Citrus Sinensis ID: 027977

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210------
Protein Sequence
MASATATALCPNHVRNSPSLLIPAVSSNPLTVSQNSKCSFSLPAKTGSRRAHNLKLKHPPTPCASAEGLPGELTEDSKFVPLNADDPTFGPPALLLLGFKVEEAVKIRQFLKELDGEFLEVIFCTEDMIPRSLWEAMNTKQTNLEAVKVAESLPRICFLSGLSGEEMMMFIEAFPETGLEPAVFAALVPNSADKPLQELIEEVMGDHEMLTGQQSS
Secondary Structure (PSIPRED)
ccccccccccccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEccccHHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHccccccHHHcccccccccEEEEccccHHHHHHHHHHcccccccccEEEEEccccccccHHHHHHHHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHcccccccccHHHHHHHHcccccEEcccccEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccHHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHHHHcccccccccccccccccEEEEEEcccHHHHHHHHHHHHHcccccEEEEEEcccccccHHHHHHHHHHHHHHHHcccccc
Coil and Loop (DISEMBL)
masatatalcpnhvrnspsllipavssnpltvsqnskcsfslpaktgsrrahnlklkhpptpcasaeglpgeltedskfvplnaddptfgppallLLGFKVEEAVKIRQFLKELDGEFLEVIFCTEDMIPRSLWEAMNTKQTNLEAVKVAESlpricflsglsGEEMMMFIEafpetglepavfaalvpnsadkPLQELIEEVmgdhemltgqqss
Flexible Loop (DISEMBL)
masatatalcpnhvrnspSLLIPAVSSNPLTVSQNSKCSFSLPAKTGSRRAHNLKLKHPPTPCASAEGLPGELTEDSKFVPLNADDPTFGPPALLLLGFKVEEAVKIRQFLKELDGEFLEVIFCTEDMIPRSLWEAMNTKQTNLEAVKVAESLPRICFLSGLSGEEMMMFIEAFPETGLEPAVFAALVPNSADKPLQELIEEVMGDHEMLTGQQSS
Low Complexity Region (SEG)
MASATATALCPNHVRNSPSLLIPAVSSNPLTVSQNSKCSFSLPAKTGSRRAHNLKLKHPPTPCASAEGLPGELTEDSKFVPLNADDPTFGPPALLLLGFKVEEAVKIRQFLKELDGEFLEVIFCTEDMIPRSLWEAMNTKQTNLEAVKVAESLPRICFLSGLSGEEMMMFIEAFPETGLEPAVFAALVPNSADKPLQELIEEVMGDHEMLTGQQSS
Disordered region (IsUnstruct)
**************************************************************************************PTFGPPALLLLGFKVEEAVKIRQFLKELDGEFLEVIFCTEDMIPRSLWEAMNTKQTNLEAVKVAESLPRICFLSGLSGEEMMMFIEAFPETGLEPAVFAALVP***************************
Disordered Region (DISOPRED)
****TAT*LCPNHVRNSPSLLIPAVS*********************************************************ADDPTFGPPALLLLGFKVEEAVKIRQFLKELDGEFLEVIFCTEDMIPRSLWEAMN**************LPRICFLSGLSGEEMMMFIEAFPETGLEPAVFAALVPNSADKPLQELIEEVMGD***L******
Disordered Region (DISEMBL)
MASATATALCPNHVRNSPSLLIPAVSSNPLTVSQNSKCSFSLPAKTGSRRAHNLKLKHPPTPCASAEGLPGELTEDSKFVPLNADDPTFGPPALLLLGFKVEEAVKIRQFLKELDGEFLEVIFCTEDMIPRSLWEAMNTKQTNLEAVKVAESLPRICFLSGLSGEEMMMFIEAFPETGLEPAVFAALVPNSADKPLQELIEEVMGDHE********
Disordered Region (DISPRO)
****TATALCPNHVRNSPSLLIPAVSSNPLTVSQNSKCSFSLPAKT***********************P******SKFVPLNADDPTFGPPALLLLGFKVEEAVKIRQFLKELDGEFLEVIFCTEDMIPRSLWEAMNTKQTNLEAVKVAESLPRICFLSGLSGEEMMMFIEAFPETGLEPAVFAALVPNSADKPLQELIEEVMGDHEML******
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASATATALCPNHVRNSPSLLIPAVSSNPLTVSQNSKCSFSLPAKTGSRRAHNLKLKHPPTPCASAEGLPGELTEDSKFVPLNADDPTFGPPALLLLGFKVEEAVKIRQFLKELDGEFLEVIFCTEDMIPRSLWEAMNTKQTNLEAVKVAESLPRICFLSGLSGEEMMMFIEAFPETGLEPAVFAALVPNSADKPLQELIEEVMGDHEMLTGQQSS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	216
224097770	219	predicted protein [Populus trichocarpa]	0.958	0.945	0.711	6e-78
255577430	208	conserved hypothetical protein [Ricinus	0.949	0.985	0.706	2e-75
225448960	206	PREDICTED: uncharacterized protein LOC10	0.763	0.800	0.808	1e-74
296085976	204	unnamed protein product [Vitis vinifera]	0.763	0.808	0.808	2e-74
363807018	201	uncharacterized protein LOC100806254 [Gl	0.699	0.751	0.788	5e-65
356576255	203	PREDICTED: uncharacterized protein LOC10	0.699	0.743	0.788	4e-64
449449340	210	PREDICTED: uncharacterized protein LOC10	0.787	0.809	0.7	8e-63
449487250	210	PREDICTED: uncharacterized protein LOC10	0.787	0.809	0.7	9e-63
297833820	212	hypothetical protein ARALYDRAFT_478371 [	0.754	0.768	0.716	9e-58
23306352	200	Unknown protein [Arabidopsis thaliana]	0.787	0.85	0.678	2e-56

