Citrus Sinensis ID: 031027

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------
Protein Sequence
MKQVSLQILSFAIKFAGESTPDLSNEAAGIFIWCLTQSADCYKHWDKLYEANLEASVKVLKKLSEEWKEHSAKLSPLDPFRATLKSFRQKNEKGIGGTADAARQSLLRNADKYCKLVSGKLSSSHGCLKSVALAVIAIAVGAAFMSPNVESLDWEKISVFFTSQPSI
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcHHcccccHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHccccc
Coil and Loop (DISEMBL)
MKQVSLQILSFAIKFagestpdlsneaAGIFIWCLTQSADCYKHWDKLYEANLEASVKVLKKLSEEWKEhsaklspldpfRATLKSFRQKnekgiggtADAARQSLLRNADKYCKLVSgklssshgclKSVALAVIAIAVGAafmspnvesldweKISVFFTSQPSI
Flexible Loop (DISEMBL)
MKQVSLQILSFAIKFAGESTPDLSNEAAGIFIWCLTQSADCYKHWDKLYEANLEASVKVLKKLSEEWKehsaklspldpfrATLKSFrqknekgiggtADAARQSLLRNADKYCKLVSGKLSSSHGCLKSVALAVIAIAVGAAFMSPNVESLDWEKISVFFTSQPSI
Low Complexity Region (SEG)
MKQVSLQILSFAIKFAGESTPDLSNEAAGIFIWCLTQSADCYKHWDKLYEANLEASVKVLKKLSEEWKEHSAKLSPLDPFRATLKSFRQKNEKGIGGTADAARQSLLRNADKYCKLVSGKLSSSHGCLKSvalaviaiavgaaFMSPNVESLDWEKISVFFTSQPSI
Disordered region (IsUnstruct)
*****LQILSFAIKFAGESTPDLSNEAAGIFIWCLTQSADCYKHWDKLYEANLEASVKVLKKLS*****************************************LLRNADKYCKLVSGKLSSSHGCLKSVALAVIAIAVGAAFMSPNVESLDWEKISVFF******
Disordered Region (DISOPRED)
****SLQILSFAIKFAG****DLSNEAAGIFIWCLTQSADCYKHWDKLYEANLEASVKVLKKLSEEW****************LKSFRQ****************LLRNADKYCKLVSGKLSSSHGCLKSVALAVIAIAVGAAFMSPNVESLDWEKISVFFTSQP**
Disordered Region (DISEMBL)
MKQVSLQILSFAIKFAGESTPDLSNEAAGIFIWCLTQSADCYKHWDKLYEANLEASVKVLKKLSE********LSPLDPFRATLKSFRQKNEKGIGGTADAARQSLLRNADKYCKLVSGKLSSSHGCLKSVALAVIAIAVGAAFMSPNVESLDWEKISVFFTSQPSI
Disordered Region (DISPRO)
MKQVSLQILSFAIKFAGESTPDLSNEAAGIFIWCLTQSADCYKHWDKLYEANLEASVKVLKKLSEEWKEHSAKLSPLDPFRATLKSFRQKNEKGIGGTADAARQSLLRNADKYCKLVSGKLSSSHGCLKSVALAVIAIAVGAAFMSPNVESLDWEKISVFFTS****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MKQVSLQILSFAIKFAGESTPDLSNEAAGIFIWCLTQSADCYKHWDKLYEANLEASVKVLKKLSEEWKEHSAKLSPLDPFRATLKSFRQKNEKGIGGTADAARQSLLRNADKYCKLVSGKLSSSHGCLKSVALAVIAIAVGAAFMSPNVESLDWEKISVFFTSQPSI
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	167
224099505	567	predicted protein [Populus trichocarpa]	0.982	0.289	0.664	2e-54
224111486	594	predicted protein [Populus trichocarpa]	0.982	0.276	0.682	4e-54
356512298	551	PREDICTED: uncharacterized protein LOC10	0.982	0.297	0.587	4e-53
356512296	597	PREDICTED: uncharacterized protein LOC10	0.982	0.274	0.587	5e-53
255573742	589	conserved hypothetical protein [Ricinus	0.976	0.276	0.670	1e-52
449449042	591	PREDICTED: uncharacterized protein LOC10	0.964	0.272	0.602	5e-52
356525070	553	PREDICTED: uncharacterized protein LOC10	0.964	0.291	0.586	6e-51
356525068	599	PREDICTED: uncharacterized protein LOC10	0.964	0.268	0.586	7e-51
225424297	594	PREDICTED: uncharacterized protein LOC10	0.940	0.264	0.613	3e-46
225424299	548	PREDICTED: uncharacterized protein LOC10	0.940	0.286	0.613	3e-46

