Citrus Sinensis ID: 025315


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250----
MPLTTANFSICPSIFLRRIRVRSPSPKFPPRFSQFSISRPNLTSPSAAMLLPQNPVLSDVCASAVSAAVAASCLRLWEETARRDLFDQKLNRKLVHISIGLIFMLCWPLFSSGPRGAILASLTPGVNIIRMLLVGSGMWKDEATVKSMSRYGDRRELLTGPLYYAITITLACVIYWRNSPNGIAAICNLCAGDGFADVVGRRFGKRKLPYNQNKSIAGSCAMASAGFLSSIGSRHQVSSAMGKQKKISSSAEAE
cccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHccccccccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHcHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHccc
ccccccccccccHHHHEEccccccccccccccccccccccccccccHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHEEHHHHHHHHHEHHHcccccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHccHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEcEEEEcc
mplttanfsicpsiflrrirvrspspkfpprfsqfsisrpnltspsaamllpqnpvlsdVCASAVSAAVAASCLRLWEETARRDLFDQKLNRKLVHISIGLIFMLcwplfssgprgailasltpGVNIIRMLLVgsgmwkdeATVKSMSrygdrrelltgPLYYAITITLACVIYWRNSPNGIAAICNLcagdgfadvvgrrfgkrklpynqnksiagscaMASAGFLSSIGSRHqvssamgkqkkisssaeae
mplttanfsicpsiflRRIRVRSPSPKFPPRFSQFSISRPNLTSPSAAMLLPQNPVLSDVCASAVSAAVAASCLRLWEETARRDLFDQKLNRKLVHISIGLIFMLCWPLFSSGPRGAILASLTPGVNIIRMLLVGSGMWKDEATVKSMSRYGDRRELLTGPLYYAITITLACVIYWRNSPNGIAAICNLCAGDGFADVVGRRFGKRKLPYNQNKSIAGSCAMASAGFLSSIGSRHqvssamgkqkkisssaeae
MPLTTANFSICPSIFLRRIrvrspspkfpprfsqfsISRPNLTSPSAAMLLPQNPVLSDvcasavsaavaascLRLWEETARRDLFDQKLNRKLVHISIGLIFMLCWPLFSSGPRGAILASLTPGVNIIRMLLVGSGMWKDEATVKSMSRYGDRRELLTGPLYYAITITLACVIYWRNSPNGIAAICNLCAGDGFADVVGRRFGKRKLPYNQNKSIAGSCAMASAGFLSSIGSRHQVSSAMGKQKKISSSAEAE
*****ANFSICPSIFLRRIRV*****************************LPQNPVLSDVCASAVSAAVAASCLRLWEETARRDLFDQKLNRKLVHISIGLIFMLCWPLFSSGPRGAILASLTPGVNIIRMLLVGSGMWKDEATVKSMSRYGDRRELLTGPLYYAITITLACVIYWRNSPNGIAAICNLCAGDGFADVVGRRFGKRKLPYNQNKSIAGSCAMASAGF***************************
***T**NFSICPSI****************************TSPSAAMLLPQNPVLSDVCASAVSAAVAASCLRLWEETARRDLFDQKLNRKLVHISIGLIFMLCWPLFSSGPRGAILASLTPGVNIIRMLLVGSGMWKDEATVKSMSRYGDRRELLTGPLYYAITITLACVIYWRNSPNGIAAICNLCAGDGFADVVGRRFGKRKLPYNQNKSIAGSCAMASAGFLSSIGSRHQVSSAMGKQKKISSSAEAE
MPLTTANFSICPSIFLRRIRVRSPSPKFPPRFSQFSISRPNLTSPSAAMLLPQNPVLSDVCASAVSAAVAASCLRLWEETARRDLFDQKLNRKLVHISIGLIFMLCWPLFSSGPRGAILASLTPGVNIIRMLLVGSGMWKDEATVKSMSRYGDRRELLTGPLYYAITITLACVIYWRNSPNGIAAICNLCAGDGFADVVGRRFGKRKLPYNQNKSIAGSCAMASAGFLSSIG**********************
MPLTTANFSICPSIFLRRIRVRSPS**FPPRFSQFSISRPNLTSPSAAMLLPQNPVLSDVCASAVSAAVAASCLRLWEETARRDLFDQKLNRKLVHISIGLIFMLCWPLFSSGPRGAILASLTPGVNIIRMLLVGSGMWKDEATVKSMSRYGDRRELLTGPLYYAITITLACVIYWRNSPNGIAAICNLCAGDGFADVVGRRFGKRKLPYNQNKSIAGSCAMASAGFLSSIGSRHQVSSAMGKQKKISSSAEA*
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MPLTTANFSICPSIFLRRIRVRSPSPKFPPRFSQFSISRPNLTSPSAAMLLPQNPVLSDVCASAVSAAVAASCLRLWEETARRDLFDQKLNRKLVHISIGLIFMLCWPLFSSGPRGAILASLTPGVNIIRMLLVGSGMWKDEATVKSMSRYGDRRELLTGPLYYAITITLACVIYWRNSPNGIAAICNLCAGDGFADVVGRRFGKRKLPYNQNKSIAGSCAMASAGFLSSIGSRHQVSSAMGKQKKISSSAEAE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query254 2.2.26 [Sep-21-2011]
Q67ZM7307 Probable phytol kinase 2, yes no 0.909 0.752 0.579 2e-75
Q2N2K0319 Probable phytol kinase 3, yes no 0.767 0.611 0.676 1e-73
Q5N9J9304 Probable phytol kinase 2, yes no 0.712 0.595 0.646 1e-64
Q2N2K1302 Probable phytol kinase 1, no no 0.814 0.685 0.402 2e-43
Q2N2K4303 Probable phytol kinase, c N/A no 0.677 0.567 0.430 2e-36
Q2N2K3300 Probable phytol kinase, c N/A no 0.688 0.583 0.457 1e-35
Q9LZ76304 Phytol kinase 1, chloropl no no 0.732 0.611 0.392 1e-35
Q7XR51314 Probable phytol kinase 1, no no 0.685 0.554 0.448 2e-35
Q2N2K2292 Probable phytol kinase 2, no no 0.633 0.551 0.401 2e-31
>sp|Q67ZM7|PHYK2_ARATH Probable phytol kinase 2, chloroplastic OS=Arabidopsis thaliana GN=At5g58560 PE=2 SV=2 Back     alignment and function desciption
 Score =  281 bits (720), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 138/238 (57%), Positives = 173/238 (72%), Gaps = 7/238 (2%)

