Citrus Sinensis ID: 036241

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------
MILKDGAACLRNLIHLFRPASSSLTSKLGACYFCTSHVASLQQPGKPSVFSSDDEYADLDWDNLGFSIKPADYMYTMKCSKHENFKQGQLSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSPSVDQFVDAVKQIALANKRWVPPPGKGTLYIRPLLIGSGPVLGLGPAPEYTFLAYASPVGNYFKEGSAPLNLYIEEEFVRAAPGGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPVDELINADQVFCTGTAVVVAPVGSITYQNKRVEFKTGSRSVYQE
ccccccHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEcccccccccEEEEccccccccccccHHHHHHHHHccccEEcccccEEEEcHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHccccccccccccEEEccEEEEEcccccccccccEEEEEEEEccccccccccccEEEEEEccEEEcccccccccccccccHHHHHHHHHHHHccccEEEEEccccccEEEEccccEEEEEEccEEEcccccccccccccHHHHHHHHHHccccEEEEEEccccccccccccccccEEEEcccEEEEEccEEEEEcccccccccc
cHHHHHHHHHHHHcccccccHHHHHHHHcccccccccccccccccccccccccHHHccccHHccccccccccEEEEEEEcccccccccEEEEcccEEEcccEHHHHcccEEEccEEEEEEcccEEEEEcHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcHHHcccccccEEEEEEEEEEccEcccccccccEEEEEEEEEEccccHHHcccEEEEEEccEEEEccccccccEccccHHHHHHHHHHHHHccccEEEEEcccccEEEEEEcccEEEEEEccEEEEccHHHcccccHHHHHHHHHHHHccccEEEcccEccHHHHccEEEEEEcccEEEEEEEEEEcccEEEEccccEHHccc
MILKDGAACLRNLIHlfrpasssltsklgacyFCTShvaslqqpgkpsvfssddeyadldwdnlgfsikpadymytmkcskhenfkqgqlsryanielspsaavlnygqgvyegtkayrtedgrillfrpdlnasrmkigaermcmpspsvdQFVDAVKQIALAnkrwvpppgkgtlyirplligsgpvlglgpapeytflayaspvgnyfkegsaplnlyieeefvraapggaggvkaISNYAPVLKALIRAKSRGFSDVLYLdsvnrknveevsscNIFVVKgnvistpatngtilegitRRSVIEIARDYgyqveervipvdelinadqvfcTGTAVVvapvgsityqnkrvefktgsrsvyqe
MILKDGAACLRNLIHLFRPASSSLTSKLGACYFCTSHVaslqqpgkpSVFSSDDEYADLDWDNLGFSIKPADYMYTMKCSKHENFKQGQLSRYANIELSPSAAVLNYGQGVYEGtkayrtedgrillfrpdLNASRMKIGAERMCMPSPSVDQFVDAVKQIALankrwvpppgkGTLYIRPLLIGSGPVLGLGPAPEYTFLAYASPVGNYFKEGSAPLNLYIEEEFVRAAPGGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVnrknveevsscnifvvkgnvistpatngtilegitrrsVIEIARDYGYQVEERVIPVDELINADQVFCTGTAVVVapvgsityqnkrvefktgsrsvyqe
MILKDGAACLRNLIHLFRPASSSLTSKLGACYFCTSHVASLQQPGKPSVFSSDDEYADLDWDNLGFSIKPADYMYTMKCSKHENFKQGQLSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSPSVDQFVDAVKQIALANKRWVPPPGKGTLYIRPLLIGSGPVLGLGPAPEYTFLAYASPVGNYFKEGSAPLNLYIEEEFVRAAPGGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPVDELINADQVFCTGTAVVVAPVGSITYQNKRVEFKTGSRSVYQE
*****GAACLRNLIHLFRPASSSLTSKLGACYFCTSHVASL************DEYADLDWDNLGFSIKPADYMYTMKCSKHENFKQGQLSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSPSVDQFVDAVKQIALANKRWVPPPGKGTLYIRPLLIGSGPVLGLGPAPEYTFLAYASPVGNYFKEGSAPLNLYIEEEFVRAAPGGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPVDELINADQVFCTGTAVVVAPVGSITYQNKRVE***********
************************************************************WDNLGFSIKPADYMYTMKCSKHENFKQGQLSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSPSVDQFVDAVKQIALANKRWVPPPGKGTLYIRPLLIGSGPVLGLGPAPEYTFLAYASPVGNYFKEGSAPLNLYIEEEFVRAAPGGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPVDELINADQVFCTGTAVVVAPVGSITYQNKRVEFKT********
MILKDGAACLRNLIHLFRPASSSLTSKLGACYFCTSHVASLQQPGKPSVFSSDDEYADLDWDNLGFSIKPADYMYTMKCSKHENFKQGQLSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSPSVDQFVDAVKQIALANKRWVPPPGKGTLYIRPLLIGSGPVLGLGPAPEYTFLAYASPVGNYFKEGSAPLNLYIEEEFVRAAPGGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPVDELINADQVFCTGTAVVVAPVGSITYQNKRVEFK*********
MILKDGAACLRNLIHLFRPASSSLT*******F**********************YADLDWDNLGFSIKPADYMYTMKCSKHENFKQGQLSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSPSVDQFVDAVKQIALANKRWVPPPGKGTLYIRPLLIGSGPVLGLGPAPEYTFLAYASPVGNYFKEGSAPLNLYIEEEFVRAAPGGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPVDELINADQVFCTGTAVVVAPVGSITYQNKRVEFKTGSRSVY**
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooo
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MILKDGAACLRNLIHLFRPASSSLTSKLGACYFCTSHVASLQQPGKPSVFSSDDEYADLDWDNLGFSIKPADYMYTMKCSKHENFKQGQLSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSPSVDQFVDAVKQIALANKRWVPPPGKGTLYIRPLLIGSGPVLGLGPAPEYTFLAYASPVGNYFKEGSAPLNLYIEEEFVRAAPGGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPVDELINADQVFCTGTAVVVAPVGSITYQNKRVEFKTGSRSVYQE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query367 2.2.26 [Sep-21-2011]
Q9M439388 Branched-chain-amino-acid yes no 0.920 0.871 0.751 1e-150
Q93Y32384 Branched-chain-amino-acid no no 0.978 0.934 0.618 1e-128
Q9M401413 Branched-chain-amino-acid no no 0.836 0.743 0.672 1e-125
Q9FYA6415 Branched-chain-amino-acid no no 0.907 0.802 0.622 1e-124
Q9LPM8367 Putative branched-chain-a no no 0.871 0.871 0.594 1e-116
Q9LPM9356 Branched-chain-amino-acid no no 0.850 0.876 0.591 1e-115
Q9LE06354 Methionine aminotransfera no no 0.850 0.881 0.571 1e-110
P39576363 Branched-chain-amino-acid yes no 0.820 0.829 0.407 4e-66
O31461356 Branched-chain-amino-acid no no 0.806 0.831 0.425 3e-63
O86505362 Probable branched-chain-a yes no 0.822 0.834 0.408 7e-62
>sp|Q9M439|BCAT2_ARATH Branched-chain-amino-acid aminotransferase 2, chloroplastic OS=Arabidopsis thaliana GN=BCAT2 PE=1 SV=1 Back     alignment and function desciption
 Score =  531 bits (1369), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 254/338 (75%), Positives = 288/338 (85%)

Query: 30  ACYFCTSHVASLQQPGKPSVFSSDDEYADLDWDNLGFSIKPADYMYTMKCSKHENFKQGQ 89
           A Y   +  A  ++  KP   + DD YADLDWDNLGF + PADYMY MKCSK   F QG+
Sbjct: 27  AKYNAQAASALREERKKPLYQNGDDVYADLDWDNLGFGLNPADYMYVMKCSKDGEFTQGE 86

Query: 90  LSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSP 149
           LS Y NI+LSPSA VLNYGQ +YEGTKAYR E+G++LLFRPD NA RMK+GAERM MPSP
Sbjct: 87  LSPYGNIQLSPSAGVLNYGQAIYEGTKAYRKENGKLLLFRPDHNAIRMKLGAERMLMPSP 146

Query: 150 SVDQFVDAVKQIALANKRWVPPPGKGTLYIRPLLIGSGPVLGLGPAPEYTFLAYASPVGN 209
           SVDQFV+AVKQ ALANKRWVPP GKGTLYIRPLL+GSGP+LGLGPAPEYTF+ YASPVGN
Sbjct: 147 SVDQFVNAVKQTALANKRWVPPAGKGTLYIRPLLMGSGPILGLGPAPEYTFIVYASPVGN 206

Query: 210 YFKEGSAPLNLYIEEEFVRAAPGGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNR 269
           YFKEG A LNLY+EEE+VRAAPGGAGGVK+I+NYAPVLKAL RAKSRGFSDVLYLDSV +
Sbjct: 207 YFKEGMAALNLYVEEEYVRAAPGGAGGVKSITNYAPVLKALSRAKSRGFSDVLYLDSVKK 266

Query: 270 KNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPVDELIN 329
           K +EE SSCN+FVVKG  ISTPATNGTILEGITR+SV+EIA D GYQV E+ + VDE+++
Sbjct: 267 KYLEEASSCNVFVVKGRTISTPATNGTILEGITRKSVMEIASDQGYQVVEKAVHVDEVMD 326