>gi|224099505|ref|XP_002311510.1| predicted protein [Populus trichocarpa] gi|222851330|gb|EEE88877.1| predicted protein [Populus trichocarpa]

 Score =  217 bits (552), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 109/164 (66%), Positives = 136/164 (82%)

Query: 1   MKQVSLQILSFAIKFAGESTPDLSNEAAGIFIWCLTQSADCYKHWDKLYEANLEASVKVL 60
           MKQVS QILSFA+K AGES P+LS EAAGI IWCLT++ADCYK WDK+Y+ NLE+SV +L
Sbjct: 401 MKQVSQQILSFALKAAGESIPELSKEAAGISIWCLTENADCYKQWDKVYQDNLESSVAIL 460

Query: 61  KKLSEEWKEHSAKLSPLDPFRATLKSFRQKNEKGIGGTADAARQSLLRNADKYCKLVSGK 120
           K+L EEWKE S K++PLDP R T+K+FRQKNEKG+   ADAARQ+L R+ADKY K +SGK
Sbjct: 461 KRLMEEWKELSVKMAPLDPLRETIKNFRQKNEKGMETEADAARQALFRDADKYSKALSGK 520

Query: 121 LSSSHGCLKSVALAVIAIAVGAAFMSPNVESLDWEKISVFFTSQ 164
           LS  HGCLK +A+A++A+A GAA MS N+ES DW+++ VF +SQ
Sbjct: 521 LSHGHGCLKGMAVAIVALAAGAAVMSSNLESWDWKELPVFISSQ 564

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224111486|ref|XP_002315874.1| predicted protein [Populus trichocarpa] gi|222864914|gb|EEF02045.1| predicted protein [Populus trichocarpa]

 Score =  215 bits (548), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 112/164 (68%), Positives = 134/164 (81%)

Query: 1   MKQVSLQILSFAIKFAGESTPDLSNEAAGIFIWCLTQSADCYKHWDKLYEANLEASVKVL 60
           MKQVS QILSFA+K AGES P+LS EAAGI IWCLTQ+ADCYK WDK+Y+ NLEASV VL
Sbjct: 428 MKQVSQQILSFALKAAGESIPELSKEAAGISIWCLTQNADCYKQWDKVYQDNLEASVAVL 487

Query: 61  KKLSEEWKEHSAKLSPLDPFRATLKSFRQKNEKGIGGTADAARQSLLRNADKYCKLVSGK 120
           K+L EEWKE S KL+PLDP R T+K++RQKNEKG+   ADA RQ+L R ADK+CK +S K
Sbjct: 488 KRLLEEWKELSVKLAPLDPMRETIKNYRQKNEKGMEPEADATRQALFREADKHCKTLSSK 547

Query: 121 LSSSHGCLKSVALAVIAIAVGAAFMSPNVESLDWEKISVFFTSQ 164
           LS  HGCLK +A+AVIA+A GAA MS N+ES DW+++ VF +SQ
Sbjct: 548 LSHGHGCLKGMAVAVIALAAGAAIMSSNMESWDWKELPVFISSQ 591

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356512298|ref|XP_003524857.1| PREDICTED: uncharacterized protein LOC100777797 isoform 2 [Glycine max]

 Score =  212 bits (540), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 97/165 (58%), Positives = 130/165 (78%), Gaps = 1/165 (0%)

Query: 1   MKQVSLQILSFAIKFAGESTPDLSNEAAGIFIWCLTQSADCYKHWDKLYEANLEASVKVL 60
           MKQV+LQI SFAIK AGE+ P+LS EAAGIFIWCL+Q+ +CYK W+K+Y+ N+EASV VL
Sbjct: 386 MKQVALQIFSFAIKAAGENNPELSKEAAGIFIWCLSQNTECYKQWEKVYQDNIEASVSVL 445

