Citrus Sinensis ID: 030821

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-
Protein Sequence
MLSLQSLSFLHNKPILSLERLNHYVNNPSPSVVARAVENNNSQNSKFEIDPEEARQALQRLDQQLKSLSNKQISSPKIKAADVKITRGPGPAEQETLEISGSFLTNTTVALLIFTILYNVLFYTVIKPSIDGPDDIPASAPDTTMATNKSPEAALVKELSPPPFLEDSVQR
Secondary Structure (PSIPRED)
ccccccccccccccccccccccEEEccccccEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHcccccccccccEEEcccccccEEEEEEEccccccccccccHHHHHHHHHHHHHHHHHccccccccccccccccEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHEcccccccccccccccccEEEccccHHHHHHHHccccccccccccc
Coil and Loop (DISEMBL)
mlslqslsflhnkpilslerlnhyvnnpspSVVARAVEnnnsqnskfeidpEEARQALQRLDQQLKSLsnkqisspkikaadvkitrgpgpaeqetleisgsfltNTTVALLIFTILYNVLFYtvikpsidgpddipasapdttmatnkspeaalvkelspppfledsvqr
Flexible Loop (DISEMBL)
mlslqslsflhnkpilSLERLNHYVNNPSPSVVARAVENNNSQNSKFEIDPEEARQALQRLDQQLKslsnkqisspkikaadvkitRGPGPAEQETLEISGSFLTNTTVALLIFTILYNVLFYTVIKPSIDGPDDIPASAPDTTMATNKSPEaalvkelspppfledsvqr
Low Complexity Region (SEG)
MLSLQSLSFLHNKPILSLERLNHYVNNPSPSVVARAVENNNSQNSKFEIDPEEarqalqrldqqlKSLSNKQISSPKIKAADVKITRGPGPAEQETLEISGSFLTNTTVALLIFTILYNVLFYTVIKPSIDGPDDIPASAPDTTMATNKSPEAALVKELSPPPFLEDSVQR
Disordered region (IsUnstruct)
*********LHNKPILSLERLNHYV************************************************************************EISGSFLTNTTVALLIFTILYNVLFYTVIKPS******************************************
Disordered Region (DISOPRED)
*********L*NKPILSLERLNHYVNNPS**********************************************************************SGSFLTNTTVALLIFTILYNVLFYTVIKPSIDGP********************ALVKELSPPPFL******
Disordered Region (DISEMBL)
MLSLQSLSFLHNKPILSLERLNHYVNNPSPSVVARAVENNNSQNSKFEIDPEEARQALQRLDQQLKSLSNKQISSPKIKAADVKITRGPGPAEQETLEISGSFLTNTTVALLIFTILYNVLFYTVIKPSIDGPDDIPASAPDTTMATNKSPEAALVKELSPPPFLEDSVQR
Disordered Region (DISPRO)
MLSLQSLSFLHNKPILSLERLNHYVNNPSPSVVARAVENNNSQNSKFEIDPEEARQALQRLDQQLKSLSNKQISSPKIKAADVKITRG*GPAEQETLEISGSFLTNTTVALLIFTILYNVLFYTVIKPSIDGPDDIPASAPDTTMATNKSPEAALVKELSPPPFLE*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MLSLQSLSFLHNKPILSLERLNHYVNNPSPSVVARAVENNNSQNSKFEIDxxxxxxxxxxxxxxxxxxxxxQISSPKIKAADVKITRGPGPAEQETLEISGSFLTNTTVALLIFTILYNVLFYTVIKPSIDGPDDIPASAPDTTMATNKSPEAALVKELSPPPFLEDSVQR
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	171
356527206	154	PREDICTED: uncharacterized protein LOC10	0.766	0.850	0.429	4e-23
388516049	149	unknown [Medicago truncatula]	0.730	0.838	0.465	3e-20
357460365	145	hypothetical protein MTR_3g061480 [Medic	0.730	0.862	0.465	4e-20
449451201	207	PREDICTED: uncharacterized protein LOC10	0.736	0.608	0.448	8e-20
388505690	159	unknown [Lotus japonicus]	0.625	0.672	0.469	9e-20
255544872	178	conserved hypothetical protein [Ricinus	0.561	0.539	0.524	3e-19
18379315	157	uncharacterized protein [Arabidopsis tha	0.725	0.789	0.378	2e-15
21617897	139	unknown [Arabidopsis thaliana]	0.573	0.705	0.425	2e-13
359478733	145	PREDICTED: uncharacterized protein LOC10	0.543	0.641	0.5	3e-12
147784772	138	hypothetical protein VITISV_008768 [Viti	0.502	0.623	0.489	8e-12

