Citrus Sinensis ID: 034773

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80----
Protein Sequence
MEKSKSFSGNPSSCFDAQFGFEDRSKSYSFNGPTGKADVLASSGNPESKRRKRVAAYNMYTMEGKLKSSLRNSFKWIKNKFTDD
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHEEEEEEEccccHHHHHcccEEEccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHEEEEEEEccEHHHHHHHHHHHHHccccc
Coil and Loop (DISEMBL)
meksksfsgnpsscfdaqfgfedrsksysfngptgkadvlassgnpeskrRKRVAAYNMYTMEGKLKSSLRNSFKWIKNKFTDD
Flexible Loop (DISEMBL)
meksksfsgnpssCFDAQFGFEDRSKSYSfngptgkadvlassgnpeskrrkrVAAYNMYTmegklksslrnsfkwiknkftdd
Low Complexity Region (SEG)
MEKSKSFSGNPSSCFDAQFGFEDRSKSYSFNGPTGKADVLASSGNPESKRRKRVAAYNMYTMEGKLKSSLRNSFKWIKNKFTDD
Disordered region (IsUnstruct)
********************************************************YNMYT************FKWI*******
Disordered Region (DISOPRED)
*************************************************RRKRVAAYNMYTMEGKLKSSLRNSFKWIKNKF***
Disordered Region (DISEMBL)
**********PSSCFDAQFGFEDRSKSYSFNGPTGKADV************KRVAAYNMYTMEGKLKSSLRNSFKWIKNKFTDD
Disordered Region (DISPRO)
*******************************************GNPESKRRKRVAAYNMYTMEGKLKSSLRNSFKWIKNKF***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MEKSKSFSGNPSSCFDAQFGFEDRSKSYSFNGPTGKADVLASSGNPESKRRKRVAAYNMYTMEGKLKSSLRNSFKWIKNKFTDD
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	84
359480865	678	PREDICTED: uncharacterized protein LOC10	1.0	0.123	0.761	6e-29
147794450	210	hypothetical protein VITISV_030491 [Viti	1.0	0.4	0.761	2e-28
255578811	88	conserved hypothetical protein [Ricinus	1.0	0.954	0.776	1e-27
224096448	90	predicted protein [Populus trichocarpa]	1.0	0.933	0.720	8e-26
224082498	87	predicted protein [Populus trichocarpa]	0.976	0.942	0.650	1e-21
356518728	91	PREDICTED: uncharacterized protein LOC10	0.964	0.890	0.666	5e-21
224066609	87	predicted protein [Populus trichocarpa]	0.976	0.942	0.638	1e-20
359493151	87	PREDICTED: uncharacterized protein LOC10	0.976	0.942	0.602	9e-20
296081211	114	unnamed protein product [Vitis vinifera]	0.976	0.719	0.602	1e-19
356576077	86	PREDICTED: uncharacterized protein LOC10	0.964	0.941	0.602	2e-19

>gi|359480865|ref|XP_002275413.2| PREDICTED: uncharacterized protein LOC100254360 [Vitis vinifera]

 Score =  131 bits (329), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 64/84 (76%), Positives = 70/84 (83%)

Query: 1   MEKSKSFSGNPSSCFDAQFGFEDRSKSYSFNGPTGKADVLASSGNPESKRRKRVAAYNMY 60
           MEKS+SF  +P S  DA+ GFE RS SYSFNGP GK D  A+S NPE KRRKRVA+YNMY
Sbjct: 590 MEKSRSFPDHPYSYSDARHGFELRSNSYSFNGPIGKVDEFATSDNPEMKRRKRVASYNMY 649

Query: 61  TMEGKLKSSLRNSFKWIKNKFTDD 84
           +MEGKLKSSLRNSFKWIKNKFTDD
Sbjct: 650 SMEGKLKSSLRNSFKWIKNKFTDD 673

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147794450|emb|CAN64856.1| hypothetical protein VITISV_030491 [Vitis vinifera]

 Score =  129 bits (324), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 64/84 (76%), Positives = 70/84 (83%)

Query: 1   MEKSKSFSGNPSSCFDAQFGFEDRSKSYSFNGPTGKADVLASSGNPESKRRKRVAAYNMY 60
           MEKS+SF  +P S  DA+ GFE RS SYSFNGP GK D  A+S NPE KRRKRVA+YNMY
Sbjct: 122 MEKSRSFPDHPYSYSDARHGFELRSNSYSFNGPIGKVDEFATSDNPEMKRRKRVASYNMY 181

