Citrus Sinensis ID: 032814

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130---
Protein Sequence
MTTVETQTAMSQSDKPKNVSTKSSKAQTPSPFKRWGRKHPFVRYGLPMISLTVFGAIGLGHLLQGSKDIAKVKDDQEWEIIEARKALSRTGPVDAYKPKNISLEEELKALQEKVDINNYEYKRIPRPNEGKSG
Secondary Structure (PSIPRED)
ccHHHHHHccccccccccccccccccccccHHHHHccccccEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccEEEEccccccccccccccccccccccccHHHcccccccHHHcccHHHHHHHHHHHHHHHHHHcccHHHHcccHHHHHHHHHHHHHcccccHHHcccccccHHHHHHHHHHHcccccccccccccccccccc
Coil and Loop (DISEMBL)
MTTVETqtamsqsdkpknvstksskaqtpspfkrwgrkhpfvryglpmislTVFGAIGLGHLLQGSKDIAKVKDDQEWEIIEARKALsrtgpvdaykpknISLEEELKALQEKvdinnyeykriprpnegksg
Flexible Loop (DISEMBL)
mttvetqtamsqsdkpknvstksskaqtpspfkrwgrkHPFVRYGLPMISLTVFGAIGLGHLLQGSKDIAKVKDDQEWEIIEarkalsrtgpvdaykpknisLEEELKALqekvdinnyeykriprpnegksg
Low Complexity Region (SEG)
MTTVETQTAMSQSDKPKNVSTKSSKAQTPSPFKRWGRKHPFVRYGLPMISLTVFGAIGLGHLLQGSKDIAKVKDDQEWEIIEARKALSRTGPVDAYKPKNISLEEELKALQEKVDINNYEYKRIPRPNEGKSG
Disordered region (IsUnstruct)
*********************************RWGRKHPFVRYGLPMISLTVFGAIGLGHLLQGSKDIAKVKDDQEWEIIEARKAL****************************I*****************
Disordered Region (DISOPRED)
************************************RKHPFVRYGLPMISLTVFGAIGLGHLLQGSKDIAKVK*****************************LEEELKALQEKVDINNYEYK***********
Disordered Region (DISEMBL)
*******************************FKRWGRKHPFVRYGLPMISLTVFGAIGLGHLLQGSKDIAKVKDDQEWEIIEARKALSRTGPVDAYKPKNISLEEELKALQEKVDINNYEYKRIPRPNEGKSG
Disordered Region (DISPRO)
*******************************FKRWGRKHPFVRYGLPMISLTVFGAIGLGHLLQGSKDIAKVKDDQEWEIIEARKALSRTGPVDAYKPKNISLEEELKALQEKVDINNYEYKRIPR*******
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTTVETQTAMSQSDKPKNVSTKSSKAQTPSPFKRWGRKHPFVRYGLPMISLTVFGAIGLGHLLQGSKDIAKVKDDQEWEIIEARKALSRTGPVDAYKPKxxxxxxxxxxxxxxxxxxxxxYKRIPRPNEGKSG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	133
449449368	131	PREDICTED: uncharacterized protein LOC10	0.954	0.969	0.742	2e-51
2244771	1662	kinesin like protein [Arabidopsis thalia	1.0	0.080	0.716	8e-50
22328612	134	uncharacterized protein [Arabidopsis tha	0.992	0.985	0.721	4e-49
255587118	113	conserved hypothetical protein [Ricinus	0.781	0.920	0.875	4e-49
297800850	134	hypothetical protein ARALYDRAFT_355402 [	0.992	0.985	0.714	2e-48
224109776	130	predicted protein [Populus trichocarpa]	0.977	1.0	0.706	4e-46
388515895	116	unknown [Lotus japonicus]	0.834	0.956	0.767	9e-45
356576229	121	PREDICTED: uncharacterized protein LOC10	0.789	0.867	0.8	7e-44
358248068	121	uncharacterized protein LOC100814113 [Gl	0.774	0.851	0.786	9e-43
357112744	120	PREDICTED: uncharacterized protein LOC10	0.796	0.883	0.738	3e-42