Query: 2   PLTTANFSICPSIFLRRIRVRSPSPKFPPRFSQFSISRPNLTSPSAAMLLPQNPVLSDVC 61
           P + A FS  P     RI   + S +   RF    I + +L    AA++ P+N VLSDVC
Sbjct: 26  PPSLAFFSPIPRFLTVRI---ATSFRSSSRFPATKIRKSSL----AAVMFPENSVLSDVC 78

Query: 62  ASAVSAAVAASCLRLWEETARRDLFDQKLNRKLVHISIGLIFMLCWPLFSSGPRGAILAS 121
           A  V++ VA SCL  W E  +R +FDQKL RKLVHI+IGL+FMLCWPLFSSG +GA+ AS
Sbjct: 79  AFGVTSIVAFSCLGFWGEIGKRGIFDQKLIRKLVHINIGLVFMLCWPLFSSGIQGALFAS 138

Query: 122 LTPGVNIIRMLLVGSGMWKDEATVKSMSRYGDRRELLTGPLYYAITITLACVIYWRNSPN 181
           L PG+NI+RMLL+G G++ DE T+KSMSR+GDRRELL GPLYY ++IT AC+ YW++SP 
Sbjct: 139 LVPGLNIVRMLLLGLGVYHDEGTIKSMSRHGDRRELLKGPLYYVLSITSACIYYWKSSPI 198