>gi|356527206|ref|XP_003532203.1| PREDICTED: uncharacterized protein LOC100783048 [Glycine max]

 Score =  112 bits (281), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 61/142 (42%), Positives = 92/142 (64%), Gaps = 11/142 (7%)

Query: 1   MLSLQSLSFLHNKPILSLERLN-------HYVNNPSPSV--VARAVENNNSQNSKFEIDP 51
             S+Q L F  + P L +  +N        +  NPS S   +  AV+ + SQ+ ++E+DP
Sbjct: 13  FFSMQLLCFYKHPPPLFVHNINEGIFKYKRFFTNPSSSSRGIVHAVKED-SQSQQYEVDP 71

Query: 52  EEARQALQRLDQQLKSLSNK-QISSPKIKAADVKITRGPGPAEQETLEISGSFLTNTTVA 110
           ++AR+AL++LD+Q++SLSNK Q+S+PK++ +D+K+         E LEIS SFLT     
Sbjct: 72  DKAREALKKLDEQIQSLSNKKQVSTPKLRVSDMKLPTEQASRNDEKLEISDSFLTTLAAG 131

Query: 111 LLIFTILYNVLFYTVIKPSIDG 132
           L++FT+ YNVLFY VIKP+IDG
Sbjct: 132 LVLFTVFYNVLFYAVIKPAIDG 153

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388516049|gb|AFK46086.1| unknown [Medicago truncatula]

 Score =  103 bits (256), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 61/131 (46%), Positives = 88/131 (67%), Gaps = 6/131 (4%)

Query: 6   SLSFLHN--KPILSLERLNHYVNNPSPSVVARAVENNNSQNSKFEIDPEEARQALQRLDQ 63
           S   LHN  + I    RL  Y ++ +   +  A++ ++ Q   +EIDPE+AR+AL+ LDQ
Sbjct: 22  SKQLLHNDDRGIFKERRLIKYSSSFNSCCIVHALKEDSKQ---YEIDPEKAREALKELDQ 78

Query: 64  QLKSLSNKQISSPKIKAADVKITRGPGPAEQE-TLEISGSFLTNTTVALLIFTILYNVLF 122
           +++SLSN+++SSPK+K +++K TR    +E    LEIS SFL      L++FTILYNVLF
Sbjct: 79  KIQSLSNREVSSPKLKVSEMKPTREEVISENNGKLEISESFLALLAGGLVLFTILYNVLF 138

Query: 123 YTVIKPSIDGP 133
            TVIKP+IDGP
Sbjct: 139 LTVIKPAIDGP 149

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357460365|ref|XP_003600464.1| hypothetical protein MTR_3g061480 [Medicago truncatula] gi|355489512|gb|AES70715.1| hypothetical protein MTR_3g061480 [Medicago truncatula]

 Score =  102 bits (255), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 61/131 (46%), Positives = 88/131 (67%), Gaps = 6/131 (4%)

Query: 6   SLSFLHN--KPILSLERLNHYVNNPSPSVVARAVENNNSQNSKFEIDPEEARQALQRLDQ 63
           S   LHN  + I    RL  Y ++ +   +  A++ ++ Q   +EIDPE+AR+AL+ LDQ
Sbjct: 18  SKQLLHNDDRGIFKERRLIKYSSSFNSCCIVHALKEDSKQ---YEIDPEKAREALKELDQ 74

Query: 64  QLKSLSNKQISSPKIKAADVKITRGPGPAEQE-TLEISGSFLTNTTVALLIFTILYNVLF 122
           +++SLSN+++SSPK+K +++K TR    +E    LEIS SFL      L++FTILYNVLF
Sbjct: 75  KIQSLSNREVSSPKLKVSEMKPTREEVISENNGKLEISESFLALLAGGLVLFTILYNVLF 134

Query: 123 YTVIKPSIDGP 133
            TVIKP+IDGP
Sbjct: 135 LTVIKPAIDGP 145

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449451201|ref|XP_004143350.1| PREDICTED: uncharacterized protein LOC101220685 [Cucumis sativus] gi|449482602|ref|XP_004156343.1| PREDICTED: uncharacterized protein LOC101227639 [Cucumis sativus]

 Score =  102 bits (253), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 66/147 (44%), Positives = 86/147 (58%), Gaps = 21/147 (14%)

Query: 1   MLSLQSLS-------FLHNKP----ILSLERLN--HYVNNPSPSVVARAVENNNSQNSKF 47
           MLSLQSL        F+  K     +L + + +  HY  +    + A+      S + +F
Sbjct: 33  MLSLQSLFNQNLRPPFVTTKKCSDGVLKIRKFHPLHYSASHFSILCAK-----ESDSQQF 87