>gi|449449368|ref|XP_004142437.1| PREDICTED: uncharacterized protein LOC101208712 isoform 1 [Cucumis sativus] gi|449449370|ref|XP_004142438.1| PREDICTED: uncharacterized protein LOC101208712 isoform 2 [Cucumis sativus] gi|449487214|ref|XP_004157529.1| PREDICTED: uncharacterized protein LOC101228907 isoform 1 [Cucumis sativus] gi|449487218|ref|XP_004157530.1| PREDICTED: uncharacterized protein LOC101228907 isoform 2 [Cucumis sativus]

 Score =  206 bits (525), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 95/128 (74%), Positives = 112/128 (87%), Gaps = 1/128 (0%)

Query: 6   TQTAMSQSDKPKNVSTKSSKAQ-TPSPFKRWGRKHPFVRYGLPMISLTVFGAIGLGHLLQ 64
           T+  M QS +PK +S+ S+  + +PS F+RWGR+HPF+RYGLPMISLTV GA+GLGHLLQ
Sbjct: 4   TEAGMGQSAEPKKISSASNATRASPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQ 63

Query: 65  GSKDIAKVKDDQEWEIIEARKALSRTGPVDAYKPKNISLEEELKALQEKVDINNYEYKRI 124
           GSKDIAKVKDDQEWEI E R+ALSRTGP+DAYKPKNISLEEEL+ALQ+KVDINNYEYKRI
Sbjct: 64  GSKDIAKVKDDQEWEITEMREALSRTGPIDAYKPKNISLEEELRALQQKVDINNYEYKRI 123

Query: 125 PRPNEGKS 132
           P+P +  S
Sbjct: 124 PKPTDRTS 131

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|2244771|emb|CAB10194.1| kinesin like protein [Arabidopsis thaliana] gi|7268120|emb|CAB78457.1| kinesin like protein [Arabidopsis thaliana]

 Score =  201 bits (511), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 96/134 (71%), Positives = 108/134 (80%), Gaps = 1/134 (0%)

Query: 1    MTTVET-QTAMSQSDKPKNVSTKSSKAQTPSPFKRWGRKHPFVRYGLPMISLTVFGAIGL 59
            MTT+ET Q     S      +   +  Q+ + FKRWGR+HPFVRYGLPMISLTVFGA+GL
Sbjct: 1529 MTTIETGQKTQKSSPSGSGTTPTGTLKQSSASFKRWGRRHPFVRYGLPMISLTVFGALGL 1588

Query: 60   GHLLQGSKDIAKVKDDQEWEIIEARKALSRTGPVDAYKPKNISLEEELKALQEKVDINNY 119
            G LLQGSKDIAKVKDDQEWEIIE RKALSRTGPVDAYKPKN S+E+ELKA+QEKVDIN Y
Sbjct: 1589 GQLLQGSKDIAKVKDDQEWEIIETRKALSRTGPVDAYKPKNTSIEDELKAMQEKVDINTY 1648

Query: 120  EYKRIPRPNEGKSG 133
            EYK+IP+ NE KS 
Sbjct: 1649 EYKKIPKLNESKSS 1662

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|22328612|ref|NP_680684.1| uncharacterized protein [Arabidopsis thaliana] gi|117168131|gb|ABK32148.1| At4g14145 [Arabidopsis thaliana] gi|332657981|gb|AEE83381.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  199 bits (505), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 96/133 (72%), Positives = 108/133 (81%), Gaps = 1/133 (0%)

Query: 1   MTTVET-QTAMSQSDKPKNVSTKSSKAQTPSPFKRWGRKHPFVRYGLPMISLTVFGAIGL 59
           MTT+ET Q     S      +   +  Q+ + FKRWGR+HPFVRYGLPMISLTVFGA+GL
Sbjct: 1   MTTIETGQKTQKSSPSGSGTTPTGTLKQSSASFKRWGRRHPFVRYGLPMISLTVFGALGL 60

