Citrus Sinensis ID: 037144

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500--
Protein Sequence
MDQAYAQEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEAF
Secondary Structure (PSIPRED)
cccccHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHcccccccccccHHHHHHHHHHHHcccccccccccccEEccccccHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHcccccccccccccccEEcccHHHHHHHHHHHHHHHHHHHHcccccccEEEEEcccccHHHHHHHHHcccccccEEEEEccccccccccHHHHHHHHHHHHHccccEEEEEEcccccccccccccHHHHHHHHHcccEEEEcccccccccccccccccccccccccEEEEccccccccccccEEEEEEccHHHHHHHcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEccccEEEEEEEEccccccHHHHHcccccccccccccccHHHHHHHHHHHHHHHHccccEEEEEEEEccEEEEEEEcccccccHHHHHHHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHcccccccccccHHHHHHHHHHHcccccccccccccEEEccccccHHHHHHHHHHHHHHHHcHHHcccHHHHHHHHHHHHHHHHHHcccHHHHcccccccEEEccHHHHHHHHHHHHHHHHHHHHHHHHHcHEEEEEccHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHccccEEEEEEEcccccccccccHHHHHHHHHHccEEEEEEEHHcccccccHHHHHHHccHHEHcccccccccEEEEEccccEEEEccHHHHHHHHcccHHHHHccccccccccccEcccccccccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHccccEEEEccEEEEEEEEEEcccccccccccccccEEEEEEccccccccccHHHHHHHHHHHccccEEEEEEEEccEEEEEEEEEcccccHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MDQAYAQEFRRQGHMFVDFMAEYYknidkypvrsqvepgylkkrlpesapyspesVETILQDVQEHivpgithwqspnyfayfpatssvAGIVGEMLSSGfnvvgldwisspaavELENIVMDWLGQmldlpksflfsgngggviqgTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVgidrkniraikttksssyglsaeSVLSQINLDVEAELIPLFLcatvgttaitavdplkplcdvakQFGIWVHVDAAyagsacicpefrhfidgvecvdsfsfnphkwlfttldccclwvkdpscllstlstnpqylkneatdqepkeqevgykdWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCfrvtpsavMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEAF
Flexible Loop (DISEMBL)
MDQAYAqefrrqghMFVDFMAEYYknidkypvrsQVEPGYLKKRLPESAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKaaqivgidrknIRAIKttksssyglsaESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKneatdqepkeqevgykdwQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVafprnfslvcfrvtpsavmdklrtkykngtydqyrqfseeerTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEAF
Low Complexity Region (SEG)
MDQAYAQEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGttceallctltaaRDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEAF
Disordered region (IsUnstruct)
*********RRQGHMFVDFMAEYYKNIDKYPVRSQVEPGY***************VETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLST******************VGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQF*******EFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQ******
Disordered Region (DISOPRED)
****YAQEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPE***YSPESVETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA*
Disordered Region (DISEMBL)
********FRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLP*********VETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNE**********VGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEAF
Disordered Region (DISPRO)
*DQAYAQEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQ*PKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEAF
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDQAYAQEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEAF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	502	2.2.26 [Sep-21-2011]
P54769	531	Tyrosine/DOPA decarboxyla	N/A	no	0.978	0.924	0.647	0.0
P54770	533	Tyrosine/DOPA decarboxyla	N/A	no	0.978	0.921	0.645	0.0
P54771	523	Tyrosine/DOPA decarboxyla	N/A	no	0.962	0.923	0.659	0.0
P54768	518	Tyrosine/DOPA decarboxyla	N/A	no	0.960	0.930	0.655	0.0
Q06088	508	Tyrosine decarboxylase 4	N/A	no	0.962	0.950	0.619	0.0
Q06087	516	Tyrosine decarboxylase 3	N/A	no	0.962	0.936	0.619	0.0
Q06086	514	Tyrosine decarboxylase 2	N/A	no	0.962	0.939	0.619	0.0
Q06085	432	Tyrosine decarboxylase 1	N/A	no	0.860	1.0	0.636	1e-167
P17770	500	Aromatic-L-amino-acid dec	N/A	no	0.932	0.936	0.546	1e-164
Q9M0G4	545	Probable tyrosine decarbo	yes	no	0.944	0.869	0.532	1e-160

>sp|P54769|TYDC2_PAPSO Tyrosine/DOPA decarboxylase 2 OS=Papaver somniferum GN=TYDC2 PE=2 SV=1

 Score =  709 bits (1831), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 322/497 (64%), Positives = 402/497 (80%), Gaps = 6/497 (1%)

Query: 7   QEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQEH 66
           +EFRRQGHM +DF+A+YY++++KYPVRSQVEPGYL+KRLPE+APY+PES+ETILQDV   
Sbjct: 25  EEFRRQGHMIIDFLADYYRDVEKYPVRSQVEPGYLRKRLPETAPYNPESIETILQDVTTE 84

Query: 67  IVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLG 126
           I+PG+THWQSPNY+AYFP++ SVAG +GEMLS+GFNVVG +W+SSPAA ELE++VMDW G
Sbjct: 85  IIPGLTHWQSPNYYAYFPSSGSVAGFLGEMLSTGFNVVGFNWMSSPAATELESVVMDWFG 144

Query: 127 QMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHC 186
           +ML+LP+SFLFSG+GGGV+QGT+CEA+LCTLTAARDR L KIGRE+I +LVVY SDQTHC
Sbjct: 145 KMLNLPESFLFSGSGGGVLQGTSCEAILCTLTAARDRKLNKIGREHIGRLVVYGSDQTHC 204

Query: 187 AFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAI 246
           A QKAAQ+ GI+ KN RAIKT K +S+GLSA ++   I  D+EA LIPLF+C TVGTT+ 
Sbjct: 205 ALQKAAQVAGINPKNFRAIKTFKENSFGLSAATLREVILEDIEAGLIPLFVCPTVGTTSS 264

Query: 247 TAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT 306
           TAVDP+ P+C+VAK++ +WVHVDAAYAGSACICPEFRHFIDGVE  DSFS N HKW FTT
Sbjct: 265 TAVDPISPICEVAKEYEMWVHVDAAYAGSACICPEFRHFIDGVEEADSFSLNAHKWFFTT 324

Query: 307 LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVV 366
           LDCCCLWVKDPS L+  LSTNP+YL+N+AT+     Q V YKDWQI L RRFRSLKLW+V
Sbjct: 325 LDCCCLWVKDPSALVKALSTNPEYLRNKATES---RQVVDYKDWQIALSRRFRSLKLWMV 381

Query: 367 IRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPS---AVMDKL 423
           +R++GV NLRNF+RSHV MAK FE L+  D RFE+  PR F++VCFR+ P     V D  
Sbjct: 382 LRSYGVTNLRNFLRSHVKMAKTFEGLICMDGRFEITVPRTFAMVCFRLLPPKTIKVYDNG 441

Query: 424 RTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMT 483
             +  NG      +       N+ N+  LE++N +G V+MTHA+VGG+Y++RFA G+++T
Sbjct: 442 VHQNGNGVVPLRDENENLVLANKLNQVYLETVNATGSVYMTHAVVGGVYMIRFAVGSTLT 501

Query: 484 MESHVRAAWTVVQEHLE 500
            E HV  AW ++QEH +
Sbjct: 502 EERHVIYAWKILQEHAD 518

Marginally higher substrate specificity for L-DOPA over L-tyrosine.
Papaver somniferum (taxid: 3469)
EC: 4EC: .EC: 1EC: .EC: 1EC: .EC: 2EC: 5

>sp|P54770|TYDC3_PAPSO Tyrosine/DOPA decarboxylase 3 OS=Papaver somniferum GN=TYDC3 PE=2 SV=2

 Score =  707 bits (1825), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 322/499 (64%), Positives = 403/499 (80%), Gaps = 8/499 (1%)

Query: 7   QEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQEH 66
           +EFRRQGHM +DF+A+YY++++KYPVRSQVEPGYL+KRLPE+APY+PES+ETILQDV   
Sbjct: 25  EEFRRQGHMIIDFLADYYRDVEKYPVRSQVEPGYLRKRLPETAPYNPESIETILQDVTSE 84

Query: 67  IVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLG 126
           I+PG+THWQSPNY+AYFP++ SVAG +GEMLS+GFNVVG +W+SSPAA ELE IVMDW G
Sbjct: 85  IIPGLTHWQSPNYYAYFPSSGSVAGFLGEMLSTGFNVVGFNWMSSPAATELEGIVMDWFG 144

Query: 127 QMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHC 186
           +ML+LPKS+LFSG GGGV+QGTTCEA+LCTLTAARDR L KIGRE+I +LVVY SDQTHC
Sbjct: 145 KMLNLPKSYLFSGTGGGVLQGTTCEAILCTLTAARDRKLNKIGREHIGRLVVYGSDQTHC 204

Query: 187 AFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAI 246
           A QKAAQI GI+ KN RA+KT K++S+GL+A ++   I  D+EA LIPLF+C TVGTT+ 
Sbjct: 205 ALQKAAQIAGINPKNFRAVKTFKANSFGLAASTLREVILEDIEAGLIPLFVCPTVGTTSS 264

Query: 247 TAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT 306
           TAVDP+ P+C+VAK++ +WVH+DAAYAGSACICPEFRHFIDGVE  DSFS N HKW FTT
Sbjct: 265 TAVDPIGPICEVAKEYEMWVHIDAAYAGSACICPEFRHFIDGVEEADSFSLNAHKWFFTT 324

Query: 307 LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVV 366
           LDCCCLWVKDPS L+  LSTNP+YL+N+AT+     Q V YKDWQI L RRFRS+KLW+V
Sbjct: 325 LDCCCLWVKDPSSLVKALSTNPEYLRNKATES---RQVVDYKDWQIALIRRFRSMKLWMV 381

Query: 367 IRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVM----DK 422
           +R++GV NLRNF+RSHV MAK FE LV +D+RFE+  PR F++VCFR+ P   +    + 
Sbjct: 382 LRSYGVTNLRNFLRSHVRMAKTFEGLVGADRRFEITVPRTFAMVCFRLLPPTTVKVCGEN 441

Query: 423 LRTKYKNGTYDQYRQFSEE-ERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNS 481
              +  NG     R  +EE    N+ N+  L  +  +G V+MTHA+VGG+Y++RFA G++
Sbjct: 442 GVHQNGNGVIAVLRNENEELVLANKLNQVYLRQVKATGSVYMTHAVVGGVYMIRFAVGST 501

Query: 482 MTMESHVRAAWTVVQEHLE 500
           +T E HV  AW V+QEH +
Sbjct: 502 LTEERHVIHAWEVLQEHAD 520

Marginally higher substrate specificity for L-DOPA over L-tyrosine.

Papaver somniferum (taxid: 3469)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 5

>sp|P54771|TYDC5_PAPSO Tyrosine/DOPA decarboxylase 5 OS=Papaver somniferum GN=TYDC5 PE=2 SV=1

 Score =  703 bits (1815), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/502 (65%), Positives = 407/502 (81%), Gaps = 19/502 (3%)

Query: 8   EFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQEHI 67
           EFRRQGHM +DF+A+YYKN+ K   RSQ  PG  ++ LPE+AP   ES+ETILQDVQ  I
Sbjct: 24  EFRRQGHMIIDFLADYYKNV-KVSSRSQANPGS-QQTLPETAPNHSESIETILQDVQNDI 81

Query: 68  VPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQ 127
           +PGITHWQSPNYFAYFP++ SVAG +GEMLSSGFNVVG +W+SSPAA ELE+IVM+WLGQ
Sbjct: 82  IPGITHWQSPNYFAYFPSSGSVAGFLGEMLSSGFNVVGFNWMSSPAATELESIVMNWLGQ 141

Query: 128 MLDLPKSFLFSGN------GGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSS 181
           ML+LPKSFLFS +      GGGV+QGTTCEA+LCTLTA+RD++L KIGRENI+KLVVY+S
Sbjct: 142 MLNLPKSFLFSSDDNAGSSGGGVLQGTTCEAILCTLTASRDKMLNKIGRENINKLVVYAS 201

Query: 182 DQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATV 241
           DQTHCA QKAAQI GI+ KN RAI T+K++ +GLS +++LS I  D+E+ L+PLFLCATV
Sbjct: 202 DQTHCALQKAAQIAGINPKNFRAIATSKATDFGLSPQALLSTILADIESGLVPLFLCATV 261

Query: 242 GTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHK 301
           GTT+ TAVDP+ PLC+VAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE  DSFS N HK
Sbjct: 262 GTTSSTAVDPIGPLCEVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEEADSFSLNAHK 321

Query: 302 WLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSL 361
           W FTTLDCCCLWVKD + L+  LST+P+YLKN+ATD    +Q + YKDWQI L RRFRS+
Sbjct: 322 WFFTTLDCCCLWVKDSNALVKALSTSPEYLKNKATDS---KQVIDYKDWQIALSRRFRSM 378

Query: 362 KLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMD 421
           KLW+V+R++GVANLR+F+RSHV MAK F+ L+  DKRFE+  P  F++VCFR+ P+A+ +
Sbjct: 379 KLWLVLRSYGVANLRSFLRSHVKMAKHFDGLIAMDKRFEIVVPNTFAMVCFRLKPAAIFN 438

Query: 422 -KLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGN 480
            KL    +NG    Y     EE+TNE N +LLES+N SG ++MTHA+VGG+Y++RFA G 
Sbjct: 439 GKLG---ENGV--DYNCI--EEKTNEINSKLLESVNASGSIYMTHAVVGGVYMIRFAVGA 491

Query: 481 SMTMESHVRAAWTVVQEHLEAF 502
           ++T E HV  AW V+QEH +A 
Sbjct: 492 TLTEERHVSMAWKVIQEHTDAI 513

May play an important role in providing precursors for alkaloid synthesis in the roots and germinating seedlings.

Papaver somniferum (taxid: 3469)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 5

>sp|P54768|TYDC1_PAPSO Tyrosine/DOPA decarboxylase 1 OS=Papaver somniferum GN=TYDC1 PE=2 SV=1

 Score =  699 bits (1805), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/499 (65%), Positives = 403/499 (80%), Gaps = 17/499 (3%)

Query: 8   EFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQEHI 67
           EFRRQGHM +DF+A+YYKN++KYPVR+QV+PGYLKKRLPESAPY+PES+ETIL+DV   I
Sbjct: 24  EFRRQGHMIIDFLADYYKNVEKYPVRTQVDPGYLKKRLPESAPYNPESIETILEDVTNDI 83

Query: 68  VPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQ 127
           +PG+THWQSPNYFAYFP++ S+AG +GEMLS+GFNVVG +W+SSPAA ELE+IVM+WLGQ
Sbjct: 84  IPGLTHWQSPNYFAYFPSSGSIAGFLGEMLSTGFNVVGFNWMSSPAATELESIVMNWLGQ 143

Query: 128 MLDLPKSFLFSGNGGG----VIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQ 183
           ML LPKSFLFS +G      V+QGTTCEA+LCTLTAARD++L KIGRENI+KLVVY+SDQ
Sbjct: 144 MLTLPKSFLFSSDGSSGGGGVLQGTTCEAILCTLTAARDKMLNKIGRENINKLVVYASDQ 203

Query: 184 THCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGT 243
           T  A QKAAQI GI+ KN  AI T+K++++GLS  S+ S I  D+E+ L+PLFLCATVGT
Sbjct: 204 TLSALQKAAQIAGINPKNFLAIATSKATNFGLSPNSLQSTILADIESGLVPLFLCATVGT 263

Query: 244 TAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWL 303
           T+ TAVDP+ PLC VAK  GIWVH+DAAYAGSACICPEFRHFIDGVE  DSFS N HKW 
Sbjct: 264 TSSTAVDPIGPLCAVAKLHGIWVHIDAAYAGSACICPEFRHFIDGVEDADSFSLNAHKWF 323

Query: 304 FTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKL 363
           FTTLDCCCLWVKD   L+  LST+P+YLKN+ATD    +Q + YKDWQI L RRFRS+KL
Sbjct: 324 FTTLDCCCLWVKDSDSLVKALSTSPEYLKNKATDS---KQVIDYKDWQIALSRRFRSMKL 380

Query: 364 WVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKL 423
           W+V+R++G+ANLR F+RSHV MAK F+ L+  D RFE+  PR F++VCFR+ P+A+  K 
Sbjct: 381 WLVLRSYGIANLRTFLRSHVKMAKHFQGLIGMDNRFEIVVPRTFAMVCFRLKPAAIFRKK 440

Query: 424 RTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMT 483
             +      D +     E +TNE N +LLES+N SGK++MTHA+VGG+Y++RFA G ++T
Sbjct: 441 IVE------DDHI----EAQTNEVNAKLLESVNASGKIYMTHAVVGGVYMIRFAVGATLT 490

Query: 484 MESHVRAAWTVVQEHLEAF 502
            E HV  AW VVQEH +A 
Sbjct: 491 EERHVTGAWKVVQEHTDAI 509

Marginally higher substrate specificity for L-DOPA over L-tyrosine.

Papaver somniferum (taxid: 3469)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 5

>sp|Q06088|TYDC4_PETCR Tyrosine decarboxylase 4 OS=Petroselinum crispum GN=TYRDC-4 PE=2 SV=1

 Score =  646 bits (1667), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 311/502 (61%), Positives = 391/502 (77%), Gaps = 19/502 (3%)

Query: 1   MDQAYAQEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETIL 60
           M+    +EFRRQGH+ +DF+A+YY+ ++ YPVRSQV PGYL++ LPESAPY+PES+ETIL
Sbjct: 18  MNTLEPEEFRRQGHLMIDFLADYYRKVENYPVRSQVSPGYLREILPESAPYNPESLETIL 77

Query: 61  QDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENI 120
           QDVQ  I+PGITHWQSPN+FAYFP++ S AG +GEMLS+GFNVVG +W+ SPAA ELEN+
Sbjct: 78  QDVQTKIIPGITHWQSPNFFAYFPSSGSTAGFLGEMLSTGFNVVGFNWMVSPAATELENV 137

Query: 121 VMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYS 180
           V DW G+ML LPKSFLFSG GGGV+QGTTCEA+LCTL AARD+ L++ G +NI KLVVY 
Sbjct: 138 VTDWFGKMLQLPKSFLFSGGGGGVLQGTTCEAILCTLVAARDKNLRQHGMDNIGKLVVYC 197

Query: 181 SDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCAT 240
           SDQTH A QKAA+I GID KN RAI+TTKSS++ L  + + S I  D++  LIPL+LCAT
Sbjct: 198 SDQTHSALQKAAKIAGIDPKNFRAIETTKSSNFKLCPKRLESAILYDLQNGLIPLYLCAT 257

Query: 241 VGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPH 300
           VGTT+ T VDPL  L +VAK++ +WVHVDAAYAGSACICPEFR ++DGVE  DSFS N H
Sbjct: 258 VGTTSSTTVDPLPALTEVAKKYDLWVHVDAAYAGSACICPEFRQYLDGVENADSFSLNAH 317

Query: 301 KWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRS 360
           KW  TTLDCCCLWV+DPS L+ +LST P++LKN A++     + V YKDWQI L RRFR+
Sbjct: 318 KWFLTTLDCCCLWVRDPSALIKSLSTYPEFLKNNASE---TNKVVDYKDWQIMLSRRFRA 374

Query: 361 LKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVM 420
           LKLW V+R++GV  LR FIR HVGMAK FE LV  DKRFEV  PR FS+VCFR+ PSA++
Sbjct: 375 LKLWFVLRSYGVGQLREFIRGHVGMAKYFEGLVGLDKRFEVVAPRLFSMVCFRIKPSAMI 434

Query: 421 DKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGN 480
            K                ++E+  NE NR+LLES+N SG+++++H ++GGIYV+RFA G 
Sbjct: 435 GK----------------NDEDEVNEINRKLLESVNDSGRIYVSHTVLGGIYVIRFAIGG 478

Query: 481 SMTMESHVRAAWTVVQEHLEAF 502
           ++T  +HV AAW V+Q+H +A 
Sbjct: 479 TLTDINHVSAAWKVLQDHADAL 500

Petroselinum crispum (taxid: 4043)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 5

>sp|Q06087|TYDC3_PETCR Tyrosine decarboxylase 3 OS=Petroselinum crispum GN=TYRDC-3 PE=2 SV=1

 Score =  646 bits (1666), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 311/502 (61%), Positives = 390/502 (77%), Gaps = 19/502 (3%)

Query: 1   MDQAYAQEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETIL 60
           M+    +EFRRQGH+ +DF+A+YY+ ++ YPVRSQV PGYL++ LPESAPY+PES+ETIL
Sbjct: 19  MNTLEPEEFRRQGHLMIDFLADYYRKVENYPVRSQVSPGYLREILPESAPYNPESLETIL 78

Query: 61  QDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENI 120
           QDVQ  I+PGITHWQSPN+FAYFP++ S AG +GEMLS+GFNVVG +W+ SPAA ELEN+
Sbjct: 79  QDVQTKIIPGITHWQSPNFFAYFPSSGSTAGFLGEMLSTGFNVVGFNWMVSPAATELENV 138

Query: 121 VMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYS 180
           V DW G+ML LPKSFLFSG GGGV+QGTTCEA+LCTL AARD+ L++ G +NI KLVVY 
Sbjct: 139 VTDWFGKMLQLPKSFLFSGGGGGVLQGTTCEAILCTLVAARDKNLRQHGMDNIGKLVVYC 198

Query: 181 SDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCAT 240
           SDQTH A QKAA+I GID KN RAI+TTKSS++ L  + + S I  D++  LIPL+LCAT
Sbjct: 199 SDQTHSALQKAAKIAGIDPKNFRAIETTKSSNFKLCPKRLESAILYDLQNGLIPLYLCAT 258

Query: 241 VGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPH 300
           VGTT+ T VDPL  L +VAK++ +WVHVDAAYAGSACICPEFR ++DGVE  DSFS N H
Sbjct: 259 VGTTSSTTVDPLPALTEVAKKYDLWVHVDAAYAGSACICPEFRQYLDGVENADSFSLNAH 318

Query: 301 KWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRS 360
           KW  TTLDCCCLWV+DPS L+ +LST P++LKN A++     + V YKDWQI L RRFR+
Sbjct: 319 KWFLTTLDCCCLWVRDPSALIKSLSTYPEFLKNNASE---TNKVVDYKDWQIMLSRRFRA 375

Query: 361 LKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVM 420
           LKLW V+R++GV  LR FIR HVGMAK FE LV  DKRFEV  PR FS+VCFR+ PSA++
Sbjct: 376 LKLWFVLRSYGVGQLREFIRGHVGMAKYFEGLVGLDKRFEVVAPRLFSMVCFRIKPSAMI 435

Query: 421 DKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGN 480
            K                ++E   NE NR+LLES+N SG+++++H ++GGIYV+RFA G 
Sbjct: 436 GK----------------NDENEVNEINRKLLESVNDSGRIYVSHTVLGGIYVIRFAIGG 479

Query: 481 SMTMESHVRAAWTVVQEHLEAF 502
           ++T  +HV AAW V+Q+H +A 
Sbjct: 480 TLTDINHVSAAWKVLQDHADAL 501

Petroselinum crispum (taxid: 4043)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 5

>sp|Q06086|TYDC2_PETCR Tyrosine decarboxylase 2 OS=Petroselinum crispum GN=TYRDC-2 PE=2 SV=1

 Score =  645 bits (1664), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 311/502 (61%), Positives = 390/502 (77%), Gaps = 19/502 (3%)

Query: 1   MDQAYAQEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETIL 60
           M+    +EFRRQGHM +DF+A+YY+ ++ YPVRSQV PGYL++ LPESAPY+PES+ETIL
Sbjct: 17  MNTLEPEEFRRQGHMMIDFLADYYRKVENYPVRSQVSPGYLREILPESAPYNPESLETIL 76

Query: 61  QDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENI 120
           QDVQ  I+PGITHWQSPN+FAYFP++ S AG +GEMLS+GFNVVG +W+ SPAA ELEN+
Sbjct: 77  QDVQTKIIPGITHWQSPNFFAYFPSSGSTAGFLGEMLSTGFNVVGFNWMVSPAATELENV 136

Query: 121 VMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYS 180
           V DW G+ML LPKSFLFSG GGGV+QGTTCEA+LCTL AARD+ L++ G +NI KLVVY 
Sbjct: 137 VTDWFGKMLQLPKSFLFSGGGGGVLQGTTCEAILCTLVAARDKNLRQHGMDNIGKLVVYC 196

Query: 181 SDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCAT 240
           SDQTH A QKAA+I GID KN RAI+TTKSS++ L  + + S I  D++  LIPL+LCAT
Sbjct: 197 SDQTHSALQKAAKIAGIDPKNFRAIETTKSSNFQLCPKRLESAILHDLQNGLIPLYLCAT 256

Query: 241 VGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPH 300
           VGTT+ T VDPL  L +VAK++ +WVHVDAAYAGSACICPEFR ++DGVE  DSFS N H
Sbjct: 257 VGTTSSTTVDPLPALTEVAKKYDLWVHVDAAYAGSACICPEFRQYLDGVENADSFSLNAH 316

Query: 301 KWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRS 360
           KW  TTLDCCCLWV++PS L+ +LST P++LKN A++     + V YKDWQI L RRFR+
Sbjct: 317 KWFLTTLDCCCLWVRNPSALIKSLSTYPEFLKNNASE---TNKVVDYKDWQIMLSRRFRA 373

Query: 361 LKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVM 420
           LKLW V+R++GV  LR FIR HVGMAK FE LV  DKRFEV  PR FS+VCFR+ PSA++
Sbjct: 374 LKLWFVLRSYGVGQLREFIRGHVGMAKYFEGLVNMDKRFEVVAPRLFSMVCFRIKPSAMI 433

Query: 421 DKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGN 480
            K                ++E+  NE NR+LLES+N SG+++++H ++GGIYV+RFA G 
Sbjct: 434 GK----------------NDEDEVNEINRKLLESVNDSGRIYVSHTVLGGIYVIRFAIGG 477

Query: 481 SMTMESHVRAAWTVVQEHLEAF 502
           ++T  +HV AAW V+Q+H  A 
Sbjct: 478 TLTDINHVSAAWKVLQDHAGAL 499

Petroselinum crispum (taxid: 4043)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 5

>sp|Q06085|TYDC1_PETCR Tyrosine decarboxylase 1 (Fragment) OS=Petroselinum crispum GN=TYRDC-1 PE=2 SV=1

 Score =  588 bits (1515), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 287/451 (63%), Positives = 352/451 (78%), Gaps = 19/451 (4%)

Query: 8   EFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQEHI 67
           EFRRQGH+ +DF+A+YY+ ++ YPVRSQV PGYL++ LPESAPY+PES+ETILQDVQ  I
Sbjct: 1   EFRRQGHLMIDFLADYYRKVENYPVRSQVSPGYLREILPESAPYNPESLETILQDVQTKI 60

Query: 68  VPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQ 127
           +PGITHWQSPN+FAYFP++ S AG +GEMLS+GFNVVG +W+ SPAA ELEN+V DW G+
Sbjct: 61  IPGITHWQSPNFFAYFPSSGSTAGFLGEMLSTGFNVVGFNWMVSPAATELENVVTDWFGK 120

Query: 128 MLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA 187
           ML LPKSFLFSG GGGV+QGTTCEA+LCTL AARD+ L++ G +NI KLVVY SDQTH A
Sbjct: 121 MLQLPKSFLFSGGGGGVLQGTTCEAILCTLVAARDKNLRQHGMDNIGKLVVYCSDQTHSA 180

Query: 188 FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAIT 247
            QKAA+I GID KN RAI+T+KSS++ L  + + S I  D++  LIPL+LCATVGTT+ T
Sbjct: 181 LQKAAKIAGIDPKNFRAIETSKSSNFKLCPKRLESAILYDLQNGLIPLYLCATVGTTSST 240

Query: 248 AVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL 307
            VDPL  L +VAK++ +WVHVDAAYAGSACICPEFR ++DGVE  DSFS N HKW  TTL
Sbjct: 241 TVDPLPALTEVAKKYKLWVHVDAAYAGSACICPEFRQYLDGVENADSFSLNAHKWFLTTL 300

Query: 308 DCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVI 367
           DCCCLWV+DPS L+ +LST P++LKN A++     + V YKDWQI L RRFR+LKLW V+
Sbjct: 301 DCCCLWVRDPSALIKSLSTYPEFLKNNASET---NKVVDYKDWQIMLSRRFRALKLWFVL 357

Query: 368 RNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKY 427
           R++GV  LR FIR HVGMAK FE LV  D RFEV  PR FS+VCFR+ PSA++ K     
Sbjct: 358 RSYGVGQLREFIRGHVGMAKYFEGLVGMDNRFEVVAPRLFSMVCFRIKPSAMIGK----- 412

Query: 428 KNGTYDQYRQFSEEERTNEFNRELLESINVS 458
                      ++E+  NE NR+LLES+N S
Sbjct: 413 -----------NDEDEVNEINRKLLESVNDS 432

Petroselinum crispum (taxid: 4043)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 5

>sp|P17770|DDC_CATRO Aromatic-L-amino-acid decarboxylase OS=Catharanthus roseus GN=TDC PE=2 SV=1

 Score =  579 bits (1493), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 269/492 (54%), Positives = 356/492 (72%), Gaps = 24/492 (4%)

Query: 6   AQEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQE 65
           A+EFR+Q H  VDF+A+YYKN++ YPV S+VEPGYL+KR+PE+APY PE ++ I++D+Q+
Sbjct: 24  AEEFRKQAHRMVDFIADYYKNVETYPVLSEVEPGYLRKRIPETAPYLPEPLDDIMKDIQK 83

Query: 66  HIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWL 125
            I+PG+T+W SPN++A+FPAT S A  +GEMLS+  N VG  W+SSPAA ELE IVMDWL
Sbjct: 84  DIIPGMTNWMSPNFYAFFPATVSSAAFLGEMLSTALNSVGFTWVSSPAATELEMIVMDWL 143

Query: 126 GQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTH 185
            Q+L LPKSF+FSG GGGVIQ TT E++LCT+ AAR+R L+K+G ++I KLV Y SDQTH
Sbjct: 144 AQILKLPKSFMFSGTGGGVIQNTTSESILCTIIAARERALEKLGPDSIGKLVCYGSDQTH 203

Query: 186 CAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTA 245
             F K  ++ GI   NIR I TT  + +G+S + +   +  DV A  +PLFLCAT+GTT+
Sbjct: 204 TMFPKTCKLAGIYPNNIRLIPTTVETDFGISPQVLRKMVEDDVAAGYVPLFLCATLGTTS 263

Query: 246 ITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFT 305
            TA DP+  L ++A +FGIW+HVDAAYAGSACICPEFRH++DG+E VDS S +PHKWL  
Sbjct: 264 TTATDPVDSLSEIANEFGIWIHVDAAYAGSACICPEFRHYLDGIERVDSLSLSPHKWLLA 323

Query: 306 TLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWV 365
            LDC CLWVK P  LL  L+TNP+YLKN+ +D    ++ V +K+WQI   R+FRSLKLW+
Sbjct: 324 YLDCTCLWVKQPHLLLRALTTNPEYLKNKQSDL---DKVVDFKNWQIATGRKFRSLKLWL 380

Query: 366 VIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRT 425
           ++R++GV NL++ IRS V M K+FE  V SD RFE+  PRNFSLVCFR+ P         
Sbjct: 381 ILRSYGVVNLQSHIRSDVAMGKMFEEWVRSDSRFEIVVPRNFSLVCFRLKPDV------- 433

Query: 426 KYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTME 485
                               E N++LL+ +N +G+V+MTH IVGGIY+LR A G+S+T E
Sbjct: 434 --------------SSLHVEEVNKKLLDMLNSTGRVYMTHTIVGGIYMLRLAVGSSLTEE 479

Query: 486 SHVRAAWTVVQE 497
            HVR  W ++Q+
Sbjct: 480 HHVRRVWDLIQK 491

Catharanthus roseus (taxid: 4058)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

>sp|Q9M0G4|TYDC2_ARATH Probable tyrosine decarboxylase 2 OS=Arabidopsis thaliana GN=At4g28680 PE=2 SV=1

 Score =  564 bits (1454), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 267/501 (53%), Positives = 352/501 (70%), Gaps = 27/501 (5%)

Query: 6   AQEFRRQGHMFVDFMAEYYKNIDK----YPVRSQVEPGYLKKRLPESAPYSPESVETILQ 61
           ++  R QGH+ VDF+A+YYKN+      +PV SQV+PGYL+  LP+SAP  PES++ +L 
Sbjct: 62  SELLREQGHIMVDFIADYYKNLQDSPQDFPVLSQVQPGYLRDMLPDSAPERPESLKELLD 121

Query: 62  DVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIV 121
           DV + I+PGITHWQSP+YFAY+ +++SVAG +GEML++G +VVG  W++SPAA ELE IV
Sbjct: 122 DVSKKIMPGITHWQSPSYFAYYASSTSVAGFLGEMLNAGLSVVGFTWLTSPAATELEIIV 181

Query: 122 MDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSS 181
           +DWL ++L LP  FL +GNGGGVIQGT CEA+L  + AARDR+LKK+G+  + +LVVY S
Sbjct: 182 LDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGS 241

Query: 182 DQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATV 241
           DQTH +F+KA  I GI  +NIR +KT  S++YG+  ES+   I+ D+    IP F+CATV
Sbjct: 242 DQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATV 301

Query: 242 GTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHK 301
           GTT+  AVDPL PL ++AK++GIW+HVDAAYAG+ACICPE+R FIDG+E  DSF+ N HK
Sbjct: 302 GTTSSAAVDPLVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHK 361

Query: 302 WLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSL 361
           WLF    C  LWVKD   L+  L TNP+YL+ + +    K+  V YKDWQI+L RRFRSL
Sbjct: 362 WLFANQTCSPLWVKDRYSLIDALKTNPEYLEFKVSK---KDTVVNYKDWQISLSRRFRSL 418

Query: 362 KLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMD 421
           KLW+V+R +G  NLRNFIR HV +AK FE  V  D  FEV   R FSLVCFR+ P     
Sbjct: 419 KLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYFSLVCFRLAPVD--- 475

Query: 422 KLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNS 481
                             +E++ NE NRELL ++N +GK+F++H  + G +VLRFA G  
Sbjct: 476 -----------------GDEDQCNERNRELLAAVNSTGKIFISHTALSGKFVLRFAVGAP 518

Query: 482 MTMESHVRAAWTVVQEHLEAF 502
           +T E HV  AW ++Q+H   F
Sbjct: 519 LTEEKHVTEAWQIIQKHASKF 539

Arabidopsis thaliana (taxid: 3702)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	502
260060489	517	tyrosine decarboxylase [Citrus reshni] g	0.972	0.943	0.783	0.0
260060487	517	tyrosine decarboxylase [Citrus reshni]	0.972	0.943	0.775	0.0
12620328	518	tyrosine/dopa decarboxylase [Thalictrum	0.974	0.944	0.683	0.0
217038851	537	tyrosine/DOPA decarboxylase [Argemone me	0.978	0.914	0.656	0.0
3282527	525	tyrosine/dopa decarboxylase [Papaver som	0.960	0.918	0.665	0.0
3282523	512	tyrosine/dopa decarboxylase [Papaver som	0.960	0.941	0.661	0.0
115607203	516	tyrosine decarboxylase [Aristolochia con	0.958	0.932	0.651	0.0
1717826	531	RecName: Full=Tyrosine/DOPA decarboxylas	0.978	0.924	0.647	0.0
22261822	533	RecName: Full=Tyrosine/DOPA decarboxylas	0.978	0.921	0.645	0.0
3282525	531	tyrosine/dopa decarboxylase [Papaver som	0.978	0.924	0.643	0.0

>gi|260060489|gb|ACX29991.1| tyrosine decarboxylase [Citrus reshni] gi|260060491|gb|ACX29992.1| tyrosine decarboxylase [Citrus sinensis] gi|260060497|gb|ACX29995.1| tyrosine decarboxylase [Citrus aurantium] gi|260060499|gb|ACX29996.1| tyrosine decarboxylase [Citrus reticulata]

 Score =  830 bits (2144), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/498 (78%), Positives = 438/498 (87%), Gaps = 10/498 (2%)

Query: 6   AQEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQE 65
           ++EFRRQGHM +DF+A+YYKN++KYPVRSQVEPGYL+K LPESAP +PES+ETILQDVQ+
Sbjct: 23  SEEFRRQGHMIIDFIADYYKNVEKYPVRSQVEPGYLQKVLPESAPNNPESMETILQDVQQ 82

Query: 66  HIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWL 125
           HIVPGITHWQSPNYFAYFP++ S+AG +GEMLSSGFN+VG +WISSPAA ELENIVMDWL
Sbjct: 83  HIVPGITHWQSPNYFAYFPSSGSIAGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWL 142

Query: 126 GQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTH 185
           GQML LPKSFLFSGNGGGVIQGTTCEA+LCTLTAARDRVL KIGRENISKL+VY SDQTH
Sbjct: 143 GQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTH 202

Query: 186 CAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTA 245
           CA QKAAQIVGID KN RAIKTTKSSSYGLS +S+++QIN DVE  LIPLFLCAT+GTTA
Sbjct: 203 CALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTA 262

Query: 246 ITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFT 305
           ITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE  DSFS N HKW F 
Sbjct: 263 ITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFA 322

Query: 306 TLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWV 365
           TLDCCCLWVKDP  L+S+LSTNP+YLKN+AT+     Q V YKDWQITL RRFRSLKLW 
Sbjct: 323 TLDCCCLWVKDPRALVSSLSTNPEYLKNKATES---MQVVDYKDWQITLSRRFRSLKLWF 379

Query: 366 VIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAV-MDKLR 424
           VIRN+GVANLR+F+RSHV MAKLFERLV+ DKRFE+ FP +F++VCFRV+PS V MDKL+
Sbjct: 380 VIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPVLMDKLK 439

Query: 425 TKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTM 484
           TKY N         SEEE+ NEFNRELLESIN SGK +MTHA++GGIY +RFA G ++T 
Sbjct: 440 TKYVNCL------LSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTE 493

Query: 485 ESHVRAAWTVVQEHLEAF 502
           + HV  AWTVVQ+HLEAF
Sbjct: 494 KRHVVVAWTVVQQHLEAF 511

Source: Citrus reshni

Species: Citrus reshni

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|260060487|gb|ACX29990.1| tyrosine decarboxylase [Citrus reshni]

 Score =  821 bits (2121), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/498 (77%), Positives = 435/498 (87%), Gaps = 10/498 (2%)

Query: 6   AQEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQE 65
           ++EFRRQGHM +DF+A+YYKN++KYPVRSQVEPGYL++ LPESAP +PES+ETILQDVQ+
Sbjct: 23  SEEFRRQGHMIIDFIADYYKNVEKYPVRSQVEPGYLQRVLPESAPNNPESMETILQDVQQ 82

Query: 66  HIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWL 125
           HIVPGITHWQSPNYFAYFP++ S+AG +GEMLSSGFN+VG +WISSPAA ELENIVMDWL
Sbjct: 83  HIVPGITHWQSPNYFAYFPSSGSIAGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWL 142

Query: 126 GQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTH 185
           GQML LPKSFLFSGNGGGVIQGTTCEA+LCTLTAARDRVL KIGRENISKL+VY SDQTH
Sbjct: 143 GQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTH 202

Query: 186 CAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTA 245
           CA QKAAQIVGID KN RAIKTTKSSSYGLS +S+++QIN DVE  LIPLFLCAT+GTTA
Sbjct: 203 CALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTA 262

Query: 246 ITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFT 305
           ITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE  DSFS N HKW F 
Sbjct: 263 ITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFA 322

Query: 306 TLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWV 365
           TLDCCCLWVKDP  L+S+LSTNP+YLKN+AT+       V YKDWQITL RR RSLKLW 
Sbjct: 323 TLDCCCLWVKDPRALVSSLSTNPEYLKNKATE---SMHVVDYKDWQITLSRRSRSLKLWF 379

Query: 366 VIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAV-MDKLR 424
           VIRN+GVANLR+F+RSHV MAKLFERLV+ DKRFE+ FP +F++VCFRV+PS V MDKL+
Sbjct: 380 VIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPVLMDKLK 439

Query: 425 TKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTM 484
           TKY N         SE E+ NEFNRELLESIN SGK +MTHA++GGIY +RFA G ++T 
Sbjct: 440 TKYVNCL------LSEGEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTE 493

Query: 485 ESHVRAAWTVVQEHLEAF 502
           + HV  AWTVVQ+HLEAF
Sbjct: 494 KQHVVVAWTVVQQHLEAF 511

Source: Citrus reshni

Species: Citrus reshni

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|12620328|gb|AAG60665.1|AF314150_1 tyrosine/dopa decarboxylase [Thalictrum flavum subsp. glaucum]

 Score =  736 bits (1901), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 339/496 (68%), Positives = 407/496 (82%), Gaps = 7/496 (1%)

Query: 7   QEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQEH 66
           +EFRRQGHM +DF+A+YY++I+KYPVRSQVEPGYL+K +P+SAPY+PES+ETIL+DV + 
Sbjct: 24  EEFRRQGHMMIDFLADYYRDIEKYPVRSQVEPGYLRKEIPDSAPYNPESIETILEDVHKQ 83

Query: 67  IVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLG 126
           I+PGITHWQSPNYFAYFP++ SVAG +GEMLS+GFNVVG +W+SSPAA ELE+IVMDWLG
Sbjct: 84  IIPGITHWQSPNYFAYFPSSGSVAGFLGEMLSTGFNVVGFNWMSSPAATELESIVMDWLG 143

Query: 127 QMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHC 186
           +ML LPKSFLFSGNGGGV+QGTTCEA+LCTLTAARDR+L KIGRENI KLVVY SDQTHC
Sbjct: 144 KMLKLPKSFLFSGNGGGVLQGTTCEAILCTLTAARDRMLNKIGRENICKLVVYGSDQTHC 203

Query: 187 AFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAI 246
           A QKAAQI GI   N RA+ TTK++ YGLSA ++ S I  D+EA L+PLFLCATVGTT+ 
Sbjct: 204 ALQKAAQIAGIHPNNFRAVPTTKANDYGLSASALRSTILEDIEAGLVPLFLCATVGTTSS 263

Query: 247 TAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT 306
           TAVDP+ PLC VA  + IWVHVDAAYAGSACICPEFRHFIDGVE  DSFS N HKW FTT
Sbjct: 264 TAVDPIGPLCKVASDYSIWVHVDAAYAGSACICPEFRHFIDGVENADSFSLNAHKWFFTT 323

Query: 307 LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVV 366
           LDCCCLWVK+PS L+  LSTNP+YL+N+AT+     Q V YKDWQI L RRFR++KLW+V
Sbjct: 324 LDCCCLWVKEPSALIKALSTNPEYLRNKATES---HQVVDYKDWQIALSRRFRAMKLWLV 380

Query: 367 IRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTK 426
           +R++GVANLRNF+RSHV MAK FE  +  DKRFE+  PR F++VCFR+ P      ++T 
Sbjct: 381 LRSYGVANLRNFLRSHVKMAKNFEGFIALDKRFEIVVPRTFAMVCFRLLPPRSPLIIKTN 440

Query: 427 -YKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTME 485
            Y+NG    ++   +E R NE NR LLESIN SG  +MTH++VGG+Y++RFA G S+T E
Sbjct: 441 GYQNGNGVYHK---DESRANELNRRLLESINASGSAYMTHSMVGGVYMIRFAVGASLTEE 497

Query: 486 SHVRAAWTVVQEHLEA 501
            HV  AW VVQEH +A
Sbjct: 498 RHVILAWKVVQEHADA 513

Source: Thalictrum flavum subsp. glaucum

Species: Thalictrum flavum

Genus: Thalictrum

Family: Ranunculaceae

Order: Ranunculales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217038851|gb|ACJ76782.1| tyrosine/DOPA decarboxylase [Argemone mexicana]

 Score =  729 bits (1883), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/503 (65%), Positives = 412/503 (81%), Gaps = 12/503 (2%)

Query: 7   QEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQEH 66
           +EFR+QGHM +DF+A+YY++I+KYPVRSQVEPGYL+KRLPE+APY+PES+E+IL+DVQ  
Sbjct: 25  EEFRKQGHMIIDFLADYYRDIEKYPVRSQVEPGYLRKRLPETAPYNPESMESILEDVQNE 84

Query: 67  IVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLG 126
           I+PGITHWQSPNYFAYFP++ S+AG +GEMLS+GFNVVG +W+SSPAA ELE+IVMDWLG
Sbjct: 85  IIPGITHWQSPNYFAYFPSSGSIAGFLGEMLSTGFNVVGFNWMSSPAATELESIVMDWLG 144

Query: 127 QMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHC 186
           +ML LPKSFLFSGNGGGV+QGTTCEA+LCTLTAARDR+L KIGRENI +LVVY SDQTHC
Sbjct: 145 KMLKLPKSFLFSGNGGGVLQGTTCEAILCTLTAARDRMLNKIGRENIGRLVVYGSDQTHC 204

Query: 187 AFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAI 246
           A QKAAQI GI+ KN RA++T K+ S+GLSA+++   I  DVEA LIPLF+C TVGTT+ 
Sbjct: 205 ALQKAAQIAGINPKNFRAVQTFKAHSFGLSADTLRKVIRSDVEAGLIPLFVCPTVGTTSS 264

Query: 247 TAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT 306
           TAVDP+ P+C+VAK++ +WVHVDAAYAGSACICPEFRHFIDGVE  DSFS N HKW FTT
Sbjct: 265 TAVDPIGPICEVAKEYEMWVHVDAAYAGSACICPEFRHFIDGVENADSFSLNAHKWFFTT 324

Query: 307 LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVV 366
           LDCCCLWVKDPS L+  LSTNP+YL+N+AT+    +Q V YKDWQI L RRFRS+KLW+V
Sbjct: 325 LDCCCLWVKDPSALVKALSTNPEYLRNKATES---KQVVDYKDWQIALSRRFRSMKLWMV 381

Query: 367 IRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTK 426
           +RN+GVANLRNF+RSHV MAK FE L+ SD RFE+  PR F++VCFR+ P       R +
Sbjct: 382 LRNYGVANLRNFLRSHVKMAKQFEGLIASDNRFEICVPRTFAMVCFRLLPPKSTRDNRVR 441

Query: 427 -----YKNGTYDQYRQFSEEER----TNEFNRELLESINVSGKVFMTHAIVGGIYVLRFA 477
                + +G +D     +E++      N+ N+  LE +N +G ++MTHA+VGGIY++RFA
Sbjct: 442 EEDGLFVSGVHDHENNINEDDHLLVVANKLNQIYLEKVNATGSLYMTHAVVGGIYMIRFA 501

Query: 478 AGNSMTMESHVRAAWTVVQEHLE 500
            G+++T E H+  AW V+QEH +
Sbjct: 502 VGSTLTEERHITHAWKVLQEHAD 524

Source: Argemone mexicana

Species: Argemone mexicana

Genus: Argemone

Family: Papaveraceae

Order: Ranunculales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|3282527|gb|AAC61844.1| tyrosine/dopa decarboxylase [Papaver somniferum]

 Score =  713 bits (1841), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/499 (66%), Positives = 406/499 (81%), Gaps = 17/499 (3%)

Query: 8   EFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQEHI 67
           EFRRQGHM +DF+A+YYKN++KYPVRSQVEPGYLKKRLPESAPY+PES+ETIL+DV   I
Sbjct: 24  EFRRQGHMIIDFLADYYKNVEKYPVRSQVEPGYLKKRLPESAPYNPESIETILEDVTNDI 83

Query: 68  VPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQ 127
           +PG+THWQSPNYFAYFP++ S+AG +GEMLS+GFNVVG +W+SSPAA ELE+IVM+WLGQ
Sbjct: 84  IPGLTHWQSPNYFAYFPSSGSIAGFLGEMLSTGFNVVGFNWMSSPAATELESIVMNWLGQ 143

Query: 128 MLDLPKSFLFSGNGGG----VIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQ 183
           ML LPKSFLFS +G      V+QGTTCEA+LCTLTAARD++L KIGRENI+KLVVY+SDQ
Sbjct: 144 MLTLPKSFLFSSDGSSGGGGVLQGTTCEAILCTLTAARDKMLNKIGRENINKLVVYASDQ 203

Query: 184 THCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGT 243
           THCA QKAAQI GI+ KN RAI T+K++++GLS  S+ S I  D+E+ L+PLFLCATVGT
Sbjct: 204 THCALQKAAQIAGINPKNFRAIATSKATNFGLSPNSLQSTILADIESGLVPLFLCATVGT 263

Query: 244 TAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWL 303
           T+ TAVDP+ PLC VAK  GIWVH+DAAYAGSACICPEFRHFIDGVE  DSFS N HKW 
Sbjct: 264 TSSTAVDPIGPLCAVAKLHGIWVHIDAAYAGSACICPEFRHFIDGVEDADSFSLNAHKWF 323

Query: 304 FTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKL 363
           FTTLDCCCLWVKD   L+  LST+P+YLKN+ATD    +Q + YKDWQI L RRFRS+KL
Sbjct: 324 FTTLDCCCLWVKDSDSLVKALSTSPEYLKNKATDS---KQVIDYKDWQIALSRRFRSMKL 380

Query: 364 WVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKL 423
           W+V+R++G+ANLR F+RSHV MAK F+ L+  D RFE+  PR F++VCFR+ P+A+  K 
Sbjct: 381 WLVLRSYGIANLRTFLRSHVKMAKHFQGLIGMDNRFEIVVPRTFAMVCFRLKPAAIFRKK 440

Query: 424 RTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMT 483
             +      D +     E +TNE N +LLES+N SGK++MTHA+VGG+Y++RFA G ++T
Sbjct: 441 IVE------DDHI----EAQTNEVNAKLLESVNASGKIYMTHAVVGGVYMIRFAVGATLT 490

Query: 484 MESHVRAAWTVVQEHLEAF 502
            E HV  AW VVQEH +A 
Sbjct: 491 EERHVTGAWKVVQEHTDAI 509

Source: Papaver somniferum

Species: Papaver somniferum

Genus: Papaver

Family: Papaveraceae

Order: Ranunculales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|3282523|gb|AAC61842.1| tyrosine/dopa decarboxylase [Papaver somniferum]

 Score =  712 bits (1837), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/499 (66%), Positives = 408/499 (81%), Gaps = 17/499 (3%)

Query: 8   EFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQEHI 67
           EFRRQGHM +DF+A+YYKN++ YPVRSQVEPGYLKKRLPESAPY+PES+ETIL+DV   I
Sbjct: 24  EFRRQGHMIIDFLADYYKNVENYPVRSQVEPGYLKKRLPESAPYNPESIETILEDVTNDI 83

Query: 68  VPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQ 127
           +PG+THWQSPNYFAYFP++ S+AG +GEMLS+GFNVVG +W+SSPAA ELE+IVM+WLGQ
Sbjct: 84  IPGLTHWQSPNYFAYFPSSGSIAGFLGEMLSTGFNVVGFNWMSSPAATELESIVMNWLGQ 143

Query: 128 MLDLPKSFLFSGNGGG----VIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQ 183
           ML LPKSFLFS +G      V+QGTTCEA+LCTLTAARD++L KIGRENI+KLVVY+S+Q
Sbjct: 144 MLTLPKSFLFSSDGSSGGGGVLQGTTCEAILCTLTAARDKMLNKIGRENINKLVVYASNQ 203

Query: 184 THCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGT 243
           THCA QKAAQI GI+ KN+RAIKT+K++++GLS  S+ S I  D+E+ L+PLFLCATVGT
Sbjct: 204 THCALQKAAQIAGINPKNVRAIKTSKATNFGLSPNSLQSAILADIESGLVPLFLCATVGT 263

Query: 244 TAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWL 303
           T+ TAVDP+ PLC VAK +GIWVH+DAAYAGSACICPEFRHFIDGVE  DSFS N HKW 
Sbjct: 264 TSSTAVDPIGPLCAVAKLYGIWVHIDAAYAGSACICPEFRHFIDGVEDADSFSLNAHKWF 323

Query: 304 FTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKL 363
           FTTLDCCCLWVKD   L+  LST+ +YLKN+AT+    +Q + YKDWQI L RRFRS+KL
Sbjct: 324 FTTLDCCCLWVKDSDSLVKALSTSAEYLKNKATES---KQVIDYKDWQIALSRRFRSMKL 380

Query: 364 WVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKL 423
           W+V+R++GVANLR F+RSHV MAK F+ L+  D RFE+  PR F++VCFR+ P+A+    
Sbjct: 381 WLVLRSYGVANLRTFLRSHVKMAKHFQGLMGMDNRFEIVVPRTFAMVCFRLKPAAI---F 437

Query: 424 RTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMT 483
           + K  +  Y        E++TNE N +LLES+N SGK++MTHA+VGG+Y++RFA G ++T
Sbjct: 438 KQKIVDNDYI-------EDQTNEVNAKLLESVNASGKIYMTHAVVGGVYMIRFAVGATLT 490

Query: 484 MESHVRAAWTVVQEHLEAF 502
            E HV  AW VVQEH +A 
Sbjct: 491 EERHVTGAWKVVQEHTDAI 509

Source: Papaver somniferum

Species: Papaver somniferum

Genus: Papaver

Family: Papaveraceae

Order: Ranunculales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115607203|gb|ABJ16446.1| tyrosine decarboxylase [Aristolochia contorta]

 Score =  711 bits (1835), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/496 (65%), Positives = 398/496 (80%), Gaps = 15/496 (3%)

Query: 7   QEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQEH 66
           +EFRRQGHM +DF+A+YY++++KYPVRSQVEPGYL+KRLPESAPY+PE +E+I+QDVQ H
Sbjct: 24  EEFRRQGHMMIDFLADYYRDVEKYPVRSQVEPGYLRKRLPESAPYNPEPIESIIQDVQSH 83

Query: 67  IVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLG 126
           IVPGITHWQSPNYFAYFP++ S AG +GEMLS+GFNVVG +W+SSPAA ELE+IVMDWLG
Sbjct: 84  IVPGITHWQSPNYFAYFPSSGSTAGFLGEMLSTGFNVVGFNWMSSPAATELESIVMDWLG 143

Query: 127 QMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHC 186
           +ML LPKSFLFSG+ GGV+QGTTCEA+LCTLTAARDR L +IGR  I +LVVY SDQTHC
Sbjct: 144 KMLRLPKSFLFSGSEGGVLQGTTCEAILCTLTAARDRALCEIGRGEIGRLVVYGSDQTHC 203

Query: 187 AFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAI 246
           A QKAAQI GID  N RA+KT +S ++G+SA ++ + +  D    L+PLF+CATVGTT+ 
Sbjct: 204 ALQKAAQIAGIDPANFRAVKTARSDNFGMSAAALRAAVEEDTARGLVPLFVCATVGTTSS 263

Query: 247 TAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT 306
           TAVDPL PLC+VA++ G+WVHVDAAYAGSACICPEFRHFIDGVE  DSFS N HKWLFT 
Sbjct: 264 TAVDPLGPLCEVAREHGMWVHVDAAYAGSACICPEFRHFIDGVEEADSFSLNAHKWLFTI 323

Query: 307 LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVV 366
           LDCCCLWVKDP  L+  LSTNP+YL+N+AT+     Q V YKDWQI L RRFR+LKLW+V
Sbjct: 324 LDCCCLWVKDPGSLVKALSTNPEYLRNKATES---RQVVDYKDWQIALSRRFRALKLWLV 380

Query: 367 IRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTK 426
           +R++GV+NLRNF+R+HV MAK FE L+  DKRFEV  PR F++VCFR+ P+        +
Sbjct: 381 LRSYGVSNLRNFLRTHVKMAKTFEGLLAMDKRFEVVVPRTFAMVCFRLLPAGGGGGGDDE 440

Query: 427 YKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMES 486
                          +  NE NR+LLESIN SG+++MTH++VGG+Y++RFA G S+T + 
Sbjct: 441 ------------EGLDAVNELNRKLLESINASGRIYMTHSVVGGVYMIRFAVGASLTEDR 488

Query: 487 HVRAAWTVVQEHLEAF 502
           HV  AW VVQ+H +A 
Sbjct: 489 HVNLAWKVVQDHADAL 504

Source: Aristolochia contorta

Species: Aristolochia contorta

Genus: Aristolochia

Family: Aristolochiaceae

Order: Piperales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|1717826|sp|P54769.1|TYDC2_PAPSO RecName: Full=Tyrosine/DOPA decarboxylase 2; Includes: RecName: Full=DOPA decarboxylase; Short=DDC; Includes: RecName: Full=Tyrosine decarboxylase gi|607747|gb|AAA62347.1| tyrosine/dopa decarboxylase [Papaver somniferum]

 Score =  709 bits (1831), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 322/497 (64%), Positives = 402/497 (80%), Gaps = 6/497 (1%)

Query: 7   QEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQEH 66
           +EFRRQGHM +DF+A+YY++++KYPVRSQVEPGYL+KRLPE+APY+PES+ETILQDV   
Sbjct: 25  EEFRRQGHMIIDFLADYYRDVEKYPVRSQVEPGYLRKRLPETAPYNPESIETILQDVTTE 84

Query: 67  IVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLG 126
           I+PG+THWQSPNY+AYFP++ SVAG +GEMLS+GFNVVG +W+SSPAA ELE++VMDW G
Sbjct: 85  IIPGLTHWQSPNYYAYFPSSGSVAGFLGEMLSTGFNVVGFNWMSSPAATELESVVMDWFG 144

Query: 127 QMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHC 186
           +ML+LP+SFLFSG+GGGV+QGT+CEA+LCTLTAARDR L KIGRE+I +LVVY SDQTHC
Sbjct: 145 KMLNLPESFLFSGSGGGVLQGTSCEAILCTLTAARDRKLNKIGREHIGRLVVYGSDQTHC 204

Query: 187 AFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAI 246
           A QKAAQ+ GI+ KN RAIKT K +S+GLSA ++   I  D+EA LIPLF+C TVGTT+ 
Sbjct: 205 ALQKAAQVAGINPKNFRAIKTFKENSFGLSAATLREVILEDIEAGLIPLFVCPTVGTTSS 264

Query: 247 TAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT 306
           TAVDP+ P+C+VAK++ +WVHVDAAYAGSACICPEFRHFIDGVE  DSFS N HKW FTT
Sbjct: 265 TAVDPISPICEVAKEYEMWVHVDAAYAGSACICPEFRHFIDGVEEADSFSLNAHKWFFTT 324

Query: 307 LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVV 366
           LDCCCLWVKDPS L+  LSTNP+YL+N+AT+     Q V YKDWQI L RRFRSLKLW+V
Sbjct: 325 LDCCCLWVKDPSALVKALSTNPEYLRNKATES---RQVVDYKDWQIALSRRFRSLKLWMV 381

Query: 367 IRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPS---AVMDKL 423
           +R++GV NLRNF+RSHV MAK FE L+  D RFE+  PR F++VCFR+ P     V D  
Sbjct: 382 LRSYGVTNLRNFLRSHVKMAKTFEGLICMDGRFEITVPRTFAMVCFRLLPPKTIKVYDNG 441

Query: 424 RTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMT 483
             +  NG      +       N+ N+  LE++N +G V+MTHA+VGG+Y++RFA G+++T
Sbjct: 442 VHQNGNGVVPLRDENENLVLANKLNQVYLETVNATGSVYMTHAVVGGVYMIRFAVGSTLT 501

Query: 484 MESHVRAAWTVVQEHLE 500
            E HV  AW ++QEH +
Sbjct: 502 EERHVIYAWKILQEHAD 518

Source: Papaver somniferum

Species: Papaver somniferum

Genus: Papaver

Family: Papaveraceae

Order: Ranunculales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|22261822|sp|P54770.2|TYDC3_PAPSO RecName: Full=Tyrosine/DOPA decarboxylase 3; Includes: RecName: Full=DOPA decarboxylase; Short=DDC; Includes: RecName: Full=Tyrosine decarboxylase gi|3282519|gb|AAC61840.1| tyrosine/dopa decarboxylase [Papaver somniferum]

 Score =  707 bits (1825), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 322/499 (64%), Positives = 403/499 (80%), Gaps = 8/499 (1%)

Query: 7   QEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQEH 66
           +EFRRQGHM +DF+A+YY++++KYPVRSQVEPGYL+KRLPE+APY+PES+ETILQDV   
Sbjct: 25  EEFRRQGHMIIDFLADYYRDVEKYPVRSQVEPGYLRKRLPETAPYNPESIETILQDVTSE 84

Query: 67  IVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLG 126
           I+PG+THWQSPNY+AYFP++ SVAG +GEMLS+GFNVVG +W+SSPAA ELE IVMDW G
Sbjct: 85  IIPGLTHWQSPNYYAYFPSSGSVAGFLGEMLSTGFNVVGFNWMSSPAATELEGIVMDWFG 144

Query: 127 QMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHC 186
           +ML+LPKS+LFSG GGGV+QGTTCEA+LCTLTAARDR L KIGRE+I +LVVY SDQTHC
Sbjct: 145 KMLNLPKSYLFSGTGGGVLQGTTCEAILCTLTAARDRKLNKIGREHIGRLVVYGSDQTHC 204

Query: 187 AFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAI 246
           A QKAAQI GI+ KN RA+KT K++S+GL+A ++   I  D+EA LIPLF+C TVGTT+ 
Sbjct: 205 ALQKAAQIAGINPKNFRAVKTFKANSFGLAASTLREVILEDIEAGLIPLFVCPTVGTTSS 264

Query: 247 TAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT 306
           TAVDP+ P+C+VAK++ +WVH+DAAYAGSACICPEFRHFIDGVE  DSFS N HKW FTT
Sbjct: 265 TAVDPIGPICEVAKEYEMWVHIDAAYAGSACICPEFRHFIDGVEEADSFSLNAHKWFFTT 324

Query: 307 LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVV 366
           LDCCCLWVKDPS L+  LSTNP+YL+N+AT+     Q V YKDWQI L RRFRS+KLW+V
Sbjct: 325 LDCCCLWVKDPSSLVKALSTNPEYLRNKATES---RQVVDYKDWQIALIRRFRSMKLWMV 381

Query: 367 IRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVM----DK 422
           +R++GV NLRNF+RSHV MAK FE LV +D+RFE+  PR F++VCFR+ P   +    + 
Sbjct: 382 LRSYGVTNLRNFLRSHVRMAKTFEGLVGADRRFEITVPRTFAMVCFRLLPPTTVKVCGEN 441

Query: 423 LRTKYKNGTYDQYRQFSEE-ERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNS 481
              +  NG     R  +EE    N+ N+  L  +  +G V+MTHA+VGG+Y++RFA G++
Sbjct: 442 GVHQNGNGVIAVLRNENEELVLANKLNQVYLRQVKATGSVYMTHAVVGGVYMIRFAVGST 501

Query: 482 MTMESHVRAAWTVVQEHLE 500
           +T E HV  AW V+QEH +
Sbjct: 502 LTEERHVIHAWEVLQEHAD 520

Source: Papaver somniferum

Species: Papaver somniferum

Genus: Papaver

Family: Papaveraceae

Order: Ranunculales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|3282525|gb|AAC61843.1| tyrosine/dopa decarboxylase [Papaver somniferum]

 Score =  707 bits (1824), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 320/497 (64%), Positives = 402/497 (80%), Gaps = 6/497 (1%)

Query: 7   QEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQEH 66
           +EFRRQGHM +DF+A+YY++++KYPVRSQVEPGYL+KRLPE+APY+PES+ETILQDV   
Sbjct: 25  EEFRRQGHMIIDFLADYYRDVEKYPVRSQVEPGYLRKRLPETAPYNPESIETILQDVTTE 84

Query: 67  IVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLG 126
           I+PG+THWQSPNY+AYFP++ SVAG +GEMLS+GFNVVG +W+SSPAA ELE+IVMDW G
Sbjct: 85  IIPGLTHWQSPNYYAYFPSSGSVAGFLGEMLSTGFNVVGFNWMSSPAATELESIVMDWFG 144

Query: 127 QMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHC 186
           +ML+LP+SFLFSG GGGV+QGT+CEA+LCTLTAARDR L KIGRE+I +LVVY SDQTHC
Sbjct: 145 KMLNLPESFLFSGTGGGVLQGTSCEAILCTLTAARDRKLNKIGREHIGRLVVYGSDQTHC 204

Query: 187 AFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAI 246
           A QKAAQ+ GI+ KN RA+KT K++S+GL+A ++   I  D+EA LIPLF+C TVGTT+ 
Sbjct: 205 ALQKAAQVAGINPKNYRAVKTFKANSFGLAAATLKEVILEDIEAGLIPLFVCPTVGTTSS 264

Query: 247 TAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT 306
           TAVDP+ P+C+VAK++ +WVHVDAAYAGSACICPEFRHFIDGVE  DSFS N HKW FTT
Sbjct: 265 TAVDPIGPICEVAKEYEMWVHVDAAYAGSACICPEFRHFIDGVEEADSFSLNAHKWFFTT 324

Query: 307 LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVV 366
           LDCCCLWVKD S L+  LSTNP+YL+N+AT+     Q V YKDWQI L RRFRSLKLW+V
Sbjct: 325 LDCCCLWVKDSSALVKALSTNPEYLRNKATES---RQVVDYKDWQIALSRRFRSLKLWMV 381

Query: 367 IRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSA---VMDKL 423
           +R++G+ NLRNF+RSHV MAK FE L+  D RFE+  PR F++VCFR+ P     V D  
Sbjct: 382 LRSYGITNLRNFLRSHVKMAKTFEGLIGMDGRFEITVPRTFAMVCFRLLPPTTIKVYDNG 441

Query: 424 RTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMT 483
             +  NG    + +       N+ N+  LE++N +G V+MTHA+VGG+Y++RFA G+++T
Sbjct: 442 VHQNGNGVVAVHNENETLLLANKLNQVYLETVNATGSVYMTHAVVGGVYMIRFAVGSTLT 501

Query: 484 MESHVRAAWTVVQEHLE 500
            E HV  AW V+QEH +
Sbjct: 502 EERHVIHAWKVLQEHAD 518

Source: Papaver somniferum

Species: Papaver somniferum

Genus: Papaver

Family: Papaveraceae

Order: Ranunculales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	502
TAIR|locus:2038937	490	AAS "AT2G20340" [Arabidopsis t	0.896	0.918	0.515	1.3e-141
TAIR|locus:2139855	547	TYRDC "L-tyrosine decarboxylas	0.808	0.742	0.562	9.1e-141
ZFIN|ZDB-GENE-040426-2656	480	ddc "dopa decarboxylase" [Dani	0.810	0.847	0.430	6.7e-100
UNIPROTKB|E1BV90	485	DDC "Uncharacterized protein"	0.828	0.857	0.421	1.4e-99
MGI|MGI:94876	480	Ddc "dopa decarboxylase" [Mus	0.804	0.841	0.419	6e-97
UNIPROTKB|P27718	487	DDC "Aromatic-L-amino-acid dec	0.804	0.829	0.417	6e-97
UNIPROTKB|P20711	480	DDC "Aromatic-L-amino-acid dec	0.804	0.841	0.428	7.7e-97
RGD|2494	480	Ddc "dopa decarboxylase (aroma	0.804	0.841	0.417	9.8e-97
UNIPROTKB|P80041	486	DDC "Aromatic-L-amino-acid dec	0.804	0.831	0.419	1.1e-95
FB|FBgn0000422	510	Ddc "Dopa decarboxylase" [Dros	0.824	0.811	0.418	3.8e-95

TAIR|locus:2038937 AAS "AT2G20340" [Arabidopsis thaliana (taxid:3702)]

 Score = 1249 (444.7 bits), Expect = 1.3e-141, Sum P(2) = 1.3e-141
 Identities = 238/462 (51%), Positives = 317/462 (68%)

Query:     6 AQEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQE 65
             +++ R  GH+ VDF+A+YYK I+ +PV SQV+PGYL K LP+SAP  PE+++ +L DV+ 
Sbjct:    14 SEQLREYGHLMVDFIADYYKTIEDFPVLSQVQPGYLHKLLPDSAPDHPETLDQVLDDVRA 73

Query:    66 HIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWL 125
              I+PG+THWQSP++FAY+P+ SSVAG +GEMLS+G  +VG  W++SPAA ELE IV+DW+
Sbjct:    74 KILPGVTHWQSPSFFAYYPSNSSVAGFLGEMLSAGLGIVGFSWVTSPAATELEMIVLDWV 133

Query:   126 GQMLDLPKSFLFSGNGGGVIQGXXXXXXXXXXXXXRDRVLKKIGRENISKLVVYSSDQTH 185
              ++L+LP+ F+  GNGGGVIQG             RD+VL+ +G+  + KLVVYSSDQTH
Sbjct:   134 AKLLNLPEQFMSKGNGGGVIQGSASEAVLVVLIAARDKVLRSVGKNALEKLVVYSSDQTH 193

Query:   186 CAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTA 245
              A QKA QI GI  +N R + T  S++Y L  ES+   ++ D+EA LIP FLCA VGTT+
Sbjct:   194 SALQKACQIAGIHPENCRVLTTDSSTNYALRPESLQEAVSRDLEAGLIPFFLCANVGTTS 253

Query:   246 ITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFT 305
              TAVDPL  L  +A   GIW HVDAAYAGSACICPE+R +IDGVE  DSF+ N HKW  T
Sbjct:   254 STAVDPLAALGKIANSNGIWFHVDAAYAGSACICPEYRQYIDGVETADSFNMNAHKWFLT 313

Query:   306 TLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWV 365
               DC  LWVKD   L   LSTNP++LKN+A+        V YKDWQI L RRFRSLKLW+
Sbjct:   314 NFDCSLLWVKDQDSLTLALSTNPEFLKNKASQAN---LVVDYKDWQIPLGRRFRSLKLWM 370

Query:   366 VIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRT 425
             V+R +G   L+++IR+H+ +AK FE+LV+ D  FE+  PR F+LVCFR+ P  V D+ + 
Sbjct:   371 VLRLYGSETLKSYIRNHIKLAKEFEQLVSQDPNFEIVTPRIFALVCFRLVP--VKDEEK- 427

Query:   426 KYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAI 467
             K  N    + R+  +    N   +  +    +SGK+ +  AI
Sbjct:   428 KCNN----RNRELLDA--VNSSGKLFMSHTALSGKIVLRCAI 463

GO:0004837 "tyrosine decarboxylase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0006520 "cellular amino acid metabolic process" evidence=ISS

GO:0009611 "response to wounding" evidence=IEP

GO:1990055 "phenylacetaldehyde synthase activity" evidence=IDA

GO:0006559 "L-phenylalanine catabolic process" evidence=IDA

TAIR|locus:2139855 TYRDC "L-tyrosine decarboxylase" [Arabidopsis thaliana (taxid:3702)]

 Score = 1229 (437.7 bits), Expect = 9.1e-141, Sum P(2) = 9.1e-141
 Identities = 231/411 (56%), Positives = 297/411 (72%)

Query:    10 RRQGHMFVDFMAEYYKNIDK----YPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQE 65
             R QGH+ VDF+A+YYKN+      +PV SQV+PGYL+  LP+SAP  PES++ +L DV +
Sbjct:    66 REQGHIMVDFIADYYKNLQDSPQDFPVLSQVQPGYLRDMLPDSAPERPESLKELLDDVSK 125

Query:    66 HIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWL 125
              I+PGITHWQSP+YFAY+ +++SVAG +GEML++G +VVG  W++SPAA ELE IV+DWL
Sbjct:   126 KIMPGITHWQSPSYFAYYASSTSVAGFLGEMLNAGLSVVGFTWLTSPAATELEIIVLDWL 185

Query:   126 GQMLDLPKSFLFSGNGGGVIQGXXXXXXXXXXXXXRDRVLKKIGRENISKLVVYSSDQTH 185
              ++L LP  FL +GNGGGVIQG             RDR+LKK+G+  + +LVVY SDQTH
Sbjct:   186 AKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTH 245

Query:   186 CAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTA 245
              +F+KA  I GI  +NIR +KT  S++YG+  ES+   I+ D+    IP F+CATVGTT+
Sbjct:   246 SSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTS 305

Query:   246 ITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFT 305
               AVDPL PL ++AK++GIW+HVDAAYAG+ACICPE+R FIDG+E  DSF+ N HKWLF 
Sbjct:   306 SAAVDPLVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFA 365

Query:   306 TLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWV 365
                C  LWVKD   L+  L TNP+YL+ +    + K+  V YKDWQI+L RRFRSLKLW+
Sbjct:   366 NQTCSPLWVKDRYSLIDALKTNPEYLEFKVKVSK-KDTVVNYKDWQISLSRRFRSLKLWM 424

Query:   366 VIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTP 416
             V+R +G  NLRNFIR HV +AK FE  V  D  FEV   R FSLVCFR+ P
Sbjct:   425 VLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYFSLVCFRLAP 475

GO:0003824 "catalytic activity" evidence=IEA

GO:0004837 "tyrosine decarboxylase activity" evidence=ISS;IDA

GO:0005737 "cytoplasm" evidence=ISM;IDA

GO:0006520 "cellular amino acid metabolic process" evidence=ISS

GO:0016831 "carboxy-lyase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0004058 "aromatic-L-amino-acid decarboxylase activity" evidence=IDA

GO:0009414 "response to water deprivation" evidence=IEP

GO:0009611 "response to wounding" evidence=IEP

GO:1901695 "tyramine biosynthetic process" evidence=IMP

ZFIN|ZDB-GENE-040426-2656 ddc "dopa decarboxylase" [Danio rerio (taxid:7955)]

 Score = 921 (329.3 bits), Expect = 6.7e-100, Sum P(2) = 6.7e-100
 Identities = 186/432 (43%), Positives = 259/432 (59%)

Query:     6 AQEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQE 65
             A EFRR+G   VD++A+Y +NI+K  V   VEPGYL+  +PE AP  PES E +++D++ 
Sbjct:     3 AAEFRRRGREMVDYVADYIENIEKRQVYPDVEPGYLRSLIPEEAPEEPESYEDVVKDIER 62

Query:    66 HIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWL 125
              I+PG+THW SP ++AYFP   S   ++ ++L      +G  W +SPA  ELE +++DWL
Sbjct:    63 VIMPGVTHWHSPYFYAYFPTAHSYPAMLADILCGAIGCIGFSWAASPACTELETVMLDWL 122

Query:   126 GQMLDLPKSFLFS--GNGGGVIQGXXXXXXXXXXXXXRDRVLKKIGREN--------ISK 175
             G+ML LP+ FL    G GGGVIQ              R ++++ I  ++        ISK
Sbjct:   123 GKMLKLPEDFLAGTKGKGGGVIQSTASEATLITLLAARSKIVRLIQADHPDRSETDIISK 182

Query:   176 LVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPL 235
             LV YSSDQ H + ++A  I G+  K I     +K S  G + E +L +   D  A LIP 
Sbjct:   183 LVAYSSDQAHSSVERAGLIGGVRMKKIPT--DSKFSVRGDALERILKE---DKAAGLIPF 237

Query:   236 FLCATVGTTAITAVD---PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECV 292
             F CAT+GTTA  A D    L P+C+  K   +W+H+DAAYAGSA ICPEFR  ++G+E  
Sbjct:   238 FFCATLGTTASCAFDCITELGPICNAEK---MWMHIDAAYAGSAFICPEFRPLLNGIEFA 294

Query:   293 DSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQI 352
             DSF+FNPHKWL    DC  +WVK  + ++      P YLK+   D +       Y+ WQI
Sbjct:   295 DSFNFNPHKWLLINFDCSAMWVKKRADIIGAFKMEPLYLKH---DHQESGLVTDYRHWQI 351

Query:   353 TLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCF 412
              L RRFRSLK+W V R +G+  L+ +IR HVG+AK FE  V +D+RFE++      LVCF
Sbjct:   352 PLGRRFRSLKMWFVFRMYGLKALQAYIRKHVGLAKEFEAFVRADQRFEISADVVMGLVCF 411

Query:   413 RVT-PSAVMDKL 423
             R+  P+ + + L
Sbjct:   412 RLKGPNELSENL 423

GO:0016831 "carboxy-lyase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0019752 "carboxylic acid metabolic process" evidence=IEA

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0016829 "lyase activity" evidence=IEA

UNIPROTKB|E1BV90 DDC "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 921 (329.3 bits), Expect = 1.4e-99, Sum P(2) = 1.4e-99
 Identities = 183/434 (42%), Positives = 258/434 (59%)

Query:     6 AQEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQE 65
             A  F ++G   VD++A+Y + I+K  V   VEPGYL+  +P+ AP  PES E + +D+++
Sbjct:     3 ATAFHKRGKEMVDYVADYLEKIEKRQVFPNVEPGYLRTLIPDCAPQDPESFEDVFKDIEK 62

Query:    66 HIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWL 125
              I+PG+THW SP +FAYFP+ SS   ++ +ML  G   VG  W +SPA  ELE +++DWL
Sbjct:    63 IIMPGVTHWHSPYFFAYFPSASSFPALLADMLCGGIGCVGFSWAASPACTELETVMLDWL 122

Query:   126 GQMLDLPKSFLFS--GNGGGVIQGXXXXXXXXXXXXXRDRVLKKIGREN--------ISK 175
             G+M+ LP+ FL    G GGGVIQG             R + ++++  E         + +
Sbjct:   123 GKMISLPEEFLAGRDGQGGGVIQGSASEATLVALLAARTKTIRRVRSEKPELTEADIMGR 182

Query:   176 LVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPL 235
             LV Y+SDQ H + ++AA I G+  K++ +  T   + +G + + +L +   D  + LIP 
Sbjct:   183 LVAYASDQAHSSVERAALISGVKMKSVPSDDTF--AVHGSALKKILDE---DKASGLIPF 237

Query:   236 FLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSF 295
             F CAT+GTT   + D L  L  +  +  IW+H+DAAYAGSA ICPEFRHF++GVE  DSF
Sbjct:   238 FFCATLGTTPCCSFDKLLELGPICNKENIWMHIDAAYAGSAFICPEFRHFLNGVEFADSF 297

Query:   296 SFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLC 355
             +FNPHKWL    DC  +WVK  S L+      P YL++    QE       Y+ WQI L 
Sbjct:   298 NFNPHKWLLVNFDCSAMWVKKRSDLIGAFKLEPLYLQHH--HQE-SGLITDYRHWQIPLG 354

Query:   356 RRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVT 415
             RRFRSLKLW V+R +GV  L+  IR HV ++  FE LV  D+RFE+       LVCFR+ 
Sbjct:   355 RRFRSLKLWFVLRMYGVTGLQEHIRKHVRLSHQFEHLVLQDERFEICAEVVLGLVCFRLK 414

Query:   416 PSAVMDKLRTKYKN 429
              S  ++K   K  N
Sbjct:   415 GSNELNKALLKSIN 428

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

GO:0016831 "carboxy-lyase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0009636 "response to toxic substance" evidence=IEA

MGI|MGI:94876 Ddc "dopa decarboxylase" [Mus musculus (taxid:10090)]

 Score = 903 (322.9 bits), Expect = 6.0e-97, Sum P(2) = 6.0e-97
 Identities = 177/422 (41%), Positives = 256/422 (60%)

Query:     6 AQEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQE 65
             ++EFRR+G   VD++A+Y   I+  PV   VEPGYL+  +P +AP  PE+ E I++D+++
Sbjct:     3 SREFRRRGKEMVDYIADYLDGIEGRPVYPDVEPGYLRPLIPATAPQEPETYEDIIKDIEK 62

Query:    66 HIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWL 125
              I+PG+THW SP +FAYFP  SS   ++ +ML      +G  W +SPA  ELE ++MDWL
Sbjct:    63 IIMPGVTHWHSPYFFAYFPTASSYPAMLADMLCGAIGCIGFSWAASPACTELETVMMDWL 122

Query:   126 GQMLDLPKSFLF--SGNGGGVIQGXXXXXXXXXXXXXRDRVLKKIGREN--------ISK 175
             G+ML+LP++FL   +G GGGVIQG             R +V++++   +        + K
Sbjct:   123 GKMLELPEAFLAGRAGEGGGVIQGSASEATLVALLAARTKVIRQLQAASPEFTQAAIMEK 182

Query:   176 LVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPL 235
             LV Y+SDQ H + ++A  I GI    ++A+ +    ++ + A ++   +  D  A LIP 
Sbjct:   183 LVAYTSDQAHSSVERAGLIGGI---KLKAVPS--DGNFSMRASALREALERDKAAGLIPF 237

Query:   236 FLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSF 295
             F+ AT+GTT+  + D L  +  +  Q G+W+H+DAAYAGSA ICPEFR+ ++GVE  DSF
Sbjct:   238 FVVATLGTTSCCSFDNLLEVGPICNQEGVWLHIDAAYAGSAFICPEFRYLLNGVEFADSF 297

Query:   296 SFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLC 355
             +FNPHKWL    DC  +WVK  + L    + +P YLK+   D         Y+ WQI L 
Sbjct:   298 NFNPHKWLLVNFDCSAMWVKRRTDLTGAFNMDPVYLKHSHQDSG---FITDYRHWQIPLG 354

Query:   356 RRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVT 415
             RRFRSLK+W V R +GV  L+ +IR HV ++  FE LV  D RFE+       LVCFR+ 
Sbjct:   355 RRFRSLKMWFVFRMYGVKGLQAYIRKHVELSHEFESLVRQDPRFEICTEVILGLVCFRLK 414

Query:   416 PS 417
              S
Sbjct:   415 GS 416

GO:0003824 "catalytic activity" evidence=IEA

GO:0004058 "aromatic-L-amino-acid decarboxylase activity" evidence=ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

GO:0008021 "synaptic vesicle" evidence=ISO

GO:0009636 "response to toxic substance" evidence=IDA

GO:0015842 "synaptic vesicle amine transport" evidence=ISO

GO:0016597 "amino acid binding" evidence=ISO

GO:0016829 "lyase activity" evidence=IEA

GO:0016831 "carboxy-lyase activity" evidence=IEA

GO:0019752 "carboxylic acid metabolic process" evidence=IEA

GO:0019904 "protein domain specific binding" evidence=ISO

GO:0030170 "pyridoxal phosphate binding" evidence=ISO

GO:0030424 "axon" evidence=ISO

GO:0042416 "dopamine biosynthetic process" evidence=ISO

GO:0042423 "catecholamine biosynthetic process" evidence=IEA

GO:0042427 "serotonin biosynthetic process" evidence=ISO

GO:0043025 "neuronal cell body" evidence=ISO

UNIPROTKB|P27718 DDC "Aromatic-L-amino-acid decarboxylase" [Bos taurus (taxid:9913)]

 Score = 891 (318.7 bits), Expect = 6.0e-97, Sum P(2) = 6.0e-97
 Identities = 176/422 (41%), Positives = 250/422 (59%)

Query:     6 AQEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQE 65
             A EFRR+G   VD++A+Y + I+   V   V+PGYL+  +P +AP  PE+ E I++D+++
Sbjct:     3 ASEFRRRGKEMVDYVADYLEGIEGRQVFPDVDPGYLRPLIPTTAPQEPETFEAIIEDIEK 62

Query:    66 HIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWL 125
              I+PG+THW SP +FAYFP  SS   ++ +ML      +G  W +SPA  ELE ++MDWL
Sbjct:    63 IIMPGVTHWHSPYFFAYFPTASSYPAMLADMLCGAIGCIGFSWAASPACTELETVMMDWL 122

Query:   126 GQMLDLPKSFLF--SGNGGGVIQGXXXXXXXXXXXXXRDRVLKKIGREN--------ISK 175
             G+ML LP++FL   +G GGGVIQG             R +V + +   +        + K
Sbjct:   123 GKMLQLPEAFLAGEAGEGGGVIQGTASEATLVALLAARTKVTRHLQAASPELMQAAIMEK 182

Query:   176 LVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPL 235
             LV Y+SDQ H + +KA  I G+    ++AI +     + + A ++   +  D  A LIP 
Sbjct:   183 LVAYASDQAHSSVEKAGLIGGV---RLKAIPS--DGKFAMRASALQEALERDKAAGLIPF 237

Query:   236 FLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSF 295
             F+ AT+GTT+  + D L  +  +  + G+W+HVDAAYAGSA ICPEFRH ++GVE  DSF
Sbjct:   238 FVVATLGTTSCCSFDNLLEVGPICHEEGLWLHVDAAYAGSAFICPEFRHLLNGVEFADSF 297

Query:   296 SFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLC 355
             +FNPHKWL    DC  +WVK  + L      +P YL++   D         Y+ WQ+ L 
Sbjct:   298 NFNPHKWLLVNFDCSAMWVKKRTDLTGAFRLDPVYLRHSHQDSG---LITDYRHWQLPLG 354

Query:   356 RRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVT 415
             RRFRSLK+W V R +GV  L+ +IR HV ++  FE LV  D RFE+       LVCFR+ 
Sbjct:   355 RRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHAFEALVRQDTRFEICAEVILGLVCFRLK 414

Query:   416 PS 417
              S
Sbjct:   415 GS 416

GO:0042416 "dopamine biosynthetic process" evidence=IEA

GO:0004058 "aromatic-L-amino-acid decarboxylase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

UNIPROTKB|P20711 DDC "Aromatic-L-amino-acid decarboxylase" [Homo sapiens (taxid:9606)]

 Score = 901 (322.2 bits), Expect = 7.7e-97, Sum P(2) = 7.7e-97
 Identities = 181/422 (42%), Positives = 249/422 (59%)

Query:     6 AQEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQE 65
             A EFRR+G   VD+MA Y + I+   V   VEPGYL+  +P +AP  P++ E I+ DV++
Sbjct:     3 ASEFRRRGKEMVDYMANYMEGIEGRQVYPDVEPGYLRPLIPAAAPQEPDTFEDIINDVEK 62

Query:    66 HIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWL 125
              I+PG+THW SP +FAYFP  SS   ++ +ML      +G  W +SPA  ELE ++MDWL
Sbjct:    63 IIMPGVTHWHSPYFFAYFPTASSYPAMLADMLCGAIGCIGFSWAASPACTELETVMMDWL 122

Query:   126 GQMLDLPKSFLF--SGNGGGVIQGXXXXXXXXXXXXXRDRVLKKIGREN--------ISK 175
             G+ML+LPK+FL   +G GGGVIQG             R +V+ ++   +        + K
Sbjct:   123 GKMLELPKAFLNEKAGEGGGVIQGSASEATLVALLAARTKVIHRLQAASPELTQAAIMEK 182

Query:   176 LVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPL 235
             LV YSSDQ H + ++A  I G+    ++AI +    ++ + A ++   +  D  A LIP 
Sbjct:   183 LVAYSSDQAHSSVERAGLIGGV---KLKAIPS--DGNFAMRASALQEALERDKAAGLIPF 237

Query:   236 FLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSF 295
             F+ AT+GTT   + D L  +  +  +  IW+HVDAAYAGSA ICPEFRH ++GVE  DSF
Sbjct:   238 FMVATLGTTTCCSFDNLLEVGPICNKEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSF 297

Query:   296 SFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLC 355
             +FNPHKWL    DC  +WVK  + L      +P YLK+   D         Y+ WQI L 
Sbjct:   298 NFNPHKWLLVNFDCSAMWVKKRTDLTGAFRLDPTYLKHSHQDSG---LITDYRHWQIPLG 354

Query:   356 RRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVT 415
             RRFRSLK+W V R +GV  L+ +IR HV ++  FE LV  D RFE+       LVCFR+ 
Sbjct:   355 RRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFESLVRQDPRFEICVEVILGLVCFRLK 414

Query:   416 PS 417
              S
Sbjct:   415 GS 416

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0007623 "circadian rhythm" evidence=IEA

GO:0008021 "synaptic vesicle" evidence=IEA

GO:0010259 "multicellular organismal aging" evidence=IEA

GO:0015842 "synaptic vesicle amine transport" evidence=IEA

GO:0016597 "amino acid binding" evidence=IEA

GO:0019904 "protein domain specific binding" evidence=IEA

GO:0030424 "axon" evidence=IEA

GO:0033076 "isoquinoline alkaloid metabolic process" evidence=IEA

GO:0035690 "cellular response to drug" evidence=IEA

GO:0042427 "serotonin biosynthetic process" evidence=IEA

GO:0043025 "neuronal cell body" evidence=IEA

GO:0046684 "response to pyrethroid" evidence=IEA

GO:0052314 "phytoalexin metabolic process" evidence=IEA

GO:0071312 "cellular response to alkaloid" evidence=IEA

GO:0071363 "cellular response to growth factor stimulus" evidence=IEA

GO:0042416 "dopamine biosynthetic process" evidence=IEA

GO:0004058 "aromatic-L-amino-acid decarboxylase activity" evidence=IDA;TAS

GO:0005829 "cytosol" evidence=TAS

GO:0034641 "cellular nitrogen compound metabolic process" evidence=TAS

GO:0042423 "catecholamine biosynthetic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

GO:0046219 "indolalkylamine biosynthetic process" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

RGD|2494 Ddc "dopa decarboxylase (aromatic L-amino acid decarboxylase)" [Rattus norvegicus (taxid:10116)]

 Score = 900 (321.9 bits), Expect = 9.8e-97, Sum P(2) = 9.8e-97
 Identities = 176/422 (41%), Positives = 255/422 (60%)

Query:     6 AQEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQE 65
             ++EFRR+G   VD++A+Y   I+  PV   VEPGYL+  +P +AP  PE+ E I++D+++
Sbjct:     3 SREFRRRGKEMVDYIADYLDGIEGRPVYPDVEPGYLRALIPTTAPQEPETYEDIIRDIEK 62

Query:    66 HIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWL 125
              I+PG+THW SP +FAYFP  SS   ++ +ML      +G  W +SPA  ELE ++MDWL
Sbjct:    63 IIMPGVTHWHSPYFFAYFPTASSYPAMLADMLCGAIGCIGFSWAASPACTELETVMMDWL 122

Query:   126 GQMLDLPKSFLF--SGNGGGVIQGXXXXXXXXXXXXXRDRVLKKIGREN--------ISK 175
             G+ML+LP++FL   +G GGGVIQG             R ++++++   +        + K
Sbjct:   123 GKMLELPEAFLAGRAGEGGGVIQGSASEATLVALLAARTKMIRQLQAASPELTQAALMEK 182

Query:   176 LVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPL 235
             LV Y+SDQ H + ++A  I G+    I+AI +    +Y + A ++   +  D  A LIP 
Sbjct:   183 LVAYTSDQAHSSVERAGLIGGV---KIKAIPS--DGNYSMRAAALREALERDKAAGLIPF 237

Query:   236 FLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSF 295
             F+  T+GTT+  + D L  +  +  Q G+W+H+DAAYAGSA ICPEFR+ ++GVE  DSF
Sbjct:   238 FVVVTLGTTSCCSFDNLLEVGPICNQEGVWLHIDAAYAGSAFICPEFRYLLNGVEFADSF 297

Query:   296 SFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLC 355
             +FNPHKWL    DC  +WVK  + L    + +P YL++   D         Y+ WQI L 
Sbjct:   298 NFNPHKWLLVNFDCSAMWVKKRTDLTEAFNMDPVYLRHSHQDSG---LITDYRHWQIPLG 354

Query:   356 RRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVT 415
             RRFRSLK+W V R +GV  L+ +IR HV ++  FE LV  D RFE+       LVCFR+ 
Sbjct:   355 RRFRSLKMWFVFRMYGVKGLQAYIRKHVKLSHEFESLVRQDPRFEICTEVILGLVCFRLK 414

Query:   416 PS 417
              S
Sbjct:   415 GS 416

GO:0004058 "aromatic-L-amino-acid decarboxylase activity" evidence=ISO;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005622 "intracellular" evidence=TAS

GO:0005737 "cytoplasm" evidence=IDA

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

GO:0007623 "circadian rhythm" evidence=IEP

GO:0008021 "synaptic vesicle" evidence=IDA

GO:0009636 "response to toxic substance" evidence=ISO

GO:0010259 "multicellular organismal aging" evidence=IEP

GO:0015842 "synaptic vesicle amine transport" evidence=IDA

GO:0016597 "amino acid binding" evidence=IDA

GO:0019904 "protein domain specific binding" evidence=IPI

GO:0030170 "pyridoxal phosphate binding" evidence=IDA;TAS

GO:0030424 "axon" evidence=IDA

GO:0033076 "isoquinoline alkaloid metabolic process" evidence=IEP

GO:0035690 "cellular response to drug" evidence=IEP

GO:0042416 "dopamine biosynthetic process" evidence=IEA;IDA

GO:0042417 "dopamine metabolic process" evidence=TAS

GO:0042423 "catecholamine biosynthetic process" evidence=TAS

GO:0042427 "serotonin biosynthetic process" evidence=IDA

GO:0043025 "neuronal cell body" evidence=IDA

GO:0046684 "response to pyrethroid" evidence=IEP

GO:0052314 "phytoalexin metabolic process" evidence=IEP

GO:0071312 "cellular response to alkaloid" evidence=IEP

GO:0071363 "cellular response to growth factor stimulus" evidence=IEP

UNIPROTKB|P80041 DDC "Aromatic-L-amino-acid decarboxylase" [Sus scrofa (taxid:9823)]

 Score = 891 (318.7 bits), Expect = 1.1e-95, Sum P(2) = 1.1e-95
 Identities = 177/422 (41%), Positives = 250/422 (59%)

Query:     6 AQEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQE 65
             A +FRR+G   VD+MA+Y + I+   V   V+PGYL+  +P +AP  P++ E ILQDV++
Sbjct:     3 ASDFRRRGKEMVDYMADYLEGIEGRQVYPDVQPGYLRPLIPATAPQEPDTFEDILQDVEK 62

Query:    66 HIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWL 125
              I+PG+THW SP +FAYFP  SS   ++ +ML      +G  W +SPA  ELE ++MDWL
Sbjct:    63 IIMPGVTHWHSPYFFAYFPTASSYPAMLADMLCGAIGCIGFSWAASPACTELETVMMDWL 122

Query:   126 GQMLDLPKSFLF--SGNGGGVIQGXXXXXXXXXXXXXRDRVLKKIGREN--------ISK 175
             G+ML LP++FL   +G GGGVIQG             R +V++++   +        + K
Sbjct:   123 GKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEK 182

Query:   176 LVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPL 235
             LV Y+SDQ H + ++A  I G+    ++AI +     + + A ++   +  D  A LIP 
Sbjct:   183 LVAYASDQAHSSVERAGLIGGV---KLKAIPS--DGKFAMRASALQEALERDKAAGLIPF 237

Query:   236 FLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSF 295
             F+ AT+GTT+  + D L  +  +  +  IW+HVDAAYAGSA ICPEFRH ++GVE  DSF
Sbjct:   238 FVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSF 297

Query:   296 SFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLC 355
             +FNPHKWL    DC  +WVK  + L      +P YLK+     +       Y+ WQ+ L 
Sbjct:   298 NFNPHKWLLVNFDCSAMWVKRRTDLTGAFKLDPVYLKHS---HQGSGLITDYRHWQLPLG 354

Query:   356 RRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVT 415
             RRFRSLK+W V R +GV  L+ +IR HV ++  FE  V  D RFEV       LVCFR+ 
Sbjct:   355 RRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQDPRFEVCAEVTLGLVCFRLK 414

Query:   416 PS 417
              S
Sbjct:   415 GS 416

GO:0042416 "dopamine biosynthetic process" evidence=IEA

GO:0004058 "aromatic-L-amino-acid decarboxylase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

FB|FBgn0000422 Ddc "Dopa decarboxylase" [Drosophila melanogaster (taxid:7227)]

 Score = 896 (320.5 bits), Expect = 3.8e-95, Sum P(2) = 3.8e-95
 Identities = 182/435 (41%), Positives = 254/435 (58%)

Query:     6 AQEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQE 65
             A EF+      VDF+AEY +NI +  V  +V+PGYLK  +P++AP  PE  + ++QD++ 
Sbjct:    38 APEFKDFAKTMVDFIAEYLENIRERRVLPEVKPGYLKPLIPDAAPEKPEKWQDVMQDIER 97

Query:    66 HIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWL 125
              I+PG+THW SP + AYFP  +S   IV +MLS     +G  WI+SPA  ELE ++MDWL
Sbjct:    98 VIMPGVTHWHSPKFHAYFPTANSYPAIVADMLSGAIACIGFTWIASPACTELEVVMMDWL 157

Query:   126 GQMLDLPKSFLF--SGNGGGVIQGXXXXXXXXXXXXXRDRVLKKIGR------EN--ISK 175
             G+ML+LP  FL    G GGGVIQG             + + LK++        E+  + K
Sbjct:   158 GKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGK 217

Query:   176 LVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPL 235
             LV Y SDQ H + ++A  + G+    +R++++      G + E  + Q   DV   LIP 
Sbjct:   218 LVGYCSDQAHSSVERAGLLGGV---KLRSVQSENHRMRGAALEKAIEQ---DVAEGLIPF 271

Query:   236 FLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSF 295
             +   T+GTT   A D L     V  +  +W+HVDAAYAGSA ICPE+RH + G+E  DSF
Sbjct:   272 YAVVTLGTTNSCAFDYLDECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSF 331

Query:   296 SFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLC 355
             +FNPHKW+    DC  +W+KDPS +++  + +P YLK++     P      Y+ WQI L 
Sbjct:   332 NFNPHKWMLVNFDCSAMWLKDPSWVVNAFNVDPLYLKHDMQGSAPD-----YRHWQIPLG 386

Query:   356 RRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVT 415
             RRFR+LKLW V+R +GV NL+  IR H   AK F  L  +D RFE+A   N  LVCFR+ 
Sbjct:   387 RRFRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVADSRFELAAEINMGLVCFRLK 446

Query:   416 PSAVMDKLRTKYKNG 430
              S   ++   K  NG
Sbjct:   447 GSNERNEALLKRING 461

GO:0006585 "dopamine biosynthetic process from tyrosine" evidence=IMP

GO:0006587 "serotonin biosynthetic process from tryptophan" evidence=IMP

GO:0004058 "aromatic-L-amino-acid decarboxylase activity" evidence=NAS;IMP;TAS

GO:0007611 "learning or memory" evidence=NAS

GO:0006584 "catecholamine metabolic process" evidence=NAS

GO:0008062 "eclosion rhythm" evidence=NAS

GO:0007619 "courtship behavior" evidence=NAS

GO:0048066 "developmental pigmentation" evidence=TAS

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0040007 "growth" evidence=IMP

GO:0009611 "response to wounding" evidence=IEP

GO:0040040 "thermosensory behavior" evidence=IMP

GO:0043052 "thermotaxis" evidence=IMP

GO:0007615 "anesthesia-resistant memory" evidence=IDA

GO:0048082 "regulation of adult chitin-containing cuticle pigmentation" evidence=IGI;IMP

GO:0035220 "wing disc development" evidence=IMP

GO:0048085 "adult chitin-containing cuticle pigmentation" evidence=IMP

GO:0007616 "long-term memory" evidence=IGI

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O88533	DDC_MOUSE	4, ., 1, ., 1, ., 2, 8	0.3984	0.9103	0.9520	yes	no
P54768	TYDC1_PAPSO	4, ., 1, ., 1, ., 2, 5	0.6553	0.9601	0.9305	N/A	no
P54769	TYDC2_PAPSO	4, ., 1, ., 1, ., 2, 5	0.6478	0.9780	0.9246	N/A	no
P14173	DDC_RAT	4, ., 1, ., 1, ., 2, 8	0.3944	0.9103	0.9520	yes	no
P20711	DDC_HUMAN	4, ., 1, ., 1, ., 2, 8	0.4063	0.9103	0.9520	yes	no
P80041	DDC_PIG	4, ., 1, ., 1, ., 2, 8	0.4011	0.9083	0.9382	yes	no
Q7XHL3	TYDC1_ORYSJ	4, ., 1, ., 1, ., 2, 5	0.5182	0.9342	0.9436	yes	no
P05031	DDC_DROME	4, ., 1, ., 1, ., 2, 8	0.396	0.9003	0.8862	yes	no
P17770	DDC_CATRO	4, ., 1, ., 1, ., 2, 8	0.5467	0.9322	0.936	N/A	no
P54771	TYDC5_PAPSO	4, ., 1, ., 1, ., 2, 5	0.6593	0.9621	0.9235	N/A	no
P54770	TYDC3_PAPSO	4, ., 1, ., 1, ., 2, 5	0.6452	0.9780	0.9212	N/A	no
P22781	DDC_CAVPO	4, ., 1, ., 1, ., 2, 8	0.3964	0.9103	0.9520	yes	no
Q06088	TYDC4_PETCR	4, ., 1, ., 1, ., 2, 5	0.6195	0.9621	0.9507	N/A	no
Q9M0G4	TYDC2_ARATH	4, ., 1, ., 1, ., 2, 5	0.5329	0.9442	0.8697	yes	no
P27718	DDC_BOVIN	4, ., 1, ., 1, ., 2, 8	0.4043	0.9103	0.9383	yes	no
Q06087	TYDC3_PETCR	4, ., 1, ., 1, ., 2, 5	0.6195	0.9621	0.9360	N/A	no
Q06086	TYDC2_PETCR	4, ., 1, ., 1, ., 2, 5	0.6195	0.9621	0.9396	N/A	no
Q06085	TYDC1_PETCR	4, ., 1, ., 1, ., 2, 5	0.6363	0.8605	1.0	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	4.1.1.25	0.991
3rd Layer	4.1.1	0.976

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00028367001	SubName- Full=Chromosome chr10 scaffold_43, whole genome shotgun sequence; (492 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00037462001	RecName- Full=Aspartate aminotransferase; EC=2.6.1.1; (427 aa)						•			0.899
	GSVIVG00032723001	RecName- Full=Aspartate aminotransferase; EC=2.6.1.1; (410 aa)						•			0.899
	GSVIVG00032463001	RecName- Full=Aspartate aminotransferase; EC=2.6.1.1; (450 aa)						•			0.899
	GSVIVG00027735001	SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (422 aa)						•			0.899
	GSVIVG00018772001	RecName- Full=Aspartate aminotransferase; EC=2.6.1.1; (423 aa)						•			0.899
	GSVIVG00018632001	SubName- Full=Chromosome chr12 scaffold_18, whole genome shotgun sequence; (419 aa)						•			0.899
	GSVIVG00018631001	SubName- Full=Chromosome chr12 scaffold_18, whole genome shotgun sequence; (419 aa)						•			0.899
	GSVIVG00018628001	SubName- Full=Chromosome chr12 scaffold_18, whole genome shotgun sequence; (419 aa)						•			0.899
	GSVIVG00016723001	RecName- Full=Aspartate aminotransferase; EC=2.6.1.1; (411 aa)						•			0.899
	GSVIVG00016002001	SubName- Full=Chromosome chr17 scaffold_12, whole genome shotgun sequence; (703 aa)						•			0.899

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	502
PLN02880	490	PLN02880, PLN02880, tyrosine decarboxylase	0.0
PLN02590	539	PLN02590, PLN02590, probable tyrosine decarboxylas	0.0
pfam00282	373	pfam00282, Pyridoxal_deC, Pyridoxal-dependent deca	1e-168
cd06450	345	cd06450, DOPA_deC_like, DOPA decarboxylase family	1e-106
COG0076	460	COG0076, GadB, Glutamate decarboxylase and related	7e-67
TIGR03799	522	TIGR03799, NOD_PanD_pyr, putative pyridoxal-depend	7e-19
PRK13520	371	PRK13520, PRK13520, L-tyrosine decarboxylase; Prov	3e-15
TIGR03812	373	TIGR03812, tyr_de_CO2_Arch, tyrosine decarboxylase	6e-15
cd01494	170	cd01494, AAT_I, Aspartate aminotransferase (AAT) s	6e-09
PRK02769	380	PRK02769, PRK02769, histidine decarboxylase; Provi	4e-07
TIGR03811	608	TIGR03811, tyr_de_CO2_Ent, tyrosine decarboxylase,	9e-05
COG0520	405	COG0520, csdA, Selenocysteine lyase/Cysteine desul	0.002
PLN03032	374	PLN03032, PLN03032, serine decarboxylase; Provisio	0.002

>gnl|CDD|215475 PLN02880, PLN02880, tyrosine decarboxylase

 Score =  644 bits (1662), Expect = 0.0
 Identities = 278/497 (55%), Positives = 361/497 (72%), Gaps = 26/497 (5%)

Query: 1   MDQAYAQEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETIL 60
           MD   A++ R  GH  VDF+A+YYK+I+ +PV SQV+PGYL++ LP+SAP  PE+++ +L
Sbjct: 10  MD---AEQLRECGHRMVDFIADYYKSIENFPVLSQVQPGYLRELLPDSAPNQPETLDQVL 66

Query: 61  QDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENI 120
            DVQ  I+PG+THWQSPNYFAY+P+ SSVAG +GEMLS+G N+VG  WI+SPAA ELE I
Sbjct: 67  DDVQAKILPGVTHWQSPNYFAYYPSNSSVAGFLGEMLSAGLNIVGFSWITSPAATELEMI 126

Query: 121 VMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYS 180
           V+DWL ++L+LP+ FL +GNGGGVIQGT  EA+L  L AARDRVL+K+G+  + KLVVY+
Sbjct: 127 VLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYA 186

Query: 181 SDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCAT 240
           SDQTH A QKA QI GI  +N R +KT  S++Y L+ E +   I+ D+ + LIP FLCAT
Sbjct: 187 SDQTHSALQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCAT 246

Query: 241 VGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPH 300
           VGTT+ TAVDPL  L  +AK  G+W HVDAAYAGSACICPE+RH+IDGVE  DSF+ N H
Sbjct: 247 VGTTSSTAVDPLLELGKIAKSNGMWFHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAH 306

Query: 301 KWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRS 360
           KW  T  DC  LWVKD + L+ +LSTNP++LKN+A+        V YKDWQI L RRFRS
Sbjct: 307 KWFLTNFDCSLLWVKDRNALIQSLSTNPEFLKNKASQ---ANSVVDYKDWQIPLGRRFRS 363

Query: 361 LKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVM 420
           LKLW+V+R +GV NL+++IR+H+ +AK FE+LV  D RFEV  PR FSLVCFR+ P    
Sbjct: 364 LKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPRIFSLVCFRLVPPK-- 421

Query: 421 DKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGN 480
                             + E+  N+ N +LL+++N SGK+F++H ++ G YVLRFA G 
Sbjct: 422 ------------------NNEDNGNKLNHDLLDAVNSSGKIFISHTVLSGKYVLRFAVGA 463

Query: 481 SMTMESHVRAAWTVVQE 497
            +T E HV AAW V+Q+
Sbjct: 464 PLTEERHVTAAWKVLQD 480

Length = 490

>gnl|CDD|178200 PLN02590, PLN02590, probable tyrosine decarboxylase

 Score =  570 bits (1471), Expect = 0.0
 Identities = 267/501 (53%), Positives = 352/501 (70%), Gaps = 27/501 (5%)

Query: 6   AQEFRRQGHMFVDFMAEYYKNIDK----YPVRSQVEPGYLKKRLPESAPYSPESVETILQ 61
           ++  R QGH+ VDF+A+YYKN+      +PV SQV+PGYL+  LP+SAP  PES++ +L 
Sbjct: 56  SELLREQGHIMVDFIADYYKNLQDSPQDFPVLSQVQPGYLRDMLPDSAPERPESLKELLD 115

Query: 62  DVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIV 121
           DV + I+PGITHWQSP+YFAY+ +++SVAG +GEML++G +VVG  W++SPAA ELE IV
Sbjct: 116 DVSKKIMPGITHWQSPSYFAYYASSTSVAGFLGEMLNAGLSVVGFTWLTSPAATELEIIV 175

Query: 122 MDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSS 181
           +DWL ++L LP  FL +GNGGGVIQGT CEA+L  + AARDR+LKK+G+  + +LVVY S
Sbjct: 176 LDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGS 235

Query: 182 DQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATV 241
           DQTH +F+KA  I GI  +NIR +KT  S++YG+  ES+   I+ D+    IP F+CATV
Sbjct: 236 DQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATV 295

Query: 242 GTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHK 301
           GTT+  AVDPL PL ++AK++GIW+HVDAAYAG+ACICPE+R FIDG+E  DSF+ N HK
Sbjct: 296 GTTSSAAVDPLVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHK 355

Query: 302 WLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSL 361
           WLF    C  LWVKD   L+  L TNP+YL+ + +    K+  V YKDWQI+L RRFRSL
Sbjct: 356 WLFANQTCSPLWVKDRYSLIDALKTNPEYLEFKVSK---KDTVVNYKDWQISLSRRFRSL 412

Query: 362 KLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMD 421
           KLW+V+R +G  NLRNFIR HV +AK FE  V  D  FEV   R FSLVCFR+ P     
Sbjct: 413 KLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYFSLVCFRLAPVD--- 469

Query: 422 KLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNS 481
                             +E++ NE NRELL ++N +GK+F++H  + G +VLRFA G  
Sbjct: 470 -----------------GDEDQCNERNRELLAAVNSTGKIFISHTALSGKFVLRFAVGAP 512

Query: 482 MTMESHVRAAWTVVQEHLEAF 502
           +T E HV  AW ++Q+H   F
Sbjct: 513 LTEEKHVTEAWQIIQKHASKF 533

Length = 539

>gnl|CDD|215836 pfam00282, Pyridoxal_deC, Pyridoxal-dependent decarboxylase conserved domain

 Score =  478 bits (1232), Expect = e-168
 Identities = 189/379 (49%), Positives = 248/379 (65%), Gaps = 11/379 (2%)

Query: 38  PGYLKKRLPESAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEML 97
           PGYL+  LPE+AP  PE +  IL D++++I+PG+T W SPN+ AYFPA +S   ++G+ML
Sbjct: 1   PGYLRPLLPEAAPIIPEPLLDILGDIRKNIMPGVTTWHSPNFHAYFPAGNSYPSLLGDML 60

Query: 98  SSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTL 157
           S   N  G  W SSPA  ELEN+VMDWL +ML LPK FL SG GGGV+QG + E+ L  L
Sbjct: 61  SDAINCNGFTWESSPACTELENVVMDWLAKMLGLPKEFLGSGEGGGVLQGGSSESNLLAL 120

Query: 158 TAARDRVLKKI---GRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYG 214
            AAR + ++++   G+ ++ KLV Y+SDQ H + +KAA I G++   +R I T +  +  
Sbjct: 121 LAARTKWIRRMKAAGKPSLGKLVAYTSDQAHSSIEKAALIAGVE---LREIPTDE--NGK 175

Query: 215 LSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAG 274
           +    +   I  D E  LIP F+CAT+GTT   A DPL+ L D+  ++ +W+HVDAAYAG
Sbjct: 176 MRGMDLEKAIEEDKENGLIPFFVCATLGTTGSGAFDPLQELGDICNKYDLWLHVDAAYAG 235

Query: 275 SACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNE 334
           SA ICPEFRH++ G+E  DSFSFNPHKW+   LDC  LWV+D   L   L  NP+YL + 
Sbjct: 236 SAFICPEFRHWLFGIERADSFSFNPHKWMLVLLDCSALWVRDKGALQQALQFNPEYLGHN 295

Query: 335 ATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVT 394
                  +  V Y DWQI L RRFR LKLW V+R++GV  L+N IR HV +AK FE LV 
Sbjct: 296 DKQS---DVAVDYGDWQIPLSRRFRILKLWFVLRSYGVEGLQNQIRRHVELAKYFEALVR 352

Query: 395 SDKRFEVAFPRNFSLVCFR 413
            D RFE+   R   LVCFR
Sbjct: 353 KDSRFEICAERGLGLVCFR 371

Length = 373

>gnl|CDD|99743 cd06450, DOPA_deC_like, DOPA decarboxylase family

 Score =  319 bits (821), Expect = e-106
 Identities = 126/423 (29%), Positives = 183/423 (43%), Gaps = 81/423 (19%)

Query: 79  YFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFS 138
           + A F  T     ++ EML+S  N +   W  SPAA E+E  V++WL ++  LP     S
Sbjct: 1   FLAGFVTTMDPPALLLEMLTSAKNAIDFTWDESPAATEMEAEVVNWLAKLFGLP-----S 55

Query: 139 GNGGGVIQGTTCEALLCTLTAARDRV---LKKIGRENISKLVVYSSDQTHCAFQKAAQIV 195
            +  GV      E+ L  L AARDR    LK  G   I KLV+  SDQ H + +KAA  +
Sbjct: 56  EDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKAAAYL 115

Query: 196 GIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPL 255
            +    +R +   +     +  E++ + I+ D    L P+ + AT GTT   A+DPL+ +
Sbjct: 116 DV---KVRLVPVDEDGR--MDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEI 170

Query: 256 CDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVK 315
            D+A+++ +W+HVDAAY G     PE RH   G+E VDS S +PHK+    L C  + V 
Sbjct: 171 ADLAEKYDLWLHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPLGCSAVLV- 229

Query: 316 DPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANL 375
                                                      R+LKLW  +R FG    
Sbjct: 230 -------------------------------------------RALKLWATLRRFGRDGY 246

Query: 376 RNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQY 435
              I   V +AK    L+ +D  FE+    N SLVCFR+ PS  +D+L            
Sbjct: 247 GEHIDRIVDLAKYLAELIRADPGFELLGEPNLSLVCFRLKPSVKLDEL------------ 294

Query: 436 RQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVV 495
                       N +L + +N  G   +    +GG  VLRF   N +T      A    +
Sbjct: 295 ------------NYDLSDRLNERGGWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDI 342

Query: 496 QEH 498
           +  
Sbjct: 343 ERA 345

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine. Length = 345

>gnl|CDD|223154 COG0076, GadB, Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]

 Score =  222 bits (567), Expect = 7e-67
 Identities = 110/489 (22%), Positives = 187/489 (38%), Gaps = 56/489 (11%)

Query: 20  MAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQE-HIVPGITHWQSPN 78
           + +      K      + P +        AP   E +E +L ++ E  I   +     P 
Sbjct: 4   LIDKDMLNSKRYSGDSLSPLFGALSDSRMAPEKGEPLEEVLDELAELLIKDELYLDGHPR 63

Query: 79  YFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFS 138
                   + V  +  E+L S  N    D   SPAA ELE  V++ L  +L  P+     
Sbjct: 64  ANLAGFCPTRVPPVAAELLVSALNKNLGDPDESPAAAELEERVVNMLSDLLGAPEEAS-- 121

Query: 139 GNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENI---SKLVVYSSDQTHCAFQKAAQIV 195
              G    G T EA L  L AAR+R  K+   E+     K  +  S+  H +F+KAA+ +
Sbjct: 122 ---GTFTSGGT-EANLLALLAARERWRKRALAESGKPGGKPNIVCSETAHFSFEKAARYL 177

Query: 196 GIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPL 255
           G+  + +  + T     Y +  +++   I+ +     I   +  T GTT   ++D ++ L
Sbjct: 178 GLGLRRVPTVPTD----YRIDVDALEEAIDEN----TIGGVVVGTAGTTDTGSIDDIEEL 229

Query: 256 CDVAKQFGIWVHVDAAYAGSACICPEFRH-FIDGVECVDSFSFNPHKWLFTTLDCCCLWV 314
            D+A+++GIW+HVDAA+ G      E    +  G+E VDS + + HK+    + C  +  
Sbjct: 230 ADIAEEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSITVDGHKYGLAPIGCGVVLF 289

Query: 315 KDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITL-CRR--FRSLKLWVVIRNFG 371
           +D   L   L     YL              G      T+   R   ++L L+  +R  G
Sbjct: 290 RDEEALRRILIFADYYLP-------------GGGIPNFTILGSRPGRQALALYANLRRLG 336

Query: 372 VANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGT 431
               R  +   + +A+     +     FE+       +V FR+                 
Sbjct: 337 REGYRKLLDRTLELARYLAEELEKLGDFELVNEPELPIVAFRLKDDEDTL---------- 386

Query: 432 YDQYRQFSEEERTNEFNRELLESINVSGK--VFMTHAIVGGIYVLRFAAGNSMTMESHVR 489
                     ER +    ++   +   G   VF TH  V G   L+F   N +       
Sbjct: 387 ------ADLSERLDRRGWQVPAQLLPKGLAIVFGTH--VTGRQGLKFIVANLLI-TDREE 437

Query: 490 AAWTVVQEH 498
           +   +++E 
Sbjct: 438 SLLALIEEP 446

Length = 460

>gnl|CDD|163511 TIGR03799, NOD_PanD_pyr, putative pyridoxal-dependent aspartate 1-decarboxylase

 Score = 89.0 bits (221), Expect = 7e-19
 Identities = 86/328 (26%), Positives = 153/328 (46%), Gaps = 46/328 (14%)

Query: 34  SQVEPGYLKKRLPESAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYFPATS------ 87
           S++E  +    +PE   +  E  + +L  +  H V    H  SP++  +   TS      
Sbjct: 51  SEIEKDFSSAEIPEQPTFVSEHTQFLLDKLVAHSV----HTASPSFIGHM--TSALPYFM 104

Query: 88  -SVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWL-----GQMLDLPKSFLFSGNG 141
             ++ +   M++   N+V ++  +S A   LE  V+  +     GQ  D  + ++ S + 
Sbjct: 105 LPLSKL---MVALNQNLVKIE--TSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADH 159

Query: 142 --GGVIQGTTCEALLCTLTAARDRVLKK------IGRENI---------SKLVVYSSDQT 184
             G    G T  A +  L  AR+R+LK       + RE +           L +  S++ 
Sbjct: 160 SLGAFCSGGTV-ANITALWVARNRLLKADGDFKGVAREGLFAALKHYGYDGLAILVSERG 218

Query: 185 HCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELI-PLFLCATVGT 243
           H +  KAA ++GI R N+ AIKT  ++   + A   L     ++  + I PL +    GT
Sbjct: 219 HYSLGKAADVLGIGRDNLIAIKTDANNRIDVDA---LRDKCAELAEQNIKPLAIVGVAGT 275

Query: 244 TAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWL 303
           T    +DPL  + D+A++ G   HVDAA+ G+  +   +RH + G+E  DS + + HK L
Sbjct: 276 TETGNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQL 335

Query: 304 FTTLDCCCLWVKDPSCLLSTLSTNPQYL 331
           +  +    +  KDP+ L+S +  + +Y+
Sbjct: 336 YVPMGAGMVLFKDPA-LMSAIEHHAEYI 362

This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent) [Biosynthesis of cofactors, prosthetic groups, and carriers, Pantothenate and coenzyme A]. Length = 522

>gnl|CDD|237409 PRK13520, PRK13520, L-tyrosine decarboxylase; Provisional

 Score = 76.8 bits (190), Expect = 3e-15
 Identities = 65/230 (28%), Positives = 106/230 (46%), Gaps = 33/230 (14%)

Query: 112 PAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRE 171
           P   +LE   ++ LG++L LP ++      G +  G T EA +  + AAR+  L K  + 
Sbjct: 55  PGTAKLEEEAVEMLGELLHLPDAY------GYITSGGT-EANIQAVRAARN--LAKAEKP 105

Query: 172 NISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAE 231
           NI   VV  S   H +F KAA ++G+    +R         Y +  ++V   I+ +    
Sbjct: 106 NI---VVPES--AHFSFDKAADMLGV---ELRRAPLDDD--YRVDVKAVEDLIDDNTIG- 154

Query: 232 LIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFID---G 288
                +    GTT +  VDP+  L  +A + GI++HVDAA+ G   + P      +    
Sbjct: 155 -----IVGIAGTTELGQVDPIPELSKIALENGIFLHVDAAFGG--FVIPFLDDPPNFDFS 207

Query: 289 VECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYL--KNEAT 336
           +  VDS + +PHK     +    +  +D S  L  L+ +  YL  K +AT
Sbjct: 208 LPGVDSITIDPHKMGLAPIPAGGILFRDES-YLDALAVDTPYLTSKKQAT 256

Length = 371

>gnl|CDD|234361 TIGR03812, tyr_de_CO2_Arch, tyrosine decarboxylase MnfA

 Score = 76.2 bits (188), Expect = 6e-15
 Identities = 57/231 (24%), Positives = 104/231 (45%), Gaps = 30/231 (12%)

Query: 112 PAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRE 171
           P   ++E  V+  LG +L LP ++      G ++ G T EA +  + AA++  L +  + 
Sbjct: 55  PGTKKIEEEVVGSLGNLLHLPDAY------GYIVSGGT-EANIQAVRAAKN--LAREEKR 105

Query: 172 NISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAE 231
               ++V  S   H +F+KAA+++G+    +R     +   Y +  + V   I+ +    
Sbjct: 106 T-PNIIVPES--AHFSFEKAAEMLGL---ELRYAPLDED--YTVDVKDVEDLIDDNTIG- 156

Query: 232 LIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGS----ACICPEFRHFID 287
                +    GTT +  +D ++ L  +A + GI++HVDAA+ G              F  
Sbjct: 157 -----IVGIAGTTELGQIDDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDF 211

Query: 288 GVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYL--KNEAT 336
            +  V S + +PHK   + +    +  +  S  L  LS +  YL  K +AT
Sbjct: 212 SLPGVQSITIDPHKMGLSPIPAGGILFRSKS-YLKYLSVDAPYLTVKKQAT 261

Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions [Biosynthesis of cofactors, prosthetic groups, and carriers, Other]. Length = 373

>gnl|CDD|99742 cd01494, AAT_I, Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes

 Score = 55.1 bits (133), Expect = 6e-09
 Identities = 40/174 (22%), Positives = 58/174 (33%), Gaps = 27/174 (15%)

Query: 133 KSFLFSGNGGGVIQ-GTTC--EALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ 189
              L  GN   V     T   EA L  L    D               V      H    
Sbjct: 10  ARLLQPGNDKAVFVPSGTGANEAALLALLGPGD--------------EVIVDANGH--GS 53

Query: 190 KAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249
           +      +       +    +   GL        I  +++A+     +  T  TT+   +
Sbjct: 54  RYWVAAELAGAKPVPVPVDDAGYGGLDV-----AILEELKAKPNVALIVITPNTTSGGVL 108

Query: 250 DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWL 303
            PLK +  +AK++GI + VDAA AG A   P       G    D  +F+ HK L
Sbjct: 109 VPLKEIRKIAKEYGILLLVDAASAGGASPAPGVLIPEGG---ADVVTFSLHKNL 159

PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), and D-amino acid superfamily (fold type IV) and Glycogen phophorylase family (fold type V). Length = 170

>gnl|CDD|235068 PRK02769, PRK02769, histidine decarboxylase; Provisional

 Score = 52.0 bits (125), Expect = 4e-07
 Identities = 76/326 (23%), Positives = 126/326 (38%), Gaps = 84/326 (25%)

Query: 94  GEMLSSGFNVVGLDWISSP----AAVELENIVMDWLGQMLDLP--KSFLFSGNGGGVIQG 147
               S   N  G D  S       + + E  VM++  ++  +P  +S+ +  NGG     
Sbjct: 40  KRFFSFSINNCG-DPYSKSNYPLNSFDFERDVMNFFAELFKIPFNESWGYITNGG----- 93

Query: 148 TTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKT 207
              E  L     AR         E      +Y S  TH +  K A+++ I  + I     
Sbjct: 94  --TEGNLYGCYLAR---------ELFPDGTLYYSKDTHYSVSKIARLLRIKSRVIT---- 138

Query: 208 TKSSSYGLSAESVLSQINLDVEAELI------PLFLCATVGTTAITAVDPLKPLCDVAKQ 261
             S   G        +I+ D     I      P  + A +GTT   A+D +K + ++ K+
Sbjct: 139 --SLPNG--------EIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDNIKEIQEILKK 188

Query: 262 FGI---WVHVDAAYAGSACICPEFRH-----FIDGVECVDSFSFNPHKWLFTTLDCC--- 310
            GI   ++H DAA +G   I P   +     F DG   +DS + + HK++ + + C    
Sbjct: 189 IGIDDYYIHADAALSGM--ILPFVNNPPPFSFADG---IDSIAISGHKFIGSPMPCGIVL 243

Query: 311 --CLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRR-FRSLKLWVVI 367
               +V         +S +  Y              +G +D  I+  R    +L LW  I
Sbjct: 244 AKKKYV-------ERISVDVDY--------------IGSRDQTISGSRNGHTALLLWAAI 282

Query: 368 RNFGVANLRNFIRSHVGMAK-LFERL 392
           R+ G   LR  ++  + MA+   +RL
Sbjct: 283 RSLGSKGLRQRVQHCLDMAQYAVDRL 308

Length = 380

>gnl|CDD|163523 TIGR03811, tyr_de_CO2_Ent, tyrosine decarboxylase, Enterococcus type

 Score = 44.8 bits (106), Expect = 9e-05
 Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 10/115 (8%)

Query: 169 GRENISKLVVYSSDQT-HCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLD 227
             +++ KL  +   QT H ++ KAA I+GI    +  +     S+Y +    +   I   
Sbjct: 215 SGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVIPVPV--DSNYRMDINELEKIIR-K 271

Query: 228 VEAELIP-LFLCATVGTTAITAVDPLKPLCDVAKQF---GIW--VHVDAAYAGSA 276
           + AE  P L +   VG+T   AVD +  +  +  +    GI+  +HVDAAY G  
Sbjct: 272 LAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGGYG 326

This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis [Cellular processes, Adaptations to atypical conditions]. Length = 608

>gnl|CDD|223594 COG0520, csdA, Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]

 Score = 40.4 bits (95), Expect = 0.002
 Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 14/77 (18%)

Query: 251 PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF-IDGVEC--VDSFSFNPHKWLFTTL 307
           P+K + ++A + G  V VDAA A          H  ID V+    D  +F+ HKWL    
Sbjct: 180 PVKEIAELAHEHGALVLVDAAQA--------AGHLPID-VQELGCDFLAFSGHKWLLGPT 230

Query: 308 DCCCLWVKDPSCLLSTL 324
               L+V+    LL  L
Sbjct: 231 GIGVLYVRKE--LLEEL 245

Length = 405

>gnl|CDD|166673 PLN03032, PLN03032, serine decarboxylase; Provisional

 Score = 39.8 bits (93), Expect = 0.002
 Identities = 36/153 (23%), Positives = 63/153 (41%), Gaps = 25/153 (16%)

Query: 168 IGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLD 227
           +GRE     ++Y+S ++H +  KAA++  ++   +  +          S E     I+ D
Sbjct: 104 VGREVFPDGILYASRESHYSVFKAARMYRMEAVKVPTL---------PSGE-----IDYD 149

Query: 228 -VEAELI-----PLFLCATVGTTAITAVDPLKPLCDVAKQFGI-----WVHVDAAYAGSA 276
            +E  L      P  L   +GTT   AVD L  +  + K+ G      ++H D A  G  
Sbjct: 150 DLERALAKNRDKPAILNVNIGTTVKGAVDDLDRILRILKELGYTEDRFYIHCDGALFGLM 209

Query: 277 CICPEFRHFIDGVECVDSFSFNPHKWLFTTLDC 309
                    +   + + S S + HK+L   + C
Sbjct: 210 MPFVSRAPEVTFRKPIGSVSVSGHKFLGCPMPC 242

Length = 374

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	502
PLN02590	539	probable tyrosine decarboxylase	100.0
PLN02880	490	tyrosine decarboxylase	100.0
KOG0628	511	consensus Aromatic-L-amino-acid/L-histidine decarb	100.0
TIGR03799	522	NOD_PanD_pyr putative pyridoxal-dependent aspartat	100.0
PF00282	373	Pyridoxal_deC: Pyridoxal-dependent decarboxylase c	100.0
KOG0629	510	consensus Glutamate decarboxylase and related prot	100.0
TIGR03811	608	tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcu	100.0
COG0076	460	GadB Glutamate decarboxylase and related PLP-depen	100.0
PLN02263	470	serine decarboxylase	100.0
TIGR01788	431	Glu-decarb-GAD glutamate decarboxylase. This model	100.0
PLN03032	374	serine decarboxylase; Provisional	100.0
PRK02769	380	histidine decarboxylase; Provisional	100.0
cd06450	345	DOPA_deC_like DOPA decarboxylase family. This fami	100.0
PRK13520	371	L-tyrosine decarboxylase; Provisional	100.0
TIGR03812	373	tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Membe	100.0
COG0520	405	csdA Selenocysteine lyase/Cysteine desulfurase [Po	100.0
KOG1383	491	consensus Glutamate decarboxylase/sphingosine phos	100.0
COG1104	386	NifS Cysteine sulfinate desulfinase/cysteine desul	100.0
PRK04366	481	glycine dehydrogenase subunit 2; Validated	100.0
TIGR00461	939	gcvP glycine dehydrogenase (decarboxylating). This	100.0
PRK05367	954	glycine dehydrogenase; Provisional	99.97
TIGR01977	376	am_tr_V_EF2568 cysteine desulfurase family protein	99.97
PRK09295	406	bifunctional cysteine desulfurase/selenocysteine l	99.97
TIGR03402	379	FeS_nifS cysteine desulfurase NifS. Members of thi	99.97
PRK00451	447	glycine dehydrogenase subunit 1; Validated	99.97
PRK10874	401	cysteine sulfinate desulfinase; Provisional	99.97
TIGR01979	403	sufS cysteine desulfurases, SufS subfamily. This m	99.97
TIGR03392	398	FeS_syn_CsdA cysteine desulfurase, catalytic subun	99.97
cd06453	373	SufS_like Cysteine desulfurase (SufS)-like. This f	99.97
PLN02651	364	cysteine desulfurase	99.97
TIGR03531	444	selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium tr	99.97
TIGR02006	402	IscS cysteine desulfurase IscS. This model represe	99.97
cd06451	356	AGAT_like Alanine-glyoxylate aminotransferase (AGA	99.96
PLN02855	424	Bifunctional selenocysteine lyase/cysteine desulfu	99.96
PF00266	371	Aminotran_5: Aminotransferase class-V; InterPro: I	99.96
TIGR03403	382	nifS_epsilon cysteine desulfurase, NifS family, ep	99.96
PRK09331	387	Sep-tRNA:Cys-tRNA synthetase; Provisional	99.96
PLN02409	401	serine--glyoxylate aminotransaminase	99.96
cd00613	398	GDC-P Glycine cleavage system P-protein, alpha- an	99.96
TIGR01814	406	kynureninase kynureninase. This model describes ky	99.96
PRK02948	381	cysteine desulfurase; Provisional	99.95
TIGR01976	397	am_tr_V_VC1184 cysteine desulfurase family protein	99.95
PRK14012	404	cysteine desulfurase; Provisional	99.95
cd06452	361	SepCysS Sep-tRNA:Cys-tRNA synthase. This family be	99.95
KOG1549	428	consensus Cysteine desulfurase NFS1 [Amino acid tr	99.94
TIGR02326	363	transamin_PhnW 2-aminoethylphosphonate--pyruvate t	99.94
COG0075	383	Serine-pyruvate aminotransferase/archaeal aspartat	99.94
PLN02414	993	glycine dehydrogenase (decarboxylating)	99.94
TIGR02539	370	SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation	99.94
TIGR03301	355	PhnW-AepZ 2-aminoethylphosphonate aminotransferase	99.93
TIGR03235	353	DNA_S_dndA cysteine desulfurase DndA. This model d	99.93
PRK12566	954	glycine dehydrogenase; Provisional	99.93
COG0436	393	Aspartate/tyrosine/aromatic aminotransferase [Amin	99.93
PRK13479	368	2-aminoethylphosphonate--pyruvate transaminase; Pr	99.93
PLN02724	805	Molybdenum cofactor sulfurase	99.92
PTZ00094	452	serine hydroxymethyltransferase; Provisional	99.92
COG0156	388	BioF 7-keto-8-aminopelargonate synthetase and rela	99.92
PRK03080	378	phosphoserine aminotransferase; Provisional	99.91
PLN02721	353	threonine aldolase	99.91
TIGR01822	393	2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A lig	99.91
cd00609	350	AAT_like Aspartate aminotransferase family. This f	99.91
COG2008	342	GLY1 Threonine aldolase [Amino acid transport and	99.91
cd06502	338	TA_like Low-specificity threonine aldolase (TA). T	99.91
PRK07179	407	hypothetical protein; Provisional	99.91
PRK06108	382	aspartate aminotransferase; Provisional	99.9
cd06454	349	KBL_like KBL_like; this family belongs to the pyri	99.9
PRK08361	391	aspartate aminotransferase; Provisional	99.9
PRK05764	393	aspartate aminotransferase; Provisional	99.9
cd00611	355	PSAT_like Phosphoserine aminotransferase (PSAT) fa	99.89
PLN02483	489	serine palmitoyltransferase	99.89
TIGR01437	363	selA_rel uncharacterized pyridoxal phosphate-depen	99.89
PRK07324	373	transaminase; Validated	99.88
PRK13580	493	serine hydroxymethyltransferase; Provisional	99.88
PLN00145	430	tyrosine/nicotianamine aminotransferase; Provision	99.88
PRK06207	405	aspartate aminotransferase; Provisional	99.88
PLN02656	409	tyrosine transaminase	99.88
PRK07682	378	hypothetical protein; Validated	99.88
PLN00175	413	aminotransferase family protein; Provisional	99.88
PLN02822	481	serine palmitoyltransferase	99.88
PLN02187	462	rooty/superroot1	99.88
PTZ00433	412	tyrosine aminotransferase; Provisional	99.88
COG1168	388	MalY Bifunctional PLP-dependent enzyme with beta-c	99.88
cd00378	402	SHMT Serine-glycine hydroxymethyltransferase (SHMT	99.88
PTZ00377	481	alanine aminotransferase; Provisional	99.88
PRK05355	360	3-phosphoserine/phosphohydroxythreonine aminotrans	99.88
PRK05937	370	8-amino-7-oxononanoate synthase; Provisional	99.88
PRK06939	397	2-amino-3-ketobutyrate coenzyme A ligase; Provisio	99.87
cd00616	352	AHBA_syn 3-amino-5-hydroxybenzoic acid synthase fa	99.87
TIGR01265	403	tyr_nico_aTase tyrosine/nicotianamine aminotransfe	99.87
COG1103	382	Archaea-specific pyridoxal phosphate-dependent enz	99.87
PRK13355	517	bifunctional HTH-domain containing protein/aminotr	99.87
KOG2862	385	consensus Alanine-glyoxylate aminotransferase AGT1	99.87
PRK00011	416	glyA serine hydroxymethyltransferase; Reviewed	99.86
PRK05958	385	8-amino-7-oxononanoate synthase; Reviewed	99.86
PRK13034	416	serine hydroxymethyltransferase; Reviewed	99.86
TIGR01821	402	5aminolev_synth 5-aminolevulinic acid synthase. Th	99.86
PLN02231	534	alanine transaminase	99.86
PLN03226	475	serine hydroxymethyltransferase; Provisional	99.86
PRK05957	389	aspartate aminotransferase; Provisional	99.86
PLN00143	409	tyrosine/nicotianamine aminotransferase; Provision	99.86
PRK08363	398	alanine aminotransferase; Validated	99.86
PRK06290	410	aspartate aminotransferase; Provisional	99.86
TIGR01364	349	serC_1 phosphoserine aminotransferase. This model	99.86
PRK08960	387	hypothetical protein; Provisional	99.86
KOG1368	384	consensus Threonine aldolase [Amino acid transport	99.86
PLN02414	993	glycine dehydrogenase (decarboxylating)	99.86
TIGR01366	361	serC_3 phosphoserine aminotransferase, putative. T	99.86
TIGR03537	350	DapC succinyldiaminopimelate transaminase. Note: t	99.86
PRK13392	410	5-aminolevulinate synthase; Provisional	99.86
PRK07681	399	aspartate aminotransferase; Provisional	99.86
PRK07777	387	aminotransferase; Validated	99.86
PRK05367	954	glycine dehydrogenase; Provisional	99.86
PRK08912	387	hypothetical protein; Provisional	99.85
cd00615	294	Orn_deC_like Ornithine decarboxylase family. This	99.85
PRK09082	386	methionine aminotransferase; Validated	99.85
PRK07309	391	aromatic amino acid aminotransferase; Validated	99.85
PRK12414	384	putative aminotransferase; Provisional	99.85
TIGR01264	401	tyr_amTase_E tyrosine aminotransferase, eukaryotic	99.85
PRK06225	380	aspartate aminotransferase; Provisional	99.85
PRK07337	388	aminotransferase; Validated	99.85
TIGR01141	346	hisC histidinol-phosphate aminotransferase. Histid	99.85
PLN02955	476	8-amino-7-oxononanoate synthase	99.85
PRK09064	407	5-aminolevulinate synthase; Validated	99.85
PLN02376	496	1-aminocyclopropane-1-carboxylate synthase	99.85
PRK06348	384	aspartate aminotransferase; Provisional	99.85
PRK05942	394	aspartate aminotransferase; Provisional	99.85
TIGR03540	383	DapC_direct LL-diaminopimelate aminotransferase. T	99.84
PF00155	363	Aminotran_1_2: Aminotransferase class I and II 1-a	99.84
PRK07568	397	aspartate aminotransferase; Provisional	99.84
PRK06107	402	aspartate aminotransferase; Provisional	99.84
TIGR01825	385	gly_Cac_T_rel pyridoxal phosphate-dependent acyltr	99.84
PRK07550	386	hypothetical protein; Provisional	99.84
PRK08068	389	transaminase; Reviewed	99.84
PRK13393	406	5-aminolevulinate synthase; Provisional	99.84
PRK13238	460	tnaA tryptophanase/L-cysteine desulfhydrase, PLP-d	99.84
PLN03227	392	serine palmitoyltransferase-like protein; Provisio	99.84
TIGR00858	360	bioF 8-amino-7-oxononanoate synthase. This model r	99.84
PRK09265	404	aminotransferase AlaT; Validated	99.83
PRK14807	351	histidinol-phosphate aminotransferase; Provisional	99.83
PRK08056	356	threonine-phosphate decarboxylase; Provisional	99.83
PRK05387	353	histidinol-phosphate aminotransferase; Provisional	99.83
PRK09276	385	LL-diaminopimelate aminotransferase; Provisional	99.83
PRK06836	394	aspartate aminotransferase; Provisional	99.83
KOG0259	447	consensus Tyrosine aminotransferase [Amino acid tr	99.83
PLN02450	468	1-aminocyclopropane-1-carboxylate synthase	99.83
PRK06855	433	aminotransferase; Validated	99.83
PRK07366	388	succinyldiaminopimelate transaminase; Validated	99.82
PRK09147	396	succinyldiaminopimelate transaminase; Provisional	99.82
PRK08636	403	aspartate aminotransferase; Provisional	99.82
PRK07683	387	aminotransferase A; Validated	99.82
PRK11658	379	UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate amin	99.82
PRK00950	361	histidinol-phosphate aminotransferase; Validated	99.82
PRK06358	354	threonine-phosphate decarboxylase; Provisional	99.82
COG0399	374	WecE Predicted pyridoxal phosphate-dependent enzym	99.82
KOG0257	420	consensus Kynurenine aminotransferase, glutamine t	99.81
cd00614	369	CGS_like CGS_like: Cystathionine gamma-synthase is	99.81
PF01276	417	OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain;	99.81
PLN02607	447	1-aminocyclopropane-1-carboxylate synthase	99.81
COG1003	496	GcvP Glycine cleavage system protein P (pyridoxal-	99.81
PRK10534	333	L-threonine aldolase; Provisional	99.81
TIGR01328	391	met_gam_lyase methionine gamma-lyase. This model d	99.81
PRK04870	356	histidinol-phosphate aminotransferase; Provisional	99.81
PRK02731	367	histidinol-phosphate aminotransferase; Validated	99.81
TIGR03588	380	PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-amin	99.81
PRK05968	389	hypothetical protein; Provisional	99.81
PRK03158	359	histidinol-phosphate aminotransferase; Provisional	99.8
PRK15029	755	arginine decarboxylase; Provisional	99.8
PRK06767	386	methionine gamma-lyase; Provisional	99.8
PRK15481	431	transcriptional regulatory protein PtsJ; Provision	99.8
PRK01688	351	histidinol-phosphate aminotransferase; Provisional	99.8
PRK07504	398	O-succinylhomoserine sulfhydrylase; Reviewed	99.8
PRK08133	390	O-succinylhomoserine sulfhydrylase; Validated	99.8
PRK08134	433	O-acetylhomoserine aminocarboxypropyltransferase;	99.8
PRK05166	371	histidinol-phosphate aminotransferase; Provisional	99.8
TIGR03538	393	DapC_gpp succinyldiaminopimelate transaminase. Thi	99.79
PLN03026	380	histidinol-phosphate aminotransferase; Provisional	99.79
PLN02271	586	serine hydroxymethyltransferase	99.79
PRK03317	368	histidinol-phosphate aminotransferase; Provisional	99.79
PLN02509	464	cystathionine beta-lyase	99.79
PLN02242	418	methionine gamma-lyase	99.79
PRK09148	405	aminotransferase; Validated	99.79
PRK08175	395	aminotransferase; Validated	99.79
TIGR03576	346	pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158	99.79
cd00617	431	Tnase_like Tryptophanase family (Tnase). This fami	99.79
PRK07908	349	hypothetical protein; Provisional	99.79
PRK07811	388	cystathionine gamma-synthase; Provisional	99.78
PRK04635	354	histidinol-phosphate aminotransferase; Provisional	99.78
PRK09105	370	putative aminotransferase; Provisional	99.78
TIGR01324	377	cysta_beta_ly_B cystathionine beta-lyase, bacteria	99.78
PRK08861	388	cystathionine gamma-synthase; Provisional	99.78
PRK08114	395	cystathionine beta-lyase; Provisional	99.78
PLN02672	1082	methionine S-methyltransferase	99.78
PRK05613	437	O-acetylhomoserine aminocarboxypropyltransferase;	99.78
PRK09028	394	cystathionine beta-lyase; Provisional	99.78
TIGR01329	378	cysta_beta_ly_E cystathionine beta-lyase, eukaryot	99.78
PRK08776	405	cystathionine gamma-synthase; Provisional	99.78
PLN02368	407	alanine transaminase	99.78
PRK08248	431	O-acetylhomoserine aminocarboxypropyltransferase;	99.77
PRK07050	394	cystathionine beta-lyase; Provisional	99.77
PRK07812	436	O-acetylhomoserine aminocarboxypropyltransferase;	99.77
PRK08064	390	cystathionine beta-lyase; Provisional	99.77
PF02347	429	GDC-P: Glycine cleavage system P-protein; InterPro	99.77
PRK02610	374	histidinol-phosphate aminotransferase; Provisional	99.77
PRK08247	366	cystathionine gamma-synthase; Reviewed	99.77
PRK08574	385	cystathionine gamma-synthase; Provisional	99.77
PRK08249	398	cystathionine gamma-synthase; Provisional	99.76
PRK08045	386	cystathionine gamma-synthase; Provisional	99.76
PRK06234	400	methionine gamma-lyase; Provisional	99.76
TIGR01365	374	serC_2 phosphoserine aminotransferase, Methanosarc	99.76
PRK04781	364	histidinol-phosphate aminotransferase; Provisional	99.76
KOG1359	417	consensus Glycine C-acetyltransferase/2-amino-3-ke	99.76
TIGR01325	380	O_suc_HS_sulf O-succinylhomoserine sulfhydrylase.	99.76
PRK01533	366	histidinol-phosphate aminotransferase; Validated	99.76
PRK07810	403	O-succinylhomoserine sulfhydrylase; Provisional	99.76
PLN02452	365	phosphoserine transaminase	99.76
PRK08153	369	histidinol-phosphate aminotransferase; Provisional	99.76
PRK07269	364	cystathionine gamma-synthase; Reviewed	99.75
PRK07590	409	L,L-diaminopimelate aminotransferase; Validated	99.75
TIGR00461	939	gcvP glycine dehydrogenase (decarboxylating). This	99.75
TIGR01140	330	L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxy	99.75
cd00610	413	OAT_like Acetyl ornithine aminotransferase family.	99.75
PRK07503	403	methionine gamma-lyase; Provisional	99.75
PRK06084	425	O-acetylhomoserine aminocarboxypropyltransferase;	99.75
TIGR02080	382	O_succ_thio_ly O-succinylhomoserine (thiol)-lyase.	99.74
PRK06425	332	histidinol-phosphate aminotransferase; Validated	99.74
PRK03321	352	putative aminotransferase; Provisional	99.74
PRK05994	427	O-acetylhomoserine aminocarboxypropyltransferase;	99.74
PTZ00376	404	aspartate aminotransferase; Provisional	99.74
PRK15400	714	lysine decarboxylase CadA; Provisional	99.74
PRK07865	364	N-succinyldiaminopimelate aminotransferase; Review	99.74
PRK15399	713	lysine decarboxylase LdcC; Provisional	99.74
PRK13578	720	ornithine decarboxylase; Provisional	99.74
PF01041	363	DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransfe	99.73
PRK03244	398	argD acetylornithine aminotransferase; Provisional	99.73
cd01494	170	AAT_I Aspartate aminotransferase (AAT) superfamily	99.73
TIGR03539	357	DapC_actino succinyldiaminopimelate transaminase.	99.73
PRK09275	527	aspartate aminotransferase; Provisional	99.73
PRK00854	401	rocD ornithine--oxo-acid transaminase; Reviewed	99.73
PRK07671	377	cystathionine beta-lyase; Provisional	99.73
PF01212	290	Beta_elim_lyase: Beta-eliminating lyase; InterPro:	99.73
PRK09257	396	aromatic amino acid aminotransferase; Provisional	99.73
PRK05939	397	hypothetical protein; Provisional	99.73
PRK11706	375	TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisio	99.73
PRK06176	380	cystathionine gamma-synthase/cystathionine beta-ly	99.72
KOG0256	471	consensus 1-aminocyclopropane-1-carboxylate syntha	99.72
PRK14809	357	histidinol-phosphate aminotransferase; Provisional	99.72
PRK06460	376	hypothetical protein; Provisional	99.72
TIGR02379	376	ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase	99.72
COG1167	459	ARO8 Transcriptional regulators containing a DNA-b	99.72
KOG1360	570	consensus 5-aminolevulinate synthase [Coenzyme tra	99.72
PRK05839	374	hypothetical protein; Provisional	99.72
PRK07582	366	cystathionine gamma-lyase; Validated	99.71
PRK04073	396	rocD ornithine--oxo-acid transaminase; Provisional	99.71
PRK15407	438	lipopolysaccharide biosynthesis protein RfbH; Prov	99.71
PRK05967	395	cystathionine beta-lyase; Provisional	99.71
PRK07392	360	threonine-phosphate decarboxylase; Validated	99.71
TIGR03801	521	asp_4_decarbox aspartate 4-decarboxylase. This enz	99.71
PRK04311	464	selenocysteine synthase; Provisional	99.7
TIGR03246	397	arg_catab_astC succinylornithine transaminase fami	99.7
PRK08637	388	hypothetical protein; Provisional	99.7
PTZ00125	400	ornithine aminotransferase-like protein; Provision	99.69
COG0403	450	GcvP Glycine cleavage system protein P (pyridoxal-	99.69
TIGR01326	418	OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model d	99.69
PRK07505	402	hypothetical protein; Provisional	99.69
PRK06702	432	O-acetylhomoserine aminocarboxypropyltransferase;	99.69
PRK06434	384	cystathionine gamma-lyase; Validated	99.68
TIGR00474	454	selA seryl-tRNA(sec) selenium transferase. In bact	99.68
PLN02397	423	aspartate transaminase	99.68
PRK03967	337	histidinol-phosphate aminotransferase; Provisional	99.67
TIGR02618	450	tyr_phenol_ly tyrosine phenol-lyase. This model de	99.67
PRK14808	335	histidinol-phosphate aminotransferase; Provisional	99.67
TIGR00707	379	argD acetylornithine and succinylornithine aminotr	99.67
COG2873	426	MET17 O-acetylhomoserine sulfhydrylase [Amino acid	99.67
COG3844	407	Kynureninase [Amino acid transport and metabolism]	99.67
PF00464	399	SHMT: Serine hydroxymethyltransferase; InterPro: I	99.66
PRK09440	416	avtA valine--pyruvate transaminase; Provisional	99.66
PRK01278	389	argD acetylornithine transaminase protein; Provisi	99.66
TIGR01885	401	Orn_aminotrans ornithine aminotransferase. This mo	99.66
PRK12462	364	phosphoserine aminotransferase; Provisional	99.66
COG0079	356	HisC Histidinol-phosphate/aromatic aminotransferas	99.65
PRK08354	311	putative aminotransferase; Provisional	99.65
PF01053	386	Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent	99.64
PRK02936	377	argD acetylornithine aminotransferase; Provisional	99.64
PRK05093	403	argD bifunctional N-succinyldiaminopimelate-aminot	99.63
TIGR03542	402	DAPAT_plant LL-diaminopimelate aminotransferase. T	99.63
PRK02627	396	acetylornithine aminotransferase; Provisional	99.63
PRK13237	460	tyrosine phenol-lyase; Provisional	99.62
KOG1357	519	consensus Serine palmitoyltransferase [Posttransla	99.62
PLN02624	474	ornithine-delta-aminotransferase	99.61
COG0112	413	GlyA Glycine/serine hydroxymethyltransferase [Amin	99.61
PRK03715	395	argD acetylornithine transaminase protein; Provisi	99.61
PRK07049	427	methionine gamma-lyase; Validated	99.6
PRK05664	330	threonine-phosphate decarboxylase; Reviewed	99.59
PRK12381	406	bifunctional succinylornithine transaminase/acetyl	99.59
PRK06959	339	putative threonine-phosphate decarboxylase; Provis	99.58
KOG0630	838	consensus Predicted pyridoxal-dependent decarboxyl	99.57
PRK05964	423	adenosylmethionine--8-amino-7-oxononanoate transam	99.57
PRK11522	459	putrescine--2-oxoglutarate aminotransferase; Provi	99.56
PF05889	389	SLA_LP_auto_ag: Soluble liver antigen/liver pancre	99.54
PRK04260	375	acetylornithine aminotransferase; Provisional	99.54
PRK12566	954	glycine dehydrogenase; Provisional	99.53
KOG0634	472	consensus Aromatic amino acid aminotransferase and	99.53
TIGR03372	442	putres_am_tran putrescine aminotransferase. Member	99.51
PLN02760	504	4-aminobutyrate:pyruvate transaminase	99.5
PRK09264	425	diaminobutyrate--2-oxoglutarate aminotransferase;	99.49
COG0001	432	HemL Glutamate-1-semialdehyde aminotransferase [Co	99.48
COG0626	396	MetC Cystathionine beta-lyases/cystathionine gamma	99.48
COG0160	447	GabT 4-aminobutyrate aminotransferase and related	99.48
PRK08117	433	4-aminobutyrate aminotransferase; Provisional	99.48
PRK04612	408	argD acetylornithine transaminase protein; Provisi	99.47
COG1982	557	LdcC Arginine/lysine/ornithine decarboxylases [Ami	99.47
TIGR00713	423	hemL glutamate-1-semialdehyde-2,1-aminomutase. Thi	99.46
COG4992	404	ArgD Ornithine/acetylornithine aminotransferase [A	99.46
PRK08088	425	4-aminobutyrate aminotransferase; Validated	99.45
PRK06058	443	4-aminobutyrate aminotransferase; Provisional	99.43
TIGR02407	412	ectoine_ectB diaminobutyrate--2-oxoglutarate amino	99.43
PRK06541	460	hypothetical protein; Provisional	99.43
PRK06777	421	4-aminobutyrate aminotransferase; Provisional	99.42
TIGR00700	420	GABAtrnsam 4-aminobutyrate aminotransferase, proka	99.42
PRK08360	443	4-aminobutyrate aminotransferase; Provisional	99.42
PRK00062	426	glutamate-1-semialdehyde aminotransferase; Provisi	99.41
PRK05769	441	4-aminobutyrate aminotransferase; Provisional	99.41
PRK12403	460	putative aminotransferase; Provisional	99.41
PLN02482	474	glutamate-1-semialdehyde 2,1-aminomutase	99.4
PLN00144	382	acetylornithine transaminase	99.4
PRK09221	445	beta alanine--pyruvate transaminase; Provisional	99.4
KOG2040	1001	consensus Glycine dehydrogenase (decarboxylating)	99.39
PRK12389	428	glutamate-1-semialdehyde aminotransferase; Provisi	99.39
PRK06062	451	hypothetical protein; Provisional	99.38
PRK13360	442	omega amino acid--pyruvate transaminase; Provision	99.38
PRK06105	460	aminotransferase; Provisional	99.37
KOG0258	475	consensus Alanine aminotransferase [Amino acid tra	99.37
KOG0053	409	consensus Cystathionine beta-lyases/cystathionine	99.37
PRK05639	457	4-aminobutyrate aminotransferase; Provisional	99.37
TIGR02617	467	tnaA_trp_ase tryptophanase, leader peptide-associa	99.37
PRK07678	451	aminotransferase; Validated	99.36
PRK08593	445	4-aminobutyrate aminotransferase; Provisional	99.35
PRK07495	425	4-aminobutyrate aminotransferase; Provisional	99.34
PRK05965	459	hypothetical protein; Provisional	99.34
PRK00615	433	glutamate-1-semialdehyde aminotransferase; Provisi	99.34
PRK09792	421	4-aminobutyrate transaminase; Provisional	99.33
PRK06918	451	4-aminobutyrate aminotransferase; Reviewed	99.32
KOG1358	467	consensus Serine palmitoyltransferase [Posttransla	99.31
PRK06943	453	adenosylmethionine--8-amino-7-oxononanoate transam	99.3
PRK07481	449	hypothetical protein; Provisional	99.3
KOG2467	477	consensus Glycine/serine hydroxymethyltransferase	99.3
PRK07036	466	hypothetical protein; Provisional	99.3
PRK07482	461	hypothetical protein; Provisional	99.29
PRK06149	972	hypothetical protein; Provisional	99.29
PRK07480	456	putative aminotransferase; Validated	99.29
TIGR00709	442	dat 2,4-diaminobutyrate 4-transaminases. This fami	99.29
PRK07986	428	adenosylmethionine--8-amino-7-oxononanoate transam	99.28
PRK06082	459	4-aminobutyrate aminotransferase; Provisional	99.27
PRK04013	364	argD acetylornithine/acetyl-lysine aminotransferas	99.27
PRK07030	466	adenosylmethionine--8-amino-7-oxononanoate transam	99.26
TIGR00699	464	GABAtrns_euk 4-aminobutyrate aminotransferase, euk	99.26
PRK06938	464	diaminobutyrate--2-oxoglutarate aminotransferase;	99.25
PRK07046	453	aminotransferase; Validated	99.25
TIGR00508	427	bioA adenosylmethionine-8-amino-7-oxononanoate tra	99.25
PRK08297	443	L-lysine aminotransferase; Provisional	99.24
PRK06148	1013	hypothetical protein; Provisional	99.24
PRK06173	429	adenosylmethionine--8-amino-7-oxononanoate transam	99.24
PRK05630	422	adenosylmethionine--8-amino-7-oxononanoate transam	99.24
PRK06917	447	hypothetical protein; Provisional	99.23
PRK06916	460	adenosylmethionine--8-amino-7-oxononanoate transam	99.22
PRK07483	443	hypothetical protein; Provisional	99.21
PRK08742	472	adenosylmethionine--8-amino-7-oxononanoate transam	99.21
PRK06931	459	diaminobutyrate--2-oxoglutarate aminotransferase;	99.21
TIGR03251	431	LAT_fam L-lysine 6-transaminase. Characterized mem	99.16
PRK06209	431	glutamate-1-semialdehyde 2,1-aminomutase; Provisio	99.15
COG1932	365	SerC Phosphoserine aminotransferase [Coenzyme meta	99.14
COG3977	417	Alanine-alpha-ketoisovalerate (or valine-pyruvate)	99.12
KOG1404	442	consensus Alanine-glyoxylate aminotransferase AGT2	99.07
COG0161	449	BioA Adenosylmethionine-8-amino-7-oxononanoate ami	99.02
KOG0633	375	consensus Histidinol phosphate aminotransferase [A	98.93
KOG1402	427	consensus Ornithine aminotransferase [Amino acid t	98.92
KOG3846	465	consensus L-kynurenine hydrolase [Amino acid trans	98.92
KOG1401	433	consensus Acetylornithine aminotransferase [Amino	98.91
PLN02974	817	adenosylmethionine-8-amino-7-oxononanoate transami	98.87
COG1921	395	SelA Selenocysteine synthase [seryl-tRNASer seleni	98.79
COG1448	396	TyrB Aspartate/tyrosine/aromatic aminotransferase	98.78
PF00202	339	Aminotran_3: Aminotransferase class-III; InterPro:	98.73
PF12897	425	Aminotran_MocR: Alanine-glyoxylate amino-transfera	98.65
COG3033	471	TnaA Tryptophanase [Amino acid transport and metab	98.58
KOG3843	432	consensus Predicted serine hydroxymethyltransferas	98.49
PF03841	367	SelA: L-seryl-tRNA selenium transferase; InterPro:	98.32
PF06838	403	Met_gamma_lyase: Methionine gamma-lyase ; InterPro	98.21
KOG2790	370	consensus Phosphoserine aminotransferase [Coenzyme	98.19
KOG2040	1001	consensus Glycine dehydrogenase (decarboxylating)	97.99
KOG1403	452	consensus Predicted alanine-glyoxylate aminotransf	97.59
KOG1405	484	consensus 4-aminobutyrate aminotransferase [Amino	97.39
KOG1412	410	consensus Aspartate aminotransferase/Glutamic oxal	97.34
PF04864	363	Alliinase_C: Allinase; InterPro: IPR006948 Allicin	96.84
COG4100	416	Cystathionine beta-lyase family protein involved i	96.47
KOG1411	427	consensus Aspartate aminotransferase/Glutamic oxal	95.31
PLN02994	153	1-aminocyclopropane-1-carboxylate synthase	92.73