Query: 48  EIDPEEARQALQRLDQQLKSLSNKQISSPKIKAA-DVKITRGPGPAEQETLEISGSFLTN 106
           E+DP++ARQALQ LDQQL+S S KQ+SSPK K   D+ + R       E  EIS + L N
Sbjct: 88  EVDPDKARQALQELDQQLQSFSKKQVSSPKKKVVQDMNVPR--SQMRGEMTEISETLLAN 145

Query: 107 TTVALLIFTILYNVLFYTVIKPSIDGP 133
           + V L IF+I YNVLFYTVIKPSID P
Sbjct: 146 SAVVLFIFSIFYNVLFYTVIKPSIDVP 172

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388505690|gb|AFK40911.1| unknown [Lotus japonicus]

 Score =  101 bits (252), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 54/115 (46%), Positives = 79/115 (68%), Gaps = 8/115 (6%)

Query: 27  NPSPSVVARAVENNNSQNS-KFEIDPEEARQALQRLDQQLKSLSNKQISSPKI--KAADV 83
           NPS S  +  + +   ++S ++EIDP++AR++L+ LDQQ++SLSN+Q+SSPK+  K +DV
Sbjct: 43  NPSSSFSSCCIVHAAKEDSEQYEIDPDKARESLKELDQQIQSLSNEQVSSPKVRVKVSDV 102

Query: 84  KITRG-----PGPAEQETLEISGSFLTNTTVALLIFTILYNVLFYTVIKPSIDGP 133
           K+           +  + ++IS SFL +    LL F+I YNVLFYTVIKPSIDGP
Sbjct: 103 KLAEDQVSGSGSGSGTDKIDISDSFLASLAGGLLFFSIFYNVLFYTVIKPSIDGP 157

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255544872|ref|XP_002513497.1| conserved hypothetical protein [Ricinus communis] gi|223547405|gb|EEF48900.1| conserved hypothetical protein [Ricinus communis]

 Score = 99.8 bits (247), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 53/101 (52%), Positives = 70/101 (69%), Gaps = 5/101 (4%)

Query: 32  VVARAVENNNSQNSKFEIDPEEARQALQRLDQQLKSLSNKQISSPKIKAADVKITRGPGP 91
            V RA+E ++ Q   +EID E+AR+ALQ+LDQQL+ LS KQ++ PK+K +DVKITR    
Sbjct: 49  CVVRALEKDSQQ---YEIDQEKAREALQKLDQQLQDLSKKQVTPPKVKVSDVKITR--DQ 103

Query: 92  AEQETLEISGSFLTNTTVALLIFTILYNVLFYTVIKPSIDG 132
             +E  E+SGSFL      L +FTILYN+L+ TVI PS D 
Sbjct: 104 TIEEVPEMSGSFLAFFAAGLFLFTILYNLLYITVIDPSGDA 144

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18379315|ref|NP_565278.1| uncharacterized protein [Arabidopsis thaliana] gi|20198054|gb|AAD21779.2| expressed protein [Arabidopsis thaliana] gi|51968650|dbj|BAD43017.1| unknown protein [Arabidopsis thaliana] gi|107738048|gb|ABF83621.1| At2g01870 [Arabidopsis thaliana] gi|330250416|gb|AEC05510.1| uncharacterized protein [Arabidopsis thaliana]

 Score = 87.4 bits (215), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/140 (37%), Positives = 86/140 (61%), Gaps = 16/140 (11%)

Query: 1   MLSLQSLSFLHNKPILSLERLNHYVNNPSPSVVARAVENNNSQNSKFEIDPEEARQALQR 60
           +L LQSL +  +  I+  ++  H +       + +A E  +S    F+ID ++AR+AL++
Sbjct: 4   VLGLQSLKWYTHGRIMETKKKRHLMR------IVQATEREDS----FQIDRDKAREALKQ 53

Query: 61  LDQQLKSLSNKQISSPKI---KAADVKITRGPGPAEQETLEISGSFLTNTTVALLIFTIL 117
           LDQQ++S ++++   P+I    ++DV  T       +E  EISGSFLT++   LL  T+ 
Sbjct: 54  LDQQIESQADEK---PRIINKTSSDVVRTNNDPIMFEEPPEISGSFLTSSAFVLLALTLF 110

Query: 118 YNVLFYTVIKPSIDGPDDIP 137
           YN+LF TVIKPS+DGP+ +P
Sbjct: 111 YNILFITVIKPSMDGPESVP 130

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21617897|gb|AAM66947.1| unknown [Arabidopsis thaliana]

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/108 (42%), Positives = 72/108 (66%), Gaps = 10/108 (9%)

