Citrus Sinensis ID: 025961

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-----
MILPWNEYPILSHGNHISQTPSHSQTLPESDTIGCMACNINISIRCSTDTPRFAATCQLQLDSRNPRSPLLLKLLPSPALTQRPNKIAYSSYTPRRSYVTVRSHMATEEKSISGDRMLVFVPPHPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASSILPAIKTYHLGKVVLMHACIVDEVSLGLRFRLVITLEV
cccccccccccccccccccccccccccccccccEEEEEEccccEEEcccccccccccHHHHHcccccccccccccccccccccccccccccccccccEEEEccccccccccccccccEEEEccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccccccEEEEEccccEEEEEEEcccccEEEEEEccccHHHHHHHHccccccEEEEEEEEEHHHHHHHHHccccccccEEEEEcc
cccccccccEEcccccccccccccccccccccEEEEEEcccccEEccccccccHHHcccccccccccccccccccccccHcccccccccccccccccHHEEHHHHHcccccccccccEEEEcccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccHccccccEEEEcccccEEEEEEcccccEEEEHHHHHcHHHHHHHHHHcHHHHHcHHHHEHHHHHHEEHEEEccEEEEEEEEEEc
milpwneypilshgnhisqtpshsqtlpesdtigcmacninisircstdtprfaATCQLqldsrnprsplllkllpspaltqrpnkiayssytprrsyvTVRSHMAteeksisgdrmlvfvpphpliKHWVSILRneqtpcpiFRNAMAELGRLLMYEAsrdwlptvsgeiqspmgvasvefidprepvavIPILRAGLVLVEHAssilpaiktyHLGKVVLMHACIVDEVSLGLRFRLVITLEV
MILPWNEYPILSHGNHISQTPSHSQTLPESDTIGCMACNINISIRCSTDTPRFAATCQLQLDSRNPRSPLLLKLlpspaltqrpnkiayssytprrsyvTVRSHMATEeksisgdrmLVFVPPHPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASSILPAIKTYHLGKVVLMHACIVDEVSLGLRFRLVITLEV
MILPWNEYPILSHGNHISQTPSHSQTLPESDTIGCMACNINISIRCSTDTPRFAATCQLQLDSRNprsplllkllpspalTQRPNKIAYSSYTPRRSYVTVRSHMATEEKSISGDRMLVFVPPHPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASSILPAIKTYHLGKVVLMHACIVDEVSLGLRFRLVITLEV
*******YPI*********************TIGCMACNINISIRCSTDTPRFAATCQLQL*********LLKL************IAYSSYT**RSYVTVR*********ISGDRMLVFVPPHPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASSILPAIKTYHLGKVVLMHACIVDEVSLGLRFRLVITL**
MILPWNEYPILSHGNH**************DTIGCMACNINISIRCSTDTPRFAATCQ*************LKLLPSPALT**************************************FVPPHPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASSILPAIKTYHLGKVVLMHACIVDEVSLGLRFRLVITLEV
MILPWNEYPILSHGNHI***********ESDTIGCMACNINISIRCSTDTPRFAATCQLQLDSRNPRSPLLLKLLPSPALTQRPNKIAYSSYTPRRSYVTVRSHMATEEKSISGDRMLVFVPPHPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASSILPAIKTYHLGKVVLMHACIVDEVSLGLRFRLVITLEV
MILPWNEYPILSH**********S*TLPESDTIGCMACNINISIRCSTDTPRFAATCQLQLD*********LKLLPSPALTQRPNKIAY*SYTPRRSYVTVRSHMATEEKSISGDRMLVFVPPHPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASSILPAIKTYHLGKVVLMHACIVDEVSLGLRFRLVITLEV
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MILPWNEYPILSHGNHISQTPSHSQTLPESDTIGCMACNINISIRCSTDTPRFAATCQLQLDSRNPRSPLLLKLLPSPALTQRPNKIAYSSYTPRRSYVTVRSHMATEEKSISGDRMLVFVPPHPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASSILPAIKTYHLGKVVLMHACIVDEVSLGLRFRLVITLEV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query245 2.2.26 [Sep-21-2011]
Q9M336296 Uracil phosphoribosyltran yes no 0.726 0.601 0.664 4e-60
P93394224 Uracil phosphoribosyltran N/A no 0.465 0.508 0.850 3e-55
P72753216 Uracil phosphoribosyltran N/A no 0.428 0.486 0.542 1e-29
Q5MZF4217 Uracil phosphoribosyltran yes no 0.453 0.511 0.5 2e-29
Q31MH4217 Uracil phosphoribosyltran yes no 0.453 0.511 0.5 2e-29
Q8YVB5216 Uracil phosphoribosyltran yes no 0.428 0.486 0.523 2e-27
B8E009207 Uracil phosphoribosyltran yes no 0.404 0.478 0.386 1e-14
B5YDB8207 Uracil phosphoribosyltran yes no 0.404 0.478 0.376 3e-14
Q8RD94210 Uracil phosphoribosyltran yes no 0.4 0.466 0.4 4e-14
B0K1G2210 Uracil phosphoribosyltran yes no 0.4 0.466 0.41 4e-14
>sp|Q9M336|UPP_ARATH Uracil phosphoribosyltransferase, chloroplastic OS=Arabidopsis thaliana GN=UPP PE=2 SV=1 Back     alignment and function desciption
 Score =  231 bits (588), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 123/185 (66%), Positives = 140/185 (75%), Gaps = 7/185 (3%)