Query: 182 GIAAICNLCAGDGFADVVGRRFGKRKLPYNQNKSIAGSCAMASAGFLSSIGSRHQVSS 239
            IA ICNLCAGDG AD+VGRRFG  KLPYN+NKS AGS  MA+AGFL+S+   +  +S
Sbjct: 199 AIAVICNLCAGDGMADIVGRRFGTEKLPYNKNKSFAGSIGMATAGFLASVAYMYYFAS 256




Involved in the activation and reutilization of phytol from chlorophyll degradation in plant metabolism, including tocopherol biosynthesis. Catalyzes the conversion of phytol to phytolmonophosphate (PMP).
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: -EC: .EC: -
>sp|Q2N2K0|PHYK3_SOYBN Probable phytol kinase 3, chloroplastic OS=Glycine max PE=2 SV=1 Back     alignment and function description
>sp|Q5N9J9|PHYK2_ORYSJ Probable phytol kinase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0832000 PE=2 SV=3 Back     alignment and function description
>sp|Q2N2K1|PHYK1_SOYBN Probable phytol kinase 1, chloroplastic OS=Glycine max PE=2 SV=1 Back     alignment and function description
>sp|Q2N2K4|PHYK_MAIZE Probable phytol kinase, chloroplastic OS=Zea mays PE=2 SV=1 Back     alignment and function description
>sp|Q2N2K3|PHYK_WHEAT Probable phytol kinase, chloroplastic OS=Triticum aestivum PE=2 SV=1 Back     alignment and function description
>sp|Q9LZ76|PHYK1_ARATH Phytol kinase 1, chloroplastic OS=Arabidopsis thaliana GN=VTE5 PE=1 SV=1 Back     alignment and function description
>sp|Q7XR51|PHYK1_ORYSJ Probable phytol kinase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=Os04g0670700 PE=2 SV=1 Back     alignment and function description
>sp|Q2N2K2|PHYK2_SOYBN Probable phytol kinase 2, chloroplastic OS=Glycine max PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query254
255551200304 Phytol kinase 1, chloroplast precursor, 0.748 0.625 0.742 1e-80
224103907241 predicted protein [Populus trichocarpa] 0.771 0.813 0.698 7e-79
224059822244 predicted protein [Populus trichocarpa] 0.732 0.762 0.736 5e-78
224103909241 predicted protein [Populus trichocarpa] 0.771 0.813 0.695 1e-76
449455009322 PREDICTED: probable phytol kinase 2, chl 0.834 0.658 0.665 3e-76
325516266293 phytol kinase [Solanum pennellii] 0.862 0.747 0.609 6e-75
359478755309 PREDICTED: probable phytol kinase 2, chl 0.834 0.686 0.653 2e-74
21593148307 unknown [Arabidopsis thaliana] 0.909 0.752 0.584 3e-74
51970322307 unknown protein [Arabidopsis thaliana] 0.909 0.752 0.584 9e-74
15237702307 putative phytol kinase 2 [Arabidopsis th 0.909 0.752 0.579 1e-73
>gi|255551200|ref|XP_002516647.1| Phytol kinase 1, chloroplast precursor, putative [Ricinus communis] gi|223544219|gb|EEF45742.1| Phytol kinase 1, chloroplast precursor, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  305 bits (781), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 141/190 (74%), Positives = 166/190 (87%)

Query: 42  LTSPSAAMLLPQNPVLSDVCASAVSAAVAASCLRLWEETARRDLFDQKLNRKLVHISIGL 101
           L S   A +L QNP++SD+CA+ +S A+A S LRLW+ETA R +FDQKLNRKLVHISIGL
Sbjct: 56  LRSAVRATMLHQNPIVSDLCATGLSGAIALSVLRLWKETAIRGIFDQKLNRKLVHISIGL 115