>gi|224097770|ref|XP_002311072.1| predicted protein [Populus trichocarpa] gi|222850892|gb|EEE88439.1| predicted protein [Populus trichocarpa]

 Score =  295 bits (756), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 153/215 (71%), Positives = 173/215 (80%), Gaps = 8/215 (3%)

Query: 1   MASATATALCPNHVRNSPSLLIPAVSSNPLTVSQNSKCSFSLPAKTGSRRAHNLKLKHPP 60
           MA+A A ++  N   NS +LL P+VSSNP  +S+ S  S       G    H++KLKHP 
Sbjct: 1   MAAALAFSIT-NRFLNSRALLFPSVSSNPFVISKISTVSHLSTKDAG----HHMKLKHPS 55

Query: 61  TPCASAEGLPGELT-EDSKFVPLNADDPTFGPPALLLLGFKVEEAVKIRQFLKELDGEFL 119
              ASAEG+P EL  EDSKFVPLNA+D  +GPPALLLLGF+V EAVKIR+ LKELDGEFL
Sbjct: 56  R--ASAEGIPSELMDEDSKFVPLNAEDSAYGPPALLLLGFEVGEAVKIRELLKELDGEFL 113

Query: 120 EVIFCTEDMIPRSLWEAMNTKQTNLEAVKVAESLPRICFLSGLSGEEMMMFIEAFPETGL 179
           +VIFCTEDMIPRSLWEAMNT QTNLE VK+A+SLPRICFLSGLSGEEMMMFI+AFPE GL
Sbjct: 114 KVIFCTEDMIPRSLWEAMNTSQTNLETVKIAKSLPRICFLSGLSGEEMMMFIDAFPEKGL 173

Query: 180 EPAVFAALVPNSADKPLQELIEEVMGDHEMLTGQQ 214
           EPAVFAALVPNSADKPL+ELIEE+MGDHEML   Q
Sbjct: 174 EPAVFAALVPNSADKPLEELIEEIMGDHEMLAANQ 208

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255577430|ref|XP_002529594.1| conserved hypothetical protein [Ricinus communis] gi|223530927|gb|EEF32786.1| conserved hypothetical protein [Ricinus communis]

 Score =  287 bits (735), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 149/211 (70%), Positives = 169/211 (80%), Gaps = 6/211 (2%)