Query: 36  MACNINISIRCSTDTPRFAATCQLQLDSR-NPRSPLLLKLLPSPALTQRPNKIAYSSYTP 94
           MAC+I  + RCS+DT RFA   + Q  SR NP     L    SP L Q  N  A SS   
Sbjct: 1   MACSIGNAFRCSSDTLRFAP--RQQCSSRLNPNPSSFLSFNSSPILAQ--NLGASSSSLS 56

Query: 95  RRSYVTVRSHMATEEKSISG-DRMLVFVPPHPLIKHWVSILRNEQTPCPIFRNAMAELGR 153
           RR+ +  R+ MA  E SI+G +RMLVFVPPHPLIKHW+S+LRNEQTPCP+FRNA+AELGR
Sbjct: 57  RRT-IRARTKMAASEASINGSNRMLVFVPPHPLIKHWISVLRNEQTPCPVFRNAIAELGR 115

Query: 154 LLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASSILPAIK 213
           LLMYEASR+WLPTV GEI SPMG ASVEFIDPREP+AV+PILRAGL L EHASS+LPA K
Sbjct: 116 LLMYEASREWLPTVVGEIMSPMGPASVEFIDPREPIAVVPILRAGLALAEHASSVLPANK 175

Query: 214 TYHLG 218
            YHLG
Sbjct: 176 IYHLG 180
Uracil phosphoribosyltransferase (UPRT) that catalyzes the conversion of uracil and 5-phospho-alpha-D-ribose 1-diphosphate (PRPP) to UMP and diphosphate. Is probably the only functional UPRT, since the dual-domain proteins of the UKL family seem to lack this activity.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 2EC: .EC: 9
>sp|P93394|UPP_TOBAC Uracil phosphoribosyltransferase OS=Nicotiana tabacum GN=UPP PE=2 SV=1 Back     alignment and function description
>sp|P72753|UPP_SYNY3 Uracil phosphoribosyltransferase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=upp PE=3 SV=1 Back     alignment and function description
>sp|Q5MZF4|UPP_SYNP6 Uracil phosphoribosyltransferase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=upp PE=3 SV=1 Back     alignment and function description
>sp|Q31MH4|UPP_SYNE7 Uracil phosphoribosyltransferase OS=Synechococcus elongatus (strain PCC 7942) GN=upp PE=3 SV=1 Back     alignment and function description
>sp|Q8YVB5|UPP_NOSS1 Uracil phosphoribosyltransferase OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=upp PE=3 SV=1 Back     alignment and function description
>sp|B8E009|UPP_DICTD Uracil phosphoribosyltransferase OS=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) GN=upp PE=3 SV=1 Back     alignment and function description
>sp|B5YDB8|UPP_DICT6 Uracil phosphoribosyltransferase OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=upp PE=3 SV=1 Back     alignment and function description
>sp|Q8RD94|UPP_THETN Uracil phosphoribosyltransferase OS=Thermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) GN=upp PE=3 SV=1 Back     alignment and function description
>sp|B0K1G2|UPP_THEPX Uracil phosphoribosyltransferase OS=Thermoanaerobacter sp. (strain X514) GN=upp PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query245
225440492276 PREDICTED: uracil phosphoribosyltransfer 0.677 0.601 0.644 2e-59
388496258294 unknown [Lotus japonicus] 0.538 0.448 0.842 7e-59
21536984296 uracil phosphoribosyltransferase-like pr 0.726 0.601 0.664 2e-58
15232358296 uracil phosphoribosyltransferase [Arabid 0.726 0.601 0.664 2e-58
363806684286 uncharacterized protein LOC100797537 [Gl 0.710 0.608 0.666 4e-58
255577989243 uracil phosphoribosyltransferase, putati 0.506 0.510 0.849 1e-57
297820126295 hypothetical protein ARALYDRAFT_323928 [ 0.726 0.603 0.652 2e-57
363807554289 uncharacterized protein LOC100797953 [Gl 0.722 0.612 0.672 3e-57
449448596289 PREDICTED: uracil phosphoribosyltransfer 0.722 0.612 0.653 2e-55
448278957224 uracil phsophoribosyltransferase [Solanu 0.465 0.508 0.859 1e-54
>gi|225440492|ref|XP_002273489.1| PREDICTED: uracil phosphoribosyltransferase [Vitis vinifera] gi|297740307|emb|CBI30489.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  234 bits (597), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 118/183 (64%), Positives = 136/183 (74%), Gaps = 17/183 (9%)

Query: 36  MACNINISIRCSTDTPRFAATCQLQLDSRNPRSPLLLKLLPSPALTQRPNKIAYSSYTPR 95
           MAC IN  +RC  D P  + TC+ Q                S  + Q P  I+YS++  R
Sbjct: 1   MACCINFPLRCQFDGPILSPTCKPQ----------------SIRIHQVPQMISYSNHR-R 43