Query: 102 IFMLCWPLFSSGPRGAILASLTPGVNIIRMLLVGSGMWKDEATVKSMSRYGDRRELLTGP 161
           +FMLCWPLFSSG +GAILA+LTPGVNI RMLL+G G+WKDEATVKSMSR+GD RELL GP
Sbjct: 116 VFMLCWPLFSSGHQGAILAALTPGVNIFRMLLLGLGIWKDEATVKSMSRFGDHRELLKGP 175

Query: 162 LYYAITITLACVIYWRNSPNGIAAICNLCAGDGFADVVGRRFGKRKLPYNQNKSIAGSCA 221
           LYYA+TITLAC IYWR SP  IAAICNLCAGDG AD+VGRRFG++K+PYN++KSIAGS A
Sbjct: 176 LYYALTITLACAIYWRTSPIAIAAICNLCAGDGIADIVGRRFGRQKIPYNRDKSIAGSIA 235

Query: 222 MASAGFLSSI 231
           MA AGF++S+
Sbjct: 236 MALAGFIASV 245




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224103907|ref|XP_002313238.1| predicted protein [Populus trichocarpa] gi|222849646|gb|EEE87193.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224059822|ref|XP_002299996.1| predicted protein [Populus trichocarpa] gi|222847254|gb|EEE84801.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224103909|ref|XP_002313239.1| predicted protein [Populus trichocarpa] gi|224103911|ref|XP_002313240.1| predicted protein [Populus trichocarpa] gi|222849647|gb|EEE87194.1| predicted protein [Populus trichocarpa] gi|222849648|gb|EEE87195.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449455009|ref|XP_004145246.1| PREDICTED: probable phytol kinase 2, chloroplastic-like [Cucumis sativus] gi|449472865|ref|XP_004153718.1| PREDICTED: probable phytol kinase 2, chloroplastic-like [Cucumis sativus] gi|449530855|ref|XP_004172407.1| PREDICTED: probable phytol kinase 2, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|325516266|gb|ADZ24711.1| phytol kinase [Solanum pennellii] Back     alignment and taxonomy information
>gi|359478755|ref|XP_002278580.2| PREDICTED: probable phytol kinase 2, chloroplastic-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|21593148|gb|AAM65097.1| unknown [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|51970322|dbj|BAD43853.1| unknown protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|15237702|ref|NP_200664.1| putative phytol kinase 2 [Arabidopsis thaliana] gi|92039771|sp|Q67ZM7.2|PHYK2_ARATH RecName: Full=Probable phytol kinase 2, chloroplastic; Flags: Precursor gi|51970576|dbj|BAD43980.1| unknown protein [Arabidopsis thaliana] gi|332009686|gb|AED97069.1| putative phytol kinase 2 [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query254
TAIR|locus:2178768307 FOLK "AT5G58560" [Arabidopsis 0.771 0.638 0.607 1.1e-62
TAIR|locus:2184447304 VTE5 "AT5G04490" [Arabidopsis 0.732 0.611 0.376 4.1e-33
DICTYBASE|DDB_G0272380223 DDB_G0272380 [Dictyostelium di 0.566 0.645 0.397 1.6e-22
TAIR|locus:2178768 FOLK "AT5G58560" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 640 (230.4 bits), Expect = 1.1e-62, P = 1.1e-62
 Identities = 119/196 (60%), Positives = 147/196 (75%)

Query:    44 SPSAAMLLPQNPVLSDXXXXXXXXXXXXXXLRLWEETARRDLFDQKLNRKLVHISIGLIF 103
             S  AA++ P+N VLSD              L  W E  +R +FDQKL RKLVHI+IGL+F
Sbjct:    61 SSLAAVMFPENSVLSDVCAFGVTSIVAFSCLGFWGEIGKRGIFDQKLIRKLVHINIGLVF 120

Query:   104 MLCWPLFSSGPRGAILASLTPGVNIIRMLLVGSGMWKDEATVKSMSRYGDRRELLTGPLY 163
             MLCWPLFSSG +GA+ ASL PG+NI+RMLL+G G++ DE T+KSMSR+GDRRELL GPLY
Sbjct:   121 MLCWPLFSSGIQGALFASLVPGLNIVRMLLLGLGVYHDEGTIKSMSRHGDRRELLKGPLY 180

