Citrus Sinensis ID: 034767

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80----
Protein Sequence
MCPLRFILVFFSAVLAGYFAWRTVRSSPEADINSLSDDSPNDKTSLKDEDESNFTRSIQNGFWVFVDMASGRYLWRNLREIKKH
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccHHHHHHHHcHHHHHHccccHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHcccEEEEEcHcHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
MCPLRFILVFFSAVLAGYFAWrtvrsspeadinslsddspndktslkdedesnftrSIQNGFWVFVDMASGRYLWRNLREIKKH
Flexible Loop (DISEMBL)
MCPLRFILVFFSAVLAGYFAWRTVRSspeadinslsddspndktslkdedesnftrsiqngfwVFVDMASGRYLWRNLREIKKH
Low Complexity Region (SEG)
MCPLRFILVFFSAVLAGYFAWRTVRSSPEADINSLSDDSPNDKTSLKDEDESNFTRSIQNGFWVFVDMASGRYLWRNLREIKKH
Disordered region (IsUnstruct)
**PLRFILVFFSAVLAGYFAWRTV********************************SIQNGFWVFVDMASGRYLWRNLR*****
Disordered Region (DISOPRED)
MCPLRFILVFFSAVLAGYFAWRTVRSSPE***************************SIQNGFWVFVDMASGRYLW**LR*****
Disordered Region (DISEMBL)
MCPLRFILVFFSAVLAGYFAWRTVRSSP************************NFTRSIQNGFWVFVDMASGRYLWRNLREIKKH
Disordered Region (DISPRO)
MCPLRFILVFFSAVLAGYFAWRTVR**************************SNFTRSIQNGFWVFVDMASGRYLWRNLREIK**
Transmembrane Helix (TMHMM)
oooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MCPLRFILVFFSAVLAGYFAWRTVRSSPEADINSLSDDSPNDKTSLKDEDESNFTRSIQNGFWVFVDMASGRYLWRNLREIKKH
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	84
224125870	89	predicted protein [Populus trichocarpa]	0.976	0.921	0.783	4e-30
224144801	89	predicted protein [Populus trichocarpa]	0.976	0.921	0.746	4e-28
255568912	93	conserved hypothetical protein [Ricinus	0.976	0.881	0.678	1e-25
357497355	90	hypothetical protein MTR_6g029390 [Medic	0.964	0.9	0.686	2e-24
225469343	88	PREDICTED: uncharacterized protein LOC10	0.976	0.931	0.678	5e-24
356559553	87	PREDICTED: uncharacterized protein LOC10	0.952	0.919	0.674	4e-23
357495479	85	hypothetical protein MTR_5g098200 [Medic	0.928	0.917	0.65	2e-22
356498803	86	PREDICTED: uncharacterized protein LOC10	0.940	0.918	0.674	4e-22
15238748	76	Methyltransferase-related protein [Arabi	0.880	0.973	0.607	6e-22
297811981	76	hypothetical protein ARALYDRAFT_326229 [	0.880	0.973	0.607	8e-22

>gi|224125870|ref|XP_002319695.1| predicted protein [Populus trichocarpa] gi|222858071|gb|EEE95618.1| predicted protein [Populus trichocarpa]

 Score =  135 bits (339), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 65/83 (78%), Positives = 73/83 (87%), Gaps = 1/83 (1%)

Query: 1  MCPLRFILVFFSAVLAGYFAWRTVRSSPEADINSLSDDSPNDKTSLKDEDESNFTRSIQN 60
          MCPLRFILVFFSAVLAGYFAWRTVRSSPE D + +SDDS  +KTSL+++ E NF R IQN
Sbjct: 1  MCPLRFILVFFSAVLAGYFAWRTVRSSPEID-DFVSDDSTAEKTSLREKQEFNFKRIIQN 59

Query: 61 GFWVFVDMASGRYLWRNLREIKK 83
          GFWVFVDMASGRYLWRN +E+KK
Sbjct: 60 GFWVFVDMASGRYLWRNFKEMKK 82

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224144801|ref|XP_002325419.1| predicted protein [Populus trichocarpa] gi|222862294|gb|EEE99800.1| predicted protein [Populus trichocarpa]

 Score =  128 bits (322), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 62/83 (74%), Positives = 70/83 (84%), Gaps = 1/83 (1%)