Query: 96  RSYVTVRSHMATEEKSISGDRMLVFVPPHPLIKHWVSILRNEQTPCPIFRNAMAELGRLL 155
           R  +T  S   ++ +S+  ++MLVFVPPHPLIKHWVS+LRNEQTPCPIFRNAMAELGRLL
Sbjct: 44  RCLITAMSQTTSDNRSLPDEKMLVFVPPHPLIKHWVSVLRNEQTPCPIFRNAMAELGRLL 103

Query: 156 MYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASSILPAIKTY 215
           MYEASRDWLPTV GEIQSPMGVASVEFIDPREPVAV+PILRAGL L+E+ASSILPA KTY
Sbjct: 104 MYEASRDWLPTVKGEIQSPMGVASVEFIDPREPVAVVPILRAGLALMEYASSILPATKTY 163

Query: 216 HLG 218
           HLG
Sbjct: 164 HLG 166

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|388496258|gb|AFK36195.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|21536984|gb|AAM61325.1| uracil phosphoribosyltransferase-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|15232358|ref|NP_190958.1| uracil phosphoribosyltransferase [Arabidopsis thaliana] gi|75335865|sp|Q9M336.1|UPP_ARATH RecName: Full=Uracil phosphoribosyltransferase, chloroplastic; Short=UPRTase; AltName: Full=UMP pyrophosphorylase; Flags: Precursor gi|7630010|emb|CAB88352.1| uracil phosphoribosyltransferase-like protein [Arabidopsis thaliana] gi|15810301|gb|AAL07038.1| putative uracil phosphoribosyltransferase [Arabidopsis thaliana] gi|21281024|gb|AAM45046.1| putative uracil phosphoribosyltransferase [Arabidopsis thaliana] gi|332645636|gb|AEE79157.1| uracil phosphoribosyltransferase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|363806684|ref|NP_001242264.1| uncharacterized protein LOC100797537 [Glycine max] gi|255641308|gb|ACU20931.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|255577989|ref|XP_002529866.1| uracil phosphoribosyltransferase, putative [Ricinus communis] gi|223530642|gb|EEF32516.1| uracil phosphoribosyltransferase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|297820126|ref|XP_002877946.1| hypothetical protein ARALYDRAFT_323928 [Arabidopsis lyrata subsp. lyrata] gi|297323784|gb|EFH54205.1| hypothetical protein ARALYDRAFT_323928 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|363807554|ref|NP_001241892.1| uncharacterized protein LOC100797953 [Glycine max] gi|255642104|gb|ACU21318.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|449448596|ref|XP_004142052.1| PREDICTED: uracil phosphoribosyltransferase-like [Cucumis sativus] gi|449526152|ref|XP_004170078.1| PREDICTED: uracil phosphoribosyltransferase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|448278957|gb|AGE44324.1| uracil phsophoribosyltransferase [Solanum tuberosum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query245
TAIR|locus:2084385296 UPP "uracil phosphoribosyltran 0.726 0.601 0.637 4.3e-54
TIGR_CMR|BA_5557209 BA_5557 "uracil phosphoribosyl 0.4 0.468 0.36 3.9e-12
ASPGD|ASPL0000050022 237 AN2133 [Emericella nidulans (t 0.404 0.417 0.330 1.7e-08
UNIPROTKB|P0A658207 upp "Uracil phosphoribosyltran 0.391 0.463 0.386 6.2e-08
UNIPROTKB|P0A8F0208 upp "Upp" [Escherichia coli K- 0.379 0.447 0.326 4.5e-07
TIGR_CMR|CPS_4319208 CPS_4319 "uracil phosphoribosy 0.408 0.480 0.313 4.5e-07
TIGR_CMR|SO_2759208 SO_2759 "uracil phosphoribosyl 0.408 0.480 0.333 4.5e-07
TIGR_CMR|GSU_0933209 GSU_0933 "uracil phosphoribosy 0.371 0.435 0.316 4.7e-07
TIGR_CMR|SPO_2926210 SPO_2926 "uracil phosphoribosy 0.497 0.580 0.265 4.8e-07
TAIR|locus:2084420 571 SIGC "AT3G53920" [Arabidopsis 0.216 0.092 0.509 4.5e-06
TAIR|locus:2084385 UPP "uracil phosphoribosyltransferase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 559 (201.8 bits), Expect = 4.3e-54, P = 4.3e-54
 Identities = 118/185 (63%), Positives = 135/185 (72%)

Query:    36 MACNINISIRCSTDTPRFAATCQLQLDSR-NXXXXXXXXXXXXXXXTQRPNKIAYSSYTP 94
             MAC+I  + RCS+DT RFA   + Q  SR N                Q  N  A SS   
Sbjct:     1 MACSIGNAFRCSSDTLRFAP--RQQCSSRLNPNPSSFLSFNSSPILAQ--NLGASSSSLS 56

Query:    95 RRSYVTVRSHMATEEKSISG-DRMLVFVPPHPLIKHWVSILRNEQTPCPIFRNAMAELGR 153
             RR+ +  R+ MA  E SI+G +RMLVFVPPHPLIKHW+S+LRNEQTPCP+FRNA+AELGR
Sbjct:    57 RRT-IRARTKMAASEASINGSNRMLVFVPPHPLIKHWISVLRNEQTPCPVFRNAIAELGR 115