Query: 60  GHLLQGSKDIAKVKDDQEWEIIEARKALSRTGPVDAYKPKNISLEEELKALQEKVDINNY 119
           G LLQGSKDIAKVKDDQEWEIIE RKALSRTGPVDAYKPKN S+E+ELKA+QEKVDIN Y
Sbjct: 61  GQLLQGSKDIAKVKDDQEWEIIETRKALSRTGPVDAYKPKNTSIEDELKAMQEKVDINTY 120

Query: 120 EYKRIPRPNEGKS 132
           EYK+IP+ NE KS
Sbjct: 121 EYKKIPKLNESKS 133

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255587118|ref|XP_002534144.1| conserved hypothetical protein [Ricinus communis] gi|223525790|gb|EEF28237.1| conserved hypothetical protein [Ricinus communis]

 Score =  199 bits (505), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 91/104 (87%), Positives = 100/104 (96%)

Query: 28  TPSPFKRWGRKHPFVRYGLPMISLTVFGAIGLGHLLQGSKDIAKVKDDQEWEIIEARKAL 87
           + S FKRWGR+HPFVRYGLPMISLTVFGA+GLGHLLQGSKDIAKVKDDQEWEIIE RKAL
Sbjct: 10  STSSFKRWGRRHPFVRYGLPMISLTVFGAVGLGHLLQGSKDIAKVKDDQEWEIIETRKAL 69

Query: 88  SRTGPVDAYKPKNISLEEELKALQEKVDINNYEYKRIPRPNEGK 131
           SRTGP++AYKPK ISLEEELKALQ+KVDI+NYEYKRIP+PN+GK
Sbjct: 70  SRTGPLEAYKPKKISLEEELKALQQKVDIDNYEYKRIPKPNDGK 113

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297800850|ref|XP_002868309.1| hypothetical protein ARALYDRAFT_355402 [Arabidopsis lyrata subsp. lyrata] gi|297314145|gb|EFH44568.1| hypothetical protein ARALYDRAFT_355402 [Arabidopsis lyrata subsp. lyrata]

 Score =  197 bits (500), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 95/133 (71%), Positives = 108/133 (81%), Gaps = 1/133 (0%)

Query: 1   MTTVET-QTAMSQSDKPKNVSTKSSKAQTPSPFKRWGRKHPFVRYGLPMISLTVFGAIGL 59
           MTT+ET Q     S      +   +  Q+ + FKRWGR+HPFVRYGLPMISLTVFGA+GL
Sbjct: 1   MTTIETGQKTQQSSPSGSAAAATGTLKQSSASFKRWGRRHPFVRYGLPMISLTVFGALGL 60

Query: 60  GHLLQGSKDIAKVKDDQEWEIIEARKALSRTGPVDAYKPKNISLEEELKALQEKVDINNY 119
           G LLQGSKDIAKVKDDQEWEIIE RKALSRTGPVDAYKPKN S+E+ELKA+Q+KVDIN Y
Sbjct: 61  GQLLQGSKDIAKVKDDQEWEIIETRKALSRTGPVDAYKPKNTSIEDELKAMQQKVDINTY 120

Query: 120 EYKRIPRPNEGKS 132
           EYK+IP+ NE KS
Sbjct: 121 EYKKIPKLNESKS 133

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224109776|ref|XP_002315307.1| predicted protein [Populus trichocarpa] gi|118486413|gb|ABK95046.1| unknown [Populus trichocarpa] gi|118487094|gb|ABK95377.1| unknown [Populus trichocarpa] gi|222864347|gb|EEF01478.1| predicted protein [Populus trichocarpa]

 Score =  189 bits (479), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 94/133 (70%), Positives = 107/133 (80%), Gaps = 3/133 (2%)