Query: 4   ATATALCPNHVRNSPSLLIPAVSSNPLTVSQNSKCSFSLPAKTGSRRAHNLKLKHPPTPC 63
           A A  +  NH   S    +P VSSNP  VS  S    S P+ T    AH +KL HP    
Sbjct: 2   AFAIGISTNHSLKS---WVPFVSSNPFVVSHISAIFASSPSPT-KDAAHQVKLSHPLK-- 55

Query: 64  ASAEGLPGELTEDSKFVPLNADDPTFGPPALLLLGFKVEEAVKIRQFLKELDGEFLEVIF 123
           ASAEG P ELTE+SKFVPLNAD+P FGPPALLLLGF+VEE +KI+Q L+ELDGEFL+VIF
Sbjct: 56  ASAEGNPSELTEESKFVPLNADEPVFGPPALLLLGFEVEEELKIKQLLEELDGEFLQVIF 115

Query: 124 CTEDMIPRSLWEAMNTKQTNLEAVKVAESLPRICFLSGLSGEEMMMFIEAFPETGLEPAV 183
           CTEDMIP SLWEAM+TKQ NL  V++A+SLPRICFLSGLSGEEMMMFI+AFPETGLEPAV
Sbjct: 116 CTEDMIPLSLWEAMHTKQANLGTVQIAKSLPRICFLSGLSGEEMMMFIDAFPETGLEPAV 175

Query: 184 FAALVPNSADKPLQELIEEVMGDHEMLTGQQ 214
           FAALVPNSA+KPLQELI+E+MGDHEMLTG+Q
Sbjct: 176 FAALVPNSANKPLQELIDEIMGDHEMLTGKQ 206

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225448960|ref|XP_002269222.1| PREDICTED: uncharacterized protein LOC100263280 [Vitis vinifera]

 Score =  284 bits (727), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 135/167 (80%), Positives = 155/167 (92%), Gaps = 2/167 (1%)

Query: 48  SRRAHNLKLKHPPTPCASAEGLPGELTEDSKFVPLNADDPTFGPPALLLLGFKVEEAVKI 107
           ++ AH LKL+HPP   AS+EG+P EL EDSKFVPLN+DDP +GPPALLLLGF+VEE VKI
Sbjct: 40  AKNAHPLKLQHPPR--ASSEGIPTELIEDSKFVPLNSDDPIYGPPALLLLGFEVEEEVKI 97

Query: 108 RQFLKELDGEFLEVIFCTEDMIPRSLWEAMNTKQTNLEAVKVAESLPRICFLSGLSGEEM 167
           RQ LKELDGEFL+VI+CTEDMI RSLWEAMNT+Q+NLEA+K+A++LPRICFLSGLSGEEM
Sbjct: 98  RQLLKELDGEFLQVIYCTEDMITRSLWEAMNTEQSNLEALKIAKALPRICFLSGLSGEEM 157

Query: 168 MMFIEAFPETGLEPAVFAALVPNSADKPLQELIEEVMGDHEMLTGQQ 214
           MMFI+AFPETGLE AVFAALVPNSADKPLQELIEE+MGDHEML+G+Q
Sbjct: 158 MMFIDAFPETGLEAAVFAALVPNSADKPLQELIEEIMGDHEMLSGKQ 204

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296085976|emb|CBI31417.3| unnamed protein product [Vitis vinifera]

 Score =  284 bits (727), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 135/167 (80%), Positives = 155/167 (92%), Gaps = 2/167 (1%)

Query: 48  SRRAHNLKLKHPPTPCASAEGLPGELTEDSKFVPLNADDPTFGPPALLLLGFKVEEAVKI 107
           ++ AH LKL+HPP   AS+EG+P EL EDSKFVPLN+DDP +GPPALLLLGF+VEE VKI
Sbjct: 38  AKNAHPLKLQHPPR--ASSEGIPTELIEDSKFVPLNSDDPIYGPPALLLLGFEVEEEVKI 95

Query: 108 RQFLKELDGEFLEVIFCTEDMIPRSLWEAMNTKQTNLEAVKVAESLPRICFLSGLSGEEM 167
           RQ LKELDGEFL+VI+CTEDMI RSLWEAMNT+Q+NLEA+K+A++LPRICFLSGLSGEEM
Sbjct: 96  RQLLKELDGEFLQVIYCTEDMITRSLWEAMNTEQSNLEALKIAKALPRICFLSGLSGEEM 155

