Citrus Sinensis ID: 029827

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------
Protein Sequence
MAMASDSGLKIFAVVALAIAFCVQATLGEVTCESLDQNACAFAVSASGKRCVLEKQVKRSGQETYTCKTSEIEAEKLNNWIETDQCIKSCGLDRKSLGISSDSLLESGFTQKLCSSPCYGSCPNIVDLYFNLAAGEGVFLPKLCEAQGKGARRRMSEIKSSGYVAPAPLKSVAYLAAPLSAPPMAPY
Secondary Structure (PSIPRED)
cccccHHHHHHHHHHHHHHHHHHHHHcccEEccccccccccEEEccccccEEEEEEccccccEEEEEEcHHHHHHHHHcHHcHHHHHHHHcccccccccccccccccccccccccHHHHHccccHHHHHHHHccccccccHHHHHHHccccccHHHHHHHccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHHHHHHccEEEccccHHHEEEEEEccccEEEEEEEEcccccEEEEEcccHHHHHHHHHHHcHHHHHHHccccHHHcccccHHHHcHHHHHHHccHHHHHccccHEEHHHHHHHHcccccHHHHHHHcccccHHHHEEccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
MAMASDSGLKIFAVVALAIAFCVQATLGEVTCESLDQNACAFAVsasgkrcvlekqvkrsgqetytckTSEIEAEKLNNWIETDQCikscgldrkslgissdsllesgftqklcsspcygscpniVDLYFNLaagegvflpklCEAQGKGARRRMSEikssgyvapaplKSVAYLaaplsappmapy
Flexible Loop (DISEMBL)
MAMASDSGLKIFAVVALAIAFCVQATLGEVTCESLDQNACAFAvsasgkrcvlekqvkrsgqetytcktseieaeklnnwiETDQCIKSCGLDRKSLGISSDSLLESGFTQKLCSSPCYGSCPNIVDLYFNLAAGEGVFLPKLCEAQGKGARRRMSEIkssgyvapapLKSVAYLAAPLSAPPMAPY
Low Complexity Region (SEG)
MAMASDSGLKIFAVVALAIAFCVQATLGEVTCESLDQNACAFAVSASGKRCVLEKQVKRSGQETYTCKTSEIEAEKLNNWIETDQCIKSCGLDRKSLGISSDSLLESGFTQKLCSSPCYGSCPNIVDLYFNLAAGEGVFLPKLCEAQGKGARRRMSEIKSSGYVAPAPLKSVaylaaplsappmapy
Disordered region (IsUnstruct)
********LKIFAVVALAIAFCVQATLGEVTCESLDQNACAFAVSASGKRCVLEKQVKRSGQETYTCKTSEIEAEKLNNWIETDQCIKSCGLDRKSLGISSDSLLESGFTQKLCSSPCYGSCPNIVDLYFNLAAGEGVFLPKLCEA*************************VAYL************
Disordered Region (DISOPRED)
***********FAVVALAIAFCVQATLGEVTCESLDQNACAFAVSASGKRCVLEKQVKRSGQETYTCKTSEIEAEKLNNWIETDQCIKSCGLDRKSLGISSDSLLESGFTQKLCSSPCYGSCPNIVDLYFNLAAGEGVFLPKLCE******************************************
Disordered Region (DISEMBL)
MAMASDSGLKIFAVVALAIAFCVQATLGEVTCESLDQNACAFAVSASGKRCVLEKQVKRSGQETYTCKTSEIEAEKLNNWIETDQCIKSCGLDRKSLGISSDSLLESGFTQKLCSSPCYGSCPNIVDLYFNLAAGEGVFLPKLCEA***********IKSSGYVAPAPLKSVAYLAAPLSAPPMAPY
Disordered Region (DISPRO)
*****DSGLKIFAVVALAIAFCVQATLGEVTCESLDQNACAFAVSASGKRCVLEKQVKRSGQETYTCKTSEIEAEKLNNWIETDQCIKSCGLDRKSLGISSDSLLESGFTQKLCSSPCYGSCPNIVDLYFNLAAGEGVFLPKLCEAQGKGAR**********Y************************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAMASDSGLKIFAVVALAIAFCVQATLGEVTCESLDQNACAFAVSASGKRCVLEKQVKRSGQETYTCKTSEIEAEKLNNWIETDQCIKSCGLDRKSLGISSDSLLESGFTQKLCSSPCYGSCPNIVDLYFNLAAGEGVFLPKLCEAQGKGARRRMSEIKSSGYVAPAPLKSVAYLAAPLSAPPMAPY
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	187
225470755	186	PREDICTED: uncharacterized protein LOC10	0.978	0.983	0.677	6e-69
225470749	186	PREDICTED: uncharacterized protein LOC10	0.962	0.967	0.677	1e-67
224137020	193	predicted protein [Populus trichocarpa]	0.951	0.922	0.681	3e-67
224120072	191	predicted protein [Populus trichocarpa]	0.951	0.931	0.652	1e-66
356574493	194	PREDICTED: uncharacterized protein LOC10	0.962	0.927	0.666	3e-65
359490640	199	PREDICTED: uncharacterized protein LOC10	0.930	0.874	0.668	6e-65
302143862	196	unnamed protein product [Vitis vinifera]	0.930	0.887	0.668	1e-64
871485	185	PAR-1a [Nicotiana tabacum]	0.914	0.924	0.660	2e-64
871487	185	PAR-1b [Nicotiana tabacum]	0.914	0.924	0.655	3e-64
359807283	194	uncharacterized protein LOC100787709 pre	0.962	0.927	0.661	3e-64

