Citrus Sinensis ID: 027621

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-
Protein Sequence
MAGCLSLLRRLYLTAYNWTVFAGWAQVLYLALKTLNESGHENVYKAVERPLQLAQTAAVLEILHGLLGLVRSPITATLPQISSRLYVTWGILWSFPQTQNHILVSSLVISWSLTEIIRYSFFGMKEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSFDYFYAAILVLGFYVPGSPHMYTYMLGQRKKALSKSKKE
Secondary Structure (PSIPRED)
ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHccccEEEEEEEEEcccccccHHHHHHHHHHHcccccccHHHHHHHHHcccccHHHHHHcccEEEEccccHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHccccHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHEHHHHcHHHHHHHHHHHHHHcHHHHccccEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc
Coil and Loop (DISEMBL)
MAGCLSLLRRLYLTAYNWTVFAGWAQVLYLALKTLNESGHENVYKAVERPLQLAQTAAVLEILHGLLglvrspitatlpqiSSRLYVTWGILwsfpqtqnhILVSSLVISWSLTEIIRYSFFGMkealgfapsWLLWLRYSTFLllypsgitsevGLIYTAlpyikesetyclrmpnkwnfsfDYFYAAILVLGfyvpgsphmYTYMLGQRKKALSKSKKE
Flexible Loop (DISEMBL)
MAGCLSLLRRLYLTAYNWTVFAGWAQVLYLALKTLNESGHENVYKAVERPLQLAQTAAVLEILHGLLGLVRSPITATLPQISSRLYVTWGILWSFPQTQNHILVSSLVISWSLTEIIRYSFFGMKEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSFDYFYAAILVLGFYVPGSPHMYTYMLGQRKKALSKSKKE
Low Complexity Region (SEG)
MAGCLSLLRRLYLTAYNWTVFAGWAQVLYLALKTLNESGHENVYKAVERPLQLAQTAAVLEILHGLLGLVRSPITATLPQISSRLYVTWGILWSFPQTQNHilvsslviswslTEIIRYSFFGMKEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSFDYFYAAILVLGFYVPGSPHMYTYMLGQRKKALSKSKKE
Disordered region (IsUnstruct)
***CLSLLRRLYLTAYNWTVFAGWAQVLYLALKTLNESGHENVYKAVERPLQLAQTAAVLEILHGLLGLVRSPITATLPQISSRLYVTWGILWSFPQTQNHILVSSLVISWSLTEIIRYSFFGMKEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSFDYFYAAILVLGFYVPGSPHMYTYMLG************
Disordered Region (DISOPRED)
*****SL**RLYLTAYNWTVFAGWAQVLYLALKTLNESGHENVYKAVERPLQLAQTAAVLEILHGLLGLVRSPITATLPQISSRLYVTWGILWSFPQTQNHILVSSLVISWSLTEIIRYSFFGMKEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSFDYFYAAILVLGFYVPGSPHMYTYMLGQ***********
Disordered Region (DISEMBL)
MAGCLSLLRRLYLTAYNWTVFAGWAQVLYLALKTLNESGHENVYKAVERPLQLAQTAAVLEILHGLLGLVRSPITATLPQISSRLYVTWGILWSFPQTQNHILVSSLVISWSLTEIIRYSFFGMKEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSFDYFYAAILVLGFYVPGSPHMYTYMLGQ***********
Disordered Region (DISPRO)
**GCLSLLRRLYLTAYNWTVFAGWAQVLYLALKTLNESGHENVYKAVERPLQLAQTAAVLEILHGLLGLVRSPITATLPQISSRLYVTWGILWSFPQTQNHILVSSLVISWSLTEIIRYSFFGMKEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSFDYFYAAILVLGFYVPGSPHMYTYMLGQRKKALS*****
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAGCLSLLRRLYLTAYNWTVFAGWAQVLYLALKTLNESGHENVYKAVERPLQLAQTAAVLEILHGLLGLVRSPITATLPQISSRLYVTWGILWSFPQTQNHILVSSLVISWSLTEIIRYSFFGMKEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSFDYFYAAILVLGFYVPGSPHMYTYMLGQRKKALSKSKKE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	221	2.2.26 [Sep-21-2011]
Q8VZB2	221	Very-long-chain (3R)-3-hy	yes	no	1.0	1.0	0.787	1e-100
Q7XSZ4	221	Very-long-chain (3R)-3-hy	yes	no	0.954	0.954	0.796	1e-97
Q5ZEJ0	221	Very-long-chain (3R)-3-hy	yes	no	0.954	0.954	0.777	3e-95
Q9QY80	281	Very-long-chain (3R)-3-hy	no	no	0.950	0.747	0.396	1e-39
Q9D3B1	254	Very-long-chain (3R)-3-hy	no	no	0.945	0.822	0.393	3e-39
Q4W1W1	249	Very-long-chain (3R)-3-hy	yes	no	0.950	0.843	0.386	5e-39
Q2KIP8	254	Very-long-chain (3R)-3-hy	yes	no	0.945	0.822	0.383	5e-39
Q5RBK3	255	Very-long-chain (3R)-3-hy	yes	no	0.945	0.819	0.383	7e-39
Q6Y1H2	254	Very-long-chain (3R)-3-hy	yes	no	0.945	0.822	0.383	7e-39
Q9N1R5	288	Very-long-chain (3R)-3-hy	N/A	no	0.950	0.729	0.382	8e-39

>sp|Q8VZB2|PAS2_ARATH Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase PASTICCINO 2 OS=Arabidopsis thaliana GN=PAS2 PE=1 SV=1

 Score =  365 bits (938), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 174/221 (78%), Positives = 200/221 (90%)

Query: 1   MAGCLSLLRRLYLTAYNWTVFAGWAQVLYLALKTLNESGHENVYKAVERPLQLAQTAAVL 60
           MAG LS++RR+YLT YNW VFAGWAQVLYLA+ TL E+G+ENVY A+E+PLQLAQTAAVL
Sbjct: 1   MAGFLSVVRRVYLTLYNWIVFAGWAQVLYLAITTLKETGYENVYDAIEKPLQLAQTAAVL 60

Query: 61  EILHGLLGLVRSPITATLPQISSRLYVTWGILWSFPQTQNHILVSSLVISWSLTEIIRYS 120
           EILHGL+GLVRSP++ATLPQI SRL++TWGIL+SFP+ ++H LV+SLVISWS+TEIIRYS
Sbjct: 61  EILHGLVGLVRSPVSATLPQIGSRLFLTWGILYSFPEVRSHFLVTSLVISWSITEIIRYS 120

Query: 121 FFGMKEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWN 180
           FFG KEALGFAPSW LWLRYS+FLLLYP+GITSEVGLIY ALP+IK SE Y +RMPN  N
Sbjct: 121 FFGFKEALGFAPSWHLWLRYSSFLLLYPTGITSEVGLIYLALPHIKTSEMYSVRMPNILN 180

Query: 181 FSFDYFYAAILVLGFYVPGSPHMYTYMLGQRKKALSKSKKE 221
           FSFD+FYA ILVL  YVPGSPHMY YMLGQRK+ALSKSK+E
Sbjct: 181 FSFDFFYATILVLAIYVPGSPHMYRYMLGQRKRALSKSKRE 221

Responsible for the dehydration step in very long-chain fatty acids (VLCFAs) synthesis. May be an anti-phosphatase that prevents CDKA-1 dephosphorylation and activation. Involved in the hormonal control of cell division and differentiation. Required for proliferation control of meristematic and non-meristematic cells. Negative regulator of the cell cycle.
Arabidopsis thaliana (taxid: 3702)
EC: 4EC: .EC: 2EC: .EC: 1EC: .EC: -

>sp|Q7XSZ4|PAS2A_ORYSJ Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase PASTICCINO 2A OS=Oryza sativa subsp. japonica GN=PAS2A PE=2 SV=2

 Score =  355 bits (912), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 168/211 (79%), Positives = 188/211 (89%)

Query: 1   MAGCLSLLRRLYLTAYNWTVFAGWAQVLYLALKTLNESGHENVYKAVERPLQLAQTAAVL 60
           MAG  S +RRLYL+ YNW VF GWAQVLY A+ TL ESGHE VY AVERPLQ AQTAA L
Sbjct: 1   MAGVGSAVRRLYLSVYNWAVFFGWAQVLYYAVTTLLESGHEAVYAAVERPLQFAQTAAFL 60

Query: 61  EILHGLLGLVRSPITATLPQISSRLYVTWGILWSFPQTQNHILVSSLVISWSLTEIIRYS 120
           EILHGL+GLVRSP++ATLPQI SRL++TWGILWSFP+T +HILV+SLVISWS+TEIIRYS
Sbjct: 61  EILHGLVGLVRSPVSATLPQIGSRLFLTWGILWSFPETHSHILVTSLVISWSITEIIRYS 120