Query: 168 MMFIEAFPETGLEPAVFAALVPNSADKPLQELIEEVMGDHEMLTGQQ 214
           MMFI+AFPETGLE AVFAALVPNSADKPLQELIEE+MGDHEML+G+Q
Sbjct: 156 MMFIDAFPETGLEAAVFAALVPNSADKPLQELIEEIMGDHEMLSGKQ 202

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363807018|ref|NP_001242321.1| uncharacterized protein LOC100806254 [Glycine max] gi|255640434|gb|ACU20504.1| unknown [Glycine max]

 Score =  253 bits (645), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 119/151 (78%), Positives = 139/151 (92%)

Query: 64  ASAEGLPGELTEDSKFVPLNADDPTFGPPALLLLGFKVEEAVKIRQFLKELDGEFLEVIF 123
           AS+EGLP EL EDSKFVPLN +DP +GPPALLLLGF+ +EA+KIRQ LKELDGEFL+VI+
Sbjct: 50  ASSEGLPNELVEDSKFVPLNEEDPIYGPPALLLLGFEADEALKIRQLLKELDGEFLKVIY 109

Query: 124 CTEDMIPRSLWEAMNTKQTNLEAVKVAESLPRICFLSGLSGEEMMMFIEAFPETGLEPAV 183
           CTEDMI RS WEAM+T Q N+E VK+A+SLPRICFLSGLSGEEMMMFI++FPETGL+PA 
Sbjct: 110 CTEDMIMRSFWEAMHTTQPNVEDVKIAKSLPRICFLSGLSGEEMMMFIDSFPETGLKPAA 169

Query: 184 FAALVPNSADKPLQELIEEVMGDHEMLTGQQ 214
           FAALVPNSA+KPL+ELI+E+MGDHEMLTG+Q
Sbjct: 170 FAALVPNSANKPLEELIDEIMGDHEMLTGEQ 200

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356576255|ref|XP_003556248.1| PREDICTED: uncharacterized protein LOC100779576 [Glycine max]

 Score =  249 bits (637), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 119/151 (78%), Positives = 139/151 (92%)

Query: 64  ASAEGLPGELTEDSKFVPLNADDPTFGPPALLLLGFKVEEAVKIRQFLKELDGEFLEVIF 123
           AS+EGLP EL EDSKFVPLN +DP +GPPALLLLGF+ +EA+KI+Q LKELDGEFL+VI+
Sbjct: 52  ASSEGLPNELVEDSKFVPLNEEDPIYGPPALLLLGFEADEALKIQQLLKELDGEFLKVIY 111

Query: 124 CTEDMIPRSLWEAMNTKQTNLEAVKVAESLPRICFLSGLSGEEMMMFIEAFPETGLEPAV 183
           CTEDMI RSLWEAM+T Q +LE VK+A+SLPRICFLSGLSGEEMMMFI++FPET L+PA 
Sbjct: 112 CTEDMITRSLWEAMHTTQPSLEEVKIAKSLPRICFLSGLSGEEMMMFIDSFPETELKPAA 171

Query: 184 FAALVPNSADKPLQELIEEVMGDHEMLTGQQ 214
           FAALVPNSA+KPL+ELIEE+MGDHEMLTG+Q
Sbjct: 172 FAALVPNSANKPLEELIEEIMGDHEMLTGEQ 202

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449449340|ref|XP_004142423.1| PREDICTED: uncharacterized protein LOC101205440 [Cucumis sativus]

 Score =  245 bits (626), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 119/170 (70%), Positives = 143/170 (84%)

Query: 46  TGSRRAHNLKLKHPPTPCASAEGLPGELTEDSKFVPLNADDPTFGPPALLLLGFKVEEAV 105
           + S   + LKLK   T  AS+EG   EL ED+KFVPLNADDP +GPPALLLLGF+++EAV
Sbjct: 37  SASSTCNPLKLKVRRTFKASSEGASNELMEDAKFVPLNADDPRYGPPALLLLGFELDEAV 96