>gi|225470755|ref|XP_002267611.1| PREDICTED: uncharacterized protein LOC100244692 [Vitis vinifera] gi|147860459|emb|CAN82560.1| hypothetical protein VITISV_031304 [Vitis vinifera] gi|302143861|emb|CBI22722.3| unnamed protein product [Vitis vinifera]

 Score =  265 bits (677), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 126/186 (67%), Positives = 153/186 (82%), Gaps = 3/186 (1%)

Query: 3   MASDSGLKIFAVVALAIAFCVQATLGEVTCESLDQNACAFAVSASGKRCVLEKQVKRSGQ 62
           MA + GLK  A++AL +A CVQ +LG  TCE+L+++ CAFAVS+SGKRCVLEK V+RSG+
Sbjct: 1   MAPNFGLKSLAILALTLAVCVQGSLGGTTCENLNKDTCAFAVSSSGKRCVLEKHVRRSGE 60

Query: 63  ETYTCKTSEIEAEKLNNWIETDQCIKSCGLDRKSLGISSDSLLESGFTQKLCSSPCYGSC 122
           E Y C+TSEIEA+K+ +W+E+DQCI++CGLDRKSLGISSDSLLE GFT+KLCS+ CY  C
Sbjct: 61  EAYVCRTSEIEADKVKDWVESDQCIEACGLDRKSLGISSDSLLECGFTRKLCSTQCYNGC 120

Query: 123 PNIVDLYFNLAAGEGVFLPKLCEAQGKGARRRMSEIKSSGYVAPAP---LKSVAYLAAPL 179
           PNIVDLYFNLAAGEGVFLPKLCEAQ   ARR M+EI+SSG+VAP P   + SV Y+ AP 
Sbjct: 121 PNIVDLYFNLAAGEGVFLPKLCEAQRGDARREMAEIRSSGFVAPGPVSGVNSVKYVVAPA 180

Query: 180 SAPPMA 185
            AP  A
Sbjct: 181 VAPTSA 186

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225470749|ref|XP_002267610.1| PREDICTED: uncharacterized protein LOC100251502 [Vitis vinifera] gi|302143863|emb|CBI22724.3| unnamed protein product [Vitis vinifera]

 Score =  261 bits (666), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 124/183 (67%), Positives = 151/183 (82%), Gaps = 3/183 (1%)

