Citrus Sinensis ID: 027646

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220
MRMQVGAERMCMPSPSVEQFVEAVKATVLANKRWIPPSGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKEGIAPINLVVEHELHRATPGGTGGVKTIGNYAAVLKAQSAAKAKGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPAIKGTILPGITRKSIIDVAQSQGFQVEERLVTVEELLDADEVFCTGTAVVVSPVGSITYLGKR
ccHHHcccccccccccHHHHHHHHHHHHHHccccccccccccEEEccEEEEEcccccccccccEEEEEEEEccccccccccccEEEEEEccEEEccccccccccccccHHHHHHHHHHHHHccccEEEEEEcccccEEEEEcccEEEEEEccEEEcccccccccccccHHHHHHHHHHccccEEEEEEcHHHcccccEEcccccEEEEcccEEEEEcccc
ccHHHHHHHcccccccHHHHHHHHHHHHHHcHcccccccccEEEEEEEEEEccccccccccccEEEEEEEccccHccccccccEEEEEEccEEEEccccccccEccccHHHHHHHHHHHHHccccEEEEEccccccEEEEEcccEEEEEEccEEEEccccccccccHHHHHHHHHHHHccccEEccccEHHHHHcccEEEEEEcccEEEEEEEEEEcccc
mrmqvgaermcmpspsVEQFVEAVKATVLAnkrwippsgkgslyirpllmgsgavlglapapeytFLIYVspvgnyfkegiapINLVVEhelhratpggtggvkTIGNYAAVLKAQSAAKakgysdvlyLDCVHKRYLEEVSSCNIFVvkgnvistpaikgtilpgitrKSIIDVAqsqgfqveERLVTVEELLdadevfctGTAVvvspvgsitylgkr
mrmqvgaermcmpspsVEQFVEAVKATVLankrwippsgkGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKEGIAPINLVVEHELHRATPGGTGGVKTIGNYAAVLKAQSAAKAKGYSDVLYLDCVHKRYLEEVSSCNIFvvkgnvistpaikgtilpgiTRKSIIDVAQSQGFQVEERLVTVEELLDADevfctgtavvvspvgsitylgkr
MRMQVGAERMCMPSPSVEQFVEAVKATVLANKRWIPPSGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKEGIAPINLVVEHELHRATPGGTGGVKTIGNYaavlkaqsaakakGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPAIKGTILPGITRKSIIDVAQSQGFQveerlvtveellDADEVFCTGTAVVVSPVGSITYLGKR
******************QFVEAVKATVLANKRWIPPSGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKEGIAPINLVVEHELHRATPGGTGGVKTIGNYAAVLKAQSAAKAKGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPAIKGTILPGITRKSIIDVAQSQGFQVEERLVTVEELLDADEVFCTGTAVVVSPVGSITYL***
MR*QVGAERMCMPSPSVEQFVEAVKATVLANKRWIPPSGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKEGIAPINLVVEHELHRATPGGTGGVKTIGNYAAVLKAQSAAKAKGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPAIKGTILPGITRKSIIDVAQSQGFQVEERLVTVEELLDADEVFCTGTAVVVSPVGSITY****
************PSPSVEQFVEAVKATVLANKRWIPPSGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKEGIAPINLVVEHELHRATPGGTGGVKTIGNYAAVLKAQSAAKAKGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPAIKGTILPGITRKSIIDVAQSQGFQVEERLVTVEELLDADEVFCTGTAVVVSPVGSITYLGKR
MRMQVGAERMCMPSPSVEQFVEAVKATVLANKRWIPPSGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKEGIAPINLVVEHELHRATPGGTGGVKTIGNYAAVLKAQSAAKAKGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPAIKGTILPGITRKSIIDVAQSQGFQVEERLVTVEELLDADEVFCTGTAVVVSPVGSITYLG**
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MRMQVGAERMCMPSPSVEQFVEAVKATVLANKRWIPPSGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKEGIAPINLVVEHELHRATPGGTGGVKTIGNYAAVLKAQSAAKAKGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPAIKGTILPGITRKSIIDVAQSQGFQVEERLVTVEELLDADEVFCTGTAVVVSPVGSITYLGKR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query220 2.2.26 [Sep-21-2011]
Q9M401413 Branched-chain-amino-acid yes no 0.995 0.530 0.867 1e-112
Q9FYA6415 Branched-chain-amino-acid no no 1.0 0.530 0.872 1e-112
Q9M439388 Branched-chain-amino-acid no no 1.0 0.567 0.718 6e-92
Q9LPM9356 Branched-chain-amino-acid no no 0.995 0.615 0.631 2e-79
Q93Y32384 Branched-chain-amino-acid no no 1.0 0.572 0.65 1e-77
Q9LPM8367 Putative branched-chain-a no no 0.995 0.596 0.613 6e-76
Q9LE06354 Methionine aminotransfera no no 0.995 0.618 0.509 5e-65
P39576363 Branched-chain-amino-acid yes no 0.977 0.592 0.457 5e-52
O86505362 Probable branched-chain-a yes no 0.995 0.604 0.411 4e-46
Q6GJB4358 Probable branched-chain-a yes no 0.977 0.600 0.432 5e-46
>sp|Q9M401|BCAT3_ARATH Branched-chain-amino-acid aminotransferase 3, chloroplastic OS=Arabidopsis thaliana GN=BCAT3 PE=1 SV=1 Back     alignment and function desciption
 Score =  402 bits (1034), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 190/219 (86%), Positives = 209/219 (95%)

Query: 2   RMQVGAERMCMPSPSVEQFVEAVKATVLANKRWIPPSGKGSLYIRPLLMGSGAVLGLAPA 61
           RM+ GAERMCMP+P+VEQFVEAV  TVLANKRW+PP GKGSLY+RPLLMG+GAVLGLAPA
Sbjct: 157 RMRNGAERMCMPAPTVEQFVEAVTETVLANKRWVPPPGKGSLYVRPLLMGTGAVLGLAPA 216

Query: 62  PEYTFLIYVSPVGNYFKEGIAPINLVVEHELHRATPGGTGGVKTIGNYAAVLKAQSAAKA 121
           PEYTF+IYVSPVGNYFKEG+APINL+VE+E HRATPGGTGGVKTIGNYAAVLKAQS AKA
Sbjct: 217 PEYTFIIYVSPVGNYFKEGVAPINLIVENEFHRATPGGTGGVKTIGNYAAVLKAQSIAKA 276

Query: 122 KGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPAIKGTILPGITRKSIIDVAQSQGF 181
           KGYSDVLYLDC++KRYLEEVSSCNIF+VK NVISTP IKGTILPGITRKS+IDVA++QGF
Sbjct: 277 KGYSDVLYLDCIYKRYLEEVSSCNIFIVKDNVISTPEIKGTILPGITRKSMIDVARTQGF 336

Query: 182 QVEERLVTVEELLDADEVFCTGTAVVVSPVGSITYLGKR 220
           QVEER VTV+ELL+ADEVFCTGTAVVVSPVGS+TY GKR
Sbjct: 337 QVEERNVTVDELLEADEVFCTGTAVVVSPVGSVTYKGKR 375
Converts 2-oxo acids to branched-chain amino acids. Acts on leucine, isoleucine and valine.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 6EC: .EC: 1EC: .EC: 4EC: 2
>sp|Q9FYA6|BCAT5_ARATH Branched-chain-amino-acid aminotransferase 5, chloroplastic OS=Arabidopsis thaliana GN=BCAT5 PE=1 SV=1 Back     alignment and function description
>sp|Q9M439|BCAT2_ARATH Branched-chain-amino-acid aminotransferase 2, chloroplastic OS=Arabidopsis thaliana GN=BCAT2 PE=1 SV=1 Back     alignment and function description
>sp|Q9LPM9|BCAT6_ARATH Branched-chain-amino-acid aminotransferase 6 OS=Arabidopsis thaliana GN=BCAT6 PE=1 SV=1 Back     alignment and function description
>sp|Q93Y32|BCAT1_ARATH Branched-chain-amino-acid aminotransferase 1, mitochondrial OS=Arabidopsis thaliana GN=BCAT1 PE=1 SV=2 Back     alignment and function description
>sp|Q9LPM8|BCAT7_ARATH Putative branched-chain-amino-acid aminotransferase 7 OS=Arabidopsis thaliana GN=BCAT7 PE=5 SV=1 Back     alignment and function description
>sp|Q9LE06|BCAT4_ARATH Methionine aminotransferase BCAT4 OS=Arabidopsis thaliana GN=BCAT4 PE=1 SV=1 Back     alignment and function description
>sp|P39576|ILVE2_BACSU Branched-chain-amino-acid aminotransferase 2 OS=Bacillus subtilis (strain 168) GN=ilvK PE=1 SV=5 Back     alignment and function description
>sp|O86505|ILVE_STRCO Probable branched-chain-amino-acid aminotransferase OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) GN=ilvE PE=3 SV=1 Back     alignment and function description
>sp|Q6GJB4|ILVE_STAAR Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus aureus (strain MRSA252) GN=ilvE PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query220
363807226 412 uncharacterized protein LOC100798328 [Gl 1.0 0.533 0.931 1e-117
357482487 408 Branched-chain-amino-acid aminotransfera 1.0 0.539 0.927 1e-116
356497021 406 PREDICTED: branched-chain-amino-acid ami 1.0 0.541 0.913 1e-116
255689399 329 branched-chain amino acid aminotransfera 1.0 0.668 0.918 1e-115
449451331 405 PREDICTED: branched-chain-amino-acid ami 1.0 0.543 0.913 1e-115
388497704 411 unknown [Lotus japonicus] 1.0 0.535 0.9 1e-114
255579513 417 branched-chain amino acid aminotransfera 1.0 0.527 0.9 1e-114
6319167 377 branched-chain amino acid aminotransfera 0.995 0.580 0.899 1e-112
407317195 408 plastid branched-chain aminotransferase 1.0 0.539 0.890 1e-111
6319165 418 branched-chain amino acid aminotransfera 1.0 0.526 0.890 1e-111
>gi|363807226|ref|NP_001242355.1| uncharacterized protein LOC100798328 [Glycine max] gi|255635824|gb|ACU18260.1| unknown [Glycine max] Back     alignment and taxonomy information
 Score =  426 bits (1094), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 205/220 (93%), Positives = 216/220 (98%)