Query: 121 FFGMKEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWN 180
           FFGMKEA GFAPSWLLWLRYSTF++LYP+GI+SEVGLIY ALPY+K SE YCLRMPNKWN
Sbjct: 121 FFGMKEAFGFAPSWLLWLRYSTFMVLYPTGISSEVGLIYIALPYMKASEKYCLRMPNKWN 180

Query: 181 FSFDYFYAAILVLGFYVPGSPHMYTYMLGQR 211
           FSFD+FYA+IL L  YVPGSPHM+TYML QR
Sbjct: 181 FSFDFFYASILSLAIYVPGSPHMFTYMLAQR 211

Responsible for the dehydration step in very long-chain fatty acids (VLCFAs) synthesis. May be an anti-phosphatase that prevents CDKA-1 dephosphorylation and activation. Involved in the hormonal control of cell division and differentiation. Required for proliferation control of meristematic and non-meristematic cells. Negative regulator of the cell cycle.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: -

>sp|Q5ZEJ0|PAS2B_ORYSJ Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase PASTICCINO 2B OS=Oryza sativa subsp. japonica GN=PAS2B PE=2 SV=1

 Score =  347 bits (891), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 164/211 (77%), Positives = 185/211 (87%)

Query: 1   MAGCLSLLRRLYLTAYNWTVFAGWAQVLYLALKTLNESGHENVYKAVERPLQLAQTAAVL 60
           M G  S +RRLYL+ YNW VF GWAQVLY A+ TL ESGHE VY AVERPLQ AQTAA L
Sbjct: 1   MTGVGSAVRRLYLSVYNWAVFFGWAQVLYYAVTTLLESGHEAVYAAVERPLQFAQTAAFL 60

Query: 61  EILHGLLGLVRSPITATLPQISSRLYVTWGILWSFPQTQNHILVSSLVISWSLTEIIRYS 120
           EILHGL+GLVRSP++ATLPQI SRL++TWGILWSFP+T +HILV+SLVISWS+TEIIRYS
Sbjct: 61  EILHGLVGLVRSPVSATLPQIGSRLFLTWGILWSFPETHSHILVTSLVISWSITEIIRYS 120

Query: 121 FFGMKEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWN 180
           FFGMKE  GFAPSWLLWLRYSTF++LYP+GI+SEVGLIY ALPY+K +E YCLRMPNKWN
Sbjct: 121 FFGMKETFGFAPSWLLWLRYSTFMVLYPTGISSEVGLIYIALPYMKATEKYCLRMPNKWN 180

Query: 181 FSFDYFYAAILVLGFYVPGSPHMYTYMLGQR 211
           FSFD+ YA+IL L  YVPGSPHM+TYML QR
Sbjct: 181 FSFDFSYASILSLAVYVPGSPHMFTYMLAQR 211

Responsible for the dehydration step in very long-chain fatty acids (VLCFAs) synthesis. May be an anti-phosphatase that prevents CDKA-1 dephosphorylation and activation. Involved in the hormonal control of cell division and differentiation. Required for proliferation control of meristematic and non-meristematic cells. Negative regulator of the cell cycle.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: -

>sp|Q9QY80|HACD1_MOUSE Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase 1 OS=Mus musculus GN=Ptpla PE=2 SV=1

 Score =  162 bits (411), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 84/212 (39%), Positives = 132/212 (62%), Gaps = 2/212 (0%)

Query: 5   LSLLRRLYLTAYNWTVFAGWAQVLYLALKTLNESG-HENVYKAVERPLQLAQTAAVLEIL 63
           L LL   +LT YN  + AGW  +    ++   E G H  +YK++++ L+  QT A+LE++
Sbjct: 61  LGLLATAWLTFYNIAMTAGWLVLAIAMVRFYMEKGTHRGLYKSIQKTLKFFQTFALLEVV 120

Query: 64  HGLLGLVRSPITATLPQISSRLYVTWGILWSFPQTQNHILVSSLVISWSLTEIIRYSFFG 123
           H L+G+V + +  T  Q+SSR+++ W I  S    QN   V   ++SW++TEI RYSF+ 
Sbjct: 121 HCLIGIVPTSVLVTGVQVSSRIFMVWLITHSIKPIQNEESVVLFLVSWTVTEITRYSFYT 180

Query: 124 MKEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSF 183
               L   P ++ W RY+ F++LYP G+  E+  IY ALPY+K+S  + +R+PNK+N SF
Sbjct: 181 F-SLLDHLPHFIKWARYNLFIILYPVGVAGELLTIYAALPYVKKSGMFSVRLPNKYNVSF 239

Query: 184 DYFYAAILVLGFYVPGSPHMYTYMLGQRKKAL 215
           DY+Y  ++ +  Y+P  P +Y +ML QR+K L
Sbjct: 240 DYYYFLLITMASYIPLFPQLYFHMLRQRRKVL 271

Responsible for the dehydration step in very long-chain fatty acids (VLCFAs) synthesis.

Mus musculus (taxid: 10090)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: -

>sp|Q9D3B1|HACD2_MOUSE Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase 2 OS=Mus musculus GN=Ptplb PE=2 SV=1

 Score =  161 bits (408), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 83/211 (39%), Positives = 132/211 (62%), Gaps = 2/211 (0%)

Query: 12  YLTAYNWTVFAGWAQV-LYLALKTLNESGHENVYKAVERPLQLAQTAAVLEILHGLLGLV 70
           YL  YN  + AGW  + + L    L +  + ++Y ++ERPL+  QT A+LEILH  +G+V
Sbjct: 41  YLVIYNVVMTAGWLVIAVGLVRAYLAKGSYHSLYYSIERPLKFFQTGALLEILHCAIGIV 100

Query: 71  RSPITATLPQISSRLYVTWGILWSFPQTQNHILVSSLVISWSLTEIIRYSFFGMKEALGF 130
            S +  T  Q+ SR+++ W +  S  + Q+   V   VI+W++TEIIRYSF+     L  
Sbjct: 101 PSSVVLTSFQVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTF-SLLNH 159

Query: 131 APSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSFDYFYAAI 190
            P  + W RY+ F++LYP G+T E+  IY ALP+++++  Y + +PNK+NFSFDY    I
Sbjct: 160 LPYIIKWARYTLFIVLYPMGVTGELLTIYAALPFVRQAGLYSISLPNKYNFSFDYHAFLI 219

Query: 191 LVLGFYVPGSPHMYTYMLGQRKKALSKSKKE 221
           L++  Y+P  P +Y +M+ QR+K LS +++ 
Sbjct: 220 LIMISYIPLFPQLYFHMIHQRRKVLSHTEEH 250

Responsible for the dehydration step in very long-chain fatty acids (VLCFAs) synthesis.

Mus musculus (taxid: 10090)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: -

>sp|Q4W1W1|HACD1_CANFA Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase 1 OS=Canis familiaris GN=PTPLA PE=2 SV=1

 Score =  160 bits (406), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 82/212 (38%), Positives = 133/212 (62%), Gaps = 2/212 (0%)

Query: 5   LSLLRRLYLTAYNWTVFAGWAQVLYLALKTLNESG-HENVYKAVERPLQLAQTAAVLEIL 63
           L LL  ++LT YN  + AGW  +    ++   E G H+ +YK++++ L+  QT A+LEI+
Sbjct: 29  LGLLATVWLTFYNIAMTAGWLVLAIAMVRFYMEKGTHKGLYKSIQKTLKFFQTFALLEIV 88

Query: 64  HGLLGLVRSPITATLPQISSRLYVTWGILWSFPQTQNHILVSSLVISWSLTEIIRYSFFG 123
           H L+G+V + +     Q+SSR+++ W I  S    QN   V   +++W++TEI RYSF+ 
Sbjct: 89  HCLIGIVPTSVIVAGVQVSSRIFMVWLITHSIKPIQNEESVVLFLVAWTVTEITRYSFYT 148

Query: 124 MKEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSF 183
               L   P ++ W RY+ F++LYP G+  E+  IY ALPY+K++  + +R+PNK+N SF
Sbjct: 149 F-SLLDHLPYFIKWARYNFFIILYPVGVVGELLTIYAALPYVKKTGMFSIRLPNKYNVSF 207

Query: 184 DYFYAAILVLGFYVPGSPHMYTYMLGQRKKAL 215
           DY+Y  ++ +  Y+P  P +Y +ML QR+K L
Sbjct: 208 DYYYFLLITMASYIPLFPQLYFHMLRQRRKVL 239

Responsible for the dehydration step in very long-chain fatty acids (VLCFAs) synthesis.