Query: 330 ADQVFCTGTAVVVAPVGSITYQNKRVEFKTGSRSVYQE 367
           AD+VFCTGTAVVVAPVG+ITYQ KRVE+KTG  SV Q+
Sbjct: 327 ADEVFCTGTAVVVAPVGTITYQEKRVEYKTGDESVCQK 364
Converts 2-oxo acids to branched-chain amino acids. Acts on leucine, isoleucine and valine.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 6EC: .EC: 1EC: .EC: 4EC: 2
>sp|Q93Y32|BCAT1_ARATH Branched-chain-amino-acid aminotransferase 1, mitochondrial OS=Arabidopsis thaliana GN=BCAT1 PE=1 SV=2 Back     alignment and function description
>sp|Q9M401|BCAT3_ARATH Branched-chain-amino-acid aminotransferase 3, chloroplastic OS=Arabidopsis thaliana GN=BCAT3 PE=1 SV=1 Back     alignment and function description
>sp|Q9FYA6|BCAT5_ARATH Branched-chain-amino-acid aminotransferase 5, chloroplastic OS=Arabidopsis thaliana GN=BCAT5 PE=1 SV=1 Back     alignment and function description
>sp|Q9LPM8|BCAT7_ARATH Putative branched-chain-amino-acid aminotransferase 7 OS=Arabidopsis thaliana GN=BCAT7 PE=5 SV=1 Back     alignment and function description
>sp|Q9LPM9|BCAT6_ARATH Branched-chain-amino-acid aminotransferase 6 OS=Arabidopsis thaliana GN=BCAT6 PE=1 SV=1 Back     alignment and function description
>sp|Q9LE06|BCAT4_ARATH Methionine aminotransferase BCAT4 OS=Arabidopsis thaliana GN=BCAT4 PE=1 SV=1 Back     alignment and function description
>sp|P39576|ILVE2_BACSU Branched-chain-amino-acid aminotransferase 2 OS=Bacillus subtilis (strain 168) GN=ilvK PE=1 SV=5 Back     alignment and function description
>sp|O31461|ILVE1_BACSU Branched-chain-amino-acid transaminase 1 OS=Bacillus subtilis (strain 168) GN=ilvE PE=1 SV=1 Back     alignment and function description
>sp|O86505|ILVE_STRCO Probable branched-chain-amino-acid aminotransferase OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) GN=ilvE PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query367
255537936399 branched-chain amino acid aminotransfera 0.967 0.889 0.734 1e-153
302142143387 unnamed protein product [Vitis vinifera] 0.975 0.925 0.713 1e-148
15218409388 branched-chain-amino-acid aminotransfera 0.920 0.871 0.751 1e-148
225458938387 PREDICTED: branched-chain-amino-acid ami 0.975 0.925 0.702 1e-147
297843816388 ATBCAT-2 [Arabidopsis lyrata subsp. lyra 0.920 0.871 0.739 1e-146
356510642383 PREDICTED: branched-chain-amino-acid ami 0.950 0.911 0.701 1e-143
359492522379 PREDICTED: branched-chain-amino-acid ami 0.855 0.828 0.765 1e-142
358248602388 uncharacterized protein LOC100782644 [Gl 0.964 0.912 0.701 1e-141
288310302389 branched chain amino acid transaminase [ 0.896 0.845 0.727 1e-140
449450320390 PREDICTED: branched-chain-amino-acid ami 0.896 0.843 0.718 1e-140
>gi|255537936|ref|XP_002510033.1| branched-chain amino acid aminotransferase, putative [Ricinus communis] gi|223550734|gb|EEF52220.1| branched-chain amino acid aminotransferase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  546 bits (1408), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 274/373 (73%), Positives = 312/373 (83%), Gaps = 18/373 (4%)

Query: 9   CLRNLIHLFRPASSSLTSKLGACYFC-TSHVASLQQP-GKPS---VF-------SSD--D 54
           CL +L+   R +SSS   +LGA Y C TS  AS QQ   KPS   +F       SSD  D
Sbjct: 7   CLHSLVQSLRISSSS---QLGA-YICYTSQAASSQQRVNKPSANFIFALFLLGGSSDGED 62

Query: 55  EYADLDWDNLGFSIKPADYMYTMKCSKHENFKQGQLSRYANIELSPSAAVLNYGQGVYEG 114
           EYA+LDWDNLGF + P DYMY MKC+K  +F QGQLSRY N+ELSPSA VLNYGQG+YEG
Sbjct: 63  EYANLDWDNLGFGVTPTDYMYLMKCAKDGSFVQGQLSRYGNLELSPSAGVLNYGQGLYEG 122

Query: 115 TKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSPSVDQFVDAVKQIALANKRWVPPPGK 174
           TKAYR EDGR+LLFRPD NA RM++GA+RMCMP PS+DQFVDAVKQ+A +NKRWVPPPGK
Sbjct: 123 TKAYRKEDGRLLLFRPDQNAIRMQMGADRMCMPCPSIDQFVDAVKQVAFSNKRWVPPPGK 182

Query: 175 GTLYIRPLLIGSGPVLGLGPAPEYTFLAYASPVGNYFKEGSAPLNLYIEEEFVRAAPGGA 234
           GTLYIRPLL+GSGPVLGL PAPEYTFL YASPVGNYFKEGSAPLNLYIEEEF RA+ GGA
Sbjct: 183 GTLYIRPLLMGSGPVLGLAPAPEYTFLVYASPVGNYFKEGSAPLNLYIEEEFHRASRGGA 242

Query: 235 GGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATN 294
           GGVK+I+NYAPVLKA+ RAK RGFSDVLYLD+VN+K +EEVSSCNIFVVKGNVIS+P  N
Sbjct: 243 GGVKSITNYAPVLKAIARAKGRGFSDVLYLDAVNKKYLEEVSSCNIFVVKGNVISSPPAN 302

Query: 295 GTILEGITRRSVIEIARDYGYQVEERVIPVDELINADQVFCTGTAVVVAPVGSITYQNKR 354
           GTIL+G+TRRS+IEIA D  YQVEER IPVDEL++AD+VFCTGTAV VAPVGSITYQ++R
Sbjct: 303 GTILQGVTRRSIIEIACDLNYQVEERAIPVDELMDADEVFCTGTAVGVAPVGSITYQDRR 362

Query: 355 VEFKTGSRSVYQE 367
           +E+K  + SV QE
Sbjct: 363 IEYKIRAESVSQE 375

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|302142143|emb|CBI19346.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|15218409|ref|NP_172478.1| branched-chain-amino-acid aminotransferase 2 [Arabidopsis thaliana] gi|79317492|ref|NP_001031015.1| branched-chain-amino-acid aminotransferase 2 [Arabidopsis thaliana] gi|26391680|sp|Q9M439.1|BCAT2_ARATH RecName: Full=Branched-chain-amino-acid aminotransferase 2, chloroplastic; Short=Atbcat-2; Flags: Precursor gi|13877745|gb|AAK43950.1|AF370135_1 putative tat-binding protein [Arabidopsis thaliana] gi|8249004|emb|CAB93128.1| branched-chain amino acid transaminase [Arabidopsis thaliana] gi|15293209|gb|AAK93715.1| putative tat-binding protein [Arabidopsis thaliana] gi|222424474|dbj|BAH20192.1| AT1G10070 [Arabidopsis thaliana] gi|332190416|gb|AEE28537.1| branched-chain-amino-acid aminotransferase 2 [Arabidopsis thaliana] gi|332190417|gb|AEE28538.1| branched-chain-amino-acid aminotransferase 2 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|225458938|ref|XP_002285511.1| PREDICTED: branched-chain-amino-acid aminotransferase 2, chloroplastic [Vitis vinifera] gi|302142142|emb|CBI19345.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|297843816|ref|XP_002889789.1| ATBCAT-2 [Arabidopsis lyrata subsp. lyrata] gi|297335631|gb|EFH66048.1| ATBCAT-2 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|356510642|ref|XP_003524046.1| PREDICTED: branched-chain-amino-acid aminotransferase 2, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|359492522|ref|XP_002285506.2| PREDICTED: branched-chain-amino-acid aminotransferase 2, chloroplastic [Vitis vinifera] Back     alignment and taxonomy information
>gi|358248602|ref|NP_001239909.1| uncharacterized protein LOC100782644 [Glycine max] gi|255646819|gb|ACU23881.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|288310302|gb|ADC45390.1| branched chain amino acid transaminase [Cucumis melo] Back     alignment and taxonomy information
>gi|449450320|ref|XP_004142911.1| PREDICTED: branched-chain-amino-acid aminotransferase 2, chloroplastic-like [Cucumis sativus] gi|449494398|ref|XP_004159536.1| PREDICTED: branched-chain-amino-acid aminotransferase 2, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query367
TAIR|locus:2201921388 BCAT-2 "branched-chain amino a 0.920 0.871 0.751 4.1e-136
TAIR|locus:2201931384 BCAT-1 "branched-chain amino a 0.975 0.932 0.620 8.2e-115
TAIR|locus:2097320413 BCAT3 "branched-chain aminotra 0.836 0.743 0.672 3.5e-114
TAIR|locus:2031040367 BCAT7 "branched-chain amino ac 0.869 0.869 0.596 2.5e-106
TAIR|locus:2031030356 AT1G50110 [Arabidopsis thalian 0.850 0.876 0.591 1.1e-105
TAIR|locus:2091216354 BCAT4 "branched-chain aminotra 0.882 0.915 0.562 2.3e-101
TIGR_CMR|GSU_0656357 GSU_0656 "branched-chain amino 0.809 0.831 0.405 1.5e-58
UNIPROTKB|A0R066368 ilvE "Branched-chain-amino-aci 0.790 0.788 0.398 6.8e-56
UNIPROTKB|Q10399368 ilvE "Branched-chain-amino-aci 0.779 0.777 0.397 6.3e-53
DICTYBASE|DDB_G0285509378 bcaA "branched-chain amino aci 0.790 0.767 0.360 3.3e-47
TAIR|locus:2201921 BCAT-2 "branched-chain amino acid transaminase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1333 (474.3 bits), Expect = 4.1e-136, P = 4.1e-136
 Identities = 254/338 (75%), Positives = 288/338 (85%)

Query:    30 ACYFCTSHVASLQQPGKPSVFSSDDEYADLDWDNLGFSIKPADYMYTMKCSKHENFKQGQ 89
             A Y   +  A  ++  KP   + DD YADLDWDNLGF + PADYMY MKCSK   F QG+
Sbjct:    27 AKYNAQAASALREERKKPLYQNGDDVYADLDWDNLGFGLNPADYMYVMKCSKDGEFTQGE 86