Query: 1   MRMQVGAERMCMPSPSVEQFVEAVKATVLANKRWIPPSGKGSLYIRPLLMGSGAVLGLAP 60
           +RMQ+GAERMCMPSP+VEQFVEAVK TVLANKRW+PP+GKGSLYIRPLLMGSG VLGLAP
Sbjct: 156 LRMQIGAERMCMPSPTVEQFVEAVKETVLANKRWVPPAGKGSLYIRPLLMGSGPVLGLAP 215

Query: 61  APEYTFLIYVSPVGNYFKEGIAPINLVVEHELHRATPGGTGGVKTIGNYAAVLKAQSAAK 120
           APEYTFLIYVSPVGNYFKEG+APINL+VE+ELHRATPGGTGGVKTIGNYAAVLKAQS AK
Sbjct: 216 APEYTFLIYVSPVGNYFKEGLAPINLIVENELHRATPGGTGGVKTIGNYAAVLKAQSEAK 275

Query: 121 AKGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPAIKGTILPGITRKSIIDVAQSQG 180
           AKGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPAIKGTILPGITRKSIIDVA+SQG
Sbjct: 276 AKGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPAIKGTILPGITRKSIIDVARSQG 335

Query: 181 FQVEERLVTVEELLDADEVFCTGTAVVVSPVGSITYLGKR 220
           FQVEERLV+V+ELLDADEVFCTGTAVVVSPVGSITYL KR
Sbjct: 336 FQVEERLVSVDELLDADEVFCTGTAVVVSPVGSITYLDKR 375

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|357482487|ref|XP_003611530.1| Branched-chain-amino-acid aminotransferase [Medicago truncatula] gi|355512865|gb|AES94488.1| Branched-chain-amino-acid aminotransferase [Medicago truncatula] Back     alignment and taxonomy information
>gi|356497021|ref|XP_003517363.1| PREDICTED: branched-chain-amino-acid aminotransferase 3, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|255689399|gb|ACU30051.1| branched-chain amino acid aminotransferase, partial [Glycine max] Back     alignment and taxonomy information
>gi|449451331|ref|XP_004143415.1| PREDICTED: branched-chain-amino-acid aminotransferase 3, chloroplastic-like [Cucumis sativus] gi|449519406|ref|XP_004166726.1| PREDICTED: branched-chain-amino-acid aminotransferase 3, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|388497704|gb|AFK36918.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|255579513|ref|XP_002530599.1| branched-chain amino acid aminotransferase, putative [Ricinus communis] gi|223529847|gb|EEF31779.1| branched-chain amino acid aminotransferase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|6319167|gb|AAF07192.1|AF193846_1 branched-chain amino acid aminotransferase [Solanum tuberosum] Back     alignment and taxonomy information
>gi|407317195|gb|AFU07635.1| plastid branched-chain aminotransferase 2 [Humulus lupulus] Back     alignment and taxonomy information
>gi|6319165|gb|AAF07191.1|AF193845_1 branched-chain amino acid aminotransferase [Solanum tuberosum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query220
TAIR|locus:2097320413 BCAT3 "branched-chain aminotra 0.995 0.530 0.767 1.7e-89
TAIR|locus:2201921388 BCAT-2 "branched-chain amino a 1.0 0.567 0.659 8.1e-76
TAIR|locus:2031030356 AT1G50110 [Arabidopsis thalian 0.995 0.615 0.572 2.5e-65
TAIR|locus:2201931384 BCAT-1 "branched-chain amino a 1.0 0.572 0.590 4.2e-63
TAIR|locus:2031040367 BCAT7 "branched-chain amino ac 0.995 0.596 0.563 6.9e-63
TAIR|locus:2091216354 BCAT4 "branched-chain aminotra 0.995 0.618 0.472 2.1e-54
TIGR_CMR|GSU_0656357 GSU_0656 "branched-chain amino 0.990 0.610 0.383 2.1e-38
UNIPROTKB|A0R066368 ilvE "Branched-chain-amino-aci 0.977 0.584 0.353 1.7e-36
UNIPROTKB|Q10399368 ilvE "Branched-chain-amino-aci 0.977 0.584 0.353 2.8e-34
ZFIN|ZDB-GENE-030131-9358385 bcat1 "branched chain aminotra 0.981 0.561 0.367 2.7e-29
TAIR|locus:2097320 BCAT3 "branched-chain aminotransferase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 893 (319.4 bits), Expect = 1.7e-89, P = 1.7e-89
 Identities = 168/219 (76%), Positives = 186/219 (84%)

Query:     2 RMQVGAERMCMPSPSVEQFVEAVKATVLANKRWIPPSGKGSLYIRPLLMGSGAVLGLAPA 61
             RM+ GAERMCMP+P+VEQFVEAV  TVLANKRW+PP GKGSLY+RPLLMG+GAVLGLAPA
Sbjct:   157 RMRNGAERMCMPAPTVEQFVEAVTETVLANKRWVPPPGKGSLYVRPLLMGTGAVLGLAPA 216

Query:    62 PEYTFLIYVSPVGNYFKEGIAPINLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXX 121
             PEYTF+IYVSPVGNYFKEG+APINL+VE+E HRATPGGTGGVKTIGNY            
Sbjct:   217 PEYTFIIYVSPVGNYFKEGVAPINLIVENEFHRATPGGTGGVKTIGNYAAVLKAQSIAKA 276

Query:   122 XGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPAIKGTILPGITRKSIIDVAQSQGF 181
              GYSDVLYLDC++KRYLEEVSSCNIF+VK NVISTP IKGTILPGITRKS+IDVA++QGF
Sbjct:   277 KGYSDVLYLDCIYKRYLEEVSSCNIFIVKDNVISTPEIKGTILPGITRKSMIDVARTQGF 336

Query:   182 QXXXXXXXXXXXXDADEVFCTGTAVVVSPVGSITYLGKR 220
             Q            +ADEVFCTGTAVVVSPVGS+TY GKR
Sbjct:   337 QVEERNVTVDELLEADEVFCTGTAVVVSPVGSVTYKGKR 375
GO:0003824 "catalytic activity" evidence=IEA;ISS
GO:0004084 "branched-chain-amino-acid transaminase activity" evidence=IEA;IGI
GO:0008152 "metabolic process" evidence=IEA
GO:0009081 "branched-chain amino acid metabolic process" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0005829 "cytosol" evidence=RCA
GO:0009407 "toxin catabolic process" evidence=RCA
GO:0019932 "second-messenger-mediated signaling" evidence=RCA
TAIR|locus:2201921 BCAT-2 "branched-chain amino acid transaminase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031030 AT1G50110 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2201931 BCAT-1 "branched-chain amino acid transaminase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031040 BCAT7 "branched-chain amino acid transaminase 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2091216 BCAT4 "branched-chain aminotransferase4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_0656 GSU_0656 "branched-chain amino acid aminotransferase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
UNIPROTKB|A0R066 ilvE "Branched-chain-amino-acid aminotransferase" [Mycobacterium smegmatis str. MC2 155 (taxid:246196)] Back     alignment and assigned GO terms
UNIPROTKB|Q10399 ilvE "Branched-chain-amino-acid aminotransferase" [Mycobacterium tuberculosis (taxid:1773)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-9358 bcat1 "branched chain aminotransferase 1, cytosolic" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9M401BCAT3_ARATH2, ., 6, ., 1, ., 4, 20.86750.99540.5302yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.6.10.921
4th Layer2.6.1.420.914