Canis familiaris (taxid: 9615)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: -

>sp|Q2KIP8|HACD2_BOVIN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase 2 OS=Bos taurus GN=PTPLB PE=2 SV=2

 Score =  160 bits (406), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 81/211 (38%), Positives = 133/211 (63%), Gaps = 2/211 (0%)

Query: 12  YLTAYNWTVFAGWAQV-LYLALKTLNESGHENVYKAVERPLQLAQTAAVLEILHGLLGLV 70
           YL  YN  + AGW  + + L    L +  + ++Y ++E+PL+  QT A+LEILH  +G+V
Sbjct: 41  YLVIYNVVMTAGWLVIAVGLVRAYLAKGSYHSLYYSIEKPLKFFQTGALLEILHCAIGIV 100

Query: 71  RSPITATLPQISSRLYVTWGILWSFPQTQNHILVSSLVISWSLTEIIRYSFFGMKEALGF 130
            S +  T  Q+ SR+++ W +  S  + Q+   V   VI+W++TEIIRYSF+     L  
Sbjct: 101 PSSVVLTSIQVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTF-SLLNH 159

Query: 131 APSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSFDYFYAAI 190
            P  + W RY+ F++LYP G++ E+  IY ALP+++++  Y + +PNK+NFSFDY+   I
Sbjct: 160 LPYLIKWARYTLFIVLYPMGVSGELLTIYAALPFVRQAGLYSISLPNKYNFSFDYYAFLI 219

Query: 191 LVLGFYVPGSPHMYTYMLGQRKKALSKSKKE 221
           L++  Y+P  P +Y +M+ QR+K LS +++ 
Sbjct: 220 LIMISYIPLFPQLYFHMIHQRRKILSHTEEH 250

Responsible for the dehydration step in very long-chain fatty acids (VLCFAs) synthesis.

Bos taurus (taxid: 9913)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: -

>sp|Q5RBK3|HACD2_PONAB Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase 2 OS=Pongo abelii GN=PTPLB PE=2 SV=1

 Score =  160 bits (405), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 81/211 (38%), Positives = 133/211 (63%), Gaps = 2/211 (0%)

Query: 12  YLTAYNWTVFAGWAQV-LYLALKTLNESGHENVYKAVERPLQLAQTAAVLEILHGLLGLV 70
           YL  YN  + AGW  + + L    L +  + ++Y ++E+PL+  QT A+LEILH  +G+V
Sbjct: 42  YLVIYNVVMTAGWLVIAVGLVRAYLAKGSYHSLYYSIEKPLKFFQTGALLEILHCAIGIV 101

Query: 71  RSPITATLPQISSRLYVTWGILWSFPQTQNHILVSSLVISWSLTEIIRYSFFGMKEALGF 130
            S +  T  Q+ SR+++ W +  S  + Q+   V   VI+W++TEIIRYSF+     L  
Sbjct: 102 PSSVVLTSFQVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTF-SLLNH 160

Query: 131 APSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSFDYFYAAI 190
            P  + W RY+ F++LYP G++ E+  IY ALP+++++  Y + +PNK+NFSFDY+   I
Sbjct: 161 LPYLIKWARYTLFIVLYPMGVSGELLTIYAALPFVRQAGLYSISLPNKYNFSFDYYAFLI 220

Query: 191 LVLGFYVPGSPHMYTYMLGQRKKALSKSKKE 221
           L++  Y+P  P +Y +M+ QR+K LS +++ 
Sbjct: 221 LIMISYIPIFPQLYFHMIHQRRKILSHTEEH 251

Responsible for the dehydration step in very long-chain fatty acids (VLCFAs) synthesis.

Pongo abelii (taxid: 9601)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: -

>sp|Q6Y1H2|HACD2_HUMAN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase 2 OS=Homo sapiens GN=PTPLB PE=1 SV=1

 Score =  160 bits (405), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 81/211 (38%), Positives = 133/211 (63%), Gaps = 2/211 (0%)

Query: 12  YLTAYNWTVFAGWAQV-LYLALKTLNESGHENVYKAVERPLQLAQTAAVLEILHGLLGLV 70
           YL  YN  + AGW  + + L    L +  + ++Y ++E+PL+  QT A+LEILH  +G+V
Sbjct: 41  YLVIYNVVMTAGWLVIAVGLVRAYLAKGSYHSLYYSIEKPLKFFQTGALLEILHCAIGIV 100

Query: 71  RSPITATLPQISSRLYVTWGILWSFPQTQNHILVSSLVISWSLTEIIRYSFFGMKEALGF 130
            S +  T  Q+ SR+++ W +  S  + Q+   V   VI+W++TEIIRYSF+     L  
Sbjct: 101 PSSVVLTSFQVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTF-SLLNH 159

Query: 131 APSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSFDYFYAAI 190
            P  + W RY+ F++LYP G++ E+  IY ALP+++++  Y + +PNK+NFSFDY+   I
Sbjct: 160 LPYLIKWARYTLFIVLYPMGVSGELLTIYAALPFVRQAGLYSISLPNKYNFSFDYYAFLI 219

Query: 191 LVLGFYVPGSPHMYTYMLGQRKKALSKSKKE 221
           L++  Y+P  P +Y +M+ QR+K LS +++ 
Sbjct: 220 LIMISYIPIFPQLYFHMIHQRRKILSHTEEH 250

Responsible for the dehydration step in very long-chain fatty acids (VLCFAs) synthesis.

Homo sapiens (taxid: 9606)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: -

>sp|Q9N1R5|HACD1_SHEEP Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase 1 OS=Ovis aries GN=PTPLA PE=2 SV=1

 Score =  160 bits (404), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 81/212 (38%), Positives = 133/212 (62%), Gaps = 2/212 (0%)

Query: 5   LSLLRRLYLTAYNWTVFAGWAQVLYLALKTLNESG-HENVYKAVERPLQLAQTAAVLEIL 63
           L LL  ++LT YN  + AGW  +    ++   E G H+ +YK++++ L+  QT A+LEI+
Sbjct: 68  LGLLATIWLTFYNIAMTAGWLVLAIAMVRFYMEKGTHKGLYKSIQKTLKFFQTFALLEIV 127

Query: 64  HGLLGLVRSPITATLPQISSRLYVTWGILWSFPQTQNHILVSSLVISWSLTEIIRYSFFG 123
           H L+G+V + +     Q+SSR+++ W +  S    QN   V   +++W++TEI RYSF+ 
Sbjct: 128 HCLIGIVPTSVLVAGVQVSSRIFMVWLVTHSIKPIQNEESVVLFLVAWTVTEITRYSFYT 187

Query: 124 MKEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSF 183
               L   P ++ W RY+ F++LYP G+  E+  IY ALPY+K++  + +R+PNK+N SF
Sbjct: 188 F-SLLDHLPYFIKWARYNFFIILYPVGVAGELLTIYAALPYVKKTGMFSIRLPNKYNVSF 246

Query: 184 DYFYAAILVLGFYVPGSPHMYTYMLGQRKKAL 215
           DY+Y  ++ +  Y+P  P +Y +ML QR+K L
Sbjct: 247 DYYYFLLITMASYIPLFPQLYFHMLRQRRKVL 278

Responsible for the dehydration step in very long-chain fatty acids (VLCFAs) synthesis.

Ovis aries (taxid: 9940)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: -

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	221
MGI|MGI:1353592	281	Ptpla "protein tyrosine phosph	0.950	0.747	0.382	4.8e-39
UNIPROTKB|Q4W1W1	249	PTPLA "Very-long-chain (3R)-3-	0.950	0.843	0.377	1.6e-38
MGI|MGI:1918007	254	Ptplb "protein tyrosine phosph	0.941	0.818	0.376	1.5e-37
UNIPROTKB|Q2KIP8	254	PTPLB "Very-long-chain (3R)-3-	0.959	0.834	0.364	1.9e-37
UNIPROTKB|B0YJ81	288	PTPLA "Very-long-chain (3R)-3-	0.950	0.729	0.367	2.4e-37
UNIPROTKB|Q6Y1H2	254	PTPLB "Very-long-chain (3R)-3-	0.959	0.834	0.364	2.4e-37
WB|WBGene00020517	218	hpo-8 [Caenorhabditis elegans	0.950	0.963	0.355	1.2e-33
CGD|CAL0002593	200	orf19.5156 [Candida albicans (	0.868	0.96	0.360	2.5e-26
UNIPROTKB|G1UB68	200	TPL1 "Potential protein tyrosi	0.868	0.96	0.360	2.5e-26
CGD|CAL0002594	203	orf19.5157 [Candida albicans (	0.882	0.960	0.334	2.9e-23

MGI|MGI:1353592 Ptpla "protein tyrosine phosphatase-like (proline instead of catalytic arginine), member a" [Mus musculus (taxid:10090)]

 Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
 Identities = 81/212 (38%), Positives = 125/212 (58%)

Query:     5 LSLLRRLYLTAYNWTVFAGWAQVLYLALKTLNESG-HENVYKAVERPLQLAQTAAVLEIL 63
             L LL   +LT YN  + AGW  +    ++   E G H  +YK++++ L+  QT A+LE++
Sbjct:    61 LGLLATAWLTFYNIAMTAGWLVLAIAMVRFYMEKGTHRGLYKSIQKTLKFFQTFALLEVV 120