Query: 3   MASDSGLKIFAVVALAIAFCVQATLGEVTCESLDQNACAFAVSASGKRCVLEKQVKRSGQ 62
           MAS+ GL   AV+AL +A CVQ +LG +TCE+L+++ CA+AVS+SGKRCVLEK V+RSG+
Sbjct: 1   MASNFGLMSLAVLALTLAVCVQGSLGGITCENLNKDTCAYAVSSSGKRCVLEKHVRRSGE 60

Query: 63  ETYTCKTSEIEAEKLNNWIETDQCIKSCGLDRKSLGISSDSLLESGFTQKLCSSPCYGSC 122
           E Y C+TSEIEA+K+ +W+E+DQCI++CG+DRKSLGISSDSLLE GFT KLCSS CY SC
Sbjct: 61  EAYVCRTSEIEADKVKDWVESDQCIEACGVDRKSLGISSDSLLECGFTHKLCSSQCYNSC 120

Query: 123 PNIVDLYFNLAAGEGVFLPKLCEAQGKGARRRMSEIKSSGYVAPAPLKS---VAYLAAPL 179
           PNIVDLYFNLAAGEGVFLPKLCEAQ   ARR M+EI+SSG+VAP P+     V +  AP 
Sbjct: 121 PNIVDLYFNLAAGEGVFLPKLCEAQRGDARREMAEIRSSGFVAPGPVSGVNPVKFGVAPA 180

Query: 180 SAP 182
            AP
Sbjct: 181 VAP 183

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224137020|ref|XP_002322474.1| predicted protein [Populus trichocarpa] gi|118486045|gb|ABK94866.1| unknown [Populus trichocarpa] gi|222869470|gb|EEF06601.1| predicted protein [Populus trichocarpa]

 Score =  259 bits (663), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 122/179 (68%), Positives = 146/179 (81%), Gaps = 1/179 (0%)

Query: 7   SGLKIFAVVALAIAFCVQATLGEVTCESLDQNACAFAVSASGKRCVLEKQVKRSGQETYT 66
           S   I +V+ALA+  CVQ TLGE+TCE LDQ+ CA+A+S+SGKRCVLEK VKR+G+E YT
Sbjct: 3   SSFNILSVLALALTICVQGTLGEITCEHLDQDTCAYAISSSGKRCVLEKSVKRTGEEAYT 62

Query: 67  CKTSEIEAEKLNNWIETDQCIKSCGLDRKSLGISSDSLLESGFTQKLCSSPCYGSCPNIV 126
           C+TSEI+A++L NWIETDQCIK+CGLDRKSLGISSDSLLES F Q+LCS  CY SCPN+V
Sbjct: 63  CRTSEIDADRLRNWIETDQCIKACGLDRKSLGISSDSLLESRFAQQLCSPQCYDSCPNVV 122

Query: 127 DLYFNLAAGEGVFLPKLCEAQGKGARR-RMSEIKSSGYVAPAPLKSVAYLAAPLSAPPM 184
           DLYFNLAA EGVFLP LCEAQ    RR  M++IKS+G+VAP P+K+V Y  AP    P+
Sbjct: 123 DLYFNLAAAEGVFLPGLCEAQEGNVRRGLMADIKSAGFVAPGPVKAVKYAYAPAPVEPV 181

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224120072|ref|XP_002318235.1| predicted protein [Populus trichocarpa] gi|222858908|gb|EEE96455.1| predicted protein [Populus trichocarpa]

 Score =  257 bits (657), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 124/190 (65%), Positives = 152/190 (80%), Gaps = 12/190 (6%)

Query: 7   SGLKIFAVVALAIAFCVQATLGEVTCESLDQNACAFAVSASGKRCVLEKQVKRSGQETYT 66
           S  +I +V+A+A+A CVQ TLGE+ CE LDQ+ CA+A+S++GKRCVLEK+VKR+G+E YT
Sbjct: 3   SSFRILSVLAIALAICVQGTLGEIACEHLDQDTCAYAISSAGKRCVLEKRVKRTGEEAYT 62