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
gw1.VII.52.1
branched-chain amino acid aminotransferase (EC-2.6.1.42) (338 aa)
(Populus trichocarpa)
Predicted Functional Partners:
gw1.V.3049.1
2-isopropylmalate synthase (EC-2.3.3.13) (545 aa)
•    •• 0.976
estExt_fgenesh4_pm.C_LG_III0598
hypothetical protein (605 aa)
•  •••• 0.967
estExt_fgenesh4_pg.C_LG_I0451
hypothetical protein (611 aa)
•  •••• 0.967
gw1.XI.1444.1
aminoacyl-tRNA ligase (EC-6.1.1.4) (889 aa)
     •• 0.929
fgenesh4_pg.C_LG_II002297
aminoacyl-tRNA ligase (EC-6.1.1.9) (951 aa)
     •• 0.919
estExt_fgenesh4_pg.C_LG_VII1280
SubName- Full=Putative uncharacterized protein; (1054 aa)
     •• 0.907
gw1.X.4012.1
isoleucyl-tRNA synthetase (1029 aa)
     •• 0.907
eugene3.00050267
aminoacyl-tRNA ligase (EC-6.1.1.9) (1046 aa)
     •• 0.906
gw1.III.165.1
hypothetical protein (320 aa)
     •  0.902
eugene3.00860050
aminoacyl-tRNA ligase (EC-6.1.1.4) (1087 aa)
   • •• 0.902

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query220
PLN02782403 PLN02782, PLN02782, Branched-chain amino acid amin 1e-173
PLN02259388 PLN02259, PLN02259, branched-chain-amino-acid amin 1e-115
PLN03117355 PLN03117, PLN03117, Branched-chain-amino-acid amin 1e-109
PRK13357356 PRK13357, PRK13357, branched-chain amino acid amin 1e-108
cd01557279 cd01557, BCAT_beta_family, BCAT_beta_family: Branc 1e-101
PLN02883384 PLN02883, PLN02883, Branched-chain amino acid amin 5e-96
TIGR01123313 TIGR01123, ilvE_II, branched-chain amino acid amin 1e-79
cd00449256 cd00449, PLPDE_IV, PyridoxaL 5'-Phosphate Dependen 1e-73
COG0115284 COG0115, IlvE, Branched-chain amino acid aminotran 2e-60
pfam01063231 pfam01063, Aminotran_4, Aminotransferase class IV 4e-41
PRK06606306 PRK06606, PRK06606, branched-chain amino acid amin 4e-34
TIGR01122298 TIGR01122, ilvE_I, branched-chain amino acid amino 3e-31
cd01558270 cd01558, D-AAT_like, D-Alanine aminotransferase (D 2e-26
PRK07544292 PRK07544, PRK07544, branched-chain amino acid amin 4e-23
cd01559249 cd01559, ADCL_like, ADCL_like: 4-Amino-4-deoxychor 3e-21
PRK08320288 PRK08320, PRK08320, branched-chain amino acid amin 5e-21
PRK13356286 PRK13356, PRK13356, aminotransferase; Provisional 3e-20
PRK06680286 PRK06680, PRK06680, D-amino acid aminotransferase; 2e-18
PRK07849292 PRK07849, PRK07849, 4-amino-4-deoxychorismate lyas 3e-17
TIGR01121276 TIGR01121, D_amino_aminoT, D-amino acid aminotrans 7e-17
PRK07650283 PRK07650, PRK07650, 4-amino-4-deoxychorismate lyas 2e-15
TIGR03461261 TIGR03461, pabC_Proteo, aminodeoxychorismate lyase 2e-13
PRK06092268 PRK06092, PRK06092, 4-amino-4-deoxychorismate lyas 3e-12
PRK12479299 PRK12479, PRK12479, branched-chain amino acid amin 7e-12
PRK12400290 PRK12400, PRK12400, D-amino acid aminotransferase; 2e-07
>gnl|CDD|215418 PLN02782, PLN02782, Branched-chain amino acid aminotransferase Back     alignment and domain information 
 Score =  482 bits (1242), Expect = e-173
 Identities = 199/220 (90%), Positives = 212/220 (96%)

Query: 1   MRMQVGAERMCMPSPSVEQFVEAVKATVLANKRWIPPSGKGSLYIRPLLMGSGAVLGLAP 60
           +RM+ GAERMCMP+P+VEQFVEAVK TVLANKRW+PP GKGSLYIRPLLMGSGAVLGLAP
Sbjct: 146 IRMRNGAERMCMPAPTVEQFVEAVKETVLANKRWVPPPGKGSLYIRPLLMGSGAVLGLAP 205

Query: 61  APEYTFLIYVSPVGNYFKEGIAPINLVVEHELHRATPGGTGGVKTIGNYAAVLKAQSAAK 120
           APEYTFLIYVSPVGNYFKEG+APINL+VE+E HRATPGGTGGVKTIGNYAAVLKAQS AK
Sbjct: 206 APEYTFLIYVSPVGNYFKEGVAPINLIVENEFHRATPGGTGGVKTIGNYAAVLKAQSIAK 265

Query: 121 AKGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPAIKGTILPGITRKSIIDVAQSQG 180
           AKGYSDVLYLDCVHK+YLEEVSSCNIF+VK NVISTPAIKGTILPGITRKSIIDVA+SQG
Sbjct: 266 AKGYSDVLYLDCVHKKYLEEVSSCNIFIVKDNVISTPAIKGTILPGITRKSIIDVARSQG 325

Query: 181 FQVEERLVTVEELLDADEVFCTGTAVVVSPVGSITYLGKR 220
           FQVEER VTV+ELL+ADEVFCTGTAVVVSPVGSITY GKR
Sbjct: 326 FQVEERNVTVDELLEADEVFCTGTAVVVSPVGSITYKGKR 365