Query: 106 KIRQFLKELDGEFLEVIFCTEDMIPRSLWEAMNTKQTNLEAVKVAESLPRICFLSGLSGE 165
           KI++ LK+LDGEF++VI CTEDMI RSLWEA++T Q  L  VK+A SLPRICFLSGLSG+
Sbjct: 97  KIQELLKDLDGEFMQVILCTEDMITRSLWEAVHTNQPVLAKVKIARSLPRICFLSGLSGD 156

Query: 166 EMMMFIEAFPETGLEPAVFAALVPNSADKPLQELIEEVMGDHEMLTGQQS 215
           EMMMFI+AFPETGLEPAVFAALVPN+A+KP++ELIEE+MGDHE +TG  S
Sbjct: 157 EMMMFIDAFPETGLEPAVFAALVPNAANKPVEELIEEIMGDHEAMTGATS 206

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449487250|ref|XP_004157537.1| PREDICTED: uncharacterized protein LOC101230636 [Cucumis sativus]

 Score =  245 bits (625), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 119/170 (70%), Positives = 143/170 (84%)

Query: 46  TGSRRAHNLKLKHPPTPCASAEGLPGELTEDSKFVPLNADDPTFGPPALLLLGFKVEEAV 105
           + S   + LKLK   T  AS+EG   EL ED+KFVPLNADDP +GPPALLLLGF+++EAV
Sbjct: 37  SASSTCNPLKLKLRRTFKASSEGASNELMEDAKFVPLNADDPRYGPPALLLLGFELDEAV 96

Query: 106 KIRQFLKELDGEFLEVIFCTEDMIPRSLWEAMNTKQTNLEAVKVAESLPRICFLSGLSGE 165
           KI++ LK+LDGEF++VI CTEDMI RSLWEA++T Q  L  VK+A SLPRICFLSGLSG+
Sbjct: 97  KIQELLKDLDGEFMQVILCTEDMITRSLWEAVHTNQPVLAKVKIARSLPRICFLSGLSGD 156

Query: 166 EMMMFIEAFPETGLEPAVFAALVPNSADKPLQELIEEVMGDHEMLTGQQS 215
           EMMMFI+AFPETGLEPAVFAALVPN+A+KP++ELIEE+MGDHE +TG  S
Sbjct: 157 EMMMFIDAFPETGLEPAVFAALVPNAANKPVEELIEEIMGDHEAMTGATS 206

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297833820|ref|XP_002884792.1| hypothetical protein ARALYDRAFT_478371 [Arabidopsis lyrata subsp. lyrata] gi|297330632|gb|EFH61051.1| hypothetical protein ARALYDRAFT_478371 [Arabidopsis lyrata subsp. lyrata]

 Score =  228 bits (582), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 119/166 (71%), Positives = 138/166 (83%), Gaps = 3/166 (1%)

Query: 53  NLKLKHPPTPCA--SAEGLPGELTEDSKFVPLNADDPTFGPPALLLLGFKVEEAVKIRQF 110
           N KLK    PC   SA+ +P  L EDSKFVPL+  DP FGPP LLLLG ++ EA KI++ 
Sbjct: 48  NTKLKQQ-KPCVRNSAQEIPQTLEEDSKFVPLDPQDPRFGPPVLLLLGLQLHEAQKIQEL 106

Query: 111 LKELDGEFLEVIFCTEDMIPRSLWEAMNTKQTNLEAVKVAESLPRICFLSGLSGEEMMMF 170
           LKELDGEF+E++FCTEDMIPRSLWEA+NTKQ +L  V VA+SLPRICFLSGL+GEEMMMF
Sbjct: 107 LKELDGEFMEIVFCTEDMIPRSLWEAVNTKQPDLNRVNVAKSLPRICFLSGLTGEEMMMF 166

Query: 171 IEAFPETGLEPAVFAALVPNSADKPLQELIEEVMGDHEMLTGQQSS 216
           I+AFPETGLEP VFAA+VPNSADKP+ ELIEE+MGDHE+LTG  SS
Sbjct: 167 IDAFPETGLEPVVFAAMVPNSADKPIFELIEEIMGDHELLTGSGSS 212