Query: 61  TMEGKLKSSLRNSFKWIKNKFTDD 84
           +MEGKLKSSLRNSFKWIKNKFTDD
Sbjct: 182 SMEGKLKSSLRNSFKWIKNKFTDD 205

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255578811|ref|XP_002530262.1| conserved hypothetical protein [Ricinus communis] gi|223530228|gb|EEF32132.1| conserved hypothetical protein [Ricinus communis]

 Score =  127 bits (318), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 66/85 (77%), Positives = 71/85 (83%), Gaps = 1/85 (1%)

Query: 1  MEKSKSFSGNPSSCFDAQFGFEDRSKSYSFNGPT-GKADVLASSGNPESKRRKRVAAYNM 59
          MEKSKSFSG  +   + +  FEDRSKSYSFNGPT GK D LASSGNPE KRR+RVA YNM
Sbjct: 1  MEKSKSFSGYSNPYSEIRLEFEDRSKSYSFNGPTTGKMDELASSGNPEVKRRRRVAQYNM 60

Query: 60 YTMEGKLKSSLRNSFKWIKNKFTDD 84
          YTMEGKLKSSLRNSFKWIK+KF DD
Sbjct: 61 YTMEGKLKSSLRNSFKWIKSKFVDD 85

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224096448|ref|XP_002310621.1| predicted protein [Populus trichocarpa] gi|222853524|gb|EEE91071.1| predicted protein [Populus trichocarpa]

 Score =  120 bits (302), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 62/86 (72%), Positives = 69/86 (80%), Gaps = 2/86 (2%)

Query: 1  MEKSKSFSGNPSSCFDAQFGFEDRSKSYSFNGPTGKAD--VLASSGNPESKRRKRVAAYN 58
          MEKSKSFSG  ++  + + GFE+RS SYSFNGP GK D   L SSGNPE KRRKRVA YN
Sbjct: 1  MEKSKSFSGYSNAYSEIRLGFEERSGSYSFNGPAGKVDDVELESSGNPELKRRKRVAQYN 60

Query: 59 MYTMEGKLKSSLRNSFKWIKNKFTDD 84
          MYTMEGK+KSSLRNSFKWIK+K  DD
Sbjct: 61 MYTMEGKIKSSLRNSFKWIKSKLVDD 86

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224082498|ref|XP_002306717.1| predicted protein [Populus trichocarpa] gi|222856166|gb|EEE93713.1| predicted protein [Populus trichocarpa]

 Score =  107 bits (267), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 54/83 (65%), Positives = 68/83 (81%), Gaps = 1/83 (1%)

Query: 1  MEKSKSFSGNPSSCFDAQFGFEDRSKSYSFNGPTGKADVLASSGNPESKRRKRVAAYNMY 60
          MEKSKSF    SS F  +FGFEDRS SY+FNGP  K +  A+S +PE KR+KR+A+YN++
Sbjct: 1  MEKSKSFP-QYSSSFSGEFGFEDRSNSYNFNGPCQKGNGFATSSDPELKRKKRIASYNVF 59

Query: 61 TMEGKLKSSLRNSFKWIKNKFTD 83
          TMEGKLKS++RNSFKWIK+KF+D
Sbjct: 60 TMEGKLKSNVRNSFKWIKSKFSD 82

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356518728|ref|XP_003528030.1| PREDICTED: uncharacterized protein LOC100795724 [Glycine max]

 Score =  105 bits (261), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 3/84 (3%)

Query: 1  MEKSKSFSG--NPSSCFDAQFGFEDRSKSYSFNGP-TGKADVLASSGNPESKRRKRVAAY 57
          MEK K FS   + SS  D + G EDR+ SYSFNGP + K DVLA++GNPE KRRKRVA+Y
Sbjct: 1  MEKGKPFSAYHHSSSYHDFRAGLEDRTTSYSFNGPRSSKRDVLATNGNPELKRRKRVASY 60

Query: 58 NMYTMEGKLKSSLRNSFKWIKNKF 81
          NMYT+E KLKSS R+SFKWIKNK 
Sbjct: 61 NMYTIEAKLKSSFRSSFKWIKNKL 84

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224066609|ref|XP_002302161.1| predicted protein [Populus trichocarpa] gi|118482032|gb|ABK92947.1| unknown [Populus trichocarpa] gi|222843887|gb|EEE81434.1| predicted protein [Populus trichocarpa]