Length = 403
>gnl|CDD|177901 PLN02259, PLN02259, branched-chain-amino-acid aminotransferase 2 Back     alignment and domain information
>gnl|CDD|178664 PLN03117, PLN03117, Branched-chain-amino-acid aminotransferase; Provisional Back     alignment and domain information
>gnl|CDD|237363 PRK13357, PRK13357, branched-chain amino acid aminotransferase; Provisional Back     alignment and domain information
>gnl|CDD|238798 cd01557, BCAT_beta_family, BCAT_beta_family: Branched-chain aminotransferase catalyses the transamination of the branched-chain amino acids leusine, isoleucine and valine to their respective alpha-keto acids, alpha-ketoisocaproate, alpha-keto-beta-methylvalerate and alpha-ketoisovalerate Back     alignment and domain information
>gnl|CDD|178471 PLN02883, PLN02883, Branched-chain amino acid aminotransferase Back     alignment and domain information
>gnl|CDD|233278 TIGR01123, ilvE_II, branched-chain amino acid aminotransferase, group II Back     alignment and domain information
>gnl|CDD|238254 cd00449, PLPDE_IV, PyridoxaL 5'-Phosphate Dependent Enzymes class IV (PLPDE_IV) Back     alignment and domain information
>gnl|CDD|223193 COG0115, IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|216275 pfam01063, Aminotran_4, Aminotransferase class IV Back     alignment and domain information
>gnl|CDD|235841 PRK06606, PRK06606, branched-chain amino acid aminotransferase; Validated Back     alignment and domain information
>gnl|CDD|130192 TIGR01122, ilvE_I, branched-chain amino acid aminotransferase, group I Back     alignment and domain information
>gnl|CDD|238799 cd01558, D-AAT_like, D-Alanine aminotransferase (D-AAT_like): D-amino acid aminotransferase catalyzes transamination between D-amino acids and their respective alpha-keto acids Back     alignment and domain information
>gnl|CDD|181025 PRK07544, PRK07544, branched-chain amino acid aminotransferase; Validated Back     alignment and domain information
>gnl|CDD|238800 cd01559, ADCL_like, ADCL_like: 4-Amino-4-deoxychorismate lyase: is a member of the fold-type IV of PLP dependent enzymes that converts 4-amino-4-deoxychorismate (ADC) to p-aminobenzoate and pyruvate Back     alignment and domain information
>gnl|CDD|236238 PRK08320, PRK08320, branched-chain amino acid aminotransferase; Reviewed Back     alignment and domain information
>gnl|CDD|237362 PRK13356, PRK13356, aminotransferase; Provisional Back     alignment and domain information
>gnl|CDD|180656 PRK06680, PRK06680, D-amino acid aminotransferase; Reviewed Back     alignment and domain information
>gnl|CDD|236114 PRK07849, PRK07849, 4-amino-4-deoxychorismate lyase; Provisional Back     alignment and domain information
>gnl|CDD|130191 TIGR01121, D_amino_aminoT, D-amino acid aminotransferase Back     alignment and domain information
>gnl|CDD|181067 PRK07650, PRK07650, 4-amino-4-deoxychorismate lyase; Provisional Back     alignment and domain information
>gnl|CDD|132501 TIGR03461, pabC_Proteo, aminodeoxychorismate lyase Back     alignment and domain information
>gnl|CDD|235696 PRK06092, PRK06092, 4-amino-4-deoxychorismate lyase; Reviewed Back     alignment and domain information
>gnl|CDD|183549 PRK12479, PRK12479, branched-chain amino acid aminotransferase; Provisional Back     alignment and domain information
>gnl|CDD|171470 PRK12400, PRK12400, D-amino acid aminotransferase; Reviewed Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 220
PLN02259388 branched-chain-amino-acid aminotransferase 2 100.0
PLN02883384 Branched-chain amino acid aminotransferase 100.0
PLN02782403 Branched-chain amino acid aminotransferase 100.0
PLN03117355 Branched-chain-amino-acid aminotransferase; Provis 100.0
cd01557279 BCAT_beta_family BCAT_beta_family: Branched-chain 100.0
PRK13357356 branched-chain amino acid aminotransferase; Provis 100.0
TIGR01122298 ilvE_I branched-chain amino acid aminotransferase, 100.0
TIGR01123313 ilvE_II branched-chain amino acid aminotransferase 100.0
PRK06606306 branched-chain amino acid aminotransferase; Valida 100.0
PRK12479299 branched-chain amino acid aminotransferase; Provis 100.0
cd00449256 PLPDE_IV PyridoxaL 5'-Phosphate Dependent Enzymes 100.0
PRK13356286 aminotransferase; Provisional 100.0
KOG0975379 consensus Branched chain aminotransferase BCAT1, p 100.0
PRK07544292 branched-chain amino acid aminotransferase; Valida 100.0
PRK08320288 branched-chain amino acid aminotransferase; Review 100.0
cd01559249 ADCL_like ADCL_like: 4-Amino-4-deoxychorismate lya 100.0
PRK07650283 4-amino-4-deoxychorismate lyase; Provisional 100.0
TIGR03461261 pabC_Proteo aminodeoxychorismate lyase. Members of 100.0
PRK06092268 4-amino-4-deoxychorismate lyase; Reviewed 100.0
cd01558270 D-AAT_like D-Alanine aminotransferase (D-AAT_like) 100.0
PRK12400290 D-amino acid aminotransferase; Reviewed 100.0
PRK07849292 4-amino-4-deoxychorismate lyase; Provisional 100.0
PLN02845336 Branched-chain-amino-acid aminotransferase-like pr 100.0
COG0115284 IlvE Branched-chain amino acid aminotransferase/4- 100.0
PRK06680286 D-amino acid aminotransferase; Reviewed 100.0
TIGR01121276 D_amino_aminoT D-amino acid aminotransferase. Spec 100.0
PRK09266266 hypothetical protein; Provisional 100.0
PF01063231 Aminotran_4: Aminotransferase class IV; InterPro: 100.0
PRK07546209 hypothetical protein; Provisional 100.0
PRK07101187 hypothetical protein; Provisional 99.96
>PLN02259 branched-chain-amino-acid aminotransferase 2 Back     alignment and domain information 
Probab=100.00  E-value=2.6e-50  Score=350.58  Aligned_cols=219  Identities=72%  Similarity=1.188  Sum_probs=200.2

Q ss_pred             ChHHhHHhhcCCCCCCHHHHHHHHHHHHHHccCcCCCCCCccEEEEEEEEecCCccCCCCCCCeeEEEEEecCcccccCC
Q 027646            1 MRMQVGAERMCMPSPSVEQFVEAVKATVLANKRWIPPSGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKEG   80 (220)
Q Consensus         1 ~RL~~sa~~l~i~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~ir~~~~g~~~~~g~~~~~~~~~~i~~~p~~~~~~~g   80 (220)
                      +||.+||++|+||.|+.++|.+.+.++++.|+.|+|+.+.+.+|+|++++|+++.+|+.++..+++++++.|.++++..|
T Consensus       132 ~RL~~SA~rL~lp~~~~e~~~~~i~~lv~~n~~~vp~~~~~~lyiRp~v~g~~~~lG~~p~~~~~~~i~~~p~~~~~~~g  211 (388)
T PLN02259        132 IRMKLGAERMLMPSPSVDQFVNAVKQTALANKRWVPPAGKGTLYIRPLLMGSGPILGLGPAPEYTFIVYASPVGNYFKEG  211 (388)
T ss_pred             HHHHHhHHHhCCCCcCHHHHHHHHHHHHHhccccCCCCCCceEEEEEEEEecCCccCcCCCCCcEEEEEEEechhhhhcC
Confidence            59999999999998889999999999999999888876667899999888877667887767788999999988777778


Q ss_pred             ccceEEEeecceeecCCCCCCCcccccchHHHHHHHHHHHHCCCCeEEEeecCCCceEEEcCceEEEEEECCEEEcCCCC
Q 027646           81 IAPINLVVEHELHRATPGGTGGVKTIGNYAAVLKAQSAAKAKGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPAIK  160 (220)
Q Consensus        81 ~~~~~l~~~~~~~r~~~~~l~~~Kt~~~~~~~~~a~~~a~~~g~de~l~ld~~~~g~v~E~~~sNif~~~~~~l~TP~l~  160 (220)
                      ++++++.+.+++.|..|..++++|+++||+++++++++|+++|+||+||+|..++|+|+|++++|+|++++++|+||+++
T Consensus       212 ~~~i~l~v~~~~~Ra~p~~~g~~K~~~NY~~~l~a~~eA~~~G~de~L~Ld~~~~g~V~E~~~sNlF~v~~~~l~TP~l~  291 (388)
T PLN02259        212 MAALNLYVEEEYVRAAPGGAGGVKSITNYAPVLKALSRAKSRGFSDVLYLDSVKKKYLEEASSCNVFVVKGRTISTPATN  291 (388)
T ss_pred             cceEEEEeecceeccCCCCCcccchhhhHHHHHHHHHHHHHcCCCEEEEecCCCCCEEEEcCcEEEEEEECCEEEcCCCc
Confidence            87777776666789888888999998899999999999999999999999953479999999999999999999999999


Q ss_pred             CCCCCchHHHHHHHHHHhCCCeEEEEecCHHHHhccceeeeecCcceeEEeEEEeeCCC
Q 027646          161 GTILPGITRKSIIDVAQSQGFQVEERLVTVEELLDADEVFCTGTAVVVSPVGSITYLGK  219 (220)
Q Consensus       161 ~~~L~GitR~~ll~~a~~~g~~v~e~~i~~~eL~~ade~f~tns~~gi~pV~~i~~~~~  219 (220)
                      .+||+||||+.|+++|+++|++|+|+.++++||.+|||+|+|||+.+|+||++|+++++
T Consensus       292 ~~iL~GITR~sIl~la~~~G~~V~Er~i~~~eL~~AdEvF~tgTa~~V~PV~~I~~~~~  350 (388)
T PLN02259        292 GTILEGITRKSVMEIASDQGYQVVEKAVHVDEVMDADEVFCTGTAVVVAPVGTITYQEK  350 (388)
T ss_pred             CCcCcCHHHHHHHHHHHHCCCeEEEEECCHHHHHhCCEEEEcCCcceEEEEEEEecCCc
Confidence            99999999999999999999999999999999999999999999999999999998654

