Citrus Sinensis ID: 034284

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------10
Protein Sequence
MTQKGNLFKGQQKKKTVPPNRHGKIIQARKGKRYVKPSKITKDMDVDRELTKFINHCNEVKAATLANKEGGQLSIVKPPAESSATAGNKKDSQPETAEA
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccEEccccEEEccccccccccHHHHHHHHHHHHHHHHHHHHHccccccEEEEccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mtqkgnlfkgqqkkktvppnrhgkiiqarkgkryvkpskitkdmdVDRELTKFINHCNEVKAATlankeggqlsivkppaessatagnkkdsqpetaea
Flexible Loop (DISEMBL)
mtqkgnlfkgqqkkktvppnrhgkiiqarkgkryvkpskitkdmdvDRELTKFINHCNEVKAAtlankeggqlsivkppaessatagnkkdsqpetaea
Low Complexity Region (SEG)
MTQKGNLFKGQQKKKTVPPNRHGKIIQARKGKRYVKPSKITKDMDVDRELTKFINHCNEVKAATLANKEGGQLSIVKPPAESSATAGNKKDSQPETAEA
Disordered region (IsUnstruct)
*********************************************VDRELTKFINHCNEVKAATL**********************************
Disordered Region (DISOPRED)
*************************************************LTKFINHCNEV***************************************
Disordered Region (DISEMBL)
********************RHGKIIQARKGKRYVKPSKITKDMDVDRELTKFINHCNEVKAATLANKEGGQLSIVKP*********************
Disordered Region (DISPRO)
***************TV******KIIQARKGKRYVKPSKITKDMDVDRELTKFINHCNEVKAATLANKEGGQLSIVKP*********************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MTQKGNLFKGQQKKKTVPPNRHGKIIQARKGKRYVKPSKITKDMDVDRELTKFINHCNEVKAATLANKEGGQLSIVKPPAESSATAGNKKDSQPETAEA
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	99
118485495	88	unknown [Populus trichocarpa]	0.868	0.977	0.755	3e-32
224104105	90	predicted protein [Populus trichocarpa]	0.868	0.955	0.779	4e-32
255553432	85	conserved hypothetical protein [Ricinus	0.838	0.976	0.779	5e-32
224059596	88	predicted protein [Populus trichocarpa]	0.868	0.977	0.744	3e-31
449436335	90	PREDICTED: uncharacterized protein LOC10	0.828	0.911	0.780	4e-31
356531647	85	PREDICTED: uncharacterized protein LOC10	0.848	0.988	0.726	7e-31
225449993	88	PREDICTED: uncharacterized protein LOC10	0.868	0.977	0.755	1e-30
42565420	96	unknown [Hyacinthus orientalis]	0.838	0.864	0.746	3e-28
297819912	90	hypothetical protein ARALYDRAFT_906563 [	0.828	0.911	0.731	5e-28
15231119	90	uncharacterized protein [Arabidopsis tha	0.808	0.888	0.756	2e-27

>gi|118485495|gb|ABK94602.1| unknown [Populus trichocarpa]

 Score =  142 bits (357), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 65/86 (75%), Positives = 77/86 (89%)

Query: 1  MTQKGNLFKGQQKKKTVPPNRHGKIIQARKGKRYVKPSKITKDMDVDRELTKFINHCNEV 60
          MTQK +LFKGQQK+KTVPPNRHGK    RKGKR+VKPSK+T++MD DREL+KFIN+CNE+
Sbjct: 1  MTQKNSLFKGQQKRKTVPPNRHGKTPHIRKGKRFVKPSKVTEEMDADRELSKFINNCNEI 60

Query: 61 KAATLANKEGGQLSIVKPPAESSATA 86
          KAAT ANKEGGQLSIVKPP E+++ A
Sbjct: 61 KAATAANKEGGQLSIVKPPTETASAA 86

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224104105|ref|XP_002313321.1| predicted protein [Populus trichocarpa] gi|222849729|gb|EEE87276.1| predicted protein [Populus trichocarpa]

 Score =  141 bits (356), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 67/86 (77%), Positives = 73/86 (84%)

Query: 1  MTQKGNLFKGQQKKKTVPPNRHGKIIQARKGKRYVKPSKITKDMDVDRELTKFINHCNEV 60
          MTQK NLFKGQQKKKTVPPNRHGKI   RKGKR+VKPS   K+MD DREL+KFIN+CNE+
Sbjct: 1  MTQKNNLFKGQQKKKTVPPNRHGKITHIRKGKRFVKPSNFMKEMDADRELSKFINNCNEI 60

Query: 61 KAATLANKEGGQLSIVKPPAESSATA 86
          KAAT ANKEGGQLSIVKPP E +  A
Sbjct: 61 KAATAANKEGGQLSIVKPPPEPARAA 86

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255553432|ref|XP_002517757.1| conserved hypothetical protein [Ricinus communis] gi|223543029|gb|EEF44564.1| conserved hypothetical protein [Ricinus communis]