Query: 61  KKLSEEWKEHSAKLSPLDPFRATLKSFRQKNEKGIGGTADAARQSLLRNADKYCKLVSGK 120
           +KLS++WKE S KLSP DP R T+K+ +QKNEK +    DAAR +  ++ADKYCK++ G+
Sbjct: 446 EKLSDDWKELSTKLSPHDPLRDTIKNLKQKNEKVLDSETDAARHAHFKDADKYCKIILGR 505

Query: 121 LSSSHGCLKSVALAVIAIAVGAAF-MSPNVESLDWEKISVFFTSQ 164
           +S SHGC+  +   V+A+AVGAA  +SPN+ESLD++K+S  F  Q
Sbjct: 506 VSRSHGCMTCLTFTVLALAVGAAVSLSPNLESLDFKKLSELFNVQ 550

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356512296|ref|XP_003524856.1| PREDICTED: uncharacterized protein LOC100777797 isoform 1 [Glycine max]

 Score =  212 bits (539), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 97/165 (58%), Positives = 130/165 (78%), Gaps = 1/165 (0%)

Query: 1   MKQVSLQILSFAIKFAGESTPDLSNEAAGIFIWCLTQSADCYKHWDKLYEANLEASVKVL 60
           MKQV+LQI SFAIK AGE+ P+LS EAAGIFIWCL+Q+ +CYK W+K+Y+ N+EASV VL
Sbjct: 432 MKQVALQIFSFAIKAAGENNPELSKEAAGIFIWCLSQNTECYKQWEKVYQDNIEASVSVL 491

Query: 61  KKLSEEWKEHSAKLSPLDPFRATLKSFRQKNEKGIGGTADAARQSLLRNADKYCKLVSGK 120
           +KLS++WKE S KLSP DP R T+K+ +QKNEK +    DAAR +  ++ADKYCK++ G+
Sbjct: 492 EKLSDDWKELSTKLSPHDPLRDTIKNLKQKNEKVLDSETDAARHAHFKDADKYCKIILGR 551

Query: 121 LSSSHGCLKSVALAVIAIAVGAAF-MSPNVESLDWEKISVFFTSQ 164
           +S SHGC+  +   V+A+AVGAA  +SPN+ESLD++K+S  F  Q
Sbjct: 552 VSRSHGCMTCLTFTVLALAVGAAVSLSPNLESLDFKKLSELFNVQ 596

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255573742|ref|XP_002527792.1| conserved hypothetical protein [Ricinus communis] gi|223532827|gb|EEF34602.1| conserved hypothetical protein [Ricinus communis]

 Score =  211 bits (536), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 110/164 (67%), Positives = 133/164 (81%), Gaps = 1/164 (0%)

Query: 1   MKQVSLQILSFAIKFAGESTPDLSNEAAGIFIWCLTQSADCYKHWDKLYEANLEASVKVL 60
           MKQVSLQIL+FA K AGES P+LS EAAGI IWCLTQ+A+CYKHWDK+Y+ N EAS+ +L
Sbjct: 424 MKQVSLQILNFAFKAAGESNPELSKEAAGICIWCLTQNAECYKHWDKIYQENPEASIAIL 483

Query: 61  KKLSEEWKEHSAKLSPLDPFRATLKSFRQKNEKGIGGTADAARQSLLRNADKYCKLVSGK 120
           KKL EEWKE SAKLSPLDP R TLKSFR+KNEK +    DAA+ +LLR+ADKYCK + GK
Sbjct: 484 KKLLEEWKELSAKLSPLDPLRETLKSFRRKNEKAMASAEDAAKHALLRDADKYCKAILGK 543

Query: 121 LSSSHGCLKSVALAVIAIAVGAAFMSPNVESLDWEKISVFFTSQ 164
           LS    C K + +AV+A+AVGAA +SPN+ES DW+K++VF  SQ
Sbjct: 544 LSRGRFCTK-MTVAVVALAVGAAIISPNMESWDWKKLAVFVNSQ 586

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449449042|ref|XP_004142274.1| PREDICTED: uncharacterized protein LOC101205264 [Cucumis sativus] gi|449510363|ref|XP_004163644.1| PREDICTED: uncharacterized protein LOC101224709 [Cucumis sativus]