>PLN02883 Branched-chain amino acid aminotransferase Back     alignment and domain information
>PLN02782 Branched-chain amino acid aminotransferase Back     alignment and domain information
>PLN03117 Branched-chain-amino-acid aminotransferase; Provisional Back     alignment and domain information
>cd01557 BCAT_beta_family BCAT_beta_family: Branched-chain aminotransferase catalyses the transamination of the branched-chain amino acids leusine, isoleucine and valine to their respective alpha-keto acids, alpha-ketoisocaproate, alpha-keto-beta-methylvalerate and alpha-ketoisovalerate Back     alignment and domain information
>PRK13357 branched-chain amino acid aminotransferase; Provisional Back     alignment and domain information
>TIGR01122 ilvE_I branched-chain amino acid aminotransferase, group I Back     alignment and domain information
>TIGR01123 ilvE_II branched-chain amino acid aminotransferase, group II Back     alignment and domain information
>PRK06606 branched-chain amino acid aminotransferase; Validated Back     alignment and domain information
>PRK12479 branched-chain amino acid aminotransferase; Provisional Back     alignment and domain information
>cd00449 PLPDE_IV PyridoxaL 5'-Phosphate Dependent Enzymes class IV (PLPDE_IV) Back     alignment and domain information
>PRK13356 aminotransferase; Provisional Back     alignment and domain information
>KOG0975 consensus Branched chain aminotransferase BCAT1, pyridoxal phosphate enzymes type IV superfamily [Amino acid transport and metabolism] Back     alignment and domain information
>PRK07544 branched-chain amino acid aminotransferase; Validated Back     alignment and domain information
>PRK08320 branched-chain amino acid aminotransferase; Reviewed Back     alignment and domain information
>cd01559 ADCL_like ADCL_like: 4-Amino-4-deoxychorismate lyase: is a member of the fold-type IV of PLP dependent enzymes that converts 4-amino-4-deoxychorismate (ADC) to p-aminobenzoate and pyruvate Back     alignment and domain information
>PRK07650 4-amino-4-deoxychorismate lyase; Provisional Back     alignment and domain information
>TIGR03461 pabC_Proteo aminodeoxychorismate lyase Back     alignment and domain information
>PRK06092 4-amino-4-deoxychorismate lyase; Reviewed Back     alignment and domain information
>cd01558 D-AAT_like D-Alanine aminotransferase (D-AAT_like): D-amino acid aminotransferase catalyzes transamination between D-amino acids and their respective alpha-keto acids Back     alignment and domain information
>PRK12400 D-amino acid aminotransferase; Reviewed Back     alignment and domain information
>PRK07849 4-amino-4-deoxychorismate lyase; Provisional Back     alignment and domain information
>PLN02845 Branched-chain-amino-acid aminotransferase-like protein Back     alignment and domain information
>COG0115 IlvE Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>PRK06680 D-amino acid aminotransferase; Reviewed Back     alignment and domain information
>TIGR01121 D_amino_aminoT D-amino acid aminotransferase Back     alignment and domain information
>PRK09266 hypothetical protein; Provisional Back     alignment and domain information
>PF01063 Aminotran_4: Aminotransferase class IV; InterPro: IPR001544 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue Back     alignment and domain information
>PRK07546 hypothetical protein; Provisional Back     alignment and domain information
>PRK07101 hypothetical protein; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query220
3jz6_A373 Crystal Structure Of Mycobacterium Smegmatis Branch 5e-38
4dqn_A345 Crystal Structure Of The Branched-Chain Aminotransf 5e-38
3dtf_A372 Structural Analysis Of Mycobacterial Branched Chain 5e-38
3ht5_A368 Crystal Structure Of Ilve A Branched Chain Amino Ac 5e-36
3uyy_A358 Crystal Structures Of Branched-Chain Aminotransfera 7e-31
2hdk_A365 Crystal Structure Of Cys315ala-Cys318ala Mutant Of 6e-25
2hgw_A365 Crystal Structure Of Cys318ala Mutant Of Human Mito 7e-25
2abj_A366 Crystal Structure Of Human Branched Chain Amino Aci 1e-24
2hg8_A365 Crystal Structure Of Cys315ala Mutant Of Human Mito 1e-24
1ekf_A365 Crystallographic Structure Of Human Branched Chain 1e-24
2cog_A386 Crystal Structure Of Oxidized Human Cytosolic Branc 1e-24
2hhf_B365 X-ray Crystal Structure Of Oxidized Human Mitochond 2e-23
2hhf_A365 X-ray Crystal Structure Of Oxidized Human Mitochond 2e-22
1a3g_A308 Branched-chain Amino Acid Aminotransferase From Esc 8e-14
1i1k_A309 Crystal Structure Of Eschelichia Coli Branched-chai 8e-14
1wrv_A308 Crystal Structure Of T.Th.Hb8 Branched-Chain Amino 5e-12
3u0g_A328 Crystal Structure Of Branched-Chain Amino Acid Amin 7e-08
3lul_A272 Crystal Structure Of Putative 4-Amino-4-Deoxychoris 4e-07
3csw_A285 Crystal Structure Of A Putative Branched-Chain Amin 5e-05
>pdb|3JZ6|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Branched Chain Aminotransferase In Complex With Pyridoxal-5'-Phosphate At 1.9 Angstrom. Length = 373 Back     alignment and structure 
Iteration: 1