 Score =  141 bits (356), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 67/86 (77%), Positives = 76/86 (88%), Gaps = 3/86 (3%)

Query: 1  MTQKGNLFKGQQKKKTVPPNRHGKIIQARKGKRYVKPSKITKDMDVDRELTKFINHCNEV 60
          MTQKGNLFKG+QKKKT+PPNRHG     RKGKRYVKPSK+TK+MD DREL+KFINHCNEV
Sbjct: 1  MTQKGNLFKGKQKKKTIPPNRHG---XTRKGKRYVKPSKVTKEMDADRELSKFINHCNEV 57

Query: 61 KAATLANKEGGQLSIVKPPAESSATA 86
          KAAT+ANKEGGQLSIVK P+E +  +
Sbjct: 58 KAATIANKEGGQLSIVKLPSEPAGAS 83

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224059596|ref|XP_002299925.1| predicted protein [Populus trichocarpa] gi|222847183|gb|EEE84730.1| predicted protein [Populus trichocarpa]

 Score =  139 bits (349), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 64/86 (74%), Positives = 76/86 (88%)

Query: 1  MTQKGNLFKGQQKKKTVPPNRHGKIIQARKGKRYVKPSKITKDMDVDRELTKFINHCNEV 60
          MTQK +LFKGQQK+KTVPPNRHGK    RKGKR+VKPSK+T++M  DREL+KFIN+CNE+
Sbjct: 1  MTQKNSLFKGQQKRKTVPPNRHGKTPHIRKGKRFVKPSKVTEEMGADRELSKFINNCNEI 60

Query: 61 KAATLANKEGGQLSIVKPPAESSATA 86
          KAAT ANKEGGQLSIVKPP E+++ A
Sbjct: 61 KAATAANKEGGQLSIVKPPTETASAA 86

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449436335|ref|XP_004135948.1| PREDICTED: uncharacterized protein LOC101210742 [Cucumis sativus] gi|449488815|ref|XP_004158180.1| PREDICTED: uncharacterized protein LOC101229068 [Cucumis sativus]

 Score =  138 bits (348), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 64/82 (78%), Positives = 73/82 (89%)

Query: 1  MTQKGNLFKGQQKKKTVPPNRHGKIIQARKGKRYVKPSKITKDMDVDRELTKFINHCNEV 60
          MTQK NLFKG+QK KT+PPNRHGKI Q RKGKR+VKPSK TK+M+ DRE++KFIN+CNE 
Sbjct: 1  MTQKANLFKGKQKTKTIPPNRHGKIPQTRKGKRFVKPSKTTKEMETDREVSKFINYCNET 60

Query: 61 KAATLANKEGGQLSIVKPPAES 82
          KAATLANKEGGQLSIVK PA +
Sbjct: 61 KAATLANKEGGQLSIVKTPANA 82

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356531647|ref|XP_003534388.1| PREDICTED: uncharacterized protein LOC100305506 [Glycine max] gi|356542820|ref|XP_003539863.1| PREDICTED: uncharacterized protein LOC100777443 [Glycine max] gi|255625725|gb|ACU13207.1| unknown [Glycine max]

 Score =  137 bits (345), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 61/84 (72%), Positives = 74/84 (88%)

Query: 1  MTQKGNLFKGQQKKKTVPPNRHGKIIQARKGKRYVKPSKITKDMDVDRELTKFINHCNEV 60
          MTQK NLFKG+ KKK++PPNRHGK+   RKGKR+VKPSK+TKDMD DRE++KFINHCNE+
Sbjct: 1  MTQKANLFKGKAKKKSIPPNRHGKVPVTRKGKRFVKPSKVTKDMDTDREVSKFINHCNEI 60

Query: 61 KAATLANKEGGQLSIVKPPAESSA 84
          KAATLA K+GGQL I+KPP E ++
Sbjct: 61 KAATLATKDGGQLGIIKPPQEPAS 84

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225449993|ref|XP_002273809.1| PREDICTED: uncharacterized protein LOC100255155 [Vitis vinifera] gi|297736337|emb|CBI24975.3| unnamed protein product [Vitis vinifera]

 Score =  137 bits (344), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 65/86 (75%), Positives = 73/86 (84%)

Query: 1  MTQKGNLFKGQQKKKTVPPNRHGKIIQARKGKRYVKPSKITKDMDVDRELTKFINHCNEV 60
          MTQK NLFKGQ K+K + PNRHGK  Q RKGKR VKPSK+TK+MD DRE++KFINHCNEV
Sbjct: 1  MTQKSNLFKGQPKRKVIAPNRHGKPCQTRKGKRVVKPSKVTKEMDADREVSKFINHCNEV 60