Query: 67  CKTSEIEAEKLNNWIETDQCIKSCGLDRKSLGISSDSLLESGFTQKLCSSPCYGSCPNIV 126
           C+TSEIEA++L NWIETDQCIK+CGLDRKSLGIS+DSLLES F Q+LCS  CY SCPN++
Sbjct: 63  CRTSEIEADRLRNWIETDQCIKACGLDRKSLGISTDSLLESRFAQQLCSPQCYYSCPNVI 122

Query: 127 DLYFNLAAGEGVFLPKLCEAQGKGARR-RMSEIKSSGYVAPAPLKSVAYLAAP------- 178
           DLYFNLAA EGVFLPKLCEAQ   ARR  M++IKSSG+VAP P+K   Y  AP       
Sbjct: 123 DLYFNLAAAEGVFLPKLCEAQEGNARRGLMADIKSSGFVAPGPVK---YTVAPAPVEPVK 179

Query: 179 -LSAPPMAPY 187
              +P M+PY
Sbjct: 180 YTVSPAMSPY 189

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356574493|ref|XP_003555381.1| PREDICTED: uncharacterized protein LOC100784217 [Glycine max]

 Score =  253 bits (645), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 120/180 (66%), Positives = 144/180 (80%)

Query: 3   MASDSGLKIFAVVALAIAFCVQATLGEVTCESLDQNACAFAVSASGKRCVLEKQVKRSGQ 62
           MAS+  L+   + ALA +  +Q TLG + CESL  + C+FAV+++GKRCVLEKQVKR+G+
Sbjct: 1   MASNFSLRTLMIFALAFSLALQGTLGGIECESLSHDTCSFAVTSAGKRCVLEKQVKRTGE 60

Query: 63  ETYTCKTSEIEAEKLNNWIETDQCIKSCGLDRKSLGISSDSLLESGFTQKLCSSPCYGSC 122
           E YTC+TSEIEA+KL + IET+QCIK+CGLDRKSLGISSDSLL+S FTQKLCS  CY  C
Sbjct: 61  EAYTCRTSEIEADKLKDHIETEQCIKACGLDRKSLGISSDSLLQSSFTQKLCSPICYQCC 120

Query: 123 PNIVDLYFNLAAGEGVFLPKLCEAQGKGARRRMSEIKSSGYVAPAPLKSVAYLAAPLSAP 182
           PN+VDLYFNLAAGEGVFLPKLCEAQG  ARR M+E+KSSG VAP P+  V + A P   P
Sbjct: 121 PNVVDLYFNLAAGEGVFLPKLCEAQGLNARRGMAELKSSGIVAPGPVHGVQFTATPPINP 180

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359490640|ref|XP_002267534.2| PREDICTED: uncharacterized protein LOC100254969 [Vitis vinifera]

 Score =  251 bits (642), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 117/175 (66%), Positives = 147/175 (84%), Gaps = 1/175 (0%)

Query: 12  FAVVALAIAFCVQATLGEVTCESLDQNACAFAVSASGKRCVLEKQVKRSGQETYTCKTSE 71
            A++AL +A CVQ +LG +TCE+L+++ CAFAVS+SGKRCVLEK V+RSG+E Y C+TSE
Sbjct: 23  LAILALVLAVCVQGSLGGITCENLNKDTCAFAVSSSGKRCVLEKHVRRSGEEAYVCRTSE 82

Query: 72  IEAEKLNNWIETDQCIKSCGLDRKSLGISSDSLLESGFTQKLCSSPCYGSCPNIVDLYFN 131
           IEA+K+ +W+E+DQCI++CGLDRKSLGISSDSLLE GFT+KLCS+ CY  CPNIVDLYFN
Sbjct: 83  IEADKVKDWVESDQCIEACGLDRKSLGISSDSLLECGFTRKLCSTQCYNGCPNIVDLYFN 142