Query: 1   MTTVETQTAMSQSDKPKNVSTKSSKAQTPSPFKRWGRKHPFVRYGLPMISLTVFGAIGLG 60
           M+T+ET   MSQ  K  N + K  +    S FKRWGR HPFVRYGLPMISLTVFG+IGL 
Sbjct: 1   MSTIETN--MSQPHKTTNAARKI-ETSFASSFKRWGRGHPFVRYGLPMISLTVFGSIGLA 57

Query: 61  HLLQGSKDIAKVKDDQEWEIIEARKALSRTGPVDAYKPKNISLEEELKALQEKVDINNYE 120
           HLLQG KDIAKVKDD+EWEIIE + ALSR+GP  +Y PK +SLEEELKALQ+KVDI N+E
Sbjct: 58  HLLQGRKDIAKVKDDREWEIIETQGALSRSGPPGSYNPKKMSLEEELKALQKKVDITNFE 117

Query: 121 YKRIPRPNEGKSG 133
           YK+IPRPNEGKSG
Sbjct: 118 YKKIPRPNEGKSG 130

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388515895|gb|AFK46009.1| unknown [Lotus japonicus]

 Score =  184 bits (467), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 86/112 (76%), Positives = 100/112 (89%), Gaps = 1/112 (0%)

Query: 19  VSTKSSKAQTP-SPFKRWGRKHPFVRYGLPMISLTVFGAIGLGHLLQGSKDIAKVKDDQE 77
           +++   ++Q P + FKRWGRK PFVRYGLP ISLTV G++GL HLLQGSKDIAKVKDDQE
Sbjct: 1   MTSTVHQSQNPATSFKRWGRKSPFVRYGLPTISLTVLGSLGLAHLLQGSKDIAKVKDDQE 60

Query: 78  WEIIEARKALSRTGPVDAYKPKNISLEEELKALQEKVDINNYEYKRIPRPNE 129
           WEIIEARKALSRTGPVDAY+PK ISLE+ELK LQ+KVDIN+YEYK+IP+PNE
Sbjct: 61  WEIIEARKALSRTGPVDAYQPKKISLEDELKVLQQKVDINDYEYKKIPKPNE 112

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356576229|ref|XP_003556236.1| PREDICTED: uncharacterized protein LOC100817712 [Glycine max]

 Score =  181 bits (460), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 84/105 (80%), Positives = 93/105 (88%)

Query: 26  AQTPSPFKRWGRKHPFVRYGLPMISLTVFGAIGLGHLLQGSKDIAKVKDDQEWEIIEARK 85
           A T   FKRWGR++PFVRYGLPMISLTV G+IGL  LLQGSKDIAKVKDD+EWEIIE RK
Sbjct: 14  ATTEKAFKRWGRRNPFVRYGLPMISLTVLGSIGLSQLLQGSKDIAKVKDDREWEIIETRK 73

Query: 86  ALSRTGPVDAYKPKNISLEEELKALQEKVDINNYEYKRIPRPNEG 130
           ALSRTGPV+AY PK ISLE+EL ALQ+KVDINNYEYK+IP+P EG
Sbjct: 74  ALSRTGPVNAYNPKKISLEDELMALQQKVDINNYEYKKIPKPKEG 118

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358248068|ref|NP_001239805.1| uncharacterized protein LOC100814113 [Glycine max] gi|255633952|gb|ACU17338.1| unknown [Glycine max]

 Score =  177 bits (450), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 81/103 (78%), Positives = 93/103 (90%)

Query: 28  TPSPFKRWGRKHPFVRYGLPMISLTVFGAIGLGHLLQGSKDIAKVKDDQEWEIIEARKAL 87
           T   FKRWGR+ PF+RYGLPMISLTV G+IGL  LLQGSKDIAKVKDDQEWEIIE +KAL
Sbjct: 16  TEKAFKRWGRRTPFLRYGLPMISLTVLGSIGLAQLLQGSKDIAKVKDDQEWEIIETKKAL 75

Query: 88  SRTGPVDAYKPKNISLEEELKALQEKVDINNYEYKRIPRPNEG 130
           S+TGPV+AY PK ISLE+ELKALQ+KVDIN+YEYK+IP+PN+G
Sbjct: 76  SKTGPVNAYNPKKISLEDELKALQQKVDINSYEYKKIPKPNKG 118