 Score =  208 bits (530), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 97/161 (60%), Positives = 119/161 (73%)

Query: 1   MKQVSLQILSFAIKFAGESTPDLSNEAAGIFIWCLTQSADCYKHWDKLYEANLEASVKVL 60
           MKQVS QI SFA K AGES  +LS EA  IFIWCLT +ADCYK WDK+Y+ NLEASV VL
Sbjct: 426 MKQVSQQIFSFAAKAAGESVSELSGEATNIFIWCLTNNADCYKQWDKIYQDNLEASVSVL 485

Query: 61  KKLSEEWKEHSAKLSPLDPFRATLKSFRQKNEKGIGGTADAARQSLLRNADKYCKLVSGK 120
           KK+S++WK +S KL+P D  R TLKSFR KNEK +    +   QS+ + ADKY K +  +
Sbjct: 486 KKISDDWKTYSLKLAPFDGLRETLKSFRIKNEKALASEEEDGHQSIYKEADKYAKAILNR 545

Query: 121 LSSSHGCLKSVALAVIAIAVGAAFMSPNVESLDWEKISVFF 161
           +S  HGCLKS+A  VIA+ +GAA MSPN+ESLDWEK++ F 
Sbjct: 546 VSRGHGCLKSMAFIVIALGIGAAVMSPNIESLDWEKLTAFI 586

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356525070|ref|XP_003531150.1| PREDICTED: uncharacterized protein LOC100795409 isoform 2 [Glycine max]

 Score =  205 bits (521), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 95/162 (58%), Positives = 126/162 (77%), Gaps = 1/162 (0%)

Query: 1   MKQVSLQILSFAIKFAGESTPDLSNEAAGIFIWCLTQSADCYKHWDKLYEANLEASVKVL 60
           MKQV+LQI SFAIK AGE+ P+LS EAAGIFIWCL+Q+ +CYK W+ +Y+ N+EAS  VL
Sbjct: 388 MKQVALQIFSFAIKAAGENNPELSKEAAGIFIWCLSQNTECYKQWENVYQDNIEASASVL 447

Query: 61  KKLSEEWKEHSAKLSPLDPFRATLKSFRQKNEKGIGGTADAARQSLLRNADKYCKLVSGK 120
           KKLS++WKE S KLSP D  R T+K+F+QKNEK +    DAAR +  ++ADKYCK++ G+
Sbjct: 448 KKLSDDWKELSTKLSPHDHLRDTIKNFKQKNEKVLDSETDAARHAHFKDADKYCKIILGR 507

Query: 121 LSSSHGCLKSVALAVIAIAVGAAF-MSPNVESLDWEKISVFF 161
           +S SHGC   +   V+A+AVGAA  +SPN+ESLD++K+S  F
Sbjct: 508 VSRSHGCTTCLTFTVLALAVGAAVSLSPNLESLDFKKLSELF 549

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356525068|ref|XP_003531149.1| PREDICTED: uncharacterized protein LOC100795409 isoform 1 [Glycine max]

 Score =  204 bits (520), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 95/162 (58%), Positives = 126/162 (77%), Gaps = 1/162 (0%)

Query: 1   MKQVSLQILSFAIKFAGESTPDLSNEAAGIFIWCLTQSADCYKHWDKLYEANLEASVKVL 60
           MKQV+LQI SFAIK AGE+ P+LS EAAGIFIWCL+Q+ +CYK W+ +Y+ N+EAS  VL
Sbjct: 434 MKQVALQIFSFAIKAAGENNPELSKEAAGIFIWCLSQNTECYKQWENVYQDNIEASASVL 493

Query: 61  KKLSEEWKEHSAKLSPLDPFRATLKSFRQKNEKGIGGTADAARQSLLRNADKYCKLVSGK 120
           KKLS++WKE S KLSP D  R T+K+F+QKNEK +    DAAR +  ++ADKYCK++ G+
Sbjct: 494 KKLSDDWKELSTKLSPHDHLRDTIKNFKQKNEKVLDSETDAARHAHFKDADKYCKIILGR 553