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|23306352|gb|AAN17403.1| Unknown protein [Arabidopsis thaliana]

 Score =  224 bits (572), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 118/174 (67%), Positives = 140/174 (80%), Gaps = 4/174 (2%)

Query: 46  TGSRRAH-NLKLKHPPTPCA--SAEGLPGELTEDSKFVPLNADDPTFGPPALLLLGFKVE 102
           T S+  H N KLK     C   SA+ +P  L EDSKFVPL+  DP FGPP LLLLG ++ 
Sbjct: 28  TKSKSHHTNTKLKKQKL-CVRNSAQEIPKTLEEDSKFVPLDPQDPRFGPPVLLLLGLQLH 86

Query: 103 EAVKIRQFLKELDGEFLEVIFCTEDMIPRSLWEAMNTKQTNLEAVKVAESLPRICFLSGL 162
           EA KI++ LKELDGEF+E++FCT+DMI RSLWEA+ TKQ +L+ VK+AESLPRICFLSGL
Sbjct: 87  EAQKIQELLKELDGEFMEIVFCTDDMIKRSLWEAVTTKQPDLKRVKIAESLPRICFLSGL 146

Query: 163 SGEEMMMFIEAFPETGLEPAVFAALVPNSADKPLQELIEEVMGDHEMLTGQQSS 216
           +GEEMMMFI+AFPETGLEP VFAA+VPNSADKP+ EL EE+MGDHE+LTG  SS
Sbjct: 147 TGEEMMMFIDAFPETGLEPVVFAAMVPNSADKPIFELTEEIMGDHELLTGSSSS 200

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	216
TAIR|locus:504955888	212	AT3G10405 "AT3G10405" [Arabido	0.893	0.910	0.621	5.7e-59

TAIR|locus:504955888 AT3G10405 "AT3G10405" [Arabidopsis thaliana (taxid:3702)]

 Score = 605 (218.0 bits), Expect = 5.7e-59, P = 5.7e-59
 Identities = 125/201 (62%), Positives = 149/201 (74%)

Query:    23 PAVSSNPLTVSQNSKCSFSLPAK----TGSRRAH-NLKLKHPPTPCA--SAEGLPGELTE 75
             P  SS+  T   +S   F L       T S+  H N KLK     C   SA+ +P  L E
Sbjct:    13 PTSSSSSYTYLGSSSRIFGLVTSSLLWTKSKSHHTNTKLKKQKL-CVRNSAQEIPKTLEE 71

Query:    76 DSKFVPLNADDPTFGPPALLLLGFKVEEAVKIRQFLKELDGEFLEVIFCTEDMIPRSLWE 135
             DSKFVPL+  DP FGPP LLLLG ++ EA KI++ LKELDGEF+E++FCT+DMI RSLWE
Sbjct:    72 DSKFVPLDPQDPRFGPPVLLLLGLQLHEAQKIQELLKELDGEFMEIVFCTDDMIKRSLWE 131

Query:   136 AMNTKQTNLEAVKVAESLPRICFLSGLSGEEMMMFIEAFPETGLEPAVFAALVPNSADKP 195
             A+ TKQ +L+ VK+AESLPRICFLSGL+GEEMMMFI+AFPETGLEP VFAA+VPNSADKP
Sbjct:   132 AVTTKQPDLKRVKIAESLPRICFLSGLTGEEMMMFIDAFPETGLEPVVFAAMVPNSADKP 191

Query:   196 LQELIEEVMGDHEMLTGQQSS 216
             + EL EE+MGDHE+LTG  SS
Sbjct:   192 IFELTEEIMGDHELLTGSSSS 212


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.131   0.381    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      216       216   0.00088  112 3  11 22  0.41    33
                                                     32  0.50    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  593 (63 KB)
  Total size of DFA:  163 KB (2097 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  21.01u 0.12s 21.13t   Elapsed:  00:00:01
  Total cpu time:  21.01u 0.12s 21.13t   Elapsed:  00:00:01
  Start:  Thu May  9 20:37:58 2013   End:  Thu May  9 20:37:59 2013

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0009555 "pollen development" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	216
pfam12646	58	pfam12646, DUF3783, Domain of unknown function (DU	4e-15