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357112744|ref|XP_003558167.1| PREDICTED: uncharacterized protein LOC100834651 [Brachypodium distachyon]

 Score =  176 bits (445), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 79/107 (73%), Positives = 95/107 (88%), Gaps = 1/107 (0%)

Query: 26  AQTPSPFKRWGRKHPFVRYGLPMISLTVFGAIGLGHLLQGSKDIAKVKDDQEWEIIEARK 85
           AQ  S F+RWGRKHPFVRYGLP+ISLTVFGA+GL HL+QGSK++ + K+D EWE++E  K
Sbjct: 14  AQQASQFRRWGRKHPFVRYGLPLISLTVFGAVGLAHLIQGSKEVTREKEDMEWEVVETTK 73

Query: 86  ALSRTGPVD-AYKPKNISLEEELKALQEKVDINNYEYKRIPRPNEGK 131
           ALSRTGPV+ AYKPK +SLE+ELKALQ+KVDINNY+YKRIP+PNE K
Sbjct: 74  ALSRTGPVEGAYKPKKLSLEDELKALQQKVDINNYDYKRIPKPNENK 120

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	133
TAIR|locus:504955447	134	AT4G14145 "AT4G14145" [Arabido	0.992	0.985	0.721	9.8e-48
UNIPROTKB|F1S4A8	106	COX16 "Uncharacterized protein	0.646	0.811	0.326	0.0001
UNIPROTKB|E2R7F5	106	COX16 "Uncharacterized protein	0.586	0.735	0.333	0.00027
UNIPROTKB|Q2NKS2	107	COX16 "Cytochrome c oxidase as	0.586	0.728	0.333	0.00045
MGI|MGI:1913522	106	Cox16 "cytochrome c oxidase as	0.586	0.735	0.333	0.00057
ZFIN|ZDB-GENE-050417-60	107	cox16 "COX16 cytochrome c oxid	0.578	0.719	0.318	0.00093

TAIR|locus:504955447 AT4G14145 "AT4G14145" [Arabidopsis thaliana (taxid:3702)]

 Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
 Identities = 96/133 (72%), Positives = 108/133 (81%)

Query:     1 MTTVET-QTAMSQSDKPKNVSTKSSKAQTPSPFKRWGRKHPFVRYGLPMISLTVFGAIGL 59
             MTT+ET Q     S      +   +  Q+ + FKRWGR+HPFVRYGLPMISLTVFGA+GL
Sbjct:     1 MTTIETGQKTQKSSPSGSGTTPTGTLKQSSASFKRWGRRHPFVRYGLPMISLTVFGALGL 60

Query:    60 GHLLQGSKDIAKVKDDQEWEIIEARKALSRTGPVDAYKPKNISLEEELKALQEKVDINNY 119
             G LLQGSKDIAKVKDDQEWEIIE RKALSRTGPVDAYKPKN S+E+ELKA+QEKVDIN Y
Sbjct:    61 GQLLQGSKDIAKVKDDQEWEIIETRKALSRTGPVDAYKPKNTSIEDELKAMQEKVDINTY 120

Query:   120 EYKRIPRPNEGKS 132
             EYK+IP+ NE KS
Sbjct:   121 EYKKIPKLNESKS 133

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

UNIPROTKB|F1S4A8 COX16 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 93 (37.8 bits), Expect = 0.00010, P = 0.00010
 Identities = 33/101 (32%), Positives = 48/101 (47%)

Query:    29 PSPFKRWGRKHPFVRYGLPMISLTVFGAIGLGHLLQGSKDIAKVKDDQEWEIIEARKALS 88
             P    R  RK+  +RYG+PM+ L V G+ GL    Q   D  K+K D E E     K L 
Sbjct:     3 PQAVMRAFRKNKTLRYGVPMLLLVVGGSFGLREFSQIRYDAVKIKIDPELE-----KKL- 56