Query: 121 LSSSHGCLKSVALAVIAIAVGAAF-MSPNVESLDWEKISVFF 161
           +S SHGC   +   V+A+AVGAA  +SPN+ESLD++K+S  F
Sbjct: 554 VSRSHGCTTCLTFTVLALAVGAAVSLSPNLESLDFKKLSELF 595

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225424297|ref|XP_002284658.1| PREDICTED: uncharacterized protein LOC100264607 isoform 1 [Vitis vinifera]

 Score =  189 bits (480), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 97/158 (61%), Positives = 121/158 (76%), Gaps = 1/158 (0%)

Query: 1   MKQVSLQILSFAIKFAGESTPDLSNEAAGIFIWCLTQSADCYKHWDKLYEANLEASVKVL 60
           MKQ S QIL+F IK AGES P+LSNE + IFIWCLTQ+ DCYK WD++Y  NLEASV +L
Sbjct: 427 MKQASQQILTFTIKAAGESIPELSNETSSIFIWCLTQNPDCYKQWDRIYLDNLEASVAIL 486

Query: 61  KKLSEEWKEHSAKLSPLDPFRATLKSFRQKNEKGIGGTADAARQSLLRNADKYCKLVSGK 120
           +KL+E+ KE S K S LDP R TLKSFR KNEK + G  DAA Q+LL++ADKYCK + G+
Sbjct: 487 RKLTEQLKELSLKQSSLDPLRETLKSFRHKNEKELAGGEDAAHQALLKDADKYCKGILGR 546

Query: 121 LSSSHGCLKSVAL-AVIAIAVGAAFMSPNVESLDWEKI 157
           +S  HGC+KS+    + A+AVGAA MSPN+ES D +K+
Sbjct: 547 VSRGHGCMKSLTFAVIAAVAVGAALMSPNMESWDLKKL 584

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225424299|ref|XP_002284660.1| PREDICTED: uncharacterized protein LOC100264607 isoform 2 [Vitis vinifera]

 Score =  189 bits (480), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 97/158 (61%), Positives = 121/158 (76%), Gaps = 1/158 (0%)

Query: 1   MKQVSLQILSFAIKFAGESTPDLSNEAAGIFIWCLTQSADCYKHWDKLYEANLEASVKVL 60
           MKQ S QIL+F IK AGES P+LSNE + IFIWCLTQ+ DCYK WD++Y  NLEASV +L
Sbjct: 381 MKQASQQILTFTIKAAGESIPELSNETSSIFIWCLTQNPDCYKQWDRIYLDNLEASVAIL 440

Query: 61  KKLSEEWKEHSAKLSPLDPFRATLKSFRQKNEKGIGGTADAARQSLLRNADKYCKLVSGK 120
           +KL+E+ KE S K S LDP R TLKSFR KNEK + G  DAA Q+LL++ADKYCK + G+
Sbjct: 441 RKLTEQLKELSLKQSSLDPLRETLKSFRHKNEKELAGGEDAAHQALLKDADKYCKGILGR 500

Query: 121 LSSSHGCLKSVAL-AVIAIAVGAAFMSPNVESLDWEKI 157
           +S  HGC+KS+    + A+AVGAA MSPN+ES D +K+
Sbjct: 501 VSRGHGCMKSLTFAVIAAVAVGAALMSPNMESWDLKKL 538

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	167
TAIR|locus:2013955	610	AT1G70770 "AT1G70770" [Arabido	0.760	0.208	0.586	6.9e-33
TAIR|locus:2081566	443	AT3G11880 "AT3G11880" [Arabido	0.868	0.327	0.4	7.4e-21

TAIR|locus:2013955 AT1G70770 "AT1G70770" [Arabidopsis thaliana (taxid:3702)]

 Score = 364 (133.2 bits), Expect = 6.9e-33, P = 6.9e-33
 Identities = 78/133 (58%), Positives = 90/133 (67%)

Query:     1 MKQVSLQILSFAIKFAGESTPDLSNEAAGIFIWCLTQSADCYKHWDKLYEANLEASVKVL 60
             MKQV+ QI +FA+K AGE  P L+ EA  I IW +TQ+ DC KHWD LY+ NLEASV VL
Sbjct:   424 MKQVTQQIFTFALKLAGEGNPVLAKEATAIAIWSVTQNFDCCKHWDNLYKENLEASVAVL 483