Query:   154 LLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASSILPAIK 213
             LLMYEASR+WLPTV GEI SPMG ASVEFIDPREP+AV+PILRAGL L EHASS+LPA K
Sbjct:   116 LLMYEASREWLPTVVGEIMSPMGPASVEFIDPREPIAVVPILRAGLALAEHASSVLPANK 175

Query:   214 TYHLG 218
              YHLG
Sbjct:   176 IYHLG 180
GO:0004845 "uracil phosphoribosyltransferase activity" evidence=IEA;ISS;IMP
GO:0006223 "uracil salvage" evidence=IEA
GO:0009116 "nucleoside metabolic process" evidence=IEA;ISS
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0016036 "cellular response to phosphate starvation" evidence=IEP
GO:0009536 "plastid" evidence=IDA
GO:0032502 "developmental process" evidence=IMP
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0005829 "cytosol" evidence=IDA
TIGR_CMR|BA_5557 BA_5557 "uracil phosphoribosyltransferase" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
ASPGD|ASPL0000050022 AN2133 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
UNIPROTKB|P0A658 upp "Uracil phosphoribosyltransferase" [Mycobacterium tuberculosis (taxid:1773)] Back     alignment and assigned GO terms
UNIPROTKB|P0A8F0 upp "Upp" [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
TIGR_CMR|CPS_4319 CPS_4319 "uracil phosphoribosyltransferase" [Colwellia psychrerythraea 34H (taxid:167879)] Back     alignment and assigned GO terms
TIGR_CMR|SO_2759 SO_2759 "uracil phosphoribosyltransferase" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_0933 GSU_0933 "uracil phosphoribosyltransferase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_2926 SPO_2926 "uracil phosphoribosyltransferase" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
TAIR|locus:2084420 SIGC "AT3G53920" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9M336UPP_ARATH2, ., 4, ., 2, ., 90.66480.72650.6013yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer2.4.2.90.824
3rd Layer2.4.20.766

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query245
PLN02541244 PLN02541, PLN02541, uracil phosphoribosyltransfera 3e-74
PRK00129209 PRK00129, upp, uracil phosphoribosyltransferase; R 2e-32
COG0035210 COG0035, Upp, Uracil phosphoribosyltransferase [Nu 1e-27
TIGR01091207 TIGR01091, upp, uracil phosphoribosyltransferase 2e-27
>gnl|CDD|215297 PLN02541, PLN02541, uracil phosphoribosyltransferase Back     alignment and domain information 
 Score =  225 bits (575), Expect = 3e-74
 Identities = 94/132 (71%), Positives = 110/132 (83%), Gaps = 2/132 (1%)

Query: 91  SYTPRRSYVTVRSH--MATEEKSISGDRMLVFVPPHPLIKHWVSILRNEQTPCPIFRNAM 148
           S + R +     S    A+E    +  +MLVFVPPHPLIKHW+S+LRNEQTP PIFR+AM
Sbjct: 4   SRSSRLTRTVRASADAAASEPSPKAPQQMLVFVPPHPLIKHWLSVLRNEQTPPPIFRSAM 63

Query: 149 AELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLVLVEHASSI 208
           AELGRLL+YEASRDWLPT++GE+Q+PMGVA VEFIDPREPVAV+PILRAGLVL+EHASS+
Sbjct: 64  AELGRLLIYEASRDWLPTMTGEVQTPMGVADVEFIDPREPVAVVPILRAGLVLLEHASSV 123

Query: 209 LPAIKTYHLGKV 220
           LPA KTYHLG V
Sbjct: 124 LPATKTYHLGFV 135

Length = 244
>gnl|CDD|234653 PRK00129, upp, uracil phosphoribosyltransferase; Reviewed Back     alignment and domain information
>gnl|CDD|223113 COG0035, Upp, Uracil phosphoribosyltransferase [Nucleotide transport and metabolism] Back     alignment and domain information
>gnl|CDD|130163 TIGR01091, upp, uracil phosphoribosyltransferase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 245
COG0035210 Upp Uracil phosphoribosyltransferase [Nucleotide t 99.98
PLN02541244 uracil phosphoribosyltransferase 99.98
PF14681207 UPRTase: Uracil phosphoribosyltransferase; PDB: 1V 99.96
TIGR01091207 upp uracil phosphoribosyltransferase. that include 99.95
PRK00129209 upp uracil phosphoribosyltransferase; Reviewed 99.95
KOG1017267 consensus Predicted uracil phosphoribosyltransfera 99.8
KOG4203473 consensus Armadillo/beta-Catenin/plakoglobin [Sign 99.31
TIGR01203166 HGPRTase hypoxanthine phosphoribosyltransferase. S 93.99
PLN02369302 ribose-phosphate pyrophosphokinase 85.62
PRK05205176 bifunctional pyrimidine regulatory protein PyrR ur 81.82
>COG0035 Upp Uracil phosphoribosyltransferase [Nucleotide transport and metabolism] Back     alignment and domain information 
Probab=99.98  E-value=1.9e-32  Score=241.48  Aligned_cols=111  Identities=39%  Similarity=0.592  Sum_probs=105.8