Query: 132 LAAGEGVFLPKLCEAQGKGARRRMSEIKSSGYVAPAPLKSVAYLAAPLSAPPMAP 186
           +AAGEGVFLPKLCEAQ   ARR M+EI+SSG+VAP P+  V  +   + AP +AP
Sbjct: 143 VAAGEGVFLPKLCEAQRGDARREMAEIRSSGFVAPRPVSGVNPVKHGV-APAVAP 196

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302143862|emb|CBI22723.3| unnamed protein product [Vitis vinifera]

 Score =  251 bits (641), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 117/175 (66%), Positives = 147/175 (84%), Gaps = 1/175 (0%)

Query: 12  FAVVALAIAFCVQATLGEVTCESLDQNACAFAVSASGKRCVLEKQVKRSGQETYTCKTSE 71
            A++AL +A CVQ +LG +TCE+L+++ CAFAVS+SGKRCVLEK V+RSG+E Y C+TSE
Sbjct: 20  LAILALVLAVCVQGSLGGITCENLNKDTCAFAVSSSGKRCVLEKHVRRSGEEAYVCRTSE 79

Query: 72  IEAEKLNNWIETDQCIKSCGLDRKSLGISSDSLLESGFTQKLCSSPCYGSCPNIVDLYFN 131
           IEA+K+ +W+E+DQCI++CGLDRKSLGISSDSLLE GFT+KLCS+ CY  CPNIVDLYFN
Sbjct: 80  IEADKVKDWVESDQCIEACGLDRKSLGISSDSLLECGFTRKLCSTQCYNGCPNIVDLYFN 139

Query: 132 LAAGEGVFLPKLCEAQGKGARRRMSEIKSSGYVAPAPLKSVAYLAAPLSAPPMAP 186
           +AAGEGVFLPKLCEAQ   ARR M+EI+SSG+VAP P+  V  +   + AP +AP
Sbjct: 140 VAAGEGVFLPKLCEAQRGDARREMAEIRSSGFVAPRPVSGVNPVKHGV-APAVAP 193

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|871485|emb|CAA58733.1| PAR-1a [Nicotiana tabacum]

 Score =  250 bits (638), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 115/174 (66%), Positives = 142/174 (81%), Gaps = 3/174 (1%)

Query: 12  FAVVALAIAFCVQATLGEVTCESLDQNACAFAVSASGKRCVLEKQVKRSGQETYTCKTSE 71
            A+VA A+ FCVQ TLG +TCE+L++++C FA+S++GKRCVLEK ++RSG+E Y CKT E
Sbjct: 10  LAIVACALVFCVQVTLGSITCENLNKDSCTFAISSTGKRCVLEKHLRRSGEEVYACKTLE 69

Query: 72  IEAEKLNNWIETDQCIKSCGLDRKSLGISSDSLLESGFTQKLCSSPCYGSCPNIVDLYFN 131
           IEA+KL NWIETDQCI++CG+DR +LGISSDSLLE  FTQKLCS  CY  CPNIVDLYFN
Sbjct: 70  IEADKLKNWIETDQCIQACGVDRNTLGISSDSLLECHFTQKLCSPQCYKHCPNIVDLYFN 129

Query: 132 LAAGEGVFLPKLCEAQGKGARRRMSEIKSSGYVAPAP---LKSVAYLAAPLSAP 182
           LAAG+GV+LP+LCE QG  ARR M+EIK+SG VAPAP   +K V ++  P  AP
Sbjct: 130 LAAGQGVYLPRLCEKQGGNARRGMAEIKNSGIVAPAPESGVKPVNFMITPAMAP 183

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|871487|emb|CAA58731.1| PAR-1b [Nicotiana tabacum]

 Score =  249 bits (637), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 114/174 (65%), Positives = 144/174 (82%), Gaps = 3/174 (1%)