>PLN02590 probable tyrosine decarboxylase

Probab=100.00  E-value=4.5e-95  Score=751.15  Aligned_cols=478  Identities=56%  Similarity=1.025  Sum_probs=445.3

Q ss_pred             CCccCHHHHHHHHHHHHHHHHHHHHhcCC----CCCCCCCCchhHhhcCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCC
Q 037144            1 MDQAYAQEFRRQGHMFVDFMAEYYKNIDK----YPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQEHIVPGITHWQS   76 (502)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~   76 (502)
                      |.+|++|+||+++++++|++.+|++++.+    +||.+.++|++|+++++..+|++|++++++++++.+.+.|+.++|+|
T Consensus        51 ~~~m~~~~~r~~~~~~~d~i~~~~~~~~~~~~~~pv~~~~~p~~l~~~l~~~~P~~g~~~~~il~~~~~~i~p~~~~~~h  130 (539)
T PLN02590         51 MKPMDSELLREQGHIMVDFIADYYKNLQDSPQDFPVLSQVQPGYLRDMLPDSAPERPESLKELLDDVSKKIMPGITHWQS  130 (539)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCCChHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhccCCcCCC
Confidence            35699999999999999999999999887    79999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHH
Q 037144           77 PNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCT  156 (502)
Q Consensus        77 p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~a  156 (502)
                      |+||||++++++++++++|++.+.+|++...|..+|+++++|+++++|+++++|+|+.+...+.++|+||+|||+||++|
T Consensus       131 P~f~a~~~~~~~~~~~lgd~l~sa~n~~~~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~a  210 (539)
T PLN02590        131 PSYFAYYASSTSVAGFLGEMLNAGLSVVGFTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVV  210 (539)
T ss_pred             CCeeEeccCCCcHHHHHHHHHHHhcccccCCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999865323346899999999999999


Q ss_pred             HHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEE
Q 037144          157 LTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLF  236 (502)
Q Consensus       157 l~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~  236 (502)
                      |.+||++..++.+..+.++.+||+|+++|+|+.|+|+++|+|.++++.||+|..++++||+++|+++|++++++|.+|++
T Consensus       211 l~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~  290 (539)
T PLN02590        211 VLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFF  290 (539)
T ss_pred             HHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEE
Confidence            99999988766666666889999999999999999999999999999999986556899999999999999999999999


Q ss_pred             EEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeC
Q 037144          237 LCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKD  316 (502)
Q Consensus       237 Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~  316 (502)
                      ||+|+|||.+|++|||++|+++|++||+||||||||||+++++|++++++.|+++|||+++|+|||+++|++||++++|+
T Consensus       291 VvaTaGTT~tGaiDpl~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p~~cg~llvr~  370 (539)
T PLN02590        291 ICATVGTTSSAAVDPLVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQTCSPLWVKD  370 (539)
T ss_pred             EEEEeCCCCCcccCCHHHHHHHHHHhCCeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcCcCEEEEEecC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             chhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC
Q 037144          317 PSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD  396 (502)
Q Consensus       317 ~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~  396 (502)
                      +..+.+++...+.|+......   ....+++.+|++++|||++++++|++|+.+|.+|+++++++++++|++|.+.|++.
T Consensus       371 ~~~l~~a~~~~~~YL~~~~~~---~~~~~d~~d~~i~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~  447 (539)
T PLN02590        371 RYSLIDALKTNPEYLEFKVSK---KDTVVNYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQD  447 (539)
T ss_pred             HHHHHHHhhcCHHHhCCcccc---cccCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            988888899999999643221   23457899999999999999999999999999999999999999999999999999


Q ss_pred             CCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEE
Q 037144          397 KRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRF  476 (502)
Q Consensus       397 ~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~  476 (502)
                      |+|+++.+|.+++||||+.|...                    ..+..+++|++|.++|+++|.++++++.++|+.+||+
T Consensus       448 ~~fel~~~~~l~iVcFr~~~~~~--------------------~~~~~~~ln~~l~~~l~~~G~~~vs~t~~~g~~~lR~  507 (539)
T PLN02590        448 PSFEVVTTRYFSLVCFRLAPVDG--------------------DEDQCNERNRELLAAVNSTGKIFISHTALSGKFVLRF  507 (539)
T ss_pred             CCeEEecCCceEEEEEEecCCCC--------------------CHHHHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEE
Confidence            99999999999999999987531                    2234588899999999999999999999999999999


Q ss_pred             EecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          477 AAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       477 ~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      |++|+.|+++||+.+++.|.+.+.+
T Consensus       508 ~i~n~~T~~~dv~~~~~~i~~~a~~  532 (539)
T PLN02590        508 AVGAPLTEEKHVTEAWQIIQKHASK  532 (539)
T ss_pred             EecCCCCCHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999998765

>PLN02880 tyrosine decarboxylase

Probab=100.00  E-value=1.1e-89  Score=712.38  Aligned_cols=478  Identities=58%  Similarity=1.038  Sum_probs=443.6

Q ss_pred             CCccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHhhcCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCccc
Q 037144            1 MDQAYAQEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQEHIVPGITHWQSPNYF   80 (502)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~   80 (502)
                      |..||+++||++++++++++.+|++++.++||.|..+|+++++.++..+|++|.+++++++++.+.+.|+.++|+||+||
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~~~~~p~~l~~~~~~~~p~~~~~~~~~l~~~~~~i~~~~~~~~hP~f~   86 (490)
T PLN02880          7 LRPMDAEQLRECGHRMVDFIADYYKSIENFPVLSQVQPGYLRELLPDSAPNQPETLDQVLDDVQAKILPGVTHWQSPNYF   86 (490)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhccccCCCCCCCCHHHHHHhccccCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCee
Confidence            34599999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHH
Q 037144           81 AYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAA  160 (502)
Q Consensus        81 ~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a  160 (502)
                      ||++++++++++++|++.+.+|+++..|..+|.++++|+++++|+++++|+|+.+...+.++|++|+|||+||++||.+|
T Consensus        87 ~~~~~~~~~~~~lad~l~~~~n~~~~~~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~A  166 (490)
T PLN02880         87 AYYPSNSSVAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAA  166 (490)
T ss_pred             EeccCCCcHHHHHHHHHHHhhccCCcccccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999998654334468999999999999999999


Q ss_pred             HHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEe
Q 037144          161 RDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCAT  240 (502)
Q Consensus       161 ~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t  240 (502)
                      |++..+..+..+.++.+||+|+.+|||+.|+|+++|+|.++++.||+|.+++++||+++|+++|++++++|.+|++||+|
T Consensus       167 R~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvat  246 (490)
T PLN02880        167 RDRVLRKVGKNALEKLVVYASDQTHSALQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCAT  246 (490)
T ss_pred             HHHHHHHhcccccCCeEEEEcCCchHHHHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEe
Confidence            99887766666667889999999999999999999999999999999865578999999999999999999999999999


Q ss_pred             cCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhh
Q 037144          241 VGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCL  320 (502)
Q Consensus       241 ~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l  320 (502)
                      +|||.+|++|||++|+++|++||+|+|||||||+++++++++++.++|+++|||+++|+|||+++|++||++++|++..+
T Consensus       247 aGTT~~GaiDpl~eI~~i~~~~~iwlHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~~~g~llvr~~~~l  326 (490)
T PLN02880        247 VGTTSSTAVDPLLELGKIAKSNGMWFHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTNFDCSLLWVKDRNAL  326 (490)
T ss_pred             cCCCcCcccCcHHHHHHHHHHcCCEEEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcCCCccEEEEEEeCHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999998777


Q ss_pred             hhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 037144          321 LSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFE  400 (502)
Q Consensus       321 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~  400 (502)
                      ...+...+.|+......   ....+++.++++++|||++++++|++++.+|.+|+++++++++++++++.+.|++.|+|+
T Consensus       327 ~~~~~~~~~Yl~~~~~~---~~~~~~~~~~~i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~e  403 (490)
T PLN02880        327 IQSLSTNPEFLKNKASQ---ANSVVDYKDWQIPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFE  403 (490)
T ss_pred             HHHHccCHHHhcCcccc---ccCCCChhccCcCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence            77888888998764322   224578889999999999999999999999999999999999999999999999999999


Q ss_pred             EecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecC
Q 037144          401 VAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGN  480 (502)
Q Consensus       401 l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~  480 (502)
                      ++.++.+++|||++.|...                    ..+..+++|.++.++|+++|.++++++.+.|+.++|+|++|
T Consensus       404 l~~~~~~~iv~Fr~~~~~~--------------------~~~~~~~~n~~l~~~l~~~g~~~v~~t~~~g~~~lR~~~~n  463 (490)
T PLN02880        404 VVTPRIFSLVCFRLVPPKN--------------------NEDNGNKLNHDLLDAVNSSGKIFISHTVLSGKYVLRFAVGA  463 (490)
T ss_pred             EecCCceEEEEEEEeCCCC--------------------ChhhHHHHHHHHHHHHHhCCCEEEEEEEECCEEEEEEEecC
Confidence            9999999999999987431                    23455888999999999999999999999999999999999


Q ss_pred             CCCcHHHHHHHHHHHHHHHHh
Q 037144          481 SMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       481 ~~t~~~di~~~~~~l~~~~~~  501 (502)
                      ++|+++||+++++.|.+++++
T Consensus       464 ~~tt~~di~~~~~~i~~~~~~  484 (490)
T PLN02880        464 PLTEERHVTAAWKVLQDEASK  484 (490)
T ss_pred             CCCCHHHHHHHHHHHHHHHHH
Confidence            999999999999999998765

>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]

Probab=100.00  E-value=1.7e-88  Score=652.73  Aligned_cols=461  Identities=48%  Similarity=0.879  Sum_probs=440.5

Q ss_pred             cCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHhhcCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCcccccC
Q 037144            4 AYAQEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYF   83 (502)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~   83 (502)
                      |+.+|||+.|++|||+|.||+++++++||.|.++|++++.++|...|++|+++++|++|+.+.++||++||+||+|++|+
T Consensus         1 Md~~efR~~gk~mVD~IadY~e~ir~r~v~P~v~PGYl~~llP~~aPe~pE~~~~Il~D~ekiI~PGitHw~hP~fhAyf   80 (511)
T KOG0628|consen    1 MDSEEFREEGKEMVDYIADYLENIRKRRVLPDVKPGYLRDLLPSKAPEKPESWEDILGDLEKIIMPGITHWQHPHFHAYF   80 (511)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCcchhhhhCCCCCCCChhhHHHHHHHHHHHccCCCcccCCCceeeEc
Confidence            78999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCc--CCCCcEEEcCCchHHHHHHHHHHH
Q 037144           84 PATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLF--SGNGGGVIQGTTCEALLCTLTAAR  161 (502)
Q Consensus        84 ~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~--~~~~~g~~t~ggt~a~~~al~~a~  161 (502)
                      +++.++|++++|++...++..++.|.++|+.++||..+++|+++++++|..|..  .+.|+|++++++|++++.++.+||
T Consensus        81 pa~~s~~siladmLs~~i~~vGFtW~ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR  160 (511)
T KOG0628|consen   81 PAGNSYPSILADMLSGGIGCVGFTWASSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAAR  160 (511)
T ss_pred             cCccchHHHHHHHHhcccccccceeecCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999998865  457899999999999999999999


Q ss_pred             HHHHHHhCcc--------CCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCc
Q 037144          162 DRVLKKIGRE--------NISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELI  233 (502)
Q Consensus       162 ~~~~~~~~~~--------~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~  233 (502)
                      ...+.+.+..        -..+.|+|+|+++|.|++|+|.+.|+   +++.+++|.  ++.|+.+.|+++|++|.++|.+
T Consensus       161 ~~~i~~~k~~~p~~~e~~~~~~lV~Y~SDqahssveka~~i~~V---klR~l~td~--n~~mr~~~L~~AIe~D~arGlI  235 (511)
T KOG0628|consen  161 TEKIEEIKSRPPELHESSVLARLVAYCSDQAHSSVEKACLIAGV---KLRALPTDE--NFGMRGDTLRKAIEEDIARGLI  235 (511)
T ss_pred             HHHHHHhhcCCCcccchhhhhhheEEecCcccchHHHhHhhcce---eEEEeeccc--CcCCCHHHHHHHHHHHHhCCCc
Confidence            9887764332        23789999999999999999999999   999999985  7999999999999999999999


Q ss_pred             cEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEE
Q 037144          234 PLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLW  313 (502)
Q Consensus       234 p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~  313 (502)
                      |++|++|.|||.++++|+|++|+.+|+++|+||||||||+|.++.||+++.++.|++.|||+.+++|||+.+-..|+.+|
T Consensus       236 Pf~v~at~GTT~~ca~D~l~elg~Vc~~~glWLHVDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lW  315 (511)
T KOG0628|consen  236 PFFVCATLGTTSSCAFDELEELGPVCREEGLWLHVDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLW  315 (511)
T ss_pred             cEEEEEeecCccccccccHHHhcchhhhcCEEEEeehhhccccccCHHHHHHhhcchhhccccCChhheeEEeeeeecce
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHH
Q 037144          314 VKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLV  393 (502)
Q Consensus       314 ~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l  393 (502)
                      +|+...+.++++.++-||.+...     +...|+..|++..+|||+++++|..+|.+|.+++++.++++.++++.|.+.+
T Consensus       316 vkd~~~~~~~~~vdp~yL~h~~~-----~~~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv  390 (511)
T KOG0628|consen  316 VKDGTKLSRAFNVDPLYLKHAYQ-----GSAPDYRHWQIPLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLV  390 (511)
T ss_pred             eecCceeeeeeecChHhhcchhh-----ccCCCccccccccccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHh
Confidence            99998888899999999988753     3578999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEE
Q 037144          394 TSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYV  473 (502)
Q Consensus       394 ~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~  473 (502)
                      .+.+.||+.++..+++||||..+.                           |+.|++|+++++.+|.+++.+..++|+.+
T Consensus       391 ~~d~~FE~~~~~~lgLvcFRlk~~---------------------------N~~ne~Ll~~in~~g~i~l~~~~l~gk~v  443 (511)
T KOG0628|consen  391 RADPRFEIVNKRILGLVCFRLKGD---------------------------NEINEALLNRLNSSGRIHLVPASLHGKFV  443 (511)
T ss_pred             hcCCcceeecccccceeEEeecCC---------------------------cHHHHHHHHHHHhcCcEEEEEeeecceEE
Confidence            999999999999999999999875                           78899999999999999999999999999


Q ss_pred             EEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          474 LRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       474 lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      ||++++++.|+++||++.++.|.+.+..
T Consensus       444 lRf~V~s~~t~~~di~~a~~~I~~~a~~  471 (511)
T KOG0628|consen  444 LRFAVCSPLTNESDIDEAWKIIFEAADE  471 (511)
T ss_pred             EEEEecCCCCcHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999988765

>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase

Probab=100.00  E-value=4.3e-73  Score=588.74  Aligned_cols=465  Identities=21%  Similarity=0.331  Sum_probs=384.5

Q ss_pred             HHHHHHHHHHHHHHHHHHh--cCCCCCCCCCCchhHhhcCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCcccccCCC
Q 037144            8 EFRRQGHMFVDFMAEYYKN--IDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYFPA   85 (502)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~   85 (502)
                      ++....+++.+.+++|+.+  ....|+.+.+.++..    ...+|++|.+.+++++++.+.++++.++|+||+||||+++
T Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~hP~f~g~~~~   98 (522)
T TIGR03799        23 TLGRIEQKISQNLAGFLQEHIVAIEKPLSEIEKDFS----SAEIPEQPTFVSEHTQFLLDKLVAHSVHTASPSFIGHMTS   98 (522)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhccCCCchhhhhccc----ccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCeEEeccC
Confidence            4555555555555555554  333456555544432    4578999999999999999999999999999999999998


Q ss_pred             C-CCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCC-CCcc----C-cCCCCcEEEcCCchHHHHHHHH
Q 037144           86 T-SSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDL-PKSF----L-FSGNGGGVIQGTTCEALLCTLT  158 (502)
Q Consensus        86 ~-~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~-~~~~----~-~~~~~~g~~t~ggt~a~~~al~  158 (502)
                      + +.....+++ +.+.+|+|...|..||+++++|+++++|++++++. ++.+    . ..+.++|+||+|||+||++||+
T Consensus        99 ~~p~~~~~l~~-l~~~lN~n~~~~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~  177 (522)
T TIGR03799        99 ALPYFMLPLSK-LMVALNQNLVKIETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALW  177 (522)
T ss_pred             CCchHHHHHHH-HHHHhcCCcceeecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHH
Confidence            6 333334666 67789999999999999999999999999999963 2221    1 1123579999999999999999


Q ss_pred             HHHHHHHHHhCc------c---------CCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHH
Q 037144          159 AARDRVLKKIGR------E---------NISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQ  223 (502)
Q Consensus       159 ~a~~~~~~~~~~------~---------~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~  223 (502)
                      +||++.++..+.      +         +.++++||+|+.+|+|+.|+++++|+|..+++.||+|.  +|+||+++|+++
T Consensus       178 ~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~d~--~g~~d~~~L~~~  255 (522)
T TIGR03799       178 VARNRLLKADGDFKGVAREGLFAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKTDA--NNRIDVDALRDK  255 (522)
T ss_pred             HHHHHhccccccccccccccchhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEeCC--CCcCCHHHHHHH
Confidence            999987643211      1         23578999999999999999999999998999999985  579999999999


Q ss_pred             HHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcC
Q 037144          224 INLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWL  303 (502)
Q Consensus       224 i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l  303 (502)
                      |+++.+++.+|++|++++|||.+|++|||++|+++|+++|+|+|||||||++.++++++++++.+++++||+++|+|||+
T Consensus       256 i~~~~~~g~~~~~vvataGtt~tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l  335 (522)
T TIGR03799       256 CAELAEQNIKPLAIVGVAGTTETGNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQL  335 (522)
T ss_pred             HHHHHHCCCCcEEEEEEecCcCCCCcCCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcC
Confidence            99988889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHH
Q 037144          304 FTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHV  383 (502)
Q Consensus       304 ~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~  383 (502)
                      ++|++||++++|++..+ +.+...+.|+...        +..++.++++++||++.++++|++++.+|.+|+++++++..
T Consensus       336 ~~P~g~G~llvr~~~~~-~~~~~~~~Yl~~~--------~~~d~~~~~legsR~~~al~lw~aL~~lG~~G~~~ii~~~~  406 (522)
T TIGR03799       336 YVPMGAGMVLFKDPALM-SAIEHHAEYILRK--------GSKDLGSHTLEGSRPGMAMLVYAGLHIIGRKGYELLIDQSI  406 (522)
T ss_pred             CcCcccEEEEEeCHHHH-HHhccCcchhcCC--------CCCccccceeecCcchHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            99999999999998654 4677778897532        22456788999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEE
Q 037144          384 GMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFM  463 (502)
Q Consensus       384 ~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~  463 (502)
                      +++++|.+.|++.|+|+++.+|.+++|||++.|..+.....    .++.++.  ....+..+++|++|.++++++|.+++
T Consensus       407 ~la~~l~~~L~~~~~~el~~~p~l~iv~Fr~~p~~~~~~l~----~~~~~~~--~~~~~~~~~ln~~i~~~~~~~G~~~v  480 (522)
T TIGR03799       407 EKAKYFADLIQQQPDFELVTEPELCLLTYRYVPEEVQQALA----KADEEQR--EKINELLDRLTKFIQKRQREAGKSFV  480 (522)
T ss_pred             HHHHHHHHHHhhCCCeEEecCCCccEEEEEEeChhhccccc----ccchhhh--hhHHHHHHHHHHHHHHHHHhcCCEEE
Confidence            99999999999999999999999999999998754311000    0000000  01123468899999999999999999


Q ss_pred             EeeeEC-------CEEEEEEEecCCCCcHHHHHHHHHH
Q 037144          464 THAIVG-------GIYVLRFAAGNSMTMESHVRAAWTV  494 (502)
Q Consensus       464 ~~~~~~-------g~~~lR~~~~~~~t~~~di~~~~~~  494 (502)
                      +.+.+.       +..+||++++|+.|+++||+.+++.
T Consensus       481 s~t~l~~~~~~g~~~~~lR~~~~np~tt~~~i~~~l~~  518 (522)
T TIGR03799       481 SRTRLTPAQYDHQPTVVFRVVLANPLTTHEILQDILDE  518 (522)
T ss_pred             EEEEecccccCCCCcEEEEEEecCCCCCHHHHHHHHHH
Confidence            988765       4578999999999999999998864

This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).

>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal)

Probab=100.00  E-value=1.2e-73  Score=573.89  Aligned_cols=370  Identities=38%  Similarity=0.727  Sum_probs=331.2

Q ss_pred             chhHhhcCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCcccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHH
Q 037144           38 PGYLKKRLPESAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVEL  117 (502)
Q Consensus        38 ~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~l  117 (502)
                      |++|++.++..+|++|.++++|++++.+.+.++..+|+||+||+|+++++++++++++++++.+|+|...|..+|.++++
T Consensus         1 P~~l~~~~~~~lp~~~~~~~~vl~~~~~~l~~~~~~~~~P~~~~~~~~~~~~~~i~~~~l~~~~n~n~~~~~~~P~~~~~   80 (373)
T PF00282_consen    1 PGELRARLDEELPEEGESLEEVLKDLREILAPGVTHWHHPRFFGFVPGGPSPASILADLLASALNQNGFTWEASPAATEI   80 (373)
T ss_dssp             TTSSGGGCHCCHHSSHH-HHHHHHHHHHHTHGCS-TTTSTTBESSSHT--CHHHHHHHHHHHHHT-BTTSTTTSHHHHHH
T ss_pred             ChhhhhcCccccccCCCCHHHHHHHHHHHhhccCCCCCChhHhhhccCCccHHHHHHHHHHhhhcccccccccccccccc
Confidence            78899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccC---CCCeEEEeCCCCchhHHHHHHH
Q 037144          118 ENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGREN---ISKLVVYSSDQTHCAFQKAAQI  194 (502)
Q Consensus       118 e~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~---~~~~~v~~s~~~H~s~~~aa~~  194 (502)
                      |+++++|+++++|+|..+...+.++|++|+|||+||++|+++||+++.++.+..+   .++++||+|+.+|||+.|+|++
T Consensus        81 E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~  160 (373)
T PF00282_consen   81 EREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKAARI  160 (373)
T ss_dssp             HHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHHHHH
T ss_pred             hHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHhcce
Confidence            9999999999999996654433468999999999999999999999876654444   4689999999999999999999


Q ss_pred             cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccccc
Q 037144          195 VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAG  274 (502)
Q Consensus       195 ~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~  274 (502)
                      +|+   .++.||+++  +++||+++|+++|.++.++|..|++|++|+|||.+|++|||++|+++|++|++|+||||||||
T Consensus       161 lGl---g~~~I~~~~--~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlHVDaA~gg  235 (373)
T PF00282_consen  161 LGL---GVRKIPTDE--DGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLHVDAAYGG  235 (373)
T ss_dssp             TTS---EEEEE-BBT--TSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEEEEETTGG
T ss_pred             eee---EEEEecCCc--chhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccccceeeeecccccc
Confidence            999   599999986  579999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccC
Q 037144          275 SACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITL  354 (502)
Q Consensus       275 ~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~  354 (502)
                      ..+++|.++++..+++++|||++|+|||+++|++||++++|++..+...+...+.|+......   .....++.++++++
T Consensus       236 ~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~---~~~~~~~~~~tl~~  312 (373)
T PF00282_consen  236 SALLSPEYRHLLFGIERADSITIDPHKWLGVPYGCGVLLVRDKSDLRDAFSINADYLGNDDRE---SDESYDYGDYTLQG  312 (373)
T ss_dssp             GGGGHCTTGGGGTTGGGESEEEEETTTTTS-SSS-EEEEESSGGGHHGGGEEEETCTT-S-SS---S-GGGCEEEGSSSS
T ss_pred             cccccccccccccccccccccccchhhhhcCCccceeEEeecccchHHHhccChhhhcccccc---cccccccccccccc
Confidence            999999999999999999999999999999999999999999998888888889999854422   33556788999999


Q ss_pred             CCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEee
Q 037144          355 CRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVT  415 (502)
Q Consensus       355 sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~  415 (502)
                      ||+++++++|++|+.+|.+|+++++++..+++++|++.|++.++|+++.+|.+++|||+++
T Consensus       313 SR~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~~~~~vcFr~k  373 (373)
T PF00282_consen  313 SRRFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNEPDLNIVCFRYK  373 (373)
T ss_dssp             SGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTTSSSEEEEEES
T ss_pred             cccchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCCCceEEEEEeC
Confidence            9999999999999999999999999999999999999999999999999999999999984

Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....

>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]

Probab=100.00  E-value=3.9e-72  Score=533.47  Aligned_cols=472  Identities=20%  Similarity=0.323  Sum_probs=423.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCC--CCCCCCCCchhHhhcCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCcccccCC
Q 037144            7 QEFRRQGHMFVDFMAEYYKNIDK--YPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYFP   84 (502)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~   84 (502)
                      +..+....++++.+.+|...--+  ..|.+.+.|.+|+..+...+|+++++.++|+++.++.+.. .+...|||||+...
T Consensus        31 ~~te~fl~~v~~~ll~~v~~~~dr~~kv~~fhhP~~L~~l~nlel~~~~esl~qil~~cr~tl~y-~vKTgHprffNQl~  109 (510)
T KOG0629|consen   31 EVTEPFLRAVVDILLDYVKKGFDRSQKVLDFHHPDELKELFNLELRDQPESLAQILEDCRDTLKY-SVKTGHPRFFNQLS  109 (510)
T ss_pred             hhhHhhhHHHHHHHHHhhccCCcccceeecccChHHHHHHhCcccCCChhhHHHHHHHHHHHHHh-hhccCCCcchhhhc
Confidence            44577888999999999665443  4788999999999999999999999999999999987654 46678999999999


Q ss_pred             CCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHH
Q 037144           85 ATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRV  164 (502)
Q Consensus        85 ~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~  164 (502)
                      ++..+.+..+++++++.|.|...|+..|.+.-+|.++...+.++.|++..      ++|+|++||+.||++|+.+||.+.
T Consensus       110 ~glD~~~Lag~wlT~t~Ntn~~TYEiAPvF~lmE~~vl~km~~ivGw~~~------~DgIf~pggsisn~Ya~~~Aryk~  183 (510)
T KOG0629|consen  110 SGLDPIGLAGEWLTSTANTNMFTYEIAPVFVLMEEEVLAKMREIVGWEEG------GDGIFAPGGSISNMYAMNCARYKN  183 (510)
T ss_pred             cCCCHHHHHHHHHHhccCCCCceEEecceEEeehHHHHHHHHHHhCCCCC------CCceecCCchhHHHHHHHHHHhhc
Confidence            99999999999999999999999999999999999999999999999875      379999999999999999999987


Q ss_pred             HHH---hCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEec
Q 037144          165 LKK---IGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATV  241 (502)
Q Consensus       165 ~~~---~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~  241 (502)
                      ++.   .|..+.|..++++|+++|||+.|+|.++|+|.++++.|++++  +|.|++++||+.|.++.++|..|++|.+|+
T Consensus       184 ~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~lg~gtd~c~~v~t~e--~Gkm~~~dLe~kile~k~kg~~Pf~vnaTa  261 (510)
T KOG0629|consen  184 FPEVKTKGMFALPPLILFTSEESHYSIKKAAAFLGLGTDHCIKVKTDE--RGKMIPDDLEKKILEAKAKGGVPFFVNATA  261 (510)
T ss_pred             CchhhhhhhhcCCcEEEEecccchhhHHHHHHHhccCCceeEEecccc--cCccchHHHHHHHHHHHhcCCCCeEEEecC
Confidence            655   355566999999999999999999999999999999999986  679999999999999999999999999999


Q ss_pred             CCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhh
Q 037144          242 GTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLL  321 (502)
Q Consensus       242 gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~  321 (502)
                      |||+.|++|||+.|+++|++|++|+||||||||+.+.+..+|+++.|+++|||+++++||++++|..||.+++|....+.
T Consensus       262 GTTV~GAFDdL~~iadiC~k~~lWmHvDAAwGGglLmS~k~R~kl~Giera~SvtwnpHK~~gaplqCsa~l~r~~gll~  341 (510)
T KOG0629|consen  262 GTTVLGAFDDLNGIADICEKHKLWMHVDAAWGGGLLMSRKHRHKLTGIERANSVTWNPHKLMGAPLQCSAFLTREEGLLQ  341 (510)
T ss_pred             CceeeeccCcHHHHHHHHHhcCEEEEeecccccccccChhhHhhccCccccCceeecHHHhhcCcchhhHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999888


Q ss_pred             hhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 037144          322 STLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEV  401 (502)
Q Consensus       322 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l  401 (502)
                      ++.+.++.|+++....   ..-.+|.++..+||+|+...+++|..|++-|..|+++.++++.++|+||.++|++.+++++
T Consensus       342 ~Cn~~~A~YLFq~dK~---YdvS~DTgdK~iQCGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~  418 (510)
T KOG0629|consen  342 RCNQMSAIYLFQQDKF---YDVSYDTGDKAIQCGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEM  418 (510)
T ss_pred             hhcccchhhhhccCce---eecccccccchhhcCccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhccccee
Confidence            8888999999876533   3456788999999999999999999999999999999999999999999999999999888


Q ss_pred             ecC--CCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC-CEEEEEEEe
Q 037144          402 AFP--RNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG-GIYVLRFAA  478 (502)
Q Consensus       402 ~~~--~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-g~~~lR~~~  478 (502)
                      +..  |+...|||++.|+.++.++..            .+....+..+...+.+++.++|-..+++.... ...++|+.+
T Consensus       419 l~~~~pe~~nv~fw~vp~~lR~~~~~------------~e~~~rL~kVaPkIK~~Mm~~Gt~Mi~YqPl~~~~nffr~v~  486 (510)
T KOG0629|consen  419 LFELEPEHVNVCFWYVPPSLRGWQEN------------PERDSRLVKVAPKIKERMMKKGTTMIGYQPLGDKPNFFRMVI  486 (510)
T ss_pred             hhcCCCceEEEeeccCchHhccCccc------------chhhhHHHhhCcHHHHHHHhccceeeEecccccccchhheec
Confidence            754  777899999999876544321            12234456667788999999999888876554 346999999


Q ss_pred             cCCCCcHHHHHHHHHHHHHHHHhC
Q 037144          479 GNSMTMESHVRAAWTVVQEHLEAF  502 (502)
Q Consensus       479 ~~~~t~~~di~~~~~~l~~~~~~~  502 (502)
                      .|+..+++|+|.+++.|.++.+.+
T Consensus       487 sn~a~~~ad~dflldEIerlgq~l  510 (510)
T KOG0629|consen  487 SNPALTEADLDFLLDEIERLGQDL  510 (510)
T ss_pred             ccchhhhhhHHHHHHHHHHhccCC
Confidence            999889999999999999987653

>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type

Probab=100.00  E-value=3.7e-67  Score=547.50  Aligned_cols=457  Identities=18%  Similarity=0.265  Sum_probs=380.0

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHhcCCCCC-CCCCCchhHhhcCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCC-ccccc
Q 037144            5 YAQEFRRQGHMFVDFMAEYYKNIDKYPV-RSQVEPGYLKKRLPESAPYSPESVETILQDVQEHIVPGITHWQSP-NYFAY   82 (502)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p-~~~~~   82 (502)
                      +.+.|+++..++++.+.++.++.  .|- .+.++|++++.   ..+.+...+++++++++.+.+.++..+|+|| ||+||
T Consensus        15 n~~~~~~~~~~~~~~~~~~r~~~--~p~d~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~l~~~sv~~~~P~ry~gh   89 (608)
T TIGR03811        15 NGQLYKDLLNKLVDEHLGWRQNY--MPQDKPVISPQERTS---KSFTKTVNNMKDVLDELSSRLRTESVPWHSAGRYWGH   89 (608)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhc--CCCCCCCCCHHHhcc---cccccCccCHHHHHHHHHHHHhcCCCCCCCccceEEE
Confidence            56789999999999999999883  221 14567776655   3445555689999999999999999999999 99999


Q ss_pred             CCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHH
Q 037144           83 FPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARD  162 (502)
Q Consensus        83 ~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~  162 (502)
                      +++++.+|+++++++...+|+|...|+.||+++.+|+++.+|+++++|+++.       +|+||+|||+||++||++||+
T Consensus        90 m~~~~~~paila~~~a~~~N~n~~~~e~SP~~t~lE~~vi~~la~l~G~~~~-------~G~~TsGGT~ANl~aL~~AR~  162 (608)
T TIGR03811        90 MNSETLMPAILAYNYAMLWNGNNVAYESSPATSQMEEEVGKEFATLMGYKNG-------WGHIVADGSLANLEGLWYARN  162 (608)
T ss_pred             CcCCCCHHHHHHHHHHHHhCCCCCccccCchHHHHHHHHHHHHHHHhCCCCC-------CeEEeCChHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999874       689999999999999999998


Q ss_pred             HHH-----HHhC---------c--------------------------------cCCCCe-EEEeCCCCchhHHHHHHHc
Q 037144          163 RVL-----KKIG---------R--------------------------------ENISKL-VVYSSDQTHCAFQKAAQIV  195 (502)
Q Consensus       163 ~~~-----~~~~---------~--------------------------------~~~~~~-~v~~s~~~H~s~~~aa~~~  195 (502)
                      ...     +...         +                                ....+. ++++|+.+||||.|+|.++
T Consensus       163 ~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~il  242 (608)
T TIGR03811       163 IKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADII  242 (608)
T ss_pred             hhhccchhhhccccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHHHHc
Confidence            641     1100         0                                001122 7899999999999999999


Q ss_pred             CCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHH---HHhCC--EEEeec
Q 037144          196 GIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVA---KQFGI--WVHVDA  270 (502)
Q Consensus       196 Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~---~~~g~--~lhVDa  270 (502)
                      |+|.++++.||+|.  +++||+++|+++|+++.++|..|++||+|+|||.+|++|||++|+++|   +++|+  |+||||
T Consensus       243 GlG~~~vv~VpvD~--~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDA  320 (608)
T TIGR03811       243 GIGLDQVIPVPVDS--NYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDA  320 (608)
T ss_pred             CCCcccEEEeecCC--CCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeec
Confidence            99999999999985  679999999999999999999999999999999999999999999999   67898  699999


Q ss_pred             cccccc--ccC------------------------------ccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCch
Q 037144          271 AYAGSA--CIC------------------------------PEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPS  318 (502)
Q Consensus       271 A~g~~~--~~~------------------------------~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~  318 (502)
                      ||||++  +++                              +++++.++++++|||||+|+|||+++|++||++++|++.
T Consensus       321 AyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~Py~~G~ll~Rd~~  400 (608)
T TIGR03811       321 AYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYIPYSAGGIVIQDIR  400 (608)
T ss_pred             cccchhhhhhccccccccccchhhcccccccccccccccccHhHHHHHhcCcCceEEEeCcccccccCCCeEEEEEeCHH
Confidence            999975  222                              355677889999999999999999999999999999996


Q ss_pred             hhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCC-CCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhc
Q 037144          319 CLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRR-FRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTS  395 (502)
Q Consensus       319 ~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~  395 (502)
                       +.+.++..++|+.....+     .....+.+++++||+ ++++++|++++.+  |.+||++++++++++|++|.+.|++
T Consensus       401 -~~~~~~~~a~Yl~~~~~~-----~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~  474 (608)
T TIGR03811       401 -MRDVISYFATYVFEKGAD-----IPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNN  474 (608)
T ss_pred             -HHHHHhcCcchhcccccc-----CcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence             566788889999753221     112456678899986 6799999999998  9999999999999999999999988


Q ss_pred             ------CCCeEE--ecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-h-----cCcE
Q 037144          396 ------DKRFEV--AFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-V-----SGKV  461 (502)
Q Consensus       396 ------~~~~~l--~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~-----~g~~  461 (502)
                            .+.|++  +.+|++++|||++.+.+.                   .+.+..|++|+++++++. .     +..+
T Consensus       475 ~~~~~~~~~~el~~~~~pdlniV~Fr~~~~g~-------------------~~l~~~n~ln~~i~~~~~~~~g~~~~~~~  535 (608)
T TIGR03811       475 LEFKVGDKEIEVHPLTKPDFNMVDYVFNEKGN-------------------DDLVKMNKLNHAFYDYASYVKGSIYNNEF  535 (608)
T ss_pred             cccccCCCCeeEEecCCCCcceEEEEEecCCC-------------------ccHHHHHHHHHHHHHhhccccCCCCCcce
Confidence                  466787  678999999999987642                   133567899999999876 2     2223


Q ss_pred             EEEeeeE--------------------------CCEEEEEEEecCCC-CcHHHHHHHHHHHHHHHH
Q 037144          462 FMTHAIV--------------------------GGIYVLRFAAGNSM-TMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       462 ~~~~~~~--------------------------~g~~~lR~~~~~~~-t~~~di~~~~~~l~~~~~  500 (502)
                      +++.+.+                          ....+||.++|+|. ++.+.++.+++.|+++..
T Consensus       536 ~~s~t~~~~~~yg~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~m~p~~~~~~~~~~~~~~~~~~~~  601 (608)
T TIGR03811       536 ITSHTDFAIPDYGDSPFAFVNSLGFSDEEWQRAGKVTILRASVMTPYMNDKENFDEYAPKIKAAMQ  601 (608)
T ss_pred             EeeecccccchhhhhHHHHHHHcCCChhhhccCCceEEEEEEecCcccCChhhHHHHHHHHHHHHH
Confidence            4555432                          13468999999986 444778888888887654

This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.

>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]

Probab=100.00  E-value=8.6e-59  Score=473.45  Aligned_cols=437  Identities=24%  Similarity=0.313  Sum_probs=360.3

Q ss_pred             HHHHHHHhcCCCCCCCCCCchhHhhcCCCCCCCCCCCHHHHHHHHHHh-hcCCCCCCCCCcccccCCCCCCHHHHHHHHH
Q 037144           19 FMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQEH-IVPGITHWQSPNYFAYFPATSSVAGIVGEML   97 (502)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~il~~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l   97 (502)
                      .+.++......+...+..+|-+-.......+|+.|.+.++++.++... +.+...++.||+++.|..+.+.++..+.+.+
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~g~p~~~v~~~l~~~~~~d~~~~~~~p~~~~~~~~~~~~~~~a~~~~   82 (460)
T COG0076           3 GLIDKDMLNSKRYSGDSLSPLFGALSDSRMAPEKGEPLEEVLDELAELLIKDELYLDGHPRANLAGFCPTRVPPVAAELL   82 (460)
T ss_pred             hHHHHHHhhccCCCccccccchhhhhhhccCCccCCchhhHHHHHHHHhhcccccccCCcceEEEccCCCCCHHHHHHHH
Confidence            445555555555555666666666666778999999999999999998 4455556679999999999999999999999


Q ss_pred             HhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCcc-C--CC
Q 037144           98 SSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRE-N--IS  174 (502)
Q Consensus        98 ~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~-~--~~  174 (502)
                      ...+|+|...|..+|+++++|+++++|+++++|++...      .|+||+|||+||++|++++|+++.+..+.. +  .+
T Consensus        83 ~~~~~~nl~d~~~~p~a~~~E~~~v~~l~~l~~~~~~~------~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~  156 (460)
T COG0076          83 VSALNKNLGDPDESPAAAELEERVVNMLSDLLGAPEEA------SGTFTSGGTEANLLALLAARERWRKRALAESGKPGG  156 (460)
T ss_pred             HHHHhhcCCCcccChhHHHHHHHHHHHHHHHhCCCCCC------ceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCC
Confidence            99999999999999999999999999999999998654      799999999999999999999987543221 1  13


Q ss_pred             CeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhH
Q 037144          175 KLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKP  254 (502)
Q Consensus       175 ~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~e  254 (502)
                      .++|++|..+|+|+.|+++++|+   .++.+|+++. +++||+++|+++|++++..|    +||+++|||.+|.+|||++
T Consensus       157 ~P~ii~s~~aH~s~~Kaa~~lG~---~~~~v~~~~~-~~~id~~~l~~~i~~~t~~g----~vV~~aGtT~~G~iDdi~~  228 (460)
T COG0076         157 KPNIVCSETAHFSFEKAARYLGL---GLRRVPTVPT-DYRIDVDALEEAIDENTIGG----VVVGTAGTTDTGSIDDIEE  228 (460)
T ss_pred             CCeEEecCcchhHHHHHHHHhCC---CceeEEeccC-ccccCHHHHHHHHHhhccCc----eEEEEecCCCCCccCCHHH
Confidence            56899999999999999999999   7777777754 67999999999999998765    7999999999999999999


Q ss_pred             HHHHHHHhCCEEEeecccccccccCccchhh-hcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccC
Q 037144          255 LCDVAKQFGIWVHVDAAYAGSACICPEFRHF-IDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKN  333 (502)
Q Consensus       255 I~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~-~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~  333 (502)
                      |+++|++|++|+|||||+||+.+++.+.+.. ..+++++|||++|+|||+++|++||++++||+..+.+.......|+..
T Consensus       229 ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g~aP~~~G~il~rd~e~l~~~~~~~~~yl~~  308 (460)
T COG0076         229 LADIAEEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSITVDGHKYGLAPIGCGVVLFRDEEALRRILIFADYYLPG  308 (460)
T ss_pred             HHHHHHHcCCcEEEEccccceeecccCccchhhcCCCCceEEEECcccccCCCCCceEEEEECHHHhhhhhhcccccCCC
Confidence            9999999999999999999999988887777 578999999999999999999999999999997777776666677754


Q ss_pred             ccCCCCCcccccCCCcccccCCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEE
Q 037144          334 EATDQEPKEQEVGYKDWQITLCRRF-RSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCF  412 (502)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f  412 (502)
                      .           ....+++.++|.. .++++|+.++.+|.+||+++++++.+++++|.+.|++.+.|+++.+|.+++|||
T Consensus       309 ~-----------~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~l~~V~f  377 (460)
T COG0076         309 G-----------GIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVNEPELPIVAF  377 (460)
T ss_pred             C-----------CcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCccceEEE
Confidence            2           2334677788876 688999999999999999999999999999999999998899999999999999


Q ss_pred             EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHH
Q 037144          413 RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAW  492 (502)
Q Consensus       413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~  492 (502)
                      ++++..-                .-....+..+..+-.+......+|..++..+.+.++.++++.+.+..++.++ +.+.
T Consensus       378 r~~~~~~----------------~~~~~~~~~~~~gw~v~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  440 (460)
T COG0076         378 RLKDDED----------------TLADLSERLDRRGWQVPAQLLPKGLAIVFGTHVTGRQGLKFIVANLLITDRE-ESLL  440 (460)
T ss_pred             EcCCccc----------------chhchHHHHHhcCceeecccCCccceeeeeeEEeeeeeehhhcchhhhhhhh-HHHH
Confidence            9954210                0000112223334444455555676677777777888899888887766655 5555


Q ss_pred             HHHHH
Q 037144          493 TVVQE  497 (502)
Q Consensus       493 ~~l~~  497 (502)
                      ..+..
T Consensus       441 ~~~~~  445 (460)
T COG0076         441 ALIEE  445 (460)
T ss_pred             HHhhh
Confidence            55543

>PLN02263 serine decarboxylase

Probab=100.00  E-value=8.1e-57  Score=454.24  Aligned_cols=358  Identities=18%  Similarity=0.233  Sum_probs=303.3

Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCcccccCCCCCCH-HHHHHHHHHhhcCCCCcccccCh---hhHHHHHHHHHHHHHhcCC
Q 037144           56 VETILQDVQEHIVPGITHWQSPNYFAYFPATSSV-AGIVGEMLSSGFNVVGLDWISSP---AAVELENIVMDWLGQMLDL  131 (502)
Q Consensus        56 ~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~l~~~~n~~~~~~~~~p---~~~~le~~~~~~l~~l~g~  131 (502)
                      ++++|+++.+.+.++..+     |||| |...+. ++.+++++...+|+.+..|..+|   .+.++|+++++|+++++|+
T Consensus        75 ~~~~l~~~~~~~~~~~~~-----~~gY-p~n~~~d~s~l~~~l~~~~nN~Gdp~~~s~~~~~s~~~E~~Vi~wla~L~g~  148 (470)
T PLN02263         75 MASVLARYRKTLVERTKH-----HLGY-PYNLDFDYGALGQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEI  148 (470)
T ss_pred             HHHHHHHHHHHHHhcccc-----eeCC-CCcccCChhhHHHHHHhhccCCCCccccCCcchhHHHHHHHHHHHHHHHhCC
Confidence            589999999999887543     8999 555666 88999999999999999999988   7899999999999999999


Q ss_pred             CCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCC
Q 037144          132 PKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSS  211 (502)
Q Consensus       132 ~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~  211 (502)
                      |++.     .+|++|+|||+||++|+++||+.+         ++.++|+|+.+|||+.|+++++|+   +++.||+++  
T Consensus       149 p~~~-----~~G~vtsGGTEaNL~Al~aARe~~---------~~~vvy~S~~aH~Sv~KAa~llgi---~~~~Vp~d~--  209 (470)
T PLN02263        149 EKNE-----YWGYITNCGTEGNLHGILVGREVF---------PDGILYASRESHYSVFKAARMYRM---ECVKVDTLV--  209 (470)
T ss_pred             CCCC-----CeEEEeCcHHHHHHHHHHHHHhhc---------CCcEEEEcCCccHHHHHHHHhcCC---cceEeccCC--
Confidence            8631     268999999999999999999963         456899999999999999999999   999999975  


Q ss_pred             CcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCC-----EEEeecccccccccCccchhhh
Q 037144          212 SYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGI-----WVHVDAAYAGSACICPEFRHFI  286 (502)
Q Consensus       212 ~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~-----~lhVDaA~g~~~~~~~~~~~~~  286 (502)
                      +|+||+++|+++|.+++   .+|++|++|+|||++|++|||++|+++|+++|+     |+||||||||+++++.+....+
T Consensus       210 ~g~mD~~aL~~aI~~d~---~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~~~  286 (470)
T PLN02263        210 SGEIDCADFKAKLLANK---DKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRAPKV  286 (470)
T ss_pred             CCcCcHHHHHHHHHhCC---CCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhccccccc
Confidence            67999999999997754   469999999999999999999999999999997     9999999999988654444446


Q ss_pred             cCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCC-CchHHHH
Q 037144          287 DGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRF-RSLKLWV  365 (502)
Q Consensus       287 ~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~-~al~~~~  365 (502)
                      .+.+.+|||++|+|||+++|++||++++|++.  .+.+...+.|+...              +.++++||++ .++++|+
T Consensus       287 df~~~vDSIsvD~HK~l~~P~~cgvll~R~~~--~~~~~~~~~Yl~~~--------------d~ti~gSR~g~~al~lW~  350 (470)
T PLN02263        287 TFKKPIGSVSVSGHKFVGCPMPCGVQITRMEH--INVLSSNVEYLASR--------------DATIMGSRNGHAPIFLWY  350 (470)
T ss_pred             CCCcCccEEEECCccccCCCcCEEEEEEehhh--HhhhccChHhhCCC--------------CCCcCCCCCcHHHHHHHH
Confidence            66677999999999999999999999999653  35677888898653              2478899997 4899999


Q ss_pred             HHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhH
Q 037144          366 VIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTN  445 (502)
Q Consensus       366 ~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  445 (502)
                      +|+.+|.+|++++++++.++|+++.+.|++. +++++.+|.+++|+|+.+..                            
T Consensus       351 ~L~~~G~~G~~~~i~~~~~~A~~l~~~l~~~-g~~~~~~p~s~~V~f~~p~~----------------------------  401 (470)
T PLN02263        351 TLNRKGYRGFQKEVQKCLRNAHYLKDRLREA-GISAMLNELSSTVVFERPKD----------------------------  401 (470)
T ss_pred             HHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEeCCCceEEEEecCch----------------------------
Confidence            9999999999999999999999999999998 78877788899999974321                            


Q ss_pred             HHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144          446 EFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       446 ~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~  500 (502)
                          ..    ..+|.. ++.    -...+|++++ ++.+.+.+|++++.|++..+
T Consensus       402 ----~~----~~~gW~-L~~----~~~~~Hivvm-phv~~~~id~fi~DL~~~~~  442 (470)
T PLN02263        402 ----EE----FVRRWQ-LAC----QGNIAHVVVM-PSVTIEKLDYFLKELVEKRS  442 (470)
T ss_pred             ----HH----hhcceE-Ecc----CCCcEEEEEc-CCCCHHHHHHHHHHHHHHHh
Confidence                01    123542 222    1236999998 55667899999999987654

>TIGR01788 Glu-decarb-GAD glutamate decarboxylase

Probab=100.00  E-value=5.9e-56  Score=452.06  Aligned_cols=398  Identities=16%  Similarity=0.207  Sum_probs=328.4

Q ss_pred             CCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCcccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHH
Q 037144           47 ESAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLG  126 (502)
Q Consensus        47 ~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~  126 (502)
                      ..+|++|.+.+++++++...+..  .+..||+|++|+.+++.+.  +.+++...+|.+...|..+|..+++|+++++|++
T Consensus        15 ~~~p~~~~~~~~~~~~~~~~iyl--d~~a~~~~~~~~tt~~~p~--~~~~~~~~l~~~~~np~s~~~~~~le~~~~~~la   90 (431)
T TIGR01788        15 YRMPEEEMPPDAAYQLIHDELSL--DGNPRLNLATFVTTWMEPE--ARKLMDETINKNMIDKDEYPQTAEIENRCVNMLA   90 (431)
T ss_pred             ccCCCCCCCHHHHHHHHHHHhhh--cCCcceeeeeeeCCCCCHH--HHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHH
Confidence            47899999999999999987642  4556899999997655444  6888888898887778888888899999999999


Q ss_pred             HhcCCC-C-ccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccC--CCCeEEEeCCCCchhHHHHHHHcCCCCCCE
Q 037144          127 QMLDLP-K-SFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGREN--ISKLVVYSSDQTHCAFQKAAQIVGIDRKNI  202 (502)
Q Consensus       127 ~l~g~~-~-~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~--~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v  202 (502)
                      +++|++ . ..     ..|++|+||||||++|+.++|+++..+....+  ..+.+||+|+.+|+||.|+++++|+   ++
T Consensus        91 ~llg~~~~~~~-----~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~---~v  162 (431)
T TIGR01788        91 DLWHAPAKDAE-----AVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKFARYFDV---EL  162 (431)
T ss_pred             HHhCCCCCCCC-----CeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHHHHHcCc---ee
Confidence            999998 2 11     26788999999999999999865433211111  1356899999999999999999999   99


Q ss_pred             EEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh------CCEEEeeccccccc
Q 037144          203 RAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF------GIWVHVDAAYAGSA  276 (502)
Q Consensus       203 ~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~------g~~lhVDaA~g~~~  276 (502)
                      +.||+++ +++.||+++|+++|+++      +++|++++++|.+|++|||++|+++|+++      |+|+||||||+|++
T Consensus       163 ~~i~~d~-~~~~vd~~~L~~~i~~~------t~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~  235 (431)
T TIGR01788       163 REVPMDP-GRYVIDPEQVVEAVDEN------TIGVVCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFI  235 (431)
T ss_pred             EEEecCC-CceeeCHHHHHHHHhhC------CeEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHH
Confidence            9999986 23689999999999865      46999999999999999999999999999      99999999999987


Q ss_pred             cc--CccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccC
Q 037144          277 CI--CPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITL  354 (502)
Q Consensus       277 ~~--~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~  354 (502)
                      ++  +++.+..+. ++++||+++|+|||+++|+|||++++|++..+...+...+.|+....            .++++++
T Consensus       236 ~p~~~~~~~~~~~-~~~~DSis~s~HK~~~~P~g~G~l~~r~~~~l~~~~~~~~~yl~~~~------------~~~t~~~  302 (431)
T TIGR01788       236 APFVYPDLEWDFR-LPRVKSINVSGHKYGLVYPGVGWVIWRDEEALPEELIFHVNYLGGDE------------PTFTLNF  302 (431)
T ss_pred             HHHhCCCchhhcC-CCCceEEEECchhccCCCCCcEEEEEeChHHcchhheecccccCCCC------------CCcceec
Confidence            64  344444343 67999999999999999999999999988655556666777885421            2357889


Q ss_pred             CCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-CCeeEEEEEeecCcchhhhhhcccCCCc
Q 037144          355 CRRF-RSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP-RNFSLVCFRVTPSAVMDKLRTKYKNGTY  432 (502)
Q Consensus       355 sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~-~~~~~v~f~~~~~~~~~~~~~~~~~~~~  432 (502)
                      ||++ +++++|+.++.+|.+|++++++++.+++++|.++|++.|+|+++.+ +.+++|||++.+..-             
T Consensus       303 sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~~~~iV~Fr~~~~~~-------------  369 (431)
T TIGR01788       303 SRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGSGIPLVAFKLKDDAD-------------  369 (431)
T ss_pred             CchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCCCceEEEEEeCCCCC-------------
Confidence            9986 7789999999999999999999999999999999999999999987 789999999976310             


Q ss_pred             ccccccchhHhhHHHHHHHHHHHHhcCcEE---EEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          433 DQYRQFSEEERTNEFNRELLESINVSGKVF---MTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       433 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~---~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                                 .+..+.++.++|.++|+++   .+++.++|..++|++++ ++.+.+.++++++.|.++...
T Consensus       370 -----------~~~~~~~l~~~L~~~G~~~~~~~~p~~~~~~~~lR~~~~-~~~~~~~~~~~~~~~~~~~~~  429 (431)
T TIGR01788       370 -----------PGYTLYDLSHRLRERGWIVPAYTLPKNAEDIVVMRIVVR-EGFSRDLAELLIEDIEAALAY  429 (431)
T ss_pred             -----------CCcCHHHHHHHHHHCCCcccCCCCCCccCCeEEEEEEec-CCCCHHHHHHHHHHHHHHHHh
Confidence                       0112567888999999864   45556788999999986 556677999999999988764

This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).

>PLN03032 serine decarboxylase; Provisional

Probab=100.00  E-value=2e-49  Score=395.98  Aligned_cols=357  Identities=19%  Similarity=0.237  Sum_probs=285.2

Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCcccccCCCCCCHHHHHHHHHHhhcCCCCccccc---ChhhHHHHHHHHHHHHHhcCCC
Q 037144           56 VETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWIS---SPAAVELENIVMDWLGQMLDLP  132 (502)
Q Consensus        56 ~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~---~p~~~~le~~~~~~l~~l~g~~  132 (502)
                      ..++++.+.+.+..     .+..|+||..+...-++.+..++....|+.+..+..   +..+.++|+++++|+++++|++
T Consensus         8 ~~~~~~~~~~~~~~-----~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg~~   82 (374)
T PLN03032          8 MADILASYDKLLAE-----KSSVHFGYPYNLDFDYGELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELE   82 (374)
T ss_pred             HHHHHHHHHHHHHH-----hhhhccCCCchhccChHHHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhCCC
Confidence            45677777766543     356789998776666667777776655544444333   3468999999999999999997


Q ss_pred             CccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCC
Q 037144          133 KSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSS  212 (502)
Q Consensus       133 ~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~  212 (502)
                      ++.     .+|+||+||||||++|++++|+..         ++.+|++|+.+|+|+.|+++++|+   .++.||++.  +
T Consensus        83 ~~~-----~~G~fTsGGTEaNl~al~~ar~~~---------~~~~vi~s~~~H~Sv~kaa~~lg~---~~~~V~~d~--~  143 (374)
T PLN03032         83 KDE-----YWGYITTCGTEGNLHGILVGREVF---------PDGILYASRESHYSVFKAARMYRM---EAVKVPTLP--S  143 (374)
T ss_pred             Ccc-----CCEEEeCchHHHHHHHHHHHHHhC---------CCcEEEeCCCceeHHHHHHHHcCC---CCeEeeeCC--C
Confidence            542     158999999999999999998752         345899999999999999999999   789999986  5


Q ss_pred             cccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhC-----CEEEeecccccccccCccchhhhc
Q 037144          213 YGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFG-----IWVHVDAAYAGSACICPEFRHFID  287 (502)
Q Consensus       213 ~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g-----~~lhVDaA~g~~~~~~~~~~~~~~  287 (502)
                      |+||+++|+++|++++   ..|++|++++|||.+|++|||++|+++|++||     +|+|||||+|++.+++......++
T Consensus       144 g~id~~~L~~~i~~~~---~~~~lvv~tagtt~tG~idpi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~  220 (374)
T PLN03032        144 GEIDYDDLERALAKNR---DKPAILNVNIGTTVKGAVDDLDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEVT  220 (374)
T ss_pred             CcCcHHHHHHHHHHcC---CCCEEEEEEecCcCCccCCCHHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCCcccC
Confidence            7999999999998653   35889999999999999999999999999996     599999999998876533333333


Q ss_pred             CCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCC-CCchHHHHH
Q 037144          288 GVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRR-FRSLKLWVV  366 (502)
Q Consensus       288 ~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~  366 (502)
                      ....+||+++|+|||+++|++||++++|++. + ..+...++|+...              ++++++||+ +.++++|++
T Consensus       221 ~~~~vDSis~s~HK~~g~P~g~G~ll~r~~~-~-~~~~~~~~Yl~~~--------------d~ti~gSR~g~~~l~~w~~  284 (374)
T PLN03032        221 FRKPIGSVSVSGHKFLGCPMPCGVALTRKKH-V-KALSQNVEYLNSR--------------DATIMGSRNGHAPLYLWYT  284 (374)
T ss_pred             CCcCCcEEEECcccccCCCcCeEEEEEEchh-h-HhhccCCcccCCC--------------CCcccCCCchHHHHHHHHH
Confidence            3457999999999999999999999999753 2 3566677887542              368999997 678999999


Q ss_pred             HHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHH
Q 037144          367 IRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNE  446 (502)
Q Consensus       367 l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  446 (502)
                      |+.+|.+|++++++++.+++++|.+.|++. +++++.+|.+++|+|+.+..                           + 
T Consensus       285 l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~-~~~~~~~p~~~~V~f~~~~~---------------------------~-  335 (374)
T PLN03032        285 LRRKGYRGIKRDVQHCMRNAHYLKDRLTEA-GLTCRLNELSSTVVFERPMD---------------------------E-  335 (374)
T ss_pred             HHHhCHHHHHHHHHHHHHHHHHHHHHHHhC-CCcEEECCCceEEEEcCCCc---------------------------H-
Confidence            999999999999999999999999999997 78988888899999976531                           1 


Q ss_pred             HHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144          447 FNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEH  498 (502)
Q Consensus       447 ~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~  498 (502)
                         .+.     +|. .++..    +.++|++++ ++.+++.||++++.|++.
T Consensus       336 ---~~~-----~~w-~l~~~----~~~~hi~vm-~~~~~~~id~fi~dl~~~  373 (374)
T PLN03032        336 ---AFI-----KKW-QLACE----GDIAHVVVM-PNVTVEKLDEFVEELVEV  373 (374)
T ss_pred             ---hHh-----hee-eeccc----CCEEEEEEC-CCCCHHHHHHHHHHHhcc
Confidence               111     243 22321    138999998 556678999999988763

>PRK02769 histidine decarboxylase; Provisional

Probab=100.00  E-value=5.4e-48  Score=388.74  Aligned_cols=356  Identities=19%  Similarity=0.265  Sum_probs=284.3

Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCcccccCCCCCCH-HHHHHHHHHhhcCCCCcccccCh----hhHHHHHHHHHHHHHhcC
Q 037144           56 VETILQDVQEHIVPGITHWQSPNYFAYFPATSSV-AGIVGEMLSSGFNVVGLDWISSP----AAVELENIVMDWLGQMLD  130 (502)
Q Consensus        56 ~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~l~~~~n~~~~~~~~~p----~~~~le~~~~~~l~~l~g  130 (502)
                      ..+.|+.+...+.      +||+++.+++..... ++.+.+++....|+.+. +...+    .+.++|+++++|+++++|
T Consensus         7 ~~~~~~~~~~~~~------~~~~~~~g~p~~~~~~~~~~~~~~~~~~~n~gn-p~~~~~~g~~~~~~e~~~~~~~a~l~g   79 (380)
T PRK02769          7 DQKEIEDFWLYLR------HNQYFNVGYPEAADFDYSALKRFFSFSINNCGD-PYSKSNYPLNSFDFERDVMNFFAELFK   79 (380)
T ss_pred             HHHHHHHHHHHHH------HhhhcccCCCchhhcCHHHHHHHHHhhhccCCC-ccccCCCCCChHHHHHHHHHHHHHHhC
Confidence            3556676666543      367766666555544 68888888887776443 33333    478999999999999999


Q ss_pred             CCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCC
Q 037144          131 LPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKS  210 (502)
Q Consensus       131 ~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~  210 (502)
                      ++...     ..|+||+||||||+.|++++|++.         ++.+|++|+.+|+|+.|+++++|+   ..+.||+++ 
T Consensus        80 ~~~~~-----~~G~~TsGgTean~~a~~~ar~~~---------~~~~ii~s~~~H~Sv~ka~~~lg~---~~~~V~~~~-  141 (380)
T PRK02769         80 IPFNE-----SWGYITNGGTEGNLYGCYLARELF---------PDGTLYYSKDTHYSVSKIARLLRI---KSRVITSLP-  141 (380)
T ss_pred             CCCCC-----CCEEEecChHHHHHHHHHHHHHhC---------CCcEEEeCCCceehHHHHHHHcCC---CCceeccCC-
Confidence            97542     258999999999999999998752         567899999999999999999999   788899875 


Q ss_pred             CCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhC---CEEEeecccccccccCccchhhhc
Q 037144          211 SSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFG---IWVHVDAAYAGSACICPEFRHFID  287 (502)
Q Consensus       211 ~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g---~~lhVDaA~g~~~~~~~~~~~~~~  287 (502)
                       +|+||+++|+++|+++   +.+|.+|++++|||.+|.+||+++|+++|++||   +|+|||||+|++.+++.+....++
T Consensus       142 -~g~id~~~L~~~i~~~---~~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~d  217 (380)
T PRK02769        142 -NGEIDYDDLISKIKEN---KNQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPFS  217 (380)
T ss_pred             -CCcCcHHHHHHHHHhC---CCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEecccceeecccCccccCC
Confidence             5799999999999875   567889999999999999999999999999998   699999999998887654444455


Q ss_pred             CCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCC-CCchHHHHH
Q 037144          288 GVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRR-FRSLKLWVV  366 (502)
Q Consensus       288 ~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~  366 (502)
                      ..+++||+++|+|||+++|+|||++++|++.. . .+.....|+..              .+.++++||+ +.++++|++
T Consensus       218 ~~~~vDsis~s~HK~~~~P~g~G~l~~r~~~~-~-~~~~~~~yl~~--------------~d~t~~GSR~g~~~l~lw~a  281 (380)
T PRK02769        218 FADGIDSIAISGHKFIGSPMPCGIVLAKKKYV-E-RISVDVDYIGS--------------RDQTISGSRNGHTALLLWAA  281 (380)
T ss_pred             ccCCCCEEEECCcccCCCCCCcEEEEEehhhh-h-hcccCccccCC--------------CCCCccCCCCcHHHHHHHHH
Confidence            44589999999999999999999999997542 2 34445566642              2357889997 578999999


Q ss_pred             HHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHH
Q 037144          367 IRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNE  446 (502)
Q Consensus       367 l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  446 (502)
                      ++.+|.+|++++++++.++++++.++|++. |++++.+|.+++|+|+.+..                             
T Consensus       282 L~~lg~~G~~~~~~~~~~la~~l~~~L~~~-g~~~~~~p~~~~v~f~~~~~-----------------------------  331 (380)
T PRK02769        282 IRSLGSKGLRQRVQHCLDMAQYAVDRLQAN-GIPAWRNPNSITVVFPCPSE-----------------------------  331 (380)
T ss_pred             HHHHCHHHHHHHHHHHHHHHHHHHHHHHhC-CCEEEcCCCceEEEEcCCCH-----------------------------
Confidence            999999999999999999999999999886 89999999999999965321                             


Q ss_pred             HHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144          447 FNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       447 ~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~  500 (502)
                         .+.     +|. .++..    +.++|++++ ++.+++.||.+++.|.+...
T Consensus       332 ---~~~-----~~w-~l~~~----~~~~hi~~~-~~~~~~~~~~f~~dl~~~~~  371 (380)
T PRK02769        332 ---RIW-----KKW-HLATS----GNQAHIITM-PHHNKQQIDSLIDELIFDLK  371 (380)
T ss_pred             ---HHH-----hCe-eEccc----CCEEEEEEC-CCCCHHHHHHHHHHHHHHHh
Confidence               121     243 23322    238999998 55667799999999887643

>cd06450 DOPA_deC_like DOPA decarboxylase family

Probab=100.00  E-value=6.6e-44  Score=359.34  Aligned_cols=340  Identities=36%  Similarity=0.602  Sum_probs=288.4

Q ss_pred             ccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCC-CccCcCCCCcEEEcCCchHHHHHHH
Q 037144           79 YFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLP-KSFLFSGNGGGVIQGTTCEALLCTL  157 (502)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~-~~~~~~~~~~g~~t~ggt~a~~~al  157 (502)
                      |++++++++.+++.+++++...+|++...|..+|...++|+++++|+++++|++ ..      ..++||+|||+||++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~------~~~~~t~ggt~a~~~al   74 (345)
T cd06450           1 FLAGFVTTMDPPALLLEMLTSAKNAIDFTWDESPAATEMEAEVVNWLAKLFGLPSED------ADGVFTSGGSESNLLAL   74 (345)
T ss_pred             CcccccCCCcHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHhCCCCCC------CCEEEeCChhHHHHHHH
Confidence            688888889999999999999999998889999999999999999999999997 32      26899999999999999


Q ss_pred             HHHHHHHHHHhCcc---CCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCcc
Q 037144          158 TAARDRVLKKIGRE---NISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIP  234 (502)
Q Consensus       158 ~~a~~~~~~~~~~~---~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p  234 (502)
                      .+++.++.++....   ..++.+|+++..+|+++.++++.+|.   +++.+|+++  ++.+|+++|+++|++..+++.++
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~~~~  149 (345)
T cd06450          75 LAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKAAAYLDV---KVRLVPVDE--DGRMDPEALEAAIDEDKAEGLNP  149 (345)
T ss_pred             HHHHHHhhhhhhcccccccCCeEEEEcCcchhHHHHHHHHHhc---CeEEeeeCC--CCCcCHHHHHHHHHHHHHCCCCc
Confidence            99987543321111   11356899999999999999999999   999999976  35999999999998877777778


Q ss_pred             EEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEe
Q 037144          235 LFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWV  314 (502)
Q Consensus       235 ~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~  314 (502)
                      .+|+++.++|++|.++|+++|+++|+++|+|+|+|+||+.+.++.+.......++.++|++++++|||+++|+++|++++
T Consensus       150 ~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~g~g~~~~  229 (345)
T cd06450         150 IMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPLGCSAVLV  229 (345)
T ss_pred             EEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEechhhHHHhhChhhHHHhcCccccCEEEEchhHhhCCCcchHHHHH
Confidence            88999999999999999999999999999999999999988876654444344556899999999999999999998764


Q ss_pred             eCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHh
Q 037144          315 KDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVT  394 (502)
Q Consensus       315 r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~  394 (502)
                      +                                            ++++|.+++.++.+++++++++..++++++.+.|+
T Consensus       230 ~--------------------------------------------~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~  265 (345)
T cd06450         230 R--------------------------------------------ALKLWATLRRFGRDGYGEHIDRIVDLAKYLAELIR  265 (345)
T ss_pred             H--------------------------------------------HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHh
Confidence            3                                            35678899999999999999999999999999999


Q ss_pred             cCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEE
Q 037144          395 SDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVL  474 (502)
Q Consensus       395 ~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~l  474 (502)
                      ++++++++.+++.++++|++.+..                        ..+..+.++.++|.++|.+++++..+.+..++
T Consensus       266 ~~~~~~~~~~~~~~iv~f~~~~~~------------------------~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~l  321 (345)
T cd06450         266 ADPGFELLGEPNLSLVCFRLKPSV------------------------KLDELNYDLSDRLNERGGWHVPATTLGGPNVL  321 (345)
T ss_pred             cCCCeEEecCCceeEEEEEECCcc------------------------hhhHHHHHHHHHHHhcCCEEEEeeEECCeEEE
Confidence            999999987788999999986520                        00122457888888888777777666677899


Q ss_pred             EEEecCCCCcHHHHHHHHHHHHH
Q 037144          475 RFAAGNSMTMESHVRAAWTVVQE  497 (502)
Q Consensus       475 R~~~~~~~t~~~di~~~~~~l~~  497 (502)
                      |+++++++|+++||++++++|++
T Consensus       322 Ris~~~~~~t~~di~~l~~~l~~  344 (345)
T cd06450         322 RFVVTNPLTTRDDADALLEDIER  344 (345)
T ss_pred             EEEecCCCCCHHHHHHHHHHHHh
Confidence            99998887888899999999876

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.

>PRK13520 L-tyrosine decarboxylase; Provisional

Probab=100.00  E-value=4.7e-35  Score=297.86  Aligned_cols=367  Identities=21%  Similarity=0.274  Sum_probs=270.0

Q ss_pred             CCHHHHHHHHHHhhcCCCCCCCCCcccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCC
Q 037144           54 ESVETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPK  133 (502)
Q Consensus        54 ~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~  133 (502)
                      .+.+++|+.+++.-.++... .  ++|+...+. ..|.++ +.+...+..+.......+...+++.++.+++++++|+++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~-~~~~~~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~   76 (371)
T PRK13520          2 LSEEEILEELEEYRSEDLKY-E--RILSSMCTE-PHPIAR-KAHEMFLETNLGDPGLFPGTAKLEEEAVEMLGELLHLPD   76 (371)
T ss_pred             CCHHHHHHHHHHHHhcCCCH-H--HeeeeeecC-chHHHH-HHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCC
Confidence            46789999999877665433 2  578876543 334433 444444433322222235677888999999999999976


Q ss_pred             ccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCc
Q 037144          134 SFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSY  213 (502)
Q Consensus       134 ~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~  213 (502)
                      .       .+++++|||++|..++.+++....       .+++.|++++.+|+++.++++..|+   +++.||+++  ++
T Consensus        77 ~-------~~~~~~ggt~a~~~a~~~~~~~~~-------~~~~~vl~~~~~h~s~~~~~~~~g~---~~~~v~~~~--~~  137 (371)
T PRK13520         77 A-------YGYITSGGTEANIQAVRAARNLAK-------AEKPNIVVPESAHFSFDKAADMLGV---ELRRAPLDD--DY  137 (371)
T ss_pred             C-------CeEEecCcHHHHHHHHHHHHhhcc-------CCCceEEecCcchHHHHHHHHHcCc---eEEEecCCC--CC
Confidence            4       578999999999998888765310       1357889999999999999999999   999999875  46


Q ss_pred             ccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhc-CCCCC
Q 037144          214 GLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFID-GVECV  292 (502)
Q Consensus       214 ~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~-~~~~a  292 (502)
                      .+|+++|+++|++++      .+|+++.++|++|.++|+++|+++|+++|+++|||+||+++.+........+. ...++
T Consensus       138 ~~d~~~l~~~i~~~~------~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~v  211 (371)
T PRK13520        138 RVDVKAVEDLIDDNT------IGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGV  211 (371)
T ss_pred             cCCHHHHHHHHhhCC------EEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCC
Confidence            899999999997643      36777888999999999999999999999999999999887643211100011 23479


Q ss_pred             CeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCC-CCchHHHHHHHHhc
Q 037144          293 DSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRR-FRSLKLWVVIRNFG  371 (502)
Q Consensus       293 Dsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~g  371 (502)
                      |++++++|||+++|.++|+++++++..+. .+....+|+....             .+...+++. ...+++|.+++.++
T Consensus       212 d~~~~s~~K~~~a~~~~G~~~~~~~~~~~-~l~~~~~~~~~~~-------------~~~~~gt~~~~~~~~~~~al~~l~  277 (371)
T PRK13520        212 DSITIDPHKMGLAPIPAGGILFRDESYLD-ALAVDTPYLTSKK-------------QATLTGTRSGAGVAATYAVMKYLG  277 (371)
T ss_pred             ceEEECCccccCccCCceEEEEcCHHHHH-hhcccCccccCCC-------------CcceEeeccChHHHHHHHHHhhhc
Confidence            99999999999989999999988775443 3333334543211             112233443 24568889999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHH
Q 037144          372 VANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNREL  451 (502)
Q Consensus       372 ~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  451 (502)
                      .+|++++.++..+++++|.+.|+++ +++++.++..++++|.+.+                               ..++
T Consensus       278 ~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~v~~~~~~-------------------------------~~~v  325 (371)
T PRK13520        278 REGYRKVVERCMENTRWLAEELKER-GFEPVIEPVLNIVAFDDPN-------------------------------PDEV  325 (371)
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCceEEEEecCC-------------------------------HHHH
Confidence            9999999999999999999999988 8985556677888887642                               2356


Q ss_pred             HHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144          452 LESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       452 ~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~  500 (502)
                      .++|.++|..+ ...  .+..++|++++. .++++||+++++.|+++.+
T Consensus       326 ~~~L~~~gi~v-~~~--~~~~~iRis~~~-~~t~edi~~~~~~l~~~~~  370 (371)
T PRK13520        326 REKLRERGWRV-SVT--RCPEALRIVCMP-HVTREHIENFLEDLKEVKK  370 (371)
T ss_pred             HHHHHHCCcee-ccC--CCCCEEEEEEEC-CCCHHHHHHHHHHHHHHhh
Confidence            66677778643 321  234589999864 6788899999999998765

>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA

Probab=100.00  E-value=2.2e-34  Score=293.13  Aligned_cols=368  Identities=20%  Similarity=0.258  Sum_probs=265.7

Q ss_pred             CHHHHHHHHHHhhcCCCCCCCCCcccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCc
Q 037144           55 SVETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKS  134 (502)
Q Consensus        55 ~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~  134 (502)
                      +.+++++.+.+ ++.+..+.++++++..+...+.++.  .+.+..++..+.......|....+++++.+++++++|+++.
T Consensus         1 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~   77 (373)
T TIGR03812         1 SEEEVLEELKE-YRSEDLKYSDGRILGSMCTNPHPIA--VKAYDMFIETNLGDPGLFPGTKKIEEEVVGSLGNLLHLPDA   77 (373)
T ss_pred             CHHHHHHHHHH-HHhcCCCCCCCcEEEEEeCCchHHH--HHHHHHHhhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCC
Confidence            46789999998 4567777788898888766544442  22333333222111122356678889999999999999764


Q ss_pred             cCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcc
Q 037144          135 FLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYG  214 (502)
Q Consensus       135 ~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~  214 (502)
                             .+++++||+++++.++.+++.....     +.+++.|+++..+|+++.++++..|+   +++.+|+++  ++.
T Consensus        78 -------~~~~~~g~~~~~~~~~~~~~~~~~~-----~~~g~~vl~~~~~h~~~~~~~~~~G~---~~~~v~~~~--~~~  140 (373)
T TIGR03812        78 -------YGYIVSGGTEANIQAVRAAKNLARE-----EKRTPNIIVPESAHFSFEKAAEMLGL---ELRYAPLDE--DYT  140 (373)
T ss_pred             -------CeEEeccHHHHHHHHHHHHHHHHhc-----cCCCcEEEECCcchHHHHHHHHHcCC---eEEEEeeCC--CCC
Confidence                   5788999999998887766542110     01456889999999999999999999   999999875  568


Q ss_pred             cCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccch----hhhcCCC
Q 037144          215 LSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFR----HFIDGVE  290 (502)
Q Consensus       215 ~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~----~~~~~~~  290 (502)
                      +|+++|++++++++      ..|+.+.++|++|.++|+++|.++|+++|+|+|||+||+++........    ..--...
T Consensus       141 ~d~~~l~~~l~~~~------~~vv~~~~~~~tG~~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~  214 (373)
T TIGR03812       141 VDVKDVEDLIDDNT------IGIVGIAGTTELGQIDDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLP  214 (373)
T ss_pred             cCHHHHHHHHhhCc------EEEEEECCCCCCCccCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCC
Confidence            99999999997643      2455555899999999999999999999999999999987754321110    0000123


Q ss_pred             CCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCC-CCchHHHHHHHH
Q 037144          291 CVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRR-FRSLKLWVVIRN  369 (502)
Q Consensus       291 ~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~  369 (502)
                      ++|++++++|||+..|.++|.++++++..+. .+....+|+....             .+...++|. ...++++.+++.
T Consensus       215 ~~d~~~~s~~K~~~~~~~~G~~~~~~~~~~~-~l~~~~~~~~~~~-------------~~~~~gt~~~~~~~~~~~~l~~  280 (373)
T TIGR03812       215 GVQSITIDPHKMGLSPIPAGGILFRSKSYLK-YLSVDAPYLTVKK-------------QATITGTRSGASAAATYAVIKY  280 (373)
T ss_pred             CCCEEEECccccCCCcCCceEEEEeCHHHHh-hhcccCcccCCCC-------------CcceEeechhHHHHHHHHHHHH
Confidence            7899999999998889999988887765543 3333334443211             112334554 345688899999


Q ss_pred             hcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHH
Q 037144          370 FGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNR  449 (502)
Q Consensus       370 ~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  449 (502)
                      ++.+|++++.++..+++++|++.|+++ +++.+.++..++++|+.++                               ..
T Consensus       281 l~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~v~~~~~~-------------------------------~~  328 (373)
T TIGR03812       281 LGREGYRKIVAECMENTRYLVEELKKI-GFEPVIEPVLNIVAFEVDD-------------------------------PE  328 (373)
T ss_pred             hCHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEcCCCceEEEEEeCC-------------------------------HH
Confidence            999999999999999999999999998 5665546777888887642                               12


Q ss_pred             HHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144          450 ELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEH  498 (502)
Q Consensus       450 ~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~  498 (502)
                      .+.++|.++|.+ +...  .+..++|++++. .++++|+++++++|+++
T Consensus       329 ~v~~~L~~~gi~-v~~~--~~~~~iRis~~~-~~t~edid~l~~~L~~~  373 (373)
T TIGR03812       329 EVRKKLRDRGWY-VSVT--RCPKALRIVVMP-HVTREHIEEFLEDLKEI  373 (373)
T ss_pred             HHHHHHHHCCce-eccC--CCCCEEEEEEEC-CCCHHHHHHHHHHHhhC
Confidence            566777777864 3332  235689999875 47778999999999763

Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.

>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=1.4e-34  Score=292.46  Aligned_cols=355  Identities=15%  Similarity=0.132  Sum_probs=265.1

Q ss_pred             cccccCCCCCCHHHHHHHHHHhhc---CCC--CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHH
Q 037144           78 NYFAYFPATSSVAGIVGEMLSSGF---NVV--GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEA  152 (502)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~l~~~~---n~~--~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a  152 (502)
                      .||.+..++. .|..+.+.+..++   +.|  ...+..+..+++.+.++++.+++++|.++..      +.+||.|+|++
T Consensus        24 vylD~aa~~~-~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~------eIvft~~tT~a   96 (405)
T COG0520          24 VYLDNAATSQ-KPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSSD------EIVFTRGTTEA   96 (405)
T ss_pred             EEecCccccc-CCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCCC------eEEEeCChhHH
Confidence            5777665544 6677777766644   222  3455566677889999999999999998522      79999999999


Q ss_pred             HHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh----HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHH
Q 037144          153 LLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA----FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDV  228 (502)
Q Consensus       153 ~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s----~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~  228 (502)
                      +.......... .+       ++++|++|...|+|    |...++..|+   +++.+|+++  ++.+|.+++++.+++++
T Consensus        97 ln~va~~l~~~-~~-------~gdeIv~s~~EH~sn~~pw~~~~~~~Ga---~v~~i~~~~--~g~~~~~~~~~~i~~~T  163 (405)
T COG0520          97 LNLVARGLGRS-LK-------PGDEIVVSDLEHHSNIVPWQELAKRTGA---KVRVIPLDD--DGLLDLDALEKLITPKT  163 (405)
T ss_pred             HHHHHHHhhhh-hc-------CCCEEEEccCcchhhHHHHHHHHHhcCc---EEEEEecCC--CCCcCHHHHHHhcCCCc
Confidence            76554443211 11       67899999999976    6777888899   999999984  57999999999888776


Q ss_pred             hcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc
Q 037144          229 EAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD  308 (502)
Q Consensus       229 ~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~  308 (502)
                      +      +|++++.+|.+|.+.|+++|+++||++|+|+.|||||+.+.++.+-...      ++|++.+++|||+++|.|
T Consensus       164 k------lvais~vSn~tG~~~pv~~I~~la~~~ga~v~VDaaq~~~h~~idv~~l------~~Df~afsgHKwl~gP~G  231 (405)
T COG0520         164 K------LVALSHVSNVTGTVNPVKEIAELAHEHGALVLVDAAQAAGHLPIDVQEL------GCDFLAFSGHKWLLGPTG  231 (405)
T ss_pred             e------EEEEECccccccccchHHHHHHHHHHcCCEEEEECccccCccCCCchhc------CCCEEEEcccccccCCCc
Confidence            5      9999999999999999999999999999999999999999988764322      899999999999999999


Q ss_pred             ceEEEeeCchhhhhhhcCCcccccCccCCCC--C-cccccCCCcccccCCCC--CCchHHHHHHHHhcHHHHHHHHHHHH
Q 037144          309 CCCLWVKDPSCLLSTLSTNPQYLKNEATDQE--P-KEQEVGYKDWQITLCRR--FRSLKLWVVIRNFGVANLRNFIRSHV  383 (502)
Q Consensus       309 ~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~--~-~~~~~~~~~~~~~~sr~--~~al~~~~~l~~~g~~g~~~~~~~~~  383 (502)
                      +|++++|+... ..    ..++.........  . ....+....+.++.+.+  ...+.+-++++.+...|+.++.++..
T Consensus       232 iGvLy~r~~~l-~~----l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~  306 (405)
T COG0520         232 IGVLYVRKELL-EE----LEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHER  306 (405)
T ss_pred             eEEEEEchHHH-hh----cCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHH
Confidence            99999987643 21    1233322211100  0 00112222334444443  23456778888888889999999999


Q ss_pred             HHHHHHHHHHhcCCCeEEecCC---CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCc
Q 037144          384 GMAKLFERLVTSDKRFEVAFPR---NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGK  460 (502)
Q Consensus       384 ~la~~l~~~l~~~~~~~l~~~~---~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~  460 (502)
                      ++++++.+.|+++|++++++++   ..++++|.+....                             +..+...|.++|+
T Consensus       307 ~L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~~~~-----------------------------~~dv~~~L~~~gI  357 (405)
T COG0520         307 ELTEYLLEGLSELPGVEIYGPPDADRGGIVSFNVKGIH-----------------------------PHDVATLLDEKGI  357 (405)
T ss_pred             HHHHHHHHHHhcCCCeEEecCCcccCceEEEEEeCCCC-----------------------------HHHHHHHHHhCCe
Confidence            9999999999999999999875   6889999987642                             4567778888894


Q ss_pred             EEEEeeeECC---------EEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144          461 VFMTHAIVGG---------IYVLRFAAGNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       461 ~~~~~~~~~g---------~~~lR~~~~~~~t~~~di~~~~~~l~~~~~  500 (502)
                      +...+ ....         ...+|+|+. +++|++|||+++++|+++.+
T Consensus       358 ~vr~g-~~ca~p~~~~~~~~~~iR~S~~-~YNt~edid~l~~aL~~~~~  404 (405)
T COG0520         358 AVRAG-HHCAQPLHRLLGVDATIRASLH-LYNTEEDVDRLLEALKKALA  404 (405)
T ss_pred             EEEec-cccccHHHHhcCCCCceEEEEe-ecCCHHHHHHHHHHHHHHhh
Confidence            43332 1111         233999996 55777799999999998753

>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]

Probab=100.00  E-value=3.7e-34  Score=277.90  Aligned_cols=387  Identities=16%  Similarity=0.201  Sum_probs=296.2

Q ss_pred             CCCCCCCCCHHHHHHHHHHhhcCCCCCCCCC-cccccCCCCCCHHHHHHHHHHhhcCC-CCcccccChhhHHHHHHHHHH
Q 037144           47 ESAPYSPESVETILQDVQEHIVPGITHWQSP-NYFAYFPATSSVAGIVGEMLSSGFNV-VGLDWISSPAAVELENIVMDW  124 (502)
Q Consensus        47 ~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~~~~~l~~~~n~-~~~~~~~~p~~~~le~~~~~~  124 (502)
                      ..+|.+|.+-+++++.+.+..+-+...+..+ .+..|.. .+.    ...++...+|. |...-...|....+|++++++
T Consensus        54 ~~lP~~gl~~d~v~~~i~~~~~ld~~~~~~~vS~~v~~~-~~~----~~~l~~~~~~k~N~l~~d~fp~~~~~e~~~Vnm  128 (491)
T KOG1383|consen   54 FTLPSKGLPKDAVLELINDELMLDGNPRLGLASGVVYWG-EPE----LDKLIMEAYNKFNPLHPDEFPVVRKLEAECVNM  128 (491)
T ss_pred             ecCCCCCCCHHHHHHHHHHHhccCCCcccCeeeEEEecC-Ccc----hhhHHHHHHhhcCccCccccchhHHHHHHHHHH
Confidence            5789999999999999988765443322222 1222221 233    33444444444 555667889999999999999


Q ss_pred             HHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEE
Q 037144          125 LGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRA  204 (502)
Q Consensus       125 l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~  204 (502)
                      ++.||+.+..      ..|..|+|||+|.+++....+++....   .++..+.++++...|.+++|+++++++   .++.
T Consensus       129 ~~~L~~~~~~------~~g~~t~G~Ses~l~~~k~~~~~r~~~---k~I~~p~iv~~~~v~~a~eK~a~yf~v---~l~~  196 (491)
T KOG1383|consen  129 IANLFNAPSD------SCGCGTVGGSESGLAAKKSYRNRRKAQ---KGIDKPNIVTPQNVHAAFEKAARYFEV---ELRE  196 (491)
T ss_pred             HHHHhcCCcc------ccCccccccchHHHHHHHHHHHHHHhc---cCCCCccccchHHHHHHHHHHHhhEEE---EEEe
Confidence            9999999854      268899999999877777777654432   356778899999999999999999999   9999


Q ss_pred             EecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHH-hCCEEEeecccccccccCccc-
Q 037144          205 IKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQ-FGIWVHVDAAYAGSACICPEF-  282 (502)
Q Consensus       205 v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~-~g~~lhVDaA~g~~~~~~~~~-  282 (502)
                      ||+++ +++++|+..+.+.+++++      .+|++..|++++|.+||+++|+++..+ |++.+|||+|.|++..+.-.+ 
T Consensus       197 V~~~~-~~~~~D~~k~~~~i~eNt------i~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~  269 (491)
T KOG1383|consen  197 VPLDE-GDYRVDPGKVVRMIDENT------IMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLN  269 (491)
T ss_pred             eeccc-cceEecHHHHHHHhccce------EEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCccccccccccC
Confidence            99997 479999999999999886      499999999999999999999999998 999999999999988751111 


Q ss_pred             hhhh-cCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCC-c
Q 037144          283 RHFI-DGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFR-S  360 (502)
Q Consensus       283 ~~~~-~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~-a  360 (502)
                      ...+ -+..++-|++.+.||++.+|.|.|+++.|++..+...+...+.|+...            +..+|+.+||+.. .
T Consensus       270 ~~~fdFr~p~V~Sisa~~HKYGl~~~G~~~vl~r~k~~~~~q~~~~~~w~Gg~------------y~s~TlngSR~g~~v  337 (491)
T KOG1383|consen  270 EEEFDFRVPGVTSISADGHKYGLAPAGSSWVLYRNKELLPHQLFFHTDWLGGI------------YASPTLNGSRPGSQV  337 (491)
T ss_pred             ccccccCCCCceeEeeccceeeeeecCcEEEEEcccccccceEEEeccccCcc------------ccCcccccCCcccHH
Confidence            1111 134588899999999999999999999999988776666677777643            3446899999854 5


Q ss_pred             hHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccch
Q 037144          361 LKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSE  440 (502)
Q Consensus       361 l~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  440 (502)
                      .+.|+++-.+|.+||.+..+++.+.+++|+++|++++++.++++|...++.|.-..-                       
T Consensus       338 a~~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gkp~vs~~~~~s~~~-----------------------  394 (491)
T KOG1383|consen  338 AAQWAALMSLGEEGYRENTQNIVETARKLREGIENIKGIKIVGKPLVSFILFGSNDV-----------------------  394 (491)
T ss_pred             HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccccceecCCCcEEEEEccCCcc-----------------------
Confidence            689999999999999999999999999999999999999999987765555532211                       


Q ss_pred             hHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          441 EERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       441 ~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                          +.  -++.+.|.+.|..+-..+.   ...+-+|++--++.++-.++++..|+++.++
T Consensus       395 ----~i--~elsd~l~~~GW~lnalq~---P~a~Hi~vt~~~~~~~~A~~~v~Di~~~~~e  446 (491)
T KOG1383|consen  395 ----NI--FELSDLLRKKGWILNALQF---PAAIHICVTRVHAREDVADRFVADIRKVVEE  446 (491)
T ss_pred             ----ch--hhhhHHHHhcCcCccccCC---CCceEEEEEeeeccHHHHHHHHHHHHHHHHH
Confidence                11  2566777777976433322   2245555554445665567888877777654

>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]

Probab=100.00  E-value=3.9e-33  Score=271.64  Aligned_cols=340  Identities=15%  Similarity=0.125  Sum_probs=253.6

Q ss_pred             CcccccCCCCCCHHHHHHHHHH---hhc-CCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHH
Q 037144           77 PNYFAYFPATSSVAGIVGEMLS---SGF-NVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEA  152 (502)
Q Consensus        77 p~~~~~~~~~~~~~~~~~~~l~---~~~-n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a  152 (502)
                      +-||.|..+++..|.++..++.   ..+ |+.. .+..+..+..+-+++++.+++++|+++.       +.+|||||||+
T Consensus         2 miYlD~~ATTp~~~~v~~~m~~~~~~~fgNPsS-~H~~G~~A~~~ve~AR~~iA~llga~~~-------eIiFTSG~TEs   73 (386)
T COG1104           2 MIYLDNAATTPVDPEVLEAMLPYLTEVFGNPSS-LHSFGREARKAVEEAREQIAKLLGADPE-------EIIFTSGATES   73 (386)
T ss_pred             cccccccccCCCCHHHHHHHHHHHHhhcCCccc-hhHhHHHHHHHHHHHHHHHHHHhCCCCC-------eEEEecCCcHH
Confidence            4588888888888877766543   333 5444 5556777777777899999999999875       79999999999


Q ss_pred             HHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc---CCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHh
Q 037144          153 LLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV---GIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVE  229 (502)
Q Consensus       153 ~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~---Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~  229 (502)
                      |.+|+..+.....++     ..+-.|++|...|.++...++.+   |+   +|.++|++.  +|.+|+++|+++|++++ 
T Consensus        74 nNlaI~g~~~a~~~~-----~~~~HIIts~iEH~aVl~~~~~Le~~g~---~Vtyl~V~~--~G~v~~e~L~~al~~~T-  142 (386)
T COG1104          74 NNLAIKGAALAYRNA-----QKGKHIITSAIEHPAVLNTCRYLERQGF---EVTYLPVDS--NGLVDLEQLEEALRPDT-  142 (386)
T ss_pred             HHHHHHhhHHhhhcc-----cCCCeEEEcccccHHHHHHHHHHHhcCC---eEEEeCCCC--CCeEcHHHHHHhcCCCc-
Confidence            999998754322111     13457899999999999999988   88   999999986  57999999999999876 


Q ss_pred             cCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcc
Q 037144          230 AELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDC  309 (502)
Q Consensus       230 ~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~  309 (502)
                           .+|.+.+.+|.+|.+.||++|+++|+++|++||||++++.+-++.+-...      .+|.+++++||+ ++|.|+
T Consensus       143 -----~LVSim~aNnE~G~IQpI~ei~~i~k~~~i~fHvDAvQa~Gkipi~~~~~------~vD~ls~SaHK~-~GpkGi  210 (386)
T COG1104         143 -----ILVSIMHANNETGTIQPIAEIGEICKERGILFHVDAVQAVGKIPIDLEEL------GVDLLSFSAHKF-GGPKGI  210 (386)
T ss_pred             -----eEEEEEecccCeeecccHHHHHHHHHHcCCeEEEehhhhcCceecccccc------CcceEEeehhhc-cCCCce
Confidence                 48999999999999999999999999999999999999999888764322      599999999996 569999


Q ss_pred             eEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCch------HHHHHHHHhcHHHHHHHHHHHH
Q 037144          310 CCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSL------KLWVVIRNFGVANLRNFIRSHV  383 (502)
Q Consensus       310 g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al------~~~~~l~~~g~~g~~~~~~~~~  383 (502)
                      |++|+|+...+       .+.+....                .+.++|....      ++-.+++ +..+.+.....+..
T Consensus       211 GaLyv~~~~~~-------~p~i~GGg----------------QE~g~RsGTenv~~Ivg~~~A~~-~a~~~~~~~~~~~~  266 (386)
T COG1104         211 GALYVRPGVRL-------EPLIHGGG----------------QERGLRSGTENVPGIVGFGKAAE-IAVEELEEENARLR  266 (386)
T ss_pred             EEEEECCCCcc-------CceeccCc----------------CCCCCCCCCccHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence            99999655322       12333222                2234444332      2223333 24567788888999


Q ss_pred             HHHHHHHHHHhcC-CCeEEecCC--C-eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcC
Q 037144          384 GMAKLFERLVTSD-KRFEVAFPR--N-FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSG  459 (502)
Q Consensus       384 ~la~~l~~~l~~~-~~~~l~~~~--~-~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g  459 (502)
                      .++++|.+.|.+. |++.+.+.+  . .++++|.++...                             .+.+.-.|...|
T Consensus       267 ~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~gv~-----------------------------gE~ll~~L~~~g  317 (386)
T COG1104         267 KLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFPGVE-----------------------------GESLLLALDLAG  317 (386)
T ss_pred             HHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEeCCCc-----------------------------HHHHHHhccccC
Confidence            9999999999875 888887643  2 356677776532                             234555555556


Q ss_pred             cEEEEeee-----E--------------CCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          460 KVFMTHAI-----V--------------GGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       460 ~~~~~~~~-----~--------------~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      +..-++..     .              .-...||||++ ..|+++|||++++.++++.+.
T Consensus       318 I~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g-~~tt~eei~~~~~~l~~~i~~  377 (386)
T COG1104         318 IAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLG-RFTTEEEIDAAAEALKEIIKR  377 (386)
T ss_pred             eEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcC-CCCCHHHHHHHHHHHHHHHHH
Confidence            54322210     0              11468999996 678888999999999998764

>PRK04366 glycine dehydrogenase subunit 2; Validated

Probab=100.00  E-value=4.6e-30  Score=267.79  Aligned_cols=396  Identities=14%  Similarity=0.096  Sum_probs=257.7

Q ss_pred             chhHhhcCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCcccccCCCCCCHHHHHHHHHHhh-cCCCCccc---ccChh
Q 037144           38 PGYLKKRLPESAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSG-FNVVGLDW---ISSPA  113 (502)
Q Consensus        38 ~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~-~n~~~~~~---~~~p~  113 (502)
                      |+.++..-+..+|+  .|..++++++.++...+....  ..|.|.-.+...+|..+.+.+... ...+...|   ..+.+
T Consensus        35 p~~~~~~~~~~~~~--~se~~~~~~~~~l~~~n~~~~--~~~~g~G~~~~~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG  110 (481)
T PRK04366         35 PEELLRKEPPELPE--VSELEVVRHYTRLSQKNYGVD--TGFYPLGSCTMKYNPKINEKVARLPGFAELHPLQPEETVQG  110 (481)
T ss_pred             CHHHhcCCCCCCCC--CCHHHHHHHHHHHHhcCCCCC--cceecCcccCCCCCHHHHHHHHhCcchhcCCCCCChhhhhH
Confidence            44554333445676  899999999998866664322  256666533434444444444333 12344456   35667


Q ss_pred             hHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHH
Q 037144          114 AVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQ  193 (502)
Q Consensus       114 ~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~  193 (502)
                      ..++..++.+|+++++|+++        ..+..++|+.+.++++.+++.....+ |.  .++..|+++...|.++...++
T Consensus       111 ~lel~~~~~~~la~l~G~~~--------~~l~~~~GA~a~~~~l~~~r~~~~~~-Gd--~~~~~Vlv~~~~hp~~~~~~~  179 (481)
T PRK04366        111 ALELMYELQEWLKEITGMDA--------VTLQPAAGAHGELTGLLMIRAYHEAR-GD--TKRTEVIVPDSAHGTNPASAA  179 (481)
T ss_pred             HHHHHHHHHHHHHHHhCCCc--------eEEEeCcHHHHHHHHHHHHHHHhhcc-Cc--CCCCEEEEcCCccHhHHHHHH
Confidence            88999999999999999974        34666777777777666554322111 10  134578899999999999999


Q ss_pred             HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc-CChhHHHHHHHHhCCEEEeeccc
Q 037144          194 IVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV-DPLKPLCDVAKQFGIWVHVDAAY  272 (502)
Q Consensus       194 ~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i-dpl~eI~~i~~~~g~~lhVDaA~  272 (502)
                      ..|+   +++.+|++.  +|.+|+++|+++++++++      +|+++.++ ++|.+ +|+++|+++|+++|+|+|||+|+
T Consensus       180 ~~G~---~vv~v~~~~--~~~~D~e~L~~~i~~~t~------~V~v~~Pn-~tG~~~~dl~eI~~~a~~~gal~iVD~a~  247 (481)
T PRK04366        180 MAGF---KVVEIPSNE--DGLVDLEALKAAVGEDTA------ALMLTNPN-TLGLFERNILEIAEIVHEAGGLLYYDGAN  247 (481)
T ss_pred             HcCC---EEEEeecCC--CCCcCHHHHHhhcccCCe------EEEEeCCC-CccccchHHHHHHHHHHHcCCEEEEEecC
Confidence            9999   999999964  479999999999976543      67777777 89988 69999999999999999999999


Q ss_pred             ccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcc-----eEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCC
Q 037144          273 AGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDC-----CCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGY  347 (502)
Q Consensus       273 g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~-----g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~  347 (502)
                      ..+.+..-....     .++|++++++||||++|.++     |+++++++.  .+.+   ++.+.... .   ......+
T Consensus       248 ~~~~~g~~~~~~-----~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~--~~~l---p~~~v~~~-g---~~~~l~~  313 (481)
T PRK04366        248 LNAILGKARPGD-----MGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEEL--APFL---PVPVVEKD-G---DRYRLDY  313 (481)
T ss_pred             hhhhcccCCccc-----cCCCEEEEechhhcCCCCCCCCCCeeeeeehhhh--HhhC---CCCeeecc-C---Cceeecc
Confidence            655332111111     28999999999999988765     478887542  1222   11111100 0   0000001


Q ss_pred             -CcccccCCCCCC-----chHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-CCeeEEEEEeecCcch
Q 037144          348 -KDWQITLCRRFR-----SLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP-RNFSLVCFRVTPSAVM  420 (502)
Q Consensus       348 -~~~~~~~sr~~~-----al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~-~~~~~v~f~~~~~~~~  420 (502)
                       ....+...+.+.     ++++|..+..+|.+|++++.++...++++|+++|+++  +++..+ +....+.|....... 
T Consensus       314 ~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~--~~~~~~~~~~~~~~~~~~~~~~-  390 (481)
T PRK04366        314 DRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDI--YDLPYDRPCMHEFVLSGKKLKE-  390 (481)
T ss_pred             cccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhh--CcccCCCCeeEEEEEECccccc-
Confidence             111111112222     3688889999999999999999999999999999987  444322 223333343211000 


Q ss_pred             hhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeee-ECCEEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144          421 DKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAI-VGGIYVLRFAAGNSMTMESHVRAAWTVVQEHL  499 (502)
Q Consensus       421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~  499 (502)
                                         .    +....++.++|.++|+....... ......+|++++ ..++++|||+++++|+++.
T Consensus       391 -------------------~----g~~~~~v~~~L~~~Gi~~~~~~~p~~~~~~l~is~~-e~~t~edid~l~~~l~~i~  446 (481)
T PRK04366        391 -------------------T----GVRTLDIAKRLLDYGFHPPTIYFPLIVPEALMIEPT-ETESKETLDAFIAAMKQIA  446 (481)
T ss_pred             -------------------c----CCCHHHHHHHHHHCCccCCccccccccCCeEEEccc-CCCCHHHHHHHHHHHHHHH
Confidence                               0    01145677888888864321100 012457999986 4577789999999999886


Q ss_pred             Hh
Q 037144          500 EA  501 (502)
Q Consensus       500 ~~  501 (502)
                      ++
T Consensus       447 ~~  448 (481)
T PRK04366        447 EE  448 (481)
T ss_pred             HH
Confidence            54

>TIGR00461 gcvP glycine dehydrogenase (decarboxylating)

Probab=100.00  E-value=4.1e-30  Score=277.41  Aligned_cols=381  Identities=12%  Similarity=0.079  Sum_probs=266.7

Q ss_pred             CHHHHHHHHHHhhcCCCCCCCCCcccccCCCCCCHHHHHHHHHHhhcCCCCccccc-----ChhhHHHHHHHHHHHHHhc
Q 037144           55 SVETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWIS-----SPAAVELENIVMDWLGQML  129 (502)
Q Consensus        55 ~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~-----~p~~~~le~~~~~~l~~l~  129 (502)
                      |..++++.+.++-..+..-. + .|++--.. ........+++....+.....+..     +.+..+++.++..||++++
T Consensus       467 sE~e~~r~~~~L~~kn~~~~-~-~fi~lGsc-tmk~na~v~~l~~s~~ef~t~hPyqPe~~sqG~lq~i~elq~~l~elt  543 (939)
T TIGR00461       467 SETEMLRYLHRLESKDLALN-N-SMIPLGSC-TMKLNATAEMMPITWPEFSNIHPFQPSNQVEGYQELIAQLEKWLCSIT  543 (939)
T ss_pred             CHHHHHHHHHHHHhcCCCcc-c-cCCCCccC-CCccCHHHHHHHhcchhhcCcCCCCchHHhHHHHHHHHHHHHHHHHHH
Confidence            88999999998766554322 2 34443222 223333555554444333222233     3458899999999999999


Q ss_pred             CCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCC
Q 037144          130 DLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTK  209 (502)
Q Consensus       130 g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~  209 (502)
                      |+++        .++..++|+++++++++++|..... .|.  .++.+|++|..+|.+..++++..|+   +++.||++.
T Consensus       544 Gmd~--------~Sl~p~aGA~gE~agL~aiR~y~~~-rge--~~R~~vlip~saHgtnPasa~~~G~---~Vv~V~~d~  609 (939)
T TIGR00461       544 GFDA--------ISLQPNSGAQGEYAGLRVIRSYHES-RGE--NHRNICLIPVSAHGTNPASAAMAGM---QVVPVNCDQ  609 (939)
T ss_pred             CCCC--------cccCCchHHHHHHHHHHHHHHHHHh-cCC--CCCCEEEEEccccCcCHHHHHHCCC---EEEEeccCC
Confidence            9995        3678888999999999998875421 121  1567899999999999999999999   999999975


Q ss_pred             CCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC-hhHHHHHHHHhCCEEEeecccccccccCccchhhhcC
Q 037144          210 SSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP-LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDG  288 (502)
Q Consensus       210 ~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp-l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~  288 (502)
                        +|.+|+++|++++++   .+..+.+|++|+++| +|.++| |++|+++|+++|.|++||||+............    
T Consensus       610 --~G~iDle~L~~~i~~---~~~~taaV~iT~pst-~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~l~~Pg~----  679 (939)
T TIGR00461       610 --DGNIDLVDLKNKAEQ---HGDELAAVMVTYPST-HGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVGLTSPGD----  679 (939)
T ss_pred             --CCCcCHHHHHHHHhh---cCCceEEEEEEeCCc-CceecccHHHHHHHHHHcCCEEEEEecChhhCCCCCCccc----
Confidence              579999999999975   233467999999998 799977 999999999999999999999664433322222    


Q ss_pred             CCCCCeeEEccCCcCCCCCcc-----eEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCc---
Q 037144          289 VECVDSFSFNPHKWLFTTLDC-----CCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRS---  360 (502)
Q Consensus       289 ~~~aDsi~~~~hK~l~~p~~~-----g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~a---  360 (502)
                       -++|+++++.||+|+.|.|+     |++++|+.  +...+... . +... .+   ..+.  ..+.+...++.+++   
T Consensus       680 -~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~--L~~~lPg~-~-v~~t-~d---~~gr--eq~Iga~s~~~~g~a~~  748 (939)
T TIGR00461       680 -LGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSH--LIPFLPKH-D-VVSM-IT---GIGG--SKSIGSVSAAPYGSASI  748 (939)
T ss_pred             -cCCCEEEecCCccCCCCCCCCCCCeEEEEEhhh--chhhcCCC-c-cccc-cc---CCCC--ccccccccccccCcHHH
Confidence             28999999999999966555     99999854  22222111 1 1110 00   0000  01112223344555   


Q ss_pred             -hHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC----CCeeEEEEEeecCcchhhhhhcccCCCcccc
Q 037144          361 -LKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP----RNFSLVCFRVTPSAVMDKLRTKYKNGTYDQY  435 (502)
Q Consensus       361 -l~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~----~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~  435 (502)
                       ++.|+.++.+|.+|+++..+....+|+|+.++|.+  +++++.+    +...-++|++.+..                 
T Consensus       749 ~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~--~~~~l~~~~~~~~~hEfv~~~~~~~-----------------  809 (939)
T TIGR00461       749 LPISWMYIKMMGNEGLPKASVVAILNANYMATRLKD--HYPILFVGTLKHVAHECILDLRPLK-----------------  809 (939)
T ss_pred             HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhc--cCcccccCCCCceeEEEEEeccchh-----------------
Confidence             89999999999999999999999999999999987  5677654    23555788876521                 


Q ss_pred             cccchhHhhHHHHHHHHHHHHhcCcEEEEee-eECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          436 RQFSEEERTNEFNRELLESINVSGKVFMTHA-IVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       436 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                            ++.+..+.++.++|.+.|+...+.+ ...+...+|.+-   .++.+|||++++++.++.++
T Consensus       810 ------~~~g~~~~dIakrL~d~G~hapt~~~pv~g~lmiepTE---~eskeelD~f~~al~~I~~e  867 (939)
T TIGR00461       810 ------AKTGIEAIDVAKRLQDYGFHAPTLSFPVPGTLMVEPTE---SESLEELDRFCDAMIAIKEE  867 (939)
T ss_pred             ------hhcCCCHHHHHHHHHhCCeeccccCCccCCeEEEEeec---cCCHHHHHHHHHHHHHHHHH
Confidence                  1112336788899999997644422 234555666654   46788999999999888764

This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.

>PRK05367 glycine dehydrogenase; Provisional

Probab=99.97  E-value=2.3e-29  Score=276.54  Aligned_cols=380  Identities=12%  Similarity=0.068  Sum_probs=257.2

Q ss_pred             CCHHHHHHHHHHhhcCCCCCCCCCcccccCCCCCCHHHHHHHHHHhhcCCCC--ccc---ccChhhHHHHHHHHHHHHHh
Q 037144           54 ESVETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVG--LDW---ISSPAAVELENIVMDWLGQM  128 (502)
Q Consensus        54 ~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~--~~~---~~~p~~~~le~~~~~~l~~l  128 (502)
                      .|..++++.+.++-..+.....+..++|. ......|......+  ..+...  +.|   +.+.+..+++.++.+|++++
T Consensus       478 ~sE~e~~r~~~~l~~kn~~~~~~~i~lGs-ct~~~~p~~~~~~~--~~~~f~~~hP~qp~e~~qG~l~~i~e~q~~l~el  554 (954)
T PRK05367        478 HSETEMMRYLRRLEDKDLALDRSMIPLGS-CTMKLNAAAEMIPI--TWPEFANLHPFAPAEQAAGYRELIDQLEAWLAEI  554 (954)
T ss_pred             CCHHHHHHHHHHHHhcCcCcccceeeCCc-CCCcCCHHHHHHHH--hCccccccCCCChHHHHHHHHHHHHHHHHHHHHH
Confidence            48999999999987777654445566777 22333333322222  222211  111   23445789999999999999


Q ss_pred             cCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecC
Q 037144          129 LDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTT  208 (502)
Q Consensus       129 ~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~  208 (502)
                      +|++.        ..+..+||+++++.+++++|.....+ |.  .++.+|++|+.+|.|+.+++.++|+   +++.||++
T Consensus       555 tG~d~--------~sl~~~~ga~ge~agL~a~r~~~~~~-G~--~~r~~vlis~~aH~snp~sa~~~G~---~vv~v~~d  620 (954)
T PRK05367        555 TGYDA--------VSLQPNAGAQGEYAGLLAIRAYHESR-GE--GHRDVCLIPSSAHGTNPASAVMAGM---KVVVVACD  620 (954)
T ss_pred             HCCCC--------EEECccHHHHHHHHHHHHHHHHhhcc-CC--CCCCEEEEEchhhhhhHHHHHHCCC---EEEEECCC
Confidence            99984        23446678899999988777542221 11  1356899999999999999999999   99999998


Q ss_pred             CCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcC
Q 037144          209 KSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDG  288 (502)
Q Consensus       209 ~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~  288 (502)
                      .  +|.+|+++|++++++.   +..+++|+++.++|..+..+||++|+++|+++|+|+|||||+.++.+.......    
T Consensus       621 ~--~G~iD~~~L~~~i~~~---~~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~~pg~----  691 (954)
T PRK05367        621 E--NGNIDLDDLRAKAEEH---ADNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMNAQVGLARPGD----  691 (954)
T ss_pred             C--CCCcCHHHHHHHHhcc---CCCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChhhccCCCChhh----
Confidence            5  4699999999999753   124678899999988444599999999999999999999999765444332212    


Q ss_pred             CCCCCeeEEccCCcCCCCCcce-----EEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCC----C
Q 037144          289 VECVDSFSFNPHKWLFTTLDCC-----CLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRF----R  359 (502)
Q Consensus       289 ~~~aDsi~~~~hK~l~~p~~~g-----~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~----~  359 (502)
                       -++|++++++||||++|.|+|     ++++|+.  +.       +|+......     ...+....+...+.++    .
T Consensus       692 -~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~--l~-------p~lpg~~v~-----~~~~~~~~g~v~ta~~g~al~  756 (954)
T PRK05367        692 -IGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAH--LA-------PFLPGHPVQ-----IAGGETGIGAVSAAPFGSASI  756 (954)
T ss_pred             -cCCCEEEecCcccCCCCcCCCCCceEEEeeccc--cc-------ccCCCCccC-----cCCCCCCcCcchhHHHHHHHH
Confidence             289999999999998887755     8888742  21       222211100     0000000111122222    3


Q ss_pred             chHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec--C--CCeeEEEEEeecCcchhhhhhcccCCCcccc
Q 037144          360 SLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAF--P--RNFSLVCFRVTPSAVMDKLRTKYKNGTYDQY  435 (502)
Q Consensus       360 al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~--~--~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~  435 (502)
                      ++..|..++.+|.+|+++..++...+|+|+.++|++.  +++..  +  +...-++|.+.+...                
T Consensus       757 ~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~--~~~~~~~~~~~~~~e~i~~~~~~~~----------------  818 (954)
T PRK05367        757 LPISWMYIRMMGAEGLRQATEVAILNANYIAKRLKDH--YPVLYTGANGRVAHECILDLRPLKE----------------  818 (954)
T ss_pred             HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhh--cCccccCCCCCcccceEEEeecccc----------------
Confidence            3568999999999999999999999999999999874  44432  1  223445555543210                


Q ss_pred             cccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          436 RQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       436 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                             ..+..+..+.++|.+.|+...+. .+...+.+|++.+. .++++|||+++++|.++.++
T Consensus       819 -------~~g~~~~di~krL~d~G~~~~t~-~~pv~~~l~i~ptE-~~s~~elDr~~~al~~i~~e  875 (954)
T PRK05367        819 -------STGITVDDIAKRLIDYGFHAPTM-SFPVAGTLMVEPTE-SESKAELDRFCDAMIAIRAE  875 (954)
T ss_pred             -------cCCCCHHHHHHHHHHCCCeEeec-CCccCCEEEEEeee-cCCHHHHHHHHHHHHHHHHH
Confidence                   00011356788888889754442 23345678999874 57778999999999888654

>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein

Probab=99.97  E-value=3.8e-29  Score=254.90  Aligned_cols=312  Identities=14%  Similarity=0.142  Sum_probs=222.7

Q ss_pred             hHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH----
Q 037144          114 AVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ----  189 (502)
Q Consensus       114 ~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~----  189 (502)
                      ......++++++++++|.+...      .+++|+|+|+++..++.+...           +++.|+++...|.++.    
T Consensus        42 ~~~~~~~~~~~la~~~~~~~~~------~v~~~~g~t~al~~~~~~~~~-----------~gd~vl~~~~~~~~~~~~~~  104 (376)
T TIGR01977        42 ASREVEETRQLLAKLFNAPSSA------HVVFTNNATTALNIALKGLLK-----------EGDHVITTPMEHNSVARPLE  104 (376)
T ss_pred             HHHHHHHHHHHHHHHhCcCCCC------eEEEeCCHHHHHHHHHHhccC-----------CCCEEEECcchhhHHHHHHH
Confidence            3466677889999999986532      588999999988766654221           5678888888998754    


Q ss_pred             HHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEee
Q 037144          190 KAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVD  269 (502)
Q Consensus       190 ~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVD  269 (502)
                      ..++..|+   +++.++.+.  ++.+|+++|+++++++      +.+|++++++|++|.+.|+++|.++|+++|++++||
T Consensus       105 ~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~~~~~------~~~v~~~~~~n~tG~~~~~~~i~~l~~~~~~~livD  173 (376)
T TIGR01977       105 CLKEQIGV---EITIVKCDN--EGLISPERIKRAIKTN------TKLIVVSHASNVTGTILPIEEIGELAQENGIFFILD  173 (376)
T ss_pred             HHHHHcCc---EEEEEecCC--CCCcCHHHHHHhcCCC------CeEEEEECCCCCccccCCHHHHHHHHHHcCCEEEEE
Confidence            45566788   999999875  4689999999998643      348889999999999999999999999999999999


Q ss_pred             cccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCc
Q 037144          270 AAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKD  349 (502)
Q Consensus       270 aA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~  349 (502)
                      +|++.+....+...      .++|++++++|||+++|.|+|++++++...+.........+.. ...+      ......
T Consensus       174 ~a~~~g~~~~~~~~------~~~D~~~~s~~K~l~~p~g~g~l~~~~~~~~~~~~~~~~~~~~-~~~~------~~~~~~  240 (376)
T TIGR01977       174 AAQTAGVIPIDMTE------LAIDMLAFTGHKGLLGPQGTGGLYIREGIKLKPLKSGGTGSHS-ALID------QPSELP  240 (376)
T ss_pred             hhhccCccCCCchh------cCCCEEEecccccccCCCCceEEEEcCCcCcCceecCCCcccc-cccc------ccccch
Confidence            99988876554221      2799999999999999999999999877532211111000000 0000      000000


Q ss_pred             ccccCCCC--CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC----CeeEEEEEeecCcchhhh
Q 037144          350 WQITLCRR--FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR----NFSLVCFRVTPSAVMDKL  423 (502)
Q Consensus       350 ~~~~~sr~--~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~----~~~~v~f~~~~~~~~~~~  423 (502)
                      ..++.+..  ...++++.+++.+...|.+.+.++..++++++.+.|++.++++++.+.    ..++++|......     
T Consensus       241 ~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----  315 (376)
T TIGR01977       241 DRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVGVVSFTVEGID-----  315 (376)
T ss_pred             hhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCCeEEEEECCCC-----
Confidence            01111111  123567778888888899999999999999999999999999998642    3568888774321     


Q ss_pred             hhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcEEEEeeeE-----------CCEEEEEEEecCCCCcHHHHHHH
Q 037144          424 RTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKVFMTHAIV-----------GGIYVLRFAAGNSMTMESHVRAA  491 (502)
Q Consensus       424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~-----------~g~~~lR~~~~~~~t~~~di~~~  491 (502)
                                              ..++.+.|.++ |.. +..+.+           .....+|++++ ..++++||+++
T Consensus       316 ------------------------~~~~~~~L~~~~gi~-v~~g~~~~~~~~~~~g~~~~~~iRis~~-~~~t~~dv~~~  369 (376)
T TIGR01977       316 ------------------------SEEVADILDEKFDIA-TRTGLHCAPLAHKTIGTFATGTIRLSLG-YFNTEEEIEKL  369 (376)
T ss_pred             ------------------------HHHHHHHHhccCCEE-EEcccccchHHHHHhCCCCCCeEEEecC-CCCCHHHHHHH
Confidence                                    24567777776 643 332221           13468999975 56778899999


Q ss_pred             HHHHHH
Q 037144          492 WTVVQE  497 (502)
Q Consensus       492 ~~~l~~  497 (502)
                      +++|++
T Consensus       370 ~~~l~~  375 (376)
T TIGR01977       370 LEALSE  375 (376)
T ss_pred             HHHHhh
Confidence            999975

This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.

>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated

Probab=99.97  E-value=8.9e-29  Score=254.58  Aligned_cols=356  Identities=15%  Similarity=0.113  Sum_probs=242.2

Q ss_pred             cccccCCCCCCHHHHHHHHHHhhc-----CCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHH
Q 037144           78 NYFAYFPATSSVAGIVGEMLSSGF-----NVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEA  152 (502)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~l~~~~-----n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a  152 (502)
                      .||++-..++.+..++ +.+..++     |.....+..++.+.....++++.+++++|.++.      ...+||+|+|++
T Consensus        25 iYld~a~~~~~~~~v~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~------~~v~~t~g~t~~   97 (406)
T PRK09295         25 AYLDSAASAQKPSQVI-DAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSA------EELVFVRGTTEG   97 (406)
T ss_pred             EEEeCcccccCCHHHH-HHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCC------CeEEEeCCHHHH
Confidence            6888877666555544 4443333     222233444556677777899999999998422      168999999999


Q ss_pred             HHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh----HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHH
Q 037144          153 LLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA----FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDV  228 (502)
Q Consensus       153 ~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s----~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~  228 (502)
                      +..++........+       +++.|+++...|.+    +...++..|+   +++.+|+++  ++.+|+++|++++++++
T Consensus        98 l~~~~~~~~~~~~~-------~gd~vl~~~~~~~s~~~~~~~~~~~~g~---~v~~v~~~~--~~~~d~~~l~~~i~~~t  165 (406)
T PRK09295         98 INLVANSWGNSNVR-------AGDNIIISEMEHHANIVPWQMLCARVGA---ELRVIPLNP--DGTLQLETLPALFDERT  165 (406)
T ss_pred             HHHHHHHhhhhcCC-------CcCEEEECcchhhHHHHHHHHHHHHcCc---EEEEEecCC--CCCCCHHHHHHhcCCCc
Confidence            87665543211111       56788999988875    4556778899   999999875  46899999999986543


Q ss_pred             hcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc
Q 037144          229 EAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD  308 (502)
Q Consensus       229 ~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~  308 (502)
                            .+|++++++|++|.+.|+++|+++|+++|++++||++|+.+..+.+- ..     .++|++++++||+ ++|.|
T Consensus       166 ------~lv~l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~~-~~-----~~~D~~~~s~~K~-~gp~G  232 (406)
T PRK09295        166 ------RLLAITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMHHPVDV-QA-----LDCDFYVFSGHKL-YGPTG  232 (406)
T ss_pred             ------EEEEEecchhcccccCCHHHHHHHHHHcCCEEEEEcccccCccccCc-hh-----cCCCEEEeehhhc-cCCCC
Confidence                  48999999999999999999999999999999999999877655432 11     1789999999995 56889


Q ss_pred             ceEEEeeCchhhhhhhcCCcccccCccCCCC-CcccccCC--CcccccCCCC--CCchHHHHHHHHhcHHHHHHHHHHHH
Q 037144          309 CCCLWVKDPSCLLSTLSTNPQYLKNEATDQE-PKEQEVGY--KDWQITLCRR--FRSLKLWVVIRNFGVANLRNFIRSHV  383 (502)
Q Consensus       309 ~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~-~~~~~~~~--~~~~~~~sr~--~~al~~~~~l~~~g~~g~~~~~~~~~  383 (502)
                      +|++++++.. +. .+   +++......... .......+  ....++.+.+  ...+++..+++.+...|++++.++..
T Consensus       233 ~G~l~~~~~~-~~-~~---~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~  307 (406)
T PRK09295        233 IGILYVKEAL-LQ-EM---PPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQ  307 (406)
T ss_pred             cEEEEEchHh-Hh-hC---CCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence            9999987552 21 11   222221110000 00000000  1112232322  12357778888777778888899999


Q ss_pred             HHHHHHHHHHhcCCCeEEecC-CCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEE
Q 037144          384 GMAKLFERLVTSDKRFEVAFP-RNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVF  462 (502)
Q Consensus       384 ~la~~l~~~l~~~~~~~l~~~-~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~  462 (502)
                      ++++++.+.|+++++++++.+ ...++++|.++...                             ...+.+.|.+.|+.+
T Consensus       308 ~l~~~l~~~l~~~~~~~~~~~~~~~~iv~~~~~~~~-----------------------------~~~~~~~L~~~gI~v  358 (406)
T PRK09295        308 NLMHYALSQLESVPDLTLYGPQNRLGVIAFNLGKHH-----------------------------AYDVGSFLDNYGIAV  358 (406)
T ss_pred             HHHHHHHHHHhcCCCEEEeCCCCCceEEEEEECCcC-----------------------------HHHHHHHHHhCCeEE
Confidence            999999999999999999865 24678888875321                             224555566667543


Q ss_pred             EEeee--------ECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144          463 MTHAI--------VGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       463 ~~~~~--------~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~  500 (502)
                      .++..        .+..+++|+|+. ++++++|||+++++|+++..
T Consensus       359 ~~g~~c~~~~~~~~~~~~~iRiS~~-~ynt~~did~l~~~l~~i~~  403 (406)
T PRK09295        359 RTGHHCAMPLMAYYNVPAMCRASLA-MYNTHEEVDRLVAGLQRIHR  403 (406)
T ss_pred             eccccchHHHHHHHCCCCEEEEEcc-CCCCHHHHHHHHHHHHHHHH
Confidence            22210        112358999985 66888899999999998754

>TIGR03402 FeS_nifS cysteine desulfurase NifS

Probab=99.97  E-value=1.3e-28  Score=251.32  Aligned_cols=339  Identities=12%  Similarity=0.076  Sum_probs=232.4

Q ss_pred             ccccCCCCCCHHHHHHHHHHhhcC----CCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHH
Q 037144           79 YFAYFPATSSVAGIVGEMLSSGFN----VVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALL  154 (502)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~l~~~~n----~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~  154 (502)
                      ||++...++.++.+ .+.+...+.    +....+..++.+..+.+++++++++++|.+.+       .++||+|+|+++.
T Consensus         2 yld~aa~~~~~~~v-~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-------~i~~t~~~t~a~~   73 (379)
T TIGR03402         2 YLDNNATTRVDPEV-LEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPD-------EIIFTSGGTESDN   73 (379)
T ss_pred             cCCCcCCCCCCHHH-HHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCC-------eEEEeCcHHHHHH
Confidence            66776666655554 444433331    11112223345667777899999999998754       5899999999998


Q ss_pred             HHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHH---HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcC
Q 037144          155 CTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQ---IVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAE  231 (502)
Q Consensus       155 ~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~---~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g  231 (502)
                      .++.......        .++++|+++...|+++.....   ..|+   +++.+|+++  ++.+|+++|++++++++   
T Consensus        74 ~al~~~~~~~--------~~~~~vv~~~~~~~s~~~~~~~~~~~G~---~v~~v~~~~--~g~~~~~~l~~~i~~~~---  137 (379)
T TIGR03402        74 TAIKSALAAQ--------PEKRHIITTAVEHPAVLSLCQHLEKQGY---KVTYLPVDE--EGRLDLEELRAAITDDT---  137 (379)
T ss_pred             HHHHHHHHhc--------CCCCeEEEcccccHHHHHHHHHHHHcCC---EEEEEccCC--CCcCCHHHHHHhcCCCc---
Confidence            8887664310        035688889999988765443   3588   999999875  46899999999996543   


Q ss_pred             CccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceE
Q 037144          232 LIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCC  311 (502)
Q Consensus       232 ~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~  311 (502)
                         .+|++++++|++|.+.|+++|+++|+++|+++|||++++.+..+.+-..      .++|++++++|| +++|.|+|+
T Consensus       138 ---~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~~~~~g~~~~~~~~------~~~D~~~~s~~K-~~gp~G~g~  207 (379)
T TIGR03402       138 ---ALVSVMWANNETGTIFPIEEIGEIAKERGALFHTDAVQAVGKIPIDLKE------MNIDMLSLSGHK-LHGPKGVGA  207 (379)
T ss_pred             ---EEEEEEcccCCeeecccHHHHHHHHHHcCCEEEEECcccccccccCccc------CCCCEEEEcHHH-cCCCCceEE
Confidence               4888899999999999999999999999999999999987766544221      279999999999 667999999


Q ss_pred             EEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCC-C-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHH
Q 037144          312 LWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRR-F-RSLKLWVVIRNFGVANLRNFIRSHVGMAKLF  389 (502)
Q Consensus       312 ~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~-~-~al~~~~~l~~~g~~g~~~~~~~~~~la~~l  389 (502)
                      +++++...+      .+ ++......            ...+.+.. . ..+++..+++.. .++++++.++..++++++
T Consensus       208 l~v~~~~~~------~p-~~~g~~~~------------~~~~~gt~~~~~~~~l~~al~~~-~~~~~~~~~~~~~l~~~l  267 (379)
T TIGR03402       208 LYIRKGTRF------RP-LLRGGHQE------------RGRRAGTENVPGIVGLGKAAELA-TEHLEEENTRVRALRDRL  267 (379)
T ss_pred             EEECCCCCC------CC-cccCCccC------------CCcCCCCccHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHH
Confidence            999765311      11 11111000            00111111 1 123444555543 457788888999999999


Q ss_pred             HHHHhc-CCCeEEecCCC---eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEe
Q 037144          390 ERLVTS-DKRFEVAFPRN---FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTH  465 (502)
Q Consensus       390 ~~~l~~-~~~~~l~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~  465 (502)
                      ++.|++ +|++++..++.   .+++.|.+....                             ..++.+.|.++|+.+.++
T Consensus       268 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~l~~~gI~v~~g  318 (379)
T TIGR03402       268 EAGLLARIPDARLNGDPTKRLPNTVNISFEYIE-----------------------------GEAILLLLDMEGICASSG  318 (379)
T ss_pred             HHHHHhhCCCEEEeCCCccCCCCEEEEEecCCC-----------------------------HHHHHHhhccCCEEEEch
Confidence            999986 89999886432   346777664321                             235566666667643322


Q ss_pred             eeE-------------------CCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          466 AIV-------------------GGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       466 ~~~-------------------~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      ...                   ...+.+|+|+. +.|+++|||++++.|+++++.
T Consensus       319 ~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~-~~~t~~di~~~~~~l~~~~~~  372 (379)
T TIGR03402       319 SACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLS-RYNTEEDIDYVLEVLPPIIAR  372 (379)
T ss_pred             hhcCCCCCCcCHHHHHcCCChhhcCceEEEEcC-CCCCHHHHHHHHHHHHHHHHH
Confidence            110                   01368999985 668888999999999987654

Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.

>PRK00451 glycine dehydrogenase subunit 1; Validated

Probab=99.97  E-value=7.5e-29  Score=258.24  Aligned_cols=385  Identities=12%  Similarity=0.088  Sum_probs=249.4

Q ss_pred             CchhHhhcCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCcccccCCCCCCHHHHHHHHHHh-----hcCCCCcccccC
Q 037144           37 EPGYLKKRLPESAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSS-----GFNVVGLDWISS  111 (502)
Q Consensus        37 ~~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~-----~~n~~~~~~~~~  111 (502)
                      -|++++...+..+|+++ |.+++++++.+....+.....|++++|....+...|..+.+.+..     .++++...  .+
T Consensus        31 ~p~~~~~~~~~~lp~~~-~~~~v~~~~~~~~~~~~~~~~~~~~lg~g~~~~~~p~~~~~~~~~~~~~~~y~~~~~~--~~  107 (447)
T PRK00451         31 IPEELRLKRPLDLPPGL-SEMELLRHLRELAAKNKTAEEYPSFLGAGAYDHYIPAVVDHIISRSEFYTAYTPYQPE--IS  107 (447)
T ss_pred             CCHHHHhCCCCCCCCCC-CHHHHHHHHHHHHhcCCCcCcCcccCcccccCCcCcHHHHHHHhchhHHHhcCCCCCc--cc
Confidence            37788888888899975 999999999987755554445788888543333344444333211     23443322  24


Q ss_pred             hhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHH
Q 037144          112 PAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKA  191 (502)
Q Consensus       112 p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a  191 (502)
                      ++..+...+...|+++++|++..       .+++|+|||+++. ++..++...         +++.|++++..|.++.++
T Consensus       108 ~g~~~~~~e~~~~la~l~g~~~~-------~v~~~~g~t~~~~-~~~~a~~~~---------~g~~Vlv~~~~~~~~~~~  170 (447)
T PRK00451        108 QGTLQAIFEYQTMICELTGMDVA-------NASMYDGATALAE-AALMAVRIT---------KRKKVLVSGAVHPEYREV  170 (447)
T ss_pred             hHHHHHHHHHHHHHHHHhCCCcc-------eEEecCcHHHHHH-HHHHHHHhc---------CCCEEEEeCccCHHHHHH
Confidence            55666777778899999999864       5789999997654 444443210         567888999999998887


Q ss_pred             HHH----cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEE
Q 037144          192 AQI----VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVH  267 (502)
Q Consensus       192 a~~----~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lh  267 (502)
                      ++.    .|+   +++.+|+++  + .+|+++|+++|++++      .+|+++.+ |++|.++|+++|+++|+++|+|++
T Consensus       171 ~~~~~~~~G~---~~~~v~~~~--~-~~d~~~l~~~i~~~t------~~v~l~~p-n~tG~v~~l~~I~~~a~~~~~~~i  237 (447)
T PRK00451        171 LKTYLKGQGI---EVVEVPYED--G-VTDLEALEAAVDDDT------AAVVVQYP-NFFGVIEDLEEIAEIAHAGGALFI  237 (447)
T ss_pred             HHHHHHhCCc---EEEEecCCC--C-CCCHHHHHHhcCCCe------EEEEEECC-CCCCeeCCHHHHHHHHHHCCCEEE
Confidence            665    578   999999875  4 899999999996544      37777777 789999999999999999999999


Q ss_pred             e--ecccccccccCccchhhhcCCCCCCeeEEccCCc-----CCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCC
Q 037144          268 V--DAAYAGSACICPEFRHFIDGVECVDSFSFNPHKW-----LFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEP  340 (502)
Q Consensus       268 V--DaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~-----l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~  340 (502)
                      |  |... .+.+..+  ..     .++|+++.+.|||     +++| ++|++++++.. .. .+.   +.+.........
T Consensus       238 v~~d~~~-~g~~~~~--~~-----~~~D~~~~s~~k~~~~~~~~Gp-g~G~l~~~~~~-~~-~~~---~~~~g~~~~~~~  303 (447)
T PRK00451        238 VGVDPVS-LGLLKPP--GE-----YGADIVVGEGQPLGIPLSFGGP-YLGFFATRKKL-VR-QMP---GRLVGETVDADG  303 (447)
T ss_pred             EEcChHH-hccCCCc--cc-----CCCCEEEECCCcCCCCCCCCCC-CchHHHhhHHH-Hh-hCC---CCEeeeecccCC
Confidence            8  6443 2222212  11     2899999999997     4445 78888876532 22 111   111000000000


Q ss_pred             c----------ccccCCCccccc-CCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCee
Q 037144          341 K----------EQEVGYKDWQIT-LCRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFS  408 (502)
Q Consensus       341 ~----------~~~~~~~~~~~~-~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~  408 (502)
                      .          .........+.. +++. ..+++.+.+++.++.+|++++.++..++++++.+.|+++++++++..+.+.
T Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~  383 (447)
T PRK00451        304 KRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIGGVELFDGPFFN  383 (447)
T ss_pred             CeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCCEEecCCCeEE
Confidence            0          000000000000 0000 011344445677899999999999999999999999999899987333334


Q ss_pred             EEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEE-EEeeeE--CCEEEEEEEecCCCCcH
Q 037144          409 LVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVF-MTHAIV--GGIYVLRFAAGNSMTME  485 (502)
Q Consensus       409 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~-~~~~~~--~g~~~lR~~~~~~~t~~  485 (502)
                      .+++.+...                              ..++.++|.++|.+. +....+  ....++|++++. .+++
T Consensus       384 ~~~v~~~~~------------------------------~~~~~~~L~~~gi~~~~~~~~~~~~~~~~~rvs~~~-~~t~  432 (447)
T PRK00451        384 EFVVRLPKP------------------------------AEEVNEALLEKGILGGYDLGRYYPELGNHLLVCVTE-KRTK  432 (447)
T ss_pred             EEEEecCCC------------------------------HHHHHHHHHhcCCCCCcccccccCCcCCEEEEecCC-CCCH
Confidence            444544211                              245677777777641 111111  113589999864 4677


Q ss_pred             HHHHHHHHHHHHHH
Q 037144          486 SHVRAAWTVVQEHL  499 (502)
Q Consensus       486 ~di~~~~~~l~~~~  499 (502)
                      ++|++++++|+++.
T Consensus       433 e~i~~l~~~L~~~~  446 (447)
T PRK00451        433 EDIDALVAALGEVL  446 (447)
T ss_pred             HHHHHHHHHHHHHh
Confidence            79999999998764

>PRK10874 cysteine sulfinate desulfinase; Provisional

Probab=99.97  E-value=2.2e-28  Score=251.33  Aligned_cols=358  Identities=15%  Similarity=0.105  Sum_probs=243.8

Q ss_pred             CcccccCCCCCCHHHHHHHHHHhhcCCC-----CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchH
Q 037144           77 PNYFAYFPATSSVAGIVGEMLSSGFNVV-----GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCE  151 (502)
Q Consensus        77 p~~~~~~~~~~~~~~~~~~~l~~~~n~~-----~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~  151 (502)
                      ..||++...++.+.. +.+.+..++...     ...+..+....+...++++.+++++|.++.      ..+++|+|+|+
T Consensus        20 ~~yld~a~~~~~~~~-v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~------~~i~~~~~~t~   92 (401)
T PRK10874         20 GVYLDSAATALKPQA-VIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDA------KNIVWTRGTTE   92 (401)
T ss_pred             eEEEeCCcccCCCHH-HHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCC------CEEEEECCHHH
Confidence            358888776665444 444444444221     122333455667777899999999999422      16889999999


Q ss_pred             HHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh----HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHH
Q 037144          152 ALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA----FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLD  227 (502)
Q Consensus       152 a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s----~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~  227 (502)
                      ++..++........       .+++.|++++..|++    +.+.++..|+   +++.+|++.  ++.+|+++++++++++
T Consensus        93 ~i~~~~~~~~~~~~-------~~gd~vl~~~~~~~s~~~~~~~~~~~~g~---~v~~v~~~~--~~~~d~~~l~~~i~~~  160 (401)
T PRK10874         93 SINLVAQSYARPRL-------QPGDEIIVSEAEHHANLVPWLMVAQQTGA---KVVKLPLGA--DRLPDVDLLPELITPR  160 (401)
T ss_pred             HHHHHHHHhhhccC-------CCcCEEEECCcchHHHHHHHHHHHHHhCC---EEEEEecCC--CCcCCHHHHHHhcCcC
Confidence            88666554421000       156789999999976    5567788899   999999875  4689999999999765


Q ss_pred             HhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC
Q 037144          228 VEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL  307 (502)
Q Consensus       228 ~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~  307 (502)
                      +      .+|++++++|+||.+.|+++|+++|+++|++++||++|+.+..+.+- ..    + ++|++++++||+ ++|.
T Consensus       161 t------~lv~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~~~~~~-~~----~-~~d~~~~s~~K~-~gp~  227 (401)
T PRK10874        161 T------RILALGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVHFPADV-QA----L-DIDFYAFSGHKL-YGPT  227 (401)
T ss_pred             c------EEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEECCcccccccCCc-hh----c-CCCEEEEecccc-cCCC
Confidence            4      38889999999999999999999999999999999999766554331 11    1 689999999995 4688


Q ss_pred             cceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCC--CcccccCCCC--CCchHHHHHHHHhcHHHHHHHHHHHH
Q 037144          308 DCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGY--KDWQITLCRR--FRSLKLWVVIRNFGVANLRNFIRSHV  383 (502)
Q Consensus       308 ~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~--~~~~~~~sr~--~~al~~~~~l~~~g~~g~~~~~~~~~  383 (502)
                      |+|++++++. .+. .+   .++..............+.+  ..+.++.+.+  ...+++..++..+...|+.+..++..
T Consensus       228 G~G~l~~~~~-~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~  302 (401)
T PRK10874        228 GIGVLYGKSE-LLE-AM---SPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSR  302 (401)
T ss_pred             ccEEEEEchH-HHh-cC---CCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence            9999987654 222 11   12221100000000000000  1112222222  13456777777777778888888999


Q ss_pred             HHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEE
Q 037144          384 GMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFM  463 (502)
Q Consensus       384 ~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~  463 (502)
                      ++++++.+.|+++|+++++.++..++++|.+.+..                             ..++.+.|.++|.++.
T Consensus       303 ~l~~~l~~~l~~~~g~~~~~~~~~~i~~~~~~~~~-----------------------------~~~~~~~L~~~gI~v~  353 (401)
T PRK10874        303 SLATLAEDALAKLPGFRSFRCQDSSLLAFDFAGVH-----------------------------HSDLVTLLAEYGIALR  353 (401)
T ss_pred             HHHHHHHHHHhcCCCEEEeCCCCCcEEEEEECCcC-----------------------------HHHHHHHHHHCCcEEe
Confidence            99999999999999999887777788888764321                             2356667777787554


Q ss_pred             EeeeE--------CCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          464 THAIV--------GGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       464 ~~~~~--------~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      ++...        +..+++|+|++.+ ++++||++++++|+++++.
T Consensus       354 ~g~~~~~~~~~~~g~~~~iRiS~~~~-nt~edid~ll~al~~~~~~  398 (401)
T PRK10874        354 AGQHCAQPLLAALGVTGTLRASFAPY-NTQSDVDALVNAVDRALEL  398 (401)
T ss_pred             ccccchHHHHHHhCCCCEEEEEeccc-CCHHHHHHHHHHHHHHHHH
Confidence            43221        2246899999755 6778999999999988764

>TIGR01979 sufS cysteine desulfurases, SufS subfamily

Probab=99.97  E-value=2.5e-28  Score=251.26  Aligned_cols=358  Identities=16%  Similarity=0.115  Sum_probs=239.9

Q ss_pred             cccccCCCCCCHHHHHHHHHHhhc-----CCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHH
Q 037144           78 NYFAYFPATSSVAGIVGEMLSSGF-----NVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEA  152 (502)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~l~~~~-----n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a  152 (502)
                      .||++-..++.+.. +.+.+...+     |+....+..++.......++++.+++++|.++..      .+++|+|+|++
T Consensus        20 ~yld~~~~~~~p~~-v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~~------~v~~~~g~t~~   92 (403)
T TIGR01979        20 VYLDSAATSQKPQQ-VIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASDE------EIVFTRGTTES   92 (403)
T ss_pred             EEEeCccccCCCHH-HHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCCC------eEEEeCCHHHH
Confidence            56777655554443 445554443     2222223334445556668889999999997321      68999999998


Q ss_pred             HHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh----HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHH
Q 037144          153 LLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA----FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDV  228 (502)
Q Consensus       153 ~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s----~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~  228 (502)
                      +..++.+......+       +++.|+++...|++    +.++++..|+   +++.+|+++  ++.+|+++|+++++++ 
T Consensus        93 l~~~~~~~~~~~~~-------~g~~vl~~~~~~~s~~~~~~~~~~~~g~---~~~~v~~~~--~~~~~~~~l~~~i~~~-  159 (403)
T TIGR01979        93 INLVAYSWGDSNLK-------AGDEIVISEMEHHANIVPWQLLAERTGA---TLKFIPLDD--DGTLDLDDLEKLLTEK-  159 (403)
T ss_pred             HHHHHHHhhhhcCC-------CCCEEEECcchhhHHHHHHHHHHHhcCc---EEEEEecCC--CCCCCHHHHHHHhccC-
Confidence            76655543221111       56789999999876    3466778899   999999984  4689999999998654 


Q ss_pred             hcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc
Q 037144          229 EAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD  308 (502)
Q Consensus       229 ~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~  308 (502)
                           +.+|++++++|++|.+.|+++|+++|+++|+++|||++|+.+..+.+- ..     .++|++++++||++ +|.|
T Consensus       160 -----~~lv~~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~g~~~~~~-~~-----~~~d~~~~s~~K~~-gp~G  227 (403)
T TIGR01979       160 -----TKLVAITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDGAQAVPHMPVDV-QA-----LDCDFYVFSGHKMY-GPTG  227 (403)
T ss_pred             -----CeEEEEEcccccccccCCHHHHHHHHHHcCCEEEEEchhhcCccccCc-cc-----cCCCEEEEeccccc-CCCC
Confidence                 348889999999999999999999999999999999999877654321 11     16899999999976 5889


Q ss_pred             ceEEEeeCchhhhhhhcCCcccccCccCCC-C-CcccccCCCcccccCCCC-C-CchHHHHHHHHhcHHHHHHHHHHHHH
Q 037144          309 CCCLWVKDPSCLLSTLSTNPQYLKNEATDQ-E-PKEQEVGYKDWQITLCRR-F-RSLKLWVVIRNFGVANLRNFIRSHVG  384 (502)
Q Consensus       309 ~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~-~-~~~~~~~~~~~~~~~sr~-~-~al~~~~~l~~~g~~g~~~~~~~~~~  384 (502)
                      +|++++++. .+. .+   .++........ . .....+....+.++.+.+ . ..++++.+++.+...|++++.++..+
T Consensus       228 ~g~l~~~~~-~~~-~~---~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~  302 (403)
T TIGR01979       228 IGVLYGKEE-LLE-QM---PPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHE  302 (403)
T ss_pred             ceEEEEchH-HHh-cC---CCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence            999988754 221 11   11211110000 0 000000001112222222 1 23566777877766688889999999


Q ss_pred             HHHHHHHHHhcCCCeEEecCC----CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCc
Q 037144          385 MAKLFERLVTSDKRFEVAFPR----NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGK  460 (502)
Q Consensus       385 la~~l~~~l~~~~~~~l~~~~----~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~  460 (502)
                      +++++.+.|+++++++++.++    ..++++|.+.+..                             ..++.+.|.+.|+
T Consensus       303 l~~~l~~~l~~~~g~~~~~~~~~~~~~~~v~~~~~~~~-----------------------------~~~~~~~L~~~gI  353 (403)
T TIGR01979       303 LTAYALERLGEIPGLRIYGPRDAEDRGGIISFNVEGVH-----------------------------PHDVGTILDEEGI  353 (403)
T ss_pred             HHHHHHHHHhcCCCEEEeCCCCccccCceEEEEeCCcC-----------------------------HHHHHHHHhhCCE
Confidence            999999999999999998653    3678888874321                             2345566666775


Q ss_pred             EEEEee--------eECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHhC
Q 037144          461 VFMTHA--------IVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEAF  502 (502)
Q Consensus       461 ~~~~~~--------~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~~  502 (502)
                      ..-++.        .+...+++|+|++ +.++++||++++++|+++.+.|
T Consensus       354 ~v~~g~~~~~~~~~~~~~~~~iRiS~~-~~~t~~di~~l~~~l~~~~~~~  402 (403)
T TIGR01979       354 AVRSGHHCAQPLMRRFGVPATCRASFY-IYNTEEDIDALVEALKKVRKFF  402 (403)
T ss_pred             EEcchhhhhHHHHHHhCCCCEEEEEec-cCCCHHHHHHHHHHHHHHHHHh
Confidence            432211        1122468999986 6678889999999999987654

This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.