Query: 61 KAATLANKEGGQLSIVKPPAESSATA 86
          KAAT+ANKEGGQLSIVK P+E S  A
Sbjct: 61 KAATVANKEGGQLSIVKTPSEPSNAA 86

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42565420|gb|AAS20983.1| unknown [Hyacinthus orientalis]

 Score =  129 bits (323), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 62/83 (74%), Positives = 71/83 (85%)

Query: 1  MTQKGNLFKGQQKKKTVPPNRHGKIIQARKGKRYVKPSKITKDMDVDRELTKFINHCNEV 60
          MTQKGNLFKG +K KT+PPNRHGK+   RKGKR+VKPSK TK M+ DREL+KFINH NEV
Sbjct: 1  MTQKGNLFKGIKKSKTIPPNRHGKVPTTRKGKRFVKPSKTTKAMETDRELSKFINHRNEV 60

Query: 61 KAATLANKEGGQLSIVKPPAESS 83
          KAAT ANK+GGQL+IVKP  E+S
Sbjct: 61 KAATQANKDGGQLAIVKPQPEAS 83

Source: Hyacinthus orientalis

Species: Hyacinthus orientalis

Genus: Hyacinthus

Family: Hyacinthaceae

Order: Asparagales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297819912|ref|XP_002877839.1| hypothetical protein ARALYDRAFT_906563 [Arabidopsis lyrata subsp. lyrata] gi|297323677|gb|EFH54098.1| hypothetical protein ARALYDRAFT_906563 [Arabidopsis lyrata subsp. lyrata]

 Score =  128 bits (321), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 60/82 (73%), Positives = 69/82 (84%)

Query: 1  MTQKGNLFKGQQKKKTVPPNRHGKIIQARKGKRYVKPSKITKDMDVDRELTKFINHCNEV 60
          MTQK N FKGQQK+KT+ PNRHGK IQ RKGKR VKPSK+TK+MD DRELTKFINHCNEV
Sbjct: 1  MTQKSNQFKGQQKRKTIAPNRHGKSIQTRKGKRNVKPSKMTKEMDTDRELTKFINHCNEV 60

Query: 61 KAATLANKEGGQLSIVKPPAES 82
          KA   A K GGQL+I+KP +++
Sbjct: 61 KATNAACKVGGQLNIIKPESQA 82

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15231119|ref|NP_190772.1| uncharacterized protein [Arabidopsis thaliana] gi|4678933|emb|CAB41324.1| putative protein [Arabidopsis thaliana] gi|21618124|gb|AAM67174.1| unknown [Arabidopsis thaliana] gi|88010973|gb|ABD38881.1| At3g52030 [Arabidopsis thaliana] gi|90962950|gb|ABE02399.1| At3g52040 [Arabidopsis thaliana] gi|332645357|gb|AEE78878.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  126 bits (317), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 62/82 (75%), Positives = 69/82 (84%), Gaps = 2/82 (2%)

Query: 1  MTQKGNLFKGQQKKKTVPPNRHGKIIQARKGKRYVKPSKITKDMDVDRELTKFINHCNEV 60
          MTQK N FKGQQK+KT+ PNRHGK IQ RKGKR VKP+K+TK+MD DRELTKFINHCNEV
Sbjct: 1  MTQKSNQFKGQQKRKTIAPNRHGKSIQTRKGKRNVKPTKMTKEMDTDRELTKFINHCNEV 60

Query: 61 KAATLANKEGGQLSIVKPPAES 82
          KA   A KEGGQL+I+K  AES
Sbjct: 61 KATNAACKEGGQLNIIK--AES 80

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	99
TAIR|locus:2083755	90	AT3G52040 "AT3G52040" [Arabido	0.878	0.966	0.707	1.2e-28
POMBASE|SPCC24B10.18	93	SPCC24B10.18 "human Leydig cel	0.737	0.784	0.316	5e-05
ZFIN|ZDB-GENE-060331-129	98	zgc:136864 "zgc:136864" [Danio	0.787	0.795	0.337	0.00073

TAIR|locus:2083755 AT3G52040 "AT3G52040" [Arabidopsis thaliana (taxid:3702)]

 Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
 Identities = 63/89 (70%), Positives = 70/89 (78%)

Query:     1 MTQKGNLFKGQQKKKTVPPNRHGKIIQARKGKRYVKPSKITKDMDVDRELTKFINHCNEV 60
             MTQK N FKGQQK+KT+ PNRHGK IQ RKGKR VKP+K+TK+MD DRELTKFINHCNEV
Sbjct:     1 MTQKSNQFKGQQKRKTIAPNRHGKSIQTRKGKRNVKPTKMTKEMDTDRELTKFINHCNEV 60