>gnl|CDD|221688 pfam12646, DUF3783, Domain of unknown function (DUF3783)

 Score = 66.4 bits (163), Expect = 4e-15
 Identities = 18/58 (31%), Positives = 33/58 (56%)

Query: 154 PRICFLSGLSGEEMMMFIEAFPETGLEPAVFAALVPNSADKPLQELIEEVMGDHEMLT 211
             +   SG S EE+  F++A  + G+   + A L P + +  L+EL+EE++ +HE + 
Sbjct: 1   EEMLVFSGFSNEELDEFLKALRKAGVPIPLKAVLTPTNINWTLKELLEELIEEHEAMK 58

This presumed domain is functionally uncharacterized. This domain family is found in bacteria, archaea and eukaryotes, and is approximately 60 amino acids in length. Length = 58

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	216
PF12646	58	DUF3783: Domain of unknown function (DUF3783); Int	99.85
PF12646	58	DUF3783: Domain of unknown function (DUF3783); Int	94.53

>PF12646 DUF3783: Domain of unknown function (DUF3783); InterPro: IPR016621 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=99.85  E-value=2.1e-21  Score=137.35  Aligned_cols=58  Identities=31%  Similarity=0.586  Sum_probs=56.5

Q ss_pred             CcEEEEcCCCHHHHHHHHHHcccCCCCCccEEEEccCCCCCCHHHHHHHHHHHHHHhh
Q 027977          154 PRICFLSGLSGEEMMMFIEAFPETGLEPAVFAALVPNSADKPLQELIEEVMGDHEMLT  211 (216)
Q Consensus       154 ~r~vi~sGft~eEl~~~I~a~k~~Gl~~~ifAvlTPtN~~W~l~eLieEL~~EHe~m~  211 (216)
                      ++||||+||+++||+++|+++|+.|++.++||++||||.+|++.+|++||.+||+||+
T Consensus         1 e~~ll~~g~~~~el~~~l~~~r~~~~~~~~kAvlT~tN~~Wt~~~L~~El~~Eh~~m~   58 (58)
T PF12646_consen    1 EEFLLFSGFSGEELDKFLDALRKAGIPIPLKAVLTPTNINWTLKDLLEELKEEHEYMK   58 (58)
T ss_pred             CCEEEECCCCHHHHHHHHHHHHHcCCCcceEEEECCCcccCcHHHHHHHHHHHHHhcC
Confidence            5899999999999999999999999999999999999999999999999999999996

>PF12646 DUF3783: Domain of unknown function (DUF3783); InterPro: IPR016621 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=94.53  E-value=0.13  Score=36.21  Aligned_cols=48  Identities=23%  Similarity=0.148  Sum_probs=40.9

Q ss_pred             CceEEEecCChHHHHHHHHHHHhcCCcceEEEEeCCCchhchHHHHhc
Q 027977           91 PPALLLLGFKVEEAVKIRQFLKELDGEFLEVIFCTEDMIPRSLWEAMN  138 (216)
Q Consensus        91 PpaILL~GF~~EE~~kIR~lL~elg~e~vkVi~vt~e~~~~pLGel~~  138 (216)
                      ++.+++.||+.+|+.++-..++..|+...---.+|+.-..|++.+|+.
T Consensus         1 e~~ll~~g~~~~el~~~l~~~r~~~~~~~~kAvlT~tN~~Wt~~~L~~   48 (58)
T PF12646_consen    1 EEFLLFSGFSGEELDKFLDALRKAGIPIPLKAVLTPTNINWTLKDLLE   48 (58)
T ss_pred             CCEEEECCCCHHHHHHHHHHHHHcCCCcceEEEECCCcccCcHHHHHH
Confidence            478999999999999999999999994333345688899999999987

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	216
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-06

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 46.8 bits (110), Expect = 2e-06
 Identities = 31/216 (14%), Positives = 59/216 (27%), Gaps = 70/216 (32%)

Query: 11  PNHVRNSPSLLIPAVSSNPL-TVSQNSKC--SFSLPAKT--GSRRAH------NLKLKHP 59
             +      LL+       L  V QN+K   +F+L  K    +R              H 
Sbjct: 241 KPYEN---CLLV-------LLNV-QNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHI 289