>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA

Probab=99.97  E-value=2.2e-28  Score=251.14  Aligned_cols=357  Identities=14%  Similarity=0.068  Sum_probs=241.6

Q ss_pred             cccccCCCCCCHHHHHHHHHHhhcCC---C--CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHH
Q 037144           78 NYFAYFPATSSVAGIVGEMLSSGFNV---V--GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEA  152 (502)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~l~~~~n~---~--~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a  152 (502)
                      .||++-..++.+. .+.+.+..+++.   +  ...+..++...+...++++.+++++|.++..      ..++|+|+|++
T Consensus        18 iyld~a~~~~~p~-~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~------~i~~t~g~t~~   90 (398)
T TIGR03392        18 VYLDSAATALKPQ-AVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDAE------NIVWTRGTTES   90 (398)
T ss_pred             EEeeCccccCCCH-HHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCC------eEEEeCChHHH
Confidence            5888876665444 455555554421   1  1223334455666778999999999985321      68999999999


Q ss_pred             HHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh----HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHH
Q 037144          153 LLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA----FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDV  228 (502)
Q Consensus       153 ~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s----~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~  228 (502)
                      +..++.+......       .+++.|++++..|++    +...++..|+   +++.+|++.  ++.+|+++|++++++++
T Consensus        91 l~~~~~~~~~~~~-------~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~---~v~~v~~~~--~~~~~~~~l~~~i~~~t  158 (398)
T TIGR03392        91 INLVAQSYARPRL-------QPGDEIIVSEAEHHANLIPWLMVAQQTGA---KVVKLPIGA--DLLPDIRQLPELLTPRT  158 (398)
T ss_pred             HHHHHHHhhhccC-------CCCCEEEECCcchhHHHHHHHHHHHHcCc---EEEEEecCC--CCCcCHHHHHHHhccCc
Confidence            8776655421000       156789999999976    4556788899   999999975  46899999999997654


Q ss_pred             hcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc
Q 037144          229 EAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD  308 (502)
Q Consensus       229 ~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~  308 (502)
                            .+|+++++++++|.+.|+++|+++|+++|++++||++|+.+....+. ..    + ++|++++++||++ +|.|
T Consensus       159 ------~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~-~~----~-~~d~~~~s~~K~~-gp~G  225 (398)
T TIGR03392       159 ------RILALGQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGVVHGPPDV-QA----L-DIDFYAFSGHKLY-GPTG  225 (398)
T ss_pred             ------eEEEEECccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCCCCCh-hh----c-CCCEEEEeccccc-CCCc
Confidence                  37888999999999999999999999999999999999766554321 11    1 6899999999955 5788


Q ss_pred             ceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCC--CcccccCCCCC--CchHHHHHHHHhcHHHHHHHHHHHHH
Q 037144          309 CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGY--KDWQITLCRRF--RSLKLWVVIRNFGVANLRNFIRSHVG  384 (502)
Q Consensus       309 ~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~--~~~~~~~sr~~--~al~~~~~l~~~g~~g~~~~~~~~~~  384 (502)
                      +|++++++. .+. .+   .++..............+.+  ....++.+.+.  ..+++..+++.+...|+.++.++..+
T Consensus       226 ~G~l~~~~~-~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~  300 (398)
T TIGR03392       226 IGVLYGKTE-LLE-AM---PPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVS  300 (398)
T ss_pred             eEEEEEcHH-HHh-hC---CCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence            999987644 222 11   12221110000000000000  01122222221  33577778877767788888899999


Q ss_pred             HHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEE
Q 037144          385 MAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMT  464 (502)
Q Consensus       385 la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~  464 (502)
                      +++++.+.|+++|++++..++..++++|.+.+..                             ...+.+.|.++|+.+.+
T Consensus       301 l~~~l~~~l~~l~g~~~~~~~~~~i~~~~~~~~~-----------------------------~~~l~~~L~~~gI~v~~  351 (398)
T TIGR03392       301 LADLAEERLAQLPGFRSFRCPGSSLLAFDFAGVH-----------------------------HSDLAALLAESGIALRA  351 (398)
T ss_pred             HHHHHHHHHhcCCCeEEeCCCCCcEEEEEeCCcC-----------------------------HHHHHHHHHhCCEEEec
Confidence            9999999999999999886666778888764321                             23566667667764433


Q ss_pred             eeeE--------CCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          465 HAIV--------GGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       465 ~~~~--------~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      +...        +..+++|+|++ +.++++||++++++|+++++.
T Consensus       352 g~~~~~~~~~~~g~~~~iRvS~~-~~~t~~ei~~l~~~l~~~~~~  395 (398)
T TIGR03392       352 GQHCAQPLMAALGVSGTLRASFA-PYNTQQDVDALVDAVGAALEL  395 (398)
T ss_pred             CccchHHHHHHhCCCCEEEEEee-ccCCHHHHHHHHHHHHHHHHH
Confidence            2211        12468999986 457788999999999988764

Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.

>cd06453 SufS_like Cysteine desulfurase (SufS)-like

Probab=99.97  E-value=1.9e-28  Score=249.59  Aligned_cols=349  Identities=14%  Similarity=0.111  Sum_probs=235.5

Q ss_pred             ccccCCCCCCHHHHHHHHHHhhc-----CCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHH
Q 037144           79 YFAYFPATSSVAGIVGEMLSSGF-----NVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEAL  153 (502)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~l~~~~-----n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~  153 (502)
                      ||++-..++.++..+. .+...+     |+....+..++.......++++++++++|.+...      .+++|+|+|+++
T Consensus         2 yl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~------~v~~~~g~t~a~   74 (373)
T cd06453           2 YLDNAATSQKPQPVID-AIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSPD------EIIFTRNTTEAI   74 (373)
T ss_pred             cccCccccCCCHHHHH-HHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCC------eEEEeCCHHHHH
Confidence            4555544444444443 333332     2222344556677788888999999999987321      588999999998


Q ss_pred             HHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhH----HHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHh
Q 037144          154 LCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAF----QKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVE  229 (502)
Q Consensus       154 ~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~----~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~  229 (502)
                      ..++.+....        ..+++.|+++...|++.    ...++..|+   +++.|+++.  ++.+|+++|++++.++  
T Consensus        75 ~~~~~~l~~~--------~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~l~~~--  139 (373)
T cd06453          75 NLVAYGLGRA--------NKPGDEIVTSVMEHHSNIVPWQQLAERTGA---KLKVVPVDD--DGQLDLEALEKLLTER--  139 (373)
T ss_pred             HHHHHHhhhc--------CCCCCEEEECcchhHHHHHHHHHHHhhcCc---EEEEeecCC--CCCcCHHHHHHHhcCC--
Confidence            7777665431        01456788999999884    445667898   999999874  5689999999999753  


Q ss_pred             cCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcc
Q 037144          230 AELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDC  309 (502)
Q Consensus       230 ~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~  309 (502)
                          +.+|++++++|++|.+.|+++|+++|+++|+|+|+|++++.+..+.+ ...     .++|++++++|||++. .++
T Consensus       140 ----~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~-~~~-----~~~d~~~~s~~K~~~~-~g~  208 (373)
T cd06453         140 ----TKLVAVTHVSNVLGTINPVKEIGEIAHEAGVPVLVDGAQSAGHMPVD-VQD-----LGCDFLAFSGHKMLGP-TGI  208 (373)
T ss_pred             ----ceEEEEeCcccccCCcCCHHHHHHHHHHcCCEEEEEhhhhcCceeee-ccc-----cCCCEEEeccccccCC-CCc
Confidence                34888999999999999999999999999999999999977655432 111     1789999999999987 678


Q ss_pred             eEEEeeCchhhhhhhcCCcccccCccCCCC--CcccccCCCcccccCCCC--CCchHHHHHHHHhcHHHHHHHHHHHHHH
Q 037144          310 CCLWVKDPSCLLSTLSTNPQYLKNEATDQE--PKEQEVGYKDWQITLCRR--FRSLKLWVVIRNFGVANLRNFIRSHVGM  385 (502)
Q Consensus       310 g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~--~~~~~~~~~~~~~~~sr~--~~al~~~~~l~~~g~~g~~~~~~~~~~l  385 (502)
                      |++++++. .+. .+.   .+.........  .....+......+..+.+  ...+++|.+++.+..+|++++.++..++
T Consensus       209 g~~~~~~~-~~~-~~~---~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~  283 (373)
T cd06453         209 GVLYGKEE-LLE-EMP---PYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHEL  283 (373)
T ss_pred             EEEEEchH-Hhh-cCC---CeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence            98887654 222 111   12111000000  000000000111111111  2346788889888888999999999999


Q ss_pred             HHHHHHHHhcCCCeEEecCC--CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEE
Q 037144          386 AKLFERLVTSDKRFEVAFPR--NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFM  463 (502)
Q Consensus       386 a~~l~~~l~~~~~~~l~~~~--~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~  463 (502)
                      ++++.+.|+++++++++.++  ..++++|......                             ..++.+.|.+.|..+.
T Consensus       284 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~i~~~l~~~gi~i~  334 (373)
T cd06453         284 TAYALERLSEIPGVRVYGDAEDRAGVVSFNLEGIH-----------------------------PHDVATILDQYGIAVR  334 (373)
T ss_pred             HHHHHHHHhcCCCeEEeCCccccCCeEEEEECCcC-----------------------------HHHHHHHHHHCCEEec
Confidence            99999999999999988532  4567888764211                             2356777777776432


Q ss_pred             Eeee--------ECCEEEEEEEecCCCCcHHHHHHHHHHH
Q 037144          464 THAI--------VGGIYVLRFAAGNSMTMESHVRAAWTVV  495 (502)
Q Consensus       464 ~~~~--------~~g~~~lR~~~~~~~t~~~di~~~~~~l  495 (502)
                      ++..        .+...++|+|++ +.++++|||+++++|
T Consensus       335 ~g~~~~~~~~~~~~~~~~iRis~~-~~~t~~di~~~~~~l  373 (373)
T cd06453         335 AGHHCAQPLMRRLGVPGTVRASFG-LYNTEEEIDALVEAL  373 (373)
T ss_pred             cCccchhHHHHHhCCCCeEEEEec-CCCCHHHHHHHHhhC
Confidence            2211        112468999986 557788999999864

This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.

>PLN02651 cysteine desulfurase

Probab=99.97  E-value=1.7e-28  Score=248.76  Aligned_cols=287  Identities=10%  Similarity=0.052  Sum_probs=203.3

Q ss_pred             ccccCCCCCCHHHHHHHHHHhhc-----CCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHH
Q 037144           79 YFAYFPATSSVAGIVGEMLSSGF-----NVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEAL  153 (502)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~l~~~~-----n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~  153 (502)
                      ||++...++.++.++. .+...+     |+....+..++.+.++.+++++.+++++|.+++       ..+||+|+|+++
T Consensus         2 Yld~a~~~~~~~~v~~-a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-------~v~~t~~~t~a~   73 (364)
T PLN02651          2 YLDMQATTPIDPRVLD-AMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPK-------EIIFTSGATESN   73 (364)
T ss_pred             cccCcCCCCCCHHHHH-HHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC-------eEEEeCCHHHHH
Confidence            5666655555555443 333322     111112223455677777899999999998754       589999999999


Q ss_pred             HHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHH---HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhc
Q 037144          154 LCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQ---IVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEA  230 (502)
Q Consensus       154 ~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~---~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~  230 (502)
                      ..++..+.....+       +++.|+++...|+++.....   ..|+   +++.+|+++  ++.+|+++|+++|++++  
T Consensus        74 ~~~l~~~~~~~~~-------~g~~vl~~~~~h~s~~~~~~~~~~~g~---~v~~v~~~~--~~~~d~~~l~~~i~~~t--  139 (364)
T PLN02651         74 NLAIKGVMHFYKD-------KKKHVITTQTEHKCVLDSCRHLQQEGF---EVTYLPVKS--DGLVDLDELAAAIRPDT--  139 (364)
T ss_pred             HHHHHHHHHhccC-------CCCEEEEcccccHHHHHHHHHHHhcCC---EEEEEccCC--CCcCCHHHHHHhcCCCc--
Confidence            8888776543211       56788999999998765543   4577   899999875  46899999999997654  


Q ss_pred             CCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcce
Q 037144          231 ELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCC  310 (502)
Q Consensus       231 g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g  310 (502)
                          .+|+++++++++|.+.|+++|+++|+++|+++|||++++.+.++++-.+ .     ++|++++++||| ++|.|+|
T Consensus       140 ----~lv~v~~~~n~tG~~~~l~~I~~~~~~~g~~~~vD~a~~~g~~~~~~~~-~-----~~D~~~~s~hK~-~gp~G~g  208 (364)
T PLN02651        140 ----ALVSVMAVNNEIGVIQPVEEIGELCREKKVLFHTDAAQAVGKIPVDVDD-L-----GVDLMSISGHKI-YGPKGVG  208 (364)
T ss_pred             ----EEEEEECCCCCceecccHHHHHHHHHHcCCEEEEEcchhhCCcccCccc-C-----CCCEEEechhhh-CCCCceE
Confidence                3889999999999999999999999999999999999998877665221 1     799999999998 6899999


Q ss_pred             EEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccc-cCCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHH
Q 037144          311 CLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQI-TLCRRF-RSLKLWVVIRNFGVANLRNFIRSHVGMAKL  388 (502)
Q Consensus       311 ~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~-~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~la~~  388 (502)
                      +++++++...    ...+.+.... ..            ... .++... ..+++..+++.+.. +.+++.++..+++++
T Consensus       209 ~l~v~~~~~~----~l~p~~~g~~-~~------------~~~~~GT~~~~~~~~l~~al~~~~~-~~~~i~~~~~~l~~~  270 (364)
T PLN02651        209 ALYVRRRPRV----RLEPLMSGGG-QE------------RGRRSGTENTPLVVGLGAACELAMK-EMDYDEKHMKALRER  270 (364)
T ss_pred             EEEEcCCCCC----CCCccccCCC-cc------------CCccCCCccHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHH
Confidence            9999875321    1112111110 00            001 112221 23566677777643 458888999999999


Q ss_pred             HHHHHhc-CCCeEEecC--CC---eeEEEEEeec
Q 037144          389 FERLVTS-DKRFEVAFP--RN---FSLVCFRVTP  416 (502)
Q Consensus       389 l~~~l~~-~~~~~l~~~--~~---~~~v~f~~~~  416 (502)
                      +.+.|++ +|+++++.+  +.   .++++|.+..
T Consensus       271 l~~~l~~~~~~~~i~~~~~~~~~~~~i~~~~~~~  304 (364)
T PLN02651        271 LLNGLRAKLGGVRVNGPRDPEKRYPGTLNLSFAY  304 (364)
T ss_pred             HHHHHHhhCCCEEEECCCCcccCcCCEEEEEeCC
Confidence            9999985 689999875  22   3588888753

>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase

Probab=99.97  E-value=7.2e-28  Score=244.63  Aligned_cols=308  Identities=15%  Similarity=0.132  Sum_probs=212.6

Q ss_pred             CCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCcccccCCCCCCHHHHHHHHHHh-hcC------------CCCcccccChh
Q 037144           47 ESAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSS-GFN------------VVGLDWISSPA  113 (502)
Q Consensus        47 ~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~-~~n------------~~~~~~~~~p~  113 (502)
                      ..+|++|.+.+.|...|.++-.-..++|.     +.+--+---.-+...++.. .++            ..+..-..++.
T Consensus        28 ~~~p~~g~~~~~i~~~l~~l~~~~~~~~~-----~~~~~gere~rv~~~~~~~~~~~~~hgigr~~~l~~~q~ka~gss~  102 (444)
T TIGR03531        28 RKIPEEGWDDETIELFLHELSVMDTNNFP-----NNVGVGEREGRVFSKLVARRHYRFCHGIGRSGDLVAPQPKAAGSSL  102 (444)
T ss_pred             CcCCccCCCHHHHHHHHHHHhcCCcCCCc-----cccCcCcccceeechhhhhcccceecCCCCcccccccCccccCccH
Confidence            46899999999888888876443334443     1111000000000111110 011            01112224556


Q ss_pred             hHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCch-HHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHH
Q 037144          114 AVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTC-EALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAA  192 (502)
Q Consensus       114 ~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt-~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa  192 (502)
                      ...+.+++..++++++|.+...      .++++++|| +++.+++.+++.+        +.++..|+++..+|.|+.+++
T Consensus       103 ~~~l~~~~e~~~~~~~G~~~~~------~a~~v~~~Tg~al~laL~alr~~--------~~~gd~VI~p~~th~S~~kAi  168 (444)
T TIGR03531       103 LYKLTNKLVKDFLKLLGLRSIK------SAFVVPLATGMSLSLCLSALRHK--------RPKAKYVIWPRIDQKSCIKAI  168 (444)
T ss_pred             HHHHHHHHHHHHHHHcCCCCCC------EEEEECCHHHHHHHHHHHHcCCc--------CCCCCEEEEECcChHHHHHHH
Confidence            7889999999999999997431      478899999 7888888777642        012456677778999999999


Q ss_pred             HHcCCCCCCEEEEecC-CCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecc
Q 037144          193 QIVGIDRKNIRAIKTT-KSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAA  271 (502)
Q Consensus       193 ~~~Glg~~~v~~v~~~-~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA  271 (502)
                      .++|+   +++.|++. +++++.||+++|+++|++...  ..+.+|+.+.+++..|..||+++|+++|++||+|+|||+|
T Consensus       169 ~~~G~---~pv~Vd~~~d~~~~~iD~e~Le~aIt~~~~--kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaA  243 (444)
T TIGR03531       169 STAGF---EPRVIETVLDGDELTTDVEDIERAIEEIGP--DNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNA  243 (444)
T ss_pred             HHcCC---eEEEeeeeecCcCCCcCHHHHHHHHHhccC--CCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECc
Confidence            99999   99999952 234699999999999985321  2345566566666778999999999999999999999999


Q ss_pred             cccccccCccchhhh-cCC--CCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCC
Q 037144          272 YAGSACICPEFRHFI-DGV--ECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYK  348 (502)
Q Consensus       272 ~g~~~~~~~~~~~~~-~~~--~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~  348 (502)
                      ||...   +...+.. .++  .++|++++++||++++|.++|+++++++..... +..  .|....              
T Consensus       244 yg~~~---~~~~~~~~~g~~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~el~~~-i~~--~y~g~~--------------  303 (444)
T TIGR03531       244 YGLQS---NKYMELINKAIKVGRVDAVVSSTDKNFMVPVGGAIIYSFDENFIQE-ISK--SYPGRA--------------  303 (444)
T ss_pred             CcCcC---hhhhhhhhccccccCCCeEEEeCccCCCCCCCEEEEEECCHHHHHH-HHH--hccCCC--------------
Confidence            98643   2222222 232  258999999999999999999998988876542 221  121100              


Q ss_pred             cccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEecCC
Q 037144          349 DWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK---RFEVAFPR  405 (502)
Q Consensus       349 ~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~---~~~l~~~~  405 (502)
                             ....++.+|+++..+|.+++++++++..++++++.+.|+++.   |.+++..|
T Consensus       304 -------~~s~~~~~~~~ll~~G~~g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~~  356 (444)
T TIGR03531       304 -------SASPSLDVLITLLSLGSKGYLELLKERKEMYKYLKELLQKLAERHGERLLDTP  356 (444)
T ss_pred             -------CChHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeecCC
Confidence                   012457899999999999999999999999999999997642   45666433

In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.

>TIGR02006 IscS cysteine desulfurase IscS

Probab=99.97  E-value=2.4e-28  Score=250.87  Aligned_cols=345  Identities=13%  Similarity=0.108  Sum_probs=226.3

Q ss_pred             CcccccCCCCCCHHHHHHHHHHhhc-----CCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchH
Q 037144           77 PNYFAYFPATSSVAGIVGEMLSSGF-----NVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCE  151 (502)
Q Consensus        77 p~~~~~~~~~~~~~~~~~~~l~~~~-----n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~  151 (502)
                      +.||++...++.++.++ +.+...+     |+....+..+.......+++++.+++++|.+++       ..+|++|+|+
T Consensus         4 ~~yld~aa~~~~~~~v~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-------~v~~~~g~t~   75 (402)
T TIGR02006         4 PIYLDYAATTPVDPRVA-EKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADSR-------EIVFTSGATE   75 (402)
T ss_pred             cEEeeCCcCCCCCHHHH-HHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC-------eEEEeCCHHH
Confidence            46888877666666554 4433333     111111112222345666788999999998754       5899999999


Q ss_pred             HHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHH---HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHH
Q 037144          152 ALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQ---IVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDV  228 (502)
Q Consensus       152 a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~---~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~  228 (502)
                      ++..++........+       ++++|+++..+|.++..++.   ..|+   +++.||+++  ++.+|+++|++++++.+
T Consensus        76 a~~~~l~~l~~~~~~-------~g~~Vi~~~~~h~s~~~~~~~~~~~g~---~v~~v~~~~--~~~~d~~~l~~~l~~~~  143 (402)
T TIGR02006        76 SNNLAIKGIAHFYKS-------KGNHIITSKTEHKAVLDTCRYLEREGF---EVTYLPPKS--NGLIDLEELKAAIRDDT  143 (402)
T ss_pred             HHHHHHHHHHHhhcC-------CCCEEEECCCccHHHHHHHHHHHhcCC---EEEEEccCC--CCcCCHHHHHHhcCCCC
Confidence            998877665431111       56788999999998776654   3488   999999875  46899999999986543


Q ss_pred             hcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc
Q 037144          229 EAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD  308 (502)
Q Consensus       229 ~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~  308 (502)
                            .+|++++++|++|.+.|+++|.++|+++|+|+|||++++.+..+.+-. .     .++|++++++||++ +|.|
T Consensus       144 ------~lv~v~~~~n~tG~~~~~~~I~~l~~~~g~~livD~a~a~g~~~~~~~-~-----~~~D~~~~s~~K~~-gp~G  210 (402)
T TIGR02006       144 ------ILVSIMHVNNEIGVIQDIAAIGEICRERKVFFHVDAAQSVGKIPINVN-E-----LKVDLMSISGHKIY-GPKG  210 (402)
T ss_pred             ------EEEEEECCCcCceecccHHHHHHHHHHcCCEEEEEcchhcCCcccCcc-c-----cCCCEEEEehhhhc-CCCc
Confidence                  488899999999999999999999999999999999998877654321 1     17999999999975 5999


Q ss_pred             ceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCC-C-CCchHHHHHHHHhcHHHHHHHHHHHHHHH
Q 037144          309 CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCR-R-FRSLKLWVVIRNFGVANLRNFIRSHVGMA  386 (502)
Q Consensus       309 ~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr-~-~~al~~~~~l~~~g~~g~~~~~~~~~~la  386 (502)
                      +|+++++++....    ..+ ........            ..++.+. . ...+.+..+++.+ .++++++.++..+++
T Consensus       211 ~G~l~~~~~~~~~----~~~-~~~g~~~~------------~~~~~gt~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~  272 (402)
T TIGR02006       211 IGALYVRRKPRVR----LEA-LIHGGGHE------------RGMRSGTLPTHQIVGMGEAFRIA-KEEMAQDTAHVLALR  272 (402)
T ss_pred             eEEEEEccCCCCC----CCc-eecCCCcc------------CCccCCCccHHHHHHHHHHHHHH-HHhHHHHHHHHHHHH
Confidence            9999998653211    111 11110000            0111111 1 1223444556554 457888889999999


Q ss_pred             HHHHHHHhcCCCeEEecCC--Ce-e--EEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcE
Q 037144          387 KLFERLVTSDKRFEVAFPR--NF-S--LVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKV  461 (502)
Q Consensus       387 ~~l~~~l~~~~~~~l~~~~--~~-~--~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~  461 (502)
                      +++++.|++++++++..++  .. .  +++|...+.                           +.+...+.+.....|..
T Consensus       273 ~~l~~~l~~~~~v~~~~~~~~~~p~~~~v~f~~~~~---------------------------~~~~~~l~~i~v~~G~~  325 (402)
T TIGR02006       273 DRLLNGIKSIEEVYLNGDLEHRVPGNLNVSFNYVEG---------------------------ESLIMALKDLAVSSGSA  325 (402)
T ss_pred             HHHHHHHhcCCCEEEeCCccccCCCeEEEEEeCcCH---------------------------HHHHHhcCCEEEechhh
Confidence            9999999999999887532  22 2  345542110                           11222221111112222


Q ss_pred             EEEeeeE--------------CCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          462 FMTHAIV--------------GGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       462 ~~~~~~~--------------~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                       +++...              ...+++|+|+. +.||++|||++++.|+++.+.
T Consensus       326 -c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~-~~~t~edid~l~~~l~~~~~~  377 (402)
T TIGR02006       326 -CTSASLEPSYVLRALGINDELAHSSIRFTIG-RFTTEEEIDYAVKLVKSAIDK  377 (402)
T ss_pred             -cCCCCCCccHHHHHcCCChhhcCceEEEEec-CCCCHHHHHHHHHHHHHHHHH
Confidence             222110              11368999996 558888999999999988753

This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.

>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family

Probab=99.96  E-value=9.1e-28  Score=242.93  Aligned_cols=342  Identities=14%  Similarity=0.069  Sum_probs=233.5

Q ss_pred             ccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHH
Q 037144           81 AYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAA  160 (502)
Q Consensus        81 ~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a  160 (502)
                      .|.+++...+..+.+.+...+.    . ..++...++.+++++++++++|.+...      ..++++|||+++..++.+.
T Consensus         2 ~~~~~~~~~~~~v~~a~~~~~~----~-~~~~~~~~~~~~~~~~la~~~g~~~~~------~~~~~~~~t~al~~~~~~~   70 (356)
T cd06451           2 LLIPGPSNVPPRVLKAMNRPML----G-HRSPEFLALMDEILEGLRYVFQTENGL------TFLLSGSGTGAMEAALSNL   70 (356)
T ss_pred             cccCCCcCCCHHHHHHhCCCcc----C-CCCHHHHHHHHHHHHHHHHHhcCCCCC------EEEEecCcHHHHHHHHHHh
Confidence            3455666666666666654321    1 235667778889999999999995432      4788999999987777654


Q ss_pred             HHHHHHHhCccCCCCeEEEeCCCCchh--HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHH-HHhcCCccEEE
Q 037144          161 RDRVLKKIGRENISKLVVYSSDQTHCA--FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINL-DVEAELIPLFL  237 (502)
Q Consensus       161 ~~~~~~~~~~~~~~~~~v~~s~~~H~s--~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~-~~~~g~~p~~V  237 (502)
                      ..           +++.|+++...|++  +...++..|+   +++.+|+++  ++.+|++++++.+++ +      |.+|
T Consensus        71 ~~-----------~g~~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~~~~~l~~~i~~~~------~~~v  128 (356)
T cd06451          71 LE-----------PGDKVLVGVNGVFGDRWADMAERYGA---DVDVVEKPW--GEAVSPEEIAEALEQHD------IKAV  128 (356)
T ss_pred             CC-----------CCCEEEEecCCchhHHHHHHHHHhCC---CeEEeecCC--CCCCCHHHHHHHHhccC------CCEE
Confidence            32           56678888778886  4567888999   999999875  368999999999975 3      3478


Q ss_pred             EEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCc
Q 037144          238 CATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDP  317 (502)
Q Consensus       238 v~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~  317 (502)
                      +++.++|++|.+.|+++|.++|+++|+++++|++|+.+..+.+...      .++|.++.++|||++.|.|+|+++++++
T Consensus       129 ~i~~~~~~~G~~~~~~~i~~~a~~~~~~li~D~~~~~g~~~~~~~~------~~~d~~~~s~~K~l~~p~g~G~l~~~~~  202 (356)
T cd06451         129 TLTHNETSTGVLNPLEGIGALAKKHDALLIVDAVSSLGGEPFRMDE------WGVDVAYTGSQKALGAPPGLGPIAFSER  202 (356)
T ss_pred             EEeccCCCcccccCHHHHHHHHHhcCCEEEEeeehhccCccccccc------cCccEEEecCchhccCCCCcceeEECHH
Confidence            8889999999999999999999999999999999865543322111      1689999999999999999999998764


Q ss_pred             hhhhhhhc--C-CcccccCccCCCCCcccccCCCccc-ccCCC-CC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHH
Q 037144          318 SCLLSTLS--T-NPQYLKNEATDQEPKEQEVGYKDWQ-ITLCR-RF-RSLKLWVVIRNFGVANLRNFIRSHVGMAKLFER  391 (502)
Q Consensus       318 ~~l~~~~~--~-~~~yl~~~~~~~~~~~~~~~~~~~~-~~~sr-~~-~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~  391 (502)
                      . ......  . ...|.....        ...+.... ...+. .. ...++.++++.+...+++++.++..++++++.+
T Consensus       203 ~-~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~  273 (356)
T cd06451         203 A-LERIKKKTKPKGFYFDLLL--------LLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALRE  273 (356)
T ss_pred             H-HHHHHhcCCCCceeecHHH--------HHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence            2 222221  1 111111000        00000000 01111 11 123556777777778899999999999999999


Q ss_pred             HHhcCCCeEEecCC--CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcEEEEeeeE
Q 037144          392 LVTSDKRFEVAFPR--NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKVFMTHAIV  468 (502)
Q Consensus       392 ~l~~~~~~~l~~~~--~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~  468 (502)
                      .|++. ++++..++  ..+++.|...+.+.                         +  ..++.++|.++ |+...++...
T Consensus       274 ~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~-------------------------~--~~~~~~~L~~~~gI~~~~g~~~  325 (356)
T cd06451         274 GLEAL-GLKLLAKPELRSPTVTAVLVPEGV-------------------------D--GDEVVRRLMKRYNIEIAGGLGP  325 (356)
T ss_pred             HHHHc-CCeeccCcccCCCceEEEECCCCC-------------------------C--HHHHHHHHHHhCCEEEeccccc
Confidence            99987 89887543  24444433223211                         0  24667777777 7643332222


Q ss_pred             CCEEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144          469 GGIYVLRFAAGNSMTMESHVRAAWTVVQEHL  499 (502)
Q Consensus       469 ~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~  499 (502)
                      ....++|++++. .++++||++++++|+++.
T Consensus       326 ~~~~~iRis~~~-~~~~e~v~~~~~~l~~~~  355 (356)
T cd06451         326 TAGKVFRIGHMG-EATREDVLGVLSALEEAL  355 (356)
T ss_pred             ccCCEEEEecCC-CCCHHHHHHHHHHHHHHh
Confidence            223599999864 477779999999998865

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.

>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase

Probab=99.96  E-value=8.8e-27  Score=241.07  Aligned_cols=357  Identities=14%  Similarity=0.092  Sum_probs=237.1

Q ss_pred             CcccccCCCCCCHHHHHHHHHHhhcCC---C--CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchH
Q 037144           77 PNYFAYFPATSSVAGIVGEMLSSGFNV---V--GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCE  151 (502)
Q Consensus        77 p~~~~~~~~~~~~~~~~~~~l~~~~n~---~--~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~  151 (502)
                      ..||++-..++. |..+.+.+...+..   +  ...+..+........++++.+++++|.++..      ..++|+|+|+
T Consensus        33 ~iyLd~a~~~~~-p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~------~v~~t~g~t~  105 (424)
T PLN02855         33 LVYLDNAATSQK-PAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINASTSR------EIVFTRNATE  105 (424)
T ss_pred             eEEeeCccccCC-CHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCCC------EEEEeCCHHH
Confidence            478888655544 44455555444321   2  1112223334455667889999999995321      6899999999


Q ss_pred             HHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh----HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHH
Q 037144          152 ALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA----FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLD  227 (502)
Q Consensus       152 a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s----~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~  227 (502)
                      ++...+.......+       .+++.|+++...|++    +...++..|+   +++.+|++.+  +.+|+++|+++|+++
T Consensus       106 al~~i~~~~~~~~~-------~~gd~vl~~~~~~~s~~~~~~~~a~~~g~---~v~~v~~~~~--~~~~~~~l~~~i~~~  173 (424)
T PLN02855        106 AINLVAYTWGLANL-------KPGDEVILSVAEHHSNIVPWQLVAQKTGA---VLKFVGLTPD--EVLDVEQLKELLSEK  173 (424)
T ss_pred             HHHHHHHHhhhhcC-------CCcCEEEECCCccHHHHHHHHHHHHHcCC---EEEEEecCCC--CCcCHHHHHHHhccC
Confidence            97665543210000       156788899888876    4456677899   9999998753  479999999999754


Q ss_pred             HhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC
Q 037144          228 VEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL  307 (502)
Q Consensus       228 ~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~  307 (502)
                      +      .+|++++++|++|.+.|+++|+++|+++|++++||++|+.+..+.+ ...     .++|++++++||+ ++|.
T Consensus       174 t------~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g~~~~~-~~~-----~~~d~~~~s~~K~-~gp~  240 (424)
T PLN02855        174 T------KLVATHHVSNVLGSILPVEDIVHWAHAVGAKVLVDACQSVPHMPVD-VQT-----LGADFLVASSHKM-CGPT  240 (424)
T ss_pred             c------eEEEEeCccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCcCCC-chh-----cCCCEEEeecccc-cCCC
Confidence            3      4889999999999999999999999999999999999976655443 111     1689999999995 5688


Q ss_pred             cceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCC--cccccCCCC--CCchHHHHHHHHhcHHHHHHHHHHHH
Q 037144          308 DCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYK--DWQITLCRR--FRSLKLWVVIRNFGVANLRNFIRSHV  383 (502)
Q Consensus       308 ~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~--~~~~~~sr~--~~al~~~~~l~~~g~~g~~~~~~~~~  383 (502)
                      |+|++++++.. +. .+   .+++...............+.  ...++.+.+  ...+.++.+++.+...|++++.++..
T Consensus       241 G~G~l~~~~~~-~~-~~---~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~  315 (424)
T PLN02855        241 GIGFLWGKSDL-LE-SM---PPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEV  315 (424)
T ss_pred             ccEEEEEchhh-hh-cC---CCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence            99999987542 21 11   222211110000000000000  001122211  12356677777776778999999999


Q ss_pred             HHHHHHHHHHhcCCCeEEecCC------CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh
Q 037144          384 GMAKLFERLVTSDKRFEVAFPR------NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV  457 (502)
Q Consensus       384 ~la~~l~~~l~~~~~~~l~~~~------~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~  457 (502)
                      ++++++++.|+++++++++.+.      ..++++|.++...                             ..++.+.|.+
T Consensus       316 ~l~~~l~~~L~~~~g~~i~~~~~~~~~~r~~~v~~~~~~~~-----------------------------~~~v~~~L~~  366 (424)
T PLN02855        316 ELGTYLYEKLSSVPGVRIYGPKPSEGVGRAALCAFNVEGIH-----------------------------PTDLSTFLDQ  366 (424)
T ss_pred             HHHHHHHHHHhcCCCEEEeCCCcccccCcccEEEEEECCcC-----------------------------HHHHHHHhcc
Confidence            9999999999999999998642      3578888875321                             2356677766


Q ss_pred             c-CcEEEEeee---------ECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          458 S-GKVFMTHAI---------VGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       458 ~-g~~~~~~~~---------~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      + |+. +..+.         .+-..++|+|+. +.++++||++++++|+++.+.
T Consensus       367 ~~gI~-v~~g~~c~~~~~~~~g~~~~iRiS~~-~ynt~~di~~l~~~l~~~~~~  418 (424)
T PLN02855        367 QHGVA-IRSGHHCAQPLHRYLGVNASARASLY-FYNTKEEVDAFIHALKDTIAF  418 (424)
T ss_pred             cCCEE-EechhhhhHHHHHHhCCCCeEEEEec-cCCCHHHHHHHHHHHHHHHHH
Confidence            6 653 33221         111357999985 668888999999999988753

>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue

Probab=99.96  E-value=3.4e-27  Score=239.98  Aligned_cols=344  Identities=17%  Similarity=0.139  Sum_probs=234.6

Q ss_pred             ccccCCCCCCHHHHHHHHHHhhc-----CCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHH
Q 037144           79 YFAYFPATSSVAGIVGEMLSSGF-----NVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEAL  153 (502)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~l~~~~-----n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~  153 (502)
                      ||.+..+++.+.. +.+.+...+     |+....+..+....++-+++++.+++++|.+...      ..+|++++|+++
T Consensus         2 Yld~~~~~~~p~~-v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~------~v~~~~~~t~a~   74 (371)
T PF00266_consen    2 YLDNAGTGPMPKS-VLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPDE------EVVFTSNGTEAL   74 (371)
T ss_dssp             EEBTSSS-B-BHH-HHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTE------EEEEESSHHHHH
T ss_pred             EeeCCCccCCCHH-HHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCcccc------ccccccccchhh
Confidence            4555444444444 444444332     2222344455667778888999999999998732      689999999988


Q ss_pred             HHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH----HHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHh
Q 037144          154 LCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ----KAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVE  229 (502)
Q Consensus       154 ~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~----~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~  229 (502)
                      ..++...+.. .+       ++..|+++...|++..    ..++..|+   +++.+|.+.  ++.+|+++++++|+++++
T Consensus        75 ~~~~~~l~~~-~~-------~g~~vl~~~~~~~s~~~~~~~~~~~~g~---~v~~i~~~~--~~~~~~~~~~~~l~~~~~  141 (371)
T PF00266_consen   75 NAVASSLLNP-LK-------PGDEVLVTSNEHPSNRYPWEEIAKRKGA---EVRVIPADP--GGSLDLEDLEEALNPDTR  141 (371)
T ss_dssp             HHHHHHHHHH-GT-------TTCEEEEEESSHHHHHHHHHHHHHHTTE---EEEEEEEGT--TSSCSHHHHHHHHHTTES
T ss_pred             hhhhhccccc-cc-------cccccccccccccccccccccccccchh---hhccccccc--cchhhhhhhhhhhccccc
Confidence            7766666432 11       5678888889998765    45557799   999999975  358999999999976544


Q ss_pred             cCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcc
Q 037144          230 AELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDC  309 (502)
Q Consensus       230 ~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~  309 (502)
                            +|++++.+|.+|.+.|+++|+++|+++|++++||++++.+.++.+-. ..     ++|++++++|| +++|.|+
T Consensus       142 ------lv~~~~~~~~tG~~~pi~~I~~~~~~~~~~~~vD~~~~~g~~~id~~-~~-----~~D~~~~s~~K-l~gp~G~  208 (371)
T PF00266_consen  142 ------LVSISHVENSTGVRNPIEEIAKLAHEYGALLVVDAAQSAGCVPIDLD-EL-----GADFLVFSSHK-LGGPPGL  208 (371)
T ss_dssp             ------EEEEESBETTTTBBSSHHHHHHHHHHTTSEEEEE-TTTTTTSS--TT-TT-----TESEEEEESTS-TTSSSTE
T ss_pred             ------eEEeecccccccEEeeeceehhhhhccCCceeEechhcccccccccc-cc-----ccceeeecccc-cCCCCch
Confidence                  89999999999999999999999999999999999999988876532 21     79999999999 8889999


Q ss_pred             eEEEeeCchhhhhhhcCCccc--ccCccCCCCCcccccCCCcccccCCCC-C-CchHHHHHHHHhcHHHHHHHHHHHHHH
Q 037144          310 CCLWVKDPSCLLSTLSTNPQY--LKNEATDQEPKEQEVGYKDWQITLCRR-F-RSLKLWVVIRNFGVANLRNFIRSHVGM  385 (502)
Q Consensus       310 g~~~~r~~~~l~~~~~~~~~y--l~~~~~~~~~~~~~~~~~~~~~~~sr~-~-~al~~~~~l~~~g~~g~~~~~~~~~~l  385 (502)
                      |+++++++.. .........+  .......    ........+.++.+.+ . ..+.+..+++.+...|++++.++..++
T Consensus       209 g~l~v~~~~~-~~~~p~~~~~~~~~~~~~~----~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l  283 (371)
T PF00266_consen  209 GFLYVRPEAI-ERLRPAKPGGGYLDFPSLQ----EYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIREL  283 (371)
T ss_dssp             EEEEEEHHHH-HHHHTSSSSSSTTTHHHHH----HHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhheehhhhh-hccccccccccccccccch----hcccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhH
Confidence            9999998643 2221111111  1000000    0000011112222222 1 124566778888788999999999999


Q ss_pred             HHHHHHHHhcCCCeEEecC----CCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcE
Q 037144          386 AKLFERLVTSDKRFEVAFP----RNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKV  461 (502)
Q Consensus       386 a~~l~~~l~~~~~~~l~~~----~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~  461 (502)
                      ++++.+.|.++++++++.+    ...++++|.+....                             ...+.+.|.++|+.
T Consensus       284 ~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-----------------------------~~~~~~~L~~~~I~  334 (371)
T PF00266_consen  284 AEYLREALEELPGIEVLGPDDEPRRPSIVSFNLPGSD-----------------------------ADDVVKYLEERGIA  334 (371)
T ss_dssp             HHHHHHHHHHTTTEEESSSSCGGBGTTEEEEEETTSS-----------------------------HHHHHHHHHHHTEE
T ss_pred             HHHHHhhhhcCCceeEeeecccccccceEEEeecCCC-----------------------------HHHHHHHHhhcCEE
Confidence            9999999999999998763    24678899885432                             24667777777754


Q ss_pred             EEEeeeEC---------CEEEEEEEecCCCCcHHHHHHH
Q 037144          462 FMTHAIVG---------GIYVLRFAAGNSMTMESHVRAA  491 (502)
Q Consensus       462 ~~~~~~~~---------g~~~lR~~~~~~~t~~~di~~~  491 (502)
                      + ..+...         -.+++|+|+. +.++++|||+|
T Consensus       335 ~-~~G~~~~~~~~~~~~~~~~iRvS~~-~~nt~~dv~~l  371 (371)
T PF00266_consen  335 V-STGSACAGPSLDILGMGGVIRVSLH-YYNTEEDVDRL  371 (371)
T ss_dssp             E-EESTTTCHHHHHHHHTTTEEEEE-G-TTSSHHHHHHH
T ss_pred             E-eccCcccHHHHHHhCCCCEEEEecc-CCCCHHHHhhC
Confidence            3 332211         1268999975 66778899986

On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....

>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type

Probab=99.96  E-value=2.1e-26  Score=235.14  Aligned_cols=342  Identities=15%  Similarity=0.153  Sum_probs=222.6

Q ss_pred             ccccCCCCCCHHHHHHHHHHhhc-----CCCCcccccChhhHHHHHHHHHHHHHhcCC-CCccCcCCCCcEEEcCCchHH
Q 037144           79 YFAYFPATSSVAGIVGEMLSSGF-----NVVGLDWISSPAAVELENIVMDWLGQMLDL-PKSFLFSGNGGGVIQGTTCEA  152 (502)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~l~~~~-----n~~~~~~~~~p~~~~le~~~~~~l~~l~g~-~~~~~~~~~~~g~~t~ggt~a  152 (502)
                      ||++-.+++.++. +.+.+..++     |+........+....+++.. ..+.+.+|. +.+       ..++|+|+|++
T Consensus         2 yld~aa~~~~~~~-v~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~a~-~~~~~~~~~~~~~-------~i~~t~g~tea   72 (382)
T TIGR03403         2 YLDNNATTMLDPK-VKELMDPFFCDIYGNPNSLHQFGTATHPAIAEAL-DKLYKGINARDLD-------DIIITSCATES   72 (382)
T ss_pred             cccCcCCCCCCHH-HHHHHHHHHHhcCcCCccccHHHHHHHHHHHHHH-HHHHHHcCcCCCC-------eEEEeCCHHHH
Confidence            5666555554443 555544433     22211111112334555444 444556676 332       68999999999


Q ss_pred             HHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHH---HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHh
Q 037144          153 LLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAA---QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVE  229 (502)
Q Consensus       153 ~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa---~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~  229 (502)
                      +..++.......+.+     .++..|+++...|+++....   +..|+   +++.||+++  ++.+|+++|++++++++ 
T Consensus        73 l~~~~~~~~~~~~~~-----~~~~~vi~~~~e~ps~~~~~~~~~~~G~---~v~~v~~~~--~g~~d~~~l~~~i~~~t-  141 (382)
T TIGR03403        73 NNWVLKGVYFDEILK-----GGKNHIITTEVEHPAVRATCAFLESLGV---EVTYLPINE--QGTITAEQVREAITEKT-  141 (382)
T ss_pred             HHHHHHHHHHhhccc-----CCCCEEEEcCCccHHHHHHHHHHHHCCC---EEEEEecCC--CCCCCHHHHHHhcccCC-
Confidence            987776542111100     03467888988998876654   45688   999999975  46899999999987644 


Q ss_pred             cCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcc
Q 037144          230 AELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDC  309 (502)
Q Consensus       230 ~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~  309 (502)
                           .+|++++++|++|.+.|+++|.++|+++|+++|||++++.+..+.+...      .++|++++++|||+ +|.|+
T Consensus       142 -----~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~~ivD~a~~~g~~~~~~~~------~~~D~~~~s~~K~~-gp~G~  209 (382)
T TIGR03403       142 -----ALVSVMWANNETGMIFPIKEIGEICKERGVLFHTDAVQAIGKIPVDVQK------AGVDFLSFSAHKFH-GPKGV  209 (382)
T ss_pred             -----eEEEEEcccCCCccccCHHHHHHHHHHcCCEEEEechhhcCCCccCccc------cCCCEEEEcchhhC-CCCce
Confidence                 3788899999999999999999999999999999999987765543221      17999999999985 68899


Q ss_pred             eEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCc-hHHHHHHHHhcHHHHHHHHHHHHHHHHH
Q 037144          310 CCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRS-LKLWVVIRNFGVANLRNFIRSHVGMAKL  388 (502)
Q Consensus       310 g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~a-l~~~~~l~~~g~~g~~~~~~~~~~la~~  388 (502)
                      |++++|+...+      .+ .+......     .  ...    .++-...+ +++..+++.. .+.++...++...++++
T Consensus       210 g~l~vr~~~~~------~p-~~~g~~~~-----~--~~~----~gt~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~  270 (382)
T TIGR03403       210 GGLYIRKGVEL------TP-LFHGGEHM-----G--GRR----SGTLNVPYIVAMGEAMRLA-NEYLDFEKSHVRRLRDR  270 (382)
T ss_pred             EEEEECCCCCC------CC-cccCCCCC-----C--Ccc----cCCcChHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHH
Confidence            99999875321      11 22111000     0  000    01111112 2455556543 44577788899999999


Q ss_pred             HHHHHhcCCCeEEecCC--C-eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEe
Q 037144          389 FERLVTSDKRFEVAFPR--N-FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTH  465 (502)
Q Consensus       389 l~~~l~~~~~~~l~~~~--~-~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~  465 (502)
                      +.+.|+++|+++++.+.  . .+++.|.+....                             ...+...|.++|+.+-++
T Consensus       271 l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~L~~~gI~v~~g  321 (382)
T TIGR03403       271 LEDALLELPDVFVVGDREHRVPNTILISIKGVE-----------------------------GEAMLWDLNKAGIAASTG  321 (382)
T ss_pred             HHHHHhcCCCEEEECCCCCCcCCEEEEEeCCCC-----------------------------HHHHHHhhccCCEEEEch
Confidence            99999999999998653  2 346677664321                             234555566667643321


Q ss_pred             ee--------------EC-----CEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          466 AI--------------VG-----GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       466 ~~--------------~~-----g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      ..              .+     ..+.+|+|++ +.++++|||+++++|+++.++
T Consensus       322 ~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~-~~~t~~did~~~~~l~~~~~~  375 (382)
T TIGR03403       322 SACASEDLEANPVMVAIGADKELAHTAIRLSLS-RFTTEEEIDYTIEVFKKAVQR  375 (382)
T ss_pred             hccCCCCCCcCHHHHHcCCChHHhCeeEEEECC-CCCCHHHHHHHHHHHHHHHHH
Confidence            10              01     1368999986 568888999999999987754

Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.

>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional

Probab=99.96  E-value=1.4e-25  Score=229.15  Aligned_cols=314  Identities=15%  Similarity=0.106  Sum_probs=215.1

Q ss_pred             HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcC
Q 037144          117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVG  196 (502)
Q Consensus       117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~G  196 (502)
                      ...++.+.+++++|.++         .++++|+|++|..++.+...           +++.|+++..+|++...+++..|
T Consensus        64 ~~~~l~~~lA~~~g~~~---------~~~~~g~t~a~~~al~~l~~-----------~gd~Vlv~~~~h~s~~~~~~~~G  123 (387)
T PRK09331         64 PIADFHEDLAEFLGMDE---------ARVTHGAREGKFAVMHSLCK-----------KGDYVVLDGLAHYTSYVAAERAG  123 (387)
T ss_pred             HHHHHHHHHHHHhCCCc---------EEEeCCHHHHHHHHHHHhcC-----------CCCEEEECCCchHHHHHHHHHcC
Confidence            45566777889999853         57899999999877766543           67789999999999999999999


Q ss_pred             CCCCCEEEEecCCCCCcccCHHHHHHHHHHHHh-cCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccc
Q 037144          197 IDRKNIRAIKTTKSSSYGLSAESVLSQINLDVE-AELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGS  275 (502)
Q Consensus       197 lg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~-~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~  275 (502)
                      +   +++.+|++.+.++.+|+++|+++|++..+ .+..+.+|+++++++++|.+.|+++|+++|++||+++|||+||+.+
T Consensus       124 ~---~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~l~~I~~la~~~g~~livD~a~~~g  200 (387)
T PRK09331        124 L---NVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLADAKKVAKVAHEYGIPFLLNGAYTVG  200 (387)
T ss_pred             C---EEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCcccC
Confidence            9   99999983222568999999999976422 1234678999999999999999999999999999999999999887


Q ss_pred             cccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCC
Q 037144          276 ACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLC  355 (502)
Q Consensus       276 ~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~s  355 (502)
                      .++.+... .     ++|.+++++|||+++|.+.|++++++. .+.........|....          ..    .+.++
T Consensus       201 ~~~~~~~~-~-----g~D~~~~s~~K~l~~~~~~G~l~~~~~-~i~~~~~~~~~~~~~~----------~~----~~~~~  259 (387)
T PRK09331        201 RMPVDGKK-L-----GADFIVGSGHKSMAASAPSGVLATTEE-YADKVFRTSRKFGVKE----------VE----LLGCT  259 (387)
T ss_pred             CcCCCHHH-c-----CCCEEEeeCcccccCCCCEEEEEECHH-HHhhcccccCCCcccc----------ee----eecee
Confidence            66554221 1     689999999999999989999888643 3222222222222110          00    01111


Q ss_pred             -CCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC--CCeeEEEEEeecCcchhhhhhcccCCCc
Q 037144          356 -RRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP--RNFSLVCFRVTPSAVMDKLRTKYKNGTY  432 (502)
Q Consensus       356 -r~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~--~~~~~v~f~~~~~~~~~~~~~~~~~~~~  432 (502)
                       +...+..+++++..+- +. .+++++..++++++++.|++++|++++.+  ...+++.+..+  ....           
T Consensus       260 ~~~~~~~~~~aal~~~~-~~-~~~~~~~~~~~~~l~~~L~~l~g~~~~~~~~~~~~i~~~~~~--~~~~-----------  324 (387)
T PRK09331        260 LRGAPLVTLMASFPHVV-ER-VKRWDEEVKKARWFVDELEKIEGFKQLGEKPRNHDLMKFETP--SFDE-----------  324 (387)
T ss_pred             cCchHHHHHHHHHHHHH-HH-HHHHHHHHHHHHHHHHHHhcCCCEEEeccCcCcCCeEEEeCC--chhH-----------
Confidence             1123344455554431 22 24567778899999999999999999842  23455655543  1100           


Q ss_pred             ccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          433 DQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       433 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                             ..........++.+.|.++|.....   .....++|+..+.  .+++|+++++++|+++.++
T Consensus       325 -------~~~~~~~~~~~~~~~L~~~gI~~~~---~~~~~i~ri~~~g--~t~~di~~l~~aL~~i~~~  381 (387)
T PRK09331        325 -------IAKKHKRRGFFLYEELKKRGIHGIK---PGATKEFKLSTYG--LTWEQVEYVADAFKEIAEK  381 (387)
T ss_pred             -------HhhhccccchhHHHHHHHcCceEEc---cCCceEEEEEecc--CCHHHHHHHHHHHHHHHHh
Confidence                   0000011124577778777874222   2234577877644  3667999999999998765

>PLN02409 serine--glyoxylate aminotransaminase

Probab=99.96  E-value=1.2e-26  Score=237.91  Aligned_cols=348  Identities=12%  Similarity=0.050  Sum_probs=237.6

Q ss_pred             cCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHH
Q 037144           82 YFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAAR  161 (502)
Q Consensus        82 ~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~  161 (502)
                      +.+++...+..+.+.+...+..    + .++.+.++.+++++++++++|.+...      ..+++++||.++..++....
T Consensus        13 ~~pGP~~~~~~V~~a~~~~~~~----~-~~~~~~~~~~~~~~~l~~~~g~~~~~------~vi~~~~gt~a~~~a~~~~~   81 (401)
T PLN02409         13 FVPGPVNIPERVLRAMNRPNED----H-RSPAFPALTKELLEDVKYIFKTKSGT------PFIFPTTGTGAWESALTNTL   81 (401)
T ss_pred             ccCCCCCCCHHHHHHhcCCCCC----C-CCHHHHHHHHHHHHHHHHHhCCCCCC------EEEEeCCcHHHHHHHHHhcC
Confidence            4566666666666665443322    1 36778889999999999999997532      57889999988866655432


Q ss_pred             HHHHHHhCccCCCCeEEEeCCCCchhH--HHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEE
Q 037144          162 DRVLKKIGRENISKLVVYSSDQTHCAF--QKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCA  239 (502)
Q Consensus       162 ~~~~~~~~~~~~~~~~v~~s~~~H~s~--~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~  239 (502)
                      .           +++.|+++...|++.  ...++..|+   +++.++.+++  ..+|+++|++++++++.  .++.+|++
T Consensus        82 ~-----------~Gd~Vlv~~~~~~~~~~~~~~~~~g~---~v~~v~~~~~--~~~~~~~l~~~l~~~~~--~~~k~v~~  143 (401)
T PLN02409         82 S-----------PGDKVVSFRIGQFSLLWIDQMQRLNF---DVDVVESPWG--QGADLDILKSKLRQDTN--HKIKAVCV  143 (401)
T ss_pred             C-----------CCCEEEEeCCCchhHHHHHHHHHcCC---ceEEEECCCC--CCCCHHHHHHHHhhCcC--CCccEEEE
Confidence            2           667788888888764  577888999   9999998763  35899999999986320  12458899


Q ss_pred             ecCCccccccCChhHHHHH--HHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCc
Q 037144          240 TVGTTAITAVDPLKPLCDV--AKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDP  317 (502)
Q Consensus       240 t~gtt~~G~idpl~eI~~i--~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~  317 (502)
                      ++.+|+||.+.|+++|+++  |+++|++++||++++.+..+.+-...      ++|++++++|||+++|.|+|+++++++
T Consensus       144 ~~~~~~tG~~~~~~~i~~l~~~~~~g~~~vvD~v~s~g~~~id~~~~------~~D~~~~s~~K~l~~P~G~G~l~~~~~  217 (401)
T PLN02409        144 VHNETSTGVTNDLAGVRKLLDCAQHPALLLVDGVSSIGALDFRMDEW------GVDVALTGSQKALSLPTGLGIVCASPK  217 (401)
T ss_pred             EeecccccccCCHHHHHHHHhhhccCcEEEEEcccccCCcccccccc------CccEEEEcCccccCcCCCcceeEECHH
Confidence            9999999999999999999  99999999999999876655432111      799999999999999999999998765


Q ss_pred             hhhhhhhcC--CcccccCccCCCCCcccccCCCcccccCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHh
Q 037144          318 SCLLSTLST--NPQYLKNEATDQEPKEQEVGYKDWQITLCRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVT  394 (502)
Q Consensus       318 ~~l~~~~~~--~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~  394 (502)
                      . +......  .+.|.......     .....+.+. ..+-. ...+.+..+++.+..+|++++.+++.++++++++.|+
T Consensus       218 ~-~~~~~~~~~~~~~~~~~~~~-----~~~~~g~~~-~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~  290 (401)
T PLN02409        218 A-LEASKTAKSPRVFFDWADYL-----KFYKLGTYW-PYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVE  290 (401)
T ss_pred             H-HHHHhcCCCCCeecCHHHHH-----HHHhcCCCC-CCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence            3 2222111  11222100000     000000000 00100 1123556677777778999999999999999999999


Q ss_pred             cCCCeEEecCC---Cee-EEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC-
Q 037144          395 SDKRFEVAFPR---NFS-LVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG-  469 (502)
Q Consensus       395 ~~~~~~l~~~~---~~~-~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-  469 (502)
                      ++ |++++.+.   .++ +++|+++. +.                         +  ..++.+.+.++..+.+.++... 
T Consensus       291 ~~-g~~~~~~~~~~~s~~v~~~~~p~-~~-------------------------~--~~~l~~~l~~~~~i~i~~G~~~~  341 (401)
T PLN02409        291 AW-GLKLCTKKPEWRSDTVTAVVVPE-GI-------------------------D--SAEIVKNAWKKYNLSLGLGLNKV  341 (401)
T ss_pred             Hc-CCeeccCChhhcccceEEEeCCC-CC-------------------------C--HHHHHHHHHHhCCEEEEcCCCcc
Confidence            87 89988642   243 44565532 11                         0  1245555544444455554433 


Q ss_pred             CEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          470 GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       470 g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      ...++|++.+.+ ++++|+.+++++|.++..+
T Consensus       342 ~~~~~Rig~~g~-~~~~~~~~~~~~~~~~l~~  372 (401)
T PLN02409        342 AGKVFRIGHLGN-VNELQLLGALAGVEMVLKD  372 (401)
T ss_pred             cCCEEEEcCCCC-CCHHHHHHHHHHHHHHHHH
Confidence            356899999876 5777999999999987654

>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits

Probab=99.96  E-value=2.1e-26  Score=236.54  Aligned_cols=370  Identities=12%  Similarity=0.060  Sum_probs=231.5

Q ss_pred             HHHHHHHHhhcCCCCCCCCCcccccCCCCCCHHHHHHHHHHhhcCCCCccccc-----ChhhHHHHHHHHHHHHHhcCCC
Q 037144           58 TILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWIS-----SPAAVELENIVMDWLGQMLDLP  132 (502)
Q Consensus        58 ~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~-----~p~~~~le~~~~~~l~~l~g~~  132 (502)
                      +||+++.+.-.++.....+-..++-...+..+|..+.+.....  .....|..     ..+..++.+++.+++++++|.+
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~p~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~   80 (398)
T cd00613           3 EVLRHLKRLASKNKALDQSMSFLGSGTYKHNPPAVIKRNILEN--EFYTAYTPYQPEISQGRLQALFELQTMLCELTGMD   80 (398)
T ss_pred             HHHHHHHHHHhcCcCcccCcccccccccCCcCcHHHHHHhccc--cCcccCCCCChhhhhhHHHHHHHHHHHHHHHHCCC
Confidence            7888877642222211111234555455666677776655444  11122332     5667889999999999999986


Q ss_pred             CccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcC----CCCCCEEEEecC
Q 037144          133 KSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVG----IDRKNIRAIKTT  208 (502)
Q Consensus       133 ~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~G----lg~~~v~~v~~~  208 (502)
                      ..       ..+++++|+.+...++..++..  .      .++++|+++...|.+...++..+|    .   +++.+|++
T Consensus        81 ~~-------~v~~~~~g~~~~~~~~~~~~~~--~------~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~---~~~~v~~~  142 (398)
T cd00613          81 VA-------NASLQDEATAAAEAAGLAAIRA--Y------HKRNKVLVPDSAHPTNPAVARTRGEPLGI---EVVEVPSD  142 (398)
T ss_pred             cc-------ceeccCchHHHHHHHHHHHHhc--c------cCCCEEEEcCccCcchHHHHHHhcccCCc---EEEEeccC
Confidence            53       3566665555544454444332  0      037789999999999988888887    7   89999986


Q ss_pred             CCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCCh-hHHHHHHHHhCCEEEeecccccccccCccchhhhc
Q 037144          209 KSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPL-KPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFID  287 (502)
Q Consensus       209 ~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl-~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~  287 (502)
                      +  ++.+|+++|++++.+++      .+|+++.++ ++|.+.|+ ++|+++|++||+|+++|++++.+....+...    
T Consensus       143 ~--~~~~d~~~l~~~i~~~t------~~viv~~~~-~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~~~~~~~~----  209 (398)
T cd00613         143 E--GGTVDLEALKEEVSEEV------AALMVQYPN-TLGVFEDLIKEIADIAHSAGALVYVDGDNLNLTGLKPPGE----  209 (398)
T ss_pred             C--CCCcCHHHHHHhcCCCe------EEEEEECCC-CCceecchHHHHHHHHHhcCCEEEEEeccccccCCCChHH----
Confidence            4  35899999999886543      367788776 68999885 9999999999999999999876544332211    


Q ss_pred             CCCCCCeeEEccCCcCCCCC-----cceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCC----cccccCCC--
Q 037144          288 GVECVDSFSFNPHKWLFTTL-----DCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYK----DWQITLCR--  356 (502)
Q Consensus       288 ~~~~aDsi~~~~hK~l~~p~-----~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~----~~~~~~sr--  356 (502)
                        .++|+++.++|||+ .|.     ++|++++++. .. +.+.....+........  .....+..    ....+.++  
T Consensus       210 --~~~d~~~~s~~K~~-~p~g~Ggp~~g~l~~~~~-~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~r~e~~~~~  282 (398)
T cd00613         210 --YGADIVVGNLQKTG-VPHGGGGPGAGFFAVKKE-LV-RFLPGRLVGVTKDAEGN--RAFRLALQTREQHIRREKATSN  282 (398)
T ss_pred             --cCCCEEEeeccccC-CCCCCCCCceeEEEEhhh-hH-hhCCCCeeccccccCCC--cceEEecccchhhccccccccc
Confidence              17999999999999 663     4667776543 22 22211100000000000  00000000    00000111  


Q ss_pred             -----CCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCC
Q 037144          357 -----RFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGT  431 (502)
Q Consensus       357 -----~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~  431 (502)
                           ...+...|.++..++.++++++.++..+++++++++|+++++......+...+++|++....             
T Consensus       283 ~~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~v~~~~~~~~-------------  349 (398)
T cd00613         283 ICTGQALLALMAAMYIVYLGPEGLKEIAERAHLNANYLAKRLKEVGGVLPFNGPFFHEFVLRLPPLY-------------  349 (398)
T ss_pred             ceecHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCeeEEEEEEcCCcc-------------
Confidence                 11224566777778999999999999999999999999986554222234455666654210             


Q ss_pred             cccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHH
Q 037144          432 YDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVV  495 (502)
Q Consensus       432 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l  495 (502)
                                   +....++.++|.++|... ......+...+|++.. ..++++|||++++.|
T Consensus       350 -------------~~~~~~~~~~L~~~gi~~-~~~~~~~~~~lRis~~-~~~t~edid~~~~~L  398 (398)
T cd00613         350 -------------GIRAEDLAKALIDGGFHA-PTMYLPVDGTLMIEPT-ETETKEELDALLEAL  398 (398)
T ss_pred             -------------hHHHHHHHHhhhhcCccc-cccccCCCCeEEEEcC-CCCCHHHHHHHHHhC
Confidence                         012346677777778643 2211234568999985 667788999999864

This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.

>TIGR01814 kynureninase kynureninase

Probab=99.96  E-value=3.4e-26  Score=235.26  Aligned_cols=356  Identities=12%  Similarity=0.082  Sum_probs=226.8

Q ss_pred             CCcccccCCCCCCHHHHHHHHHHhhcC----CCCcccccC-hhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCch
Q 037144           76 SPNYFAYFPATSSVAGIVGEMLSSGFN----VVGLDWISS-PAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTC  150 (502)
Q Consensus        76 ~p~~~~~~~~~~~~~~~~~~~l~~~~n----~~~~~~~~~-p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt  150 (502)
                      +..||++...++. |..+.+.+..+++    +....|..+ .....++.+..+ + +++|.+.+       ..+||+|+|
T Consensus        27 ~~iyld~~a~g~~-p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~l~g~~~~-------~v~~~~~~t   96 (406)
T TIGR01814        27 AVIYLDGNSLGLM-PKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLK-L-RLVGAKED-------EVVVMNTLT   96 (406)
T ss_pred             CcEEecCCCcCcC-cHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhcc-c-cccCCCCC-------cEEEeCCch
Confidence            3467776665654 6666666654442    222222221 222334444433 4 88998654       689999999


Q ss_pred             HHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH----HHHHHcCCCCCCE----EEEecCCCCCcccCHHHHHH
Q 037144          151 EALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ----KAAQIVGIDRKNI----RAIKTTKSSSYGLSAESVLS  222 (502)
Q Consensus       151 ~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~----~aa~~~Glg~~~v----~~v~~~~~~~~~~d~~~Le~  222 (502)
                      +++..++......        +.++.+|+++...|.|..    ..++..|+   ++    +.++.+.  ++.+|++++++
T Consensus        97 ~~l~~~~~~~~~~--------~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~---~~~~~~~~~~~~~--~g~~~~~~l~~  163 (406)
T TIGR01814        97 INLHLLLASFYKP--------TPKRYKILLEAKAFPSDHYAIESQLQLHGL---TVEESMVQIEPRE--EETLRLEDILD  163 (406)
T ss_pred             HHHHHHHHHhcCC--------cCCccEEEecCCCCChHHHHHHHHHHhcCC---CcccceEEeccCC--CCccCHHHHHH
Confidence            9876665543110        112447888889998843    34566788   76    4566543  46889999999


Q ss_pred             HHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCc
Q 037144          223 QINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKW  302 (502)
Q Consensus       223 ~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~  302 (502)
                      .++...   ..+.+|++++.++.+|.+.|+++|+++|+++|++++||++++.+.++++-..      .++|++++++|||
T Consensus       164 ~~~~~~---~~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~~id~~~------~gvD~~~~s~hK~  234 (406)
T TIGR01814       164 TIEKNG---DDIAVILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNVPLDLHD------WGVDFACWCTYKY  234 (406)
T ss_pred             HHHhcC---CCeEEEEEeccccccceecCHHHHHHHHHHcCCEEEEEcccccCCccccccc------CCCCEEEEcCccc
Confidence            886421   2345899999999999999999999999999999999999999888765321      1799999999999


Q ss_pred             CCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCC--CCchHHHHHHHHhcHHHHHHHHH
Q 037144          303 LFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRR--FRSLKLWVVIRNFGVANLRNFIR  380 (502)
Q Consensus       303 l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~--~~al~~~~~l~~~g~~g~~~~~~  380 (502)
                      ++.|+| |+++++++... ........|.....................++.+.+  ...+.+..+++.+...|++++.+
T Consensus       235 l~g~pG-~~l~v~~~~~~-~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~  312 (406)
T TIGR01814       235 LNAGPG-AGAFVHEKHAH-TERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALRK  312 (406)
T ss_pred             cCCCCC-eEEEEehhhhh-hcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHH
Confidence            986767 66666554321 111111122111000000000000011111111211  12235556777776778899999


Q ss_pred             HHHHHHHHHHHHHhcC----CCeEEecCC----CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHH
Q 037144          381 SHVGMAKLFERLVTSD----KRFEVAFPR----NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELL  452 (502)
Q Consensus       381 ~~~~la~~l~~~l~~~----~~~~l~~~~----~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  452 (502)
                      +...+++++++.|++.    ++++++.+.    ..++++|.++ ..                             ...+.
T Consensus       313 ~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~-~~-----------------------------~~~~~  362 (406)
T TIGR01814       313 KSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHP-VP-----------------------------GKAVF  362 (406)
T ss_pred             HHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEec-CC-----------------------------HHHHH
Confidence            9999999999999875    469888652    2457888765 21                             23566


Q ss_pred             HHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144          453 ESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHL  499 (502)
Q Consensus       453 ~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~  499 (502)
                      +.|.++|.+ +.   ..+...+|+|+++++|+++||++++++|+++.
T Consensus       363 ~~L~~~gi~-v~---~~~~~~iRiS~~~~~nt~~did~l~~~l~~~~  405 (406)
T TIGR01814       363 QALIKRGVI-GD---KREPSVIRVAPVPLYNTFVDVYDAVNVLEEIL  405 (406)
T ss_pred             HHHHHCCEE-Ee---ccCCCeEEEechhccCCHHHHHHHHHHHHHHh
Confidence            677777764 32   22335899998666788889999999998864

This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.

>PRK02948 cysteine desulfurase; Provisional

Probab=99.95  E-value=2.4e-26  Score=234.73  Aligned_cols=341  Identities=11%  Similarity=0.105  Sum_probs=225.0

Q ss_pred             ccccCCCCCCHHHHHHHHHHhhc----CCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHH
Q 037144           79 YFAYFPATSSVAGIVGEMLSSGF----NVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALL  154 (502)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~l~~~~----n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~  154 (502)
                      ||++-..++.++.+ .+.+..++    .+....+..+.....+.+++++.+++++|.+.+       ..++++|+|+++.
T Consensus         3 yld~a~~~~~~~~v-~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-------~i~~~~g~t~a~~   74 (381)
T PRK02948          3 YLDYAATTPMSKEA-LQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGEEQ-------GIYFTSGGTESNY   74 (381)
T ss_pred             eccCCCCCCCCHHH-HHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCCCC-------eEEEeCcHHHHHH
Confidence            56665555544444 33333333    222233445556667788899999999998754       5889999999998


Q ss_pred             HHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHH---HHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcC
Q 037144          155 CTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKA---AQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAE  231 (502)
Q Consensus       155 ~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a---a~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g  231 (502)
                      .++.+....+.       .++++|+++...|+|+...   ++..|+   +++.+|+++  ++.+|+++|++++++.    
T Consensus        75 ~~~~~~~~~~~-------~~g~~vv~~~~~h~s~~~~~~~~~~~g~---~v~~v~~~~--~~~~d~~~l~~~l~~~----  138 (381)
T PRK02948         75 LAIQSLLNALP-------QNKKHIITTPMEHASIHSYFQSLESQGY---TVTEIPVDK--SGLIRLVDLERAITPD----  138 (381)
T ss_pred             HHHHHHHHhcc-------CCCCEEEECCcccHHHHHHHHHHHhCCC---EEEEEeeCC--CCCCCHHHHHHhcCCC----
Confidence            87776653210       1467888999999887665   455687   999999875  4689999999988643    


Q ss_pred             CccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceE
Q 037144          232 LIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCC  311 (502)
Q Consensus       232 ~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~  311 (502)
                        +.+|++++++|++|.+.|+++|.++|+++|+++|||++++.+....+- ..     .++|+++.++||+++ |.|+|+
T Consensus       139 --~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~vivD~~~~~g~~~~~~-~~-----~~~d~~~~s~~K~~g-p~G~G~  209 (381)
T PRK02948        139 --TVLASIQHANSEIGTIQPIAEIGALLKKYNVLFHSDCVQTFGKLPIDV-FE-----MGIDSLSVSAHKIYG-PKGVGA  209 (381)
T ss_pred             --CEEEEEECCcCCcEeehhHHHHHHHHHHcCCEEEEEChhhccccccCc-cc-----CCCCEEEecHHhcCC-CCcEEE
Confidence              348999999999999999999999999999999999988665543321 11     179999999999764 888999


Q ss_pred             EEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHH
Q 037144          312 LWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFER  391 (502)
Q Consensus       312 ~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~  391 (502)
                      +++++...+..       ........     .  .+..++   .......++..+++.. .++..+..++..++++++.+
T Consensus       210 l~~~~~~~~~~-------~~~~~~~~-----~--~~~~~t---~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~~l~~  271 (381)
T PRK02948        210 VYINPQVRWKP-------VFPGTTHE-----K--GFRPGT---VNVPGIAAFLTAAENI-LKNMQEESLRFKELRSYFLE  271 (381)
T ss_pred             EEEcCCCCCCC-------cccCCCCC-----C--CcCCCC---ccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence            99875521110       00000000     0  000000   0011223444455443 35678888999999999999


Q ss_pred             HHhcCCCeEEecC--C--C-eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEee
Q 037144          392 LVTSDKRFEVAFP--R--N-FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHA  466 (502)
Q Consensus       392 ~l~~~~~~~l~~~--~--~-~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~  466 (502)
                      .|+++ ++++...  +  . ..++.|......                             ..++...|.++|+.+..+.
T Consensus       272 ~L~~~-~~~v~~~~~~~~~~~~i~~~~~~~~~-----------------------------~~~~~~~l~~~gI~v~~g~  321 (381)
T PRK02948        272 QIQTL-PLPIEVEGHSTSCLPHIIGVTIKGIE-----------------------------GQYTMLECNRRGIAISTGS  321 (381)
T ss_pred             HHhcC-CCCEEEeCCCccCcCCEEEEEeCCCC-----------------------------HHHHHHhcccCCEEEEchH
Confidence            99988 5554421  1  1 235556553211                             2344556666676543221


Q ss_pred             e----E---------------CCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          467 I----V---------------GGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       467 ~----~---------------~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      .    +               ....++|+|++ +.++++|+++++++|+++.+.
T Consensus       322 ~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~-~~~t~~di~~l~~~l~~~~~~  374 (381)
T PRK02948        322 ACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFG-QQTTKDQIDTTIHALETIGNQ  374 (381)
T ss_pred             hcCCCCCCCCHHHHHcCCChHHhCceEEEEcC-CCCCHHHHHHHHHHHHHHHHH
Confidence            1    1               12468999986 567788999999999988764

>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily

Probab=99.95  E-value=7e-26  Score=232.59  Aligned_cols=340  Identities=12%  Similarity=0.093  Sum_probs=224.7

Q ss_pred             cccccCCCCCCHHHHHHHHHHhhcCCC----CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHH
Q 037144           78 NYFAYFPATSSVAGIVGEMLSSGFNVV----GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEAL  153 (502)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~l~~~~n~~----~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~  153 (502)
                      .||++...++.++. +.+.+...+...    ...|..+....++..++++.+++++|.+..       ..++++|+|+++
T Consensus        19 ~yl~~~~~~~~p~~-v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~~~-------~v~~~~~~t~~l   90 (397)
T TIGR01976        19 VFFDNPAGTQIPQS-VADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNADPP-------EVVFGANATSLT   90 (397)
T ss_pred             EEecCCccCCCCHH-HHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCCCC-------eEEEeCCHHHHH
Confidence            67777555554444 444444433211    123433445566778899999999998754       478889988887


Q ss_pred             HHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH----HHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHh
Q 037144          154 LCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ----KAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVE  229 (502)
Q Consensus       154 ~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~----~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~  229 (502)
                      ...+.+.... .       .+++.|+++...|+|..    ..++..|+   +++.++++++ ++.+|+++|+++|++++ 
T Consensus        91 ~~~~~~~~~~-~-------~~gd~vl~~~~~~~s~~~~~~~~~~~~g~---~~~~~~~~~~-~~~~~~~~l~~~i~~~~-  157 (397)
T TIGR01976        91 FLLSRAISRR-W-------GPGDEVIVTRLDHEANISPWLQAAERAGA---KVKWARVDEA-TGELHPDDLASLLSPRT-  157 (397)
T ss_pred             HHHHHHHHhc-C-------CCCCEEEEcCCchHhHHHHHHHHHHhcCC---EEEEEecccc-CCCcCHHHHHHhcCCCc-
Confidence            5444333111 0       15678889988997753    56677899   9999998753 46899999999996543 


Q ss_pred             cCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcc
Q 037144          230 AELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDC  309 (502)
Q Consensus       230 ~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~  309 (502)
                           .+|++++++|++|.+.|+++|+++|+++|++++||++++.+..+.+ ...     .++|++++++|||++ |. +
T Consensus       158 -----~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~-~~~-----~~~d~~~~s~~K~~g-~~-~  224 (397)
T TIGR01976       158 -----RLVAVTAASNTLGSIVDLAAITELVHAAGALVVVDAVHYAPHGLID-VQA-----TGADFLTCSAYKFFG-PH-M  224 (397)
T ss_pred             -----eEEEEeCCCCCCCccCCHHHHHHHHHHcCCEEEEehhhhccccCCC-HHH-----cCCCEEEEechhhcC-Cc-e
Confidence                 4899999999999999999999999999999999999966543322 111     178999999999985 43 8


Q ss_pred             eEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCC-CCC-CchHHHHHHHHhcHH--------------
Q 037144          310 CCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLC-RRF-RSLKLWVVIRNFGVA--------------  373 (502)
Q Consensus       310 g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~s-r~~-~al~~~~~l~~~g~~--------------  373 (502)
                      |+++++++ .+.........|.....             ...++.+ +.+ ..+.+..+++.+...              
T Consensus       225 G~l~~~~~-~~~~l~~~~~~~~~~~~-------------~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~  290 (397)
T TIGR01976       225 GILWGRPE-LLMNLPPYKLTFSYDTG-------------PERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVA  290 (397)
T ss_pred             EEEEEcHH-HHhhCCCccccCccCCC-------------cchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhH
Confidence            88887654 22211111111211110             0012222 222 234555666655322              


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCeEEecC----CCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHH
Q 037144          374 NLRNFIRSHVGMAKLFERLVTSDKRFEVAFP----RNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNR  449 (502)
Q Consensus       374 g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~----~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  449 (502)
                      ++++..++..++++++++.|+++++++++.+    ...+++.|......                             ..
T Consensus       291 ~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~  341 (397)
T TIGR01976       291 SFQAIDAYENRLAEYLLVGLSDLPGVTLYGVARLAARVPTVSFTVHGLP-----------------------------PQ  341 (397)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccCCCceEEEEeCCcC-----------------------------HH
Confidence            3677788889999999999999988999754    25678877664321                             23


Q ss_pred             HHHHHHHhcCcEEEEeeeE-----------CCEEEEEEEecCCCCcHHHHHHHHHHH
Q 037144          450 ELLESINVSGKVFMTHAIV-----------GGIYVLRFAAGNSMTMESHVRAAWTVV  495 (502)
Q Consensus       450 ~l~~~l~~~g~~~~~~~~~-----------~g~~~lR~~~~~~~t~~~di~~~~~~l  495 (502)
                      .+.++|.++|..+......           ....++|+|++. .++++||++++++|
T Consensus       342 ~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~-~~t~~di~~l~~~l  397 (397)
T TIGR01976       342 RVVRRLADQGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAH-YNTAEEVDRLLEAL  397 (397)
T ss_pred             HHHHHHHHCCeEEEeCccchHHHHHHhCCCCCCCeEEEEeec-cCCHHHHHHHHHhC
Confidence            5677777778654332111           134589999975 56777999999864

This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.

>PRK14012 cysteine desulfurase; Provisional

Probab=99.95  E-value=3.8e-26  Score=234.79  Aligned_cols=341  Identities=15%  Similarity=0.120  Sum_probs=219.7

Q ss_pred             CcccccCCCCCCHHHHHHHHHHhhcC---CCCcccc----cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCc
Q 037144           77 PNYFAYFPATSSVAGIVGEMLSSGFN---VVGLDWI----SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTT  149 (502)
Q Consensus        77 p~~~~~~~~~~~~~~~~~~~l~~~~n---~~~~~~~----~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~gg  149 (502)
                      +.||++...++.++.+ .+.+..++.   .......    .+-.....-+++.+++++++|.+.+       .+++++||
T Consensus         4 ~iyld~a~~~~~~~~v-~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~-------~v~~~~g~   75 (404)
T PRK14012          4 PIYLDYSATTPVDPRV-AEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGADPR-------EIVFTSGA   75 (404)
T ss_pred             eEEecCcCCCCCCHHH-HHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcC-------eEEEeCCH
Confidence            3577777666655554 444433332   2111111    1111223445678889999998754       58999999


Q ss_pred             hHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH---cCCCCCCEEEEecCCCCCcccCHHHHHHHHHH
Q 037144          150 CEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI---VGIDRKNIRAIKTTKSSSYGLSAESVLSQINL  226 (502)
Q Consensus       150 t~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~---~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~  226 (502)
                      |+++..++.+......+       +++.|+++..+|+++..+++.   .|+   +++.+++++  ++.+|+++|+++|++
T Consensus        76 t~al~~~l~~l~~~~~~-------~gd~Vi~~~~~~~s~~~~~~~~~~~g~---~~~~v~~~~--~g~~d~~~l~~~i~~  143 (404)
T PRK14012         76 TESDNLAIKGAAHFYQK-------KGKHIITSKTEHKAVLDTCRQLEREGF---EVTYLDPQS--NGIIDLEKLEAAMRD  143 (404)
T ss_pred             HHHHHHHHHHHHHhhcC-------CCCEEEEecCccHHHHHHHHHHHhCCC---EEEEEccCC--CCcCCHHHHHHhcCC
Confidence            99998887766432111       567899999999988666544   488   999999875  568999999999976


Q ss_pred             HHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC
Q 037144          227 DVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT  306 (502)
Q Consensus       227 ~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p  306 (502)
                      ++      .+|++++.+|++|.+.|+++|.++|+++|+++|+|+|++.+..+.+-. .     .++|++++++||++ +|
T Consensus       144 ~t------~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~vivD~a~~~g~~~~~~~-~-----~~~D~~~~s~~K~~-gp  210 (404)
T PRK14012        144 DT------ILVSIMHVNNEIGVIQDIAAIGEICRERGIIFHVDAAQSVGKVPIDLS-K-----LKVDLMSFSAHKIY-GP  210 (404)
T ss_pred             CC------EEEEEECcCCCccchhhHHHHHHHHHHcCCEEEEEcchhcCCcccCcc-c-----CCCCEEEEehhhcc-CC
Confidence            44      388999999999999999999999999999999999998876654321 1     16999999999955 57


Q ss_pred             CcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCC-CC-CchHHHHHHHHhcHHHHHHHHHHHHH
Q 037144          307 LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCR-RF-RSLKLWVVIRNFGVANLRNFIRSHVG  384 (502)
Q Consensus       307 ~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr-~~-~al~~~~~l~~~g~~g~~~~~~~~~~  384 (502)
                      .|+|+++++++...    ...+.+.... ..            ..++.+. .. ..+.+-.++... ..+..++.++..+
T Consensus       211 ~g~G~l~~~~~~~~----~~~~~~~g~~-~~------------~~~~~gt~~~~~~~~l~~al~~~-~~~~~~~~~~~~~  272 (404)
T PRK14012        211 KGIGALYVRRKPRV----RLEAQMHGGG-HE------------RGMRSGTLPTHQIVGMGEAARIA-KEEMATENERIRA  272 (404)
T ss_pred             CceEEEEEecCCCC----CCCceecCCC-cc------------CCccCCCcCHHHHHHHHHHHHHH-HhhHHHHHHHHHH
Confidence            89999999876321    1111111110 00            0011111 10 112223444433 3456778899999


Q ss_pred             HHHHHHHHHhcCCCeEEecCC-----CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh--
Q 037144          385 MAKLFERLVTSDKRFEVAFPR-----NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV--  457 (502)
Q Consensus       385 la~~l~~~l~~~~~~~l~~~~-----~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--  457 (502)
                      +++++.+.|++++++.+..++     ....++|...+.                           +    .+...+..  
T Consensus       273 l~~~l~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~~~---------------------------~----~~~~~l~~~~  321 (404)
T PRK14012        273 LRDRLWNGIKDIEEVYLNGDLEQRVPGNLNVSFNYVEG---------------------------E----SLIMALKDLA  321 (404)
T ss_pred             HHHHHHHHHhcCCCEEEeCCccccCCCEEEEEEeCcCH---------------------------H----HHHHhCCCeE
Confidence            999999999999998876431     122344444221                           1    22233221  


Q ss_pred             --cCcEEEEeee--------------ECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          458 --SGKVFMTHAI--------------VGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       458 --~g~~~~~~~~--------------~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                        .|.. +.+..              ......+|+++. +.++++|||++++.|+++++.
T Consensus       322 i~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~-~~~t~~dvd~~~~~l~~~~~~  379 (404)
T PRK14012        322 VSSGSA-CTSASLEPSYVLRALGLNDELAHSSIRFSLG-RFTTEEEIDYAIELVRKSIGK  379 (404)
T ss_pred             EEchhh-hCCCCCCCCHHHHHcCCChhhcCceEEEEec-CCCCHHHHHHHHHHHHHHHHH
Confidence              1211 11110              012368999986 557888999999999987653

>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase

Probab=99.95  E-value=2.5e-24  Score=218.07  Aligned_cols=310  Identities=14%  Similarity=0.101  Sum_probs=208.8

Q ss_pred             HHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCC
Q 037144          118 ENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGI  197 (502)
Q Consensus       118 e~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Gl  197 (502)
                      .+++.+.+++++|.+         ..++++|+++++..++.+...           +++.|+++..+|++...+++..|+
T Consensus        46 ~~~l~~~la~~~g~~---------~i~~~~g~t~al~~~l~~~~~-----------~gd~Vl~~~~~~~~~~~~~~~~g~  105 (361)
T cd06452          46 IKDFHHDLAEFLGMD---------EARVTPGAREGKFAVMHSLCE-----------KGDWVVVDGLAHYTSYVAAERAGL  105 (361)
T ss_pred             HHHHHHHHHHHcCCc---------eEEEeCCHHHHHHHHHHHhcC-----------CCCEEEEcCCcchHHHHHHHhcCC
Confidence            334556688899982         478999999998877765532           677888899999999999999999


Q ss_pred             CCCCEEEEecCCCCCcccCHHHHHHHHHHHHhc-CCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccccccc
Q 037144          198 DRKNIRAIKTTKSSSYGLSAESVLSQINLDVEA-ELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSA  276 (502)
Q Consensus       198 g~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~-g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~  276 (502)
                         +++.+|+++++++.+|+++|++++++..+. +..+.+|++++++|++|.+.|+++|+++|+++|+++|+|+||+.+.
T Consensus       106 ---~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~  182 (361)
T cd06452         106 ---NVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAKVCHEYGVPLLLNGAYTVGR  182 (361)
T ss_pred             ---EEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHHHHHHHHHHcCCeEEEECCcccCC
Confidence               999999986545799999999999754322 2245688899999999999999999999999999999999998665


Q ss_pred             ccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCccc-ccCC
Q 037144          277 CICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQ-ITLC  355 (502)
Q Consensus       277 ~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~-~~~s  355 (502)
                      ...+.. ..     ++|+++.++||+++.|.++|++++++. ......... .++..              ...+ +..+
T Consensus       183 ~~~~~~-~~-----~~d~~~~s~~K~l~~~~~~G~l~~~~~-~~~~l~~~~-~~~~~--------------~~~~~~~~~  240 (361)
T cd06452         183 MPVSGK-EL-----GADFIVGSGHKSMAASAPIGVLATTEE-WADIVFRTS-QMFKI--------------KEVELLGCT  240 (361)
T ss_pred             cCCCHH-Hc-----CCCEEEecCCccccCCCCeEEEEECHH-HHHHHhccc-ccccc--------------ceeeeeccc
Confidence            433221 11     689999999999998888998887643 333221211 11110              0001 1111


Q ss_pred             CC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec--CCCeeEEEEEeecCcchhhhhhcccCCCc
Q 037144          356 RR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAF--PRNFSLVCFRVTPSAVMDKLRTKYKNGTY  432 (502)
Q Consensus       356 r~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~--~~~~~~v~f~~~~~~~~~~~~~~~~~~~~  432 (502)
                      .+ ..+..++.++..+ .+.+ +..++..++++++++.|+++||++++.  +...+++.|+.......            
T Consensus       241 ~~~~~~~~~~~al~~~-~~~~-~~~~~~~~~~~~l~~~L~~l~g~~v~~~~~~~~n~~~~~~~~~~~~------------  306 (361)
T cd06452         241 LRGAPLVTLMASFPHV-KERV-KRWDEEVEKARWFVAELEKIEGIKQLGEKPKNHDLMFFETPSFDEI------------  306 (361)
T ss_pred             cCchHHHHHHHHHHHH-HHHH-HHHHHHHHHHHHHHHHHhcCCCeEEECCCCCCCceEEEEcCCcchh------------
Confidence            11 2233445555443 2333 445556677899999999999999874  33456666665311000            


Q ss_pred             ccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144          433 DQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHL  499 (502)
Q Consensus       433 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~  499 (502)
                              .........++.+.|.++|... ..  .....++|+++..  .+++++++++++|+++.
T Consensus       307 --------~~~~~~~~~~~~~~L~~~gI~~-~~--~~~~~~~ri~~~g--~~~e~~~~l~~al~~~~  360 (361)
T cd06452         307 --------AKKHKRRGYFLYSELKKRGIHG-IK--PGLTRYFKLSTYG--LTWEQVEYVVDAFKEIA  360 (361)
T ss_pred             --------hhhccccchhHHHHHHHcCceE-Ec--CCCceEEEEEecC--CCHHHHHHHHHHHHHHh
Confidence                    0000001125777887778752 11  1223589998743  36679999999998764

This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.

>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]

Probab=99.94  E-value=1.5e-25  Score=219.22  Aligned_cols=222  Identities=16%  Similarity=0.165  Sum_probs=166.4

Q ss_pred             CCCcccccCCCCCCHHHHHHHH---HHhhc-CCCCcccccChhh-HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCc
Q 037144           75 QSPNYFAYFPATSSVAGIVGEM---LSSGF-NVVGLDWISSPAA-VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTT  149 (502)
Q Consensus        75 ~~p~~~~~~~~~~~~~~~~~~~---l~~~~-n~~~~~~~~~p~~-~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~gg  149 (502)
                      ..|-|++....++..|.++..+   +..++ |+...  ..+..+ ..+| ++++.+++++|.++.       +.+||+|+
T Consensus        42 ~~~vyld~~at~p~~~~Vldam~~~~~~~~~nPh~~--~y~w~~~~~~E-~aR~~VAklInAd~~-------dIiFts~A  111 (428)
T KOG1549|consen   42 TRPVYLDNQATGPMDPRVLDAMLPYLLEYLGNPHSR--SYGWKAEDAVE-AAREQVAKLINADPS-------DIVFTSGA  111 (428)
T ss_pred             CccEEEecCcCCCCCHHHHHHHHHHHHHhhcCCCcc--ccchhhhHHHH-HHHHHHHHHhCCCCC-------cEEEeCCc
Confidence            4677888887777777665443   33333 33322  111222 2344 578999999999876       69999999


Q ss_pred             hHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc---CCCCCCEEEEecCCCCCcccCHHHHHHHHHH
Q 037144          150 CEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV---GIDRKNIRAIKTTKSSSYGLSAESVLSQINL  226 (502)
Q Consensus       150 t~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~---Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~  226 (502)
                      ||||.+++...-.. .+.    + .+-.|+....+|.|+..+++.+   |+   .|+.+|++.  ++..|.+.+++.|++
T Consensus       112 TEs~Nlvl~~v~~~-~~~----~-~~k~iitl~~eH~~v~~s~~~l~~~g~---~Vt~lpv~~--~~~~d~~~~~~~i~~  180 (428)
T KOG1549|consen  112 TESNNLVLKGVARF-FGD----K-TKKHIITLQTEHPCVLDSCRALQEEGL---EVTYLPVED--SGLVDISKLREAIRS  180 (428)
T ss_pred             hHHHHHHHHHhhcc-ccc----c-ccceEEEecccCcchhHHHHHHHhcCe---EEEEeccCc--cccccHHHHHHhcCC
Confidence            99998777654221 111    1 1227788889999988877655   87   999999983  579999999999999


Q ss_pred             HHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC
Q 037144          227 DVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT  306 (502)
Q Consensus       227 ~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p  306 (502)
                      +++      +|.+.+.++..|.+.|++||+.+|+++|+.+|+|+||+.+....+- ..+     ++|+++++.|||++.|
T Consensus       181 ~T~------lv~I~~Vnn~~gv~~Pv~EI~~icr~~~v~v~~DaAQavG~i~vDV-~el-----n~D~~s~s~HK~ygp~  248 (428)
T KOG1549|consen  181 KTR------LVSIMHVNNEIGVLQPVKEIVKICREEGVQVHVDAAQAVGKIPVDV-QEL-----NADFLSISAHKIYGPP  248 (428)
T ss_pred             Cce------EEEEEecccCccccccHHHHHHHhCcCCcEEEeehhhhcCCccccH-HHc-----CchheeeecccccCCC
Confidence            775      8999999999999999999999999999999999999999888763 333     8999999999999877


Q ss_pred             CcceEEEeeCchhhhhhhcCCcccccC
Q 037144          307 LDCCCLWVKDPSCLLSTLSTNPQYLKN  333 (502)
Q Consensus       307 ~~~g~~~~r~~~~l~~~~~~~~~yl~~  333 (502)
                      . +|++|+|....   .....+.+..+
T Consensus       249 ~-iGaLYvr~~~~---~~~~~p~~~GG  271 (428)
T KOG1549|consen  249 G-IGALYVRRKRP---RLRVEPPLSGG  271 (428)
T ss_pred             c-ceEEEEccCCC---cccccCcccCC
Confidence            5 99999987221   23344555544

>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase

Probab=99.94  E-value=8e-25  Score=221.98  Aligned_cols=342  Identities=11%  Similarity=0.065  Sum_probs=226.4

Q ss_pred             cCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHH
Q 037144           82 YFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAAR  161 (502)
Q Consensus        82 ~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~  161 (502)
                      +.|++......+.+.+....    ..+  .+.+..+.+++++.+++++|.++..     ...++|+|||+++..++....
T Consensus         7 ~~pgp~~~~~~v~~~~~~~~----~~~--~~~~~~~~~~~r~~la~l~~~~~~~-----~~i~~t~~~t~al~~~~~~l~   75 (363)
T TIGR02326         7 LTPGPLTTSRTVKEAMLFDW----CTW--DSDYNIVVEQIRQQLLALATAEEGY-----TSVLLQGSGTFAVEAVIGSAV   75 (363)
T ss_pred             ecCCCCCCCHHHHHHhCCCC----CCC--ChHHHHHHHHHHHHHHHHhCCCCCc-----eEEEEcCCCHHHHHHHHHhcC
Confidence            44555554444444443322    122  2456667778999999999997531     147899999999977665543


Q ss_pred             HHHHHHhCccCCCCeEEEeCCCCchh-HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEe
Q 037144          162 DRVLKKIGRENISKLVVYSSDQTHCA-FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCAT  240 (502)
Q Consensus       162 ~~~~~~~~~~~~~~~~v~~s~~~H~s-~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t  240 (502)
                      ..          ++.+++++...|.+ +.+.++..|+   +++.+|+++  ++.+|++++++++++.++    +.+|.++
T Consensus        76 ~~----------~~~vlv~~~~~~~~~~~~~a~~~g~---~~~~v~~~~--~~~~d~~~l~~~l~~~~~----~~~v~~~  136 (363)
T TIGR02326        76 PK----------DGKLLVVINGAYGARIVQIAEYLGI---PHHVVDTGE--VEPPDVVEVEAILAADPA----ITHIALV  136 (363)
T ss_pred             CC----------CCeEEEEeCChhhHHHHHHHHHcCC---ceEEEeCCC--CCCCCHHHHHHHHhhCCC----ccEEEEE
Confidence            21          44556666555555 4577888999   999999875  458999999999876421    2367888


Q ss_pred             cCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhh
Q 037144          241 VGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCL  320 (502)
Q Consensus       241 ~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l  320 (502)
                      +.+|++|.+.|+++|+++|++||++++||++++.+..+.+- ..    + ++|+++.++|||+++|.|.|+++++++.. 
T Consensus       137 ~~~~~tG~~~~i~~I~~l~~~~g~~livD~~~~~g~~~~~~-~~----~-~~D~~~~s~~K~l~~p~G~G~l~~~~~~~-  209 (363)
T TIGR02326       137 HCETTTGILNPIEAVAKLAHRHGKVTIVDAMSSFGGIPIDI-AE----L-HIDYLISSANKCIQGVPGFGFVIARQAEL-  209 (363)
T ss_pred             eecCCccccCcHHHHHHHHHHcCCEEEEEccccccCcccch-hh----c-CccEEEecCccccccCCcceEEEECHHHH-
Confidence            88999999999999999999999999999988766554431 11    1 68999999999999999999999876532 


Q ss_pred             hhhhcCCcc-cccCccCCCCCcccccCCCcccccCCCCC-----CchHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHH
Q 037144          321 LSTLSTNPQ-YLKNEATDQEPKEQEVGYKDWQITLCRRF-----RSLKLWVVIRNFGVA-NLRNFIRSHVGMAKLFERLV  393 (502)
Q Consensus       321 ~~~~~~~~~-yl~~~~~~~~~~~~~~~~~~~~~~~sr~~-----~al~~~~~l~~~g~~-g~~~~~~~~~~la~~l~~~l  393 (502)
                      ........+ |+....        .+..... ....+++     ..+++..+++.+..+ +++++.+++.++++++++.|
T Consensus       210 ~~~~~~~~~~~~~~~~--------~~~~~~~-~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L  280 (363)
T TIGR02326       210 AACKGNARSLSLDLYD--------QWRCMED-NHGKWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGM  280 (363)
T ss_pred             HHhhcCCCceeecHHH--------HHHHHhc-cCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHH
Confidence            221111111 110000        0000000 0011111     224556667666555 58888999999999999999


Q ss_pred             hcCCCeEEecCC--CeeE-EEEEeecC-cchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC
Q 037144          394 TSDKRFEVAFPR--NFSL-VCFRVTPS-AVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG  469 (502)
Q Consensus       394 ~~~~~~~l~~~~--~~~~-v~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~  469 (502)
                      +++ |++++.++  ..++ ++|++++. ..                           ....+.+.|.++|.++. ++...
T Consensus       281 ~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~v~~~L~~~gi~v~-~g~~~  331 (363)
T TIGR02326       281 RAL-GFEPLLDDEIQSPIITSFYSPEDPDY---------------------------RFADFYQRLKEQGFVIY-PGKVS  331 (363)
T ss_pred             HHc-CCeeccCcccCCceEEEEECCCCCCC---------------------------CHHHHHHHHHHCCEEEE-CCcCC
Confidence            988 78887543  3444 45665431 00                           02356777777776543 33222


Q ss_pred             CEEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144          470 GIYVLRFAAGNSMTMESHVRAAWTVVQEHL  499 (502)
Q Consensus       470 g~~~lR~~~~~~~t~~~di~~~~~~l~~~~  499 (502)
                      +..++|++++.+ .+.+|+++++++|+++.
T Consensus       332 ~~~~iRi~~~~~-~~~edv~~~l~~l~~~l  360 (363)
T TIGR02326       332 QVDCFRIGNIGE-VDAADITRLLTAIGKAM  360 (363)
T ss_pred             CCCEEEEecCCC-CCHHHHHHHHHHHHHHh
Confidence            346899997655 46779999999998865

Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.

>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]

Probab=99.94  E-value=1e-24  Score=214.55  Aligned_cols=324  Identities=15%  Similarity=0.100  Sum_probs=233.2

Q ss_pred             ccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCch--
Q 037144          109 ISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHC--  186 (502)
Q Consensus       109 ~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~--  186 (502)
                      ..+|.+..+.+++.+.+..+|+.++..      -.+++++||.++..++.....           ++++|++...+-+  
T Consensus        31 h~s~~F~~~~~~~~~~L~~v~~t~~~~------~~ll~gsGt~amEAav~sl~~-----------pgdkVLv~~nG~FG~   93 (383)
T COG0075          31 HRSPDFVGIMKEVLEKLRKVFGTENGD------VVLLSGSGTLAMEAAVASLVE-----------PGDKVLVVVNGKFGE   93 (383)
T ss_pred             CCCHHHHHHHHHHHHHHHHHhcCCCCc------EEEEcCCcHHHHHHHHHhccC-----------CCCeEEEEeCChHHH
Confidence            456889999999999999999998543      467889999888766665544           5666666655654  


Q ss_pred             hHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEE
Q 037144          187 AFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWV  266 (502)
Q Consensus       187 s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~l  266 (502)
                      .|.+.++.+|.   +++.+...++.  .+|+++++++|+++..    ..+|.++++.|+||..+|+++|+++|++||..+
T Consensus        94 R~~~ia~~~g~---~v~~~~~~wg~--~v~p~~v~~~L~~~~~----~~~V~~vH~ETSTGvlnpl~~I~~~~k~~g~l~  164 (383)
T COG0075          94 RFAEIAERYGA---EVVVLEVEWGE--AVDPEEVEEALDKDPD----IKAVAVVHNETSTGVLNPLKEIAKAAKEHGALL  164 (383)
T ss_pred             HHHHHHHHhCC---ceEEEeCCCCC--CCCHHHHHHHHhcCCC----ccEEEEEeccCcccccCcHHHHHHHHHHcCCEE
Confidence            58889999999   99999998865  8999999999985432    348999999999999999999999999999999


Q ss_pred             Eeeccccccccc--CccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCC-c-ccccCccCCCCCcc
Q 037144          267 HVDAAYAGSACI--CPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTN-P-QYLKNEATDQEPKE  342 (502)
Q Consensus       267 hVDaA~g~~~~~--~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~-~-~yl~~~~~~~~~~~  342 (502)
                      +||+.-+.+...  .+++        ++|.+..+++|+++.|+|.+++.++++..- ...... + -|+.-.....+ ..
T Consensus       165 iVDaVsS~Gg~~~~vd~w--------giDv~itgSQK~l~~PPGla~v~~S~~a~e-~~~~~~~~~~ylDL~~~~~~-~~  234 (383)
T COG0075         165 IVDAVSSLGGEPLKVDEW--------GIDVAITGSQKALGAPPGLAFVAVSERALE-AIEERKHPSFYLDLKKWLKY-ME  234 (383)
T ss_pred             EEEecccCCCcccchhhc--------CccEEEecCchhccCCCccceeEECHHHHH-HHhcCCCCceeecHHHHHHH-Hh
Confidence            999865444433  3444        899999999999999999999999877542 222222 2 24322110000 00


Q ss_pred             cccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC--CeeEEEEEeecCcch
Q 037144          343 QEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR--NFSLVCFRVTPSAVM  420 (502)
Q Consensus       343 ~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~--~~~~v~f~~~~~~~~  420 (502)
                      . .....+|...+   .-.++..+++.+-.+|++++++++.++++++++.++++ ||+++..+  .+++++....|.+.+
T Consensus       235 ~-~~~~p~Tppv~---~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~al-Gl~~~~~~~~~s~tvta~~~P~g~~  309 (383)
T COG0075         235 K-KGSTPYTPPVN---LIYALREALDLILEEGLEARIARHRRLAEALRAGLEAL-GLELFADPERRSPTVTAIKVPEGVD  309 (383)
T ss_pred             h-cCCCCCCCCHH---HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCccccCcccCCCceEEEECCCCCC
Confidence            0 00111111100   12477788888889999999999999999999999998 89998733  355555545554321


Q ss_pred             hhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeE-CCEEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144          421 DKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIV-GGIYVLRFAAGNSMTMESHVRAAWTVVQEHL  499 (502)
Q Consensus       421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~-~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~  499 (502)
                                                 ..++...+.+++.+.++++.. ....++||..+. ..+.+|+.+++.+|..++
T Consensus       310 ---------------------------~~~~~~~~~~~~g~~i~gg~~~l~gkifRIGhMG-~~~~~dv~~~l~ale~~L  361 (383)
T COG0075         310 ---------------------------DKKVRRALLKEYGVEIAGGQGPLKGKIFRIGHMG-NVRPEDVLAALAALEAAL  361 (383)
T ss_pred             ---------------------------cHHHHHHHHHhCCEEecccccccCccEEEEecCc-cCCHHHHHHHHHHHHHHH
Confidence                                       112222455555555555432 234689999998 567779999999999887


Q ss_pred             Hh
Q 037144          500 EA  501 (502)
Q Consensus       500 ~~  501 (502)
                      ++
T Consensus       362 ~~  363 (383)
T COG0075         362 RE  363 (383)
T ss_pred             HH
Confidence            65

>PLN02414 glycine dehydrogenase (decarboxylating)

Probab=99.94  E-value=5.5e-24  Score=233.09  Aligned_cols=328  Identities=13%  Similarity=-0.001  Sum_probs=225.0

Q ss_pred             cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCch----HHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCc
Q 037144          110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTC----EALLCTLTAARDRVLKKIGRENISKLVVYSSDQTH  185 (502)
Q Consensus       110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt----~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H  185 (502)
                      ...+..++-.++.+|+++++|++         .++|+++++    +++++++....+.    .|.  ..+.+|++|..+|
T Consensus       562 ~~~g~~~~~~~~r~~la~i~g~~---------~v~f~pnaga~ge~a~~~vi~~~~~~----~Gd--~~r~~vli~~~aH  626 (993)
T PLN02414        562 QAQGYQEMFEDLGDLLCEITGFD---------SFSLQPNAGAAGEYAGLMVIRAYHLS----RGD--HHRNVCIIPVSAH  626 (993)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCC---------eEEEcCCCcHHHHHHHHHHHHHHHhc----cCC--CCCCEEEeCCCcC
Confidence            33466778889999999999993         479999888    7777666655321    111  1345899999999


Q ss_pred             hhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144          186 CAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW  265 (502)
Q Consensus       186 ~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~  265 (502)
                      .+....+.+.|+   +++.||++.  +|.+|+++|+++|++.+.   ...+|++|+++|..|.++||++|+++|+++|+.
T Consensus       627 ~sn~a~a~~~G~---~vv~v~~d~--~G~vDle~L~~~i~~~~~---~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Gal  698 (993)
T PLN02414        627 GTNPASAAMCGM---KIVVVGTDA--KGNINIEELRKAAEAHKD---NLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQ  698 (993)
T ss_pred             ccCHHHHHHCCC---EEEEeccCC--CCCcCHHHHHHHHhccCC---CeEEEEEECCCccccccchHHHHHHHHHHcCCE
Confidence            999999999999   999999975  569999999999985321   135899999999999999999999999999999


Q ss_pred             EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc-----ceEEEeeCchhhhhhhcCCcccccCccCCCCC
Q 037144          266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD-----CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEP  340 (502)
Q Consensus       266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~-----~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~  340 (502)
                      ++||||+..+..........     ++|+++++.||||+.|.|     +|++++++.  +..   ..+.+.....     
T Consensus       699 v~vDgAq~~a~~~l~~p~~~-----GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~--L~p---~lPg~~v~~~-----  763 (993)
T PLN02414        699 VYMDGANMNAQVGLTSPGFI-----GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--LAP---FLPSHPVVPT-----  763 (993)
T ss_pred             EEEEecCHHhccCcCCcccc-----CCCEEEecCCccCCcCcccCCCCeeeEEEchh--hcc---cCCCCccccC-----
Confidence            99999997665332222222     899999999999987765     899988763  221   1222221100     


Q ss_pred             cccccCCCcccccCCCCC-------CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC--CCeeEEE
Q 037144          341 KEQEVGYKDWQITLCRRF-------RSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP--RNFSLVC  411 (502)
Q Consensus       341 ~~~~~~~~~~~~~~sr~~-------~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~--~~~~~v~  411 (502)
                       .+.......+..|+++.       .++..|..++.+|.+|+++..++...+++|++++|.+..++...++  +.+.-+.
T Consensus       764 -~~~~~r~~~s~iGt~~~a~~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~~~~~~~~~~hEfv  842 (993)
T PLN02414        764 -GGIPRPEKTQPLGTISAAPWGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGHYPVLFRGKNGTCAHEFI  842 (993)
T ss_pred             -CCcccccCCCCcCCccchhhhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCeeeeEE
Confidence             00000000011133332       1246688888899999999999999999999999987434333322  2223333


Q ss_pred             EEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHH
Q 037144          412 FRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAA  491 (502)
Q Consensus       412 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~  491 (502)
                      +...+..  +           .   +       ......+.++|.+.|+...+ ..+.....+|++.+.. .+++|||++
T Consensus       843 ~~~~~l~--~-----------~---~-------g~~~~di~krL~d~Gihapt-~~~pv~~~lmiepTE~-~skeelDrf  897 (993)
T PLN02414        843 IDLRPFK--N-----------T---A-------GIEPEDVAKRLMDYGFHAPT-MSWPVPGTLMIEPTES-ESKAELDRF  897 (993)
T ss_pred             Eeccccc--c-----------c---c-------CCCHHHHHHHHHHcCcEEee-eccccCCEEEEEeeee-CCHHHHHHH
Confidence            3332110  0           0   0       00024567777777864333 2244567899998755 566799999


Q ss_pred             HHHHHHHHHh
Q 037144          492 WTVVQEHLEA  501 (502)
Q Consensus       492 ~~~l~~~~~~  501 (502)
                      +++|.++.++
T Consensus       898 ~~al~~i~~e  907 (993)
T PLN02414        898 CDALISIREE  907 (993)
T ss_pred             HHHHHHHHHH
Confidence            9999887654

>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase

Probab=99.94  E-value=9.3e-24  Score=214.40  Aligned_cols=311  Identities=14%  Similarity=0.114  Sum_probs=207.3

Q ss_pred             HHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCC
Q 037144          120 IVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDR  199 (502)
Q Consensus       120 ~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~  199 (502)
                      ++.+.+++++|.+.         ..+++||++++..++.+...           +++.|+++...|++...+++..|+  
T Consensus        55 ~~~e~lA~~~g~~~---------~~i~~g~~~a~~~~~~~l~~-----------~gd~Vl~~~~~h~s~~~~~~~~g~--  112 (370)
T TIGR02539        55 DFLEDLAEFLGMDE---------ARVTHGAREGKFAVMHALCK-----------EGDWVVLDGLAHYTSYVAAERAGL--  112 (370)
T ss_pred             HHHHHHHHHhCCCc---------eEEECChHHHHHHHHHHhhC-----------CCCEEEECCcccHHHHHHHHHcCC--
Confidence            45566899999874         46789999998776655532           677888999999999999999999  


Q ss_pred             CCEEEEecCCCCCcccCHHHHHHHHHHHHhc-CCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccccccccc
Q 037144          200 KNIRAIKTTKSSSYGLSAESVLSQINLDVEA-ELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACI  278 (502)
Q Consensus       200 ~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~-g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~  278 (502)
                       +++.+|.+.+.++.+|+++|+++|++.++. +..+.+|+++++++++|.+.|+++|+++|++||++++||+||+.+.+.
T Consensus       113 -~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livDea~~~g~~~  191 (370)
T TIGR02539       113 -NVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGRMP  191 (370)
T ss_pred             -EEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEECccccCCcC
Confidence             999999875446889999999999764322 124568888999999999999999999999999999999999876433


Q ss_pred             CccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCC-
Q 037144          279 CPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRR-  357 (502)
Q Consensus       279 ~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~-  357 (502)
                      .+. ..     .++|.++.++|||++.+.++|+++.++. ..........+|.....          .    .+..+.. 
T Consensus       192 ~~~-~~-----~~~di~v~s~sK~~~~~g~~G~l~~~~~-~i~~l~~~~~~~~~~~~----------~----~~~~~~~~  250 (370)
T TIGR02539       192 VSA-KE-----IGADFIVGSGHKSMAASGPCGVLGMSEE-WEDIVLRKSRYSPVKEV----------E----LLGCTSRG  250 (370)
T ss_pred             CCH-HH-----cCCCEEEeeCcccccCCCCEEEEEECHH-HHhhhcccccCCcccee----------e----eecccccc
Confidence            221 11     1589999999999987777888877543 32222122222211100          0    0111111 


Q ss_pred             CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe--cCCCeeEEEEEeecCcchhhhhhcccCCCcccc
Q 037144          358 FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA--FPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQY  435 (502)
Q Consensus       358 ~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~--~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~  435 (502)
                      ..+..++.++... .+.+ +...+..+++++|++.|+++ |++++  .++..+++.+..+....                
T Consensus       251 ~~~~~~~~al~~~-~~~l-~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~s~t~~v~~~~~~~~~----------------  311 (370)
T TIGR02539       251 APIVTMMASFPHV-VERV-KRWDEEVKKTRWFVAELEDI-GFIQLGQKPKEHDLVKFETPGFHE----------------  311 (370)
T ss_pred             cHHHHHHHHHHHH-HHHH-HHHHHHHHHHHHHHHHHHhC-CcEEEccCCCcCceEEEECCchhH----------------
Confidence            1223333434321 2223 23445566678999999998 79875  35667788776532100                


Q ss_pred             cccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHhC
Q 037144          436 RQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEAF  502 (502)
Q Consensus       436 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~~  502 (502)
                          .....+.....+.+.|.++|...+.+   ....++|++++ .+ +++|+++++++|+++.+++
T Consensus       312 ----~~~~~~~~~~~~~~~L~e~GI~~ir~---~~~~~iRis~~-~~-t~e~i~~l~~~L~~~~~~~  369 (370)
T TIGR02539       312 ----IAQKHKRRGYFLYEELKKRGIHGIRS---GQTKYFKLSVY-GL-TKEQVEYVVDSFEEIVEEY  369 (370)
T ss_pred             ----HhhhhccccHHHHHHHHhCCCccccC---CcceEEEEEec-CC-CHHHHHHHHHHHHHHHHhc
Confidence                00000112346778888888742222   22458999984 33 6679999999999987653

Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.

>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase

Probab=99.93  E-value=1e-23  Score=213.14  Aligned_cols=341  Identities=13%  Similarity=0.106  Sum_probs=221.2

Q ss_pred             CCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHH
Q 037144           83 FPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARD  162 (502)
Q Consensus        83 ~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~  162 (502)
                      .|++..++..+.+.+...++.    |  .+...++..++++.+++++|.++..     -..++++|||+++..++.....
T Consensus         4 ~p~p~~~~~~~~~~~~~~~~~----~--~~~~~~~~~~~~~~la~~~~~~~~~-----~~i~~~~~gt~~l~~~~~~~~~   72 (355)
T TIGR03301         4 TPGPLSTSATVRDAMLVDWCH----W--DSEFNDVTDQVRDRLLALAGGDDNH-----TCVLLQGSGTFAVEATIGSLVP   72 (355)
T ss_pred             cCCCCCCCHHHHHHhhhhccC----C--CHHHHHHHHHHHHHHHHHhcCCCCC-----cEEEEeCCcHHHHHHHHHhccC
Confidence            455555556666666553322    2  2334567778999999999997642     1467899999999777765532


Q ss_pred             HHHHHhCccCCCCeEEEeCCCCchh-HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEec
Q 037144          163 RVLKKIGRENISKLVVYSSDQTHCA-FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATV  241 (502)
Q Consensus       163 ~~~~~~~~~~~~~~~v~~s~~~H~s-~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~  241 (502)
                      .          ++.+++++...|.+ +..+++..|+   +++.++.++  ++.+|+++|++++++.+    ...+|+.++
T Consensus        73 ~----------~~~vi~~~~~~~~~~~~~~a~~~g~---~~~~i~~~~--~~~~d~~~l~~~l~~~~----~~~~v~~~~  133 (355)
T TIGR03301        73 R----------DGKLLVLINGAYGERLAKICEYLGI---PHTDLNFSE--YEPPDLNRIEEALAADP----DITHVATVH  133 (355)
T ss_pred             C----------CCeEEEECCCchhhHHHHHHHHcCC---ceEEEecCC--CCCCCHHHHHHHHHhCC----CceEEEEEe
Confidence            1          23345555444433 5677888999   999999874  35899999999997532    234677888


Q ss_pred             CCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhh
Q 037144          242 GTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLL  321 (502)
Q Consensus       242 gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~  321 (502)
                      .+|++|.+.|+++|+++|++||++++||++++.+....+ ...     -++|+++.++|||+++|.|+|+++++++. +.
T Consensus       134 ~~~~~G~~~~~~~i~~l~~~~~~~livD~~~s~g~~~~~-~~~-----~~~d~~~~s~~K~l~~~~G~g~~~~~~~~-~~  206 (355)
T TIGR03301       134 HETTTGILNPLEAIAKVARSHGAVLIVDAMSSFGAIPID-IEE-----LDVDALIASANKCLEGVPGFGFVIARRDL-LE  206 (355)
T ss_pred             cCCcccchhHHHHHHHHHHHcCCEEEEEeccccCCcccc-hhh-----cCccEEEecCCcccccCCceeEEEECHHH-HH
Confidence            999999999999999999999999999997765433321 111     16899999999999888889999887543 22


Q ss_pred             hhhcCCcccccCccCCCCCcccccCCCcccccCCCCC-----CchHHHHHHHHhcHHH-HHHHHHHHHHHHHHHHHHHhc
Q 037144          322 STLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRF-----RSLKLWVVIRNFGVAN-LRNFIRSHVGMAKLFERLVTS  395 (502)
Q Consensus       322 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~-----~al~~~~~l~~~g~~g-~~~~~~~~~~la~~l~~~l~~  395 (502)
                      .......++..+..       ..+...  .-....++     ...++..+++.+..+| +.+..++..++++++.+.|++
T Consensus       207 ~~~~~~~~~~~~~~-------~~~~~~--~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~  277 (355)
T TIGR03301       207 ASAGNARSLYLDLY-------DQWAYM--EKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRA  277 (355)
T ss_pred             HhhCCCCCceeeHH-------HHHHHh--hhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHH
Confidence            22111111111100       000000  00011111     1134455677665665 888899999999999999988


Q ss_pred             CCCeEEecCCC--ee-EEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEE
Q 037144          396 DKRFEVAFPRN--FS-LVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIY  472 (502)
Q Consensus       396 ~~~~~l~~~~~--~~-~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~  472 (502)
                      + +++++.++.  .+ +++|++++..                          .....++.+++.++|.++. +.......
T Consensus       278 ~-g~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~l~~~gi~i~-~~~~~~~~  329 (355)
T TIGR03301       278 L-GFQPLLPERWQSPIIVSFLYPDDP--------------------------DFDFDDFYQELKERGFVIY-PGKLTLAD  329 (355)
T ss_pred             c-CCeeecCCCCCCCcEEEEECCCCC--------------------------cchHHHHHHHHHHCCEEEE-CCcccccc
Confidence            7 788765432  23 3456554310                          0012466777777886543 33222236


Q ss_pred             EEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144          473 VLRFAAGNSMTMESHVRAAWTVVQEH  498 (502)
Q Consensus       473 ~lR~~~~~~~t~~~di~~~~~~l~~~  498 (502)
                      ++|+++..+ ++++|++++++.|+++
T Consensus       330 ~iRis~~~~-~~~~~i~~~~~~l~~~  354 (355)
T TIGR03301       330 TFRIGTIGE-IDAADIERLLEAIKDA  354 (355)
T ss_pred             EEEEecCCC-CCHHHHHHHHHHHHhh
Confidence            899997644 6677999999999875

This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.

>TIGR03235 DNA_S_dndA cysteine desulfurase DndA

Probab=99.93  E-value=6.9e-24  Score=214.32  Aligned_cols=288  Identities=11%  Similarity=0.056  Sum_probs=196.6

Q ss_pred             ccccCCCCCCHHHHHHHHHHhhcC---CCCc--ccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHH
Q 037144           79 YFAYFPATSSVAGIVGEMLSSGFN---VVGL--DWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEAL  153 (502)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~l~~~~n---~~~~--~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~  153 (502)
                      ||++...++.++.+ .+.+...+.   .+..  .+..+.....+.+++++++++++|.+.+       .+++|+|+|+++
T Consensus         1 yld~a~~~~~~~~v-~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-------~v~~~~g~t~a~   72 (353)
T TIGR03235         1 YLDHNATTPIDPAV-AEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALGADTE-------EVIFTSGATESN   72 (353)
T ss_pred             CCCCCCCCCCCHHH-HHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCC-------eEEEeCCHHHHH
Confidence            45555555544444 444443331   1111  1222334556777899999999999754       589999999998


Q ss_pred             HHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHH---HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhc
Q 037144          154 LCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAA---QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEA  230 (502)
Q Consensus       154 ~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa---~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~  230 (502)
                      ..++.+......      ..++.+|+++...|+++....   +..|+   +++.||+++  ++.+|+++|+++++++   
T Consensus        73 ~~~l~~l~~~~~------~~g~~~vi~~~~~~~s~~~~~~~~~~~G~---~v~~v~~~~--~~~~d~~~l~~~l~~~---  138 (353)
T TIGR03235        73 NLAILGLARAGE------QKGKKHIITSAIEHPAVLEPIRALERNGF---TVTYLPVDE--SGRIDVDELADAIRPD---  138 (353)
T ss_pred             HHHHHHHHHhcc------cCCCCeeeEcccccHHHHHHHHHHHhcCC---EEEEEccCC--CCcCCHHHHHHhCCCC---
Confidence            877766543200      002368889999999876553   44687   999999875  4689999999988643   


Q ss_pred             CCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcce
Q 037144          231 ELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCC  310 (502)
Q Consensus       231 g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g  310 (502)
                         +.+|++++++|++|.+.|+++|+++|+++|+|+|||++++.+..+.+...      .++|++++++|||+ +|.|+|
T Consensus       139 ---~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~~ivD~a~~~g~~~~~~~~------~~~D~~~~s~~K~~-gp~g~g  208 (353)
T TIGR03235       139 ---TLLVSIMHVNNETGSIQPIREIAEVLEAHEAFFHVDAAQVVGKITVDLSA------DRIDLISCSGHKIY-GPKGIG  208 (353)
T ss_pred             ---CEEEEEEcccCCceeccCHHHHHHHHHHcCCEEEEEchhhcCCccccccc------cCCCEEEeehhhcC-CCCceE
Confidence               34888999999999999999999999999999999999988776654221      27999999999985 688999


Q ss_pred             EEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccC-CCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHH
Q 037144          311 CLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITL-CRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKL  388 (502)
Q Consensus       311 ~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~-sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~  388 (502)
                      +++++++....  ....+.+..... .            ..++. +.. ...+++..+++.+ .++.+++.+++.+++++
T Consensus       209 ~l~~~~~~~~~--~~~~~~~~~~~~-~------------~~~~~gt~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~  272 (353)
T TIGR03235       209 ALVIRKRGKPK--APLKPIMFGGGQ-E------------RGLRPGTLPVHLIVGMGEAAEIA-RRNAQAWEVKLRAMRNQ  272 (353)
T ss_pred             EEEEccCcccc--cccCceeeCCCC-c------------CccccCCCChHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHH
Confidence            99998763211  111221111100 0            01111 111 1224555666654 46788899999999999


Q ss_pred             HHHHHhcCCCeEEecCCC---eeEEEEEee
Q 037144          389 FERLVTSDKRFEVAFPRN---FSLVCFRVT  415 (502)
Q Consensus       389 l~~~l~~~~~~~l~~~~~---~~~v~f~~~  415 (502)
                      +++.|++ +|++++.++.   ..+++|.+.
T Consensus       273 l~~~l~~-~g~~~~~~~~~~~~~i~~~~~~  301 (353)
T TIGR03235       273 LRDALQT-LGVKLNGDPAETIPHILNFSID  301 (353)
T ss_pred             HHHHhcc-CCeEEeCCcccccCCEEEEEeC
Confidence            9999988 6999986432   346777654

This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.

>PRK12566 glycine dehydrogenase; Provisional

Probab=99.93  E-value=2.5e-23  Score=223.57  Aligned_cols=388  Identities=11%  Similarity=0.042  Sum_probs=248.0

Q ss_pred             CCCCHHHHHHHHHHhhcCCCCCCCCCccccc-----CCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHH
Q 037144           52 SPESVETILQDVQEHIVPGITHWQSPNYFAY-----FPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLG  126 (502)
Q Consensus        52 ~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~-----~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~  126 (502)
                      .+.|..++++.+.++-..+..-..+..|+|-     .+.....|.-..++.+.  .+.. ..+.+.+.-++-.+..+|++
T Consensus       477 ~~~SE~el~r~~~~La~kn~~~~~~~~~LGsCTmK~n~~~~~~p~s~~eF~t~--hPyq-p~e~sQG~lq~i~elq~~l~  553 (954)
T PRK12566        477 AHHSETEMLRYLKQLENKDLALNQSMIPLGSCTMKLNATSEMIPITWPEFAQL--HPFA-PREQAEGYRAMIDELEAWLC  553 (954)
T ss_pred             cCCCHHHHHHHHHHHHhcCcCcccCcccCcccccCcCcHHhhhcccchhhhcC--CCCC-chhhhcCHHHHHHHHHHHHH
Confidence            4579999999999987666554444556664     22222233333344433  2221 11335555666666779999


Q ss_pred             HhcCCCCccCcCCCCcEEEcC-CchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEE
Q 037144          127 QMLDLPKSFLFSGNGGGVIQG-TTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAI  205 (502)
Q Consensus       127 ~l~g~~~~~~~~~~~~g~~t~-ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v  205 (502)
                      +++|++..         .+.+ +|+++++.++++.|.....+ |..  .+.+|+++...|.+....+...|+   +++.|
T Consensus       554 eLtGmd~~---------Sl~p~sGA~gE~A~Lmair~yh~~~-Ge~--~r~~vLIp~saHgtNpasa~~~Gi---eVv~V  618 (954)
T PRK12566        554 AITGFDAI---------CMQPNSGAQGEYAGLLAIRRYHRSR-GQS--QRDICLIPSSAHGTNPASAQMAGM---RVVIV  618 (954)
T ss_pred             HHHCCCeE---------eecCCchHHHHHHHHHHHHHHHHhc-CCC--CCCEEEecccccccCHHHHHHCCC---EEEEe
Confidence            99999852         4444 78888988888876543322 221  467889999999877777888999   99999


Q ss_pred             ecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhh
Q 037144          206 KTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF  285 (502)
Q Consensus       206 ~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~  285 (502)
                      |+|+  +|.+|+++|++++++..   ....+|+++.+++..+..+|+++|+++|+++|++++||||+.......+.....
T Consensus       619 p~D~--~G~iDle~L~a~I~~~~---~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~~l~~Pg~~  693 (954)
T PRK12566        619 ECDP--DGNVDLDDLKAKAAAAG---DRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQVGLARPADI  693 (954)
T ss_pred             ccCC--CCCcCHHHHHHHhhccC---CCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhccCCCChhhc
Confidence            9985  56999999999997321   124578888998888777899999999999999999999997554444332332


Q ss_pred             hcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCcc-CCCCCcccccCCCcccccCCCCC-CchHH
Q 037144          286 IDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEA-TDQEPKEQEVGYKDWQITLCRRF-RSLKL  363 (502)
Q Consensus       286 ~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~-~~~~~~~~~~~~~~~~~~~sr~~-~al~~  363 (502)
                           ++|++++++||||+.|.+.|+.++..-....    .-.+|+.+.. .+.  .+.....+.....+.-.+ -++..
T Consensus       694 -----GADi~~~s~HKtf~~P~G~GGP~vG~iav~~----~L~pfLp~~P~~d~--~G~~~r~ga~S~~~~gsa~~l~~A  762 (954)
T PRK12566        694 -----GADVSHMNLHKTFCIPHGGGGPGMGPIGVRA----HLAPFVANHPVVPV--EGPDPNNGAVSAAPWGSASILPIS  762 (954)
T ss_pred             -----CCCEEEecCCcccCcCccCCCCccchhhhhh----hhhhhccCCCCcCC--CCCCCCCCceeecccchHHHHHHH
Confidence                 8999999999999999999998876521111    0112332211 000  000000000000011010 13567


Q ss_pred             HHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC---C-eeEEEEEeecCcchhhhhhcccCCCcccccccc
Q 037144          364 WVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR---N-FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFS  439 (502)
Q Consensus       364 ~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~---~-~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  439 (502)
                      |.-++.+|.+ +.+.......+++|++++|.+.  +++...+   . +.-+.+...+..  +                  
T Consensus       763 ~~Yi~~lG~e-Lk~aa~~ailnAnYla~rL~~~--~~v~~~~~~~~~~hEfii~~~~l~--~------------------  819 (954)
T PRK12566        763 WMYIAMMGPQ-LADASEVAILSANYLANQLGGA--FPVLYRGRNERVAHECILDLRPLK--A------------------  819 (954)
T ss_pred             HHHHHHHCHH-HHHHHHHHHHHHHHHHHHhHhh--CCCCcCCCCCCeeeEEEEEccccc--c------------------
Confidence            7788889998 8888888899999999999874  4443322   1 222333332110  0                  


Q ss_pred             hhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          440 EEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       440 ~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                       ..  ......+.++|.+.|+.... ..+.....+|++.+.. ++++|||+++++|+++.++
T Consensus       820 -~~--g~~~~dvakRL~d~Gihapt-~~fPv~~~LmIepTE~-eskeEIDrf~eAL~~I~~e  876 (954)
T PRK12566        820 -QT--GISEEDVAKRLMDYGFHAPT-MSFPVPGTLMVEPTES-ESKAELDRFVEAMLSIRAE  876 (954)
T ss_pred             -cc--CCCHHHHHHHHHHCCcEEeE-EeeccCCEEEEEeeee-CCHHHHHHHHHHHHHHHHH
Confidence             00  00023466677766864332 2344567899998755 5667999999999988764

>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

Probab=99.93  E-value=5.2e-23  Score=208.70  Aligned_cols=344  Identities=13%  Similarity=0.113  Sum_probs=245.6

Q ss_pred             ccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHH
Q 037144           79 YFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLT  158 (502)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~  158 (502)
                      .++.-.+...+|..+.+.+...++.....|..+.+..++.+.+.+++.+.+|++...    ..+.++|+|+++|++.++.
T Consensus        32 ~l~iG~Pd~~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~~~~----~~eiivt~Ga~~al~~~~~  107 (393)
T COG0436          32 DLSIGEPDFPTPEHIIEAAIEALEEGGTHYTPSAGIPELREAIAEKYKRRYGLDVDP----EEEIIVTAGAKEALFLAFL  107 (393)
T ss_pred             EeCCCCCCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCeEEEeCCHHHHHHHHHH
Confidence            344444455667777777777665543256677889999999999999999853221    1259999999999999988


Q ss_pred             HHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCC-CCcccCHHHHHHHHHHHHhcCCccEEE
Q 037144          159 AARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKS-SSYGLSAESVLSQINLDVEAELIPLFL  237 (502)
Q Consensus       159 ~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~-~~~~~d~~~Le~~i~~~~~~g~~p~~V  237 (502)
                      +..+           +++.|+++++.+.++.....++|.   +++.+|++.. .+|.+|+++|+++++++++      +|
T Consensus       108 a~~~-----------pGDeVlip~P~Y~~y~~~~~~~gg---~~v~v~l~~~~~~f~~d~~~l~~~i~~ktk------~i  167 (393)
T COG0436         108 ALLN-----------PGDEVLIPDPGYPSYEAAVKLAGG---KPVPVPLDEEENGFKPDLEDLEAAITPKTK------AI  167 (393)
T ss_pred             HhcC-----------CCCEEEEeCCCCcCHHHHHHhcCC---EEEEEeCCcCccCCcCCHHHHHhhcCccce------EE
Confidence            8776           788899999999999999999999   9999998654 3799999999999998665      89


Q ss_pred             EEecCCcccccc---CChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCC-CC-eeEE-ccCCcCC-CCCcce
Q 037144          238 CATVGTTAITAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEC-VD-SFSF-NPHKWLF-TTLDCC  310 (502)
Q Consensus       238 v~t~gtt~~G~i---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~-aD-si~~-~~hK~l~-~p~~~g  310 (502)
                      +++.|+|+||++   +.+++|+++|++||+|++.|.+|....+....+...+. +.. .| .|++ +++|.++ +.+.+|
T Consensus       168 ~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~-~~~~~~~~i~i~s~SK~~~mtGwRvG  246 (393)
T COG0436         168 ILNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILE-LAGARDRTITINSFSKTYGMTGWRIG  246 (393)
T ss_pred             EEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhh-cCCCcceEEEEeccccccccccccee
Confidence            999999999999   55889999999999999999999887654321222221 112 12 5555 5999997 557788


Q ss_pred             EEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc----HHHHHHHHHHHHHHH
Q 037144          311 CLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG----VANLRNFIRSHVGMA  386 (502)
Q Consensus       311 ~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g----~~g~~~~~~~~~~la  386 (502)
                      +++..++... +.+.....|+..                    |.   ..+...++..++.    .+..+.+.+.+.+++
T Consensus       247 ~~v~~~~~l~-~~~~~~~~~~~~--------------------~~---~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rr  302 (393)
T COG0436         247 WVVGPPEELI-AALRKLKSYLTS--------------------CA---PTPAQYAAIAALNGPQSDEVVEEMREEYRERR  302 (393)
T ss_pred             EeecChHHHH-HHHHHHHHhccc--------------------CC---CHHHHHHHHHHhcCccchHHHHHHHHHHHHHH
Confidence            8877644333 222211122211                    11   2233344444442    246677778899999


Q ss_pred             HHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEee
Q 037144          387 KLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHA  466 (502)
Q Consensus       387 ~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~  466 (502)
                      +.+.+.|.+++|+++..+|...+..|.-.+...                           ...+++++|.++..+.+.|+
T Consensus       303 d~l~~~l~~~~g~~~~~~p~Ga~Y~~~~i~~~~---------------------------d~~~f~~~Ll~~~gV~v~PG  355 (393)
T COG0436         303 DLLVEALNEIGGLSVVKPPEGAFYLFPKIPELL---------------------------DSEEFAKKLLEEAGVAVVPG  355 (393)
T ss_pred             HHHHHHHHhcCCeeeccCCCeeEEEEeecCCCC---------------------------CHHHHHHHHHHhCCEEEecc
Confidence            999999999989999876877777776554310                           02355666665554444444


Q ss_pred             -eEC---CEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          467 -IVG---GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       467 -~~~---g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                       .++   |.+++|+|++.   ++++++++++.+.+..+.
T Consensus       356 ~~Fg~~~g~~~vRis~~~---~~~~l~~a~~rl~~~~~~  391 (393)
T COG0436         356 SGFGEPPGEGYVRLSLAT---SEETLEEALRRLARFLAE  391 (393)
T ss_pred             cccCCCCCCCeEEEEEec---CHHHHHHHHHHHHHHHHh
Confidence             443   45799999874   447999999999887664

>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional

Probab=99.93  E-value=2.5e-23  Score=211.49  Aligned_cols=348  Identities=13%  Similarity=0.089  Sum_probs=223.8

Q ss_pred             cCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHH
Q 037144           82 YFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAAR  161 (502)
Q Consensus        82 ~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~  161 (502)
                      +.|++..++..+.+.+...+    ..|  ++.+.+...++++.+++++|.+++.     ...+++++||+++..++....
T Consensus         9 ~~pgP~~~~~~~~~a~~~~~----~~~--~~~~~~~~~~~~~~l~~l~~~~~~~-----~~i~~~~~gt~~l~~~~~~l~   77 (368)
T PRK13479          9 LTPGPLTTSRTVREAMLRDW----GSW--DDDFNALTASVRAKLVAIATGEEGY-----TCVPLQGSGTFSVEAAIGSLV   77 (368)
T ss_pred             ecCCCCCCCHHHHHHhCCCC----CCC--ChHHHHHHHHHHHHHHHHhCCCCCc-----eEEEEcCCcHHHHHHHHHhcc
Confidence            44555444444444443322    222  3445567788999999999986431     146789999999877766553


Q ss_pred             HHHHHHhCccCCCCeEEEeCCCCchhH--HHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEE
Q 037144          162 DRVLKKIGRENISKLVVYSSDQTHCAF--QKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCA  239 (502)
Q Consensus       162 ~~~~~~~~~~~~~~~~v~~s~~~H~s~--~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~  239 (502)
                      .           +++.+++....++..  .+.++..|+   +++.||.++  ++.+|++++++++++..+    ..+|.+
T Consensus        78 ~-----------~~~~vlv~~~~~~~~~~~~~~~~~g~---~~~~i~~~~--~~~~d~~~l~~~l~~~~~----~~~v~~  137 (368)
T PRK13479         78 P-----------RDGKVLVPDNGAYGARIAQIAEYLGI---AHVVLDTGE--DEPPDAAEVEAALAADPR----ITHVAL  137 (368)
T ss_pred             C-----------CCCeEEEEeCCchHHHHHHHHHHcCC---cEEEEECCC--CCCCCHHHHHHHHHhCCC----CcEEEE
Confidence            2           344455544555543  578888999   999999975  358999999999875421    236888


Q ss_pred             ecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchh
Q 037144          240 TVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSC  319 (502)
Q Consensus       240 t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~  319 (502)
                      ++++|++|.+.|+++|+++|+++|++++||++++.+..+.+ ...     .++|.+++++|||+++|.|.|+++++++. 
T Consensus       138 ~~~~~~tG~~~~~~~i~~l~~~~~~~livDa~~~~g~~~~~-~~~-----~~~d~~v~s~~K~l~g~~G~G~l~~~~~~-  210 (368)
T PRK13479        138 VHCETTTGILNPLDEIAAVAKRHGKRLIVDAMSSFGAIPID-IAE-----LGIDALISSANKCIEGVPGFGFVIARRSE-  210 (368)
T ss_pred             EcccCccccccCHHHHHHHHHHcCCEEEEEcccccCCcccc-ccc-----cCceEEEecCccccccCCCceEEEECHHH-
Confidence            99999999999999999999999999999987755443322 111     16899999999999999999999987543 


Q ss_pred             hhhhhcCCcccccCccCCCCCcccccCCCcccccCCCC-CCchHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHhcCC
Q 037144          320 LLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRR-FRSLKLWVVIRNFGVA-NLRNFIRSHVGMAKLFERLVTSDK  397 (502)
Q Consensus       320 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~g~~-g~~~~~~~~~~la~~l~~~l~~~~  397 (502)
                      +........+|..+....   .........+.+  +.. .....+..+++.+..+ ++.++++++.++++++++.|+++ 
T Consensus       211 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~--t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-  284 (368)
T PRK13479        211 LEACKGNSRSLSLDLYDQ---WAYMEKTGQWRF--TPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRAL-  284 (368)
T ss_pred             HHHhhcCCCCeeecHHHH---HhhhcccCCCCC--CCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-
Confidence            222211112221110000   000000000000  111 1223556677666444 47888899999999999999998 


Q ss_pred             CeEEecCC--Cee-EEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEE
Q 037144          398 RFEVAFPR--NFS-LVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVL  474 (502)
Q Consensus       398 ~~~l~~~~--~~~-~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~l  474 (502)
                      |++++.++  ..+ +++|......                          .....++.++|.++|.++. +.......++
T Consensus       285 g~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~l~~~L~~~gi~v~-~g~~~~~~~i  337 (368)
T PRK13479        285 GFEPLLDAEIQSPIIVTFHAPADP--------------------------AYDFKEFYERLKEQGFVIY-PGKLTQVDTF  337 (368)
T ss_pred             CCcccCCchhcCceEEEEECCCCC--------------------------CcCHHHHHHHHHHCCEEEe-cCCCCCCCEE
Confidence            78876443  222 4566543211                          0012467778888887543 3222224579


Q ss_pred             EEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          475 RFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       475 R~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      |++++.+ ++++|+++++++|+++.++
T Consensus       338 Ris~~~~-~t~edi~~~l~~L~~~l~~  363 (368)
T PRK13479        338 RIGCIGD-VDAADIRRLVAAIAEALYW  363 (368)
T ss_pred             EEecCCC-CCHHHHHHHHHHHHHHHHH
Confidence            9987544 5677999999999988765

>PLN02724 Molybdenum cofactor sulfurase

Probab=99.92  E-value=6.2e-23  Score=226.36  Aligned_cols=326  Identities=11%  Similarity=-0.015  Sum_probs=209.8

Q ss_pred             HHHHHHhhcCCCCCCCCCcccccCCCCCCHHHHHHHHHHhhc-----CCCCcccccChhhHHHHHHHHHHHHHhcCCCCc
Q 037144           60 LQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGF-----NVVGLDWISSPAAVELENIVMDWLGQMLDLPKS  134 (502)
Q Consensus        60 l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~-----n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~  134 (502)
                      ++.++..-+|....   -.||++..+++.++..+.+++..++     |+. ..+..+..++++-.++++.+++++|.+..
T Consensus        21 ~~~~R~~~fp~l~~---~iYLD~Aatt~~~~~~V~~~~~~~~~~~~~np~-s~~~~s~~~~~~~e~aR~~ia~~lga~~~   96 (805)
T PLN02724         21 IDELRATEFARLKG---VVYLDHAGATLYSESQLEAALADFSSNVYGNPH-SQSDSSMRSSDTIESARQQVLEYFNAPPS   96 (805)
T ss_pred             HHHHHHHHhhhcCC---CEeEeCCCCCCCCHHHHHHHHHHHHhhccCCCC-cCcchhhhHHHHHHHHHHHHHHHhCCCcc
Confidence            44555333444322   3688888777666666766655443     222 23344555677777899999999999653


Q ss_pred             cCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH---HHHHHcCCCCCCEEEEecCCC-
Q 037144          135 FLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ---KAAQIVGIDRKNIRAIKTTKS-  210 (502)
Q Consensus       135 ~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~---~aa~~~Glg~~~v~~v~~~~~-  210 (502)
                      .     -.++||+|+|+|+.........          .+++.|+++...|.|+.   +.++..|+   +++.+|++.. 
T Consensus        97 ~-----~~VvFtsnaT~alnlva~~l~~----------~~gd~Iv~t~~eH~svl~~~~~a~~~G~---~v~~v~~~~~~  158 (805)
T PLN02724         97 D-----YACVFTSGATAALKLVGETFPW----------SSESHFCYTLENHNSVLGIREYALEKGA---AAIAVDIEEAA  158 (805)
T ss_pred             c-----eEEEEeCChHHHHHHHHHHCCC----------CCCCeEEEeeccccchHHHHHHHHHcCC---eEEeccchhcc
Confidence            1     0479999999997654332210          14667888888997754   34445688   9999988621 


Q ss_pred             -----CCcccCH--HHHHHHHHHHH----hcCCccEEEEEecCCccccccCChhHHHHHHHHh-------C-CEEEeecc
Q 037144          211 -----SSYGLSA--ESVLSQINLDV----EAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF-------G-IWVHVDAA  271 (502)
Q Consensus       211 -----~~~~~d~--~~Le~~i~~~~----~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~-------g-~~lhVDaA  271 (502)
                           +.+.+++  ++|++.+++..    ..+..+.+|++++.+|.+|.+.||++|..+++..       | ++++||||
T Consensus       159 ~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaa  238 (805)
T PLN02724        159 NQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAA  238 (805)
T ss_pred             ccccccccccccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehh
Confidence                 1234444  66776643111    1112335899999999999999999876655532       3 57999999


Q ss_pred             cccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCC-Cccc---ccCC
Q 037144          272 YAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQE-PKEQ---EVGY  347 (502)
Q Consensus       272 ~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~-~~~~---~~~~  347 (502)
                      ++.+..+.+-.+ +     ++|++++++|||++.|.|+|++++|+... . .+  .+.|......... ....   ....
T Consensus       239 Q~~g~~piDv~~-~-----~~Dfl~~S~HK~~GgP~G~G~L~vr~~~~-~-~l--~p~~~GGg~~~~~~~~~~~~~~~~~  308 (805)
T PLN02724        239 KGCGTSPPDLSR-Y-----PADFVVVSFYKIFGYPTGLGALLVRRDAA-K-LL--KKKYFGGGTVAASIADIDFVKRRER  308 (805)
T ss_pred             hhcCCCCCChhh-c-----CCCEEEEecceeccCCCCceEEEEehhhh-h-hh--cCCccCCCceEEEecccceeecccc
Confidence            999988775322 2     79999999999999999999999986532 1 11  2333322110000 0000   0000


Q ss_pred             CcccccCCCC--CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC------CeEEecCC--------CeeEEE
Q 037144          348 KDWQITLCRR--FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK------RFEVAFPR--------NFSLVC  411 (502)
Q Consensus       348 ~~~~~~~sr~--~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~------~~~l~~~~--------~~~~v~  411 (502)
                      ....++.+..  ...+++..+++.+-..|++++.++...|++++.+.|++++      +++++++.        +.++|+
T Consensus       309 ~~~rfE~GT~n~~~i~~l~aal~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivs  388 (805)
T PLN02724        309 VEQRFEDGTISFLSIAALRHGFKLLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVT  388 (805)
T ss_pred             HHHHhcCCCcchhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEE
Confidence            1112333322  2335667788877666888899999999999999999886      58887643        467999


Q ss_pred             EEeecC
Q 037144          412 FRVTPS  417 (502)
Q Consensus       412 f~~~~~  417 (502)
                      |.+...
T Consensus       389 Fnv~~~  394 (805)
T PLN02724        389 FNLKRA  394 (805)
T ss_pred             EEEEcC
Confidence            998753

>PTZ00094 serine hydroxymethyltransferase; Provisional

Probab=99.92  E-value=4.3e-23  Score=214.43  Aligned_cols=310  Identities=10%  Similarity=0.057  Sum_probs=201.1

Q ss_pred             cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEc---CCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCch
Q 037144          110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQ---GTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHC  186 (502)
Q Consensus       110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t---~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~  186 (502)
                      .......+|..+++.++++||.+.+       ..+++   +||+++|+.++.+...           +++.|+++...|.
T Consensus        74 g~~~~~~iE~~ar~~~a~lf~a~~~-------~~~~~~~~~sgt~an~~v~~al~~-----------~gd~Ii~~~~ehg  135 (452)
T PTZ00094         74 GNEVVDKIENLCQKRALEAFGLDPE-------EWGVNVQPYSGSPANFAVYTALLQ-----------PHDRIMGLDLPSG  135 (452)
T ss_pred             cchHHHHHHHHHHHHHHHHhCCCcc-------cceeecCCCchHHHHHHHHHHhcC-----------CCCEEEecccccC
Confidence            3344577887789999999999653       22344   7899999887766532           5778889988997


Q ss_pred             hHHHHHHH--------cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHH
Q 037144          187 AFQKAAQI--------VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDV  258 (502)
Q Consensus       187 s~~~aa~~--------~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i  258 (502)
                      +....+..        .|.+. .+..++++.  +|.+|+++|++++++.+     |.+|+++  .+.+|.+.|+++|+++
T Consensus       136 ~~l~~~~~l~~~~~~~~~~~~-~~~~~~~~~--~g~id~~~L~~~l~~~~-----~~lvi~~--~s~~g~~~di~~I~~i  205 (452)
T PTZ00094        136 GHLTHGFYTAKKKVSATSIYF-ESLPYQVNE--KGLIDYDKLEELAKAFR-----PKLIIAG--ASAYPRDIDYKRFREI  205 (452)
T ss_pred             Ccccccccccccccccceeee-eeeecccCC--CCCcCHHHHHHHHHHhC-----CCEEEEe--CCCCCCccCHHHHHHH
Confidence            75443211        11100 344555664  47999999999997532     2245443  4469999999999999


Q ss_pred             HHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCC
Q 037144          259 AKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQ  338 (502)
Q Consensus       259 ~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~  338 (502)
                      |+++|+++|||+||+.+.+..+....   .+.++|++++++|||+++|.| |++++++.. ...........+..     
T Consensus       206 ~~~~ga~l~vDaaq~~G~i~~~~~~~---~~~~~D~l~~S~hK~l~GP~G-g~l~~~~~~-~~~l~~~~~~~~~p-----  275 (452)
T PTZ00094        206 CDSVGAYLMADIAHTSGLVAAGVLPS---PFPYADVVTTTTHKSLRGPRS-GLIFYRKKV-KPDIENKINEAVFP-----  275 (452)
T ss_pred             HHHcCCEEEEeccchhccccCCCCCC---CCCCCcEEEcCCccCCCCCCc-eEEEEeccc-chHHHHhhccccCC-----
Confidence            99999999999999998876542221   123799999999999999997 777776542 11100000000100     


Q ss_pred             CCcccccCCCcccccCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC---CeeEEEEEe
Q 037144          339 EPKEQEVGYKDWQITLCRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR---NFSLVCFRV  414 (502)
Q Consensus       339 ~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~---~~~~v~f~~  414 (502)
                                  .++++-. ....++..+++.+...+++++.++..+++++|.+.|.+. |+++..+.   ...++.|..
T Consensus       276 ------------~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~-g~~v~~~~~~~~~~~v~~~~  342 (452)
T PTZ00094        276 ------------GLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKR-GYDLVTGGTDNHLVLVDLRP  342 (452)
T ss_pred             ------------CCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhC-CcEEecCCCCCceEeecCCc
Confidence                        0111111 133456667777656677888899999999999999886 89887532   223333332


Q ss_pred             ecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC-----CEEEEEEEecCCCCc----H
Q 037144          415 TPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG-----GIYVLRFAAGNSMTM----E  485 (502)
Q Consensus       415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-----g~~~lR~~~~~~~t~----~  485 (502)
                      .+..                             ...+...|.+.|+.+-..+...     ....+|+++.. .|+    +
T Consensus       343 ~~~~-----------------------------~~~~~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~~-~tt~g~~~  392 (452)
T PTZ00094        343 FGIT-----------------------------GSKMEKLLDAVNISVNKNTIPGDKSALNPSGVRLGTPA-LTTRGAKE  392 (452)
T ss_pred             CCCC-----------------------------HHHHHHHHHHCCcEEecccCCCCCcCCCCCeEEECCHH-HHhCCCCH
Confidence            2211                             2344555555576432221111     23689999854 454    8


Q ss_pred             HHHHHHHHHHHHHHH
Q 037144          486 SHVRAAWTVVQEHLE  500 (502)
Q Consensus       486 ~di~~~~~~l~~~~~  500 (502)
                      +||+++++.|.++++
T Consensus       393 ~di~~l~~~l~~~~~  407 (452)
T PTZ00094        393 KDFKFVADFLDRAVK  407 (452)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            899999999998775

>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]

Probab=99.92  E-value=9e-23  Score=202.82  Aligned_cols=339  Identities=15%  Similarity=0.120  Sum_probs=232.5

Q ss_pred             CCCCCCCCCcccccCCCCCCHHHHHHHHHHhh-cCCCC--cccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEE
Q 037144           69 PGITHWQSPNYFAYFPATSSVAGIVGEMLSSG-FNVVG--LDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVI  145 (502)
Q Consensus        69 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~-~n~~~--~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~  145 (502)
                      +...+|.+-.|+|.-..+. ....+.+.+..+ ....+  ......+...++|    +.|++++|.+.         .++
T Consensus        39 ~~~~nf~SNdYLGLa~~~~-~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE----~~lA~f~g~e~---------al~  104 (388)
T COG0156          39 RKVLNFCSNDYLGLASHPE-LIEAAKAAIRRYGVGAGGSRLISGTSDLHVELE----EELADFLGAEA---------ALL  104 (388)
T ss_pred             ceeEeeeccCcccccCCHH-HHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHH----HHHHHHhCCCc---------EEE
Confidence            3446677888999854322 222222223221 11111  1122333444455    55788888875         466


Q ss_pred             cCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHH
Q 037144          146 QGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQIN  225 (502)
Q Consensus       146 t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~  225 (502)
                      .++|-.||+..+.+...           ++++|+..+..|.|+.+++++.+.   +++..+.       .|+++||+.|+
T Consensus       105 f~SGy~AN~~~i~~l~~-----------~~dli~~D~lnHASiidG~rls~a---~~~~f~H-------nD~~~Le~~l~  163 (388)
T COG0156         105 FSSGFVANLGLLSALLK-----------KGDLIFSDELNHASIIDGIRLSRA---EVRRFKH-------NDLDHLEALLE  163 (388)
T ss_pred             EcccchhHHHHHHHhcC-----------CCcEEEEechhhhhHHHHHHhCCC---cEEEecC-------CCHHHHHHHHH
Confidence            66778889766655543           688999999999999999999998   9998875       48899999999


Q ss_pred             HHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhc--CC--CCCCeeEEccCC
Q 037144          226 LDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFID--GV--ECVDSFSFNPHK  301 (502)
Q Consensus       226 ~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~--~~--~~aDsi~~~~hK  301 (502)
                      +....+.++.+|+.....++.|.+.||++|.++|++|++|+.||.||+.+.+- +..+....  |+  ...|+++.++.|
T Consensus       164 ~~~~~~~~~~~IvtegVfSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv~G-~~GrG~~e~~g~~~~~vdi~~gTlsK  242 (388)
T COG0156         164 EARENGARRKLIVTEGVFSMDGDIAPLPELVELAEKYGALLYVDEAHAVGVLG-PNGRGLAEHFGLEPEEVDIIVGTLGK  242 (388)
T ss_pred             hhhccCCCceEEEEeccccCCCCcCCHHHHHHHHHHhCcEEEEEccccccccC-CCCccHHHHhCCCCccceEEEEEchh
Confidence            86543335678888899999999999999999999999999999999887763 33333322  33  345899999999


Q ss_pred             cCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHH
Q 037144          302 WLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRS  381 (502)
Q Consensus       302 ~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~  381 (502)
                      .|+   ..|.++.-+............+|+++....                   +..+.++..+++.+  +...++.++
T Consensus       243 AlG---s~Gg~v~g~~~~~d~L~~~ar~~ifStalp-------------------P~~aaa~~~al~~l--~~~~~~r~~  298 (388)
T COG0156         243 ALG---SSGGYIAGSAALIDYLRNRARPFIFSTALP-------------------PAVAAAALAALRIL--EEGPERRER  298 (388)
T ss_pred             hhc---ccCceeeCcHHHHHHHHHhCCceeccCCCC-------------------HHHHHHHHHHHHHH--HhCHHHHHH
Confidence            997   355555555544332334456777764321                   12333445566654  344677888


Q ss_pred             HHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcE
Q 037144          382 HVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKV  461 (502)
Q Consensus       382 ~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~  461 (502)
                      ..++..++++.+... ++.+. +..++++.+.+.+                            +....++.+.+.++|+.
T Consensus       299 L~~~~~~~~~~~~~~-~~~~~-~s~s~I~pv~~gd----------------------------~~~a~~~s~~l~~~Gi~  348 (388)
T COG0156         299 LQELAAFFRSLLKAL-GLVLL-PSESPIIPVILGD----------------------------EERALEASRALLEEGIY  348 (388)
T ss_pred             HHHHHHHHHHHHHhc-CCccC-CCCCCeeeeEeCC----------------------------HHHHHHHHHHHHHCCee
Confidence            899999999777665 66653 5667788777754                            23356677777778763


Q ss_pred             ---EEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144          462 ---FMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEH  498 (502)
Q Consensus       462 ---~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~  498 (502)
                         +..|++..|...||++++..+ +++||+++++++.++
T Consensus       349 v~~i~~PTVp~gtarlRi~lta~h-t~~~I~~l~~~l~~~  387 (388)
T COG0156         349 VSAIRPPTVPKGTARLRITLTAAH-TEEDIDRLAEALSEV  387 (388)
T ss_pred             EeeecCCCCCCCcceEEEEecCCC-CHHHHHHHHHHHHhh
Confidence               334566678889999998666 556999999999875

>PRK03080 phosphoserine aminotransferase; Provisional

Probab=99.91  E-value=7.8e-23  Score=207.86  Aligned_cols=340  Identities=11%  Similarity=-0.033  Sum_probs=214.9

Q ss_pred             ccCCCCCCHHHH-HHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEc-CCchHHHHHHHH
Q 037144           81 AYFPATSSVAGI-VGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQ-GTTCEALLCTLT  158 (502)
Q Consensus        81 ~~~~~~~~~~~~-~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t-~ggt~a~~~al~  158 (502)
                      .|.+++..++.. +.+.+...+-   .....++.+.++.+++++.+++++|.++..      ..+|+ +|||+++..++.
T Consensus        15 ~f~~Gp~~~~~~~v~~a~~~~~~---~~~hr~~~f~~~~~~~r~~l~~l~~~~~~~------~v~~~~gs~T~~~~~~~~   85 (378)
T PRK03080         15 RFSSGPCKKRPGWQLEALADALL---GRSHRQKPVKALLKRVIEGTRELLSLPEGY------EVGIVPGSDTGAWEMALW   85 (378)
T ss_pred             CcCCCCcCCChHHHHHHHHhhhc---ccCcCCHHHHHHHHHHHHHHHHHhCCCCCc------eEEEECCchHHHHHHHHH
Confidence            345555444433 5555543321   111234677888899999999999996542      46766 588888765554


Q ss_pred             HHHHHHHHHhCccCCCCeEEEeCCCCchhHHH--HHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEE
Q 037144          159 AARDRVLKKIGRENISKLVVYSSDQTHCAFQK--AAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLF  236 (502)
Q Consensus       159 ~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~--aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~  236 (502)
                      ....          .++..+++ ...|.+-+.  +++.+|+.  +++.++.+++  ...|+++++.     ++      .
T Consensus        86 ~l~~----------~~~~~vi~-~g~f~~~~~~~~~~~~g~~--~v~~~~~~~g--~~~d~~~i~~-----~~------~  139 (378)
T PRK03080         86 SLLG----------ARRVDHLA-WESFGSKWATDVVKQLKLE--DPRVLEADYG--SLPDLSAVDF-----DR------D  139 (378)
T ss_pred             hcCC----------CCcceEEE-eCHHHHHHHHHHHhhcCCC--CceEeccCCC--CCCCHhhcCC-----CC------C
Confidence            3311          02344444 346665333  33555652  6778887653  3778776432     21      5


Q ss_pred             EEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeC
Q 037144          237 LCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKD  316 (502)
Q Consensus       237 Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~  316 (502)
                      |++++.+|.+|.+.|+++|++  +++|++++||++++.+..+.+-.        .+|++++++|||+++|.|+|++++++
T Consensus       140 V~~~h~~t~tG~~~pi~~I~~--~~~g~~~vVDa~qs~G~~pidv~--------~iD~~~~s~~K~l~~P~G~g~l~v~~  209 (378)
T PRK03080        140 VVFTWNGTTTGVRVPVARWIG--ADREGLTICDATSAAFALPLDWS--------KLDVYTFSWQKVLGGEGGHGMAILSP  209 (378)
T ss_pred             EEEEecCCccceeccchhhcc--ccCCCeEEEecccccccCCCCHH--------HCcEEEEehhhhCCCCCceEEEEECH
Confidence            889999999999999999999  88999999999999998877632        47999999999999999999999986


Q ss_pred             chhhhhhhcCC-----cccccCccCCCCCcccccCCCcccccCCCCC--C---chHHHHHHHHhcHH-HHHHHHHHHHHH
Q 037144          317 PSCLLSTLSTN-----PQYLKNEATDQEPKEQEVGYKDWQITLCRRF--R---SLKLWVVIRNFGVA-NLRNFIRSHVGM  385 (502)
Q Consensus       317 ~~~l~~~~~~~-----~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~--~---al~~~~~l~~~g~~-g~~~~~~~~~~l  385 (502)
                      +.. ...-...     +.|+.-...        ........+.+...  .   ...+..+++.+-.+ |++++.+++.++
T Consensus       210 ~~~-~~~~p~~~~~~~~~~~~~~~~--------~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l  280 (378)
T PRK03080        210 RAV-ERLESYTPARPIPKFFRLTKG--------GKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAAN  280 (378)
T ss_pred             HHH-HhhhcccCCCCCchhheeccc--------hHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence            543 2111111     112110000        00000011111111  1   12345678877776 899999999999


Q ss_pred             HHHHHHHHhcCCCeEEecC-C--Ce-eEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcE
Q 037144          386 AKLFERLVTSDKRFEVAFP-R--NF-SLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKV  461 (502)
Q Consensus       386 a~~l~~~l~~~~~~~l~~~-~--~~-~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~  461 (502)
                      ++++++.|+++++++++.+ +  .. .+++|++++..                          .....++..++.++|.+
T Consensus       281 ~~~l~~~l~~~~~~~~~~~~~~~~s~~i~~~~~~~~~--------------------------~~~~~~~~~~l~~~~i~  334 (378)
T PRK03080        281 ASVLYDWAEKTPWATPLVADPATRSNTSVTLDFVDAQ--------------------------AAVDAAAVAKLLRENGA  334 (378)
T ss_pred             HHHHHHHHHhCCCcccccCCccccCccEEEEEcCCch--------------------------HHHHHHHHHHHHHcCCe
Confidence            9999999999987887642 2  23 47788764310                          01122345555556654


Q ss_pred             EEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          462 FMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       462 ~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      +..+......+.+|+|++ .+++++||++++++|+++.++
T Consensus       335 v~~g~~~~~~~~vRis~~-~~~t~~di~~l~~al~~~~~~  373 (378)
T PRK03080        335 VDIEPYRDAPNGLRIWCG-PTVEPADVEALTPWLDWAFER  373 (378)
T ss_pred             eccccccCCCCcEEEecC-CCCCHHHHHHHHHHHHHHHHH
Confidence            332221112468999976 567788999999999987654

>PLN02721 threonine aldolase

Probab=99.91  E-value=2.1e-22  Score=203.48  Aligned_cols=306  Identities=15%  Similarity=0.136  Sum_probs=193.4

Q ss_pred             cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144          110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ  189 (502)
Q Consensus       110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~  189 (502)
                      .+|...++|+.    +++++|.+         .++++++||++++.++.+....          +++.|++++.+|+++.
T Consensus        38 ~~~~~~~l~~~----la~~~~~~---------~~~~~~~Gs~a~~~~l~~~~~~----------~gd~Vl~~~~~~~~~~   94 (353)
T PLN02721         38 YDPTALRLEEE----MAKIFGKE---------AALFVPSGTMGNLISVLVHCDV----------RGSEVILGDNSHIHLY   94 (353)
T ss_pred             CCHHHHHHHHH----HHHHhCCc---------eeEEecCccHHHHHHHHHHccC----------CCCeEEEcCccceehh
Confidence            34555566655    56666654         2578888899988777665431          5678889999998877


Q ss_pred             H---HHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcC-CccEEEEEec-CCccccccCC---hhHHHHHHHH
Q 037144          190 K---AAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAE-LIPLFLCATV-GTTAITAVDP---LKPLCDVAKQ  261 (502)
Q Consensus       190 ~---aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g-~~p~~Vv~t~-gtt~~G~idp---l~eI~~i~~~  261 (502)
                      +   .+...|+   +++.+|.++  ++.+|+++|+++|++....+ ..+.+|+++. .++++|.+-|   +++|.++|++
T Consensus        95 ~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~  169 (353)
T PLN02721         95 ENGGISTLGGV---HPRTVKNNE--DGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKR  169 (353)
T ss_pred             cccchhhhcCc---eeEecCCCc--CCCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHH
Confidence            6   4677888   999999864  46899999999997432111 1344666655 4566787644   8899999999


Q ss_pred             hCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCc
Q 037144          262 FGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPK  341 (502)
Q Consensus       262 ~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~  341 (502)
                      +|+++|+|+||..+....... .......++|++++++|||++.|  .|++++.+++.... +.....+..         
T Consensus       170 ~g~~livD~a~~~~~~~~~~~-~~~~~~~~~d~~~~s~sK~l~~~--~G~~~~~~~~~~~~-~~~~~~~~~---------  236 (353)
T PLN02721        170 HGLKLHIDGARIFNASVALGV-PVHRLVKAADSVSVCLSKGLGAP--VGSVIVGSKSFIRK-AKRLRKTLG---------  236 (353)
T ss_pred             cCCEEEEEchhhhcchhhhCC-CHHHHhhhCCEEEEecccccCCc--eeeEEecCHHHHHh-HHHHHHhcC---------
Confidence            999999999874322111111 11111237899999999999876  44444455544321 111000000         


Q ss_pred             ccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE-ecCCCeeEEEEEeecCcch
Q 037144          342 EQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEV-AFPRNFSLVCFRVTPSAVM  420 (502)
Q Consensus       342 ~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l-~~~~~~~~v~f~~~~~~~~  420 (502)
                                  ++.+........++..+  +...+.+++..++++++.+.|++++++++ +.++..+++.+++....  
T Consensus       237 ------------~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~--  300 (353)
T PLN02721        237 ------------GGMRQVGVLAAAALVAL--QENVPKLEDDHKKAKLLAEGLNQIKGLRVNVAAVETNIVYFDITDGS--  300 (353)
T ss_pred             ------------CCeehhHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhCCCcEEecCCccceEEEEEccCCc--
Confidence                        00000111111122211  22223345556788999999999988876 55666777777764310  


Q ss_pred             hhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144          421 DKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~  500 (502)
                                              ......++++|.+.|..+...    +..++|++++ +..+++|+++++++|++++.
T Consensus       301 ------------------------~~~~~~~~~~L~~~gi~v~~~----~~~~lR~~~~-~~~~~~~i~~~~~~l~~~~~  351 (353)
T PLN02721        301 ------------------------RITAEKLCKSLEEHGVLLMPG----NSSRIRVVTH-HQISDSDVQYTLSCFQQAAL  351 (353)
T ss_pred             ------------------------cccHHHHHHHHHhCCcEEecC----CCceEEEEec-CcCCHHHHHHHHHHHHHHhh
Confidence                                    001346777787778754433    3568999985 45678899999999998876


Q ss_pred             h
Q 037144          501 A  501 (502)
Q Consensus       501 ~  501 (502)
                      .
T Consensus       352 ~  352 (353)
T PLN02721        352 T  352 (353)
T ss_pred             c
Confidence            4

>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase

Probab=99.91  E-value=9.1e-22  Score=201.81  Aligned_cols=300  Identities=11%  Similarity=0.061  Sum_probs=197.7

Q ss_pred             HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH
Q 037144          115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI  194 (502)
Q Consensus       115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~  194 (502)
                      ..+..++.+.+++++|.+         .+++++||++|+..++.+...           +++.|+++...|.++..++++
T Consensus        82 ~~~~~~le~~ia~~~g~~---------~~ii~~~~~~a~~~~~~~l~~-----------~gd~vi~~~~~~~s~~~~~~~  141 (393)
T TIGR01822        82 QDIHKELEAKIAAFLGTE---------DTILYASCFDANGGLFETLLG-----------AEDAIISDALNHASIIDGVRL  141 (393)
T ss_pred             hHHHHHHHHHHHHHhCCC---------cEEEECchHHHHHHHHHHhCC-----------CCCEEEEeccccHHHHHHHHh
Confidence            344455667788888874         357778889998755544322           678899999999999999888


Q ss_pred             cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccccc
Q 037144          195 VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAG  274 (502)
Q Consensus       195 ~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~  274 (502)
                      .+.   ..+.++       .+|+++|+++|++..+.+.++.+|+.....+++|.+.|+++|+++|++||+|+++|++|+.
T Consensus       142 ~~~---~~~~~~-------~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~l~~i~~la~~~~~~li~De~~~~  211 (393)
T TIGR01822       142 CKA---KRYRYA-------NNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAPLDEICDLADKYDALVMVDECHAT  211 (393)
T ss_pred             cCC---ceEEeC-------CCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCCHHHHHHHHHHcCCEEEEECCccc
Confidence            887   654443       4799999999987543333456788777889999999999999999999999999999965


Q ss_pred             ccccCccchhh--hcCC-CCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCccc
Q 037144          275 SACICPEFRHF--IDGV-ECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQ  351 (502)
Q Consensus       275 ~~~~~~~~~~~--~~~~-~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~  351 (502)
                      +.+... ....  ..++ .++|.++.++||+++++ ..|+++.+ +............|...                  
T Consensus       212 g~~~~~-~~~~~~~~~~~~~~di~~~s~sK~l~g~-r~G~~~~~-~~~~~~l~~~~~~~~~~------------------  270 (393)
T TIGR01822       212 GFLGPT-GRGSHELCGVMGRVDIITGTLGKALGGA-SGGFTTAR-KEVVELLRQRSRPYLFS------------------  270 (393)
T ss_pred             cCcCCC-CCchHHhcCCCCCCeEEEEEChHHhhCC-CcEEEEeC-HHHHHHHHHhCccceec------------------
Confidence            543211 1110  1122 26899999999998754 45776653 33322211111122111                  


Q ss_pred             ccCCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCC
Q 037144          352 ITLCRRF-RSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNG  430 (502)
Q Consensus       352 ~~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~  430 (502)
                        ++... ...++..+++.+  +..+++.++..++++++.+.|++. ++++. ++..+++.+...+              
T Consensus       271 --~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~i~~~~--------------  330 (393)
T TIGR01822       271 --NSLPPAVVGASIKVLEML--EASNELRDRLWANTRYFRERMEAA-GFDIK-PADHPIIPVMLYD--------------  330 (393)
T ss_pred             --CCCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCCCC-CCCCCEEEEEeCC--------------
Confidence              11111 112233344433  335667788899999999999886 78765 3345566554432              


Q ss_pred             CcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeE----CCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          431 TYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIV----GGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       431 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~----~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                                    .....++.+.|.++|.. +.+..+    .+...+|++++ ..++++||+++++.|+++.++
T Consensus       331 --------------~~~~~~l~~~L~~~gI~-v~~~~~~~~~~~~~~iRis~~-~~~t~edi~~~~~~l~~~~~~  389 (393)
T TIGR01822       331 --------------AVLAQRFARRLLEEGIY-VTGFFYPVVPKGQARIRVQIS-AAHTEEQLDRAVEAFTRIGRE  389 (393)
T ss_pred             --------------HHHHHHHHHHHHHCCee-EeeeCCCCCCCCCceEEEEEC-CCCCHHHHHHHHHHHHHHHHH
Confidence                          11235677788888854 333222    24457999986 456677999999999998764

This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.