Query:    89 RTGPVDAYKPKNISLEEELKALQEKVDINNYEYKRIPRPNE 129
                     K   +SLE E + +++    ++++  R PRP E
Sbjct:    57 --------KMNKVSLESEYEKIKDST-FDDWKNIRGPRPWE 88

GO:0031966 "mitochondrial membrane" evidence=IEA

UNIPROTKB|E2R7F5 COX16 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 89 (36.4 bits), Expect = 0.00027, P = 0.00027
 Identities = 31/93 (33%), Positives = 46/93 (49%)

Query:    37 RKHPFVRYGLPMISLTVFGAIGLGHLLQGSKDIAKVKDDQEWEIIEARKALSRTGPVDAY 96
             RK+  +RYG+PM+ L V G+ GL    Q   D  K+K D E E     K L         
Sbjct:    11 RKNKTLRYGVPMLLLIVGGSFGLREFSQIRYDAVKIKIDPELE-----KKL--------- 56

Query:    97 KPKNISLEEELKALQEKVDINNYEYKRIPRPNE 129
             K   +SLE E + +++    ++++  R PRP E
Sbjct:    57 KMNKVSLESEYEKMKDST-FDDWKNIRGPRPWE 88

GO:0031966 "mitochondrial membrane" evidence=IEA

UNIPROTKB|Q2NKS2 COX16 "Cytochrome c oxidase assembly protein COX16 homolog, mitochondrial" [Bos taurus (taxid:9913)]

 Score = 87 (35.7 bits), Expect = 0.00045, P = 0.00045
 Identities = 31/93 (33%), Positives = 45/93 (48%)

Query:    37 RKHPFVRYGLPMISLTVFGAIGLGHLLQGSKDIAKVKDDQEWEIIEARKALSRTGPVDAY 96
             RK   +RYG+PM+ L V G+ GL    Q   D  K+K D E E     K L         
Sbjct:    11 RKSKTLRYGVPMLLLIVGGSFGLREFSQIRYDAVKIKIDPELE-----KKL--------- 56

Query:    97 KPKNISLEEELKALQEKVDINNYEYKRIPRPNE 129
             K   +SLE E + +++    ++++  R PRP E
Sbjct:    57 KMNKVSLESEYEKIKDST-FDDWKNIRGPRPWE 88

GO:0031966 "mitochondrial membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

MGI|MGI:1913522 Cox16 "cytochrome c oxidase assembly protein 16" [Mus musculus (taxid:10090)]

 Score = 86 (35.3 bits), Expect = 0.00057, P = 0.00057
 Identities = 31/93 (33%), Positives = 44/93 (47%)

Query:    37 RKHPFVRYGLPMISLTVFGAIGLGHLLQGSKDIAKVKDDQEWEIIEARKALSRTGPVDAY 96
             RK+  +RYG+PM+ L V G+ GL    Q   D   +K D E E     K L         
Sbjct:    11 RKNKTLRYGVPMLLLVVGGSFGLREFSQIRYDAVTIKIDPELE-----KKL--------- 56

Query:    97 KPKNISLEEELKALQEKVDINNYEYKRIPRPNE 129
             K   I+LE E + +++     N++  R PRP E
Sbjct:    57 KVNKITLESEYEKIKDST-FENWKNIRGPRPWE 88

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=IDA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0031966 "mitochondrial membrane" evidence=IEA

ZFIN|ZDB-GENE-050417-60 cox16 "COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)" [Danio rerio (taxid:7955)]

 Score = 84 (34.6 bits), Expect = 0.00093, P = 0.00093
 Identities = 28/88 (31%), Positives = 49/88 (55%)

Query:    42 VRYGLPMISLTVFGAIGLGHLLQGSKDIAKVKDDQEWEIIEARKALSRTGPVDAYKPKNI 101
             V+YG+PM+ L V G+ GL    Q   D  K++   +   +EAR        V + K +++
Sbjct:    14 VKYGVPMLLLIVGGSFGLREFTQIRYDAQKIQRKLD-PALEAR--------VKSQK-QSV 63