Query:    64 HGLLGLVRSPITATLPQISSRLYVTWGILWSFPQTQNHXXXXXXXXXXXXTEIIRYSFFG 123
             H L+G+V + +  T  Q+SSR+++ W I  S    QN             TEI RYSF+ 
Sbjct:   121 HCLIGIVPTSVLVTGVQVSSRIFMVWLITHSIKPIQNEESVVLFLVSWTVTEITRYSFYT 180

Query:   124 MKEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSF 183
                 L   P ++ W RY+ F++LYP G+  E+  IY ALPY+K+S  + +R+PNK+N SF
Sbjct:   181 FS-LLDHLPHFIKWARYNLFIILYPVGVAGELLTIYAALPYVKKSGMFSVRLPNKYNVSF 239

Query:   184 DYFYAAILVLGFYVPGSPHMYTYMLGQRKKAL 215
             DY+Y  ++ +  Y+P  P +Y +ML QR+K L
Sbjct:   240 DYYYFLLITMASYIPLFPQLYFHMLRQRRKVL 271

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0006631 "fatty acid metabolic process" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016829 "lyase activity" evidence=IEA

UNIPROTKB|Q4W1W1 PTPLA "Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase 1" [Canis lupus familiaris (taxid:9615)]

 Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
 Identities = 80/212 (37%), Positives = 126/212 (59%)

Query:     5 LSLLRRLYLTAYNWTVFAGWAQVLYLALKTLNESG-HENVYKAVERPLQLAQTAAVLEIL 63
             L LL  ++LT YN  + AGW  +    ++   E G H+ +YK++++ L+  QT A+LEI+
Sbjct:    29 LGLLATVWLTFYNIAMTAGWLVLAIAMVRFYMEKGTHKGLYKSIQKTLKFFQTFALLEIV 88

Query:    64 HGLLGLVRSPITATLPQISSRLYVTWGILWSFPQTQNHXXXXXXXXXXXXTEIIRYSFFG 123
             H L+G+V + +     Q+SSR+++ W I  S    QN             TEI RYSF+ 
Sbjct:    89 HCLIGIVPTSVIVAGVQVSSRIFMVWLITHSIKPIQNEESVVLFLVAWTVTEITRYSFYT 148

Query:   124 MKEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSF 183
                 L   P ++ W RY+ F++LYP G+  E+  IY ALPY+K++  + +R+PNK+N SF
Sbjct:   149 FS-LLDHLPYFIKWARYNFFIILYPVGVVGELLTIYAALPYVKKTGMFSIRLPNKYNVSF 207

Query:   184 DYFYAAILVLGFYVPGSPHMYTYMLGQRKKAL 215
             DY+Y  ++ +  Y+P  P +Y +ML QR+K L
Sbjct:   208 DYYYFLLITMASYIPLFPQLYFHMLRQRRKVL 239

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0016829 "lyase activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0004864 "protein phosphatase inhibitor activity" evidence=IEA

MGI|MGI:1918007 Ptplb "protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b" [Mus musculus (taxid:10090)]

 Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
 Identities = 79/210 (37%), Positives = 124/210 (59%)

Query:    12 YLTAYNWTVFAGWAQVLY-LALKTLNESGHENVYKAVERPLQLAQTAAVLEILHGLLGLV 70
             YL  YN  + AGW  +   L    L +  + ++Y ++ERPL+  QT A+LEILH  +G+V
Sbjct:    41 YLVIYNVVMTAGWLVIAVGLVRAYLAKGSYHSLYYSIERPLKFFQTGALLEILHCAIGIV 100

Query:    71 RSPITATLPQISSRLYVTWGILWSFPQTQNHXXXXXXXXXXXXTEIIRYSFFGMKEALGF 130
              S +  T  Q+ SR+++ W +  S  + Q+             TEIIRYSF+     L  
Sbjct:   101 PSSVVLTSFQVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTFS-LLNH 159

Query:   131 APSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSFDYFYAAI 190
              P  + W RY+ F++LYP G+T E+  IY ALP+++++  Y + +PNK+NFSFDY    I
Sbjct:   160 LPYIIKWARYTLFIVLYPMGVTGELLTIYAALPFVRQAGLYSISLPNKYNFSFDYHAFLI 219

Query:   191 LVLGFYVPGSPHMYTYMLGQRKKALSKSKK 220
             L++  Y+P  P +Y +M+ QR+K LS +++
Sbjct:   220 LIMISYIPLFPQLYFHMIHQRRKVLSHTEE 249

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0006631 "fatty acid metabolic process" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016829 "lyase activity" evidence=IEA

UNIPROTKB|Q2KIP8 PTPLB "Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase 2" [Bos taurus (taxid:9913)]

 Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
 Identities = 78/214 (36%), Positives = 126/214 (58%)

Query:     8 LRRLYLTAYNWTVFAGWAQVLY-LALKTLNESGHENVYKAVERPLQLAQTAAVLEILHGL 66
             L   YL  YN  + AGW  +   L    L +  + ++Y ++E+PL+  QT A+LEILH  
Sbjct:    37 LTTAYLVIYNVVMTAGWLVIAVGLVRAYLAKGSYHSLYYSIEKPLKFFQTGALLEILHCA 96

Query:    67 LGLVRSPITATLPQISSRLYVTWGILWSFPQTQNHXXXXXXXXXXXXTEIIRYSFFGMKE 126
             +G+V S +  T  Q+ SR+++ W +  S  + Q+             TEIIRYSF+    
Sbjct:    97 IGIVPSSVVLTSIQVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTFS- 155

Query:   127 ALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSFDYF 186
              L   P  + W RY+ F++LYP G++ E+  IY ALP+++++  Y + +PNK+NFSFDY+
Sbjct:   156 LLNHLPYLIKWARYTLFIVLYPMGVSGELLTIYAALPFVRQAGLYSISLPNKYNFSFDYY 215

Query:   187 YAAILVLGFYVPGSPHMYTYMLGQRKKALSKSKK 220
                IL++  Y+P  P +Y +M+ QR+K LS +++
Sbjct:   216 AFLILIMISYIPLFPQLYFHMIHQRRKILSHTEE 249

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0016829 "lyase activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

UNIPROTKB|B0YJ81 PTPLA "Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase 1" [Homo sapiens (taxid:9606)]

 Score = 401 (146.2 bits), Expect = 2.4e-37, P = 2.4e-37
 Identities = 78/212 (36%), Positives = 125/212 (58%)

Query:     5 LSLLRRLYLTAYNWTVFAGWAQVLYLALKTLNESG-HENVYKAVERPLQLAQTAAVLEIL 63
             L +L   +LT Y+  + AGW  +    ++   E G H  +YK++++ L+  QT A+LEI+
Sbjct:    68 LGVLATAWLTFYDIAMTAGWLVLAIAMVRFYMEKGTHRGLYKSIQKTLKFFQTFALLEIV 127

Query:    64 HGLLGLVRSPITATLPQISSRLYVTWGILWSFPQTQNHXXXXXXXXXXXXTEIIRYSFFG 123
             H L+G+V + +  T  Q+SSR+++ W I  S    QN             TEI RYSF+ 
Sbjct:   128 HCLIGIVPTSVIVTGVQVSSRIFMVWLITHSIKPIQNEESVVLFLVAWTVTEITRYSFYT 187

Query:   124 MKEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSF 183
                 L   P ++ W RY+ F++LYP G+  E+  IY ALP++K++  + +R+PNK+N SF
Sbjct:   188 FS-LLDHLPYFIKWARYNFFIILYPVGVAGELLTIYAALPHVKKTGMFSIRLPNKYNVSF 246

Query:   184 DYFYAAILVLGFYVPGSPHMYTYMLGQRKKAL 215
             DY+Y  ++ +  Y+P  P +Y +ML QR+K L
Sbjct:   247 DYYYFLLITMASYIPLFPQLYFHMLRQRRKVL 278

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016829 "lyase activity" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0004725 "protein tyrosine phosphatase activity" evidence=TAS

GO:0006470 "protein dephosphorylation" evidence=TAS

GO:0007165 "signal transduction" evidence=NAS

GO:0035335 "peptidyl-tyrosine dephosphorylation" evidence=TAS

UNIPROTKB|Q6Y1H2 PTPLB "Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase 2" [Homo sapiens (taxid:9606)]

 Score = 401 (146.2 bits), Expect = 2.4e-37, P = 2.4e-37
 Identities = 78/214 (36%), Positives = 126/214 (58%)

Query:     8 LRRLYLTAYNWTVFAGWAQVLY-LALKTLNESGHENVYKAVERPLQLAQTAAVLEILHGL 66
             L   YL  YN  + AGW  +   L    L +  + ++Y ++E+PL+  QT A+LEILH  
Sbjct:    37 LATAYLVIYNVVMTAGWLVIAVGLVRAYLAKGSYHSLYYSIEKPLKFFQTGALLEILHCA 96

Query:    67 LGLVRSPITATLPQISSRLYVTWGILWSFPQTQNHXXXXXXXXXXXXTEIIRYSFFGMKE 126
             +G+V S +  T  Q+ SR+++ W +  S  + Q+             TEIIRYSF+    
Sbjct:    97 IGIVPSSVVLTSFQVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTFS- 155