Query:    90 LSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSP 149
             LS Y NI+LSPSA VLNYGQ +YEGTKAYR E+G++LLFRPD NA RMK+GAERM MPSP
Sbjct:    87 LSPYGNIQLSPSAGVLNYGQAIYEGTKAYRKENGKLLLFRPDHNAIRMKLGAERMLMPSP 146

Query:   150 SVDQFVDAVKQIALANKRWVPPPGKGTLYIRPLLIGSGPVLGLGPAPEYTFLAYASPVGN 209
             SVDQFV+AVKQ ALANKRWVPP GKGTLYIRPLL+GSGP+LGLGPAPEYTF+ YASPVGN
Sbjct:   147 SVDQFVNAVKQTALANKRWVPPAGKGTLYIRPLLMGSGPILGLGPAPEYTFIVYASPVGN 206

Query:   210 YFKEGSAPLNLYIEEEFVRAAPGGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNR 269
             YFKEG A LNLY+EEE+VRAAPGGAGGVK+I+NYAPVLKAL RAKSRGFSDVLYLDSV +
Sbjct:   207 YFKEGMAALNLYVEEEYVRAAPGGAGGVKSITNYAPVLKALSRAKSRGFSDVLYLDSVKK 266

Query:   270 KNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPVDELIN 329
             K +EE SSCN+FVVKG  ISTPATNGTILEGITR+SV+EIA D GYQV E+ + VDE+++
Sbjct:   267 KYLEEASSCNVFVVKGRTISTPATNGTILEGITRKSVMEIASDQGYQVVEKAVHVDEVMD 326

Query:   330 ADQVFCTGTAVVVAPVGSITYQNKRVEFKTGSRSVYQE 367
             AD+VFCTGTAVVVAPVG+ITYQ KRVE+KTG  SV Q+
Sbjct:   327 ADEVFCTGTAVVVAPVGTITYQEKRVEYKTGDESVCQK 364
GO:0003824 "catalytic activity" evidence=IEA;ISS
GO:0004084 "branched-chain-amino-acid transaminase activity" evidence=IEA;IGI
GO:0005737 "cytoplasm" evidence=ISM
GO:0005739 "mitochondrion" evidence=ISM
GO:0008152 "metabolic process" evidence=IEA
GO:0009081 "branched-chain amino acid metabolic process" evidence=IEA
GO:0009507 "chloroplast" evidence=IDA
GO:0009407 "toxin catabolic process" evidence=RCA
GO:0009744 "response to sucrose stimulus" evidence=RCA
GO:0009750 "response to fructose stimulus" evidence=RCA
TAIR|locus:2201931 BCAT-1 "branched-chain amino acid transaminase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2097320 BCAT3 "branched-chain aminotransferase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031040 BCAT7 "branched-chain amino acid transaminase 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031030 AT1G50110 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2091216 BCAT4 "branched-chain aminotransferase4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_0656 GSU_0656 "branched-chain amino acid aminotransferase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
UNIPROTKB|A0R066 ilvE "Branched-chain-amino-acid aminotransferase" [Mycobacterium smegmatis str. MC2 155 (taxid:246196)] Back     alignment and assigned GO terms
UNIPROTKB|Q10399 ilvE "Branched-chain-amino-acid aminotransferase" [Mycobacterium tuberculosis (taxid:1773)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0285509 bcaA "branched-chain amino acid aminotransferase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9ZJF1ILVE_HELPJ2, ., 6, ., 1, ., 4, 20.39010.81470.8794yesno
Q9M439BCAT2_ARATH2, ., 6, ., 1, ., 4, 20.75140.92090.8711yesno
O26004ILVE_HELPY2, ., 6, ., 1, ., 4, 20.39340.81470.8794yesno
O86505ILVE_STRCO2, ., 6, ., 1, ., 4, 20.40830.82280.8342yesno
Q5HRJ8ILVE_STAEQ2, ., 6, ., 1, ., 4, 20.39600.80380.8240yesno
Q6GJB4ILVE_STAAR2, ., 6, ., 1, ., 4, 20.39600.80380.8240yesno
Q8CQ78ILVE_STAES2, ., 6, ., 1, ., 4, 20.39930.80380.8240yesno
O32954ILVE_MYCLE2, ., 6, ., 1, ., 4, 20.38310.80920.8070yesno
P39576ILVE2_BACSU2, ., 6, ., 1, ., 4, 20.40710.82010.8292yesno
A0R066ILVE_MYCS22, ., 6, ., 1, ., 4, 20.38830.81190.8097yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.6.10.976
4th Layer2.6.1.420.991

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
ATBCAT-2
ATBCAT-2 (ARABIDOPSIS THALIANA BRANCHED-CHAIN AMINO ACID TRANSAMINASE 2); branched-chain-amino-acid transaminase/ catalytic; Encodes a chloroplast branched-chain amino acid aminotransferase. Complements the yeast leu/iso-leu/val auxotrophy mutant. ; Converts 2-oxo acids to branched-chain amino acids. Acts on leucine, isoleucine and valine (By similarity) (388 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
AT1G21400
2-oxoisovalerate dehydrogenase, putative / 3-methyl-2-oxobutanoate dehydrogenase, putative / br [...] (472 aa)
   • •• 0.985
BCDH_BETA1
BCDH BETA1 (BRANCHED-CHAIN ALPHA-KETO ACID DECARBOXYLASE E1 BETA SUBUNIT); 3-methyl-2-oxobutano [...] (352 aa)
   • •• 0.980
AT3G23940
dehydratase family; dehydratase family; FUNCTIONS IN- catalytic activity, dihydroxy-acid dehydr [...] (608 aa)
•  •••• 0.979
DIN4
DIN4 (DARK INDUCIBLE 4); 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) [...] (358 aa)
   • •• 0.967
MAM1
MAM1 (METHYLTHIOALKYLMALATE SYNTHASE 1); 2-isopropylmalate synthase/ methylthioalkylmalate synt [...] (506 aa)
•    •• 0.960
IMS2
IMS2 (2-ISOPROPYLMALATE SYNTHASE 2); 2-isopropylmalate synthase/ methylthioalkylmalate synthase [...] (503 aa)
•    •• 0.943
MAML-4
MAML-4 (METHYLTHIOALKYLMALATE SYNTHASE-LIKE 4); 2-isopropylmalate synthase; Encodes an active A [...] (631 aa)
•    •• 0.936
IMS1
IMS1 (2-ISOPROPYLMALATE SYNTHASE 1); 2-isopropylmalate synthase; Encodes an active Arabidopsis [...] (631 aa)
•    •• 0.934
EMB2247
EMB2247 (embryo defective 2247); ATP binding / aminoacyl-tRNA ligase/ nucleotide binding / vali [...] (970 aa)
     •• 0.917
EMB2369
EMB2369 (EMBRYO DEFECTIVE 2369); ATP binding / aminoacyl-tRNA ligase/ leucine-tRNA ligase/ nucl [...] (973 aa)
     •• 0.917

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query367
PLN02782403 PLN02782, PLN02782, Branched-chain amino acid amin 0.0
PLN02259388 PLN02259, PLN02259, branched-chain-amino-acid amin 0.0
PLN03117355 PLN03117, PLN03117, Branched-chain-amino-acid amin 1e-168
PLN02883384 PLN02883, PLN02883, Branched-chain amino acid amin 1e-159
PRK13357356 PRK13357, PRK13357, branched-chain amino acid amin 1e-140
cd01557279 cd01557, BCAT_beta_family, BCAT_beta_family: Branc 1e-123
TIGR01123313 TIGR01123, ilvE_II, branched-chain amino acid amin 1e-105
cd00449256 cd00449, PLPDE_IV, PyridoxaL 5'-Phosphate Dependen 4e-86
COG0115284 COG0115, IlvE, Branched-chain amino acid aminotran 5e-75
PRK06606306 PRK06606, PRK06606, branched-chain amino acid amin 1e-43
TIGR01122298 TIGR01122, ilvE_I, branched-chain amino acid amino 2e-39
pfam01063231 pfam01063, Aminotran_4, Aminotransferase class IV 2e-34
cd01558270 cd01558, D-AAT_like, D-Alanine aminotransferase (D 4e-33
PRK07544292 PRK07544, PRK07544, branched-chain amino acid amin 8e-29
PRK13356286 PRK13356, PRK13356, aminotransferase; Provisional 3e-28
PRK08320288 PRK08320, PRK08320, branched-chain amino acid amin 5e-26
cd01559249 cd01559, ADCL_like, ADCL_like: 4-Amino-4-deoxychor 4e-24
PRK07849292 PRK07849, PRK07849, 4-amino-4-deoxychorismate lyas 2e-18
TIGR03461261 TIGR03461, pabC_Proteo, aminodeoxychorismate lyase 3e-16
TIGR01121276 TIGR01121, D_amino_aminoT, D-amino acid aminotrans 1e-13
PRK07650283 PRK07650, PRK07650, 4-amino-4-deoxychorismate lyas 1e-13
PRK06092268 PRK06092, PRK06092, 4-amino-4-deoxychorismate lyas 4e-13
PRK06680286 PRK06680, PRK06680, D-amino acid aminotransferase; 2e-11
PRK12479299 PRK12479, PRK12479, branched-chain amino acid amin 3e-11
PRK12400290 PRK12400, PRK12400, D-amino acid aminotransferase; 4e-08
PLN02845336 PLN02845, PLN02845, Branched-chain-amino-acid amin 0.003
>gnl|CDD|215418 PLN02782, PLN02782, Branched-chain amino acid aminotransferase Back     alignment and domain information 
 Score =  530 bits (1368), Expect = 0.0
 Identities = 216/303 (71%), Positives = 254/303 (83%)