Query:   164 YAITITLACVIYWRNSPNGIAAICNLCAGDGFADVVGRRFGKRKLPYNQNKSIAGSCAMA 223
             Y ++IT AC+ YW++SP  IA ICNLCAGDG AD+VGRRFG  KLPYN+NKS AGS  MA
Sbjct:   181 YVLSITSACIYYWKSSPIAIAVICNLCAGDGMADIVGRRFGTEKLPYNKNKSFAGSIGMA 240

Query:   224 SAGFLSSIGSRHQVSS 239
             +AGFL+S+   +  +S
Sbjct:   241 TAGFLASVAYMYYFAS 256




GO:0004605 "phosphatidate cytidylyltransferase activity" evidence=ISS
GO:0008654 "phospholipid biosynthetic process" evidence=ISS
GO:0009507 "chloroplast" evidence=ISM
GO:0016020 "membrane" evidence=IEA;ISS
GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA
GO:0006720 "isoprenoid metabolic process" evidence=IDA
GO:0009737 "response to abscisic acid stimulus" evidence=IMP
GO:0016487 "farnesol metabolic process" evidence=IMP
GO:0048440 "carpel development" evidence=IMP
GO:0052668 "farnesol kinase activity" evidence=IDA
GO:0052669 "CTP:2-trans,-6-trans-farnesol kinase activity" evidence=IDA
GO:0052670 "geraniol kinase activity" evidence=IDA
GO:0052671 "geranylgeraniol kinase activity" evidence=IDA
GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA
GO:0016926 "protein desumoylation" evidence=RCA
GO:0050665 "hydrogen peroxide biosynthetic process" evidence=RCA
TAIR|locus:2184447 VTE5 "AT5G04490" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0272380 DDB_G0272380 [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q67ZM7PHYK2_ARATH2, ., 7, ., -, ., -0.57980.90940.7524yesno
Q2N2K0PHYK3_SOYBN2, ., 7, ., -, ., -0.67690.76770.6112yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
gw1.I.2196.1
hypothetical protein (244 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query254
COG0170216 COG0170, SEC59, Dolichol kinase [Lipid metabolism] 1e-12
pfam01148259 pfam01148, CTP_transf_1, Cytidylyltransferase fami 1e-05
>gnl|CDD|223248 COG0170, SEC59, Dolichol kinase [Lipid metabolism] Back     alignment and domain information
 Score = 64.7 bits (158), Expect = 1e-12
 Identities = 41/157 (26%), Positives = 63/157 (40%), Gaps = 15/157 (9%)

Query: 85  LFDQKLNRKLVHISIGLIFML--CWPLFS-SGPRGAILASLTPGVNIIRMLLVGSGMWKD 141
               ++ RKL+HIS GL+F+L      F+       +L  L     + R+L+ G     +
Sbjct: 14  DTRLEVRRKLLHISGGLLFLLYILRDKFAIILFLLILLIILLLEFELFRLLIPG----LE 69

Query: 142 EATVKSMSRYG-------DRRELLTGPLYYAITITLACVIYWRNSPNGIAAICNLCAGDG 194
                 +S          ++     G + Y I   L            IA I  L  GDG
Sbjct: 70  GKVTLLLSELLSLIEREREKNGPGLGGIIYFIGGGLL-ASLLFPIEVAIAGILVLALGDG 128

Query: 195 FADVVGRRFGKRKLPYNQNKSIAGSCAMASAGFLSSI 231
            A ++G+R+G+ K      KS+ GS A   A FL  +
Sbjct: 129 LASIIGKRYGRHKRILGNGKSLEGSLAFFIASFLVLL 165