Query: 12  FAVVALAIAFCVQATLGEVTCESLDQNACAFAVSASGKRCVLEKQVKRSGQETYTCKTSE 71
            A+VA A+ FCVQ TLG +TCE+L++++CAFA+S++GKRCVLEK+++RSG+E YTCKTSE
Sbjct: 10  LAIVACALVFCVQVTLGSITCENLNKDSCAFAISSTGKRCVLEKRLQRSGEEVYTCKTSE 69

Query: 72  IEAEKLNNWIETDQCIKSCGLDRKSLGISSDSLLESGFTQKLCSSPCYGSCPNIVDLYFN 131
           IEA+KL +WIETDQCI++CG+DR + GISSDSLLE  FTQKLCS  CY  CPNI+DLYFN
Sbjct: 70  IEADKLKDWIETDQCIQACGVDRNTFGISSDSLLECHFTQKLCSPQCYKHCPNIIDLYFN 129

Query: 132 LAAGEGVFLPKLCEAQGKGARRRMSEIKSSGYVAPAP---LKSVAYLAAPLSAP 182
           LAAGEGV+LP+LCE QG  ARR M+EIKSSG +AP+P   + S  ++  P  AP
Sbjct: 130 LAAGEGVYLPRLCEEQGGNARRGMAEIKSSGILAPSPESEVNSANFMITPAMAP 183

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359807283|ref|NP_001241627.1| uncharacterized protein LOC100787709 precursor [Glycine max] gi|255640396|gb|ACU20485.1| unknown [Glycine max]

 Score =  249 bits (636), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 119/180 (66%), Positives = 144/180 (80%)

Query: 3   MASDSGLKIFAVVALAIAFCVQATLGEVTCESLDQNACAFAVSASGKRCVLEKQVKRSGQ 62
           MAS+  L+   + +LA    ++ TLG + CE+L  + C+FAVS++GKRCVLEK+VKR+G+
Sbjct: 1   MASNFSLRTLMIFSLAFWLALKGTLGGIECETLSHDTCSFAVSSAGKRCVLEKRVKRTGE 60

Query: 63  ETYTCKTSEIEAEKLNNWIETDQCIKSCGLDRKSLGISSDSLLESGFTQKLCSSPCYGSC 122
           E YTC+TSEIEA+KL + IET+QCIK+CGLDRKSLGISSDSLLES FTQKLCS  CY  C
Sbjct: 61  EAYTCRTSEIEADKLKDHIETEQCIKACGLDRKSLGISSDSLLESTFTQKLCSPHCYQCC 120

Query: 123 PNIVDLYFNLAAGEGVFLPKLCEAQGKGARRRMSEIKSSGYVAPAPLKSVAYLAAPLSAP 182
           PN+VDLYFNLAAGEGVFLPKLCEAQG  ARR M+E+KSSG VAP P+  V + AAP   P
Sbjct: 121 PNVVDLYFNLAAGEGVFLPKLCEAQGVNARRGMAELKSSGIVAPGPVHGVQFAAAPPINP 180

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	187
TAIR|locus:2156657	195	AT5G52390 "AT5G52390" [Arabido	0.812	0.779	0.660	1.2e-51
TAIR|locus:2084495	183	AT3G54040 "AT3G54040" [Arabido	0.866	0.885	0.508	1.4e-41

TAIR|locus:2156657 AT5G52390 "AT5G52390" [Arabidopsis thaliana (taxid:3702)]

 Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
 Identities = 101/153 (66%), Positives = 123/153 (80%)

Query:    11 IFAVVALAIAFCVQATLGE-VTCESLDQNACAFAVSASGKRCVLEKQVKRSGQETYTCKT 69
             +F    + +A   Q T G+ V CE+LD+N CAFAVS++GKRCVLEK +KRSG E YTC++
Sbjct:     6 VFVAFMILLAIYSQTTFGDDVKCENLDENTCAFAVSSTGKRCVLEKSMKRSGIEVYTCRS 65