 Score =  103 bits (258), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 53/83 (63%), Positives = 67/83 (80%), Gaps = 1/83 (1%)

Query: 1  MEKSKSFSGNPSSCFDAQFGFEDRSKSYSFNGPTGKADVLASSGNPESKRRKRVAAYNMY 60
          MEKSKSF    SS F  +FGFED+S SY+FNGP  K +  A+S +PE KR+KR+A+YN++
Sbjct: 1  MEKSKSFP-QYSSFFSGEFGFEDQSNSYNFNGPCQKGNGFATSSDPELKRKKRIASYNVF 59

Query: 61 TMEGKLKSSLRNSFKWIKNKFTD 83
          T+EGKLKSS RNSFKWIK+KF+D
Sbjct: 60 TVEGKLKSSARNSFKWIKSKFSD 82

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359493151|ref|XP_003634523.1| PREDICTED: uncharacterized protein LOC100854843 [Vitis vinifera]

 Score =  100 bits (250), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 50/83 (60%), Positives = 64/83 (77%), Gaps = 1/83 (1%)

Query: 1  MEKSKSFSGNPSSCFDAQFGFEDRSKSYSFNGPTGKADVLASSGNPESKRRKRVAAYNMY 60
          MEKS+SF    SS +  +FGF DRS SYSFNGP  K    A+S +PE KR+KR+A+YN++
Sbjct: 1  MEKSRSFP-EYSSSYAGEFGFHDRSNSYSFNGPCNKGSGFATSNDPELKRKKRIASYNVF 59

Query: 61 TMEGKLKSSLRNSFKWIKNKFTD 83
          TMEGKLK+S+R+SFKWIK K +D
Sbjct: 60 TMEGKLKTSVRSSFKWIKTKLSD 82

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296081211|emb|CBI18237.3| unnamed protein product [Vitis vinifera]

 Score =  100 bits (250), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 50/83 (60%), Positives = 64/83 (77%), Gaps = 1/83 (1%)

Query: 1  MEKSKSFSGNPSSCFDAQFGFEDRSKSYSFNGPTGKADVLASSGNPESKRRKRVAAYNMY 60
          MEKS+SF    SS +  +FGF DRS SYSFNGP  K    A+S +PE KR+KR+A+YN++
Sbjct: 1  MEKSRSFP-EYSSSYAGEFGFHDRSNSYSFNGPCNKGSGFATSNDPELKRKKRIASYNVF 59

Query: 61 TMEGKLKSSLRNSFKWIKNKFTD 83
          TMEGKLK+S+R+SFKWIK K +D
Sbjct: 60 TMEGKLKTSVRSSFKWIKTKLSD 82

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356576077|ref|XP_003556161.1| PREDICTED: uncharacterized protein LOC100776380 [Glycine max]

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 50/83 (60%), Positives = 64/83 (77%), Gaps = 2/83 (2%)

Query: 1  MEKSKSFSGNPSSCFDAQFGFEDRSKSYSFNGPTGKADVLASSGNPESKRRKRVAAYNMY 60
          MEKSKSF     SC   +FGF +RS SY+FNGP  K +  ++S +PE KR+KR+ AYN+ 
Sbjct: 1  MEKSKSFP--EYSCSYTEFGFSERSNSYNFNGPNQKGNGFSASSDPELKRKKRIKAYNVL 58

Query: 61 TMEGKLKSSLRNSFKWIKNKFTD 83
          T+EGKLK+S+RNSFKWIKNKF+D
Sbjct: 59 TVEGKLKTSVRNSFKWIKNKFSD 81

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	84
TAIR|locus:2140598	87	AT4G09890 "AT4G09890" [Arabido	0.916	0.885	0.517	1.4e-16
TAIR|locus:2143059	105	AT5G11970 "AT5G11970" [Arabido	0.452	0.361	0.578	5.9e-09
TAIR|locus:2047700	116	AT2G19460 "AT2G19460" [Arabido	0.595	0.431	0.5	1.6e-08
TAIR|locus:2062018	110	AT2G47480 "AT2G47480" [Arabido	0.404	0.309	0.647	1.6e-08
TAIR|locus:2088227	102	AT3G13910 "AT3G13910" [Arabido	0.845	0.696	0.379	4.2e-08
TAIR|locus:1006230186	124	AT3G05725 "AT3G05725" [Arabido	0.404	0.274	0.588	3.8e-07
TAIR|locus:2081630	110	AT3G62640 "AT3G62640" [Arabido	0.607	0.463	0.388	7.8e-07
TAIR|locus:2030295	127	AT1G72720 "AT1G72720" [Arabido	0.380	0.251	0.562	2.6e-06