Query:    61 KKLSEEWKEHSAKLS--PLDPF--RATLKSFRQKNEKGIGGTADAARQSLLRNADKYCKL 116
             KKL EEWKEHS KLS  P D      T+KSFR KNE+ I  T   A  SL + ADK CK 
Sbjct:   484 KKLVEEWKEHSVKLSSSPNDALTLNRTMKSFRLKNEEVI--TEGGANASLYKEADKSCKT 541

Query:   117 VSGKLSSSHGCLK 129
             +SG+LS   GCLK
Sbjct:   542 ISGRLSRGSGCLK 554

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006007 "glucose catabolic process" evidence=RCA

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

TAIR|locus:2081566 AT3G11880 "AT3G11880" [Arabidopsis thaliana (taxid:3702)]

 Score = 250 (93.1 bits), Expect = 7.4e-21, P = 7.4e-21
 Identities = 62/155 (40%), Positives = 83/155 (53%)

Query:     1 MKQVSLQILSFAIKFAGESTPDLSNEAAGIFIWCLTQSADCYKHWDKLYEANLEASVKVL 60
             MKQV+ QI  +++  AG     L+ EA  I +W LT++ DC K W+KLY  N EASV VL
Sbjct:   293 MKQVTQQIFHYSLIIAGRRNLVLAKEATAIAVWSLTENVDCCKQWEKLYWENKEASVAVL 352

Query:    61 KKLSEEWKEHSAKL--SPLDPF--RATLKSFRQKNEKGI--GGTADAARQSLLRNADKYC 114
             KKL +E  + S KL  SP   F    T++S R KNEK I  GGT      S  + ADK C
Sbjct:   353 KKLVDERGDISIKLASSPSHKFTLNQTMESIRLKNEKAITEGGTIG----SRYKEADKSC 408

Query:   115 KLVSGKLSSSHGCLKSXXXXXXXXXXXXXFMSPNV 149
             K++SG+    + CLK               ++ N+
Sbjct:   409 KVMSGRFFPENACLKGTAIITAVVLAAVAVLASNL 443


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.129   0.382    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      167       154   0.00088  105 3  11 22  0.37    32
                                                     30  0.41    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  610 (65 KB)
  Total size of DFA:  158 KB (2093 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.46u 0.08s 14.54t   Elapsed:  00:00:02
  Total cpu time:  14.46u 0.08s 14.54t   Elapsed:  00:00:02
  Start:  Fri May 10 08:20:46 2013   End:  Fri May 10 08:20:48 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0031348 "negative regulation of defense response" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pm.C_LG_VIII0567 hypothetical protein (568 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	167
KOG4467	557	consensus Uncharacterized conserved protein [Funct	100.0
PF10151	469	DUF2359: Uncharacterised conserved protein (DUF235	100.0
KOG4467	557	consensus Uncharacterized conserved protein [Funct	98.67

>KOG4467 consensus Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=4e-47  Score=342.12  Aligned_cols=162  Identities=49%  Similarity=0.754  Sum_probs=151.9

Q ss_pred             ChHHHHHHHHHHHHHhccCChhhhHHHHHHHHHHhccCccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhcccCCCCch-
Q 031027            1 MKQVSLQILSFAIKFAGESTPDLSNEAAGIFIWCLTQSADCYKHWDKLYEANLEASVKVLKKLSEEWKEHSAKLSPLDP-   79 (167)
Q Consensus         1 mKqv~qQi~~~slk~age~np~L~kEa~~i~iwCLtqn~~c~k~W~~LY~enL~aSv~lLk~L~~~Wke~s~Kls~~~~-   79 (167)
                      ||||+||||+|++|.+||+||.|+||+++|+||..|||.||+++|+|+|++||++||++|++|++||||+|.||.|.++ 
T Consensus       378 mkqVtqqiftfAlk~age~np~Lakeaaai~iW~~tqn~Dcckhw~nly~~nL~aSVavLkkll~ewkE~svkL~p~~~l  457 (557)
T KOG4467|consen  378 MKQVTQQIFTFALKHAGETNPFLAKEAAAILIWFGTQNVDCCKHWSNLYQINLPASVAVLKKLLGEWKELSVKLLPAETL  457 (557)
T ss_pred             HHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhccCccHHHHHHHHHHhhchhHHHHHHHHHHHHHhcccccCchhhh
Confidence            8999999999999999999999999999999999999999999999999999999999999999999999999999887 