Length = 216

>gnl|CDD|216329 pfam01148, CTP_transf_1, Cytidylyltransferase family Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 254
KOG4453269 consensus Predicted ER membrane protein [Function 99.95
COG0170216 SEC59 Dolichol kinase [Lipid metabolism] 99.81
PF01148259 CTP_transf_1: Cytidylyltransferase family; InterPr 99.72
KOG2468510 consensus Dolichol kinase [Lipid transport and met 99.66
PRK11624285 cdsA CDP-diglyceride synthase; Provisional 99.31
COG0575265 CdsA CDP-diglyceride synthetase [Lipid metabolism] 99.01
PLN02953403 phosphatidate cytidylyltransferase 98.87
PLN02594 342 phosphatidate cytidylyltransferase 98.83
KOG1440 432 consensus CDP-diacylglycerol synthase [Lipid trans 97.9
COG4589303 Predicted CDP-diglyceride synthetase/phosphatidate 97.82
PRK04032159 hypothetical protein; Provisional 96.97
TIGR00297237 conserved hypothetical protein TIGR00297. 93.26
PF01940226 DUF92: Integral membrane protein DUF92; InterPro: 92.16
COG1836247 Predicted membrane protein [Function unknown] 91.21
PF01864175 DUF46: Putative integral membrane protein DUF46; I 87.31
>KOG4453 consensus Predicted ER membrane protein [Function unknown] Back     alignment and domain information
Probab=99.95  E-value=9.8e-29  Score=215.53  Aligned_cols=164  Identities=32%  Similarity=0.567  Sum_probs=143.9

Q ss_pred             CcchhhHHHHHHHHHHHHHHHHHHHHHHhccccCCccchhHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHH
Q 025315           54 NPVLSDVCASAVSAAVAASCLRLWEETARRDLFDQKLNRKLVHISIGLIFMLCWPLFSSGPRGAILASLTPGVNIIRMLL  133 (254)
Q Consensus        54 ~~~~~d~~~~~~~~~~~~~~l~~~e~l~~r~~~~~e~~RKlvHi~~Glv~~l~~~~f~~~~~~~~la~l~~~l~~lr~~~  133 (254)
                      +.+.||++..+....+.+.++.+++...++..+++.+.||++|+..|.++.+.||+|+                  |+..
T Consensus        60 ns~kheiprkv~hssigf~~l~l~g~g~kr~~i~~~Li~kfi~ifigdlirlnWP~Fs------------------rLy~  121 (269)
T KOG4453|consen   60 NSLKHEIPRKVAHSSIGFALLLLFGSGTKRNVIQQSLIRKFIHIFIGDLIRLNWPIFS------------------RLYI  121 (269)
T ss_pred             hhhhhhhchhHhhhhHHHHHHHHHhcccchhhhhHHHHHHHHHHHHhHHHHhccHHHH------------------HHHH
Confidence            6789999999999999999999999999999999999999999999999999999886                  3333


Q ss_pred             hhcccccchhhhhhcccccccccccchhHHHHHHHHHHHHHHhcCCchHHHHHHHHHhchhhhhhhccccCccccCCCCC
Q 025315          134 VGSGMWKDEATVKSMSRYGDRRELLTGPLYYAITITLACVIYWRNSPNGIAAICNLCAGDGFADVVGRRFGKRKLPYNQN  213 (254)
Q Consensus       134 ~gl~~~~~~~~i~~~~R~~e~~~~l~G~lyy~l~~~l~~~lfw~~~pi~i~aIl~L~~GDg~AalVG~~fGr~klp~~~~  213 (254)
                      .+++...++     ++|     +.++|++||.+++.....+||.+.|++.+.++.+|  |+.|++||||||+.|.|++++
T Consensus       122 r~lg~lmre-----~er-----hl~nGvLfYvLgl~fs~~ff~kespi~s~~Llswc--Dt~AdtvGRKfG~~tpk~akn  189 (269)
T KOG4453|consen  122 RGLGILMRE-----VER-----HLLNGVLFYVLGLLFSAVFFWKESPIGSISLLSWC--DTIADTVGRKFGSTTPKYAKN  189 (269)
T ss_pred             hcccccchH-----HHH-----HHhcchHHHHHHHHHHhhccccccHHHHHHHHHHh--hhHHHHHhhhccccCCCcCCC
Confidence            334433322     332     36799999999999999999999988877777766  999999999999999999999