Query: 60  PTPCASAEGLPGELTED------SKFVPLNADD-PTFGPPALLLLGFKVEEAVKIRQFLK 112
                S +     LT D       K++     D P               E +       
Sbjct: 290 -----SLDHHSMTLTPDEVKSLLLKYLDCRPQDLP--------------REVLTTNPRRL 330

Query: 113 ELDGEFLEVIFCTEDMIPRSLWEAMNTKQTNLEAVKVAESLPRICFLSGLSGEEM----- 167
            +  E +       D +    W+  N K  N + +           L+ L   E      
Sbjct: 331 SIIAESI------RDGLAT--WD--NWKHVNCDKLTTIIES----SLNVLEPAEYRKMFD 376

Query: 168 MMFIEAFPE-TGLEPAVFAALVPNSADKPLQELIEE 202
            + +  FP    +   + + +  +     +  ++ +
Sbjct: 377 RLSV--FPPSAHIPTILLSLIWFDVIKSDVMVVVNK 410

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	216
2l69_A	134	Rossmann 2X3 fold protein; structural genomics, no	86.62

>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}

Probab=86.62  E-value=1.6  Score=34.00  Aligned_cols=105  Identities=16%  Similarity=0.218  Sum_probs=76.1

Q ss_pred             EEEecCChHHHHHHHHHHHhcCCcceEEEEeC-CCchhchHHHHhcc----------cccchhhhhc----cCCCCcEEE
Q 027977           94 LLLLGFKVEEAVKIRQFLKELDGEFLEVIFCT-EDMIPRSLWEAMNT----------KQTNLEAVKV----AESLPRICF  158 (216)
Q Consensus        94 ILL~GF~~EE~~kIR~lL~elg~e~vkVi~vt-~e~~~~pLGel~~~----------~~~d~e~~k~----~~~~~r~vi  158 (216)
                      |.++.-+.|-+++++.+.+..|.   +|+.+. +..+.-.+.+++..          +.++|..-..    ..+.+-.+|
T Consensus         5 ivvfstdeetlrkfkdiikkngf---kvrtvrspqelkdsieelvkkynativvvvvddkewaekairfvkslgaqvlii   81 (134)
T 2l69_A            5 IVVFSTDEETLRKFKDIIKKNGF---KVRTVRSPQELKDSIEELVKKYNATIVVVVVDDKEWAEKAIRFVKSLGAQVLII   81 (134)
T ss_dssp             EEECCCCHHHHHHHHHHHHHTTC---EEEEECSHHHHHHHHHHHTTCCCCEEEEEECSSHHHHHHHHHHHHHHCCCCEEE
T ss_pred             EEEEeCCHHHHHHHHHHHHhcCc---eEEEecCHHHHHHHHHHHHHHhCCeEEEEEEccHHHHHHHHHHHHhcCCeEEEE
Confidence            34444468889999999999987   887775 45677788888763          2233332111    224778899


Q ss_pred             EcCCCHHHHHHHHHHcccCCCCCccEEEEccCCCCCCHHHHHHHH
Q 027977          159 LSGLSGEEMMMFIEAFPETGLEPAVFAALVPNSADKPLQELIEEV  203 (216)
Q Consensus       159 ~sGft~eEl~~~I~a~k~~Gl~~~ifAvlTPtN~~W~l~eLieEL  203 (216)
                      +-+-+.+.+.++-..+|..|..  +-.++.|..-...|..|+.|+
T Consensus        82 iydqdqnrleefsrevrrrgfe--vrtvtspddfkkslerlirev  124 (134)
T 2l69_A           82 IYDQDQNRLEEFSREVRRRGFE--VRTVTSPDDFKKSLERLIREV  124 (134)
T ss_dssp             EECSCHHHHHHHHHHHHHTTCC--EEEESSHHHHHHHHHHHHHHH
T ss_pred             EEeCchhHHHHHHHHHHhcCce--EEEecChHHHHHHHHHHHHHh
Confidence            9999999999999999999974  345667777777777777765

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00