Query: 55  EYADLDWDNLGFSIKPADYMYTMKCSKHENFKQGQLSRYANIELSPSAAVLNYGQGVYEG 114
           E AD+DWDNLGF + P DYMY MKC++   F +G+L R+ NIELSPSA VLNYGQG++EG
Sbjct: 66  ELADIDWDNLGFGLVPTDYMYIMKCNRDGEFSKGELQRFGNIELSPSAGVLNYGQGLFEG 125

Query: 115 TKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSPSVDQFVDAVKQIALANKRWVPPPGK 174
            KAYR EDG ILLFRP+ NA RM+ GAERMCMP+P+V+QFV+AVK+  LANKRWVPPPGK
Sbjct: 126 LKAYRKEDGNILLFRPEENAIRMRNGAERMCMPAPTVEQFVEAVKETVLANKRWVPPPGK 185

Query: 175 GTLYIRPLLIGSGPVLGLGPAPEYTFLAYASPVGNYFKEGSAPLNLYIEEEFVRAAPGGA 234
           G+LYIRPLL+GSG VLGL PAPEYTFL Y SPVGNYFKEG AP+NL +E EF RA PGG 
Sbjct: 186 GSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKEGVAPINLIVENEFHRATPGGT 245

Query: 235 GGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATN 294
           GGVK I NYA VLKA   AK++G+SDVLYLD V++K +EEVSSCNIF+VK NVISTPA  
Sbjct: 246 GGVKTIGNYAAVLKAQSIAKAKGYSDVLYLDCVHKKYLEEVSSCNIFIVKDNVISTPAIK 305

Query: 295 GTILEGITRRSVIEIARDYGYQVEERVIPVDELINADQVFCTGTAVVVAPVGSITYQNKR 354
           GTIL GITR+S+I++AR  G+QVEER + VDEL+ AD+VFCTGTAVVV+PVGSITY+ KR
Sbjct: 306 GTILPGITRKSIIDVARSQGFQVEERNVTVDELLEADEVFCTGTAVVVSPVGSITYKGKR 365

Query: 355 VEF 357
           V +
Sbjct: 366 VSY 368

Length = 403
>gnl|CDD|177901 PLN02259, PLN02259, branched-chain-amino-acid aminotransferase 2 Back     alignment and domain information
>gnl|CDD|178664 PLN03117, PLN03117, Branched-chain-amino-acid aminotransferase; Provisional Back     alignment and domain information
>gnl|CDD|178471 PLN02883, PLN02883, Branched-chain amino acid aminotransferase Back     alignment and domain information
>gnl|CDD|237363 PRK13357, PRK13357, branched-chain amino acid aminotransferase; Provisional Back     alignment and domain information
>gnl|CDD|238798 cd01557, BCAT_beta_family, BCAT_beta_family: Branched-chain aminotransferase catalyses the transamination of the branched-chain amino acids leusine, isoleucine and valine to their respective alpha-keto acids, alpha-ketoisocaproate, alpha-keto-beta-methylvalerate and alpha-ketoisovalerate Back     alignment and domain information
>gnl|CDD|233278 TIGR01123, ilvE_II, branched-chain amino acid aminotransferase, group II Back     alignment and domain information
>gnl|CDD|238254 cd00449, PLPDE_IV, PyridoxaL 5'-Phosphate Dependent Enzymes class IV (PLPDE_IV) Back     alignment and domain information
>gnl|CDD|223193 COG0115, IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|235841 PRK06606, PRK06606, branched-chain amino acid aminotransferase; Validated Back     alignment and domain information
>gnl|CDD|130192 TIGR01122, ilvE_I, branched-chain amino acid aminotransferase, group I Back     alignment and domain information
>gnl|CDD|216275 pfam01063, Aminotran_4, Aminotransferase class IV Back     alignment and domain information
>gnl|CDD|238799 cd01558, D-AAT_like, D-Alanine aminotransferase (D-AAT_like): D-amino acid aminotransferase catalyzes transamination between D-amino acids and their respective alpha-keto acids Back     alignment and domain information
>gnl|CDD|181025 PRK07544, PRK07544, branched-chain amino acid aminotransferase; Validated Back     alignment and domain information
>gnl|CDD|237362 PRK13356, PRK13356, aminotransferase; Provisional Back     alignment and domain information
>gnl|CDD|236238 PRK08320, PRK08320, branched-chain amino acid aminotransferase; Reviewed Back     alignment and domain information
>gnl|CDD|238800 cd01559, ADCL_like, ADCL_like: 4-Amino-4-deoxychorismate lyase: is a member of the fold-type IV of PLP dependent enzymes that converts 4-amino-4-deoxychorismate (ADC) to p-aminobenzoate and pyruvate Back     alignment and domain information
>gnl|CDD|236114 PRK07849, PRK07849, 4-amino-4-deoxychorismate lyase; Provisional Back     alignment and domain information
>gnl|CDD|132501 TIGR03461, pabC_Proteo, aminodeoxychorismate lyase Back     alignment and domain information
>gnl|CDD|130191 TIGR01121, D_amino_aminoT, D-amino acid aminotransferase Back     alignment and domain information
>gnl|CDD|181067 PRK07650, PRK07650, 4-amino-4-deoxychorismate lyase; Provisional Back     alignment and domain information
>gnl|CDD|235696 PRK06092, PRK06092, 4-amino-4-deoxychorismate lyase; Reviewed Back     alignment and domain information
>gnl|CDD|180656 PRK06680, PRK06680, D-amino acid aminotransferase; Reviewed Back     alignment and domain information
>gnl|CDD|183549 PRK12479, PRK12479, branched-chain amino acid aminotransferase; Provisional Back     alignment and domain information
>gnl|CDD|171470 PRK12400, PRK12400, D-amino acid aminotransferase; Reviewed Back     alignment and domain information
>gnl|CDD|215454 PLN02845, PLN02845, Branched-chain-amino-acid aminotransferase-like protein Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 367
PLN02883384 Branched-chain amino acid aminotransferase 100.0
PLN02259388 branched-chain-amino-acid aminotransferase 2 100.0
KOG0975379 consensus Branched chain aminotransferase BCAT1, p 100.0
PLN02782403 Branched-chain amino acid aminotransferase 100.0
PLN03117355 Branched-chain-amino-acid aminotransferase; Provis 100.0
PRK13357356 branched-chain amino acid aminotransferase; Provis 100.0
TIGR01123313 ilvE_II branched-chain amino acid aminotransferase 100.0
TIGR01122298 ilvE_I branched-chain amino acid aminotransferase, 100.0
PRK06606306 branched-chain amino acid aminotransferase; Valida 100.0
COG0115284 IlvE Branched-chain amino acid aminotransferase/4- 100.0
cd01557279 BCAT_beta_family BCAT_beta_family: Branched-chain 100.0
PRK12479299 branched-chain amino acid aminotransferase; Provis 100.0
PRK07544292 branched-chain amino acid aminotransferase; Valida 100.0
PRK08320288 branched-chain amino acid aminotransferase; Review 100.0
PRK13356286 aminotransferase; Provisional 100.0
cd01558270 D-AAT_like D-Alanine aminotransferase (D-AAT_like) 100.0
PRK07650283 4-amino-4-deoxychorismate lyase; Provisional 100.0
PRK06680286 D-amino acid aminotransferase; Reviewed 100.0
TIGR01121276 D_amino_aminoT D-amino acid aminotransferase. Spec 100.0
PLN02845336 Branched-chain-amino-acid aminotransferase-like pr 100.0
PRK12400290 D-amino acid aminotransferase; Reviewed 100.0
PRK07849292 4-amino-4-deoxychorismate lyase; Provisional 100.0
TIGR03461261 pabC_Proteo aminodeoxychorismate lyase. Members of 100.0
PRK06092268 4-amino-4-deoxychorismate lyase; Reviewed 100.0
cd00449256 PLPDE_IV PyridoxaL 5'-Phosphate Dependent Enzymes 100.0
cd01559249 ADCL_like ADCL_like: 4-Amino-4-deoxychorismate lya 100.0
PRK09266266 hypothetical protein; Provisional 100.0
PF01063231 Aminotran_4: Aminotransferase class IV; InterPro: 100.0
PRK07546209 hypothetical protein; Provisional 100.0
PRK07101187 hypothetical protein; Provisional 99.96
>PLN02883 Branched-chain amino acid aminotransferase Back     alignment and domain information 
Probab=100.00  E-value=6.8e-86  Score=655.89  Aligned_cols=359  Identities=62%  Similarity=0.990  Sum_probs=330.2

Q ss_pred             HHhhhccceeccCccccccccceeeecccccccccCC-CCCCcccCCCccCCCCCCCCCCccccCCceEEEEEcCCceee
Q 036241            8 ACLRNLIHLFRPASSSLTSKLGACYFCTSHVASLQQP-GKPSVFSSDDEYADLDWDNLGFSIKPADYMYTMKCSKHENFK   86 (367)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~f~~~~td~~~~~~~~~~~~w~   86 (367)
                      ++||+||++.+++| |+.|+++++.+++++..+.... ....-...++..+++||++|+||.+|||||++++|+.+++|.
T Consensus         1 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~fg~~~td~m~~~~~~~~~~w~   79 (384)
T PLN02883          1 MALRRCLPQSSTTS-SYLSKIWGFRMHGTKAAASVVEEHVSGAEREDEEYADVDWDKLGFSLVRTDFMFATKSCRDGNFE   79 (384)
T ss_pred             Cchhhhccccccch-hhhhccccceeccccccccchhhhcccccccccccccCCchhcCcCCeecCceEEEEEcCCCccc
Confidence            47999999998887 9999999999999988554322 111111456677899999999999999999999999888999