Query: 1  MCPLRFILVFFSAVLAGYFAWRTVRSSPEADINSLSDDSPNDKTSLKDEDESNFTRSIQN 60
          MCP RFILVF SAVLAGYFAW+TVRSSPE D + +SDDS  +KTSL+D+ E N  R IQN
Sbjct: 1  MCPFRFILVFLSAVLAGYFAWKTVRSSPEID-DMVSDDSTAEKTSLEDKQEFNSKRMIQN 59

Query: 61 GFWVFVDMASGRYLWRNLREIKK 83
          GFWVFVDMASG YLWRNL+E+KK
Sbjct: 60 GFWVFVDMASGSYLWRNLKEMKK 82

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255568912|ref|XP_002525426.1| conserved hypothetical protein [Ricinus communis] gi|223535239|gb|EEF36916.1| conserved hypothetical protein [Ricinus communis]

 Score =  120 bits (300), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 59/87 (67%), Positives = 72/87 (82%), Gaps = 5/87 (5%)

Query: 1  MCPLRFILVFFSAVLAGYFAWRTVRSSPEADINSLSDDSPNDKTSLKDEDESN----FTR 56
          MCPLRFILVFFSAVLAGYFAWRTVRSSPE +  ++SDDS  +K  L+D++ +N      R
Sbjct: 1  MCPLRFILVFFSAVLAGYFAWRTVRSSPEIE-TTVSDDSTVEKKPLQDDNNNNKVCSAKR 59

Query: 57 SIQNGFWVFVDMASGRYLWRNLREIKK 83
           IQNGFWVFVDMASG+YLWRNL+E+++
Sbjct: 60 IIQNGFWVFVDMASGKYLWRNLKEMRE 86

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357497355|ref|XP_003618966.1| hypothetical protein MTR_6g029390 [Medicago truncatula] gi|355493981|gb|AES75184.1| hypothetical protein MTR_6g029390 [Medicago truncatula] gi|388522841|gb|AFK49482.1| unknown [Medicago truncatula]

 Score =  116 bits (290), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 57/83 (68%), Positives = 66/83 (79%), Gaps = 2/83 (2%)

Query: 1  MCPLRFILVFFSAVLAGYFAWRTVRSSPEADINSLSDDSPNDKTSLKDEDESNFTRSIQN 60
          MCPLRFILVFFSAVLAGYFAWRTVRSSP  D+    DDS  ++ S   +++ +F + IQN
Sbjct: 1  MCPLRFILVFFSAVLAGYFAWRTVRSSPNIDL--ACDDSIEEEKSPFKKEDFDFKKMIQN 58

Query: 61 GFWVFVDMASGRYLWRNLREIKK 83
          GFWVFVDMASGRYLWRNLR+  K
Sbjct: 59 GFWVFVDMASGRYLWRNLRQTNK 81

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225469343|ref|XP_002270086.1| PREDICTED: uncharacterized protein LOC100255594 [Vitis vinifera] gi|296084605|emb|CBI25626.3| unnamed protein product [Vitis vinifera]

 Score =  115 bits (287), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 57/84 (67%), Positives = 66/84 (78%), Gaps = 2/84 (2%)

Query: 1  MCPLRFILVFFSAVLAGYFAWRTVRSSPEADINSLSDDSPNDKTSLKDEDESNFTRSIQN 60
          MCPLRFILVFFSAVLAGYFAWRTVRSS E  ++   +DS  +    KD+ E NF R I++
Sbjct: 1  MCPLRFILVFFSAVLAGYFAWRTVRSSQETGLSL--EDSNLENVPSKDKQELNFKRMIRD 58

Query: 61 GFWVFVDMASGRYLWRNLREIKKH 84
          GFW FVDMASGRYLWRNLRE+K +
Sbjct: 59 GFWGFVDMASGRYLWRNLREMKNN 82

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356559553|ref|XP_003548063.1| PREDICTED: uncharacterized protein LOC100526886 [Glycine max] gi|255631062|gb|ACU15895.1| unknown [Glycine max]

 Score =  112 bits (279), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 56/83 (67%), Positives = 64/83 (77%), Gaps = 3/83 (3%)

Query: 1  MCPLRFILVFFSAVLAGYFAWRTVRSSPEADINSLSDDSPNDKTSLKDEDESNFTRSIQN 60
          MCPLRFILVFFSAVLAGYFAW+TVRS P+ ++   S+DS N+  S K ED  +F + IQN
Sbjct: 1  MCPLRFILVFFSAVLAGYFAWKTVRSDPKIEV--FSEDSANEDKSFKKED-FDFKKMIQN 57