Query:   127 ALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSFDYF 186
              L   P  + W RY+ F++LYP G++ E+  IY ALP+++++  Y + +PNK+NFSFDY+
Sbjct:   156 LLNHLPYLIKWARYTLFIVLYPMGVSGELLTIYAALPFVRQAGLYSISLPNKYNFSFDYY 215

Query:   187 YAAILVLGFYVPGSPHMYTYMLGQRKKALSKSKK 220
                IL++  Y+P  P +Y +M+ QR+K LS +++
Sbjct:   216 AFLILIMISYIPIFPQLYFHMIHQRRKILSHTEE 249

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016829 "lyase activity" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

WB|WBGene00020517 hpo-8 [Caenorhabditis elegans (taxid:6239)]

 Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
 Identities = 75/211 (35%), Positives = 118/211 (55%)

Query:    12 YLTAYNWTVFAGWAQVLYLALKTL-NESGHENVYKAVERPLQLAQTAAVLEILHGLLGLV 70
             YL AYN     GW+ +L   +  L N      +Y++VE  L++ QTAA+LE++H ++GLV
Sbjct:     6 YLVAYNVLQILGWSAILVKTVLGLANGLTWPQLYESVEFELKIFQTAAILEVIHAIVGLV 65

Query:    71 RSPITATLPQISSRLYVTWGILWSFPQTQNHXXXXXXXXXXXXTEIIRYSFFGMKEALGF 130
             RSP+  T  Q++SR+ + W IL      +              TE+IRYSF+ +      
Sbjct:    66 RSPVGTTAMQVTSRVVLVWPILHLCSTARFSIGVPLLLVAWSVTEVIRYSFYALSVLKQP 125

Query:   131 APSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSFDYFYAAI 190
              P +LL+LRY+ F +LYP G++ E+  ++ +L  + E +   L MPN+ N    +++  I
Sbjct:   126 IPYFLLYLRYTLFYVLYPMGVSGELLTLFASLNEVDEKKILTLEMPNRLNMGISFWWVLI 185

Query:   191 LVLGFYVPGSPHMYTYMLGQRKKALSKSKKE 221
             +    Y+PG P +Y YM+GQRKK L    K+
Sbjct:   186 IAALSYIPGFPQLYFYMIGQRKKILGGGSKK 216

GO:0016021 "integral to membrane" evidence=IEA

GO:0040010 "positive regulation of growth rate" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0008340 "determination of adult lifespan" evidence=IMP

GO:0040007 "growth" evidence=IMP

GO:0040011 "locomotion" evidence=IMP

GO:0032940 "secretion by cell" evidence=IMP

CGD|CAL0002593 orf19.5156 [Candida albicans (taxid:5476)]

 Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
 Identities = 76/211 (36%), Positives = 110/211 (52%)

Query:    12 YLTAYNWTVFAGWAQVLYLALKTLNESGHENVYKAVERPLQLAQTAAVLEILHGLLGLVR 71
             +L AYN    + W+ VL+  +      G   V++   +     QT AV+EI++ LLGLV+
Sbjct:     7 WLIAYNSISASLWSIVLFNTVFLSLTLGQPYVFEKTNKTTTAIQTLAVVEIVNSLLGLVK 66

Query:    72 SPITATLPQISSRLYVTWGILWSFPQTQ-N-HXXXXXXXXXXXXTEIIRYSFFGMKEALG 129
             SP+  T+ Q+ SRL + WGI    P +  N H            TEIIRYS++      G
Sbjct:    67 SPLFTTVTQVFSRLLIVWGIHQYLPDSPANYHWCYITLCLSWSITEIIRYSYYA-SNLTG 125

Query:   130 FAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSFDYFYAA 189
               P WL WLRY+TF +LYP+G+ SEV  +  +L              N+  F + +    
Sbjct:   126 QVPFWLTWLRYTTFYVLYPTGVFSEVCSVILSL--------------NEAGFYYGWILKI 171

Query:   190 ILVLGFYVPGSPHMYTYMLGQRKKALSKSKK 220
             ILV+  Y+PG   +YTYM+ QRKK L+K  +
Sbjct:   172 ILVV--YIPGFYMLYTYMIKQRKKVLNKKNQ 200

GO:0016021 "integral to membrane" evidence=ISS

GO:0000329 "fungal-type vacuole membrane" evidence=IEA

GO:0030176 "integral to endoplasmic reticulum membrane" evidence=IEA

GO:0030148 "sphingolipid biosynthetic process" evidence=IEA

GO:0007034 "vacuolar transport" evidence=IEA

GO:0004300 "enoyl-CoA hydratase activity" evidence=IEA

UNIPROTKB|G1UB68 TPL1 "Potential protein tyrosine phosphatase-like protein" [Candida albicans SC5314 (taxid:237561)]

 Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
 Identities = 76/211 (36%), Positives = 110/211 (52%)

Query:    12 YLTAYNWTVFAGWAQVLYLALKTLNESGHENVYKAVERPLQLAQTAAVLEILHGLLGLVR 71
             +L AYN    + W+ VL+  +      G   V++   +     QT AV+EI++ LLGLV+
Sbjct:     7 WLIAYNSISASLWSIVLFNTVFLSLTLGQPYVFEKTNKTTTAIQTLAVVEIVNSLLGLVK 66

Query:    72 SPITATLPQISSRLYVTWGILWSFPQTQ-N-HXXXXXXXXXXXXTEIIRYSFFGMKEALG 129
             SP+  T+ Q+ SRL + WGI    P +  N H            TEIIRYS++      G
Sbjct:    67 SPLFTTVTQVFSRLLIVWGIHQYLPDSPANYHWCYITLCLSWSITEIIRYSYYA-SNLTG 125

Query:   130 FAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSFDYFYAA 189
               P WL WLRY+TF +LYP+G+ SEV  +  +L              N+  F + +    
Sbjct:   126 QVPFWLTWLRYTTFYVLYPTGVFSEVCSVILSL--------------NEAGFYYGWILKI 171

Query:   190 ILVLGFYVPGSPHMYTYMLGQRKKALSKSKK 220
             ILV+  Y+PG   +YTYM+ QRKK L+K  +
Sbjct:   172 ILVV--YIPGFYMLYTYMIKQRKKVLNKKNQ 200

GO:0016021 "integral to membrane" evidence=ISS

CGD|CAL0002594 orf19.5157 [Candida albicans (taxid:5476)]

 Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
 Identities = 72/215 (33%), Positives = 108/215 (50%)

Query:    12 YLTAYNWTVFAGWAQVLYLALKTLNESGHENVYKAVERPLQLAQTA-AVLEILHGLLGLV 70
             YL  YN      W  +L+   +  N  G+  V +   + +   Q   + +EI H ++GLV
Sbjct:     4 YLILYNSVSAILWGYILFQCFRDWN-IGYYEVEEIPHKFMVYTQIFNSSIEIFHSMIGLV 62

Query:    71 RSPITATLPQISSRLYVTWGILWSFPQT-QNHXXXXXXXXXXX--XTEIIRYSFFGMKEA 127
              +PI   L Q  +RL +  GI    P++  N+              TE+IRY F+ +K  
Sbjct:    63 PTPIPTLLLQSFARLIIMVGICVVIPESLANYDITVFSGLTLAWSITEVIRYGFYVIK-M 121

Query:   128 LGFA-PSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSFDYF 186
              G A P WL+WLRYS FL+LYP G+  E   ++ +  Y+K       ++P     ++ YF
Sbjct:   122 FGIATPYWLVWLRYSAFLVLYPLGLVCESTTVFNSYDYVKT------KIP-----AYYYF 170

Query:   187 YAAILVLGFYVPGSPHMYTYMLGQRKKALSKSKKE 221
                 +VL  Y+PG  ++YTYM+GQR K L K K E
Sbjct:   171 LKYAIVL--YIPGFLYLYTYMIGQRTKVLKKIKAE 203

GO:0003674 "molecular_function" evidence=ND

GO:0016021 "integral to membrane" evidence=ISS

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P40857	PHS1_YEAST	4, ., 2, ., 1, ., -	0.3444	0.8597	0.8755	yes	no
Q6Y1H2	HACD2_HUMAN	4, ., 2, ., 1, ., -	0.3838	0.9457	0.8228	yes	no
O17040	HACD_CAEEL	4, ., 2, ., 1, ., 1, 3, 4	0.3791	0.9502	0.9633	yes	no
Q5RBK3	HACD2_PONAB	4, ., 2, ., 1, ., -	0.3838	0.9457	0.8196	yes	no
Q4W1W1	HACD1_CANFA	4, ., 2, ., 1, ., -	0.3867	0.9502	0.8433	yes	no
Q7XSZ4	PAS2A_ORYSJ	4, ., 2, ., 1, ., -	0.7962	0.9547	0.9547	yes	no
Q8VZB2	PAS2_ARATH	4, ., 2, ., 1, ., -	0.7873	1.0	1.0	yes	no
Q2KIP8	HACD2_BOVIN	4, ., 2, ., 1, ., -	0.3838	0.9457	0.8228	yes	no
Q5ZEJ0	PAS2B_ORYSJ	4, ., 2, ., 1, ., -	0.7772	0.9547	0.9547	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	4.2.1	0.691