Q ss_pred             CCeeeeCCCcccCccCccccccCeEEEEEEEEeecCCeEEEeChHhHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHcC
Q 036241           87 QGQLSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSPSVDQFVDAVKQIALANK  166 (367)
Q Consensus        87 ng~i~p~~~~~i~~~~~~l~yG~~vFEt~ka~~~~dG~i~lFr~d~Hl~RL~~Sa~~l~~p~~~~e~l~~~i~~lv~~~~  166 (367)
                      +|+|+|+++++|+|++++|||||+||||||+|++.||++++||+++|++||++||++|+||.++.++|+++|+++++.|.
T Consensus        80 ~~~i~p~~~l~l~p~a~~l~YGdgvFEg~kayr~~dG~i~lfr~~~h~~RL~~SA~rL~lp~~~~e~~~~~i~~lv~~n~  159 (384)
T PLN02883         80 QGYLSRYGNIELNPAAGILNYGQGLIEGMKAYRGEDGRILLFRPELNAMRMKIGAERMCMHSPSVHQFIEGVKQTVLANR  159 (384)
T ss_pred             CCeEeeCCCcccCccccHhhcceeeeeeEEEEECCCCCEeeeChhHHHHHHHHHHHHhCCCCcCHHHHHHHHHHHHHhcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCceEEEEEEEEecCCcccccCCCceEEEEEEeccCCcccCCCccEEEEeecceeecCCCCCCCcccccCchHH
Q 036241          167 RWVPPPGKGTLYIRPLLIGSGPVLGLGPAPEYTFLAYASPVGNYFKEGSAPLNLYIEEEFVRAAPGGAGGVKAISNYAPV  246 (367)
Q Consensus       167 ~~vP~~~~~~lyIRp~~~g~~~~lg~~~~~~~~~~I~~~P~~~~~~~g~~~v~l~v~~~~~R~~p~g~g~~Kt~~nY~~~  246 (367)
                      .|||+.+.+++||||+++++++.+|+.++.+++++|+++|+++|+++|++++++.+++.++|++|++++++|++|||+++
T Consensus       160 ~wvp~~~~~~lYIRp~v~~~~~~lG~~~~~~~~~~i~~~p~~~y~~~g~~~v~l~~~~~~~Ra~~~g~g~~K~~~nYa~~  239 (384)
T PLN02883        160 RWVPPPGKGSLYLRPLLFGSGASLGVAAAPEYTFLVFGSPVQNYFKEGTAALNLYVEEVIPRAYLGGTGGVKAISNYGPV  239 (384)
T ss_pred             ccCCCCCCceEEEEEEEEecCCccCCCCCCCeEEEEEEEecccccccCcceEEEEECccccccCCCCCcccchhhhHHHH
Confidence            99999877899999999999888899988889999999999999988888999999888899999999999999999999


Q ss_pred             HHHHHHHHhCCCceEEEEeccCCCeEEecCceeEEEEECCEEEccCCCCCCccchHHHHHHHHHHHCCCcEEEEEeCHHH
Q 036241          247 LKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPVDE  326 (367)
Q Consensus       247 ~~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TP~l~~~ILpGITR~sil~la~~~G~~V~Er~i~~~e  326 (367)
                      ++++++|+++||||+||||..++|+|+|+++||||++++++|+||+++++|||||||++||++|+++|++|+||+|+++|
T Consensus       240 lla~~eA~~~G~de~L~Ld~~~~~~V~E~~~sNlF~v~~~~l~TP~l~~~iLpGITR~svl~la~~~G~~V~Er~i~~~e  319 (384)
T PLN02883        240 LEVMRRAKSRGFSDVLYLDADTGKNIEEVSAANIFLVKGNIIVTPATSGTILGGITRKSIIEIALDLGYKVEERRVPVEE  319 (384)
T ss_pred             HHHHHHHHHCCCCEEEEEeCCCCCEEEEcCcEEEEEEECCEEEeCCCcCCcCcCHHHHHHHHHHHHCCCeEEEEECCHHH
Confidence            99999999999999999997556899999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhcceeEEEccccceEEeEEEEECCEEEEeCCCccccccC
Q 036241          327 LINADQVFCTGTAVVVAPVGSITYQNKRVEFKTGSRSVYQE  367 (367)
Q Consensus       327 L~~adEvf~~gTa~~I~PV~~I~~~g~~~~~~~~~G~vt~~  367 (367)
                      |.+|||+|+|||+++|+||++|+++++.+.+..+.||+|++
T Consensus       320 L~~AdEvF~tgTa~~I~PV~~I~~~~~~~~~~~~~G~vt~~  360 (384)
T PLN02883        320 LKEAEEVFCTGTAAGVASVGSITFKNTRTEYKVGDGIVTQQ  360 (384)
T ss_pred             HHhCCEeeeccChhheEEEEEEeccCceeecccCCCHHHHH
Confidence            99999999999999999999999888876444445888763

>PLN02259 branched-chain-amino-acid aminotransferase 2 Back     alignment and domain information
>KOG0975 consensus Branched chain aminotransferase BCAT1, pyridoxal phosphate enzymes type IV superfamily [Amino acid transport and metabolism] Back     alignment and domain information
>PLN02782 Branched-chain amino acid aminotransferase Back     alignment and domain information
>PLN03117 Branched-chain-amino-acid aminotransferase; Provisional Back     alignment and domain information
>PRK13357 branched-chain amino acid aminotransferase; Provisional Back     alignment and domain information
>TIGR01123 ilvE_II branched-chain amino acid aminotransferase, group II Back     alignment and domain information
>TIGR01122 ilvE_I branched-chain amino acid aminotransferase, group I Back     alignment and domain information
>PRK06606 branched-chain amino acid aminotransferase; Validated Back     alignment and domain information
>COG0115 IlvE Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>cd01557 BCAT_beta_family BCAT_beta_family: Branched-chain aminotransferase catalyses the transamination of the branched-chain amino acids leusine, isoleucine and valine to their respective alpha-keto acids, alpha-ketoisocaproate, alpha-keto-beta-methylvalerate and alpha-ketoisovalerate Back     alignment and domain information
>PRK12479 branched-chain amino acid aminotransferase; Provisional Back     alignment and domain information
>PRK07544 branched-chain amino acid aminotransferase; Validated Back     alignment and domain information
>PRK08320 branched-chain amino acid aminotransferase; Reviewed Back     alignment and domain information
>PRK13356 aminotransferase; Provisional Back     alignment and domain information
>cd01558 D-AAT_like D-Alanine aminotransferase (D-AAT_like): D-amino acid aminotransferase catalyzes transamination between D-amino acids and their respective alpha-keto acids Back     alignment and domain information
>PRK07650 4-amino-4-deoxychorismate lyase; Provisional Back     alignment and domain information
>PRK06680 D-amino acid aminotransferase; Reviewed Back     alignment and domain information
>TIGR01121 D_amino_aminoT D-amino acid aminotransferase Back     alignment and domain information
>PLN02845 Branched-chain-amino-acid aminotransferase-like protein Back     alignment and domain information
>PRK12400 D-amino acid aminotransferase; Reviewed Back     alignment and domain information
>PRK07849 4-amino-4-deoxychorismate lyase; Provisional Back     alignment and domain information
>TIGR03461 pabC_Proteo aminodeoxychorismate lyase Back     alignment and domain information
>PRK06092 4-amino-4-deoxychorismate lyase; Reviewed Back     alignment and domain information
>cd00449 PLPDE_IV PyridoxaL 5'-Phosphate Dependent Enzymes class IV (PLPDE_IV) Back     alignment and domain information
>cd01559 ADCL_like ADCL_like: 4-Amino-4-deoxychorismate lyase: is a member of the fold-type IV of PLP dependent enzymes that converts 4-amino-4-deoxychorismate (ADC) to p-aminobenzoate and pyruvate Back     alignment and domain information
>PRK09266 hypothetical protein; Provisional Back     alignment and domain information
>PF01063 Aminotran_4: Aminotransferase class IV; InterPro: IPR001544 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue Back     alignment and domain information
>PRK07546 hypothetical protein; Provisional Back     alignment and domain information
>PRK07101 hypothetical protein; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query367
4dqn_A345 Crystal Structure Of The Branched-Chain Aminotransf 3e-63
3dtf_A372 Structural Analysis Of Mycobacterial Branched Chain 6e-59
3jz6_A373 Crystal Structure Of Mycobacterium Smegmatis Branch 6e-59
3ht5_A368 Crystal Structure Of Ilve A Branched Chain Amino Ac 3e-57
3uyy_A358 Crystal Structures Of Branched-Chain Aminotransfera 5e-56
2cog_A386 Crystal Structure Of Oxidized Human Cytosolic Branc 2e-44
2abj_A366 Crystal Structure Of Human Branched Chain Amino Aci 7e-44
2hdk_A365 Crystal Structure Of Cys315ala-Cys318ala Mutant Of 2e-43
2hgw_A365 Crystal Structure Of Cys318ala Mutant Of Human Mito 2e-43
2hg8_A365 Crystal Structure Of Cys315ala Mutant Of Human Mito 5e-43
1ekf_A365 Crystallographic Structure Of Human Branched Chain 5e-43
2hhf_B365 X-ray Crystal Structure Of Oxidized Human Mitochond 9e-42
2hhf_A365 X-ray Crystal Structure Of Oxidized Human Mitochond 7e-41
1a3g_A308 Branched-chain Amino Acid Aminotransferase From Esc 8e-22
1i1k_A309 Crystal Structure Of Eschelichia Coli Branched-chai 8e-22
3u0g_A328 Crystal Structure Of Branched-Chain Amino Acid Amin 1e-18
1wrv_A308 Crystal Structure Of T.Th.Hb8 Branched-Chain Amino 3e-18
3csw_A285 Crystal Structure Of A Putative Branched-Chain Amin 7e-10
1daa_A282 Crystallographic Structure Of D-Amino Acid Aminotra 2e-09
3lqs_A280 Complex Structure Of D-Amino Acid Aminotransferase 2e-09
3daa_A277 Crystallographic Structure Of D-Amino Acid Aminotra 3e-09
5daa_A277 E177k Mutant Of D-Amino Acid Aminotransferase Compl 9e-09
1g2w_A282 E177s Mutant Of The Pyridoxal-5'-phosphate Enzyme D 1e-08
1a0g_A282 L201a Mutant Of D-Amino Acid Aminotransferase Compl 1e-08
3sno_A315 Crystal Structure Of A Hypothetical Aminotransferas 2e-07
3lul_A272 Crystal Structure Of Putative 4-Amino-4-Deoxychoris 2e-06
1et0_A269 Crystal Structure Of Aminodeoxychorismate Lyase Fro 3e-04
>pdb|4DQN|A Chain A, Crystal Structure Of The Branched-Chain Aminotransferase From Streptococcus Mutans Length = 345 Back     alignment and structure 
Iteration: 1