Query:    61 KAATLANKEGGQLSIVKPPAESSATAGNK 89
             KA   A KEGGQL+I+K  AES      K
Sbjct:    61 KATNAACKEGGQLNIIK--AESQPEPSKK 87

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

POMBASE|SPCC24B10.18 SPCC24B10.18 "human Leydig cell tumor 10 kDa protein homolog" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 96 (38.9 bits), Expect = 5.0e-05, P = 5.0e-05
 Identities = 25/79 (31%), Positives = 43/79 (54%)

Query:    12 QKKKTVPPNRHGKIIQ----ARKGKRYVKPSKIT--KDMDVDRELTKFINHCNEVKAATL 65
             +KKK    N+ G++ +     +KG RY  P +    KD  ++  +TK +N  NE   A +
Sbjct:     7 KKKKNSSANKGGRVTKHSKNPKKGARYCAPRRAAAIKDHTINANITKTLNVRNEKLIAGI 66

Query:    66 ANKEGGQLSIVKPPAESSA 84
             A+++ G+L+I K   E+ A
Sbjct:    67 ASQQVGKLTITKALGEAGA 85

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0008150 "biological_process" evidence=ND

ZFIN|ZDB-GENE-060331-129 zgc:136864 "zgc:136864" [Danio rerio (taxid:7955)]

 Score = 85 (35.0 bits), Expect = 0.00073, P = 0.00072
 Identities = 29/86 (33%), Positives = 45/86 (52%)

Query:     5 GNLFKGQQKKKTVPPNRHGKIIQARKGKRYVKPSKITKDMDVDRELTKFINHCNEVKAAT 64
             G   K Q K K +   + G+II  +K +  V+  K+ K ++V   +   I H    KA+T
Sbjct:    14 GGAKKHQNKPKGL--KKGGRIIAPKKAQ-VVQQQKLKKGLEV--AIRNKIEHEVTQKAST 68

Query:    65 LANKEGGQLSIVKPPAESSATAGNKK 90
               +K+   LS++K PA+ S TAG  K
Sbjct:    69 SLHKK---LSVLKTPAQKSGTAGAPK 91


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.307   0.125   0.343    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       99        99   0.00091  102 3  11 23  0.49    30
                                                     29  0.46    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  476 (51 KB)
  Total size of DFA:  93 KB (2069 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.39u 0.11s 12.50t   Elapsed:  00:00:00
  Total cpu time:  12.39u 0.11s 12.50t   Elapsed:  00:00:00
  Start:  Fri May 10 20:08:18 2013   End:  Fri May 10 20:08:18 2013

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pg.C_LG_IX1012 hypothetical protein (90 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	99
PF09495	82	DUF2462: Protein of unknown function (DUF2462); In	98.91

>PF09495 DUF2462: Protein of unknown function (DUF2462); InterPro: IPR019034 This protein family is highly conserved, but its function is unknown

Probab=98.91  E-value=3.4e-09  Score=71.52  Aligned_cols=77  Identities=32%  Similarity=0.434  Sum_probs=58.1

Q ss_pred             CCcccccccccccccCCCCCCCCccceecC-CccccCCCccc--ccchhhHHHHHHHHhhhHHHHHHHHHhcCCeeEEec
Q 034284            1 MTQKGNLFKGQQKKKTVPPNRHGKIIQARK-GKRYVKPSKIT--KDMDVDRELTKFINHCNEVKAATLANKEGGQLSIVK   77 (99)
Q Consensus         1 m~qk~~lfkg~~KkKt~aaNRHGK~~k~RK-GKr~~kP~k~t--kd~~~~~elTK~IN~~NE~~aA~~A~k~GGkL~IvK   77 (99)
                      |.|-.-=|+.+.-......++++.  .+++ |.|+++|.+..  +++...+.||+.||.+||.+.+.+|++  |.|.||+
T Consensus         1 MAQG~~K~K~k~~~~~k~~~kk~~--~~kK~g~r~i~PKK~~~v~~~klkK~lt~~i~~~~E~~l~~rAs~--G~L~llk   76 (82)
T PF09495_consen    1 MAQGKLKFKAKKPKKKKAAKKKAK--GPKKKGKRVIAPKKAKAVKQQKLKKKLTKGINKKIEKELASRASS--GKLELLK   76 (82)
T ss_pred             CCCCCcccccCCCCCCcccccccC--CCCCCCCCcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCceeec
Confidence            778774344432111113444443  4566 99999999865  889999999999999999999999999  9999999


Q ss_pred             CCCc
Q 034284           78 PPAE   81 (99)
Q Consensus        78 ~p~e   81 (99)
                      .+.+
T Consensus        77 ~~~~   80 (82)
T PF09495_consen   77 GGKK   80 (82)
T ss_pred             cccc
Confidence            7643

It can be isolated from HeLa cell nucleoli and contains the Leydig cell tumor 10 kDa protein homologs [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00