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_Genewise1_v1.C_LG_VII3995	SubName- Full=Putative uncharacterized protein; (221 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	estExt_Genewise1_v1.C_LG_VIII1722	SubName- Full=Putative uncharacterized protein; (310 aa)				•		•	•		0.443
	estExt_fgenesh4_pg.C_LG_X1849	enoyl-CoA reductase (EC-1.3.1.38) (310 aa)				•		•	•		0.435

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	221
PLN02838	221	PLN02838, PLN02838, 3-hydroxyacyl-CoA dehydratase	1e-142
pfam04387	161	pfam04387, PTPLA, Protein tyrosine phosphatase-lik	3e-75
COG5198	209	COG5198, Ptpl, Protein tyrosine phosphatase-like p	1e-30

>gnl|CDD|166479 PLN02838, PLN02838, 3-hydroxyacyl-CoA dehydratase subunit of elongase

 Score =  396 bits (1018), Expect = e-142
 Identities = 188/221 (85%), Positives = 204/221 (92%)

Query: 1   MAGCLSLLRRLYLTAYNWTVFAGWAQVLYLALKTLNESGHENVYKAVERPLQLAQTAAVL 60
           MAG  SLLRRLYLT YNW VF GWAQVLYLA+ TL ESGHE VY AVERPLQLAQTAAVL
Sbjct: 1   MAGFGSLLRRLYLTVYNWVVFIGWAQVLYLAVTTLKESGHEAVYAAVERPLQLAQTAAVL 60

Query: 61  EILHGLLGLVRSPITATLPQISSRLYVTWGILWSFPQTQNHILVSSLVISWSLTEIIRYS 120
           EILHGL+GLVRSP++ATLPQI SRL++TWGILWSFP+ ++HILV+SLVISWS+TEIIRYS
Sbjct: 61  EILHGLVGLVRSPVSATLPQIGSRLFLTWGILWSFPEVRSHILVTSLVISWSITEIIRYS 120

Query: 121 FFGMKEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWN 180
           FFGMKEA GFAPSWLLWLRYSTFLLLYP+GITSEVGLIY ALPY+K SE YCLRMPNKWN
Sbjct: 121 FFGMKEAFGFAPSWLLWLRYSTFLLLYPTGITSEVGLIYIALPYMKASEKYCLRMPNKWN 180

Query: 181 FSFDYFYAAILVLGFYVPGSPHMYTYMLGQRKKALSKSKKE 221
           FSFDYFYA+ILVL  YVPGSPHMY+YMLGQRKKALSKSK+E
Sbjct: 181 FSFDYFYASILVLAIYVPGSPHMYSYMLGQRKKALSKSKRE 221

Length = 221

>gnl|CDD|202993 pfam04387, PTPLA, Protein tyrosine phosphatase-like protein, PTPLA

 Score =  224 bits (572), Expect = 3e-75
 Identities = 91/165 (55%), Positives = 116/165 (70%), Gaps = 4/165 (2%)

Query: 55  QTAAVLEILHGLLGLVRSPITATLPQISSRLYVTWGILWSFPQTQNHILVSSLVISWSLT 114
           QT AVLEILH   GLVRSP+  T  Q+SSRL+V WGIL+S P+ Q    V SL+I+WS+T
Sbjct: 1   QTLAVLEILHAAFGLVRSPVLTTFLQVSSRLFVVWGILYSLPEVQASPAVPSLLIAWSIT 60

Query: 115 EIIRYSFFGMKEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLR 174
           EIIRYS++ +   LG  P WL WLRY+ F++LYP G+ SE+ LIY +LPY   ++ Y L 
Sbjct: 61  EIIRYSYYALNL-LGTVPYWLTWLRYTLFIVLYPLGVLSELLLIYQSLPY---TKKYSLE 116

Query: 175 MPNKWNFSFDYFYAAILVLGFYVPGSPHMYTYMLGQRKKALSKSK 219
           MPN  NFSF Y+Y  I VL  Y+PG P +Y++ML QR+K L K K
Sbjct: 117 MPNALNFSFSYYYFLIFVLLLYIPGFPVLYSHMLKQRRKVLGKKK 161

This family includes the mammalian protein tyrosine phosphatase-like protein, PTPLA. A significant variation of PTPLA from other protein tyrosine phosphatases is the presence of proline instead of catalytic arginine at the active site. It is thought that PTPLA proteins have a role in the development, differentiation, and maintenance of a number of tissue types. Length = 161

>gnl|CDD|227525 COG5198, Ptpl, Protein tyrosine phosphatase-like protein (contains Pro instead of catalytic Arg) [General function prediction only]

 Score =  111 bits (280), Expect = 1e-30
 Identities = 66/209 (31%), Positives = 99/209 (47%), Gaps = 16/209 (7%)

Query: 12  YLTAYNWTVFAGWAQVLYLALKTLNESGHENVYKAVERPLQLAQTAAVLEILHGLLGLVR 71
           YL  YN      W  VL LA     ++    V+    R   L QT A++E  +   G V 
Sbjct: 9   YLRLYNTASCFIWCIVLLLASLVFYKTMDPAVFHETLRVAGLVQTFAIMEAANSSAGKVN 68

Query: 72  SPITATLPQISSRLYVTWGILWSFPQTQNHILVSSLVISWSLTEIIRYSFFGMKEALGFA 131
           S    T+ Q+ SRL++ WG+ + +    N     S+  +WS+TEI+RY+F+  +  L   
Sbjct: 69  SRYLTTVMQVISRLFIVWGVFYPYCGIINSWTYPSITTAWSITEIVRYAFYTFR--LNGI 126

Query: 132 PSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSFDYFYAAIL 191
           P+ L  LRY+ FL+LYP G  SE+  +              L       FS       I+
Sbjct: 127 PNTLRVLRYNLFLILYPIGFVSEMYCL------------RALYNAAGKIFSLLKVVLPIV 174

Query: 192 VLGFYVPGSPHMYTYMLGQRKKALSKSKK 220
           +L  Y+PG   ++++ML QRKK   K K+
Sbjct: 175 ML-LYIPGFIFLFSHMLAQRKK-SRKVKR 201

Length = 209

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	221
PLN02838	221	3-hydroxyacyl-CoA dehydratase subunit of elongase	100.0
KOG3187	223	consensus Protein tyrosine phosphatase-like protei	100.0
PF04387	164	PTPLA: Protein tyrosine phosphatase-like protein,	100.0
COG5198	209	Ptpl Protein tyrosine phosphatase-like protein (co	100.0
PF01151	250	ELO: GNS1/SUR4 family; InterPro: IPR002076 This gr	82.58

>PLN02838 3-hydroxyacyl-CoA dehydratase subunit of elongase

Probab=100.00  E-value=1.6e-79  Score=526.13  Aligned_cols=221  Identities=85%  Similarity=1.435  Sum_probs=212.2

Q ss_pred             CCcccchhhhHHHHHHhHHHHHHHHHHHHHHHHHhhhcCcchhhHhhhhHHHHHHHHHHHHHHHhhcccccCccccchhh
Q 027621            1 MAGCLSLLRRLYLTAYNWTVFAGWAQVLYLALKTLNESGHENVYKAVERPLQLAQTAAVLEILHGLLGLVRSPITATLPQ   80 (221)
Q Consensus         1 ~~~~~~~l~~~YL~~YN~~~~~gW~~il~~~~~~~~~~~~~~~~~~v~~~l~~~Q~~a~LEi~H~~~Glvrs~~~~t~~Q   80 (221)
                      ||+--++++|.||++||.+|++||++||++++.++...|.+++|+.+++.++++|++|++||+|+++|+||||+.||++|
T Consensus         1 ~~~~~~~l~~~YL~~YN~~~~~gW~~il~~~~~~~~~~~~~~~~~~v~~~l~~~QtlAilEilHa~~GlVrS~v~~T~~Q   80 (221)
T PLN02838          1 MAGFGSLLRRLYLTVYNWVVFIGWAQVLYLAVTTLKESGHEAVYAAVERPLQLAQTAAVLEILHGLVGLVRSPVSATLPQ   80 (221)
T ss_pred             CCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHhccccCCcchHHHH
Confidence            56656778999999999999999999999999998877777899999999999999999999999999999999999999