Query:    70 SEIEAEKLNNWIETDQCIKSCGLDRKSLGISSDSLLESGFTQKLCSSPCYGSCPNIVDLY 129
             SEIEA K+ N IE+D+CIK+CGLDRK+LGISSD+LLES FT KLCS  C   CPN+VDLY
Sbjct:    66 SEIEANKVTNIIESDECIKACGLDRKALGISSDALLESQFTHKLCSVKCLNQCPNVVDLY 125

Query:   130 FNLAAGEGVFLPKLCEAQGKGARRRMSEIKSSG 162
             FNLAAGEGV+LPKLCE+Q   +RR MSEI+SSG
Sbjct:   126 FNLAAGEGVYLPKLCESQEGKSRRAMSEIRSSG 158

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2084495 AT3G54040 "AT3G54040" [Arabidopsis thaliana (taxid:3702)]

 Score = 441 (160.3 bits), Expect = 1.4e-41, P = 1.4e-41
 Identities = 86/169 (50%), Positives = 119/169 (70%)

Query:     5 SDSGLKIFAVVALAIAFCVQATLGE-VTCESLDQNACAFAVSASGKRCVLEKQVKRSGQE 63
             S S LK+   + L ++  + A +GE + CE+L  N C+F++SASGKRC+LE     +G+ 
Sbjct:     2 SFSSLKL--PIFLILSSLLHAAIGENIVCENLPTNMCSFSISASGKRCILET-ANVAGE- 57

Query:    64 TYTCKTSEIEAEKLNNWIETDQCIKSCGLDRKSLGISSDSLLESGFTQKLCSSPCYGSCP 123
              +TC+TS ++ E + N +ETD+C+ +CG+DRK++GISSDSL+E+GF  KLCSS C   CP
Sbjct:    58 -FTCRTSAVDVEGIVNHVETDECVSACGVDRKTVGISSDSLMEAGFAAKLCSSACLDYCP 116

Query:   124 NIVDLYFNLAAGEGVFLPKLCEAQGKGARRRMSEIKSSGYVAPAPLKSV 172
             NI+DLYFNLAAGEG FLP LC+AQ    +R M E  SSG  AP P+  +
Sbjct:   117 NILDLYFNLAAGEGAFLPDLCDAQRMNPQRSMMEFISSG-AAPGPVSEI 164


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.130   0.384    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      187       172   0.00093  108 3  11 22  0.40    32
                                                     31  0.48    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  585 (62 KB)
  Total size of DFA:  149 KB (2090 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  16.74u 0.26s 17.00t   Elapsed:  00:00:01
  Total cpu time:  16.74u 0.26s 17.00t   Elapsed:  00:00:01
  Start:  Thu May  9 20:01:21 2013   End:  Thu May  9 20:01:22 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0000041 "transition metal ion transport" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00009151001 SubName- Full=Putative uncharacterized protein (Chromosome undetermined scaffold_222, whole genome shotgun sequence); (186 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	187
pfam06521	158	pfam06521, PAR1, PAR1 protein	4e-82

>gnl|CDD|191549 pfam06521, PAR1, PAR1 protein

 Score =  239 bits (612), Expect = 4e-82
 Identities = 108/158 (68%), Positives = 129/158 (81%), Gaps = 1/158 (0%)

Query: 30  VTCESLDQNACAFAVSASGKRCVLEKQVKRSGQETYTCKTSEIEAEKLNNWIETDQCIKS 89
           + CE+L++N+CAFA+S++GKRCVLEK ++RSG+E YTC+TSEIEA+KL NWIETD+CI +
Sbjct: 2   IVCENLNENSCAFAISSTGKRCVLEKHLRRSGEEVYTCRTSEIEADKLKNWIETDECISA 61

Query: 90  CGLDRKSLGISSDSLLESGFTQKLCSSPCYGSCPNIVDLYFNLAAGEGVFLPKLCEAQGK 149
           CG+DRK+LGISSDSLLESGFT KLCS  C   CPNIVDLYFNLAAGEGV+LPKLCEAQG 
Sbjct: 62  CGVDRKTLGISSDSLLESGFTAKLCSPACLKHCPNIVDLYFNLAAGEGVYLPKLCEAQGG 121