TAIR|locus:2140598 AT4G09890 "AT4G09890" [Arabidopsis thaliana (taxid:3702)]

 Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
 Identities = 44/85 (51%), Positives = 59/85 (69%)

Query:     1 MEKSKSFSGNPSSCFDAQFGFE-DRSKSYSFNGPTGKADVLASSGNPESKRRKRVAAYNM 59
             M+ SKS++   SS    +FG++ +RS SY+FNGP    D       PE KR+KRVA+YN+
Sbjct:     2 MKGSKSYTEYSSSFSTDEFGYDQNRSNSYNFNGPCINTD-------PEMKRKKRVASYNL 54

Query:    60 YTMEGKLKSSLRNSFKWIKNKFTDD 84
             +  E KLKS+L+NSFKWIKNKF+ D
Sbjct:    55 FATEEKLKSTLKNSFKWIKNKFSGD 79

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2143059 AT5G11970 "AT5G11970" [Arabidopsis thaliana (taxid:3702)]

 Score = 133 (51.9 bits), Expect = 5.9e-09, P = 5.9e-09
 Identities = 22/38 (57%), Positives = 32/38 (84%)

Query:    45 NPESKRRKRVAAYNMYTMEGKLKSSLRNSFKWIKNKFT 82
             +PE +R+KRVA+Y MY +EGK+K S RNSF+W+K ++T
Sbjct:    61 DPELQRKKRVASYKMYGVEGKVKGSFRNSFRWLKQRYT 98

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2047700 AT2G19460 "AT2G19460" [Arabidopsis thaliana (taxid:3702)]

 Score = 129 (50.5 bits), Expect = 1.6e-08, P = 1.6e-08
 Identities = 26/52 (50%), Positives = 36/52 (69%)

Query:    31 NGPTGKADVLASSG--NPESKRRKRVAAYNMYTMEGKLKSSLRNSFKWIKNK 80
             N   G++   +S G  +P+ +R+KRV +Y  YT+EGKLK S R SFKWIK+K
Sbjct:    59 NPKKGRSSSSSSWGFVDPDLQRKKRVVSYRAYTVEGKLKGSFRKSFKWIKDK 110

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2062018 AT2G47480 "AT2G47480" [Arabidopsis thaliana (taxid:3702)]

 Score = 129 (50.5 bits), Expect = 1.6e-08, P = 1.6e-08
 Identities = 22/34 (64%), Positives = 29/34 (85%)

Query:    47 ESKRRKRVAAYNMYTMEGKLKSSLRNSFKWIKNK 80
             E KR+KR+A Y  YT+EGK+KS+L+N F+WIKNK
Sbjct:    69 EMKRKKRIARYKAYTVEGKVKSTLKNGFRWIKNK 102

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2088227 AT3G13910 "AT3G13910" [Arabidopsis thaliana (taxid:3702)]

 Score = 125 (49.1 bits), Expect = 4.2e-08, P = 4.2e-08
 Identities = 30/79 (37%), Positives = 43/79 (54%)

Query:     9 GNPSSCFDAQFGFEDRSKSYSFNGPTGK----ADVLASSG----NPESKRRKRVAAYNMY 60
             G  S  FD   G + ++  Y       K    AD  AS      +PES+R++RVA Y +Y
Sbjct:    19 GYNSGSFDDSAGDQSQTNDYQLKIKKSKSVPNADRAASRSWSFSDPESRRKRRVAGYKVY 78

Query:    61 TMEGKLKSSLRNSFKWIKN 79
             ++E K+K S+R SFKW K+
Sbjct:    79 SVEQKMKGSIRKSFKWFKD 97

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:1006230186 AT3G05725 "AT3G05725" [Arabidopsis thaliana (taxid:3702)]

 Score = 116 (45.9 bits), Expect = 3.8e-07, P = 3.8e-07
 Identities = 20/34 (58%), Positives = 28/34 (82%)