Q ss_pred             eEEEecCchhHHHHHHhhhcCCCCchHHHHHHHHHHHHHHHHHhcCCCCceeeeEecCCeeeEEEEecCCCCeEEEeeec
Q 025961          117 MLVFVPPHPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILR  196 (245)
Q Consensus       117 M~I~VldHPLVkh~LTiLRDk~T~~~dFR~~vdrIgrLLayEAl~~~Lp~eeveVeTPlG~t~G~~l~~~k~I~iVPILR  196 (245)
                      |++++++||+++|++|+|||++|++.+||++++||+++|+|||+++ +|+++++|+||++++++..+.+ +++|+|||||
T Consensus         2 ~~v~vi~hpli~~~lt~lRdk~t~~~~Fr~~~~ei~~lL~yEa~~~-l~~e~~~ieTP~~~~~~~~~~~-~~i~~V~ILR   79 (210)
T COG0035           2 MNVYVIDHPLVKHKLTILRDKNTGTKEFRELLDEIGRLLAYEATRD-LPLEKVEIETPLGPTEGVQIAG-KKIVIVPILR   79 (210)
T ss_pred             CceEEeCcHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhCc-CceeEEEEECCCcceeeeeecC-CcEEEEEEee
Confidence            5789999999999999999999999999999999999999999999 9999999999999999999975 5599999999


Q ss_pred             cchhHHHHHHhhcCCCceeeEEEEeeeccceec
Q 025961          197 AGLVLVEHASSILPAIKTYHLGKVVLMHACIVD  229 (245)
Q Consensus       197 AGL~MleG~l~v~P~A~VGhIGIqRd~~~~~~~  229 (245)
                      ||++|++|+++++|+|++||||+|||++.....
T Consensus        80 AGl~m~~gl~~~~P~a~vG~ig~~Rdeet~~p~  112 (210)
T COG0035          80 AGLGMVEGLLKLIPSARVGHIGIYRDEETLEPV  112 (210)
T ss_pred             ccccHHHHHHHhCCcceEEEEEEEecCccCcee
Confidence            999999999999999999999999999987754

>PLN02541 uracil phosphoribosyltransferase Back     alignment and domain information
>PF14681 UPRTase: Uracil phosphoribosyltransferase; PDB: 1V9S_B 1UPF_A 1UPU_D 1JLR_B 1BD4_A 1BD3_C 1JLS_D 1XTV_C 1XTU_H 3G6W_C Back     alignment and domain information
>TIGR01091 upp uracil phosphoribosyltransferase Back     alignment and domain information
>PRK00129 upp uracil phosphoribosyltransferase; Reviewed Back     alignment and domain information
>KOG1017 consensus Predicted uracil phosphoribosyltransferase [General function prediction only] Back     alignment and domain information
>KOG4203 consensus Armadillo/beta-Catenin/plakoglobin [Signal transduction mechanisms; Cytoskeleton] Back     alignment and domain information
>TIGR01203 HGPRTase hypoxanthine phosphoribosyltransferase Back     alignment and domain information
>PLN02369 ribose-phosphate pyrophosphokinase Back     alignment and domain information
>PRK05205 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query245
1i5e_A209 Crystal Structure Of Bacillus Caldolyticus Uracil P 5e-12
2e55_A208 Structure Of Aq2163 Protein From Aquifex Aeolicus L 3e-10
1o5o_A221 Crystal Structure Of Uracil Phosphoribosyltransfera 9e-10
1v9s_A208 Crystal Structure Of Tt0130 Protein From Thermus Th 1e-08
3dmp_A217 2.6 A Crystal Structure Of Uracil Phosphoribosyltra 2e-08
2ehj_A208 Structure Of Uracil Phosphoribosyl Transferase Leng 2e-07
1xtt_A216 Sulfolobus Solfataricus Uracil Phosphoribosyltransf 9e-05
>pdb|1I5E|A Chain A, Crystal Structure Of Bacillus Caldolyticus Uracil Phosphoribosyltransferase With Bound Ump Length = 209 Back     alignment and structure 
Iteration: 1

 Score = 67.8 bits (164), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 62/100 (62%), Gaps = 2/100 (2%)
Query: 119 VFVPPHPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVA 178
           V+V  HPLI+H ++ +R++ T    FR  + E+  L+ +E +RD LP    EI++P+  A
Sbjct: 4   VYVFDHPLIQHKLTYIRDKNTGTKEFRELVDEVATLMAFEITRD-LPLEEVEIETPVSKA 62
Query: 179 SVEFIDPREPVAVIPILRAGLVLVEHASSILPAIKTYHLG 218
             + I  ++ + VIPILRAG+ +V+    ++PA K  H+G
Sbjct: 63  RAKVIAGKK-LGVIPILRAGIGMVDGILKLIPAAKVGHIG 101
>pdb|2E55|A Chain A, Structure Of Aq2163 Protein From Aquifex Aeolicus Length = 208 Back     alignment and structure
>pdb|1O5O|A Chain A, Crystal Structure Of Uracil Phosphoribosyltransferase (Tm0721) From Thermotoga Maritima At 2.30 A Resolution Length = 221 Back     alignment and structure
>pdb|1V9S|A Chain A, Crystal Structure Of Tt0130 Protein From Thermus Thermophilus Hb8 Length = 208 Back     alignment and structure
>pdb|3DMP|A Chain A, 2.6 A Crystal Structure Of Uracil Phosphoribosyltransferase From Burkholderia Pseudomallei Length = 217 Back     alignment and structure
>pdb|2EHJ|A Chain A, Structure Of Uracil Phosphoribosyl Transferase Length = 208 Back     alignment and structure
>pdb|1XTT|A Chain A, Sulfolobus Solfataricus Uracil Phosphoribosyltransferase In Complex With Uridine 5'-Monophosphate (Ump) Length = 216 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query245
1i5e_A209 Uracil phosphoribosyltransferase; salvage pathway; 1e-26
1o5o_A221 Uracil phosphoribosyltransferase; TM0721, structur 6e-26
1bd3_D243 Uprtase, uracil phosphoribosyltransferase; glycosy 7e-26
1v9s_A208 Uracil phosphoribosyltransferase; pyrimidine salva 1e-25
2e55_A208 Uracil phosphoribosyltransferase; structural genom 2e-24
3dmp_A217 Uracil phosphoribosyltransferase; structural genom 6e-24
1xtt_A216 Probable uracil phosphoribosyltransferase; tetrame 9e-24
2ehj_A208 Uracil phosphoribosyltransferase; structural genom 4e-22
>1i5e_A Uracil phosphoribosyltransferase; salvage pathway; HET: U5P; 3.00A {Bacillus caldolyticus} SCOP: c.61.1.1 Length = 209 Back     alignment and structure
 Score =  101 bits (254), Expect = 1e-26
 Identities = 36/102 (35%), Positives = 60/102 (58%), Gaps = 2/102 (1%)