 Score =  154 bits (388), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 126/226 (55%), Gaps = 11/226 (4%)
Query: 2   RMQVGAERMCMPSPSVEQFVEAVKATVLANKRWIPPSG-KGSLYIRPLLMGSGAVLGLAP 60
           R+Q  A R+ +P    E F+E+++  +  +++W+PP+G + SLY+RP ++ +   LG+ P
Sbjct: 106 RLQSSARRLAIPELPEEVFIESLRQLIAVDEKWVPPAGGEESLYLRPFVIATEPGLGVRP 165
Query: 61  APEYTFLIYVSPVGNYFKEGIAPINLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXX 120
           + EY +L+  SP G YFK GI P+++ + HE  RA+PGGTG  K  GNY           
Sbjct: 166 SNEYRYLLIASPAGAYFKGGIKPVSVWLSHEYVRASPGGTGAAKFGGNYAASLLAQAQAA 225
Query: 121 XXGYSDVLYLDCVHKRYLEEVSSCNIFVVKGN----VISTPAIKGTILPGITRKSIIDVA 176
             G   V++LD + +RY+EE+   N+F V G+     + TP + G++LPGITR S++ +A
Sbjct: 226 EMGCDQVVWLDAIERRYVEEMGGMNLFFVFGSGGSARLVTPELSGSLLPGITRDSLLQLA 285
Query: 177 QSQGFQXXXXX------XXXXXXXDADEVFCTGTAVVVSPVGSITY 216
              GF                   +  EVF  GTA V++PV  + +
Sbjct: 286 TDAGFAVEERKIDVDEWQKKAGAGEITEVFACGTAAVITPVSHVKH 331
>pdb|4DQN|A Chain A, Crystal Structure Of The Branched-Chain Aminotransferase From Streptococcus Mutans Length = 345 Back     alignment and structure
>pdb|3DTF|A Chain A, Structural Analysis Of Mycobacterial Branched Chain Aminotransferase- Implications For Inhibitor Design Length = 372 Back     alignment and structure
>pdb|3HT5|A Chain A, Crystal Structure Of Ilve A Branched Chain Amino Acid Transaminase From Mycobacterium Tuberculosis Length = 368 Back     alignment and structure
>pdb|3UYY|A Chain A, Crystal Structures Of Branched-Chain Aminotransferase From Deinococcus Radiodurans Complexes With Alpha-Ketoisocaproate And L-Glutamate Suggest Its Radio-Resistance For Catalysis Length = 358 Back     alignment and structure
>pdb|2HDK|A Chain A, Crystal Structure Of Cys315ala-Cys318ala Mutant Of Human Mitochondrial Branched Chain Aminotransferase Length = 365 Back     alignment and structure
>pdb|2HGW|A Chain A, Crystal Structure Of Cys318ala Mutant Of Human Mitochondrial Branched Chain Aminotransferase Length = 365 Back     alignment and structure
>pdb|2ABJ|A Chain A, Crystal Structure Of Human Branched Chain Amino Acid Transaminase In A Complex With An Inhibitor, C16h10n2o4f3scl, And Pyridoxal 5' Phosphate. Length = 366 Back     alignment and structure
>pdb|2HG8|A Chain A, Crystal Structure Of Cys315ala Mutant Of Human Mitochondrial Branched Chain Aminotransferase Complexed With Its Substrate Mimic, N-Methyl Leucine. Length = 365 Back     alignment and structure
>pdb|1EKF|A Chain A, Crystallographic Structure Of Human Branched Chain Amino Acid Aminotransferase (Mitochondrial) Complexed With Pyridoxal-5'- Phosphate At 1.95 Angstroms (Orthorhombic Form) Length = 365 Back     alignment and structure
>pdb|2COG|A Chain A, Crystal Structure Of Oxidized Human Cytosolic Branched-Chain Aminotransferase Complexed With 4-Methylvalerate Length = 386 Back     alignment and structure
>pdb|2HHF|B Chain B, X-ray Crystal Structure Of Oxidized Human Mitochondrial Branched Chain Aminotransferase (hbcatm) Length = 365 Back     alignment and structure
>pdb|2HHF|A Chain A, X-ray Crystal Structure Of Oxidized Human Mitochondrial Branched Chain Aminotransferase (hbcatm) Length = 365 Back     alignment and structure
>pdb|1A3G|A Chain A, Branched-chain Amino Acid Aminotransferase From Escherichia Coli Length = 308 Back     alignment and structure
>pdb|1I1K|A Chain A, Crystal Structure Of Eschelichia Coli Branched-chain Amino Acid Aminotransferase. Length = 309 Back     alignment and structure
>pdb|1WRV|A Chain A, Crystal Structure Of T.Th.Hb8 Branched-Chain Amino Acid Aminotransferase Length = 308 Back     alignment and structure
>pdb|3U0G|A Chain A, Crystal Structure Of Branched-Chain Amino Acid Aminotransferase From Burkholderia Pseudomallei Length = 328 Back     alignment and structure
>pdb|3LUL|A Chain A, Crystal Structure Of Putative 4-Amino-4-Deoxychorismate Lyase. (Yp_094631.1) From Legionella Pneumophila Subsp. Pneumophila Str. Philadelphia 1 At 1.78 A Resolution Length = 272 Back     alignment and structure
>pdb|3CSW|A Chain A, Crystal Structure Of A Putative Branched-Chain Amino Acid Aminotransferase (Tm0831) From Thermotoga Maritima At 2.15 A Resolution Length = 285 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query220
3dth_A372 Branched-chain amino acid aminotransferase; open t 1e-118
2a1h_A365 Branched chain aminotransferase; fold type IV; HET 1e-111
2coi_A386 Branched chain aminotransferase 1, cytosolic; PLP- 1e-110
3sno_A315 Hypothetical aminotransferase; D-aminoacid aminotr 3e-45
1iye_A309 Branched-chain amino acid aminotransferase; hexame 4e-43
3lul_A272 4-amino-4-deoxychorismate lyase; structural genomi 2e-42
2eiy_A308 ILVE, branched-chain amino acid aminotransferase; 2e-41
3u0g_A328 Putative branched-chain amino acid aminotransfera; 4e-40
1i2k_A269 4-amino-4-deoxychorismate lyase; pyridoxal phospha 2e-39
3csw_A285 BCAT, putative branched-chain-amino-acid aminotran 1e-38
2xpf_A292 4-amino-4-deoxychorismate lyase; para-aminobenzoic 4e-38
2zgi_A246 Putative 4-amino-4-deoxychorismate lyase; TTHA0621 1e-34
3daa_A277 D-amino acid aminotransferase; pyridoxal phosphate 3e-34
3qqm_A221 MLR3007 protein; structural genomics, joint center 2e-24
3ceb_A194 D-aminoacid aminotransferase-like PLP-dependent E; 3e-14
>2a1h_A Branched chain aminotransferase; fold type IV; HET: PLP GBN; 1.80A {Homo sapiens} SCOP: e.17.1.1 PDB: 1ekp_A* 1ekv_A* 1ekf_A* 1kta_A* 1kt8_A* 2hhf_B* 2hhf_A* 2hgw_A* 2hg8_A* 2hgx_A* 2hdk_A* Length = 365 Back     alignment and structure
>2coi_A Branched chain aminotransferase 1, cytosolic; PLP-dependent enzyme; HET: PLP GBN; 1.90A {Homo sapiens} PDB: 2cog_A* 2coj_A* 2abj_A* Length = 386 Back     alignment and structure
>3sno_A Hypothetical aminotransferase; D-aminoacid aminotransferase-like PLP-dependent enzymes, STR genomics; HET: MSE; 1.60A {Corynebacterium glutamicum} Length = 315 Back     alignment and structure
>1iye_A Branched-chain amino acid aminotransferase; hexamer, PLP; HET: PGU; 1.82A {Escherichia coli} SCOP: e.17.1.1 PDB: 1i1l_A* 1i1m_A* 1iyd_A* 1i1k_A* 1a3g_A* Length = 309 Back     alignment and structure
>3lul_A 4-amino-4-deoxychorismate lyase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, pyridoxal phosphate; HET: MSE LLP; 1.78A {Legionella pneumophila} Length = 272 Back     alignment and structure
>2eiy_A ILVE, branched-chain amino acid aminotransferase; PLP-dependent enzyme; HET: PLP; 1.35A {Thermus thermophilus} PDB: 1wrv_A* 2ej0_A* 2ej2_A* 2ej3_A* Length = 308 Back     alignment and structure
>3u0g_A Putative branched-chain amino acid aminotransfera; structural genomics, seattle structural genomics center for infectious disease; 1.90A {Burkholderia pseudomallei} Length = 328 Back     alignment and structure
>1i2k_A 4-amino-4-deoxychorismate lyase; pyridoxal phosphate, PABC; HET: PLP; 1.79A {Escherichia coli} SCOP: e.17.1.1 PDB: 1et0_A* 1i2l_A* Length = 269 Back     alignment and structure
>3csw_A BCAT, putative branched-chain-amino-acid aminotransfera; TM0831, putative branched-chain amino acid aminotransferase; HET: PLP CIT; 2.15A {Thermotoga maritima MSB8} Length = 285 Back     alignment and structure
>2zgi_A Putative 4-amino-4-deoxychorismate lyase; TTHA0621, PLP cofactor, pyridoxal enzyme, structural NPPSFA; HET: PLP PGE; 1.93A {Thermus thermophilus} Length = 246 Back     alignment and structure
>3daa_A D-amino acid aminotransferase; pyridoxal phosphate, transaminase; HET: PDD; 1.90A {Bacillus SP} SCOP: e.17.1.1 PDB: 4daa_A* 3lqs_A* 1daa_A* 2daa_A* 5daa_A* 1g2w_A* 1a0g_A* 2dab_A* Length = 277 Back     alignment and structure
>3qqm_A MLR3007 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, transferase; HET: LLP; 2.30A {Mesorhizobium loti} Length = 221 Back     alignment and structure
>3ceb_A D-aminoacid aminotransferase-like PLP-dependent E; joint center for structural genomics, protein structure initiative, PSI-2, lyase; HET: LLP; 2.40A {Haemophilus somnus} Length = 194 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query220
4dqn_A345 Putative branched-chain amino acid aminotransfera; 100.0
3dth_A372 Branched-chain amino acid aminotransferase; open t 100.0
3uzo_A358 Branched-chain-amino-acid aminotransferase; BCAT, 100.0
2a1h_A365 Branched chain aminotransferase; fold type IV; HET 100.0
2coi_A386 Branched chain aminotransferase 1, cytosolic; PLP- 100.0
3u0g_A328 Putative branched-chain amino acid aminotransfera; 100.0
3lul_A272 4-amino-4-deoxychorismate lyase; structural genomi 100.0
1i2k_A269 4-amino-4-deoxychorismate lyase; pyridoxal phospha 100.0
1iye_A309 Branched-chain amino acid aminotransferase; hexame 100.0
2eiy_A308 ILVE, branched-chain amino acid aminotransferase; 100.0
3dtg_A372 Branched-chain amino acid aminotransferase; open t 100.0
2xpf_A292 4-amino-4-deoxychorismate lyase; para-aminobenzoic 100.0
3daa_A277 D-amino acid aminotransferase; pyridoxal phosphate 100.0
3sno_A315 Hypothetical aminotransferase; D-aminoacid aminotr 100.0
3csw_A285 BCAT, putative branched-chain-amino-acid aminotran 100.0
2zgi_A246 Putative 4-amino-4-deoxychorismate lyase; TTHA0621 100.0
3qqm_A221 MLR3007 protein; structural genomics, joint center 100.0
3ceb_A194 D-aminoacid aminotransferase-like PLP-dependent E; 100.0
>4dqn_A Putative branched-chain amino acid aminotransfera; aminotransferase, transferase; 1.97A {Streptococcus mutans} Back     alignment and structure
Probab=100.00  E-value=1.4e-49  Score=341.76  Aligned_cols=217  Identities=42%  Similarity=0.709  Sum_probs=194.7