Query:    45 NPESKRRKRVAAYNMYTMEGKLKSSLRNSFKWIK 78
             +PE KR++RVA Y +Y+ EGK+K +LR S+KWIK
Sbjct:    81 DPEIKRKRRVAKYKLYSAEGKMKITLRKSYKWIK 114

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2081630 AT3G62640 "AT3G62640" [Arabidopsis thaliana (taxid:3702)]

 Score = 113 (44.8 bits), Expect = 7.8e-07, P = 7.8e-07
 Identities = 21/54 (38%), Positives = 35/54 (64%)

Query:    32 GPTGKADVLASSG---NPESKRRKRVAAYNMYTMEGKLKSSLRNSFKWIKNKFT 82
             G T K    A+     + E+KR+KR+A Y  Y +EGK+KS+++  F WIK++++
Sbjct:    52 GSTSKTRTTATPWRLIDAETKRKKRIATYKTYALEGKVKSTVKKGFHWIKDRYS 105

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

TAIR|locus:2030295 AT1G72720 "AT1G72720" [Arabidopsis thaliana (taxid:3702)]

 Score = 108 (43.1 bits), Expect = 2.6e-06, P = 2.6e-06
 Identities = 18/32 (56%), Positives = 27/32 (84%)

Query:    47 ESKRRKRVAAYNMYTMEGKLKSSLRNSFKWIK 78
             E +R+KRVA+YN+Y +EG++K S++ SFKW K
Sbjct:    85 EIQRKKRVASYNVYGVEGRVKGSMKKSFKWFK 116


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.311   0.126   0.363    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       84        84   0.00091  102 3  11 23  0.49    29
                                                     29  0.45    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  8
  No. of states in DFA:  508 (54 KB)
  Total size of DFA:  99 KB (2071 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.00u 0.14s 11.14t   Elapsed:  00:00:01
  Total cpu time:  11.00u 0.14s 11.14t   Elapsed:  00:00:01
  Start:  Fri May 10 01:06:38 2013   End:  Fri May 10 01:06:39 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	84
pfam12023	47	pfam12023, DUF3511, Domain of unknown function (DU	1e-16

>gnl|CDD|204810 pfam12023, DUF3511, Domain of unknown function (DUF3511)

 Score = 66.2 bits (162), Expect = 1e-16
 Identities = 25/40 (62%), Positives = 32/40 (80%)

Query: 44 GNPESKRRKRVAAYNMYTMEGKLKSSLRNSFKWIKNKFTD 83
           +PE KRR+RVAAY  Y +EGK+K+SLR SFKWIK+K + 
Sbjct: 4  SDPEMKRRRRVAAYKAYAVEGKVKASLRKSFKWIKDKCSH 43

This presumed domain is functionally uncharacterized. This domain is found in eukaryotes. This domain is about 50 amino acids in length. This domain has two completely conserved residues (Y and K) that may be functionally important. Length = 47

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	84
PF12023	47	DUF3511: Domain of unknown function (DUF3511); Int	99.95

>PF12023 DUF3511: Domain of unknown function (DUF3511); InterPro: IPR021899 This presumed domain is functionally uncharacterised

Probab=99.95  E-value=3.7e-30  Score=158.26  Aligned_cols=44  Identities=55%  Similarity=0.904  Sum_probs=42.3

Q ss_pred             cCCCChhhhhhhhhceeeeeeecchhhhhhhccceehhccccCC
Q 034773           41 ASSGNPESKRRKRVAAYNMYTMEGKLKSSLRNSFKWIKNKFTDD   84 (84)
Q Consensus        41 ~~~~dpE~kRkkRVA~Yk~Y~vEGKvK~S~R~sfrWiK~k~~~~   84 (84)
                      |+++|||||||||||+||+|+||||||+|||+||||||++|+++
T Consensus         1 w~~~dpE~kRkkRVA~Yk~y~vEGKvK~S~R~sfrWiK~k~s~i   44 (47)
T PF12023_consen    1 WGFNDPEMKRKKRVASYKVYAVEGKVKGSLRKSFRWIKNKCSRI   44 (47)
T ss_pred             CCCCCHHHHHHHHHHhhheeeeehHHHHHHHhhhHHHHHHhhHh
Confidence            67899999999999999999999999999999999999999975

This domain is found in eukaryotes. This domain is about 50 amino acids in length. This domain has two completely conserved residues (Y and K) that may be functionally important.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00