Query:   102 SLEEELKALQEKVDINNYEYKRIPRPNE 129
              L+EE + L+++ D++ ++  R PRP E
Sbjct:    64 ILQEEYEKLKDQ-DLDGWKNIRGPRPWE 90


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.311   0.129   0.369    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      133       133   0.00091  102 3  11 23  0.50    31
                                                     30  0.43    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  546 (58 KB)
  Total size of DFA:  126 KB (2082 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  16.72u 0.11s 16.83t   Elapsed:  00:00:00
  Total cpu time:  16.72u 0.11s 16.83t   Elapsed:  00:00:00
  Start:  Fri May 10 04:51:55 2013   End:  Fri May 10 04:51:55 2013

GO:0031966 "mitochondrial membrane" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	DL3115C	unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- chloroplast; Has 16 Blast hits to 16 proteins in 7 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink). (134 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	ARPC4	ARPC4; protein binding; actin-related protein 2/3 complex 34kDa subunit family / arp2/3 complex [...] (169 aa)							•		0.919
	PAKRP1	PAKRP1 (PHRAGMOPLAST-ASSOCIATED KINESIN-RELATED PROTEIN 1); microtubule motor/ plus-end-directe [...] (1292 aa)							•		0.563
	ARPC1A	ARPC1A (ACTIN-RELATED PROTEIN C1A); actin binding / nucleotide binding; ACTIN-RELATED PROTEIN C [...] (378 aa)							•		0.408
	ARPC1B	ARPC1B (ACTIN-RELATED PROTEIN C1B); actin binding / nucleotide binding; putative ARP2/3 protein [...] (378 aa)							•		0.408

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	133
pfam14138	79	pfam14138, COX16, Cytochrome c oxidase assembly pr	7e-26
COG3697	182	COG3697, CitX, Phosphoribosyl-dephospho-CoA transf	0.003

>gnl|CDD|206307 pfam14138, COX16, Cytochrome c oxidase assembly protein COX16

 Score = 92.2 bits (230), Expect = 7e-26
 Identities = 32/88 (36%), Positives = 43/88 (48%), Gaps = 10/88 (11%)

Query: 42  VRYGLPMISLTVFGAIGLGHLLQGSKDIAKVKDDQEWEIIEARKALSRTGPVDAYKPKNI 101
           +R+GLP + L V G+ GL    Q   +    K  Q  E  EA K L         K + +
Sbjct: 1   LRFGLPFLLLIVGGSFGLTPFTQLRYERRDRKVQQL-EEEEALKLL--------KKRRKV 51

Query: 102 SLEEELKALQEKVDINNYEYKRIPRPNE 129
            LEEE   LQ   DI+++E  R+PRP E
Sbjct: 52  DLEEEYYRLQGL-DIDDWENVRVPRPKE 78

This family represents homologues of COX16 which has been shown to be involved in assembly of cytochrome oxidase. Protein in this family are typically between 106 and 134 amino acids in length. Length = 79

>gnl|CDD|226221 COG3697, CitX, Phosphoribosyl-dephospho-CoA transferase (holo-ACP synthetase) [Coenzyme metabolism / Lipid metabolism]

 Score = 35.5 bits (82), Expect = 0.003
 Identities = 27/92 (29%), Positives = 38/92 (41%), Gaps = 17/92 (18%)

Query: 33  KRWGRKHPFV-RYGLPMISLTVF--GAIGLGHLLQGSKDIAKVK-----DDQEWEIIEAR 84
           +R  R+  ++ RY LP++S TV   G I    +L+   DI           Q W I+E  
Sbjct: 23  ERQARQREWLKRYPLPLVSFTVNAPGPIKTSAVLRRVFDIGVTAILALLAKQGWTIVEQA 82

Query: 85  KALSRTGP-------VDAYKPKN--ISLEEEL 107
             +  TGP         A   K   I+LEE  
Sbjct: 83  ALVEATGPEAMLSIAAPARDLKLAMIALEESH 114