Q ss_pred             -HHHHHHHHHhhchhcccCCcchhhhhhHHHHHHHhHHHhhhhcCCCcchhHHHHHHHHHHH----hhhhcCCC------
Q 031027           80 -FRATLKSFRQKNEKGIGGTADAARQSLLRNADKYCKLVSGKLSSSHGCLKSVALAVIAIAV----GAAFMSPN------  148 (167)
Q Consensus        80 -L~eTvkSFr~kNe~al~~g~d~~~~~~~k~aDk~CK~ilgrls~g~~clk~~~~~~~~~a~----~a~~ls~n------  148 (167)
                       |+.||+|||++|||++++|  +.++++||+|||+||+|.||+|+| ||+|+++++++-+|+    +|+|+|.|      
T Consensus       458 tlN~tmkslr~kneEalteg--g~~~slyk~adk~Ck~i~G~ls~g-gCmKt~astav~laa~g~a~aavls~npea~a~  534 (557)
T KOG4467|consen  458 TLNVTMKSLRHKNEEALTEG--GVSQSLYKHADKACKVIAGELSWG-GCMKTQASTAVHLAALGLADAAVLSLNPEALAL  534 (557)
T ss_pred             HHhhhHHHHHHHHHHHHHhc--ccchhHHHHHHHHHHhhcCccccc-chHHHHHHHHHHHHHHHHhHHHHHhCCHHHHHH
Confidence             6999999999999999999  899999999999999999999999 999998887765543    55788888      


Q ss_pred             ----CCccchHHHHHHhhcCC
Q 031027          149 ----VESLDWEKISVFFTSQP  165 (167)
Q Consensus       149 ----~e~~~~~kl~~~~~~~~  165 (167)
                          +|++|.+|+++.++..+
T Consensus       535 lknlv~sl~ink~te~v~tal  555 (557)
T KOG4467|consen  535 LKNLVESLDINKFTETVMTAL  555 (557)
T ss_pred             HHHHHHhhhhhHHHHHHHHHh
Confidence                67889999999988765

>PF10151 DUF2359: Uncharacterised conserved protein (DUF2359); InterPro: IPR019308 This is a 450 amino acid region of a family of proteins conserved from insects to humans

Probab=100.00  E-value=2.4e-40  Score=300.82  Aligned_cols=133  Identities=40%  Similarity=0.681  Sum_probs=116.4

Q ss_pred             HHHHHHHHH-HhccCChhhhHHHHHHHHHHhccCccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhcccCCCCchHHHHH
Q 031027            6 LQILSFAIK-FAGESTPDLSNEAAGIFIWCLTQSADCYKHWDKLYEANLEASVKVLKKLSEEWKEHSAKLSPLDPFRATL   84 (167)
Q Consensus         6 qQi~~~slk-~age~np~L~kEa~~i~iwCLtqn~~c~k~W~~LY~enL~aSv~lLk~L~~~Wke~s~Kls~~~~L~eTv   84 (167)
                      +++|+.-++ +.++.|++|++|+++++|||||+|||||+|||++|++|++||++||+||+++|+++|+|++  ++|+|||
T Consensus       147 ~~~f~~~l~~~~~~~~~~~~~E~~~~li~CLt~d~~c~~~Wr~lY~knl~~S~llL~~l~~~W~~~s~KL~--k~l~~Tl  224 (469)
T PF10151_consen  147 HTYFPSFLSKATPECPPELKKELISILIWCLTQDPDCFKVWRQLYKKNLKQSVLLLKHLDDEWKESSKKLS--KSLKETL  224 (469)
T ss_pred             HHHHHHHHHHhcccCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHhHHHHHHHHHHHHHhHHhhhHHHH--HHHHHHH
Confidence            455555444 4456777999999999999999999999999999999999999999999999999999997  5999999