Query: 150 GARRRMSEIKSSGYVAPAPLKSVAYLAAPLSAPPMAPY 187
            ARR M+EI+SSG VAP P   V        +P MAP 
Sbjct: 122 NARRSMAEIRSSGIVAPGPESEVKPSNFM-ISPAMAPA 158

This family consists of several plant specific PAR1 proteins from Nicotiana tabacum and Arabidopsis thaliana. The function of this family is unknown. Length = 158

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	187
PF06521	158	PAR1: PAR1 protein; InterPro: IPR009489 This famil	100.0

>PF06521 PAR1: PAR1 protein; InterPro: IPR009489 This family consists of several plant specific PAR1 proteins from Nicotiana tabacum (Common tobacco) and Arabidopsis thaliana (Mouse-ear cress)

Probab=100.00  E-value=6.8e-92  Score=571.76  Aligned_cols=155  Identities=67%  Similarity=1.157  Sum_probs=150.5

Q ss_pred             ceeecCCCcccceeeeccCCCceeeeeecccCCceeeEeehhHHHHHHhhhhhhhhHHHHhhCCCcceeccCchhhhccc
Q 029827           29 EVTCESLDQNACAFAVSASGKRCVLEKQVKRSGQETYTCKTSEIEAEKLNNWIETDQCIKSCGLDRKSLGISSDSLLESG  108 (187)
Q Consensus        29 ~i~CE~Lp~e~CAFaVSSsGkRCvLEk~~~~~g~~~y~CqTSev~ae~~~~~IEtDeCv~ACGvdR~svGiSsDslle~~  108 (187)
                      +|+|||||+|+|||||||+||||||||++++||+++||||||||+|||+++||||||||+||||||||||||||+|+|++
T Consensus         1 ~i~CE~Lp~e~CAFaVsssG~RCvLEk~~~~~g~~~y~C~TSev~ae~~~~~IEtDeCv~ACGvdR~svGiSsDslle~~   80 (158)
T PF06521_consen    1 EIVCEDLPAEVCAFAVSSSGKRCVLEKSVKRDGEEEYQCQTSEVMAEKLKEWIETDECVKACGVDRMSVGISSDSLLEPR   80 (158)
T ss_pred             CcccccCChhhceeeeecCCcceEEeeccccCCceEEEecchHHHHHHHHhhhhHHHHHHHhCcchhhccccHHHhhccc
Confidence            48999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccCChhhhccCCchhhhhhhhccccCCCchHHHHhhcCCcchhhhhhhhcccccCCCccch---hhhcccCCCCC
Q 029827          109 FTQKLCSSPCYGSCPNIVDLYFNLAAGEGVFLPKLCEAQGKGARRRMSEIKSSGYVAPAPLKSV---AYLAAPLSAPP  183 (187)
Q Consensus       109 Ft~kLCS~~C~~~CPNIVDLY~nLAAGEGv~LP~LCe~q~~~~rR~m~E~~Ssg~~ap~pv~~v---~~~~~Pa~aP~  183 (187)
                      ||+|||||+||++||||||||||||||||||||+||++||+|+||+|+|++|+|++||||++.+   ++.++||+||+
T Consensus        81 f~~kLCS~~C~~~CPNIVDLY~nLAAGEGv~LP~LCe~q~~~~rR~m~e~~Ssg~~ap~p~~~v~~~~~~~aPA~aP~  158 (158)
T PF06521_consen   81 FTSKLCSPACYNNCPNIVDLYFNLAAGEGVYLPELCEAQRGNPRRAMAEIKSSGIAAPGPVSSVSPVDITIAPAPAPA  158 (158)
T ss_pred             hhhhhcCHHHHhHCccHHHHHHHhhhccCCchHHHHHhcCCccchhhhhccccccCCCCCccccChhhhccCCCCCCC
Confidence            9999999999999999999999999999999999999999999999999999999999997555   57799999985

The function of this family is unknown.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00