Query: 33  VARAVENNNSQNSKFEIDPEEARQALQRLDQQLKSLSNKQISSPKI---KAADVKITRGP 89
           + +A E  +S    F+ID ++AR+AL++LDQQ++S ++++   P+I    ++DV  T   
Sbjct: 12  IVQATEREDS----FQIDRDKAREALKQLDQQIESQADEK---PRIINKTSSDVVRTNND 64

Query: 90  GPAEQETLEISGSFLTNTTVALLIFTILYNVLFYTVIKPSIDGPDDIP 137
               +E  EISGSFLT++   LL  T+ YN+LF TVIKPS+DGP+ +P
Sbjct: 65  PIMFEEPPEISGSFLTSSAFVLLALTLFYNILFITVIKPSMDGPESVP 112

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359478733|ref|XP_003632163.1| PREDICTED: uncharacterized protein LOC100854250 [Vitis vinifera] gi|297746306|emb|CBI16362.3| unnamed protein product [Vitis vinifera]

 Score = 77.0 bits (188), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/98 (50%), Positives = 71/98 (72%), Gaps = 5/98 (5%)

Query: 35  RAVENNNSQNSKFEIDPEEARQALQRLDQQLKSLSNKQISSPKIKAADVKITRGPGPAEQ 94
            AV+ ++ Q   FE+DP++AR+ALQ+LDQQL+SLS KQ + P+  A++  +        +
Sbjct: 52  HAVDKDSQQ---FEVDPDKAREALQKLDQQLQSLSQKQDTPPRKTASNQNLAGDQ--MRE 106

Query: 95  ETLEISGSFLTNTTVALLIFTILYNVLFYTVIKPSIDG 132
           E +E+SGSFL  + +AL++FTI YNVLF TVI+PSIDG
Sbjct: 107 EPVELSGSFLAYSALALVVFTIFYNVLFLTVIQPSIDG 144

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147784772|emb|CAN70700.1| hypothetical protein VITISV_008768 [Vitis vinifera]

 Score = 75.5 bits (184), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 48/98 (48%), Positives = 69/98 (70%), Gaps = 12/98 (12%)

Query: 35  RAVENNNSQNSKFEIDPEEARQALQRLDQQLKSLSNKQISSPKIKAADVKITRGPGPAEQ 94
            AV+ ++ Q   FE+DP++AR+ALQ+LDQQL+SLS KQ S+  +    ++         +
Sbjct: 52  HAVDKDSQQ---FEVDPDKAREALQKLDQQLQSLSQKQASNQNLAGDQMR---------E 99

Query: 95  ETLEISGSFLTNTTVALLIFTILYNVLFYTVIKPSIDG 132
           E +E+SGSFL  + +AL++FTI YNVLF TVI+PSIDG
Sbjct: 100 EPVELSGSFLAYSALALVVFTIFYNVLFLTVIQPSIDG 137

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	171
TAIR|locus:2059738	157	AT2G01870 "AT2G01870" [Arabido	0.742	0.808	0.313	5e-12

TAIR|locus:2059738 AT2G01870 "AT2G01870" [Arabidopsis thaliana (taxid:3702)]

 Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
 Identities = 43/137 (31%), Positives = 71/137 (51%)

Query:     1 MLSLQSLSFLHNKPILSLERLNHYVNNPSPSVVARAVENNNSQNSKFEIDPEEXXXXXXX 60
             +L LQSL +  +  I+  ++  H +       + +A E  +S    F+ID ++       
Sbjct:     4 VLGLQSLKWYTHGRIMETKKKRHLMR------IVQATEREDS----FQIDRDKAREALKQ 53

Query:    61 XXXXXKSLSNKQISSPKIKAADVKITRGPGPAEQETLEISGSFLTNTTVALLIFTILYNV 120
                  +S ++++       ++DV  T       +E  EISGSFLT++   LL  T+ YN+
Sbjct:    54 LDQQIESQADEKPRIINKTSSDVVRTNNDPIMFEEPPEISGSFLTSSAFVLLALTLFYNI 113

Query:   121 LFYTVIKPSIDGPDDIP 137
             LF TVIKPS+DGP+ +P
Sbjct:   114 LFITVIKPSMDGPESVP 130


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.310   0.128   0.350    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      171       159   0.00091  106 3  11 23  0.45    32
                                                     30  0.43    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  498 (53 KB)
  Total size of DFA:  111 KB (2076 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  17.12u 0.19s 17.31t   Elapsed:  00:00:01
  Total cpu time:  17.12u 0.19s 17.31t   Elapsed:  00:00:01
  Start:  Thu May  9 23:11:41 2013   End:  Thu May  9 23:11:42 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0000023 "maltose metabolic process" evidence=RCA

GO:0019252 "starch biosynthetic process" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00