Query: 117 MLVFVPPHPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMG 176
             V+V  HPLI+H ++ +R++ T    FR  + E+  L+ +E +RD  P    EI++P+ 
Sbjct: 2   GKVYVFDHPLIQHKLTYIRDKNTGTKEFRELVDEVATLMAFEITRDL-PLEEVEIETPVS 60

Query: 177 VASVEFIDPREPVAVIPILRAGLVLVEHASSILPAIKTYHLG 218
            A  + I  ++   VIPILRAG+ +V+    ++PA K  H+G
Sbjct: 61  KARAKVIAGKKLG-VIPILRAGIGMVDGILKLIPAAKVGHIG 101
>1o5o_A Uracil phosphoribosyltransferase; TM0721, structural genomic PSI, protein structure initiative, joint center for structu genomics; HET: U5P; 2.30A {Thermotoga maritima} SCOP: c.61.1.1 Length = 221 Back     alignment and structure
>1bd3_D Uprtase, uracil phosphoribosyltransferase; glycosyltransferase; 1.93A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1bd4_D 1jlr_A* 1jls_B* 1upf_D 1upu_D* Length = 243 Back     alignment and structure
>1v9s_A Uracil phosphoribosyltransferase; pyrimidine salvage, oligomerization, structural genomics, RI structural genomics/proteomics initiative; 2.10A {Thermus thermophilus} SCOP: c.61.1.1 Length = 208 Back     alignment and structure
>2e55_A Uracil phosphoribosyltransferase; structural genomics; 2.15A {Aquifex aeolicus} Length = 208 Back     alignment and structure
>3dmp_A Uracil phosphoribosyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.60A {Burkholderia pseudomallei} Length = 217 Back     alignment and structure
>1xtt_A Probable uracil phosphoribosyltransferase; tetramer, type 1 phosphoribosyltransferase, UMP complex; HET: U5P; 1.80A {Sulfolobus solfataricus} SCOP: c.61.1.1 PDB: 1vst_A* 1xtu_A* 1xtv_A* 3g6w_A* Length = 216 Back     alignment and structure
>2ehj_A Uracil phosphoribosyltransferase; structural genomics; 2.80A {Escherichia coli} Length = 208 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query245
3dmp_A217 Uracil phosphoribosyltransferase; structural genom 99.97
1xtt_A216 Probable uracil phosphoribosyltransferase; tetrame 99.97
1v9s_A208 Uracil phosphoribosyltransferase; pyrimidine salva 99.96
2ehj_A208 Uracil phosphoribosyltransferase; structural genom 99.96
2e55_A208 Uracil phosphoribosyltransferase; structural genom 99.96
1o5o_A221 Uracil phosphoribosyltransferase; TM0721, structur 99.95
1bd3_D243 Uprtase, uracil phosphoribosyltransferase; glycosy 99.95
1i5e_A209 Uracil phosphoribosyltransferase; salvage pathway; 99.94
3hvu_A204 Hypoxanthine phosphoribosyltransferase; hypoxanthi 82.27
3ozf_A250 Hypoxanthine-guanine-xanthine phosphoribosyltrans; 82.25
3o7m_A186 Hypoxanthine phosphoribosyltransferase; hypoxanthi 82.12
3ohp_A177 Hypoxanthine phosphoribosyltransferase; structural 80.61
2ywu_A181 Hypoxanthine-guanine phosphoribosyltransferase; ro 80.38
>3dmp_A Uracil phosphoribosyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.60A {Burkholderia pseudomallei} SCOP: c.61.1.1 Back     alignment and structure
Probab=99.97  E-value=1e-30  Score=228.58  Aligned_cols=107  Identities=26%  Similarity=0.510  Sum_probs=102.6