>cd00609 AAT_like Aspartate aminotransferase family

Probab=99.91  E-value=5.7e-22  Score=199.53  Aligned_cols=318  Identities=16%  Similarity=0.080  Sum_probs=213.1

Q ss_pred             hhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEE
Q 037144           99 SGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVV  178 (502)
Q Consensus        99 ~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v  178 (502)
                      ...+.+...|...++..++++.+.+++...+|.+...     ...++++|+|+++..++.+...           ++++|
T Consensus        23 ~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~-----~~~~~~~~~t~a~~~~~~~~~~-----------~g~~v   86 (350)
T cd00609          23 AALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPP-----EEIVVTNGAQEALSLLLRALLN-----------PGDEV   86 (350)
T ss_pred             HhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCc-----ceEEEecCcHHHHHHHHHHhCC-----------CCCEE
Confidence            4455555667777888999999999999988753321     2578899999988776665532           56789


Q ss_pred             EeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCH--HHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHH
Q 037144          179 YSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSA--ESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLC  256 (502)
Q Consensus       179 ~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~--~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~  256 (502)
                      +++...|.++..+++..|.   +++.+|+++.  +.++.  +.++..+.+      .+.+|+++.+++++|.+.|++++.
T Consensus        87 l~~~~~~~~~~~~~~~~~~---~~~~i~~~~~--~~~~~~~~~~~~~~~~------~~~~v~i~~~~~~tG~~~~~~~l~  155 (350)
T cd00609          87 LVPDPTYPGYEAAARLAGA---EVVPVPLDEE--GGFLLDLELLEAAKTP------KTKLLYLNNPNNPTGAVLSEEELE  155 (350)
T ss_pred             EEcCCCchhHHHHHHHCCC---EEEEEecccc--cCCccCHHHHHhhcCc------cceEEEEECCCCCCCcccCHHHHH
Confidence            9999999999999999999   9999999864  34544  555544432      245788888999999999866665


Q ss_pred             ---HHHHHhCCEEEeecccccccccCccchh-hhcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcccc
Q 037144          257 ---DVAKQFGIWVHVDAAYAGSACICPEFRH-FIDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYL  331 (502)
Q Consensus       257 ---~i~~~~g~~lhVDaA~g~~~~~~~~~~~-~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl  331 (502)
                         ++|+++|+|+|+|+||+++......... ...+....|.+..++||+++ .+.++|++++++..... .+.....+.
T Consensus       156 ~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~-~~~~~~~~~  234 (350)
T cd00609         156 ELAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLE-RLKKLLPYT  234 (350)
T ss_pred             HHHHHHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCHHHHHH-HHHHHHHhc
Confidence               8999999999999999876643221100 01122357888899999998 55678888876643332 222111111


Q ss_pred             cCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEE
Q 037144          332 KNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVC  411 (502)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~  411 (502)
                      ..                    .........++.+++.. .+++.++.++..++++++.+.|++.+...+..++...+++
T Consensus       235 ~~--------------------~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~g~~~~  293 (350)
T cd00609         235 TS--------------------GPSTLSQAAAAAALDDG-EEHLEELRERYRRRRDALLEALKELGPLVVVKPSGGFFLW  293 (350)
T ss_pred             cc--------------------CCChHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCccEEEE
Confidence            00                    00011223444444432 2788888999999999999999998655433233344555


Q ss_pred             EEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC--CEEEEEEEecCCCCcHHHHH
Q 037144          412 FRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG--GIYVLRFAAGNSMTMESHVR  489 (502)
Q Consensus       412 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lR~~~~~~~t~~~di~  489 (502)
                      +.+.+..                            ..+.+.+.+.+.|.....+..+.  +..++|++++.+   .+||+
T Consensus       294 ~~~~~~~----------------------------~~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~---~~~i~  342 (350)
T cd00609         294 LDLPEGD----------------------------DEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATP---EEELE  342 (350)
T ss_pred             EecCCCC----------------------------hHHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCC---HHHHH
Confidence            5543320                            02234455555676544443333  567999999765   77999


Q ss_pred             HHHHHHH
Q 037144          490 AAWTVVQ  496 (502)
Q Consensus       490 ~~~~~l~  496 (502)
                      +++++|+
T Consensus       343 ~~~~al~  349 (350)
T cd00609         343 EALERLA  349 (350)
T ss_pred             HHHHHhh
Confidence            9999886

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi

>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]

Probab=99.91  E-value=1.1e-22  Score=194.48  Aligned_cols=305  Identities=19%  Similarity=0.212  Sum_probs=200.4

Q ss_pred             CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCC
Q 037144          105 GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQT  184 (502)
Q Consensus       105 ~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~  184 (502)
                      ...|...|....+|    +++++++|. .        .++|+++||+||..++.+..+           ++..|++.+.+
T Consensus        28 ~~~YG~D~~~~~~e----~~~ae~~g~-~--------a~~Fv~sGT~aN~lal~~~~~-----------~~~~vi~~~~a   83 (342)
T COG2008          28 DDVYGEDPTTNALE----QRIAELFGK-E--------AALFVPSGTQANQLALAAHCQ-----------PGESVICHETA   83 (342)
T ss_pred             CCCCCCCHHHHHHH----HHHHHHhCC-c--------eEEEecCccHHHHHHHHHhcC-----------CCCeEEEeccc
Confidence            44677777666655    557888888 2        489999999999999998874           67789999999


Q ss_pred             chhHHHH--HHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHH-hcCCccEEEEEecCCcccccc---CChhHHHHH
Q 037144          185 HCAFQKA--AQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDV-EAELIPLFLCATVGTTAITAV---DPLKPLCDV  258 (502)
Q Consensus       185 H~s~~~a--a~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~-~~g~~p~~Vv~t~gtt~~G~i---dpl~eI~~i  258 (502)
                      |...+..  ...++-    +.+++..++.+|.|++++++..|..+. -...+|.++..|..| ..|.+   |.|++|.++
T Consensus        84 Hi~~~E~Ga~~~~~~----~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~t-e~GtVy~l~el~~i~~~  158 (342)
T COG2008          84 HIYTDECGAPEFFGG----GQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTAT-EGGTVYPLDELEAISAV  158 (342)
T ss_pred             cceecccCcHHHHcC----CceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccC-CCceecCHHHHHHHHHH
Confidence            9877663  455552    344455544578999999999998632 223456677666655 77888   556677788


Q ss_pred             HHHhCCEEEeecccccccccC--ccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccC
Q 037144          259 AKQFGIWVHVDAAYAGSACIC--PEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEAT  336 (502)
Q Consensus       259 ~~~~g~~lhVDaA~g~~~~~~--~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~  336 (502)
                      ||++|+.||+|||.-+..+..  +....+.   ..+||+++++.|.++.|  .|.+++-+.+...++     .|......
T Consensus       159 ~k~~~l~LHmDGAR~~nA~valg~~~~~~~---~~~D~v~~~~tK~g~~~--~gAiv~gn~~~~~~a-----~~~rK~~G  228 (342)
T COG2008         159 CKEHGLPLHMDGARLANALVALGVALKTIK---SYVDSVSFCLTKGGGAP--VGAIVFGNRDFAKRA-----RRWRKRAG  228 (342)
T ss_pred             HHHhCCceeechHHHHHHHHHcCCCHHHHH---hhCCEEEEecccCCcce--eeeEEEcCHHHHHHH-----HHHHHHhc
Confidence            999999999999864443322  2222222   38999999999999988  445555555443322     22211100


Q ss_pred             CCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeec
Q 037144          337 DQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTP  416 (502)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~  416 (502)
                            +          +-|..+-+++ ..+.++...-+...-++...+|++|.+.+.+.||+++..+++.|+|.++.+.
T Consensus       229 ------g----------l~~k~r~laA-~~~~~l~~~~~~~~~~Han~mA~~La~~~~~~~G~~~~~~~~tN~vf~~l~~  291 (342)
T COG2008         229 ------G----------LMRKARFLAA-QGLYALEDDVWRLAADHANAMAARLAEGLEAKPGVKLAFPVETNMVFVRLPE  291 (342)
T ss_pred             ------c----------cHhhhhHHHH-HHHHHHhccHHHHHHHHHHHHHHHHHHhhhhcCCceeccCCcccEEEEECCh
Confidence                  0          1111121211 1122223333555666777889999999998899999988899998877653


Q ss_pred             CcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCE-EEEEEEecCCCCcHHHHHHHHHHH
Q 037144          417 SAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGI-YVLRFAAGNSMTMESHVRAAWTVV  495 (502)
Q Consensus       417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~-~~lR~~~~~~~t~~~di~~~~~~l  495 (502)
                      .                                . .+.+...|..+......... ..+|++ +++.++++||++++..+
T Consensus       292 ~--------------------------------~-i~~l~~~~~~~~~~~~~~~~~~~vRfv-ts~a~~~edv~~~~~~~  337 (342)
T COG2008         292 S--------------------------------A-IEALRLAGALFYRGVLIGAHGEIVRFV-TSWATSEEDVDELVAAI  337 (342)
T ss_pred             H--------------------------------H-HHHHHhhchhheeeeeccCCCceEEEE-eeccCCHHHHHHHHHHH
Confidence            2                                1 13333334433222111122 479998 57999999999999999


Q ss_pred             HHHH
Q 037144          496 QEHL  499 (502)
Q Consensus       496 ~~~~  499 (502)
                      +++.
T Consensus       338 ~~~~  341 (342)
T COG2008         338 KALL  341 (342)
T ss_pred             HHhh
Confidence            8764

>cd06502 TA_like Low-specificity threonine aldolase (TA)

Probab=99.91  E-value=1.3e-22  Score=203.69  Aligned_cols=296  Identities=16%  Similarity=0.076  Sum_probs=191.9

Q ss_pred             HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHH---HHH
Q 037144          117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQK---AAQ  193 (502)
Q Consensus       117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~---aa~  193 (502)
                      ...++.+++++++| +.        .+++++|||+++..++.+...           +++.|+++...|+++.+   .++
T Consensus        33 ~~~~l~~~~a~~~g-~~--------~~~~~~~gt~a~~~~~~~l~~-----------~gd~v~~~~~~~~~~~~~~~~~~   92 (338)
T cd06502          33 TTAKLEARAAELFG-KE--------AALFVPSGTAANQLALAAHTQ-----------PGGSVICHETAHIYTDEAGAPEF   92 (338)
T ss_pred             HHHHHHHHHHHHhC-CC--------eEEEecCchHHHHHHHHHhcC-----------CCCeEEEecCcceeeecCCcHHH
Confidence            34456678889998 43        578999999998877765532           57788899999988654   356


Q ss_pred             HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhc-CCccEEEEEecCCcccc--ccCChhHHHHHHHHhCCEEEeec
Q 037144          194 IVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEA-ELIPLFLCATVGTTAIT--AVDPLKPLCDVAKQFGIWVHVDA  270 (502)
Q Consensus       194 ~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~-g~~p~~Vv~t~gtt~~G--~idpl~eI~~i~~~~g~~lhVDa  270 (502)
                      +.|+   +++.+|.+   ++.+|+++|++++++..+. ..++.+|+++.++++.|  ..+++++|+++|+++|+++|||+
T Consensus        93 ~~g~---~~~~v~~~---~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~g~~~~~~~l~~i~~~~~~~~~~livDe  166 (338)
T cd06502          93 LSGV---KLLPVPGE---NGKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEGGTVYPLDELKAISALAKENGLPLHLDG  166 (338)
T ss_pred             HcCc---eEEeecCC---CCcCCHHHHHHHhhccCCCcCCcceEEEEEeecCCccccCHHHHHHHHHHHHHcCCeEeech
Confidence            6888   99999875   2589999999999753211 11345788888887633  24778899999999999999999


Q ss_pred             ccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcc
Q 037144          271 AYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDW  350 (502)
Q Consensus       271 A~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~  350 (502)
                      ||..+....... ........+|+++.++|||++.|.  |.+++.+++...........+-                   
T Consensus       167 a~~~~~~~~~~~-~~~~~~~~~d~~~~s~sK~~~~~~--g~~~~~~~~~~~~~~~~~~~~~-------------------  224 (338)
T cd06502         167 ARLANAAAALGV-ALKTYKSGVDSVSFCLSKGGGAPV--GAVVVGNRDFIARARRRRKQAG-------------------  224 (338)
T ss_pred             HHHHHHHHhcCC-CHHHHHhcCCEEEEeccccCCCcc--ceEEECCHHHHHHHHHHHHHhC-------------------
Confidence            985432211110 111111378999999999999875  3344445544322211110000                   


Q ss_pred             cccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCC
Q 037144          351 QITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNG  430 (502)
Q Consensus       351 ~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~  430 (502)
                         .+.+..++..++++..+...++.+++++..++++++.+.|+++ ++.+ .++..++++++....             
T Consensus       225 ---~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~-~~~~~~~~~v~~~~~-------------  286 (338)
T cd06502         225 ---GGMRQSGFLAAAGLAALENDLWLRRLRHDHEMARRLAEALEEL-GGLE-SEVQTNIVLLDPVEA-------------  286 (338)
T ss_pred             ---CChhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CCCc-ccccCCeEEEecCCc-------------
Confidence               0001123344455555544567778889999999999999988 4543 356778888876422             


Q ss_pred             CcccccccchhHhhHHHHHHHHHHHH---hcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHH
Q 037144          431 TYDQYRQFSEEERTNEFNRELLESIN---VSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQE  497 (502)
Q Consensus       431 ~~~~~~~~~~~~~~~~~~~~l~~~l~---~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~  497 (502)
                                    .....++.+++.   ++|..+...   . ..++|+++. ..++++|++++++++++
T Consensus       287 --------------~~~~~~l~~~l~~~~~~gi~~~~~---~-~~~lRi~~~-~~~~~~~i~~~~~~l~~  337 (338)
T cd06502         287 --------------NAVFVELSKEAIERRGEGVLFYAW---G-EGGVRFVTH-WDTTEEDVDELLSALKA  337 (338)
T ss_pred             --------------cHHHHHHHHHHHHhhhCCEEEEec---C-CCeEEEEee-cCCCHHHHHHHHHHHhc
Confidence                          112233334333   567543222   2 268999985 55667899999998865

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.

>PRK07179 hypothetical protein; Provisional

Probab=99.91  E-value=5.9e-22  Score=203.93  Aligned_cols=291  Identities=11%  Similarity=0.103  Sum_probs=194.7

Q ss_pred             hhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHH
Q 037144          113 AAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAA  192 (502)
Q Consensus       113 ~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa  192 (502)
                      ...++|    +.+++++|.+.         .++++||++||..++.+...           +++.|+++...|.++...+
T Consensus       100 ~~~~le----~~la~~~g~~~---------~~~~~sG~~An~~~l~~l~~-----------~g~~v~~~~~~h~s~~~~~  155 (407)
T PRK07179        100 PKPQFE----KKLAAFTGFES---------CLLCQSGWAANVGLLQTIAD-----------PNTPVYIDFFAHMSLWEGV  155 (407)
T ss_pred             HHHHHH----HHHHHHhCCCc---------EEEECCHHHHHHHHHHHhCC-----------CCCEEEEECCcCHHHHHHH
Confidence            344555    56778888753         58899999999887776543           4567888999999999988


Q ss_pred             HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccc
Q 037144          193 QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAY  272 (502)
Q Consensus       193 ~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~  272 (502)
                      +..|.   +++.++       ..|+++|+++|++..     +.+|++...++++|.+.|+++|.++|++||+++|+|++|
T Consensus       156 ~~~g~---~~~~~~-------~~d~~~l~~~l~~~~-----~~lV~v~~v~n~tG~i~pl~~I~~l~~~~~~~livDea~  220 (407)
T PRK07179        156 RAAGA---QAHPFR-------HNDVDHLRRQIERHG-----PGIIVVDSVYSTTGTIAPLADIVDIAEEFGCVLVVDESH  220 (407)
T ss_pred             HHCCC---eEEEec-------CCCHHHHHHHHHhcC-----CeEEEECCCCCCCCccccHHHHHHHHHHcCCEEEEECcc
Confidence            88888   665543       358999999996521     347888889999999999999999999999999999999


Q ss_pred             ccccccCccchhhh--cCC-CCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcC-CcccccCccCCCCCcccccCCC
Q 037144          273 AGSACICPEFRHFI--DGV-ECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLST-NPQYLKNEATDQEPKEQEVGYK  348 (502)
Q Consensus       273 g~~~~~~~~~~~~~--~~~-~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~  348 (502)
                      +.+... +..+..+  .++ .++|+++.++||+++.+  .|+++.++. .. +.+.. ..++...               
T Consensus       221 ~~g~~g-~~g~g~~~~~~~~~~vdi~~~S~sK~~g~~--~G~l~~~~~-~~-~~~~~~~~~~~~~---------------  280 (407)
T PRK07179        221 SLGTHG-PQGAGLVAELGLTSRVHFITASLAKAFAGR--AGIITCPRE-LA-EYVPFVSYPAIFS---------------  280 (407)
T ss_pred             cccCcC-CCCCchHHhcCCCCCCCEEEeechHhhhcc--CeEEEeCHH-HH-HHHHHhCcCeeeC---------------
Confidence            755431 1111111  122 35799999999999743  777776533 22 22211 1111111               


Q ss_pred             cccccCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcc
Q 037144          349 DWQITLCRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKY  427 (502)
Q Consensus       349 ~~~~~~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~  427 (502)
                           ++-. .....+.++++.+  +...++.++..+++++|++.|+++ |+++..  ..+++.+.+...          
T Consensus       281 -----~t~~~~~~aa~~aal~~~--~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~--~~~i~~l~~~~~----------  340 (407)
T PRK07179        281 -----STLLPHEIAGLEATLEVI--ESADDRRARLHANARFLREGLSEL-GYNIRS--ESQIIALETGSE----------  340 (407)
T ss_pred             -----CCCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCCCCC--CCCEEEEEeCCH----------
Confidence                 0000 1112233445443  223457788999999999999988 787652  346676664321          


Q ss_pred             cCCCcccccccchhHhhHHHHHHHHHHHHhcCcE---EEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          428 KNGTYDQYRQFSEEERTNEFNRELLESINVSGKV---FMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       428 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~---~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                                        .....+.+.|.++|..   ++.+....+..++|++++.. ++++||++++++|+++.++
T Consensus       341 ------------------~~~~~~~~~L~~~GI~~~~~~~p~~~~~~~~lRis~~~~-~t~edi~~~~~~l~~~~~~  398 (407)
T PRK07179        341 ------------------RNTEVLRDALEERNVFGAVFCAPATPKNRNLIRLSLNAD-LTASDLDRVLEVCREARDE  398 (407)
T ss_pred             ------------------HHHHHHHHHHHHCCceEeeecCCCCCCCCceEEEEECCC-CCHHHHHHHHHHHHHHHHh
Confidence                              1134566777778864   12222223457999998654 6677999999999988764

>PRK06108 aspartate aminotransferase; Provisional

Probab=99.90  E-value=1.5e-21  Score=199.35  Aligned_cols=327  Identities=13%  Similarity=0.116  Sum_probs=218.9

Q ss_pred             HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCC--CCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHH
Q 037144           90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDL--PKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKK  167 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~--~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~  167 (502)
                      +..+.+.+...+......|....+..++++.+.+|+.+.+|.  +.+       ..++|+|+++++..++.+...     
T Consensus        39 ~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~-------~i~~t~g~~~al~~~~~~l~~-----  106 (382)
T PRK06108         39 PDFIRDAAAAALADGETFYTHNLGIPELREALARYVSRLHGVATPPE-------RIAVTSSGVQALMLAAQALVG-----  106 (382)
T ss_pred             CHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcCcc-------eEEEeCChHHHHHHHHHHhcC-----
Confidence            445666666555444445777778889999999999999884  333       688999999998776665433     


Q ss_pred             hCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCC-CCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccc
Q 037144          168 IGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKS-SSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAI  246 (502)
Q Consensus       168 ~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~-~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~  246 (502)
                            +++.|+++...|..+...++..|+   +++.+|.+.+ +++.+|+++|++.+++.+      .+|+++.++|+|
T Consensus       107 ------~gd~vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~d~~~l~~~~~~~~------~~i~l~~p~NPt  171 (382)
T PRK06108        107 ------PGDEVVAVTPLWPNLVAAPKILGA---RVVCVPLDFGGGGWTLDLDRLLAAITPRT------RALFINSPNNPT  171 (382)
T ss_pred             ------CCCEEEEeCCCccchHHHHHHCCC---EEEEeeCCCCCCCccCCHHHHHHhcCccc------eEEEEECCCCCC
Confidence                  567788888999999999999999   9999999753 357899999999886433      367788899999


Q ss_pred             cccC---ChhHHHHHHHHhCCEEEeeccccccccc-Cccchhhhc--CCCCCCeeEEccCCcCC-CCCcceEEEeeCchh
Q 037144          247 TAVD---PLKPLCDVAKQFGIWVHVDAAYAGSACI-CPEFRHFID--GVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSC  319 (502)
Q Consensus       247 G~id---pl~eI~~i~~~~g~~lhVDaA~g~~~~~-~~~~~~~~~--~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~  319 (502)
                      |.+-   ++++|+++|+++|+|+++|.+|+.+... .........  ....-..+..+++|.++ .+..+|+++..+ ..
T Consensus       172 G~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~-~~  250 (382)
T PRK06108        172 GWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAPP-AL  250 (382)
T ss_pred             CcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeCCH-HH
Confidence            9874   5788999999999999999999876543 111111111  11122356778999886 456689888743 22


Q ss_pred             hhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 037144          320 LLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSDK  397 (502)
Q Consensus       320 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~  397 (502)
                      +. .+.....|...                    +   ...+...++...+  +.+.+++..++..++++++.+.|++++
T Consensus       251 ~~-~~~~~~~~~~~--------------------~---~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~  306 (382)
T PRK06108        251 GQ-VLEKLIEYNTS--------------------C---VAQFVQRAAVAALDEGEDFVAELVARLRRSRDHLVDALRALP  306 (382)
T ss_pred             HH-HHHHHHHhccc--------------------C---CChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            22 22111111100                    0   0122222223222  455678888889999999999999888


Q ss_pred             CeEEecCCCeeEEEE-EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh-cCcEEEEeeeEC--CEEE
Q 037144          398 RFEVAFPRNFSLVCF-RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV-SGKVFMTHAIVG--GIYV  473 (502)
Q Consensus       398 ~~~l~~~~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--g~~~  473 (502)
                      ++++. +|+.+++.| ++.+..                            ...++.+++.+ .|..+.++..+.  +..+
T Consensus       307 ~~~~~-~p~~g~~~~~~l~~~~----------------------------~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~  357 (382)
T PRK06108        307 GVEVA-KPDGAMYAFFRIPGVT----------------------------DSLALAKRLVDEAGLGLAPGTAFGPGGEGF  357 (382)
T ss_pred             CCccc-CCCeeEEEEEeCCCCC----------------------------CHHHHHHHHHHhCCEEEeCchhhCCCCCCE
Confidence            88876 455555544 443210                            02356666644 466544443332  3579


Q ss_pred             EEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144          474 LRFAAGNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       474 lR~~~~~~~t~~~di~~~~~~l~~~~~  500 (502)
                      +|++++.   ++++++.+++.|.++.+
T Consensus       358 ~Ris~~~---~~~~l~~~l~~l~~~l~  381 (382)
T PRK06108        358 LRWCFAR---DPARLDEAVERLRRFLA  381 (382)
T ss_pred             EEEEecC---CHHHHHHHHHHHHHHHh
Confidence            9999874   67799999999988764

>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I)

Probab=99.90  E-value=3e-21  Score=194.67  Aligned_cols=299  Identities=11%  Similarity=0.003  Sum_probs=196.2

Q ss_pred             hHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHH
Q 037144          114 AVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQ  193 (502)
Q Consensus       114 ~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~  193 (502)
                      ......++.+++++++|.++         .+++++|+++++.++.+...           +++.|+++...|.++..+++
T Consensus        44 ~~~~~~~l~~~la~~~~~~~---------~iv~~sg~~a~~~~~~~~~~-----------~gd~Vl~~~~~~~~~~~~~~  103 (349)
T cd06454          44 TSDLHEELEEELAEFHGKEA---------ALVFSSGYAANDGVLSTLAG-----------KGDLIISDSLNHASIIDGIR  103 (349)
T ss_pred             CchHHHHHHHHHHHHhCCCC---------EEEeccHHHHHHHHHHHhcC-----------CCCEEEEehhhhHHHHHHHH
Confidence            34555667778888888753         46777788888877655542           57788899999999999999


Q ss_pred             HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccc
Q 037144          194 IVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYA  273 (502)
Q Consensus       194 ~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g  273 (502)
                      ..|+   +++.++       .+|++.+++++++.. ...++.+|+++.+++++|.+.|+++|+++|+++|+++++|++|+
T Consensus       104 ~~g~---~~~~~~-------~~~~~~le~~i~~~~-~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~livD~a~~  172 (349)
T cd06454         104 LSGA---KKRIFK-------HNDMEDLEKLLREAR-RPYGKKLIVTEGVYSMDGDIAPLPELVDLAKKYGAILFVDEAHS  172 (349)
T ss_pred             HcCC---ceEEec-------CCCHHHHHHHHHHhh-ccCCCeEEEEeccccCCCCccCHHHHHHHHHHcCCEEEEEcccc
Confidence            9998   888775       247889999987643 12345688888899999999999999999999999999999997


Q ss_pred             cccccCcc-chhhhc-CCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCccc
Q 037144          274 GSACICPE-FRHFID-GVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQ  351 (502)
Q Consensus       274 ~~~~~~~~-~~~~~~-~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~  351 (502)
                      .+.+.... ...... ...+.|+++.++||+++.+ + |+++. ++..+.........|...                  
T Consensus       173 ~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~-g-G~i~~-~~~~~~~~~~~~~~~~~~------------------  231 (349)
T cd06454         173 VGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGAV-G-GYIAG-SKELIDYLRSYARGFIFS------------------  231 (349)
T ss_pred             ccccCCCCCChhhhccccccCcEEEeechhhhccc-C-CEEEC-CHHHHHHHHHhchhhhcc------------------
Confidence            54432110 000111 2236899999999999763 2 55544 343332221111111110                  


Q ss_pred             ccCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCC
Q 037144          352 ITLCRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNG  430 (502)
Q Consensus       352 ~~~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~  430 (502)
                        .+.. .....+..+++.+..  +.++.++..++++++.+.|.+. ++++..++...++++...+.             
T Consensus       232 --~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~~~~~~~~~~-------------  293 (349)
T cd06454         232 --TSLPPAVAAAALAALEVLQG--GPERRERLQENVRYLRRGLKEL-GFPVGGSPSHIIPPLIGDDP-------------  293 (349)
T ss_pred             --CCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhc-CCcccCCCCCcEEEEeCCCh-------------
Confidence              0000 112234445544322  4567788899999999999887 78776554433444433211             


Q ss_pred             CcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeee---ECCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144          431 TYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAI---VGGIYVLRFAAGNSMTMESHVRAAWTVVQEH  498 (502)
Q Consensus       431 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~---~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~  498 (502)
                                     ....++.+.|.++|........   ..+..++|++++ ..+++++|++++++|+++
T Consensus       294 ---------------~~~~~~~~~L~~~gI~~~~~~~~~~~~~~~~iRi~~~-~~~~~~~i~~~~~~l~~~  348 (349)
T cd06454         294 ---------------AKAVAFSDALLERGIYVQAIRYPTVPRGTARLRISLS-AAHTKEDIDRLLEALKEV  348 (349)
T ss_pred             ---------------HHHHHHHHHHHhCCceEEEecCCccCCCCCeEEEEEe-CCCCHHHHHHHHHHHHHh
Confidence                           1235678888888865433211   112468999986 446677999999999875

The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.

>PRK08361 aspartate aminotransferase; Provisional

Probab=99.90  E-value=1.3e-21  Score=200.42  Aligned_cols=331  Identities=11%  Similarity=0.120  Sum_probs=221.1

Q ss_pred             HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144           90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG  169 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~  169 (502)
                      +..+.+.+...+......|...++..++++.+.+++.+.+|.+-..     ...++|+|+++++..++.+...       
T Consensus        48 ~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~-----~~i~~t~G~~~al~~~~~~l~~-------  115 (391)
T PRK08361         48 PKNIKEAAKRALDEGWTHYTPNAGIPELREAIAEYYKKFYGVDVDV-----DNVIVTAGAYEATYLAFESLLE-------  115 (391)
T ss_pred             CHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCc-----ccEEEeCChHHHHHHHHHHhcC-------
Confidence            4556666665554444456666778899999999999888753211     2689999999998776665432       


Q ss_pred             ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144          170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV  249 (502)
Q Consensus       170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i  249 (502)
                          +++.|++++.+|.++...++..|+   +++.+|++.++++.+|+++|++.+++.+      .+|+++.++|+||.+
T Consensus       116 ----~g~~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~i~~~~------~~v~i~~p~NPtG~~  182 (391)
T PRK08361        116 ----EGDEVIIPDPAFVCYVEDAKIAEA---KPIRIPLREENEFQPDPDELLELITKRT------RMIVINYPNNPTGAT  182 (391)
T ss_pred             ----CCCEEEEcCCCCcccHHHHHHcCC---EEEEEecCCccCCCCCHHHHHHhccccc------EEEEEeCCCCCCCcC
Confidence                567888899999999999999999   9999999865567899999999987543      367788899999999


Q ss_pred             CC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhc
Q 037144          250 DP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLS  325 (502)
Q Consensus       250 dp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~  325 (502)
                      -|   +++|+++|+++++++++|.+|+.+.................+.++.+++|.++.| ..+|+++.. +..+.....
T Consensus       183 ~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlRiG~~~~~-~~~~~~~~~  261 (391)
T PRK08361        183 LDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMTGWRLGFVIAP-EQVIKDMIK  261 (391)
T ss_pred             cCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEecCchhcCCcHhhhhhhccC-HHHHHHHHH
Confidence            88   8899999999999999999997654422111111111113457788999998755 337888774 333322211


Q ss_pred             CCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cH--HHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 037144          326 TNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GV--ANLRNFIRSHVGMAKLFERLVTSDKRFEV  401 (502)
Q Consensus       326 ~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~--~g~~~~~~~~~~la~~l~~~l~~~~~~~l  401 (502)
                       ...+....                       ...+...++...+  +.  +.+++..+++.++++.+.+.|++++++++
T Consensus       262 -~~~~~~~~-----------------------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~  317 (391)
T PRK08361        262 -LHAYIIGN-----------------------VASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKV  317 (391)
T ss_pred             -HHhhhccC-----------------------CChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCee
Confidence             11111000                       0122233333333  21  34677788888889999999999888876


Q ss_pred             ecCCCeeEEEE-EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh-cCcEEEEeeeEC--CEEEEEEE
Q 037144          402 AFPRNFSLVCF-RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV-SGKVFMTHAIVG--GIYVLRFA  477 (502)
Q Consensus       402 ~~~~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--g~~~lR~~  477 (502)
                      . +|+.++++| ++++...                         +  ..++.+.+.+ .|..+.++..+.  +..++|++
T Consensus       318 ~-~p~g~~~~~~~l~~~~~-------------------------~--~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~  369 (391)
T PRK08361        318 F-EPKGAFYVFANIDETGM-------------------------S--SEDFAEWLLEKARVVVIPGTAFGKAGEGYIRIS  369 (391)
T ss_pred             c-CCCEEEEEEEECCCCCC-------------------------C--HHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEE
Confidence            5 455565554 4432111                         0  2345555554 466544433332  35799999


Q ss_pred             ecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          478 AGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       478 ~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      ++.   ++++++.+++.|+++.++
T Consensus       370 ~~~---~~~~l~~al~~l~~~l~~  390 (391)
T PRK08361        370 YAT---SKEKLIEAMERMEKALEE  390 (391)
T ss_pred             ecC---CHHHHHHHHHHHHHHHhc
Confidence            873   566899999999888765

>PRK05764 aspartate aminotransferase; Provisional

Probab=99.90  E-value=3.4e-21  Score=197.57  Aligned_cols=334  Identities=13%  Similarity=0.088  Sum_probs=221.0

Q ss_pred             HHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCc
Q 037144           91 GIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGR  170 (502)
Q Consensus        91 ~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~  170 (502)
                      ..+.+.+...+......|....+...+++.+.+|+.+.+|..-..     ...++|+|+++++..++.+...        
T Consensus        47 ~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~-----~~i~~~~g~~~a~~~~~~~~~~--------  113 (393)
T PRK05764         47 EHIKEAAIEALDDGKTKYTPAAGIPELREAIAAKLKRDNGLDYDP-----SQVIVTTGAKQALYNAFMALLD--------  113 (393)
T ss_pred             HHHHHHHHHHHhcCCCCcCCCCChHHHHHHHHHHHHHHhCCCCCH-----HHEEEeCCcHHHHHHHHHHhcC--------
Confidence            455566665554444456666677889999999998887753211     2589999999998776665533        


Q ss_pred             cCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc-
Q 037144          171 ENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV-  249 (502)
Q Consensus       171 ~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i-  249 (502)
                         +++.|+++...|..+..+++.+|+   +++.+|+++++.+.+|+++|++++++.+      .+|+++.++|++|.+ 
T Consensus       114 ---~gd~vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~~------~~v~~~~p~NPtG~~~  181 (393)
T PRK05764        114 ---PGDEVIIPAPYWVSYPEMVKLAGG---VPVFVPTGEENGFKLTVEQLEAAITPKT------KALILNSPSNPTGAVY  181 (393)
T ss_pred             ---CCCEEEecCCCCcchHHHHHHcCC---EEEEEecCcccCCcCCHHHHHHhhCccc------eEEEEECCCCCCCccc
Confidence               567888899999999999999999   9999999865567899999999886433      367788899999998 


Q ss_pred             --CChhHHHHHHHHhCCEEEeecccccccccCcc---chhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhh
Q 037144          250 --DPLKPLCDVAKQFGIWVHVDAAYAGSACICPE---FRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLST  323 (502)
Q Consensus       250 --dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~---~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~  323 (502)
                        +++++|+++|++||+|+++|.+|+...+..+.   ......+...-+.+..+++|.++.| ..+|+++. ++.... .
T Consensus       182 ~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~i~~-~~~~~~-~  259 (393)
T PRK05764        182 SPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGWRLGYAAG-PKELIK-A  259 (393)
T ss_pred             CHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCccceeEEEec-CHHHHH-H
Confidence              45889999999999999999999765432111   1111112223456777899999755 34677664 343322 2


Q ss_pred             hcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 037144          324 LSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSDKRFEV  401 (502)
Q Consensus       324 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l  401 (502)
                      +..   +....                    +-....+..+++.+.+  ..+.+.+..+++.++++++.+.|++++++++
T Consensus       260 ~~~---~~~~~--------------------~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~  316 (393)
T PRK05764        260 MSK---LQSHS--------------------TSNPTSIAQYAAVAALNGPQDEVEEMRQAFEERRDLMVDGLNEIPGLEC  316 (393)
T ss_pred             HHH---HHhhc--------------------ccCCChHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhhCCCCcc
Confidence            211   10000                    0011234445555554  2455667777888889999999999888887


Q ss_pred             ecCCCeeEEEE-EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh-cCcEEEEeeeECCEEEEEEEec
Q 037144          402 AFPRNFSLVCF-RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV-SGKVFMTHAIVGGIYVLRFAAG  479 (502)
Q Consensus       402 ~~~~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~g~~~lR~~~~  479 (502)
                      . +|..+.+.| .+.+...                       .......++.+.+.+ .|..+.++..+....++|++++
T Consensus       317 ~-~~~g~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~vRis~~  372 (393)
T PRK05764        317 P-KPEGAFYVFPNVSKLLG-----------------------KSITDSLEFAEALLEEAGVAVVPGIAFGAPGYVRLSYA  372 (393)
T ss_pred             c-CCCcceEEEEecccccc-----------------------cccCCHHHHHHHHHHhCCEEEccccccCCCCEEEEEec
Confidence            6 455444433 3432100                       000012456666554 4765555444444679999987


Q ss_pred             CCCCcHHHHHHHHHHHHHHHHh
Q 037144          480 NSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       480 ~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      .   ++++++++++.|.++.++
T Consensus       373 ~---~~~~~~~~i~~l~~~~~~  391 (393)
T PRK05764        373 T---SLEDLEEGLERIERFLES  391 (393)
T ss_pred             C---CHHHHHHHHHHHHHHHHh
Confidence            3   578999999999988764

>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family

Probab=99.89  E-value=2.6e-22  Score=202.37  Aligned_cols=339  Identities=11%  Similarity=0.038  Sum_probs=216.7

Q ss_pred             ccCCCCCCHHHHHHHHHHhhc----CCCCcccccC---hhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCC-chHH
Q 037144           81 AYFPATSSVAGIVGEMLSSGF----NVVGLDWISS---PAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGT-TCEA  152 (502)
Q Consensus        81 ~~~~~~~~~~~~~~~~l~~~~----n~~~~~~~~~---p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~g-gt~a  152 (502)
                      .|.+++...|..+.+.+...+    |.....+..+   +.+.++-.++++.+++++|.+...      ..+||+| ||++
T Consensus         2 ~~~pGp~~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~------~vvf~~gs~T~a   75 (355)
T cd00611           2 NFSAGPAALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNY------KVLFLQGGATGQ   75 (355)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCc------eEEEEcCCchHH
Confidence            355667777777777766665    4445555555   566788889999999999986543      6788877 8988


Q ss_pred             HHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccC-HHHHHHHHHHHHhcC
Q 037144          153 LLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLS-AESVLSQINLDVEAE  231 (502)
Q Consensus       153 ~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d-~~~Le~~i~~~~~~g  231 (502)
                      +..++.....        .+.++++|+++...|.+ .+.++..|+   +++.+++++++. ..+ ++..+..++++    
T Consensus        76 ~~~~~~~l~~--------~~~~~~~i~~g~~~~~~-~~~a~~~g~---~~~~~~~~~~g~-~~~~~~~~~~~~~~~----  138 (355)
T cd00611          76 FAAVPLNLLG--------DKGTADYVVTGAWSAKA-AKEAKRYGG---VVVIVAAKEEGK-YTKIPDVETWDLAPD----  138 (355)
T ss_pred             HHHHHHhcCC--------CCCeEEEEECCHHHHHH-HHHHHhcCC---CcEEEecccccC-CCCCCCHhhcCCCCC----
Confidence            7655544311        11245677766555544 445677899   999999864321 113 22222333333    


Q ss_pred             CccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceE
Q 037144          232 LIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCC  311 (502)
Q Consensus       232 ~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~  311 (502)
                        +.+|++++.+|.+|.+  ++   ++++.||+.++||++++.+..+.+-.        ..|....++||+++ |.|.|+
T Consensus       139 --~~lV~~~h~~t~tG~~--~~---~i~~~~g~~~~VDa~qs~g~~~idv~--------~~~~~~ss~~K~lG-P~G~g~  202 (355)
T cd00611         139 --AAYVHYCSNETIHGVE--FD---EVPDTGGVPLVADMSSNILSRPIDVS--------KFGVIYAGAQKNLG-PAGVTV  202 (355)
T ss_pred             --CCEEEEeCCcccccEE--cc---eecccCCCeEEEEccccccCCCCCHH--------HhCEEEeecccccC-CCceEE
Confidence              3389999999999997  22   44556999999999999998877532        23445566999875 999999


Q ss_pred             EEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHH-HHHHHHHHHHHHHHHHH
Q 037144          312 LWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVA-NLRNFIRSHVGMAKLFE  390 (502)
Q Consensus       312 ~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~-g~~~~~~~~~~la~~l~  390 (502)
                      ++++++..- ..-...+.+.....        ...... ...+..-....++..+++.+-.+ |++++.+++.+++++++
T Consensus       203 l~~~~~~~~-~~~~~~~~~~~~~~--------~~~~~~-~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~  272 (355)
T cd00611         203 VIVRKDLLG-KARKITPSMLNYKT--------HADNNS-LYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLY  272 (355)
T ss_pred             EEECHHHHh-hcccCCCCcccHHH--------HHhcCC-CCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence            999876432 11111111111000        000000 00000011335777888888777 79999999999999999


Q ss_pred             HHHhcCCCeE-EecC--CCe-eEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEee
Q 037144          391 RLVTSDKRFE-VAFP--RNF-SLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHA  466 (502)
Q Consensus       391 ~~l~~~~~~~-l~~~--~~~-~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~  466 (502)
                      +.|+++||+. ...+  .++ .+++|.+...                            .+..++.+.+.++|.+ ....
T Consensus       273 ~~l~~~~gl~~~~~~~~~rs~~vvsf~~~~~----------------------------~l~~~~~~~~~r~G~~-~~~~  323 (355)
T cd00611         273 DTIDNSNGFYRGPVDKRARSRMNVPFRLGKE----------------------------ELEKEFLKEAEAAGMI-GLKG  323 (355)
T ss_pred             HHHHhCccccccCCCHHHcCceEEEEEcCCh----------------------------hhhHHHHHHHHHCCCc-ccCC
Confidence            9999998863 2111  134 4588876431                            1223444566677874 3322


Q ss_pred             eECCEEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144          467 IVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHL  499 (502)
Q Consensus       467 ~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~  499 (502)
                       ....+.+|+|+. +.++++|||+++++|+++.
T Consensus       324 -~~~~g~vR~S~~-~~nt~edi~~l~~al~~~~  354 (355)
T cd00611         324 -HRSVGGIRASIY-NALSLEGVQALADFMKEFQ  354 (355)
T ss_pred             -CcccCeEEEEcc-CCCCHHHHHHHHHHHHHHh
Confidence             222368999986 4567779999999998863

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.

>PLN02483 serine palmitoyltransferase

Probab=99.89  E-value=2.5e-20  Score=194.76  Aligned_cols=345  Identities=12%  Similarity=0.047  Sum_probs=212.3

Q ss_pred             CCCCCCcccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchH
Q 037144           72 THWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCE  151 (502)
Q Consensus        72 ~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~  151 (502)
                      .++.+-.|+|+....+..+..+.+.+..+-........ .-+......++.+.+++++|.++         .++.++|+.
T Consensus       103 ~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~-~~g~~~~~~ele~~lA~~~g~~~---------ai~~~~G~~  172 (489)
T PLN02483        103 LNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSSRV-DGGTTKLHRELEELVARFVGKPA---------AIVFGMGYA  172 (489)
T ss_pred             EEeecCCccCcCCCCHHHHHHHHHHHHHhCCCCCcccc-ccCCcHHHHHHHHHHHHHhCCCc---------EEEECCHHH
Confidence            34667788888755555556666666554211111110 01123344445566788888654         355566777


Q ss_pred             HHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcC
Q 037144          152 ALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAE  231 (502)
Q Consensus       152 a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g  231 (502)
                      +|+.++.+...           +++.|++++..|.|+..+++..|+   +++.++.+       |+++|++.|++....+
T Consensus       173 an~~~i~al~~-----------~Gd~Vi~d~~~h~s~~~~~~~~Ga---~v~~~~~~-------d~~~le~~l~~~i~~~  231 (489)
T PLN02483        173 TNSTIIPALIG-----------KGGLIISDSLNHNSIVNGARGSGA---TIRVFQHN-------TPSHLEEVLREQIAEG  231 (489)
T ss_pred             HHHHHHHHhCC-----------CCCEEEEcchhhHHHHHHHHHcCC---eEEEEeCC-------CHHHHHHHHHhhhhcc
Confidence            78755554322           678899999999999999999999   99999864       5678888776543211


Q ss_pred             -------CccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhh--hcC--CCCCCeeEEccC
Q 037144          232 -------LIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF--IDG--VECVDSFSFNPH  300 (502)
Q Consensus       232 -------~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~--~~~--~~~aDsi~~~~h  300 (502)
                             ....+|++....+++|.+.++++|+++|++||+++++|.||+.+.+. +..+..  ..+  ..++|.++.+++
T Consensus       232 ~p~t~~p~~k~livve~v~s~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~G-~~G~g~~~~~~v~~~~~dI~~~SfS  310 (489)
T PLN02483        232 QPRTHRPWKKIIVIVEGIYSMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAVG-KTGRGVCELLGVDPADVDIMMGTFT  310 (489)
T ss_pred             ccccccCCceEEEEECCCCCCCCcccCHHHHHHHHHHcCCEEEEECcCccCccC-CCCCchHHhcCCCcccCcEEEEecc
Confidence                   11245666666789999999999999999999999999999754321 111110  111  236789999999


Q ss_pred             CcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh----cHHHHH
Q 037144          301 KWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF----GVANLR  376 (502)
Q Consensus       301 K~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~----g~~g~~  376 (502)
                      |+++.+ | |+++ .++..+.........+.....                   ..+..+..+.++++.+    |.+...
T Consensus       311 Ks~g~~-G-G~i~-~~~~li~~l~~~~~~~~~~~~-------------------~~p~~~~~~~aaL~~l~~~~g~~~~~  368 (489)
T PLN02483        311 KSFGSC-G-GYIA-GSKELIQYLKRTCPAHLYATS-------------------MSPPAVQQVISAIKVILGEDGTNRGA  368 (489)
T ss_pred             hhcccC-c-eEEE-cCHHHHHHHHHhCccccccCC-------------------cCHHHHHHHHHHHHHHHhCccccchH
Confidence            999754 2 5554 344433222111111211100                   0000111223344432    122345


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH
Q 037144          377 NFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN  456 (502)
Q Consensus       377 ~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~  456 (502)
                      +++++..+++++|++.|+++ |+++..+...+++.+.+...                            ....++.++|.
T Consensus       369 ~~~~~l~~~~~~l~~~L~~~-G~~v~~~~~sp~~~l~l~~~----------------------------~~~~~~~~~Ll  419 (489)
T PLN02483        369 QKLAQIRENSNFFRSELQKM-GFEVLGDNDSPVMPIMLYNP----------------------------AKIPAFSRECL  419 (489)
T ss_pred             HHHHHHHHHHHHHHHHHHHC-CCcccCCCCCCEEEEEECCH----------------------------HHHHHHHHHHH
Confidence            66788999999999999998 78876554455555544321                            11235667777


Q ss_pred             hcCcEEEEeeeE----CCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          457 VSGKVFMTHAIV----GGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       457 ~~g~~~~~~~~~----~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      ++|..+.. ..+    .+...+|++++..+ +++||++++++|.++.+.
T Consensus       420 ~~GI~v~~-~~fp~~p~~~~~vRi~isa~~-t~edId~~l~~L~~~~~~  466 (489)
T PLN02483        420 KQNVAVVV-VGFPATPLLLARARICISASH-SREDLIKALEVISEVGDL  466 (489)
T ss_pred             HCCcEEee-eCCCCCCCCCceEEEEeCCCC-CHHHHHHHHHHHHHHHHH
Confidence            77876553 222    23468999987554 556999999999998764

>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme

Probab=99.89  E-value=1.1e-20  Score=190.92  Aligned_cols=324  Identities=12%  Similarity=0.106  Sum_probs=199.6

Q ss_pred             CCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHH--
Q 037144           87 SSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRV--  164 (502)
Q Consensus        87 ~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~--  164 (502)
                      ..+|..+.+.+....+.    |.   ...++.+++.+++++++|.+         .+++|+|+|+|+..++.+....-  
T Consensus        23 s~~~~~v~~a~~~~~~~----~~---~~~~~~~~~~~~~a~~~g~~---------~~~~~~g~t~al~~al~al~~~Gd~   86 (363)
T TIGR01437        23 STVSDEVADAQKRGAQN----YF---EIKELVNKTGEYIANLLGVE---------DAVIVSSASAGIAQSVAAVITRGNR   86 (363)
T ss_pred             CCCCHHHHHHHHHHHhc----CC---CHHHHHHHHHHHHHHhhCCC---------eEEEEcCHHHHHHHHHHHHhcCCCc
Confidence            33555666666655533    11   23567788899999999975         36899999999998888764310  


Q ss_pred             --HHHhCccCCCCeEEEeCCCCchh-----HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEE
Q 037144          165 --LKKIGRENISKLVVYSSDQTHCA-----FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFL  237 (502)
Q Consensus       165 --~~~~~~~~~~~~~v~~s~~~H~s-----~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~V  237 (502)
                        ..+......++..|+++. .|+.     +..++.+.|+   +++.++.+    +.+|+++|+++|+++++     .++
T Consensus        87 ~~~~~~~~s~~~~~eVi~~~-~~~~~~~~~~~~~~~~~g~---~~v~v~~~----~~~d~~~le~ai~~~t~-----ai~  153 (363)
T TIGR01437        87 YLVENLHDSKIEVNEVVLPK-GHNVDYGAPVETMVRLGGG---KVVEAGYA----NECSAEQLEAAITEKTA-----AIL  153 (363)
T ss_pred             chhhcccccccccceEEEEC-ccchhcCCchHHHHHhcCC---eEEEEcCC----CCCCHHHHHHhcChhce-----EEE
Confidence              000000001233667765 5543     3467788899   89888763    37999999999987764     244


Q ss_pred             EEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCc
Q 037144          238 CATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDP  317 (502)
Q Consensus       238 v~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~  317 (502)
                      .++.+++++|.+.|+++|+++|++||+++|+|+||+..   ......    + ++|++++++||++.+|. .|+++.+ +
T Consensus       154 ~v~~~~~~~g~~~~~~~i~~~a~~~gi~vivD~a~~~~---~~~~~~----~-g~D~~~~S~~K~l~gp~-~G~l~~~-~  223 (363)
T TIGR01437       154 YIKSHHCVQKSMLSVEDAAQVAQEHNLPLIVDAAAEED---LQKYYR----L-GADLVIYSGAKAIEGPT-SGLVLGK-K  223 (363)
T ss_pred             EEecCCCCcCCcCCHHHHHHHHHHcCCeEEEECCCCCc---hHHHHH----c-CCCEEEEeCCcccCCCc-eEEEEEc-H
Confidence            46677789999999999999999999999999999621   111111    1 68999999999998886 6776653 3


Q ss_pred             hhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 037144          318 SCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK  397 (502)
Q Consensus       318 ~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~  397 (502)
                      ..+... .   .+.....       .       .++.+. ...+.+..++..+-..+. +.++...++++++++.|.++|
T Consensus       224 ~~i~~~-~---~~~~~~~-------~-------~~~~~~-~~~~gl~aAl~~~~~~~~-~~~~~~~~~~~~l~~~L~~i~  283 (363)
T TIGR01437       224 KYIEWV-K---LQSKGIG-------R-------AMKVGK-ENILGLTAALEQYLSTGK-ESGAEMVAKLTPFIEALNTLK  283 (363)
T ss_pred             HHHHHH-H---hccCCCc-------c-------eeccCH-HHHHHHHHHHHHHHccCc-ccHHHHHHHHHHHHHHHhcCC
Confidence            333211 1   0110000       0       000000 112455556655422222 333444556778999999999


Q ss_pred             CeEEecCCC-------eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECC
Q 037144          398 RFEVAFPRN-------FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGG  470 (502)
Q Consensus       398 ~~~l~~~~~-------~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g  470 (502)
                      |+++..++.       ...+.|.....+.                           ...++.+.|.+.+.-+.....+..
T Consensus       284 g~~~~~~~~~~~~~~~~~~v~~~~~~~g~---------------------------~~~~l~~~L~~~~~~I~~r~~~~~  336 (363)
T TIGR01437       284 GVSASIVQDEAGRDIARAEIRFDESELGM---------------------------TAADVVQALRQGEPAIYTRGYKAN  336 (363)
T ss_pred             CeEEEEecCCCCCcCceEEEEEeccCCCC---------------------------CHHHHHHHHhcCCCCEEEeeeeec
Confidence            999874221       1223333211111                           134677777666643333322344


Q ss_pred             EEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144          471 IYVLRFAAGNSMTMESHVRAAWTVVQEH  498 (502)
Q Consensus       471 ~~~lR~~~~~~~t~~~di~~~~~~l~~~  498 (502)
                      .+.+|+....  ++++|++.++++|.++
T Consensus       337 ~~~~~l~~~~--~~~~e~~~~~~~l~~~  362 (363)
T TIGR01437       337 EGIIEIDPRS--VTGGQLDIIVERIREI  362 (363)
T ss_pred             CCeEEEEeec--CCHHHHHHHHHHHHHh
Confidence            5577877653  4588999999999875

This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.

>PRK07324 transaminase; Validated

Probab=99.88  E-value=1.2e-20  Score=191.78  Aligned_cols=318  Identities=9%  Similarity=0.022  Sum_probs=205.6

Q ss_pred             HHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCC
Q 037144           96 MLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISK  175 (502)
Q Consensus        96 ~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~  175 (502)
                      .+...++.....|....+..++++.+.+|+.   +++.+       ..++|+|+++++..++.+...           ++
T Consensus        46 ~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~---~~~~~-------~vi~t~G~~~al~~~~~~l~~-----------~g  104 (373)
T PRK07324         46 AFYQELGQKKLTYGWIEGSPEFKEAVASLYQ---NVKPE-------NILQTNGATGANFLVLYALVE-----------PG  104 (373)
T ss_pred             HHHHHHhcCCccCCCCCCCHHHHHHHHHHhc---CCChh-------hEEEcCChHHHHHHHHHHhCC-----------CC
Confidence            3333344444456555566777777666553   34433       589999999999887766543           67


Q ss_pred             eEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---h
Q 037144          176 LVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---L  252 (502)
Q Consensus       176 ~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l  252 (502)
                      +.|+++.++|.++...++..|.   +++.+|++.++++.+|+++|++++++++      .+|+++.++|+||.+-+   +
T Consensus       105 d~Vl~~~P~y~~~~~~~~~~g~---~v~~v~~~~~~~~~~d~~~l~~~~~~~~------kli~i~~p~NPtG~~~~~~~l  175 (373)
T PRK07324        105 DHVISVYPTYQQLYDIPESLGA---EVDYWQLKEENGWLPDLDELRRLVRPNT------KLICINNANNPTGALMDRAYL  175 (373)
T ss_pred             CEEEEcCCCchhHHHHHHHcCC---EEEEEecccccCCCCCHHHHHHhCCCCC------cEEEEeCCCCCCCCCCCHHHH
Confidence            7888888999999999999999   9999999865457899999998876543      37888999999999977   8


Q ss_pred             hHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCC-CCcceEEEeeCchhhhhhhcCCcccc
Q 037144          253 KPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFT-TLDCCCLWVKDPSCLLSTLSTNPQYL  331 (502)
Q Consensus       253 ~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~-p~~~g~~~~r~~~~l~~~~~~~~~yl  331 (502)
                      ++|+++|++||+++++|.+|...... ........ ...-...+.+++|.++. ...+|+++. ++..+. .+.....+.
T Consensus       176 ~~i~~~a~~~~~~ii~De~y~~l~~~-~~~~s~~~-~~~~~I~~~s~SK~~~~~G~RiG~i~~-~~~li~-~~~~~~~~~  251 (373)
T PRK07324        176 EEIVEIARSVDAYVLSDEVYRPLDED-GSTPSIAD-LYEKGISTNSMSKTYSLPGIRVGWIAA-NEEVID-ILRKYRDYT  251 (373)
T ss_pred             HHHHHHHHHCCCEEEEEccccccccC-CCCCChhh-ccCCEEEEecchhhcCCccceeEEEec-CHHHHH-HHHHHhCcE
Confidence            99999999999999999999764432 11111111 11112445679999874 455788876 444332 221111111


Q ss_pred             cCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc--HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeE
Q 037144          332 KNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG--VANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSL  409 (502)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g--~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~  409 (502)
                      ..                    +   ...+..+++...+.  ..-+++..+...++++.+.+.|++.+++.... |..+.
T Consensus       252 ~~--------------------~---~~~~~q~~a~~~l~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~-p~gg~  307 (373)
T PRK07324        252 MI--------------------C---AGVFDDMLASLALEHRDAILERNRKIVRTNLAILDEWVAKEPRVSYVK-PKAVS  307 (373)
T ss_pred             Ee--------------------c---CChHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEEC-CCceE
Confidence            00                    0   02233333333332  23445556666777888888898888887764 44444


Q ss_pred             EEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeECCEEEEEEEecCCCCcHHHH
Q 037144          410 VCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVGGIYVLRFAAGNSMTMESHV  488 (502)
Q Consensus       410 v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di  488 (502)
                      ..|...+...                           ...++.+++. +.|..+.++..+...+++|++++.   +++.+
T Consensus       308 ~~~i~~~~~~---------------------------~~~~~~~~ll~~~gv~v~pg~~F~~~~~iRis~~~---~~~~l  357 (373)
T PRK07324        308 TSFVKLDVDM---------------------------PSEDFCLKLLKETGVLLVPGNRFDLEGHVRIGYCC---DTETL  357 (373)
T ss_pred             EEEEEeCCCC---------------------------CHHHHHHHHHHhcCEEEECccccCCCCeEEEEecC---CHHHH
Confidence            4443333210                           0234556654 447655555555556799999863   56789


Q ss_pred             HHHHHHHHHHHHh
Q 037144          489 RAAWTVVQEHLEA  501 (502)
Q Consensus       489 ~~~~~~l~~~~~~  501 (502)
                      ++.++.|.+..++
T Consensus       358 ~~~l~rl~~~l~~  370 (373)
T PRK07324        358 KKGLKKLSEFLRE  370 (373)
T ss_pred             HHHHHHHHHHHHh
Confidence            9999999887765

>PRK13580 serine hydroxymethyltransferase; Provisional

Probab=99.88  E-value=6.6e-21  Score=193.91  Aligned_cols=325  Identities=13%  Similarity=0.059  Sum_probs=206.8

Q ss_pred             cccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHH-----HHHhC-----------c-
Q 037144          108 WISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRV-----LKKIG-----------R-  170 (502)
Q Consensus       108 ~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~-----~~~~~-----------~-  170 (502)
                      |.......++|..+.+..+++||.+..        -+=.-||+.||+.+..+.....     +.+-|           + 
T Consensus        87 y~g~~~~d~ie~l~~~ra~~lf~a~~a--------nvqp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~  158 (493)
T PRK13580         87 YAGCQNVDTVEWEAAEHAKELFGAEHA--------YVQPHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWE  158 (493)
T ss_pred             cCCCchHHHHHHHHHHHHHHHhCCCcc--------cccCCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhh
Confidence            344556789999999999999998653        2334578899987777665420     00000           0 


Q ss_pred             ---cCCCCeEEEe---CCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCc
Q 037144          171 ---ENISKLVVYS---SDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTT  244 (502)
Q Consensus       171 ---~~~~~~~v~~---s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt  244 (502)
                         ..+.++.|+.   +.-.|.+.-......|... .++..+++.. ++.+|.+++++.+.+.+     | .|++++.++
T Consensus       159 ~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~-~~~~y~vd~~-~g~iD~d~l~~~~~~~~-----p-lvii~g~S~  230 (493)
T PRK13580        159 ALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMF-HQRSYGVDPD-TGLLDYDEIAALAREFK-----P-LILVAGYSA  230 (493)
T ss_pred             hhhccCCCCEEEeecCCCCCeeecCcccchhhhee-eeEecccCcc-cCccCHHHHHHHHhhcC-----C-EEEEeCccc
Confidence               0012344443   2334544433334444311 5566677643 57999999999998765     3 566667776


Q ss_pred             cccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhh
Q 037144          245 AITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTL  324 (502)
Q Consensus       245 ~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~  324 (502)
                      . |...|+++|.++|++||++++||+||+.+.+.............++|++++++||+|++|.| |++++++. . .+.+
T Consensus       231 ~-~~~~dl~~i~eia~~~gA~L~VD~AH~~Gligg~~~~~~~~~~~~~D~vtgT~hKaL~GP~G-G~I~~~~~-l-~~~L  306 (493)
T PRK13580        231 Y-PRRVNFAKLREIADEVGAVLMVDMAHFAGLVAGKVFTGDEDPVPHADIVTTTTHKTLRGPRG-GLVLAKKE-Y-ADAV  306 (493)
T ss_pred             c-CCCcCHHHHHHHHHHcCCEEEEECchhhceeccccchhhcCCCCCCcEEEeCChhhccCCCe-EEEEecHH-H-HHHH
Confidence            6 55779999999999999999999999998876443321122235899999999999988874 77777643 2 2223


Q ss_pred             cCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec-
Q 037144          325 STNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAF-  403 (502)
Q Consensus       325 ~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~-  403 (502)
                      ....+|+++....                    ....+...++.......+.++.++..+++++|++.|.+. ||.++. 
T Consensus       307 ~~a~P~i~gg~l~--------------------p~iAA~avAl~e~~~~ef~~y~~~l~~Na~~La~~L~~~-G~~vv~g  365 (493)
T PRK13580        307 DKGCPLVLGGPLP--------------------HVMAAKAVALAEARTPEFQKYAQQVVDNARALAEGFLKR-GARLVTG  365 (493)
T ss_pred             hhCCCcccCCCcc--------------------HHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHhc-CCCccCC
Confidence            2223455432210                    011222233444333345778899999999999999987 898863 


Q ss_pred             CCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEE---EeeeECC---EEEEEEE
Q 037144          404 PRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFM---THAIVGG---IYVLRFA  477 (502)
Q Consensus       404 ~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~---~~~~~~g---~~~lR~~  477 (502)
                      ..++.+|.+.+.+..                           .....+.+.|.+.|+.+-   .|++..+   ...||++
T Consensus       366 gTdshIV~V~lg~~~---------------------------~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg  418 (493)
T PRK13580        366 GTDNHLVLIDVTSFG---------------------------LTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLG  418 (493)
T ss_pred             CCCCCEEEEEeCCHH---------------------------HHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEEec
Confidence            245678877775421                           112345557777786432   2333334   5679999


Q ss_pred             ecCCCC---cHHHHHHHHHHHHHHHH
Q 037144          478 AGNSMT---MESHVRAAWTVVQEHLE  500 (502)
Q Consensus       478 ~~~~~t---~~~di~~~~~~l~~~~~  500 (502)
                      ++..++   +++||+++.+.|.++.+
T Consensus       419 ~~A~ttrg~teedi~~iad~l~~~l~  444 (493)
T PRK13580        419 TPALTTLGMGSDEMDEVAELIVKVLS  444 (493)
T ss_pred             cchhhhcCCCHHHHHHHHHHHHHHHH
Confidence            764322   57899999999987764

>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional

Probab=99.88  E-value=3.9e-20  Score=191.10  Aligned_cols=340  Identities=9%  Similarity=0.050  Sum_probs=219.9

Q ss_pred             HHHHHHHHHhhcCCC-CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHh
Q 037144           90 AGIVGEMLSSGFNVV-GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKI  168 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~-~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~  168 (502)
                      |..+.+.+...+... ...|....+..++++.+.+++.+.+|.+-..     ...++|+|+++++.+++.+..+      
T Consensus        71 ~~~~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~-----~~v~it~G~~~al~l~~~~l~~------  139 (430)
T PLN00145         71 APEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELST-----DDIYLTAGCAQAIEIIMSVLAQ------  139 (430)
T ss_pred             CHHHHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCCh-----hhEEEeCCHHHHHHHHHHHhcC------
Confidence            334555555555332 3356666678889999999998877764221     2689999999999877765532      


Q ss_pred             CccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144          169 GRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA  248 (502)
Q Consensus       169 ~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~  248 (502)
                           +++.|+++.+.+..+...+...|+   +++.+++.++.++.+|+++|++++++.+      .+++++.++|+||.
T Consensus       140 -----~Gd~Vlv~~P~y~~y~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~~~------~~i~i~~P~NPtG~  205 (430)
T PLN00145        140 -----PGANILLPRPGYPLYEARAVFSGL---EVRHFDLLPERGWEVDLEGVEALADENT------VAMVIINPNNPCGS  205 (430)
T ss_pred             -----CCCEEEEcCCCCccHHHHHHHcCC---EEEEeeCCcccCCcCCHHHHHHHhCcCc------eEEEEeCCCCCCCC
Confidence                 677899999999988889999999   9999998655568999999999886644      37888889999999


Q ss_pred             cCC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCC-CCee-EEccCCcC-CCCCcceEEEeeCchhhhh
Q 037144          249 VDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEC-VDSF-SFNPHKWL-FTTLDCCCLWVKDPSCLLS  322 (502)
Q Consensus       249 idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~-aDsi-~~~~hK~l-~~p~~~g~~~~r~~~~l~~  322 (502)
                      +-|   +++|+++|+++|+++++|.+|+.+.+........ ..+.. ...+ ..++.|.+ .....+|+++..++..+..
T Consensus       206 v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~-~~~~~~~~vi~~~S~SK~~~~pG~RlG~iv~~~~~~~~~  284 (430)
T PLN00145        206 VYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPM-GVFGEVAPVLTLGSISKRWVVPGWRLGWIATCDPNGILK  284 (430)
T ss_pred             CCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccch-hhhcccCcEEEEeccccccCCCCeeEEEEEEecchhhhh
Confidence            977   8888999999999999999997654322111111 11111 2234 45599995 4557789888754322110


Q ss_pred             h---hcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcC
Q 037144          323 T---LSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF---GVANLRNFIRSHVGMAKLFERLVTSD  396 (502)
Q Consensus       323 ~---~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---g~~g~~~~~~~~~~la~~l~~~l~~~  396 (502)
                      .   ......+....                   .  ....+..+++...+   ..+.+++.++...+.++.+.+.|+++
T Consensus       285 ~~~~~~~~~~~~~~~-------------------~--~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~  343 (430)
T PLN00145        285 ETKVVDSIRNYLNIS-------------------T--DPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKEI  343 (430)
T ss_pred             hhHHHHHHHHHhccc-------------------C--CCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            0   00000011000                   0  00122223333333   24567888888999999999999998


Q ss_pred             CCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeECCEEEEE
Q 037144          397 KRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVGGIYVLR  475 (502)
Q Consensus       397 ~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lR  475 (502)
                      +++++...|+.+++.|.-.+...                     ..... ...+++.++. +.|.+++++..++...++|
T Consensus       344 ~g~~~~~~P~ga~y~~v~l~~~~---------------------~~~~~-~~~~~~~~ll~~~gV~v~pG~~fg~~~~lR  401 (430)
T PLN00145        344 KCITCPHKPEGSMFVMVKLDLSC---------------------LSGIK-DDMDFCCKLAKEESVVVLPGSALGMKNWLR  401 (430)
T ss_pred             CCCCCCcCCCeeeEEEeccChhh---------------------cCCCC-CHHHHHHHHHHhCCEEEeCccccCCCCeEE
Confidence            88876545655555443322100                     00000 0123454444 4466555555566578999


Q ss_pred             EEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          476 FAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       476 ~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      ++++   .++++++.+++.|.+.+.+
T Consensus       402 is~~---~~~~~l~~al~rl~~~~~~  424 (430)
T PLN00145        402 ITFA---IDPPSLEDGLERLKSFCLR  424 (430)
T ss_pred             EEeC---CCHHHHHHHHHHHHHHHHH
Confidence            9997   3577899999999887654

>PRK06207 aspartate aminotransferase; Provisional

Probab=99.88  E-value=6.4e-20  Score=188.46  Aligned_cols=329  Identities=12%  Similarity=0.090  Sum_probs=214.4

Q ss_pred             HHHHHHHhhcCCC-CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCc
Q 037144           92 IVGEMLSSGFNVV-GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGR  170 (502)
Q Consensus        92 ~~~~~l~~~~n~~-~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~  170 (502)
                      .+.+.+...++.. ...|....+..++.+.+.+|+++.+|.+...    ....++|+|+++++..++.+..+        
T Consensus        57 ~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~----~~~I~it~Ga~~al~~~~~~l~~--------  124 (405)
T PRK06207         57 GAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDA----ADELIITPGTQGALFLAVAATVA--------  124 (405)
T ss_pred             HHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCCEEEeCCcHHHHHHHHHHhcC--------
Confidence            3444444444332 3456666677889999999999999964210    01689999999988776665443        


Q ss_pred             cCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCC---CCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccc
Q 037144          171 ENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTK---SSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAIT  247 (502)
Q Consensus       171 ~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~---~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G  247 (502)
                         +++.|++..++|..+...++.+|.   +++.|+++.   +.++.+|+++|++++++.+      .+|+++.++|+||
T Consensus       125 ---~Gd~Vlv~~P~y~~~~~~~~~~g~---~v~~v~~~~~~~~~~~~~d~~~l~~~~~~~~------k~v~l~~P~NPTG  192 (405)
T PRK06207        125 ---RGDKVAIVQPDYFANRKLVEFFEG---EMVPVQLDYLSADKRAGLDLDQLEEAFKAGV------RVFLFSNPNNPAG  192 (405)
T ss_pred             ---CCCEEEEeCCCchhHHHHHHHcCC---EEEEEeccccCcccCCCcCHHHHHHhhhhcC------eEEEECCCCCCCC
Confidence               678888899999999999999999   999999862   2357899999999986543      3788899999999


Q ss_pred             ccCC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCC--CCC-eeEEccCCcCCCC-CcceEEEeeCchhh
Q 037144          248 AVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE--CVD-SFSFNPHKWLFTT-LDCCCLWVKDPSCL  320 (502)
Q Consensus       248 ~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~--~aD-si~~~~hK~l~~p-~~~g~~~~r~~~~l  320 (502)
                      .+-+   +++|+++|++||+|+++|.+|+...+....... +..+.  .-. .++.+++|.++.| ..+|+++. ++...
T Consensus       193 ~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~-~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~-~~~l~  270 (405)
T PRK06207        193 VVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTH-LRALPIDPENVITIMGPSKTESLSGYRLGVAFG-SPAII  270 (405)
T ss_pred             cCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCc-hhcCCCCcCcEEEEecchhhccCcccceEEEEc-CHHHH
Confidence            9976   778889999999999999999765442211111 11111  112 4566799999844 55787764 33332


Q ss_pred             hhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 037144          321 LSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSDKR  398 (502)
Q Consensus       321 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~~  398 (502)
                      . .+.....+....                       ...+...++...+  +...+.+.++++.+.++.+.+.|+++++
T Consensus       271 ~-~~~~~~~~~~~~-----------------------~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~  326 (405)
T PRK06207        271 D-RMEKLQAIVSLR-----------------------AAGYSQAVLRTWFSEPDGWMKDRIARHQAIRDDLLRVLRGVEG  326 (405)
T ss_pred             H-HHHHHHhHhccC-----------------------CCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            2 221111111000                       0112222222223  3345677788888888999999988878


Q ss_pred             eEEecCCCeeEEE-EEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeEC--CEEEE
Q 037144          399 FEVAFPRNFSLVC-FRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVG--GIYVL  474 (502)
Q Consensus       399 ~~l~~~~~~~~v~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~l  474 (502)
                      +++. +|..++++ +++++...                         +  ...+.+.+. +.|..+.++..+.  +..++
T Consensus       327 ~~~~-~p~gg~fl~~~l~~~~~-------------------------~--~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~  378 (405)
T PRK06207        327 VFVR-APQAGSYLFPRLPRLAV-------------------------S--LHDFVKILRLQAGVIVTPGTEFSPHTADSI  378 (405)
T ss_pred             ceec-CCCeeEEEEEeCcccCC-------------------------C--HHHHHHHHHHhcCEEEeCchHhCCCCCCeE
Confidence            8765 45444444 44432110                         0  234666665 4576655544442  35799


Q ss_pred             EEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          475 RFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       475 R~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      |++++.   ++++++..++.|.++.++
T Consensus       379 Ris~~~---~~~~l~~al~rl~~~l~~  402 (405)
T PRK06207        379 RLNFSQ---DHAAAVAAAERIAQLIER  402 (405)
T ss_pred             EEEecC---CHHHHHHHHHHHHHHHHH
Confidence            999974   467899999999887664

>PLN02656 tyrosine transaminase

Probab=99.88  E-value=4.9e-20  Score=189.60  Aligned_cols=339  Identities=10%  Similarity=0.053  Sum_probs=220.1

Q ss_pred             CHHHHHHHHHHhhcCCC-CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHH
Q 037144           88 SVAGIVGEMLSSGFNVV-GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLK  166 (502)
Q Consensus        88 ~~~~~~~~~l~~~~n~~-~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~  166 (502)
                      .+|..+.+.+...+..+ ...|....+..++++.+.+++...+|..-..     ...++|+|+++++..++.+..+    
T Consensus        48 ~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~-----~~i~~t~G~~~al~~~~~~l~~----  118 (409)
T PLN02656         48 HTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSL-----DDVFITSGCTQAIDVALSMLAR----  118 (409)
T ss_pred             CCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCc-----ccEEEeCChHHHHHHHHHHHhC----
Confidence            34556666666655443 3467666777889999999999887764221     2689999999998777665533    


Q ss_pred             HhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccc
Q 037144          167 KIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAI  246 (502)
Q Consensus       167 ~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~  246 (502)
                             +++.|++++..|..+...+...|+   +++.+|+++++++.+|+++|++++++.+      .+|+++.++|+|
T Consensus       119 -------~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~i~~~~~~~~~~d~~~l~~~~~~~~------~~v~l~~P~NPt  182 (409)
T PLN02656        119 -------PGANILLPRPGFPIYELCAAFRHL---EVRYVDLLPEKGWEVDLDAVEALADQNT------VALVIINPGNPC  182 (409)
T ss_pred             -------CCCeEEEeCCCCCcHHHHHHHcCC---EEEEEeCCCcCCCCCCHHHHHHHhccCc------eEEEEECCCCCC
Confidence                   677888999999888888889999   9999999654457899999998886543      368888899999


Q ss_pred             ccc---CChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCC-Ce-eEEccCCcC-CCCCcceEEEeeCc---
Q 037144          247 TAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECV-DS-FSFNPHKWL-FTTLDCCCLWVKDP---  317 (502)
Q Consensus       247 G~i---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~a-Ds-i~~~~hK~l-~~p~~~g~~~~r~~---  317 (502)
                      |.+   +++++|+++|+++|+|+++|.+|+...+........ ..+... -. +..++.|.+ .....+|+++..++   
T Consensus       183 G~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~-~~~~~~~~vi~~~SfSK~f~~pGlRiG~~i~~~~~~~  261 (409)
T PLN02656        183 GNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPM-GVFGSIVPVLTLGSLSKRWIVPGWRLGWFVTTDPSGS  261 (409)
T ss_pred             CCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccH-HHhcccCcEEEEcccchhccCcceeEEEEEEeCcccc
Confidence            999   679999999999999999999998655422111111 111111 13 445699985 45577888887532   


Q ss_pred             ---hhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHH
Q 037144          318 ---SCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF---GVANLRNFIRSHVGMAKLFER  391 (502)
Q Consensus       318 ---~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---g~~g~~~~~~~~~~la~~l~~  391 (502)
                         ..+...+........                        ....+..+++...+   ....+++..++..+.++.+.+
T Consensus       262 ~~~~~~~~~~~~~~~~~~------------------------~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~  317 (409)
T PLN02656        262 FRDPKIVERIKKYFDILG------------------------GPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCD  317 (409)
T ss_pred             cccHHHHHHHHHHHhhhc------------------------CCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHH
Confidence               112222211000000                        00223333333333   234677788888888999999


Q ss_pred             HHhcCCCeEEecCCCeeEEEEEeecCc-chhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECC
Q 037144          392 LVTSDKRFEVAFPRNFSLVCFRVTPSA-VMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGG  470 (502)
Q Consensus       392 ~l~~~~~~~l~~~~~~~~v~f~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g  470 (502)
                      .|++++++....+|+.+++.|...+.. ..                   +..  +. ...+.+.+.+.|..+.++..++.
T Consensus       318 ~L~~~~~~~~~~~p~gg~~~w~~l~~~~~~-------------------~~~--~~-~~~~~~~l~~~gV~v~pg~~fg~  375 (409)
T PLN02656        318 RIKEIPCITCPHKPEGSMAVMVKLNLSLLE-------------------DIS--DD-IDFCFKLAREESVIILPGTAVGL  375 (409)
T ss_pred             HHhhCCCCcCCcCCCeEEEEEEecchhhcC-------------------CCC--CH-HHHHHHHHHhCCEEEecchhcCC
Confidence            998886654333566666554332210 00                   000  00 11223445556776665555555


Q ss_pred             EEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          471 IYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       471 ~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      ..++|++++.   +++++++.++.|+++...
T Consensus       376 ~~~iRi~~~~---~~e~l~eal~rl~~~~~~  403 (409)
T PLN02656        376 KNWLRITFAA---DPSSLEEALGRIKSFYLR  403 (409)
T ss_pred             CCeEEEEeCC---CHHHHHHHHHHHHHHHHH
Confidence            6799999973   567999999999887653

>PRK07682 hypothetical protein; Validated

Probab=99.88  E-value=1.6e-20  Score=191.49  Aligned_cols=328  Identities=12%  Similarity=0.097  Sum_probs=218.4

Q ss_pred             HHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccC
Q 037144           93 VGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGREN  172 (502)
Q Consensus        93 ~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~  172 (502)
                      +.+.+...+......|...++..++.+++.+|+.+.+|.+-..    ....++|+|+++|+..++.+..+          
T Consensus        38 ~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~----~~~i~~t~G~~~al~~~~~~l~~----------  103 (378)
T PRK07682         38 VREASIRSLEQGYTSYTANAGLLELRQEIAKYLKKRFAVSYDP----NDEIIVTVGASQALDVAMRAIIN----------  103 (378)
T ss_pred             HHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC----CCcEEEeCChHHHHHHHHHHhCC----------
Confidence            4444444443333456666778899999999999988874211    01589999999998776655433          


Q ss_pred             CCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC--
Q 037144          173 ISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD--  250 (502)
Q Consensus       173 ~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id--  250 (502)
                       +++.|+++..+|..+...++..|.   +++.++++.++++.+|+++|++++.+.+      .+|+++.++|+||.+-  
T Consensus       104 -~gd~vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~~~------~~v~~~~p~NPtG~~~s~  173 (378)
T PRK07682        104 -PGDEVLIVEPSFVSYAPLVTLAGG---VPVPVATTLENEFKVQPAQIEAAITAKT------KAILLCSPNNPTGAVLNK  173 (378)
T ss_pred             -CCCEEEEeCCCchhhHHHHHHcCC---EEEEeecCCccCCCCCHHHHHhhcCccc------EEEEEECCCCCcCcCcCH
Confidence             677888899999999999999998   8999998654457899999999886533      3677788999999984  


Q ss_pred             -ChhHHHHHHHHhCCEEEeecccccccccCccchhh--hcCCCCCCeeEEccCCcCCC-CCcceEEEeeCchhhhhhhcC
Q 037144          251 -PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF--IDGVECVDSFSFNPHKWLFT-TLDCCCLWVKDPSCLLSTLST  326 (502)
Q Consensus       251 -pl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~~-p~~~g~~~~r~~~~l~~~~~~  326 (502)
                       .+++|+++|++|++++++|.+|+.+.... .....  +.+...-..+..+++|.++. ...+|+++..+ ... +.+..
T Consensus       174 ~~~~~l~~~~~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~-~~i-~~l~~  250 (378)
T PRK07682        174 SELEEIAVIVEKHDLIVLSDEIYAELTYDE-AYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAPV-YFS-EAMLK  250 (378)
T ss_pred             HHHHHHHHHHHHcCcEEEEehhhhhcccCC-CCCChhhcccccCCEEEEecCcccccChhhhhhhhhcCH-HHH-HHHHH
Confidence             48899999999999999999998765421 11111  11222234667779999974 45588887643 322 22211


Q ss_pred             CcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC
Q 037144          327 NPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP  404 (502)
Q Consensus       327 ~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~  404 (502)
                      ...+...                       ....+...++.+.+  |...+++..+++.++++++.+.|+++ ++++. +
T Consensus       251 ~~~~~~~-----------------------~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~-~  305 (378)
T PRK07682        251 IHQYSMM-----------------------CAPTMAQFAALEALRAGNDDVIRMRDSYRKRRNFFVTSFNEI-GLTCH-V  305 (378)
T ss_pred             HHHhhcc-----------------------CCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHC-CCccC-C
Confidence            1111100                       00223333344443  44557778888899999999999987 77765 5


Q ss_pred             CCeeEEEEEee-cCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeEC--CEEEEEEEecC
Q 037144          405 RNFSLVCFRVT-PSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVG--GIYVLRFAAGN  480 (502)
Q Consensus       405 ~~~~~v~f~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lR~~~~~  480 (502)
                      |+.+++.|... +...                         +  ..++.+++. +.|..+.++..+.  +..++|++++.
T Consensus       306 p~g~~~~~~~~~~~~~-------------------------~--~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~~  358 (378)
T PRK07682        306 PGGAFYAFPSISSTGL-------------------------S--SEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYAT  358 (378)
T ss_pred             CCeeEEEEEeccCCCC-------------------------C--HHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeCC
Confidence            56666655432 2111                         0  234566654 4576555443332  35799999873


Q ss_pred             CCCcHHHHHHHHHHHHHHHHhC
Q 037144          481 SMTMESHVRAAWTVVQEHLEAF  502 (502)
Q Consensus       481 ~~t~~~di~~~~~~l~~~~~~~  502 (502)
                         ++++++++++.|+++.+++
T Consensus       359 ---~~~~l~~~l~~l~~~l~~~  377 (378)
T PRK07682        359 ---SLEQLQEAMKRMKRFVENK  377 (378)
T ss_pred             ---CHHHHHHHHHHHHHHHhhc
Confidence               4679999999999987653

>PLN00175 aminotransferase family protein; Provisional

Probab=99.88  E-value=4e-20  Score=190.29  Aligned_cols=329  Identities=12%  Similarity=0.104  Sum_probs=220.8

Q ss_pred             HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144           90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG  169 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~  169 (502)
                      |..+.+.+...+......|....+..++++.+.+++.+.+|.+-+.    ....++|+|+++++..++.+..+       
T Consensus        69 ~~~~~~~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~----~~~I~vt~G~~~al~~~~~~l~~-------  137 (413)
T PLN00175         69 PDFVKEAAIQAIRDGKNQYARGFGVPELNSAIAERFKKDTGLVVDP----EKEVTVTSGCTEAIAATILGLIN-------  137 (413)
T ss_pred             CHHHHHHHHHHHhcCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCCEEEeCCHHHHHHHHHHHhCC-------
Confidence            4556666666665444567777788899999999999988864221    01478899999998766654432       


Q ss_pred             ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144          170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV  249 (502)
Q Consensus       170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i  249 (502)
                          +++.|++.++.|..+...++..|+   +++.||++++ ++.+|+++|++++.+.+      .+|+++.++|+||.+
T Consensus       138 ----~gd~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~-~~~~~~~~l~~~~~~~~------k~i~i~~p~NPtG~~  203 (413)
T PLN00175        138 ----PGDEVILFAPFYDSYEATLSMAGA---KIKTVTLRPP-DFAVPEDELKAAFTSKT------RAILINTPHNPTGKM  203 (413)
T ss_pred             ----CCCEEEEeCCCchhHHHHHHHcCC---EEEEEECCcc-cCCCCHHHHHHhcCcCc------eEEEecCCCCCCCcC
Confidence                678888899999999999999999   9999999754 37999999999986543      377888999999998


Q ss_pred             C---ChhHHHHHHHHhCCEEEeecccccccccCccchhh--hcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhh
Q 037144          250 D---PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF--IDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLST  323 (502)
Q Consensus       250 d---pl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~  323 (502)
                      -   ++++|+++|++||+|+++|.+|....+.. .....  +.+...-..+..++.|.++ ....+|+++.. +.... .
T Consensus       204 ~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~-~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~v~~-~~l~~-~  280 (413)
T PLN00175        204 FTREELELIASLCKENDVLAFTDEVYDKLAFEG-DHISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAP-PHLTW-G  280 (413)
T ss_pred             CCHHHHHHHHHHHHHcCcEEEEecccCccccCC-cccChhhCCCCcCcEEEEecchhhccCcchheeeeEeC-HHHHH-H
Confidence            5   57889999999999999999997765421 11111  1121122355677999997 44567877764 33322 2


Q ss_pred             hcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 037144          324 LSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSDKRFEV  401 (502)
Q Consensus       324 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l  401 (502)
                      +.....+...                       ....+..+++.+.+  +...+++..+++.++++.+.+.|++. ++++
T Consensus       281 l~~~~~~~~~-----------------------~~s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~  336 (413)
T PLN00175        281 VRQAHSFLTF-----------------------ATATPMQWAAVAALRAPESYYEELKRDYSAKKDILVEGLKEV-GFKV  336 (413)
T ss_pred             HHHHHhhccC-----------------------CCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCee
Confidence            2111111100                       01222333334333  44567888888999999999999987 7886


Q ss_pred             ecCCCeeEEEE-EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh-cCcEEEEeeeEC-----CEEEE
Q 037144          402 AFPRNFSLVCF-RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV-SGKVFMTHAIVG-----GIYVL  474 (502)
Q Consensus       402 ~~~~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~-----g~~~l  474 (502)
                      . +|..+++.| ++.+.+.                      .    ...++.+.+.+ .|..+.++..+.     +..++
T Consensus       337 ~-~p~g~~f~~~~~~~~~~----------------------~----~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~i  389 (413)
T PLN00175        337 Y-PSSGTYFVMVDHTPFGF----------------------E----NDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLV  389 (413)
T ss_pred             c-CCCeeEEEEEeccccCC----------------------C----CHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEE
Confidence            5 455555444 3322110                      0    02356666654 477666554442     34689


Q ss_pred             EEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144          475 RFAAGNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       475 R~~~~~~~t~~~di~~~~~~l~~~~~  500 (502)
                      |++++.   +++++++.++.|.++.+
T Consensus       390 Rls~~~---~~e~l~~~~~rL~~~~~  412 (413)
T PLN00175        390 RFAFCK---DEETLRAAVERMKTKLK  412 (413)
T ss_pred             EEEEcC---CHHHHHHHHHHHHHHHh
Confidence            999973   57799999999988765

>PLN02822 serine palmitoyltransferase

Probab=99.88  E-value=1.5e-19  Score=188.53  Aligned_cols=334  Identities=10%  Similarity=0.056  Sum_probs=208.8

Q ss_pred             HHHHHHHHHhhcCCCCcccccCh---hhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHH
Q 037144           90 AGIVGEMLSSGFNVVGLDWISSP---AAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLK  166 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~~~~~~~~p---~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~  166 (502)
                      +..+.+.+...+...+.++..++   +......++.+.+++++|.++        ..++++|++ ++..++.+...    
T Consensus       125 ~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~~~~--------~i~~s~G~~-a~~sai~a~~~----  191 (481)
T PLN02822        125 NEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLGTPD--------SILYSYGLS-TIFSVIPAFCK----  191 (481)
T ss_pred             CHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhCCCC--------EEEECCHHH-HHHHHHHHhCC----
Confidence            34455555555544333333222   234556666677888888764        356666655 56555543322    


Q ss_pred             HhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhc---CCcc-EEEEEecC
Q 037144          167 KIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEA---ELIP-LFLCATVG  242 (502)
Q Consensus       167 ~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~---g~~p-~~Vv~t~g  242 (502)
                             ++++|++....|+++..++++.|.   +++.++.+       |.++|+..+++..+.   ...+ .+|++...
T Consensus       192 -------~gd~Ii~d~~~H~s~~~~~~ls~~---~~~~~~~n-------d~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i  254 (481)
T PLN02822        192 -------KGDIIVADEGVHWGIQNGLYLSRS---TIVYFKHN-------DMESLRNTLEKLTAENKRKKKLRRYIVVEAI  254 (481)
T ss_pred             -------CCCEEEEeCCccHHHHHHHHHcCC---eEEEECCC-------CHHHHHHHHHHHhhhhcccCCCcEEEEEecC
Confidence                   677888999999999999999988   89998865       556777776643322   1122 57888888


Q ss_pred             CccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhh--cCC--CCCCeeEEccCCcCCCCCcceEEEeeCch
Q 037144          243 TTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFI--DGV--ECVDSFSFNPHKWLFTTLDCCCLWVKDPS  318 (502)
Q Consensus       243 tt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~--~~~--~~aDsi~~~~hK~l~~p~~~g~~~~r~~~  318 (502)
                      .+++|.+-|+++|.++|++||+++++|.+|+.+.+ ....+...  .++  ...|.++.+++|.++++.  |+++. ++.
T Consensus       255 ~~~~G~i~~L~~i~~l~~k~~~~LIvDEa~s~gvl-G~~G~G~~e~~~v~~~~~dii~~s~sKalg~~G--G~i~g-~~~  330 (481)
T PLN02822        255 YQNSGQIAPLDEIVRLKEKYRFRVLLDESNSFGVL-GKSGRGLSEHFGVPIEKIDIITAAMGHALATEG--GFCTG-SAR  330 (481)
T ss_pred             CCCCCCccCHHHHHHHHHHcCCEEEEECCcccccc-CCCCCChHHHcCCCCCCCeEEEecchhhhhhCC--eEEEc-CHH
Confidence            88999999999999999999999999999974443 22122111  123  367899999999997443  55544 443


Q ss_pred             hhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 037144          319 CLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK  397 (502)
Q Consensus       319 ~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~  397 (502)
                      ...........|.+.                    .+.+ ..+.+...+++.+  +...++.+++.+++++|++.|++.+
T Consensus       331 ii~~~~~~~~~~~fs--------------------a~lPp~~~~Aa~~aL~~l--~~~~~~~~~l~~~~~~l~~~L~~~~  388 (481)
T PLN02822        331 VVDHQRLSSSGYVFS--------------------ASLPPYLASAAITAIDVL--EDNPSVLAKLKENIALLHKGLSDIP  388 (481)
T ss_pred             HHHHHHhcCCceeec--------------------cccCHHHHHHHHHHHHHH--HhCHHHHHHHHHHHHHHHHHHHhcC
Confidence            332211122222221                    1111 0112222344332  2235788899999999999999988


Q ss_pred             CeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEee---eEC---C
Q 037144          398 RFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHA---IVG---G  470 (502)
Q Consensus       398 ~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~---~~~---g  470 (502)
                      |+++..++..+++.+.+.....                    ..+.......++.++|. ++|.+ +.+.   .+.   .
T Consensus       389 g~~~~~~~~spi~~l~l~~~~~--------------------~~~~~~~~~~~~~~~Ll~e~GV~-v~~~~~~~~~~~~~  447 (481)
T PLN02822        389 GLSIGSNTLSPIVFLHLEKSTG--------------------SAKEDLSLLEHIADRMLKEDSVL-VVVSKRSTLDKCRL  447 (481)
T ss_pred             CcccCCCCCCCEEEEEeCCCcc--------------------cccchHHHHHHHHHHHHhcCCEE-EEeeCCCCcCCCCC
Confidence            8888766667777777743100                    00001233467788887 56764 4432   221   2


Q ss_pred             EEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          471 IYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       471 ~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      ...+|++++.. .+++||+++++.|++++.+
T Consensus       448 ~~~lRi~is~~-~t~edI~~~~~~l~~~~~~  477 (481)
T PLN02822        448 PVGIRLFVSAG-HTESDILKASESLKRVAAS  477 (481)
T ss_pred             CCcEEEEECCC-CCHHHHHHHHHHHHHHHHH
Confidence            34799998644 4667999999999988764

>PLN02187 rooty/superroot1

Probab=99.88  E-value=1.2e-19  Score=188.90  Aligned_cols=340  Identities=10%  Similarity=0.054  Sum_probs=217.8

Q ss_pred             HHHHHHHHHHhhcCCC-CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHH
Q 037144           89 VAGIVGEMLSSGFNVV-GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKK  167 (502)
Q Consensus        89 ~~~~~~~~l~~~~n~~-~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~  167 (502)
                      +|..+.+.+...+... ...|....+..++.+.+.+|+.+.+|.+-+.     ...++|+|+++++..++.+..+     
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~-----~~I~it~G~~~al~~~~~~l~~-----  153 (462)
T PLN02187         84 TCIEAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTP-----EDIFLTAGCNQGIEIVFESLAR-----  153 (462)
T ss_pred             CCHHHHHHHHHHHhCCCCCCCCCCCChHHHHHHHHHHHHHhcCCCCCc-----ccEEEeCCHHHHHHHHHHHhcC-----
Confidence            3444555555544332 3456666777889999999998877753221     2689999999998777665543     


Q ss_pred             hCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccc
Q 037144          168 IGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAIT  247 (502)
Q Consensus       168 ~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G  247 (502)
                            +++.|+++.++++.+...++..|+   +++.+++.+++++.+|+++|++++++.+      .+|+++.++|+||
T Consensus       154 ------pGd~Vlv~~P~y~~y~~~~~~~g~---~~~~~~l~~~~~~~~d~~~l~~~~~~~~------~~v~i~nP~NPTG  218 (462)
T PLN02187        154 ------PNANILLPRPGFPHYDARAAYSGL---EVRKFDLLPEKEWEIDLEGIEAIADENT------VAMVVINPNNPCG  218 (462)
T ss_pred             ------CCCEEEEeCCCCccHHHHHHHcCC---EEEEEeCccccCCccCHHHHHHhcCCCc------EEEEEeCCCCCCC
Confidence                  678889999999988888999999   9999998654468999999998875433      3788888999999


Q ss_pred             ccCC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCC-CCCeeE-EccCCcCC-CCCcceEEEeeCchhhh
Q 037144          248 AVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE-CVDSFS-FNPHKWLF-TTLDCCCLWVKDPSCLL  321 (502)
Q Consensus       248 ~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~-~aDsi~-~~~hK~l~-~p~~~g~~~~r~~~~l~  321 (502)
                      .+-+   +++|+++|++||+|+++|.+|+...+..+.+... ..+. ...+++ .++.|.++ ....+|+++..++....
T Consensus       219 ~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~-~~~~~~~~vi~l~SfSK~f~~pGlRiG~~v~~~p~~~~  297 (462)
T PLN02187        219 NVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSM-GKFASIVPVLTLAGISKGWVVPGWKIGWIALNDPEGVF  297 (462)
T ss_pred             CccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeH-HHhccCCcEEEEecchhhcCCccceeEEEEecCchhHH
Confidence            9865   8889999999999999999997755422111111 1111 122444 56999965 45668888875442111


Q ss_pred             ---hhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhc
Q 037144          322 ---STLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF---GVANLRNFIRSHVGMAKLFERLVTS  395 (502)
Q Consensus       322 ---~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---g~~g~~~~~~~~~~la~~l~~~l~~  395 (502)
                         ..+.....+..-                   ..  ....+..+++...+   ..+.+++..+.+.+.++++.+.|++
T Consensus       298 ~~~~~~~~~~~~~~~-------------------~~--~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~  356 (462)
T PLN02187        298 ETTKVLQSIKQNLDV-------------------TP--DPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKD  356 (462)
T ss_pred             HHHHHHHHHHHhccc-------------------cC--CCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhh
Confidence               111111011000                   00  00123333333333   3466788888889999999999998


Q ss_pred             CCCeEEecCCCeeEEEEE-eecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHH-HHHhcCcEEEEeeeECCEEE
Q 037144          396 DKRFEVAFPRNFSLVCFR-VTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLE-SINVSGKVFMTHAIVGGIYV  473 (502)
Q Consensus       396 ~~~~~l~~~~~~~~v~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~l~~~g~~~~~~~~~~g~~~  473 (502)
                      ++++..+..|..+++.|. +......                   ...  +  ..+++. .+.++|.++.++..++...+
T Consensus       357 ~~~~~~~~~P~gg~fl~~~l~~~~~~-------------------~~~--~--~~~~~~~ll~~~gV~v~pG~~fg~~~~  413 (462)
T PLN02187        357 IPCVVCPKKPESCTYLLTKLELSLMD-------------------NIK--D--DIDFCVKLAREENLVFLPGDALGLKNW  413 (462)
T ss_pred             CCCCcCCCCCCEeEEEEeecChhhCC-------------------CCC--C--HHHHHHHHHhhCCEEEECccccCCCCe
Confidence            865543334555454443 3211000                   000  0  123333 33556766665555555689


Q ss_pred             EEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          474 LRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       474 lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      +|++++.   .++.++.+++.|.+++++
T Consensus       414 iRis~~~---~~e~l~~al~rL~~~l~~  438 (462)
T PLN02187        414 MRITIGV---EAHMLEDALERLKGFCTR  438 (462)
T ss_pred             EEEEeCC---CHHHHHHHHHHHHHHHHH
Confidence            9999973   577899999998887654

>PTZ00433 tyrosine aminotransferase; Provisional

Probab=99.88  E-value=8e-20  Score=188.32  Aligned_cols=341  Identities=12%  Similarity=0.068  Sum_probs=218.1

Q ss_pred             HHHHHHHHHHhhcCCC-CcccccChhhHHHHHHHHHHHHHhcCCCCccC-cCCCCcEEEcCCchHHHHHHHHHHHHHHHH
Q 037144           89 VAGIVGEMLSSGFNVV-GLDWISSPAAVELENIVMDWLGQMLDLPKSFL-FSGNGGGVIQGTTCEALLCTLTAARDRVLK  166 (502)
Q Consensus        89 ~~~~~~~~l~~~~n~~-~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~-~~~~~~g~~t~ggt~a~~~al~~a~~~~~~  166 (502)
                      ++..+.+.+...++.. ...|....+..++.+.+.+|+.+.++.++... .......++|+|+++++..++.+...    
T Consensus        51 p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~----  126 (412)
T PTZ00433         51 TPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKDNVVLCSGVSHAILMALTALCD----  126 (412)
T ss_pred             CCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCChhhEEEeCChHHHHHHHHHHhcC----
Confidence            5666777777666543 34566555678899999999988765110000 00012689999999998877765543    


Q ss_pred             HhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccc
Q 037144          167 KIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAI  246 (502)
Q Consensus       167 ~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~  246 (502)
                             +++.|+++.++|..+...++..|+   +++.+|++.+.++.+|+++|++++++.+      .+|+++.++|+|
T Consensus       127 -------~gd~vlv~~P~y~~~~~~~~~~g~---~~~~i~~~~~~~~~~d~~~l~~~~~~~~------~~i~~~~p~NPt  190 (412)
T PTZ00433        127 -------EGDNILVPAPGFPHYETVCKAYGI---EMRFYNCRPEKDWEADLDEIRRLVDDRT------KALIMTNPSNPC  190 (412)
T ss_pred             -------CCCEEEEccCCcccHHHHHHHcCC---EEEEEecCccccCcCCHHHHHHHhccCc------eEEEEeCCCCCC
Confidence                   677888999999999999999999   9999999765567999999998886533      367888999999


Q ss_pred             ccc---CChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCC-CCC-eeEEccCCcC-CCCCcceEEEeeCch--
Q 037144          247 TAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE-CVD-SFSFNPHKWL-FTTLDCCCLWVKDPS--  318 (502)
Q Consensus       247 G~i---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~-~aD-si~~~~hK~l-~~p~~~g~~~~r~~~--  318 (502)
                      |.+   +++++|+++|+++|+++++|.+|..+......+.. +..+. ..+ .++.++.|.+ .....+|+++..++.  
T Consensus       191 G~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~-~~~~~~~~~~i~~~SfSK~~~~pGlRlG~~i~~~p~~~  269 (412)
T PTZ00433        191 GSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTS-VADFDTTVPRVILGGTAKNLVVPGWRLGWLLLVDPHGN  269 (412)
T ss_pred             CcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccc-hhhccCCCceEEEccchhhcCCCCeeEEEEEEeCCccc
Confidence            986   45888899999999999999999765432111111 11111 112 4456799998 456778988863321  


Q ss_pred             --hhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--c-HHHHHHHHHHHHHHHHHHHHHH
Q 037144          319 --CLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--G-VANLRNFIRSHVGMAKLFERLV  393 (502)
Q Consensus       319 --~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g-~~g~~~~~~~~~~la~~l~~~l  393 (502)
                        .+.+.+.... +...                       ....+...++...+  + ...+++..+++.+.++.+.+.|
T Consensus       270 ~~~~~~~~~~~~-~~~~-----------------------~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L  325 (412)
T PTZ00433        270 GGDFLDGMKRLG-MLVC-----------------------GPCSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLYNHI  325 (412)
T ss_pred             HHHHHHHHHHHh-hccC-----------------------CCChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHH
Confidence              1111111100 0000                       00122222222222  1 3556777778888899999999


Q ss_pred             hcCCCeEEecCCCeeEE-EEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh-cCcEEEEeeeECCE
Q 037144          394 TSDKRFEVAFPRNFSLV-CFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV-SGKVFMTHAIVGGI  471 (502)
Q Consensus       394 ~~~~~~~l~~~~~~~~v-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~g~  471 (502)
                      ++..++.+. +|+.+++ .++++.....                   +.    ....++.+.+.+ .|..+.++..+...
T Consensus       326 ~~~~~~~~~-~p~gg~f~~~~l~~~~~~-------------------~~----~~~~~~~~~ll~~~gV~v~pg~~f~~~  381 (412)
T PTZ00433        326 GECIGLSPT-MPRGSMFLMSRLDLEKFR-------------------DI----KSDVEFYEKLLEEENVQVLPGEIFHMP  381 (412)
T ss_pred             hcCCCCccc-CCCeeEEEEEEechhhcC-------------------CC----CCHHHHHHHHHHhcCEEEeCccccCCC
Confidence            887677654 4554444 4444321000                   00    002356677764 57665555445446


Q ss_pred             EEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          472 YVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       472 ~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      .++|++++.   .+++++++++.|.++.+.
T Consensus       382 ~~iRis~~~---~~e~l~~al~~l~~~~~~  408 (412)
T PTZ00433        382 GFTRLTISR---PVEVLREAVERIKAFCER  408 (412)
T ss_pred             CeEEEEecC---CHHHHHHHHHHHHHHHHH
Confidence            799999963   467899999999887654

>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]

Probab=99.88  E-value=6.2e-20  Score=175.91  Aligned_cols=335  Identities=13%  Similarity=0.066  Sum_probs=233.9

Q ss_pred             CHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHH
Q 037144           88 SVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKK  167 (502)
Q Consensus        88 ~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~  167 (502)
                      ..|..+.+.+...++...++|...  ..++-+.+.+|.++.+++....     ...++++|    .+.++..+.+.+.+ 
T Consensus        38 ~~pp~i~~Al~~rvdhGvfGY~~~--~~~~~~ai~~w~~~r~~~~i~~-----e~i~~~p~----VVpgi~~~I~~~T~-  105 (388)
T COG1168          38 PTPPEIIEALRERVDHGVFGYPYG--SDELYAAIAHWFKQRHQWEIKP-----EWIVFVPG----VVPGISLAIRALTK-  105 (388)
T ss_pred             CCCHHHHHHHHHHHhcCCCCCCCC--CHHHHHHHHHHHHHhcCCCCCc-----ceEEEcCc----chHhHHHHHHHhCc-
Confidence            445667888888888877777633  3568889999999999985432     24677777    45555655555433 


Q ss_pred             hCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecC-CCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccc
Q 037144          168 IGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTT-KSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAI  246 (502)
Q Consensus       168 ~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~-~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~  246 (502)
                            +++.|++..+.++.+.++....|-   +++..|+. .++.|.||.++||+++.+..     +.+.+++.|+|++
T Consensus       106 ------~gd~Vvi~tPvY~PF~~~i~~n~R---~~i~~pL~~~~~~y~iD~~~LE~~~~~~~-----vkl~iLCnPHNP~  171 (388)
T COG1168         106 ------PGDGVVIQTPVYPPFYNAIKLNGR---KVIENPLVEDDGRYEIDFDALEKAFVDER-----VKLFILCNPHNPT  171 (388)
T ss_pred             ------CCCeeEecCCCchHHHHHHhhcCc---EEEeccccccCCcEEecHHHHHHHHhcCC-----ccEEEEeCCCCCC
Confidence                  667777778899999999999998   99999986 34568999999999998754     2388999999999


Q ss_pred             ccc---CChhHHHHHHHHhCCEEEeecccccccccCccchhhh-cCCCCCC-eeE-EccCCcCCCC-CcceEEEeeCchh
Q 037144          247 TAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFI-DGVECVD-SFS-FNPHKWLFTT-LDCCCLWVKDPSC  319 (502)
Q Consensus       247 G~i---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~-~~~~~aD-si~-~~~hK~l~~p-~~~g~~~~r~~~~  319 (502)
                      |.+   +.|.+|+++|++||+.++.|..|+-..+....+-... -+...+| +++ .++.|+++.+ ..|+.+++.++..
T Consensus       172 Grvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~l  251 (388)
T COG1168         172 GRVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNREL  251 (388)
T ss_pred             CccccHHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHHH
Confidence            998   7899999999999999999999977665442221111 0111233 555 4579999844 5677788877654


Q ss_pred             hhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchH--HHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc-C
Q 037144          320 LLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLK--LWVVIRNFGVANLRNFIRSHVGMAKLFERLVTS-D  396 (502)
Q Consensus       320 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~--~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~-~  396 (502)
                      .. .+...-......                      ...++.  ++.+.-..|.+++.++++....+.+++.+.+.+ +
T Consensus       252 r~-~~~~~l~~~~~~----------------------~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~~  308 (388)
T COG1168         252 RA-KFLKRLKRNGLH----------------------GPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKHL  308 (388)
T ss_pred             HH-HHHHHHHHhcCC----------------------CCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence            22 221110111110                      013333  333444459999999999999999999999976 6


Q ss_pred             CCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeE---CCEEE
Q 037144          397 KRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIV---GGIYV  473 (502)
Q Consensus       397 ~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~---~g~~~  473 (502)
                      |++++..|..+.+....+.+-++.                           ..++.+.+.+++++.++.+..   .|.++
T Consensus       309 P~v~v~~p~gTYL~WLD~r~l~l~---------------------------d~~l~~~ll~~akVal~~G~~FG~~g~gf  361 (388)
T COG1168         309 PGVKVTEPQGTYLAWLDCRELGLD---------------------------DSELAEFLLEEAKVALSPGSTFGEEGSGF  361 (388)
T ss_pred             CCcEEecCCCceeeeeeccccCCC---------------------------hHHHHHHHHHhhcEeccCCCccCcCCCce
Confidence            999998555555555555543321                           135667777778887776653   35789


Q ss_pred             EEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          474 LRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       474 lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      +|+.+.   ++.+-++++++.|.+..+.
T Consensus       362 ~RlN~a---cpr~~L~eal~ri~~al~~  386 (388)
T COG1168         362 VRLNFA---CPRAILEEALERLKRALKK  386 (388)
T ss_pred             EEEecC---CCHHHHHHHHHHHHHHHhc
Confidence            999765   6777788888888766543

>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT)

Probab=99.88  E-value=1.1e-20  Score=194.45  Aligned_cols=342  Identities=12%  Similarity=0.061  Sum_probs=207.4

Q ss_pred             cccccCCCCCCHHHHHHHHHHhhc-CC------CCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCch
Q 037144           78 NYFAYFPATSSVAGIVGEMLSSGF-NV------VGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTC  150 (502)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~l~~~~-n~------~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt  150 (502)
                      +++...++...++..+.+.+...+ ..      ....|...+....+|+.+.+++++++|.+..        .++++|||
T Consensus        20 ~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~--------~v~~~sgt   91 (402)
T cd00378          20 ETLELIASENFTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAEYA--------NVQPHSGS   91 (402)
T ss_pred             hCeeeeccCCcCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCCce--------eeecCCcH
Confidence            355555555444444555554433 11      1223445556678888888999999998743        34445678


Q ss_pred             HHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHH-----HHHcCCCCCCEEEEecCCC-CCcccCHHHHHHHH
Q 037144          151 EALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKA-----AQIVGIDRKNIRAIKTTKS-SSYGLSAESVLSQI  224 (502)
Q Consensus       151 ~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a-----a~~~Glg~~~v~~v~~~~~-~~~~~d~~~Le~~i  224 (502)
                      +|+..++.+...           +++.|+++...|.+....     ++..|.   +++.++++.+ +++.+|+++|++++
T Consensus        92 ~a~~~~l~~l~~-----------~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~id~~~l~~~i  157 (402)
T cd00378          92 QANLAVYFALLE-----------PGDTIMGLDLSHGGHLTHGSFTKVSASGK---LFESVPYGVDPETGLIDYDALEKMA  157 (402)
T ss_pred             HHHHHHHHHhcC-----------CCCEEEEecCccCccccccccccccccce---eEEEecCCcCcccCCcCHHHHHHHH
Confidence            998877766532           677888888887644222     556677   7778877643 15799999999998


Q ss_pred             HHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCC
Q 037144          225 NLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLF  304 (502)
Q Consensus       225 ~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~  304 (502)
                      .+..     +.+|+++.+.  +|...|+++|+++|++||+++++|++|..+..........   +..+|+++.++|||+.
T Consensus       158 ~~~~-----~~~v~~~~~~--~~~~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~---~~~~dv~~~s~sK~l~  227 (402)
T cd00378         158 LEFK-----PKLIVAGASA--YPRPIDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNP---LPGADVVTTTTHKTLR  227 (402)
T ss_pred             HhCC-----CCEEEecCcc--cCCCcCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCc---ccCCcEEEeccccCCC
Confidence            6421     3356655543  4677899999999999999999999975544321111111   1257899999999996


Q ss_pred             CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHH
Q 037144          305 TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVG  384 (502)
Q Consensus       305 ~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~  384 (502)
                      +|. .|+++..++............+....                    +.......+..++......++.++.++..+
T Consensus       228 G~~-gg~i~~~~~~~~~~l~~~~~~~~~~~--------------------~~~~~~~a~~~al~~~~~~~~~~~~~~~~~  286 (402)
T cd00378         228 GPR-GGLILTRKGELAKKINSAVFPGLQGG--------------------PHLHVIAAKAVALKEALEPEFKAYAKQVVE  286 (402)
T ss_pred             CCC-ceEEEeccHHHHHHHHHHhCccccCC--------------------chHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            665 45555554333322211111111100                    000011122233333323356778888999


Q ss_pred             HHHHHHHHHhcCCCeEEec-CCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEE
Q 037144          385 MAKLFERLVTSDKRFEVAF-PRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFM  463 (502)
Q Consensus       385 la~~l~~~l~~~~~~~l~~-~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~  463 (502)
                      +++++.+.|.+. |++++. +...+++++.+.+.+.                         +  ...+.+.+.+.|..+.
T Consensus       287 ~~~~l~~~L~~~-g~~~~~~~~~~~~v~v~~~~~~~-------------------------~--~~~~~~~l~~~gI~v~  338 (402)
T cd00378         287 NAKALAEALKER-GFKVVSGGTDNHLVLVDLRPKGI-------------------------T--GKAAEDALEEAGITVN  338 (402)
T ss_pred             HHHHHHHHHHhC-CCeEeecCCCCeEEEEeCCccCC-------------------------C--HHHHHHHHHHcCcEEc
Confidence            999999999987 888864 3345566666543211                         0  1234445555676432


Q ss_pred             E---eeeE---CCEEEEEEEecCCC---CcHHHHHHHHHHHHHHHH
Q 037144          464 T---HAIV---GGIYVLRFAAGNSM---TMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       464 ~---~~~~---~g~~~lR~~~~~~~---t~~~di~~~~~~l~~~~~  500 (502)
                      .   +...   .+...+|++++...   .+++||+++++.|+++.+
T Consensus       339 ~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~~  384 (402)
T cd00378         339 KNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARALK  384 (402)
T ss_pred             CCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHHh
Confidence            1   1111   13458999875431   257899999999998754

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.

>PTZ00377 alanine aminotransferase; Provisional

Probab=99.88  E-value=1.6e-19  Score=189.47  Aligned_cols=333  Identities=13%  Similarity=0.099  Sum_probs=213.4

Q ss_pred             CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCC
Q 037144          105 GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQT  184 (502)
Q Consensus       105 ~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~  184 (502)
                      ...|....+..++.+.+.+|+.+..|.+-+.     ..+++|+|+++++..++.+....          +++.|++..+.
T Consensus       108 ~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~-----~~I~it~Ga~~al~~~~~~l~~~----------~gD~Vlv~~P~  172 (481)
T PTZ00377        108 TGAYTDSAGYPFVRKAVAAFIERRDGVPKDP-----SDIFLTDGASSGIKLLLQLLIGD----------PSDGVMIPIPQ  172 (481)
T ss_pred             ccCcCcccCCHHHHHHHHHHHHHhcCCCCCh-----hhEEEcCCHHHHHHHHHHHhccC----------CCCEEEECCCC
Confidence            3457777788999999999999888865321     26899999999998777665411          67889999999


Q ss_pred             chhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hhHHHHHHHH
Q 037144          185 HCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LKPLCDVAKQ  261 (502)
Q Consensus       185 H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~eI~~i~~~  261 (502)
                      |..+...++..|.   +++.||+++++++.+|+++|++++++..+++.++.+|+++.++|+||.+-+   +++|+++|++
T Consensus       173 y~~y~~~~~~~g~---~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~  249 (481)
T PTZ00377        173 YPLYSAAITLLGG---KQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYE  249 (481)
T ss_pred             chhHHHHHHHcCC---EEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHH
Confidence            9999999999999   999999986556899999999999865444445667777789999999976   8899999999


Q ss_pred             hCCEEEeecccccccccC-ccc---hhhhcCCCC-----CCeeE-EccCCcC-C-CCCcceEEEee--CchhhhhhhcCC
Q 037144          262 FGIWVHVDAAYAGSACIC-PEF---RHFIDGVEC-----VDSFS-FNPHKWL-F-TTLDCCCLWVK--DPSCLLSTLSTN  327 (502)
Q Consensus       262 ~g~~lhVDaA~g~~~~~~-~~~---~~~~~~~~~-----aDsi~-~~~hK~l-~-~p~~~g~~~~r--~~~~l~~~~~~~  327 (502)
                      ||+|+++|.+|+...+.. ..+   .....++..     ...++ .++.|.+ + ....+|++++.  ++..........
T Consensus       250 ~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~li~~l~~~~  329 (481)
T PTZ00377        250 KGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEVREQIYKLA  329 (481)
T ss_pred             CCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHHHHHHHHHHh
Confidence            999999999997654311 111   111111111     12444 4689975 3 56778988762  443322221111


Q ss_pred             cccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh-----cH-------HHHHHHHHHHHHHHHHHHHHHhc
Q 037144          328 PQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF-----GV-------ANLRNFIRSHVGMAKLFERLVTS  395 (502)
Q Consensus       328 ~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-----g~-------~g~~~~~~~~~~la~~l~~~l~~  395 (502)
                      ..++.                         ...+...++...+     +.       +..++..+++.+.++.+.+.|++
T Consensus       330 ~~~~~-------------------------~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~  384 (481)
T PTZ00377        330 SINLC-------------------------SNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNK  384 (481)
T ss_pred             heecC-------------------------CChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            01100                         0122223333322     11       11223333457778889999999


Q ss_pred             CCCeEEecCCCeeEEEEE-ee-cCcchhhhhhcccCCCcccccccchhHhhHHHHHHH-HHHHHhcCcEEEEeeeEC---
Q 037144          396 DKRFEVAFPRNFSLVCFR-VT-PSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNREL-LESINVSGKVFMTHAIVG---  469 (502)
Q Consensus       396 ~~~~~l~~~~~~~~v~f~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~l~~~g~~~~~~~~~~---  469 (502)
                      ++++++. +|+.+++.|. +. +.......                ....... ...+ ...+.+.|..++++..+.   
T Consensus       385 ~~g~~~~-~p~gg~fl~~~~~l~~~~~~~~----------------~~~~~~~-~~~~~~~ll~~~gV~v~pG~~F~~~~  446 (481)
T PTZ00377        385 IEGVSCQ-PVEGAMYAFPRIELPEKAIQEA----------------KERGLAP-DVLYCLELLESTGIVVVPGSGFGQKP  446 (481)
T ss_pred             CCCcEee-cCCeeEEEEeeccCchhhHHHH----------------HhcCCCc-HHHHHHHHHHHcCEEEeCCcccCCCC
Confidence            8888876 5666666653 32 11100000                0000000 1122 334445677666655554   


Q ss_pred             CEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          470 GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       470 g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      +..++|++++   +++++++++++.|.++.++
T Consensus       447 ~~~~~Rls~~---~~~e~l~~~l~rl~~~~~~  475 (481)
T PTZ00377        447 GTYHFRITIL---PPEEQIEEMVKKIKEFHES  475 (481)
T ss_pred             CCCEEEEEEC---CCHHHHHHHHHHHHHHHHH
Confidence            3468999986   4677899999999887654

>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional

Probab=99.88  E-value=2.6e-21  Score=194.87  Aligned_cols=337  Identities=12%  Similarity=0.007  Sum_probs=214.8

Q ss_pred             cCCCCCCHHHHHHHHHHhhc----CCCCccc---ccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEc-CCchHHH
Q 037144           82 YFPATSSVAGIVGEMLSSGF----NVVGLDW---ISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQ-GTTCEAL  153 (502)
Q Consensus        82 ~~~~~~~~~~~~~~~l~~~~----n~~~~~~---~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t-~ggt~a~  153 (502)
                      +.+++...|..+.+.+...+    +...+.+   .-++.+.++-+++.+.+++++|.++..      ..+++ ++||.++
T Consensus         7 ~~pGP~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~------~v~~~~gsgt~~~   80 (360)
T PRK05355          7 FSAGPAMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDNY------KVLFLQGGASLQF   80 (360)
T ss_pred             ccCCCCCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCc------EEEEEcCCchHHH
Confidence            44666666666655555443    2222222   244566688999999999999985432      45555 5555555


Q ss_pred             HHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHH-HHHHHHhcCC
Q 037144          154 LCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLS-QINLDVEAEL  232 (502)
Q Consensus       154 ~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~-~i~~~~~~g~  232 (502)
                      -.+++....        .+.+.++|..+..+|.. .+.++.+|.   . ..++.++. .+..+..++++ +|+++     
T Consensus        81 Ea~~~nl~~--------~g~~~l~i~~G~fg~r~-~~~a~~~g~---~-~~~~~~~~-~g~~~~~~~~~~~l~~~-----  141 (360)
T PRK05355         81 AMVPMNLLG--------GGKKADYVDTGSWSKKA-IKEAKKYGE---V-NVAASSED-DGFTYIPPLDEWQLSDD-----  141 (360)
T ss_pred             HHHHHhcCC--------CCCeEEEEECCHHHHHH-HHHHHHhCC---c-eEEecccc-cCCCCCCChhhccCCCC-----
Confidence            444333222        11134555555555544 667788887   5 66665531 23555555555 56443     


Q ss_pred             ccEEEEEecCCccccccC-ChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceE
Q 037144          233 IPLFLCATVGTTAITAVD-PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCC  311 (502)
Q Consensus       233 ~p~~Vv~t~gtt~~G~id-pl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~  311 (502)
                       +.+|.+++..|+||.+. ||++|      +|++++||++++.+..+++-.        ..|++++++||+++ |.|.|+
T Consensus       142 -~~~V~~th~eTstGv~~~~i~~i------~g~l~vVDavss~g~~~idv~--------~~d~~~~ssqK~lg-P~Glg~  205 (360)
T PRK05355        142 -AAYVHYTSNETIDGTEFHELPDT------GDVPLVADMSSDILSRPIDVS--------KFGLIYAGAQKNIG-PAGLTI  205 (360)
T ss_pred             -CCEEEEccCCCcceEecCccccc------CCCcEEEEcCccccCccCCHH--------HccEEEEecccccc-CCceEE
Confidence             34899999999999997 88877      899999999998888776532        45799999999986 999999


Q ss_pred             EEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCC-CCchHHHHHHHHhcHH-HHHHHHHHHHHHHHHH
Q 037144          312 LWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRR-FRSLKLWVVIRNFGVA-NLRNFIRSHVGMAKLF  389 (502)
Q Consensus       312 ~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~g~~-g~~~~~~~~~~la~~l  389 (502)
                      ++++++..- ..-...+.|+......        . ...+. ++-. ....++..+++.+-.+ |++++.+++.++++++
T Consensus       206 l~~s~~~l~-~~~~~~~~~~~~~~~~--------~-~~~~~-~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l  274 (360)
T PRK05355        206 VIVREDLLG-RALPSIPSMLDYKTHA--------D-NDSMY-NTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALL  274 (360)
T ss_pred             EEECHHHHh-hcccCCChHHHHHHHH--------h-cCCcc-CCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Confidence            999876542 1111112222211000        0 00011 1111 1335777888888778 8999999999999999


Q ss_pred             HHHHhcCCCeEEecC--CCe-eEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEee
Q 037144          390 ERLVTSDKRFEVAFP--RNF-SLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHA  466 (502)
Q Consensus       390 ~~~l~~~~~~~l~~~--~~~-~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~  466 (502)
                      ++.|++++.+..+.+  ..+ .+++|.++..                            ....++.+.+.++|.++ ...
T Consensus       275 ~~~l~~~~~~~~~~~~~~rs~~v~sf~~~~~----------------------------~~~~~~~~~~~~~Gi~~-~~~  325 (360)
T PRK05355        275 YDAIDSSDFYRNPVAPEDRSRMNVPFTLADE----------------------------ELDKKFLAEAKAAGLVG-LKG  325 (360)
T ss_pred             HHHHHhCCCcccCCChhhcCCcEEEEEcCCh----------------------------HHHHHHHHHHHHCCCcc-cCC
Confidence            999999964334322  234 4678876431                            11245666777788864 322


Q ss_pred             eECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          467 IVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       467 ~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      . ...+.+|+|+.++ ++++||++++++|+++.+.
T Consensus       326 ~-~~~g~vRiS~~~~-nt~eei~~l~~~l~~~~~~  358 (360)
T PRK05355        326 H-RSVGGMRASIYNA-MPLEGVQALVDFMKEFERR  358 (360)
T ss_pred             C-CccCcEEEECCCC-CCHHHHHHHHHHHHHHHHh
Confidence            2 2246899998654 6677999999999998753

>PRK05937 8-amino-7-oxononanoate synthase; Provisional

Probab=99.88  E-value=7.2e-20  Score=185.94  Aligned_cols=336  Identities=13%  Similarity=0.077  Sum_probs=203.0

Q ss_pred             CCCCCCcccccCCCCCCHHHHHHHHHHhhcCCC---CcccccCh---hhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEE
Q 037144           72 THWQSPNYFAYFPATSSVAGIVGEMLSSGFNVV---GLDWISSP---AAVELENIVMDWLGQMLDLPKSFLFSGNGGGVI  145 (502)
Q Consensus        72 ~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~---~~~~~~~p---~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~  145 (502)
                      .+|.+-.|+|+-..++..+. +.+.+..+..+.   +.+...++   +...+-.++.+.+++++|.+.         .++
T Consensus         7 ~~~~s~~YL~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~~---------~l~   76 (370)
T PRK05937          7 IDFVTNDFLGFSRSDTLVHE-VEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAPE---------AFI   76 (370)
T ss_pred             EEeECCCccCCCCCHHHHHH-HHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCCe---------EEE
Confidence            45777889998765443333 444444443221   12222222   245667778888999999864         355


Q ss_pred             cCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHH
Q 037144          146 QGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQIN  225 (502)
Q Consensus       146 t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~  225 (502)
                      .++|+.+|+ ++..+...          +++.|+++...|.|+..+++.+.-   ..+.++       ..|+++|+++|+
T Consensus        77 ~~sG~~a~~-~~~~~~~~----------~~d~ii~d~~~H~sv~~~~~~~~~---~~~~~~-------~~d~~~l~~~l~  135 (370)
T PRK05937         77 VPSGYMANL-GLCAHLSS----------VTDYVLWDEQVHISVVYSLSVISG---WHQSFR-------HNDLDHLESLLE  135 (370)
T ss_pred             ECChHHHHH-HHHHHhCC----------CCCEEEEEhhhhHHHHHHHHHcCC---ceEEec-------CCCHHHHHHHHH
Confidence            566667775 33222111          467888889999999999887652   333333       468999999998


Q ss_pred             HHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhh--cCCCCCCeeEEccCCcC
Q 037144          226 LDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFI--DGVECVDSFSFNPHKWL  303 (502)
Q Consensus       226 ~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~--~~~~~aDsi~~~~hK~l  303 (502)
                      +..+.+....+|+++..++++|.+.|+++|.++|+++|+++|||+||+.+.+..+. +...  .+....+.+..+++|.+
T Consensus       136 ~~~~~~~~~~~v~v~~v~s~~G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g-~g~~~~~~~~~~~~~~~tlsK~~  214 (370)
T PRK05937        136 SCRQRSFGRIFIFVCSVYSFKGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDG-KGFCHSLGYENFYAVLVTYSKAL  214 (370)
T ss_pred             hhhccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCC-CchHHhhCCCCCcEEEEechhhh
Confidence            65432223456778889999999999999999999999999999999876554321 1110  12223345667788987


Q ss_pred             CCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHH
Q 037144          304 FTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHV  383 (502)
Q Consensus       304 ~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~  383 (502)
                      + |.|+++++.++  ..........+|.+...                   .......++..+++.+-.++ ....++..
T Consensus       215 g-~~G~~vl~~~~--~~~~~~~~~~~~~~s~~-------------------~~~~~~~a~~aal~~l~~~~-~~~~~~l~  271 (370)
T PRK05937        215 G-SMGAALLSSSE--VKQDLMLNSPPLRYSTG-------------------LPPHLLISIQVAYDFLSQEG-ELARKQLF  271 (370)
T ss_pred             h-cCceEEEcCHH--HHHHHHHhCCCCeecCC-------------------CCHHHHHHHHHHHHHHHhCc-HHHHHHHH
Confidence            5 56777665432  11111111122322110                   00112234445565553333 34567788


Q ss_pred             HHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEE
Q 037144          384 GMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFM  463 (502)
Q Consensus       384 ~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~  463 (502)
                      +++++|.+.|....      +  ..++.+.+...                             ....+.+.|.++|. ++
T Consensus       272 ~l~~~l~~~l~~~~------~--~~~~~i~~~~~-----------------------------~~~~~~~~L~~~gi-~v  313 (370)
T PRK05937        272 RLKEYFAQKFSSAA------P--GCVQPIFLPGI-----------------------------SEQELYSKLVETGI-RV  313 (370)
T ss_pred             HHHHHHHHhcCCCC------C--CCEEEEEeCCh-----------------------------hHHHHHHHHHHCCe-eE
Confidence            88899988875431      0  01122333221                             12456677777786 34


Q ss_pred             EeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          464 THAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       464 ~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      .........++|+++. ..++++||+++++.|+++.++
T Consensus       314 ~~~~~~~~~~iRis~~-~~~t~edid~l~~~L~~~~~~  350 (370)
T PRK05937        314 GVVCFPTGPFLRVNLH-AFNTEDEVDILVSVLATYLEK  350 (370)
T ss_pred             EeeCCCCCCEEEEEcC-CCCCHHHHHHHHHHHHHHHHH
Confidence            4322233458999985 556777999999999988764

>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional

Probab=99.87  E-value=7.1e-20  Score=188.01  Aligned_cols=302  Identities=13%  Similarity=0.062  Sum_probs=197.0

Q ss_pred             hhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHH
Q 037144          113 AAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAA  192 (502)
Q Consensus       113 ~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa  192 (502)
                      +..++..++.+++++++|.++        ..++|+ |++++..++.+...           +++.|++++..|+++...+
T Consensus        84 G~~~l~~~l~~~la~~~g~~~--------~i~~ts-G~~a~~~~~~~l~~-----------~gd~vi~~~~~~~~~~~~~  143 (397)
T PRK06939         84 GTQDLHKELEEKLAKFLGTED--------AILYSS-CFDANGGLFETLLG-----------KEDAIISDALNHASIIDGV  143 (397)
T ss_pred             CCcHHHHHHHHHHHHHhCCCc--------EEEEcC-hHHHHHHHHHHhCC-----------CCCEEEEEhhhhHHHHHHH
Confidence            456778889999999999753        345555 58888766554322           6788999999999999999


Q ss_pred             HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccc
Q 037144          193 QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAY  272 (502)
Q Consensus       193 ~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~  272 (502)
                      +..|.   +++.++.       +|+++|++++++....+.++.+|+.....+.+|.+.++++|.++|++||+|+++|++|
T Consensus       144 ~~~~~---~~~~~~~-------~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~~~~l~~la~~~~~~li~De~~  213 (397)
T PRK06939        144 RLCKA---KRYRYAN-------NDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAPLPEICDLADKYDALVMVDDSH  213 (397)
T ss_pred             HhcCC---ceEEeCC-------CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCCHHHHHHHHHHhCCEEEEECcc
Confidence            99998   8777653       4889999998764333334566776667788999999999999999999999999999


Q ss_pred             ccccccCc-cchhhhcCC-CCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcC-CcccccCccCCCCCcccccCCCc
Q 037144          273 AGSACICP-EFRHFIDGV-ECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLST-NPQYLKNEATDQEPKEQEVGYKD  349 (502)
Q Consensus       273 g~~~~~~~-~~~~~~~~~-~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~  349 (502)
                      +.+.+... .......++ .+.|+++.++||+++.+ ..|+++.+ +.... .+.. ...+...                
T Consensus       214 ~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~g~-r~G~v~~~-~~~~~-~l~~~~~~~~~~----------------  274 (397)
T PRK06939        214 AVGFVGENGRGTVEHFGVMDRVDIITGTLGKALGGA-SGGYTAGR-KEVID-WLRQRSRPYLFS----------------  274 (397)
T ss_pred             cccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhCcc-CceEEEeC-HHHHH-HHHHhCcccccc----------------
Confidence            64332211 000111122 35789999999999655 45776654 33332 2211 1111111                


Q ss_pred             ccccCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhccc
Q 037144          350 WQITLCRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYK  428 (502)
Q Consensus       350 ~~~~~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~  428 (502)
                          ++.. ..+.++..+++.+.  ...++.++..++++++.+.|++. ++++. ++..+++.+...+            
T Consensus       275 ----~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~~~~~------------  334 (397)
T PRK06939        275 ----NSLAPAIVAASIKVLELLE--ESDELRDRLWENARYFREGMTAA-GFTLG-PGEHPIIPVMLGD------------  334 (397)
T ss_pred             ----CCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHc-CCCcC-CCCCCEEEEEECC------------
Confidence                0100 01122333444431  22467788889999999999887 67664 3444555444321            


Q ss_pred             CCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeE----CCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          429 NGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIV----GGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       429 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~----~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                                      .....++.++|.++|..+. +..+    .+..++|++++.. .++++|+++++.|+++.++
T Consensus       335 ----------------~~~~~~~~~~L~~~gI~v~-~~~~~~~~~~~~~iRi~~~~~-~~~~~i~~~l~~L~~~~~~  393 (397)
T PRK06939        335 ----------------AKLAQEFADRLLEEGVYVI-GFSFPVVPKGQARIRTQMSAA-HTKEQLDRAIDAFEKVGKE  393 (397)
T ss_pred             ----------------HHHHHHHHHHHHHCCceEe-eeCCCCCCCCCceEEEEECCC-CCHHHHHHHHHHHHHHHHH
Confidence                            1113567788888886544 3322    2346899998644 4567999999999988765

>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn)

Probab=99.87  E-value=5.9e-20  Score=185.49  Aligned_cols=306  Identities=16%  Similarity=0.139  Sum_probs=194.5

Q ss_pred             ccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhH
Q 037144          109 ISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAF  188 (502)
Q Consensus       109 ~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~  188 (502)
                      ..+|...++|+    .+++++|.+         ..++++|||+|+..++.+.+..          +++.|+++..+|.+.
T Consensus        15 ~~~~~~~~~~~----~la~~~~~~---------~~~~~~sgt~al~~~l~~l~~~----------~gd~vl~~~~~~~~~   71 (352)
T cd00616          15 TLGPKVREFEK----AFAEYLGVK---------YAVAVSSGTAALHLALRALGIG----------PGDEVIVPSFTFVAT   71 (352)
T ss_pred             cCCHHHHHHHH----HHHHHhCCC---------eEEEECCHHHHHHHHHHHcCCC----------CCCEEEeCCcchHHH
Confidence            34555555555    467777753         3688899999998877665311          577899999999999


Q ss_pred             HHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEe
Q 037144          189 QKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHV  268 (502)
Q Consensus       189 ~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhV  268 (502)
                      ..++...|+   +++.+++++ .++.+|+++|++++++++      .+|++++   ++|...|+++|.++|+++|+++++
T Consensus        72 ~~~~~~~g~---~~~~~~~~~-~~~~~d~~~l~~~i~~~~------~~v~~~~---~~G~~~~~~~i~~l~~~~~i~li~  138 (352)
T cd00616          72 ANAILLLGA---TPVFVDIDP-DTYNIDPELIEAAITPRT------KAIIPVH---LYGNPADMDAIMAIAKRHGLPVIE  138 (352)
T ss_pred             HHHHHHcCC---eEEEEecCC-CcCCcCHHHHHHhcCcCC------eEEEEEC---CCCCcCCHHHHHHHHHHcCCeEEE
Confidence            999999999   999999975 257899999999885433      3566553   689999999999999999999999


Q ss_pred             ecccccccccCccchhhhcCCCCCCeeEEc--cCCcCCCCCcceEEEeeCchhhhhhhcC-CcccccCccCCCCCccccc
Q 037144          269 DAAYAGSACICPEFRHFIDGVECVDSFSFN--PHKWLFTTLDCCCLWVKDPSCLLSTLST-NPQYLKNEATDQEPKEQEV  345 (502)
Q Consensus       269 DaA~g~~~~~~~~~~~~~~~~~~aDsi~~~--~hK~l~~p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~  345 (502)
                      |+||+.+.......   +..  ..|..+++  .|||+..+ ..|+++++++......... ...+...          ..
T Consensus       139 D~a~~~g~~~~~~~---~~~--~~d~~~~S~~~~K~~~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~----------~~  202 (352)
T cd00616         139 DAAQALGATYKGRK---VGT--FGDAGAFSFHPTKNLTTG-EGGAVVTNDEELAERARLLRNHGRDRD----------RF  202 (352)
T ss_pred             ECCCCCCCeECCEE---ccc--CcceeEEcCCCCCCCccc-CceEEEECCHHHHHHHHHHHHcCCCCC----------CC
Confidence            99997654432211   111  24555555  55999544 3466666655443221100 0000000          00


Q ss_pred             CCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-----CeeEEEEEeecC-cc
Q 037144          346 GYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR-----NFSLVCFRVTPS-AV  419 (502)
Q Consensus       346 ~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~-----~~~~v~f~~~~~-~~  419 (502)
                      .+........-+...+.....+  ...+++.++.++..++++++++.|+++++++++.++     ...+++|.+.+. +.
T Consensus       203 ~~~~~~~~~~~~~~~~~aa~~~--~~l~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (352)
T cd00616         203 KYEHEILGYNYRLSEIQAAIGL--AQLEKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEAGE  280 (352)
T ss_pred             ccccceeeeccCcCHHHHHHHH--HHHHhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCcCCC
Confidence            0000011111112223333333  344677888899999999999999999999987543     235677776431 10


Q ss_pred             hhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEE---EEeeeEC--------------------CEEEEEE
Q 037144          420 MDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVF---MTHAIVG--------------------GIYVLRF  476 (502)
Q Consensus       420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~---~~~~~~~--------------------g~~~lR~  476 (502)
                                                 ...++.+.|.++|+..   +.+....                    ....+|+
T Consensus       281 ---------------------------~~~~v~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l  333 (352)
T cd00616         281 ---------------------------SRDELIEALKEAGIETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSL  333 (352)
T ss_pred             ---------------------------CHHHHHHHHHHCCCCeeeecCccccCHhhhhccCCCcCCChHHHHHHhCeEEc
Confidence                                       1235666666667621   1111110                    0258999


Q ss_pred             EecCCCCcHHHHHHHHHHHH
Q 037144          477 AAGNSMTMESHVRAAWTVVQ  496 (502)
Q Consensus       477 ~~~~~~t~~~di~~~~~~l~  496 (502)
                      ++ ++.++++||++++++|+
T Consensus       334 ~~-~~~~t~~di~~i~~~l~  352 (352)
T cd00616         334 PL-HPSLTEEEIDRVIEALR  352 (352)
T ss_pred             cC-CCCCCHHHHHHHHHHhC
Confidence            97 46677889999999874

AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein

>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases

Probab=99.87  E-value=5.2e-19  Score=181.78  Aligned_cols=342  Identities=12%  Similarity=0.075  Sum_probs=213.5

Q ss_pred             HHHHHHHHHhhcCCC-CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHh
Q 037144           90 AGIVGEMLSSGFNVV-GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKI  168 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~-~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~  168 (502)
                      +..+.+.+...+... ...|....+..++++.+.+++....|.+-..     ...++|+|+|+++..++.+...      
T Consensus        50 ~~~~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~-----~~ii~t~G~t~al~~~~~~l~~------  118 (403)
T TIGR01265        50 DPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSDLPGKLTA-----DDVVLTSGCSQAIEICIEALAN------  118 (403)
T ss_pred             CHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCH-----HHEEEecChHHHHHHHHHHhCC------
Confidence            444555555555332 2345555566677777777777655543211     2689999999998877776542      


Q ss_pred             CccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144          169 GRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA  248 (502)
Q Consensus       169 ~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~  248 (502)
                           +++.|+++..+|..+...++..|+   +++.+++++++++.+|++++++++.+.+      .+|+++.++|++|.
T Consensus       119 -----~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~~~------~~v~i~~p~NPtG~  184 (403)
T TIGR01265       119 -----PGANILVPRPGFPLYDTRAAFSGL---EVRLYDLLPEKDWEIDLDGLEALADEKT------VAIVVINPSNPCGS  184 (403)
T ss_pred             -----CCCEEEEeCCCchhHHHHHHHcCC---EEEEecCCcccCCccCHHHHHHHhCcCc------cEEEEecCCCCCCC
Confidence                 577888898999888889999999   9999988654457899999999886543      36888889999999


Q ss_pred             cC---ChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCC-CCC-eeEEccCCcCCC-CCcceEEEeeCc-hhhh
Q 037144          249 VD---PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE-CVD-SFSFNPHKWLFT-TLDCCCLWVKDP-SCLL  321 (502)
Q Consensus       249 id---pl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~-~aD-si~~~~hK~l~~-p~~~g~~~~r~~-~~l~  321 (502)
                      +-   ++++|.++|+++|+|+++|++|+......+.+.. +..+. ... .++.++.|.++. ...+|+++..++ ..+.
T Consensus       185 ~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~-~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~  263 (403)
T TIGR01265       185 VFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIP-MASFASIVPVLSLGGISKRWVVPGWRLGWIIIHDPHGIFR  263 (403)
T ss_pred             CCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccc-hhhhccCCcEEEEeecccccCCCcceEEEEEEeCchhhhH
Confidence            85   5899999999999999999999766542211111 11111 122 344579998654 467888887543 2111


Q ss_pred             h-hhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 037144          322 S-TLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFE  400 (502)
Q Consensus       322 ~-~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~  400 (502)
                      . .......+....                 . +........+-.++.......+.+..++..+.++++.+.|+..++++
T Consensus       264 ~~~~~~~~~~~~~~-----------------~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~  325 (403)
T TIGR01265       264 DTVLQGLKNLLQRI-----------------L-GPATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKDIPGLV  325 (403)
T ss_pred             HHHHHHHHHHhhhh-----------------c-CCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCCce
Confidence            1 110000010000                 0 00000111222233222235566778888888999999999888887


Q ss_pred             EecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeECCEEEEEEEec
Q 037144          401 VAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVGGIYVLRFAAG  479 (502)
Q Consensus       401 l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lR~~~~  479 (502)
                      +..+.....+.++++.....                   +..    ...++.+++. +.|..+.++..+....++|++++
T Consensus       326 ~~~p~~g~f~~~~~~~~~~~-------------------~~~----~~~~~~~~l~~~~gv~v~pg~~f~~~~~iRis~~  382 (403)
T TIGR01265       326 CPKPEGAMYLMVKLELELFP-------------------EIK----DDVDFCEKLVREESVICLPGSAFGLPNWVRITIT  382 (403)
T ss_pred             ecCCCceeEEEEeccccccC-------------------CCC----CHHHHHHHHHHhCCEEEeCccccCCCCeEEEEec
Confidence            65444444555555321000                   000    0234556543 45766555555555679999997


Q ss_pred             CCCCcHHHHHHHHHHHHHHHHh
Q 037144          480 NSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       480 ~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      .   +++.+++.++.|.++.++
T Consensus       383 ~---~~~~l~~~l~~l~~~~~~  401 (403)
T TIGR01265       383 V---PESMLEEACSRIKEFCER  401 (403)
T ss_pred             C---CHHHHHHHHHHHHHHHHh
Confidence            3   467899999999887764

This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.