 Score =  238 bits (608), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 129/298 (43%), Positives = 180/298 (60%), Gaps = 5/298 (1%)
Query: 58  DLDWDNLGFSIKPADYMYTMKCSKHENFKQGQLSRYANIELSPSAAVLNYGQGVYEGTKA 117
           DLDW NLGF      + Y +   K   +  G+L+  A + +S S+  L+YGQ  +EG KA
Sbjct: 8   DLDWKNLGFEYHKLPFRY-ISYYKDGKWDDGKLTEDATLHISESSPALHYGQEAFEGLKA 66
Query: 118 YRTEDGRILLFRPDLNASRMKIGAERMCMPSPSVDQFVDAVKQIALANKRWVPPPGKG-T 176
           YRT+DG + LFRP++NA R++  A+R+ MP    D+F+DA KQ+  AN+ +VPP G G T
Sbjct: 67  YRTKDGSVQLFRPNMNAERLQRTADRLLMPQVPTDKFIDAAKQVVRANEEYVPPYGTGAT 126
Query: 177 LYIRPLLIGSGPVLGLGPAPEYTFLAYASPVGNYFKEGSAPLNLYIEEEFVRAAPGGAGG 236
           LY+RPLLIG G V+G+ PA EY F  +A PVGNYFK G AP N  I++++ RAAP G G 
Sbjct: 127 LYLRPLLIGVGDVIGVHPADEYIFTIFAMPVGNYFKGGLAPTNFLIQDDYDRAAPHGTGA 186
Query: 237 VKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIF-VVKGNVISTPATNG 295
            K   NYA  L     A  R FSDV+YLD      +EEV S N F + K N   TP +  
Sbjct: 187 AKVGGNYAASLLPGKVAHERQFSDVIYLDPATHTKIEEVGSANFFGITKDNEFITPLSP- 245
Query: 296 TILEGITRRSVIEIARD-YGYQVEERVIPVDELINADQVFCTGTAVVVAPVGSITYQN 352
           +IL  +T+ S++ +A   +G +  E  + VDEL    +    GTA V++P+G + + +
Sbjct: 246 SILPSVTKYSLLYLAEHRFGMKAIEGDVCVDELDKFVEAGACGTAAVISPIGGVQHGD 303
>pdb|3DTF|A Chain A, Structural Analysis Of Mycobacterial Branched Chain Aminotransferase- Implications For Inhibitor Design Length = 372 Back     alignment and structure
>pdb|3JZ6|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Branched Chain Aminotransferase In Complex With Pyridoxal-5'-Phosphate At 1.9 Angstrom. Length = 373 Back     alignment and structure
>pdb|3HT5|A Chain A, Crystal Structure Of Ilve A Branched Chain Amino Acid Transaminase From Mycobacterium Tuberculosis Length = 368 Back     alignment and structure
>pdb|3UYY|A Chain A, Crystal Structures Of Branched-Chain Aminotransferase From Deinococcus Radiodurans Complexes With Alpha-Ketoisocaproate And L-Glutamate Suggest Its Radio-Resistance For Catalysis Length = 358 Back     alignment and structure
>pdb|2COG|A Chain A, Crystal Structure Of Oxidized Human Cytosolic Branched-Chain Aminotransferase Complexed With 4-Methylvalerate Length = 386 Back     alignment and structure
>pdb|2ABJ|A Chain A, Crystal Structure Of Human Branched Chain Amino Acid Transaminase In A Complex With An Inhibitor, C16h10n2o4f3scl, And Pyridoxal 5' Phosphate. Length = 366 Back     alignment and structure
>pdb|2HDK|A Chain A, Crystal Structure Of Cys315ala-Cys318ala Mutant Of Human Mitochondrial Branched Chain Aminotransferase Length = 365 Back     alignment and structure
>pdb|2HGW|A Chain A, Crystal Structure Of Cys318ala Mutant Of Human Mitochondrial Branched Chain Aminotransferase Length = 365 Back     alignment and structure
>pdb|2HG8|A Chain A, Crystal Structure Of Cys315ala Mutant Of Human Mitochondrial Branched Chain Aminotransferase Complexed With Its Substrate Mimic, N-Methyl Leucine. Length = 365 Back     alignment and structure
>pdb|1EKF|A Chain A, Crystallographic Structure Of Human Branched Chain Amino Acid Aminotransferase (Mitochondrial) Complexed With Pyridoxal-5'- Phosphate At 1.95 Angstroms (Orthorhombic Form) Length = 365 Back     alignment and structure
>pdb|2HHF|B Chain B, X-ray Crystal Structure Of Oxidized Human Mitochondrial Branched Chain Aminotransferase (hbcatm) Length = 365 Back     alignment and structure
>pdb|2HHF|A Chain A, X-ray Crystal Structure Of Oxidized Human Mitochondrial Branched Chain Aminotransferase (hbcatm) Length = 365 Back     alignment and structure
>pdb|1A3G|A Chain A, Branched-chain Amino Acid Aminotransferase From Escherichia Coli Length = 308 Back     alignment and structure
>pdb|1I1K|A Chain A, Crystal Structure Of Eschelichia Coli Branched-chain Amino Acid Aminotransferase. Length = 309 Back     alignment and structure
>pdb|3U0G|A Chain A, Crystal Structure Of Branched-Chain Amino Acid Aminotransferase From Burkholderia Pseudomallei Length = 328 Back     alignment and structure
>pdb|1WRV|A Chain A, Crystal Structure Of T.Th.Hb8 Branched-Chain Amino Acid Aminotransferase Length = 308 Back     alignment and structure
>pdb|3CSW|A Chain A, Crystal Structure Of A Putative Branched-Chain Amino Acid Aminotransferase (Tm0831) From Thermotoga Maritima At 2.15 A Resolution Length = 285 Back     alignment and structure
>pdb|1DAA|A Chain A, Crystallographic Structure Of D-Amino Acid Aminotransferase Complexed With Pyridoxal-5'-Phosphate Length = 282 Back     alignment and structure
>pdb|3LQS|A Chain A, Complex Structure Of D-Amino Acid Aminotransferase And 4-Amino-4,5- Dihydro-Thiophenecarboxylic Acid (Adta) Length = 280 Back     alignment and structure
>pdb|3DAA|A Chain A, Crystallographic Structure Of D-Amino Acid Aminotransferase Inactivated By Pyridoxyl-D-Alanine Length = 277 Back     alignment and structure
>pdb|5DAA|A Chain A, E177k Mutant Of D-Amino Acid Aminotransferase Complexed With Pyridoxamine-5'-Phosphate Length = 277 Back     alignment and structure
>pdb|1G2W|A Chain A, E177s Mutant Of The Pyridoxal-5'-phosphate Enzyme D-amino Acid Aminotransferase Length = 282 Back     alignment and structure
>pdb|1A0G|A Chain A, L201a Mutant Of D-Amino Acid Aminotransferase Complexed With Pyridoxamine-5'-Phosphate Length = 282 Back     alignment and structure
>pdb|3SNO|A Chain A, Crystal Structure Of A Hypothetical Aminotransferase (Ncgl2491) From Corynebacterium Glutamicum Atcc 13032 Kitasato At 1.60 A Resolution Length = 315 Back     alignment and structure
>pdb|3LUL|A Chain A, Crystal Structure Of Putative 4-Amino-4-Deoxychorismate Lyase. (Yp_094631.1) From Legionella Pneumophila Subsp. Pneumophila Str. Philadelphia 1 At 1.78 A Resolution Length = 272 Back     alignment and structure
>pdb|1ET0|A Chain A, Crystal Structure Of Aminodeoxychorismate Lyase From Escherichia Coli Length = 269 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query367
3dth_A372 Branched-chain amino acid aminotransferase; open t 1e-157
2a1h_A365 Branched chain aminotransferase; fold type IV; HET 1e-151
2coi_A386 Branched chain aminotransferase 1, cytosolic; PLP- 1e-149
1iye_A309 Branched-chain amino acid aminotransferase; hexame 1e-50
3sno_A315 Hypothetical aminotransferase; D-aminoacid aminotr 1e-50
3u0g_A328 Putative branched-chain amino acid aminotransfera; 5e-50
2eiy_A308 ILVE, branched-chain amino acid aminotransferase; 9e-50
3lul_A272 4-amino-4-deoxychorismate lyase; structural genomi 4e-48
3csw_A285 BCAT, putative branched-chain-amino-acid aminotran 2e-46
1i2k_A269 4-amino-4-deoxychorismate lyase; pyridoxal phospha 1e-43
2xpf_A292 4-amino-4-deoxychorismate lyase; para-aminobenzoic 4e-41
2zgi_A246 Putative 4-amino-4-deoxychorismate lyase; TTHA0621 8e-41
3daa_A277 D-amino acid aminotransferase; pyridoxal phosphate 1e-40
3qqm_A221 MLR3007 protein; structural genomics, joint center 4e-26
3ceb_A194 D-aminoacid aminotransferase-like PLP-dependent E; 3e-16
>2a1h_A Branched chain aminotransferase; fold type IV; HET: PLP GBN; 1.80A {Homo sapiens} SCOP: e.17.1.1 PDB: 1ekp_A* 1ekv_A* 1ekf_A* 1kta_A* 1kt8_A* 2hhf_B* 2hhf_A* 2hgw_A* 2hg8_A* 2hgx_A* 2hdk_A* Length = 365 Back     alignment and structure