Q ss_pred             CceehhHHHHHHHHHHHHHHHHhhhccc--hhhhhh
Q 025315          214 KSIAGSCAMASAGFLSSIGSRHQVSSAM--GKQKKI  247 (254)
Q Consensus       214 KS~EGSla~fv~s~l~~~~~l~~f~~~g--~~~~~~  247 (254)
                      |||+||++||.+++.+++.+++||.+.|  ++|..+
T Consensus       190 KSlAGSIgaft~Gvf~c~vy~gyf~s~g~~~l~~s~  225 (269)
T KOG4453|consen  190 KSLAGSIGAFTFGVFICIVYLGYFSSLGPDYLHMSW  225 (269)
T ss_pred             ccccchHHHHHHHHHHHHHHHHHHhccCcchhcccc
Confidence            9999999999999999999999999999  888765



>COG0170 SEC59 Dolichol kinase [Lipid metabolism] Back     alignment and domain information
>PF01148 CTP_transf_1: Cytidylyltransferase family; InterPro: IPR000374 Phosphatidate cytidylyltransferase (2 Back     alignment and domain information
>KOG2468 consensus Dolichol kinase [Lipid transport and metabolism] Back     alignment and domain information
>PRK11624 cdsA CDP-diglyceride synthase; Provisional Back     alignment and domain information
>COG0575 CdsA CDP-diglyceride synthetase [Lipid metabolism] Back     alignment and domain information
>PLN02953 phosphatidate cytidylyltransferase Back     alignment and domain information
>PLN02594 phosphatidate cytidylyltransferase Back     alignment and domain information
>KOG1440 consensus CDP-diacylglycerol synthase [Lipid transport and metabolism] Back     alignment and domain information
>COG4589 Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase [General function prediction only] Back     alignment and domain information
>PRK04032 hypothetical protein; Provisional Back     alignment and domain information
>TIGR00297 conserved hypothetical protein TIGR00297 Back     alignment and domain information
>PF01940 DUF92: Integral membrane protein DUF92; InterPro: IPR002794 Many members of this family have no known function and are predicted to be integral membrane proteins Back     alignment and domain information
>COG1836 Predicted membrane protein [Function unknown] Back     alignment and domain information
>PF01864 DUF46: Putative integral membrane protein DUF46; InterPro: IPR002726 This archaebacterial protein has no known function Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query254
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 41.0 bits (95), Expect = 3e-04
 Identities = 30/201 (14%), Positives = 62/201 (30%), Gaps = 60/201 (29%)

Query: 18  RIRVRSPSPKFPPRFSQFSISRPNLTSPSAAMLLPQNPVLSDVCASAVSAAVAASCLRLW 77
            I++R  S +      +   S+P         LL    VL +V  +    A   SC ++ 
Sbjct: 222 NIKLRIHSIQ--AELRRLLKSKPYENC-----LL----VLLNVQNAKAWNAFNLSC-KIL 269

Query: 78  EETARRDLFDQKLNRKLVHISI-----GL-------IFMLC-WPLFSSGPRGAILASLTP 124
             T  + + D        HIS+      L       + +          PR  +  +  P
Sbjct: 270 LTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTN--P 327

Query: 125 -GVNII-RMLLVGSGMWKD-------------EATVKSMSRYGDRRELLTGPLYYAITI- 168
             ++II   +  G   W +             E+++  +     R+      ++  +++ 
Sbjct: 328 RRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRK------MFDRLSVF 381

Query: 169 ---------TLACVIYWRNSP 180
                     L   + W +  
Sbjct: 382 PPSAHIPTILL--SLIWFDVI 400


Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00