Query: 61 GFWVFVDMASGRYLWRNLREIKK 83
          GFW FVDMASG YLWRNLR   K
Sbjct: 58 GFWGFVDMASGSYLWRNLRPTNK 80

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357495479|ref|XP_003618028.1| hypothetical protein MTR_5g098200 [Medicago truncatula] gi|355519363|gb|AET00987.1| hypothetical protein MTR_5g098200 [Medicago truncatula]

 Score =  109 bits (272), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 52/80 (65%), Positives = 63/80 (78%), Gaps = 2/80 (2%)

Query: 1  MCPLRFILVFFSAVLAGYFAWRTVRSSPEADINSLSDDSPNDKTSLKDEDESNFTRSIQN 60
          MCPLRFILVFFSAVLAGYFAWRTV  SP  D+ S  ++S  +  S   +++ +F + IQN
Sbjct: 1  MCPLRFILVFFSAVLAGYFAWRTVSFSPNIDLAS--NESTEEVRSFLKKEDFDFKKMIQN 58

Query: 61 GFWVFVDMASGRYLWRNLRE 80
          GFWVF+DMASGRYLWRNLR+
Sbjct: 59 GFWVFIDMASGRYLWRNLRQ 78

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356498803|ref|XP_003518238.1| PREDICTED: uncharacterized protein LOC100803573 [Glycine max] gi|255640542|gb|ACU20556.1| unknown [Glycine max]

 Score =  108 bits (271), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 56/83 (67%), Positives = 63/83 (75%), Gaps = 4/83 (4%)

Query: 1  MCPLRFILVFFSAVLAGYFAWRTVRSSPEADINSLSDDSPNDKTSLKDEDESNFTRSIQN 60
          MCPLRFILVFFSAVLAGYFAW+TVRS+P   I   S+DS ++  S K  D  +F + IQN
Sbjct: 1  MCPLRFILVFFSAVLAGYFAWKTVRSNP---IEVFSEDSADEDKSSKKGD-FDFKKMIQN 56

Query: 61 GFWVFVDMASGRYLWRNLREIKK 83
          GFW FVDMASGRYLWRNLR   K
Sbjct: 57 GFWGFVDMASGRYLWRNLRSTNK 79

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15238748|ref|NP_197316.1| Methyltransferase-related protein [Arabidopsis thaliana] gi|9758897|dbj|BAB09473.1| unnamed protein product [Arabidopsis thaliana] gi|26452603|dbj|BAC43385.1| unknown protein [Arabidopsis thaliana] gi|28973485|gb|AAO64067.1| unknown protein [Arabidopsis thaliana] gi|332005130|gb|AED92513.1| Methyltransferase-related protein [Arabidopsis thaliana]

 Score =  108 bits (269), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 51/84 (60%), Positives = 65/84 (77%), Gaps = 10/84 (11%)

Query: 1  MCPLRFILVFFSAVLAGYFAWRTVRSSPEADINSLSDDSPNDKTSLKDEDESNFTRSIQN 60
          MCP+RF+LVFFSAVLAGYFAW+TV SSPE        DSP++   L ++ E N  + ++N
Sbjct: 1  MCPMRFLLVFFSAVLAGYFAWKTVSSSPEF-------DSPDE---LNEKQELNLKKKMEN 50

Query: 61 GFWVFVDMASGRYLWRNLREIKKH 84
          GFWVFVDMASGRYLWRNL+E+++ 
Sbjct: 51 GFWVFVDMASGRYLWRNLKEMREK 74

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297811981|ref|XP_002873874.1| hypothetical protein ARALYDRAFT_326229 [Arabidopsis lyrata subsp. lyrata] gi|297319711|gb|EFH50133.1| hypothetical protein ARALYDRAFT_326229 [Arabidopsis lyrata subsp. lyrata]

 Score =  107 bits (268), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 51/84 (60%), Positives = 65/84 (77%), Gaps = 10/84 (11%)

Query: 1  MCPLRFILVFFSAVLAGYFAWRTVRSSPEADINSLSDDSPNDKTSLKDEDESNFTRSIQN 60
          MCP+RF+LVFFSAVLAGYFAW+TV SSPE        DSP++   L ++ E N  + ++N
Sbjct: 1  MCPMRFLLVFFSAVLAGYFAWKTVSSSPEF-------DSPDE---LNEKQELNLKQKMEN 50