Q ss_pred             hhhcceeeeeeeccCccccchhHHHHHHHHHhhhhhhhhhhhhhhhhhCCCChhhHHhhhcccchhcchhhhHHHHHHHH
Q 027621           81 ISSRLYVTWGILWSFPQTQNHILVSSLVISWSLTEIIRYSFFGMKEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYT  160 (221)
Q Consensus        81 v~sR~~iv~~v~~~~p~~~~~~~~~~l~~aWsl~EiiRY~yY~~~l~~~~~p~~L~WLRYt~FivLYPlGv~~E~~~i~~  160 (221)
                      |+||++++|+|++..||+++++.++.|++|||++|+||||||+++++.|.+|++|+|||||+|+||||+|+.||+.+||+
T Consensus        81 V~sR~~iv~~v~~~~p~~~~~~~~~~l~~aWs~tEvIRY~yY~~~~~~~~~p~~L~WLRYt~FivLYPlGi~~E~~~i~~  160 (221)
T PLN02838         81 IGSRLFLTWGILWSFPEVRSHILVTSLVISWSITEIIRYSFFGMKEAFGFAPSWLLWLRYSTFLLLYPTGITSEVGLIYI  160 (221)
T ss_pred             HHHHHHHHHHHhhcCcchhcccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHhccceecchHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999865699999999999999999999999999999999


Q ss_pred             hchhhhhccceeecCCCCccccccHHHHHHHHHHHhhccHHHHHHHHHHHHHhhccccccC
Q 027621          161 ALPYIKESETYCLRMPNKWNFSFDYFYAAILVLGFYVPGSPHMYTYMLGQRKKALSKSKKE  221 (221)
Q Consensus       161 aLp~~~~~~~~s~~mPN~~nf~f~~~~~l~~~l~~yipg~~~ly~hM~~QRkk~l~~~~~~  221 (221)
                      |+|++++++.++.+|||++|++||+++++++++++|+||+|+||+||+|||||+++|+|+|
T Consensus       161 al~~~~~~~~~s~~~Pn~~n~sf~~~~~l~~~l~~YiPg~~~ly~hM~~QRkK~l~~k~~~  221 (221)
T PLN02838        161 ALPYMKASEKYCLRMPNKWNFSFDYFYASILVLAIYVPGSPHMYSYMLGQRKKALSKSKRE  221 (221)
T ss_pred             hchhhhcccccchhcCcccccchhHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCC
Confidence            9999999999999999999999999999999999999999999999999999999987765

>KOG3187 consensus Protein tyrosine phosphatase-like protein PTPLA (contains Pro instead of catalytic Arg) [General function prediction only]

Probab=100.00  E-value=1.4e-69  Score=461.40  Aligned_cols=219  Identities=44%  Similarity=0.754  Sum_probs=209.5

Q ss_pred             CcccchhhhHHHHHHhHHHHHHHHHHHHHHHHHhhhcC-cchhhHhhhhHHHHHHHHHHHHHHHhhcccccCccccchhh
Q 027621            2 AGCLSLLRRLYLTAYNWTVFAGWAQVLYLALKTLNESG-HENVYKAVERPLQLAQTAAVLEILHGLLGLVRSPITATLPQ   80 (221)
Q Consensus         2 ~~~~~~l~~~YL~~YN~~~~~gW~~il~~~~~~~~~~~-~~~~~~~v~~~l~~~Q~~a~LEi~H~~~Glvrs~~~~t~~Q   80 (221)
                      +.-++.+++.||++||++|++||.+++..+.....++| .+++||++++.++++|++|++|++|+.+|+|+|++.+|++|
T Consensus         2 ~~~l~~~~~~yL~~YNl~~fvgw~~~~l~~~~~~~~~~~~~~~y~si~~~l~~~Qtla~lEi~~~~~g~v~S~~v~t~~Q   81 (223)
T KOG3187|consen    2 SKELGMLKKSYLFLYNLVSFVGWIVLLLATVVLYLTKGSPAVLYDSIEKVLKFCQTLALLEIINASFGLVKSSPVVTLFQ   81 (223)
T ss_pred             CCcccchhhhhHHHHHHHHHHHHHHHHHHHHhhhccCCCccccHHHHHHHHHHHHHHHHHHHHHHHhccccCCceeeeee
Confidence            44567899999999999999999999999988777777 67799999999999999999999999999999999999999


Q ss_pred             hhhcceeeeeeeccCccccchhHHHHHHHHHhhhhhhhhhhhhhhhhhCCCChhhHHhhhcccchhcchhhhHHHHHHHH
Q 027621           81 ISSRLYVTWGILWSFPQTQNHILVSSLVISWSLTEIIRYSFFGMKEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYT  160 (221)
Q Consensus        81 v~sR~~iv~~v~~~~p~~~~~~~~~~l~~aWsl~EiiRY~yY~~~l~~~~~p~~L~WLRYt~FivLYPlGv~~E~~~i~~  160 (221)
                      |.||++++|++++..|+++++++++.++.+|+++|++||+||++++ ++..|++++|+|||+|++|||+|++||+.++++
T Consensus        82 v~sRl~il~~i~~~~~~~~~~~~~~~l~~~ws~tEIiRY~fY~f~~-~~~~p~~l~wlRYt~Fi~LYP~Gi~~E~l~i~~  160 (223)
T KOG3187|consen   82 VSSRLFILWGIFHMCSIIQASAVVFFLLIAWSLTEIIRYSFYAFNL-LGVLPKLLTWLRYTLFILLYPIGITSELLTLYA  160 (223)
T ss_pred             ecccceehhhhhhccchhhccchHHHHHHHHHHHHHHHHHHHHHHh-ccCCchhhhHhhhhhheeeecceehhhHHHHHH
Confidence            9999999999999999999999999999999999999999999996 788999999999999999999999999999999


Q ss_pred             hchhhhhccceeecCCCCccccccHHHHHHHHHHHhhccHHHHHHHHHHHHHhhccccccC
Q 027621          161 ALPYIKESETYCLRMPNKWNFSFDYFYAAILVLGFYVPGSPHMYTYMLGQRKKALSKSKKE  221 (221)
Q Consensus       161 aLp~~~~~~~~s~~mPN~~nf~f~~~~~l~~~l~~yipg~~~ly~hM~~QRkk~l~~~~~~  221 (221)
                      |+|+.++++.+|++|||++|++||+++|++++++.|+||+|++|+||.|||||++++++++
T Consensus       161 al~~~~~~~~~sv~~pn~~n~~f~~~~fL~i~ml~Yipgf~~l~~hm~~QRkk~l~~~r~~  221 (223)
T KOG3187|consen  161 ALPAAGETERFSVVMPNKLNISFDFFSFLWIVMLLYIPGFYQLYSHMLKQRKKILKKKRKK  221 (223)
T ss_pred             HHHHhcccceeEEEcCccccchhHHHHHHHHHHHHHHcchHHHHHHHHHHHHhhccccccc
Confidence            9999999999999999999999999999999999999999999999999999999987653

>PF04387 PTPLA: Protein tyrosine phosphatase-like protein, PTPLA; InterPro: IPR007482 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity

Probab=100.00  E-value=1.3e-65  Score=423.44  Aligned_cols=164  Identities=58%  Similarity=1.084  Sum_probs=161.5

Q ss_pred             HHHHHHHHHHhhcccccCccccchhhhhhcceeeeeeeccCccccchhHHHHHHHHHhhhhhhhhhhhhhhhhhCCCChh
Q 027621           55 QTAAVLEILHGLLGLVRSPITATLPQISSRLYVTWGILWSFPQTQNHILVSSLVISWSLTEIIRYSFFGMKEALGFAPSW  134 (221)
Q Consensus        55 Q~~a~LEi~H~~~Glvrs~~~~t~~Qv~sR~~iv~~v~~~~p~~~~~~~~~~l~~aWsl~EiiRY~yY~~~l~~~~~p~~  134 (221)
                      |++|++|++|+++|+||||+.+|++||+||++++|++++..||++++++++.|++|||++|+||||||++++ +|.+|++
T Consensus         1 Q~~a~lEi~h~~~Glv~S~~~~t~~Qv~sR~~vv~~v~~~~p~~~~~~~~~~l~~aWsl~EviRY~yY~~~l-~~~~p~~   79 (164)
T PF04387_consen    1 QTLAVLEILHAALGLVRSPVLTTFMQVFSRLFVVWGVIYPFPEVQSSPAVPLLLIAWSLTEVIRYPYYALKL-LGIVPYW   79 (164)
T ss_pred             CchHHHHHHHHHhccccCccHHHHHHHHHHHHeehhhhccccccccccchhhHHHHHHhhhcchhHHHHHHh-cCCCchH
Confidence            899999999999999999999999999999999999999999999999999999999999999999999996 8999999


Q ss_pred             hHHhhhcccchhcchhhhHHHHHHHHhchhhhhccceeecCCCCccccccHHHHHHHHHHHhhccHHHHHHHHHHHHHhh
Q 027621          135 LLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSFDYFYAAILVLGFYVPGSPHMYTYMLGQRKKA  214 (221)
Q Consensus       135 L~WLRYt~FivLYPlGv~~E~~~i~~aLp~~~~~~~~s~~mPN~~nf~f~~~~~l~~~l~~yipg~~~ly~hM~~QRkk~  214 (221)
                      |+|||||+|+||||+|++||+.++++|+|++++++.++.+|||++|++||+++++++++++|+||+|++|+||+|||||+
T Consensus        80 L~WLRYs~FivLYPlG~~~E~~~~~~al~~~~~~~~~~~~~pn~~n~~~~~~~~~~~~l~~y~pg~~~ly~hM~~qRrK~  159 (164)
T PF04387_consen   80 LTWLRYSAFIVLYPLGILSELLLIYRALPYIKETKRYSVRMPNSWNFSFSYYYFLIFVLLLYIPGFPFLYSHMLKQRRKK  159 (164)
T ss_pred             HHHHHHhhHhhccchHHHHHHHHHHHhCcccccCCeeeeecCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccc
Q 027621          215 LSKSK  219 (221)
Q Consensus       215 l~~~~  219 (221)
                      ++|+|
T Consensus       160 l~~~~  164 (164)
T PF04387_consen  160 LGKKK  164 (164)
T ss_pred             hccCC
Confidence            99875

Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This family includes the mammalian protein tyrosine phosphatase-like protein, PTPLA. A significant variation of PTPLA from other protein tyrosine phosphatases is the presence of proline instead of catalytic arginine at the active site. It is thought that PTPLA proteins have a role in the development, differentiation, and maintenance of a number of tissue types [].