Q ss_pred             ChHHhHHhhcCCCCCCHHHHHHHHHHHHHHccCcCCCCC-CccEEEEEEEEecCCccCCCCCCCeeEEEEEecCcccccC
Q 027646            1 MRMQVGAERMCMPSPSVEQFVEAVKATVLANKRWIPPSG-KGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKE   79 (220)
Q Consensus         1 ~RL~~sa~~l~i~~~~~~~l~~~i~~~~~~~~~~~~~~~-~~~~~ir~~~~g~~~~~g~~~~~~~~~~i~~~p~~~~~~~   79 (220)
                      +||.+||+.|+||.++.++|.+.+.+++++|+.|+|+.. .+.+|||++++|+++.+|+.|+..++++|++.|+++++..
T Consensus        84 ~RL~~Sa~~L~i~~~~~~~l~~~i~~lv~~n~~~vp~~~~~~~~yiR~~v~~~~~~~g~~p~~~~~~~i~~~p~~~~~~~  163 (345)
T 4dqn_A           84 ERLQRTADRLLMPQVPTDKFIDAAKQVVRANEEYVPPYGTGATLYLRPLLIGVGDVIGVHPADEYIFTIFAMPVGNYFKG  163 (345)
T ss_dssp             HHHHHHHHHTTCCCCCHHHHHHHHHHHHHHTGGGSCCTTSSCEEEEEEEEEEESCCCSSCCCSEEEEEEEEEEECCSCTT
T ss_pred             HHHHHHHHHhCCCCCCHHHHHHHHHHHHHhccccCCCCCCCCcEEEEEEEEeCCCccCCCCCCCeEEEEEEEECcccccc
Confidence            599999999999955999999999999999988777532 3589999998887777888776678899999998877765


Q ss_pred             CccceEEEeecceeecCCCCCCCcccccchHHHHHHHHHHHHCCCCeEEEeecCCCceEEEcCceEEEEE-ECCEEEcCC
Q 027646           80 GIAPINLVVEHELHRATPGGTGGVKTIGNYAAVLKAQSAAKAKGYSDVLYLDCVHKRYLEEVSSCNIFVV-KGNVISTPA  158 (220)
Q Consensus        80 g~~~~~l~~~~~~~r~~~~~l~~~Kt~~~~~~~~~a~~~a~~~g~de~l~ld~~~~g~v~E~~~sNif~~-~~~~l~TP~  158 (220)
                      +.+++++.+++++.|..|++++++||..||+++++++++|+++|+||+||+|..++|+|+|++++|||++ +||+|+|||
T Consensus       164 ~~~gv~l~~~~~~~R~~~~~~~~~Kt~~nyl~~vla~~eA~~~G~de~l~ld~~~~g~v~E~~~sNif~v~~~g~l~TP~  243 (345)
T 4dqn_A          164 GLAPTNFLIQDDYDRAAPHGTGAAKVGGNYAASLLPGKVAHERQFSDVIYLDPATHTKIEEVGSANFFGITKDNEFITPL  243 (345)
T ss_dssp             SCCCEEEEECTTCCSSCTTSSTTSCCHHHHHHHHHHHHHHHHTTCSCEEEECTTTSCBEEEETTEEEEEEETTCEEEECC
T ss_pred             CCCCEEEEEccceEecCCCccccccccccCHHHHHHHHHHHHCCCCEEEEEcCCCCCeEEEcCCceEEEEecCCEEEeCC
Confidence            6677888887657899998899999945999999999999999999999999622499999999999998 899999999


Q ss_pred             CCCCCCCchHHHHHHHHHHh-CCCeEEEEecCHHHHhccceeeeecCcceeEEeEEEeeCC
Q 027646          159 IKGTILPGITRKSIIDVAQS-QGFQVEERLVTVEELLDADEVFCTGTAVVVSPVGSITYLG  218 (220)
Q Consensus       159 l~~~~L~GitR~~ll~~a~~-~g~~v~e~~i~~~eL~~ade~f~tns~~gi~pV~~i~~~~  218 (220)
                       +.++|+||||+.||++|++ +|++|+|+.++++||..|||+|+|||++||+||.+|++++
T Consensus       244 -~~~iL~GitR~~vl~la~~~~g~~v~e~~i~~~el~~adevf~t~t~~~i~PV~~Id~~~  303 (345)
T 4dqn_A          244 -SPSILPSVTKYSLLYLAEHRFGMKAIEGDVCVDELDKFVEAGACGTAAVISPIGGVQHGD  303 (345)
T ss_dssp             -CTTSCCCHHHHHHHHHHHHTTCCEEEECCCBTTCGGGEEEEEEEETTTEEEEEEEEEETT
T ss_pred             -CCCccHHHHHHHHHHHHHhccCCeEEEEeCCHHHHHhhhHHhhhcchhHEEEEEEECccc
Confidence             8999999999999999999 9999999999999999999999999999999999999974
>3uzo_A Branched-chain-amino-acid aminotransferase; BCAT, amino-acid biosynthesis, branched-CH acid biosynthesis, pyridoxal phosphate, L-GLUT; HET: PLP GLU; 2.00A {Deinococcus radiodurans} PDB: 3uzb_A* 3uyy_A* Back     alignment and structure
>2a1h_A Branched chain aminotransferase; fold type IV; HET: PLP GBN; 1.80A {Homo sapiens} SCOP: e.17.1.1 PDB: 1ekp_A* 1ekv_A* 1ekf_A* 1kta_A* 1kt8_A* 2hhf_B* 2hhf_A* 2hgw_A* 2hg8_A* 2hgx_A* 2hdk_A* Back     alignment and structure
>2coi_A Branched chain aminotransferase 1, cytosolic; PLP-dependent enzyme; HET: PLP GBN; 1.90A {Homo sapiens} PDB: 2cog_A* 2coj_A* 2abj_A* Back     alignment and structure
>3u0g_A Putative branched-chain amino acid aminotransfera; structural genomics, seattle structural genomics center for infectious disease; 1.90A {Burkholderia pseudomallei} Back     alignment and structure
>3lul_A 4-amino-4-deoxychorismate lyase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, pyridoxal phosphate; HET: MSE LLP; 1.78A {Legionella pneumophila} Back     alignment and structure
>1i2k_A 4-amino-4-deoxychorismate lyase; pyridoxal phosphate, PABC; HET: PLP; 1.79A {Escherichia coli} SCOP: e.17.1.1 PDB: 1et0_A* 1i2l_A* Back     alignment and structure
>1iye_A Branched-chain amino acid aminotransferase; hexamer, PLP; HET: PGU; 1.82A {Escherichia coli} SCOP: e.17.1.1 PDB: 1i1l_A* 1i1m_A* 1iyd_A* 1i1k_A* 1a3g_A* Back     alignment and structure
>2eiy_A ILVE, branched-chain amino acid aminotransferase; PLP-dependent enzyme; HET: PLP; 1.35A {Thermus thermophilus} PDB: 1wrv_A* 2ej0_A* 2ej2_A* 2ej3_A* Back     alignment and structure
>3dtg_A Branched-chain amino acid aminotransferase; open twisted alpha/beta; HET: PLP; 1.90A {Mycobacterium smegmatis} PDB: 3dtf_A* 3jz6_A* 3ht5_A* Back     alignment and structure
>3daa_A D-amino acid aminotransferase; pyridoxal phosphate, transaminase; HET: PDD; 1.90A {Bacillus SP} SCOP: e.17.1.1 PDB: 4daa_A* 3lqs_A* 1daa_A* 2daa_A* 5daa_A* 1g2w_A* 1a0g_A* 2dab_A* Back     alignment and structure
>3sno_A Hypothetical aminotransferase; D-aminoacid aminotransferase-like PLP-dependent enzymes, STR genomics; HET: MSE; 1.60A {Corynebacterium glutamicum} Back     alignment and structure
>3csw_A BCAT, putative branched-chain-amino-acid aminotransfera; TM0831, putative branched-chain amino acid aminotransferase; HET: PLP CIT; 2.15A {Thermotoga maritima MSB8} Back     alignment and structure
>2zgi_A Putative 4-amino-4-deoxychorismate lyase; TTHA0621, PLP cofactor, pyridoxal enzyme, structural NPPSFA; HET: PLP PGE; 1.93A {Thermus thermophilus} Back     alignment and structure
>3qqm_A MLR3007 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, transferase; HET: LLP; 2.30A {Mesorhizobium loti} Back     alignment and structure
>3ceb_A D-aminoacid aminotransferase-like PLP-dependent E; joint center for structural genomics, protein structure initiative, PSI-2, lyase; HET: LLP; 2.40A {Haemophilus somnus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 220
d2a1ha1363 e.17.1.1 (A:3-365) Branched-chain aminoacid aminot 4e-35
d1iyea_304 e.17.1.1 (A:) Branched-chain aminoacid aminotransf 4e-30
d1daaa_277 e.17.1.1 (A:) D-aminoacid aminotransferase {Bacill 9e-20
d1i2ka_269 e.17.1.1 (A:) Aminodeoxychorismate lyase {Escheric 8e-18
>d2a1ha1 e.17.1.1 (A:3-365) Branched-chain aminoacid aminotransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 363 Back     information, alignment and structure

class: Multi-domain proteins (alpha and beta)
fold: D-aminoacid aminotransferase-like PLP-dependent enzymes
superfamily: D-aminoacid aminotransferase-like PLP-dependent enzymes
family: D-aminoacid aminotransferase-like PLP-dependent enzymes
domain: Branched-chain aminoacid aminotransferase
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