Q ss_pred             eEEEecCchhHHHHHHhhhcCCCCchHHHHHHHHHHHHHHHHHhcCCCCceeeeEecCCeeeEEEEecCCCCeEEEeeec
Q 025961          117 MLVFVPPHPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILR  196 (245)
Q Consensus       117 M~I~VldHPLVkh~LTiLRDk~T~~~dFR~~vdrIgrLLayEAl~~~Lp~eeveVeTPlG~t~G~~l~~~k~I~iVPILR  196 (245)
                      ++|++++||+++|++|+|||++|++.+||++++||+++|+|||+++ ||+++++|+||+|+++|..+. ++++|+|||||
T Consensus         9 ~~v~v~~hp~i~~~lt~lRd~~t~~~~Fr~~~~rl~~lL~yEa~~~-lp~~~~~V~TP~g~~~g~~~~-~~~i~~V~IlR   86 (217)
T 3dmp_A            9 PNLFILDHPLIQHKLTHMRDKDTSTRTFRELLREITLLMGYEITRN-LPITTKRVETPLVEIDAPVIA-GKKLAIVPVLR   86 (217)
T ss_dssp             TTEEEECCHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHTTT-CCEEEEEEECSSCEEEEEEEC-GGGEEEEEEET
T ss_pred             CCeEecCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHhc-CCceeEEEECCCeEEEEEEec-CCcEEEEEecc
Confidence            3799999999999999999999999999999999999999999999 999999999999999999886 36799999999


Q ss_pred             cchhHHHHHHhhcCCCceeeEEEEeeecc
Q 025961          197 AGLVLVEHASSILPAIKTYHLGKVVLMHA  225 (245)
Q Consensus       197 AGL~MleG~l~v~P~A~VGhIGIqRd~~~  225 (245)
                      ||++|++++++++|+|++|||++|||.+.
T Consensus        87 aG~~m~~~l~~~ip~a~vg~i~~~Rd~~t  115 (217)
T 3dmp_A           87 AGVGMSDGLLELIPSARVGHIGVYRADDH  115 (217)
T ss_dssp             TTHHHHHHHHHHCTTSEECEEECSCCCSS
T ss_pred             cchHHHHHHHHhCcCCceeEEEEEECCCC
Confidence            99999999999999999999999999875
>1xtt_A Probable uracil phosphoribosyltransferase; tetramer, type 1 phosphoribosyltransferase, UMP complex; HET: U5P; 1.80A {Sulfolobus solfataricus} SCOP: c.61.1.1 PDB: 1vst_A* 1xtu_A* 1xtv_A* 3g6w_A* Back     alignment and structure
>1v9s_A Uracil phosphoribosyltransferase; pyrimidine salvage, oligomerization, structural genomics, RI structural genomics/proteomics initiative; 2.10A {Thermus thermophilus} SCOP: c.61.1.1 Back     alignment and structure
>2ehj_A Uracil phosphoribosyltransferase; structural genomics; 2.80A {Escherichia coli} Back     alignment and structure
>2e55_A Uracil phosphoribosyltransferase; structural genomics; 2.15A {Aquifex aeolicus} Back     alignment and structure
>1o5o_A Uracil phosphoribosyltransferase; TM0721, structural genomic PSI, protein structure initiative, joint center for structu genomics; HET: U5P; 2.30A {Thermotoga maritima} SCOP: c.61.1.1 Back     alignment and structure
>1bd3_D Uprtase, uracil phosphoribosyltransferase; glycosyltransferase; 1.93A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1bd4_D 1jlr_A* 1jls_B* 1upf_D 1upu_D* Back     alignment and structure
>1i5e_A Uracil phosphoribosyltransferase; salvage pathway; HET: U5P; 3.00A {Bacillus caldolyticus} SCOP: c.61.1.1 Back     alignment and structure
>3hvu_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, 2-(N-morphol ethanesulfonic acid (MES), IDP01892; HET: MES; 1.95A {Bacillus anthracis str} PDB: 3h83_A* 3kb8_A* Back     alignment and structure
>3ozf_A Hypoxanthine-guanine-xanthine phosphoribosyltrans; transferase-transferase inhibitor complex; HET: HPA; 1.94A {Plasmodium falciparum fcr-3} PDB: 3ozg_A* 1cjb_A* Back     alignment and structure
>3o7m_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, salvage of nucleosides and nucleotides; HET: GOL; 1.98A {Bacillus anthracis} SCOP: c.61.1.0 Back     alignment and structure
>3ohp_A Hypoxanthine phosphoribosyltransferase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Vibrio cholerae} SCOP: c.61.1.1 PDB: 1g9s_A* 1g9t_A* 1grv_A 1j7j_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 245
d1v9sa1208 c.61.1.1 (A:1-208) Uracil PRTase, Upp {Thermus the 1e-25
d1i5ea_208 c.61.1.1 (A:) Uracil PRTase, Upp {Bacillus caldoly 3e-25
d1o5oa_210 c.61.1.1 (A:) Uracil PRTase, Upp {Thermotoga marit 1e-24
d1xtta1215 c.61.1.1 (A:2-216) Uracil PRTase, Upp {Sulfolobus 2e-23
d1bd3a_224 c.61.1.1 (A:) Uracil PRTase, Upp {Toxoplasma gondi 4e-23
>d1v9sa1 c.61.1.1 (A:1-208) Uracil PRTase, Upp {Thermus thermophilus [TaxId: 274]} Length = 208 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Uracil PRTase, Upp
species: Thermus thermophilus [TaxId: 274]

 Score = 97.7 bits (243), Expect = 1e-25
 Identities = 33/102 (32%), Positives = 59/102 (57%), Gaps = 2/102 (1%)

Query: 117 MLVFVPPHPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMG 176
           M + +  HPL++H ++ LR+++T    FR    E+  L+ YEA RD L      +++P+ 
Sbjct: 1   MRITLVDHPLVQHKLAHLRDKRTGPKDFRELAEEVAMLMAYEAMRD-LELEETTVETPIA 59

Query: 177 VASVEFIDPREPVAVIPILRAGLVLVEHASSILPAIKTYHLG 218
            A V+ +  ++   ++ ILRAGLV+VE    ++P  +  H+G
Sbjct: 60  PARVKVLSGKKLA-LVAILRAGLVMVEGILKLVPHARVGHIG 100
>d1i5ea_ c.61.1.1 (A:) Uracil PRTase, Upp {Bacillus caldolyticus [TaxId: 1394]} Length = 208 Back     information, alignment and structure
>d1o5oa_ c.61.1.1 (A:) Uracil PRTase, Upp {Thermotoga maritima [TaxId: 2336]} Length = 210 Back     information, alignment and structure
>d1xtta1 c.61.1.1 (A:2-216) Uracil PRTase, Upp {Sulfolobus solfataricus [TaxId: 2287]} Length = 215 Back     information, alignment and structure
>d1bd3a_ c.61.1.1 (A:) Uracil PRTase, Upp {Toxoplasma gondii [TaxId: 5811]} Length = 224 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query245
d1i5ea_208 Uracil PRTase, Upp {Bacillus caldolyticus [TaxId: 99.98
d1v9sa1208 Uracil PRTase, Upp {Thermus thermophilus [TaxId: 2 99.98
d1o5oa_210 Uracil PRTase, Upp {Thermotoga maritima [TaxId: 23 99.98
d1xtta1215 Uracil PRTase, Upp {Sulfolobus solfataricus [TaxId 99.97
d1bd3a_224 Uracil PRTase, Upp {Toxoplasma gondii [TaxId: 5811 99.97
>d1i5ea_ c.61.1.1 (A:) Uracil PRTase, Upp {Bacillus caldolyticus [TaxId: 1394]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Uracil PRTase, Upp
species: Bacillus caldolyticus [TaxId: 1394]

Probab=99.98  E-value=7.7e-33  Score=238.43  Aligned_cols=108  Identities=34%  Similarity=0.541  Sum_probs=101.7

Q ss_pred             EEEecCchhHHHHHHhhhcCCCCchHHHHHHHHHHHHHHHHHhcCCCCceeeeEecCCeeeEEEEecCCCCeEEEeeecc
Q 025961          118 LVFVPPHPLIKHWVSILRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILRA  197 (245)
Q Consensus       118 ~I~VldHPLVkh~LTiLRDk~T~~~dFR~~vdrIgrLLayEAl~~~Lp~eeveVeTPlG~t~G~~l~~~k~I~iVPILRA  197 (245)
                      +|++++||+++|+||+|||++|++.+||++++||+++|+|||+++ +|+++++|+||+|.+.+..+.. +++|+||||||
T Consensus         2 ~v~V~~hPlv~~~Lt~LRd~~T~~~~Fr~~~~rl~~lL~yea~~~-l~~~~~~VeTPlg~~~~~~~~~-~~i~~V~ILRA   79 (208)
T d1i5ea_           2 KVYVFDHPLIQHKLTYIRDKNTGTKEFRELVDEVATLMAFEITRD-LPLEEVEIETPVSKARAKVIAG-KKLGVIPILRA   79 (208)
T ss_dssp             CEEECCCHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHGGG-CCEEEEEEECSSCEEEEEEECC-CCEEEEEBTTG
T ss_pred             CEEEcCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHhh-ccceeEEEecCCcceEeeeecC-CceeEeecccc
Confidence            489999999999999999999999999999999999999999999 8999999999999877776653 67999999999


Q ss_pred             chhHHHHHHhhcCCCceeeEEEEeeeccce
Q 025961          198 GLVLVEHASSILPAIKTYHLGKVVLMHACI  227 (245)
Q Consensus       198 GL~MleG~l~v~P~A~VGhIGIqRd~~~~~  227 (245)
                      |++|++|+++++|+|++||||+|||++...
T Consensus        80 Gl~m~~g~~~~~p~a~vg~Ig~~Rd~~t~~  109 (208)
T d1i5ea_          80 GIGMVDGILKLIPAAKVGHIGLYRDPQTLK  109 (208)
T ss_dssp             GGGGHHHHHHHCTTSEECEEEEECCTTCSS
T ss_pred             hhhHHHHHHHhCCCceeeeEEEeeccCCCC
Confidence            999999999999999999999999998754
>d1v9sa1 c.61.1.1 (A:1-208) Uracil PRTase, Upp {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1o5oa_ c.61.1.1 (A:) Uracil PRTase, Upp {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1xtta1 c.61.1.1 (A:2-216) Uracil PRTase, Upp {Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1bd3a_ c.61.1.1 (A:) Uracil PRTase, Upp {Toxoplasma gondii [TaxId: 5811]} Back     information, alignment and structure