Query: 61 GFWVFVDMASGRYLWRNLREIKKH 84
          GFWVFVDMASGRYLWRNL+E+++ 
Sbjct: 51 GFWVFVDMASGRYLWRNLKEMREK 74

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	84
TAIR|locus:2172384	76	AT5G18150 "AT5G18150" [Arabido	0.869	0.960	0.614	6.1e-23
TAIR|locus:4515103566	80	AT5G14602 "AT5G14602" [Arabido	0.916	0.962	0.578	6.3e-21
TAIR|locus:505006699	85	AT5G58375 "AT5G58375" [Arabido	0.880	0.870	0.456	1.3e-13

TAIR|locus:2172384 AT5G18150 "AT5G18150" [Arabidopsis thaliana (taxid:3702)]

 Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
 Identities = 51/83 (61%), Positives = 65/83 (78%)

Query:     1 MCPLRFILVFFSAVLAGYFAWRTVRSSPEADINSLSDDSPNDKTSLKDEDESNFTRSIQN 60
             MCP+RF+LVFFSAVLAGYFAW+TV SSPE D       SP++   L ++ E N  + ++N
Sbjct:     1 MCPMRFLLVFFSAVLAGYFAWKTVSSSPEFD-------SPDE---LNEKQELNLKKKMEN 50

Query:    61 GFWVFVDMASGRYLWRNLREIKK 83
             GFWVFVDMASGRYLWRNL+E+++
Sbjct:    51 GFWVFVDMASGRYLWRNLKEMRE 73

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0010200 "response to chitin" evidence=RCA

TAIR|locus:4515103566 AT5G14602 "AT5G14602" [Arabidopsis thaliana (taxid:3702)]

 Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
 Identities = 48/83 (57%), Positives = 58/83 (69%)

Query:     1 MCPLRFILVFFSAVLAGYFAWRTVRSSPEADINSLSDDSPNDKTSLKDEDESNFTRSIQN 60
             MCPLRF+LVFFSAVLAGY AWRTV S+PE   + L      +K  L      +F R + N
Sbjct:     1 MCPLRFVLVFFSAVLAGYIAWRTVNSTPELFSDELLQAEAKEKQGL------DFKRKMDN 54

Query:    61 GFWVFVDMASGRYLWRNLREIKK 83
             G W FVDMASGRYLWRNL+E+++
Sbjct:    55 GLWTFVDMASGRYLWRNLKEMRQ 77

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:505006699 AT5G58375 "AT5G58375" [Arabidopsis thaliana (taxid:3702)]

 Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
 Identities = 37/81 (45%), Positives = 51/81 (62%)

Query:     1 MCPLRFILVFFSAVLAGYFAWRTVRSSPEADINSLSDDSPNDKTSLKDEDESNFTR---S 57
             MCPLR IL+F SA LAG+F  + + S+ +  +    DDS  D     D+  S F++   +
Sbjct:     1 MCPLRLILIFLSATLAGFFVLQKLNSTSDDPL----DDSFTDAEHADDDSVSGFSKVGMA 56

Query:    58 IQNGFWVFVDMASGRYLWRNL 78
             +++GFW  VDMASGRYLW NL
Sbjct:    57 MKSGFWTCVDMASGRYLWNNL 77


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.135   0.426    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       84        84   0.00091  102 3  11 22  0.40    29
                                                     29  0.45    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  555 (59 KB)
  Total size of DFA:  113 KB (2075 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.17u 0.18s 12.35t   Elapsed:  00:00:00
  Total cpu time:  12.17u 0.18s 12.35t   Elapsed:  00:00:00
  Start:  Fri May 10 01:02:17 2013   End:  Fri May 10 01:02:17 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	84
PF06679	163	DUF1180: Protein of unknown function (DUF1180); In	84.43

>PF06679 DUF1180: Protein of unknown function (DUF1180); InterPro: IPR009565 This entry consists of several hypothetical eukaryotic proteins thought to be membrane proteins

Probab=84.43  E-value=0.94  Score=33.33  Aligned_cols=22  Identities=41%  Similarity=0.534  Sum_probs=19.8

Q ss_pred             HHHHHHHHHHHHHHHHHhccCC
Q 034767            6 FILVFFSAVLAGYFAWRTVRSS   27 (84)
Q Consensus         6 ~ILiflSA~lAGyfa~r~l~s~   27 (84)
                      .||+.||+.+..||++|.+|..
T Consensus        99 ~Vl~g~s~l~i~yfvir~~R~r  120 (163)
T PF06679_consen   99 YVLVGLSALAILYFVIRTFRLR  120 (163)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhc
Confidence            5788999999999999999776

Their function is unknown.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00