>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]

Probab=99.87  E-value=1.5e-19  Score=164.31  Aligned_cols=312  Identities=13%  Similarity=0.094  Sum_probs=222.5

Q ss_pred             HHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCC
Q 037144          121 VMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRK  200 (502)
Q Consensus       121 ~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~  200 (502)
                      ..+.+++++|++.         .-+|.|+-+|-+..|.+.+.           +++.|++...+||+-.-||+..|+   
T Consensus        66 F~~dlaeFlg~D~---------~R~t~GARe~KfavMhal~~-----------~gd~vV~D~~aHYttyvAAEragl---  122 (382)
T COG1103          66 FLEDLAEFLGMDE---------VRVTAGAREAKFAVMHALCK-----------EGDWVVVDSLAHYTTYVAAERAGL---  122 (382)
T ss_pred             HHHHHHHHhCCce---------eeecccchhhHHHHHHHhcc-----------CCCEEEEcCcchHHHHHHHHhcCC---
Confidence            3444899999874         67899999999877776654           678888999999999999999999   


Q ss_pred             CEEEEecCCCCCcccCHHHHHHHHHHHHhcC-CccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccC
Q 037144          201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAE-LIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIC  279 (502)
Q Consensus       201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g-~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~  279 (502)
                      +|..||......+.++++...+.|++-.+++ ..|.+.++|++....|.+.|.+.++++|++||+.+.+.+||..+-++.
T Consensus       123 ~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grmpv  202 (382)
T COG1103         123 NVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVGRMPV  202 (382)
T ss_pred             eEEecCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecceeeccccc
Confidence            9999997655579999999999999887765 678999999999999999999999999999999999999999888876


Q ss_pred             ccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCC
Q 037144          280 PEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFR  359 (502)
Q Consensus       280 ~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~  359 (502)
                      .. +..     ++|+|+.|+||.+.+..+||++-++.... ...+..+..+......             -.+.|+-|..
T Consensus       203 s~-ke~-----g~DFiVgSGHKsmAAs~PiGvl~~~eE~a-e~V~r~Sg~~~~~KEv-------------ellGCT~rGa  262 (382)
T COG1103         203 SG-KEI-----GADFIVGSGHKSMAASAPIGVLAMSEEWA-EIVLRRSGRAFPKKEV-------------ELLGCTVRGA  262 (382)
T ss_pred             cc-ccc-----CCCEEEecCccchhccCCeeEEeehhHHH-HHHHhhccccccccee-------------eeecccccCc
Confidence            42 332     89999999999999888899999876532 2233333222211110             0233443322


Q ss_pred             -chHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC--CCeeEEEEEeecCcchhhhhhcccCCCccccc
Q 037144          360 -SLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP--RNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYR  436 (502)
Q Consensus       360 -al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~--~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~  436 (502)
                       ...+.+++-.. .+.. ++.+...+.+++|.+.|+++.|+..++.  ...-++-|..+.-.  ..       +      
T Consensus       263 pivTlmASfP~V-~eRV-krWdeEv~kaR~fv~elEkigg~~qlG~rPk~HdLm~Fetp~f~--eI-------a------  325 (382)
T COG1103         263 PIVTLMASFPHV-VERV-KRWDEEVEKARWFVAELEKIGGVKQLGERPKNHDLMKFETPVFH--EI-------A------  325 (382)
T ss_pred             hHHHHHhcCHHH-HHHH-HHHHHHHHHHHHHHHHHHHhhhHHHhCCCCcccceeeecCchHH--HH-------H------
Confidence             22333333222 2322 4566778899999999999988887763  23345555443210  00       0      


Q ss_pred             ccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHhC
Q 037144          437 QFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEAF  502 (502)
Q Consensus       437 ~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~~  502 (502)
                           .+......-|+++|.++|+.-+.++   -..++.+|+  +..+.|++++.+++++++++++
T Consensus       326 -----kk~~r~gyFlY~ELK~RgI~GI~~G---~Tk~~K~sv--yGl~~Eqve~V~~afkeI~eky  381 (382)
T COG1103         326 -----KKHKRKGYFLYEELKKRGIHGIQPG---QTKYFKLSV--YGLSWEQVEYVVDAFKEIAEKY  381 (382)
T ss_pred             -----HhCcCCceeeHHHHHhcCccccccC---ceeEEEEEe--ecCCHHHHHHHHHHHHHHHHhc
Confidence                 0000011246777888887544442   245888886  4467789999999999998864

>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional

Probab=99.87  E-value=1.1e-19  Score=192.21  Aligned_cols=335  Identities=9%  Similarity=0.006  Sum_probs=214.3

Q ss_pred             HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCC--CCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHH
Q 037144           90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDL--PKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKK  167 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~--~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~  167 (502)
                      |..+.+.+...+.. ...|....+..++.+.+.+++.+..+.  +.+       ..++|+|+++++..++.+..+     
T Consensus       164 p~~~~~~~~~~~~~-~~~Y~~~~G~~~lReaia~~~~~~~~~~~~~~-------~I~it~G~~eal~~~~~~l~~-----  230 (517)
T PRK13355        164 PDEVVYDMAQQLTD-TEGYSDSKGLFSARKAIMQYAQLKGLPNVDVD-------DIYTGNGVSELINLSMSALLD-----  230 (517)
T ss_pred             CHHHHHHHHHHhhc-CCCCCCCcChHHHHHHHHHHHHhcCCCCCChh-------HEEEeCcHHHHHHHHHHHhCC-----
Confidence            44444444444432 335776667888999999998766542  332       689999999998777765543     


Q ss_pred             hCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccc
Q 037144          168 IGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAIT  247 (502)
Q Consensus       168 ~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G  247 (502)
                            +++.|+++.+.|..+...++..|.   +++.++++++++|.+|+++|+++++++++      +|+++.++|+||
T Consensus       231 ------~Gd~Vli~~P~y~~y~~~~~~~g~---~~v~~~~~~~~~~~~d~~~l~~~~~~~~k------~i~i~nP~NPTG  295 (517)
T PRK13355        231 ------DGDEVLIPSPDYPLWTACVNLAGG---TAVHYRCDEQSEWYPDIDDIRSKITSRTK------AIVIINPNNPTG  295 (517)
T ss_pred             ------CCCEEEEcCCCCcCHHHHHHHCCC---EEEEeecCcccCCCCCHHHHHHhcCcCce------EEEEECCCCCCC
Confidence                  678899999999999999999999   99999998765689999999998865443      788889999999


Q ss_pred             ccCC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeE-EccCCcCC-CCCcceEEEee-Cchhhh
Q 037144          248 AVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFS-FNPHKWLF-TTLDCCCLWVK-DPSCLL  321 (502)
Q Consensus       248 ~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~-~~~hK~l~-~p~~~g~~~~r-~~~~l~  321 (502)
                      .+-+   +++|+++|++||+++++|.+|....+....+.....-....-.++ .++.|.++ ....+|++++. +.....
T Consensus       296 ~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~i~~~~~~~~~  375 (517)
T PRK13355        296 ALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGLSKSHMIAGYRIGWMILSGNKRIAK  375 (517)
T ss_pred             cCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEEecchhhccCcccceEEEEeeCchhhHH
Confidence            9966   889999999999999999999765432211111111111222344 45899975 55668888764 232211


Q ss_pred             hhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcH-----HHHHHHHHHHHHHHHHHHHHHhcC
Q 037144          322 STLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGV-----ANLRNFIRSHVGMAKLFERLVTSD  396 (502)
Q Consensus       322 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~-----~g~~~~~~~~~~la~~l~~~l~~~  396 (502)
                      ...... ..+....                 .+   ...+..+++...+..     +.+.+ .++..+.++++.+.|+++
T Consensus       376 ~~~~~l-~~~~~~~-----------------~~---~~~~~q~a~~~aL~~~~~~~~~~~~-~~~~~~~r~~l~~~L~~~  433 (517)
T PRK13355        376 DYIEGL-NMLANMR-----------------LC---SNVPAQSIVQTALGGHQSVKDYLVP-GGRVYEQRELVYNALNAI  433 (517)
T ss_pred             HHHHHH-HHHhcCc-----------------CC---cChHHHHHHHHHhcCCccHHHHHHH-HHHHHHHHHHHHHHHhcC
Confidence            111000 0000000                 00   123344444444421     12222 234556678899999998


Q ss_pred             CCeEEecCCCeeEEEE-EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC--CEEE
Q 037144          397 KRFEVAFPRNFSLVCF-RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG--GIYV  473 (502)
Q Consensus       397 ~~~~l~~~~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~  473 (502)
                      ||+++. +|+.++++| ++.....                    .... +  ...+.+.|.++|.++.++..+.  +..+
T Consensus       434 ~g~~~~-~p~g~fy~~~~l~~~~~--------------------~~~~-~--~~~~~~ll~~~gV~v~pg~~F~~~~~~~  489 (517)
T PRK13355        434 PGISAV-KPKAAFYIFPKIDVKKF--------------------NIHD-D--EQFALDLLHDKKVLIVQGTGFNWDKPDH  489 (517)
T ss_pred             CCcccC-CCCeeeEEEeecCcccC--------------------CCCC-H--HHHHHHHHHhCCEEEeCcchhCCCCcCE
Confidence            898875 677787777 3432100                    0000 0  1223344556687666655553  4679


Q ss_pred             EEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          474 LRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       474 lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      +|++++   .++++++.+++.|.+..+.
T Consensus       490 ~Ris~~---~~~~~l~~a~~rl~~~~~~  514 (517)
T PRK13355        490 FRVVYL---PRLEDLEDAMDRLADFFSY  514 (517)
T ss_pred             EEEEeC---CCHHHHHHHHHHHHHHHHH
Confidence            999985   4677999999999887754

>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]

Probab=99.87  E-value=1.5e-19  Score=167.43  Aligned_cols=343  Identities=13%  Similarity=0.096  Sum_probs=233.8

Q ss_pred             cCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHH
Q 037144           82 YFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAAR  161 (502)
Q Consensus        82 ~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~  161 (502)
                      +.|++.+.+    +.+..+++.+...+ .+|.+..+.+++.+-+...|...+..      --++.++|+.+.-.|+....
T Consensus        21 ~gPGPsnl~----~~V~~A~~~~~lgh-~sPe~~qIm~~v~egikyVFkT~n~~------tf~isgsGh~g~E~al~N~l   89 (385)
T KOG2862|consen   21 LGPGPSNLS----GRVQEAMSRPSLGH-MSPEFVQIMDEVLEGIKYVFKTANAQ------TFVISGSGHSGWEAALVNLL   89 (385)
T ss_pred             ecCCCcCCC----HHHHHhhcCCcccc-CCHHHHHHHHHHHHHHHHHhccCCCc------eEEEecCCcchHHHHHHhhc
Confidence            335544433    44555566655443 67999999999999999999886653      23667777766665555443


Q ss_pred             HHHHHHhCccCCCCeEEEeCCCCchh--HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEE
Q 037144          162 DRVLKKIGRENISKLVVYSSDQTHCA--FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCA  239 (502)
Q Consensus       162 ~~~~~~~~~~~~~~~~v~~s~~~H~s--~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~  239 (502)
                      +           |++.+++-..+-.+  +...++.+|+   +|..|+.+.++  ...++.++++|.+.+     |.+|.+
T Consensus        90 e-----------Pgd~vLv~~~G~wg~ra~D~~~r~ga---~V~~v~~~~G~--~~~le~i~~~lsqh~-----p~~vfv  148 (385)
T KOG2862|consen   90 E-----------PGDNVLVVSTGTWGQRAADCARRYGA---EVDVVEADIGQ--AVPLEEITEKLSQHK-----PKAVFV  148 (385)
T ss_pred             C-----------CCCeEEEEEechHHHHHHHHHHhhCc---eeeEEecCccc--CccHHHHHHHHHhcC-----CceEEE
Confidence            3           66666665555443  5567788999   99999998754  889999999998743     779999


Q ss_pred             ecCCccccccCC-hhHHHHHHHHhCCEEEeeccc--ccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeC
Q 037144          240 TVGTTAITAVDP-LKPLCDVAKQFGIWVHVDAAY--AGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKD  316 (502)
Q Consensus       240 t~gtt~~G~idp-l~eI~~i~~~~g~~lhVDaA~--g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~  316 (502)
                      ++|.|+||...| ++.+.++|++|+..|+||+.-  ||--+..+++        ++|+.-...+|.++.|.|.+.+...+
T Consensus       149 ~hgdsSTgV~q~~~~~~g~lc~k~~~lllVD~VaSlggt~F~mDew--------gVDvaytgSQKaL~aP~GLsiisfS~  220 (385)
T KOG2862|consen  149 THGDSSTGVLQDLLAISGELCHKHEALLLVDTVASLGGTEFEMDEW--------GVDVAYTGSQKALGAPAGLSIISFSD  220 (385)
T ss_pred             EecCccccccchHHHHHHHHhhcCCeEEEEechhhcCCccceehhh--------cccEEEecchhhcCCCCCcceeecCH
Confidence            999999999999 788889999999999999754  3433444555        89999999999999999999987766


Q ss_pred             chhhh--hhhcCCcccccCccCCCCCcccccCCCcccccCCCCCC---c----hHHHHHHHHhcHHHHHHHHHHHHHHHH
Q 037144          317 PSCLL--STLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFR---S----LKLWVVIRNFGVANLRNFIRSHVGMAK  387 (502)
Q Consensus       317 ~~~l~--~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~---a----l~~~~~l~~~g~~g~~~~~~~~~~la~  387 (502)
                      +..-.  +.-+....|.++.-       ...++....-+. |.+.   +    ..+-++|..+-++|+++.++++.++++
T Consensus       221 ka~~~~~~rK~~~~~~yFd~~-------~~~~~wgc~~e~-~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~  292 (385)
T KOG2862|consen  221 KALEAIRDRKTKPVSFYFDIL-------RLGNFWGCDGEP-RAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSK  292 (385)
T ss_pred             HHHHHHhhccCCceEEEEeHH-------hhcchhccCCcc-cccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            54321  11111122222110       000110000000 2211   1    255577778889999999999999999


Q ss_pred             HHHHHHhcCCCeEEecC---CCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEE
Q 037144          388 LFERLVTSDKRFEVAFP---RNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMT  464 (502)
Q Consensus       388 ~l~~~l~~~~~~~l~~~---~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~  464 (502)
                      +++..|+++ |+++...   +.++.+.-.-.|.+.                    +       -+.+..++...+.+.+.
T Consensus       293 ~l~~~l~~~-GLq~fv~~e~~rlptvttv~vp~gv--------------------D-------w~dVv~~~~~~~~vei~  344 (385)
T KOG2862|consen  293 WLKLSLEAL-GLQLFVVDEELRLPTVTTVKVPYGV--------------------D-------WKDVVAYAMSHYVVEIG  344 (385)
T ss_pred             HHHHHHHHh-CccceecChhhccCcceeeecCCCC--------------------C-------HHHHHHHHHHhcCEEec
Confidence            999999998 8887642   234444333333322                    1       23556666666665554


Q ss_pred             eeeE-CCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144          465 HAIV-GGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       465 ~~~~-~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~  500 (502)
                      ++-- -...++||.++.-+.+.+.|+..++.|+....
T Consensus       345 gglg~~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq  381 (385)
T KOG2862|consen  345 GGLGPTVGKVFRIGLLGCNANVEYIDNVVELLKLALQ  381 (385)
T ss_pred             cccCCCcccEEEEEEeeccCCcHHHHHHHHHHHHHHh
Confidence            4321 13468999998888888899999999887654

>PRK00011 glyA serine hydroxymethyltransferase; Reviewed

Probab=99.86  E-value=5.5e-20  Score=189.99  Aligned_cols=306  Identities=12%  Similarity=0.054  Sum_probs=191.7

Q ss_pred             hhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHH-
Q 037144          112 PAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQK-  190 (502)
Q Consensus       112 p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~-  190 (502)
                      +....+|+.+++++++++|.+..       . +++++||+|+..++.+...           +++.|+++..+|.++.. 
T Consensus        67 ~~~~~~e~~~~~~la~~~g~~~~-------~-i~~~sgt~al~~~l~~l~~-----------~gd~Vl~~~~~~~~~~~~  127 (416)
T PRK00011         67 EYVDVVEQLAIDRAKELFGAEYA-------N-VQPHSGSQANAAVYFALLK-----------PGDTILGMDLAHGGHLTH  127 (416)
T ss_pred             hHHHHHHHHHHHHHHHHhCCCce-------e-eecCCchHHHHHHHHHhcC-----------CCCEEEEeccccCCcccc
Confidence            44567887788899999998753       2 4445678888766655422           67788888888865321 


Q ss_pred             --HH--HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEE
Q 037144          191 --AA--QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWV  266 (502)
Q Consensus       191 --aa--~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~l  266 (502)
                        ..  ...|+   +++.++++.+ ++.+|+++|++++++..     +.+|+++.  +.+|...|+++|+++|+++|+++
T Consensus       128 ~~~~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~i~~~~-----~k~v~~~~--~~~~~~~~~~~I~~la~~~~~~l  196 (416)
T PRK00011        128 GSPVNFSGKLY---NVVSYGVDEE-TGLIDYDEVEKLALEHK-----PKLIIAGA--SAYSRPIDFKRFREIADEVGAYL  196 (416)
T ss_pred             cccccccccee---eEeecCcCcc-cCCcCHHHHHHHHHhcC-----CCEEEECC--CcCCCccCHHHHHHHHHHcCCEE
Confidence              11  22345   7788888642 47899999999997521     22555542  45677789999999999999999


Q ss_pred             EeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccC
Q 037144          267 HVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVG  346 (502)
Q Consensus       267 hVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~  346 (502)
                      ++|+||+.+..........   +..+|.++.++||++.+|. .|+++..++............+...             
T Consensus       197 ivD~a~~~g~~~~g~~~~~---~~~~di~~~S~~K~l~g~~-gg~i~~~~~~~~~~l~~~~~~~~~~-------------  259 (416)
T PRK00011        197 MVDMAHIAGLVAAGVHPSP---VPHADVVTTTTHKTLRGPR-GGLILTNDEELAKKINSAVFPGIQG-------------  259 (416)
T ss_pred             EEECcchhcccccCccCCC---CCCCcEEEecCCcCCCCCC-ceEEEeCCHHHHHHHHHHhCccccC-------------
Confidence            9999987554322111111   2268999999999996665 4566655444332221111111100             


Q ss_pred             CCcccccCCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec-CCCeeEEEEEeecCcchhhhh
Q 037144          347 YKDWQITLCRRF-RSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAF-PRNFSLVCFRVTPSAVMDKLR  424 (502)
Q Consensus       347 ~~~~~~~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~-~~~~~~v~f~~~~~~~~~~~~  424 (502)
                              +... ...+++.++.....+++.+++++..++++++++.|++. |+++.. ....+++.+.+.+.+.     
T Consensus       260 --------~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~i~~~~~~~-----  325 (416)
T PRK00011        260 --------GPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAER-GFRVVSGGTDNHLVLVDLRSKGL-----  325 (416)
T ss_pred             --------CccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CCeeeecCCCCeEEEEeCcccCC-----
Confidence                    0000 11233344444445678889999999999999999987 788763 2334666666543210     


Q ss_pred             hcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEee------eECCEEEEEEEecC---CCCcHHHHHHHHHHH
Q 037144          425 TKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHA------IVGGIYVLRFAAGN---SMTMESHVRAAWTVV  495 (502)
Q Consensus       425 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~------~~~g~~~lR~~~~~---~~t~~~di~~~~~~l  495 (502)
                                            ....+.+.|.+.|..+-.+.      .......+|++...   ...+++|++++++.|
T Consensus       326 ----------------------~~~~~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l  383 (416)
T PRK00011        326 ----------------------TGKEAEAALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELI  383 (416)
T ss_pred             ----------------------CHHHHHHHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHH
Confidence                                  02346666767786532211      11123468986432   123578999999999


Q ss_pred             HHHHH
Q 037144          496 QEHLE  500 (502)
Q Consensus       496 ~~~~~  500 (502)
                      +++..
T Consensus       384 ~~~~~  388 (416)
T PRK00011        384 ADVLD  388 (416)
T ss_pred             HHHHh
Confidence            98754

>PRK05958 8-amino-7-oxononanoate synthase; Reviewed

Probab=99.86  E-value=1.7e-19  Score=184.35  Aligned_cols=295  Identities=12%  Similarity=0.066  Sum_probs=190.3

Q ss_pred             HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH
Q 037144          115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI  194 (502)
Q Consensus       115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~  194 (502)
                      ..+..++.+++++++|.+         ..+++++|+++++.++.....           +++.|++++..|.+...++++
T Consensus        83 ~~~~~~l~~~la~~~~~~---------~~i~~~~g~~~~~~~l~~~~~-----------~gd~V~~~~~~~~~~~~~~~~  142 (385)
T PRK05958         83 SPAHEALEEELAEWFGAE---------RALLFSSGYAANLAVLTALAG-----------KGDLIVSDKLNHASLIDGARL  142 (385)
T ss_pred             cHHHHHHHHHHHHHhCCC---------cEEEECcHHHHHHHHHHHhCC-----------CCCEEEEeCccCHHHHHHHHh
Confidence            445566777888888843         357777888888765543321           677888999999999999999


Q ss_pred             cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccccc
Q 037144          195 VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAG  274 (502)
Q Consensus       195 ~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~  274 (502)
                      .|.   .++.+|.       .|++++++++++..   ..+.+|++....+.+|.+.|+++|+++|++||+|+++|++|+.
T Consensus       143 ~g~---~~~~~~~-------~d~~~l~~~i~~~~---~~~~lvi~~~~~~~~G~~~~l~~i~~ia~~~~~~li~De~~~~  209 (385)
T PRK05958        143 SRA---RVRRYPH-------NDVDALEALLAKWR---AGRALIVTESVFSMDGDLAPLAELVALARRHGAWLLVDEAHGT  209 (385)
T ss_pred             cCC---ceEEeCC-------CCHHHHHHHHHhcc---CCCeEEEEEecccCCCCcCCHHHHHHHHHHhCCEEEEECcccc
Confidence            998   8888874       37899999886531   1134666666788999999999999999999999999999965


Q ss_pred             ccccCccch-hhhcCCC-CCC-eeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCccc
Q 037144          275 SACICPEFR-HFIDGVE-CVD-SFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQ  351 (502)
Q Consensus       275 ~~~~~~~~~-~~~~~~~-~aD-si~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~  351 (502)
                      +.+...... ....++. ..| .+..++||+++.+ | |+++. ++............|...                  
T Consensus       210 g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~-G-g~~~~-~~~~~~~~~~~~~~~~~~------------------  268 (385)
T PRK05958        210 GVLGPQGRGLAAEAGLAGEPDVILVGTLGKALGSS-G-AAVLG-SETLIDYLINRARPFIFT------------------  268 (385)
T ss_pred             cccCCCCCchHHhhCCCCCCceEEEEechhhcccC-C-cEEEc-CHHHHHHHHHhCccceec------------------
Confidence            543211000 0011121 234 5678899999753 3 55543 443322111111112111                  


Q ss_pred             ccCCC-CCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCC
Q 037144          352 ITLCR-RFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNG  430 (502)
Q Consensus       352 ~~~sr-~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~  430 (502)
                        ++. ......++.+++.+...  .++.++..++++++.+.|++. ++++. ++..++++|.++.              
T Consensus       269 --~~~~~~~~aa~~aal~~~~~~--~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~~~~~--------------  328 (385)
T PRK05958        269 --TALPPAQAAAARAALRILRRE--PERRERLAALIARLRAGLRAL-GFQLM-DSQSAIQPLIVGD--------------  328 (385)
T ss_pred             --CCCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHc-CCCcC-CCCCCEEEEEeCC--------------
Confidence              111 11222344555544221  567788899999999999987 67765 4566777776532              


Q ss_pred             CcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeE---CCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144          431 TYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIV---GGIYVLRFAAGNSMTMESHVRAAWTVVQEH  498 (502)
Q Consensus       431 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~---~g~~~lR~~~~~~~t~~~di~~~~~~l~~~  498 (502)
                                    .....++.+++.++|..+......   .+..++|+++. ..+++++++++++.|+++
T Consensus       329 --------------~~~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~lRis~~-~~~~~~~i~~~l~~l~~~  384 (385)
T PRK05958        329 --------------NERALALAAALQEQGFWVGAIRPPTVPAGTSRLRITLT-AAHTEADIDRLLEALAEA  384 (385)
T ss_pred             --------------HHHHHHHHHHHHHCCceEecccCCCCCCCCceEEEEec-CCCCHHHHHHHHHHHHhc
Confidence                          112346778888788754332111   23468999985 445677999999999775

>PRK13034 serine hydroxymethyltransferase; Reviewed

Probab=99.86  E-value=8e-20  Score=187.73  Aligned_cols=309  Identities=10%  Similarity=0.059  Sum_probs=193.5

Q ss_pred             ChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh-HH
Q 037144          111 SPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA-FQ  189 (502)
Q Consensus       111 ~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s-~~  189 (502)
                      .|...++|+.+.+.+++++|.+..        -++++||+.||+.++.+...           +++.|+++...|.+ +.
T Consensus        69 ~~~~~~lE~~~~~~la~l~g~~~a--------lv~~~SG~~A~~~~l~al~~-----------~GD~Vl~~~~~~~~~~~  129 (416)
T PRK13034         69 CEFVDEVEALAIERAKQLFGCDYA--------NVQPHSGSQANGAVYLALLK-----------PGDTILGMSLSHGGHLT  129 (416)
T ss_pred             ChHHHHHHHHHHHHHHHHhCCCce--------EEecCCcHHHHHHHHHHhcC-----------CCCEEEEcCccceeeee
Confidence            466788888777899999998642        25578899999887766532           78899999999987 33


Q ss_pred             HHHHHcCCCCCCE--EEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEE
Q 037144          190 KAAQIVGIDRKNI--RAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVH  267 (502)
Q Consensus       190 ~aa~~~Glg~~~v--~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lh  267 (502)
                      ..++....+. .+  +.++++.. ++.+|+++|++.++..     .|.+|+.+.  +.+|..-|+++|.++|++||++++
T Consensus       130 ~g~~~~~~~~-~~~~~~~~~~~~-~~~~d~~~le~~l~~~-----~~klVi~~~--~~~g~~~dl~~l~~la~~~g~~li  200 (416)
T PRK13034        130 HGAKVSLSGK-WYNAVQYGVDRL-TGLIDYDEVEELAKEH-----KPKLIIAGF--SAYPRELDFARFREIADEVGALLM  200 (416)
T ss_pred             cCCcceeccc-eeeeEEcccccc-cCCcCHHHHHHHHhhc-----CCeEEEECC--CccccccCHHHHHHHHHHcCCEEE
Confidence            3333221110 22  34555432 4579999999988642     134555433  456888899999999999999999


Q ss_pred             eecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCC
Q 037144          268 VDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGY  347 (502)
Q Consensus       268 VDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~  347 (502)
                      ||+||+.+.+..+..   ...+..+|.+++++|||+.+|.| |+++..++.... ....   +++..             
T Consensus       201 vD~Aha~G~~~~g~~---~~~~~~~Di~~~s~~K~l~g~~G-G~v~~~~~~~~~-~~~~---~~~~~-------------  259 (416)
T PRK13034        201 VDMAHIAGLVAAGEH---PNPFPHAHVVTTTTHKTLRGPRG-GMILTNDEEIAK-KINS---AVFPG-------------  259 (416)
T ss_pred             EeCcccccCcccCCC---CCCCCCceEEEEeCcccCCCCCC-eEEEECcHHHHH-HHHh---hcCCc-------------
Confidence            999998877654321   12234799999999999987765 555555443221 1111   11110             


Q ss_pred             CcccccCCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-CCeeEEEEEeecCcchhhhhh
Q 037144          348 KDWQITLCRRF-RSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP-RNFSLVCFRVTPSAVMDKLRT  425 (502)
Q Consensus       348 ~~~~~~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~-~~~~~v~f~~~~~~~~~~~~~  425 (502)
                          ++.+... ...++..++...-..+..++.++..+++++|++.|++. |+++..+ .+.+++.+.+...+.      
T Consensus       260 ----~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~-G~~~~~~~~~t~i~~v~~~~~~~------  328 (416)
T PRK13034        260 ----LQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKER-GYDLVSGGTDNHLLLVDLRPKGL------  328 (416)
T ss_pred             ----ccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHc-CCEeccCCCCCcEEEEEcCCCCC------
Confidence                0001011 11122222222211234466789999999999999988 8998743 456676666543211      


Q ss_pred             cccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEee------eECCEEEEEEEecC---CCCcHHHHHHHHHHHH
Q 037144          426 KYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHA------IVGGIYVLRFAAGN---SMTMESHVRAAWTVVQ  496 (502)
Q Consensus       426 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~------~~~g~~~lR~~~~~---~~t~~~di~~~~~~l~  496 (502)
                                           ....+.++|.+.|.......      .......||++++.   ...+++||+++++.|.
T Consensus       329 ---------------------~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~  387 (416)
T PRK13034        329 ---------------------SGKDAEQALERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWIL  387 (416)
T ss_pred             ---------------------CHHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHH
Confidence                                 12344466666786432200      00113469999643   1345789999999998


Q ss_pred             HHHH
Q 037144          497 EHLE  500 (502)
Q Consensus       497 ~~~~  500 (502)
                      ++..
T Consensus       388 ~~~~  391 (416)
T PRK13034        388 DVLD  391 (416)
T ss_pred             HHHh
Confidence            8754

>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase

Probab=99.86  E-value=2.1e-19  Score=184.69  Aligned_cols=296  Identities=12%  Similarity=0.109  Sum_probs=191.3

Q ss_pred             HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcC
Q 037144          117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVG  196 (502)
Q Consensus       117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~G  196 (502)
                      ...++.+.+++++|.+         ..+++++|++||..++..++..         .++.+|+++...|.++..++...|
T Consensus        91 ~~~~Le~~la~~~g~~---------~~l~~~sG~~an~~ai~~l~~~---------~~~~~v~~~~~~h~s~~~~~~~~g  152 (402)
T TIGR01821        91 PHVELEAELADLHGKE---------SALVFTSGYVANDATLATLAKI---------IPGCVIFSDELNHASMIEGIRHSG  152 (402)
T ss_pred             HHHHHHHHHHHHhCCC---------eEEEECchHHHHHHHHHHhhCC---------CCCCEEEEcchHhHHHHHHHHHcC
Confidence            3445666688888854         3577788899998888776532         045677777778999988888888


Q ss_pred             CCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccccccc
Q 037144          197 IDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSA  276 (502)
Q Consensus       197 lg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~  276 (502)
                      .   .++.++.       .|+++|++.++...  ...+.+|+++.+.+++|.+.|+++|.++|++||++++||+||+.+.
T Consensus       153 ~---~~~~~~~-------~d~~~l~~~l~~~~--~~~~~~v~~e~~~~~~G~~~~l~~i~~l~~~~~~~livDea~~~G~  220 (402)
T TIGR01821       153 A---EKFIFRH-------NDVAHLEKLLQSVD--PNRPKIIAFESVYSMDGDIAPIEEICDLADKYGALTYLDEVHAVGL  220 (402)
T ss_pred             C---eEEEECC-------CCHHHHHHHHHhcc--CCCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEeCcccccc
Confidence            8   7766653       37888998886431  1235688889999999999999999999999999999999998443


Q ss_pred             ccCccchhh--hcCC-CCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhc-CCcccccCccCCCCCcccccCCCcccc
Q 037144          277 CICPEFRHF--IDGV-ECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLS-TNPQYLKNEATDQEPKEQEVGYKDWQI  352 (502)
Q Consensus       277 ~~~~~~~~~--~~~~-~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~-~~~~yl~~~~~~~~~~~~~~~~~~~~~  352 (502)
                      + .+.....  ..++ ...|.++.++.|.++.+.  |+++. ++... +.+. ....|.+.                   
T Consensus       221 ~-g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G--G~i~~-~~~~~-~~l~~~~~~~~~t-------------------  276 (402)
T TIGR01821       221 Y-GPRGGGIAERDGLMHRIDIIEGTLAKAFGVVG--GYIAA-SRKLI-DAIRSYAPGFIFT-------------------  276 (402)
T ss_pred             c-CCCCCccchhccCCCCCeEEEEechhhhccCC--ceeec-CHHHH-HHHHHhCcCceec-------------------
Confidence            2 1211111  1122 346888889999997653  45443 33332 2221 11122211                   


Q ss_pred             cCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCC
Q 037144          353 TLCRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGT  431 (502)
Q Consensus       353 ~~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~  431 (502)
                       .+.. ..+.++.++++.+...  ..+.++..++++++.+.|+++ |++++ ++..+++.+.+..               
T Consensus       277 -~~~~~~~~aaa~aaL~~~~~~--~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~i~~i~~~~---------------  336 (402)
T TIGR01821       277 -TSLPPAIAAGATASIRHLKES--QDLRRAHQENVKRLKNLLEAL-GIPVI-PNPSHIVPVIIGD---------------  336 (402)
T ss_pred             -CcCCHHHHHHHHHHHHHhhcC--HHHHHHHHHHHHHHHHHHHHc-CCCcC-CCCCCEEEEEeCC---------------
Confidence             1111 1122333445443222  445566678999999999887 77765 4456676665421               


Q ss_pred             cccccccchhHhhHHHHHHHHHHHHhc-CcEEEEeee----ECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          432 YDQYRQFSEEERTNEFNRELLESINVS-GKVFMTHAI----VGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       432 ~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~----~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                                   .....++.++|.++ |. ++.+..    ..+..++|++++.. .+++||++++++|+++.++
T Consensus       337 -------------~~~a~~~~~~L~~~~Gi-~v~~~~~p~~~~g~~~lRis~~~~-~t~edi~~~~~~l~~~~~~  396 (402)
T TIGR01821       337 -------------AALCKKVSDLLLNKHGI-YVQPINYPTVPRGTERLRITPTPA-HTDKMIDDLVEALLLVWDR  396 (402)
T ss_pred             -------------HHHHHHHHHHHHhcCCE-EEEeECCCCCCCCCceEEEEeCCC-CCHHHHHHHHHHHHHHHHH
Confidence                         11235677777655 65 444321    23456899998654 5566999999999998765

This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.

>PLN02231 alanine transaminase

Probab=99.86  E-value=8e-19  Score=184.72  Aligned_cols=331  Identities=12%  Similarity=0.107  Sum_probs=217.0

Q ss_pred             CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCC
Q 037144          105 GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQT  184 (502)
Q Consensus       105 ~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~  184 (502)
                      ...|..+.+..++.+.+++|+.+..|.+...     ...++|+|+++++..++.+....          +++.|++..+.
T Consensus       161 ~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~p-----e~I~iT~Ga~~ai~~~~~~l~~~----------~gd~Vli~~P~  225 (534)
T PLN02231        161 TGAYSHSQGIKGLRDAIAAGIEARDGFPADP-----NDIFLTDGASPAVHMMMQLLIRS----------EKDGILCPIPQ  225 (534)
T ss_pred             ccCcCCCCCcHHHHHHHHHHHHhccCCCCCc-----ccEEEeCCHHHHHHHHHHHhccC----------CCCEEEEeCCC
Confidence            4568888889999999999999988875332     26899999999987777665431          56788899999


Q ss_pred             chhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc---CChhHHHHHHHH
Q 037144          185 HCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV---DPLKPLCDVAKQ  261 (502)
Q Consensus       185 H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i---dpl~eI~~i~~~  261 (502)
                      |..+..+++..|.   +++.++++++++|.+|+++|++++++...++..+.+|+++.++|+||.+   +.+++|+++|++
T Consensus       226 Y~~y~~~~~~~g~---~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~  302 (534)
T PLN02231        226 YPLYSASIALHGG---TLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQ  302 (534)
T ss_pred             ChhHHHHHHHcCC---EEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHH
Confidence            9999999999999   9999999865568999999999998765555456677888999999998   467889999999


Q ss_pred             hCCEEEeecccccccccC-cc---chhhhc--CC--CCCCeeEE-ccCCcCC--CCCcceEEEee--CchhhhhhhcCCc
Q 037144          262 FGIWVHVDAAYAGSACIC-PE---FRHFID--GV--ECVDSFSF-NPHKWLF--TTLDCCCLWVK--DPSCLLSTLSTNP  328 (502)
Q Consensus       262 ~g~~lhVDaA~g~~~~~~-~~---~~~~~~--~~--~~aDsi~~-~~hK~l~--~p~~~g~~~~r--~~~~l~~~~~~~~  328 (502)
                      ||+|+++|.+|....+.. ..   ......  +.  .....+++ ++.|.++  ....+|++.+.  ++.... .+....
T Consensus       303 ~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~~~~l~~-~l~k~~  381 (534)
T PLN02231        303 EGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFTSDVRE-QIYKVA  381 (534)
T ss_pred             cCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEEEecCCHHHHH-HHHHHH
Confidence            999999999997765421 11   111111  11  11224554 6999653  56778888763  333322 221110


Q ss_pred             ccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh-----cHHHH-------HHHHHHHHHHHHHHHHHHhcC
Q 037144          329 QYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF-----GVANL-------RNFIRSHVGMAKLFERLVTSD  396 (502)
Q Consensus       329 ~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-----g~~g~-------~~~~~~~~~la~~l~~~l~~~  396 (502)
                      . ...                    ++   ..+...++...+     |...+       .++.+.+.++++.+.+.|+++
T Consensus       382 ~-~~~--------------------~s---~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~  437 (534)
T PLN02231        382 S-VNL--------------------CS---NISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSL  437 (534)
T ss_pred             h-hhc--------------------CC---ChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            0 000                    11   111222222222     11222       234667888899999999999


Q ss_pred             CCeEEecCCCeeEEEE-Eee-cCc-chhhhhhcccCCCcccccccchhHhhH-HHHHHHHHHHH-hcCcEEEEeeeEC--
Q 037144          397 KRFEVAFPRNFSLVCF-RVT-PSA-VMDKLRTKYKNGTYDQYRQFSEEERTN-EFNRELLESIN-VSGKVFMTHAIVG--  469 (502)
Q Consensus       397 ~~~~l~~~~~~~~v~f-~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~-~~g~~~~~~~~~~--  469 (502)
                      +++++. +|+.+++.| ++. |.. ..                   ..+..+ .....++.++. +.|.+++++..+.  
T Consensus       438 ~gi~~~-~p~Ggfylw~~l~lp~~~~~-------------------~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~  497 (534)
T PLN02231        438 EGVTCN-KAEGAMYLFPRIHLPQKAIK-------------------AAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQV  497 (534)
T ss_pred             CCceec-CCCeeeEEeccccCcHHHHH-------------------HHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCC
Confidence            898875 677788877 221 110 00                   000000 00123445454 4587776666554  


Q ss_pred             -CEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          470 -GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       470 -g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                       +..++|+++.   +++++++..++.|.+..++
T Consensus       498 ~g~~~~Rit~~---~~~e~l~eal~RL~~~~~~  527 (534)
T PLN02231        498 PGTWHFRCTIL---PQEDKIPAIVSRLTEFHKS  527 (534)
T ss_pred             CCCCeEEEEeC---CCHHHHHHHHHHHHHHHHH
Confidence             3457999985   5777898888888877654

>PLN03226 serine hydroxymethyltransferase; Provisional

Probab=99.86  E-value=1e-19  Score=188.64  Aligned_cols=320  Identities=12%  Similarity=0.073  Sum_probs=198.6

Q ss_pred             cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEE-cCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCC------
Q 037144          110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVI-QGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSD------  182 (502)
Q Consensus       110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~-t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~------  182 (502)
                      ......++|..+.+...++|+......     ...+ +.+|+.||+.++.+...           +++.|++.+      
T Consensus        74 G~~~~d~lE~~~~~~~~~~f~~~~~~~-----~~nv~~~SG~~AN~av~~aL~~-----------pgD~Il~~d~~~gGh  137 (475)
T PLN03226         74 GNEYIDQIETLCQKRALEAFRLDPEKW-----GVNVQPLSGSPANFAVYTALLQ-----------PHDRIMGLDLPHGGH  137 (475)
T ss_pred             CChhHHHHHHHHHHHHHHHhCCCccee-----EEecCcCchHHHHHHHHHHhCC-----------CCCEEEECCCCcCcc
Confidence            334668899989999999999876420     1112 37889999877766643           677888733      


Q ss_pred             CCchhHHHHHHHcCCCCCCEE----EEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHH
Q 037144          183 QTHCAFQKAAQIVGIDRKNIR----AIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDV  258 (502)
Q Consensus       183 ~~H~s~~~aa~~~Glg~~~v~----~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i  258 (502)
                      ..|.+....+++.+.   .+.    .++++. +++.+|+++|++++.+..     |.+|++  +.+.+|..-|+++|.++
T Consensus       138 l~H~~~~~g~~~s~~---~~~~~~~~y~~~~-~~g~iD~d~Le~~l~~~~-----pklIv~--~~S~~s~~~D~a~i~~i  206 (475)
T PLN03226        138 LSHGYQTDGKKISAT---SIYFESMPYRLDE-STGLIDYDKLEKKAMLFR-----PKLIIA--GASAYPRDWDYARMRKI  206 (475)
T ss_pred             hhhhhhhcccccccc---eEEEEeeeeeecC-CCCCcCHHHHHHHHhhcC-----CeEEEE--ecCcCCCccCHHHHHHH
Confidence            334444433333333   222    344454 357999999999986432     445544  24568888999999999


Q ss_pred             HHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCc---ccccCcc
Q 037144          259 AKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNP---QYLKNEA  335 (502)
Q Consensus       259 ~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~---~yl~~~~  335 (502)
                      |+++|++++||+||+.+.+..+.....   ++.+|++++++||||.+|.| |++++++.. .........   .|..   
T Consensus       207 a~~~ga~LlvD~AH~~Gli~~~~~~~p---~~~~Div~~t~hK~L~GP~G-g~I~~~~~~-~~~~~~g~~~~~d~~~---  278 (475)
T PLN03226        207 ADKVGALLMCDMAHISGLVAAQEAASP---FEYCDVVTTTTHKSLRGPRG-GMIFFRKGP-KPPKGQGEGAVYDYED---  278 (475)
T ss_pred             HHHcCCEEEEEchhhhCcccCCCCCCC---CCCCeEEEecCcccccCCCc-eEEEEchhh-cccccCCCccHHHHHH---
Confidence            999999999999999988765432221   23799999999999998987 777776532 110000000   0100   


Q ss_pred             CCCCCcccccCC-CcccccCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-CCeeEEEE
Q 037144          336 TDQEPKEQEVGY-KDWQITLCRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP-RNFSLVCF  412 (502)
Q Consensus       336 ~~~~~~~~~~~~-~~~~~~~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~-~~~~~v~f  412 (502)
                              ..+. ....++++-. ....++..+++.+-..+++++.++..+++++|++.|.+. |++++.. ....++.+
T Consensus       279 --------~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~~-G~~l~~~~t~~hi~lv  349 (475)
T PLN03226        279 --------KINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANRLMSK-GYKLVTGGTDNHLVLW  349 (475)
T ss_pred             --------HhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHhC-CCEEEcCCCCCCEEEE
Confidence                    0000 0011222211 123456677777666678888999999999999999985 9999863 23456666


Q ss_pred             EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEee---e--ECCEEEEEEEe---cCCCCc
Q 037144          413 RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHA---I--VGGIYVLRFAA---GNSMTM  484 (502)
Q Consensus       413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~---~--~~g~~~lR~~~---~~~~t~  484 (502)
                      .+.+.++.                           ..++.+.|.+.|+..-...   .  .-....+|+..   +...-+
T Consensus       350 ~~~~~gi~---------------------------~~~~~~~L~~~~I~~nk~~~p~~~~~~~~~giRiGt~~lt~~g~~  402 (475)
T PLN03226        350 DLRPLGLT---------------------------GSRVEKVLDLAHITLNKNAVPGDSSALVPGGVRIGTPAMTSRGLV  402 (475)
T ss_pred             EccCCCCC---------------------------HHHHHHHHHHCCCEECCCCCCCCcccCCCCCcccCcHHHHHCCCC
Confidence            65443221                           1233444444565422111   0  01123577621   345567


Q ss_pred             HHHHHHHHHHHHHHHH
Q 037144          485 ESHVRAAWTVVQEHLE  500 (502)
Q Consensus       485 ~~di~~~~~~l~~~~~  500 (502)
                      ++|++++.+.|.++++
T Consensus       403 ~~d~~~ia~~i~~~~~  418 (475)
T PLN03226        403 EKDFEKVAEFLHRAVT  418 (475)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            7899999999988765

>PRK05957 aspartate aminotransferase; Provisional

Probab=99.86  E-value=3.4e-19  Score=182.29  Aligned_cols=333  Identities=12%  Similarity=0.078  Sum_probs=212.7

Q ss_pred             HHHHHHHHHHhhcC-CCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHH
Q 037144           89 VAGIVGEMLSSGFN-VVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKK  167 (502)
Q Consensus        89 ~~~~~~~~l~~~~n-~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~  167 (502)
                      +|..+.+.+...++ .....|....+..++.+.+++++++.+|.+...    ....++|+|+++++..++.+..+     
T Consensus        41 ~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~----~~~i~~t~G~~~~l~~~~~~~~~-----  111 (389)
T PRK05957         41 PPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNN----EQAIVVTAGSNMAFMNAILAITD-----  111 (389)
T ss_pred             CCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCeEEEeCChHHHHHHHHHHhcC-----
Confidence            34445666655543 223456666677889999999999999974210    01578899998888666655432     


Q ss_pred             hCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccc
Q 037144          168 IGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAIT  247 (502)
Q Consensus       168 ~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G  247 (502)
                            +++.|+++.+.|......++..|+   +++.+|.+.  ++.+|+++|++++++++      .+|+++.++|+||
T Consensus       112 ------~gd~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~~------klv~~~~p~NPtG  174 (389)
T PRK05957        112 ------PGDEIILNTPYYFNHEMAITMAGC---QPILVPTDD--NYQLQPEAIEQAITPKT------RAIVTISPNNPTG  174 (389)
T ss_pred             ------CCCEEEEeCCCCcCHHHHHHhcCC---EEEEeecCC--CCCcCHHHHHHhcCcCc------eEEEEeCCCCCCC
Confidence                  677888888888877777788899   999999863  56899999999986543      3778888999999


Q ss_pred             ccCC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhc--CCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhh
Q 037144          248 AVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFID--GVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLL  321 (502)
Q Consensus       248 ~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~--~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~  321 (502)
                      .+-|   +++|+++|++||+++++|.+|+..............  ....-..++.++.|.++.| ..+|+++..+ ... 
T Consensus       175 ~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~-~~~-  252 (389)
T PRK05957        175 VVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVIPI-HLL-  252 (389)
T ss_pred             cCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccceeEEEecCH-HHH-
Confidence            9977   889999999999999999999765432111111111  1111124456689998644 4588887643 222 


Q ss_pred             hhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCe
Q 037144          322 STLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSDKRF  399 (502)
Q Consensus       322 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~~~  399 (502)
                      +.+.....+....                       ...+....+...+  +.+.+++..++..++++++.+.|++++++
T Consensus       253 ~~~~~~~~~~~~~-----------------------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~  309 (389)
T PRK05957        253 EAIKKIQDTILIC-----------------------PPVVSQYAALGALQVGKSYCQQHLPEIAQVRQILLKSLGQLQDR  309 (389)
T ss_pred             HHHHHHHhhcccC-----------------------CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            2221111111000                       0122333333333  34556777788888999999999988775


Q ss_pred             EEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh-cCcEEEEeeeEC--CEEEEEE
Q 037144          400 EVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV-SGKVFMTHAIVG--GIYVLRF  476 (502)
Q Consensus       400 ~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--g~~~lR~  476 (502)
                      ..+.++..++++|...+.+.                         +  ..++.+++.+ .|..+.++..+.  +..++|+
T Consensus       310 ~~~~~~~gg~~~~~~~~~~~-------------------------~--~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi  362 (389)
T PRK05957        310 CTLHPANGAFYCFLKVNTDL-------------------------N--DFELVKQLIREYRVAVIPGTTFGMKNGCYLRI  362 (389)
T ss_pred             ccccCCCeeEEEEEeCCCCC-------------------------C--hHHHHHHHHHHCCEEEccchhhCCCCCCEEEE
Confidence            23345665665543323211                         1  2456667654 576554443332  2458999


Q ss_pred             EecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          477 AAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       477 ~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      +++..  +++++++.++.|.+..++
T Consensus       363 s~~~~--~~~~l~~~~~~l~~~~~~  385 (389)
T PRK05957        363 AYGAL--QKATAKEGIERLVQGLKT  385 (389)
T ss_pred             EEecC--CHHHHHHHHHHHHHHHHh
Confidence            99643  455777777777776553

>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional

Probab=99.86  E-value=1.4e-18  Score=178.83  Aligned_cols=344  Identities=10%  Similarity=0.030  Sum_probs=217.6

Q ss_pred             CHHHHHHHHHHhhcCCC-CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHH
Q 037144           88 SVAGIVGEMLSSGFNVV-GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLK  166 (502)
Q Consensus        88 ~~~~~~~~~l~~~~n~~-~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~  166 (502)
                      .+|..+.+.+...++.. ...|....+..++.+.+.+|+.+.+|.+-..     ...++|+|+++++..++.+..+    
T Consensus        49 ~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~-----~~I~it~G~~~al~~~~~~l~~----  119 (409)
T PLN00143         49 RTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQLSP-----DDVYLTLGCKHAAEIIIKVLAR----  119 (409)
T ss_pred             CCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCH-----hhEEEecChHHHHHHHHHHHcC----
Confidence            44555666666655543 3457666677889999999999887764221     2688999999988777665543    


Q ss_pred             HhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccc
Q 037144          167 KIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAI  246 (502)
Q Consensus       167 ~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~  246 (502)
                             +++.|+++.+++..+...++..|+   +++.+++++++++.+|+++|++++++.+      ..++++.++|+|
T Consensus       120 -------~gd~v~v~~P~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~~~------~~~~~~nP~NPT  183 (409)
T PLN00143        120 -------PEANILLPRPGFPDVETYAIFHHL---EIRHFDLLPEKGWEVDLDAVEAIADENT------IAMVIINPGNPC  183 (409)
T ss_pred             -------CCCEEEEcCCCCcCHHHHHHHcCC---EEEEEeccCCCCCcCCHHHHHHhcccCC------EEEEEECCCCCC
Confidence                   677888999999999999999999   9999998644457899999998875433      367777899999


Q ss_pred             cccCC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCC-C-eeEEccCCcCC-CCCcceEEEeeCchhh
Q 037144          247 TAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECV-D-SFSFNPHKWLF-TTLDCCCLWVKDPSCL  320 (502)
Q Consensus       247 G~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~a-D-si~~~~hK~l~-~p~~~g~~~~r~~~~l  320 (502)
                      |.+-+   +++|+++|++|++++++|.+|............ +..+... . .++.++.|.++ ....+|+++..++..+
T Consensus       184 G~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~-~~~~~~~~~vi~~~SfSK~f~~pGlRvG~~v~~~p~~~  262 (409)
T PLN00143        184 GSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVP-MGLFASIVPVITLGSISKRWMIPGWGLGWLVTCDPSGL  262 (409)
T ss_pred             CCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcc-hhhhcccCcEEEEccchhhcCCCccceEEEEeeCchhh
Confidence            99966   778888999999999999999765542111110 1111111 2 35566999954 5577888887544221


Q ss_pred             hhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 037144          321 LSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF---GVANLRNFIRSHVGMAKLFERLVTSDK  397 (502)
Q Consensus       321 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---g~~g~~~~~~~~~~la~~l~~~l~~~~  397 (502)
                      .+.......+.....           .    ..++   ..+...++...+   +.+.+++.+++..+..+++.+.|++++
T Consensus       263 ~~~~~~~~~~~~~~~-----------~----~~~~---~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~  324 (409)
T PLN00143        263 LQICEIADSIKKALN-----------P----APFP---PTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEIP  324 (409)
T ss_pred             hhhHHHHHHHHHHHh-----------c----cCCC---CchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            111000000000000           0    0000   122223333333   245678888888888888999998876


Q ss_pred             CeEEecCCCeeEEEE-EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHH-HHhcCcEEEEeeeECCEEEEE
Q 037144          398 RFEVAFPRNFSLVCF-RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLES-INVSGKVFMTHAIVGGIYVLR  475 (502)
Q Consensus       398 ~~~l~~~~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-l~~~g~~~~~~~~~~g~~~lR  475 (502)
                      +.....+|+.+++.| +++.....                   ...    ...++..+ +.+.|..+.++..++...++|
T Consensus       325 ~~~~~~~p~gg~f~w~~l~~~~~~-------------------~~~----~~~~~~~~ll~~~gV~v~pg~~f~~~~~iR  381 (409)
T PLN00143        325 CIMCPQKAEGAFFALVKLNLLLLE-------------------DIE----DDMEFCLKLAKEESLIILPGVTVGLKNWLR  381 (409)
T ss_pred             CCCCCCCCCeeEEEEEecchhhcC-------------------CCC----CHHHHHHHHHHhCCEEEeCccccCCCCeEE
Confidence            544334455554444 44321000                   000    01233333 355677666655565567999


Q ss_pred             EEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          476 FAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       476 ~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      ++++   ++++++++.++.|.++.++
T Consensus       382 i~~~---~~~~~l~~al~rl~~~l~~  404 (409)
T PLN00143        382 ITFA---VEQSSLEDGLGRLKSFCGR  404 (409)
T ss_pred             EEEc---CCHHHHHHHHHHHHHHHHH
Confidence            9997   3577999999999887654

>PRK08363 alanine aminotransferase; Validated

Probab=99.86  E-value=3.1e-19  Score=183.23  Aligned_cols=333  Identities=10%  Similarity=0.051  Sum_probs=214.1

Q ss_pred             HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144           90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG  169 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~  169 (502)
                      +..+.+.+...+......|...++..++++.+.+|+...+|..-+.     ...++|+|+++++..++.+..+       
T Consensus        48 ~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~-----~~i~it~G~~~al~~~~~~~~~-------  115 (398)
T PRK08363         48 PEHMKEAYCRAIKEGHNYYGPSEGLPELREAIVKREKRKNGVDITP-----DDVRVTAAVTEALQLIFGALLD-------  115 (398)
T ss_pred             CHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCCh-----hhEEEeCCHHHHHHHHHHHhCC-------
Confidence            4445555555543323346566778899999999998887753221     2689999999998777665533       


Q ss_pred             ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEE-ecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144          170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAI-KTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA  248 (502)
Q Consensus       170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v-~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~  248 (502)
                          +++.|+++..+|..+...++..|.   .++.+ +.++ +++.+|++.|++++.+.+      .+|+++.++|+||.
T Consensus       116 ----~gd~Vl~~~p~y~~~~~~~~~~g~---~~v~~~~~~~-~~~~~d~~~l~~~~~~~~------~~v~l~~p~NPtG~  181 (398)
T PRK08363        116 ----PGDEILIPGPSYPPYTGLVKFYGG---VPVEYRTIEE-EGWQPDIDDIRKKITEKT------KAIAVINPNNPTGA  181 (398)
T ss_pred             ----CCCEEEEcCCCCcchHHHHHHcCC---EEEEeccccc-cCCcCCHHHHHhhCCcce------EEEEEECCCCCCCc
Confidence                678899999999999999999998   88888 4543 346899999999886533      36778899999999


Q ss_pred             cCC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCC-Cee-EEccCCcC-CCCCcceEEEee-Cchhhh
Q 037144          249 VDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECV-DSF-SFNPHKWL-FTTLDCCCLWVK-DPSCLL  321 (502)
Q Consensus       249 idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~a-Dsi-~~~~hK~l-~~p~~~g~~~~r-~~~~l~  321 (502)
                      +-+   +++|.++|+++|+++++|++|+...+.. .... +..+... ..+ ..+++|++ ..+..+|++++. ++..+.
T Consensus       182 ~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~-~~~~-~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~  259 (398)
T PRK08363        182 LYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEG-KHVS-PGSLTKDVPVIVMNGLSKVYFATGWRLGYIYFVDPEGKLA  259 (398)
T ss_pred             CcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCC-cccC-HHHcCcCCcEEEEecchhccCCccceEEEEEEeCcHHHHH
Confidence            866   8899999999999999999997654321 1111 1111122 234 45799995 466778988873 332221


Q ss_pred             hhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCe
Q 037144          322 STLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSDKRF  399 (502)
Q Consensus       322 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~~~  399 (502)
                      ........+...                 ..    ....+...++...+  ..+.+++..++..++++++.+.|++++++
T Consensus       260 ~l~~~~~~~~~~-----------------~~----~~s~~~q~~~~~~l~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~  318 (398)
T PRK08363        260 EVREAIDKLARI-----------------RL----CPNTPAQFAAIAGLTGPMDYLEEYMKKLKERRDYIYKRLNEIPGI  318 (398)
T ss_pred             HHHHHHHHHhcc-----------------cc----cCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence            111000000000                 00    00122222222222  35667778888889999999999988888


Q ss_pred             EEecCCCeeEEEE-EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHH-HHHHHhcCcEEEEeeeEC--CEEEEE
Q 037144          400 EVAFPRNFSLVCF-RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNREL-LESINVSGKVFMTHAIVG--GIYVLR  475 (502)
Q Consensus       400 ~l~~~~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~l~~~g~~~~~~~~~~--g~~~lR  475 (502)
                      ++. +|..+++.| ++++...                      .  .  ..++ .+.+.++|..+.++..+.  +..++|
T Consensus       319 ~~~-~p~g~~~~~~~l~~~~~----------------------~--~--~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iR  371 (398)
T PRK08363        319 STT-KPQGAFYIFPRIEEGPW----------------------K--D--DKEFVLDVLHEAHVLFVHGSGFGEYGAGHFR  371 (398)
T ss_pred             Eec-CCCeEEEEEEEeccCCC----------------------C--C--HHHHHHHHHHhCCEEEeCchhhCCCCCCeEE
Confidence            764 566777766 3432100                      0  0  1233 334456676655554443  346999


Q ss_pred             EEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          476 FAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       476 ~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      ++++.   ++++++++++.|+++.++
T Consensus       372 is~~~---~~~~l~~~l~~l~~~~~~  394 (398)
T PRK08363        372 LVFLP---PVEILEEAMDRFEEFMRE  394 (398)
T ss_pred             EEecC---CHHHHHHHHHHHHHHHHH
Confidence            99862   567899999999887654

>PRK06290 aspartate aminotransferase; Provisional

Probab=99.86  E-value=4.6e-19  Score=182.03  Aligned_cols=337  Identities=12%  Similarity=0.007  Sum_probs=216.6

Q ss_pred             HHHHHHHHhhcC-CCCcccccChhhHHHHHHHHHHHHHhcCCC-CccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHh
Q 037144           91 GIVGEMLSSGFN-VVGLDWISSPAAVELENIVMDWLGQMLDLP-KSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKI  168 (502)
Q Consensus        91 ~~~~~~l~~~~n-~~~~~~~~~p~~~~le~~~~~~l~~l~g~~-~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~  168 (502)
                      ..+.+.+...+. .....|.. .+..++.+.+.+|+.+.+|.+ -+.    ....++|+|+++++..++.+..+      
T Consensus        60 ~~~~~~l~~~~~~~~~~~Y~~-~G~~~lr~aia~~~~~~~g~~~~~~----~~~I~it~Gs~~al~~~~~~~~~------  128 (410)
T PRK06290         60 ESVVEVLCEEAKKPENRGYAD-NGIQEFKEAAARYMEKVFGVKDIDP----VTEVIHSIGSKPALAMLPSCFIN------  128 (410)
T ss_pred             HHHHHHHHHHHhCCCCCCCCC-CCcHHHHHHHHHHHHHHcCCCcCCC----cceEEEccCHHHHHHHHHHHhCC------
Confidence            334444443332 22233543 567889999999999888864 211    01488999988887666554432      


Q ss_pred             CccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144          169 GRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA  248 (502)
Q Consensus       169 ~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~  248 (502)
                           +++.|++..+.+..+...++..|.   +++.+|++.++++.+|+++|++++.+.      +.+|+++.++|+||.
T Consensus       129 -----~gd~Vlv~~P~y~~~~~~~~~~g~---~v~~v~~~~~~~~~~d~~~l~~~~~~~------~k~i~l~nP~NPTG~  194 (410)
T PRK06290        129 -----PGDVTLMTVPGYPVTGTHTKYYGG---EVYNLPLLEENNFLPDLDSIPKDIKEK------AKLLYLNYPNNPTGA  194 (410)
T ss_pred             -----CCCEEEEeCCCCccHHHHHHHcCC---EEEEEecCCCcCCcCCHHHHHHhhccc------ceEEEEECCCCCCCc
Confidence                 677888888899888899999999   999999986556888999999888643      347888889999999


Q ss_pred             cCC---hhHHHHHHHHhCCEEEeecccccccccCccchhh--hcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhh
Q 037144          249 VDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF--IDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLS  322 (502)
Q Consensus       249 idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~  322 (502)
                      +-+   +++|.++|++||+||++|.+|+...... .....  +.+....+.+..++.|.++.| ..+|+++. ++..+. 
T Consensus       195 v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~-~~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~-~~~l~~-  271 (410)
T PRK06290        195 VATKEFYEEVVDFAKENNIIVVQDAAYAALTFDG-KPLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVG-NELIVK-  271 (410)
T ss_pred             CCCHHHHHHHHHHHHHcCeEEEEecchhhceeCC-CCcChhcCCCccccEEEEeechhhcCCchhheEeEEe-CHHHHH-
Confidence            966   6788888999999999999998654321 11111  111223457778899999644 55677664 443322 


Q ss_pred             hhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 037144          323 TLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG-VANLRNFIRSHVGMAKLFERLVTSDKRFEV  401 (502)
Q Consensus       323 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~~~~l  401 (502)
                      .+.....+...                       ....+...++...+. .+.+++..+++.++++++.+.|++. ++.+
T Consensus       272 ~l~~~~~~~~~-----------------------~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~  327 (410)
T PRK06290        272 AFATVKDNNDS-----------------------GQFIAIQKAGIYALDHPEITEKIREKYSRRLDKLVKILNEV-GFKA  327 (410)
T ss_pred             HHHHHHhcccc-----------------------CCcHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHHHHhC-CCee
Confidence            22111111100                       001122222333331 2345667778888899999999987 7776


Q ss_pred             ecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCC
Q 037144          402 AFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNS  481 (502)
Q Consensus       402 ~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~  481 (502)
                      . +|+.+++.|...+....                   .... .....++.++|.++|.+++.+.... ..++|++++.+
T Consensus       328 ~-~p~g~f~l~v~lp~~~~-------------------~~~~-~~~~~~~~~~Ll~~~~v~~~p~~~~-~~~lRi~~~~~  385 (410)
T PRK06290        328 E-MPGGTFYLYVKAPKGTK-------------------SGIK-FENAEEFSQYLIKEKLISTVPWDDA-GHFLRFSVTFE  385 (410)
T ss_pred             c-CCCeeeEEEEECCCccc-------------------cCCC-CCCHHHHHHHHHHhCCEEEECCccc-cCeEEEEEEcc
Confidence            5 56667666533332100                   0000 0013467788888787655443211 25899999877


Q ss_pred             CCcHHHHHHHHHHHHHHHHh
Q 037144          482 MTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       482 ~t~~~di~~~~~~l~~~~~~  501 (502)
                      ..++++.++++++|.+.+.+
T Consensus       386 ~~~~~~~~~~~~~l~~~~~~  405 (410)
T PRK06290        386 AKDEEEEDRILEEIKRRLSD  405 (410)
T ss_pred             cccccchhHHHHHHHHHHhh
Confidence            77888999999999887653

>TIGR01364 serC_1 phosphoserine aminotransferase

Probab=99.86  E-value=4.5e-20  Score=184.92  Aligned_cols=309  Identities=10%  Similarity=0.023  Sum_probs=200.0

Q ss_pred             cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEc-CCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhH
Q 037144          110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQ-GTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAF  188 (502)
Q Consensus       110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t-~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~  188 (502)
                      -++.+.++-+++.+.++++||.+.+.      ..+++ +|||+|+-.++......        +.+.+++..+..+|. +
T Consensus        31 r~~~f~~~~~~~~~~l~~l~~~~~~~------~v~~~~gsgT~a~ea~~~nl~~~--------~~~~l~i~~G~fg~r-~   95 (349)
T TIGR01364        31 RSKEFEAVANEAESDLRELLNIPDNY------EVLFLQGGATGQFAAVPLNLLAE--------GKVADYIVTGAWSKK-A   95 (349)
T ss_pred             CchHHHHHHHHHHHHHHHHhCCCCCc------eEEEEcCCchHHHHHHHHhcCCC--------CCeEEEEECCHHHHH-H
Confidence            34566688889999999999986542      46665 45998886665543221        113344444544443 4


Q ss_pred             HHHHHHcCCCCCCEEEEecCCCC--CcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEE
Q 037144          189 QKAAQIVGIDRKNIRAIKTTKSS--SYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWV  266 (502)
Q Consensus       189 ~~aa~~~Glg~~~v~~v~~~~~~--~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~l  266 (502)
                      .+.|+.+|+    +..+..++..  .-.+|+++++.  ++      .+.+|.+++..|+||...|     ++++.+++.+
T Consensus        96 ~~~a~~~g~----~~~~~~~~~~~~~~~~~~~~~~~--~~------~~~~v~~th~ETstGv~~~-----~l~~~~~~l~  158 (349)
T TIGR01364        96 AKEAKKYGV----VNVVASGKEGNYTKIPDPSTWEI--SE------DAAYVHYCANETIHGVEFR-----ELPDVKNAPL  158 (349)
T ss_pred             HHHHHHhCC----cEEEeccccCCCCCCCCHHhcCC--CC------CCCEEEEcCCCCcccEecc-----eecccCCCeE
Confidence            667777786    3444432110  11456665552  11      2458999999999999876     6677789999


Q ss_pred             EeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccC
Q 037144          267 HVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVG  346 (502)
Q Consensus       267 hVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~  346 (502)
                      +||++++.+..+.+-.        ..|++++++||+++ |.|.|+++++++..- ..-...+.|.....        ...
T Consensus       159 iVDavss~g~~~id~~--------~~d~~~~ssqK~lg-P~Glg~l~~s~~~~~-~~~~~~~~~~~~~~--------~~~  220 (349)
T TIGR01364       159 VADMSSNILSRPIDVS--------KFGLIYAGAQKNIG-PAGLTVVIVRKDLLG-RASRITPSMLNYKI--------HAE  220 (349)
T ss_pred             EEEccccccCccCCHH--------HccEEEEecccccC-CCceEEEEECHHHHh-hcccCCCCcchHHH--------HHh
Confidence            9999998888776532        45699999999986 889999999876442 11111112211000        000


Q ss_pred             CCcccccCCCC-CCchHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-C--Ce-eEEEEEeecCcch
Q 037144          347 YKDWQITLCRR-FRSLKLWVVIRNFGVA-NLRNFIRSHVGMAKLFERLVTSDKRFEVAFP-R--NF-SLVCFRVTPSAVM  420 (502)
Q Consensus       347 ~~~~~~~~sr~-~~al~~~~~l~~~g~~-g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~-~--~~-~~v~f~~~~~~~~  420 (502)
                       .. ...++-. ....++..+++.+-.+ |++++.+++.++++++++.|++++|+..... +  .+ .+++|.+++.   
T Consensus       221 -~~-~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~~---  295 (349)
T TIGR01364       221 -ND-SMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNE---  295 (349)
T ss_pred             -cC-CCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecCCh---
Confidence             00 0001111 1235777888888778 7999999999999999999999988766532 1  34 4577776431   


Q ss_pred             hhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144          421 DKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~  500 (502)
                                               .+..++++.+.++|. ++..... ..+.+|+|+.++ ++++|||+++++|+++.+
T Consensus       296 -------------------------~~~~~~~~~~~~~Gi-~~~~~~~-~~g~vRvS~~~~-nt~edid~l~~al~~~~~  347 (349)
T TIGR01364       296 -------------------------ELEKRFLKEAEERGL-VSLKGHR-SVGGMRASIYNA-MPLEGVQALVDFMKEFQK  347 (349)
T ss_pred             -------------------------hHhHHHHHHHHHCCC-cccCCcc-ccCeeEEECcCC-CCHHHHHHHHHHHHHHHH
Confidence                                     112456667777897 4433321 235899999655 667799999999999876


Q ss_pred             h
Q 037144          501 A  501 (502)
Q Consensus       501 ~  501 (502)
                      +
T Consensus       348 ~  348 (349)
T TIGR01364       348 K  348 (349)
T ss_pred             h
Confidence            4

This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).

>PRK08960 hypothetical protein; Provisional

Probab=99.86  E-value=1.8e-19  Score=184.39  Aligned_cols=328  Identities=13%  Similarity=0.035  Sum_probs=210.5

Q ss_pred             HHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHh
Q 037144           89 VAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKI  168 (502)
Q Consensus        89 ~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~  168 (502)
                      +|..+.+.+...+......|....+..++++.+.+|+.+.+|.+...     ...++|+|+++++..++.+...      
T Consensus        46 ~~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~-----~~i~it~G~~~al~~~~~~~~~------  114 (387)
T PRK08960         46 TAEPIVAAGQAALAAGHTRYTAARGLPALREAIAGFYAQRYGVDVDP-----ERILVTPGGSGALLLASSLLVD------  114 (387)
T ss_pred             CCHHHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHhCCCCCh-----hhEEEccCcHHHHHHHHHHhcC------
Confidence            35556666666664443457666778889999999999887764221     2689999999998776654432      


Q ss_pred             CccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144          169 GRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA  248 (502)
Q Consensus       169 ~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~  248 (502)
                           +++.|+++.++|.+....++..|.   +++.+|++.++++.+|+++|++++++.+      .+|+++.++|+||.
T Consensus       115 -----~gd~vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~~~~~~------~~i~i~~p~NPtG~  180 (387)
T PRK08960        115 -----PGKHWLLADPGYPCNRHFLRLVEG---AAQLVPVGPDSRYQLTPALVERHWNADT------VGALVASPANPTGT  180 (387)
T ss_pred             -----CCCEEEEcCCCCcchHHHHHhcCC---eEEEEecCcccCCCCCHHHHHHHhCccc------eEEEEECCCCCCCc
Confidence                 678899999999999999999999   9999999765567899999999886543      36777889999999


Q ss_pred             cCC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCC-eeEEccCCcCC-CCCcceEEEeeCchhhhhh
Q 037144          249 VDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVD-SFSFNPHKWLF-TTLDCCCLWVKDPSCLLST  323 (502)
Q Consensus       249 idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aD-si~~~~hK~l~-~p~~~g~~~~r~~~~l~~~  323 (502)
                      +-+   +++|+++|++||+|+++|.+|...... +..... ..+. .+ .+..+++|.++ ....+|+++..+ ..+. .
T Consensus       181 ~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~-~~~~~~-~~~~-~~vi~~~S~SK~~g~~GlRiG~~~~~~-~~~~-~  255 (387)
T PRK08960        181 LLSRDELAALSQALRARGGHLVVDEIYHGLTYG-VDAASV-LEVD-DDAFVLNSFSKYFGMTGWRLGWLVAPP-AAVP-E  255 (387)
T ss_pred             CcCHHHHHHHHHHHHHcCCEEEEEccccccccC-CCCCCh-hhcc-CCEEEEeecccccCCcccEEEEEEcCH-HHHH-H
Confidence            866   556777899999999999999765332 111111 1121 23 44567999986 445588887643 3222 2


Q ss_pred             hcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 037144          324 LSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF---GVANLRNFIRSHVGMAKLFERLVTSDKRFE  400 (502)
Q Consensus       324 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---g~~g~~~~~~~~~~la~~l~~~l~~~~~~~  400 (502)
                      +.....+..                   . +   ...+...++...+   ....+.+..+.+.+.++.+.+.|++. ++.
T Consensus       256 ~~~~~~~~~-------------------~-~---~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~-~~~  311 (387)
T PRK08960        256 LEKLAQNLY-------------------I-S---ASTPAQHAALACFEPETLAILEARRAEFARRRDFLLPALREL-GFG  311 (387)
T ss_pred             HHHHHhhhc-------------------c-C---CCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhc-CCc
Confidence            211100000                   0 0   0122222222222   13456666777788888899999887 666


Q ss_pred             EecCCCeeEEEEEeecC-cchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh-cCcEEEEeeeEC---CEEEEE
Q 037144          401 VAFPRNFSLVCFRVTPS-AVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV-SGKVFMTHAIVG---GIYVLR  475 (502)
Q Consensus       401 l~~~~~~~~v~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~---g~~~lR  475 (502)
                      +...|..+++.|.-.+. ..                         +  ..++.+++.+ .|..+.++..+.   +..++|
T Consensus       312 ~~~~p~g~~f~~~~~~~~~~-------------------------~--~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iR  364 (387)
T PRK08960        312 IAVEPQGAFYLYADISAFGG-------------------------D--AFAFCRHFLETEHVAFTPGLDFGRHQAGQHVR  364 (387)
T ss_pred             CCcCCCeeEEEEEeccccCC-------------------------C--HHHHHHHHHHhCCEEEcCchHhCCCCCCCeEE
Confidence            53345445544432221 10                         1  2355666554 576554443332   235899


Q ss_pred             EEecCCCCcHHHHHHHHHHHHHHHH
Q 037144          476 FAAGNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       476 ~~~~~~~t~~~di~~~~~~l~~~~~  500 (502)
                      ++++.   +.+.+..+++.|.++.+
T Consensus       365 i~~~~---~~~~l~~al~~l~~~~~  386 (387)
T PRK08960        365 FAYTQ---SLPRLQEAVERIARGLR  386 (387)
T ss_pred             EEecC---CHHHHHHHHHHHHHHHh
Confidence            99974   45678888887776553

>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]

Probab=99.86  E-value=2.8e-20  Score=171.23  Aligned_cols=302  Identities=16%  Similarity=0.199  Sum_probs=203.1

Q ss_pred             cccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCc
Q 037144          106 LDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTH  185 (502)
Q Consensus       106 ~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H  185 (502)
                      ..|...|-+..+|+++    ++++|-+         .|+|+++||++|+.++++.++.          ++-.|++.+.+|
T Consensus        50 dVyGeD~tt~rLE~~v----A~l~GKE---------AgLFv~SGTmgNllaIm~Hc~~----------rg~eii~gd~~H  106 (384)
T KOG1368|consen   50 DVYGEDPTTNRLEQRV----AELFGKE---------AGLFVPSGTMGNLLAIMVHCHQ----------RGSEIIVGDRAH  106 (384)
T ss_pred             ccccCCccHHHHHHHH----HHHhCcc---------ceeeecccccccHHHHHHHhcC----------CCceEEeccchh
Confidence            4577888899999885    5677654         4799999999999999999875          788999999999


Q ss_pred             hhHHHHH---HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHH-h-cCCccEEEEEecCCcccc-ccCChh---HHH
Q 037144          186 CAFQKAA---QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDV-E-AELIPLFLCATVGTTAIT-AVDPLK---PLC  256 (502)
Q Consensus       186 ~s~~~aa---~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~-~-~g~~p~~Vv~t~gtt~~G-~idpl~---eI~  256 (502)
                      .-.+++.   .+.|+   .++.|....  ++.||++++|++|.... . ......+|++..-.+.+| .+-||+   +|.
T Consensus       107 I~~~E~gg~s~l~gv---~~~tv~~e~--dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~  181 (384)
T KOG1368|consen  107 IHRYEQGGISQLAGV---HVRTVKNEN--DGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVK  181 (384)
T ss_pred             eeehhccChhhhccc---eeEeeeeCC--CCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHH
Confidence            6544433   44455   787777654  57999999999997432 1 112234777776666666 666655   667


Q ss_pred             HHHHHhCCEEEeecccc---cccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccC
Q 037144          257 DVAKQFGIWVHVDAAYA---GSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKN  333 (502)
Q Consensus       257 ~i~~~~g~~lhVDaA~g---~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~  333 (502)
                      ++|+++|+.+|+|||.-   +.+.-+|- +...   +.+||+++.++|.+++|.  |-+++.++..+..+     .++..
T Consensus       182 ~lak~~glkLH~DGARi~NAavasgV~v-k~i~---~~fDSVsiCLSKglgAPV--GSViVG~k~FI~kA-----~~~RK  250 (384)
T KOG1368|consen  182 ALAKRHGLKLHMDGARIFNAAVASGVPV-KKIC---SAFDSVSICLSKGLGAPV--GSVIVGSKDFIDKA-----RHFRK  250 (384)
T ss_pred             HHHhccCCeeecchhhhhhHHHHcCCCH-HHHH---HhhhhhhhhhhccCCCCc--ccEEEccHHHHHHH-----HHHHH
Confidence            78999999999999852   12222221 2222   278999999999999994  45555555433221     22221


Q ss_pred             ccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-CCeeEEEE
Q 037144          334 EATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP-RNFSLVCF  412 (502)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~-~~~~~v~f  412 (502)
                                       ++.++.|-...-..+++-.+ .+.+ ..+++.++.|+.+.+.+...+++++-.+ .+.+++.+
T Consensus       251 -----------------alGGGmRQsGvLaaaaLval-~~~~-~~L~~dHk~A~~lAe~~~~~~~i~v~v~a~etNiv~~  311 (384)
T KOG1368|consen  251 -----------------ALGGGMRQSGVLAAAALVAL-DENV-PLLRADHKRAKELAEYINTPEEIRVEVPAVETNIVNM  311 (384)
T ss_pred             -----------------HhcCchhHHHHHHHHHHHHh-hcch-HHHHHHHHHHHHHHHHhccccceeeecchhhcceeee
Confidence                             22223232222222333332 2222 3667788899999999998877887544 57888877


Q ss_pred             EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHH
Q 037144          413 RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAW  492 (502)
Q Consensus       413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~  492 (502)
                      .+....+                           ....|++.+.+.|...+....    ..+|+++. +..+.++++.++
T Consensus       312 ~l~q~~~---------------------------~~~~l~~~~~k~gi~lm~~~s----~r~Rivlh-~Qvt~~~ve~~~  359 (384)
T KOG1368|consen  312 VLCQARL---------------------------TAEELCKFLEKNGILLMGGAS----RRIRIVLH-HQVTDEDVEYVK  359 (384)
T ss_pred             ecccccC---------------------------CHHHHHHHHHHCCeEEeeccc----cceEEEEE-EecCHHHHHHHH
Confidence            6654322                           135778888888987666543    23899984 667777999999


Q ss_pred             HHHHH
Q 037144          493 TVVQE  497 (502)
Q Consensus       493 ~~l~~  497 (502)
                      ..+++
T Consensus       360 ~~~~k  364 (384)
T KOG1368|consen  360 SVLSK  364 (384)
T ss_pred             HHHHH
Confidence            99954

>PLN02414 glycine dehydrogenase (decarboxylating)

Probab=99.86  E-value=6.3e-19  Score=193.54  Aligned_cols=367  Identities=11%  Similarity=0.036  Sum_probs=229.0

Q ss_pred             chhHhhcCCCCCCC--CCCCHHHHHHHHHHhhcCCCCCCCCCcccccCCCCCCHHHHHHHHHHhhcC--CCCccc--ccC
Q 037144           38 PGYLKKRLPESAPY--SPESVETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFN--VVGLDW--ISS  111 (502)
Q Consensus        38 ~~~l~~~~~~~~p~--~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n--~~~~~~--~~~  111 (502)
                      |..++.. +..+|.  .+.|..++++++.++...+..   +..|.|--.-+.-+|+.+.+.+.....  .....|  +.+
T Consensus        68 P~~i~~~-~l~lp~~~~~~sE~e~~~~~~~la~kN~~---~~~fiG~G~y~~~~P~~v~~~i~~~~~~~TaytPYqaEis  143 (993)
T PLN02414         68 PKSIRLD-SMKLSKYDEGLTESQMLEHMKSLASKNKV---FKSYIGMGYYNTHVPPVILRNILENPGWYTQYTPYQAEIA  143 (993)
T ss_pred             CHHHhcC-CCCCCCCCCCCCHHHHHHHHHHHHhcCCc---cccccCCCCCCccCCHHHHHHHHhChHHHhhcCCCchHHH
Confidence            4444322 456672  478999999999988665543   333433222222345555343332211  111223  233


Q ss_pred             hhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHH
Q 037144          112 PAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKA  191 (502)
Q Consensus       112 p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a  191 (502)
                      .+.-+.-.+...++++|+|++.+       +..++.++|.+.-.+++ +...  .    .+ ++.+|++++..|++....
T Consensus       144 QG~lqal~~~Qt~ia~LtG~~~a-------naSL~d~aTAaaea~~~-a~~~--~----~g-~~~~VlVs~~~hP~~~~v  208 (993)
T PLN02414        144 QGRLESLLNYQTMITDLTGLPMS-------NASLLDEGTAAAEAMAM-CNNI--L----KG-KKKKFLIASNCHPQTIDV  208 (993)
T ss_pred             HHHHHHHHHHHHHHHHHhCCChh-------hEeecCChHHHHHHHHH-HHhc--c----cC-CCCEEEEcCccCHhHHHH
Confidence            44444445677899999999875       57888888876643333 3321  0    01 346799999999876543


Q ss_pred             ----HHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEE
Q 037144          192 ----AQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVH  267 (502)
Q Consensus       192 ----a~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lh  267 (502)
                          ++..|+   +++.+|.+.     .+      ...++      . +.+++.-.+.+|.+.|+++|+++|+++|++++
T Consensus       209 ~~t~a~~~Gi---eV~~v~~~~-----~~------~~~~~------v-~~vlvq~P~~~G~v~dv~~I~~~ah~~GaL~i  267 (993)
T PLN02414        209 CQTRADGLGL---EVVVADEKD-----FD------YSSGD------V-CGVLVQYPATDGEVLDYAEFVKNAHANGVKVV  267 (993)
T ss_pred             HHHhhhhcCC---EEEEecchh-----hc------cccCc------e-EEEEEecCCCCeEEcCHHHHHHHHHHcCCEEE
Confidence                455688   999998752     11      01111      1 23335556689999999999999999999999


Q ss_pred             eecccccccccCccchhhhcCCCCCCeeEEccCCcC-----CCCCcceEEEeeCchhhhhhhcCCcc-cccCccCCCCCc
Q 037144          268 VDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWL-----FTTLDCCCLWVKDPSCLLSTLSTNPQ-YLKNEATDQEPK  341 (502)
Q Consensus       268 VDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l-----~~p~~~g~~~~r~~~~l~~~~~~~~~-yl~~~~~~~~~~  341 (502)
                      | +|+..+....+....+     +||+++.++|||+     ++|. +|+++++++.  .+   ..|. .+.. ..+   .
T Consensus       268 V-aad~lal~~l~~pge~-----GADi~vgsgqKwg~P~G~GGP~-aGflavr~~~--~r---~~PgriVG~-s~d---~  331 (993)
T PLN02414        268 M-ATDLLALTMLKPPGEW-----GADIVVGSAQRFGVPMGYGGPH-AAFLATSQEY--KR---LMPGRIIGV-SVD---S  331 (993)
T ss_pred             E-EECHHHhcCCCCHhhc-----cCcEEEECCCccccCCCCCCCC-eeEEEECHHH--Hh---hCCCcccCc-ccC---C
Confidence            9 8877766665433333     8999999999998     4444 8999998753  11   2232 2221 111   0


Q ss_pred             ccccCCC---cccccCCCCC-------CchHHHHHH-----HHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCC
Q 037144          342 EQEVGYK---DWQITLCRRF-------RSLKLWVVI-----RNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRN  406 (502)
Q Consensus       342 ~~~~~~~---~~~~~~sr~~-------~al~~~~~l-----~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~  406 (502)
                      .+...+.   ....+-.||-       ...++++++     .++|..|++++.++...++.+++++|.+. |+++..++.
T Consensus       332 ~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~-G~~~~~~~~  410 (993)
T PLN02414        332 SGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKL-GFQVQSLPF  410 (993)
T ss_pred             CCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhhc-CCccCCCCC
Confidence            1111110   0011112221       112444443     34588999999999999999999999875 799988877


Q ss_pred             eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHH
Q 037144          407 FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMES  486 (502)
Q Consensus       407 ~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~  486 (502)
                      +.+|+|+.. .                              ..++.++|.++|+. +..  .. ...+|+|+. ..++++
T Consensus       411 f~~vt~~~~-~------------------------------~~~v~~~L~~~gI~-l~~--~~-~~~lrvs~~-e~~T~e  454 (993)
T PLN02414        411 FDTVKVKCS-D------------------------------ADAIADAAAKVGIN-LRV--VD-ANTVTVSFD-ETTTLE  454 (993)
T ss_pred             cCeEEEecC-C------------------------------HHHHHHHHHHCCCe-eEE--ec-CCeEEEEee-ccCCHH
Confidence            889998863 1                              24667777777873 222  11 246999986 567788


Q ss_pred             HHHHHHHHHHH
Q 037144          487 HVRAAWTVVQE  497 (502)
Q Consensus       487 di~~~~~~l~~  497 (502)
                      |||+++++|..
T Consensus       455 dId~L~~~l~~  465 (993)
T PLN02414        455 DVDKLFKVFAG  465 (993)
T ss_pred             HHHHHHHHHcc
Confidence            99999999963

>TIGR01366 serC_3 phosphoserine aminotransferase, putative

Probab=99.86  E-value=4.4e-20  Score=186.21  Aligned_cols=309  Identities=12%  Similarity=0.016  Sum_probs=198.4

Q ss_pred             cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEc-CCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCch-h
Q 037144          110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQ-GTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHC-A  187 (502)
Q Consensus       110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t-~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~-s  187 (502)
                      -++.+.++-+++.+.+++++|.+++.      ..+|+ +|||.++..++.....           ++ .++++...|. .
T Consensus        35 r~~~f~~~~~~~r~~l~~l~~~~~~~------~v~f~~gs~T~a~~~~~~~l~~-----------~~-~l~i~~G~~~~~   96 (361)
T TIGR01366        35 RQAPVKNLVGRVREGLAELFSLPDGY------EVILGNGGATAFWDAATFGLIE-----------KK-SLHLSFGEFSSK   96 (361)
T ss_pred             CChHHHHHHHHHHHHHHHHhCCCCCc------eEEEECCchhHHHHHHHHhccc-----------cc-ccEEecCHHHHH
Confidence            45677888889999999999996542      56664 6699888766654421           12 2233333443 3


Q ss_pred             HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEE
Q 037144          188 FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVH  267 (502)
Q Consensus       188 ~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lh  267 (502)
                      +.+.+....... +++.++.++.+  .++.     .+.++      +.+|++++.+|.+|.+.|+++|   ++++|++++
T Consensus        97 ~~~~a~~~~~~~-~~~~~~~~~~~--~~~~-----~~~~~------~~lV~~~h~et~tG~~~pi~~I---~~~~g~~~i  159 (361)
T TIGR01366        97 FAKAVKLAPWLG-EPIIVTADPGS--APEP-----QADPG------VDVIAWAHNETSTGVAVPVRRP---EGSDDALVV  159 (361)
T ss_pred             HHHHHHhhhccC-CceEEecCCCC--CCCC-----ccCCC------CCEEEEcccCCccceecccccc---cccCCCeEE
Confidence            555666543211 67788876532  3333     22222      4489999999999999999998   588999999


Q ss_pred             eecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcC--C----cccccCccCCCCCc
Q 037144          268 VDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLST--N----PQYLKNEATDQEPK  341 (502)
Q Consensus       268 VDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~--~----~~yl~~~~~~~~~~  341 (502)
                      ||++++.+..+++-.        .+|++++++||+++.|.|.++++++++.. .+....  .    +.|+....      
T Consensus       160 VDavqs~g~~~idv~--------~~D~~~~s~~K~lg~~~Gl~~~~~s~~~~-~~~~~~~~~~~~~p~~~d~~~------  224 (361)
T TIGR01366       160 IDATSGAGGLPVDIA--------ETDVYYFAPQKNFASDGGLWLAIMSPAAL-ERIEAIAASGRWVPEFLSLPT------  224 (361)
T ss_pred             EEcCccccCCCCCHH--------HCCEEEEEchhhcCCCCceEEEEECHHHH-hhhhcccCCCCCCchhhhHHH------
Confidence            999998888776532        48999999999999988877777776533 111110  0    11221100      


Q ss_pred             ccccCCCcccccCCCCC-----CchHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-C--CeeE-EE
Q 037144          342 EQEVGYKDWQITLCRRF-----RSLKLWVVIRNFGVA-NLRNFIRSHVGMAKLFERLVTSDKRFEVAFP-R--NFSL-VC  411 (502)
Q Consensus       342 ~~~~~~~~~~~~~sr~~-----~al~~~~~l~~~g~~-g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~-~--~~~~-v~  411 (502)
                           ......+.+.+.     ..+++..+++.+..+ |++.+.+++.++++++++.+.+.++++++.+ +  .+++ .+
T Consensus       225 -----~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~~  299 (361)
T TIGR01366       225 -----AVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVGT  299 (361)
T ss_pred             -----HHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceEE
Confidence                 000001111111     113666778877666 6899999999999999999999976776532 1  1222 23


Q ss_pred             EEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHH
Q 037144          412 FRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAA  491 (502)
Q Consensus       412 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~  491 (502)
                      +.+ +.+.                           ....+.+.|.++|.....+...-+...+|++++++ ++++||+++
T Consensus       300 v~~-~~g~---------------------------~~~~v~~~L~~~gI~i~~~~~~l~~~~vRis~~~~-~t~~di~~l  350 (361)
T TIGR01366       300 IDF-VDDI---------------------------DAATVAKILRANGIVDTEPYRKLGRNQLRVAMFPA-IDPDDVEAL  350 (361)
T ss_pred             EEC-CCcc---------------------------CHHHHHHHHHHCCCeeccCccccCCCcEEEEcCCC-CCHHHHHHH
Confidence            333 2221                           13456677767787543322111345899999864 667799999


Q ss_pred             HHHHHHHHHhC
Q 037144          492 WTVVQEHLEAF  502 (502)
Q Consensus       492 ~~~l~~~~~~~  502 (502)
                      +++|+++++++
T Consensus       351 ~~al~~~~~~~  361 (361)
T TIGR01366       351 TECVDWVVERL  361 (361)
T ss_pred             HHHHHHHHhhC
Confidence            99999988764

This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.

>TIGR03537 DapC succinyldiaminopimelate transaminase

Probab=99.86  E-value=4.5e-19  Score=178.87  Aligned_cols=325  Identities=13%  Similarity=0.054  Sum_probs=206.6

Q ss_pred             HHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCC-cEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144           91 GIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNG-GGVIQGTTCEALLCTLTAARDRVLKKIG  169 (502)
Q Consensus        91 ~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~-~g~~t~ggt~a~~~al~~a~~~~~~~~~  169 (502)
                      ..+.+.+..... ....|....+...+++.+.+|+.+.+|.+.+.     . ..++|+|+++++..++.+..+.      
T Consensus        16 ~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~-----~~~Iiit~Gs~~ai~~~~~~~~~~------   83 (350)
T TIGR03537        16 PFIRKALIDAVP-EVSQYPSALGTKALREAISGWFERRFGVKLDP-----DAQVLPSAGSKEAIFHFPLVFIDP------   83 (350)
T ss_pred             HHHHHHHHHHHh-ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC-----CCcEEEcCChHHHHHHHHHHHcCC------
Confidence            334445444432 23456555567889999999999988864321     2 5899999999887665544321      


Q ss_pred             ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144          170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV  249 (502)
Q Consensus       170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i  249 (502)
                        |.+++.|+++.++|..+..+++.+|+   +++.+|++.++++.+|++++++++.+++      .+|+++.++|+||.+
T Consensus        84 --g~~~d~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~~~~~~------~~i~i~~p~NPtG~~  152 (350)
T TIGR03537        84 --EEDRRRVIFGTPGYPVYERGALFAGG---EPTAVKLKKEDGFLLRLEKVEKSILEET------KIVWINYPHNPTGAT  152 (350)
T ss_pred             --CCCCceEEEcCCCCcchHHHHHhcCC---EEEEcccCcccCCccCHHHHHHhhhhcc------EEEEEeCCCCCcCcc
Confidence              11236888899999999999999999   9999999754457799999999987643      367788899999998


Q ss_pred             CC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCC-CCeeEEccCCcCCCC-CcceEEEeeCchhhhhhh
Q 037144          250 DP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEC-VDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTL  324 (502)
Q Consensus       250 dp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~-aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~  324 (502)
                      -|   +++|+++|++||+++++|.+|+......+ ... +..... -..+..+++|.++.| ...|+++ .++.... .+
T Consensus       153 ~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~-~~~-~~~~~~~~~i~~~s~SK~~g~~GlRiG~~~-~~~~~~~-~~  228 (350)
T TIGR03537       153 APRSYLKETIAMCREHGIILCSDECYTEIYFGEP-PHS-ALEVGIENVLAFHSLSKRSGMTGYRSGFVA-GDEKLIS-FL  228 (350)
T ss_pred             cCHHHHHHHHHHHHHcCcEEEEeccccccccCCC-CCc-hhhcCcCCEEEEeecccccCCccccceeee-cCHHHHH-HH
Confidence            77   88999999999999999999975433211 111 111111 124455799998654 4466665 3443322 22


Q ss_pred             cCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q 037144          325 STNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF-GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAF  403 (502)
Q Consensus       325 ~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~  403 (502)
                      .....+..                     .+.  ..+...++...+ ..+.+.+..+++.++.+.+.+.|++. ++++. 
T Consensus       229 ~~~~~~~~---------------------~~~--~~~~q~~~~~~l~~~~~~~~~r~~l~~~~~~~~~~l~~~-g~~~~-  283 (350)
T TIGR03537       229 RKLRANFG---------------------VAS--PDFVQAAAKAAWSDDNHVLERRKIFKRKRDLFIEFFNKV-GLEYL-  283 (350)
T ss_pred             HHHHHhhc---------------------cCC--CHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHC-CCccc-
Confidence            11111110                     000  111111222222 23455667777888888899999887 77765 


Q ss_pred             CCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC--CEEEEEEEecCC
Q 037144          404 PRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG--GIYVLRFAAGNS  481 (502)
Q Consensus       404 ~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lR~~~~~~  481 (502)
                      +|..+.+.|...+...                           ...++.+.|.++|..+.++..+.  +..++|++++  
T Consensus       284 ~~~g~~~~~~~~~~~~---------------------------~~~~l~~~L~~~gv~v~~g~~f~~~~~~~~Ri~~~--  334 (350)
T TIGR03537       284 YPDATFYLWVKVPSGI---------------------------DAKDYALRLLENGIVVAPGENFGSGEEGYVRVALV--  334 (350)
T ss_pred             CCCeEEEEEEECCCCC---------------------------CHHHHHHHHHHCCEEEcCchhhCCCCCCEEEEEec--
Confidence            5555554433223211                           02466777777786555444442  2578999985  


Q ss_pred             CCcHHHHHHHHHHHHH
Q 037144          482 MTMESHVRAAWTVVQE  497 (502)
Q Consensus       482 ~t~~~di~~~~~~l~~  497 (502)
                       .++++++++++.+++
T Consensus       335 -~~~~~~~~~l~~~~~  349 (350)
T TIGR03537       335 -PTLEECEEALRLWER  349 (350)
T ss_pred             -CCHHHHHHHHHHHhc
Confidence             356789999888765

Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.

>PRK13392 5-aminolevulinate synthase; Provisional

Probab=99.86  E-value=4.9e-19  Score=182.46  Aligned_cols=296  Identities=11%  Similarity=0.083  Sum_probs=189.5

Q ss_pred             HHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCC
Q 037144          119 NIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGID  198 (502)
Q Consensus       119 ~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg  198 (502)
                      .++.+.+++++|.+.         .+++++|++||..++......         .++++|+++...|.++..+++..|. 
T Consensus        94 ~~Le~~la~~~g~~~---------~i~~~sG~~a~~~~i~~l~~~---------~~g~~vi~~~~~h~s~~~~~~~~g~-  154 (410)
T PRK13392         94 VLLERELADLHGKES---------ALLFTSGYVSNDAALSTLGKL---------LPGCVILSDALNHASMIEGIRRSGA-  154 (410)
T ss_pred             HHHHHHHHHHhCCCC---------EEEECcHHHHHHHHHHHHhcC---------CCCCEEEEehhhhHHHHHHHHHcCC-
Confidence            355567888888642         466667788887777643221         0456788888899999888888888 


Q ss_pred             CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccccccccc
Q 037144          199 RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACI  278 (502)
Q Consensus       199 ~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~  278 (502)
                        +++.++.+       |.+.+++.++...  ..++.+|+++.+++++|.+-|+++|.++|++||+++++|+||+.+.+.
T Consensus       155 --~~~~~~~~-------d~~~l~~~l~~~~--~~~t~~v~i~~~~n~tG~~~~l~~i~~l~~~~~~~livDea~~~g~~g  223 (410)
T PRK13392        155 --EKQVFRHN-------DLADLEEQLASVD--PDRPKLIAFESVYSMDGDIAPIEAICDLADRYNALTYVDEVHAVGLYG  223 (410)
T ss_pred             --eEEEEeCC-------CHHHHHHHHHhcc--CCCCEEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCccccCcC
Confidence              87777532       5667777775432  123558889999999999999999999999999999999999844431


Q ss_pred             Cccchhhh--cC-CCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCC
Q 037144          279 CPEFRHFI--DG-VECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLC  355 (502)
Q Consensus       279 ~~~~~~~~--~~-~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~s  355 (502)
                       +......  .+ .++.|.++.+++|+++.+.  |++.. ++...........+|......                   
T Consensus       224 -~~g~g~~~~~~~~~~~div~~tlsK~~g~~G--G~~~~-~~~~~~~l~~~~~~~~~s~~~-------------------  280 (410)
T PRK13392        224 -ARGGGIAERDGLMDRIDMIQGTLAKAFGCLG--GYIAA-SADLIDFVRSFAPGFIFTTAL-------------------  280 (410)
T ss_pred             -CCCCchhhhccCCCCCcEEEEEChHhhhccc--chhhc-CHHHHHHHHHhCcchhccCcC-------------------
Confidence             2111111  11 2357888889999998653  44443 443332211222222221100                   


Q ss_pred             CCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccc
Q 037144          356 RRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQY  435 (502)
Q Consensus       356 r~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~  435 (502)
                      .+..+.++..+++.+.  ......+++.++++++++.|++. |+++. ++..+++.+.+..                   
T Consensus       281 ~~~~~~a~~aaL~~~~--~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~i~~~~-------------------  337 (410)
T PRK13392        281 PPAVAAGATAAIRHLK--TSQTERDAHQDRVAALKAKLNAN-GIPVM-PSPSHIVPVMVGD-------------------  337 (410)
T ss_pred             CHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHc-CCCCC-CCCCCEEEEEeCC-------------------
Confidence            0011233344555432  22345577888899999999987 78765 4566666554421                   


Q ss_pred             cccchhHhhHHHHHHHHHHHHh-cCcEEEEeee----ECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          436 RQFSEEERTNEFNRELLESINV-SGKVFMTHAI----VGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       436 ~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~----~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                               .....++.++|.+ +|.+ +.+..    ..+..++|++++.. .+++|+++++++|+++.++
T Consensus       338 ---------~~~~~~~~~~L~~~~GI~-v~~~~~p~~~~~~~~lRis~~~~-~t~edid~l~~aL~~~~~~  397 (410)
T PRK13392        338 ---------PTLCKAISDRLMSEHGIY-IQPINYPTVPRGTERLRITPTPL-HDDEDIDALVAALVAIWDR  397 (410)
T ss_pred             ---------HHHHHHHHHHHHHhCCEE-EeeeCCCCCCCCCceEEEEECCC-CCHHHHHHHHHHHHHHHHH
Confidence                     1123567777764 5754 43322    13457899998654 4556999999999988764

>PRK07681 aspartate aminotransferase; Provisional

Probab=99.86  E-value=5.3e-19  Score=181.58  Aligned_cols=327  Identities=13%  Similarity=0.040  Sum_probs=211.8

Q ss_pred             HHHHHHHHHhhcCCC-CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHh
Q 037144           90 AGIVGEMLSSGFNVV-GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKI  168 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~-~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~  168 (502)
                      +..+.+.+...++.. ...|. .++..++.+.+.+|+.+..|.+-+.    ....++|+|+++++...+.+..+      
T Consensus        47 ~~~~~~~~~~~~~~~~~~~y~-~~G~~~lr~aia~~~~~~~g~~~~~----~~~I~it~G~~~al~~~~~~~~~------  115 (399)
T PRK07681         47 ADFVREEMVHTANQKESYGYT-LSGIQEFHEAVTEYYNNTHNVILNA----DKEVLLLMGSQDGLVHLPMVYAN------  115 (399)
T ss_pred             CHHHHHHHHHHHhccccCCCC-CCCcHHHHHHHHHHHHHHhCCCCCC----CCeEEECCCcHHHHHHHHHHhCC------
Confidence            445666666555432 23333 3567889999999999888864220    01588999999988666554432      


Q ss_pred             CccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144          169 GRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA  248 (502)
Q Consensus       169 ~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~  248 (502)
                           +++.|+++.++|..+...++.+|+   +++.+|+++++.+.+|+++|++++.+.+      .+|+++.++|+||.
T Consensus       116 -----~Gd~Vlv~~P~y~~~~~~~~~~G~---~~~~v~~~~~~~~~~d~~~l~~~~~~~~------k~v~l~~P~NPTG~  181 (399)
T PRK07681        116 -----PGDIILVPDPGYTAYETGIQMAGA---TSYYMPLKKENDFLPDLELIPEEIADKA------KMMILNFPGNPVPA  181 (399)
T ss_pred             -----CCCEEEECCCCccchHHHHHhcCC---EEEEEecCCCCCCcCCHHHHHHhccccc------eEEEEeCCCCCcCc
Confidence                 678899999999999999999999   9999999865557899999999886433      37888889999999


Q ss_pred             cCC---hhHHHHHHHHhCCEEEeecccccccccCccchhhh--cCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhh
Q 037144          249 VDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFI--DGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLS  322 (502)
Q Consensus       249 idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~--~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~  322 (502)
                      +-+   +++|+++|++||+|+++|.+|+.+...........  .+...-..+..+++|.++ ....+|+++. ++.... 
T Consensus       182 ~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i~-~~~l~~-  259 (399)
T PRK07681        182 MAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMIG-NEEIVR-  259 (399)
T ss_pred             CCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccccCCccceeEEEec-CHHHHH-
Confidence            966   78889999999999999999986544221111111  111112245567999997 4466888865 443332 


Q ss_pred             hhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 037144          323 TLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSDKRFE  400 (502)
Q Consensus       323 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~~~~  400 (502)
                      .+.....+...                       ....+..+++...+  +.+.+++..+.+.++++++.+.|++. +++
T Consensus       260 ~~~~~~~~~~~-----------------------~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~  315 (399)
T PRK07681        260 ALTQFKSNTDY-----------------------GVFLPIQKAACAALRNGAAFCEKNRGIYQERRDTLVDGFRTF-GWN  315 (399)
T ss_pred             HHHHHHhhccc-----------------------CCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCc
Confidence            22111111000                       00122223333333  34556777777888889999999987 787


Q ss_pred             EecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh-cCcEEEEeeeEC--CEEEEEEE
Q 037144          401 VAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV-SGKVFMTHAIVG--GIYVLRFA  477 (502)
Q Consensus       401 l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--g~~~lR~~  477 (502)
                      +..+.....+++++++ ..                           ...++.+++.+ .|..+.++..+.  +..++|++
T Consensus       316 ~~~p~~g~f~~~~l~~-~~---------------------------~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis  367 (399)
T PRK07681        316 VDKPAGSMFVWAEIPK-GW---------------------------TSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIA  367 (399)
T ss_pred             ccCCCeeeEEEEECCC-CC---------------------------CHHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEE
Confidence            6534333333444432 11                           02356666665 576554443332  34699999


Q ss_pred             ecCCCCcHHHHHHHHHHHHHH
Q 037144          478 AGNSMTMESHVRAAWTVVQEH  498 (502)
Q Consensus       478 ~~~~~t~~~di~~~~~~l~~~  498 (502)
                      ++.   ++++++++++.|++.
T Consensus       368 ~~~---~~~~~~~~l~~l~~~  385 (399)
T PRK07681        368 LVQ---DEEVLQQAVENIRNS  385 (399)
T ss_pred             ecC---CHHHHHHHHHHHHHh
Confidence            972   567999999999874

>PRK07777 aminotransferase; Validated

Probab=99.86  E-value=3e-19  Score=182.75  Aligned_cols=330  Identities=11%  Similarity=0.035  Sum_probs=212.8

Q ss_pred             HHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccC
Q 037144           93 VGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGREN  172 (502)
Q Consensus        93 ~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~  172 (502)
                      +.+.+...+......|...++..++++.+.+|+.+.+|.+...    ....++|+|+++++..++.+...          
T Consensus        42 ~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~----~~~i~~t~G~~~al~~~~~~~~~----------  107 (387)
T PRK07777         42 MLEAAQEAIAGGVNQYPPGPGIPELRAAIAAQRRRRYGLEYDP----DTEVLVTVGATEAIAAAVLGLVE----------  107 (387)
T ss_pred             HHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCcEEEeCCcHHHHHHHHHHhcC----------
Confidence            3344444443334457666778899999999999998875321    01488999999998766654322          


Q ss_pred             CCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCC-CCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc--
Q 037144          173 ISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKS-SSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV--  249 (502)
Q Consensus       173 ~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~-~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i--  249 (502)
                       +++.|++....|..+..+++..|.   +++.++.+++ .++.+|+++|++++.+.+      .+|+++.++|+||.+  
T Consensus       108 -~gd~vli~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~d~~~l~~~~~~~~------~~v~l~~p~NPtG~~~~  177 (387)
T PRK07777        108 -PGDEVLLIEPYYDSYAAVIAMAGA---HRVPVPLVPDGRGFALDLDALRAAVTPRT------RALIVNSPHNPTGTVLT  177 (387)
T ss_pred             -CCCEEEEeCCCchhhHHHHHHCCC---EEEEeecCCccCCCcCCHHHHHHhcCccc------EEEEEcCCCCCCCccCC
Confidence             567788888889888899999999   9999999764 357899999999886533      367788899999997  


Q ss_pred             -CChhHHHHHHHHhCCEEEeecccccccccCccchhh--hcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhc
Q 037144          250 -DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF--IDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLS  325 (502)
Q Consensus       250 -dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~  325 (502)
                       +++++|.++|++|++++++|.+|+...+....+...  +.+....+.+..+++|.++.| ..+|+++..+ ..+ +.+.
T Consensus       178 ~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~-~l~-~~~~  255 (387)
T PRK07777        178 AAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGWACGPA-PLI-AAVR  255 (387)
T ss_pred             HHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCceeEEEecCH-HHH-HHHH
Confidence             458899999999999999999997654422111111  122234567788899999854 4578776543 222 2221


Q ss_pred             CCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC
Q 037144          326 TNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR  405 (502)
Q Consensus       326 ~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~  405 (502)
                      ....+....                   .+ ......+-.++. .+.+.+++..+.+.++++++.+.|++. ++++. ++
T Consensus       256 ~~~~~~~~~-------------------~~-~~~q~~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~  312 (387)
T PRK07777        256 AAKQYLTYV-------------------GG-APFQPAVAHALD-HEDAWVAALRDSLQAKRDRLAAGLAEA-GFEVH-DS  312 (387)
T ss_pred             HHHhhcccC-------------------CC-CHHHHHHHHHHh-CCcHHHHHHHHHHHHHHHHHHHHHHhC-CCCcc-CC
Confidence            111111100                   00 001111111121 245666777888889999999999887 77765 45


Q ss_pred             CeeEEEE-EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh-cCcEEEEeeeEC-----CEEEEEEEe
Q 037144          406 NFSLVCF-RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV-SGKVFMTHAIVG-----GIYVLRFAA  478 (502)
Q Consensus       406 ~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~-----g~~~lR~~~  478 (502)
                      +.+++.| ++.+...                          ....++.+++.+ .|..+.++..+.     +..++|+++
T Consensus       313 ~g~~~~~~~~~~~~~--------------------------~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~  366 (387)
T PRK07777        313 AGTYFLCADPRPLGY--------------------------DDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAF  366 (387)
T ss_pred             CcceEEEecccccCC--------------------------CCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEe
Confidence            5454444 4332110                          002456677754 466544443332     245899998


Q ss_pred             cCCCCcHHHHHHHHHHHHHHHH
Q 037144          479 GNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       479 ~~~~t~~~di~~~~~~l~~~~~  500 (502)
                      +.   ++++++++++.|.++..
T Consensus       367 ~~---~~~~l~~~l~~l~~~~~  385 (387)
T PRK07777        367 CK---RDDTLDEAIRRLRALRG  385 (387)
T ss_pred             cC---CHHHHHHHHHHHHHHhc
Confidence            63   57799999999987653

>PRK05367 glycine dehydrogenase; Provisional

Probab=99.86  E-value=6.3e-19  Score=194.53  Aligned_cols=365  Identities=13%  Similarity=0.095  Sum_probs=227.1

Q ss_pred             chhHhhcCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCcccccCCCCCCHHHHHHHHHHh------hcCCCCcccccC
Q 037144           38 PGYLKKRLPESAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSS------GFNVVGLDWISS  111 (502)
Q Consensus        38 ~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~------~~n~~~~~~~~~  111 (502)
                      |..++..-+..+|+ +.+..++++++.++...|..   ...|.|--.-+...|.++.+-+.+      .+-+++..  .+
T Consensus        43 P~~i~~~~~l~lp~-~~sE~e~~~~~~~la~~N~~---~~~~ig~G~y~~~~P~vi~~~i~~~~~~~t~ytPyQ~E--is  116 (954)
T PRK05367         43 PASIRLAEPLDLPA-ALSEAEALAELRAIASKNKV---FRSYIGQGYYGTHTPPVILRNILENPAWYTAYTPYQPE--IS  116 (954)
T ss_pred             CHHHhcCCCCCCCC-CCCHHHHHHHHHHHHhcCCC---CCcccCCCCCCCcCcHHHHHHHHhCcchhhccCCCChH--HH
Confidence            55665444556775 58999999999988666543   234444322223455555332221      11222222  33


Q ss_pred             hhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHH-
Q 037144          112 PAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQK-  190 (502)
Q Consensus       112 p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~-  190 (502)
                      -+.-+.-.+...++++++|++..       +..++.++|.+.- ++..++... +     + ++.+|++++..|++... 
T Consensus       117 QG~Leal~~~Qt~la~LtG~~~a-------naSl~d~aTAa~e-a~~~a~~~~-~-----~-~~~~vlv~~~~hP~~~~v  181 (954)
T PRK05367        117 QGRLEALLNFQTMVADLTGLEIA-------NASLLDEATAAAE-AMALAKRVS-K-----S-KSNRFFVDDDVHPQTLDV  181 (954)
T ss_pred             HHHHHHHHHHHHHHHHHHCCChh-------hccccccHHHHHH-HHHHhhhhc-c-----C-CCCEEEEcCccCHHHHHH
Confidence            34444444567899999999865       5678888886654 444443321 0     0 13689999999987553 


Q ss_pred             ---HHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEE
Q 037144          191 ---AAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVH  267 (502)
Q Consensus       191 ---aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lh  267 (502)
                         .++..|+   +|+.+|.+.+    ++        .++      .+.| +..-.+.+|.+.|+++|+++||++|++++
T Consensus       182 ~~t~a~~~G~---ev~~~~~~~d----~~--------~~~------~~~v-lvq~p~~~G~i~d~~~i~~~ah~~Gal~~  239 (954)
T PRK05367        182 LRTRAEPLGI---EVVVGDAAKA----LD--------HDD------VFGV-LLQYPGTSGEVRDYTALIAAAHARGALVA  239 (954)
T ss_pred             HHHHHHhCCC---EEEEecCccC----CC--------ccc------EEEE-EEecCCCCeeeccHHHHHHHHHHcCCEEE
Confidence               4567899   9999997531    11        111      2334 44446799999999999999999999999


Q ss_pred             eecccccccccCccchhhhcCCCCCCeeEEccCCcC-----CCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcc
Q 037144          268 VDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWL-----FTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKE  342 (502)
Q Consensus       268 VDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l-----~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~  342 (502)
                      ||+.+.+..+..+ ....     +||+++.+.|||+     ++| ++|++++|+..  .+.+   ++-+.....+   ..
T Consensus       240 vda~~~Al~~l~~-pge~-----GaDi~vgs~qkfg~P~g~GGP-~aGflavr~~~--~r~l---pgrivG~s~d---~~  304 (954)
T PRK05367        240 VAADLLALTLLTP-PGEM-----GADIAVGSAQRFGVPMGFGGP-HAAYFAVRDAY--KRSM---PGRIVGVSVD---AA  304 (954)
T ss_pred             EEehhhhccCCCC-hhhc-----CCCEEEeeCcccCCCCCCCCC-CEEEEEECHHH--HhhC---CCCeeeeecc---cC
Confidence            9996644333332 2222     8999999999994     444 49999998652  2222   2222111111   00


Q ss_pred             cccCCC--cccc-cCCCCCCc----------hHHH--HHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCe
Q 037144          343 QEVGYK--DWQI-TLCRRFRS----------LKLW--VVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNF  407 (502)
Q Consensus       343 ~~~~~~--~~~~-~~sr~~~a----------l~~~--~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~  407 (502)
                      +...+.  -.+- +--||-.+          +++.  +.+.++|.+|++++.++...++.+++++|++ +|+++..++.+
T Consensus       305 g~~~~~lalqtReqhiRrekaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~-~G~~~~~~~~f  383 (954)
T PRK05367        305 GNPALRLALQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRA-LGLEVVHDSFF  383 (954)
T ss_pred             CCcccccccccccccccccccccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHh-cCcccCCCCCC
Confidence            111010  0011 11123211          1122  2235579999999999999999999999987 58998877777


Q ss_pred             eEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHH
Q 037144          408 SLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESH  487 (502)
Q Consensus       408 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~d  487 (502)
                      .+++|+....                              ..++.+++.++|+.. ..   .....+|+|++ ..++++|
T Consensus       384 ~~~~~~~~~~------------------------------~~~i~~~l~~~gi~~-~~---~~~~~l~is~~-e~~t~~d  428 (954)
T PRK05367        384 DTLTVEVGGD------------------------------AAAVLARALAAGINL-RR---VDDDHVGISLD-ETTTRED  428 (954)
T ss_pred             CeEEEeCCCC------------------------------HHHHHHHHHHCCcee-cc---ccCCEEEEEec-ccCCHHH
Confidence            8888875311                              346777787888643 11   11346999986 5577889


Q ss_pred             HHHHHHHHH
Q 037144          488 VRAAWTVVQ  496 (502)
Q Consensus       488 i~~~~~~l~  496 (502)
                      |+++++++.
T Consensus       429 id~l~~~l~  437 (954)
T PRK05367        429 LAALLAVFG  437 (954)
T ss_pred             HHHHHHHHc
Confidence            999999996

>PRK08912 hypothetical protein; Provisional

Probab=99.85  E-value=7.8e-19  Score=179.67  Aligned_cols=315  Identities=12%  Similarity=0.050  Sum_probs=206.3

Q ss_pred             cccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCc
Q 037144          106 LDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTH  185 (502)
Q Consensus       106 ~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H  185 (502)
                      ..|....+..++++.+++|+.+.+|.+...    ....++|+|+++++..++....+           +++.|+++..+|
T Consensus        57 ~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~----~~~i~~t~G~~~al~~~~~~~~~-----------~gd~Vlv~~p~y  121 (387)
T PRK08912         57 NQYPPMMGLPELRQAVAAHYARFQGLDLDP----ETEVMVTSGATEALAAALLALVE-----------PGDEVVLFQPLY  121 (387)
T ss_pred             CCCCCCCCcHHHHHHHHHHHHHHhCCCCCC----cccEEEeCCcHHHHHHHHHHhcC-----------CCCEEEEeCCCc
Confidence            456655667889999999999888864221    01588999999988665554432           567888999999


Q ss_pred             hhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hhHHHHHHHHh
Q 037144          186 CAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LKPLCDVAKQF  262 (502)
Q Consensus       186 ~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~eI~~i~~~~  262 (502)
                      ..+..+++..|.   +++.+|++.+ ++.+|+++|++.+.+.+      .+|+++.++|+||.+-+   +++|.++|++|
T Consensus       122 ~~~~~~~~~~g~---~~~~~~~~~~-~~~~~~~~l~~~~~~~~------~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~  191 (387)
T PRK08912        122 DAYLPLIRRAGG---VPRLVRLEPP-HWRLPRAALAAAFSPRT------KAVLLNNPLNPAGKVFPREELALLAEFCQRH  191 (387)
T ss_pred             hhhHHHHHHcCC---EEEEEecCcc-cCcCCHHHHHHHhCccc------eEEEEeCCCCCcCcccCHHHHHHHHHHHHHC
Confidence            999999999999   9999998743 47899999999886433      36777899999999865   77799999999


Q ss_pred             CCEEEeecccccccccCccchhh--hcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcccccCccCCCC
Q 037144          263 GIWVHVDAAYAGSACICPEFRHF--IDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQE  339 (502)
Q Consensus       263 g~~lhVDaA~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~  339 (502)
                      ++++++|.+|+...+........  +.+...-+.+..+++|.++ ....+|+++.. +.... .+........       
T Consensus       192 ~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~-~~~~~-~l~~~~~~~~-------  262 (387)
T PRK08912        192 DAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCAA-PPLLR-VLAKAHQFLT-------  262 (387)
T ss_pred             CeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCceeEEEecC-HHHHH-HHHHHHhhcc-------
Confidence            99999999997654321111111  1222234577888999997 44557888764 33322 2211100000       


Q ss_pred             CcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEE-EEeec
Q 037144          340 PKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVC-FRVTP  416 (502)
Q Consensus       340 ~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~-f~~~~  416 (502)
                                ++  .    .+....++...+  ..+.+++..++..++++++.+.|++. ++++. ++..+.+. +.+++
T Consensus       263 ----------~~--~----~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~g~~~l~~~l~~  324 (387)
T PRK08912        263 ----------FT--T----PPNLQAAVAYGLGKPDDYFEGMRADLARSRDRLAAGLRRI-GFPVL-PSQGTYFLTVDLAP  324 (387)
T ss_pred             ----------cc--C----ChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCccc-CCCcceEEEecccc
Confidence                      00  0    111111222222  23456777888889999999999987 77765 45555443 44432


Q ss_pred             CcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeEC----CEEEEEEEecCCCCcHHHHHHH
Q 037144          417 SAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVG----GIYVLRFAAGNSMTMESHVRAA  491 (502)
Q Consensus       417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~----g~~~lR~~~~~~~t~~~di~~~  491 (502)
                      .+.                         .....++.+++. +.|..+.++..+.    +..++|++++.   +++.++.+
T Consensus       325 ~~~-------------------------~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~~---~~~~l~~~  376 (387)
T PRK08912        325 LGL-------------------------AEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFAK---RDATLDEA  376 (387)
T ss_pred             cCC-------------------------CCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEeC---CHHHHHHH
Confidence            110                         000235566654 4576555544442    24799999984   46799999


Q ss_pred             HHHHHHHHH
Q 037144          492 WTVVQEHLE  500 (502)
Q Consensus       492 ~~~l~~~~~  500 (502)
                      ++.|.+..+
T Consensus       377 l~rl~~~l~  385 (387)
T PRK08912        377 VERLAAARR  385 (387)
T ss_pred             HHHHHHHHh
Confidence            999988654

>cd00615 Orn_deC_like Ornithine decarboxylase family

Probab=99.85  E-value=1.4e-20  Score=185.00  Aligned_cols=171  Identities=13%  Similarity=0.046  Sum_probs=132.3

Q ss_pred             HHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCC
Q 037144          119 NIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGID  198 (502)
Q Consensus       119 ~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg  198 (502)
                      +++.+.+++++|.+..        .++|+|+|+++..++.+...           +++.|+++..+|.|+..++.+.|+ 
T Consensus        62 ~~~~~~~A~~~ga~~~--------~~~~~Gst~a~~~~l~al~~-----------~gd~Vlv~~~~h~s~~~~~~~~g~-  121 (294)
T cd00615          62 KEAQELAARAFGAKHT--------FFLVNGTSSSNKAVILAVCG-----------PGDKILIDRNCHKSVINGLVLSGA-  121 (294)
T ss_pred             HHHHHHHHHHhCCCCE--------EEEcCcHHHHHHHHHHHcCC-----------CCCEEEEeCCchHHHHHHHHHCCC-
Confidence            4455678899997642        35588889999777766543           678899999999999999999998 


Q ss_pred             CCCEEEEecCCCCC----cccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccccc
Q 037144          199 RKNIRAIKTTKSSS----YGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAG  274 (502)
Q Consensus       199 ~~~v~~v~~~~~~~----~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~  274 (502)
                        +++.++.+.+.+    +.+|++++++++++..    .+.+|+++.+ |.+|.+.|+++|+++|+++|++++||+||++
T Consensus       122 --~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~----~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~g~~livDeA~~~  194 (294)
T cd00615         122 --VPVYLKPERNPYYGIAGGIPPETFKKALIEHP----DAKAAVITNP-TYYGICYNLRKIVEEAHHRGLPVLVDEAHGA  194 (294)
T ss_pred             --EEEEecCccCcccCcCCCCCHHHHHHHHHhCC----CceEEEEECC-CCCCEecCHHHHHHHHHhcCCeEEEECcchh
Confidence              999998764332    4799999999997532    2457778876 6899999999999999999999999999987


Q ss_pred             ccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCc
Q 037144          275 SACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDP  317 (502)
Q Consensus       275 ~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~  317 (502)
                      ...+.+....... ..++|+++.++||++.++.++|++++++.
T Consensus       195 ~~~~~~~~~~~~~-~~~~div~~S~hK~l~g~~~~~~l~~~~~  236 (294)
T cd00615         195 HFRFHPILPSSAA-MAGADIVVQSTHKTLPALTQGSMIHVKGD  236 (294)
T ss_pred             hhccCcccCcchh-hcCCcEEEEchhcccchHhHHHHHHhCCC
Confidence            6543332221111 12799999999999988877888877655

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.

>PRK09082 methionine aminotransferase; Validated

Probab=99.85  E-value=2.7e-19  Score=182.86  Aligned_cols=325  Identities=10%  Similarity=0.054  Sum_probs=213.0

Q ss_pred             HHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCc
Q 037144           91 GIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGR  170 (502)
Q Consensus        91 ~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~  170 (502)
                      ..+.+.+...+......|....+..++++.+.+++.+++|.+...    ....++|+|+++++..++.+...        
T Consensus        46 ~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~----~~~i~~t~G~~~al~~~~~~~~~--------  113 (386)
T PRK09082         46 PYLVEALAYAMAAGHNQYPPMTGVAALREAIAAKTARLYGRQYDA----DSEITVTAGATEALFAAILALVR--------  113 (386)
T ss_pred             HHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC----CCcEEEeCCHHHHHHHHHHHHcC--------
Confidence            345555555554334456666678899999999999999975321    01488999999998877765432        


Q ss_pred             cCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc-
Q 037144          171 ENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV-  249 (502)
Q Consensus       171 ~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i-  249 (502)
                         +++.|+++...|.++..+++..|.   +++.+|++.. ++.+|++++++++++.      +.+|+++.++|+||.+ 
T Consensus       114 ---~gd~Vli~~p~y~~~~~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~~~~~------~~~v~l~~p~NPtG~~~  180 (386)
T PRK09082        114 ---PGDEVIVFDPSYDSYAPAIELAGG---RAVRVALQPP-DFRVDWQRFAAAISPR------TRLIILNTPHNPSGTVW  180 (386)
T ss_pred             ---CCCEEEEeCCCchhhHHHHHHcCC---EEEEEecCcc-cccCCHHHHHHhcCcc------ceEEEEeCCCCCCCcCC
Confidence               677888999999999999999999   9999999753 5799999999998653      3367788899999987 


Q ss_pred             --CChhHHHHHHHHhCCEEEeecccccccccCccchhh--hcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhh
Q 037144          250 --DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF--IDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTL  324 (502)
Q Consensus       250 --dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~  324 (502)
                        +++++|.++|++||+++++|.+|+...+........  ..+...-..+..+++|.++.| ..+|+++.. +..+. .+
T Consensus       181 ~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~~-~~l~~-~~  258 (386)
T PRK09082        181 SAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVAP-AALSA-EF  258 (386)
T ss_pred             CHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhhhhhhhhCC-HHHHH-HH
Confidence              789999999999999999999997654422111111  112222346667799999644 457777753 33322 22


Q ss_pred             cCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144          325 STNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSDKRFEVA  402 (502)
Q Consensus       325 ~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~  402 (502)
                      .....+...                       ....+..+++...+  ..+.++++.+.+.++++++.+.|++. ++++.
T Consensus       259 ~~~~~~~~~-----------------------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~  314 (386)
T PRK09082        259 RKVHQYNTF-----------------------TVNTPAQLALADYLRAEPEHYLELPAFYQAKRDRFRAALANS-RFKLL  314 (386)
T ss_pred             HHHHhhhcC-----------------------CCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhC-CCccc
Confidence            111111100                       00122222222222  35566777778888999999999885 77765


Q ss_pred             cCCCeeEEEE-Eeec-CcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeEC----CEEEEE
Q 037144          403 FPRNFSLVCF-RVTP-SAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVG----GIYVLR  475 (502)
Q Consensus       403 ~~~~~~~v~f-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~----g~~~lR  475 (502)
                       ++..+++.| +++. .+.                         +  ..++.+.+. +.|..+.++..+.    +..++|
T Consensus       315 -~~~g~~~~~~~~~~~~~~-------------------------~--~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~R  366 (386)
T PRK09082        315 -PCEGTYFQLVDYSAISDL-------------------------D--DVEFCQWLTREHGVAAIPLSVFYADPFPHRLVR  366 (386)
T ss_pred             -CCCeeEEEEEeccccCCC-------------------------C--HHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEE
Confidence             556665554 4431 110                         0  234555554 3465444433332    246899


Q ss_pred             EEecCCCCcHHHHHHHHHHHHH
Q 037144          476 FAAGNSMTMESHVRAAWTVVQE  497 (502)
Q Consensus       476 ~~~~~~~t~~~di~~~~~~l~~  497 (502)
                      ++++.   +++++++.++.|++
T Consensus       367 i~~~~---~~~~l~~~~~rl~~  385 (386)
T PRK09082        367 LCFAK---QEETLDAAAERLCQ  385 (386)
T ss_pred             EEecC---CHHHHHHHHHHHhh
Confidence            99873   56789999988865

>PRK07309 aromatic amino acid aminotransferase; Validated

Probab=99.85  E-value=1.1e-18  Score=178.61  Aligned_cols=334  Identities=15%  Similarity=0.156  Sum_probs=209.8

Q ss_pred             HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144           90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG  169 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~  169 (502)
                      +..+.+.+...+......|....+..++++.+.+++...+|.+-..    ....++|+|+++++..++.+...       
T Consensus        45 ~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~----~~~i~it~G~~~al~~~~~~~~~-------  113 (391)
T PRK07309         45 PDHVKEAAKRAIDANQSHYTGMAGLLELRQAAADFVKEKYNLDYAP----ENEILVTIGATEALSASLTAILE-------  113 (391)
T ss_pred             CHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC----CCcEEEeCChHHHHHHHHHHhcC-------
Confidence            3445555554443322345555567889999999999888863210    01589999999998777665432       


Q ss_pred             ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144          170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV  249 (502)
Q Consensus       170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i  249 (502)
                          +++.|++..+.|..+...++..|+   +++.+|++.+ ++.+|++.|++++++..   ..+.+|+++.++|+||.+
T Consensus       114 ----~gd~vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~~~~~~---~~~~~i~l~~P~NPtG~~  182 (391)
T PRK07309        114 ----PGDKVLLPAPAYPGYEPIVNLVGA---EIVEIDTTEN-DFVLTPEMLEKAILEQG---DKLKAVILNYPANPTGVT  182 (391)
T ss_pred             ----CCCEEEEeCCCCcchHHHHHHcCC---EEEEEecCCc-CCcCCHHHHHHHhhccC---CCeEEEEEECCCCCCCcC
Confidence                567788888899889999999999   9999998653 46899999999986421   124477888899999987


Q ss_pred             C---ChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhc
Q 037144          250 D---PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLS  325 (502)
Q Consensus       250 d---pl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~  325 (502)
                      -   ++++|+++|++||+++++|++|+......+...........--.+..+++|.++.| ..+|+++.. +..+.... 
T Consensus       183 ~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRvG~~v~~-~~~~~~~~-  260 (391)
T PRK07309        183 YSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYLPDQTILINGLSKSHAMTGWRIGLIFAP-AEFTAQLI-  260 (391)
T ss_pred             cCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhccCCEEEEecChhhccCccceeEEEEeC-HHHHHHHH-
Confidence            4   58999999999999999999997655422111111110111125667799998744 456777654 43332221 


Q ss_pred             CCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q 037144          326 TNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAF  403 (502)
Q Consensus       326 ~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~  403 (502)
                      ....|....                       ...+...++.+.+  +........+++.+.++++.+.|++. ++++. 
T Consensus       261 ~~~~~~~~~-----------------------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~-  315 (391)
T PRK07309        261 KSHQYLVTA-----------------------ATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYIIEKMTDL-GFKII-  315 (391)
T ss_pred             HHHhhcccC-----------------------CChHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHC-CCeec-
Confidence            111121110                       0122222233333  22333445566777888899999887 67765 


Q ss_pred             CCCeeEEEE-EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeEC--CEEEEEEEec
Q 037144          404 PRNFSLVCF-RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVG--GIYVLRFAAG  479 (502)
Q Consensus       404 ~~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lR~~~~  479 (502)
                      +|..+++.| ++++ ..                         .....++.+++. +.|..+.++..+.  +..++|++++
T Consensus       316 ~p~gg~~~~~~l~~-~~-------------------------~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~  369 (391)
T PRK07309        316 KPDGAFYIFAKIPA-GY-------------------------NQDSFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYA  369 (391)
T ss_pred             CCCeeEEEEEECCC-CC-------------------------CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec
Confidence            455555444 3332 11                         000234555544 4566544443332  3579999987


Q ss_pred             CCCCcHHHHHHHHHHHHHHHHh
Q 037144          480 NSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       480 ~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      .   +.++++.+++.|.++.++
T Consensus       370 ~---~~~~l~~~i~~l~~~~~~  388 (391)
T PRK07309        370 A---SMETIKEAMKRLKEYMEE  388 (391)
T ss_pred             C---CHHHHHHHHHHHHHHHHh
Confidence            3   467999999999988765

>PRK12414 putative aminotransferase; Provisional

Probab=99.85  E-value=3.5e-19  Score=181.86  Aligned_cols=327  Identities=10%  Similarity=0.071  Sum_probs=210.0

Q ss_pred             HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144           90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG  169 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~  169 (502)
                      +..+.+.+...+......|....+..++.+.+.+|+++++|.+...    ....++|+|+++++..++.+..+       
T Consensus        44 ~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~----~~~i~it~g~~~al~~~~~~l~~-------  112 (384)
T PRK12414         44 DPALVEGVARAMRDGHNQYAPMAGIAALREALAEKTERLYGARYDP----ASEVTVIASASEGLYAAISALVH-------  112 (384)
T ss_pred             CHHHHHHHHHHHHhCCCCcCCCCCcHHHHHHHHHHHHHHhCCCCCC----CCcEEEECChHHHHHHHHHHhcC-------
Confidence            4445555544433223456666677889999999999999985210    01589999999988766655432       


Q ss_pred             ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144          170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV  249 (502)
Q Consensus       170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i  249 (502)
                          +++.|+++..+|..+...++..|+   +++.+|++++ ++.+|++.|++++++.      +.+|+++.++|+||.+
T Consensus       113 ----~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~-~~~~d~~~l~~~l~~~------~~~v~i~~p~NPTG~~  178 (384)
T PRK12414        113 ----PGDEVIYFEPSFDSYAPIVRLQGA---TPVAIKLSPE-DFRVNWDEVAAAITPR------TRMIIVNTPHNPSATV  178 (384)
T ss_pred             ----CCCEEEEeCCCccchHHHHHHcCC---EEEEEecCcc-ccccCHHHHHhhcCcc------cEEEEEcCCCCCCCcC
Confidence                677888899999898889999999   9999998753 4789999999988643      3477788999999997


Q ss_pred             ---CChhHHHHHHHHhCCEEEeecccccccccCccchhhh--cCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhh
Q 037144          250 ---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFI--DGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLST  323 (502)
Q Consensus       250 ---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~--~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~  323 (502)
                         +++++|+++|++||+|+++|++|.-..+.........  .....--.++.+++|.++ ....+|+++..+ .... .
T Consensus       179 ~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~~~-~l~~-~  256 (384)
T PRK12414        179 FSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAPA-ELMD-E  256 (384)
T ss_pred             CCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceEEEEecCH-HHHH-H
Confidence               6789999999999999999999976443211111111  111112256677999996 445678877643 3222 2


Q ss_pred             hcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144          324 LSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGV-ANLRNFIRSHVGMAKLFERLVTSDKRFEVA  402 (502)
Q Consensus       324 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~-~g~~~~~~~~~~la~~l~~~l~~~~~~~l~  402 (502)
                      +.....+..                       .....+..+++...+.. ..+.+..+.+.+.++++.+.|++. ++++.
T Consensus       257 l~~~~~~~~-----------------------~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~  312 (384)
T PRK12414        257 IRKVHQFMV-----------------------FSADTPMQHAFAEALAEPASYLGLGAFYQRKRDLLARELAGS-RFELL  312 (384)
T ss_pred             HHHHHhhee-----------------------cCCCcHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhC-CCeec
Confidence            211111100                       00122333333343321 234456677788889999999887 67765


Q ss_pred             cCCCeeEEEE-EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHH-HHHHhcCcEEEEeeeEC--C--EEEEEE
Q 037144          403 FPRNFSLVCF-RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELL-ESINVSGKVFMTHAIVG--G--IYVLRF  476 (502)
Q Consensus       403 ~~~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~l~~~g~~~~~~~~~~--g--~~~lR~  476 (502)
                       ++..+++.| ++.+..                     +     ....++. +.+.+.|..+.++..+.  +  ..++|+
T Consensus       313 -~~~gg~~~~~~~~~~~---------------------~-----~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRi  365 (384)
T PRK12414        313 -PSEGSFFMLARFRHFS---------------------D-----ESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRL  365 (384)
T ss_pred             -CCCcceEEEEcccccC---------------------C-----CCHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEE
Confidence             566666655 443210                     0     0012333 44455687666554442  2  468999


Q ss_pred             EecCCCCcHHHHHHHHHHHHH
Q 037144          477 AAGNSMTMESHVRAAWTVVQE  497 (502)
Q Consensus       477 ~~~~~~t~~~di~~~~~~l~~  497 (502)
                      +++.   ++++++..++.|.+
T Consensus       366 s~~~---~~~~~~~~~~rl~~  383 (384)
T PRK12414        366 SFSK---DDATLVEGARRLCS  383 (384)
T ss_pred             EecC---CHHHHHHHHHHHhh
Confidence            9973   47789998888764

>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic

Probab=99.85  E-value=2.2e-18  Score=177.18  Aligned_cols=340  Identities=11%  Similarity=0.036  Sum_probs=213.5

Q ss_pred             HHHHHHHHHHhhcCCC-CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHH
Q 037144           89 VAGIVGEMLSSGFNVV-GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKK  167 (502)
Q Consensus        89 ~~~~~~~~l~~~~n~~-~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~  167 (502)
                      ++..+.+.+...++.. ...|...++..++.+.+.+++.+. |.+-.     ....++|+|+++++..++.+...     
T Consensus        49 ~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~-~~~~~-----~~~i~~t~G~~~al~~~~~~l~~-----  117 (401)
T TIGR01264        49 TDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHNP-DGPIE-----ADDVVLCSGCSHAIEMCIAALAN-----  117 (401)
T ss_pred             CCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhhc-CCCCC-----HHHEEECcChHHHHHHHHHHhCC-----
Confidence            3455666666655443 234656667788888888888763 33211     12588999999998777665533     


Q ss_pred             hCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccc
Q 037144          168 IGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAIT  247 (502)
Q Consensus       168 ~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G  247 (502)
                            +++.|+++...+..+...++..|+   +++.++++.++++.+|++.|++++++.+      .+|+++.++|+||
T Consensus       118 ------~gd~v~i~~P~y~~~~~~~~~~g~---~v~~~~~~~~~~~~~d~~~l~~~~~~~~------~~v~~~~p~NPtG  182 (401)
T TIGR01264       118 ------AGQNILVPRPGFPLYETLAESMGI---EVKLYNLLPDKSWEIDLKQLESLIDEKT------AALIVNNPSNPCG  182 (401)
T ss_pred             ------CCCEEEEeCCCChhHHHHHHHcCC---EEEEeecCCccCCCCCHHHHHHHhccCc------eEEEEcCCCCCCC
Confidence                  566788888888888889999999   9999998755467999999999886533      3678888999999


Q ss_pred             ccC---ChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCC-eeEEccCCcC-CCCCcceEEEeeCch-hhh
Q 037144          248 AVD---PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVD-SFSFNPHKWL-FTTLDCCCLWVKDPS-CLL  321 (502)
Q Consensus       248 ~id---pl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aD-si~~~~hK~l-~~p~~~g~~~~r~~~-~l~  321 (502)
                      .+-   ++++|+++|+++|+++++|.+|..+............-..... .++.++.|.+ .....+|+++..++. .+.
T Consensus       183 ~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~iv~~~~~~~~~  262 (401)
T TIGR01264       183 SVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKRWLVPGWRLGWIIIHDRRGILR  262 (401)
T ss_pred             CCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEccCcccCCCccceEEEEEecCcchhHH
Confidence            984   5889999999999999999999765532211111111011112 4556799974 555678888875421 111


Q ss_pred             hhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 037144          322 STLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF---GVANLRNFIRSHVGMAKLFERLVTSDKR  398 (502)
Q Consensus       322 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---g~~g~~~~~~~~~~la~~l~~~l~~~~~  398 (502)
                      +.+..... +....              ++      ...+...++...+   ..+.+++.++++.+.++++.+.|+++++
T Consensus       263 ~~~~~~~~-~~~~~--------------~~------~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~  321 (401)
T TIGR01264       263 DIRDGLVK-LSQRI--------------LG------PCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAVPG  321 (401)
T ss_pred             HHHHHHHH-Hhhcc--------------CC------CCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            11110000 00000              00      0122222222222   2466777888888899999999998877


Q ss_pred             eEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeECCEEEEEEE
Q 037144          399 FEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVGGIYVLRFA  477 (502)
Q Consensus       399 ~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lR~~  477 (502)
                      +....+.....+.+++......                   +    .....++.+++. +.|..+.++..+...+++|++
T Consensus       322 ~~~~~p~~g~f~~~~~~~~~~~-------------------~----~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~iRis  378 (401)
T TIGR01264       322 LRPVMPSGAMYMMVGIEMEHFP-------------------E----FKNDVEFTERLVAEQSVFCLPGSCFEYPGFFRVV  378 (401)
T ss_pred             CcccCCCeeeEEEEEecccccC-------------------C----CCCHHHHHHHHHHhCCEEEeCchhcCCCCeEEEE
Confidence            7654343444444444321000                   0    000235566665 567765555445446799999


Q ss_pred             ecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          478 AGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       478 ~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      ++.   ++++++.+++.|.+.+++
T Consensus       379 ~~~---~~~~l~~~l~rl~~~~~~  399 (401)
T TIGR01264       379 LTV---PVVMMEEACSRIQEFCER  399 (401)
T ss_pred             EcC---CHHHHHHHHHHHHHHHhc
Confidence            973   467999999999888765

This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.