Length = 182

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	133
PF14138	80	COX16: Cytochrome c oxidase assembly protein COX16	100.0
PF08285	91	DPM3: Dolichol-phosphate mannosyltransferase subun	86.49

>PF14138 COX16: Cytochrome c oxidase assembly protein COX16

Probab=100.00  E-value=7.2e-38  Score=219.15  Aligned_cols=80  Identities=38%  Similarity=0.544  Sum_probs=68.4

Q ss_pred             eeecchhHHHHHHHHHHHHHhhhhhhhhhhccchhHHHHHHHHHhhcccCCCCCCCCCcCCHHHHHHHHHhhcCCCCccc
Q 032814           42 VRYGLPMISLTVFGAIGLGHLLQGSKDIAKVKDDQEWEIIEARKALSRTGPVDAYKPKNISLEEELKALQEKVDINNYEY  121 (133)
Q Consensus        42 l~fGLPFl~liVgGSfgL~~ftq~RYe~~d~K~~~~~e~~e~~~~L~keg~l~~~~~r~vdLeeEY~rLq~k~d~ddWEn  121 (133)
                      |+||||||++||||||||++|||+|||++|.|+++..+.    +++   +.. ++++++|||||||||||+ +|+|||||
T Consensus         1 l~~GlPf~~liV~GS~gL~~ftq~Rye~~d~k~~~~~~~----e~~---~~~-~~~~~~v~leeEy~rl~~-~d~ddwE~   71 (80)
T PF14138_consen    1 LRFGLPFLLLIVGGSFGLSEFTQIRYERRDRKVQQDEEE----EAL---KLL-MKNRRKVDLEEEYYRLQQ-KDIDDWEN   71 (80)
T ss_pred             CcccccHHHHHHHHHHHHHHHHHHHhhHHhhcccchhHH----HHH---hcc-ccccCCCCHHHHHHHHHh-cccccccc
Confidence            589999999999999999999999999999999765322    122   111 357899999999999996 69999999


Q ss_pred             ccCCCCCCC
Q 032814          122 KRIPRPNEG  130 (133)
Q Consensus       122 kRvPRp~Ed  130 (133)
                      |||||||||
T Consensus        72 ~RvpRp~ee   80 (80)
T PF14138_consen   72 KRVPRPWEE   80 (80)
T ss_pred             ccCCCCCCC
Confidence            999999997

>PF08285 DPM3: Dolichol-phosphate mannosyltransferase subunit 3 (DPM3); InterPro: IPR013174 This family corresponds to subunit 3 of dolichol-phosphate mannosyltransferase, an enzyme which generates mannosyl donors for glycosylphosphatidylinositols, N-glycan and protein O- and C-mannosylation

Probab=86.49  E-value=1.5  Score=31.50  Aligned_cols=49  Identities=29%  Similarity=0.333  Sum_probs=31.3

Q ss_pred             eecchhHHHHHHHHHHHHHhhhhhhhhhhccch---hHHHHHHHHHhhcccC
Q 032814           43 RYGLPMISLTVFGAIGLGHLLQGSKDIAKVKDD---QEWEIIEARKALSRTG   91 (133)
Q Consensus        43 ~fGLPFl~liVgGSfgL~~ftq~RYe~~d~K~~---~~~e~~e~~~~L~keg   91 (133)
                      ..=+||.++++.|+|.|...-=.=+.++|....   -.-|+.|++..|.+.|
T Consensus        37 i~~lP~~~Lv~fG~Ysl~~lgy~v~tFnDcpeA~~eL~~eI~eAK~dLr~kG   88 (91)
T PF08285_consen   37 IPYLPFYALVSFGCYSLFTLGYGVATFNDCPEAAKELQKEIKEAKADLRKKG   88 (91)
T ss_pred             HHHhhHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence            345899999999999998876655556654321   1223444555554444

DPM3 is an integral membrane protein and plays a role in stabilising the dolichol-phosphate mannosyl transferase complex [].

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00