>2coi_A Branched chain aminotransferase 1, cytosolic; PLP-dependent enzyme; HET: PLP GBN; 1.90A {Homo sapiens} PDB: 2cog_A* 2coj_A* 2abj_A* Length = 386 Back     alignment and structure
>1iye_A Branched-chain amino acid aminotransferase; hexamer, PLP; HET: PGU; 1.82A {Escherichia coli} SCOP: e.17.1.1 PDB: 1i1l_A* 1i1m_A* 1iyd_A* 1i1k_A* 1a3g_A* Length = 309 Back     alignment and structure
>3sno_A Hypothetical aminotransferase; D-aminoacid aminotransferase-like PLP-dependent enzymes, STR genomics; HET: MSE; 1.60A {Corynebacterium glutamicum} Length = 315 Back     alignment and structure
>3u0g_A Putative branched-chain amino acid aminotransfera; structural genomics, seattle structural genomics center for infectious disease; 1.90A {Burkholderia pseudomallei} Length = 328 Back     alignment and structure
>2eiy_A ILVE, branched-chain amino acid aminotransferase; PLP-dependent enzyme; HET: PLP; 1.35A {Thermus thermophilus} PDB: 1wrv_A* 2ej0_A* 2ej2_A* 2ej3_A* Length = 308 Back     alignment and structure
>3lul_A 4-amino-4-deoxychorismate lyase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, pyridoxal phosphate; HET: MSE LLP; 1.78A {Legionella pneumophila} Length = 272 Back     alignment and structure
>3csw_A BCAT, putative branched-chain-amino-acid aminotransfera; TM0831, putative branched-chain amino acid aminotransferase; HET: PLP CIT; 2.15A {Thermotoga maritima MSB8} Length = 285 Back     alignment and structure
>1i2k_A 4-amino-4-deoxychorismate lyase; pyridoxal phosphate, PABC; HET: PLP; 1.79A {Escherichia coli} SCOP: e.17.1.1 PDB: 1et0_A* 1i2l_A* Length = 269 Back     alignment and structure
>2zgi_A Putative 4-amino-4-deoxychorismate lyase; TTHA0621, PLP cofactor, pyridoxal enzyme, structural NPPSFA; HET: PLP PGE; 1.93A {Thermus thermophilus} Length = 246 Back     alignment and structure
>3daa_A D-amino acid aminotransferase; pyridoxal phosphate, transaminase; HET: PDD; 1.90A {Bacillus SP} SCOP: e.17.1.1 PDB: 4daa_A* 3lqs_A* 1daa_A* 2daa_A* 5daa_A* 1g2w_A* 1a0g_A* 2dab_A* Length = 277 Back     alignment and structure
>3qqm_A MLR3007 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, transferase; HET: LLP; 2.30A {Mesorhizobium loti} Length = 221 Back     alignment and structure
>3ceb_A D-aminoacid aminotransferase-like PLP-dependent E; joint center for structural genomics, protein structure initiative, PSI-2, lyase; HET: LLP; 2.40A {Haemophilus somnus} Length = 194 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query367
3dth_A372 Branched-chain amino acid aminotransferase; open t 100.0
3dtg_A372 Branched-chain amino acid aminotransferase; open t 100.0
3uzo_A358 Branched-chain-amino-acid aminotransferase; BCAT, 100.0
2coi_A386 Branched chain aminotransferase 1, cytosolic; PLP- 100.0
4dqn_A345 Putative branched-chain amino acid aminotransfera; 100.0
2a1h_A365 Branched chain aminotransferase; fold type IV; HET 100.0
3u0g_A328 Putative branched-chain amino acid aminotransfera; 100.0
2eiy_A308 ILVE, branched-chain amino acid aminotransferase; 100.0
1iye_A309 Branched-chain amino acid aminotransferase; hexame 100.0
3daa_A277 D-amino acid aminotransferase; pyridoxal phosphate 100.0
1i2k_A269 4-amino-4-deoxychorismate lyase; pyridoxal phospha 100.0
3lul_A272 4-amino-4-deoxychorismate lyase; structural genomi 100.0
2xpf_A292 4-amino-4-deoxychorismate lyase; para-aminobenzoic 100.0
3sno_A315 Hypothetical aminotransferase; D-aminoacid aminotr 100.0
3csw_A285 BCAT, putative branched-chain-amino-acid aminotran 100.0
2zgi_A246 Putative 4-amino-4-deoxychorismate lyase; TTHA0621 100.0
3qqm_A221 MLR3007 protein; structural genomics, joint center 100.0
3ceb_A194 D-aminoacid aminotransferase-like PLP-dependent E; 100.0
>3dtg_A Branched-chain amino acid aminotransferase; open twisted alpha/beta; HET: PLP; 1.90A {Mycobacterium smegmatis} PDB: 3dtf_A* 3jz6_A* 3ht5_A* Back     alignment and structure
>3uzo_A Branched-chain-amino-acid aminotransferase; BCAT, amino-acid biosynthesis, branched-CH acid biosynthesis, pyridoxal phosphate, L-GLUT; HET: PLP GLU; 2.00A {Deinococcus radiodurans} PDB: 3uzb_A* 3uyy_A* Back     alignment and structure
>2coi_A Branched chain aminotransferase 1, cytosolic; PLP-dependent enzyme; HET: PLP GBN; 1.90A {Homo sapiens} PDB: 2cog_A* 2coj_A* 2abj_A* Back     alignment and structure
>4dqn_A Putative branched-chain amino acid aminotransfera; aminotransferase, transferase; 1.97A {Streptococcus mutans} Back     alignment and structure
>2a1h_A Branched chain aminotransferase; fold type IV; HET: PLP GBN; 1.80A {Homo sapiens} SCOP: e.17.1.1 PDB: 1ekp_A* 1ekv_A* 1ekf_A* 1kta_A* 1kt8_A* 2hhf_B* 2hhf_A* 2hgw_A* 2hg8_A* 2hgx_A* 2hdk_A* Back     alignment and structure
>3u0g_A Putative branched-chain amino acid aminotransfera; structural genomics, seattle structural genomics center for infectious disease; 1.90A {Burkholderia pseudomallei} Back     alignment and structure
>2eiy_A ILVE, branched-chain amino acid aminotransferase; PLP-dependent enzyme; HET: PLP; 1.35A {Thermus thermophilus} PDB: 1wrv_A* 2ej0_A* 2ej2_A* 2ej3_A* Back     alignment and structure
>1iye_A Branched-chain amino acid aminotransferase; hexamer, PLP; HET: PGU; 1.82A {Escherichia coli} SCOP: e.17.1.1 PDB: 1i1l_A* 1i1m_A* 1iyd_A* 1i1k_A* 1a3g_A* Back     alignment and structure
>3daa_A D-amino acid aminotransferase; pyridoxal phosphate, transaminase; HET: PDD; 1.90A {Bacillus SP} SCOP: e.17.1.1 PDB: 4daa_A* 3lqs_A* 1daa_A* 2daa_A* 5daa_A* 1g2w_A* 1a0g_A* 2dab_A* Back     alignment and structure
>1i2k_A 4-amino-4-deoxychorismate lyase; pyridoxal phosphate, PABC; HET: PLP; 1.79A {Escherichia coli} SCOP: e.17.1.1 PDB: 1et0_A* 1i2l_A* Back     alignment and structure
>3lul_A 4-amino-4-deoxychorismate lyase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, pyridoxal phosphate; HET: MSE LLP; 1.78A {Legionella pneumophila} Back     alignment and structure
>3sno_A Hypothetical aminotransferase; D-aminoacid aminotransferase-like PLP-dependent enzymes, STR genomics; HET: MSE; 1.60A {Corynebacterium glutamicum} Back     alignment and structure
>3csw_A BCAT, putative branched-chain-amino-acid aminotransfera; TM0831, putative branched-chain amino acid aminotransferase; HET: PLP CIT; 2.15A {Thermotoga maritima MSB8} Back     alignment and structure
>2zgi_A Putative 4-amino-4-deoxychorismate lyase; TTHA0621, PLP cofactor, pyridoxal enzyme, structural NPPSFA; HET: PLP PGE; 1.93A {Thermus thermophilus} Back     alignment and structure
>3qqm_A MLR3007 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, transferase; HET: LLP; 2.30A {Mesorhizobium loti} Back     alignment and structure
>3ceb_A D-aminoacid aminotransferase-like PLP-dependent E; joint center for structural genomics, protein structure initiative, PSI-2, lyase; HET: LLP; 2.40A {Haemophilus somnus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 367
d2a1ha1363 e.17.1.1 (A:3-365) Branched-chain aminoacid aminot 4e-68
d1iyea_304 e.17.1.1 (A:) Branched-chain aminoacid aminotransf 1e-45
d1daaa_277 e.17.1.1 (A:) D-aminoacid aminotransferase {Bacill 3e-28
d1i2ka_269 e.17.1.1 (A:) Aminodeoxychorismate lyase {Escheric 1e-24
>d2a1ha1 e.17.1.1 (A:3-365) Branched-chain aminoacid aminotransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 363 Back     information, alignment and structure