>PRK06225 aspartate aminotransferase; Provisional

Probab=99.85  E-value=4.1e-19  Score=181.25  Aligned_cols=324  Identities=11%  Similarity=0.086  Sum_probs=199.6

Q ss_pred             HHHHHHHHHhhcCCC-CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHh
Q 037144           90 AGIVGEMLSSGFNVV-GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKI  168 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~-~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~  168 (502)
                      +..+.+.+...++.. ...|....+..    ++++++++++|++..       ..++|+|+|+++..++.+...      
T Consensus        43 ~~~~~~a~~~~~~~~~~~~y~~~~g~~----~lr~~ia~~l~~~~~-------~v~~~~g~t~al~~~~~~~~~------  105 (380)
T PRK06225         43 HEEVREAMIRCIEEGEYCKYPPPEGFP----ELRELILKDLGLDDD-------EALITAGATESLYLVMRAFLS------  105 (380)
T ss_pred             CHHHHHHHHHHHhcCCCCCCCCCcchH----HHHHHHHHhcCCCCC-------cEEEeCCHHHHHHHHHHHhcC------
Confidence            344555665555432 22332222223    355667788888654       589999999998877766532      


Q ss_pred             CccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCC-CCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccc
Q 037144          169 GRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTK-SSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAIT  247 (502)
Q Consensus       169 ~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~-~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G  247 (502)
                           +++.|++++..|..+..+++..|.   +++.+|++. .+++.+|+++|++++.+.+      .+|+++.++|++|
T Consensus       106 -----~gd~vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~d~~~l~~~~~~~~------~~v~l~~p~NptG  171 (380)
T PRK06225        106 -----PGDNAVTPDPGYLIIDNFASRFGA---EVIEVPIYSEECNYKLTPELVKENMDENT------RLIYLIDPLNPLG  171 (380)
T ss_pred             -----CCCEEEEcCCCCcchHHHHHHhCc---eEEeeccccccCCccCCHHHHHhhcCCCc------eEEEEeCCCCCCC
Confidence                 456778888888888888899999   999999753 2346899999999886543      3677778899999


Q ss_pred             cc---CChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhh
Q 037144          248 AV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLST  323 (502)
Q Consensus       248 ~i---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~  323 (502)
                      .+   +++++|+++|+++|+++++|++|+.+....+.... +  ......+..+++|+++.| ..+|+++.+ +.... .
T Consensus       172 ~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~-~--~~~~~i~~~s~SK~~g~~G~RiG~i~~~-~~l~~-~  246 (380)
T PRK06225        172 SSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREHTLAAE-Y--APEHTVTSYSFSKIFGMAGLRIGAVVAT-PDLIE-V  246 (380)
T ss_pred             cCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccCCchhh-c--CCCCEEEEeechhhcCCccceeEEEecC-HHHHH-H
Confidence            97   45999999999999999999998654221111010 0  012335566789999644 447888874 33322 2


Q ss_pred             hcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe-
Q 037144          324 LSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA-  402 (502)
Q Consensus       324 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~-  402 (502)
                      +..   +....               ++   ........+..++.. ..+.++...+...++++.+.+.|++++++.+. 
T Consensus       247 ~~~---~~~~~---------------~~---~~~~~~~~a~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~  304 (380)
T PRK06225        247 VKS---IVIND---------------LG---TNVIAQEAAIAGLKV-KDEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPV  304 (380)
T ss_pred             HHH---HHhcc---------------cC---CCHHHHHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHHhCcCCcccc
Confidence            211   10000               00   000011111222222 22334444555666777888888887776432 


Q ss_pred             cCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeE---CCEEEEEEEec
Q 037144          403 FPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIV---GGIYVLRFAAG  479 (502)
Q Consensus       403 ~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~---~g~~~lR~~~~  479 (502)
                      .++..+++.+.+.+...                         +  ..++.+++.+.|..+.++..+   .+..++|+++.
T Consensus       305 ~~~~g~~~~~~~~~~~~-------------------------~--~~~l~~~l~~~gi~v~~g~~~~~~~~~~~iR~s~~  357 (380)
T PRK06225        305 YPSHGNMMVIDISEAGI-------------------------D--PEDLVEYLLERKIFVRQGTYTSKRFGDRYIRVSFS  357 (380)
T ss_pred             CCCCCeEEEEEcccccC-------------------------C--HHHHHHHHHHCCEEEcCCcccCcCCCCceEEEEeC
Confidence            24455566655543211                         0  235667777778644332211   23568999986


Q ss_pred             CCCCcHHHHHHHHHHHHHHHHh
Q 037144          480 NSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       480 ~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      .   ++++++++++.|+++.++
T Consensus       358 ~---~~e~l~~~~~~l~~~~~~  376 (380)
T PRK06225        358 I---PREQVEVFCEEFPDVVET  376 (380)
T ss_pred             C---CHHHHHHHHHHHHHHHHH
Confidence            3   577999999999988764

>PRK07337 aminotransferase; Validated

Probab=99.85  E-value=1.2e-18  Score=178.45  Aligned_cols=330  Identities=14%  Similarity=0.054  Sum_probs=210.1

Q ss_pred             HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144           90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG  169 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~  169 (502)
                      +..+.+.+...+......|....+..++++.+.+|+.+.+|..-..     ...++|+|+++++..++.+..+       
T Consensus        45 ~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~-----~~i~~t~G~~~al~~~~~~l~~-------  112 (388)
T PRK07337         45 PEPVVEAAARALRRGVTQYTSALGLAPLREAIAAWYARRFGLDVAP-----ERIVVTAGASAALLLACLALVE-------  112 (388)
T ss_pred             CHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCh-----HhEEEecCcHHHHHHHHHHhcC-------
Confidence            3445566666554444456666667889999999999988863221     2688999999988766654432       


Q ss_pred             ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144          170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV  249 (502)
Q Consensus       170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i  249 (502)
                          +++.|+++.++|......++..|.   +++.+|++.++++.+|+++|++.+.+.+      .+|+++.++|+||.+
T Consensus       113 ----~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~------~~v~l~~p~NPtG~~  179 (388)
T PRK07337        113 ----RGDEVLMPDPSYPCNRHFVAAAEG---RPVLVPSGPAERFQLTAADVEAAWGERT------RGVLLASPSNPTGTS  179 (388)
T ss_pred             ----CCCEEEEeCCCchhhHHHHHHcCC---EEEEeecCCccCCcCCHHHHHhhcCccc------eEEEEECCCCCCCcC
Confidence                678899999999999898898998   9999999764568999999999886543      367778899999997


Q ss_pred             CC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeE-EccCCcCCCC-CcceEEEeeCchhhhhhh
Q 037144          250 DP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFS-FNPHKWLFTT-LDCCCLWVKDPSCLLSTL  324 (502)
Q Consensus       250 dp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~-~~~hK~l~~p-~~~g~~~~r~~~~l~~~~  324 (502)
                      -+   +++|+++|+++|+|+++|.+|....... ...... .+ ..+.++ .+++|.++.| ..+|+++..+ .... .+
T Consensus       180 ~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~-~~-~~~vi~~~S~SK~~~~~G~RiG~~~~~~-~l~~-~l  254 (388)
T PRK07337        180 IAPDELRRIVEAVRARGGFTIVDEIYQGLSYDA-APVSAL-SL-GDDVITINSFSKYFNMTGWRLGWLVVPE-ALVG-TF  254 (388)
T ss_pred             cCHHHHHHHHHHHHHCCCEEEEeccccccccCC-CCcChh-hc-cCCEEEEEechhhcCCchhheeeeecCH-HHHH-HH
Confidence            54   7888899999999999999997654321 111111 11 234554 5799999644 4578877643 2222 22


Q ss_pred             cCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc---HHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 037144          325 STNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG---VANLRNFIRSHVGMAKLFERLVTSDKRFEV  401 (502)
Q Consensus       325 ~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g---~~g~~~~~~~~~~la~~l~~~l~~~~~~~l  401 (502)
                      .....+...                       ....+..+++...+.   .+.+.+..+++.+.++++.+.|++. ++.+
T Consensus       255 ~~~~~~~~~-----------------------~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~-~~~~  310 (388)
T PRK07337        255 EKLAQNLFI-----------------------CASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALESL-GFKV  310 (388)
T ss_pred             HHHHHHhcc-----------------------CCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhc-CCcc
Confidence            111111100                       002233333333332   2446667777888889999999886 6654


Q ss_pred             ecCCCeeE-EEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeEC---CEEEEEE
Q 037144          402 AFPRNFSL-VCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVG---GIYVLRF  476 (502)
Q Consensus       402 ~~~~~~~~-v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~---g~~~lR~  476 (502)
                      ...|..++ +++.++....            +       +    .....++.+++. +.|..+.++..+.   +..++|+
T Consensus       311 ~~~p~~g~f~~~~~~~~~~------------~-------~----~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri  367 (388)
T PRK07337        311 PVMPDGAFYVYADCRGVAH------------P-------A----AGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRL  367 (388)
T ss_pred             ccCCCeeEEEEEecccccC------------C-------C----CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEE
Confidence            32344444 4444432100            0       0    000234555543 4566554444342   2479999


Q ss_pred             EecCCCCcHHHHHHHHHHHHHHH
Q 037144          477 AAGNSMTMESHVRAAWTVVQEHL  499 (502)
Q Consensus       477 ~~~~~~t~~~di~~~~~~l~~~~  499 (502)
                      +++.   ++++++..++.|.++.
T Consensus       368 ~~~~---~~~~l~~~l~rl~~~l  387 (388)
T PRK07337        368 SYAT---SMSRLEEAVARLGKLF  387 (388)
T ss_pred             EecC---CHHHHHHHHHHHHHHh
Confidence            9974   4678888888887653

>TIGR01141 hisC histidinol-phosphate aminotransferase

Probab=99.85  E-value=4.7e-19  Score=178.58  Aligned_cols=284  Identities=13%  Similarity=0.062  Sum_probs=189.0

Q ss_pred             HHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCC
Q 037144          120 IVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDR  199 (502)
Q Consensus       120 ~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~  199 (502)
                      ++++.+++++|++.+       ..++|+|+++++..++.+...           +++.|+++...|..+...++..|+  
T Consensus        58 ~lr~~ia~~~~~~~~-------~i~~~~G~~~~l~~~~~~l~~-----------~gd~v~~~~p~y~~~~~~~~~~g~--  117 (346)
T TIGR01141        58 ELKQALADYYGVDPE-------QILLGNGSDEIIELLIRAFLE-----------PGDAVLVPPPTYSMYEISAKIHGA--  117 (346)
T ss_pred             HHHHHHHHHhCcChH-------HEEEcCCHHHHHHHHHHHhcC-----------CCCEEEEcCCCHHHHHHHHHHcCC--
Confidence            355566777777543       588999999887655544322           567788888887777778889999  


Q ss_pred             CCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh--CCEEEeecccccccc
Q 037144          200 KNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF--GIWVHVDAAYAGSAC  277 (502)
Q Consensus       200 ~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~--g~~lhVDaA~g~~~~  277 (502)
                       +++.+|++.  ++.+|++.|++++.+.+      .+|+++.++|++|.+-|++++.++|+.+  |+++++|++|+....
T Consensus       118 -~~~~~~~~~--~~~~d~~~l~~~~~~~~------~~v~l~~p~NptG~~~~~~~~~~l~~~~~~~~~ii~D~~y~~~~~  188 (346)
T TIGR01141       118 -EVVKVPLDE--DGQLDLEDILVAIDDKP------KLVFLCSPNNPTGNLLSRSDIEAVLERTPEDALVVVDEAYGEFSG  188 (346)
T ss_pred             -eEEEeccCC--CCCCCHHHHHHhcCCCC------CEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhhcC
Confidence             999999975  46899999999764433      3788889999999999999999999987  999999999974332


Q ss_pred             cCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCC
Q 037144          278 ICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCR  356 (502)
Q Consensus       278 ~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr  356 (502)
                      . .......... ..+.+..+++|+++.| ..+|+++.+ +..+. .+......                   ++     
T Consensus       189 ~-~~~~~~~~~~-~~~i~~~S~sK~~g~~G~r~G~~~~~-~~~~~-~~~~~~~~-------------------~~-----  240 (346)
T TIGR01141       189 E-PSTLPLLAEY-PNLIVLRTLSKAFGLAGLRIGYAIAN-AEIID-ALNKVRAP-------------------FN-----  240 (346)
T ss_pred             C-ccHHHHHhhC-CCEEEEehhhHhhhchhhhceeeecC-HHHHH-HHHhccCC-------------------CC-----
Confidence            1 1111112211 2235567889999644 457888764 33322 22111000                   00     


Q ss_pred             CCCchHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccc
Q 037144          357 RFRSLKLWVVIRNFGV-ANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQY  435 (502)
Q Consensus       357 ~~~al~~~~~l~~~g~-~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~  435 (502)
                       ...+....+...+.. ..+.+..++..++++++.+.|++++++++. ++...++++.+.. .                 
T Consensus       241 -~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~g~~~~~~~~~-~-----------------  300 (346)
T TIGR01141       241 -LSRLAQAAAIAALRDDDFIEKTVEEINAERERLYDGLKKLPGLEVY-PSDANFVLIRFPR-D-----------------  300 (346)
T ss_pred             -CCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEC-CCcCCEEEEecCC-C-----------------
Confidence             012222333333322 247778888899999999999988888864 4455566665532 1                 


Q ss_pred             cccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECC-EEEEEEEecCCCCcHHHHHHHHHHHH
Q 037144          436 RQFSEEERTNEFNRELLESINVSGKVFMTHAIVGG-IYVLRFAAGNSMTMESHVRAAWTVVQ  496 (502)
Q Consensus       436 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g-~~~lR~~~~~~~t~~~di~~~~~~l~  496 (502)
                                  .+++.++|.+.|..+.+...+.+ ..++|++++    +++++++++++|+
T Consensus       301 ------------~~~~~~~L~~~gI~v~~g~~f~~~~~~iRls~~----~~~~i~~~~~~l~  346 (346)
T TIGR01141       301 ------------ADALFEALLEKGIIVRDLNSYPGLPNCLRITVG----TREENDRFLAALR  346 (346)
T ss_pred             ------------HHHHHHHHHHCCeEEEeCCCcCCCCCeEEEecC----CHHHHHHHHHHhC
Confidence                        24667777777865444332322 578999975    5679999998773

Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.

>PLN02955 8-amino-7-oxononanoate synthase

Probab=99.85  E-value=6.3e-19  Score=179.36  Aligned_cols=305  Identities=12%  Similarity=0.069  Sum_probs=197.6

Q ss_pred             hHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHH--HHHHhCcc-CCCCeEEEeCCCCchhHHH
Q 037144          114 AVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDR--VLKKIGRE-NISKLVVYSSDQTHCAFQK  190 (502)
Q Consensus       114 ~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~--~~~~~~~~-~~~~~~v~~s~~~H~s~~~  190 (502)
                      .+.+..++.+.|++++|.+.         .++.++|..||+.++.+....  .+...+.. ..+++.|++....|.|+..
T Consensus       145 ~~~~h~~LE~~LA~f~g~e~---------all~sSGy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~d  215 (476)
T PLN02955        145 YTTYHRLLESSLADLKKKED---------CLVCPTGFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIID  215 (476)
T ss_pred             ChHHHHHHHHHHHHHHCCCc---------EEEECChHHHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHH
Confidence            34555666777899999875         588888999997776654210  00000000 0146788899999999999


Q ss_pred             HHHHcCC-CCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEee
Q 037144          191 AAQIVGI-DRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVD  269 (502)
Q Consensus       191 aa~~~Gl-g~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVD  269 (502)
                      ++++... |..+++.++.       .|+++|+++|+....   ...+|+.....++.|.+-|+++|.++|++||++++||
T Consensus       216 G~~ls~~~~~a~~~~f~H-------ND~~~Le~~L~~~~~---~~~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVD  285 (476)
T PLN02955        216 GVRLAERQGNVEVFVYRH-------CDMYHLNSLLSSCKM---KRKVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVID  285 (476)
T ss_pred             HHHhccccCCceEEEeCC-------CCHHHHHHHHHhCCC---CceEEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEc
Confidence            9998732 1116777764       389999999976432   2346777778999999999999999999999999999


Q ss_pred             cccccccccCccchhhhc--C-CCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhh-cCCcccccCccCCCCCccccc
Q 037144          270 AAYAGSACICPEFRHFID--G-VECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTL-STNPQYLKNEATDQEPKEQEV  345 (502)
Q Consensus       270 aA~g~~~~~~~~~~~~~~--~-~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~-~~~~~yl~~~~~~~~~~~~~~  345 (502)
                      .||+.+.+- +..+....  + ....|.++.++.|.++..  .|+++.+ +... +.+ .....|++.....        
T Consensus       286 EAH~~Gv~G-~~G~G~~e~~g~~~di~ii~~TLsKA~G~~--GGfi~gs-~~~~-~~l~~~~~~~ifStalp--------  352 (476)
T PLN02955        286 DAHGTFVCG-ENGGGVAEEFNCEADVDLCVGTLSKAAGCH--GGFIACS-KKWK-QLIQSRGRSFIFSTAIP--------  352 (476)
T ss_pred             ccccCceec-CCCCcHHHHhCCCCCCcEEEEeCccchhcc--CceeecH-HHHH-HHHHHhCCCCeeccccc--------
Confidence            999876653 22222211  1 247889999999998654  3444443 3332 232 2344455432110        


Q ss_pred             CCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhh
Q 037144          346 GYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRT  425 (502)
Q Consensus       346 ~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~  425 (502)
                                 +..+.+..++++.+-.+  ..+.+++.++.++|++.+    |+.+    .++++.+.+..         
T Consensus       353 -----------p~~aaa~laal~l~~~~--~~~r~~L~~n~~~fr~~~----G~~~----~sPI~pI~ig~---------  402 (476)
T PLN02955        353 -----------VPMAAAAYAAVVVARKE--KWRRKAIWERVKEFKALS----GVDI----SSPIISLVVGN---------  402 (476)
T ss_pred             -----------HHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHhc----CCCC----CCCEEEEEeCC---------
Confidence                       01122233344443221  246677888888888742    5543    36677766643         


Q ss_pred             cccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEE---EEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144          426 KYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVF---MTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       426 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~---~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~  500 (502)
                                         +.....+.++|.++|..+   ..|++..+...+|++++..||.+ ||++++++|.++.+
T Consensus       403 -------------------~~~a~~~~~~L~~~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~e-dId~lv~~L~~~~~  460 (476)
T PLN02955        403 -------------------QEKALKASRYLLKSGFHVMAIRPPTVPPNSCRLRVTLSAAHTTE-DVKKLITALSSCLD  460 (476)
T ss_pred             -------------------HHHHHHHHHHHHHCCCEEEEECCCCCCCCCceEEEeeCCCCCHH-HHHHHHHHHHHHHh
Confidence                               233557788888889742   23444467778999998766655 99999999988754

>PRK09064 5-aminolevulinate synthase; Validated

Probab=99.85  E-value=8e-19  Score=180.78  Aligned_cols=298  Identities=12%  Similarity=0.076  Sum_probs=190.9

Q ss_pred             HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144          116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV  195 (502)
Q Consensus       116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~  195 (502)
                      ....++.+.+++++|.+         ..++.++|++||..++..++..         .++.+|+.+...|.++...++..
T Consensus        91 ~~~~~l~~~la~~~g~~---------~~~~~~sG~~an~~ai~~l~~~---------~~~~~i~~~~~~h~s~~~~~~~~  152 (407)
T PRK09064         91 HYHVELERELADLHGKE---------AALVFTSGYVSNDATLSTLAKL---------IPDCVIFSDELNHASMIEGIRRS  152 (407)
T ss_pred             HHHHHHHHHHHHHhCCC---------cEEEECcHHHHHHHHHHHHhCC---------CCCCEEEEeCcchHHHHHHHHHc
Confidence            33445556677888853         2567777889998887766431         14567777777899998888888


Q ss_pred             CCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccc
Q 037144          196 GIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGS  275 (502)
Q Consensus       196 Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~  275 (502)
                      |.   .++.++.       .|+++|++.++...  ...+.+|+++.+.+++|.+.|+++|.++|++||++++||+||+.+
T Consensus       153 ~~---~~~~~~~-------~d~~~le~~l~~~~--~~~~~~v~~~~v~s~~G~~~~l~~i~~l~~~~~~~livDEa~~~G  220 (407)
T PRK09064        153 RC---EKHIFRH-------NDVAHLEELLAAAD--PDRPKLIAFESVYSMDGDIAPIAEICDLADKYNALTYLDEVHAVG  220 (407)
T ss_pred             CC---cEEEECC-------CCHHHHHHHHHhcc--CCCCeEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEECCCccc
Confidence            87   7766653       37889999886421  123558888899999999999999999999999999999999744


Q ss_pred             cccCccchhh--hcC-CCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccc
Q 037144          276 ACICPEFRHF--IDG-VECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQI  352 (502)
Q Consensus       276 ~~~~~~~~~~--~~~-~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~  352 (502)
                      .+ .+.....  ..+ .+..|.++.+++|.++.+.  |+++. ++...........+|...                   
T Consensus       221 ~~-g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G--G~~~~-~~~~~~~l~~~~~~~~~t-------------------  277 (407)
T PRK09064        221 MY-GPRGGGIAERDGLMDRIDIIEGTLAKAFGVMG--GYIAG-SAALVDAVRSYAPGFIFT-------------------  277 (407)
T ss_pred             cc-CCCCCChHHhcCCCCCCeEEEEecchhhhccC--ceEec-CHHHHHHHHHhCcccccc-------------------
Confidence            32 1211111  112 2356888889999987542  55544 333322111111222211                   


Q ss_pred             cCCC-CCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCC
Q 037144          353 TLCR-RFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGT  431 (502)
Q Consensus       353 ~~sr-~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~  431 (502)
                       .+. +..+..+..+++.+...  ....++..++++++.+.|++. |++++ ++..+++.+.+..               
T Consensus       278 -~~~~~~~~~aa~~al~~~~~~--~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~iv~i~~~~---------------  337 (407)
T PRK09064        278 -TSLPPAIAAAALASIRHLKES--NEERERHQERAAKLKAALDAA-GIPVM-PNESHIVPVMVGD---------------  337 (407)
T ss_pred             -CcCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHc-CCCCC-CCCCCEEEEEeCC---------------
Confidence             111 11223344555544222  334677889999999999986 78766 3456676665532               


Q ss_pred             cccccccchhHhhHHHHHHHHHHHHhc-CcEEEEeee----ECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          432 YDQYRQFSEEERTNEFNRELLESINVS-GKVFMTHAI----VGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       432 ~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~----~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                                   .....++.++|.++ |.+ +.+..    ..+..++|++++. ..+++|++++++.|+++.++
T Consensus       338 -------------~~~~~~l~~~L~~~~gi~-v~~~~~p~~~~~~~~lRis~~~-~~t~edi~~l~~~l~~~~~~  397 (407)
T PRK09064        338 -------------PEKCKKASDMLLEEHGIY-VQPINYPTVPRGTERLRITPTP-FHTDEMIDHLVEALVEVWAR  397 (407)
T ss_pred             -------------HHHHHHHHHHHHHhCCEE-EeeECCCCCCCCCceEEEEeCC-CCCHHHHHHHHHHHHHHHHH
Confidence                         11235667777654 654 43321    1244689999864 45667999999999988764

>PLN02376 1-aminocyclopropane-1-carboxylate synthase

Probab=99.85  E-value=5.7e-19  Score=184.75  Aligned_cols=322  Identities=13%  Similarity=0.099  Sum_probs=208.7

Q ss_pred             cccChhhHHHHHHHHHHHHHhcC----CCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCC
Q 037144          108 WISSPAAVELENIVMDWLGQMLD----LPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQ  183 (502)
Q Consensus       108 ~~~~p~~~~le~~~~~~l~~l~g----~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~  183 (502)
                      |....+..++.+++++|+.+.+|    ++.+       ..++|+|+++++...+.+..+           +++.|+++.+
T Consensus        90 y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe-------~Ivit~Ga~~al~~l~~~l~~-----------pGD~Vlv~~P  151 (496)
T PLN02376         90 FQDYHGLKKFRQAIAHFMGKARGGKVTFDPE-------RVVMSGGATGANETIMFCLAD-----------PGDVFLIPSP  151 (496)
T ss_pred             cCCCCCcHHHHHHHHHHHHHHhCCCCcCChh-------hEEEccchHHHHHHHHHHhCC-----------CCCEEEECCC
Confidence            44455668899999999999888    3433       689999999998777665543           7788999999


Q ss_pred             CchhHHHHHH-HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hhHHHHHH
Q 037144          184 THCAFQKAAQ-IVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LKPLCDVA  259 (502)
Q Consensus       184 ~H~s~~~aa~-~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~eI~~i~  259 (502)
                      .|..+...+. ..|+   +++.||++.++++.+|+++++++++...+.+.++.+|+++.++|+||.+-+   +++|+++|
T Consensus       152 ~Y~~~~~~~~~~~G~---~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a  228 (496)
T PLN02376        152 YYAAFDRDLRWRTGV---EIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFV  228 (496)
T ss_pred             CccchHHHHHhhCCC---EEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHH
Confidence            9999988777 4899   999999975456899999999988655444445667888899999999965   66788899


Q ss_pred             HHhCCEEEeecccccccccCccchh---hhcC--CC--CCC--eeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcc
Q 037144          260 KQFGIWVHVDAAYAGSACICPEFRH---FIDG--VE--CVD--SFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQ  329 (502)
Q Consensus       260 ~~~g~~lhVDaA~g~~~~~~~~~~~---~~~~--~~--~aD--si~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~  329 (502)
                      ++||+++++|.+|+...+..+.+..   ....  ..  ..+  .++.+++|.++ ....+|+++..++... ........
T Consensus       229 ~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~~l~-~~~~~~~~  307 (496)
T PLN02376        229 TRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSVV-SCARKMSS  307 (496)
T ss_pred             HHcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECCHHHH-HHHHHHhh
Confidence            9999999999999876543322211   1111  00  112  23568999996 5577898887655432 22211111


Q ss_pred             cccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHH-----HHHHHHHHHHHHHHHHHHHHhcCCCeEEecC
Q 037144          330 YLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVA-----NLRNFIRSHVGMAKLFERLVTSDKRFEVAFP  404 (502)
Q Consensus       330 yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~-----g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~  404 (502)
                      +..                         ...+..+++...+...     -+.+..+++.+..+.+.+.|++. +++++ +
T Consensus       308 ~~~-------------------------vs~~~Q~a~~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~-gi~~~-~  360 (496)
T PLN02376        308 FGL-------------------------VSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKA-DIACL-T  360 (496)
T ss_pred             cCC-------------------------CCHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCccc-C
Confidence            100                         0223333333333222     23334566677778888888876 77765 4


Q ss_pred             CCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcEEEEeeeEC--CEEEEEEEecCC
Q 037144          405 RNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKVFMTHAIVG--GIYVLRFAAGNS  481 (502)
Q Consensus       405 ~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~--g~~~lR~~~~~~  481 (502)
                      +..++++|.-.+....                   + ....+...++.+.+.++ |..+.++..+.  +.+++|+++++ 
T Consensus       361 ~~aG~flwi~l~~~~~-------------------~-~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~fa~-  419 (496)
T PLN02376        361 SNAGLFAWMDLRHLLR-------------------D-RNSFESEIELWHIIIDKVKLNVSPGSSFRCTEPGWFRICFAN-  419 (496)
T ss_pred             CCceEEEEEEchhhhc-------------------c-CCchhHHHHHHHHHHHcCCEEEeCccccCCCCCCEEEEEeeC-
Confidence            5555555543332110                   0 00001123566666665 65444444442  35799999975 


Q ss_pred             CCcHHHHHHHHHHHHHHHH
Q 037144          482 MTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       482 ~t~~~di~~~~~~l~~~~~  500 (502)
                       .+++.++.+++.|.++..
T Consensus       420 -~~~~~l~~al~rl~~~l~  437 (496)
T PLN02376        420 -MDDDTLHVALGRIQDFVS  437 (496)
T ss_pred             -CCHHHHHHHHHHHHHHHH
Confidence             345789999999888764

>PRK06348 aspartate aminotransferase; Provisional

Probab=99.85  E-value=1e-18  Score=178.44  Aligned_cols=326  Identities=12%  Similarity=0.104  Sum_probs=210.1

Q ss_pred             HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144           90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG  169 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~  169 (502)
                      +.++.+++.... .....|....+..++++.+++|+.+.+|++-..     ...++|+|+++++..++.+...       
T Consensus        45 ~~~~~~~~~~~~-~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~-----~~i~it~G~~~al~~~~~~~~~-------  111 (384)
T PRK06348         45 ESIINAAFEDAK-KGHTRYTDSGGDVELIEEIIKYYSKNYDLSFKR-----NEIMATVGACHGMYLALQSILD-------  111 (384)
T ss_pred             HHHHHHHHHHHh-cCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCh-----hhEEEcCChHHHHHHHHHHhcC-------
Confidence            444444444332 223456655666789999999998887764321     2689999999988777665543       


Q ss_pred             ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144          170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV  249 (502)
Q Consensus       170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i  249 (502)
                          +++.|+++.+.|..+..+++.+|.   .++.+|+++++++.+|+++|++++++.+      .+|+++.++|+||.+
T Consensus       112 ----~gd~vlv~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~~~------~~v~l~~p~NPtG~~  178 (384)
T PRK06348        112 ----PGDEVIIHEPYFTPYKDQIEMVGG---KPIILETYEEDGFQINVKKLEALITSKT------KAIILNSPNNPTGAV  178 (384)
T ss_pred             ----CCCEEEEeCCCCcchHHHHHHcCC---EEEEecCCcCcCCcCCHHHHHHhhCcCc------cEEEEeCCCCCCCcC
Confidence                677888999999999999999999   8999987544457899999999886433      266677899999998


Q ss_pred             C---ChhHHHHHHHHhCCEEEeecccccccccCccchhh--hcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhh
Q 037144          250 D---PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF--IDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLST  323 (502)
Q Consensus       250 d---pl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~  323 (502)
                      -   .+++|.++|++||+++++|.+|+...... .....  +.+...-..+..++.|.++ ....+|+++.. +.. ...
T Consensus       179 ~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~~-~~~-~~~  255 (384)
T PRK06348        179 FSKETLEEIAKIAIEYDLFIISDEVYDGFSFYE-DFVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVIAP-DYI-IET  255 (384)
T ss_pred             CCHHHHHHHHHHHHHCCeEEEEecccccceeCC-CccchhhcCCCcCcEEEEecchhccCCccccceeeecC-HHH-HHH
Confidence            5   47888899999999999999998765432 11111  1111122355567999997 55667887764 322 222


Q ss_pred             hcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 037144          324 LSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSDKRFEV  401 (502)
Q Consensus       324 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l  401 (502)
                      +.....+...                    +   ...+...++...+  ..+.++++.+.+.++++++.+.|++++++++
T Consensus       256 ~~~~~~~~~~--------------------~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~  312 (384)
T PRK06348        256 AKIINEGICF--------------------S---APTISQRAAIYALKHRDTIVPLIKEEFQKRLEYAYKRIESIPNLSL  312 (384)
T ss_pred             HHHHHHhccC--------------------C---CCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCcee
Confidence            2111110000                    0   0122222222222  2344566777778888899999988877776


Q ss_pred             ecCCCeeEEEEEeec-CcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh-cCcEEEEeeeEC--CEEEEEEE
Q 037144          402 AFPRNFSLVCFRVTP-SAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV-SGKVFMTHAIVG--GIYVLRFA  477 (502)
Q Consensus       402 ~~~~~~~~v~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--g~~~lR~~  477 (502)
                      . +|+.++++|.-.+ ...                         +  ..++.+.+.+ .|..+.++..+.  +..++|++
T Consensus       313 ~-~p~gg~~~~~~~~~~~~-------------------------~--~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~  364 (384)
T PRK06348        313 H-PPKGSIYAFINIKKTGL-------------------------S--SVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLA  364 (384)
T ss_pred             c-cCCeeEEEEEecccCCC-------------------------C--HHHHHHHHHHhCCEEEcCchhhccCCCCeEEEE
Confidence            5 5666666543322 111                         0  2345666553 476555444443  35799999


Q ss_pred             ecCCCCcHHHHHHHHHHHHHH
Q 037144          478 AGNSMTMESHVRAAWTVVQEH  498 (502)
Q Consensus       478 ~~~~~t~~~di~~~~~~l~~~  498 (502)
                      ++   .++++++.+++.|+++
T Consensus       365 ~~---~~~~~l~~al~~l~~~  382 (384)
T PRK06348        365 CT---VGIEVLEEAFNRIEKM  382 (384)
T ss_pred             ec---CCHHHHHHHHHHHHhh
Confidence            85   3567899999888764

>PRK05942 aspartate aminotransferase; Provisional

Probab=99.85  E-value=2.4e-18  Score=176.37  Aligned_cols=313  Identities=12%  Similarity=0.087  Sum_probs=198.3

Q ss_pred             cccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCc
Q 037144          106 LDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTH  185 (502)
Q Consensus       106 ~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H  185 (502)
                      ..|....+..++++++++|+.+.+|.+-+.    ....++|+|+++++..++.+..+           +++.|+++.++|
T Consensus        67 ~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~----~~~i~vt~G~~~al~~~~~~~~~-----------~gd~Vlv~~P~y  131 (394)
T PRK05942         67 HGYPPFEGTASFRQAITDWYHRRYGVELDP----DSEALPLLGSKEGLTHLALAYVN-----------PGDVVLVPSPAY  131 (394)
T ss_pred             ccCCCCCCCHHHHHHHHHHHHHHHCCCcCC----CCeEEEccChHHHHHHHHHHhCC-----------CCCEEEEcCCCC
Confidence            456555567889999999999988864221    01367889999988776655432           678899999999


Q ss_pred             hhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hhHHHHHHHHh
Q 037144          186 CAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LKPLCDVAKQF  262 (502)
Q Consensus       186 ~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~eI~~i~~~~  262 (502)
                      ..+...+...|+   +++.+|++.++++.+|+++|++++.+.+      .+|+++.++|+||.+-+   +++|.++|++|
T Consensus       132 ~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~~~~~~------k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~  202 (394)
T PRK05942        132 PAHFRGPLIAGA---QIYPIILKPENDWLIDLSSIPEEVAQQA------KILYFNYPSNPTTATAPREFFEEIVAFARKY  202 (394)
T ss_pred             cchHHHHHHcCC---EEEEeecCCccCCccCHHHHHHhccccc------eEEEEcCCCCCCCCcCCHHHHHHHHHHHHHc
Confidence            988888888999   9999999765557899999999886533      37788889999999976   88999999999


Q ss_pred             CCEEEeecccccccccCccchhh--hcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcccccCccCCCC
Q 037144          263 GIWVHVDAAYAGSACICPEFRHF--IDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQE  339 (502)
Q Consensus       263 g~~lhVDaA~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~  339 (502)
                      |+++++|.+|+.+..........  +.+.........++.|.++ .+..+|+++. ++.... .+.....+...      
T Consensus       203 ~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~-~~~l~~-~l~~~~~~~~~------  274 (394)
T PRK05942        203 EIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVG-NRHIIQ-GLRTLKTNLDY------  274 (394)
T ss_pred             CeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhhheeeeec-CHHHHH-HHHHHHhhccc------
Confidence            99999999997654321111111  1111122344567889885 4556888875 333322 22111111100      


Q ss_pred             CcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEE-EEeecCc
Q 037144          340 PKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVC-FRVTPSA  418 (502)
Q Consensus       340 ~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~-f~~~~~~  418 (502)
                                 +.  + ......+-.+++ ...+.+++..+++.++.+++.+.|++. ++++. ++..+++. +.+++ .
T Consensus       275 -----------~~--~-~~~q~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~-~~~~~~f~~~~~~~-~  336 (394)
T PRK05942        275 -----------GI--F-SALQKAAETALQ-LPDSYLQQVQERYRTRRDFLIQGLGEL-GWNIP-PTKATMYLWVPCPV-G  336 (394)
T ss_pred             -----------CC--C-HHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHHHC-CCeec-CCCeeeEEEEECCC-C
Confidence                       00  0 001111222222 234566777788888899999999887 67765 55666544 44432 1


Q ss_pred             chhhhhhcccCCCcccccccchhHhhHHHHHHHHHHH-HhcCcEEEEeeeEC--CEEEEEEEecCCCCcHHHHHHHHHHH
Q 037144          419 VMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESI-NVSGKVFMTHAIVG--GIYVLRFAAGNSMTMESHVRAAWTVV  495 (502)
Q Consensus       419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~g~~~~~~~~~~--g~~~lR~~~~~~~t~~~di~~~~~~l  495 (502)
                      .                         +  ..++..++ .+.|..+..+..+.  +..++|+++.   .+.+.+...++.|
T Consensus       337 ~-------------------------~--~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~---~~~~~l~~~l~~l  386 (394)
T PRK05942        337 M-------------------------G--STDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLI---ADCDRLGEALDRL  386 (394)
T ss_pred             C-------------------------C--HHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEec---CCHHHHHHHHHHH
Confidence            1                         0  12334433 34576554444442  3579999986   2344566666665


Q ss_pred             HHH
Q 037144          496 QEH  498 (502)
Q Consensus       496 ~~~  498 (502)
                      .+.
T Consensus       387 ~~~  389 (394)
T PRK05942        387 KQA  389 (394)
T ss_pred             HHh
Confidence            543

>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase

Probab=99.84  E-value=1.7e-18  Score=176.97  Aligned_cols=326  Identities=13%  Similarity=0.089  Sum_probs=206.8

Q ss_pred             HHHHHHHHHhhcC-CCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHh
Q 037144           90 AGIVGEMLSSGFN-VVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKI  168 (502)
Q Consensus        90 ~~~~~~~l~~~~n-~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~  168 (502)
                      +..+.+.+...+. .....|....+..++.+.+++|+.+.+|.+...    ....++|+|+++++...+.+..+      
T Consensus        44 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~----~~~vi~t~G~~~~l~~~~~~~~~------  113 (383)
T TIGR03540        44 PKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDP----ETEVLSLIGSKEGIAHIPLAFVN------  113 (383)
T ss_pred             CHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCC----CCeEEECCCcHHHHHHHHHHhCC------
Confidence            4445555554432 223456555566889999999999888874221    01467888988888766554432      


Q ss_pred             CccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144          169 GRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA  248 (502)
Q Consensus       169 ~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~  248 (502)
                           +++.|+++..++..+..+++.+|.   +++.+|++.++++.+|+++|++++.++      +.+|+++.++|+||.
T Consensus       114 -----~gd~vlv~~P~y~~~~~~~~~~G~---~v~~v~~~~~~g~~~d~~~l~~~~~~~------~~~v~i~~P~NPtG~  179 (383)
T TIGR03540       114 -----PGDIVLVPDPGYPVYRIGTLFAGG---EPYEMPLKEENGFLPDFDAIPEDIAKK------AKLMFINYPNNPTGA  179 (383)
T ss_pred             -----CCCEEEEeCCCCcchHHHHHhcCC---EEEEEecCcccCCccCHHHHHhhcccc------ceEEEEeCCCCCcCc
Confidence                 678899999999888889999999   999999975445778999999988643      337778889999999


Q ss_pred             cCC---hhHHHHHHHHhCCEEEeecccccccccCccchhh--hcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhh
Q 037144          249 VDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF--IDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLS  322 (502)
Q Consensus       249 idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~  322 (502)
                      +-+   +++|+++|++||+++++|.+|+............  +.+...-..+..++.|.++.| ..+|+++. ++.... 
T Consensus       180 ~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~-~~~l~~-  257 (383)
T TIGR03540       180 VAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVG-NADLIA-  257 (383)
T ss_pred             cCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCccceeeEEeC-CHHHHH-
Confidence            976   7899999999999999999997554321111111  111112235567789999644 45777754 443332 


Q ss_pred             hhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 037144          323 TLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSDKRFE  400 (502)
Q Consensus       323 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~~~~  400 (502)
                      .+.....+...                       ....+...++...+  +.+.+++..+.+.++++.+.+.|++. ++.
T Consensus       258 ~~~~~~~~~~~-----------------------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~  313 (383)
T TIGR03540       258 GLGKVKTNVDS-----------------------GVFQAIQYAAIAALNGPQDVVKEIRKIYQRRRDLLLEALKKI-GID  313 (383)
T ss_pred             HHHHHHHhccc-----------------------CCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCE
Confidence            22111001000                       00111122222222  45667777888889999999999987 788


Q ss_pred             EecCCCeeEE-EEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeEC--CEEEEEE
Q 037144          401 VAFPRNFSLV-CFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVG--GIYVLRF  476 (502)
Q Consensus       401 l~~~~~~~~v-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lR~  476 (502)
                      +. ++..+.+ ++.++ ...                           ...++.+++. +.|..+.++..+.  +..++|+
T Consensus       314 ~~-~~~~~~~~~~~l~-~~~---------------------------~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ri  364 (383)
T TIGR03540       314 VE-KPKATFYVWVPVP-EGY---------------------------TSAEFAARLLEETGVVVTPGVGFGEYGEGYIRI  364 (383)
T ss_pred             ec-CCCcceEEEEECC-CCC---------------------------CHHHHHHHHHHHCCEEEecchhhCccCCCeEEE
Confidence            76 4444554 44443 221                           0235666654 4566554443332  3468999


Q ss_pred             EecCCCCcHHHHHHHHHHHHH
Q 037144          477 AAGNSMTMESHVRAAWTVVQE  497 (502)
Q Consensus       477 ~~~~~~t~~~di~~~~~~l~~  497 (502)
                      +++.   ++++++++++.|.+
T Consensus       365 s~~~---~~~~l~~~l~~l~~  382 (383)
T TIGR03540       365 SLTV---PDERLEEAVARIKK  382 (383)
T ss_pred             EecC---CHHHHHHHHHHHhh
Confidence            9962   46688888877654

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.

>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue

Probab=99.84  E-value=2.9e-19  Score=181.25  Aligned_cols=317  Identities=15%  Similarity=0.123  Sum_probs=210.0

Q ss_pred             CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCC
Q 037144          105 GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQT  184 (502)
Q Consensus       105 ~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~  184 (502)
                      ...|....+..++++.+.+|+.+-.|.+.+.     ...+++++|+.+++..+......         .+++.|++..+.
T Consensus        37 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~-----~~~i~~~~G~~~~~~~~~~~~~~---------~~~~~vlv~~P~  102 (363)
T PF00155_consen   37 FLGYPPPQGYPELREAIADFLGRRYGVPVDP-----EANILVTSGAQAALFLLLRLLKI---------NPGDTVLVPDPC  102 (363)
T ss_dssp             CTSSTCTTHHHHHHHHHHHHHHHHHTHHTTG-----GEGEEEESHHHHHHHHHHHHHHS---------STTSEEEEEESS
T ss_pred             cccCCCchhhHHHHHHHHHHhhhccCccccc-----ceEEEEecccccchhhhhhcccc---------cccccceecCCc
Confidence            4467777778999999999998766664432     11355555555555554444320         156788899999


Q ss_pred             chhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChh---HHHHHHHH
Q 037144          185 HCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLK---PLCDVAKQ  261 (502)
Q Consensus       185 H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~---eI~~i~~~  261 (502)
                      |..+...++..|+   .++.+|++..+++.+|+++|++.+++...++..+.+|+++.++++||..-+.+   +|+++|++
T Consensus       103 y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~  179 (363)
T PF00155_consen  103 YPSYIEAARLLGA---EVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELARE  179 (363)
T ss_dssp             STHHHHHHHHTTS---EEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHH
T ss_pred             cccccccccccCc---eeeeccccccccccccccccccccccccccccccceeeecccccccccccccccccchhhhhcc
Confidence            9999999999999   99999986555789999999999988655443456788899999999985554   55555999


Q ss_pred             hCCEEEeecccccccccCccchhhhcCCC-CCC-eeEEccCCcCCCC-CcceEEEeeCchhhhhhhcC-CcccccCccCC
Q 037144          262 FGIWVHVDAAYAGSACICPEFRHFIDGVE-CVD-SFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLST-NPQYLKNEATD  337 (502)
Q Consensus       262 ~g~~lhVDaA~g~~~~~~~~~~~~~~~~~-~aD-si~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~  337 (502)
                      ||+++++|.+|+.+....+........+. ..+ .++.+++|.++.| ...|++++ ++.... .+.. ...+...    
T Consensus       180 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~-~~~~~~-~l~~~~~~~~~~----  253 (363)
T PF00155_consen  180 YNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVA-PPELIE-RLRRFQRSGLSS----  253 (363)
T ss_dssp             TTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEE-EHHHHH-HHHHHHHHTTSS----
T ss_pred             cccceeeeeceeccccCCCccCcccccccccccceeeeeccccccccccccccccc-hhhhhh-hhhhcccccccc----
Confidence            99999999999887665332211111111 223 6777899998766 46788877 443322 2211 1111100    


Q ss_pred             CCCcccccCCCcccccCCCCCCchHHHHHHHHhc--HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEee
Q 037144          338 QEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG--VANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVT  415 (502)
Q Consensus       338 ~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g--~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~  415 (502)
                                         ......+...+...+  .+.++++.+++.++++++.+.|++. ++.+..++ .++++|...
T Consensus       254 -------------------~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~-~~~~~~~~~  312 (363)
T PF00155_consen  254 -------------------SPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEI-GITVLPPE-AGFFLWVRL  312 (363)
T ss_dssp             -------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TSEEEHHS-BSSEEEEEE
T ss_pred             -------------------chhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHh-hhheeecc-CccEEEEEc
Confidence                               001112222232222  2267889999999999999999988 89988544 677776554


Q ss_pred             cCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHH
Q 037144          416 PSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTV  494 (502)
Q Consensus       416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~  494 (502)
                      +.                           . ...++.++|.++ |..+.++..+....++|++++ . .+++++++++++
T Consensus       313 ~~---------------------------~-~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~a-~-~~~e~~~~~~~~  362 (363)
T PF00155_consen  313 DP---------------------------N-DAEELAQELLEEYGILVRPGSYFGVPGYIRISLA-S-HSEEDLEEALER  362 (363)
T ss_dssp             SH---------------------------H-HHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEGG-C-SCHHHHHHHHHH
T ss_pred             cc---------------------------c-hHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEec-c-CCHHHHHHHHhh
Confidence            32                           1 245677778887 876555444444679999983 2 466799999987


Q ss_pred             H
Q 037144          495 V  495 (502)
Q Consensus       495 l  495 (502)
                      |
T Consensus       363 l  363 (363)
T PF00155_consen  363 L  363 (363)
T ss_dssp             H
T ss_pred             C
Confidence            5

On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....

>PRK07568 aspartate aminotransferase; Provisional

Probab=99.84  E-value=3e-18  Score=176.03  Aligned_cols=330  Identities=14%  Similarity=0.097  Sum_probs=204.1

Q ss_pred             HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144           90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG  169 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~  169 (502)
                      |..+.+.+....+ ....|....+..++.+.+.+++.. .|.+...     ...++|+|+++++..++.....       
T Consensus        45 ~~~~~~a~~~~~~-~~~~Y~~~~g~~~lr~~ia~~~~~-~~~~~~~-----~~i~~t~G~~~al~~~~~~l~~-------  110 (397)
T PRK07568         45 PEVFFEAIKNYDE-EVLAYSHSQGIPELREAFAKYYKK-WGIDVEP-----DEILITNGGSEAILFAMMAICD-------  110 (397)
T ss_pred             CHHHHHHHHHHhc-CCcCcCCCCCCHHHHHHHHHHHHH-hCCCCCc-----ceEEEcCChHHHHHHHHHHhcC-------
Confidence            4455555554433 233455555677888888888763 4442211     2688999999998776654422       


Q ss_pred             ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcc-cCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144          170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYG-LSAESVLSQINLDVEAELIPLFLCATVGTTAITA  248 (502)
Q Consensus       170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~-~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~  248 (502)
                          +++.|+++.+.|..+...++..|+   +++.++++.++++. .++++|++++++.+      .+|+++.++|+||.
T Consensus       111 ----~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~g~~~~~~~~l~~~~~~~~------~~v~i~~p~NPtG~  177 (397)
T PRK07568        111 ----PGDEILVPEPFYANYNGFATSAGV---KIVPVTTKIEEGFHLPSKEEIEKLITPKT------KAILISNPGNPTGV  177 (397)
T ss_pred             ----CCCEEEEecCCCccHHHHHHHcCC---EEEEeecCcccCCCCCCHHHHHHhcCccc------eEEEEECCCCCCCc
Confidence                567788887777777777888999   99999986433334 36899998886543      37788889999999


Q ss_pred             cC---ChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCC-CC--eeEEccCCcCCC-CCcceEEEeeCchhhh
Q 037144          249 VD---PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEC-VD--SFSFNPHKWLFT-TLDCCCLWVKDPSCLL  321 (502)
Q Consensus       249 id---pl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~-aD--si~~~~hK~l~~-p~~~g~~~~r~~~~l~  321 (502)
                      +-   ++++|+++|+++|+++++|.+|+.+....+...... .+.. .+  .+..+++|.++. ...+|+++..++....
T Consensus       178 ~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~-~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~~~~~~  256 (397)
T PRK07568        178 VYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSAL-SLEGLEDRVIIIDSVSKRYSACGARIGCLISKNKELIA  256 (397)
T ss_pred             cCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChh-hcCCCcCCEEEEecchhhccCCCcceEEEecCCHHHHH
Confidence            86   478999999999999999999987643221111111 1111 22  455679999874 5668888775554432


Q ss_pred             hhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCe
Q 037144          322 STLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSDKRF  399 (502)
Q Consensus       322 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~~~  399 (502)
                      .........+                         ....+...++...+  +.+.+++..+.+.+.++.+.+.|++++++
T Consensus       257 ~~~~~~~~~~-------------------------~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~  311 (397)
T PRK07568        257 AAMKLCQARL-------------------------SPPTLEQIGAAALLDTPESYFDEVREEYKKRRDILYEELNKIPGV  311 (397)
T ss_pred             HHHHHhhccC-------------------------CCCcHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence            2211110000                         00122222222222  45667778888889999999999988777


Q ss_pred             EEecCCCeeEE-EEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH--hcCcEEEEeeeEC-----CE
Q 037144          400 EVAFPRNFSLV-CFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN--VSGKVFMTHAIVG-----GI  471 (502)
Q Consensus       400 ~l~~~~~~~~v-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--~~g~~~~~~~~~~-----g~  471 (502)
                      .+. +|..+++ +++++...                         ..++.+.+.++..  +.|..+.++..+.     +.
T Consensus       312 ~~~-~p~g~~~~~~~l~~~~-------------------------~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~  365 (397)
T PRK07568        312 VCE-KPKGAFYIIAKLPVDD-------------------------AEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGK  365 (397)
T ss_pred             eec-CCCcceEEEEecCCCC-------------------------HHHHHHHHHhhcccccceEEEeCchHhcCCCCCCC
Confidence            655 4555554 34443210                         0223333332211  1365544443331     24


Q ss_pred             EEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          472 YVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       472 ~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      .++|++++.   ++++++++++.|.++.++
T Consensus       366 ~~iRls~~~---~~~~~~~~~~~l~~~l~~  392 (397)
T PRK07568        366 NEIRIAYVL---NEEDLKRAMEILKEALEK  392 (397)
T ss_pred             CeEEEEEeC---CHHHHHHHHHHHHHHHHH
Confidence            699999862   457999999999887654

>PRK06107 aspartate aminotransferase; Provisional

Probab=99.84  E-value=1.2e-18  Score=178.92  Aligned_cols=342  Identities=9%  Similarity=0.020  Sum_probs=214.1

Q ss_pred             HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144           90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG  169 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~  169 (502)
                      +..+.+.+...+......|....+..++.+.+.+++++.+|.+...     ...++|+|+++|+..++.+...       
T Consensus        48 ~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~-----~~i~~t~G~~~al~~~~~~~~~-------  115 (402)
T PRK06107         48 PDHIKQAAVAAIERGETKYTLVNGTPALRKAIIAKLERRNGLHYAD-----NEITVGGGAKQAIFLALMATLE-------  115 (402)
T ss_pred             CHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCh-----hhEEEeCCHHHHHHHHHHHhcC-------
Confidence            3445666666554433456655567889999999999998874321     2689999999998777654322       


Q ss_pred             ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144          170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV  249 (502)
Q Consensus       170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i  249 (502)
                          +++.|++++..+..+..++...|.   .++.++++.++++.+|+++|++++.+.      +.+|+++.++|+||.+
T Consensus       116 ----~gd~vl~~~p~y~~y~~~~~~~~~---~~~~v~~~~~~~~~~~~~~l~~~~~~~------~~~v~l~~p~NPtG~~  182 (402)
T PRK06107        116 ----AGDEVIIPAPYWVSYPDMVLANDG---TPVIVACPEEQGFKLTPEALEAAITPR------TRWLILNAPSNPTGAV  182 (402)
T ss_pred             ----CCCEEEEecCCCcCHHHHHHHcCC---EEEEecCCcccCCCCCHHHHHhhcCcC------ceEEEEECCCCCCCcC
Confidence                677888888888777777777887   788888864445789999999988543      3367788899999988


Q ss_pred             CC---hhHHHHHHHHh-CCEEEeecccccccccCccchhhh---cCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhh
Q 037144          250 DP---LKPLCDVAKQF-GIWVHVDAAYAGSACICPEFRHFI---DGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLL  321 (502)
Q Consensus       250 dp---l~eI~~i~~~~-g~~lhVDaA~g~~~~~~~~~~~~~---~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~  321 (502)
                      -+   +++|+++|+++ |+++++|.+|+...+..+......   .+...--.+..+++|.++ ....+|+++.. +... 
T Consensus       183 ~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~~~-~~~~-  260 (402)
T PRK06107        183 YSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAGP-ADLI-  260 (402)
T ss_pred             cCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccceeeeecC-HHHH-
Confidence            54   67778889998 999999999975433221111111   111111234456799997 44557877653 3332 


Q ss_pred             hhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCe
Q 037144          322 STLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSDKRF  399 (502)
Q Consensus       322 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~~~  399 (502)
                      +.+.....+...                       ....+..+++.+.+  +...+++..+.+.++++.+.+.|++++++
T Consensus       261 ~~~~~~~~~~~~-----------------------~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~  317 (402)
T PRK06107        261 AAINKLQSQSSS-----------------------CPSSISQAAAAAALNGDQSFVTESVAVYKQRRDYALALLNAIPGL  317 (402)
T ss_pred             HHHHHHHHhccc-----------------------CCChHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence            222111111100                       01223334444443  44566777788888899999999888787


Q ss_pred             EEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeECCEEEEEEEe
Q 037144          400 EVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVGGIYVLRFAA  478 (502)
Q Consensus       400 ~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lR~~~  478 (502)
                      ++. +|+.+++.|...+.-...           .   .+....  ......+.+++. +.|.++.++..++...++|+++
T Consensus       318 ~~~-~p~gg~~~~~~~~~~~~~-----------~---~~~~~~--~~~~~~~~~~l~~~~gv~v~pg~~Fg~~~~iRis~  380 (402)
T PRK06107        318 SCL-VPDGAFYLYVNCAGLIGK-----------T---TPEGKV--LETDQDVVLYLLDSAGVAVVQGTAYGLSPYFRLSI  380 (402)
T ss_pred             ccc-CCCcceEEeeeccccccc-----------c---cccccC--CCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEe
Confidence            765 556666555332110000           0   000000  001234454443 4577666555554457999999


Q ss_pred             cCCCCcHHHHHHHHHHHHHHHHh
Q 037144          479 GNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       479 ~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      +.   ++++++++++.|.++.++
T Consensus       381 ~~---~~e~l~~~l~~l~~~l~~  400 (402)
T PRK06107        381 AT---SLETLEEACARIERAVAA  400 (402)
T ss_pred             CC---CHHHHHHHHHHHHHHHHh
Confidence            84   577999999999988765

>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative

Probab=99.84  E-value=2e-18  Score=176.64  Aligned_cols=305  Identities=10%  Similarity=0.043  Sum_probs=195.4

Q ss_pred             ccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCch
Q 037144          107 DWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHC  186 (502)
Q Consensus       107 ~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~  186 (502)
                      .|....+...+..++.+++++++|.+.        . ++.++|+++++.++.+...           ++++|+++...|.
T Consensus        69 ~~~~~~g~~~l~~~l~~~l~~~~g~~~--------~-i~~~sG~~a~~~a~~~~~~-----------~gd~vi~~~~~~~  128 (385)
T TIGR01825        69 AVRTIAGTLRLHEELEEKLAKFKKTEA--------A-LVFQSGFNTNQGVLSALLR-----------KGDIVLSDELNHA  128 (385)
T ss_pred             ccCcccCCcHHHHHHHHHHHHHhCCCc--------E-EEECcHHHHHHHHHHHhCC-----------CCCEEEEEccccH
Confidence            344444557788889999999998643        2 4445558888877665533           5678888889999


Q ss_pred             hHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEE
Q 037144          187 AFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWV  266 (502)
Q Consensus       187 s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~l  266 (502)
                      ++..++...|.   .++.++       .+|++++++.+.+...  .+..+|+.....+++|.+.|+++|.++|++||+|+
T Consensus       129 ~~~~~~~~~g~---~~~~~~-------~~d~~~l~~~l~~~~~--~~~~~v~~~~v~~~tG~~~~~~~i~~l~~~~~~~l  196 (385)
T TIGR01825       129 SIIDGLRLTKA---TKKIYK-------HADMDDLDRVLRENPS--YGKKLIVTDGVFSMDGDVAPLPEIVELAERYGAVT  196 (385)
T ss_pred             HHHHHHHhcCC---ceEEeC-------CCCHHHHHHHHHhhcc--CCCeEEEEecCCcCCCCccCHHHHHHHHHHhCCEE
Confidence            99888888887   766553       5789999998875431  12456777777899999999999999999999999


Q ss_pred             EeecccccccccCccc--hhhhcCC-CCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcC-CcccccCccCCCCCcc
Q 037144          267 HVDAAYAGSACICPEF--RHFIDGV-ECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLST-NPQYLKNEATDQEPKE  342 (502)
Q Consensus       267 hVDaA~g~~~~~~~~~--~~~~~~~-~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~  342 (502)
                      ++|++|+.+.+.....  ...+ ++ .+.|.+..++||+++.+.  |+++. ++.... .+.. ...|....        
T Consensus       197 i~De~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~s~sK~~~~~g--G~~~~-~~~~~~-~~~~~~~~~~~~~--------  263 (385)
T TIGR01825       197 YVDDAHGSGVMGEAGRGTVHHF-GLEDKVDIQVGTLSKAIGVVG--GYAAG-HKELIE-YLKNRARPFLFST--------  263 (385)
T ss_pred             EEECcccccCcCCCCCccHhhc-CCCcCCcEEEEeccHHhhcCC--CEEec-CHHHHH-HHHHhCccccccC--------
Confidence            9999997654421110  0001 11 357788899999997542  55543 333322 2211 11121110        


Q ss_pred             cccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhh
Q 037144          343 QEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDK  422 (502)
Q Consensus       343 ~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~  422 (502)
                                 .+......++..+++.+..  ..+..++..++++++.+.|+++ ++++. .+..+++.+...+.     
T Consensus       264 -----------~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~-----  323 (385)
T TIGR01825       264 -----------AQPPAVVAALAAAVDELQR--SPELMERLWDNTRFFKAGLGKL-GYDTG-GSETPITPVVIGDE-----  323 (385)
T ss_pred             -----------CCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHc-CCCCC-CCCCCEEEEEECCH-----
Confidence                       0000111233334443211  1346677778899999999887 78776 34445555554221     


Q ss_pred             hhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeE----CCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144          423 LRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIV----GGIYVLRFAAGNSMTMESHVRAAWTVVQEH  498 (502)
Q Consensus       423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~----~g~~~lR~~~~~~~t~~~di~~~~~~l~~~  498 (502)
                                             .....+.+.|.++|.. +.+..+    .+..++|+++. ...++++|++++++|+++
T Consensus       324 -----------------------~~~~~~~~~L~~~gi~-v~~~~~~~~~~~~~~iRi~~~-~~~~~e~i~~~~~~l~~~  378 (385)
T TIGR01825       324 -----------------------KAAQEFSRRLFDEGIF-AQSIVFPTVPRGTARIRNIPT-AEHTKDDLDQALDAYEKV  378 (385)
T ss_pred             -----------------------HHHHHHHHHHHHCCcE-EcccCCCCCCCCCceEEEEEc-CCCCHHHHHHHHHHHHHH
Confidence                                   1134677777777764 333222    23468999875 446777999999999988


Q ss_pred             HHh
Q 037144          499 LEA  501 (502)
Q Consensus       499 ~~~  501 (502)
                      .++
T Consensus       379 ~~~  381 (385)
T TIGR01825       379 GKE  381 (385)
T ss_pred             HHH
Confidence            754

This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.

>PRK07550 hypothetical protein; Provisional

Probab=99.84  E-value=1.9e-18  Score=176.69  Aligned_cols=329  Identities=11%  Similarity=0.021  Sum_probs=208.2

Q ss_pred             HHHHHHHHHhhc-CCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHh
Q 037144           90 AGIVGEMLSSGF-NVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKI  168 (502)
Q Consensus        90 ~~~~~~~l~~~~-n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~  168 (502)
                      +..+.+.+...+ +.....|...++..++++.+++++.+..|..-..     ...++|+|+++++..++.+...      
T Consensus        44 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~-----~~i~~t~G~~~al~~~~~~l~~------  112 (386)
T PRK07550         44 PPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSRLYGAAISP-----EQVHITSGCNQAFWAAMVTLAG------  112 (386)
T ss_pred             CHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCc-----ceEEEecCcHHHHHHHHHHhcC------
Confidence            444555555443 2233446555678999999999999988864221     2688899988888666555432      


Q ss_pred             CccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144          169 GRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA  248 (502)
Q Consensus       169 ~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~  248 (502)
                           +++.|+++...|..+...++..|+   +++.++++++.++.+|+++|++++++.+      .+|+++.++|+||.
T Consensus       113 -----~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~~~~l~~~~~~~~------~~v~~~~P~NPtG~  178 (386)
T PRK07550        113 -----AGDEVILPLPWYFNHKMWLDMLGI---RPVYLPCDEGPGLLPDPAAAEALITPRT------RAIALVTPNNPTGV  178 (386)
T ss_pred             -----CCCEEEEcCCCCcchHHHHHhcCC---EEEEEecCCCcCCCCCHHHHHHHhcccC------cEEEEeCCCCCCCc
Confidence                 677899998888888888899999   9999999754457789999999997543      25667779999999


Q ss_pred             cCC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCC-CC-CeeEEccCCcCC-CCCcceEEEeeCchhhhh
Q 037144          249 VDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE-CV-DSFSFNPHKWLF-TTLDCCCLWVKDPSCLLS  322 (502)
Q Consensus       249 idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~-~a-Dsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~  322 (502)
                      +-+   +++|+++|++||+++++|.+|+.+..........+.... .. ..+..+++|.++ .....|+++..+ ..+..
T Consensus       179 ~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~~~~-~~~~~  257 (386)
T PRK07550        179 VYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVVASP-ARIAE  257 (386)
T ss_pred             ccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCcccceEeeecCH-HHHHH
Confidence            855   889999999999999999999765321111111111100 11 244678999997 445677777643 22221


Q ss_pred             hhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc--HHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 037144          323 TLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG--VANLRNFIRSHVGMAKLFERLVTSDKRFE  400 (502)
Q Consensus       323 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g--~~g~~~~~~~~~~la~~l~~~l~~~~~~~  400 (502)
                      ..    .+....                +. +   ...+..+++.+.+.  .+..++..++..++++++.+.|.+.+++.
T Consensus       258 ~~----~~~~~~----------------~~-~---~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~  313 (386)
T PRK07550        258 IE----KFMDTV----------------AI-C---APRIGQIAVAWGLPNLADWRAGNRAEIARRRDAFRAVFARLPGWE  313 (386)
T ss_pred             HH----HHHhhc----------------cc-C---CCcHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhCCCce
Confidence            11    111100                00 0   01222333333322  34455666777888889999998876776


Q ss_pred             EecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeEC--CEEEEEEE
Q 037144          401 VAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVG--GIYVLRFA  477 (502)
Q Consensus       401 l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lR~~  477 (502)
                      +. +....++++++...+.                           ...++.+++. +.|..+.++..+.  +..++|++
T Consensus       314 ~~-~~g~~~~~~~~~~~~~---------------------------~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis  365 (386)
T PRK07550        314 LL-ASGAYFAYVRHPFPDR---------------------------PSREVARRLAKEAGILCLPGTMFGPGQEGYLRLA  365 (386)
T ss_pred             eC-CCceEEEEecCCCCCC---------------------------CHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEE
Confidence            53 3333344444432111                           0245666654 4576554443332  35689999


Q ss_pred             ecCCCCcHHHHHHHHHHHHHH
Q 037144          478 AGNSMTMESHVRAAWTVVQEH  498 (502)
Q Consensus       478 ~~~~~t~~~di~~~~~~l~~~  498 (502)
                      ++.  .++++++++++.|.+.
T Consensus       366 ~~~--~~~~~~~~~~~~l~~~  384 (386)
T PRK07550        366 FAN--ADVAGIGELVERLRAF  384 (386)
T ss_pred             eec--CCHHHHHHHHHHHHhh
Confidence            964  3577999999998875

>PRK08068 transaminase; Reviewed

Probab=99.84  E-value=2e-18  Score=176.68  Aligned_cols=323  Identities=11%  Similarity=0.010  Sum_probs=207.0

Q ss_pred             HHHHHHHhhcCCC-CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCC-cEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144           92 IVGEMLSSGFNVV-GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNG-GGVIQGTTCEALLCTLTAARDRVLKKIG  169 (502)
Q Consensus        92 ~~~~~l~~~~n~~-~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~-~g~~t~ggt~a~~~al~~a~~~~~~~~~  169 (502)
                      .+.+.+...++.. ...|...++..++.+++++|+.+.+|.+-..     . ..++|+|+++++..++.+...       
T Consensus        49 ~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~-----~~~i~it~G~~~~l~~~~~~~~~-------  116 (389)
T PRK08068         49 HIVEALQEAAENPANHKYSPFRGYPFLKEAAADFYKREYGVTLDP-----ETEVAILFGGKAGLVELPQCLMN-------  116 (389)
T ss_pred             HHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC-----CccEEEcCCcHHHHHHHHHHhCC-------
Confidence            3455555555432 3356556677899999999998888864221     2 478899998888665544322       


Q ss_pred             ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144          170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV  249 (502)
Q Consensus       170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i  249 (502)
                          +++.|++..++|..+..+++..|+   +++.+|++.+.++.+|+++|++++.+.+      .+|+++.++|+||.+
T Consensus       117 ----~gd~vlv~~P~y~~~~~~~~~~g~---~~~~i~~~~~~~~~~d~~~l~~~~~~~~------~~v~l~~P~NPTG~~  183 (389)
T PRK08068        117 ----PGDTILVPDPGYPDYLSGVALARA---QFETMPLIAENNFLPDYTKIPEEVAEKA------KLMYLNYPNNPTGAV  183 (389)
T ss_pred             ----CCCEEEEcCCCCcchHHHHHhcCC---EEEEeecccccCCCCCHHHHHHhccccc------eEEEEECCCCCCCCc
Confidence                677888999999999999999999   9999999754457899999999885432      377788899999999


Q ss_pred             CCh---hHHHHHHHHhCCEEEeecccccccccCccchhhhcCC--CCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhh
Q 037144          250 DPL---KPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGV--ECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLST  323 (502)
Q Consensus       250 dpl---~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~--~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~  323 (502)
                      -+.   ++|+++|++|++++++|.+|+................  ..-..++.++.|.++ ....+|+++. ++..+. .
T Consensus       184 ~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~-~~~l~~-~  261 (389)
T PRK08068        184 ATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAVG-NESVIE-A  261 (389)
T ss_pred             CCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCccceeEeEec-CHHHHH-H
Confidence            665   6788889999999999999966433211111111111  112356678999996 4456788764 443332 2


Q ss_pred             hcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 037144          324 LSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSDKRFEV  401 (502)
Q Consensus       324 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l  401 (502)
                      +.....++..                     +  ..+....++...+  +.+.+++.++++.+.++++.+.|++. ++.+
T Consensus       262 l~~~~~~~~~---------------------~--~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~-g~~~  317 (389)
T PRK08068        262 INLLQDHLFV---------------------S--LFGAIQDAAIEALLSDQSCVAELVARYESRRNAFISACREI-GWEV  317 (389)
T ss_pred             HHHHHhhccC---------------------C--CChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCcc
Confidence            2111111100                     0  0111112222222  34667788888899999999999887 6765


Q ss_pred             ecCCCeeEE-EEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh-cCcEEEEeeeEC--CEEEEEEE
Q 037144          402 AFPRNFSLV-CFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV-SGKVFMTHAIVG--GIYVLRFA  477 (502)
Q Consensus       402 ~~~~~~~~v-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--g~~~lR~~  477 (502)
                      . +|..+++ ++.+++. .                           ...++.+.+.+ .|..+..+..+.  +..++|++
T Consensus       318 ~-~~~g~~~~~v~~~~~-~---------------------------~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~  368 (389)
T PRK08068        318 D-APKGSFFAWMPVPKG-Y---------------------------TSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVG  368 (389)
T ss_pred             c-CCCeeEEEEEECCCC-C---------------------------CHHHHHHHHHHhCCEEEecchHhCccCCCeEEEE
Confidence            4 5666654 4444321 1                           02456777765 476544443332  35699999


Q ss_pred             ecCCCCcHHHHHHHHHHHHH
Q 037144          478 AGNSMTMESHVRAAWTVVQE  497 (502)
Q Consensus       478 ~~~~~t~~~di~~~~~~l~~  497 (502)
                      ++   ++++.+..+++.|.+
T Consensus       369 ~~---~~~~~l~~al~~l~~  385 (389)
T PRK08068        369 LL---TDEERLREAVERIGK  385 (389)
T ss_pred             Ec---CCHHHHHHHHHHHHH
Confidence            96   245677777777655

>PRK13393 5-aminolevulinate synthase; Provisional

Probab=99.84  E-value=2.1e-18  Score=177.54  Aligned_cols=298  Identities=10%  Similarity=0.070  Sum_probs=190.4

Q ss_pred             HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144          116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV  195 (502)
Q Consensus       116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~  195 (502)
                      ....++.+.+++++|.+         ..+++++|++||..++......         .++.+|+++...|.++..+++..
T Consensus        90 ~~~~~le~~la~~~g~~---------~~~~~~SG~~An~~ai~~l~~~---------~~g~~I~~~~~~H~s~~~~~~~~  151 (406)
T PRK13393         90 HYHVLLEAELADLHGKE---------AALLFTSGYVSNWAALSTLGSR---------LPGCVILSDELNHASMIEGIRHS  151 (406)
T ss_pred             HHHHHHHHHHHHHhCCC---------cEEEeCCcHHHHHHHHHHhhcC---------CCCCEEEEccchhHHHHHHHHHc
Confidence            34555667788888864         3567777788998888743221         04567888888999999998888


Q ss_pred             CCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccc
Q 037144          196 GIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGS  275 (502)
Q Consensus       196 Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~  275 (502)
                      |.   +++.++.       .|++++++.++...  ...+.+|+++...+++|.+.|+++|.++|+++|++++||++|+.+
T Consensus       152 g~---~~~~~~~-------~d~~~l~~~l~~~~--~~~~~~v~~~~v~~~~G~~~~l~~i~~l~~~~~~~livDea~~~g  219 (406)
T PRK13393        152 RA---EKRIFRH-------NDPADLERKLSDLD--PHRPKLVAFESVYSMDGDIAPIAEICDVAEKHGAMTYLDEVHAVG  219 (406)
T ss_pred             CC---eEEEeCC-------CCHHHHHHHHHhcc--CCCCEEEEEcCCCCCCCchhCHHHHHHHHHHcCCEEEEECCcccc
Confidence            87   7777764       37788888876431  123457888889999999999999999999999999999999744


Q ss_pred             cccCccchhh--hcC-CCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccc
Q 037144          276 ACICPEFRHF--IDG-VECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQI  352 (502)
Q Consensus       276 ~~~~~~~~~~--~~~-~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~  352 (502)
                      .+ .+.....  ..+ .+..|.+..++.|.++.+.  |+++. ++............|...                   
T Consensus       220 ~~-g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~G--G~~~~-~~~~~~~l~~~~~~~~~t-------------------  276 (406)
T PRK13393        220 LY-GPRGGGIAEREGLADRLTIIEGTLAKAFGVMG--GYITG-SAALCDFIRSFASGFIFT-------------------  276 (406)
T ss_pred             cc-CCCCCchhhhcCCCCCCeEEEEeCchhhcccC--ceeeC-CHHHHHHHHHhCcCceec-------------------
Confidence            42 1211111  111 2246777778999998653  55443 333322111111122211                   


Q ss_pred             cCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCC
Q 037144          353 TLCRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGT  431 (502)
Q Consensus       353 ~~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~  431 (502)
                       .+.. ..+..+.++++.+...+  ...++..+++++|++.|++. +++++ ++..+++.+....               
T Consensus       277 -~~~~p~~~aa~~aaL~~~~~~~--~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~i~~v~~~~---------------  336 (406)
T PRK13393        277 -TSLPPAVAAGALASVRHLKASS--AERERHQDRVARLRARLDKA-GIPHL-PNPSHIVPVMVGD---------------  336 (406)
T ss_pred             -CccCHHHHHHHHHHHHHHhhCH--HHHHHHHHHHHHHHHHHHHc-CCCcC-CCCCCeEEEEeCC---------------
Confidence             1111 12234445555542222  23356678899999999886 77765 4556666664421               


Q ss_pred             cccccccchhHhhHHHHHHHHHHHHhc-CcEEEEee----eECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          432 YDQYRQFSEEERTNEFNRELLESINVS-GKVFMTHA----IVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       432 ~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~----~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                                   .....++.++|.++ |.+ +.+.    ...+...+|+++. ...+++||++++++|+++.++
T Consensus       337 -------------~~~~~~l~~~L~~~~Gi~-v~~~~~p~~p~g~~~iRis~~-~~~t~edid~l~~~l~~~~~~  396 (406)
T PRK13393        337 -------------PVLCKQISDELLDRYGIY-VQPINYPTVPRGTERLRITPS-PLHTDADIEHLVQALSEIWAR  396 (406)
T ss_pred             -------------HHHHHHHHHHHHHhCCEE-EEeECCCCCCCCCceEEEEEC-CCCCHHHHHHHHHHHHHHHHh
Confidence                         11235677777764 754 3332    2235578999986 445677999999999988654

>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional

Probab=99.84  E-value=3.8e-18  Score=176.55  Aligned_cols=332  Identities=14%  Similarity=0.101  Sum_probs=197.8

Q ss_pred             HHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccC
Q 037144           93 VGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGREN  172 (502)
Q Consensus        93 ~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~  172 (502)
                      +.+...+.+..+...|..+++..++++.+.+++    |.+         .+++|+||++|+..++.+..+          
T Consensus        59 ~~~a~~~a~~~g~~~Y~~~~g~~~Lreaia~~~----~~~---------~vv~t~ggt~A~~~~~~all~----------  115 (460)
T PRK13238         59 MSDRQWAAMMRGDEAYAGSRSYYRLEDAVKDIF----GYP---------YTIPTHQGRAAEQILFPVLIK----------  115 (460)
T ss_pred             hhHHHHHHHHhCCcccCCCCCHHHHHHHHHHHh----CCC---------cEEECCCHHHHHHHHHHHhCC----------
Confidence            444444444344457888889999988765554    543         379999999999887766543          


Q ss_pred             CCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCC------CC--cccCHHHHHHHHHHHHhcCCccEEEEEecCCc
Q 037144          173 ISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKS------SS--YGLSAESVLSQINLDVEAELIPLFLCATVGTT  244 (502)
Q Consensus       173 ~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~------~~--~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt  244 (502)
                       +++ |+++...+.+....+.+.|.   +++.+|+++.      ++  |.+|+++|+++|++...  .++.+|+++.++|
T Consensus       116 -pGD-Vii~~p~~~~~~~~i~~~G~---~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~--~~tk~Ivl~~p~N  188 (460)
T PRK13238        116 -KGD-VVPSNYHFDTTRAHIELNGA---TAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVGA--ENVPFIVMTITNN  188 (460)
T ss_pred             -CCC-EEccCCcccchHHHHHHcCC---EEEEEeccccccccccccccCCcCHHHHHHHHhhcCC--CceeEEEEecCCC
Confidence             566 66665533455556788899   9999998641      12  45999999999975321  1245899999999


Q ss_pred             ccc-cc---CChhHHHHHHHHhCCEEEeecccccc-cccCc----cchhh-hc-----CCCCCCeeEEccCCcCCCCCcc
Q 037144          245 AIT-AV---DPLKPLCDVAKQFGIWVHVDAAYAGS-ACICP----EFRHF-ID-----GVECVDSFSFNPHKWLFTTLDC  309 (502)
Q Consensus       245 ~~G-~i---dpl~eI~~i~~~~g~~lhVDaA~g~~-~~~~~----~~~~~-~~-----~~~~aDsi~~~~hK~l~~p~~~  309 (502)
                      ++| .+   +++++|+++|++||+++++|+|+... .++..    .+... +.     -.+.+|++++++||.+++|.| 
T Consensus       189 ptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~~~G-  267 (460)
T PRK13238        189 SAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAMVNIG-  267 (460)
T ss_pred             CCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcEEEEecccCCCCcce-
Confidence            998 44   56789999999999999999987432 22211    11111 00     014689999999999999875 


Q ss_pred             eEEEeeCchhhhhhhcCC---cccccCccCCCCCcccccCCCcccccCCCCCC-chHHHHHHHH-hcHHHHHHHHHHHHH
Q 037144          310 CCLWVKDPSCLLSTLSTN---PQYLKNEATDQEPKEQEVGYKDWQITLCRRFR-SLKLWVVIRN-FGVANLRNFIRSHVG  384 (502)
Q Consensus       310 g~~~~r~~~~l~~~~~~~---~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~-al~~~~~l~~-~g~~g~~~~~~~~~~  384 (502)
                      |++++++.......-...   ..|+.                    .++-... ..++..+++. ...+    ..+...+
T Consensus       268 G~i~~~d~~l~~~~~~~~~~~~g~~t--------------------~~g~~~~~~~Ala~~l~e~~~~~----~~~~~~~  323 (460)
T PRK13238        268 GLLCFRDEDLFTECRTLCILYEGFPT--------------------YGGLAGRDMEALAVGLYEGMDED----YLAYRIG  323 (460)
T ss_pred             eEEEcChHHHHHHhhhcccccCCccc--------------------ccCcHHHHHHHHHhhHHHhhChH----HHHHHHH
Confidence            777777654433221111   01110                    0110001 1122222222 1222    3333444


Q ss_pred             HHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh-cCcEEE
Q 037144          385 MAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV-SGKVFM  463 (502)
Q Consensus       385 la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~  463 (502)
                      .+++|.+.|++. |+.++.|.. +..+|.-...-..          +.       ......  ...++.+|.+ .|...+
T Consensus       324 ~~~~l~~~L~~~-G~~~~~p~G-g~~v~~d~~~~~~----------~~-------~~~~~~--~~~~a~~L~~e~GV~~~  382 (460)
T PRK13238        324 QVEYLGEGLEEA-GVPIQTPAG-GHAVFVDAGKFLP----------HI-------PAEQFP--AQALACELYLEAGIRGV  382 (460)
T ss_pred             HHHHHHHHHHHC-CCCeEccCC-ceEEEEEchhcCC----------CC-------CCCCCc--hHHHHHHHHHHcCeeee
Confidence            679999999887 899885443 3333322111000          00       000000  1234444443 355544


Q ss_pred             EeeeE-------CC------EEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144          464 THAIV-------GG------IYVLRFAAGNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       464 ~~~~~-------~g------~~~lR~~~~~~~t~~~di~~~~~~l~~~~~  500 (502)
                      ..+.+       .+      ...+|+++.-..-+.++++.+.+.|+++.+
T Consensus       383 ~~~~f~~~~~~~~~~~~~~~~~~~Rla~~rr~~~~~~~~~~~~~l~~~~~  432 (460)
T PRK13238        383 EIGSLLLGRDPKTGEQLPAPAELLRLAIPRRVYTQSHMDYVAEALKAVKE  432 (460)
T ss_pred             cccceecccCCCCccccCCccceEEEecccccCCHHHHHHHHHHHHHHHH
Confidence            44322       12      478999987433467799999999998764

>PLN03227 serine palmitoyltransferase-like protein; Provisional

Probab=99.84  E-value=8.2e-18  Score=171.65  Aligned_cols=306  Identities=10%  Similarity=0.054  Sum_probs=187.1

Q ss_pred             HHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCC
Q 037144          118 ENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGI  197 (502)
Q Consensus       118 e~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Gl  197 (502)
                      ..++.+.+++++|.++         .++.++|+.++..++.+...           +++.|++++..|.|+..++.+.+.
T Consensus        45 ~~~LE~~lA~~~g~e~---------al~~~sG~~a~~~~i~~l~~-----------~GD~Vl~~~~~h~s~~~~~~l~~~  104 (392)
T PLN03227         45 HLELEQCMAEFLGTES---------AILYSDGASTTSSTVAAFAK-----------RGDLLVVDRGVNEALLVGVSLSRA  104 (392)
T ss_pred             HHHHHHHHHHHhCCCc---------EEEecCcHHHHHHHHHHhCC-----------CCCEEEEeccccHHHHHHHHHcCC
Confidence            3344455778888753         46677777788766655422           788999999999999998888887


Q ss_pred             CCCCEEEEecCCCCCcccCHHHHHHHHHHHHh--------cCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEee
Q 037144          198 DRKNIRAIKTTKSSSYGLSAESVLSQINLDVE--------AELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVD  269 (502)
Q Consensus       198 g~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~--------~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVD  269 (502)
                         +++.++.+       |++++++.++....        ...++.+|++....+++|.+-|+++|.++|++||+++++|
T Consensus       105 ---~~~~~~~~-------d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~l~~i~~l~~~~g~~livD  174 (392)
T PLN03227        105 ---NVRWFRHN-------DMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAPLKELVALKEEFHYRLILD  174 (392)
T ss_pred             ---eEEEeCCC-------CHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccCHHHHHHHHHHcCCEEEEE
Confidence               77777753       45555554433221        1123567888888899999999999999999999999999


Q ss_pred             cccccccccCccchhh-----hcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhc-CCcccccCccCCCCCccc
Q 037144          270 AAYAGSACICPEFRHF-----IDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLS-TNPQYLKNEATDQEPKEQ  343 (502)
Q Consensus       270 aA~g~~~~~~~~~~~~-----~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~-~~~~yl~~~~~~~~~~~~  343 (502)
                      .+|+.+.+ ....+..     +....++|.++.+.+|+++ |. .|+++. ++... +.+. ....+.+.          
T Consensus       175 e~~~~g~~-g~~G~g~~~~~g~~p~~~~Div~~slsk~~g-~~-gg~v~~-~~~~~-~~~~~~~~~~~~~----------  239 (392)
T PLN03227        175 ESFSFGTL-GKSGRGSLEHAGLKPMVHAEIVTFSLENAFG-SV-GGMTVG-SEEVV-DHQRLSGSGYCFS----------  239 (392)
T ss_pred             Cccccccc-CCCCCcHHHHcCCCCCCCceEEEeechhhhh-cc-CcEEec-CHHHH-HHHHHhCcCcccc----------
Confidence            99973322 1111111     1113478999999999875 32 344443 33322 1221 11111111          


Q ss_pred             ccCCCcccccCCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeE----------EecCCCeeEEEE
Q 037144          344 EVGYKDWQITLCRRFRSLKLWVVIRNF-GVANLRNFIRSHVGMAKLFERLVTSDKRFE----------VAFPRNFSLVCF  412 (502)
Q Consensus       344 ~~~~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~la~~l~~~l~~~~~~~----------l~~~~~~~~v~f  412 (502)
                                .  ...++.+|+++..+ ......+++++..+++++|++.|++. ++.          +......+++.+
T Consensus       240 ----------~--~~~p~~~~aa~~al~~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~rg~~~~~~~~~~~i~~i  306 (392)
T PLN03227        240 ----------A--SAPPFLAKADATATAGELAGPQLLNRLHDSIANLYSTLTNS-SHPYALKLRNRLVITSDPISPIIYL  306 (392)
T ss_pred             ----------C--CCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhc-CCccccccccccccCCCCCCCEEEE
Confidence                      1  11223344444332 11123567888899999999999753 332          122334667777


Q ss_pred             EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEee-------eECCEEEEEEEecCCCCcH
Q 037144          413 RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHA-------IVGGIYVLRFAAGNSMTME  485 (502)
Q Consensus       413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-------~~~g~~~lR~~~~~~~t~~  485 (502)
                      .+.+....                   ..........++.+++.++|.+.....       ..-....+|++++..+| +
T Consensus       307 ~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t-~  366 (392)
T PLN03227        307 RLSDQEAT-------------------RRTDETLILDQIAHHSLSEGVAVVSTGGHVKKFLQLVPPPCLRVVANASHT-R  366 (392)
T ss_pred             EeCCHHHh-------------------hhhhhhhHHHHHHHHHHHCCCEEEecccccCCcCCCCCCceEEEEecCCCC-H
Confidence            76432100                   000001233577888888897543211       11224679999876655 5


Q ss_pred             HHHHHHHHHHHHHHHh
Q 037144          486 SHVRAAWTVVQEHLEA  501 (502)
Q Consensus       486 ~di~~~~~~l~~~~~~  501 (502)
                      +||+++++.|+++.++
T Consensus       367 eei~~~~~~l~~~~~~  382 (392)
T PLN03227        367 EDIDKLLTVLGEAVEA  382 (392)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            5999999999998764

>TIGR00858 bioF 8-amino-7-oxononanoate synthase

Probab=99.84  E-value=2.1e-18  Score=174.56  Aligned_cols=292  Identities=12%  Similarity=0.053  Sum_probs=185.6

Q ss_pred             HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144          116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV  195 (502)
Q Consensus       116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~  195 (502)
                      .+..++.+.+++++|.+.         .+++++|+++++.++.+...           ++++|+++...|.+...+++..
T Consensus        61 ~~~~~l~~~la~~~~~~~---------~i~~~~G~~~~~~~l~~~~~-----------~gd~v~~~~~~~~~~~~~~~~~  120 (360)
T TIGR00858        61 PLHEELEEELAEWKGTEA---------ALLFSSGYLANVGVISALVG-----------KGDLILSDALNHASLIDGCRLS  120 (360)
T ss_pred             HHHHHHHHHHHHHhCCCC---------EEEECchHHHHHHHHHHhCC-----------CCCEEEEEccccHHHHHHHHhc
Confidence            344455566777777542         45556668887765544322           5678888999999999999999


Q ss_pred             CCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccc
Q 037144          196 GIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGS  275 (502)
Q Consensus       196 Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~  275 (502)
                      |+   +++.++.       +|+++|++.+++..  +.++.+|+.....+++|.+.|+++|.++|+++|+++++|++|+.+
T Consensus       121 g~---~~~~~~~-------~d~~~l~~~~~~~~--~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~li~De~~~~~  188 (360)
T TIGR00858       121 GA---RVRRYRH-------NDVEHLERLLEKNR--GERRKLIVTDGVFSMDGDIAPLPQLVALAERYGAWLMVDDAHGTG  188 (360)
T ss_pred             CC---ceEEecC-------CCHHHHHHHHHHcc--cCCCeEEEEeCCccCCCCCcCHHHHHHHHHHcCcEEEEECccccc
Confidence            98   8887763       58899999986532  112346777778889999999999999999999999999999754


Q ss_pred             cccCccch-hhhcCC--CCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcC-CcccccCccCCCCCcccccCCCccc
Q 037144          276 ACICPEFR-HFIDGV--ECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLST-NPQYLKNEATDQEPKEQEVGYKDWQ  351 (502)
Q Consensus       276 ~~~~~~~~-~~~~~~--~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~  351 (502)
                      .+...... ....++  ...|++..++||+++.+ | |+++. ++.... .+.. ...+..                   
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~-g-G~~~~-~~~~~~-~~~~~~~~~~~-------------------  245 (360)
T TIGR00858       189 VLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGSY-G-AYVAG-SQALID-YLINRARTLIF-------------------  245 (360)
T ss_pred             CcCCCCCchHHhcCCCccCCcEEEEechhhhhcc-C-cEEEc-CHHHHH-HHHHhCcccee-------------------
Confidence            33211000 001122  25678888999999764 3 66554 333322 2211 111110                   


Q ss_pred             ccCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCC
Q 037144          352 ITLCRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNG  430 (502)
Q Consensus       352 ~~~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~  430 (502)
                       ..+.. ....++.++++.+  +...++.++..++++++.+.|+++ ++++. ++..+++.+.+...             
T Consensus       246 -~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~~~~~~-------------  307 (360)
T TIGR00858       246 -STALPPAVAAAALAALELI--QEEPWRREKLLALIARLRAGLEAL-GFTLM-PSCTPIVPVIIGDN-------------  307 (360)
T ss_pred             -cCCCCHHHHHHHHHHHHHH--hhCHHHHHHHHHHHHHHHHHHHHc-CCccC-CCCCCEEEEEeCCH-------------
Confidence             01111 1112333444433  223567788999999999999987 67765 45566776665321             


Q ss_pred             CcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeee---ECCEEEEEEEecCCCCcHHHHHHHHHHHH
Q 037144          431 TYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAI---VGGIYVLRFAAGNSMTMESHVRAAWTVVQ  496 (502)
Q Consensus       431 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~---~~g~~~lR~~~~~~~t~~~di~~~~~~l~  496 (502)
                                     ....++.++|.++|..+.....   ..+..++|++++.+ ++++++++++++|+
T Consensus       308 ---------------~~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~iRis~~~~-~~~~~i~~~l~~l~  360 (360)
T TIGR00858       308 ---------------ASALALAEELQQQGIFVGAIRPPTVPAGTSRLRLTLSAA-HTPGDIDRLAEALK  360 (360)
T ss_pred             ---------------HHHHHHHHHHHHCCeeEeeeCCCCCCCCCceEEEEEcCC-CCHHHHHHHHHhhC
Confidence                           1134677777777765433211   12346899998744 55679999998763

This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.

>PRK09265 aminotransferase AlaT; Validated

Probab=99.83  E-value=2.9e-18  Score=176.38  Aligned_cols=321  Identities=9%  Similarity=0.021  Sum_probs=198.7

Q ss_pred             cccccChhhHHHHHHHHHHHHHhc--CCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCC
Q 037144          106 LDWISSPAAVELENIVMDWLGQML--DLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQ  183 (502)
Q Consensus       106 ~~~~~~p~~~~le~~~~~~l~~l~--g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~  183 (502)
                      ..|....+..++.+.+.+|+....  +++.+       ..++|+|+++++..++.+...           +++.|+++..
T Consensus        66 ~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~-------~i~~t~G~~~~l~~~~~~~~~-----------~gd~Vlv~~p  127 (404)
T PRK09265         66 QGYSDSKGLFSARKAIMQYYQQKGIPDVDVD-------DIYIGNGVSELIVMAMQALLN-----------NGDEVLVPAP  127 (404)
T ss_pred             CCCCCCCCcHHHHHHHHHHHhccCCCCCCcc-------cEEEeCChHHHHHHHHHHhCC-----------CCCEEEEeCC
Confidence            356555556778888888876432  33332       688899998888666655432           5778888999


Q ss_pred             CchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hhHHHHHHH
Q 037144          184 THCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LKPLCDVAK  260 (502)
Q Consensus       184 ~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~eI~~i~~  260 (502)
                      +|..+..+++..|.   +++.++++.++++.+|+++|++++++.+      .+|+++.++|+||.+-+   +++|+++|+
T Consensus       128 ~y~~~~~~~~~~g~---~~v~~~~~~~~~~~~d~~~l~~~~~~~~------~~v~l~~P~NPtG~~~~~~~~~~i~~~a~  198 (404)
T PRK09265        128 DYPLWTAAVSLSGG---KPVHYLCDEEAGWFPDLDDIRSKITPRT------KAIVIINPNNPTGAVYSKELLEEIVEIAR  198 (404)
T ss_pred             CCcChHHHHHHcCC---EEEEEecccccCCCCCHHHHHHhccccc------eEEEEECCCCCCCcCCCHHHHHHHHHHHH
Confidence            99999999999998   8999988754457899999999886543      37888899999999977   899999999


Q ss_pred             HhCCEEEeecccccccccCccchhhhcCCCCCCeeE-EccCCcCCC-CCcceEEEee-CchhhhhhhcCCcccccCccCC
Q 037144          261 QFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFS-FNPHKWLFT-TLDCCCLWVK-DPSCLLSTLSTNPQYLKNEATD  337 (502)
Q Consensus       261 ~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~-~~~hK~l~~-p~~~g~~~~r-~~~~l~~~~~~~~~yl~~~~~~  337 (502)
                      ++|+++++|.+|+..............-......++ .++.|.++. ...+|+++.. +........... ..+....  
T Consensus       199 ~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~-~~~~~~~--  275 (404)
T PRK09265        199 QHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVGWMVLSGPKKHAKGYIEGL-DMLASMR--  275 (404)
T ss_pred             HCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchhhccCcccceEEEEEeCchHHHHHHHHHH-HHHhccc--
Confidence            999999999999765432111111111111223454 457999954 4557888763 332111111000 0000000  


Q ss_pred             CCCcccccCCCcccccCCCCCCchHHHHHHHHhcH-HHHHHH---HHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEE-
Q 037144          338 QEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGV-ANLRNF---IRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCF-  412 (502)
Q Consensus       338 ~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~-~g~~~~---~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f-  412 (502)
                                  +      ....+...++...++. +.+.+.   .++..+.++.+.+.|++.+++++. +|..+++.| 
T Consensus       276 ------------~------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~-~p~~g~~l~~  336 (404)
T PRK09265        276 ------------L------CANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELLNAIPGVSCV-KPKGALYAFP  336 (404)
T ss_pred             ------------c------CCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCccc-CCCcceEEEE
Confidence                        0      0022233333333321 222222   235666788888899888888765 455555554 


Q ss_pred             EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC--CEEEEEEEecCCCCcHHHHHH
Q 037144          413 RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG--GIYVLRFAAGNSMTMESHVRA  490 (502)
Q Consensus       413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lR~~~~~~~t~~~di~~  490 (502)
                      ++++...                    ..   ......+.+.+.+.|..+.++..+.  +..++|+++.   .+++++++
T Consensus       337 ~~~~~~~--------------------~~---~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~~---~~~e~l~~  390 (404)
T PRK09265        337 KLDPKVY--------------------PI---HDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVTL---PRVDDLEE  390 (404)
T ss_pred             Eeccccc--------------------CC---CCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEeC---CCHHHHHH
Confidence            4432100                    00   0002234555666787655554442  3569999985   46779999


Q ss_pred             HHHHHHHHHHh
Q 037144          491 AWTVVQEHLEA  501 (502)
Q Consensus       491 ~~~~l~~~~~~  501 (502)
                      +++.|.++.+.
T Consensus       391 ~l~rl~~~l~~  401 (404)
T PRK09265        391 AIGRIGRFLSG  401 (404)
T ss_pred             HHHHHHHHHHH
Confidence            99999887664

>PRK14807 histidinol-phosphate aminotransferase; Provisional

Probab=99.83  E-value=8.1e-18  Score=169.77  Aligned_cols=285  Identities=12%  Similarity=0.055  Sum_probs=189.1

Q ss_pred             HHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCC
Q 037144          121 VMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRK  200 (502)
Q Consensus       121 ~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~  200 (502)
                      +++.++++++.+.+       ..++|+|+++++..++.+..+           +++.|+++...+..+...++..|+   
T Consensus        64 lr~~ia~~~~~~~~-------~i~it~G~~~~l~~~~~~l~~-----------~gd~Vlv~~p~y~~~~~~~~~~g~---  122 (351)
T PRK14807         64 LREELARYCSVVPT-------NIFVGNGSDEIIHLIMLAFIN-----------KGDVVIYPHPSFAMYSVYSKIAGA---  122 (351)
T ss_pred             HHHHHHHHhCCCcc-------cEEEecCHHHHHHHHHHHhcC-----------CCCEEEEeCCChHHHHHHHHHcCC---
Confidence            33445555677654       588999988887666554432           677888888888888888899999   


Q ss_pred             CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCc
Q 037144          201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICP  280 (502)
Q Consensus       201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~  280 (502)
                      +++.+++++  ++.+|++++++++++.     ++.+|+++.++|+||.+-+.+++.++|++++.++++|.+|+.+.  ..
T Consensus       123 ~~~~v~~~~--~~~~d~~~l~~~~~~~-----~~k~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y~~~~--~~  193 (351)
T PRK14807        123 VEIPVKLKE--DYTYDVGSFIKVIEKY-----QPKLVFLCNPNNPTGSVIEREDIIKIIEKSRGIVVVDEAYFEFY--GN  193 (351)
T ss_pred             eEEEeecCC--CCCCCHHHHHHHhhcc-----CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEeCcchhhc--cc
Confidence            999999874  4689999999998642     12367778999999999999999999999889999999996542  11


Q ss_pred             cchhhhcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCC
Q 037144          281 EFRHFIDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFR  359 (502)
Q Consensus       281 ~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~  359 (502)
                      .....+... .-..+..+++|.++ ....+|+++. ++... +.+......                   +.      ..
T Consensus       194 ~~~~~~~~~-~~vi~~~S~SK~~~~~GlRiG~~v~-~~~~~-~~~~~~~~~-------------------~~------~~  245 (351)
T PRK14807        194 TIVDVINEF-ENLIVLRTLSKAFGLAGLRVGYAVA-NENIL-KYLNLVKSP-------------------YN------IN  245 (351)
T ss_pred             chHHHhhhC-CCEEEEecchHhcccchhceeeeec-CHHHH-HHHHHccCC-------------------CC------cC
Confidence            111112111 11255567999997 5566777764 33332 222211000                   00      12


Q ss_pred             chHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccc
Q 037144          360 SLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFS  439 (502)
Q Consensus       360 al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  439 (502)
                      .+...++...+....+.+.+++..++++++.+.|++.+++++. ++..+.+.+++. .                      
T Consensus       246 ~~~q~~~~~~l~~~~~~~~~~~~~~~r~~l~~~l~~~~g~~~~-~~~~~~~~i~~~-~----------------------  301 (351)
T PRK14807        246 SLSQVIALKVLRTGVLKERVNYILNERERLIKELSKIPGIKVY-PSKTNFILVKFK-D----------------------  301 (351)
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-cCCccEEEEEcC-C----------------------
Confidence            2333444444434456777777888888999999888888764 555555444442 1                      


Q ss_pred             hhHhhHHHHHHHHHHHHhcCcEEEEeee-ECCEEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144          440 EEERTNEFNRELLESINVSGKVFMTHAI-VGGIYVLRFAAGNSMTMESHVRAAWTVVQEHL  499 (502)
Q Consensus       440 ~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~  499 (502)
                              ...+.+.+.+.|..+..... .....++|++++    ..++.++++++|+++.
T Consensus       302 --------~~~~~~~l~~~gV~v~~~~~~~~~~~~iRis~~----~~~~~~~l~~~l~~~~  350 (351)
T PRK14807        302 --------ADYVYQGLLERGILVRDFSKVEGLEGALRITVS----SCEANDYLINGLKELL  350 (351)
T ss_pred             --------HHHHHHHHHHCCEEEEECCCCCCCCCeEEEEcC----CHHHHHHHHHHHHHhh
Confidence                    23566777777865433221 123568999986    3468999999998753

>PRK08056 threonine-phosphate decarboxylase; Provisional

Probab=99.83  E-value=4e-18  Score=172.38  Aligned_cols=290  Identities=12%  Similarity=0.085  Sum_probs=188.6

Q ss_pred             HHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCC
Q 037144          119 NIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGID  198 (502)
Q Consensus       119 ~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg  198 (502)
                      .++++++++.+|++.+       ..++|+|+++++..++.+. .           ++.+++. .+.+..+...++..|+ 
T Consensus        58 ~~lr~~ia~~~~~~~~-------~i~it~Ga~~~l~~~~~~l-~-----------~g~viv~-~P~y~~~~~~~~~~g~-  116 (356)
T PRK08056         58 RHLHQALARHHQVPAS-------WILAGNGETESIFAVVSGL-K-----------PRRAMIV-TPGFAEYRRALQQVGC-  116 (356)
T ss_pred             HHHHHHHHHHhCcChh-------hEEECCCHHHHHHHHHHHh-C-----------CCCEEEe-CCCcHHHHHHHHHcCC-
Confidence            3566667777888654       5889999888876555432 1           3444444 4567778888899999 


Q ss_pred             CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hhHHHHHHHHhCCEEEeecccccc
Q 037144          199 RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGS  275 (502)
Q Consensus       199 ~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~eI~~i~~~~g~~lhVDaA~g~~  275 (502)
                        +++.+|+++++++.+| +++++.+.+.      +.+|+++.++|+||.+-+   +++|+++|+++++++++|++|..+
T Consensus       117 --~~~~v~~~~~~~~~~~-~~~~~~~~~~------~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~  187 (356)
T PRK08056        117 --EIRRYSLREADGWQLT-DAILEALTPD------LDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDF  187 (356)
T ss_pred             --eEEEEecccccCCCcc-HHHHHhccCC------CCEEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhcc
Confidence              9999998754445666 3454555422      237778899999999987   888999999999999999999765


Q ss_pred             cccCccchhhhcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccC
Q 037144          276 ACICPEFRHFIDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITL  354 (502)
Q Consensus       276 ~~~~~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~  354 (502)
                      .......-..+... ....++.+++|+++ ....+|+++..++..+.........+                    +   
T Consensus       188 ~~~~~~~~~~~~~~-~~~i~~~S~SK~~~~~G~RiG~~v~~~~~~~~~l~~~~~~~--------------------~---  243 (356)
T PRK08056        188 IPDETGFIPQLADN-PHLWVLRSLTKFYAIPGLRLGYLVNSDDAAVARMRRQQMPW--------------------S---  243 (356)
T ss_pred             CCcchHHHHHhccC-CCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhCCCC--------------------c---
Confidence            42211111112222 24567789999998 55778888775544332221111000                    0   


Q ss_pred             CCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcc
Q 037144          355 CRRFRSLKLWVVIRNF-GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYD  433 (502)
Q Consensus       355 sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~  433 (502)
                         ...+...++...+ +.+...+..++..+.++++.+.|++++++++. ++..+.+.++....                
T Consensus       244 ---~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~----------------  303 (356)
T PRK08056        244 ---INAFAALAGEVILQDRAYQQATWQWLAEEGARFYQALCALPLLTVW-PGRANYLFLRCERP----------------  303 (356)
T ss_pred             ---hhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEc-CCCCcEEEEEcCCC----------------
Confidence               0123333333333 34556666778889999999999998888765 55555555444321                


Q ss_pred             cccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECC--EEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144          434 QYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGG--IYVLRFAAGNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       434 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g--~~~lR~~~~~~~t~~~di~~~~~~l~~~~~  500 (502)
                                    ..++.+.|.+.|..+..+..+.+  ..++|++++    +.++.++++++|+++.+
T Consensus       304 --------------~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~~----~~~~~~~l~~~l~~~~~  354 (356)
T PRK08056        304 --------------DIDLQRALLTQRILIRSCANYPGLDSRYYRVAIR----SAAENERLLAALRNVLT  354 (356)
T ss_pred             --------------hHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEEc----CHHHHHHHHHHHHHHHc
Confidence                          13566777777875555444432  468999986    45689999999987653

>PRK05387 histidinol-phosphate aminotransferase; Provisional

Probab=99.83  E-value=6.1e-18  Score=170.91  Aligned_cols=310  Identities=15%  Similarity=0.065  Sum_probs=199.8

Q ss_pred             HHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCc
Q 037144           91 GIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGR  170 (502)
Q Consensus        91 ~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~  170 (502)
                      ..+.+.+...+......|. .+...    ++++.+++.++.+.+       ..++|+|+++++..++.+..+        
T Consensus        40 ~~~~~a~~~~~~~~~~~y~-~~~~~----~lr~aia~~~~~~~~-------~I~it~G~~~al~~~~~~l~~--------   99 (353)
T PRK05387         40 PKVLEAIRAALGDDLRLYP-DPNAD----ALRQAIAAYYGLDPE-------QVFVGNGSDEVLAHAFLAFFN--------   99 (353)
T ss_pred             HHHHHHHHHHhhhhhhcCC-CCcHH----HHHHHHHHHhCCCHH-------HEEEcCCHHHHHHHHHHHhcC--------
Confidence            3455555544432223342 22333    455666777787654       689999999998777766543        


Q ss_pred             cCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC
Q 037144          171 ENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD  250 (502)
Q Consensus       171 ~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id  250 (502)
                         +++.|+++.+.|..+...++..|+   +++.+|.++  ++.+|+++|++    ..      .+|+++.++|+||.+-
T Consensus       100 ---~gd~vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~----~~------~~v~~~~P~NPtG~~~  161 (353)
T PRK05387        100 ---HDRPLLFPDITYSFYPVYAGLYGI---PYEEIPLDD--DFSIDVEDYLR----PN------GGIIFPNPNAPTGIAL  161 (353)
T ss_pred             ---CCCEEEEeCCCHHHHHHHHHHcCC---EEEEeecCC--CCCCCHHHHHh----cC------CEEEEeCCCCCCCCCC
Confidence               677888898888778888899999   999999864  57899999863    11      2678889999999999


Q ss_pred             ChhHHHHHHHHh-CCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCc
Q 037144          251 PLKPLCDVAKQF-GIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNP  328 (502)
Q Consensus       251 pl~eI~~i~~~~-g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~  328 (502)
                      |.+++.++++++ ++++++|.+|..+.  ........... .-..++.+++|.++.| ..+|+++. ++.... .+....
T Consensus       162 ~~~~~~~l~~~~~~~~livDe~y~~~~--~~~~~~~~~~~-~~~i~~~S~SK~~~~~GlR~G~~~~-~~~~~~-~l~~~~  236 (353)
T PRK05387        162 PLAEIERILAANPDSVVVIDEAYVDFG--GESAIPLIDRY-PNLLVVQTFSKSRSLAGLRVGFAIG-HPELIE-ALNRVK  236 (353)
T ss_pred             CHHHHHHHHHhCCCcEEEEeCcccccC--CcchHHHHhhC-CCEEEEEehhHhhcchhhhceeeec-CHHHHH-HHHHhh
Confidence            999999999886 99999999995432  11111111111 2246777899998744 56777765 343322 221111


Q ss_pred             ccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCe
Q 037144          329 QYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG-VANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNF  407 (502)
Q Consensus       329 ~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~  407 (502)
                      .....                ++      ...+..+++...+. .+.+++..++..++++++.+.|++. ++++. ++..
T Consensus       237 ~~~~~----------------~~------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~  292 (353)
T PRK05387        237 NSFNS----------------YP------LDRLAQAGAIAAIEDEAYFEETRAKVIATRERLVEELEAL-GFEVL-PSKA  292 (353)
T ss_pred             ccCCC----------------CC------cCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeEC-CCcC
Confidence            00000                00      12233333334432 3556778888888999999999988 78764 4555


Q ss_pred             eEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHH
Q 037144          408 SLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESH  487 (502)
Q Consensus       408 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~d  487 (502)
                      +++++...+..                             ..++.+.+.++|..+..........++|++++    +.++
T Consensus       293 ~~~~~~~~~~~-----------------------------~~~~~~~l~~~gi~v~~~~~~~~~~~iRis~~----~~~~  339 (353)
T PRK05387        293 NFVFARHPSHD-----------------------------AAELAAKLRERGIIVRHFNKPRIDQFLRITIG----TDEE  339 (353)
T ss_pred             cEEEEECCCCC-----------------------------HHHHHHHHHHCCEEEEECCCCCCCCeEEEEeC----CHHH
Confidence            55554433210                             24566777777865432221123568999986    4579


Q ss_pred             HHHHHHHHHHHHH
Q 037144          488 VRAAWTVVQEHLE  500 (502)
Q Consensus       488 i~~~~~~l~~~~~  500 (502)
                      +++++++|+++..
T Consensus       340 ~~~~~~~L~~~~~  352 (353)
T PRK05387        340 MEALVDALKEILA  352 (353)
T ss_pred             HHHHHHHHHHHhh
Confidence            9999999998764

>PRK09276 LL-diaminopimelate aminotransferase; Provisional

Probab=99.83  E-value=4.3e-18  Score=174.12  Aligned_cols=326  Identities=13%  Similarity=0.072  Sum_probs=206.3

Q ss_pred             HHHHHHHHHhhcCCC-CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHh
Q 037144           90 AGIVGEMLSSGFNVV-GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKI  168 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~-~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~  168 (502)
                      +..+.+.+...+... ...|....+..++.+.+.+|+.+.+|.+.+.    ....++|+|+++++...+.+..+      
T Consensus        46 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~----~~~ii~t~G~~~~i~~~~~~~~~------  115 (385)
T PRK09276         46 PDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKRRFGVELDP----ETEVISLIGSKEGIAHIPLAFVN------  115 (385)
T ss_pred             CHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC----CCcEEEccCcHHHHHHHHHHhCC------
Confidence            445566666555322 2345544456789999999999888863221    01377789988888766554432      


Q ss_pred             CccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144          169 GRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA  248 (502)
Q Consensus       169 ~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~  248 (502)
                           +++.|+++.+++..+..+++..|+   +++.+|++.+..+.+|++++++++.+.+      .+|+++.++|+||.
T Consensus       116 -----~gd~Vl~~~P~y~~~~~~~~~~g~---~~~~v~~~~~~g~~~d~~~l~~~~~~~~------~~v~l~~p~NPtG~  181 (385)
T PRK09276        116 -----PGDVVLVPDPGYPVYKIGTIFAGG---EPYFMPLKEENGFLPDLDAIPEDVAKKA------KLMFINYPNNPTGA  181 (385)
T ss_pred             -----CCCEEEEcCCCCcChHHHHHHcCC---EEEEEecCCCCCCcCCHHHHHHhccccc------eEEEEeCCCCCCCC
Confidence                 677888899999888899999999   9999999754447789999988876433      37888889999999


Q ss_pred             cCC---hhHHHHHHHHhCCEEEeecccccccccCccchhh--hcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhh
Q 037144          249 VDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF--IDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLS  322 (502)
Q Consensus       249 idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~  322 (502)
                      +-+   +++|+++|++||+|+++|.+|+.+..........  +.+......+..++.|.++.| ..+|+++. ++.... 
T Consensus       182 ~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~i~-~~~l~~-  259 (385)
T PRK09276        182 VADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVG-NADLIA-  259 (385)
T ss_pred             CCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCcchhheeeeC-CHHHHH-
Confidence            966   6888899999999999999997654321111111  111112235567799998644 45787764 343322 


Q ss_pred             hhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 037144          323 TLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSDKRFE  400 (502)
Q Consensus       323 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~~~~  400 (502)
                      .+.....++..                       ....+...++...+  ....+++..+++.++++++.+.|++. +++
T Consensus       260 ~~~~~~~~~~~-----------------------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~  315 (385)
T PRK09276        260 GLGKVKSNVDS-----------------------GVFQAIQEAGIAALNGPQEVVEELRKIYQERRDILVEGLRKL-GLE  315 (385)
T ss_pred             HHHHHHhhccC-----------------------CCCHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCc
Confidence            22111111100                       00112222233333  34556777788888899999999987 787


Q ss_pred             EecCCCeeEE-EEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh-cCcEEEEeeeEC--CEEEEEE
Q 037144          401 VAFPRNFSLV-CFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV-SGKVFMTHAIVG--GIYVLRF  476 (502)
Q Consensus       401 l~~~~~~~~v-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--g~~~lR~  476 (502)
                      +. ++..+++ ++++++ ..                           ...++.+++.+ .|..+.++..+.  +..++|+
T Consensus       316 ~~-~~~~~~~~~v~~~~-~~---------------------------~~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ri  366 (385)
T PRK09276        316 VE-PPKATFYVWAPVPK-GY---------------------------TSAEFATLLLDKAGVVVTPGNGFGEYGEGYFRI  366 (385)
T ss_pred             cc-CCCcceEEEEECCC-CC---------------------------CHHHHHHHHHHhCCEEECCchhhCCCCCCeEEE
Confidence            65 4444553 444332 11                           02355666654 576544443333  2469999


Q ss_pred             EecCCCCcHHHHHHHHHHHHH
Q 037144          477 AAGNSMTMESHVRAAWTVVQE  497 (502)
Q Consensus       477 ~~~~~~t~~~di~~~~~~l~~  497 (502)
                      +++   .+++++..+++.|.+
T Consensus       367 s~~---~~~~~l~~~l~~l~~  384 (385)
T PRK09276        367 ALT---VPDERIEEAVERIKK  384 (385)
T ss_pred             EeC---CCHHHHHHHHHHHhh
Confidence            986   256688888877754

>PRK06836 aspartate aminotransferase; Provisional

Probab=99.83  E-value=1.4e-17  Score=170.77  Aligned_cols=333  Identities=12%  Similarity=0.043  Sum_probs=208.3

Q ss_pred             HHHHHHHHHHhhcCCC---CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHH
Q 037144           89 VAGIVGEMLSSGFNVV---GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVL  165 (502)
Q Consensus        89 ~~~~~~~~l~~~~n~~---~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~  165 (502)
                      +|..+.+.+...++..   ...|....+...+.+.+.+++...++..-..     ...++|+|+++++..++.....   
T Consensus        47 ~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~-----~~i~~t~G~~~al~~~~~~l~~---  118 (394)
T PRK06836         47 PPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTA-----DHIVMTCGAAGALNVALKAILN---  118 (394)
T ss_pred             CCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCc-----CcEEEeCChHHHHHHHHHHhcC---
Confidence            3455666665555322   3446555677888888889988876652211     2588999999988766655432   


Q ss_pred             HHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcc
Q 037144          166 KKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTA  245 (502)
Q Consensus       166 ~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~  245 (502)
                              +++.|+++..++..+...++..|+   +++.+|++++ ++.+|+++|++++++++      .+|+++.++|+
T Consensus       119 --------~gd~Vli~~p~~~~~~~~~~~~g~---~v~~v~~~~~-~~~~d~~~l~~~~~~~~------~~v~~~~p~NP  180 (394)
T PRK06836        119 --------PGDEVIVFAPYFVEYRFYVDNHGG---KLVVVPTDTD-TFQPDLDALEAAITPKT------KAVIINSPNNP  180 (394)
T ss_pred             --------CCCEEEEcCCCCccHHHHHHHcCC---EEEEEecCCc-cCcCCHHHHHhhcCcCc------eEEEEeCCCCC
Confidence                    567888898899888888899999   9999999764 47899999999996543      37778889999


Q ss_pred             ccccCC---hhHHHHHHHH------hCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCC-CCcceEEEee
Q 037144          246 ITAVDP---LKPLCDVAKQ------FGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFT-TLDCCCLWVK  315 (502)
Q Consensus       246 ~G~idp---l~eI~~i~~~------~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~-p~~~g~~~~r  315 (502)
                      +|.+-|   +++|+++|++      ||+++++|.+|................. .-..+..+++|.++. ...+|+++..
T Consensus       181 tG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~i~~~S~SK~~~~pGlRiG~~~~~  259 (394)
T PRK06836        181 TGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFKYY-DNSIVVYSFSKSLSLPGERIGYIAVN  259 (394)
T ss_pred             CCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHHcc-CcEEEEecchhhccCcceeeEEEecC
Confidence            999966   6677777888      8999999999976543211111111111 123566779999974 4568888775


Q ss_pred             CchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc
Q 037144          316 DPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTS  395 (502)
Q Consensus       316 ~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~  395 (502)
                      +.......+...-.......                  +.-....+......+.+.. +.  ..+++.+.++.+.+.|++
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~q~~~~~~l~~-~~--~~~~~~~~r~~l~~~L~~  318 (394)
T PRK06836        260 PEMEDADDLVAALVFANRIL------------------GFVNAPALMQRVVAKCLDA-TV--DVSIYKRNRDLLYDGLTE  318 (394)
T ss_pred             HHHhhhHHHHHHHHHHhhcc------------------ccccCCHHHHHHHHHHhCC-hH--HHHHHHHHHHHHHHHHHh
Confidence            33110000000000000000                  0000012222222333322 11  234566677888888888


Q ss_pred             CCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEE
Q 037144          396 DKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLR  475 (502)
Q Consensus       396 ~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR  475 (502)
                      . |+++. ++..+++.|...+..                          +  ..++.+.+.+.|..+.++..+...+++|
T Consensus       319 ~-g~~~~-~~~gg~~~~~~~~~~--------------------------~--~~~~~~~l~~~gv~v~~g~~f~~~~~iR  368 (394)
T PRK06836        319 L-GFECV-KPQGAFYLFPKSPEE--------------------------D--DVAFCEKAKKHNLLLVPGSGFGCPGYFR  368 (394)
T ss_pred             C-CCEee-cCCceEEEEEeCCCC--------------------------C--HHHHHHHHHhCCEEEECchhcCCCCeEE
Confidence            7 77766 455455554332221                          0  2345566667787665554454457899


Q ss_pred             EEecCCCCcHHHHHHHHHHHHHHHHhC
Q 037144          476 FAAGNSMTMESHVRAAWTVVQEHLEAF  502 (502)
Q Consensus       476 ~~~~~~~t~~~di~~~~~~l~~~~~~~  502 (502)
                      ++++   .++++++..++.|+++.++|
T Consensus       369 i~~~---~~~~~~~~~i~~l~~~l~~~  392 (394)
T PRK06836        369 LSYC---VDTETIERSLPAFEKLAKEY  392 (394)
T ss_pred             EEec---CCHHHHHHHHHHHHHHHHHh
Confidence            9996   25779999999999887754

>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]

Probab=99.83  E-value=1.2e-17  Score=159.04  Aligned_cols=375  Identities=13%  Similarity=0.119  Sum_probs=248.7

Q ss_pred             CCHHHHHHHHHHhhcCCCC------CCCCCcccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHH
Q 037144           54 ESVETILQDVQEHIVPGIT------HWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQ  127 (502)
Q Consensus        54 ~~~~~il~~~~~~~~~~~~------~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~  127 (502)
                      .++..++..+.....++..      ....|.-|+-+.+.......+.+.+.+..   ..+|..+.+...-.+++++.+.+
T Consensus        42 ~tir~i~~~l~~~~~p~~~k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk---~N~Yaps~G~~~AR~AVAeYl~~  118 (447)
T KOG0259|consen   42 VTIRGILSALFDCCDPEKKKPILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGK---GNGYAPSVGILPARRAVAEYLNR  118 (447)
T ss_pred             ccHHHHHHHHhhcCCcccCceeccCCCCCCCccccccCCHHHHHHHHHHHhcCC---CCCcCCccccHHHHHHHHHHhhc
Confidence            3455666666554433331      12346666666655554444555554433   44577777777777787777555


Q ss_pred             hcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEec
Q 037144          128 MLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKT  207 (502)
Q Consensus       128 l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~  207 (502)
                      -+...-.     ..++++|+|+++|+-+++.+.-+           ++..|+++.++++-+.--|...|+   +|+.++.
T Consensus       119 ~l~~kl~-----a~DV~ltsGC~qAIe~~i~~LA~-----------p~aNILlPrPGfp~Y~~~a~~~~l---EVR~ydl  179 (447)
T KOG0259|consen  119 DLPNKLT-----ADDVVLTSGCSQAIELAISSLAN-----------PGANILLPRPGFPLYDTRAIYSGL---EVRYYDL  179 (447)
T ss_pred             CCCCccC-----cCceEEeccchHHHHHHHHHhcC-----------CCCceecCCCCCchHHHhhhhcCc---eeEeecc
Confidence            4433211     23799999999999888776543           777899999888777778899999   9999999


Q ss_pred             CCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc---CChhHHHHHHHHhCCEEEeecccccccccCccchh
Q 037144          208 TKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRH  284 (502)
Q Consensus       208 ~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~  284 (502)
                      -++.+|++|++.+|.++++++.      ++++..++|++|.+   +-|++|+++|+|+|+.++.|..|+-..+....+-.
T Consensus       180 LPe~~weIDL~~veal~DENT~------AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvp  253 (447)
T KOG0259|consen  180 LPEKDWEIDLDGVEALADENTV------AIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVP  253 (447)
T ss_pred             cCcccceechHHHHHhhccCee------EEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccc
Confidence            8777899999999999998874      78888999999998   77999999999999999999999877665433322


Q ss_pred             hhcCCCCCCeeEEc-cCCcCC-CCCcceEEEeeCchhh-hhhh--cCCcccccCccCCCCCcccccCCCcccccCCCCCC
Q 037144          285 FIDGVECVDSFSFN-PHKWLF-TTLDCCCLWVKDPSCL-LSTL--STNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFR  359 (502)
Q Consensus       285 ~~~~~~~aDsi~~~-~hK~l~-~p~~~g~~~~r~~~~l-~~~~--~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~  359 (502)
                      .-.-.+.+-.+|++ ..|-.. ..+..|++.+.|+.-. ++.-  .....++..                 +.   .+..
T Consensus       254 mg~fssiVPVitlggisKrW~VPGWRlGWi~~hD~~gvf~~~~~~q~~~~~~~~-----------------~~---~p~T  313 (447)
T KOG0259|consen  254 MGKFSSIVPVITLGGISKRWIVPGWRLGWIALHDPRGVFRDTKVVQGIKNFLDI-----------------IP---GPAT  313 (447)
T ss_pred             hhhccccCceEeecccccccccCCceeeeEEEecccccccchHHHHHHHHHHhc-----------------cC---CccH
Confidence            21112245567766 566554 4477899998776321 1100  000011110                 00   0000


Q ss_pred             c--hHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccc
Q 037144          360 S--LKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQ  437 (502)
Q Consensus       360 a--l~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~  437 (502)
                      .  -++=..|..-.++-+...+.-...+++...+.|+++|++.+...|+..+..+.-...+.-                 
T Consensus       314 iiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~IP~l~cp~kPeg~mylmv~l~~s~~-----------------  376 (447)
T KOG0259|consen  314 IIQGALPDILEKTPEEFFDKKLSFLKSNADLCYSRLKDIPCLTCPVKPEGCMYLMVKLNLSLF-----------------  376 (447)
T ss_pred             hHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHHHHhcCCCcccCcCCCcceEEEeccchhhh-----------------
Confidence            0  111223333356778888888999999999999999999987788877665543221100                 


Q ss_pred             cchhHhhHHHHHHHHHHHHhcCc-EEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          438 FSEEERTNEFNRELLESINVSGK-VFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       438 ~~~~~~~~~~~~~l~~~l~~~g~-~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                       .+.+  +  ...++.+|.++-. +++++..++-..|+|++++   ..++.+++++++|++...+
T Consensus       377 -~~~~--d--D~dFc~kL~~Eesv~~LPG~af~~~nw~Ri~i~---~~~~~leea~~Rik~Fc~R  433 (447)
T KOG0259|consen  377 -PDIE--D--DVDFCQKLAREESVICLPGQAFGLKNWLRIVIT---VEEEMLEEAFSRIKEFCDR  433 (447)
T ss_pred             -cccc--c--cHHHHHHHhhhcceEEeccccccCCCeEEEEEc---cChHHHHHHHHHHHHHHHh
Confidence             0001  1  1245555555444 4556666777899999987   4677999999999987654

>PLN02450 1-aminocyclopropane-1-carboxylate synthase

Probab=99.83  E-value=7.3e-18  Score=175.76  Aligned_cols=325  Identities=12%  Similarity=0.110  Sum_probs=209.6

Q ss_pred             cccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh
Q 037144          108 WISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA  187 (502)
Q Consensus       108 ~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s  187 (502)
                      |....+..++.+.+++|+.+.+|.+...   .....++|+|+++++...+.+..+           +++.|+++.+.+..
T Consensus        82 Y~~~~G~~~LR~aiA~~l~~~~~~~~~v---~~~~Iiit~Ga~~al~~l~~~l~~-----------pGd~Vlv~~P~Y~~  147 (468)
T PLN02450         82 FQDYHGLPAFKNALAEFMSEIRGNKVTF---DPNKLVLTAGATSANETLMFCLAE-----------PGDAFLLPTPYYPG  147 (468)
T ss_pred             CCCCCChHHHHHHHHHHHHHhhCCCCCc---ChHHeEEccChHHHHHHHHHHhCC-----------CCCEEEECCCCCCc
Confidence            4444466789999999999887743110   012588999999987666665543           67889999989888


Q ss_pred             HHHHHH-HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hhHHHHHHHHhC
Q 037144          188 FQKAAQ-IVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LKPLCDVAKQFG  263 (502)
Q Consensus       188 ~~~aa~-~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~eI~~i~~~~g  263 (502)
                      +...+. ..|+   +++.||+++++++.+|+++|++++++..+++.++.+|+++.++|+||.+-+   +++|.++|++||
T Consensus       148 ~~~~~~~~~g~---~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~  224 (468)
T PLN02450        148 FDRDLKWRTGV---EIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKN  224 (468)
T ss_pred             hHHHHhhcCCc---EEEEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCC
Confidence            888777 5898   999999875456889999999999876555656777888899999999854   667888899999


Q ss_pred             CEEEeecccccccccCccchhhhc--------CCCCCC--eeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCccccc
Q 037144          264 IWVHVDAAYAGSACICPEFRHFID--------GVECVD--SFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLK  332 (502)
Q Consensus       264 ~~lhVDaA~g~~~~~~~~~~~~~~--------~~~~aD--si~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~  332 (502)
                      +|+++|.+|+...+..+.+...+.        +....+  .+..++.|.++ ....+|+++..+.... ..+.....|. 
T Consensus       225 ~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~~l~-~~~~~~~~~~-  302 (468)
T PLN02450        225 IHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSNDEMVV-SAATKMSSFG-  302 (468)
T ss_pred             cEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCCCccEEEEEECCHHHH-HHHHHHhhcC-
Confidence            999999999875443222211111        000111  45667999996 6677888877544322 2221111110 


Q ss_pred             CccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcH-----HHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCe
Q 037144          333 NEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGV-----ANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNF  407 (502)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~-----~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~  407 (502)
                      .                        ...+...++...+..     ..+++..+++.+.++.+.+.|++. ++.+. ++..
T Consensus       303 ~------------------------~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~-gi~~~-~~~~  356 (468)
T PLN02450        303 L------------------------VSSQTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAA-GIKCL-KSNA  356 (468)
T ss_pred             C------------------------CCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHc-CCccc-CCCc
Confidence            0                        012222333333322     245667788888889999999887 77765 5666


Q ss_pred             eEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh-cCcEEEEeeeEC--CEEEEEEEecCCCCc
Q 037144          408 SLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV-SGKVFMTHAIVG--GIYVLRFAAGNSMTM  484 (502)
Q Consensus       408 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--g~~~lR~~~~~~~t~  484 (502)
                      +++.|.-.+....                   . .. -....++.+++.+ .|..+.++..+.  +.+++|+++++  .+
T Consensus       357 g~flwi~l~~~~~-------------------~-~~-~~~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f~~--~~  413 (468)
T PLN02450        357 GLFCWVDMRHLLK-------------------S-NT-FEAEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVCFAN--MS  413 (468)
T ss_pred             eEEEEEEchHhcC-------------------c-CC-chHHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEEecC--CC
Confidence            6554433221110                   0 00 0111345566654 466544443333  35799999975  25


Q ss_pred             HHHHHHHHHHHHHHHH
Q 037144          485 ESHVRAAWTVVQEHLE  500 (502)
Q Consensus       485 ~~di~~~~~~l~~~~~  500 (502)
                      ++++++.++.|+++.+
T Consensus       414 ~~~l~~~l~ri~~~l~  429 (468)
T PLN02450        414 EETLDLAMKRLKSFVE  429 (468)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            6789999999988764

>PRK06855 aminotransferase; Validated

Probab=99.83  E-value=6.8e-18  Score=174.79  Aligned_cols=359  Identities=9%  Similarity=0.046  Sum_probs=213.8

Q ss_pred             CHHHHHHHHHHhhc-CCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHH
Q 037144           88 SVAGIVGEMLSSGF-NVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLK  166 (502)
Q Consensus        88 ~~~~~~~~~l~~~~-n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~  166 (502)
                      .+|..+.+.+...+ +.....|....+..++.+.+.+|+.+..|++-..     ...++|+|+++++..++. ..+    
T Consensus        48 ~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~-----~~I~it~G~~~al~~~~~-l~~----  117 (433)
T PRK06855         48 KIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITP-----DDIIFFNGLGDAIAKIYG-LLR----  117 (433)
T ss_pred             CCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCH-----hHEEEcCcHHHHHHHHHH-hcC----
Confidence            44555666555544 2333457666778899999999999988864321     268899999998866542 222    


Q ss_pred             HhCccCCCCeEEEeCCCCchhHHHHH-HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcc
Q 037144          167 KIGRENISKLVVYSSDQTHCAFQKAA-QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTA  245 (502)
Q Consensus       167 ~~~~~~~~~~~v~~s~~~H~s~~~aa-~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~  245 (502)
                             +++.|++.+++++.+..+. ...|+   +++.+|+++++++.+|+++|+++++...    .+.+++++.++|+
T Consensus       118 -------~Gd~Vlv~~P~Y~~~~~~~~~~~g~---~~v~v~~~~~~~~~~d~~~l~~~~~~~~----~~~~i~l~~P~NP  183 (433)
T PRK06855        118 -------REARVIGPSPAYSTHSSAEAAHAGY---PPVTYRLDPENNWYPDLDDLENKVKYNP----SIAGILLINPDNP  183 (433)
T ss_pred             -------CCCeEEEeCCCCchHHHHHHHhcCC---eEEEEecccccCCCCCHHHHHHHHhcCC----CceEEEEECCCCC
Confidence                   6778888888887755442 34577   8899998764457899999999986321    1236777789999


Q ss_pred             ccccCC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCC-eeEEccCCcCC-CCCcceEEEeeCc---
Q 037144          246 ITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVD-SFSFNPHKWLF-TTLDCCCLWVKDP---  317 (502)
Q Consensus       246 ~G~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aD-si~~~~hK~l~-~p~~~g~~~~r~~---  317 (502)
                      ||.+-+   +++|+++|++||+|+++|.+|+...+..........-...-. .+..++.|.++ ....+|+++..+.   
T Consensus       184 TG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~~  263 (433)
T PRK06855        184 TGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRCGWIEVYNADKD  263 (433)
T ss_pred             CCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceEEEEEEeCCchh
Confidence            999955   677888899999999999999876542211111111011112 45567999996 6677898887321   


Q ss_pred             hhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--c--HHHHHHHHHHHHHHHHHHHHHH
Q 037144          318 SCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--G--VANLRNFIRSHVGMAKLFERLV  393 (502)
Q Consensus       318 ~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g--~~g~~~~~~~~~~la~~l~~~l  393 (502)
                      ..+...+.....+....                 . +   ...+...++.+.+  +  .+.+++..+.+.++++.+.+.|
T Consensus       264 ~~~~~~~~~~~~~~~~~-----------------~-~---~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L  322 (433)
T PRK06855        264 EVFKKYINSILNAKMIE-----------------V-C---STTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKL  322 (433)
T ss_pred             hHHHHHHHHHHHhhccc-----------------c-C---CChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence            11111111000000000                 0 0   0223333444444  2  3456777788888899999999


Q ss_pred             hcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHH-------HHHHHHHH-HHhcCcEEEEe
Q 037144          394 TSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNE-------FNRELLES-INVSGKVFMTH  465 (502)
Q Consensus       394 ~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~-l~~~g~~~~~~  465 (502)
                      ++++++.+. +|+.+++.|.-.+......     ..+....+  ....+...+       ...++... +.+.|..++++
T Consensus       323 ~~~~~~~~~-~p~gg~~~w~~l~~~~~~~-----~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG  394 (433)
T PRK06855        323 KDVPGLKVN-RTNGAFYMTVVFEDGVLNN-----KQSLPIEN--PEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPL  394 (433)
T ss_pred             hcCCCeecc-CCCeeEEEeeccccccccc-----cccCCcch--hhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecC
Confidence            888787754 6666666654433211000     00000000  000000000       02234433 44557666655


Q ss_pred             eeEC-CEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          466 AIVG-GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       466 ~~~~-g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      ..+. ....+|+|+++  .++++|+..++.|.+++++
T Consensus       395 ~~F~~~~~~~Rls~~~--~~~~~i~~~~~~l~~~~~~  429 (433)
T PRK06855        395 SSFCTELNGFRVTLLE--RDEEKFEWIYQTLAEKIEE  429 (433)
T ss_pred             CcCCCCCCceEEEECC--CcHHHHHHHHHHHHHHHHH
Confidence            5552 22359999975  3577999999999988764

>PRK07366 succinyldiaminopimelate transaminase; Validated

Probab=99.82  E-value=5e-18  Score=173.76  Aligned_cols=329  Identities=10%  Similarity=0.009  Sum_probs=207.4

Q ss_pred             HHHHHHHHHhhcC-CCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCC-cEEEcCCchHHHHHHHHHHHHHHHHH
Q 037144           90 AGIVGEMLSSGFN-VVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNG-GGVIQGTTCEALLCTLTAARDRVLKK  167 (502)
Q Consensus        90 ~~~~~~~l~~~~n-~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~-~g~~t~ggt~a~~~al~~a~~~~~~~  167 (502)
                      +..+.+.+...+. .....|...++..++.+.+.+|+.+..|.+-+.     . ..++|+|+++++..++.+..+     
T Consensus        45 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~-----~~~I~it~Gs~~al~~~~~~l~~-----  114 (388)
T PRK07366         45 PAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDP-----ETEVLPLIGSQEGTAHLPLAVLN-----  114 (388)
T ss_pred             CHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCC-----cCeEEECCCcHHHHHHHHHHhCC-----
Confidence            3445555555443 223456666677889999999999888864221     1 378889999988766655433     


Q ss_pred             hCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccc
Q 037144          168 IGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAIT  247 (502)
Q Consensus       168 ~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G  247 (502)
                            +++.|++..+++..+...++..|+   +++.+|++.++.+.+|++++++.+.+.      +.+|+++.++|+||
T Consensus       115 ------~gd~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~~~~~------~k~i~l~~p~NPTG  179 (388)
T PRK07366        115 ------PGDFALLLDPGYPSHAGGVYLAGG---QIYPMPLRAENDFLPVFADIPTEVLAQ------ARLMVLSYPHNPTT  179 (388)
T ss_pred             ------CCCEEEEcCCCCcchHHHHHhcCC---EEEEEECCCccCCCCCHHHHHHhhccc------ceEEEEeCCCCCCC
Confidence                  677888899999999999999999   999999986555788999998776543      23677788999999


Q ss_pred             ccC---ChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCC-CC--eeEEccCCcCC-CCCcceEEEeeCchhh
Q 037144          248 AVD---PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEC-VD--SFSFNPHKWLF-TTLDCCCLWVKDPSCL  320 (502)
Q Consensus       248 ~id---pl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~-aD--si~~~~hK~l~-~p~~~g~~~~r~~~~l  320 (502)
                      .+-   .+++|+++|++||+|+++|.+|+-..+........+..+.. -+  .++.++.|.++ ....+|+++. ++..+
T Consensus       180 ~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~-~~~li  258 (388)
T PRK07366        180 AIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIG-NAQLI  258 (388)
T ss_pred             ccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcchhheehcC-CHHHH
Confidence            994   46677889999999999999997665421110111111111 12  34568999996 5566777764 44333


Q ss_pred             hhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 037144          321 LSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSDKR  398 (502)
Q Consensus       321 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~~  398 (502)
                      . .+.....+...                     + . .+.....++..+  ..+.+++..+.+.+.++++.+.|++. +
T Consensus       259 ~-~l~~~~~~~~~---------------------~-~-~~~~~~~a~~~l~~~~~~l~~~~~~~~~~r~~l~~~L~~~-~  313 (388)
T PRK07366        259 Q-ALRQVKAVVDF---------------------N-Q-YRGILNGAIAALTGPQATVQQTVQIFRQRRDAFINALHQI-G  313 (388)
T ss_pred             H-HHHHHHhhccc---------------------C-C-CHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-C
Confidence            2 22111111000                     0 0 011111222222  24567788888889999999999887 6


Q ss_pred             eEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeEC--CEEEEE
Q 037144          399 FEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVG--GIYVLR  475 (502)
Q Consensus       399 ~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lR  475 (502)
                      +....+.....+++.+++. .                         +....++.+.+. +.|..+.++..+.  +..++|
T Consensus       314 ~~~~~p~~g~f~~~~~~~~-~-------------------------~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iR  367 (388)
T PRK07366        314 WPVPLPEATMYVWAKLPEP-W-------------------------QGNSVEFCTQLVAQTGVAASPGSGFGKSGEGYVR  367 (388)
T ss_pred             CcccCCCeeEEEEEECCcc-c-------------------------CCCHHHHHHHHHHhCCEEEeCchHhCcCCCCeEE
Confidence            7654333333444444321 0                         000234555554 4576555544443  247999


Q ss_pred             EEecCCCCcHHHHHHHHHHHHHH
Q 037144          476 FAAGNSMTMESHVRAAWTVVQEH  498 (502)
Q Consensus       476 ~~~~~~~t~~~di~~~~~~l~~~  498 (502)
                      ++++.   +.++++++++.|.+.
T Consensus       368 i~~~~---~~~~l~~~l~rl~~~  387 (388)
T PRK07366        368 FALVH---DPDILEEAVERIAAF  387 (388)
T ss_pred             EEecC---CHHHHHHHHHHHHHh
Confidence            99873   467899999888764

>PRK09147 succinyldiaminopimelate transaminase; Provisional

Probab=99.82  E-value=9.6e-18  Score=172.11  Aligned_cols=326  Identities=11%  Similarity=0.092  Sum_probs=205.8

Q ss_pred             HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCC-CccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHh
Q 037144           90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLP-KSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKI  168 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~-~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~  168 (502)
                      +..+.+.+...++ ....|....+..++.+.+.+|+.+.+|++ -+.    ....++|+|+++++..++.+..+      
T Consensus        44 ~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~----~~~i~it~G~~~al~~~~~~l~~------  112 (396)
T PRK09147         44 PAFIKDALAANLD-GLASYPTTAGLPALREAIAAWLERRYGLPALDP----ATQVLPVNGSREALFAFAQTVID------  112 (396)
T ss_pred             CHHHHHHHHHHhh-hhcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCc----cceEEECCChHHHHHHHHHHHcC------
Confidence            4456666655554 33456666667889999999999988864 110    01478899999888766665433      


Q ss_pred             CccCCC---CeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcc
Q 037144          169 GRENIS---KLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTA  245 (502)
Q Consensus       169 ~~~~~~---~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~  245 (502)
                           +   ++.|+++.+.+..+..+++.+|+   +++.||+++++++.+|+++|++.+.+++      .+|+++.++|+
T Consensus       113 -----~~~~gd~vlv~~P~y~~~~~~~~~~g~---~~~~vp~~~~~~~~~d~~~l~~~~~~~~------k~i~l~nP~NP  178 (396)
T PRK09147        113 -----RDGPGPLVVCPNPFYQIYEGAALLAGA---EPYFLNCDPANNFAPDFDAVPAEVWART------QLLFVCSPGNP  178 (396)
T ss_pred             -----CCCCCCEEEEcCCCccchHHHHHhcCC---EEEEeccCccccCccCHHHHHHHHhhcc------EEEEEcCCCCC
Confidence                 4   67888898899888899999999   9999999765557899999998876433      36777899999


Q ss_pred             ccccC---ChhHHHHHHHHhCCEEEeecccccccccCc--cchhh--hcCC--CCCC--eeEEccCCcC-CCCCcceEEE
Q 037144          246 ITAVD---PLKPLCDVAKQFGIWVHVDAAYAGSACICP--EFRHF--IDGV--ECVD--SFSFNPHKWL-FTTLDCCCLW  313 (502)
Q Consensus       246 ~G~id---pl~eI~~i~~~~g~~lhVDaA~g~~~~~~~--~~~~~--~~~~--~~aD--si~~~~hK~l-~~p~~~g~~~  313 (502)
                      ||.+-   .+++|+++|++|++|+++|.+|+...+..+  .....  ...+  ...|  .+..++.|.+ .....+|+++
T Consensus       179 TG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~  258 (396)
T PRK09147        179 TGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPGLRSGFVA  258 (396)
T ss_pred             cCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccccccCCccceeeeec
Confidence            99984   577888899999999999999977543221  10000  0001  0112  5567799965 4557778876


Q ss_pred             eeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHH
Q 037144          314 VKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF-GVANLRNFIRSHVGMAKLFERL  392 (502)
Q Consensus       314 ~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~la~~l~~~  392 (502)
                      .. +..+. .+.....+...                       ....+...+++..+ ..+.+.+..+.+.+.++.+.+.
T Consensus       259 ~~-~~l~~-~~~~~~~~~~~-----------------------~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (396)
T PRK09147        259 GD-AALLK-KFLLYRTYHGC-----------------------AMPPAVQAASIAAWNDEAHVRENRALYREKFDAVTPI  313 (396)
T ss_pred             CC-HHHHH-HHHHHhhhccc-----------------------CCCHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHH
Confidence            53 33332 22111111100                       00122223333333 2345666777778888888888


Q ss_pred             HhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeEC--
Q 037144          393 VTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVG--  469 (502)
Q Consensus       393 l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--  469 (502)
                      |++.  +.+. .|..+.+.|.-.+..                             ..++.+++. +.|..+.++..+.  
T Consensus       314 L~~~--~~~~-~p~~g~f~~~~~~~~-----------------------------~~~~~~~ll~~~gv~v~pg~~f~~~  361 (396)
T PRK09147        314 LAPV--LDVQ-LPDAGFYLWAKVPGD-----------------------------DTEFARRLYADYNVTVLPGSYLARE  361 (396)
T ss_pred             HHHh--cCCC-CCCeeEEEEEECCCC-----------------------------HHHHHHHHHHhCCEEEeCCcccccc
Confidence            8764  4443 344444443322211                             134556654 4576554443331  


Q ss_pred             ------CEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144          470 ------GIYVLRFAAGNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       470 ------g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~  500 (502)
                            +..++|++++.   ++++++++++.|.++.+
T Consensus       362 ~~~~~~~~~~iRi~~~~---~~~~l~~~l~rl~~~~~  395 (396)
T PRK09147        362 AHGVNPGAGRVRIALVA---PLAECVEAAERIVDFCR  395 (396)
T ss_pred             ccCCCCCCCeEEEEecC---CHHHHHHHHHHHHHHhc
Confidence                  24689999874   46689999999987653

>PRK08636 aspartate aminotransferase; Provisional

Probab=99.82  E-value=1.9e-17  Score=170.27  Aligned_cols=339  Identities=13%  Similarity=0.102  Sum_probs=211.7

Q ss_pred             HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCC-cEEEcCCchHHHHHHHHHHHHHHHHHh
Q 037144           90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNG-GGVIQGTTCEALLCTLTAARDRVLKKI  168 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~-~g~~t~ggt~a~~~al~~a~~~~~~~~  168 (502)
                      +..+..+.....+.....|....+...+.+.+++|+.+.+|.+-..     . ..++|+|+++++..++.+..+      
T Consensus        49 ~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~-----~~~I~it~G~~~al~~~~~~l~~------  117 (403)
T PRK08636         49 QHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDP-----ETEVVATMGSKEGYVHLVQAITN------  117 (403)
T ss_pred             HHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC-----CCeEEECCChHHHHHHHHHHhCC------
Confidence            3344444433333234556666677889999999999998864321     1 488999999988777665543      


Q ss_pred             CccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhc-CCccEEEEEecCCcccc
Q 037144          169 GRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEA-ELIPLFLCATVGTTAIT  247 (502)
Q Consensus       169 ~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~-g~~p~~Vv~t~gtt~~G  247 (502)
                           +++.|++.++++..+...++..|+   +++.||++.++++.+|++.|.+.+++..++ ..++.+|+.+.++|+||
T Consensus       118 -----~gd~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG  189 (403)
T PRK08636        118 -----PGDVAIVPDPAYPIHSQAFILAGG---NVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVNFPHNPTT  189 (403)
T ss_pred             -----CCCEEEEcCCCCcchHHHHHhcCC---EEEEEeccccccCccChhhhhhHHHHHHhhccCCceEEEEeCCCCCCC
Confidence                 678899999999999999999999   999999864445789998776665544332 22456888888999999


Q ss_pred             ccCC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCC-C--eeEEccCCcCC-CCCcceEEEeeCchhh
Q 037144          248 AVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECV-D--SFSFNPHKWLF-TTLDCCCLWVKDPSCL  320 (502)
Q Consensus       248 ~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~a-D--si~~~~hK~l~-~p~~~g~~~~r~~~~l  320 (502)
                      .+-+   +++|+++|++|++|+++|.+|+...+...... .+..+... |  ..+.++.|.++ ....+|+++. ++...
T Consensus       190 ~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~-~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~iv~-~~~li  267 (403)
T PRK08636        190 ATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTP-SILEVEGAKDVAVESYTLSKSYNMAGWRVGFVVG-NKKLV  267 (403)
T ss_pred             ccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCC-ChhcCCCccccEEEEEecccccCCccceeeeeeC-CHHHH
Confidence            9944   67888899999999999999976543211111 11122221 2  23567999995 5567788764 44332


Q ss_pred             hhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 037144          321 LSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFE  400 (502)
Q Consensus       321 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~  400 (502)
                      . .+.....+....                   .+.. ....+..++.. ..+.++++.+.+.++++.+.+.|++. ++.
T Consensus       268 ~-~~~~~~~~~~~~-------------------~~~~-~q~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~  324 (403)
T PRK08636        268 G-ALKKIKSWLDYG-------------------MFTP-IQVAATIALDG-DQSCVEEIRETYRKRRDVLIESFANA-GWE  324 (403)
T ss_pred             H-HHHHHHHHhccc-------------------CChH-HHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHC-CCc
Confidence            2 222111111000                   0000 01111112221 24556777778888889999999886 676


Q ss_pred             EecCCCee-EEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeEC--CEEEEEE
Q 037144          401 VAFPRNFS-LVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVG--GIYVLRF  476 (502)
Q Consensus       401 l~~~~~~~-~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lR~  476 (502)
                      +. +|..+ .+++++++. ..                    ..  +  ..++.+++. +.|..+.++..+.  +..++|+
T Consensus       325 ~~-~p~~g~~~~~~l~~~-~~--------------------~~--~--~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi  378 (403)
T PRK08636        325 LQ-KPRASMFVWAKIPEP-AR--------------------HL--G--SLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRI  378 (403)
T ss_pred             cc-CCCcceEEEEECCCc-cC--------------------CC--C--HHHHHHHHHHhCCEEEecchhhCcCCCCeEEE
Confidence            65 44444 444444321 00                    00  0  234555544 3566555444343  2479999


Q ss_pred             EecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          477 AAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       477 ~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      +++   .++++++++++.|+++++.
T Consensus       379 ~~~---~~~~~l~~~~~rl~~~l~~  400 (403)
T PRK08636        379 ALI---ENENRIRQAARNIKKFLKE  400 (403)
T ss_pred             Eec---CCHHHHHHHHHHHHHHHHh
Confidence            986   3567999999999887764

>PRK07683 aminotransferase A; Validated

Probab=99.82  E-value=1.5e-17  Score=170.02  Aligned_cols=328  Identities=12%  Similarity=0.094  Sum_probs=213.4

Q ss_pred             HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144           90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG  169 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~  169 (502)
                      +..+.+.+...+......|...++..++++++.+|+.+.+|.+-+.    ....++|+|+++|+..++.+...       
T Consensus        43 ~~~~~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~----~~~I~~t~G~~~al~~~~~~l~~-------  111 (387)
T PRK07683         43 PSHVKEAAKRAITENYTSYTHNAGLLELRKAACNFVKDKYDLHYSP----ESEIIVTIGASEAIDIAFRTILE-------  111 (387)
T ss_pred             CHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCcEEEeCChHHHHHHHHHHhCC-------
Confidence            3455666666665545566666778899999999998887764221    01589999999998766655432       


Q ss_pred             ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144          170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV  249 (502)
Q Consensus       170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i  249 (502)
                          +++.|+++...+..+..+++.+|+   +++.++.+.+ ++.+|++++++.+++.+      .+|+++.++|+||.+
T Consensus       112 ----~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~-~~~~~~~~l~~~~~~~~------~~i~i~~p~NPtG~~  177 (387)
T PRK07683        112 ----PGTEVILPAPIYPGYEPIIRLCGA---KPVFIDTRST-GFRLTAEALENAITEKT------RCVVLPYPSNPTGVT  177 (387)
T ss_pred             ----CCCEEEEcCCCccchHHHHHHcCC---EEEEeecCcc-cCCCCHHHHHHhcCcCc------eEEEEeCCCCCCCcC
Confidence                567888888888888888999999   9999998753 47889999999886533      367888999999998


Q ss_pred             ---CChhHHHHHHHHhCCEEEeecccccccccCccchhhhc--CCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhh
Q 037144          250 ---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFID--GVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLST  323 (502)
Q Consensus       250 ---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~--~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~  323 (502)
                         +++++|+++|+++|+++++|.+|..+...- .......  +...-..+..++.|.++ ....+|+++.. +.... .
T Consensus       178 ~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~~-~~l~~-~  254 (387)
T PRK07683        178 LSKEELQDIADVLKDKNIFVLSDEIYSELVYEQ-PHTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFAP-SYLAK-H  254 (387)
T ss_pred             CCHHHHHHHHHHHHHcCeEEEEecccccceeCC-CcCChhhccCCcCCeEEEeeccccccCccceeEEEEcC-HHHHH-H
Confidence               458899999999999999999998654321 1111111  11122355677999998 44557777653 33222 2


Q ss_pred             hcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 037144          324 LSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSDKRFEV  401 (502)
Q Consensus       324 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l  401 (502)
                      +.....|...                    +   ...+...++...+  |...+++..+++.++++++.+.|.+. ++.+
T Consensus       255 ~~~~~~~~~~--------------------~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~  310 (387)
T PRK07683        255 ILKVHQYNVT--------------------C---ASSISQYAALEALTAGKDDAKMMRHQYKKRRDYVYNRLISM-GLDV  310 (387)
T ss_pred             HHHHHHhccC--------------------C---CChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHc-CCcc
Confidence            2111111110                    0   0122222222222  44556677778888899999999886 6765


Q ss_pred             ecCCCeeEEEEEeecC-cchhhhhhcccCCCcccccccchhHhhHHHHHHHHHH-HHhcCcEEEEeeeEC--CEEEEEEE
Q 037144          402 AFPRNFSLVCFRVTPS-AVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLES-INVSGKVFMTHAIVG--GIYVLRFA  477 (502)
Q Consensus       402 ~~~~~~~~v~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-l~~~g~~~~~~~~~~--g~~~lR~~  477 (502)
                      . +++.+++.|...+. ..                         +  ..++... +.+.|..+.++..+.  +..++|++
T Consensus       311 ~-~~~~~~~~~~~~~~~~~-------------------------~--~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~  362 (387)
T PRK07683        311 E-KPTGAFYLFPSIGHFTM-------------------------S--SFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLS  362 (387)
T ss_pred             c-CCCeeEEEEEecccCCC-------------------------C--HHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEE
Confidence            4 56666665544331 11                         0  1233433 344576554444332  35799999


Q ss_pred             ecCCCCcHHHHHHHHHHHHHHHH
Q 037144          478 AGNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       478 ~~~~~t~~~di~~~~~~l~~~~~  500 (502)
                      ++.   +++++..+++.|.++.+
T Consensus       363 ~~~---~~~~~~~al~~l~~~l~  382 (387)
T PRK07683        363 YAY---SIETLKEGLDRLEAFLQ  382 (387)
T ss_pred             ecC---CHHHHHHHHHHHHHHHH
Confidence            873   57789999998888654

>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional

Probab=99.82  E-value=5.5e-18  Score=172.40  Aligned_cols=245  Identities=13%  Similarity=0.084  Sum_probs=160.2

Q ss_pred             cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144          110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ  189 (502)
Q Consensus       110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~  189 (502)
                      .+|...++|++    +++++|.+         ..++++|||+|+..++.+..-.          +++.|+++..+|.+..
T Consensus        31 ~g~~~~~le~~----la~~~g~~---------~~v~~~sgt~al~lal~al~~~----------~Gd~Viv~~~~~~~~~   87 (379)
T PRK11658         31 TGPKNQALEQA----FCQLTGNQ---------HAIAVSSATAGMHITLMALGIG----------PGDEVITPSLTWVSTL   87 (379)
T ss_pred             CCHhHHHHHHH----HHHHhCCC---------eEEEECCHHHHHHHHHHHcCCC----------CCCEEEECCCcHHHHH
Confidence            46666777766    56677764         2588899999988777655211          6788999999999999


Q ss_pred             HHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEee
Q 037144          190 KAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVD  269 (502)
Q Consensus       190 ~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVD  269 (502)
                      .++...|+   +++.++++++ ++.+|+++|+++++++++      +|+.+   +.+|...|+++|.++|+++|+++++|
T Consensus        88 ~~~~~~G~---~~v~vd~~~~-~~~~d~~~l~~~i~~~tk------av~~~---~~~G~~~d~~~i~~~a~~~gi~vi~D  154 (379)
T PRK11658         88 NMIVLLGA---TPVMVDVDRD-TLMVTPEAIEAAITPRTK------AIIPV---HYAGAPADLDAIRAIGERYGIPVIED  154 (379)
T ss_pred             HHHHHcCC---EEEEEecCCC-cCCcCHHHHHHhcccCCe------EEEEe---CCCCCcCCHHHHHHHHHHcCCeEEEE
Confidence            99999999   9999999864 468999999999976443      55533   35899999999999999999999999