 Score =  125 bits (314), Expect = 4e-35
 Identities = 75/231 (32%), Positives = 118/231 (51%), Gaps = 12/231 (5%)

Query: 1   MRMQVGAERMCMPSPSVEQFVEAVKATVLANKRWIPPSGKGSLYIRPLLMGSGAVLGLAP 60
            RM   A R+C+PS    + +E ++  +  +K W+P +   SLY+RP+L+G+   LG++ 
Sbjct: 96  DRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSLGVSQ 155

Query: 61  APEYTFLIYVSPVGNYFK-EGIAPINLVVEHELHRATPGGTGGVKTIGNYAAVLKAQSAA 119
                  + + PVG YF    + P++L+ +    RA  GG G  K  GNY   +  Q  A
Sbjct: 156 PRRALLFVILCPVGAYFPGGSVTPVSLLADPAFIRAWVGGVGNYKLGGNYGPTVLVQQEA 215

Query: 120 KAKGYSDVLYLDCVHKRYLEEVSSCNIFVVKGN----VISTPAIKGTILPGITRKSIIDV 175
             +G   VL+L     +  E  +               + TP + G ILPG+ R+S++D+
Sbjct: 216 LKRGCEQVLWLYGPDHQLTEVGTMNIFVYWTHEDGVLELVTPPLNGVILPGVVRQSLLDM 275

Query: 176 AQSQG-FQVEERLVTVEELLDA------DEVFCTGTAVVVSPVGSITYLGK 219
           AQ+ G F+V ER +T+++LL A       EVF +GTA  V PV  I Y  +
Sbjct: 276 AQTWGEFRVVERTITMKQLLRALEEGRVREVFGSGTACQVCPVHRILYKDR 326
>d1iyea_ e.17.1.1 (A:) Branched-chain aminoacid aminotransferase {Escherichia coli [TaxId: 562]} Length = 304 Back     information, alignment and structure
>d1daaa_ e.17.1.1 (A:) D-aminoacid aminotransferase {Bacillus sp., strain YM-1 [TaxId: 1409]} Length = 277 Back     information, alignment and structure
>d1i2ka_ e.17.1.1 (A:) Aminodeoxychorismate lyase {Escherichia coli [TaxId: 562]} Length = 269 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query220
d2a1ha1363 Branched-chain aminoacid aminotransferase {Human ( 100.0
d1iyea_304 Branched-chain aminoacid aminotransferase {Escheri 100.0
d1i2ka_269 Aminodeoxychorismate lyase {Escherichia coli [TaxI 100.0
d1daaa_277 D-aminoacid aminotransferase {Bacillus sp., strain 100.0
>d2a1ha1 e.17.1.1 (A:3-365) Branched-chain aminoacid aminotransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Back     information, alignment and structure
class: Multi-domain proteins (alpha and beta)
fold: D-aminoacid aminotransferase-like PLP-dependent enzymes
superfamily: D-aminoacid aminotransferase-like PLP-dependent enzymes
family: D-aminoacid aminotransferase-like PLP-dependent enzymes
domain: Branched-chain aminoacid aminotransferase
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=100.00  E-value=2e-43  Score=304.13  Aligned_cols=218  Identities=37%  Similarity=0.658  Sum_probs=185.9

Q ss_pred             ChHHhHHhhcCCCCCCHHHHHHHHHHHHHHccCcCCCCCCccEEEEEEEEecCCccCCCCCCCeeEEEEEecCcccccC-
Q 027646            1 MRMQVGAERMCMPSPSVEQFVEAVKATVLANKRWIPPSGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKE-   79 (220)
Q Consensus         1 ~RL~~sa~~l~i~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~ir~~~~g~~~~~g~~~~~~~~~~i~~~p~~~~~~~-   79 (220)
                      +||.+||+.++++.++.+++.+.+.++++.|..++|......+|+|++++++++..++.++.....++++.+...++.. 
T Consensus        96 ~RL~~Sa~~l~~~~~~~~~~~~~i~~~v~~n~~~v~~~~~~~~yiR~~v~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~  175 (363)
T d2a1ha1          96 DRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSLGVSQPRRALLFVILCPVGAYFPGG  175 (363)
T ss_dssp             HHHHHHHHHTTCCCCCHHHHHHHHHHHHHHTGGGSCCSTTCEEEEEEEEEECCBCCSCSCCSEEEEEEEEEEECCSSSSS
T ss_pred             HHHHHHHHHhCCCCCChHHHHHHHHHHHHHHHhhccccccccEEEEEeeccCCccccccCCcccceeEEEeeccccCccc
Confidence            4999999999999778999999999999999887777667789999998877766777766655556666665544432 


Q ss_pred             CccceEEEeecceeecCCCCCCCcccccchHHHHHHHHHHHHCCCCeEEEeecCCCceEEEcCceEEEEEECC-----EE
Q 027646           80 GIAPINLVVEHELHRATPGGTGGVKTIGNYAAVLKAQSAAKAKGYSDVLYLDCVHKRYLEEVSSCNIFVVKGN-----VI  154 (220)
Q Consensus        80 g~~~~~l~~~~~~~r~~~~~l~~~Kt~~~~~~~~~a~~~a~~~g~de~l~ld~~~~g~v~E~~~sNif~~~~~-----~l  154 (220)
                      ...+..+.+.+.+.|..+......|.+.||+++++++++|+++|+||+||||. .+|+|+|++++|+|+++++     ++
T Consensus       176 ~~~~~~~~~~~~~~r~~~~~~~~~k~~~ny~~~~la~~eA~~~G~de~l~L~~-~dg~v~E~~~sNiF~v~~~kdG~~~l  254 (363)
T d2a1ha1         176 SVTPVSLLADPAFIRAWVGGVGNYKLGGNYGPTVLVQQEALKRGCEQVLWLYG-PDHQLTEVGTMNIFVYWTHEDGVLEL  254 (363)
T ss_dssp             SCCCEEEEECTTCCSCCTTSSTTSCBGGGTTTHHHHHHHHHHTTCSEEEEEET-TTTEEEEETTEEEEEEEECTTSCEEE
T ss_pred             cccceeEEEeeeccccCccccccccccccccchhhHHHHhhcCCceeeeeccc-ccceEEeccceEEEEEEecCCCcEEE
Confidence            23445555655667777777778888889999999999999999999999974 2899999999999999766     69


Q ss_pred             EcCCCCCCCCCchHHHHHHHHHHhCC-CeEEEEecCHHHHhcc------ceeeeecCcceeEEeEEEeeCCC
Q 027646          155 STPAIKGTILPGITRKSIIDVAQSQG-FQVEERLVTVEELLDA------DEVFCTGTAVVVSPVGSITYLGK  219 (220)
Q Consensus       155 ~TP~l~~~~L~GitR~~ll~~a~~~g-~~v~e~~i~~~eL~~a------de~f~tns~~gi~pV~~i~~~~~  219 (220)
                      +|||++.+|||||||+.||++|+++| ++|+|+.++++||.+|      ||+|+|||..+|+||.+|+++|+
T Consensus       255 ~tppl~~~ILpGITR~~Viela~~~g~i~V~Er~i~~~eL~~A~~~~~~dEvF~tgTa~~I~PV~~I~~~~~  326 (363)
T d2a1ha1         255 VTPPLNGVILPGVVRQSLLDMAQTWGEFRVVERTITMKQLLRALEEGRVREVFGSGTACQVCPVHRILYKDR  326 (363)
T ss_dssp             EECCCSSSSCCCHHHHHHHHHHHHHTSSEEEECCCBHHHHHHHHHTTCEEEEEEEETTTEEEEEEEEEETTE
T ss_pred             EeccccccccCchHHHHHHHHHHHcCCCceeecCCCHHHHHhHhhcCCccEEEEcCCCcEEEEEEEEEeCCc
Confidence            99999999999999999999999997 9999999999999999      99999999999999999988753
>d1iyea_ e.17.1.1 (A:) Branched-chain aminoacid aminotransferase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1i2ka_ e.17.1.1 (A:) Aminodeoxychorismate lyase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1daaa_ e.17.1.1 (A:) D-aminoacid aminotransferase {Bacillus sp., strain YM-1 [TaxId: 1409]} Back     information, alignment and structure