>COG5198 Ptpl Protein tyrosine phosphatase-like protein (contains Pro instead of catalytic Arg) [General function prediction only]

Probab=100.00  E-value=4e-52  Score=339.52  Aligned_cols=194  Identities=32%  Similarity=0.502  Sum_probs=172.2

Q ss_pred             hhhHHHHHHhHHHHHHHHHHHHHHHHHhhhcCcchhhHhhhhHHHHHHHHHHHHHHHhhcccccCccccchhhhhhccee
Q 027621            8 LRRLYLTAYNWTVFAGWAQVLYLALKTLNESGHENVYKAVERPLQLAQTAAVLEILHGLLGLVRSPITATLPQISSRLYV   87 (221)
Q Consensus         8 l~~~YL~~YN~~~~~gW~~il~~~~~~~~~~~~~~~~~~v~~~l~~~Q~~a~LEi~H~~~Glvrs~~~~t~~Qv~sR~~i   87 (221)
                      ++-.||-+||++++.+|.+++.+...-+.+.+++.+|++..+...++|++|++|+.|+..|.|+|+++||.+||.||+++
T Consensus         5 l~isyl~lYN~~s~f~w~~vlll~~lv~~kt~dpa~f~et~~va~lvQt~ai~E~~ns~~g~v~S~~LtTv~Qv~SRl~i   84 (209)
T COG5198           5 LPISYLRLYNTASCFIWCIVLLLASLVFYKTMDPAVFHETLRVAGLVQTFAIMEAANSSAGKVNSRYLTTVMQVISRLFI   84 (209)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHhhhccChHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCcchhHHHHHHHHHHH
Confidence            45689999999999999999998887777777888999999999999999999999999999999999999999999999


Q ss_pred             eeeeeccCccccchhHHHHHHHHHhhhhhhhhhhhhhhhhhCCCChhhHHhhhcccchhcchhhhHHHHHHHHhchhhhh
Q 027621           88 TWGILWSFPQTQNHILVSSLVISWSLTEIIRYSFFGMKEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKE  167 (221)
Q Consensus        88 v~~v~~~~p~~~~~~~~~~l~~aWsl~EiiRY~yY~~~l~~~~~p~~L~WLRYt~FivLYPlGv~~E~~~i~~aLp~~~~  167 (221)
                      +|||++..-.+-++|.++.+.+|||++|++||.||++++ .| .|..++|+|||+|.+|||+|+++|+.+++.+.--.+.
T Consensus        85 vwgvf~p~~~~i~s~~y~s~~~aWsiteivRYafY~F~l-ng-~p~~l~~lRYNlFlilyPiG~~sE~~~~~~~~naa~~  162 (209)
T COG5198          85 VWGVFYPYCGIINSWTYPSITTAWSITEIVRYAFYTFRL-NG-IPNTLRVLRYNLFLILYPIGFVSEMYCLRALYNAAGK  162 (209)
T ss_pred             HHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHh-cC-CchhhhhhhhhhhhhhcchHHHHHHHHHHHHHHHHHH
Confidence            999996555555699999999999999999999999995 55 7999999999999999999999999999987643322


Q ss_pred             ccceeecCCCCccccccH-HHHHHHHHHHhhccHHHHHHHHHHHHHhhccc
Q 027621          168 SETYCLRMPNKWNFSFDY-FYAAILVLGFYVPGSPHMYTYMLGQRKKALSK  217 (221)
Q Consensus       168 ~~~~s~~mPN~~nf~f~~-~~~l~~~l~~yipg~~~ly~hM~~QRkk~l~~  217 (221)
                        .            +++ .-.+.+++++|+||+|+||+||++||||..+.
T Consensus       163 --~------------~Sllk~vl~~~ml~YiPGf~~lf~HMlaQRkk~~K~  199 (209)
T COG5198         163 --I------------FSLLKVVLPIVMLLYIPGFIFLFSHMLAQRKKSRKV  199 (209)
T ss_pred             --H------------HHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHH
Confidence              1            222 24566788999999999999999999998873

>PF01151 ELO: GNS1/SUR4 family; InterPro: IPR002076 This group of eukaryotic integral membrane proteins are evolutionary related, but exact function has not yet clearly been established

Probab=82.58  E-value=32  Score=29.94  Aligned_cols=125  Identities=22%  Similarity=0.274  Sum_probs=74.9

Q ss_pred             hHHHHHHhHHHHHHHHHHHHHHHHHh---h-hcC-----------cchhh--HhhhhHHHHHHHHHHHHHHHhhcccccC
Q 027621           10 RLYLTAYNWTVFAGWAQVLYLALKTL---N-ESG-----------HENVY--KAVERPLQLAQTAAVLEILHGLLGLVRS   72 (221)
Q Consensus        10 ~~YL~~YN~~~~~gW~~il~~~~~~~---~-~~~-----------~~~~~--~~v~~~l~~~Q~~a~LEi~H~~~Glvrs   72 (221)
                      |.-+.+||+++.+.=.+.+..++.+.   . ++|           +++.+  +.++...-++=.--..|.+...+=+.|.
T Consensus        36 k~~~~~~N~~l~~~S~~~~~~~~~~~~~~~~~~g~~~~~C~~~~~~~~~~~~~~~~~~~~~fylSK~~EllDTvflvLrk  115 (250)
T PF01151_consen   36 KTLIIVYNLFLVVFSAYMFYGILPALFSSLFKGGLYSSFCQPVDFDPDSYSSGRVGFWYWLFYLSKYYELLDTVFLVLRK  115 (250)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            45688999999988888777777332   1 111           11111  1222223233344588999999988999


Q ss_pred             ccccchhhhh---hcceeeeeeeccCccccchhHHHHHHHHHhhhhhhhhhhhhhhhhhCCCChhhHHhhh
Q 027621           73 PITATLPQIS---SRLYVTWGILWSFPQTQNHILVSSLVISWSLTEIIRYSFFGMKEALGFAPSWLLWLRY  140 (221)
Q Consensus        73 ~~~~t~~Qv~---sR~~iv~~v~~~~p~~~~~~~~~~l~~aWsl~EiiRY~yY~~~l~~~~~p~~L~WLRY  140 (221)
                      + ..+++|+.   +=....|......|..  +..  .....=+..-++-|+||+.. .+|.......|=||
T Consensus       116 K-~lsfLHvYHH~~~~~~~w~~~~~~~~~--~~~--~~~~~N~~VH~iMY~YY~l~-a~g~~~~~~~~k~~  180 (250)
T PF01151_consen  116 K-QLSFLHVYHHASTLLYCWISYKYGPGG--QIW--FIAALNSFVHVIMYSYYFLS-ALGIRKVPRWWKKY  180 (250)
T ss_pred             C-CcchhHHhhhhhhhhhhhheeeecccc--chh--HHHHHHHHHHHHHHHHHHHH-hcccccchhHHHHH
Confidence            8 78888887   5555666544433322  221  12233367889999999998 46754222444444

The proteins have from 290 to 435 amino acid residues. Structurally, they seem to be formed of three sections: a N-terminal region with two transmembrane domains, a central hydrophilic loop and a C-terminal region that contains from one to three transmembrane domains. Members of this family are involved in long chain fatty acid elongation systems that produce the 26-carbon precursors for ceramide and sphingolipid synthesis []. Predicted to be integral membrane proteins, in eukaryotes they are probably located on the endoplasmic reticulum. Yeast ELO3 (P40319 from SWISSPROT) affects plasma membrane H+-ATPase activity, and may act on a glucose-signalling pathway that controls the expression of several genes that are transcriptionally regulated by glucose such as PMA1 []. ; GO: 0016021 integral to membrane

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00