Q ss_pred             cccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhh--cCCcccccCccCCCCCcccccCC
Q 037144          270 AAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTL--STNPQYLKNEATDQEPKEQEVGY  347 (502)
Q Consensus       270 aA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~--~~~~~yl~~~~~~~~~~~~~~~~  347 (502)
                      +||+.+.......   + +-.+.++++++.+|++.++ ..|+++..+++......  .....+........  ......+
T Consensus       155 ~a~a~g~~~~~~~---~-g~~g~~~~Sf~~~K~l~~g-~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~--~~~~~~~  227 (379)
T PRK11658        155 AAHAVGTYYKGRH---I-GARGTAIFSFHAIKNITCA-EGGLVVTDDDELADRLRSLKFHGLGVDAFDRQT--QGRAPQA  227 (379)
T ss_pred             CCCccCCeECCee---c-CCCCCEEEeCCCCCcCccc-CceEEEECCHHHHHHHHHHHHcCCCcchhhhhc--ccCCCcc
Confidence            9997554332111   1 1124578889999988654 34455555554432221  11000100000000  0000000


Q ss_pred             CcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCe
Q 037144          348 KDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRF  399 (502)
Q Consensus       348 ~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~  399 (502)
                      ..  ...+..++...+-+++.....+++++..++..++++++.+.|++++..
T Consensus       228 ~~--~~~G~n~~~~~l~AAl~~~ql~~l~~~~~~r~~~a~~~~~~L~~~~~~  277 (379)
T PRK11658        228 EV--LTPGYKYNLADINAAIALVQLAKLEALNARRREIAARYLQALADLPFQ  277 (379)
T ss_pred             ee--eccccccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence            00  011212223344456655566889999999999999999999988643

>PRK00950 histidinol-phosphate aminotransferase; Validated

Probab=99.82  E-value=8.2e-18  Score=170.52  Aligned_cols=283  Identities=15%  Similarity=0.142  Sum_probs=178.7

Q ss_pred             HHHHHHHHhcCCCCccCcCCCCcEEE-cCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCC
Q 037144          120 IVMDWLGQMLDLPKSFLFSGNGGGVI-QGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGID  198 (502)
Q Consensus       120 ~~~~~l~~l~g~~~~~~~~~~~~g~~-t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg  198 (502)
                      ++++.+++++|++.+       ..++ ++|+++++..++.+...           +++.|+++...+..+...++..|+ 
T Consensus        73 ~lr~~ia~~~~~~~~-------~i~~~~~Ga~~~i~~~~~~~~~-----------~gd~vlv~~p~y~~~~~~~~~~g~-  133 (361)
T PRK00950         73 ELREALSKYTGVPVE-------NIIVGGDGMDEVIDTLMRTFID-----------PGDEVIIPTPTFSYYEISAKAHGA-  133 (361)
T ss_pred             HHHHHHHHHhCCCHH-------HEEEeCCCHHHHHHHHHHHhcC-----------CCCEEEEcCCChHHHHHHHHHcCC-
Confidence            344556677787654       4677 55656655444433321           567788888777777778899999 


Q ss_pred             CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccccccccc
Q 037144          199 RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACI  278 (502)
Q Consensus       199 ~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~  278 (502)
                        +++.+|.+.  ++.+|+++|++++.+.+      .+|+++.++|++|.+-|+++|.++|+++|+++++|++|+.+.  
T Consensus       134 --~~~~~~~~~--~~~~~~~~l~~~~~~~~------~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~li~De~y~~~~--  201 (361)
T PRK00950        134 --KPVYAKREE--DFSLDVDSVLNAITEKT------KVIFLCTPNNPTGNLIPEEDIRKILESTDALVFVDEAYVEFA--  201 (361)
T ss_pred             --EEEEeecCC--CCCcCHHHHHHHhccCC------CEEEEeCCCCCCCCCcCHHHHHHHHHHCCcEEEEECchhhhC--
Confidence              999999653  56899999999885432      367778999999999999999999999999999999997643  


Q ss_pred             CccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCC
Q 037144          279 CPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRR  357 (502)
Q Consensus       279 ~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~  357 (502)
                      ............. -.+..+++|.++.| ...|+++.. +............+                    .      
T Consensus       202 ~~~~~~~~~~~~~-vi~~~S~SK~~g~~GlRiG~~~~~-~~~~~~~~~~~~~~--------------------~------  253 (361)
T PRK00950        202 EYDYTPLALEYDN-LIIGRTFSKVFGLAGLRIGYGFVP-EWLIDYYMRAKTPF--------------------S------  253 (361)
T ss_pred             ccchHHHHHhcCC-EEEEEeehHhhcCchhhcchhcCC-HHHHHHHHHhcCCC--------------------C------
Confidence            1112222221111 13445789999754 456777653 32222111111000                    0      


Q ss_pred             CCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCccccc
Q 037144          358 FRSLKLWVVIRNFG-VANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYR  436 (502)
Q Consensus       358 ~~al~~~~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~  436 (502)
                      ...+....+...+. .+.+++..++..++++++.+.|.    +++. ++..+++++.+.+..                  
T Consensus       254 ~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~l~----~~~~-~~~~~~i~~~~~~~~------------------  310 (361)
T PRK00950        254 LTRLSQAAAIAALSDKEYIEKSIEHGIKSREYLYNELP----FKVY-PSEANFVLVDVTPMT------------------  310 (361)
T ss_pred             CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhhcC----eeEC-CCcceEEEEECCCCC------------------
Confidence            12233344444442 33456666666667777766654    4443 455566666552211                  


Q ss_pred             ccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC--CEEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144          437 QFSEEERTNEFNRELLESINVSGKVFMTHAIVG--GIYVLRFAAGNSMTMESHVRAAWTVVQEHL  499 (502)
Q Consensus       437 ~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lR~~~~~~~t~~~di~~~~~~l~~~~  499 (502)
                                 ..++.+++.++|..+.++..+.  +..++|++++    +.+++++++++|+++.
T Consensus       311 -----------~~~~~~~l~~~gv~v~~~~~f~~~~~~~lRis~~----~~~~~~~l~~~L~~il  360 (361)
T PRK00950        311 -----------AKEFCEELLKRGVIVRDCTSFRGLGDYYIRVSIG----TFEENERFLEILKEIV  360 (361)
T ss_pred             -----------HHHHHHHHHHCCEEEeeCCccCCCCCCeEEEECC----CHHHHHHHHHHHHHHh
Confidence                       3456777777786544433332  3568999986    4569999999998865

>PRK06358 threonine-phosphate decarboxylase; Provisional

Probab=99.82  E-value=2e-17  Score=167.05  Aligned_cols=286  Identities=11%  Similarity=0.088  Sum_probs=188.7

Q ss_pred             HHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCC
Q 037144          121 VMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRK  200 (502)
Q Consensus       121 ~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~  200 (502)
                      +++.+++.++++.+       ..++|+|+++++..++.+. .           ++ .|++..+.+..+..+++..|+   
T Consensus        59 lr~~ia~~~~~~~~-------~i~it~Ga~~~l~~~~~~~-~-----------~~-~v~i~~P~y~~~~~~~~~~g~---  115 (354)
T PRK06358         59 LRKRIASFEQLDLE-------NVILGNGATELIFNIVKVT-K-----------PK-KVLILAPTFAEYERALKAFDA---  115 (354)
T ss_pred             HHHHHHHHhCCChh-------hEEECCCHHHHHHHHHHHh-C-----------CC-cEEEecCChHHHHHHHHHcCC---
Confidence            33445555577654       6899999998886655432 1           33 466788888889999999999   


Q ss_pred             CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hhHHHHHHHHhCCEEEeecccccccc
Q 037144          201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSAC  277 (502)
Q Consensus       201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~  277 (502)
                      +++.+|++.++++.+| +++.+.+.+.      +.+|+++.++|+||.+-+   +++|.++|++||+|+++|.+|..+..
T Consensus       116 ~~~~~~~~~~~~~~~d-~~~~~~~~~~------~~~v~~~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~  188 (354)
T PRK06358        116 EIEYAELTEETNFAAN-EIVLEEIKEE------IDLVFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLE  188 (354)
T ss_pred             eeEEEeCccccCCCcc-HHHHHhhccC------CCEEEEeCCCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCcccccCC
Confidence            9999999755457889 6665555332      336777899999999965   88888899999999999999976543


Q ss_pred             cCccchhhhcCCCCCC--eeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccC
Q 037144          278 ICPEFRHFIDGVECVD--SFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITL  354 (502)
Q Consensus       278 ~~~~~~~~~~~~~~aD--si~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~  354 (502)
                      ... ....+..+...+  .+..++.|.++ ....+|+++..++............+                        
T Consensus       189 ~~~-~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~~~~~~~~~~~~~~------------------------  243 (354)
T PRK06358        189 ENE-TISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSNKNLAEKLLQMREPW------------------------  243 (354)
T ss_pred             Ccc-chhHHHhccCCCCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhCCCC------------------------
Confidence            211 111111222222  44567999998 66778888765443322111111100                        


Q ss_pred             CCCCCchHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcc
Q 037144          355 CRRFRSLKLWVVIRNFGV-ANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYD  433 (502)
Q Consensus       355 sr~~~al~~~~~l~~~g~-~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~  433 (502)
                        ....+..+++...+.. +.+.+.++...+.++++.+.|++.+++++. ++..+.+++++++                 
T Consensus       244 --~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~~~g~f~~~~~~~-----------------  303 (354)
T PRK06358        244 --SINTFADLAGQTLLDDKEYIKKTIQWIKEEKDFLYNGLSEFKGIKVY-KPSVNFIFFKLEK-----------------  303 (354)
T ss_pred             --cchHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEc-CCcceEEEEEcCc-----------------
Confidence              0123334444444433 345777888888899999999988887765 5566655554432                 


Q ss_pred             cccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC--CEEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144          434 QYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG--GIYVLRFAAGNSMTMESHVRAAWTVVQEHL  499 (502)
Q Consensus       434 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lR~~~~~~~t~~~di~~~~~~l~~~~  499 (502)
                                    ..++.+++.+.|..+..+..+.  +..++|+++.    +.++.++++++|+++.
T Consensus       304 --------------~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRls~~----~~~~~~~l~~~l~~~~  353 (354)
T PRK06358        304 --------------PIDLRKELLKKGILIRSCSNYRGLDENYYRVAVK----SREDNKKLLKALEVIL  353 (354)
T ss_pred             --------------hHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEeC----CHHHHHHHHHHHHHHh
Confidence                          1356777777787665555553  3468999986    5569999999998764

>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]

Probab=99.82  E-value=1.1e-17  Score=165.16  Aligned_cols=336  Identities=15%  Similarity=0.112  Sum_probs=219.4

Q ss_pred             HHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCc
Q 037144           91 GIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGR  170 (502)
Q Consensus        91 ~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~  170 (502)
                      ....+.+...+..+-  ...+|-..++|++    +++.+|.+.         ++.+++||.|+.+|+.+.--.       
T Consensus        15 ~~e~~~v~~vl~sg~--i~~G~~v~~FE~~----~ae~~G~k~---------ava~~sgT~AL~laL~al~ig-------   72 (374)
T COG0399          15 EEELAAVQEVLKSGW--LTGGPFVRRFEQA----FAEYLGVKY---------AVAVSSGTAALHLALLALAIG-------   72 (374)
T ss_pred             hHHHHHHHHHHHcCC--eecChHHHHHHHH----HHHHhCCCe---------EEEecChHHHHHHHHHhcCCC-------
Confidence            334445555554442  2347878888875    778888864         688999999999988754311       


Q ss_pred             cCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC
Q 037144          171 ENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD  250 (502)
Q Consensus       171 ~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id  250 (502)
                         ++++|+++..+..+..+++-+.|+   +++.|++|++ ++.||++.||++|+++++      .|+..+   ..|...
T Consensus        73 ---~GDeVI~ps~TfvATan~i~~~Ga---~PVFvDid~~-T~nid~~~ie~aIt~~tK------AIipVh---l~G~~~  136 (374)
T COG0399          73 ---PGDEVIVPSFTFVATANAVLLVGA---KPVFVDIDPD-TLNIDPDLIEAAITPRTK------AIIPVH---LAGQPC  136 (374)
T ss_pred             ---CCCEEEecCCchHHHHHHHHHcCC---eEEEEecCCc-ccCCCHHHHHHHcccCCe------EEEEeh---hccCCC
Confidence               788999999999999999999999   9999999975 689999999999998765      565554   678889


Q ss_pred             ChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCccc
Q 037144          251 PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQY  330 (502)
Q Consensus       251 pl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~y  330 (502)
                      ++++|.++|++||++++.|+|++-+...-.+.   .-.+..+-+++|.+.|.+.+. ..|++++.|++.......     
T Consensus       137 dm~~i~~la~~~~l~vIEDaAqa~Ga~y~gk~---vGt~Gd~~~fSF~~~K~ittg-EGGav~tnd~ela~k~~~-----  207 (374)
T COG0399         137 DMDAIMALAKRHGLPVIEDAAQAHGATYKGKK---VGSFGDIGAFSFHATKNLTTG-EGGAVVTNDEELAEKARS-----  207 (374)
T ss_pred             CHHHHHHHHHHcCCeEEEEcchhccCeecCcc---cccccceEEEEecCCCCcccc-CceEEEeCCHHHHHHHHH-----
Confidence            99999999999999999999998775432211   222445668888899998766 677777777655432211     


Q ss_pred             ccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEE
Q 037144          331 LKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLV  410 (502)
Q Consensus       331 l~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v  410 (502)
                      +...+..   ...  ....+....+-..+--.+-+++.....+.++++.++..+++++..+.|++++++.+...+....-
T Consensus       208 lr~hG~~---~~~--~~~y~~~~~G~N~rm~~iqAAigl~QL~~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~  282 (374)
T COG0399         208 LRNHGLS---RDA--VFKYLHEELGYNYRLTEIQAAIGLAQLERLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVH  282 (374)
T ss_pred             HHHhCcC---CCc--cccceeeecccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCcee
Confidence            1111100   000  00111122222333334445555555688899999999999999999999988776544332212


Q ss_pred             EEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcE---EEEeee----E---------------
Q 037144          411 CFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKV---FMTHAI----V---------------  468 (502)
Q Consensus       411 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~---~~~~~~----~---------------  468 (502)
                      .+...+..++.                  +    ......+.+.|++.|..   +..+..    +               
T Consensus       283 ~~~~~~i~~~~------------------~----~~~R~~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae  340 (374)
T COG0399         283 AWHLYTILVDE------------------E----GISRDALMESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAE  340 (374)
T ss_pred             eeeeeEEEecC------------------C----CCCHHHHHHHHHhCCCCceEEeeccccchhhhcccccccCCCchHH
Confidence            22211110000                  0    01134566777777543   111100    0               


Q ss_pred             -CCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          469 -GGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       469 -~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                       .....+++= +++..+++|++++++.|+++...
T Consensus       341 ~~~~r~l~LP-~~p~l~~~~~~~V~~~l~~~~~~  373 (374)
T COG0399         341 DLSERILSLP-LHPNLSEEDVDRVIEALKEVLGS  373 (374)
T ss_pred             HHhhCeEEcc-CCCCCCHHHHHHHHHHHHHHhcc
Confidence             012345554 36778888999999999988754

>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]

Probab=99.81  E-value=2.3e-18  Score=166.85  Aligned_cols=369  Identities=10%  Similarity=0.037  Sum_probs=242.7

Q ss_pred             HHHHHHHHhhcCCCCCCCCCcccccCCCCCCHHHHHHHHHHhhcCCC-CcccccChhhHHHHHHHHHHHHHhcCCCCccC
Q 037144           58 TILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVV-GLDWISSPAAVELENIVMDWLGQMLDLPKSFL  136 (502)
Q Consensus        58 ~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~-~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~  136 (502)
                      .+..++.+........  +|  +|.-...-.+|..+.+.+....... ...|..+-+..++.+.+++.+++++|..... 
T Consensus        18 ~vw~e~~~la~e~~~~--~~--LgqGfp~~~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~-   92 (420)
T KOG0257|consen   18 YVWTEINRLAAEHKVP--NP--LGQGFPDFPPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDP-   92 (420)
T ss_pred             cHHHHHHHHHHhcCCC--Cc--ccCCCCCCCCcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCC-
Confidence            4555555544433322  22  6665566778899998888877553 5667777888999999999999988753211 


Q ss_pred             cCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecC------CC
Q 037144          137 FSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTT------KS  210 (502)
Q Consensus       137 ~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~------~~  210 (502)
                         ..++++|.|+.+++..+++...+           +++.|++-++.+.++.....+.|.   ..+.||..      ..
T Consensus        93 ---~~eVlVT~GA~~ai~~~~~~l~~-----------~GDeVii~eP~fd~Y~~~~~maG~---tpv~v~~~~~~g~~~s  155 (420)
T KOG0257|consen   93 ---DDEVLVTAGANEAISSALLGLLN-----------PGDEVIVFEPFFDCYIPQVVMAGG---TPVFVPLKPKEGNVSS  155 (420)
T ss_pred             ---cccEEEecCchHHHHHHHHHHcC-----------CCCEEEEecCcchhhhhHHhhcCC---cceeeccccccccccC
Confidence               12699999999999888888776           788999999999999999999999   89999887      33


Q ss_pred             CCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC---ChhHHHHHHHHhCCEEEeecccccccccCccc---hh
Q 037144          211 SSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD---PLKPLCDVAKQFGIWVHVDAAYAGSACICPEF---RH  284 (502)
Q Consensus       211 ~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id---pl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~---~~  284 (502)
                      .+|.+|++.||.+++++++      +|+++.++|++|.+-   .|++|++||++||+|++.|.+|........++   ..
T Consensus       156 ~~~~~D~~~le~~~t~kTk------~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~as  229 (420)
T KOG0257|consen  156 SDWTLDPEELESKITEKTK------AIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIAS  229 (420)
T ss_pred             ccccCChHHHHhhccCCcc------EEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeec
Confidence            5799999999999999876      899999999999984   58999999999999999999996655432211   11


Q ss_pred             hhcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCC---Cc
Q 037144          285 FIDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRF---RS  360 (502)
Q Consensus       285 ~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~---~a  360 (502)
                       +.|+.....-+.++.|+++ +....|+++. ++.++......+...                    .+.++.++   .+
T Consensus       230 -lPgm~ertitvgS~gKtf~~TGWrlGW~ig-p~~L~~~~~~vh~~~--------------------~~~~~Tp~q~A~a  287 (420)
T KOG0257|consen  230 -LPGMYERTITVGSFGKTFGVTGWRLGWAIG-PKHLYSALFPVHQNF--------------------VFTCPTPIQEASA  287 (420)
T ss_pred             -CCchhheEEEeccccceeeeeeeeeeeeec-hHHhhhhHHHHhhcc--------------------ccccCcHHHHHHH
Confidence             2344344455667999996 6677888887 554433222222111                    11122111   11


Q ss_pred             hHHHHHH--HHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccc
Q 037144          361 LKLWVVI--RNFG-VANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQ  437 (502)
Q Consensus       361 l~~~~~l--~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~  437 (502)
                      .+....+  ..-+ .....++.+.+.++++.|.+.|.++ |+.+..+.....+...+....  .++.             
T Consensus       288 ~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~l-g~~v~~p~gayyl~adfs~~~--~~~~-------------  351 (420)
T KOG0257|consen  288 AAFALELACLQPGGSYFITELVKEYKEKRDILAKALEEL-GLKVTGPEGAYYLWADFSLAK--SWPF-------------  351 (420)
T ss_pred             HHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhc-CCccccCCCceEEEEeccccc--cCCc-------------
Confidence            1111111  1112 1334558899999999999999999 899875554444444443111  0000             


Q ss_pred             cchhHhhHH-HHHHHHHHHHhc-CcEEEEeeeECC-------EEEEEEEecCCCCcHHHHHHHHHHHHH
Q 037144          438 FSEEERTNE-FNRELLESINVS-GKVFMTHAIVGG-------IYVLRFAAGNSMTMESHVRAAWTVVQE  497 (502)
Q Consensus       438 ~~~~~~~~~-~~~~l~~~l~~~-g~~~~~~~~~~g-------~~~lR~~~~~~~t~~~di~~~~~~l~~  497 (502)
                        ..+..++ ....+...+..+ |.+++++..+..       ..++|++++   -+++.++.+++.+++
T Consensus       352 --~~~~~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~~~~---k~~~~L~~a~e~l~~  415 (420)
T KOG0257|consen  352 --FEEILEKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRFCFC---KADETLRKAIERLKK  415 (420)
T ss_pred             --chhhccCCCceeeehhhhccCcEEEeCchhcCCchhhHHHHHHHHHHHH---hhHHHHHHHHHHHhh
Confidence              0000000 012334444443 556666665532       346777765   356678888888774

>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis

Probab=99.81  E-value=3.2e-18  Score=173.64  Aligned_cols=234  Identities=15%  Similarity=0.166  Sum_probs=165.4

Q ss_pred             cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144          110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ  189 (502)
Q Consensus       110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~  189 (502)
                      ..|...++|+.    +++++|.+         ..+++++|++|+..++.+...           +++.|+++...|.+..
T Consensus        38 ~~p~~~~le~~----la~l~g~~---------~a~~~~sG~~Ai~~~l~~l~~-----------~gd~Vl~~~~~y~~~~   93 (369)
T cd00614          38 GNPTVDALEKK----LAALEGGE---------AALAFSSGMAAISTVLLALLK-----------AGDHVVASDDLYGGTY   93 (369)
T ss_pred             CChhHHHHHHH----HHHHHCCC---------CEEEEcCHHHHHHHHHHHHcC-----------CCCEEEECCCCcchHH
Confidence            56666777765    56677754         368888999999888776643           5778888888887654


Q ss_pred             H----HHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144          190 K----AAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW  265 (502)
Q Consensus       190 ~----aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~  265 (502)
                      .    .+...|+   +++.++.+       |++++++++++.      +.+|++..++|++|.+.|+++|+++|++||++
T Consensus        94 ~~~~~~~~~~g~---~~~~v~~~-------d~~~l~~~i~~~------~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~  157 (369)
T cd00614          94 RLFERLLPKLGI---EVTFVDPD-------DPEALEAAIKPE------TKLVYVESPTNPTLKVVDIEAIAELAHEHGAL  157 (369)
T ss_pred             HHHHHHHhhcCe---EEEEeCCC-------CHHHHHHhcCCC------CeEEEEECCCCCCCeecCHHHHHHHHHHcCCE
Confidence            3    4556787   88888753       588899888653      34788899999999999999999999999999


Q ss_pred             EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCccc
Q 037144          266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQ  343 (502)
Q Consensus       266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~  343 (502)
                      ++||++|+.+....+ ..      .++|.++.+++|+++++..  .|+++.+++.... .+.....++.           
T Consensus       158 livD~t~~~~~~~~~-~~------~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~-~l~~~~~~~g-----------  218 (369)
T cd00614         158 LVVDNTFATPYLQRP-LE------LGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQ-RLRFLRLALG-----------  218 (369)
T ss_pred             EEEECCCcchhcCCh-hh------hCCcEEEeccceeccCCCCceEEEEEeCcHHHHH-HHHHHHHhhC-----------
Confidence            999999987654221 11      1789999999999987643  5666665533322 1111111110           


Q ss_pred             ccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-----------------C
Q 037144          344 EVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR-----------------N  406 (502)
Q Consensus       344 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~-----------------~  406 (502)
                                  -...+...|++++.+  +.+..++++..++++++.+.|++.|+++-+.-|                 .
T Consensus       219 ------------~~~~p~~a~~~l~~l--~tl~~r~~~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~  284 (369)
T cd00614         219 ------------TILSPFDAWLLLRGL--KTLPLRMERHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGY  284 (369)
T ss_pred             ------------CCCCHHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCC
Confidence                        012345666666544  567778999999999999999999877644322                 3


Q ss_pred             eeEEEEEeec
Q 037144          407 FSLVCFRVTP  416 (502)
Q Consensus       407 ~~~v~f~~~~  416 (502)
                      .++++|.+.+
T Consensus       285 g~i~s~~l~~  294 (369)
T cd00614         285 GGVFSFELKG  294 (369)
T ss_pred             ceEEEEEeCC
Confidence            6788888753

This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.

>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []

Probab=99.81  E-value=1.9e-19  Score=180.28  Aligned_cols=232  Identities=18%  Similarity=0.161  Sum_probs=161.7

Q ss_pred             HHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCC
Q 037144          120 IVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDR  199 (502)
Q Consensus       120 ~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~  199 (502)
                      +..+.+++.||.+.++        ++++|+|.+|..++.++..           +++.|+++..+|-|+..++.+.|+  
T Consensus        70 eAe~~aA~~fGAd~t~--------flvnGsT~g~~a~i~a~~~-----------~gd~VLv~RN~HkSv~~alil~ga--  128 (417)
T PF01276_consen   70 EAEELAARAFGADKTF--------FLVNGSTSGNQAMIMALCR-----------PGDKVLVDRNCHKSVYNALILSGA--  128 (417)
T ss_dssp             HHHHHHHHHHTESEEE--------EESSHHHHHHHHHHHHHTT-----------TTCEEEEETT--HHHHHHHHHHTE--
T ss_pred             HHHHHHHHhcCCCeEE--------EEecCchHHHHHHHHHhcC-----------CCCEEEEcCCcHHHHHHHHHHcCC--
Confidence            3447789999998864        7788888999888877765           788999999999999999999999  


Q ss_pred             CCEEEEecCCCC---CcccCH-----HHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecc
Q 037144          200 KNIRAIKTTKSS---SYGLSA-----ESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAA  271 (502)
Q Consensus       200 ~~v~~v~~~~~~---~~~~d~-----~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA  271 (502)
                       .+++|+.....   -+.+++     +.++++|++..... .|.+|++|.+| ..|.+-++++|+++|+++++.|+||+|
T Consensus       129 -~Pvyi~p~~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k-~~~~vvlt~PT-Y~Gv~~di~~I~~~~h~~~~~llvDEA  205 (417)
T PF01276_consen  129 -IPVYIPPEDNEYGIIGGISPDEFNEEDIEEALKEHPDAK-APRLVVLTSPT-YYGVCYDIKEIAEICHKHGIPLLVDEA  205 (417)
T ss_dssp             -EEEEEEEEE-TTS-BEEB-GGGGSHHHHHHHHHHCTTCH-CESEEEEESS--TTSEEE-HHHHHHHHCCTECEEEEE-T
T ss_pred             -eEEEecCCccccCCccCCChhhhhHHHHHHHHHhCcccc-CceEEEEeCCC-CCeEEECHHHHHHHhcccCCEEEEEcc
Confidence             99998875211   135666     99999998764322 15567777765 899999999999999999999999999


Q ss_pred             cccccccCccchhhhcCCCCCC-------eeEEccCCcCCCCCcceEEEeeCch-hhhhhh--------cCCcccccCcc
Q 037144          272 YAGSACICPEFRHFIDGVECVD-------SFSFNPHKWLFTTLDCCCLWVKDPS-CLLSTL--------STNPQYLKNEA  335 (502)
Q Consensus       272 ~g~~~~~~~~~~~~~~~~~~aD-------si~~~~hK~l~~p~~~g~~~~r~~~-~l~~~~--------~~~~~yl~~~~  335 (502)
                      ||+.+.+.+-++..+.  -++|       .++-|.||.+.+-..++++.+++.. .-.+.+        +.+|+|+..  
T Consensus       206 hGah~~F~~lp~~a~~--~gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~~v~~~~~~~~l~~~~TTSPSY~lm--  281 (417)
T PF01276_consen  206 HGAHFGFHPLPRSALA--LGADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDRIVDHERVNEALSMHQTTSPSYPLM--  281 (417)
T ss_dssp             T-TTGGCSGGGTTCSS--TTSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCCCTTHHHHHHHHHHHS-SS--HHHH--
T ss_pred             ccccccCCCCccchhh--ccCccccccceeeeechhhcccccccceEEEecCCCcccHHHHHHHHHHHcCCChHHHHH--
Confidence            9998877644333221  2788       9999999999999999999998875 211111        222222211  


Q ss_pred             CCCCCcccccCCCcccccCCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHH---hcCCCeEEecCC
Q 037144          336 TDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF-GVANLRNFIRSHVGMAKLFERLV---TSDKRFEVAFPR  405 (502)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~la~~l~~~l---~~~~~~~l~~~~  405 (502)
                                               ..+=.+.+.+ +.+| ++++++..++++.+++.|   .++++|+++.+.
T Consensus       282 -------------------------ASlD~a~~~m~~~~G-~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~~~~  329 (417)
T PF01276_consen  282 -------------------------ASLDVARAQMEEEEG-RELLEEAIELAEEFRKKINRLNDIWGFKVLGPE  329 (417)
T ss_dssp             -------------------------HHHHHHHHHHSHHHH-HHHHHHHHHHHHHHHHHHHHHCCT-SSEESS-S
T ss_pred             -------------------------HHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHhcCCCceEecCCcc
Confidence                                     1122233334 3333 467788888888888888   678889988654

One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.

>PLN02607 1-aminocyclopropane-1-carboxylate synthase

Probab=99.81  E-value=9.2e-18  Score=173.72  Aligned_cols=323  Identities=12%  Similarity=0.093  Sum_probs=206.2

Q ss_pred             cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144          110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ  189 (502)
Q Consensus       110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~  189 (502)
                      ...+...+.+++++++.+.+|.....   .....++|+|+++++.+.+.+..+           +++.|+++.+.+..+.
T Consensus        93 ~~~G~~~LR~aiA~~l~~~~~~~~~v---~p~~Ivit~G~t~al~~l~~~l~~-----------pGD~Vlv~~P~Y~~f~  158 (447)
T PLN02607         93 DYHGLKSFRQAMASFMEQIRGGKARF---DPDRIVLTAGATAANELLTFILAD-----------PGDALLVPTPYYPGFD  158 (447)
T ss_pred             CCcchHHHHHHHHHHHHHhcCCCCCc---CHHHeEEcCChHHHHHHHHHHhCC-----------CCCEEEEcCCCCcchH
Confidence            33456789999999999887731110   012688999999988665554433           6788889998988887


Q ss_pred             HHHH-HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hhHHHHHHHHhCCE
Q 037144          190 KAAQ-IVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LKPLCDVAKQFGIW  265 (502)
Q Consensus       190 ~aa~-~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~eI~~i~~~~g~~  265 (502)
                      ..+. ..|+   +++.|+++.++++.+|++++++++++..+.|.++.+|+++.++|++|.+-+   +++|.++|++||++
T Consensus       159 ~~~~~~~g~---~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~  235 (447)
T PLN02607        159 RDLRWRTGV---KIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIH  235 (447)
T ss_pred             HHHHhcCCc---EEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCE
Confidence            7666 4788   999999876556789999999999987777777778888999999999855   78889999999999


Q ss_pred             EEeecccccccccCccchh---hhcCCC--C-CC--eeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcccccCccC
Q 037144          266 VHVDAAYAGSACICPEFRH---FIDGVE--C-VD--SFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEAT  336 (502)
Q Consensus       266 lhVDaA~g~~~~~~~~~~~---~~~~~~--~-aD--si~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~  336 (502)
                      +++|.+|+...+..+.+..   ......  . .+  .+..++.|.++ .....|+++..++.... .......|..    
T Consensus       236 lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~GlRvG~ivs~n~~l~~-~~~~~~~~~~----  310 (447)
T PLN02607        236 LVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVT-TARRMSSFTL----  310 (447)
T ss_pred             EEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCcceEEEEEEcCHHHHH-HHHHHhhcCC----
Confidence            9999999876543222211   111111  1 11  34578999997 55778888875554322 2211111100    


Q ss_pred             CCCCcccccCCCcccccCCCCCCchHHHHHHHHhcH-----HHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEE
Q 037144          337 DQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGV-----ANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVC  411 (502)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~-----~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~  411 (502)
                                       .    ..+...++...+..     ..+.+..+++.+..+.+.+.|++. ++++. ++..++++
T Consensus       311 -----------------~----s~~~q~~~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~-gi~~~-~~~ag~fv  367 (447)
T PLN02607        311 -----------------V----SSQTQHLLASMLSDEEFTENYIRTNRERLRKRYEMIVQGLRRA-GIECL-KGNAGLFC  367 (447)
T ss_pred             -----------------C----CHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCcc-cCCeeEEE
Confidence                             0    11222222222221     234455666777788888889886 77765 45555555


Q ss_pred             EEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcEEEEeeeEC--CEEEEEEEecCCCCcHHHH
Q 037144          412 FRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKVFMTHAIVG--GIYVLRFAAGNSMTMESHV  488 (502)
Q Consensus       412 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~--g~~~lR~~~~~~~t~~~di  488 (502)
                      |.-.+.....                 ..    .+...++.+++.++ |..+.++..++  ..+++|+++++.  +++++
T Consensus       368 w~~L~~~~~~-----------------~~----~~~e~~l~~~ll~~~gV~v~pG~~f~~~~~g~fRi~fa~~--~~~~l  424 (447)
T PLN02607        368 WMNLSPLLET-----------------PT----REGELALWDSILREVKLNISPGSSCHCSEPGWFRVCFANM--SEDTL  424 (447)
T ss_pred             EEEchHhhcC-----------------CC----chhHHHHHHHHHHhCCEEEcCccccCCCCCCEEEEEeccC--CHHHH
Confidence            4332211000                 00    01123566666654 65443333343  368999999752  57789


Q ss_pred             HHHHHHHHHHHH
Q 037144          489 RAAWTVVQEHLE  500 (502)
Q Consensus       489 ~~~~~~l~~~~~  500 (502)
                      +..++.|.++.+
T Consensus       425 ~~gl~Ri~~~l~  436 (447)
T PLN02607        425 EVALKRIHRFMD  436 (447)
T ss_pred             HHHHHHHHHHHH
Confidence            999999988765

>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]

Probab=99.81  E-value=2.1e-17  Score=160.11  Aligned_cols=325  Identities=14%  Similarity=0.161  Sum_probs=213.2

Q ss_pred             ChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEE-cCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144          111 SPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVI-QGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ  189 (502)
Q Consensus       111 ~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~-t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~  189 (502)
                      ..+..++-.++.+||+++.|++.         +.+ ..+|+++-++++++.|.....+ |.  ..+.+|++++.+|-..-
T Consensus       104 vqG~l~li~~Lq~~L~~ITG~Da---------vsLQP~AGAqGE~aGll~Ir~YHe~r-G~--~~R~~~LIP~SAHGTNP  171 (496)
T COG1003         104 VQGYLELIYELQEWLKEITGMDA---------VSLQPNAGAQGEYAGLLAIRAYHESR-GE--GHRNICLIPDSAHGTNP  171 (496)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCce---------eeccCCCCcchhhHHHHHHHHHHHHc-CC--CcCcEEEeeccccCCCh
Confidence            34667888899999999999975         333 3467788888888887764433 21  16788999999999999


Q ss_pred             HHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc-CChhHHHHHHHHhCCEEEe
Q 037144          190 KAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV-DPLKPLCDVAKQFGIWVHV  268 (502)
Q Consensus       190 ~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i-dpl~eI~~i~~~~g~~lhV  268 (502)
                      .+|.+.|.   +|+.|++++  +|.+|+++|++++.++++      ++.+|.++| .|.+ .+|.||++|.+++|..+..
T Consensus       172 ASAam~G~---~VV~V~~~~--~G~VDlddLk~k~~~~~A------alMiTnPsT-~GvFE~~I~ei~~ivH~~Gg~vY~  239 (496)
T COG1003         172 ASAAMAGF---KVVVVKCDE--NGNVDLDDLRAKAEDNLA------ALMITNPST-LGVFEEDIREICEIVHEAGGQVYY  239 (496)
T ss_pred             hhHhhcCc---eEEEEecCC--CCCccHHHHHHHhcccee------EEEeccCcc-cccchhhHHHHHHHHHHcCCEEEe
Confidence            99999999   999999986  569999999999987664      678888774 5777 6899999999999999999


Q ss_pred             ecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-----cceEEEeeCchhhhhhhcCCcccccCccCCCCCccc
Q 037144          269 DAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-----DCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQ  343 (502)
Q Consensus       269 DaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-----~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~  343 (502)
                      |||.--..+-.-....     -++|.+-++.||+|.+|-     |.|-+.+|..  +..++.....|  .....     .
T Consensus       240 DGANlNA~vG~~rPGd-----~G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~--L~pfLP~p~~~--~~~~~-----y  305 (496)
T COG1003         240 DGANLNAIVGLARPGD-----MGFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAH--LAPFLPGPVVY--HDVGE-----Y  305 (496)
T ss_pred             cCcchhhhhccccccc-----cccceEEeecccccccCCCCCCCCCCceehHhh--ccccCCCCccc--CCCcc-----c
Confidence            9986332221111112     189999999999998774     4555776532  22222110011  00000     0


Q ss_pred             ccCCC-cccccCCCC-CC---c-hHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCC---eeEEEEEe
Q 037144          344 EVGYK-DWQITLCRR-FR---S-LKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRN---FSLVCFRV  414 (502)
Q Consensus       344 ~~~~~-~~~~~~sr~-~~---a-l~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~---~~~v~f~~  414 (502)
                      ..+.. .+++.-++. ++   . ...|+-++.+|.+|+++.-+...-+|+|+.++|+.  .++++..+.   -.-+.+..
T Consensus       306 ~~~~~~~~s~g~~~a~~Gs~~il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~--~y~~~y~~~~~~~HE~ild~  383 (496)
T COG1003         306 RLDYDGKKSIGVSAAPYGSASILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKG--YYPVPYTGENRVAHECILDA  383 (496)
T ss_pred             cccCCCCccceeeccccCcchHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhh--cCccccCCCCcceeEEEeec
Confidence            00100 011111221 12   1 47799999999999999999999999999999986  477754433   22233333


Q ss_pred             ecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECC---EEEEEEEecCCCCcHHHHHHH
Q 037144          415 TPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGG---IYVLRFAAGNSMTMESHVRAA  491 (502)
Q Consensus       415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g---~~~lR~~~~~~~t~~~di~~~  491 (502)
                      .|..                       +...-....+.++|.+-|.  -.+|....   ...+=+=.+.. -+++++|++
T Consensus       384 r~l~-----------------------~~~Gv~~~DvAKrLlD~Gf--HaPT~~FPliV~~tLMIEPTEs-Esk~eLDrf  437 (496)
T COG1003         384 RPLK-----------------------KETGVRALDVAKRLLDYGF--HAPTMYFPLIVAGTLMIEPTES-ESKEELDRF  437 (496)
T ss_pred             hHhH-----------------------hhcCCcHHHHHHHHHhcCC--CCCcccCccccccceeecCCCC-CCHHHHHHH
Confidence            3210                       0001123456677777785  33332211   22333333322 345799999


Q ss_pred             HHHHHHHHHh
Q 037144          492 WTVVQEHLEA  501 (502)
Q Consensus       492 ~~~l~~~~~~  501 (502)
                      ++++.+++++
T Consensus       438 ~dami~I~~E  447 (496)
T COG1003         438 IDAMIAIREE  447 (496)
T ss_pred             HHHHHHHHHH
Confidence            9999988764

>PRK10534 L-threonine aldolase; Provisional

Probab=99.81  E-value=8e-18  Score=168.67  Aligned_cols=311  Identities=14%  Similarity=0.096  Sum_probs=184.5

Q ss_pred             HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144           90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG  169 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~  169 (502)
                      |.+... +.... .....|...|...++|+.    +++++|.+.         .++++||+++++.++.+...       
T Consensus        14 ~~~~~a-~~~~~-~~~~~Y~~~~~~~~L~~~----la~~~g~~~---------~~v~~~g~~a~~~~l~~~~~-------   71 (333)
T PRK10534         14 RAMLEA-MMAAP-VGDDVYGDDPTVNALQDY----AAELSGKEA---------ALFLPTGTQANLVALLSHCE-------   71 (333)
T ss_pred             HHHHHH-HHhcc-CCCcccCCCHHHHHHHHH----HHHHhCCCe---------EEEeCchHHHHHHHHHHhcC-------
Confidence            444444 43322 233346566777777776    566678764         47888899998888776532       


Q ss_pred             ccCCCCeEEEeCCCCchhHHHH--HHHcC-CCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccc
Q 037144          170 RENISKLVVYSSDQTHCAFQKA--AQIVG-IDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAI  246 (502)
Q Consensus       170 ~~~~~~~~v~~s~~~H~s~~~a--a~~~G-lg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~  246 (502)
                          +++.|+++...|.+...+  +...| +   .++.++++.  ++.+|+++|++++++....+.++.+|+++.+  ++
T Consensus        72 ----~gd~vi~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~--~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np--~~  140 (333)
T PRK10534         72 ----RGEEYIVGQAAHNYLYEAGGAAVLGSI---QPQPIDAAA--DGTLPLDKVAAKIKPDDIHFARTRLLSLENT--HN  140 (333)
T ss_pred             ----CCCeeEEechhhhhHhcCCchHHhcCc---eEEeecCCC--CCCCCHHHHHHhhcccCcCcccceEEEEecC--CC
Confidence                556677777777543332  34444 4   677777653  5799999999998653211112335666543  45


Q ss_pred             cccCChhHH---HHHHHHhCCEEEeeccccccccc--CccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhh
Q 037144          247 TAVDPLKPL---CDVAKQFGIWVHVDAAYAGSACI--CPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLL  321 (502)
Q Consensus       247 G~idpl~eI---~~i~~~~g~~lhVDaA~g~~~~~--~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~  321 (502)
                      |.+-|.++|   +++|++||+|++||+||.-....  ........   ...|.++++++|.++.+  .|++++.+++...
T Consensus       141 G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~---~~~~~~~~s~SK~~~~~--~G~~~~~~~~~i~  215 (333)
T PRK10534        141 GKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKEIT---QYCDSFTICLSKGLGTP--VGSLLVGNRDYIK  215 (333)
T ss_pred             CeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHHH---hcCCEEEEEeEcCCCCc--ccceEEcCHHHHH
Confidence            998776654   57889999999999997521110  11111111   13576778899988876  5654455665433


Q ss_pred             hhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 037144          322 STLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEV  401 (502)
Q Consensus       322 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l  401 (502)
                      ........+ ..                     +-...++.+.+++..+  +...+.+++..+.++++.+.|+++ |+++
T Consensus       216 ~~~~~~~~~-~~---------------------~~~~~~~~~a~~~~~l--~~~~~~~~~~~~~r~~l~~~L~~~-g~~~  270 (333)
T PRK10534        216 RARRWRKMT-GG---------------------GMRQAGILAAAGLYAL--KHNVARLQEDHDNAAWLAEQLREA-GADV  270 (333)
T ss_pred             HHHHHHHHh-CC---------------------chhhHHHHHHHHHHHH--HhhHHHHHHHHHHHHHHHHHHHhC-CCcc
Confidence            221111000 00                     0000122222233332  112344555556778999999987 7887


Q ss_pred             ecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCC
Q 037144          402 AFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNS  481 (502)
Q Consensus       402 ~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~  481 (502)
                      . ++..+++.+++.+.                           +  ..++.+.|.++|.++ .+.     ..+|++.+ .
T Consensus       271 ~-~~~~nfv~~~~~~~---------------------------~--~~~~~~~l~~~gi~v-~~~-----~~~rl~~~-~  313 (333)
T PRK10534        271 M-RQDTNMLFVRVGEE---------------------------Q--AAALGEYMRERNVLI-NAS-----PIVRLVTH-L  313 (333)
T ss_pred             C-CCCceEEEEECCch---------------------------h--HHHHHHHHHHcCeee-cCC-----ceEEEEEE-e
Confidence            6 55777777666421                           0  245667777788754 322     25899874 4


Q ss_pred             CCcHHHHHHHHHHHHHHHH
Q 037144          482 MTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       482 ~t~~~di~~~~~~l~~~~~  500 (502)
                      +.++++++++++.|++...
T Consensus       314 r~t~e~~~~~~~~l~~~~~  332 (333)
T PRK10534        314 DVSREQLAEVVAHWRAFLA  332 (333)
T ss_pred             CCCHHHHHHHHHHHHHHhc
Confidence            5678899999999987653

>TIGR01328 met_gam_lyase methionine gamma-lyase

Probab=99.81  E-value=1.3e-17  Score=169.92  Aligned_cols=222  Identities=17%  Similarity=0.187  Sum_probs=156.2

Q ss_pred             cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh--
Q 037144          110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA--  187 (502)
Q Consensus       110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s--  187 (502)
                      ..|...++|+.    +++++|.+.         .+++++|+.|+..++.+...           +++.|+++...|.+  
T Consensus        57 ~~p~~~~le~~----lA~l~g~~~---------av~~~sG~~Ai~~~l~al~~-----------~Gd~Vi~~~~~y~~t~  112 (391)
T TIGR01328        57 GNPTVSNLEGR----IAFLEGTEA---------AVATSSGMGAIAATLLTILK-----------AGDHLISDECLYGCTF  112 (391)
T ss_pred             CCchHHHHHHH----HHHHhCCCc---------EEEECCHHHHHHHHHHHHhC-----------CCCEEEEecCcchHHH
Confidence            45656666655    778888753         58888899888766655432           56778888876643  


Q ss_pred             --HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144          188 --FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW  265 (502)
Q Consensus       188 --~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~  265 (502)
                        +...+...|+   +++.++.+       |++++++++++.+      .+|++..++|++|.+-|+++|+++|+++|++
T Consensus       113 ~~~~~~~~~~G~---~~~~vd~~-------d~e~l~~~i~~~t------klV~le~p~Np~G~v~dl~~I~~la~~~gi~  176 (391)
T TIGR01328       113 ALLEHALTKFGI---QVDFINMA-------IPEEVKAHIKDNT------KIVYFETPANPTMKLIDMERVCRDAHSQGVK  176 (391)
T ss_pred             HHHHHHHhcCCe---EEEEECCC-------CHHHHHHhhccCC------eEEEEECCCCCCCcccCHHHHHHHHHHcCCE
Confidence              3445566788   88888753       7899999887544      3888899999999999999999999999999


Q ss_pred             EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcc-eEEEeeCchhhhhhhcCCcccccCccCCCCCcccc
Q 037144          266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDC-CCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQE  344 (502)
Q Consensus       266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~-g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~  344 (502)
                      ++||++|+.+....+ ..      .++|.++.+++|+++++... |.+++.+++.+.........++             
T Consensus       177 livD~a~a~~~~~~~-~~------~g~Divv~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~~~~~-------------  236 (391)
T TIGR01328       177 VIVDNTFATPMLTNP-VA------LGVDVVVHSATKYIGGHGDVVAGLICGKAELLQQIRMVGIKDM-------------  236 (391)
T ss_pred             EEEECCCchhccCCc-hh------cCCCEEEccccccccCCCCceEEEEEcCHHHHHHHHHHHHHhC-------------
Confidence            999999976543222 11      27999999999999877652 4444555544332211110000             


Q ss_pred             cCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144          345 VGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA  402 (502)
Q Consensus       345 ~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~  402 (502)
                               .+....+...|.+++  +.+.+..++++..++++++.+.|++.|+++-+
T Consensus       237 ---------~g~~l~~~~a~l~l~--~L~tl~~r~~~~~~na~~la~~L~~~p~v~~v  283 (391)
T TIGR01328       237 ---------TGSVISPFDAWLILR--GLKTLNIRMKRHSENAMKVAEYLKSHPAVEKV  283 (391)
T ss_pred             ---------CCCCCCcHHHHHHHh--CcCcHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence                     011224455666665  44667788999999999999999999988754

This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.

>PRK04870 histidinol-phosphate aminotransferase; Provisional

Probab=99.81  E-value=2.6e-17  Score=166.51  Aligned_cols=313  Identities=12%  Similarity=0.099  Sum_probs=201.3

Q ss_pred             CHHHHHHHHHHhhcCC-CCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHH
Q 037144           88 SVAGIVGEMLSSGFNV-VGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLK  166 (502)
Q Consensus        88 ~~~~~~~~~l~~~~n~-~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~  166 (502)
                      .+|..+.+.+.+.+.. ....|.. ++..++    ++++++.+|.+...      ..++|+|+++++..++.+..+    
T Consensus        39 ~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~l----r~~ia~~~~~~~~~------~I~~t~G~~~~i~~~~~~~~~----  103 (356)
T PRK04870         39 RLPAELRAELGERLAEVALNRYPD-PRAAAL----KAALRAAMGVPAGA------DVLLGNGSDELIQLLALACAK----  103 (356)
T ss_pred             CCCHHHHHHHHHHhhccccccCCC-CCHHHH----HHHHHHHhCcCCCC------cEEEcCCHHHHHHHHHHHhcC----
Confidence            3444556666655533 2334543 443444    45566666775421      578888887777655544432    


Q ss_pred             HhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccc
Q 037144          167 KIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAI  246 (502)
Q Consensus       167 ~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~  246 (502)
                             +++.|+++..+|..+...++..|+   +++.+|+++  ++.+|+++|+++++...     +.+|+++.++|+|
T Consensus       104 -------~gd~vlv~~P~y~~~~~~~~~~g~---~~~~i~~~~--~~~~d~~~l~~~~~~~~-----~~~v~l~~p~NPt  166 (356)
T PRK04870        104 -------PGATVLAPEPGFVMYRMSAKLAGL---EFVGVPLTA--DFTLDLPAMLAAIAEHR-----PALVFLAYPNNPT  166 (356)
T ss_pred             -------CCCEEEECCCCHHHHHHHHHHcCC---EEEEecCCC--CCCCCHHHHHHHhhcCC-----CCEEEEcCCCCCC
Confidence                   677888999999999999999999   999999974  47899999999986421     2367778899999


Q ss_pred             cccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcC
Q 037144          247 TAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLST  326 (502)
Q Consensus       247 G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~  326 (502)
                      |.+-+.+++.++++..+.++++|++|..+..  ..+...+....+ -.+..+++|++......|+++.. +..+......
T Consensus       167 G~~~~~~~~~~i~~~~~~~ii~De~y~~~~~--~~~~~~~~~~~~-vi~~~S~SK~~~~GlRiG~~i~~-~~~i~~~~~~  242 (356)
T PRK04870        167 GNLFDDADVERIIEAAPGLVVVDEAYQPFAG--DSWLPRLARFPN-LLVMRTVSKLGLAGLRLGYLAGH-PAWIAELDKV  242 (356)
T ss_pred             CCCCCHHHHHHHHHHCCCEEEEECCchhhcC--cchHHHHhhCCC-EEEEecchhhhhHHHhhhhhhCC-HHHHHHHHHc
Confidence            9999999998888877899999999965432  111111221111 24567799954444557877654 3332222111


Q ss_pred             CcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC
Q 037144          327 NPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF-GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR  405 (502)
Q Consensus       327 ~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~  405 (502)
                      ...|                    .      ...+...++...+ ..+.+++..++..++++++.+.|++++++.+. ++
T Consensus       243 ~~~~--------------------~------~~~~~q~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~  295 (356)
T PRK04870        243 RPPY--------------------N------VNVLTQATALFALEHVDVLDAQAAQLRAERTRLAAALAALPGVTVF-PS  295 (356)
T ss_pred             cCCC--------------------c------CCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-CC
Confidence            1000                    0      0122222222222 12447778888889999999999998888764 55


Q ss_pred             CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC--CEEEEEEEecCCCC
Q 037144          406 NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG--GIYVLRFAAGNSMT  483 (502)
Q Consensus       406 ~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lR~~~~~~~t  483 (502)
                      ..+.+.+++. .                              ..++.+.+.++|..+..+..+.  +..++|++++    
T Consensus       296 ~~~~~~~~~~-~------------------------------~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~~----  340 (356)
T PRK04870        296 AANFILVRVP-D------------------------------AAAVFDGLKTRGVLVKNLSGMHPLLANCLRVTVG----  340 (356)
T ss_pred             CCeEEEEECC-C------------------------------HHHHHHHHHHCCEEEEECCCCCCCCCCeEEEeCC----
Confidence            5566666543 1                              2356666777787655443332  3569999986    


Q ss_pred             cHHHHHHHHHHHHHH
Q 037144          484 MESHVRAAWTVVQEH  498 (502)
Q Consensus       484 ~~~di~~~~~~l~~~  498 (502)
                      +.+++++++++|+++
T Consensus       341 ~~~~~~~l~~al~~~  355 (356)
T PRK04870        341 TPEENAQFLAALKAA  355 (356)
T ss_pred             CHHHHHHHHHHHHHh
Confidence            456999999999875

>PRK02731 histidinol-phosphate aminotransferase; Validated

Probab=99.81  E-value=2.5e-17  Score=167.31  Aligned_cols=289  Identities=14%  Similarity=0.063  Sum_probs=190.9

Q ss_pred             HHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCC
Q 037144          120 IVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDR  199 (502)
Q Consensus       120 ~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~  199 (502)
                      ++++.+++++|++.+       ..++|+|+++++...+.+...           +++.|+++.+.|..+...++..|+  
T Consensus        71 ~lr~~ia~~~~~~~~-------~i~~t~G~~~~l~~~~~~l~~-----------~gd~vl~~~p~y~~~~~~~~~~g~--  130 (367)
T PRK02731         71 ELKAALAEKFGVDPE-------RIILGNGSDEILELLARAYLG-----------PGDEVIYSEHGFAVYPIAAQAVGA--  130 (367)
T ss_pred             HHHHHHHHHhCcCHH-------HEEEcCCHHHHHHHHHHHhcC-----------CCCEEEEecCCHHHHHHHHHHcCC--
Confidence            344556677787654       578888888776444433321           567888888888777777888999  


Q ss_pred             CCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh--CCEEEeecccccccc
Q 037144          200 KNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF--GIWVHVDAAYAGSAC  277 (502)
Q Consensus       200 ~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~--g~~lhVDaA~g~~~~  277 (502)
                       +++.+|.+   ++.+|+++|++++++.      +.+|+++.++|+||.+-|+++|.++|+.+  |+|+++|++|..+..
T Consensus       131 -~~~~~~~~---~~~~~~~~l~~~~~~~------~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y~~~~~  200 (367)
T PRK02731        131 -KPVEVPAK---DYGHDLDAMLAAVTPR------TRLVFIANPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYAEYVR  200 (367)
T ss_pred             -eEEEeccc---CCCCCHHHHHHHhCCC------CcEEEEeCCCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcHHHhcc
Confidence             99999984   4689999999988643      34777889999999999999999999875  899999999976543


Q ss_pred             cCccch--hhhcCCCCCCeeEEccCCcCCC-CCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccC
Q 037144          278 ICPEFR--HFIDGVECVDSFSFNPHKWLFT-TLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITL  354 (502)
Q Consensus       278 ~~~~~~--~~~~~~~~aDsi~~~~hK~l~~-p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~  354 (502)
                      ......  ..+. ...-..++.++.|.++. +..+|+++..+ ... +.+......                   +.   
T Consensus       201 ~~~~~~~~~~~~-~~~~~i~~~S~SK~~g~~G~RiG~l~~~~-~~~-~~l~~~~~~-------------------~~---  255 (367)
T PRK02731        201 RKDYEDGLELVA-KFPNVVVTRTFSKAYGLAGLRVGYGIAPP-EII-DALNRVRQP-------------------FN---  255 (367)
T ss_pred             CcCcccHHHHHh-hcCCEEEEeeehHhhcCcccceeeeeCCH-HHH-HHHHHccCC-------------------CC---
Confidence            211110  1111 11112445578898864 45678887643 322 222111000                   00   


Q ss_pred             CCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcc
Q 037144          355 CRRFRSLKLWVVIRNFG-VANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYD  433 (502)
Q Consensus       355 sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~  433 (502)
                         ...+..+++.+.+. .+.+++..++..++.+++.+.|++. ++.+. ++..+++++++.+..               
T Consensus       256 ---~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~g~~~~i~~~~~~---------------  315 (367)
T PRK02731        256 ---VNSLALAAAVAALDDDAFVEKSRALNAEGMAWLTEFLAEL-GLEYI-PSVGNFILVDFDDGK---------------  315 (367)
T ss_pred             ---CCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCccC-CCCceEEEEECCCCC---------------
Confidence               02344455555543 3446777788888899999999887 77765 556667777663210               


Q ss_pred             cccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144          434 QYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       434 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~  500 (502)
                                   ...++.+.|.+.|..+.....+....++|++++    +.+++++++++|+++.+
T Consensus       316 -------------~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~----~~~e~~~l~~aL~~~~~  365 (367)
T PRK02731        316 -------------DAAEAYQALLKRGVIVRPVAGYGLPNALRITIG----TEEENRRFLAALKEFLA  365 (367)
T ss_pred             -------------CHHHHHHHHHHCCEEEEeCCCCCCCCeEEEecC----CHHHHHHHHHHHHHHHh
Confidence                         024567777777865444333332468999975    45699999999998765

>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase

Probab=99.81  E-value=2.1e-17  Score=168.64  Aligned_cols=338  Identities=12%  Similarity=0.101  Sum_probs=197.3

Q ss_pred             HHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCC
Q 037144           94 GEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENI  173 (502)
Q Consensus        94 ~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~  173 (502)
                      .+.+...+....  +..++...++|++    +++++|.+.         .++++|||+|+..++.+..-.          
T Consensus        13 ~~~v~~~~~~~~--~~~g~~~~~le~~----la~~~g~~~---------~v~~~sgt~al~~~l~al~~~----------   67 (380)
T TIGR03588        13 IDAVVEVLKSDF--LTQGPTVPAFEEA----LAEYVGAKY---------AVAFNSATSALHIACLALGVG----------   67 (380)
T ss_pred             HHHHHHHHhcCC--ccCChhHHHHHHH----HHHHHCCCe---------EEEEcCHHHHHHHHHHHcCCC----------
Confidence            334444443322  3345666666665    566667643         466678899987777654211          


Q ss_pred             CCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChh
Q 037144          174 SKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLK  253 (502)
Q Consensus       174 ~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~  253 (502)
                      +++.|+++...|.+...++...|+   +++.++++++ ++.+|+++|++++++..  ..++.+|+.++   .+|...|++
T Consensus        68 ~Gd~Viv~~~~~~~~~~~~~~~G~---~~~~~~~~~~-~~~~d~~~l~~~i~~~~--~~~t~~v~~~~---~~G~~~~~~  138 (380)
T TIGR03588        68 PGDRVWTTPITFVATANCALYCGA---KVDFVDIDPD-TGNIDEDALEKKLAAAK--GKLPKAIVPVD---FAGKSVDMQ  138 (380)
T ss_pred             CCCEEEeCCcchHHHHHHHHHcCC---EEEEEecCCC-cCCcCHHHHHHHhhccc--CCCceEEEEeC---CCCccCCHH
Confidence            678899999999999999999999   9999999753 57899999999997321  01133555543   579999999


Q ss_pred             HHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccC--CcCCCCCcceEEEeeCchhhhhhhcC-Cccc
Q 037144          254 PLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPH--KWLFTTLDCCCLWVKDPSCLLSTLST-NPQY  330 (502)
Q Consensus       254 eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~h--K~l~~p~~~g~~~~r~~~~l~~~~~~-~~~y  330 (502)
                      +|+++|++||+++++|+||+.+... +. +. +......|..++++|  |++..+ ..|++++.++......... ....
T Consensus       139 ~i~~l~~~~~~~lI~D~a~a~g~~~-~~-~~-~g~~~~~d~~~~S~~~~K~~~~~-~GG~v~~~~~~~~~~~~~~~~~g~  214 (380)
T TIGR03588       139 AIAALAKKHGLKIIEDASHALGAEY-GG-KP-VGNCRYADATVFSFHPVKIITTA-EGGAVTTNDEELAERMRLLRSHGI  214 (380)
T ss_pred             HHHHHHHHcCCEEEEECCCcccCcc-CC-Ee-CCCccccceEEEecCCCCccccc-CceEEEECCHHHHHHHHHHHHCCC
Confidence            9999999999999999999876542 11 11 111124599999988  888765 4555666665443221100 0000


Q ss_pred             ccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCC----
Q 037144          331 LKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRN----  406 (502)
Q Consensus       331 l~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~----  406 (502)
                      ................+....+...-+...+.  +++-....+.+.++.++..++++++.+.|..+|++++..++.    
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~--aa~g~~qL~~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~  292 (380)
T TIGR03588       215 TKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQ--AALGLSQLKKLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKS  292 (380)
T ss_pred             CCCcccccccccCcceeeeeccccccCccHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEe
Confidence            00000000000000000000011111222222  222222245678899999999999999999998877553321    


Q ss_pred             -eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEE---Eeee----E----C-----
Q 037144          407 -FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFM---THAI----V----G-----  469 (502)
Q Consensus       407 -~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~---~~~~----~----~-----  469 (502)
                       ...+.+.+....                          .....++.+.|.++|+...   .+..    +    .     
T Consensus       293 ~~~~~~i~~~~~~--------------------------~~~r~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p  346 (380)
T TIGR03588       293 AWHLYPILLDQEF--------------------------GCTRKEVFEALRAAGIGVQVHYIPVHLQPYYRQGFGDGDLP  346 (380)
T ss_pred             EEEEEEEEECCcC--------------------------CCCHHHHHHHHHHCCCCcccCCcccccChhhhccCCcCCCc
Confidence             112233332110                          0013456666766676321   1100    0    0     


Q ss_pred             -----CEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144          470 -----GIYVLRFAAGNSMTMESHVRAAWTVVQEH  498 (502)
Q Consensus       470 -----g~~~lR~~~~~~~t~~~di~~~~~~l~~~  498 (502)
                           ....+++.+ ++..+++||+++++.|+++
T Consensus       347 ~a~~~~~~~l~lP~-~~~l~~~dv~~i~~~l~~~  379 (380)
T TIGR03588       347 SAENFYLAEISLPL-HPALTLEQQQRVVETLRKV  379 (380)
T ss_pred             HHHHHHhceEEcCC-CCCCCHHHHHHHHHHHHHh
Confidence                 014677765 5667788999999999875

This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.

>PRK05968 hypothetical protein; Provisional

Probab=99.81  E-value=1.4e-17  Score=169.70  Aligned_cols=231  Identities=15%  Similarity=0.203  Sum_probs=160.1

Q ss_pred             ChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh---
Q 037144          111 SPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA---  187 (502)
Q Consensus       111 ~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s---  187 (502)
                      .|...++|+    .+++++|.+.         .+++++|+.|+..++.+...           +++.|+++...|.+   
T Consensus        62 ~p~~~~le~----~lA~l~g~~~---------av~~~sG~~Ai~~al~al~~-----------~Gd~Vl~~~~~y~~t~~  117 (389)
T PRK05968         62 NPTVRAFEE----MLAKLEGAED---------ARGFASGMAAISSTVLSFVE-----------PGDRIVAVRHVYPDAFR  117 (389)
T ss_pred             ChhHHHHHH----HHHHHhCCCc---------EEEECCHHHHHHHHHHHHhC-----------CCCEEEEeCCCchHHHH
Confidence            444455554    4778888753         46667888888777654322           67778888877765   


Q ss_pred             -HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEE
Q 037144          188 -FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWV  266 (502)
Q Consensus       188 -~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~l  266 (502)
                       +.+.+...|+   +++.++.+       |+++|++++ +.+      .+|++..++++++.+.|+++|+++|+++|+++
T Consensus       118 ~~~~~~~~~G~---~v~~vd~~-------d~~~l~~~i-~~t------klV~ie~pt~~~~~~~dl~~i~~la~~~gi~v  180 (389)
T PRK05968        118 LFETILKRMGV---EVDYVDGR-------DEEAVAKAL-PGA------KLLYLESPTSWVFELQDVAALAALAKRHGVVT  180 (389)
T ss_pred             HHHHHHHHcCc---eEEEeCCC-------CHHHHHHhc-ccC------CEEEEECCCCCCCcHHHHHHHHHHHHHcCCEE
Confidence             3356677898   88888642       789999887 322      27888889999999999999999999999999


Q ss_pred             EeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCcccc
Q 037144          267 HVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQE  344 (502)
Q Consensus       267 hVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~  344 (502)
                      +||++|+.+...-+ ..      .++|.++.++||++++|.+  .|+++ .++..+.........++..           
T Consensus       181 ivD~a~a~~~~~~p-~~------~g~Divv~S~tK~l~g~~~~~gG~i~-~~~~~~~~l~~~~~~~~g~-----------  241 (389)
T PRK05968        181 MIDNSWASPVFQRP-IT------LGVDLVIHSASKYLGGHSDTVAGVVA-GSKEHIARINAEAYPYLGA-----------  241 (389)
T ss_pred             EEECCCcchhccCc-hh------cCCcEEEeeccccccCCCCeEEEEEE-ECHHHHHHHHHHHHHhCCC-----------
Confidence            99999976643222 11      1689999999999998755  45544 4444332221111111110           


Q ss_pred             cCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC------------CeeEEEE
Q 037144          345 VGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR------------NFSLVCF  412 (502)
Q Consensus       345 ~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~------------~~~~v~f  412 (502)
                                  ....+..|..++  +.+.+..++++..++++++.+.|+++|+++.+..|            ..++++|
T Consensus       242 ------------~~~~~~A~~~l~--~L~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf  307 (389)
T PRK05968        242 ------------KLSPFEAWLLLR--GLRTLPLRMKAHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSF  307 (389)
T ss_pred             ------------CCChHHHHHHHc--ccCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEE
Confidence                        113455555544  44667889999999999999999999998766533            1358888


Q ss_pred             Eee
Q 037144          413 RVT  415 (502)
Q Consensus       413 ~~~  415 (502)
                      .+.
T Consensus       308 ~~~  310 (389)
T PRK05968        308 IFR  310 (389)
T ss_pred             EEC
Confidence            875

>PRK03158 histidinol-phosphate aminotransferase; Provisional

Probab=99.80  E-value=2.6e-17  Score=166.69  Aligned_cols=306  Identities=12%  Similarity=0.088  Sum_probs=195.9

Q ss_pred             HHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccC
Q 037144           93 VGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGREN  172 (502)
Q Consensus        93 ~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~  172 (502)
                      +.+.+...++..  .|...++..+++    +++++.+|.+.+       ..++|+|+++++...+.+..+          
T Consensus        47 v~~a~~~~~~~~--~~~p~~g~~~lr----~~ia~~~~~~~~-------~i~~t~G~~~~l~~~~~~~~~----------  103 (359)
T PRK03158         47 VKEAIAAHLDEL--ALYPDGYAPELR----TKVAKHLGVDEE-------QLLFGAGLDEVIQMISRALLN----------  103 (359)
T ss_pred             HHHHHHHHHHHh--hcCCCCcHHHHH----HHHHHHhCCCHH-------HEEECCCHHHHHHHHHHHHhC----------
Confidence            445544444321  222233444455    445556677543       588999998887655444322          


Q ss_pred             CCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCCh
Q 037144          173 ISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPL  252 (502)
Q Consensus       173 ~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl  252 (502)
                       +++.|+++.+++..+...+...|.   +++.+|++   ++.+|++++++++++.+      .+|+++.++|+||.+-|.
T Consensus       104 -~gd~v~~~~p~y~~~~~~~~~~g~---~~~~~~~~---~~~~d~~~l~~~~~~~~------~~v~i~~p~NPtG~~~~~  170 (359)
T PRK03158        104 -PGTNTVMAEPTFSQYRHNAIIEGA---EVREVPLK---DGGHDLEAMLKAIDEQT------KIVWICNPNNPTGTYVNH  170 (359)
T ss_pred             -CCCEEEEcCCCHHHHHHHHHHcCC---eEEEEecC---CCCcCHHHHHHhcCCCC------CEEEEeCCCCCCCCCCCH
Confidence             567888888899899899999999   99999987   35799999998875433      367778999999999999


Q ss_pred             hHHHHHHHH--hCCEEEeecccccccccCc--cchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCC
Q 037144          253 KPLCDVAKQ--FGIWVHVDAAYAGSACICP--EFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTN  327 (502)
Q Consensus       253 ~eI~~i~~~--~g~~lhVDaA~g~~~~~~~--~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~  327 (502)
                      ++|.++++.  +|+++++|.+|..+.....  .....+... .-..+..++.|.++.| ..+|+++.. +..+. .+...
T Consensus       171 ~~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~-~~vi~~~S~SK~~g~~GlRiG~~v~~-~~~~~-~~~~~  247 (359)
T PRK03158        171 EELLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKY-ENLIVLRTFSKAYGLAALRVGYGIAS-EELIE-KLNIA  247 (359)
T ss_pred             HHHHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHHhc-CCEEEEEechHhhcCcchhhehhcCC-HHHHH-HHHHh
Confidence            999999987  5999999999976543211  111111111 2235556899999744 556877653 33322 22111


Q ss_pred             cccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCC
Q 037144          328 PQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG-VANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRN  406 (502)
Q Consensus       328 ~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~  406 (502)
                      ...                   +      ....+...++...+. .+..++..+...+.++++.+.|++. ++.+. ++.
T Consensus       248 ~~~-------------------~------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~-~~~  300 (359)
T PRK03158        248 RPP-------------------F------NTTRIAQYAAIAALEDQAFLKECVEKNAEGLEQYYAFCKEY-GLFYY-PSQ  300 (359)
T ss_pred             cCC-------------------C------CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeeC-CCc
Confidence            000                   0      013334444444442 3445666666777888888888887 77765 455


Q ss_pred             eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHH
Q 037144          407 FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMES  486 (502)
Q Consensus       407 ~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~  486 (502)
                      .+.+++... ..                             ..++.+.+.+.|..+.++..+....++|++++    +.+
T Consensus       301 g~~i~~~~~-~~-----------------------------~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~----~~~  346 (359)
T PRK03158        301 TNFIFVDTG-RD-----------------------------ANELFEALLKKGYIVRSGAALGFPTGVRITIG----LKE  346 (359)
T ss_pred             CcEEEEECC-CC-----------------------------HHHHHHHHHHCCeEEeeCCCCCCCCeEEEecC----CHH
Confidence            555444432 11                             23566777777876555444444679999976    566


Q ss_pred             HHHHHHHHHHHH
Q 037144          487 HVRAAWTVVQEH  498 (502)
Q Consensus       487 di~~~~~~l~~~  498 (502)
                      ++++++++|+++
T Consensus       347 ~~~~l~~al~~~  358 (359)
T PRK03158        347 QNDKIIELLKEL  358 (359)
T ss_pred             HHHHHHHHHHHh
Confidence            999999999875

>PRK15029 arginine decarboxylase; Provisional

Probab=99.80  E-value=5.1e-17  Score=174.06  Aligned_cols=175  Identities=14%  Similarity=0.120  Sum_probs=140.4

Q ss_pred             HHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCC
Q 037144          120 IVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDR  199 (502)
Q Consensus       120 ~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~  199 (502)
                      +..+..+++||.+.++        ++++|+|.+|..++.++..           +++.|+++..+|-|+..++.+.|+  
T Consensus       209 eAq~~aA~~fgA~~t~--------FlvNGST~gn~a~i~a~~~-----------~gd~Vlv~RN~HKSv~~al~L~ga--  267 (755)
T PRK15029        209 ESEKYAARVFGADRSW--------SVVVGTSGSNRTIMQACMT-----------DNDVVVVDRNCHKSIEQGLILTGA--  267 (755)
T ss_pred             HHHHHHHHHhCCCcEE--------EEeCChhHHHHHHHHHhcC-----------CCCEEEeecccHHHHHHHHHHcCC--
Confidence            3457789999998764        7889999999877666654           788999999999999999999999  


Q ss_pred             CCEEEEecCCCC---CcccC-----HHHHHHHHHHHH----hcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEE
Q 037144          200 KNIRAIKTTKSS---SYGLS-----AESVLSQINLDV----EAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVH  267 (502)
Q Consensus       200 ~~v~~v~~~~~~---~~~~d-----~~~Le~~i~~~~----~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lh  267 (502)
                       .+++++....+   .+.++     ++.++++|++..    +.+.+|.+|++|.+| ..|.+-++++|+++|+++|+.||
T Consensus       268 -~Pvyl~P~~~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PT-Y~Gv~~di~~I~~~~h~~~~~ll  345 (755)
T PRK15029        268 -KPVYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCT-YDGVCYNAKEAQDLLEKTSDRLH  345 (755)
T ss_pred             -eEEEecccccccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCC-CcceeeCHHHHHHHHHhcCCeEE
Confidence             99999754321   13455     999999997643    134577788888865 88999999999999999999999


Q ss_pred             eecccccccccCccchh--hhc----CCCCCC-eeEEccCCcCCCCCcceEEEeeCc
Q 037144          268 VDAAYAGSACICPEFRH--FID----GVECVD-SFSFNPHKWLFTTLDCCCLWVKDP  317 (502)
Q Consensus       268 VDaA~g~~~~~~~~~~~--~~~----~~~~aD-si~~~~hK~l~~p~~~g~~~~r~~  317 (502)
                      ||.|||+.+.+.|.+..  .+.    .-.++| .++-|.||++.+-..++++.+++.
T Consensus       346 vDEAhGah~~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~  402 (755)
T PRK15029        346 FDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREG  402 (755)
T ss_pred             EECccccccccCccccccccccccccccCCCceEEEEchhhcccchhhhhhheeCCC
Confidence            99999998877776542  121    114788 889999999998888999998765

>PRK06767 methionine gamma-lyase; Provisional

Probab=99.80  E-value=1.3e-17  Score=170.05  Aligned_cols=233  Identities=13%  Similarity=0.137  Sum_probs=158.4

Q ss_pred             cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144          110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ  189 (502)
Q Consensus       110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~  189 (502)
                      ..|...++|+.    +++++|.+         ..+++++|+.|+..++.+...           +++.|+++...|.+..
T Consensus        59 ~~pt~~~Le~~----lA~l~G~~---------~al~~~sG~~Ai~~~l~al~~-----------~Gd~Vv~~~~~y~~~~  114 (386)
T PRK06767         59 GNPTVKLFEER----MAVLEGGE---------EALAFGSGMAAISATLIGFLK-----------AGDHIICSNGLYGCTY  114 (386)
T ss_pred             CCcchHHHHHH----HHHHhCCC---------cEEEECCHHHHHHHHHHHHhC-----------CCCEEEEcCCcHHHHH
Confidence            45666666655    77888864         357778888887666554432           6778888888776554


Q ss_pred             HHH----HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144          190 KAA----QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW  265 (502)
Q Consensus       190 ~aa----~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~  265 (502)
                      ...    ...|+   ++..++.       .|++++++++++.+      .+|+++.++|++|.+-|+++|.++|+++|++
T Consensus       115 ~~~~~~~~~~gi---~~~~~~~-------~d~~~l~~~i~~~t------klV~lesp~NptG~v~dl~~I~~la~~~g~~  178 (386)
T PRK06767        115 GFLEVLEEKFMI---THSFCDM-------ETEADIENKIRPNT------KLIFVETPINPTMKLIDLKQVIRVAKRNGLL  178 (386)
T ss_pred             HHHHHHHhhcCe---EEEEeCC-------CCHHHHHHhhCcCc------eEEEEeCCCCCCceecCHHHHHHHHHHcCCE
Confidence            443    33455   5544432       37899999886543      3888899999999999999999999999999


Q ss_pred             EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCccc
Q 037144          266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQ  343 (502)
Q Consensus       266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~  343 (502)
                      ++||+||+.+....| ..      .++|+++.+++|+++++..  .|+++.++. .+..........+.           
T Consensus       179 vivD~a~a~~~~~~p-l~------~g~Div~~S~sK~l~g~g~~~gG~v~~~~~-~i~~~~~~~~~~~g-----------  239 (386)
T PRK06767        179 VIVDNTFCSPYLQRP-LE------LGCDAVVHSATKYIGGHGDVVAGVTICKTR-ALAEKIRPMRKDIG-----------  239 (386)
T ss_pred             EEEECCCcccccCCc-hh------cCCcEEEecCcceecCCCCceeEEEEeChH-HHHHHHHHHHHHhC-----------
Confidence            999999975443322 11      2789999999999987755  466665543 22221111000010           


Q ss_pred             ccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-----------CeeEEEE
Q 037144          344 EVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR-----------NFSLVCF  412 (502)
Q Consensus       344 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~-----------~~~~v~f  412 (502)
                                  ....++..|+.++.  .+.+..++++..++++++.+.|+++|+++.+.-|           ..++|+|
T Consensus       240 ------------~~~~~~~a~l~~~~--L~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf  305 (386)
T PRK06767        240 ------------GIMAPFDAWLLLRG--LKTLAVRMDRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISF  305 (386)
T ss_pred             ------------CCCCHHHHHHHHcC--CCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEE
Confidence                        01133445655544  3456678899999999999999999999865422           2468899


Q ss_pred             Eee
Q 037144          413 RVT  415 (502)
Q Consensus       413 ~~~  415 (502)
                      .+.
T Consensus       306 ~l~  308 (386)
T PRK06767        306 SIK  308 (386)
T ss_pred             EEc
Confidence            875

>PRK15481 transcriptional regulatory protein PtsJ; Provisional

Probab=99.80  E-value=3.5e-17  Score=169.76  Aligned_cols=303  Identities=12%  Similarity=0.053  Sum_probs=198.5

Q ss_pred             ccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCch
Q 037144          107 DWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHC  186 (502)
Q Consensus       107 ~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~  186 (502)
                      .|....+..++.+.+.+|+...++.++        ..++|+|+++++..++.+..+           +++.|++..+++.
T Consensus       116 ~Y~~~~g~~~lr~~ia~~~~~~~~~~~--------~Iiit~G~~~al~~~~~~l~~-----------pgd~Vlv~~P~y~  176 (431)
T PRK15481        116 LYGDAPVSPELHAWAARWLRDDCPVAF--------EIDLTSGAIDAIERLLCAHLL-----------PGDSVAVEDPCFL  176 (431)
T ss_pred             hcCCcCCCHHHHHHHHHHHhhccCCcC--------eEEEecCcHHHHHHHHHHhCC-----------CCCEEEEeCCCcH
Confidence            354444556777777788776443222        589999999988777665543           6788889999999


Q ss_pred             hHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEe-cCCccccccCChh---HHHHHHHHh
Q 037144          187 AFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCAT-VGTTAITAVDPLK---PLCDVAKQF  262 (502)
Q Consensus       187 s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t-~gtt~~G~idpl~---eI~~i~~~~  262 (502)
                      .+...++..|+   +++.||++++   .+|+++|++++++.+      .+++++ .++|+||.+-+.+   +|.++|+++
T Consensus       177 ~~~~~~~~~g~---~~~~v~~~~~---g~~~~~l~~~~~~~~------k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~  244 (431)
T PRK15481        177 SSINMLRYAGF---SASPVSVDAE---GMQPEKLERALAQGA------RAVILTPRAHNPTGCSLSARRAAALRNLLARY  244 (431)
T ss_pred             HHHHHHHHcCC---eEEeeccCCC---CCCHHHHHHHHhcCC------CEEEECCCCCCCCCccCCHHHHHHHHHHHHhc
Confidence            99999999999   9999999742   489999999986532      255555 8999999997765   999999999


Q ss_pred             -CCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCc
Q 037144          263 -GIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPK  341 (502)
Q Consensus       263 -g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~  341 (502)
                       ++|+++|.+|+.....  .....+.....--.+..+++|.++....+|+++. ++... ..+.....+...        
T Consensus       245 ~~~~ii~De~Y~~~~~~--~~~~~~~~~~~~vi~~~SfSK~~~~GlRiG~~i~-~~~~~-~~~~~~~~~~~~--------  312 (431)
T PRK15481        245 PQVLVIIDDHFALLSSS--PYHSVIPQTTQRWALIRSVSKALGPDLRLAFVAS-DSATS-ARLRLRLNSGTQ--------  312 (431)
T ss_pred             CCceEEecCchhhhccC--CCCCCCcCCCCCEEEEeeeccccCCCceeEEEeC-CHHHH-HHHHHHHhcccc--------
Confidence             9999999999765421  1111111111112456679999996667787665 33332 222111011000        


Q ss_pred             ccccCCCcccccCCCCCCchHHHHHHHHh--c--HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecC
Q 037144          342 EQEVGYKDWQITLCRRFRSLKLWVVIRNF--G--VANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPS  417 (502)
Q Consensus       342 ~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g--~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~  417 (502)
                                     ....+..+++...+  |  .+.+.+..+.+.+.++.+.+.|++. ++++..+.....+++.++..
T Consensus       313 ---------------~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~-~~~~~~p~gg~f~~~~l~~~  376 (431)
T PRK15481        313 ---------------WVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQY-GIAIPSPGDGLNLWLPLDTD  376 (431)
T ss_pred             ---------------CCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCeEEEEEECCCC
Confidence                           01223334444443  2  1235677788888899999999887 67654344444444444211


Q ss_pred             cchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC---CEEEEEEEecCCCCcHHHHHHHHHH
Q 037144          418 AVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG---GIYVLRFAAGNSMTMESHVRAAWTV  494 (502)
Q Consensus       418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~---g~~~lR~~~~~~~t~~~di~~~~~~  494 (502)
                                                    ..++.+.+.+.|..+.++..+.   +..++|++++..  ++++++++++.
T Consensus       377 ------------------------------~~~~~~~l~~~gV~v~pg~~f~~~~~~~~iRis~~~~--~~~~i~~~~~~  424 (431)
T PRK15481        377 ------------------------------SQATALTLAKSGWLVREGEAFGVSAPSHGLRITLSTL--NDAEINRLAAD  424 (431)
T ss_pred             ------------------------------HHHHHHHHHHCCcEEecCCccccCCCCCeEEEEcCCC--ChHHHHHHHHH
Confidence                                          2345666667788766554442   135899999753  46799999999


Q ss_pred             HHHHHH
Q 037144          495 VQEHLE  500 (502)
Q Consensus       495 l~~~~~  500 (502)
                      |.++..
T Consensus       425 l~~~~~  430 (431)
T PRK15481        425 LHQALN  430 (431)
T ss_pred             HHHHhc
Confidence            988754

>PRK01688 histidinol-phosphate aminotransferase; Provisional

Probab=99.80  E-value=5.6e-18  Score=170.82  Aligned_cols=283  Identities=12%  Similarity=0.124  Sum_probs=190.3

Q ss_pred             HHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCC-eEEEeCCCCchhHHHHHHHcCC
Q 037144          119 NIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISK-LVVYSSDQTHCAFQKAAQIVGI  197 (502)
Q Consensus       119 ~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~-~~v~~s~~~H~s~~~aa~~~Gl  197 (502)
                      .++.+++++.+|++.+       ..++|+|+++++..++.+...           ++ +.|+++.++|..+...++..|+
T Consensus        60 ~~l~~~~a~~~g~~~~-------~I~~~~Gs~e~i~~~~~~~~~-----------~g~~~vli~~P~y~~y~~~~~~~G~  121 (351)
T PRK01688         60 KAVIENYAAYAGVKPE-------QVLVSRGADEGIELLIRAFCE-----------PGKDAILYCPPTYGMYSVSAETIGV  121 (351)
T ss_pred             HHHHHHHHHHhCCCHH-------HEEEcCCHHHHHHHHHHHhcC-----------CCCCEEEEcCCCHHHHHHHHHHcCC
Confidence            4677889999999765       689999999988766655432           33 6788888999999999999999


Q ss_pred             CCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh--CCEEEeecccccc
Q 037144          198 DRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF--GIWVHVDAAYAGS  275 (502)
Q Consensus       198 g~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~--g~~lhVDaA~g~~  275 (502)
                         +++.+|.++  ++.+|++++++++ +.+      .+|+++.++|+||.+-+.++|.++++..  +.++++|.||..+
T Consensus       122 ---~~~~v~~~~--~~~~d~~~l~~~~-~~~------~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~~f  189 (351)
T PRK01688        122 ---EIRTVPTLD--NWQLDLPAIADNL-DGV------KVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEF  189 (351)
T ss_pred             ---EEEEeecCC--CCCCCHHHHHHhc-cCC------cEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhc
Confidence               999999874  4799999999887 232      3788889999999999888877776542  6899999999665


Q ss_pred             cccCccchhhhcCCCCCC-eeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCccccc
Q 037144          276 ACICPEFRHFIDGVECVD-SFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQIT  353 (502)
Q Consensus       276 ~~~~~~~~~~~~~~~~aD-si~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~  353 (502)
                      ... +.....+..  ... .+.-+++|+++.| ..+|+++. ++..+........+|-                      
T Consensus       190 ~~~-~s~~~~~~~--~~n~iv~rSfSK~~glaGlRiGy~i~-~~~~i~~l~~~~~~~~----------------------  243 (351)
T PRK01688        190 CPQ-ASLAGWLAE--YPHLVILRTLSKAFALAGLRCGFTLA-NEEVINLLLKVIAPYP----------------------  243 (351)
T ss_pred             CCC-CChHHHHhh--CCCEEEEecchHhhcCHHHHHhHHhC-CHHHHHHHHhccCCCC----------------------
Confidence            311 111122211  112 4556799988744 45677765 3333322111111110                      


Q ss_pred             CCCCCCchHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCC
Q 037144          354 LCRRFRSLKLWVVIRNF---GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNG  430 (502)
Q Consensus       354 ~sr~~~al~~~~~l~~~---g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~  430 (502)
                      .    ..+...++...+   +.+.+.+.++...+.++++.+.|+++++++.+.++..+.+.+++.+              
T Consensus       244 v----~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ps~~nfi~~~~~~--------------  305 (351)
T PRK01688        244 L----STPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALKEIPCVEQVFDSETNYILARFTA--------------  305 (351)
T ss_pred             C----CHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcCC--------------
Confidence            0    111122222232   2356677778888889999999999888764556666666665531              


Q ss_pred             CcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeE-CCEEEEEEEecCCCCcHHHHHHHHHHHH
Q 037144          431 TYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIV-GGIYVLRFAAGNSMTMESHVRAAWTVVQ  496 (502)
Q Consensus       431 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~-~g~~~lR~~~~~~~t~~~di~~~~~~l~  496 (502)
                                       ..++.+.|.++|.++..+... +...++|+++.    +.+++++++++|+
T Consensus       306 -----------------~~~l~~~L~~~gi~vr~~~~~~~~~~~iRis~~----~~~e~~~l~~al~  351 (351)
T PRK01688        306 -----------------SSAVFKSLWDQGIILRDQNKQPGLSNCLRITIG----TREECQRVIDALR  351 (351)
T ss_pred             -----------------HHHHHHHHHHCCeEEEECCCcCCCCCeEEEeCC----CHHHHHHHHHhhC
Confidence                             245677777788765544333 22468999986    4579999998873

>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed

Probab=99.80  E-value=2.6e-17  Score=168.06  Aligned_cols=220  Identities=12%  Similarity=0.160  Sum_probs=154.6

Q ss_pred             cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144          110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ  189 (502)
Q Consensus       110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~  189 (502)
                      ..|...++|+.    +++++|.+.         ..++++|+.++..++.+...           +++.|+++...|.+..
T Consensus        63 ~~p~~~~Le~~----lA~l~G~~~---------~~~~~sG~~Ai~~~l~~~l~-----------~Gd~Vl~~~~~y~~~~  118 (398)
T PRK07504         63 SNPTVDMFEKR----MCALEGAED---------ARATASGMAAVTAAILCQVK-----------AGDHVVAARALFGSCR  118 (398)
T ss_pred             CCchHHHHHHH----HHHHhCCCe---------eeEecCHHHHHHHHHHHHhC-----------CCCEEEEcCCchhHHH
Confidence            34555666654    778888865         35677888888766654322           6778888887776533


Q ss_pred             ----HHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144          190 ----KAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW  265 (502)
Q Consensus       190 ----~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~  265 (502)
                          ..+...|+   +++.++       .+|+++++++|++++      .+|+++.++|++|.+-|+++|.++|+++|++
T Consensus       119 ~~~~~~~~~~G~---~v~~vd-------~~d~e~l~~ai~~~t------klV~lesp~NptG~v~dl~~I~~la~~~gi~  182 (398)
T PRK07504        119 YVVETLLPRYGI---ESTLVD-------GLDLDNWEKAVRPNT------KVFFLESPTNPTLEVIDIAAVAKIANQAGAK  182 (398)
T ss_pred             HHHHHHHhhcCe---EEEEEC-------CCCHHHHHHhcCcCc------eEEEEECCCCCCcEecCHHHHHHHHHHcCCE
Confidence                33455687   777774       368999999987654      3899999999999999999999999999999


Q ss_pred             EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-cceEEEeeCchhhhhhhcCCcccccCccCCCCCcccc
Q 037144          266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-DCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQE  344 (502)
Q Consensus       266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~  344 (502)
                      ++||++|+.+....+.  ..     ++|.++.++||+++++. ..|.+++.++..+...+.   .++..           
T Consensus       183 lvvD~a~a~~~~~~~~--~~-----gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~---~~~~~-----------  241 (398)
T PRK07504        183 LVVDNVFATPLFQKPL--EL-----GAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQ---DYFRH-----------  241 (398)
T ss_pred             EEEECCccccccCCch--hh-----CCCEEEeeccccccCCccceEEEEEeCcHHHHHHHH---HHHHH-----------
Confidence            9999999765443221  11     78999999999998764 345445544443322110   11111           


Q ss_pred             cCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 037144          345 VGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEV  401 (502)
Q Consensus       345 ~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l  401 (502)
                               .+.......+|.+++  |.+.+..++++..+++.++.+.|++.|+++-
T Consensus       242 ---------~g~~~s~~~A~~~l~--~L~tl~~R~~~~~~na~~la~~L~~~p~v~~  287 (398)
T PRK07504        242 ---------TGPSLSPFNAWTLLK--GLETLPVRVRQQTESAAAIADFLAGHPKVAR  287 (398)
T ss_pred             ---------hCCCCCHHHHHHHHh--ccchHHHHHHHHHHHHHHHHHHHHcCCCccE
Confidence                     111234566666665  4567888999999999999999999998763

>PRK08133 O-succinylhomoserine sulfhydrylase; Validated

Probab=99.80  E-value=3e-17  Score=167.26  Aligned_cols=220  Identities=15%  Similarity=0.193  Sum_probs=156.0

Q ss_pred             cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144          110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ  189 (502)
Q Consensus       110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~  189 (502)
                      ..|...++|    +.+++++|.+         ..++++||++|+..++.+...           +++.|+++...|.+..
T Consensus        59 ~~p~~~~le----~~la~l~g~~---------~~v~~ssG~~Ai~~al~al~~-----------~Gd~Vi~~~~~y~~t~  114 (390)
T PRK08133         59 TNPTVTMFQ----ERLAALEGAE---------ACVATASGMAAILAVVMALLQ-----------AGDHVVSSRSLFGSTV  114 (390)
T ss_pred             CChHHHHHH----HHHHHHhCCC---------cEEEECCHHHHHHHHHHHHhC-----------CCCEEEEccCcchhHH
Confidence            344444444    5577888865         368899999999877765532           5778888888876533


Q ss_pred             ----HHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144          190 ----KAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW  265 (502)
Q Consensus       190 ----~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~  265 (502)
                          +.+...|+   +++.++++       |+++++++|++.+      .+|+++.++|++|.+.|+++|+++|+++|++
T Consensus       115 ~~~~~~~~~~G~---~v~~vd~~-------d~~~l~~~i~~~t------klV~ie~p~NptG~v~dl~~I~~la~~~gi~  178 (390)
T PRK08133        115 SLFEKIFARFGI---ETTFVDLT-------DLDAWRAAVRPNT------KLFFLETPSNPLTELADIAALAEIAHAAGAL  178 (390)
T ss_pred             HHHHHHHHHcCc---EEEEECCC-------CHHHHHHhcCcCC------eEEEEECCCCCCCCcCCHHHHHHHHHHcCCE
Confidence                45567888   88888763       7889999887644      3788889999999999999999999999999


Q ss_pred             EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc-ceEEEeeCchhhhhhhcCCcccccCccCCCCCcccc
Q 037144          266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD-CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQE  344 (502)
Q Consensus       266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~-~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~  344 (502)
                      +++|++|+.+....| . .     .++|.++.++||+++++.. .|.+++.++..+....    .++..           
T Consensus       179 livD~t~~~~~~~~p-l-~-----~g~Divv~S~sK~~~g~g~~~GG~vv~~~~~~~~~~----~~~~~-----------  236 (390)
T PRK08133        179 LVVDNCFCTPALQQP-L-K-----LGADVVIHSATKYLDGQGRVLGGAVVGSKELMEEVF----GFLRT-----------  236 (390)
T ss_pred             EEEECCCcccccCCc-h-h-----hCCcEEEeecceeecCCcceEeEEEEcCHHHHHHHH----HHHHH-----------
Confidence            999999876544322 1 1     1689999999999986643 4444444443322111    11111           


Q ss_pred             cCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144          345 VGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA  402 (502)
Q Consensus       345 ~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~  402 (502)
                               .+.....+..|..++  |.+.+..++++..+++..+.+.|++.|+++-+
T Consensus       237 ---------~g~~~~~~~a~~~l~--gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v  283 (390)
T PRK08133        237 ---------AGPTLSPFNAWVFLK--GLETLSLRMEAHSANALALAEWLEAHPGVERV  283 (390)
T ss_pred             ---------hCCCCCHHHHHHHHc--ccchHHHHHHHHHHHHHHHHHHHHhCCCeeEE
Confidence                     011123445666554  55678889999999999999999999988754

>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.80  E-value=4.7e-17  Score=167.17  Aligned_cols=241  Identities=13%  Similarity=0.118  Sum_probs=160.0

Q ss_pred             cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144          110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ  189 (502)
Q Consensus       110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~  189 (502)
                      .+|...++|+.    ++++.|...         .++|++||+|+.+++.+...           +++.|+++...|.+..
T Consensus        62 ~~p~~~~le~~----lA~l~g~~~---------av~~sSGt~Al~~al~~ll~-----------~Gd~Vi~~~~~y~~t~  117 (433)
T PRK08134         62 SNPTVAVLEER----VAALEGGVG---------AIATASGQAALHLAIATLMG-----------AGSHIVASSALYGGSH  117 (433)
T ss_pred             cChHHHHHHHH----HHHHhCCCc---------EEEeCCHHHHHHHHHHHHhC-----------CCCEEEEeCCccHHHH
Confidence            45666666655    677777643         58899999999877765522           5778889988887654


Q ss_pred             HHH----HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144          190 KAA----QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW  265 (502)
Q Consensus       190 ~aa----~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~  265 (502)
                      ...    ...|+   +++.++++       |+++|+++|+++++      +|++.++++++|.+.|+++|+++|+++|++
T Consensus       118 ~~~~~~l~~~Gi---~v~~vd~~-------d~~~l~~~i~~~Tk------lV~~e~~~np~g~v~Di~~I~~la~~~gi~  181 (433)
T PRK08134        118 NLLHYTLRRFGI---ETTFVKPG-------DIDGWRAAIRPNTR------LLFGETLGNPGLEVLDIPTVAAIAHEAGVP  181 (433)
T ss_pred             HHHHHHHhhCCe---EEEEECCC-------CHHHHHHhcCCCCe------EEEEECCCcccCcccCHHHHHHHHHHcCCE
Confidence            443    44788   88888763       78999999987654      788888999999999999999999999999


Q ss_pred             EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc-ceEEEeeCchhh-hh--hh-cCCcccccCccCCCCC
Q 037144          266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD-CCCLWVKDPSCL-LS--TL-STNPQYLKNEATDQEP  340 (502)
Q Consensus       266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~-~g~~~~r~~~~l-~~--~~-~~~~~yl~~~~~~~~~  340 (502)
                      ++||++++.+....| . ..     ++|.++.+.|||++.+.. .|.+++...... ..  .+ ...+.........   
T Consensus       182 livD~t~a~~~~~~p-l-~~-----GaD~vv~S~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~---  251 (433)
T PRK08134        182 LLVDSTFTTPYLLRP-F-EH-----GADLVYHSATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPYAGFHGMV---  251 (433)
T ss_pred             EEEECCCcccccCCc-h-hc-----CCCEEEeccccccCCCCCceEEEEEecCccccccccccccccCCcccccccc---
Confidence            999999987765433 2 11     899999999999987643 455555322110 00  00 0000000000000   


Q ss_pred             cccccCCCc--------ccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144          341 KEQEVGYKD--------WQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA  402 (502)
Q Consensus       341 ~~~~~~~~~--------~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~  402 (502)
                      .........        .....+....+..+|..++  |.+.+..++++..+++..+.+.|+++|.++-+
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~G~~ls~~~A~l~~~--gL~tl~~R~~~~~~nA~~la~~L~~~p~V~~V  319 (433)
T PRK08134        252 FAEESTVAAFLLRARREGLRDFGACLSPMNAWQLLQ--GIETLPLRMERHVANTRKVVAFLASHPAVARV  319 (433)
T ss_pred             hhhccchhHHHHHHHHHHHHhcCCCCCHHHHHHHhc--CCCcHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence            000000000        0011122234455565554  66778999999999999999999999987644

>PRK05166 histidinol-phosphate aminotransferase; Provisional

Probab=99.80  E-value=4.3e-17  Score=165.78  Aligned_cols=289  Identities=11%  Similarity=0.083  Sum_probs=189.7

Q ss_pred             HHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCC
Q 037144          120 IVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDR  199 (502)
Q Consensus       120 ~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~  199 (502)
                      .+++++++++|++.+       ..++|+|+++++...+.+...           +++.|++....|..+...++..|+  
T Consensus        75 ~lr~~ia~~~~~~~~-------~i~~t~G~~~~l~~~~~~~~~-----------~gd~vli~~P~y~~~~~~~~~~g~--  134 (371)
T PRK05166         75 ALREAIAARTGVPAD-------RIILGNGSEDLIAVICRAVLR-----------PGDRVVTLYPSFPLHEDYPTMMGA--  134 (371)
T ss_pred             HHHHHHHHHhCcCHH-------HEEEcCCHHHHHHHHHHHhcC-----------CCCEEEEcCCChHHHHHHHHHcCC--
Confidence            355667778888654       689999998887655544322           677888888899888889999999  


Q ss_pred             CCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHH--hCCEEEeecccccccc
Q 037144          200 KNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQ--FGIWVHVDAAYAGSAC  277 (502)
Q Consensus       200 ~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~--~g~~lhVDaA~g~~~~  277 (502)
                       +++.+|++.  ++.+|+++|++++++.++      +|+++.++|+||.+-|.+++.++++.  .++++++|.+|+.+..
T Consensus       135 -~~~~v~~~~--~~~~~~~~l~~~~~~~~~------~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y~~~~~  205 (371)
T PRK05166        135 -RVERVTVTP--DLGFDLDALCAAVARAPR------MLMFSNPSNPVGSWLTADQLARVLDATPPETLIVVDEAYAEYAA  205 (371)
T ss_pred             -eEEEeecCC--CCCCCHHHHHHhhhcCCC------EEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECcHHHhcC
Confidence             999999875  468999999998866432      67789999999999988777777764  4789999999976552


Q ss_pred             cCccchhhhcCCC-CC--CeeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCccccc
Q 037144          278 ICPEFRHFIDGVE-CV--DSFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQIT  353 (502)
Q Consensus       278 ~~~~~~~~~~~~~-~a--Dsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~  353 (502)
                       .......+..+. .-  -.+..++.|.++ .....|++++.++.... .+.....+..                     
T Consensus       206 -~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~~~l~~-~~~~~~~~~~---------------------  262 (371)
T PRK05166        206 -GDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSDPELVG-LLDRVRTPFN---------------------  262 (371)
T ss_pred             -CcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCCHHHHH-HHHHhccCCC---------------------
Confidence             111111111111 11  245667999997 55667887766554432 2211110000                     


Q ss_pred             CCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCc
Q 037144          354 LCRRFRSLKLWVVIRNF-GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTY  432 (502)
Q Consensus       354 ~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~  432 (502)
                          ...+...+++..+ ..+.+++.++...+.++++.+.|++. ++.+. ++..+.+.+.....               
T Consensus       263 ----~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~-p~~g~fl~~~~~~~---------------  321 (371)
T PRK05166        263 ----VNGAAQAAALAALDDEEHLAKGVALALAERERLKKELAEM-GYRIA-PSRANFLFFDARRP---------------  321 (371)
T ss_pred             ----CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-cCeeC-CCcCCEEEEeCCCC---------------
Confidence                0222222333332 23557777788888889999999987 77753 55555544432211               


Q ss_pred             ccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144          433 DQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       433 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~  500 (502)
                                     ..++.+.+.++|..+.++.......++|++++    +.++.+++.++|+++.+
T Consensus       322 ---------------~~~l~~~l~~~gi~v~p~~~~~~~~~iRi~~~----~~~~~~~l~~~l~~i~~  370 (371)
T PRK05166        322 ---------------ASAVAEALLRQGVIVKPWKQPGFETFIRVSIG----SPEENDHFVAALDKVLE  370 (371)
T ss_pred             ---------------HHHHHHHHHHCCeEEecCCCCCCCCeEEEEcC----CHHHHHHHHHHHHHHhh
Confidence                           24567777777865444332234679999987    34578888888877653

>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase

Probab=99.79  E-value=9.7e-17  Score=164.49  Aligned_cols=326  Identities=13%  Similarity=0.083  Sum_probs=205.0

Q ss_pred             HHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCC-CcEEEcCCchHHHHHHHHHHHHHHHHH
Q 037144           89 VAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGN-GGGVIQGTTCEALLCTLTAARDRVLKK  167 (502)
Q Consensus        89 ~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~-~~g~~t~ggt~a~~~al~~a~~~~~~~  167 (502)
                      +|..+.+.+...+. ....|....+..++.+.+.+|+.+.+|.+...   .. ...++|+|+++++..++.+..+     
T Consensus        42 ~~~~~~~a~~~~~~-~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~---~~~~~i~it~Ga~~al~~~~~~l~~-----  112 (393)
T TIGR03538        42 TPAFVLEALRENLH-GLSTYPTTKGLPELRQAIARWLERRFDLPTGV---DPERHVLPVNGTREALFAFAQAVIN-----  112 (393)
T ss_pred             CCHHHHHHHHHHhh-ccCCCCCCCCCHHHHHHHHHHHHHhhCCcccC---CCCceEEECCCcHHHHHHHHHHHcC-----
Confidence            45556666665543 23456655667889999999999988875211   01 1478899999988776665443     


Q ss_pred             hCccCCCCe--EEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcc
Q 037144          168 IGRENISKL--VVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTA  245 (502)
Q Consensus       168 ~~~~~~~~~--~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~  245 (502)
                            +++  .|+++.+.+..+...++..|+   +++.+|+++++++.+|+++|++++.+++      .+|+++.++|+
T Consensus       113 ------~gd~~~vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~~~~~~------k~i~l~~p~NP  177 (393)
T TIGR03538       113 ------PGQAPLVVMPNPFYQIYEGAALLAGA---EPYFLNCTAENGFLPDFDAVPESVWRRC------QLLFVCSPGNP  177 (393)
T ss_pred             ------CCCcceEEecCCCCcchHHHHHhcCC---eEEEeeccccCCCCCCHHHHHHHHhhcc------eEEEEeCCCCC
Confidence                  343  478888888888888999999   9999999755457899999999886543      36777899999


Q ss_pred             ccccCC---hhHHHHHHHHhCCEEEeecccccccccCc-cchh---hhcCCC--CCC--eeEEccCCc-CCCCCcceEEE
Q 037144          246 ITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICP-EFRH---FIDGVE--CVD--SFSFNPHKW-LFTTLDCCCLW  313 (502)
Q Consensus       246 ~G~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~-~~~~---~~~~~~--~aD--si~~~~hK~-l~~p~~~g~~~  313 (502)
                      ||.+-+   +++|+++|++||+++++|.+|........ ....   ......  ..+  .++.++.|. +.....+|+++
T Consensus       178 tG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~GlRvG~~i  257 (393)
T TIGR03538       178 TGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPGLRSGFVA  257 (393)
T ss_pred             cCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcCCcccceEEEe
Confidence            999855   88899999999999999999976543210 0000   011110  111  556779995 45667788876


Q ss_pred             eeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHH
Q 037144          314 VKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG-VANLRNFIRSHVGMAKLFERL  392 (502)
Q Consensus       314 ~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~la~~l~~~  392 (502)
                      .. +..+.. +.....+...                       ...++..++++..+. .+.+++..+.+.+.++.+.+.
T Consensus       258 ~~-~~l~~~-~~~~~~~~~~-----------------------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  312 (393)
T TIGR03538       258 GD-AEILKA-FLRYRTYHGC-----------------------AMPIPTQLASIAAWNDEQHVRENRALYREKFAAVLEI  312 (393)
T ss_pred             cC-HHHHHH-HHHHHHhhcc-----------------------CcCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHH
Confidence            53 333222 2111111100                       012233333344332 345666777778888888888


Q ss_pred             HhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh-cCcEEEEeeeEC--
Q 037144          393 VTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV-SGKVFMTHAIVG--  469 (502)
Q Consensus       393 l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--  469 (502)
                      |++.  +.+. .|..+.+.|.-.+..                             ..++.+++.+ .|..+.++..+.  
T Consensus       313 L~~~--~~~~-~p~gg~f~~~~~~~~-----------------------------~~~~~~~l~~~~gV~v~pg~~f~~~  360 (393)
T TIGR03538       313 LGQV--LDLE-LPDAGFYLWPKVPGD-----------------------------DEAFARALYEEENVTVLPGRFLARE  360 (393)
T ss_pred             HHhh--Cccc-CCCeeEEEEEECCCC-----------------------------HHHHHHHHHHHCCEEEeCCcccccc
Confidence            8764  3333 344444444332211                             1345666544 476554443321  


Q ss_pred             ------CEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144          470 ------GIYVLRFAAGNSMTMESHVRAAWTVVQEH  498 (502)
Q Consensus       470 ------g~~~lR~~~~~~~t~~~di~~~~~~l~~~  498 (502)
                            +..++|++++.   ++++++.+++.|.+.
T Consensus       361 ~~~~~~~~~~~Ris~~~---~~~~l~~~l~~l~~~  392 (393)
T TIGR03538       361 AEGVNPGEGRVRIALVA---PLEECVEAAERIRSF  392 (393)
T ss_pred             ccCCCCCCCEEEEEecC---CHHHHHHHHHHHHHh
Confidence                  24689999874   467899999888764

This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).

>PLN03026 histidinol-phosphate aminotransferase; Provisional

Probab=99.79  E-value=6.3e-17  Score=164.88  Aligned_cols=287  Identities=13%  Similarity=0.059  Sum_probs=190.7

Q ss_pred             HHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCC
Q 037144          120 IVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDR  199 (502)
Q Consensus       120 ~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~  199 (502)
                      ++++++++.+|++.+       ..++|+|+++++..++.+..+           +++.|+++.+.+..+...++..|+  
T Consensus        90 ~lr~~ia~~~~~~~~-------~I~~t~Ga~~~i~~~~~~~~~-----------~gd~Vlv~~P~y~~y~~~~~~~g~--  149 (380)
T PLN03026         90 RLRAALAEDSGLESE-------NILVGCGADELIDLLMRCVLD-----------PGDKIIDCPPTFGMYVFDAAVNGA--  149 (380)
T ss_pred             HHHHHHHHHhCcChh-------hEEEcCCHHHHHHHHHHHhcC-----------CCCEEEEcCCChHHHHHHHHHcCC--
Confidence            355667777887654       588999999988766554432           567888888888878888899999  


Q ss_pred             CCEEEEecCCCCCcccCHHHHHHHHH-HHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccccccccc
Q 037144          200 KNIRAIKTTKSSSYGLSAESVLSQIN-LDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACI  278 (502)
Q Consensus       200 ~~v~~v~~~~~~~~~~d~~~Le~~i~-~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~  278 (502)
                       +++.+|.+.  ++.+|+++|++++. +.      +.+|+++.++|+||.+-|.+++.++++.. +|+++|.+|..+...
T Consensus       150 -~~~~v~~~~--~~~~d~~~l~~~~~~~~------~~~v~l~~P~NPTG~~~~~~~l~~l~~~~-~~vi~DeaY~~~~~~  219 (380)
T PLN03026        150 -EVIKVPRTP--DFSLDVPRIVEAVETHK------PKLLFLTSPNNPDGSIISDDDLLKILELP-ILVVLDEAYIEFSTQ  219 (380)
T ss_pred             -EEEEeecCC--CCCcCHHHHHHHHhccC------CcEEEEeCCCCCCCCCCCHHHHHHHHhcC-CEEEEECcchhhcCC
Confidence             999999864  57899999999883 33      23788889999999999999999999865 999999999654321


Q ss_pred             CccchhhhcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCC
Q 037144          279 CPEFRHFIDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRR  357 (502)
Q Consensus       279 ~~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~  357 (502)
                       ......+... .-..+..+++|.++ .....|+++. ++..+.........|-                          
T Consensus       220 -~~~~~~~~~~-~~viv~~SfSK~~glaGlRiGy~~~-~~~~i~~l~~~~~~~~--------------------------  270 (380)
T PLN03026        220 -ESRMKWVKKY-DNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQPYN--------------------------  270 (380)
T ss_pred             -cchHHHHHhC-CCEEEEecchHhhcCccccceeeec-CHHHHHHHHHhcCCCC--------------------------
Confidence             1111111110 12356678999997 4556777765 3333322111111110                          


Q ss_pred             CCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCccccc
Q 037144          358 FRSLKLWVVIRNF-GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYR  436 (502)
Q Consensus       358 ~~al~~~~~l~~~-g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~  436 (502)
                      ...+...++...+ ..+.+++..++..+.++++.+.|++++++++ .++..+.+.+.+.+. .                 
T Consensus       271 ~~~~~q~aa~~aL~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~~-~-----------------  331 (380)
T PLN03026        271 VSVAAEVAACAALSNPKYLEDVKNALVEERERLFGLLKEVPFLEP-YPSDANFILCRVTSG-R-----------------  331 (380)
T ss_pred             CCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHCCCCeE-CCCCCeEEEEECCCC-C-----------------
Confidence            1223333334333 2345677778888889999999998865654 356666666665421 0                 


Q ss_pred             ccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144          437 QFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEH  498 (502)
Q Consensus       437 ~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~  498 (502)
                              +  ..++.+.|.++|..+.......+..++|++++    +.+++++++++|+++
T Consensus       332 --------~--~~~~~~~l~~~gI~v~~~~~~~~~~~lRis~~----~~~~~~~l~~al~~~  379 (380)
T PLN03026        332 --------D--AKKLKEDLAKMGVMVRHYNSKELKGYIRVSVG----KPEHTDALMEALKQL  379 (380)
T ss_pred             --------C--HHHHHHHHHHCCeEEEECCCCCCCCEEEEecC----CHHHHHHHHHHHHHh
Confidence                    0  23567777777875443332334569999986    456899999998764

>PLN02271 serine hydroxymethyltransferase

Probab=99.79  E-value=4.3e-17  Score=166.63  Aligned_cols=301  Identities=11%  Similarity=0.053  Sum_probs=187.5

Q ss_pred             cccCCCCCCHHHHHHHHHHhhc-CCCCccc------ccChhhHHHHHHHHHHHHHhcCCCCc-cCcCCCCcE-EEcCCch
Q 037144           80 FAYFPATSSVAGIVGEMLSSGF-NVVGLDW------ISSPAAVELENIVMDWLGQMLDLPKS-FLFSGNGGG-VIQGTTC  150 (502)
Q Consensus        80 ~~~~~~~~~~~~~~~~~l~~~~-n~~~~~~------~~~p~~~~le~~~~~~l~~l~g~~~~-~~~~~~~~g-~~t~ggt  150 (502)
                      +..+++-+.+...+.+.+.+.+ |.+.-+|      .......++|..+++...++||++.. |      +. +-.-+|+
T Consensus       151 l~LIASEN~~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~~------gaNVQp~SGs  224 (586)
T PLN02271        151 IELIASENFVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAFGLDSEKW------GVNVQPYSCT  224 (586)
T ss_pred             eeeccccccCCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCccccc------ccceeeccHH
Confidence            3344444433444444444433 4333332      34445678999999999999998752 2      22 3334889


Q ss_pred             HHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCC---CchhHH------HHHHHcCCCCCCEEEEe--cCCCCCcccCHHH
Q 037144          151 EALLCTLTAARDRVLKKIGRENISKLVVYSSDQ---THCAFQ------KAAQIVGIDRKNIRAIK--TTKSSSYGLSAES  219 (502)
Q Consensus       151 ~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~---~H~s~~------~aa~~~Glg~~~v~~v~--~~~~~~~~~d~~~  219 (502)
                      .||+.++.+...           |++.|+..+.   +|.+.-      +.+...|+   .+..+|  +++ .++.+|.++
T Consensus       225 ~AN~aV~~ALl~-----------PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~---~~~~vpY~~d~-~~g~IDyd~  289 (586)
T PLN02271        225 SANFAVYTGLLL-----------PGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASI---FFESLPYKVNP-QTGYIDYDK  289 (586)
T ss_pred             HHHHHHHHHhcC-----------CCCEEEEecCCCCCchhcccccccccccccccc---eEEEEEccccc-ccCccCHHH
Confidence            999877766543           7788887544   455543      23455676   666666  543 357999999


Q ss_pred             HHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcc
Q 037144          220 VLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNP  299 (502)
Q Consensus       220 Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~  299 (502)
                      |++.....     +|.+|++.+..++  ..-|+++|+++|+++|++++||+||..+.+....+...   +..+|+++.+.
T Consensus       290 lek~a~~~-----rPKLII~g~Sayp--r~~D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP---~~~aDvvt~TT  359 (586)
T PLN02271        290 LEEKALDF-----RPKILICGGSSYP--REWDYARFRQIADKCGAVLMCDMAHISGLVAAKECVNP---FDYCDIVTSTT  359 (586)
T ss_pred             HHHHhhhc-----CCeEEEECchhcc--CcCCHHHHHHHHHHcCCEEEEECcccccccccCcCCCC---CcCCcEEEeCC
Confidence            99855332     2567777554444  67899999999999999999999999988765543222   23799999999


Q ss_pred             CCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCC-CCCcccccCCC-cccccCCCCCC-chHHHHHHHHhcHHHHH
Q 037144          300 HKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATD-QEPKEQEVGYK-DWQITLCRRFR-SLKLWVVIRNFGVANLR  376 (502)
Q Consensus       300 hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~-~~~~~~~~~~~-~~~~~~sr~~~-al~~~~~l~~~g~~g~~  376 (502)
                      ||||.+|.| |++++++...  .....  ......... .+.....++.. -.+++++-... ..++..+++......+.
T Consensus       360 HKtLrGPrG-G~I~~r~~~~--~~~~g--~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~efk  434 (586)
T PLN02271        360 HKSLRGPRG-GIIFYRKGPK--LRKQG--MLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYK  434 (586)
T ss_pred             cccCCCCCc-eEEEeccccc--ccccC--CccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChHHH
Confidence            999999998 8888765421  00000  000000000 00000001110 01344443322 24555667665566778


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCeEEecC-CCeeEEEEEeecC
Q 037144          377 NFIRSHVGMAKLFERLVTSDKRFEVAFP-RNFSLVCFRVTPS  417 (502)
Q Consensus       377 ~~~~~~~~la~~l~~~l~~~~~~~l~~~-~~~~~v~f~~~~~  417 (502)
                      +..++..++|+.|.+.|.+. |++++.. .+..+|.+.+.+.
T Consensus       435 ~Ya~QVv~NAkaLA~~L~~~-G~~vv~ggTdnHlvLvDl~~~  475 (586)
T PLN02271        435 AYMQQVKKNAQALASALLRR-KCRLVTGGTDNHLLLWDLTTL  475 (586)
T ss_pred             HHHHHHHHHHHHHHHHHHHC-CCeEeeCCCCcceeeecCccc
Confidence            99999999999999999887 8999853 2345666665543

>PRK03317 histidinol-phosphate aminotransferase; Provisional

Probab=99.79  E-value=1.6e-16  Score=161.40  Aligned_cols=316  Identities=13%  Similarity=0.034  Sum_probs=204.9

Q ss_pred             HHHHHHHHHHhhcCC---CCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHH
Q 037144           89 VAGIVGEMLSSGFNV---VGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVL  165 (502)
Q Consensus        89 ~~~~~~~~l~~~~n~---~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~  165 (502)
                      +|..+.+.+...+..   ....|. .++...+.+.+.+|+.+.+|.+-..     ...++|+|+++++...+.+..+   
T Consensus        40 ~~~~~~~al~~~l~~~~~~~~~Y~-~~g~~~lr~aia~~~~~~~~~~~~~-----~~I~it~G~~~~l~~~~~~~~~---  110 (368)
T PRK03317         40 PSPALVADIAEAVAEAAAGLNRYP-DRDAVALRADLAAYLTAQTGVGLTV-----ENVWAANGSNEILQQLLQAFGG---  110 (368)
T ss_pred             CCHHHHHHHHHHHhhhhhhhccCC-CCchHHHHHHHHHHhhhhccCCCCh-----hhEEECCCHHHHHHHHHHHhcC---
Confidence            344455555444321   223443 3466789999999999988764221     2688999999888776665543   


Q ss_pred             HHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcc
Q 037144          166 KKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTA  245 (502)
Q Consensus       166 ~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~  245 (502)
                              +++.|++..+++..+..+++..|+   +++.++.+.  ++.+|+++|++++++..     +.+|+++.++|+
T Consensus       111 --------~gd~v~v~~P~y~~~~~~~~~~g~---~~~~~~~~~--~~~~d~~~l~~~~~~~~-----~~~i~l~~p~NP  172 (368)
T PRK03317        111 --------PGRTALGFVPSYSMHPIIARGTHT---EWVEGPRAA--DFTLDVDAAVAAIAEHR-----PDVVFLTSPNNP  172 (368)
T ss_pred             --------CCCEEEEeCCChHHHHHHHHhcCC---eeEEcccCC--CCCCCHHHHHHHHhccC-----CCEEEEeCCCCC
Confidence                    677788888899889899998888   888887653  46899999999986421     226777889999


Q ss_pred             ccccCChhHHHHHHHHhCCEEEeecccccccccC-ccchhhhcCCCCCCe-eEEccCCcCCC-CCcceEEEeeCchhhhh
Q 037144          246 ITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIC-PEFRHFIDGVECVDS-FSFNPHKWLFT-TLDCCCLWVKDPSCLLS  322 (502)
Q Consensus       246 ~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~-~~~~~~~~~~~~aDs-i~~~~hK~l~~-p~~~g~~~~r~~~~l~~  322 (502)
                      ||.+-+.+++.++|+.+++++++|.+|+.+.... +........  .-+. ++.++.|.++. ...+|+++. ++... +
T Consensus       173 tG~~~~~~~l~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~--~~~~i~~~SfSK~~g~~GlRiG~~~~-~~~~~-~  248 (368)
T PRK03317        173 TGTALPLDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLLPE--YPRLVVSRTMSKAFAFAGGRLGYLAA-APAVV-D  248 (368)
T ss_pred             CCCCCCHHHHHHHHHHCCceEEEeCCchhhcccCCcCHHHHHHh--CCCEEEEEechhhhccchhhhhhhhC-CHHHH-H
Confidence            9999999999999999999999999998653211 111111111  1244 44579999974 456677765 33332 2


Q ss_pred             hhcC-CcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 037144          323 TLST-NPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG-VANLRNFIRSHVGMAKLFERLVTSDKRFE  400 (502)
Q Consensus       323 ~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~~~~  400 (502)
                      .+.. ...|-                          ..++...++...+. .+.+.+.+++..+.++++.+.|++. |++
T Consensus       249 ~l~~~~~~~~--------------------------~s~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~  301 (368)
T PRK03317        249 ALRLVRLPYH--------------------------LSAVTQAAARAALRHADELLASVAALRAERDRVVAWLREL-GLR  301 (368)
T ss_pred             HHHhcCCCCC--------------------------CCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHC-CCE
Confidence            2221 10110                          01233333333331 2345556667778888888999887 787


Q ss_pred             EecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecC
Q 037144          401 VAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGN  480 (502)
Q Consensus       401 l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~  480 (502)
                      +. ++..+++.|...+.                              ...+.+.+.++|..+. +.  ....++|++++ 
T Consensus       302 ~~-~~~~~~~~~~~~~~------------------------------~~~~~~~l~~~Gv~v~-~~--~~~~~iRi~~~-  346 (368)
T PRK03317        302 VA-PSDANFVLFGRFAD------------------------------RHAVWQGLLDRGVLIR-DV--GIPGWLRVTIG-  346 (368)
T ss_pred             eC-CCCCcEEEEeccCC------------------------------HHHHHHHHHHCCEEEE-eC--CCCCeEEEecC-
Confidence            65 55566655522111                              2356677777786543 32  23468999975 


Q ss_pred             CCCcHHHHHHHHHHHHHHHH
Q 037144          481 SMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       481 ~~t~~~di~~~~~~l~~~~~  500 (502)
                         +.+++++++++|+++.+
T Consensus       347 ---~~~~~~~~~~~l~~~~~  363 (368)
T PRK03317        347 ---TPEENDAFLAALAEVLA  363 (368)
T ss_pred             ---CHHHHHHHHHHHHHHHH
Confidence               45689999999988764

>PLN02509 cystathionine beta-lyase

Probab=99.79  E-value=3.5e-17  Score=168.47  Aligned_cols=216  Identities=14%  Similarity=0.192  Sum_probs=153.6

Q ss_pred             HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHH----HH
Q 037144          117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQK----AA  192 (502)
Q Consensus       117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~----aa  192 (502)
                      ..+++.++++++.|.+         ..++++||+.++ .++.....           +++.|+++...|.+..+    .+
T Consensus       134 t~~aLE~~lA~leg~e---------~ai~~~SG~aAi-~~il~ll~-----------~GD~VI~~~~~y~~t~~ll~~~l  192 (464)
T PLN02509        134 TRDALESLLAKLDKAD---------RAFCFTSGMAAL-SAVTHLIK-----------NGEEIVAGDDVYGGSDRLLSQVV  192 (464)
T ss_pred             HHHHHHHHHHHHhCCC---------EEEEeCcHHHHH-HHHHHHhC-----------CCCEEEEcCCchhhHHHHHHHHH
Confidence            4556667788888754         356667777654 33333221           67888899889877653    34


Q ss_pred             HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccc
Q 037144          193 QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAY  272 (502)
Q Consensus       193 ~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~  272 (502)
                      ...|+   +++.++.       .|+++++++|++++      .+|+++.++|++|.+.||++|+++|+++|++++||+||
T Consensus       193 ~~~G~---~v~~vd~-------~d~e~l~~ai~~~T------klV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~  256 (464)
T PLN02509        193 PRSGV---VVKRVNT-------TNLDEVAAAIGPQT------KLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSI  256 (464)
T ss_pred             HHCCe---EEEEeCC-------CCHHHHHHhCCcCC------eEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCc
Confidence            56688   7877753       37889999886544      38899999999999999999999999999999999999


Q ss_pred             ccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcc
Q 037144          273 AGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDW  350 (502)
Q Consensus       273 g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~  350 (502)
                      +.+....+ ..      .++|.++++++||++++.+  .|+++++++.......     .+...                
T Consensus       257 a~~~~~~p-l~------~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~-----~~~~~----------------  308 (464)
T PLN02509        257 MSPVLSRP-LE------LGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVY-----FLQNS----------------  308 (464)
T ss_pred             cccccCCh-hh------cCCcEEEecCcccccCCCccceeEEEeccHHHHHHHH-----HHHHh----------------
Confidence            77654322 11      2799999999999998776  6777766654322110     01000                


Q ss_pred             cccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144          351 QITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA  402 (502)
Q Consensus       351 ~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~  402 (502)
                         .+....+..+|..++  |.+-+..++++..++++++.+.|+++|.++-+
T Consensus       309 ---~g~~l~p~~A~l~lr--~L~tL~~R~~r~~~nA~~la~~L~~~p~V~~V  355 (464)
T PLN02509        309 ---EGSGLAPFDCWLCLR--GIKTMALRIEKQQENARKIAMYLSSHPRVKKV  355 (464)
T ss_pred             ---cCCCcCHHHHHHHHh--hhhhHHHHHHHHHHHHHHHHHHHhcCCCccEE
Confidence               011124455666665  45778889999999999999999999988643

>PLN02242 methionine gamma-lyase

Probab=99.79  E-value=7.9e-17  Score=165.09  Aligned_cols=224  Identities=13%  Similarity=0.115  Sum_probs=152.5

Q ss_pred             cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144          110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ  189 (502)
Q Consensus       110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~  189 (502)
                      ..|...++|+.    +++++|.+.         .++++||++|+..++.+...           +++.|+++...+....
T Consensus        74 ~~Pt~~~LE~~----lA~l~g~~~---------~l~~~sG~~Ai~~al~al~~-----------~GD~Vl~~~~~Y~~~~  129 (418)
T PLN02242         74 FNPTVLNLGRQ----MAALEGTEA---------AYCTASGMSAISSVLLQLCS-----------SGGHVVASNTLYGGTH  129 (418)
T ss_pred             CChhHHHHHHH----HHHHhCCCe---------EEEEccHHHHHHHHHHHHhC-----------CCCEEEEcCCcHHHHH
Confidence            45666666655    778888753         57899999999888776643           6778888887776555


Q ss_pred             HHH-----HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCC
Q 037144          190 KAA-----QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGI  264 (502)
Q Consensus       190 ~aa-----~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~  264 (502)
                      ..+     +..|+   +++.++.       .|+++|+++|++.     ++.+|+++.++|++|.+.|+++|+++|+++|+
T Consensus       130 ~~~~~~~~~~~G~---~~~~~d~-------~d~e~l~~~i~~~-----~tklV~lesp~NPtG~v~dl~~I~~la~~~gi  194 (418)
T PLN02242        130 ALLAHFLPRKCNI---TTTFVDI-------TDLEAVKKAVVPG-----KTKVLYFESISNPTLTVADIPELARIAHEKGV  194 (418)
T ss_pred             HHHHHhhhhccCc---eEEEcCC-------CCHHHHHHhcCcC-----CCEEEEEecCCCCCCcccCHHHHHHHHHHhCC
Confidence            443     34666   6666653       2889999988652     13488899999999999999999999999999


Q ss_pred             EEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcc-eEEEeeCchhhhhhhcCCcc-cccCccCCCCCcc
Q 037144          265 WVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDC-CCLWVKDPSCLLSTLSTNPQ-YLKNEATDQEPKE  342 (502)
Q Consensus       265 ~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~-g~~~~r~~~~l~~~~~~~~~-yl~~~~~~~~~~~  342 (502)
                      +++||.+|+.+. ..+  ...     ++|+++.+++|+++++... |.+++.++..+......... +..          
T Consensus       195 ~livDea~~~~~-~~~--~~~-----g~divv~S~SK~l~g~g~~~gG~iv~~~~li~~l~~~~~~~~~~----------  256 (418)
T PLN02242        195 TVVVDNTFAPMV-LSP--ARL-----GADVVVHSISKFISGGADIIAGAVCGPAELVNSMMDLHHGALML----------  256 (418)
T ss_pred             EEEEECCCCccC-CCH--HHc-----CCcEEEEeCccccCCCCCceEEEEEcCHHHHHHHHHHhhhhhhc----------
Confidence            999999996432 211  111     5899999999999877543 33344444433322111100 000          


Q ss_pred             cccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC
Q 037144          343 QEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP  404 (502)
Q Consensus       343 ~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~  404 (502)
                                 .+....+..+|..+  .+...+..+++++.++++++.+.|+++ ++++..|
T Consensus       257 -----------~g~~~~~~~A~l~~--~~l~tl~~r~~~~~~~a~~la~~L~~~-~~~V~yP  304 (418)
T PLN02242        257 -----------LGPTMNPKVAFELS--ERLPHLSLRMKEHCRRAMEYAKRMKEL-GLKVIYP  304 (418)
T ss_pred             -----------cCCCCCHHHHHHHH--cCCCcHHHHHHHHHHHHHHHHHHHHhC-CCEEECC
Confidence                       01112333444444  355577788899999999999999998 5777643

>PRK09148 aminotransferase; Validated

Probab=99.79  E-value=1.2e-16  Score=164.17  Aligned_cols=330  Identities=12%  Similarity=0.049  Sum_probs=203.6

Q ss_pred             HHHHHHhhcC-CCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCcc
Q 037144           93 VGEMLSSGFN-VVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRE  171 (502)
Q Consensus        93 ~~~~l~~~~n-~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~  171 (502)
                      +.+.+...++ .....|....+..++.+.+.+|+.+.+|.+-..    ....++|+|+++++..++.+..+         
T Consensus        48 ~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~----~~~I~it~G~~~al~~~~~~l~~---------  114 (405)
T PRK09148         48 IVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNP----DTQVVATLGSKEGFANMAQAITA---------  114 (405)
T ss_pred             HHHHHHHHHcCcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCcEEEcCChHHHHHHHHHHhcC---------
Confidence            3333444443 223456665667889999999999888864211    01589999999988776655433         


Q ss_pred             CCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC
Q 037144          172 NISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP  251 (502)
Q Consensus       172 ~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp  251 (502)
                        +++.|+++.++|..+...+...|+   +++.+|++.++.   ++++++++++...   .++.+|+.+.++|+||.+-+
T Consensus       115 --~gd~Vl~~~P~y~~~~~~~~~~g~---~v~~v~~~~~~~---~~~~l~~~~~~~~---~~~~~v~l~~P~NPtG~~~s  183 (405)
T PRK09148        115 --PGDVILCPNPSYPIHAFGFIMAGG---VIRSVPAEPDEE---FFPALERAVRHSI---PKPIALIVNYPSNPTAYVAD  183 (405)
T ss_pred             --CCCEEEEcCCCCcccHHHHHhcCC---EEEEEeCCCCCC---CccCHHHHHhhcc---ccceEEEEeCCCCCCCcCCC
Confidence              677888899999888888899999   999999975433   3455666554321   12458888999999999976


Q ss_pred             h---hHHHHHHHHhCCEEEeecccccccccCccchhh--hcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhc
Q 037144          252 L---KPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF--IDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLS  325 (502)
Q Consensus       252 l---~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~  325 (502)
                      .   ++|.++|++||+++++|.+|+...+........  +.+......+..+++|.++.| ..+|+++. ++..+. .+.
T Consensus       184 ~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v~-~~~~i~-~l~  261 (405)
T PRK09148        184 LDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAVG-NERLIA-ALT  261 (405)
T ss_pred             HHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcchheeeeeC-CHHHHH-HHH
Confidence            5   678889999999999999997654321111111  111112224467899999744 56777764 443332 222


Q ss_pred             CCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q 037144          326 TNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAF  403 (502)
Q Consensus       326 ~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~  403 (502)
                      ....++...                       ...+...++...+  +.+.+++..+.+.++++++.+.|++. ++.+. 
T Consensus       262 ~~~~~~~~~-----------------------~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~-  316 (405)
T PRK09148        262 RVKSYLDYG-----------------------AFTPIQVAATAALNGPQDCIAEMRELYKKRRDVLVESFGRA-GWDIP-  316 (405)
T ss_pred             HHHHHhccC-----------------------CChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHc-CCccC-
Confidence            111111100                       0122222333333  34556677778888899999999886 67654 


Q ss_pred             CCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeEC--CEEEEEEEecC
Q 037144          404 PRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVG--GIYVLRFAAGN  480 (502)
Q Consensus       404 ~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lR~~~~~  480 (502)
                      +|..+++.|.-.+....                    ..  +  ..++.+.+. +.|..+.++..+.  +..++|+++. 
T Consensus       317 ~p~~g~f~~~~l~~~~~--------------------~~--~--~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~-  371 (405)
T PRK09148        317 PPAASMFAWAPIPEAFR--------------------HL--G--SLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIALV-  371 (405)
T ss_pred             CCCeeEEEEEECCCccC--------------------CC--C--HHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec-
Confidence            45555444433232110                    00  0  134555554 4576555544443  2479999986 


Q ss_pred             CCCcHHHHHHHHHHHHHHHH
Q 037144          481 SMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       481 ~~t~~~di~~~~~~l~~~~~  500 (502)
                        .+.++++++++.|.++..
T Consensus       372 --~~~~~l~~al~~l~~~l~  389 (405)
T PRK09148        372 --ENEQRIRQAARNIKRFLS  389 (405)
T ss_pred             --CCHHHHHHHHHHHHHHHH
Confidence              356788888888877654

>PRK08175 aminotransferase; Validated

Probab=99.79  E-value=3.9e-16  Score=160.11  Aligned_cols=318  Identities=14%  Similarity=0.094  Sum_probs=199.7

Q ss_pred             CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCC
Q 037144          105 GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQT  184 (502)
Q Consensus       105 ~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~  184 (502)
                      ...|....+..++++.+.+|+.+.+|.+-..    ....++|+|+++++...+....+           +++.|+++.+.
T Consensus        60 ~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~----~~~i~~t~G~~~~l~~~~~~~~~-----------~gd~Vlv~~P~  124 (395)
T PRK08175         60 THGYSTSRGIPRLRRAISRWYQDRYDVDIDP----ESEAIVTIGSKEGLAHLMLATLD-----------HGDTVLVPNPS  124 (395)
T ss_pred             cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCcEEEccCcHHHHHHHHHHhCC-----------CCCEEEEcCCC
Confidence            4456666677899999999999887864221    01478899988887654443322           67789999999


Q ss_pred             chhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCCh---hHHHHHHHH
Q 037144          185 HCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPL---KPLCDVAKQ  261 (502)
Q Consensus       185 H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl---~eI~~i~~~  261 (502)
                      |..+...++..|+   +++.+|++++   ..++++|++++++..   ..+.+|+++.++|+||.+-+.   ++|+++|++
T Consensus       125 y~~~~~~~~~~g~---~~~~v~~~~~---~~~~~~l~~~l~~~~---~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~  195 (395)
T PRK08175        125 YPIHIYGAVIAGA---QVRSVPLVEG---VDFFNELERAIRESY---PKPKMMILGFPSNPTAQCVELEFFEKVVALAKR  195 (395)
T ss_pred             CcchHHHHHHcCC---eEEEEecccC---CCcHHHHHHHHhhcc---CCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHH
Confidence            9888888889999   9999999753   345889998886421   123477778889999998666   799999999


Q ss_pred             hCCEEEeecccccccccCccchhhhcCCCC-CC--eeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCcccccCccCC
Q 037144          262 FGIWVHVDAAYAGSACICPEFRHFIDGVEC-VD--SFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQYLKNEATD  337 (502)
Q Consensus       262 ~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~-aD--si~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~  337 (502)
                      ||+++++|.+|+.......... .+..+.. .|  .++.++.|.++.| ..+|+++. ++.... .+.....+....   
T Consensus       196 ~~i~ii~De~y~~l~~~~~~~~-~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~-~~~l~~-~~~~~~~~~~~~---  269 (395)
T PRK08175        196 YDVLVVHDLAYADIVYDGWKAP-SIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVG-NPELVS-ALARIKSYHDYG---  269 (395)
T ss_pred             cCcEEEEecchHhhccCCCCCc-chhcCCCcccCEEEEeeccccccCcchhheeeeC-CHHHHH-HHHHHHhhcccC---
Confidence            9999999999976543111111 1111111 23  4567899999755 44676654 444332 221111111000   


Q ss_pred             CCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEee
Q 037144          338 QEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVT  415 (502)
Q Consensus       338 ~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~  415 (502)
                                       .   ......++...+  ....+++..+++.+.++++.+.|++. ++.+..+.....++++++
T Consensus       270 -----------------~---~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~p~~g~~i~i~l~  328 (395)
T PRK08175        270 -----------------T---FTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHEA-GWMVEMPKASMYVWAKIP  328 (395)
T ss_pred             -----------------C---CcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHc-CCcccCCCEEEEEEEECC
Confidence                             0   111112222222  24456677777888889999999887 676653334445555554


Q ss_pred             cCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeEC--CEEEEEEEecCCCCcHHHHHHHH
Q 037144          416 PSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVG--GIYVLRFAAGNSMTMESHVRAAW  492 (502)
Q Consensus       416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lR~~~~~~~t~~~di~~~~  492 (502)
                      +. ..                    ..  +  ..++.+++. +.|..+.++..+.  +..++|++++   .+++.+..++
T Consensus       329 ~~-~~--------------------~~--~--~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~~---~~~~~~~~al  380 (395)
T PRK08175        329 EP-YA--------------------AM--G--SLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALI---ENRDRIRQAI  380 (395)
T ss_pred             cc-cC--------------------CC--C--HHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEeC---CCHHHHHHHH
Confidence            31 00                    00  0  235566555 4576544443332  3468999985   3567899999


Q ss_pred             HHHHHHHHh
Q 037144          493 TVVQEHLEA  501 (502)
Q Consensus       493 ~~l~~~~~~  501 (502)
                      +.|.++.++
T Consensus       381 ~~l~~~l~~  389 (395)
T PRK08175        381 RGIKAMFRA  389 (395)
T ss_pred             HHHHHHHHh
Confidence            999887764

>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family

Probab=99.79  E-value=1.1e-16  Score=160.23  Aligned_cols=331  Identities=16%  Similarity=0.052  Sum_probs=191.8

Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCcccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCcc
Q 037144           56 VETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSF  135 (502)
Q Consensus        56 ~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~  135 (502)
                      .+..++.+++.+..+-... --.|+|.-.. +.......+.+..+    +       +...+++++.+.+++++|.+.+ 
T Consensus         7 ~~~~~~~~~~~~~~~~~~~-~~~ylgl~~~-~~~~~~~~~~~~~~----~-------g~~~~~~~Le~~lA~~~g~~~e-   72 (346)
T TIGR03576         7 REKALEIIREKISRGGRDS-LYDLTGLAGG-FKIDEEDLELLETY----V-------GPAIFEEKVQELGREHLGGPEE-   72 (346)
T ss_pred             HHHHHHHHHHHHhccCCcc-ccccccCCCC-hhHHHHHHHHHHHh----c-------CCHHHHHHHHHHHHHHcCCCcc-
Confidence            4567777887765553211 1246666432 22222233333332    1       2347888888999999999654 


Q ss_pred             CcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeC---CCCchhHHHHHHHcCCCCCCEEEEecCCCCC
Q 037144          136 LFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSS---DQTHCAFQKAAQIVGIDRKNIRAIKTTKSSS  212 (502)
Q Consensus       136 ~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s---~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~  212 (502)
                            ..++++||+++|..++.+..+           +++.|++.   ...|.++..++++.|.   +++..       
T Consensus        73 ------~ilv~~gg~~a~~~~~~al~~-----------~gd~Vli~~~d~p~~~s~~~~~~l~ga---~~~~~-------  125 (346)
T TIGR03576        73 ------KILVFNRTSSAILATILALEP-----------PGRKVVHYLPEKPAHPSIPRSCKLAGA---EYFES-------  125 (346)
T ss_pred             ------eEEEECCHHHHHHHHHHHhCC-----------CCCEEEECCCCCCCchhHHHHHHHcCC---EEecc-------
Confidence                  589999999999877766543           56666642   5699999999999998   65322       


Q ss_pred             cccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc---CChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCC
Q 037144          213 YGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGV  289 (502)
Q Consensus       213 ~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~  289 (502)
                        .|+++|+.    . .   .+.+|++| |++++|.+   .||++|+++|++||+|++||.||+.+........... ..
T Consensus       126 --~~l~~l~~----~-~---~~~lIiit-g~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~~~~~~~-~~  193 (346)
T TIGR03576       126 --DELSELKK----I-D---GTSLVVIT-GSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQPPAL-DL  193 (346)
T ss_pred             --CCHHHHhh----C-c---CceEEEEE-CCCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccccccccCCCCCHH-Hc
Confidence              13444322    1 1   12355555 57889998   8999999999999999999999987643210111101 11


Q ss_pred             CCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHH
Q 037144          290 ECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRN  369 (502)
Q Consensus       290 ~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~  369 (502)
                       ++|.++.+++|++.++. .|+++. ++...........+|...                        ..+..+++++..
T Consensus       194 -~~divv~s~SKalaG~r-~G~v~~-~~~li~~l~~~~~~~~~s------------------------~~~~~~~aa~~a  246 (346)
T TIGR03576       194 -GADLVVTSTDKLMDGPR-GGLLAG-RKELVDKIKSVGEQFGLE------------------------AQAPLLAAVVRA  246 (346)
T ss_pred             -CCcEEEeccchhccccc-eEEEEe-CHHHHHHHHHhhcCcccC------------------------ccHHHHHHHHHH
Confidence             47888999999764443 465554 444333222222233221                        012223333333


Q ss_pred             hcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHH
Q 037144          370 FGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNR  449 (502)
Q Consensus       370 ~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  449 (502)
                      +.......+.+...++++++.+.++.   +.+. ++..+.+.+++.+..                          .  ..
T Consensus       247 L~~~~~~~~~~~l~~r~~~~~~~l~~---~~~~-~~~~~f~~~~~~~~~--------------------------~--~~  294 (346)
T TIGR03576       247 LEEFELSRIRDAFKRKEEVYLRLFDK---LNVE-RTPTGFVIKGVEEEK--------------------------L--IE  294 (346)
T ss_pred             HhhccHHHHHHHHHHHHHHHHHHHHh---CCCC-cCCCeEEEEeCCCCC--------------------------H--HH
Confidence            32212244556666777777777764   3333 334555444443210                          0  11


Q ss_pred             HHHHHHHhcCcEEEEeeeEC-CEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144          450 ELLESINVSGKVFMTHAIVG-GIYVLRFAAGNSMTMESHVRAAWTVVQEH  498 (502)
Q Consensus       450 ~l~~~l~~~g~~~~~~~~~~-g~~~lR~~~~~~~t~~~di~~~~~~l~~~  498 (502)
                      ...+.|.+.|.++.++..+. ..+++|+|++.+.-+..+.++++++|++-
T Consensus       295 ~~~~ll~~~gV~v~~~~~f~~~~~~vRis~~~~~~~~~~~~~~~~al~~~  344 (346)
T TIGR03576       295 IGLDLLRNYGIITITAVGMPGASKTLRFDLAAKDAERIGDDYLVEAVKDS  344 (346)
T ss_pred             HHHHHHHhCCEEEeCCcccCCCCCeEEEEEecChHHhcCHHHHHHHHHhc
Confidence            23344555677655544432 25699999984321122799999999764

Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.

>cd00617 Tnase_like Tryptophanase family (Tnase)

Probab=99.79  E-value=8.2e-17  Score=164.43  Aligned_cols=326  Identities=13%  Similarity=0.095  Sum_probs=191.8

Q ss_pred             CCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCC
Q 037144          103 VVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSD  182 (502)
Q Consensus       103 ~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~  182 (502)
                      .+...|..+++..++|+.+.    +++|.+         .+++|+|||+|+..++.+..+           ++++| ++.
T Consensus        44 ~gd~~Y~~~~g~~~Leeaia----~~~g~~---------~vv~t~~Gt~Al~la~~al~~-----------pGD~V-~~~   98 (431)
T cd00617          44 LGDEAYAGSKSFYDLEDAVQ----DLFGFK---------HIIPTHQGRGAENILFSILLK-----------PGRTV-PSN   98 (431)
T ss_pred             hCCCccCCCCCHHHHHHHHH----HHHCCC---------eEEEcCCHHHHHHHHHHHhCC-----------CCCEE-ccC
Confidence            33346888999999998865    455654         379999999999888776543           56666 444


Q ss_pred             CCch-hHHHHHHHcCCCCCCEEEEecCCCC--------CcccCHHHHHHHHHHHHhcCCccEEEEEecCCccc-cccC--
Q 037144          183 QTHC-AFQKAAQIVGIDRKNIRAIKTTKSS--------SYGLSAESVLSQINLDVEAELIPLFLCATVGTTAI-TAVD--  250 (502)
Q Consensus       183 ~~H~-s~~~aa~~~Glg~~~v~~v~~~~~~--------~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~-G~id--  250 (502)
                       .|+ +....+.+.|.   .++.+++++..        .|.+|+++|+++|++...  .++.+|+++.++|++ |..-  
T Consensus        99 -~~f~~~~~~i~~~Ga---~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~--~~~~~I~v~~p~N~~gG~~~s~  172 (431)
T cd00617          99 -MHFDTTRGHIEANGA---VPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGA--ENIPYIVLTITNNTAGGQPVSM  172 (431)
T ss_pred             -CcccchHHHHHhCCC---EeEEEecccccccccccCCCCCcCHHHHHHHhCcccC--CCccEEEEECCcCCCCCccCCH
Confidence             555 55567788999   99999997432        255999999999975411  124478888888887 7774  


Q ss_pred             -ChhHHHHHHHHhCCEEEeeccccccc-ccC----ccch-----hhh-cCCCCCCeeEEccCCcCCCCCcceEEEeeCch
Q 037144          251 -PLKPLCDVAKQFGIWVHVDAAYAGSA-CIC----PEFR-----HFI-DGVECVDSFSFNPHKWLFTTLDCCCLWVKDPS  318 (502)
Q Consensus       251 -pl~eI~~i~~~~g~~lhVDaA~g~~~-~~~----~~~~-----~~~-~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~  318 (502)
                       +|++|.++|++||+|+|.|+|+.... ++.    +.+.     ... .-.+.+|++++++||.+.+|. .|+++.++++
T Consensus       173 ~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~~-GG~i~~~d~~  251 (431)
T cd00617         173 ANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVNI-GGFLALRDDE  251 (431)
T ss_pred             HHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHHHHHHhhccCCEEEEEeecCCCCcc-ceEEEeCcHH
Confidence             56788999999999999999965421 111    1111     110 112369999999999988875 4566666654


Q ss_pred             hhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCch-HHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 037144          319 CLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSL-KLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK  397 (502)
Q Consensus       319 ~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al-~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~  397 (502)
                      .......    +....       ++...+      ++-..+-+ ++..+++.. .+  .+.+++..+.+++|.+.|++. 
T Consensus       252 l~~~~~~----~~~~~-------~~~~~~------gG~~~r~~~A~A~gL~e~-~~--~~~l~~~~~~r~~l~~~L~~~-  310 (431)
T cd00617         252 LYEEARQ----RVVLY-------EGFVTY------GGMAGRDMEALAQGLREA-VE--EDYLRHRVEQVRYLGDRLDEA-  310 (431)
T ss_pred             HHHHHHH----hcccc-------CCcccc------ccccHHHHHHHHHHHHhc-cc--HHHHHHHHHHHHHHHHHHHHC-
Confidence            4332211    11000       000000      11111111 111122211 11  244555666779999999988 


Q ss_pred             CeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh-cCcEEEEeeeE-------C
Q 037144          398 RFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV-SGKVFMTHAIV-------G  469 (502)
Q Consensus       398 ~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~-------~  469 (502)
                      |+.+..|.....+.+....- ..          +..     .+..    ....+..+|.+ .|...+..+.+       .
T Consensus       311 G~~v~~P~Ggh~v~~d~~~~-~~----------~~~-----~~~~----~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~  370 (431)
T cd00617         311 GVPIVEPAGGHAVFIDAREF-LP----------HIP-----QEQF----PAQALAAELYLEAGVRAVELGIFSAGRDPNT  370 (431)
T ss_pred             CCCccCCCcceEEEEEhHHh-cC----------CCC-----cccC----cHHHHHHHHHHHcCeeEEeecceecccCCCC
Confidence            88887544333333333210 00          000     0000    12344433333 34433332211       1


Q ss_pred             ------CEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          470 ------GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       470 ------g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                            .-..+|+++--..-+.+++|++.+.|..+.++
T Consensus       371 ~~~~~~~~~~~rl~~prr~~t~~~~~~~~~~~~~~~~~  408 (431)
T cd00617         371 GENKYPELELVRLAIPRRVYTQDHMDYVAAAVIALYER  408 (431)
T ss_pred             CcccCCccceeEEeccccccCHHHHHHHHHHHHHHHhh
Confidence                  13689999864445677999999999988653

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.