Q ss_pred             HHHHhhchhcccCCcchhhhhhHHHHHHHhHHHhhhhcCCCcchhHHHHHHHHHHHhh
Q 031027           85 KSFRQKNEKGIGGTADAARQSLLRNADKYCKLVSGKLSSSHGCLKSVALAVIAIAVGA  142 (167)
Q Consensus        85 kSFr~kNe~al~~g~d~~~~~~~k~aDk~CK~ilgrls~g~~clk~~~~~~~~~a~~a  142 (167)
                      +|||++|||++++|  +++.+++++||++||+|++||++++.+|+..+++++++++|+
T Consensus       225 ~sfr~~Nee~~~k~--~~~~~~lk~~dk~Ck~il~K~~~~~c~w~~l~llllvliaG~  280 (469)
T PF10151_consen  225 KSFRLKNEELLKKG--KAKDESLKECDKACKVILGKMSGSSCPWTRLLLLLLVLIAGF  280 (469)
T ss_pred             HHHHHhHHHHHhcc--ccchHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHH
Confidence            99999999999998  789999999999999999999888766765555555556554

The function is not known.

>KOG4467 consensus Uncharacterized conserved protein [Function unknown]

Probab=98.67  E-value=1.5e-08  Score=92.98  Aligned_cols=109  Identities=10%  Similarity=0.004  Sum_probs=98.2

Q ss_pred             CChhhhHHHHHHHHHHhccCccHHHHHHHHHHHhHHHH-----HHHHHHHHHHHHhhcccCCCCchHHHHHHHHHhhchh
Q 031027           19 STPDLSNEAAGIFIWCLTQSADCYKHWDKLYEANLEAS-----VKVLKKLSEEWKEHSAKLSPLDPFRATLKSFRQKNEK   93 (167)
Q Consensus        19 ~np~L~kEa~~i~iwCLtqn~~c~k~W~~LY~enL~aS-----v~lLk~L~~~Wke~s~Kls~~~~L~eTvkSFr~kNe~   93 (167)
                      .-+|+.+|....++.|++.|+.+-+.|++.|++|+.||     |+++.+|...|++.|.++.  .+|.++.+|.|.+|++
T Consensus       180 rPiEalgafvlw~~dCil~Dla~qqgg~kggkKg~qQs~Sksqvaifvalamvlr~kPdalt--n~LptlrenpKyqgQd  257 (557)
T KOG4467|consen  180 RPIEALGAFVLWLTDCILVDLASQQGGRKGGKKGLQQSSSKSQVAIFVALAMVLRQKPDALT--NSLPTLRENPKYQGQD  257 (557)
T ss_pred             CCHHHHHHHHHHHHHHHhccHHHHhhhhhhcccccccccchhHHHHHHHHHHHHHhccHHHH--HhhHHHHhCccccCcc
Confidence            45789999999999999999999999999999999998     4999999999999999997  7899999999999999


Q ss_pred             cc----cCCcchhhhhhHHHHHHHhHHHhhhhcCCCcchhH
Q 031027           94 GI----GGTADAARQSLLRNADKYCKLVSGKLSSSHGCLKS  130 (167)
Q Consensus        94 al----~~g~d~~~~~~~k~aDk~CK~ilgrls~g~~clk~  130 (167)
                      .+    ..+. .++|-+|..||-+|+..|...-+.+.|.--
T Consensus       258 kLpvtvwmma-qasQgDi~vglyswahnLlpVvg~k~cnPq  297 (557)
T KOG4467|consen  258 KLPVTVWMMA-QASQGDIVVGLYSWAHNLLPVVGPKSCNPQ  297 (557)
T ss_pred             cchHHHHHhh-ccccCCeeeeehhhhcccccccCCCCCCch
Confidence            88    4441 455669999999999999999999988654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	167
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.6 bits (94), Expect = 1e-04
 Identities = 20/88 (22%), Positives = 32/88 (36%), Gaps = 20/88 (22%)

Query: 5   SLQILSFAIKFAGESTPDLSNEAAGIF------IWCLTQSA----DCYKH--WDKLYEAN 52
              +L    K+      DL  E           I    +      D +KH   DKL    
Sbjct: 303 VKSLLL---KYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTI- 358

Query: 53  LEASVKVLKKLSEEWKEHSAKLS--PLD 78
           +E+S+ VL+    E+++   +LS  P  
Sbjct: 359 IESSLNVLE--PAEYRKMFDRLSVFPPS 384

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00