class: Multi-domain proteins (alpha and beta)
fold: D-aminoacid aminotransferase-like PLP-dependent enzymes
superfamily: D-aminoacid aminotransferase-like PLP-dependent enzymes
family: D-aminoacid aminotransferase-like PLP-dependent enzymes
domain: Branched-chain aminoacid aminotransferase
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

 Score =  216 bits (551), Expect = 4e-68
 Identities = 96/316 (30%), Positives = 161/316 (50%), Gaps = 13/316 (4%)

Query: 59  LDWDNLGFSIKPADYMYTMKCSKHENFKQGQLSRYANIELSPSAAVLNYGQGVYEGTKAY 118
              + L F     D+M  ++ +    + Q ++  + N+ L P+++ L+Y   ++EG KA+
Sbjct: 21  GPGEPLVFGKTFTDHMLMVEWNDKG-WGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAF 79

Query: 119 RTEDGRILLFRPDLNASRMKIGAERMCMPSPSVDQFVDAVKQIALANKRWVPPPGKGTLY 178
           + +D ++ LFRP LN  RM   A R+C+PS    + ++ ++++   +K WVP     +LY
Sbjct: 80  KGKDQQVRLFRPWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLY 139

Query: 179 IRPLLIGSGPVLGLGPAPEYTFLAYASPVGNYFKEGSA-PLNLYIEEEFVRAAPGGAGGV 237
           +RP+LIG+ P LG+             PVG YF  GS  P++L  +  F+RA  GG G  
Sbjct: 140 VRPVLIGNEPSLGVSQPRRALLFVILCPVGAYFPGGSVTPVSLLADPAFIRAWVGGVGNY 199

Query: 238 KAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGN----VISTPAT 293
           K   NY P +     A  RG   VL+L   + +  E  +               + TP  
Sbjct: 200 KLGGNYGPTVLVQQEALKRGCEQVLWLYGPDHQLTEVGTMNIFVYWTHEDGVLELVTPPL 259

Query: 294 NGTILEGITRRSVIEIARDYG-YQVEERVIPVDELINA------DQVFCTGTAVVVAPVG 346
           NG IL G+ R+S++++A+ +G ++V ER I + +L+ A       +VF +GTA  V PV 
Sbjct: 260 NGVILPGVVRQSLLDMAQTWGEFRVVERTITMKQLLRALEEGRVREVFGSGTACQVCPVH 319

Query: 347 SITYQNKRVEFKTGSR 362
            I Y+++ +   T   
Sbjct: 320 RILYKDRNLHIPTMEN 335
>d1iyea_ e.17.1.1 (A:) Branched-chain aminoacid aminotransferase {Escherichia coli [TaxId: 562]} Length = 304 Back     information, alignment and structure
>d1daaa_ e.17.1.1 (A:) D-aminoacid aminotransferase {Bacillus sp., strain YM-1 [TaxId: 1409]} Length = 277 Back     information, alignment and structure
>d1i2ka_ e.17.1.1 (A:) Aminodeoxychorismate lyase {Escherichia coli [TaxId: 562]} Length = 269 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query367
d2a1ha1363 Branched-chain aminoacid aminotransferase {Human ( 100.0
d1iyea_304 Branched-chain aminoacid aminotransferase {Escheri 100.0
d1daaa_277 D-aminoacid aminotransferase {Bacillus sp., strain 100.0
d1i2ka_269 Aminodeoxychorismate lyase {Escherichia coli [TaxI 100.0
>d2a1ha1 e.17.1.1 (A:3-365) Branched-chain aminoacid aminotransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Back     information, alignment and structure
class: Multi-domain proteins (alpha and beta)
fold: D-aminoacid aminotransferase-like PLP-dependent enzymes
superfamily: D-aminoacid aminotransferase-like PLP-dependent enzymes
family: D-aminoacid aminotransferase-like PLP-dependent enzymes
domain: Branched-chain aminoacid aminotransferase
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=100.00  E-value=4.5e-74  Score=566.31  Aligned_cols=307  Identities=33%  Similarity=0.595  Sum_probs=286.6

Q ss_pred             CCCCCCCCCccccCCceEEEEEcCCceeeCCeeeeCCCcccCccCccccccCeEEEEEEEEeecCCeEEEeChHhHHHHH
Q 036241           58 DLDWDNLGFSIKPADYMYTMKCSKHENFKQGQLSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRPDLNASRM  137 (367)
Q Consensus        58 ~~~~~~l~f~~~~td~~~~~~~~~~~~w~ng~i~p~~~~~i~~~~~~l~yG~~vFEt~ka~~~~dG~i~lFr~d~Hl~RL  137 (367)
                      ..+.++|+||++|||||++++|++ ++|.||+|+|+++++|||+|++|||||+||||||+|+++||++++||||+|++||
T Consensus        20 ~~~~~~~~f~~~~~d~m~~~~~~~-~~W~ng~ivp~~~~~isp~~~~l~YG~gvFEgiR~y~~~~g~i~lFrld~Hl~RL   98 (363)
T d2a1ha1          20 PGPGEPLVFGKTFTDHMLMVEWND-KGWGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFKGKDQQVRLFRPWLNMDRM   98 (363)
T ss_dssp             CCTTSCCCTTCSCCSEEEEEEEET-TEECCCEEEESCCEEECTTBHHHHSCCEEECCEEEEECTTSCEEEESHHHHHHHH
T ss_pred             CCCcccCCCCCcccceEEEEEecC-CeeeCCEEeEcccceeCcchhhccccceeeeeEEEEECCCCCEEEEccHHHHHHH
Confidence            346899999999999999999996 5899999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcCCCCCCHHHHHHHHHHHHHHcCCCCCCCCCceEEEEEEEEecCCcccccCCCceEEEEEEeccCCcccCC-Cc
Q 036241          138 KIGAERMCMPSPSVDQFVDAVKQIALANKRWVPPPGKGTLYIRPLLIGSGPVLGLGPAPEYTFLAYASPVGNYFKEG-SA  216 (367)
Q Consensus       138 ~~Sa~~l~~p~~~~e~l~~~i~~lv~~~~~~vP~~~~~~lyIRp~~~g~~~~lg~~~~~~~~~~I~~~P~~~~~~~g-~~  216 (367)
                      ++||++++|+.++.+++.++|.++++.|..|+|......+||||++++.++.+++.++..+.+++++.|...++..+ .+
T Consensus        99 ~~Sa~~l~~~~~~~~~~~~~i~~~v~~n~~~v~~~~~~~~yiR~~v~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~  178 (363)
T d2a1ha1          99 LRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSLGVSQPRRALLFVILCPVGAYFPGGSVT  178 (363)
T ss_dssp             HHHHHHTTCCCCCHHHHHHHHHHHHHHTGGGSCCSTTCEEEEEEEEEECCBCCSCSCCSEEEEEEEEEEECCSSSSSSCC
T ss_pred             HHHHHHhCCCCCChHHHHHHHHHHHHHHHhhccccccccEEEEEeeccCCccccccCCcccceeEEEeeccccCcccccc
Confidence            99999999998899999999999999999999988778999999999888888999988888888888888777654 57


Q ss_pred             cEEEEeecceeecCCCCCCCcccccCchHHHHHHHHHHhCCCceEEEEeccCCCeEEecCceeEEEEECC-----EEEcc
Q 036241          217 PLNLYIEEEFVRAAPGGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGN-----VISTP  291 (367)
Q Consensus       217 ~v~l~v~~~~~R~~p~g~g~~Kt~~nY~~~~~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~-----~l~TP  291 (367)
                      +..+.+.+.+.|.+|.+++.+|.++||+++++|.++|+++||||+||||.. +|+|+|++++|+|+++++     +++||
T Consensus       179 ~~~~~~~~~~~r~~~~~~~~~k~~~ny~~~~la~~eA~~~G~de~l~L~~~-dg~v~E~~~sNiF~v~~~kdG~~~l~tp  257 (363)
T d2a1ha1         179 PVSLLADPAFIRAWVGGVGNYKLGGNYGPTVLVQQEALKRGCEQVLWLYGP-DHQLTEVGTMNIFVYWTHEDGVLELVTP  257 (363)
T ss_dssp             CEEEEECTTCCSCCTTSSTTSCBGGGTTTHHHHHHHHHHTTCSEEEEEETT-TTEEEEETTEEEEEEEECTTSCEEEEEC
T ss_pred             ceeEEEeeeccccCccccccccccccccchhhHHHHhhcCCceeeeecccc-cceEEeccceEEEEEEecCCCcEEEEec
Confidence            788888888999999999999999999999999999999999999999863 799999999999999765     69999


Q ss_pred             CCCCCCccchHHHHHHHHHHHCC-CcEEEEEeCHHHHhhc------ceeEEEccccceEEeEEEEECCEEEEeCCC-ccc
Q 036241          292 ATNGTILEGITRRSVIEIARDYG-YQVEERVIPVDELINA------DQVFCTGTAVVVAPVGSITYQNKRVEFKTG-SRS  363 (367)
Q Consensus       292 ~l~~~ILpGITR~sil~la~~~G-~~V~Er~i~~~eL~~a------dEvf~~gTa~~I~PV~~I~~~g~~~~~~~~-~G~  363 (367)
                      |++++|||||||++||++|+++| ++|+||+|+++||.+|      ||||+|||+++|+||.+|.++++.+.+++| +||
T Consensus       258 pl~~~ILpGITR~~Viela~~~g~i~V~Er~i~~~eL~~A~~~~~~dEvF~tgTa~~I~PV~~I~~~~~~~~i~~g~~g~  337 (363)
T d2a1ha1         258 PLNGVILPGVVRQSLLDMAQTWGEFRVVERTITMKQLLRALEEGRVREVFGSGTACQVCPVHRILYKDRNLHIPTMENGP  337 (363)
T ss_dssp             CCSSSSCCCHHHHHHHHHHHHHTSSEEEECCCBHHHHHHHHHTTCEEEEEEEETTTEEEEEEEEEETTEEEECTTGGGTT
T ss_pred             cccccccCchHHHHHHHHHHHcCCCceeecCCCHHHHHhHhhcCCccEEEEcCCCcEEEEEEEEEeCCceEEeCCCCcCH
Confidence            99999999999999999999997 9999999999999999      999999999999999999999999999988 786


Q ss_pred             -ccc
Q 036241          364 -VYQ  366 (367)
Q Consensus       364 -vt~  366 (367)
                       +|+
T Consensus       338 ~it~  341 (363)
T d2a1ha1         338 ELIL  341 (363)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence             775
>d1iyea_ e.17.1.1 (A:) Branched-chain aminoacid aminotransferase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1daaa_ e.17.1.1 (A:) D-aminoacid aminotransferase {Bacillus sp., strain YM-1 [TaxId: 1409]} Back     information, alignment and structure
>d1i2ka_ e.17.1.1 (A:) Aminodeoxychorismate lyase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure