Citrus Sinensis ID: 027216

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220------
Protein Sequence
MGAEAKATHLMMSKVFSTCNLPISISKSKSFKLVPHHNSKIYAASFKKNIDSSQPQIVKKSSKIPRPLITVSPSDGRWHGNWNSEYVVSLKQLRLADLIEDDDHLHQHKNKDAQVSINLSIQKHASFGFSVDGRIITSFSRKCSYCSSPYCKKIDTTFNVWVLLSSRENRNVQLPDIGGDPSVIYVKPGYQADLDSLVQDTIRLTTAVKVLNIKSLLSAVTFILFF
Secondary Structure (PSIPRED)
cccccccccEEEEEEccEEccccccccccEEEEcccccccEEEcccccccccccccEEcccccccccEEEEccccccccccccccEEEEEccccccccccccccccccccccccEEEEEEEEEcccccEEEccEEEEEEcccccccccccccccccEEEEEEEEcccccccccccccccccEEEEEcccccccHHHHHHHHEEEcccEEEEEHHHHHHHEEEEEcc
Secondary Structure Prediction (SSPRO)
ccccEcccccEEEEEEEccccccccccccccEEcccccccEEEcccccccccccccEEccccccccEEEEEEcccccccccccccEEEEHHHccHHHHHcccccccccccccccEEEEEEEEEEEccccEEEEEEEEccHHHccccccccccEccccEEEEEEEcccccccccccccccccEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Coil and Loop (DISEMBL)
MGAEAKATHLMMSKVFstcnlpisisksksfklvphhnskIYAASFkknidssqpqivkksskiprplitvspsdgrwhgnwnSEYVVSLKQLRLADLiedddhlhqhknkdAQVSINLSIQKhasfgfsvdgrIITSFsrkcsycsspyckkidtTFNVWVLLSSrenrnvqlpdiggdpsviyvkpgyqadLDSLVQDTIRLTTAVKVLNIKSLLSAVTFILFF
Flexible Loop (DISEMBL)
mgaeakatHLMMSKVFSTCNLPISISKSKSFKLVPHHNSKIYAAsfkknidssqpqivkksskiprplitvspsdgrwhgnWNSEYVVSLKQLRLADLIEDDDHLHQHKNKDAQVSINLSIQKHASFGFSVDGRIITSFSRKCSYCSSPYCKKIDTTFNVWVLLSSRENrnvqlpdiggDPSVIYVKPGYQADLDSLVQDTIRLTTAVKVLNIKSLLSAVTFILFF
Low Complexity Region (SEG)
MGAEAKATHLMMSKVFSTCNLPISISKSKSFKLVPHHNSKIYAASFKKNIDSSQPQIVKKSSKIPRPLITVSPSDGRWHGNWNSEYVVSLKQLRLADLIEDDDHLHQHKNKDAQVSINLSIQKHASFGFSVDGRIITSFSRKCSYCSSPYCKKIDTTFNVWVLLSSRENRNVQLPDIGGDPSVIYVKPGYQADLDSLVQDTIRLTTAVKVLNIKSLLSAVTFILFF
Disordered region (IsUnstruct)
***********MSKVFSTCNLPISISKSKSFKLVPHHNSKIYAA************************ITVSPSDGRWHGNWNSEYVVSLKQLRLADLIEDDDHLHQHKNKDAQVSINLSIQKHASFGFSVDGRIITSFSRKCSYCSSPYCKKIDTTFNVWVLLSSRENRNVQLPDIGGDPSVIYVKPGYQADLDSLVQDTIRLTTAVKVLNIKSLLSAVTFILF*
Disordered Region (DISOPRED)
************SKVFSTCNLPISISKSKSFKLVPHHNSK*********************************SDGRWHGNWNSEYVVSLKQLRLADLIED************QVSINLSIQKHASFGFSVDGRIITSFSRKCSYCSSPYCKKIDTTFNVWVLLS************GGDPSVIYVKPGYQADLDSLVQDTIRLTTAVKVLNIKSLLSAVTFILFF
Disordered Region (DISEMBL)
********HLMMSKVFSTCNLPISISKSKSFKLVPHHNSKIYAASFKKNIDSSQPQIVKKSSKIPRPLITVSPSDGRWHGNWNSEYVVSLKQLRLADLIEDDDHLHQHKNKDAQVSINLSIQKHASFGFSVDGRIITSFSRKCSYCSSPYCKKIDTTFNVWVLLSSRENRNVQLPDIGGDPSVIYVKPGYQADLDSLVQDTIRLTTAVKVLNIKSLLSAVTFILFF
Disordered Region (DISPRO)
********HLMMSKVFSTCNLPISISKSKSFKLVPHHNSKIYAASFKKNIDSSQPQIVKKSSKIPRPLITVSPSDGRWHGNWNSEYVVSLKQLRLADLIEDDDHLH*HKNKDAQVSINLSIQKHASFGFSVDGRIITSFSRKCSYCSSPYCKKIDTTFNVWVLLSSR*NRNVQLPDIGGDPSVIYVKPGYQADLDSLVQDTIRLTTAVKVLNIKSLLSAVTFILFF
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGAEAKATHLMMSKVFSTCNLPISISKSKSFKLVPHHNSKIYAASFKKNIDSSQPQIVKKSSKIPRPLITVSPSDGRWHGNWNSEYVVSLKQLRLADLIEDDDHLHQHKNKDAQVSINLSIQKHASFGFSVDGRIITSFSRKCSYCSSPYCKKIDTTFNVWVLLSSRENRNVQLPDIGGDPSVIYVKPGYQADLDSLVQDTIRLTTAVKVLNIKSLLSAVTFILFF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	226
358249006	247	uncharacterized protein LOC100788798 [Gl	0.796	0.728	0.572	8e-56
359473495	235	PREDICTED: uncharacterized protein LOC10	0.641	0.617	0.655	9e-49
449526658	230	PREDICTED: uncharacterized protein LOC10	0.699	0.686	0.584	3e-48
449527769	231	PREDICTED: uncharacterized LOC101221885	0.694	0.679	0.567	2e-47
449461695	186	PREDICTED: uncharacterized protein LOC10	0.641	0.779	0.607	4e-47
357473857	251	hypothetical protein MTR_4g074590 [Medic	0.884	0.796	0.478	4e-46
297830644	226	hypothetical protein ARALYDRAFT_479497 [	0.628	0.628	0.62	8e-46
186510250	226	uncharacterized protein [Arabidopsis tha	0.628	0.628	0.613	3e-45
18402369	229	uncharacterized protein [Arabidopsis tha	0.628	0.620	0.613	4e-45
297738227	222	unnamed protein product [Vitis vinifera]	0.584	0.594	0.577	1e-36

>gi|358249006|ref|NP_001239977.1| uncharacterized protein LOC100788798 [Glycine max] gi|255647019|gb|ACU23978.1| unknown [Glycine max]

 Score =  222 bits (566), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 107/187 (57%), Positives = 137/187 (73%), Gaps = 7/187 (3%)

Query: 26  SKSKSFKLVPH---HNSKIYAASFKKNIDSSQPQIVKKSSKIPRPLITVSPSDGRWHGNW 82
           +K K+ +L+     +N+     + K+  D   P I K +S+ PR LIT+SP DG++HG+W
Sbjct: 25  TKLKTLRLLSRFHSYNNNATVTASKRKDDLQSPLIGKNTSRAPRRLITISPGDGKYHGDW 84

Query: 83  NSEYVVSLKQLRLADLIEDDDHLHQHKNKDAQVSINLSIQKHASFGFSVDGRIITSFSRK 142
             +Y VSL  L L DLIEDD++      KDAQV INLSIQKHASFG SVDGR+ TSF+RK
Sbjct: 85  TCDYRVSLHDLELQDLIEDDNN----SRKDAQVFINLSIQKHASFGLSVDGRVTTSFTRK 140

Query: 143 CSYCSSPYCKKIDTTFNVWVLLSSRENRNVQLPDIGGDPSVIYVKPGYQADLDSLVQDTI 202
           CS CSSPYC++ID  FNVWVL++ R++R + LPDIGGDP+VIYV+PGY+ DLDSLVQD I
Sbjct: 141 CSTCSSPYCRQIDAKFNVWVLIARRDDRKIPLPDIGGDPNVIYVRPGYEVDLDSLVQDAI 200

Query: 203 RLTTAVK 209
           RL + VK
Sbjct: 201 RLNSVVK 207

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359473495|ref|XP_002269529.2| PREDICTED: uncharacterized protein LOC100253004 [Vitis vinifera]

 Score =  199 bits (505), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 101/154 (65%), Positives = 123/154 (79%), Gaps = 9/154 (5%)

Query: 57  IVKKSSKIPRPLITVSPSDGRWHGNWNSEYVVSLKQLRLADLIEDDDHLHQHKNKDAQVS 116
           I KKSS+ P+ LIT+S SDGRWHG WNS+YV S ++L      + +D + + + KDA+VS
Sbjct: 50  IAKKSSRSPKRLITISTSDGRWHGKWNSDYVFSFREL------QLEDLVEEDEEKDAEVS 103

Query: 117 INLSIQKHASFGFSVDGRIITSFSRKCSYCSSPYCKKIDTTFNVWVLLSSRENRNVQLPD 176
           I+L I KHASFGFSVDGRIITSF+RKCS CSSPYCK++DT F VWVL +SRE  N  L +
Sbjct: 104 ISLCIHKHASFGFSVDGRIITSFTRKCSNCSSPYCKEVDTNFTVWVLPTSRE--NCGLAE 161

Query: 177 IGG-DPSVIYVKPGYQADLDSLVQDTIRLTTAVK 209
           IGG DPSVIYVKPG +A+LDSL+QDTIRLTT+VK
Sbjct: 162 IGGDDPSVIYVKPGCEANLDSLIQDTIRLTTSVK 195

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449526658|ref|XP_004170330.1| PREDICTED: uncharacterized protein LOC101223452 [Cucumis sativus]

 Score =  197 bits (500), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 97/166 (58%), Positives = 121/166 (72%), Gaps = 8/166 (4%)

Query: 45  SFKKNIDSSQPQIVKKSSKIPRPLITVSPSDGRWHGNWNSEYVVSLKQLRLADLIEDDDH 104
           +FK    S +  I  +S+K  R LIT+S +  RW G W  +Y++SL+ L L DL+ED+  
Sbjct: 32  TFKIKASSKRNDISLRSNKTTRRLITISTAGSRWQGKWTCDYLLSLRDLNLEDLVEDE-- 89

Query: 105 LHQHKNKDAQVSINLSIQKHASFGFSVDGRIITSFSRKCSYCSSPYCKKIDTTFNVWVLL 164
                NK+A V INL I+KHASFGF+VDGRI TSF+RKC  CSSPYC++I+  FNV VL 
Sbjct: 90  -----NKNAHVFINLCIEKHASFGFTVDGRINTSFTRKCCACSSPYCREINANFNVLVLS 144

Query: 165 SSRENRNVQLPDIGG-DPSVIYVKPGYQADLDSLVQDTIRLTTAVK 209
           S+R NR + LPDIGG DPSVIYVKPG +ADLDSLV+DTIRLTT+ K
Sbjct: 145 SNRANREIHLPDIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTK 190

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449527769|ref|XP_004170882.1| PREDICTED: uncharacterized LOC101221885 [Cucumis sativus]

 Score =  194 bits (493), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 97/171 (56%), Positives = 124/171 (72%), Gaps = 14/171 (8%)

Query: 40  KIYAASFKKNIDSSQPQIVKKSSKIPRPLITVSPSDGRWHGNWNSEYVVSLKQLRLADLI 99
           KI A+S + +I       +++S+K  R LIT+S +  RW G W  +Y++SL+ L L DL+
Sbjct: 34  KIKASSKRNDIS------LRRSNKTTRRLITISTAGSRWQGKWTVDYMLSLQDLNLEDLV 87

Query: 100 EDDDHLHQHKNKDAQVSINLSIQKHASFGFSVDGRIITSFSRKCSYCSSPYCKKIDTTFN 159
           ED+       N +A V INL I+KHASFGF+VDGRI TSF+RKC  CSSPYC++I+  FN
Sbjct: 88  EDE-------NNNAHVFINLCIEKHASFGFTVDGRINTSFTRKCCACSSPYCREINANFN 140

Query: 160 VWVLLSSRENRNVQLPDIGG-DPSVIYVKPGYQADLDSLVQDTIRLTTAVK 209
           V VL S+R NR + LPDIGG DPSVIYVKPG +ADLDSLV+DTIRLTT+ K
Sbjct: 141 VLVLSSNRANREIHLPDIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTK 191

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449461695|ref|XP_004148577.1| PREDICTED: uncharacterized protein LOC101202864 [Cucumis sativus]

 Score =  193 bits (491), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 93/153 (60%), Positives = 116/153 (75%), Gaps = 8/153 (5%)

Query: 58  VKKSSKIPRPLITVSPSDGRWHGNWNSEYVVSLKQLRLADLIEDDDHLHQHKNKDAQVSI 117
           +K+S+K  R LIT+S +  RW G W  +Y++SL+ L L DL+ED+       N +A V I
Sbjct: 1   MKRSNKTTRRLITISTAGSRWQGKWTCDYLLSLRDLNLEDLVEDE-------NNNAHVFI 53

Query: 118 NLSIQKHASFGFSVDGRIITSFSRKCSYCSSPYCKKIDTTFNVWVLLSSRENRNVQLPDI 177
           NL I+KHASFGF+VDGRI TSF+RKC  CSSPYC++I+  FNV VL S+R NR + LPDI
Sbjct: 54  NLCIEKHASFGFTVDGRINTSFTRKCCACSSPYCREINANFNVLVLSSNRANREIHLPDI 113

Query: 178 GG-DPSVIYVKPGYQADLDSLVQDTIRLTTAVK 209
           GG DPSVIYVKPG +ADLDSLV+DTIRLTT+ K
Sbjct: 114 GGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTK 146

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357473857|ref|XP_003607213.1| hypothetical protein MTR_4g074590 [Medicago truncatula] gi|217073908|gb|ACJ85314.1| unknown [Medicago truncatula] gi|355508268|gb|AES89410.1| hypothetical protein MTR_4g074590 [Medicago truncatula] gi|388504480|gb|AFK40306.1| unknown [Medicago truncatula]

 Score =  190 bits (482), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 102/213 (47%), Positives = 138/213 (64%), Gaps = 13/213 (6%)

Query: 5   AKATHLMMSKVFSTCNLPI-SISKSKSFKLVPH-------HNSKIYAASFKKNIDSSQPQ 56
           AK+ +L+  + FS+   P  + +K+K F  +           S    AS K+  +   P 
Sbjct: 2   AKSGNLVSQRSFSSIFNPCHTATKAKPFSFLSQFHTYNNTSGSVTITASTKRKDNLDSPL 61

Query: 57  IVKKSSKIPRPLITVSPSDGRWHGNWNSEYVVSLKQLRLADLIEDDDHLHQHKNKDAQVS 116
           I K +++  R LIT+SP+DG+++G W S+Y+VSL+ L L DLIE +D       K+AQV 
Sbjct: 62  IGKNTNRATRRLITISPADGKYNGEWTSDYLVSLRDLHLQDLIEVEDD----PRKNAQVV 117

Query: 117 INLSIQKHASFGFSVDGRIITSFSRKCSYCSSPYCKKIDTTFNVWVLLSS-RENRNVQLP 175
           INL +QKHASFG SVD RI TSF  KCS CSSPYC++ID  FNVWVL ++ R+ R   LP
Sbjct: 118 INLCVQKHASFGLSVDARITTSFPSKCSNCSSPYCRQIDAKFNVWVLRATNRDKRKTPLP 177

Query: 176 DIGGDPSVIYVKPGYQADLDSLVQDTIRLTTAV 208
           +IG DP VIY +PGY+ DLDS+V+D IRL +AV
Sbjct: 178 EIGDDPYVIYTRPGYEVDLDSIVKDAIRLNSAV 210

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297830644|ref|XP_002883204.1| hypothetical protein ARALYDRAFT_479497 [Arabidopsis lyrata subsp. lyrata] gi|297329044|gb|EFH59463.1| hypothetical protein ARALYDRAFT_479497 [Arabidopsis lyrata subsp. lyrata]

 Score =  189 bits (480), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 93/150 (62%), Positives = 118/150 (78%), Gaps = 8/150 (5%)

Query: 61  SSKIPRPLITVSPSDGRWHGNWNSEYVVSLKQLRLADLIEDDDHLHQHKNKDAQVSINLS 120
           SSK  + LIT+SPS+G+W+GNWN++Y VSL+ L L DL+ED          +++VS++LS
Sbjct: 46  SSKTVKRLITLSPSEGKWNGNWNTQYDVSLRDLHLQDLVEDGP-------PNSRVSVDLS 98

Query: 121 IQKHASFGFSVDGRIITSFSRKCSYCSSPYCKKIDTTFNVWVLLSSRENRNVQLPDIGG- 179
           +Q+HAS G SVDGRI+TS +RKCS CSS Y + IDT+F VW+L SSRENR   LP+IGG 
Sbjct: 99  VQRHASMGLSVDGRIMTSIARKCSICSSLYPRLIDTSFTVWILPSSRENRASTLPEIGGD 158

Query: 180 DPSVIYVKPGYQADLDSLVQDTIRLTTAVK 209
           DPSVIYV+PGY+A+LDSLVQDTIRLTT  K
Sbjct: 159 DPSVIYVRPGYEANLDSLVQDTIRLTTYAK 188

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|186510250|ref|NP_001118666.1| uncharacterized protein [Arabidopsis thaliana] gi|332642770|gb|AEE76291.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  187 bits (475), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 92/150 (61%), Positives = 118/150 (78%), Gaps = 8/150 (5%)

Query: 61  SSKIPRPLITVSPSDGRWHGNWNSEYVVSLKQLRLADLIEDDDHLHQHKNKDAQVSINLS 120
           SSK  + LIT+SPS+G+W+GNW ++Y VSL+ L+L DL+ED          +++VS++LS
Sbjct: 46  SSKTVKRLITLSPSEGKWNGNWKTQYDVSLRDLQLQDLVEDGP-------PNSRVSVDLS 98

Query: 121 IQKHASFGFSVDGRIITSFSRKCSYCSSPYCKKIDTTFNVWVLLSSRENRNVQLPDIGG- 179
           +Q+HAS G SVDGRI+TS +RKCS CSS Y + IDT+F VW+L SSRENR   LP+IGG 
Sbjct: 99  VQRHASMGLSVDGRIMTSIARKCSICSSLYPRLIDTSFTVWILPSSRENRASTLPEIGGD 158

Query: 180 DPSVIYVKPGYQADLDSLVQDTIRLTTAVK 209
           DPSVIYV+PGY+A+LDSLVQDTIRLTT  K
Sbjct: 159 DPSVIYVRPGYEANLDSLVQDTIRLTTYAK 188

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18402369|ref|NP_566648.1| uncharacterized protein [Arabidopsis thaliana] gi|13430476|gb|AAK25860.1|AF360150_1 unknown protein [Arabidopsis thaliana] gi|15810535|gb|AAL07155.1| unknown protein [Arabidopsis thaliana] gi|21593667|gb|AAM65634.1| unknown [Arabidopsis thaliana] gi|332642769|gb|AEE76290.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  187 bits (474), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 92/150 (61%), Positives = 118/150 (78%), Gaps = 8/150 (5%)

Query: 61  SSKIPRPLITVSPSDGRWHGNWNSEYVVSLKQLRLADLIEDDDHLHQHKNKDAQVSINLS 120
           SSK  + LIT+SPS+G+W+GNW ++Y VSL+ L+L DL+ED          +++VS++LS
Sbjct: 49  SSKTVKRLITLSPSEGKWNGNWKTQYDVSLRDLQLQDLVEDGP-------PNSRVSVDLS 101

Query: 121 IQKHASFGFSVDGRIITSFSRKCSYCSSPYCKKIDTTFNVWVLLSSRENRNVQLPDIGG- 179
           +Q+HAS G SVDGRI+TS +RKCS CSS Y + IDT+F VW+L SSRENR   LP+IGG 
Sbjct: 102 VQRHASMGLSVDGRIMTSIARKCSICSSLYPRLIDTSFTVWILPSSRENRASTLPEIGGD 161

Query: 180 DPSVIYVKPGYQADLDSLVQDTIRLTTAVK 209
           DPSVIYV+PGY+A+LDSLVQDTIRLTT  K
Sbjct: 162 DPSVIYVRPGYEANLDSLVQDTIRLTTYAK 191

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297738227|emb|CBI27428.3| unnamed protein product [Vitis vinifera]

 Score =  158 bits (400), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 89/154 (57%), Positives = 110/154 (71%), Gaps = 22/154 (14%)

Query: 57  IVKKSSKIPRPLITVSPSDGRWHGNWNSEYVVSLKQLRLADLIEDDDHLHQHKNKDAQVS 116
           I KKSS+ P+ LIT+S SDGRWHG WNS+YV S ++L      + +D + + + KDA+VS
Sbjct: 50  IAKKSSRSPKRLITISTSDGRWHGKWNSDYVFSFREL------QLEDLVEEDEEKDAEVS 103

Query: 117 INLSIQKHASFGFSVDGRIITSFSRKCSYCSSPYCKKIDTTFNVWVLLSSRENRNVQLPD 176
           I+L I KHASFGFSVDGRIITSF+RKCS CSSPYCK++DT F VWVL +SRE  N  L +
Sbjct: 104 ISLCIHKHASFGFSVDGRIITSFTRKCSNCSSPYCKEVDTNFTVWVLPTSRE--NCGLAE 161

Query: 177 IGG-DPSVIYVKPGYQADLDSLVQDTIRLTTAVK 209
           IGG DPS+        +DL      TIRLTT+VK
Sbjct: 162 IGGDDPSL--------SDL-----YTIRLTTSVK 182

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	226
TAIR|locus:2092256	229	AT3G19800 "AT3G19800" [Arabido	0.628	0.620	0.613	8.1e-44

TAIR|locus:2092256 AT3G19800 "AT3G19800" [Arabidopsis thaliana (taxid:3702)]

 Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
 Identities = 92/150 (61%), Positives = 118/150 (78%)

Query:    61 SSKIPRPLITVSPSDGRWHGNWNSEYVVSLKQLRLADLIEDDDHLHQHKNKDAQVSINLS 120
             SSK  + LIT+SPS+G+W+GNW ++Y VSL+ L+L DL+ED          +++VS++LS
Sbjct:    49 SSKTVKRLITLSPSEGKWNGNWKTQYDVSLRDLQLQDLVEDGP-------PNSRVSVDLS 101

Query:   121 IQKHASFGFSVDGRIITSFSRKCSYCSSPYCKKIDTTFNVWVLLSSRENRNVQLPDIGGD 180
             +Q+HAS G SVDGRI+TS +RKCS CSS Y + IDT+F VW+L SSRENR   LP+IGGD
Sbjct:   102 VQRHASMGLSVDGRIMTSIARKCSICSSLYPRLIDTSFTVWILPSSRENRASTLPEIGGD 161

Query:   181 -PSVIYVKPGYQADLDSLVQDTIRLTTAVK 209
              PSVIYV+PGY+A+LDSLVQDTIRLTT  K
Sbjct:   162 DPSVIYVRPGYEANLDSLVQDTIRLTTYAK 191


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.132   0.387    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      226       226   0.00078  113 3  11 22  0.39    33
                                                     32  0.41    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  600 (64 KB)
  Total size of DFA:  183 KB (2106 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  19.93u 0.09s 20.02t   Elapsed:  00:00:01
  Total cpu time:  19.93u 0.09s 20.02t   Elapsed:  00:00:01
  Start:  Fri May 10 05:03:16 2013   End:  Fri May 10 05:03:17 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00021185001 SubName- Full=Chromosome chr1 scaffold_22, whole genome shotgun sequence; (243 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	226
pfam02620	118	pfam02620, DUF177, Uncharacterized ACR, COG1399	0.002

>gnl|CDD|217148 pfam02620, DUF177, Uncharacterized ACR, COG1399

 Score = 36.5 bits (85), Expect = 0.002
 Identities = 19/81 (23%), Positives = 34/81 (41%), Gaps = 4/81 (4%)

Query: 131 VDGRIITSFSRKCSYCSSPYCKKIDTTFNVWVLLSSRENRNVQLPDIGGDPSVIYVKPGY 190
           +DG +  + +  C  C  P    +D  F    +    E  + +L D   D  ++    G 
Sbjct: 1   LDGEVEATVTLPCDRCLEPVEYPLDVDFEELFVPEEEEAEDEELED--DDEEILV--EGD 56

Query: 191 QADLDSLVQDTIRLTTAVKVL 211
           + DL  LV++ + L   +K L
Sbjct: 57  EIDLGELVEEELLLALPMKPL 77

Length = 118

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	226
PRK11193	172	hypothetical protein; Provisional	99.78
PF02620	119	DUF177: Uncharacterized ACR, COG1399; InterPro: IP	99.78
COG1399	176	Predicted metal-binding, possibly nucleic acid-bin	99.64

>PRK11193 hypothetical protein; Provisional

Probab=99.78  E-value=7e-19  Score=146.97  Aligned_cols=101  Identities=17%  Similarity=0.279  Sum_probs=81.3

Q ss_pred             CcceEEEEEEEEecCCeEEEEEEEEEEEeeecccccccccccccccEEEEEEecccccccCCCCCCCCCCeeEEecCCce
Q 027216          112 DAQVSINLSIQKHASFGFSVDGRIITSFSRKCSYCSSPYCKKIDTTFNVWVLLSSRENRNVQLPDIGGDPSVIYVKPGYQ  191 (226)
Q Consensus       112 ~aPV~V~l~V~k~~g~~l~VdG~I~tsv~~~CsRCLkpF~~~Id~~F~e~~v~s~~ed~~~~e~ELgdDd~iiy~~eGDe  191 (226)
                      .+||+|++.+.+.+++++.|+|++++.+.+.|+|||+||.++++.+|...++.+..+.     .++.++...++.++|++
T Consensus        42 ~~~v~v~~~~~~~~~~~~~v~g~v~~~v~l~C~RCL~~~~~~l~~~~~~~~~~~e~~~-----~~~~~~~e~~~~~~~~~  116 (172)
T PRK11193         42 DSDVEVSLSFGIDNQRLVVLKGKAVVEVTLECQRCNEPFTHQVEVEFCFSPVRNDEQA-----EELPEAYEPIEVNEFGE  116 (172)
T ss_pred             CCceEEEEEEEEcCCCeEEEEEEEEEEEEEECCCCCccCceEEEEEEEEEEecChhhh-----hhCcccccceeeCCcCc
Confidence            4789999999999446899999999999999999999999999999998886432111     11122211222368899


Q ss_pred             eeCcHHHHHHhhhhCCccccCccC-Cc
Q 027216          192 ADLDSLVQDTIRLTTAVKVLNIKS-LL  217 (226)
Q Consensus       192 IDLdelI~EqIiLalPmK~LCsED-CK  217 (226)
                      |||+++|+|+|+|++|++++|+++ |.
T Consensus       117 iDl~~lv~dellLaLP~~plc~~~~C~  143 (172)
T PRK11193        117 VDLLQLVEDELILALPIVPMHDSEHCE  143 (172)
T ss_pred             ccHHHHHHHHHHHcCCCcCcCCcccCC
Confidence            999999999999999999999975 74

>PF02620 DUF177: Uncharacterized ACR, COG1399; InterPro: IPR003772 This entry describes proteins of unknown function

Probab=99.78  E-value=5e-19  Score=136.25  Aligned_cols=86  Identities=22%  Similarity=0.346  Sum_probs=70.4

Q ss_pred             EEEEEEEEEeeecccccccccccccccEEEEEEecccccccCCCCCCCCCCeeEEecCCceeeCcHHHHHHhhhhCCccc
Q 027216          131 VDGRIITSFSRKCSYCSSPYCKKIDTTFNVWVLLSSRENRNVQLPDIGGDPSVIYVKPGYQADLDSLVQDTIRLTTAVKV  210 (226)
Q Consensus       131 VdG~I~tsv~~~CsRCLkpF~~~Id~~F~e~~v~s~~ed~~~~e~ELgdDd~iiy~~eGDeIDLdelI~EqIiLalPmK~  210 (226)
                      |+|+|++++...|+|||+||.++++.+|++.|........   ..++.+++..++.+.+++|||.++|+|+|+|++||++
T Consensus         1 v~g~i~~~v~~~C~RCL~~~~~~i~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~iDl~~~i~e~ilL~iP~~~   77 (119)
T PF02620_consen    1 VDGRIEGTVTLPCDRCLEPFDYPIDEDFEEVFVPEEEEEE---DEELDEEDEEVIPVEDDEIDLAELIEEEILLAIPMKP   77 (119)
T ss_pred             CEEEEEEEEEEEEcccCcccCceEEEEEEEEEEcCCcccc---cccCCCCCceEEecCCCEEeHHHHHHHHHHHcCCCcc
Confidence            6899999999999999999999999999999987633321   1111213344444799999999999999999999999


Q ss_pred             cCccCCccc
Q 027216          211 LNIKSLLSA  219 (226)
Q Consensus       211 LCsEDCKG~  219 (226)
                      +|+++|+|.
T Consensus        78 ~c~~~C~~~   86 (119)
T PF02620_consen   78 LCSEDCKGE   86 (119)
T ss_pred             cCcccCccc
Confidence            999999993

>COG1399 Predicted metal-binding, possibly nucleic acid-binding protein [General function prediction only]

Probab=99.64  E-value=1.1e-15  Score=129.87  Aligned_cols=87  Identities=18%  Similarity=0.175  Sum_probs=71.8

Q ss_pred             eEEEEEEEEEEEeeecccccccccccccccEEEEEEecccccccCCCCCCCCCCeeEEecCCceeeCcHHHHHHhhhhCC
Q 027216          128 GFSVDGRIITSFSRKCSYCSSPYCKKIDTTFNVWVLLSSRENRNVQLPDIGGDPSVIYVKPGYQADLDSLVQDTIRLTTA  207 (226)
Q Consensus       128 ~l~VdG~I~tsv~~~CsRCLkpF~~~Id~~F~e~~v~s~~ed~~~~e~ELgdDd~iiy~~eGDeIDLdelI~EqIiLalP  207 (226)
                      ++.++|++.+.+.+.|+|||++|.++++..+++.|+....  +. ++ +..+|+.+.+ +++++|||.+.|.|+|+|++|
T Consensus        57 ~~~~~~~~~~~~~l~C~Rcl~~~~~~~~~~~~~~f~~~~~--~~-~~-~~~~dd~v~v-~~~~~iDL~~~VeDeilLalP  131 (176)
T COG1399          57 LVVLDGQVSAEVTLECQRCLEPVEYPLDVTVTELFVRPDE--QA-DE-EPLEDDEVEV-IEDGEIDLLESVEDEILLALP  131 (176)
T ss_pred             eEEEEEEEEEEEEEcccccCCcceeeEEEEEEEEeecCcc--cc-cc-ccCCCceeee-ccCCcccHHHHHHHHHHHhCC
Confidence            5999999999999999999999999999999999987632  11 11 1222334443 667799999999999999999


Q ss_pred             ccccCccCCccc
Q 027216          208 VKVLNIKSLLSA  219 (226)
Q Consensus       208 mK~LCsEDCKG~  219 (226)
                      |+++|.++|+|.
T Consensus       132 ~~~l~~~~~~g~  143 (176)
T COG1399         132 LVPLCEPECCGL  143 (176)
T ss_pred             CccccCcccccc
Confidence            999999999994

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00