>PRK07908 hypothetical protein; Provisional

Probab=99.79  E-value=1.4e-16  Score=160.75  Aligned_cols=306  Identities=13%  Similarity=0.078  Sum_probs=193.5

Q ss_pred             CCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHH
Q 037144           87 SSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLK  166 (502)
Q Consensus        87 ~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~  166 (502)
                      ..+|..+.+.+...++. ...|....+..++.    +++++.+|++.+       ..++|+|+++++..++.  ..    
T Consensus        34 ~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr----~aia~~~~~~~~-------~I~it~Ga~~al~~~~~--l~----   95 (349)
T PRK07908         34 DTPPEWLRERLAARLGD-LAAYPSTEDERRAR----AAVAARHGRTPD-------EVLLLAGAAEGFALLAR--LR----   95 (349)
T ss_pred             CCCCHHHHHHHHHHhhH-hhcCCCccchHHHH----HHHHHHhCcChh-------hEEECCCHHHHHHHHHh--cC----
Confidence            44555566666665533 22344333444444    555666787654       68999999998865544  11    


Q ss_pred             HhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccc
Q 037144          167 KIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAI  246 (502)
Q Consensus       167 ~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~  246 (502)
                             ++.++ +..+++......++..|+   +++.+|++.  ++.+|+++++    +.      +.+|+++.++|+|
T Consensus        96 -------~~~vi-v~~P~y~~~~~~~~~~G~---~i~~v~~~~--~~~~d~~~l~----~~------~~~i~l~np~NPT  152 (349)
T PRK07908         96 -------PRRAA-VVHPSFTEPEAALRAAGI---PVHRVVLDP--PFRLDPAAVP----DD------ADLVVIGNPTNPT  152 (349)
T ss_pred             -------CCeEE-EeCCCChHHHHHHHHcCC---EEEeeccCc--ccCcChhHhc----cC------CCEEEEcCCCCCC
Confidence                   34344 455677777788899999   999999975  3788988553    22      2377788999999


Q ss_pred             cccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEE-ccCCcCC-CCCcceEEEeeCchhhhhhh
Q 037144          247 TAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSF-NPHKWLF-TTLDCCCLWVKDPSCLLSTL  324 (502)
Q Consensus       247 G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~-~~hK~l~-~p~~~g~~~~r~~~~l~~~~  324 (502)
                      |.+-|.++|.++|++ +.++++|++|+... .. .... +.....-+++++ +++|.++ ....+|+++.. +..+....
T Consensus       153 G~~~~~~~l~~l~~~-~~~iIvDe~y~~~~-~~-~~~~-l~~~~~~~~i~i~S~SK~~~l~GlRiG~~~~~-~~~~~~~~  227 (349)
T PRK07908        153 SVLHPAEQLLALRRP-GRILVVDEAFADAV-PG-EPES-LAGDDLPGVLVLRSLTKTWSLAGLRVGYALGA-PDVLARLT  227 (349)
T ss_pred             CCCcCHHHHHHHHhc-CCEEEEECcchhhc-cC-Cccc-cccccCCCEEEEeecccccCCccceeeeeecC-HHHHHHHH
Confidence            999999999999964 78999999997542 11 1111 111122346665 7999886 55667888864 33332211


Q ss_pred             cCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHH---hcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 037144          325 STNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRN---FGVANLRNFIRSHVGMAKLFERLVTSDKRFEV  401 (502)
Q Consensus       325 ~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~---~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l  401 (502)
                      .....+                    .      ...+...+....   .+.+.+++..++..++++++.+.|+++ ++++
T Consensus       228 ~~~~~~--------------------~------~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~  280 (349)
T PRK07908        228 RGRAHW--------------------P------VGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAV-GARV  280 (349)
T ss_pred             hcCCCC--------------------C------ccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhC-CcEe
Confidence            111100                    0      011111111111   123456777888889999999999988 7887


Q ss_pred             ecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC--CEEEEEEEec
Q 037144          402 AFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG--GIYVLRFAAG  479 (502)
Q Consensus       402 ~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lR~~~~  479 (502)
                      ..++..+.+++.++.                               ...+.+.+.++|..+.++..+.  +..++|++++
T Consensus       281 ~~p~~g~~~~~~~~~-------------------------------~~~~~~~l~~~gI~v~~g~~f~~~~~~~vRis~~  329 (349)
T PRK07908        281 VDPAAAPFVLVRVPD-------------------------------AELLRKRLRERGIAVRRGDTFPGLDPDYLRLAVR  329 (349)
T ss_pred             ccCCCceEEEEECCc-------------------------------HHHHHHHHHhCCEEEEECCCCCCCCCCeEEEEeC
Confidence            755566666665432                               1355666667787655544443  3579999985


Q ss_pred             CCCCcHHHHHHHHHHHHHHHH
Q 037144          480 NSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       480 ~~~t~~~di~~~~~~l~~~~~  500 (502)
                          +++++++++++|+++..
T Consensus       330 ----~~~~~~~l~~al~~~~~  346 (349)
T PRK07908        330 ----PRAEVPVLVQALAEILK  346 (349)
T ss_pred             ----CCccHHHHHHHHHHHHh
Confidence                45599999999998754

>PRK07811 cystathionine gamma-synthase; Provisional

Probab=99.78  E-value=6.3e-17  Score=164.81  Aligned_cols=220  Identities=15%  Similarity=0.172  Sum_probs=153.3

Q ss_pred             cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144          110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ  189 (502)
Q Consensus       110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~  189 (502)
                      ..|...++|+.    ++++.|.+.         ++++++|++|+..++.+...           +++.|+++...|.+..
T Consensus        59 ~~p~~~~Le~~----lA~~~g~~~---------~i~~~sG~~Ai~~~l~all~-----------~Gd~Vl~~~~~y~~t~  114 (388)
T PRK07811         59 GNPTRTALEEQ----LAALEGGAY---------GRAFSSGMAATDCLLRAVLR-----------PGDHIVIPNDAYGGTF  114 (388)
T ss_pred             CCccHHHHHHH----HHHHhCCCc---------eEEeCCHHHHHHHHHHHHhC-----------CCCEEEEcCCCchHHH
Confidence            44566666655    677777653         45667788888777765533           6778888888887544


Q ss_pred             HHH-HH---cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144          190 KAA-QI---VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW  265 (502)
Q Consensus       190 ~aa-~~---~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~  265 (502)
                      ... ..   .|+   +++.++.       .|+++|++++++++      .+|+++.++|++|.+.|+++|+++|+++|++
T Consensus       115 ~~~~~~~~~~gi---~~~~~d~-------~d~e~l~~~i~~~t------klV~ie~p~NPtg~~~dl~~I~~la~~~gi~  178 (388)
T PRK07811        115 RLIDKVFTRWGV---EYTPVDL-------SDLDAVRAAITPRT------KLIWVETPTNPLLSITDIAALAELAHDAGAK  178 (388)
T ss_pred             HHHHHhCcCCCe---EEEEeCC-------CCHHHHHHhcCcCC------eEEEEECCCCCcceecCHHHHHHHHHHcCCE
Confidence            432 22   355   6665543       48999999987644      3888899999999999999999999999999


Q ss_pred             EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCccc
Q 037144          266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQ  343 (502)
Q Consensus       266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~  343 (502)
                      +++|++|+.+....+ ..      .++|+++.+++|++++|.+  .|+++++++.... .+.    ++...         
T Consensus       179 lIvD~a~a~~~~~~p-~~------~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~-~~~----~~~~~---------  237 (388)
T PRK07811        179 VVVDNTFASPYLQQP-LA------LGADVVVHSTTKYIGGHSDVVGGALVTNDEELDE-AFA----FLQNG---------  237 (388)
T ss_pred             EEEECCCCccccCCc-hh------hCCcEEEecCceeecCCCCcEEEEEEECCHHHHH-HHH----HHHHh---------
Confidence            999999977644322 11      1789999999999998754  4767766654322 111    11100         


Q ss_pred             ccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144          344 EVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA  402 (502)
Q Consensus       344 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~  402 (502)
                                .+....++..|..++.  .+.+..++++..+++..+.+.|++.|+++-+
T Consensus       238 ----------~g~~~s~~~a~l~~~~--L~tl~~R~~~~~~na~~la~~L~~~p~v~~V  284 (388)
T PRK07811        238 ----------AGAVPGPFDAYLTLRG--LKTLAVRMDRHSENAEAVAEFLAGHPEVSTV  284 (388)
T ss_pred             ----------cCCCCCHHHHHHHHhc--cCcHHHHHHHHHHHHHHHHHHHHhCCCeeEE
Confidence                      0011133455655554  3557788899999999999999999988754

>PRK04635 histidinol-phosphate aminotransferase; Provisional

Probab=99.78  E-value=2.9e-17  Score=165.94  Aligned_cols=282  Identities=10%  Similarity=0.037  Sum_probs=183.7

Q ss_pred             HHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCC-eEEEeCCCCchhHHHHHHHcCCCC
Q 037144          121 VMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISK-LVVYSSDQTHCAFQKAAQIVGIDR  199 (502)
Q Consensus       121 ~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~-~~v~~s~~~H~s~~~aa~~~Glg~  199 (502)
                      +++.+++.+|++.+       ..++|+|+++++...+.+...           ++ +.|++..+.+..+...++..|+  
T Consensus        65 Lr~aia~~~~~~~~-------~I~it~Gs~~~i~~~~~~~~~-----------~g~d~vlv~~P~y~~y~~~~~~~g~--  124 (354)
T PRK04635         65 LINAYSAYAGVAPE-------QILTSRGADEAIELLIRAFCE-----------PGQDSIACFGPTYGMYAISAETFNV--  124 (354)
T ss_pred             HHHHHHHHhCcCHH-------HEEEeCCHHHHHHHHHHHhcC-----------CCCCeEEEcCCChHHHHHHHHHcCC--
Confidence            34556667788765       689999999988766654432           44 7788888888888888999999  


Q ss_pred             CCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh-CCEEEeeccccccccc
Q 037144          200 KNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF-GIWVHVDAAYAGSACI  278 (502)
Q Consensus       200 ~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~-g~~lhVDaA~g~~~~~  278 (502)
                       +++.||++.  ++.+|++.+++ + ++      +.+|+++.++|+||.+-|.+++.++++.. ++++++|++|..+...
T Consensus       125 -~v~~v~~~~--~~~~~~~~l~~-~-~~------~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~~~~~~  193 (354)
T PRK04635        125 -GVKALPLTA--DYQLPLDYIEQ-L-DG------AKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYIEFCPE  193 (354)
T ss_pred             -EEEEEecCC--CCCCCHHHHHh-c-cC------CCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchHhhccC
Confidence             999999974  46899998873 3 22      33788899999999999999999999874 7999999999654311


Q ss_pred             CccchhhhcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCC
Q 037144          279 CPEFRHFIDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRR  357 (502)
Q Consensus       279 ~~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~  357 (502)
                       ...........+. .+..+++|+++ .+..+|+++.. ++.+.........|                    +      
T Consensus       194 -~s~~~~~~~~~~~-iv~~S~SK~~~l~GlRlG~~i~~-~~~~~~l~~~~~~~--------------------~------  244 (354)
T PRK04635        194 -YSVADLLASYPNL-VVLRTLSKAFALAGARCGFTLAN-EELIEILMRVIAPY--------------------P------  244 (354)
T ss_pred             -cchHHHHhhCCCE-EEEechHHHhhhhHHHHhhhhCC-HHHHHHHHhhcCCC--------------------C------
Confidence             1111111111111 45667999986 45567887764 33332211111111                    0      


Q ss_pred             CCchHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCccc
Q 037144          358 FRSLKLWVVIRNF---GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQ  434 (502)
Q Consensus       358 ~~al~~~~~l~~~---g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~  434 (502)
                      .......+++..+   |.+.+.+.+++..+.++++.+.|++++++++. ++..+.+.+++. .                 
T Consensus       245 ~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~~~g~f~~~~~~-~-----------------  305 (354)
T PRK04635        245 VPLPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAALSMYGGAKVL-EGNGNYVLAKFD-D-----------------  305 (354)
T ss_pred             CCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEC-CCCCcEEEEECC-C-----------------
Confidence            0111222333333   34456666777888889999999998767765 555555555442 1                 


Q ss_pred             ccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144          435 YRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEH  498 (502)
Q Consensus       435 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~  498 (502)
                                   ..++.+.+.++|..+..........++|++++    +.+++++++++|++.
T Consensus       306 -------------~~~~~~~l~~~gv~v~~~~~~~~~~~lRis~~----~~e~~~~l~~al~~~  352 (354)
T PRK04635        306 -------------VDAVFKALWDAGIVARAYKDPRLANCIRFSFS----NRAETDKLIGLIRNQ  352 (354)
T ss_pred             -------------HHHHHHHHHHCCEEEEECCCCCCCCeEEEEeC----CHHHHHHHHHHHHHh
Confidence                         12455666667865433322223568999975    567999999999763

>PRK09105 putative aminotransferase; Provisional

Probab=99.78  E-value=1.5e-16  Score=161.39  Aligned_cols=280  Identities=11%  Similarity=0.057  Sum_probs=187.3

Q ss_pred             HHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCC
Q 037144          121 VMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRK  200 (502)
Q Consensus       121 ~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~  200 (502)
                      +++.+++.+|++.+       ..++|+|+++++..++.+..+           +++.|+++++.|..+...++..|+   
T Consensus        83 Lr~aia~~~~v~~e-------~I~it~Gs~~ai~~~~~~l~~-----------~gd~Vli~~P~y~~~~~~~~~~g~---  141 (370)
T PRK09105         83 LRTLFAAQEGLPAD-------HVMAYAGSSEPLNYAVLAFTS-----------PTAGLVTADPTYEAGWRAADAQGA---  141 (370)
T ss_pred             HHHHHHHHhCcChh-------hEEEcCChHHHHHHHHHHHcC-----------CCCEEEEeCCChHHHHHHHHHcCC---
Confidence            44556777888765       689999999988777665533           567888899999999999999999   


Q ss_pred             CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHH--hCCEEEeeccccccccc
Q 037144          201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQ--FGIWVHVDAAYAGSACI  278 (502)
Q Consensus       201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~--~g~~lhVDaA~g~~~~~  278 (502)
                      +++.+|.+.  ++.+|++.|++.. +.      +.+|+++.++|+||.+-+.++|.++++.  +++|+++|.+|..+.. 
T Consensus       142 ~~~~v~~~~--~~~~d~~~l~~~~-~~------~~~v~l~nP~NPTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~~f~~-  211 (370)
T PRK09105        142 PVAKVPLRA--DGAHDVKAMLAAD-PN------AGLIYICNPNNPTGTVTPRADIEWLLANKPAGSVLLVDEAYIHFSD-  211 (370)
T ss_pred             eEEEecCCC--CCCCCHHHHHhcC-CC------CCEEEEeCCCCCCCcCcCHHHHHHHHHhCCCCcEEEEECchHHhcc-
Confidence            999999874  4689999998752 22      2378888999999999998988888764  4899999999954321 


Q ss_pred             CccchhhhcCCCCCCeeE-EccCCcCC-CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCC
Q 037144          279 CPEFRHFIDGVECVDSFS-FNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCR  356 (502)
Q Consensus       279 ~~~~~~~~~~~~~aDsi~-~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr  356 (502)
                      .+.......  ...+.++ .+++|+++ ....+|+++.. +..+. .+... .+   .                      
T Consensus       212 ~~s~~~~~~--~~~~vi~~~SfSK~~g~~GlRiG~~v~~-~~~i~-~l~~~-~~---~----------------------  261 (370)
T PRK09105        212 APSVVDLVA--QRKDLIVLRTFSKLYGMAGMRLGLAAAR-PDLLA-KLARF-GH---N----------------------  261 (370)
T ss_pred             CcchHHHHh--hCCCEEEEecccHhhcCCccceeeeecC-HHHHH-HHHhc-CC---C----------------------
Confidence            111111111  1345555 46889986 44567887753 33322 22111 00   0                      


Q ss_pred             CCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccc
Q 037144          357 RFRSLKLWVVIRNFG-VANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQY  435 (502)
Q Consensus       357 ~~~al~~~~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~  435 (502)
                      ........++...+. .+.+++..++..++++++.+.|++. ++++. +++.+++.+.....                  
T Consensus       262 ~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~-~~~~~f~~~~~~~~------------------  321 (370)
T PRK09105        262 PLPVPAAAAGLASLRDPKLVPQRRAENAAVREDTIAWLKKK-GYKCT-PSQANCFMVDVKRP------------------  321 (370)
T ss_pred             CcCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHC-CCCcC-CCCCcEEEEeCCCC------------------
Confidence            012223334444432 3556777788889999999999987 77765 56666665443211                  


Q ss_pred             cccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC-CEEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144          436 RQFSEEERTNEFNRELLESINVSGKVFMTHAIVG-GIYVLRFAAGNSMTMESHVRAAWTVVQEHL  499 (502)
Q Consensus       436 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-g~~~lR~~~~~~~t~~~di~~~~~~l~~~~  499 (502)
                                  ..++.+.|.++|..+ .. .+. ...++|++++    +++++++++++|+++.
T Consensus       322 ------------~~~l~~~L~~~gI~v-~~-~~~~~~~~~Ris~~----~~~~~~~l~~al~~~~  368 (370)
T PRK09105        322 ------------AKAVADAMAKQGVFI-GR-SWPIWPNWVRVTVG----SEEEMAAFRSAFAKVM  368 (370)
T ss_pred             ------------HHHHHHHHHHCCcEE-ec-CCCCCCCeEEEEcC----CHHHHHHHHHHHHHHh
Confidence                        235677777777643 21 222 2579999986    4568999999998765

>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial

Probab=99.78  E-value=4.8e-17  Score=164.52  Aligned_cols=218  Identities=13%  Similarity=0.145  Sum_probs=154.8

Q ss_pred             cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144          110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ  189 (502)
Q Consensus       110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~  189 (502)
                      ..|....+|++    ++++.|.+         .+++++||+.|+..++.+...           +++.|++++..|.+..
T Consensus        48 gnPt~~~lE~~----lA~l~g~~---------~~~~~~sG~~Ai~~al~all~-----------~GD~Vl~~~~~y~~t~  103 (377)
T TIGR01324        48 GTLTHFALQDA----MCELEGGA---------GCYLYPSGLAAVTNSILAFVK-----------AGDHVLMVDSAYEPTR  103 (377)
T ss_pred             CCccHHHHHHH----HHHHhCCC---------cEEEECcHHHHHHHHHHHhcC-----------CCCEEEEcCCCcHHHH
Confidence            55766777766    56666754         468899999999877765532           6778888888876655


Q ss_pred             HH----HHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144          190 KA----AQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW  265 (502)
Q Consensus       190 ~a----a~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~  265 (502)
                      ..    ...+|+   ++..++.+       +.++|++++++++      .+|+++.++|++|.+.||++|+++|+++|+|
T Consensus       104 ~~~~~~~~~~gi---~v~~~d~~-------~~e~l~~~i~~~t------klV~lesp~Np~g~~~dl~~I~~la~~~g~~  167 (377)
T TIGR01324       104 YFCDIVLKRMGV---DITYYDPL-------IGEDIATLIQPNT------KVLFLEAPSSITFEIQDIPAIAKAARNPGIV  167 (377)
T ss_pred             HHHHHHHHhcCc---EEEEECCC-------CHHHHHHhcCCCc------eEEEEECCCCCCCcHHHHHHHHHHHHHcCCE
Confidence            43    345677   77776532       2278888886544      3899999999999999999999999999999


Q ss_pred             EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCccc
Q 037144          266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQ  343 (502)
Q Consensus       266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~  343 (502)
                      ++||++|+.+...-| ..      .++|.++.+.|||++++.+  .|+++. +++.......  ..++..          
T Consensus       168 livD~t~a~g~~~~p-l~------~gaDivv~S~tK~l~G~~d~~gG~v~~-~~~~~~~l~~--~~~~~G----------  227 (377)
T TIGR01324       168 IMIDNTWAAGLLFKP-LE------HGVDISIQAGTKYLVGHSDIMIGTVVA-NARTWDQLRE--HSYLMG----------  227 (377)
T ss_pred             EEEECCCccccccCc-cc------cCceEEEecCceeccCCCCceEEEEEe-CHHHHHHHHH--HHHHhC----------
Confidence            999999987765332 11      2899999999999987754  354544 4433221110  111111          


Q ss_pred             ccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 037144          344 EVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEV  401 (502)
Q Consensus       344 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l  401 (502)
                                  ....+...|..++  |.+-+..+++++.++|..+.+.|++.|.++-
T Consensus       228 ------------~~l~p~~a~~~~r--gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~  271 (377)
T TIGR01324       228 ------------QMVDADDAYTTLR--GLRTLGVRLKQHQESSLAIAKWLSEQPEVAR  271 (377)
T ss_pred             ------------CCCCHHHHHHHHh--hhhhHHHHHHHHHHHHHHHHHHHHhCCCcCE
Confidence                        1123456676666  4567778899999999999999999988753

This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.

>PRK08861 cystathionine gamma-synthase; Provisional

Probab=99.78  E-value=5.5e-17  Score=164.30  Aligned_cols=220  Identities=14%  Similarity=0.129  Sum_probs=157.3

Q ss_pred             cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144          110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ  189 (502)
Q Consensus       110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~  189 (502)
                      ..|....+|+.    ++++.|.+         .+++++||++|+..++.+...           +++.|+++...|.+..
T Consensus        51 ~npt~~~Le~~----lA~leg~e---------~ivvt~gg~~Ai~~~l~all~-----------~Gd~Il~~~~~y~~~~  106 (388)
T PRK08861         51 GNPNRGLLEQT----LSELESGK---------GAVVTNCGTSALNLWVSALLG-----------PDDLIVAPHDCYGGTY  106 (388)
T ss_pred             CCchHHHHHHH----HHHHhCCC---------eEEEECCHHHHHHHHHHHHcC-----------CCCEEEEcCCchHHHH
Confidence            45666666655    67777742         579999999999777765532           6778888888887544


Q ss_pred             HHH----HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144          190 KAA----QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW  265 (502)
Q Consensus       190 ~aa----~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~  265 (502)
                      ...    ...|+   +++.++       ..|++++++++++++      .+|+++.++|++|.+-|+++|+++|+++|++
T Consensus       107 ~~~~~~~~~~gi---~v~~vd-------~~d~e~l~~~i~~~t------klV~lesP~NPtG~v~dl~~I~~la~~~gi~  170 (388)
T PRK08861        107 RLFNTRANKGDF---KVQFVD-------QSDAAALDAALAKKP------KLILLETPSNPLVRVVDIAELCQKAKAVGAL  170 (388)
T ss_pred             HHHHHHHhcCCe---EEEEEC-------CCCHHHHHHhcCcCC------eEEEEECCCCCCCcccCHHHHHHHHHHcCCE
Confidence            332    22355   666664       248899999886544      3899999999999999999999999999999


Q ss_pred             EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCccc
Q 037144          266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQ  343 (502)
Q Consensus       266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~  343 (502)
                      ++||.+|+.+....| . .     -++|.++.+.|||+++|.+  .|+++.+++....... ....++            
T Consensus       171 vIvDea~~~~~~~~p-l-~-----~GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~-~~~~~~------------  230 (388)
T PRK08861        171 VAVDNTFLTPVLQKP-L-E-----LGADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELA-WWGNCI------------  230 (388)
T ss_pred             EEEECCccccccCCC-c-c-----cCCCEEEeecceeccCCCcceeEEEEecHHHHHHHHH-HHHhcc------------
Confidence            999999987654322 1 1     1799999999999998865  4666565543322111 000111            


Q ss_pred             ccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144          344 EVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA  402 (502)
Q Consensus       344 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~  402 (502)
                                 +-...+...|..++  |.+-+.-+++++.++|..+.+.|++.|.++-+
T Consensus       231 -----------G~~~~p~~a~l~~r--gl~Tl~lR~~~~~~~a~~~a~~L~~~p~v~~V  276 (388)
T PRK08861        231 -----------GATGTPFDSYMTLR--GIRTLGARMRVHEESAQQILAYLQTQSLVGTI  276 (388)
T ss_pred             -----------CCCCChHHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHhCCCeeEE
Confidence                       11224556776665  56778889999999999999999999988643

>PRK08114 cystathionine beta-lyase; Provisional

Probab=99.78  E-value=4.6e-17  Score=164.22  Aligned_cols=220  Identities=11%  Similarity=0.118  Sum_probs=161.6

Q ss_pred             ccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhH
Q 037144          109 ISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAF  188 (502)
Q Consensus       109 ~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~  188 (502)
                      ...|....+|+.    ++++-|..         .++++++|+.|+.+++.+...           +++.|+++...|.++
T Consensus        59 ~~nPt~~~le~~----la~LEg~~---------~a~~~~SGmaAi~~~~~~ll~-----------~GD~Vv~~~~~Yg~t  114 (395)
T PRK08114         59 RGTLTHFSLQEA----MCELEGGA---------GCALYPCGAAAVANAILAFVE-----------QGDHVLMTGTAYEPT  114 (395)
T ss_pred             CCChhHHHHHHH----HHHHhCCC---------eEEEEhHHHHHHHHHHHHHcC-----------CCCEEEEeCCCcHHH
Confidence            467777778876    55665543         467888899988777665432           677888988888776


Q ss_pred             HHHH----HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhC-
Q 037144          189 QKAA----QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFG-  263 (502)
Q Consensus       189 ~~aa----~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g-  263 (502)
                      .+.+    +..|+   +++.++.       .|++.++++|+++++      +|.+..++|++|.+-||++|+++|+++| 
T Consensus       115 ~~l~~~~l~~~Gi---~v~~vd~-------~d~~~l~~~l~~~Tr------lV~~EtpsNp~~~v~DI~~Ia~ia~~~g~  178 (395)
T PRK08114        115 QDFCSKILSKLGV---TTTWFDP-------LIGADIAKLIQPNTK------VVFLESPGSITMEVHDVPAIVAAVRSVNP  178 (395)
T ss_pred             HHHHHHHHHhcCc---EEEEECC-------CCHHHHHHhcCCCce------EEEEECCCCCCCEeecHHHHHHHHHHhCC
Confidence            6544    55688   8888874       367889999976543      8999999999999999999999999985 


Q ss_pred             -CEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC--cceEEEeeCchhhhhhhcCCcccccCccCCCCC
Q 037144          264 -IWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL--DCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEP  340 (502)
Q Consensus       264 -~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~--~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~  340 (502)
                       +.++||++++.+.. ++....      ++|++..+.|||++++.  .+|+++. ++..... +... .+.         
T Consensus       179 g~~lvVDnT~a~p~~-~~pl~~------GaDivv~S~tKyl~Ghsdv~~G~v~~-~~~~~~~-l~~~-~~~---------  239 (395)
T PRK08114        179 DAVIMIDNTWAAGVL-FKALDF------GIDISIQAGTKYLVGHSDAMIGTAVA-NARCWEQ-LREN-SYL---------  239 (395)
T ss_pred             CCEEEEECCCccccc-cCHHHc------CCcEEEEcCcccccCCCcceeEEEEc-CHHHHHH-HHHH-HHh---------
Confidence             99999999988765 433332      89999999999999885  5665544 3332211 1100 000         


Q ss_pred             cccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144          341 KEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA  402 (502)
Q Consensus       341 ~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~  402 (502)
                                   .+.-..+...|..++  |.+-+.-+++++.++|..+.+.|+++|.++-+
T Consensus       240 -------------~G~~~~p~~a~l~~r--gl~TL~lR~~~~~~na~~va~~L~~hp~V~~V  286 (395)
T PRK08114        240 -------------MGQMVDADTAYMTSR--GLRTLGVRLRQHEESSLKVAEWLAEHPEVARV  286 (395)
T ss_pred             -------------ccCCCCHHHHHHHHc--CCCcHHHHHHHHHHHHHHHHHHHHcCCCEeEE
Confidence                         111235567776665  56778889999999999999999999988743

>PLN02672 methionine S-methyltransferase

Probab=99.78  E-value=1.4e-16  Score=175.69  Aligned_cols=349  Identities=11%  Similarity=0.107  Sum_probs=208.6

Q ss_pred             CCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHH
Q 037144           87 SSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLK  166 (502)
Q Consensus        87 ~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~  166 (502)
                      ..+|..+.+.+...+.....    +++..++.+.+++|+++.+|++.+.    ....++++|+++++..++.+..+    
T Consensus       709 ~ppPp~V~eAi~eal~~~~~----s~g~pdlr~aLa~~la~~~Gv~~d~----~e~IIvt~Gs~elL~lll~aLl~----  776 (1082)
T PLN02672        709 LPVPSAVKASIFESFVRQNI----SESETDPRPSILQFIKSNYGFPTDS----CTEFVYGDTSLALFNKLVLCCVQ----  776 (1082)
T ss_pred             CCCCHHHHHHHHHHHhhcCC----CCCChHHHHHHHHHHHHHhCcCCCC----CCEEEEeCCHHHHHHHHHHHHcC----
Confidence            33455566666555433221    1223456789999999999986531    01466666665555444444433    


Q ss_pred             HhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCC-cc
Q 037144          167 KIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGT-TA  245 (502)
Q Consensus       167 ~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gt-t~  245 (502)
                             +++.|++..++++.+..+++..|.   +++.||+++++++.+|++.|++++++..+    + +|+++.++ |+
T Consensus       777 -------pGD~VLVp~PtY~~Y~~~a~~~Ga---~vv~Vpl~~e~gf~lD~d~Le~al~~~~~----~-~I~L~nPnhNP  841 (1082)
T PLN02672        777 -------EGGTLCFPAGSNGTYVSAAKFLKA---NFRRIPTKSSDGFKLTAKTLASTLETVKK----P-WVYISGPTINP  841 (1082)
T ss_pred             -------CCCEEEEeCCChHHHHHHHHHcCC---EEEEEecccccCCCCCHHHHHHHhccCCC----C-EEEEECcCCCC
Confidence                   678888999999999999999999   99999997555689999999999864211    2 57777776 99


Q ss_pred             cccc---CChhHHHHHHHHhCCEEEeecccccccccCcc-----chhhhcCCCC---C-Cee-EEccCCcCC-CCCcceE
Q 037144          246 ITAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPE-----FRHFIDGVEC---V-DSF-SFNPHKWLF-TTLDCCC  311 (502)
Q Consensus       246 ~G~i---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~-----~~~~~~~~~~---a-Dsi-~~~~hK~l~-~p~~~g~  311 (502)
                      ||.+   +.+++|+++|++||+++++|.+|+...+..+.     ....+.....   . .++ ..++.|.++ ....+|+
T Consensus       842 TG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGy  921 (1082)
T PLN02672        842 TGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGF  921 (1082)
T ss_pred             cCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHhee
Confidence            9998   56778888999999999999999765543211     1111111111   1 133 347886665 5566888


Q ss_pred             EEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc------HHHHHHHHHHHHHH
Q 037144          312 LWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG------VANLRNFIRSHVGM  385 (502)
Q Consensus       312 ~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g------~~g~~~~~~~~~~l  385 (502)
                      ++..++.... .+.....+....                      ....+.+..++..+.      .+.+.+..+.+.++
T Consensus       922 lIap~~eLi~-~l~~~~~~s~~~----------------------~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~r  978 (1082)
T PLN02672        922 LALNDSVLID-AFHSAPGLSRPH----------------------STLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSR  978 (1082)
T ss_pred             EEeCCHHHHH-HHHHhhhhcCCC----------------------cHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHH
Confidence            8775553332 221111110000                      001122222222221      23455666778888


Q ss_pred             HHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEe
Q 037144          386 AKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTH  465 (502)
Q Consensus       386 a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~  465 (502)
                      ++++.+.|++. ++++. +|+.+++.|...+.....       ..+.+.   .....+......++.+.|.++..+.+.+
T Consensus       979 Rd~L~e~L~~~-Gi~v~-~PeGGFfLwl~l~~~l~~-------~~~~~~---~~~~~~~~lds~efae~LLee~GVaV~P 1046 (1082)
T PLN02672        979 AERLKETLEAC-GWDVL-EPQGGISMVAKPSAYLGK-------TVKLKS---IDGDTGIKLDSSNIREAILKSTGLCINS 1046 (1082)
T ss_pred             HHHHHHHHHHC-CCeEe-cCCcEEEEEEEccccccc-------cccccc---cccccccCCCHHHHHHHHHHcCCEEEec
Confidence            99999999987 78765 667777766532210000       000000   0000000001246777777663444445


Q ss_pred             eeE-CCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144          466 AIV-GGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       466 ~~~-~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~  500 (502)
                      +.+ +..+++|++++   +++++++++++.|++..+
T Consensus      1047 Gs~FG~~g~~RIsfa---~~~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672       1047 SSWTGIPGYCRFSFA---LEDSEFDRALKAIARFKE 1079 (1082)
T ss_pred             CcccCCCCeEEEEec---CCHHHHHHHHHHHHHHHH
Confidence            444 44579999987   467799999999988654

>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.78  E-value=1.4e-16  Score=163.46  Aligned_cols=244  Identities=11%  Similarity=0.079  Sum_probs=157.8

Q ss_pred             cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144          110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ  189 (502)
Q Consensus       110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~  189 (502)
                      ..|....+|    +.++++.|.+         ..+++++|+.|+..++.....           +++.|+++...|.+..
T Consensus        67 ~~pt~~~le----~~la~l~g~~---------~~v~fsSG~~Ai~~al~~ll~-----------~Gd~VI~~~~~y~~t~  122 (437)
T PRK05613         67 TNPTVEALE----NRIASLEGGV---------HAVAFASGQAAETAAILNLAG-----------AGDHIVTSPRLYGGTE  122 (437)
T ss_pred             cChHHHHHH----HHHHHHhCCC---------eEEEeCCHHHHHHHHHHHhcC-----------CCCEEEECCCccHHHH
Confidence            445555555    4577888874         256777777888766654421           6788999988888763


Q ss_pred             ----HHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144          190 ----KAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW  265 (502)
Q Consensus       190 ----~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~  265 (502)
                          +.+...|+   +++.++ ++     .|+++|+++|+++++      +|++...++++|.+.||++|+++|+++|+.
T Consensus       123 ~~~~~~l~~~Gi---~v~~vd-~~-----~d~e~l~~~l~~~tk------~V~~e~~~Np~~~v~di~~I~~la~~~gi~  187 (437)
T PRK05613        123 TLFLVTLNRLGI---EVTFVE-NP-----DDPESWQAAVQPNTK------AFFGETFANPQADVLDIPAVAEVAHRNQVP  187 (437)
T ss_pred             HHHHHHHHhcCe---EEEEEC-CC-----CCHHHHHHhCCccCe------EEEEECCCCCCCcccCHHHHHHHHHHcCCe
Confidence                44566788   899887 32     288999999976543      677778899999999999999999999999


Q ss_pred             EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-cceEEEeeCch-hhhhh--hcCCcccccCccCCCCCc
Q 037144          266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-DCCCLWVKDPS-CLLST--LSTNPQYLKNEATDQEPK  341 (502)
Q Consensus       266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~-~l~~~--~~~~~~yl~~~~~~~~~~  341 (502)
                      +|||++++.+....+ . ..     ++|.+++++||+++++. +.|.+++.+.. .....  ....-+++....... ..
T Consensus       188 livD~t~a~g~~~~p-~-~~-----GaDivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  259 (437)
T PRK05613        188 LIVDNTIATAALVRP-L-EL-----GADVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAY-HG  259 (437)
T ss_pred             EEEECCCccccccCh-H-Hh-----CCCEEEeeccceecCCCcceeEEEEecCcccccccccccccCCCCCCCcccc-cc
Confidence            999999977654322 1 11     79999999999997653 34666663321 10000  000000000000000 00


Q ss_pred             ccccCCC----------cccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144          342 EQEVGYK----------DWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA  402 (502)
Q Consensus       342 ~~~~~~~----------~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~  402 (502)
                      -...+..          .+....+-...+...|..++  |.+.+..+++++.++|..+.+.|+++|.++-+
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~r--gl~TL~lR~~~~~~nA~~lA~~L~~hp~V~~V  328 (437)
T PRK05613        260 LKYADLGAPAFGLKARAGLLRDTGATLSPFNAWVTAQ--GLDTLSLRLERHNENAIKVAEFLNNHEKVAKV  328 (437)
T ss_pred             ccccccchHHHHHHHHHHHHHhcCCCCCHHHHHHHHc--ccCcHHHHHHHHHHHHHHHHHHHHcCCCcceE
Confidence            0000000          01111233345567776665  66888999999999999999999999988543

>PRK09028 cystathionine beta-lyase; Provisional

Probab=99.78  E-value=1.1e-16  Score=162.04  Aligned_cols=220  Identities=13%  Similarity=0.117  Sum_probs=155.3

Q ss_pred             cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144          110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ  189 (502)
Q Consensus       110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~  189 (502)
                      ..|....+|+.+    +++.|..         .+++++||++|+..++.+..+           +++.|+++...|.+..
T Consensus        59 ~npt~~~Le~~i----A~le~~~---------~~~~~~sG~~Ai~~~l~all~-----------~GD~Vvv~~~~Y~~t~  114 (394)
T PRK09028         59 GTPTHFAFQAAI----VELEGGA---------GTALYPSGAAAISNALLSFLK-----------AGDHLLMVDSCYEPTR  114 (394)
T ss_pred             CCchHHHHHHHH----HHHhCCC---------cEEEECCHHHHHHHHHHHHhC-----------CCCEEEEECCCcHHHH
Confidence            456666777664    4554432         468999999998877765533           6788888888886665


Q ss_pred             HH----HHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144          190 KA----AQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW  265 (502)
Q Consensus       190 ~a----a~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~  265 (502)
                      ..    ....|+   ++..++.+       +.+.|++++++++      .+|+++.++|++|.+.||++|+++|+++|++
T Consensus       115 ~l~~~~l~~~Gi---~v~~v~~~-------~~e~l~~~l~~~T------klV~lespsNPtg~v~dl~~I~~la~~~g~~  178 (394)
T PRK09028        115 DLCDKILKGFGI---ETTYYDPM-------IGEGIRELIRPNT------KVLFLESPGSITMEVQDVPTLSRIAHEHDIV  178 (394)
T ss_pred             HHHHHhhhhcce---EEEEECCC-------CHHHHHHhcCcCc------eEEEEECCCCCCCcHHHHHHHHHHHHHcCCE
Confidence            43    344677   77776532       4577888886544      3899999999999999999999999999999


Q ss_pred             EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcc-eEEEeeCchhhhhhhcCCcccccCccCCCCCcccc
Q 037144          266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDC-CCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQE  344 (502)
Q Consensus       266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~-g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~  344 (502)
                      ++||.+|+.+...-| ...      +||.+..+.|||++++.+. +.+++.++..... +.....++             
T Consensus       179 lvvD~t~a~p~~~~P-l~~------GaDivv~S~tK~l~Gh~d~~~G~~~~~~~~~~~-l~~~~~~~-------------  237 (394)
T PRK09028        179 VMLDNTWASPINSRP-FEM------GVDISIQAATKYIVGHSDVMLGTATANEKHWDQ-LREHSYLM-------------  237 (394)
T ss_pred             EEEECCccccccCCc-ccc------CceEEEEeCCeEecCCCCEEEEEEECCHHHHHH-HHHHHHhc-------------
Confidence            999999987653322 221      8999999999999887432 2234455433221 11000011             


Q ss_pred             cCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144          345 VGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA  402 (502)
Q Consensus       345 ~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~  402 (502)
                                +.-..+...|..++  |.+-+.-+++++.++|..+.+.|+++|.++-+
T Consensus       238 ----------G~~~~p~~a~l~~r--gl~TL~lR~~~~~~na~~la~~L~~~p~v~~V  283 (394)
T PRK09028        238 ----------GQCTSPDDVYLAMR--GLRTLGVRLAQHEKNALKVANWLATRPEVDHV  283 (394)
T ss_pred             ----------CCCCCHHHHHHHHc--ccCcHHHHHHHHHHHHHHHHHHHhcCCCccEE
Confidence                      11225567776665  56778899999999999999999999987643

>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic

Probab=99.78  E-value=5.3e-17  Score=164.76  Aligned_cols=212  Identities=13%  Similarity=0.155  Sum_probs=150.1

Q ss_pred             HHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHH----HHHH
Q 037144          119 NIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQK----AAQI  194 (502)
Q Consensus       119 ~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~----aa~~  194 (502)
                      .++.+.+++++|.+         ..+++++|+.|+..++. ..    +       +++.|+++...|.+..+    .+..
T Consensus        50 ~~le~~la~l~g~~---------~~l~~~sG~~al~~~l~-ll----~-------~Gd~Vl~~~~~y~~~~~~~~~~~~~  108 (378)
T TIGR01329        50 TALESLLAKLDKAD---------RAFAFSSGMAALDVITR-LL----N-------NGDEIIAGDDLYGGTDRLLTQVVPR  108 (378)
T ss_pred             HHHHHHHHHHhCCC---------cEEEECCHHHHHHHHHH-Hh----C-------CCCEEEEcCCCchHHHHHHHHHHHH
Confidence            34556688888874         35777777766543332 21    1       67788888888876544    4556


Q ss_pred             cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccccc
Q 037144          195 VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAG  274 (502)
Q Consensus       195 ~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~  274 (502)
                      .|+   +++.++++       |++++++++++++      .+|+++.++|++|.+.|+++|+++|+++|++++||++++.
T Consensus       109 ~G~---~v~~vd~~-------d~~~le~~i~~~t------klv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~  172 (378)
T TIGR01329       109 SGV---VVVHVDTT-------DLDKVKAALGPKT------KLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMS  172 (378)
T ss_pred             cCc---EEEEeCCC-------CHHHHHHhcCcCc------eEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcc
Confidence            788   88888752       7899999987543      3899999999999999999999999999999999999966


Q ss_pred             ccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccc
Q 037144          275 SACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQI  352 (502)
Q Consensus       275 ~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~  352 (502)
                      +....+ ...      ++|+++.++|||+++|.+  .|+++++++.......    .+....                  
T Consensus       173 ~~~~~~-l~~------g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~----~~~~~~------------------  223 (378)
T TIGR01329       173 PLLCNP-LEL------GADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVY----FLQNST------------------  223 (378)
T ss_pred             cccCCh-hhc------CCcEEEEecceeccCCccceeEEEEeCcHHHHHHHH----HHHHhc------------------
Confidence            543222 111      789999999999998876  7888787654322111    111000                  


Q ss_pred             cCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 037144          353 TLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFE  400 (502)
Q Consensus       353 ~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~  400 (502)
                        +....+...|..++  +.+.+..++++...++..+.+.|++.|.+.
T Consensus       224 --G~~~~~~~a~l~~~--~l~tl~~R~e~~~~na~~la~~L~~~~~v~  267 (378)
T TIGR01329       224 --GSGLAPFDCWLLLR--GIKTLAIRIEKQQENARAIAMFLSTHPRVK  267 (378)
T ss_pred             --CCcCCHHHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence              00112334454443  557788899999999999999999988764

This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.

>PRK08776 cystathionine gamma-synthase; Provisional

Probab=99.78  E-value=1.4e-16  Score=162.69  Aligned_cols=213  Identities=15%  Similarity=0.145  Sum_probs=150.1

Q ss_pred             HHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh----HHHHHHHcC
Q 037144          121 VMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA----FQKAAQIVG  196 (502)
Q Consensus       121 ~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s----~~~aa~~~G  196 (502)
                      +.+.++++.|.+         ..+++++|++|+.+++.+...           +++.|+++...|..    +...+...|
T Consensus        65 Le~~lA~l~g~~---------~~v~~~sG~~Ai~~~l~all~-----------pGD~Vvv~~p~Y~~t~~~~~~~~~~~g  124 (405)
T PRK08776         65 LGEALAELEGGA---------GGVITATGMGAINLVLNALLQ-----------PGDTLVVPHDAYGGSWRLFNALAKKGH  124 (405)
T ss_pred             HHHHHHHHhCCC---------ceEEEcCHHHHHHHHHHHHhC-----------CCCEEEEccCCchHHHHHHHHHHHhcC
Confidence            445577888864         357888888887665554422           67778888778765    333445556


Q ss_pred             CCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccccccc
Q 037144          197 IDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSA  276 (502)
Q Consensus       197 lg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~  276 (502)
                      +   +++.++.       .|+++|++++++++      .+|+++.++|++|.+.|+++|+++|+++|++++||++|+.+.
T Consensus       125 ~---~v~~v~~-------~d~~~l~~~i~~~t------klV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~a~~~  188 (405)
T PRK08776        125 F---ALITADL-------TDPRSLADALAQSP------KLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLSPA  188 (405)
T ss_pred             c---EEEEECC-------CCHHHHHHhcCcCC------eEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCCcccc
Confidence            6   6776653       37899998886543      378889999999999999999999999999999999997654


Q ss_pred             ccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccC
Q 037144          277 CICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITL  354 (502)
Q Consensus       277 ~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~  354 (502)
                      ...| ..      .++|.++.++||++++|.+  .|+++.+++..... +.....+.                       
T Consensus       189 ~~~p-l~------~gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~-l~~~~~~~-----------------------  237 (405)
T PRK08776        189 LQKP-LE------FGADLVLHSTTKYINGHSDVVGGAVVARDAELHQQ-LVWWANAL-----------------------  237 (405)
T ss_pred             cCCc-cc------ccCCEEEecCceeecCCCCceEEEEEeCCHHHHHH-HHHHHHhc-----------------------
Confidence            3211 11      2789999999999998754  56666666543222 11100000                       


Q ss_pred             CCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144          355 CRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA  402 (502)
Q Consensus       355 sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~  402 (502)
                      +-...++..|..++  |.+.+..++++..+++..+.+.|++.|.++-+
T Consensus       238 g~~~s~~~a~l~~~--gl~tl~~r~~~~~~na~~la~~L~~~p~v~~V  283 (405)
T PRK08776        238 GLTGSPFDAFLTLR--GLRTLDARLRVHQENADAIAALLDGHAAVNQV  283 (405)
T ss_pred             CCCCCHHHHHHHHh--hhCcHHHHHHHHHHHHHHHHHHHHcCCCeeEE
Confidence            00124566676664  56788999999999999999999999988643

>PLN02368 alanine transaminase

Probab=99.78  E-value=2e-16  Score=161.63  Aligned_cols=281  Identities=9%  Similarity=-0.013  Sum_probs=189.5

Q ss_pred             HHHHHHHHHHhhc--CCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHH
Q 037144           89 VAGIVGEMLSSGF--NVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLK  166 (502)
Q Consensus        89 ~~~~~~~~l~~~~--n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~  166 (502)
                      ++..+.+.+....  +.....|....+..++.+.+.+|+.+.+|++-+.     ...++|+|+++++..++.+....   
T Consensus        82 p~~~i~~a~~~l~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~-----~~I~it~Ga~~al~~~~~~l~~~---  153 (407)
T PLN02368         82 PADAIARAKHYLSLTSGGLGAYSDSRGLPGVRKEVAEFIERRDGYPSDP-----ELIFLTDGASKGVMQILNAVIRG---  153 (407)
T ss_pred             CHHHHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCh-----hhEEEcccHHHHHHHHHHHHcCC---
Confidence            4566666654422  2223457666677889999999999988864221     26899999999987776655411   


Q ss_pred             HhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccc
Q 037144          167 KIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAI  246 (502)
Q Consensus       167 ~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~  246 (502)
                             +++.|++..+++..+...++..|.   +++.+|++.+++|.+|+++|++++++...++.++.+|+++.++|+|
T Consensus       154 -------pGd~Vli~~P~Y~~y~~~~~~~g~---~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPT  223 (407)
T PLN02368        154 -------EKDGVLVPVPQYPLYSATISLLGG---TLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPT  223 (407)
T ss_pred             -------CCCEEEEeCCCCccHHHHHHHcCC---EEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCC
Confidence                   678888999999999999999999   9999999865568999999999998643333345678888999999


Q ss_pred             ccc---CChhHHHHHHHHhCCEEEeecccccccccCc-cc---hhhhcCC----C-CCCeeE-EccCCcC-C-CCCcceE
Q 037144          247 TAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICP-EF---RHFIDGV----E-CVDSFS-FNPHKWL-F-TTLDCCC  311 (502)
Q Consensus       247 G~i---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~-~~---~~~~~~~----~-~aDsi~-~~~hK~l-~-~p~~~g~  311 (502)
                      |.+   +.+++|+++|++||+|+++|.+|+...+... .+   ......+    + ....++ .+++|.+ + ....+|+
T Consensus       224 G~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy  303 (407)
T PLN02368        224 GQCLSEANLREILKFCYQERLVLLGDEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGY  303 (407)
T ss_pred             CccCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEE
Confidence            999   4577788889999999999999977654221 11   1111111    1 112444 5689997 3 5677888


Q ss_pred             EEe--eCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc-----H-------HHHHH
Q 037144          312 LWV--KDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG-----V-------ANLRN  377 (502)
Q Consensus       312 ~~~--r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-----~-------~g~~~  377 (502)
                      +++  .++..+.......  ....                       ....+..+++...+.     .       +...+
T Consensus       304 ~i~~~~~~~li~~~~~~~--~~~~-----------------------~~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~  358 (407)
T PLN02368        304 FEMTNIPPKTVEEIYKVA--SIAL-----------------------SPNVSGQIFMGLMVNPPKPGDISYDQFVRESKG  358 (407)
T ss_pred             EEEeCCCHHHHHHHHHHh--cccC-----------------------CCCcHHHHHHHHHhCCCCCCCccHHHHHHHHHH
Confidence            875  3443333221111  0000                       012344444444442     1       11234


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEE
Q 037144          378 FIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFR  413 (502)
Q Consensus       378 ~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~  413 (502)
                      +++.+.++++.+.+.|+++||+.+. +|+.+++.|.
T Consensus       359 ~~~~~~~rr~~~~~~L~~~~g~~~~-~P~Gafy~~~  393 (407)
T PLN02368        359 ILESLRRRARMMTDGFNSCKNVVCN-FTEGAMYSFP  393 (407)
T ss_pred             HHHHHHHHHHHHHHHHhCCCCeEeC-CCCeeeEecc
Confidence            6778888999999999999999875 6777777774

>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.77  E-value=7.9e-17  Score=165.59  Aligned_cols=241  Identities=15%  Similarity=0.145  Sum_probs=160.6

Q ss_pred             cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh--
Q 037144          110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA--  187 (502)
Q Consensus       110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s--  187 (502)
                      ..|....+|+.    ++++.|.+         ..++++||+.|+..++.....           +++.|+++...|..  
T Consensus        62 ~~p~~~~Le~~----lA~leg~~---------~al~~~sG~~Ai~~al~~ll~-----------~GD~Vlv~~~~y~~t~  117 (431)
T PRK08248         62 MNPTTDVFEKR----IAALEGGI---------GALAVSSGQAAITYSILNIAS-----------AGDEIVSSSSLYGGTY  117 (431)
T ss_pred             CCchHHHHHHH----HHHHhCCC---------cEEEECCHHHHHHHHHHHHhC-----------CCCEEEEccCchhhHH
Confidence            45655666655    77887754         368999999998877765532           67788888877753  


Q ss_pred             --HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144          188 --FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW  265 (502)
Q Consensus       188 --~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~  265 (502)
                        +...++..|+   +++.++.       .|+++|+++|++.+      .+|+++.++|++|.+-|+++|+++|+++|++
T Consensus       118 ~~~~~~~~~~Gv---~v~~vd~-------~d~e~l~~ai~~~t------klV~l~sp~NPtG~v~di~~I~~la~~~gi~  181 (431)
T PRK08248        118 NLFAHTLPKLGI---TVKFVDP-------SDPENFEAAITDKT------KALFAETIGNPKGDVLDIEAVAAIAHEHGIP  181 (431)
T ss_pred             HHHHHHHHhCCE---EEEEECC-------CCHHHHHHhcCCCC------eEEEEECCCCCCCcccCHHHHHHHHHHcCCE
Confidence              3345677888   8888875       27899999886543      3788889999999999999999999999999


Q ss_pred             EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-cceEEEeeCchhh-hh------hhcCCcccccCccCC
Q 037144          266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-DCCCLWVKDPSCL-LS------TLSTNPQYLKNEATD  337 (502)
Q Consensus       266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l-~~------~~~~~~~yl~~~~~~  337 (502)
                      ++||++++......| ..      .++|.++.+.|||+++|. ..|.+++.+.... ..      ..+..+.|.......
T Consensus       182 vIvD~t~a~~~~~~p-l~------~gaDivv~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (431)
T PRK08248        182 LIVDNTFASPYLLRP-IE------HGADIVVHSATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYTD  254 (431)
T ss_pred             EEEeCCCCccccCCh-hH------cCCCEEEEcCccccCCCCCceEEEEEeCCccccccccccccccCCccccccchhhh
Confidence            999999975443322 11      189999999999999875 3666666433211 00      000011110000000


Q ss_pred             CCCcccccC-----CCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144          338 QEPKEQEVG-----YKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA  402 (502)
Q Consensus       338 ~~~~~~~~~-----~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~  402 (502)
                         ..+...     ...+....+....+...|..++  |.+-+..+++++.++|..+.+.|+++|+++-+
T Consensus       255 ---~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~r--gl~tl~~R~~~~~~nA~~la~~L~~~p~v~~V  319 (431)
T PRK08248        255 ---AVGEAAYITKARVQLLRDLGAALSPFNSFLLLQ--GLETLHLRMERHSENALAVAKFLEEHEAVEWV  319 (431)
T ss_pred             ---hhchhhHHHHHHHHHHHhcCCCCCHHHHHHHhc--CcCcHHHHHHHHHHHHHHHHHHHHhCCCcceE
Confidence               000000     0000111233345566676655  66778899999999999999999999998743

>PRK07050 cystathionine beta-lyase; Provisional

Probab=99.77  E-value=1.1e-16  Score=163.25  Aligned_cols=221  Identities=14%  Similarity=0.119  Sum_probs=158.4

Q ss_pred             cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144          110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ  189 (502)
Q Consensus       110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~  189 (502)
                      ..|...++|+    .++++.|.+         .+++++||++|+..++.+...           +++.|+++...|.+..
T Consensus        63 ~~pt~~~Le~----~lA~l~g~~---------~~l~~~sgt~Ai~~~l~al~~-----------~GD~Vl~~~~~y~~~~  118 (394)
T PRK07050         63 ATPTSLALAQ----RLAEIEGGR---------HALLQPSGLAAISLVYFGLVK-----------AGDDVLIPDNAYGPNR  118 (394)
T ss_pred             CCHHHHHHHH----HHHHHhCCC---------eEEEeccHHHHHHHHHHHHhC-----------CCCEEEEecCCcccHH
Confidence            4455555554    577887753         478999999999888776633           6788999988887644


Q ss_pred             ----HHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144          190 ----KAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW  265 (502)
Q Consensus       190 ----~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~  265 (502)
                          ..+..+|+   +++.++..       +.++|++++++++      .+|+++.++|++|.+.|+++|+++|+++|++
T Consensus       119 ~~~~~~~~~~Gi---~v~~vd~~-------~~~~l~~~i~~~t------klV~le~p~Np~~~~~di~~I~~ia~~~gi~  182 (394)
T PRK07050        119 DHGEWLARDFGI---TVRFYDPL-------IGAGIADLIQPNT------RLIWLEAPGSVTMEVPDVPAITAAARARGVV  182 (394)
T ss_pred             HHHHHHHHhcCe---EEEEECCC-------CHHHHHHhcCCCC------eEEEEECCCCCCccHhhHHHHHHHHHHcCCE
Confidence                35667788   88887642       4467888876544      4888999999999999999999999999999


Q ss_pred             EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCccc
Q 037144          266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQ  343 (502)
Q Consensus       266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~  343 (502)
                      +++|++|+.+...-+ ..      .++|.++.+.+|++++..+  .|++++++++...... ....++..          
T Consensus       183 livD~a~a~~~~~~~-l~------~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~-~~~~~~G~----------  244 (394)
T PRK07050        183 TAIDNTYSAGLAFKP-FE------HGVDISVQALTKYQSGGSDVLMGATITADAELHAKLK-LARMRLGI----------  244 (394)
T ss_pred             EEEECCcccccccCH-HH------cCCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHH-HHHHhcCC----------
Confidence            999999977654322 11      1689999999999976654  5666666654432221 11111110          


Q ss_pred             ccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q 037144          344 EVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAF  403 (502)
Q Consensus       344 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~  403 (502)
                                   ...+...|.+++  |.+.+..++++..+++.++.+.|++.|+++-+.
T Consensus       245 -------------~~~~~~a~l~lr--~l~tl~~Rl~~~~~~a~~la~~L~~~p~v~~v~  289 (394)
T PRK07050        245 -------------GVSADDCSLVLR--GLPSLQVRLAAHDRSALEVAEWLKARPEIATVL  289 (394)
T ss_pred             -------------CCCHHHHHHHHc--CCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEE
Confidence                         113455676665  456677799999999999999999998877543

>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.77  E-value=1.5e-16  Score=163.36  Aligned_cols=244  Identities=12%  Similarity=0.097  Sum_probs=157.5

Q ss_pred             cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144          110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ  189 (502)
Q Consensus       110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~  189 (502)
                      ..|....+|+    .++++.|.+.         ++++++|+.|+..++.+...           +++.|+++...|.+..
T Consensus        67 ~~p~~~~Le~----~lA~l~g~~~---------av~~sSG~aAi~~al~all~-----------~Gd~Vv~~~~~y~~t~  122 (436)
T PRK07812         67 MNPTQDVVEQ----RIAALEGGVA---------ALLLASGQAAETFAILNLAG-----------AGDHIVSSPRLYGGTY  122 (436)
T ss_pred             CCchHHHHHH----HHHHHhCCCe---------EEEEccHHHHHHHHHHHHhC-----------CCCEEEEeCCcchHHH
Confidence            3455555655    4778888653         68888999998777765432           5777888877776654


Q ss_pred             HH----HHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144          190 KA----AQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW  265 (502)
Q Consensus       190 ~a----a~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~  265 (502)
                      ..    +...|+   +++.++ +.     .|+++++++|++++      .+|++..++|++|.+.|+++|+++|+++|++
T Consensus       123 ~~~~~~l~~~Gi---~v~~vd-d~-----~d~e~l~~ai~~~t------klV~ie~~sNp~G~v~Dl~~I~~la~~~gi~  187 (436)
T PRK07812        123 NLFHYTLPKLGI---EVSFVE-DP-----DDLDAWRAAVRPNT------KAFFAETISNPQIDVLDIPGVAEVAHEAGVP  187 (436)
T ss_pred             HHHHHHhhcCeE---EEEEEC-CC-----CCHHHHHHhCCCCC------eEEEEECCCCCCCeecCHHHHHHHHHHcCCE
Confidence            33    334666   777775 22     28999999887544      3888999999999999999999999999999


Q ss_pred             EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc-ceEEEeeCch-hhhh-----hhcCCcccccCccCCC
Q 037144          266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD-CCCLWVKDPS-CLLS-----TLSTNPQYLKNEATDQ  338 (502)
Q Consensus       266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~-~g~~~~r~~~-~l~~-----~~~~~~~yl~~~~~~~  338 (502)
                      ++||++++.+....+ ..      .++|.++.++||+++++.+ .|.+++.+.. ....     ..+.+++|........
T Consensus       188 liVD~t~a~~~~~~p-l~------~GaDivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (436)
T PRK07812        188 LIVDNTIATPYLIRP-LE------HGADIVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAEL  260 (436)
T ss_pred             EEEECCCcccccCCc-hh------cCCCEEEEecccccCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhhc
Confidence            999999977554322 11      2899999999999986632 4555553321 1000     0011111211000000


Q ss_pred             CCccccc-CCC-cccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144          339 EPKEQEV-GYK-DWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA  402 (502)
Q Consensus       339 ~~~~~~~-~~~-~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~  402 (502)
                      . ..... ... .+....+-...+...|..++  |.+.+..++++..++|..+.+.|+++|+++-+
T Consensus       261 ~-~~~~~~~~~~~~~~~~G~~l~p~~a~l~~r--gl~tL~~R~~~~~~nA~~la~~L~~~p~v~~V  323 (436)
T PRK07812        261 G-PPAYALKARVQLLRDLGSAISPFNAFLIAQ--GLETLSLRIERHVANAQRVAEFLEARDEVASV  323 (436)
T ss_pred             c-hhHHHHHHHHHHHHhcCCCCCHHHHHHHhc--CcCcHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence            0 00000 000 00111233345566665554  66888999999999999999999999988644

>PRK08064 cystathionine beta-lyase; Provisional

Probab=99.77  E-value=1.1e-16  Score=163.23  Aligned_cols=217  Identities=15%  Similarity=0.181  Sum_probs=152.2

Q ss_pred             cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh--
Q 037144          110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA--  187 (502)
Q Consensus       110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s--  187 (502)
                      ..|...++|+    .++++.|.+.         .+++++|+.++..++. ...           +++.|+++...|.+  
T Consensus        52 ~~p~~~~le~----~lA~l~g~~~---------~v~~~sG~~ai~~~l~-~l~-----------~Gd~Vlv~~~~y~~~~  106 (390)
T PRK08064         52 GNPTREALED----IIAELEGGTK---------GFAFASGMAAISTAFL-LLS-----------KGDHVLISEDVYGGTY  106 (390)
T ss_pred             CChhHHHHHH----HHHHHhCCCC---------eEEECCHHHHHHHHHH-HhC-----------CCCEEEEccCccchHH
Confidence            4455555554    4778888763         3566777777654443 221           56778888887763  


Q ss_pred             --HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144          188 --FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW  265 (502)
Q Consensus       188 --~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~  265 (502)
                        +.+.++..|+   +++.++.+       |+++++++++++++      +|+++.++|++|.+.|+++|.++|+++|++
T Consensus       107 ~~~~~~~~~~G~---~v~~v~~~-------d~~~l~~~l~~~tk------lV~l~~p~NptG~~~dl~~I~~la~~~g~~  170 (390)
T PRK08064        107 RMITEVLSRFGI---EHTFVDMT-------NLEEVAQNIKPNTK------LFYVETPSNPLLKVTDIRGVVKLAKAIGCL  170 (390)
T ss_pred             HHHHHHHHHcCC---EEEEECCC-------CHHHHHHhcCCCce------EEEEECCCCCCcEeccHHHHHHHHHHcCCE
Confidence              3355667898   99998863       68889988865543      889999999999999999999999999999


Q ss_pred             EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCccc
Q 037144          266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQ  343 (502)
Q Consensus       266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~  343 (502)
                      ++||++|+.+....+.  ..     ++|.++.++||++++|.+  .|+++++++........    +...          
T Consensus       171 vvvD~a~~~~~~~~~~--~~-----g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~----~~~~----------  229 (390)
T PRK08064        171 TFVDNTFLTPLLQKPL--DL-----GADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYF----LQNS----------  229 (390)
T ss_pred             EEEECCCCcccccCch--hh-----CCcEEEeecceeccCCccceeEEEEeCCHHHHHHHHH----HHHh----------
Confidence            9999999776443221  11     789999999999988876  57777776544322110    0000          


Q ss_pred             ccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 037144          344 EVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFE  400 (502)
Q Consensus       344 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~  400 (502)
                                .+....+...|..+  .|.+-+..++++..+++..+.+.|++.|.+.
T Consensus       230 ----------~g~~~~~~~a~l~~--~gl~tl~~R~~~~~~~a~~la~~L~~~~~v~  274 (390)
T PRK08064        230 ----------FGAVLGVQDCWLVL--RGLKTLHVRLEHSSETANKIALYLQEHPKVQ  274 (390)
T ss_pred             ----------cCCCCCHHHHHHHH--cccCcHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence                      01111334556544  3556677899999999999999999988664

>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1

Probab=99.77  E-value=2.3e-16  Score=157.92  Aligned_cols=369  Identities=12%  Similarity=0.096  Sum_probs=185.2

Q ss_pred             chhHhhcCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCcccccCCCCCCHHHHHHHHHHh---hcCCC-CcccccChh
Q 037144           38 PGYLKKRLPESAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSS---GFNVV-GLDWISSPA  113 (502)
Q Consensus        38 ~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~---~~n~~-~~~~~~~p~  113 (502)
                      |++++..-+..+|+. .|..++++++.++...+..   ...|+|--...--.|+++.+.+.+   ++..+ .+.-+.+-+
T Consensus        32 P~~i~~~~~~~lp~~-~sE~e~~r~~~~la~kN~~---~~~fiG~G~y~~~~P~~i~~~i~~~~ef~TaYtPYQpEisQG  107 (429)
T PF02347_consen   32 PEEIRLKKPLNLPEP-LSEYELLRHLERLASKNKS---YTSFIGAGSYTHYVPAVIDRNILSRPEFYTAYTPYQPEISQG  107 (429)
T ss_dssp             -GGG-SS-----------HHHHHHHHHHHHTTS-----TTS---CTTT-----HHHHH-HHCCHHCCCS-STTSGGGBHH
T ss_pred             CHhhcCCCCCCCCCC-CCHHHHHHHHHHHHhcCCC---CCccccccccCceeChhhcCccccChhhhccCCCCCcHHHHH
Confidence            666655445667763 8999999999998776654   445666444445567777662322   22221 112233445


Q ss_pred             hHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHH-
Q 037144          114 AVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAA-  192 (502)
Q Consensus       114 ~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa-  192 (502)
                      .-+.--+...+++++.|++..       +..+..++|.+- .|+..+.... ++      .+.+|+++...|+.....+ 
T Consensus       108 ~Lq~lfe~Qs~i~eLTGmdva-------NaSlyd~atA~a-Ea~~ma~r~~-~~------~~~~vlv~~~~hP~~~~v~~  172 (429)
T PF02347_consen  108 RLQALFEYQSMICELTGMDVA-------NASLYDGATAAA-EAMLMAVRAT-KR------KRNKVLVPESLHPQTRAVLR  172 (429)
T ss_dssp             HHHHHHHHHHHHHHHHTSSEE--------SEBSSCCHHHH-HHHHHHHHHH-TT---------EEEEETTS-CHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhCCCcc-------CCCCCChhHHHH-HHHHHHHHhc-cc------CCcEEEEcCCcChhhHHHHH
Confidence            555555666999999999853       234445555332 2333332211 10      2357889999998776644 


Q ss_pred             ---HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEee
Q 037144          193 ---QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVD  269 (502)
Q Consensus       193 ---~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVD  269 (502)
                         ...|+   +++.+|.+++  +..|        .++      ...|+++.|+ ..|.++++++|++++|++|..+++ 
T Consensus       173 t~a~~~g~---~iv~~~~~~~--~~~d--------~~~------~a~v~vq~Pn-~~G~~ed~~~i~~~~h~~gal~~~-  231 (429)
T PF02347_consen  173 TYAAPLGI---EIVEVPLDED--GTTD--------DDD------TAAVMVQNPN-TFGVFEDIKEIADIAHAAGALVIV-  231 (429)
T ss_dssp             HHCCHCCE---EEEEE-BBTT--CSB---------STT------EEEEEEESS--TTSB--THHHHHHHHHHTT-EEEE-
T ss_pred             HhhhhCCe---EEEEeccccc--CCcc--------ccC------eEEEEeecCC-CCceEeeHHHHHHHHHHcCCEEEE-
Confidence               34677   8999998753  3556        222      4578888876 689998899999999999999887 


Q ss_pred             cccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-----cceEEEeeCchhhhhhhcCCcccccCccCCCCCcccc
Q 037144          270 AAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-----DCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQE  344 (502)
Q Consensus       270 aA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-----~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~  344 (502)
                      +|-.-...........     +||.+ ++-||.|+.|.     ++|++.+|+.  +.   ...|..+.....+   ..+.
T Consensus       232 ~ad~~aL~~l~~Pge~-----GADI~-vg~~Q~fg~p~~~GGP~~G~~a~~~~--l~---r~lPGRiVG~t~D---~~G~  297 (429)
T PF02347_consen  232 GADPNALGGLKSPGEY-----GADIV-VGEHQTFGIPMGFGGPGAGFFAVRED--LV---RQLPGRIVGQTKD---ADGK  297 (429)
T ss_dssp             CGGCCGCCTC--GGGG-----T-SEE-EECCTTTT---CCC-S--EEEEE-GG--GG---GGS-S-EEEEEEB---CCCS
T ss_pred             ecCHHHHhCcCChhhc-----CccEE-eeCCCCCcccCCCCCCCeeeEEEhhh--hh---hhCCCceeccccc---cccc
Confidence            6653333333222333     89999 66699988774     4677888765  22   2234444322211   1121


Q ss_pred             cCCCcccccC----CCCCC------------chHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCee
Q 037144          345 VGYKDWQITL----CRRFR------------SLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFS  408 (502)
Q Consensus       345 ~~~~~~~~~~----sr~~~------------al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~  408 (502)
                      ..+. .+++.    -||-.            ++..+..+..+|.+|++++.++...+|+|+.++|.+..++.+. .+.+.
T Consensus       298 ~~~~-ltLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~~~~-~~~f~  375 (429)
T PF02347_consen  298 RAFV-LTLQTREQHIRREKATSNICTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKIYGLPFD-NPFFF  375 (429)
T ss_dssp             CCEE-EE-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTBECSS-SSSBS
T ss_pred             ceee-eccccccccccccchhhhhhhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccC-CCCce
Confidence            1111 11111    12211            1344556667899999999999999999999999987333332 33332


Q ss_pred             EEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHH
Q 037144          409 LVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHV  488 (502)
Q Consensus       409 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di  488 (502)
                      -+.+...+.                           .. ..+|.++....|   +...... ...+-+|++.. ++++||
T Consensus       376 e~v~~~~~~---------------------------~~-~~~l~~~~~~~g---l~~~~~~-~~~~li~~TE~-~t~edi  422 (429)
T PF02347_consen  376 EFVVVFSKD---------------------------KE-VEELLKRGIEGG---LNLRYPD-DGALLICVTET-RTKEDI  422 (429)
T ss_dssp             SEEEEESS----------------------------HH-HHHHHHTT-------EEEGGG--SSEEEEE--TT---HHHH
T ss_pred             eeeeecCCc---------------------------HH-HHHHHHHHHhcC---CCccccC-CCeEEEEccCC-CCHHHH
Confidence            222222211                           11 123566555555   2222112 22788998754 566799


Q ss_pred             HHHHHHH
Q 037144          489 RAAWTVV  495 (502)
Q Consensus       489 ~~~~~~l  495 (502)
                      |++++++
T Consensus       423 d~lv~~f  429 (429)
T PF02347_consen  423 DRLVEAF  429 (429)
T ss_dssp             HHHHH--
T ss_pred             HHHHhcC
Confidence            9999864

4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.

>PRK02610 histidinol-phosphate aminotransferase; Provisional

Probab=99.77  E-value=8.5e-16  Score=156.41  Aligned_cols=319  Identities=11%  Similarity=0.049  Sum_probs=197.6

Q ss_pred             HHHHHHHHHhhcCCC--CcccccChhhHHHHHHHHHHHHHhcC----CCCccCcCCCCcEEEcCCchHHHHHHHHHHHHH
Q 037144           90 AGIVGEMLSSGFNVV--GLDWISSPAAVELENIVMDWLGQMLD----LPKSFLFSGNGGGVIQGTTCEALLCTLTAARDR  163 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~--~~~~~~~p~~~~le~~~~~~l~~l~g----~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~  163 (502)
                      |..+.+.+...++.+  ...|. .++..++.+.+++|+.+.+|    ++.+       ..++|+|+++++..++.+....
T Consensus        43 ~~~~~~~~~~~~~~~~~~~~Y~-~~G~~~Lr~aia~~~~~~~~~~~~v~~~-------~I~it~Ga~~al~~~~~~~~~~  114 (374)
T PRK02610         43 PPDLKQKLAWLYQQGIESNRYP-DGGHEALKQAIAEYVNESAAGSSQITPA-------NISVGNGSDELIRSLLIATCLG  114 (374)
T ss_pred             CHHHHHHHHHHHhhcccccCCC-CCchHHHHHHHHHHhCccccccCCCCHH-------HEEEcCChHHHHHHHHHHHcCC
Confidence            344555555544432  23453 35678888888888887753    3332       5889999999886555543321


Q ss_pred             HHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCC
Q 037144          164 VLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGT  243 (502)
Q Consensus       164 ~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gt  243 (502)
                                ++..|++..+++..+..+++.+|+   +++.+|++. +++.+|+++|++++++..  ..++.+|+++.++
T Consensus       115 ----------g~~~Vlv~~P~y~~~~~~~~~~g~---~~~~~~~~~-~~~~~d~~~l~~~~~~~~--~~~~k~i~l~~P~  178 (374)
T PRK02610        115 ----------GEGSILVAEPTFSMYGILAQTLGI---PVVRVGRDP-ETFEIDLAAAQSAIEQTQ--NPPVRVVFVVHPN  178 (374)
T ss_pred             ----------CCCeEEEcCCChHHHHHHHHHcCC---EEEEecCCc-ccCCCCHHHHHHHHHhhc--CCCceEEEEeCCC
Confidence                      223688888899999999999999   999999864 357999999999986421  1124478888899


Q ss_pred             ccccccCChhHHHHHHHH-hCCEEEeecccccccccCccchhhhcCCCCCC-eeEEccCCcCC-CCCcceEEEeeCchhh
Q 037144          244 TAITAVDPLKPLCDVAKQ-FGIWVHVDAAYAGSACICPEFRHFIDGVECVD-SFSFNPHKWLF-TTLDCCCLWVKDPSCL  320 (502)
Q Consensus       244 t~~G~idpl~eI~~i~~~-~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aD-si~~~~hK~l~-~p~~~g~~~~r~~~~l  320 (502)
                      |+||.+-+.+++.++.+- +++|+++|.+|..+... +... .+..  .-. .+..++.|.++ ....+|+++. ++...
T Consensus       179 NPTG~~~s~~~l~~l~~~~~~~~iI~De~Y~~~~~~-~~~~-~~~~--~~~~ivi~SfSK~~g~~GlRiG~~v~-~~~l~  253 (374)
T PRK02610        179 SPTGNPLTAAELEWLRSLPEDILVVIDEAYFEFSQT-TLVG-ELAQ--HPNWVILRTFSKAFRLAAHRVGYAIG-HPELI  253 (374)
T ss_pred             CCCCCCCCHHHHHHHHhccCCcEEEEeccccccCcc-chHH-HHhc--CCCEEEEEecchhccCcccceeeeec-CHHHH
Confidence            999999777666665431 48999999999765321 1111 1111  112 45567999995 5566787765 44433


Q ss_pred             hhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCe
Q 037144          321 LSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG-VANLRNFIRSHVGMAKLFERLVTSDKRF  399 (502)
Q Consensus       321 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~~~  399 (502)
                      . .+.... ...                  +      ...+...++...++ .+.+.+.+++..+.++.+.+.|++++++
T Consensus       254 ~-~l~~~~-~~~------------------~------~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~  307 (374)
T PRK02610        254 A-VLEKVR-LPY------------------N------LPSFSQLAAQLALEHRQELLAAIPEILQERDRLYQALQELPQL  307 (374)
T ss_pred             H-HHHHhc-CCC------------------C------CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence            2 221111 000                  0      01222233333332 2344445555555677788888888888


Q ss_pred             EEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEec
Q 037144          400 EVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAG  479 (502)
Q Consensus       400 ~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~  479 (502)
                      .+. ++..+.+.++++.. .                           ...++.+.+.+.|..+. +    ...++|++++
T Consensus       308 ~~~-p~~g~f~~~~l~~~-~---------------------------~~~~~~~~l~~~gi~v~-~----~~~~lRls~~  353 (374)
T PRK02610        308 RVW-PSAANFLYLRLSQD-A---------------------------ALAALHQALKAQGTLVR-H----TGGGLRITIG  353 (374)
T ss_pred             EeC-CCcceEEEEeCCCC-C---------------------------CHHHHHHHHHHCCEEEE-e----CCCeEEEeCC
Confidence            754 55555555544321 0                           02356666767786543 2    2358999986


Q ss_pred             CCCCcHHHHHHHHHHHHHHHHh
Q 037144          480 NSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       480 ~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      .    .++++++++.|+++.+.
T Consensus       354 ~----~~~~~~~l~~l~~~l~~  371 (374)
T PRK02610        354 T----PEENQRTLERLQAALTQ  371 (374)
T ss_pred             C----HHHHHHHHHHHHHHHhh
Confidence            2    35789999999887764

>PRK08247 cystathionine gamma-synthase; Reviewed

Probab=99.77  E-value=1.3e-16  Score=161.56  Aligned_cols=232  Identities=16%  Similarity=0.191  Sum_probs=160.2

Q ss_pred             cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh--
Q 037144          110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA--  187 (502)
Q Consensus       110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s--  187 (502)
                      ..|...++|+    .++++.|.+.         .++++||+.|+..++ ....           +++.|+++...+.+  
T Consensus        50 ~~pt~~~le~----~la~l~g~~~---------~~~~~sG~~ai~~~~-~ll~-----------~Gd~Vl~~~~~y~~t~  104 (366)
T PRK08247         50 GNPTRGVLEQ----AIADLEGGDQ---------GFACSSGMAAIQLVM-SLFR-----------SGDELIVSSDLYGGTY  104 (366)
T ss_pred             CCchHHHHHH----HHHHHhCCCc---------EEEEcCHHHHHHHHH-HHhC-----------CCCEEEEecCCcCcHH
Confidence            3445555554    4788888754         478888888775443 2221           56677777777764  


Q ss_pred             --HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144          188 --FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW  265 (502)
Q Consensus       188 --~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~  265 (502)
                        +...+...|+   +++.++.       .|+++|++++++++      .+|+++.++|++|.+.++++|+++|+++|++
T Consensus       105 ~~~~~~~~~~G~---~v~~vd~-------~d~~~l~~~i~~~t------klv~le~P~NP~~~~~dl~~I~~la~~~g~~  168 (366)
T PRK08247        105 RLFEEHWKKWNV---RFVYVNT-------ASLKAIEQAITPNT------KAIFIETPTNPLMQETDIAAIAKIAKKHGLL  168 (366)
T ss_pred             HHHHHHhhccCc---eEEEECC-------CCHHHHHHhcccCc------eEEEEECCCCCCCcHHHHHHHHHHHHHcCCE
Confidence              3345566888   8888764       38899999987644      3888899999999999999999999999999


Q ss_pred             EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCccc
Q 037144          266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQ  343 (502)
Q Consensus       266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~  343 (502)
                      +++|.+|+......| ..      .++|.++.+++|+++++.+  .|++..++..... .+.....+..           
T Consensus       169 lIvD~t~~~~~~~~p-~~------~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~-~~~~~~~~~g-----------  229 (366)
T PRK08247        169 LIVDNTFYTPVLQRP-LE------EGADIVIHSATKYLGGHNDVLAGLVVAKGQELCE-RLAYYQNAAG-----------  229 (366)
T ss_pred             EEEECCCccccccCc-hh------cCCcEEEeecceeccCCCceeeeEEecChHHHHH-HHHHHHHhcC-----------
Confidence            999999966544332 11      2789999999999987644  4555544343322 1111000110           


Q ss_pred             ccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec-CCCeeEEEEEee
Q 037144          344 EVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAF-PRNFSLVCFRVT  415 (502)
Q Consensus       344 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~-~~~~~~v~f~~~  415 (502)
                                  .....+..|.+++  +.+.+..++++..++++.+.+.|+++|++..+. |+..++++|.+.
T Consensus       230 ------------~~~s~~~a~l~~~--~l~tl~~r~~~~~~~a~~l~~~L~~~p~v~~v~~P~~gg~~sf~~~  288 (366)
T PRK08247        230 ------------AVLSPFDSWLLIR--GMKTLALRMRQHEENAKAIAAFLNEQPGVTDVLYPGRGGMLSFRLQ  288 (366)
T ss_pred             ------------CCCChHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEecCCcCcEEEEEEC
Confidence                        0113345566665  345667788889999999999999999988544 447889999764

>PRK08574 cystathionine gamma-synthase; Provisional

Probab=99.77  E-value=1.7e-16  Score=161.26  Aligned_cols=219  Identities=14%  Similarity=0.117  Sum_probs=154.6

Q ss_pred             ccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhH
Q 037144          109 ISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAF  188 (502)
Q Consensus       109 ~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~  188 (502)
                      ...|...++|+.    +++++|.+         ..++++||+.|+..++.+...           +++.|+++...|.+.
T Consensus        50 ~~np~~~~lE~~----lA~l~g~~---------~~l~~~sG~~Ai~~~l~~ll~-----------~GD~Vlv~~~~y~~~  105 (385)
T PRK08574         50 EENPTLRPLEEA----LAKLEGGV---------DALAFNSGMAAISTLFFSLLK-----------AGDRVVLPMEAYGTT  105 (385)
T ss_pred             CCCccHHHHHHH----HHHHhCCC---------cEEEeCCHHHHHHHHHHHHhC-----------CCCEEEEcCCCchhH
Confidence            355666666665    67777764         357888999998877765532           678888999999887


Q ss_pred             HHHHHH---cCCCCCCEEEEecCCCCCcccCHHHHHHHHHH-HHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCC
Q 037144          189 QKAAQI---VGIDRKNIRAIKTTKSSSYGLSAESVLSQINL-DVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGI  264 (502)
Q Consensus       189 ~~aa~~---~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~-~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~  264 (502)
                      ...++.   .|+   +++.++        +|+++|++++++ .+      .+|++..++|++|.+-|+++|+++|+++|+
T Consensus       106 ~~~~~~~~~~g~---~v~~~~--------~d~~~l~~~i~~~~t------klV~ie~p~NPtG~v~dl~~I~~la~~~gi  168 (385)
T PRK08574        106 LRLLKSLEKFGV---KVVLAY--------PSTEDIIEAIKEGRT------KLVFIETMTNPTLKVIDVPEVAKAAKELGA  168 (385)
T ss_pred             HHHHHHhhccCc---EEEEEC--------CCHHHHHHhcCccCc------eEEEEECCCCCCCEecCHHHHHHHHHHcCC
Confidence            666543   455   565542        367889988865 33      378889999999999999999999999999


Q ss_pred             EEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCcc
Q 037144          265 WVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKE  342 (502)
Q Consensus       265 ~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~  342 (502)
                      ++++|++|+.+...-+ ..      .++|.++.++||++++|..  .|++++.++......... ..++           
T Consensus       169 ~livD~t~a~~~~~~~-l~------~GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~-~~~~-----------  229 (385)
T PRK08574        169 ILVVDNTFATPLLYRP-LR------HGADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEW-RRRL-----------  229 (385)
T ss_pred             EEEEECCCCccccCCh-hh------hCCcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHH-HHhc-----------
Confidence            9999999976643222 11      2789999999999988765  355666555432221100 0011           


Q ss_pred             cccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 037144          343 QEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEV  401 (502)
Q Consensus       343 ~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l  401 (502)
                                  +....++..|.+++  |.+-+..++++..+++.++.+.|++.|.++-
T Consensus       230 ------------g~~~~p~~a~l~l~--~l~tL~~R~~~~~~na~~la~~L~~~p~v~~  274 (385)
T PRK08574        230 ------------GTIMQPFEAYLVLR--GLKTLEVRFERQCRNAMAIAEFLSEHPKVAE  274 (385)
T ss_pred             ------------CCCCCHHHHHHHHc--ccCcHHHHHHHHHHHHHHHHHHHHcCCCcCE
Confidence                        11113344555555  4566888999999999999999999998763

>PRK08249 cystathionine gamma-synthase; Provisional

Probab=99.76  E-value=2.4e-16  Score=160.71  Aligned_cols=221  Identities=15%  Similarity=0.146  Sum_probs=155.0

Q ss_pred             ccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhH
Q 037144          109 ISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAF  188 (502)
Q Consensus       109 ~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~  188 (502)
                      ...|...++|+.    ++++.|.+         ..+++++|+.|+..++.+...           +++.|+++...|.+.
T Consensus        61 ~~~p~~~~le~~----lA~l~g~~---------~~i~~ssG~~Ai~~~l~all~-----------~GD~Vi~~~~~y~~~  116 (398)
T PRK08249         61 NTNPTVQAFEEK----VRILEGAE---------AATAFSTGMAAISNTLYTFLK-----------PGDRVVSIKDTYGGT  116 (398)
T ss_pred             CCChHHHHHHHH----HHHHhCCC---------eEEEeCChHHHHHHHHHHhcC-----------CCCEEEEcCCchHHH
Confidence            455655666654    67788864         357788888888776655432           677888998898764


Q ss_pred             H----HHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCC
Q 037144          189 Q----KAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGI  264 (502)
Q Consensus       189 ~----~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~  264 (502)
                      .    ..+...|+   +++.++       ..|+++++++|++++      .+|+++.++|++|.+-|+++|+++|+++|+
T Consensus       117 ~~~~~~~~~~~Gi---~v~~vd-------~~d~e~l~~~i~~~t------klV~ie~p~NPtg~v~dl~~I~~la~~~gi  180 (398)
T PRK08249        117 NKIFTEFLPRMGV---DVTLCE-------TGDHEQIEAEIAKGC------DLLYLETPTNPTLKIVDIERLAAAAKKVGA  180 (398)
T ss_pred             HHHHHHHHhhCCe---EEEEcC-------CCCHHHHHHhcCCCC------eEEEEECCCCCCCccCCHHHHHHHHHHcCC
Confidence            3    34556777   776654       258999999987644      378888999999999999999999999999


Q ss_pred             EEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc-ceEEEeeCchhhhhhhcCCcccccCccCCCCCccc
Q 037144          265 WVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD-CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQ  343 (502)
Q Consensus       265 ~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~-~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~  343 (502)
                      +++||++|+.+....+ ..      .++|.++.+++|+++++.. .|.+++.++.......... ..             
T Consensus       181 ~livD~t~a~~~~~~~-l~------~~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~~-~~-------------  239 (398)
T PRK08249        181 LVVVDNTFATPINQNP-LA------LGADLVIHSATKFLSGHADALGGVVCGSKELMEQVYHYR-EI-------------  239 (398)
T ss_pred             EEEEECCcCccccCCc-hh------hCCCEEeccCceecCCCCCceEEEEECCHHHHHHHHHHH-Hh-------------
Confidence            9999999986543221 11      2789999999999987643 3444555554332211100 00             


Q ss_pred             ccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144          344 EVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA  402 (502)
Q Consensus       344 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~  402 (502)
                                .+-.......|.+++  +.+.+..++++..++++.+.+.|++.|.++-+
T Consensus       240 ----------~g~~~s~~~a~l~l~--~l~tL~~R~~~~~~na~~la~~L~~~p~v~~V  286 (398)
T PRK08249        240 ----------NGATMDPMSAYLILR--GMKTLKLRVRQQQESAMALAKYLQTHPKVEAV  286 (398)
T ss_pred             ----------cCCCCCHHHHHHHHh--CcchHHHHHHHHHHHHHHHHHHHHcCCCeeEE
Confidence                      011124456666665  45777889999999999999999999988744

>PRK08045 cystathionine gamma-synthase; Provisional

Probab=99.76  E-value=2.1e-16  Score=160.58  Aligned_cols=223  Identities=12%  Similarity=0.115  Sum_probs=154.3

Q ss_pred             cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144          110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ  189 (502)
Q Consensus       110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~  189 (502)
                      ..|....+|    ++++++.|.+         ..++++||++++..++.+...           +++.|+++...|.+..
T Consensus        50 ~~pt~~~L~----~~lA~l~g~~---------~~i~~~sg~~Ai~~~l~~l~~-----------~GD~Vl~~~~~y~~~~  105 (386)
T PRK08045         50 GNPTRDVVQ----RALAELEGGA---------GAVLTNTGMSAIHLVTTVFLK-----------PGDLLVAPHDCYGGSY  105 (386)
T ss_pred             CCccHHHHH----HHHHHHhCCC---------eEEEECCHHHHHHHHHHHHcC-----------CCCEEEEcCCCcHHHH
Confidence            344445555    5577777743         478899999888776665432           6778888888887544


Q ss_pred             HH-HHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEe
Q 037144          190 KA-AQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHV  268 (502)
Q Consensus       190 ~a-a~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhV  268 (502)
                      .. ..+.+.+.-++..++       ..|++++++++++++      .+|+++.++|++|.+-|+++|.++|+++|++++|
T Consensus       106 ~~~~~~~~~~gi~v~~vd-------~~d~e~l~~~l~~~t------klV~l~sP~NPtG~v~di~~I~~ia~~~g~~viv  172 (386)
T PRK08045        106 RLFDSLAKRGCYRVLFVD-------QGDEQALRAALAEKP------KLVLVESPSNPLLRVVDIAKICHLAREAGAVSVV  172 (386)
T ss_pred             HHHHHHHhhCCeEEEEeC-------CCCHHHHHHhcccCC------eEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEE
Confidence            32 223322111455543       358899999886543      3788899999999999999999999999999999


Q ss_pred             ecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccC
Q 037144          269 DAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVG  346 (502)
Q Consensus       269 DaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~  346 (502)
                      |++|+.+....| ..      .++|.++.++|||++++.+  .|+++.+++..... +.....++..             
T Consensus       173 Deay~~~~~~~p-l~------~gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~-l~~~~~~~g~-------------  231 (386)
T PRK08045        173 DNTFLSPALQNP-LA------LGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTE-LAWWANNIGV-------------  231 (386)
T ss_pred             ECCCCccccCCc-hh------hCCCEEEeecceeccCCCCceeEEEEeCcHHHHHH-HHHHHHhcCC-------------
Confidence            999977644322 11      1789999999999987765  56666655543221 1111111110             


Q ss_pred             CCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144          347 YKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA  402 (502)
Q Consensus       347 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~  402 (502)
                                ...++..|++++.+  +-+..++++..+++..+.+.|++.|.++-+
T Consensus       232 ----------~~~p~~~~l~~rgl--~tl~~R~~~~~~na~~la~~L~~~p~v~~V  275 (386)
T PRK08045        232 ----------TGGAFDSYLLLRGL--RTLVPRMELAQRNAQAIVKYLQTQPLVKKL  275 (386)
T ss_pred             ----------CCCHHHHHHHHhhh--ccHHHHHHHHHHHHHHHHHHHHcCCCEeEE
Confidence                      12456677777654  568899999999999999999999988644

>PRK06234 methionine gamma-lyase; Provisional

Probab=99.76  E-value=3.3e-16  Score=160.22  Aligned_cols=220  Identities=16%  Similarity=0.199  Sum_probs=155.5

Q ss_pred             cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhH-
Q 037144          110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAF-  188 (502)
Q Consensus       110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~-  188 (502)
                      ..|...++|+.    +++++|.+         ..++++||+.|+..++.+...           +++.|+++...|.+. 
T Consensus        62 ~~p~~~~Le~~----iA~~~g~~---------~~l~~~sG~~Ai~~al~~ll~-----------~Gd~Vl~~~~~y~~~~  117 (400)
T PRK06234         62 GNPTSTEVENK----LALLEGGE---------AAVVAASGMGAISSSLWSALK-----------AGDHVVASDTLYGCTF  117 (400)
T ss_pred             CCccHHHHHHH----HHHHhCCC---------cEEEEcCHHHHHHHHHHHHhC-----------CCCEEEEecCccchHH
Confidence            56777777776    55666653         368899999998776654432           677888888777543 


Q ss_pred             ---HHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh--C
Q 037144          189 ---QKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF--G  263 (502)
Q Consensus       189 ---~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~--g  263 (502)
                         ...++..|+   +++.++.+       |++++++++++.++      +|+++.++|++|.+.|+++|+++|+++  |
T Consensus       118 ~~~~~~~~~~G~---~v~~vd~~-------d~e~l~~~i~~~tk------lI~iesP~NPtG~v~dl~~I~~la~~~~~~  181 (400)
T PRK06234        118 ALLNHGLTRYGV---EVTFVDTS-------NLEEVRNALKANTK------VVYLETPANPTLKVTDIKAISNIAHENNKE  181 (400)
T ss_pred             HHHHHHHhhCCe---EEEEECCC-------CHHHHHHHhccCCe------EEEEECCCCCCCCcCCHHHHHHHHHhcCCC
Confidence               345577888   88888752       78999999976543      888899999999999999999999997  9


Q ss_pred             CEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcC-CcccccCccCCCCC
Q 037144          264 IWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLST-NPQYLKNEATDQEP  340 (502)
Q Consensus       264 ~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~  340 (502)
                      +++++|++|+.+....+ . .     .++|.++.+++|+++++..  .|+++.+ ++... .+.. ...+..        
T Consensus       182 i~livDea~~~~~~~~~-l-~-----~g~Divv~S~sK~l~g~g~~~gG~v~~~-~~~~~-~l~~~~~~~~~--------  244 (400)
T PRK06234        182 CLVFVDNTFCTPYIQRP-L-Q-----LGADVVVHSATKYLNGHGDVIAGFVVGK-EEFIN-QVKLFGIKDMT--------  244 (400)
T ss_pred             CEEEEECCCCchhcCCc-h-h-----hCCcEEEeeccccccCCCCceeEEEEec-HHHHH-HHHHHHHHHhc--------
Confidence            99999999977644322 1 1     1789999999999987653  4666554 33322 2211 001110        


Q ss_pred             cccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144          341 KEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA  402 (502)
Q Consensus       341 ~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~  402 (502)
                                    +-...+...|..++  |.+.+..++++..+++.++.+.|++.|.+.-+
T Consensus       245 --------------g~~l~p~~a~l~~~--~l~tl~~r~~~~~~na~~~a~~L~~~~~V~~V  290 (400)
T PRK06234        245 --------------GSVIGPFEAFLIIR--GMKTLQIRMEKHCKNAMKVAKFLESHPAVEKV  290 (400)
T ss_pred             --------------CCCCCHHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHHcCCCeeEE
Confidence                          11224455566655  44667788899999999999999998887543

>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type

Probab=99.76  E-value=5.3e-17  Score=162.81  Aligned_cols=319  Identities=13%  Similarity=0.067  Sum_probs=203.2

Q ss_pred             ccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh-
Q 037144          109 ISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA-  187 (502)
Q Consensus       109 ~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s-  187 (502)
                      .-+|.+.++-+++.+.|.++++.|++.     .-.++++|||.++-.++......          +++.+++..  .++ 
T Consensus        32 HRs~~F~~i~~e~~~~L~~l~~~~~~~-----~v~~l~GsGT~a~Eaa~~nl~~~----------~g~~vLv~g--~FG~   94 (374)
T TIGR01365        32 HRSKLGKEKLAEAIKKTREMLGVPADY-----LIGIVPASDTGAVEMALWSMLGC----------RGVDVLAWE--SFGK   94 (374)
T ss_pred             cCCHHHHHHHHHHHHHHHHHhCCCCCc-----EEEEECCchHHHHHHHHHHcCCC----------CCCeEEEEC--HHHH
Confidence            457899999999999999999986542     13566999998876665544321          344444442  433 


Q ss_pred             -HH-HHHHHcCCCCCC-EEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCC
Q 037144          188 -FQ-KAAQIVGIDRKN-IRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGI  264 (502)
Q Consensus       188 -~~-~aa~~~Glg~~~-v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~  264 (502)
                       |. +.|+.+|+   + +..+..+++.  .+|+++++.    .  +     -|++++..|+||...|+++|+..+  ++.
T Consensus        95 r~~~eia~~~g~---~~v~~l~~~~g~--~~~~~~ve~----~--~-----~v~~vhnETSTGv~npv~~i~~~~--~~~  156 (374)
T TIGR01365        95 GWVTDVTKQLKL---PDVRVLEAEYGK--LPDLKKVDF----K--N-----DVVFTWNGTTSGVRVPNGDFIPAD--REG  156 (374)
T ss_pred             HHHHHHHHhcCC---CCcEEEcCCCCC--CCCHHHcCC----C--C-----CEEEecCCCchheecccccccccc--CCC
Confidence             45 78888999   5 7777777644  789999973    1  1     267999999999999998766432  589


Q ss_pred             EEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCc-----ccccCccCCCC
Q 037144          265 WVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNP-----QYLKNEATDQE  339 (502)
Q Consensus       265 ~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~-----~yl~~~~~~~~  339 (502)
                      .++||+.-+.+..+++-        +++|.+..+.+|+++.|.|.+++.++++.+.+ .-....     .|+.....   
T Consensus       157 lliVDavSs~g~~~l~~--------d~iDv~~tgsQK~L~~ppGls~v~vs~~Al~~-~~~~~~y~~~~~~~~~~~~---  224 (374)
T TIGR01365       157 LTICDATSAAFAQDLDY--------HKLDVVTFSWQKVLGGEGAHGMLILSPRAVAR-LESYTPAWPLPKIFRLTKG---  224 (374)
T ss_pred             cEEEEccchhcCCCCCh--------hHCcEEEEechhccCCCCceEEEEECHHHHHH-HhhcCCCCCChhhhccccc---
Confidence            99999987666655532        15999999999999999999999998876532 111111     12211000   


Q ss_pred             CcccccCCCcccccCCCCCC--chHHHHH---HHHhcHH-HHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-C--Cee-E
Q 037144          340 PKEQEVGYKDWQITLCRRFR--SLKLWVV---IRNFGVA-NLRNFIRSHVGMAKLFERLVTSDKRFEVAFP-R--NFS-L  409 (502)
Q Consensus       340 ~~~~~~~~~~~~~~~sr~~~--al~~~~~---l~~~g~~-g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~-~--~~~-~  409 (502)
                         +.+  .........++.  ...+++.   ++.+..+ |++++.+++.++++.+++.+++++.++++.. +  .++ +
T Consensus       225 ---~~~--~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tv  299 (374)
T TIGR01365       225 ---GKL--NKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTS  299 (374)
T ss_pred             ---cch--hhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCe
Confidence               000  000000111211  1233333   3333454 8999999999999999999999844787753 1  344 4


Q ss_pred             EEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeE-CCEEEEEEEecCCCCcHHHH
Q 037144          410 VCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIV-GGIYVLRFAAGNSMTMESHV  488 (502)
Q Consensus       410 v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~-~g~~~lR~~~~~~~t~~~di  488 (502)
                      +++.+++.+.++                 .+.+....+..++++.+.++|..+ .++.. .....+||..+.. .+.+||
T Consensus       300 t~v~~~~~~~~~-----------------~~~~~~~~~~~~~~~~l~~~gi~i-~~G~~~~~~~~fRIg~~G~-i~~~di  360 (374)
T TIGR01365       300 VCLKVVDPAIDA-----------------LDEDAQADFAKELISTLEKEGVAY-DIGSYRDAPSGLRIWCGAT-VEKSDL  360 (374)
T ss_pred             EEEEeCCccccc-----------------cccchhhHHHHHHHHHHHHCCEEE-eccccccCCCceEEecCCc-CCHHHH
Confidence            456653321100                 000011223456788888888643 33322 1236899998865 556699


Q ss_pred             HHHHHHHHHH
Q 037144          489 RAAWTVVQEH  498 (502)
Q Consensus       489 ~~~~~~l~~~  498 (502)
                      +.+++.|.=+
T Consensus       361 ~~l~~~l~~~  370 (374)
T TIGR01365       361 ECLCPWLDWA  370 (374)
T ss_pred             HHHHHHHHHH
Confidence            9999998644

This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.

>PRK04781 histidinol-phosphate aminotransferase; Provisional

Probab=99.76  E-value=6.7e-16  Score=156.48  Aligned_cols=291  Identities=9%  Similarity=0.018  Sum_probs=187.0

Q ss_pred             HHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCC-eEEEeCCCCchhHHHHHHHcCCC
Q 037144          120 IVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISK-LVVYSSDQTHCAFQKAAQIVGID  198 (502)
Q Consensus       120 ~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~-~~v~~s~~~H~s~~~aa~~~Glg  198 (502)
                      ++++.+++++|++.+       ..++|+|+++++..++.+...           ++ ++|+++.+.+..+...++..|+ 
T Consensus        63 ~lr~~ia~~~~~~~~-------~I~~t~G~~~~l~~~~~~~~~-----------~g~~~vlv~~p~y~~~~~~~~~~g~-  123 (364)
T PRK04781         63 GLRSALAALYGCAPE-------QLLIGRGSDEAIDLLVRALCV-----------PGRDAVLVTPPVFGMYAVCARLQNA-  123 (364)
T ss_pred             HHHHHHHHHhCcChH-------HEEEeCCHHHHHHHHHHHhcC-----------CCCCeEEEcCCChHHHHHHHHHcCC-
Confidence            445556667787654       688999999888666554432           34 6788888777777778899999 


Q ss_pred             CCCEEEEecCC-CCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHH--hCCEEEeecccccc
Q 037144          199 RKNIRAIKTTK-SSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQ--FGIWVHVDAAYAGS  275 (502)
Q Consensus       199 ~~~v~~v~~~~-~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~--~g~~lhVDaA~g~~  275 (502)
                        +++.+|++. ++++.+|++++++.+...     .+.+|+++.++|+||.+-|.+++.++++.  +++|+++|.+|+.+
T Consensus       124 --~~~~v~~~~~~~~~~~d~~~l~~~~~~~-----~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~~f  196 (364)
T PRK04781        124 --PLVEVPLVDGADGFHADVPAIVAAALAS-----NAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGEF  196 (364)
T ss_pred             --EEEEEecCCCccCCCcCHHHHHHHHhcc-----CCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcchhh
Confidence              999999853 234678999886654321     13477778899999999999888888875  47999999999765


Q ss_pred             cccCccchhhhcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccC
Q 037144          276 ACICPEFRHFIDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITL  354 (502)
Q Consensus       276 ~~~~~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~  354 (502)
                      .. .+..........+ =.+.-++.|.++ .....|+++. +++... .+.......                   +   
T Consensus       197 ~~-~~~~~~~~~~~~~-vi~~~SfSK~~gl~GlRvGy~v~-~~~l~~-~l~~~~~~~-------------------~---  250 (364)
T PRK04781        197 SD-VPSAVGLLARYDN-LAVLRTLSKAHALAAARIGSLIA-NAELIA-VLRRCQAPY-------------------P---  250 (364)
T ss_pred             cC-CcchHHHHhhCCC-EEEEecChhhcccccceeeeeeC-CHHHHH-HHHhccCCC-------------------C---
Confidence            42 1111111111111 145567999997 5566787765 444332 222111100                   0   


Q ss_pred             CCCCCchHHHHHHHHh--c-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCC
Q 037144          355 CRRFRSLKLWVVIRNF--G-VANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGT  431 (502)
Q Consensus       355 sr~~~al~~~~~l~~~--g-~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~  431 (502)
                         ...+...++...+  + .+...+.+++..+.++++.+.|++++++..+.++..+.+.+++. .              
T Consensus       251 ---~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~-~--------------  312 (364)
T PRK04781        251 ---VPTPCAALAEQALSAPALAVTARRVAEVRAERERLHAALAQLPGVRRVYPSQGNFLLVRFD-D--------------  312 (364)
T ss_pred             ---CCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcC-C--------------
Confidence               0122223333333  2 24456666777888899999999988875444666656555542 1              


Q ss_pred             cccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC-CEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144          432 YDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG-GIYVLRFAAGNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       432 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~  500 (502)
                                      ..++.+.+.++|..+..+..+. ...++|++++    +.++.++++++|+++..
T Consensus       313 ----------------~~~~~~~l~~~gI~v~~~~~~~~~~~~~Ris~~----~~~~~~~l~~al~~~~~  362 (364)
T PRK04781        313 ----------------AEAAFQALLAAGVVVRDQRAAPRLSDALRITLG----TPEQNDRVLAALQRTQA  362 (364)
T ss_pred             ----------------HHHHHHHHHHCCeEEeeCCCCCCCCCeEEEeCC----CHHHHHHHHHHHHHHHh
Confidence                            2356677777887665554332 2468999986    45689999999988643

>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]

Probab=99.76  E-value=1.2e-16  Score=146.97  Aligned_cols=297  Identities=11%  Similarity=0.068  Sum_probs=203.7

Q ss_pred             hHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHH
Q 037144          114 AVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQ  193 (502)
Q Consensus       114 ~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~  193 (502)
                      ...+.+.+...++++.|-++         .++.+++-.||.-++.+...           +++.|+..+..|.|+....+
T Consensus       110 tq~iHk~LE~kiAqfh~rED---------~ilypscfdANag~feail~-----------pedAvfSDeLNhASIIdGir  169 (417)
T KOG1359|consen  110 TQDIHKLLESKIAQFHGRED---------TILYPSCFDANAGAFEAILT-----------PEDAVFSDELNHASIIDGIR  169 (417)
T ss_pred             chHHHHHHHHHHHHHhCCCc---------eEEeccccccchHHHHHhcC-----------hhhhhhccccccchhhhhhH
Confidence            46677788888999988664         57788888888555444432           67788888899999998877


Q ss_pred             HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccc
Q 037144          194 IVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYA  273 (502)
Q Consensus       194 ~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g  273 (502)
                      ++.-              .+.+|+-+||..+.+..+..  -.+|+.....++.|.+.|+++|..+++|||+.+.+|.+|+
T Consensus       170 Lckr--------------y~h~dv~~l~~~l~~a~k~r--~klv~TDg~FSMDGdiaPl~ei~~La~kYgaLlfiDecHa  233 (417)
T KOG1359|consen  170 LCKR--------------YRHVDVFDLEHCLISACKMR--LKLVVTDGVFSMDGDIAPLEEISQLAKKYGALLFIDECHA  233 (417)
T ss_pred             HHhh--------------hccchhHHHHHHHHHhhhhe--EEEEEecceeccCCCcccHHHHHHHHHhcCcEEEEeeccc
Confidence            6652              23678888998877554322  2356666678899999999999999999999999999998


Q ss_pred             cccccCc--cchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhh-cCCcccccCccCCCCCcccccCCCcc
Q 037144          274 GSACICP--EFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTL-STNPQYLKNEATDQEPKEQEVGYKDW  350 (502)
Q Consensus       274 ~~~~~~~--~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~-~~~~~yl~~~~~~~~~~~~~~~~~~~  350 (502)
                      .+++--.  .....+.-+.++|.+.....|.+++.  .|.+...++.+ .+.+ +...+|++.....             
T Consensus       234 Tgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga--~GGyttgp~~l-i~llrqr~RpylFSnslp-------------  297 (417)
T KOG1359|consen  234 TGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGA--SGGYTTGPKPL-ISLLRQRSRPYLFSNSLP-------------  297 (417)
T ss_pred             ceeecCCCCChHHHhCCCCcceehhhhhhhhhcCC--CCCCccCChhH-HHHHHhcCCceeecCCCC-------------
Confidence            8765321  11222333458999999999998743  33343333333 3333 4566788764321             


Q ss_pred             cccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCC
Q 037144          351 QITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNG  430 (502)
Q Consensus       351 ~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~  430 (502)
                         -+--..+.+++..+.     .-.+.+.+...+.++|++.++.. ||++.+.. .+++...+..              
T Consensus       298 ---pavV~~a~ka~dllm-----~s~~~i~~~~a~~qrfr~~me~a-GftIsg~~-hPI~pv~lGd--------------  353 (417)
T KOG1359|consen  298 ---PAVVGMAAKAYDLLM-----VSSKEIQSRQANTQRFREFMEAA-GFTISGAS-HPICPVMLGD--------------  353 (417)
T ss_pred             ---hhhhhhhHHHHHHHH-----hhHHHHHHHHHHHHHHHHHHHhc-CceecCCC-CCccceeccc--------------
Confidence               000012233333332     22567778888999999999876 99997643 3444443322              


Q ss_pred             CcccccccchhHhhHHHHHHHHHHHHhcCcEEEE---eeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          431 TYDQYRQFSEEERTNEFNRELLESINVSGKVFMT---HAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       431 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~---~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                                    .++..++.++|.++|+.++.   |.+..|+.-+|+.+...||++ |||++++++.++.+.
T Consensus       354 --------------a~lA~~~ad~lLk~Gi~Vigfs~PvVP~gkariRVqiSAaHt~e-did~~i~Af~~vgr~  412 (417)
T KOG1359|consen  354 --------------ARLASKMADELLKRGIYVIGFSYPVVPKGKARIRVQISAAHTEE-DIDRLIEAFSEVGRF  412 (417)
T ss_pred             --------------HHHHHHHHHHHHhcCceEEeecCCcCCCCceEEEEEEehhcCHH-HHHHHHHHHHHHHHh
Confidence                          34466778888899986543   444578889999997776665 999999999998764

>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase

Probab=99.76  E-value=3e-16  Score=159.63  Aligned_cols=219  Identities=12%  Similarity=0.204  Sum_probs=152.9

Q ss_pred             ChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh---
Q 037144          111 SPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA---  187 (502)
Q Consensus       111 ~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s---  187 (502)
                      .|...++|    +.+++++|.+         ..++++||++|+..++.+...           +++.|+++...|.+   
T Consensus        53 ~p~~~~le----~~la~l~g~~---------~~~~~~sG~~Ai~~al~al~~-----------~Gd~Vl~~~~~~~~t~~  108 (380)
T TIGR01325        53 NPTVAAFE----ERIAALEGAE---------RAVATATGMSAIQAALMTLLQ-----------AGDHVVASRSLFGSTVG  108 (380)
T ss_pred             CchHHHHH----HHHHHHhCCC---------cEEEECCHHHHHHHHHHHHhC-----------CCCEEEEecCCcchHHH
Confidence            44455555    4577888874         358899999999877765432           56677777777643   


Q ss_pred             -HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEE
Q 037144          188 -FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWV  266 (502)
Q Consensus       188 -~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~l  266 (502)
                       +.+.+..+|+   +++.++.+       |++++++++++++      .+|++..++|++|.+.|+++|.++|+++|+++
T Consensus       109 ~~~~~~~~~g~---~v~~v~~~-------d~~~l~~~i~~~t------klV~le~p~np~g~~~dl~~I~~la~~~gi~l  172 (380)
T TIGR01325       109 FISEILPRFGI---EVSFVDPT-------DLNAWEAAVKPNT------KLVFVETPSNPLGELVDIAALAELAHAIGALL  172 (380)
T ss_pred             HHHHHHHHhCC---EEEEECCC-------CHHHHHHhcCCCc------eEEEEECCCCCCCeeeCHHHHHHHHHHcCCEE
Confidence             3446677888   88888753       7888988886533      48888999999999999999999999999999


Q ss_pred             EeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-cceEEEeeCchhhhhhhcCCcccccCccCCCCCccccc
Q 037144          267 HVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-DCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEV  345 (502)
Q Consensus       267 hVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~  345 (502)
                      +||++|+.+....+ ..      .++|.++.++||+++++. ..|.+++.++..... +.   .+...            
T Consensus       173 ivD~a~~~~~~~~p-l~------~g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~~~-l~---~~~~~------------  229 (380)
T TIGR01325       173 VVDNVFATPVLQQP-LK------LGADVVVYSATKHIDGQGRVMGGVIAGSEELMAE-VA---VYLRH------------  229 (380)
T ss_pred             EEECCCcccccCCc-hh------hCCCEEEeeccceecCCCCeEEEEEEeCHHHHHH-HH---HHHHh------------
Confidence            99999976543222 11      168999999999998764 333444444433221 11   11110            


Q ss_pred             CCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144          346 GYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA  402 (502)
Q Consensus       346 ~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~  402 (502)
                              .+....+..+|.+++  |.+.+..++++..+++.++.+.|+++|+++-+
T Consensus       230 --------~g~~~~p~~a~~~l~--~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V  276 (380)
T TIGR01325       230 --------TGPAMSPFNAWVLLK--GLETLSLRMQKQFDSALAIAEWLQAQPQVQAV  276 (380)
T ss_pred             --------hCCCCCHHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHHcCCCccEE
Confidence                    011123344566554  55777888999999999999999999987643

This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.

>PRK01533 histidinol-phosphate aminotransferase; Validated

Probab=99.76  E-value=3.6e-16  Score=158.35  Aligned_cols=279  Identities=11%  Similarity=0.093  Sum_probs=184.6

Q ss_pred             HHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCC
Q 037144          121 VMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRK  200 (502)
Q Consensus       121 ~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~  200 (502)
                      +++.+++.+|++.+       ..++|+|+++++..++.+..+           +++.|+++.+++..+...++..|+   
T Consensus        69 Lr~aia~~~~~~~~-------~I~vt~Gs~e~i~~~~~~l~~-----------~gd~vlv~~P~y~~~~~~~~~~g~---  127 (366)
T PRK01533         69 LRQTIANKLHVKME-------QVLCGSGLDEVIQIISRAVLK-----------AGDNIVTAGATFPQYRHHAIIEGC---  127 (366)
T ss_pred             HHHHHHHHhCCCcc-------eEEECCCHHHHHHHHHHHhcC-----------CCCEEEEcCCcHHHHHHHHHHcCC---
Confidence            44445566688664       689999999988766665433           677888999999999999999999   


Q ss_pred             CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHH---HhCCEEEeecccccccc
Q 037144          201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAK---QFGIWVHVDAAYAGSAC  277 (502)
Q Consensus       201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~---~~g~~lhVDaA~g~~~~  277 (502)
                      +++.||++   ++.+|+++|++++++.+      .+|+++.++|+||.+-+.+++.++++   +++ ++++|.+|..+..
T Consensus       128 ~v~~v~~~---~~~~d~~~l~~~~~~~~------~~v~i~~P~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~  197 (366)
T PRK01533        128 EVKEVALN---NGVYDLDEISSVVDNDT------KIVWICNPNNPTGTYVNDRKLTQFIEGISENT-LIVIDEAYYEYVT  197 (366)
T ss_pred             EEEEeecC---CCCcCHHHHHHHhCcCC------cEEEEeCCCCCCCCCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhc
Confidence            99999986   34799999999886543      36778899999999988766666554   455 6788999964432


Q ss_pred             cCccchhhhcCCCCC--CeeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccC
Q 037144          278 ICPEFRHFIDGVECV--DSFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITL  354 (502)
Q Consensus       278 ~~~~~~~~~~~~~~a--Dsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~  354 (502)
                      . ......+..+...  -.+..++.|.++ ....+|+++. ++............|                        
T Consensus       198 ~-~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~-~~~~~~~l~~~~~~~------------------------  251 (366)
T PRK01533        198 A-KDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVG-HEELIEKLNVVRLPF------------------------  251 (366)
T ss_pred             c-ccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhC-CHHHHHHHHHhcCCC------------------------
Confidence            1 1111111111121  245667999997 4455677654 343322211111000                        


Q ss_pred             CCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcc
Q 037144          355 CRRFRSLKLWVVIRNFG-VANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYD  433 (502)
Q Consensus       355 sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~  433 (502)
                        ....+...++...+. .+...+..+...+.++++.+.++++ ++++. ++..+.+.+++. .                
T Consensus       252 --~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~r~~~~~~l~~~-g~~~~-~~~~nf~~~~~~-~----------------  310 (366)
T PRK01533        252 --NVSSLAQKAATIAFGDDEFIEEIVRVNTEGLRQYESFCKEN-EIPFY-QSQTNFIFLPVE-N----------------  310 (366)
T ss_pred             --CcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCccC-CCcCcEEEEeCC-C----------------
Confidence              013344455555543 3455666677777888888888877 77765 567777776652 2                


Q ss_pred             cccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144          434 QYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       434 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~  500 (502)
                                    ..++.+.|.++|..+..   +  ..++|++++    +.++.++++++|+++.+
T Consensus       311 --------------~~~~~~~l~~~GI~Vr~---~--~~~iRis~~----~~~~~~~l~~al~~~~~  354 (366)
T PRK01533        311 --------------GGEIYEACAHAGFIIRP---F--PNGVRITVG----TREQNEGVISVLQQHFE  354 (366)
T ss_pred             --------------HHHHHHHHHHCCcEEcc---C--CCceEEeCC----CHHHHHHHHHHHHHHHH
Confidence                          23567777788976543   2  357999986    55799999999998764

>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional

Probab=99.76  E-value=5.6e-16  Score=158.33  Aligned_cols=220  Identities=9%  Similarity=0.101  Sum_probs=157.9

Q ss_pred             cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCch---
Q 037144          110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHC---  186 (502)
Q Consensus       110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~---  186 (502)
                      ..|...++|+.    ++++.|.+         ..+++++|+.|+..++.+...           +++.|+++...|.   
T Consensus        68 ~~p~~~~le~~----lA~l~g~~---------~al~~~sG~~Ai~~~l~all~-----------~Gd~Vl~~~~~~~~t~  123 (403)
T PRK07810         68 GNPTVSMFEER----LRLIEGAE---------ACFATASGMSAVFTALGALLG-----------AGDRLVAARSLFGSCF  123 (403)
T ss_pred             CCchHHHHHHH----HHHHhCCC---------cEEEECChHHHHHHHHHHHhC-----------CCCEEEEccCCcchHH
Confidence            55666666655    67888865         368899999998776655432           6778888876652   


Q ss_pred             -hHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144          187 -AFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW  265 (502)
Q Consensus       187 -s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~  265 (502)
                       .+.+.++..|+   +++.++.       .|+++++++|+++++      +|++..++|++|.+-|+++|+++|+++|++
T Consensus       124 ~~~~~~~~~~G~---~v~~vd~-------~d~~~l~~ai~~~tk------lV~~esp~Nptg~v~dl~~I~~la~~~g~~  187 (403)
T PRK07810        124 VVCNEILPRWGV---ETVFVDG-------EDLSQWEEALSVPTQ------AVFFETPSNPMQSLVDIAAVSELAHAAGAK  187 (403)
T ss_pred             HHHHHHHHHcCc---EEEEECC-------CCHHHHHHhcCcCce------EEEEECCCCCCCeecCHHHHHHHHHHcCCE
Confidence             33455677898   8888864       288999999976543      788999999999999999999999999999


Q ss_pred             EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCccc
Q 037144          266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQ  343 (502)
Q Consensus       266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~  343 (502)
                      ++||++|+.+...-+ . .     .++|.++.++||+++++..  .|+++.++ ..+...+.   .++..          
T Consensus       188 vivD~a~a~~~~~~~-~-~-----~gaDivv~S~tK~l~g~g~~~gG~v~~~~-~~~~~~l~---~~~~~----------  246 (403)
T PRK07810        188 VVLDNVFATPLLQRG-L-P-----LGADVVVYSGTKHIDGQGRVLGGAILGDR-EYIDGPVQ---KLMRH----------  246 (403)
T ss_pred             EEEECCCCccccCCh-h-h-----cCCcEEEccCCceecCCcCceeEEEEeCh-HHHHHHHH---HHHHH----------
Confidence            999999976654322 1 1     1789999999999986543  45555543 32221110   11111          


Q ss_pred             ccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144          344 EVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA  402 (502)
Q Consensus       344 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~  402 (502)
                                .+....++..|..++  |.+.+..++++..+++.++.+.|++.|.++-+
T Consensus       247 ----------~g~~~s~~~a~l~l~--~L~tl~~R~~~~~~~a~~~a~~L~~~p~v~~V  293 (403)
T PRK07810        247 ----------TGPALSAFNAWVLLK--GLETLALRVRHSNASALRIAEFLEGHPAVRWV  293 (403)
T ss_pred             ----------hCCCCCHHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHhcCCCccEE
Confidence                      011234566676665  55778999999999999999999999988644

>PLN02452 phosphoserine transaminase

Probab=99.76  E-value=2.3e-16  Score=158.20  Aligned_cols=340  Identities=11%  Similarity=0.043  Sum_probs=213.4

Q ss_pred             cccccCCCCCCH-HHHHHHHHHhhcCCCCc------ccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCch
Q 037144           78 NYFAYFPATSSV-AGIVGEMLSSGFNVVGL------DWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTC  150 (502)
Q Consensus        78 ~~~~~~~~~~~~-~~~~~~~l~~~~n~~~~------~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt  150 (502)
                      +-+.|.+++... +.++..+....+|-.+.      ...-++.+.++-+++.+.|+++++.|+++     .-.++++|||
T Consensus         7 ~~~~f~pGP~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~y-----~v~~l~Gsgt   81 (365)
T PLN02452          7 RVFNFSAGPATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDNY-----EVLFLQGGAS   81 (365)
T ss_pred             ceEeeeCCCCCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCc-----eEEEEeCccH
Confidence            445677766554 45555555555543211      12346788899999999999999997653     1346668888


Q ss_pred             HHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh--HHHHHHHcCCCCCCEEEEecCCCC-CcccCHHHHHHHHHHH
Q 037144          151 EALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA--FQKAAQIVGIDRKNIRAIKTTKSS-SYGLSAESVLSQINLD  227 (502)
Q Consensus       151 ~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s--~~~aa~~~Glg~~~v~~v~~~~~~-~~~~d~~~Le~~i~~~  227 (502)
                      .++-.++......          .+.+.++. .+.++  +.+.|+.+|.   ..+.....+.+ ....++++++.    +
T Consensus        82 ~~~ea~~~nl~~~----------~~~~l~~~-~G~fg~r~~~~a~~~g~---~~~~~~~~~~~~~~~~~~~~~~~----~  143 (365)
T PLN02452         82 TQFAAIPLNLCKP----------GDKADFVV-TGSWSKKAAKEAKKYCK---TNVIASGKDEKYTKIPSVSEWEL----T  143 (365)
T ss_pred             HHHHHHHHhcCCC----------CCeEEEEE-CCHHHHHHHHHHHHhCC---CcEEEecCCCCCCCCCChHHcCC----C
Confidence            7765544433221          23344443 46654  6667777776   44444222211 11456666421    1


Q ss_pred             HhcCCccEEEEEecCCccccc-cCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC
Q 037144          228 VEAELIPLFLCATVGTTAITA-VDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT  306 (502)
Q Consensus       228 ~~~g~~p~~Vv~t~gtt~~G~-idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p  306 (502)
                          ..+.+|..++..|.+|. +.|++++.+      +.++||++...+..+++--        ..+.+..++||+++ |
T Consensus       144 ----~~~~~v~~~hnETstGv~~~~~~~i~~------~~lvVDa~Ss~g~~pidv~--------~~~v~~~saqK~lG-P  204 (365)
T PLN02452        144 ----PDAKFVHICANETIHGVEFKDYPDVGN------VPLVADMSSNFLSKPVDVS--------KYGVIYAGAQKNVG-P  204 (365)
T ss_pred             ----CCCcEEEECCCCCCCcEecCcccccCC------CeEEEECCccccCcccCHH--------HcCEEEEecccccC-C
Confidence                12458999999999999 699988863      7999999998887776532        23334479999986 8


Q ss_pred             CcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCC-CCchHHHHHHHHhcHH-HHHHHHHHHHH
Q 037144          307 LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRR-FRSLKLWVVIRNFGVA-NLRNFIRSHVG  384 (502)
Q Consensus       307 ~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~g~~-g~~~~~~~~~~  384 (502)
                      .|.|++++|++.+- ..-...+.|+......        .  ..+.-.+-+ +....+..+++.+-.+ |++.+.+++.+
T Consensus       205 ~Gl~~v~vr~~~l~-~~~~~~~~~~~~~~~~--------~--~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~  273 (365)
T PLN02452        205 SGVTIVIIRKDLIG-NARPITPGMLDYKIHA--------E--NDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIR  273 (365)
T ss_pred             CCeEEEEEcHHHHh-hcccCCCchhhHHHHH--------h--cCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHH
Confidence            89999999876542 2212223332211000        0  000001111 1224556677777665 89999999999


Q ss_pred             HHHHHHHHHhcCCCeEEe-cCC---CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCc
Q 037144          385 MAKLFERLVTSDKRFEVA-FPR---NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGK  460 (502)
Q Consensus       385 la~~l~~~l~~~~~~~l~-~~~---~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~  460 (502)
                      +++++++.|++.+||... ..+   ...+|+|.+...                            ++..++.+.+.++|.
T Consensus       274 ~a~~l~~~l~~~~G~y~~~~~~~~rs~~~vsF~~~~~----------------------------~~~~~f~~~~~~~g~  325 (365)
T PLN02452        274 KADLLYDAIDESNGFYVCPVEKSVRSLMNVPFTLGGS----------------------------ELEAEFVKEAAKAGM  325 (365)
T ss_pred             HHHHHHHHHHhCCCcccCCCChHHhCCeEEEEEcCCc----------------------------hhHHHHHHHHHHCCC
Confidence            999999999998887221 111   234788887542                            135688888889998


Q ss_pred             EEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          461 VFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       461 ~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      +.+.+...-|  -+|+|+-|. .+.++|++|++.+++..++
T Consensus       326 ~~~~G~r~~g--g~R~s~yna-~~~~~v~~L~~~m~~f~~~  363 (365)
T PLN02452        326 VQLKGHRSVG--GMRASIYNA-MPLAGVEKLVAFMKDFQAK  363 (365)
T ss_pred             cccCCccccC--ceEEECcCC-CCHHHHHHHHHHHHHHHHh
Confidence            7655543323  299998665 5567999999999987654

>PRK08153 histidinol-phosphate aminotransferase; Provisional

Probab=99.76  E-value=8.3e-16  Score=156.13  Aligned_cols=289  Identities=10%  Similarity=0.034  Sum_probs=186.8

Q ss_pred             HHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCC
Q 037144          121 VMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRK  200 (502)
Q Consensus       121 ~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~  200 (502)
                      +++.+++.+|++.+       ..++|+|+++++..++.+..+           +++.|++..++|+.+...++..|.   
T Consensus        72 Lr~~ia~~~~~~~~-------~I~it~G~~~~l~~~~~~~~~-----------~gd~vlv~~p~y~~~~~~~~~~g~---  130 (369)
T PRK08153         72 LRHALAAHHGVAPE-------NIMVGEGIDGLLGLIVRLYVE-----------PGDPVVTSLGAYPTFNYHVAGFGG---  130 (369)
T ss_pred             HHHHHHHHhCCCHH-------HEEEcCCHHHHHHHHHHHhcC-----------CCCEEEECCCcchHHHHHHHHcCC---
Confidence            34445555677654       588899988877655554332           678889999999999888889999   


Q ss_pred             CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh--CCEEEeeccccccccc
Q 037144          201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF--GIWVHVDAAYAGSACI  278 (502)
Q Consensus       201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~--g~~lhVDaA~g~~~~~  278 (502)
                      +++.+|.+.+   .+|++++++.+....     +.+|+++.++|+||.+-+.+++.++++.+  ++|+++|.+|+.....
T Consensus       131 ~~~~vp~~~~---~~~~~~l~~~~~~~~-----~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~lI~DE~y~~~~~~  202 (369)
T PRK08153        131 RLVTVPYRDD---REDLDALLDAARREN-----APLVYLANPDNPMGSWHPAADIVAFIEALPETTLLVLDEAYCETAPA  202 (369)
T ss_pred             eEEEeeCCCC---CCCHHHHHHHhcccC-----CcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhhcCc
Confidence            9999998642   589988877664321     23677788999999999988888887654  8999999999754321


Q ss_pred             CccchhhhcCCCCCCeeEEccCCcCCC-CCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCC
Q 037144          279 CPEFRHFIDGVECVDSFSFNPHKWLFT-TLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRR  357 (502)
Q Consensus       279 ~~~~~~~~~~~~~aDsi~~~~hK~l~~-p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~  357 (502)
                       ..... +.....--.+..++.|.++. ...+|+++.. +.... .+.....+.                   +      
T Consensus       203 -~~~~~-~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~~-~~~~~-~l~~~~~~~-------------------~------  253 (369)
T PRK08153        203 -GAAPP-IDTDDPNVIRMRTFSKAYGLAGARVGYAIGA-PGTIK-AFDKVRNHF-------------------G------  253 (369)
T ss_pred             -ccchh-hhhcCCCEEEEecchHhccCcchheeeeecC-HHHHH-HHHHhhcCC-------------------C------
Confidence             11111 11111112456679999974 4556777763 33322 221111100                   0      


Q ss_pred             CCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCccccc
Q 037144          358 FRSLKLWVVIRNFG-VANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYR  436 (502)
Q Consensus       358 ~~al~~~~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~  436 (502)
                      ...+..+++...+. .+.+++..+...++++++.+.|++. ++... ++..+++.+.....                   
T Consensus       254 ~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~-g~~~~-p~~~~f~~~~~~~~-------------------  312 (369)
T PRK08153        254 MNRIAQAAALAALKDQAYLAEVVGKIAAARDRIAAIARAN-GLTPL-PSATNFVAIDCGRD-------------------  312 (369)
T ss_pred             CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCccC-CCcCcEEEEECCCC-------------------
Confidence            12333444444442 3456677778888888999999876 67644 44555554443211                   


Q ss_pred             ccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144          437 QFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       437 ~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~  500 (502)
                              ......+.+++.++|..+..+....+..++|+++.    +++++++++++|+++.+
T Consensus       313 --------~~~a~~l~~~l~~~Gi~v~~p~~~~~~~~iRis~~----~~~~~~~~~~al~~~~~  364 (369)
T PRK08153        313 --------GAFARAVLDGLIARDIFVRMPGVAPLDRCIRVSCG----PDEELDLFAEALPEALE  364 (369)
T ss_pred             --------cccHHHHHHHHHHCCeEEeeCCCCCCCCeEEEecC----CHHHHHHHHHHHHHHHH
Confidence                    12345778888888875533433234569999986    46799999999998765

>PRK07269 cystathionine gamma-synthase; Reviewed

Probab=99.75  E-value=1.4e-16  Score=160.62  Aligned_cols=234  Identities=12%  Similarity=0.125  Sum_probs=161.5

Q ss_pred             ccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhH
Q 037144          109 ISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAF  188 (502)
Q Consensus       109 ~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~  188 (502)
                      ..+|...++|+.    ++++.|.+         .+++++||++|+..++. +..           +++.|+++...+...
T Consensus        51 ~~~p~~~~le~~----lA~leg~~---------~~v~~~sG~aAi~~~l~-~l~-----------~GD~VI~~~~~yg~~  105 (364)
T PRK07269         51 TKNPTRAKLEET----LAAIESAD---------YALATSSGMSAIVLAFS-VFP-----------VGSKVVAVRDLYGGS  105 (364)
T ss_pred             CCCccHHHHHHH----HHHHhCCC---------eEEEeCCHHHHHHHHHH-HhC-----------CCCEEEEecCCcCch
Confidence            356777777776    55665643         47889999999877663 322           567777776655432


Q ss_pred             HHHHHHc-CCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEE
Q 037144          189 QKAAQIV-GIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVH  267 (502)
Q Consensus       189 ~~aa~~~-Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lh  267 (502)
                      ....... .-+  .   +.+    .+.+|+++++++|+++++      +|+++.++|++|.+.|+++|+++|+++|++++
T Consensus       106 ~~~~~~~~~~~--~---~~~----~~~~d~~~l~~~i~~~Tk------lV~lesP~NPtg~~~di~~I~~la~~~gi~vv  170 (364)
T PRK07269        106 FRWFNQQEKEG--R---FHF----TYANTEEELIAAIEEDTD------IVYIETPTNPLMVEFDIEKVAKLAHAKGAKVI  170 (364)
T ss_pred             HHHHHHHHhcC--c---EEE----EecCCHHHHHHhcCcCce------EEEEECCCCCCCeeeCHHHHHHHHHHcCCEEE
Confidence            2222211 110  1   111    134689999999976554      89999999999999999999999999999999


Q ss_pred             eecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCccccc
Q 037144          268 VDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEV  345 (502)
Q Consensus       268 VDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~  345 (502)
                      ||.+|+......| ..      .++|.++.++||+++++..  .|+++++++........ ...+               
T Consensus       171 vD~t~~~~~~~~p-l~------~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~-~~~~---------------  227 (364)
T PRK07269        171 VDNTFYSPIYQRP-IE------LGADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFY-NLNT---------------  227 (364)
T ss_pred             EECCCcccccCCc-hh------hCCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHH-HHHH---------------
Confidence            9999866543322 11      2899999999999988765  56666666544322210 0000               


Q ss_pred             CCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE-ecCCCeeEEEEEee
Q 037144          346 GYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEV-AFPRNFSLVCFRVT  415 (502)
Q Consensus       346 ~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l-~~~~~~~~v~f~~~  415 (502)
                              .+....++..|..++.  .+.+..++++..+++.++.+.|++.|++.- ..|+..++++|.+.
T Consensus       228 --------~G~~~s~~~a~l~~~~--L~tL~~r~~~~~~na~~~a~~L~~~p~v~~v~ypg~gg~~sf~~~  288 (364)
T PRK07269        228 --------TGAVLSPFDSYLLMRG--LKTLSLRMERSTANAQEVVAFLKKSPAVKEVLYTGKGGMISFKVA  288 (364)
T ss_pred             --------hCCCCCHHHHHHHHcC--CCcHHHHHHHHHHHHHHHHHHHHhCCCccEEeCCCcCcEEEEEEC
Confidence                    0112355667766664  466899999999999999999999998754 44777889999885

>PRK07590 L,L-diaminopimelate aminotransferase; Validated

Probab=99.75  E-value=1.5e-15  Score=156.55  Aligned_cols=356  Identities=13%  Similarity=0.024  Sum_probs=209.0

Q ss_pred             CHHHHHHHHHHhhcCCCCCCCCCcc--cccCCCCCCHHHHHHHHHHhhcCC-----CCcccccChhhHHHHHHHHHHHHH
Q 037144           55 SVETILQDVQEHIVPGITHWQSPNY--FAYFPATSSVAGIVGEMLSSGFNV-----VGLDWISSPAAVELENIVMDWLGQ  127 (502)
Q Consensus        55 ~~~~il~~~~~~~~~~~~~~~~p~~--~~~~~~~~~~~~~~~~~l~~~~n~-----~~~~~~~~p~~~~le~~~~~~l~~  127 (502)
                      .+.++.+.+.+.-..    |..+..  ++....+..++..+.+.+...+..     ....|...++..++.+.+.+|+.+
T Consensus        16 ~~~~~~~~~~~~~~~----~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~   91 (409)
T PRK07590         16 LFPEIARRVNAFREA----NPEAKIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQ   91 (409)
T ss_pred             hHHHHHHHHHHHhhh----cCCCceEEecCcCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHH
Confidence            456666666654322    222322  222222223344555655554432     334566667788899999999888


Q ss_pred             hcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCC------
Q 037144          128 MLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKN------  201 (502)
Q Consensus       128 l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~------  201 (502)
                      ..|++-..     ...++|+|+++++.. +.....           +++.|++..+++..+...++..|.   .      
T Consensus        92 ~~g~~~~~-----~~I~it~Ga~~al~~-l~~~~~-----------~gd~V~v~~P~Y~~~~~~~~~~g~---~~~~~~~  151 (409)
T PRK07590         92 ARGCDISA-----DEIFISDGAKCDTGN-ILDIFG-----------PDNTIAVTDPVYPVYVDTNVMAGR---TGEANED  151 (409)
T ss_pred             hcCCcCCh-----hhEEECCCHHHHHHH-HHHhcC-----------CCCEEEEeCCCCcchHHHHHHcCC---ccccccc
Confidence            77764221     268889998887654 322221           677888899999999999999998   6      


Q ss_pred             -----EEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hhHHHHHHHHhCCEEEeecccc
Q 037144          202 -----IRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYA  273 (502)
Q Consensus       202 -----v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~eI~~i~~~~g~~lhVDaA~g  273 (502)
                           ++.+|++.++++..|.+.            ..+.+|+++.++|+||.+-+   +++|+++|++||+|+++|.+|+
T Consensus       152 ~~~~~~~~v~~~~~~~~~~d~~~------------~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~  219 (409)
T PRK07590        152 GRYSGIVYLPCTAENNFVPELPE------------EKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYE  219 (409)
T ss_pred             ccccceeEeecccccCCcccCcc------------cCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccch
Confidence                 888998754334444321            12446777899999999954   6678888999999999999997


Q ss_pred             cccccCccchhhhcCCCCC-C--eeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCC------cccccCccCCCCCccc
Q 037144          274 GSACICPEFRHFIDGVECV-D--SFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTN------PQYLKNEATDQEPKEQ  343 (502)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~a-D--si~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~------~~yl~~~~~~~~~~~~  343 (502)
                      .+........ .+..+... +  .+..++.|.++ ....+|+++.. +..+. .+...      ..+.....        
T Consensus       220 ~~~~~~~~~~-~~~~~~~~~~~vi~~~SfSK~~~~pGlRiG~~i~~-~~li~-~~~~~~~~~~~~~~~~~~~--------  288 (409)
T PRK07590        220 AFISDPSLPH-SIYEIEGARECAIEFRSFSKTAGFTGTRCAYTVVP-KELKG-KTSDGEGVSLNSLWNRRQS--------  288 (409)
T ss_pred             hhccCCCCCc-chhhCCCcccceEEEecCccccCCcCceeEEEEcC-HHHhh-hccccchhhhHHHHHHHHh--------
Confidence            6543211111 11122221 2  33567999996 55677887763 33221 11000      00000000        


Q ss_pred             ccCCCcccccCCCCCCchHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcch
Q 037144          344 EVGYKDWQITLCRRFRSLKLWVVIRNF---GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVM  420 (502)
Q Consensus       344 ~~~~~~~~~~~sr~~~al~~~~~l~~~---g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~  420 (502)
                            ...   .....+...++...+   +.+.+++..+.+.+.++++.+.|++. ++++..+.....+++++++. . 
T Consensus       289 ------~~~---~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~~~g~~f~wi~~~~~-~-  356 (409)
T PRK07590        289 ------TKF---NGVSYIVQRAAEAVYSPEGKAQIKELIDYYMENAKIIREGLESA-GFEVYGGVNAPYIWVKTPDG-M-  356 (409)
T ss_pred             ------hcc---cCcCHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecCCcceEEEEECCCC-C-
Confidence                  000   001223333333322   34566777888888899999999987 67765333344555555331 1 


Q ss_pred             hhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcEEEEeeeEC--CEEEEEEEecCCCCcHHHHHHHHHHHHH
Q 037144          421 DKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKVFMTHAIVG--GIYVLRFAAGNSMTMESHVRAAWTVVQE  497 (502)
Q Consensus       421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~--g~~~lR~~~~~~~t~~~di~~~~~~l~~  497 (502)
                                              +  ..++.+.+.++ |.++.++..+.  +..++|+++.   .++++++.+++.|.+
T Consensus       357 ------------------------~--~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~---~~~~~l~~~l~rl~~  407 (409)
T PRK07590        357 ------------------------S--SWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLSAF---GSRENVLEAMERIKK  407 (409)
T ss_pred             ------------------------C--HHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEEcc---CCHHHHHHHHHHHHh
Confidence                                    0  13455565544 65444443332  3469999963   357799999988876


Q ss_pred             H
Q 037144          498 H  498 (502)
Q Consensus       498 ~  498 (502)
                      +
T Consensus       408 ~  408 (409)
T PRK07590        408 A  408 (409)
T ss_pred             h
Confidence            4

>TIGR00461 gcvP glycine dehydrogenase (decarboxylating)

Probab=99.75  E-value=2e-15  Score=164.17  Aligned_cols=364  Identities=14%  Similarity=0.116  Sum_probs=219.3

Q ss_pred             chhHhhcCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCcccccCCCCCCHHHHHHHH-------HHhhcCCCCccccc
Q 037144           38 PGYLKKRLPESAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEM-------LSSGFNVVGLDWIS  110 (502)
Q Consensus        38 ~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-------l~~~~n~~~~~~~~  110 (502)
                      |..++..-+..+|+ +.+..++++++.++...|..   ...|.|--.-+.-+|+++.+.       ++++ .+++..  .
T Consensus        31 P~~i~~~~~l~lp~-~~sE~e~~~~~~~la~~N~~---~~~fig~G~y~~~~p~~i~r~v~~~p~~~Tay-tPyQ~E--i  103 (939)
T TIGR00461        31 PPNILKRRPLQLEA-PSKEYEALAHLKKIASKNHK---FKSYIGMGYYGTILPPVIQRNLLENPGWYTAY-TPYQPE--I  103 (939)
T ss_pred             CHHHhcCCCCCCCC-CCCHHHHHHHHHHHHhcCCC---ccccCCCCcCCCcCChHHHHHHHhCchhhhcC-CCCChh--h
Confidence            55565444456776 57999999999987655533   223444222223344445422       2222 233322  2


Q ss_pred             ChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHH
Q 037144          111 SPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQK  190 (502)
Q Consensus       111 ~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~  190 (502)
                      +-+.-+.--+...+++++.|++..       +..+..++|.+.- |+..+.... +  +    ++.+|++++..|+....
T Consensus       104 sQG~Le~l~e~Qt~i~eLtGm~~a-------NaSl~d~atA~aE-a~~~a~~~~-~--~----~~~~vlv~~~~hP~~~~  168 (939)
T TIGR00461       104 SQGRLEALLNFQTVVSDLTGLPVA-------NASLLDEGTAAAE-AMALSFNVS-K--K----KANKFFVAKDLHPQTKS  168 (939)
T ss_pred             hhHHHHHHHHHHHHHHHHHCCChh-------hhhccchhhHHHH-HHHHHHHhh-c--C----CCCEEEECCCCCcchHH
Confidence            333333344456899999999864       3456666664432 333333211 0  0    24678999999987543


Q ss_pred             ----HHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEE
Q 037144          191 ----AAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWV  266 (502)
Q Consensus       191 ----aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~l  266 (502)
                          -++..|+   +++.++.          ++|++.+  ++      +.|+++.+ +..|.+.|+++|++++|+.|.++
T Consensus       169 v~~t~a~~~g~---~v~~~~~----------~~l~~~~--~~------~~v~~q~P-n~~G~ied~~~i~~~~h~~gal~  226 (939)
T TIGR00461       169 VLHTRAKPFGI---EVIVVDC----------SDIKKAV--DV------FGCLLQYP-ATDGSILDYKQLIDALHSHKSLV  226 (939)
T ss_pred             HHHHHHHhcCc---EEEEEcH----------HHHhhcC--CE------EEEEEECC-CCCeEEecHHHHHHHHHHcCCEE
Confidence                3467788   8888743          3455554  22      34555554 57899999999999999999999


Q ss_pred             EeecccccccccCccchhhhcCCCCCCeeEEccCCcCC-----CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCc
Q 037144          267 HVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLF-----TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPK  341 (502)
Q Consensus       267 hVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~-----~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~  341 (502)
                      +|++-.-+..++.+. ..+     ++|.++.+.++|+.     +| ..|++.+++.-  .+.   .|..+.....+   .
T Consensus       227 ~~~ad~~al~ll~~P-ge~-----GaDi~vg~~q~fg~p~g~GGP-~aG~~a~~~~l--~r~---lPgrivG~s~D---~  291 (939)
T TIGR00461       227 SVAADLMALTLLTPP-GHY-----GADIVLGSSQRFGVPMGYGGP-HAAFFAVKDEY--NRK---MPGRIVGVSKD---A  291 (939)
T ss_pred             EEEechHHhCCcCCH-HHc-----CCcEEeeCCCccCCCCCCCCC-ceeeeeecHhh--Hhh---CCCCceeEEec---C
Confidence            996544333333322 222     89999555555543     34 48888887652  222   23333221111   1


Q ss_pred             ccccCCCccccc----CCCCCCc----------hHHHHH--HHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC
Q 037144          342 EQEVGYKDWQIT----LCRRFRS----------LKLWVV--IRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR  405 (502)
Q Consensus       342 ~~~~~~~~~~~~----~sr~~~a----------l~~~~~--l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~  405 (502)
                      .+...+. ++++    --||-.+          +++.++  +.++|.+|++++.++...++.+|.+.|.+ .|++++.++
T Consensus       292 ~G~~~~~-l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~-~G~~~~~~~  369 (939)
T TIGR00461       292 LGNTALR-LALQTREQHIRRDKATSNICTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLEN-DPHELINKT  369 (939)
T ss_pred             CCCccce-eecccccccccccccCcchhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHh-CCCcccCCC
Confidence            1111111 1111    2344322          232333  56679999999999999999999999998 599998877


Q ss_pred             CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcH
Q 037144          406 NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTME  485 (502)
Q Consensus       406 ~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~  485 (502)
                      .+..+.++.....                             ..++.+++.++|+. +..   .....+++|+.. .+++
T Consensus       370 fF~~~~v~~~~~~-----------------------------~~~i~~~~~~~gi~-l~~---~~~~~i~~s~~E-~~t~  415 (939)
T TIGR00461       370 WFDTLTVKVGNGI-----------------------------SSELLKAAEEFNIN-LRA---VDTTTVGIALDE-TTTK  415 (939)
T ss_pred             ccceEEEEeCCCC-----------------------------HHHHHHHHHHCCCe-eee---cCCCEEEEEeec-CCCH
Confidence            7778888763111                             34677777788875 222   223479999875 4667


Q ss_pred             HHHHHHHHHHH
Q 037144          486 SHVRAAWTVVQ  496 (502)
Q Consensus       486 ~di~~~~~~l~  496 (502)
                      +||+.+++.+.
T Consensus       416 ~di~~l~~~~~  426 (939)
T TIGR00461       416 ADVENLLKVFD  426 (939)
T ss_pred             HHHHHHHHHhc
Confidence            79999999884

This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.

>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase

Probab=99.75  E-value=5.2e-16  Score=155.20  Aligned_cols=273  Identities=14%  Similarity=0.050  Sum_probs=175.0

Q ss_pred             HHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCC
Q 037144          119 NIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGID  198 (502)
Q Consensus       119 ~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg  198 (502)
                      .++++++++++|.+.+       ..++|+|+++++.. +..+..           ++ .|+++...|..+...++..|+ 
T Consensus        50 ~~lr~~la~~~~~~~~-------~i~~t~G~~~~i~~-~~~~l~-----------~g-~vl~~~p~y~~~~~~~~~~g~-  108 (330)
T TIGR01140        50 DELRAAAAAYYGLPAA-------SVLPVNGAQEAIYL-LPRLLA-----------PG-RVLVLAPTYSEYARAWRAAGH-  108 (330)
T ss_pred             HHHHHHHHHHhCCChh-------hEEECCCHHHHHHH-HHHHhC-----------CC-eEEEeCCCcHHHHHHHHHcCC-
Confidence            3455667777887643       57888888877654 332221           34 466777888899999999999 


Q ss_pred             CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hhHHHHHHHHhCCEEEeecccccc
Q 037144          199 RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGS  275 (502)
Q Consensus       199 ~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~eI~~i~~~~g~~lhVDaA~g~~  275 (502)
                        +++.++         |++.|++++++ +      .+|+++.++|++|.+-+   +++|+++|+++|+++++|.+|..+
T Consensus       109 --~~~~~~---------d~~~l~~~~~~-~------~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~  170 (330)
T TIGR01140       109 --EVVELP---------DLDRLPAALEE-L------DVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDF  170 (330)
T ss_pred             --EEEEeC---------CHHHHHhhccc-C------CEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECccccc
Confidence              888876         67888888732 2      26778889999999987   667788889999999999999765


Q ss_pred             cccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccC
Q 037144          276 ACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITL  354 (502)
Q Consensus       276 ~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~  354 (502)
                      ... +....... ...-+.++.+++|+++.| ..+|+++.++. .+. .+...   ...                ++   
T Consensus       171 ~~~-~~~~~~~~-~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~-~~~-~l~~~---~~~----------------~~---  224 (330)
T TIGR01140       171 TPD-ASLAPQAA-RFPGLVVLRSLTKFFGLAGLRLGFVVAHPA-LLA-RLREA---LGP----------------WT---  224 (330)
T ss_pred             CCc-cchhhHhc-cCCCEEEEEecchhhcCchhhhhheeCCHH-HHH-HHHhc---CCC----------------CC---
Confidence            432 11111111 113457778899999844 56788887543 322 22111   000                00   


Q ss_pred             CCCCCchHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcc
Q 037144          355 CRRFRSLKLWVVIRNFGV-ANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYD  433 (502)
Q Consensus       355 sr~~~al~~~~~l~~~g~-~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~  433 (502)
                         ...+...++.+.+.. +......++...+.+++.+.|++++.+++. ++...++++...+                 
T Consensus       225 ---~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~f~~~~~~~-----------------  283 (330)
T TIGR01140       225 ---VNGPARAAGRAALADTAWQAATRARLAAERARLAALLARLGGLEVV-GGTALFLLVRTPD-----------------  283 (330)
T ss_pred             ---chHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhCCCceEC-CCCCeEEEEEcCC-----------------
Confidence               122333444444433 334667788889999999999998666654 3333333333211                 


Q ss_pred             cccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC--CEEEEEEEecCCCCcHHHHHHHHHHH
Q 037144          434 QYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG--GIYVLRFAAGNSMTMESHVRAAWTVV  495 (502)
Q Consensus       434 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lR~~~~~~~t~~~di~~~~~~l  495 (502)
                                    ..++.++|.+.|..+.++..+.  +..++|++++.   ..++ ++++++|
T Consensus       284 --------------~~~l~~~l~~~gi~v~pg~~f~~~~~~~iRi~~~~---~~~~-~~~~~~l  329 (330)
T TIGR01140       284 --------------AAALHEALARRGILIRDFDNFPGLDPRYLRFALPT---DEEN-DRLEEAL  329 (330)
T ss_pred             --------------HHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEecC---HHHH-HHHHHhh
Confidence                          2357777877787655554443  34699999863   4445 8888766

This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.

>cd00610 OAT_like Acetyl ornithine aminotransferase family

Probab=99.75  E-value=1.3e-15  Score=157.28  Aligned_cols=316  Identities=11%  Similarity=0.060  Sum_probs=188.3

Q ss_pred             hHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHH
Q 037144          114 AVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQ  193 (502)
Q Consensus       114 ~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~  193 (502)
                      ....+.++.+.+++++|.+.+       ..++++||++|+..++..++... +       ++.+++.+...|.+...+..
T Consensus        77 ~~~~~~~l~~~l~~~~~~~~~-------~v~~~~sgsea~~~al~~~~~~~-~-------~~~ii~~~~~yhg~~~~~~~  141 (413)
T cd00610          77 YNEPAVELAELLLALTPEGLD-------KVFFVNSGTEAVEAALKLARAYT-G-------RKKIISFEGAYHGRTLGALS  141 (413)
T ss_pred             CCHHHHHHHHHHHHhCCCCCC-------EEEEcCcHHHHHHHHHHHHHHHc-C-------CCeEEEECCCcCCccHHHHH
Confidence            356677788889999885333       58999999999999999887531 0       23444445556665554444


Q ss_pred             HcCCC---------CCCEEEEecCCC----CCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHH
Q 037144          194 IVGID---------RKNIRAIKTTKS----SSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLC  256 (502)
Q Consensus       194 ~~Glg---------~~~v~~v~~~~~----~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~  256 (502)
                      ..+-.         ...++.+|.+..    .++..|+++|++.+++.   +..+.+|+++...+++|.+.|    +++|.
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~  218 (413)
T cd00610         142 LTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEH---PEEVAAVIVEPIQGEGGVIVPPPGYLKALR  218 (413)
T ss_pred             hcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcC---CCCEEEEEEccccCCCCCccCCHHHHHHHH
Confidence            33220         114677776521    12355899999988652   123457777777778898877    99999


Q ss_pred             HHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccC
Q 037144          257 DVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEAT  336 (502)
Q Consensus       257 ~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~  336 (502)
                      ++|++||+++++|.+|+++............++ ..|.++++  |+++.++.+|+++.+ +... +.+. ...+....  
T Consensus       219 ~l~~~~~~~li~Dev~~g~g~~g~~~~~~~~~~-~~d~~t~s--K~l~~g~~~g~~~~~-~~~~-~~~~-~~~~~~~~--  290 (413)
T cd00610         219 ELCRKHGILLIADEVQTGFGRTGKMFAFEHFGV-EPDIVTLG--KGLGGGLPLGAVLGR-EEIM-DAFP-AGPGLHGG--  290 (413)
T ss_pred             HHHHHcCCEEEEeccccCCCcCcchhhHhhcCC-CCCeEEEc--ccccCccccEEEEEc-HHHH-Hhhc-cCCCCCCC--
Confidence            999999999999999976422111101001122 45766554  999887889988764 3332 2220 00111000  


Q ss_pred             CCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC-eEEe--cCCCeeEEEEE
Q 037144          337 DQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKR-FEVA--FPRNFSLVCFR  413 (502)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~-~~l~--~~~~~~~v~f~  413 (502)
                                    +. .+.+.....+.++++.+..   .++.++..++++++++.|+++.. ..++  ......++++.
T Consensus       291 --------------t~-~~~~~~~~a~~a~l~~l~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~  352 (413)
T cd00610         291 --------------TF-GGNPLACAAALAVLEVLEE---EGLLENAAELGEYLRERLRELAEKHPLVGDVRGRGLMIGIE  352 (413)
T ss_pred             --------------CC-CcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCcEEEeecCceEEEEE
Confidence                          00 0111122344455555433   35667788888888888876521 1111  12345667776


Q ss_pred             eecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHH
Q 037144          414 VTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWT  493 (502)
Q Consensus       414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~  493 (502)
                      +.+....                    ..........+.+.+.++|..+ .+..   ...+|++++. ..++++|+++++
T Consensus       353 ~~~~~~~--------------------~~~~~~~~~~~~~~l~~~gv~v-~~~~---~~~lR~~~~~-~~t~~~i~~~~~  407 (413)
T cd00610         353 LVKDRAT--------------------KPPDKELAAKIIKAALERGLLL-RPSG---GNVIRLLPPL-IITEEEIDEGLD  407 (413)
T ss_pred             EecCCCc--------------------CCcchHHHHHHHHHHHHCCeEE-eecC---CCEEEEECCC-cCCHHHHHHHHH
Confidence            6542100                    0000122456778888888643 3321   4579999864 456679999999


Q ss_pred             HHHHH
Q 037144          494 VVQEH  498 (502)
Q Consensus       494 ~l~~~  498 (502)
                      .|+++
T Consensus       408 ~l~~~  412 (413)
T cd00610         408 ALDEA  412 (413)
T ss_pred             HHHHh
Confidence            99875

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.

>PRK07503 methionine gamma-lyase; Provisional

Probab=99.75  E-value=6.7e-16  Score=157.96  Aligned_cols=221  Identities=14%  Similarity=0.125  Sum_probs=153.8

Q ss_pred             cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh--
Q 037144          110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA--  187 (502)
Q Consensus       110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s--  187 (502)
                      ..|...++|+    .+++++|.+.         .+++++|+.|+..++.+...           +++.|+++...|..  
T Consensus        63 ~~p~~~~le~----~lA~l~g~~~---------~i~~~sG~~Al~~~l~~ll~-----------~Gd~Viv~~~~y~~t~  118 (403)
T PRK07503         63 SNPTLALLEQ----RMASLEGGEA---------AVALASGMGAITATLWTLLR-----------PGDEVIVDQTLYGCTF  118 (403)
T ss_pred             CCchHHHHHH----HHHHHhCCCc---------EEEEcCHHHHHHHHHHHHcC-----------CCCEEEEccCccchHH
Confidence            4555566664    4788888753         47788888887766654322           67788888777643  


Q ss_pred             --HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144          188 --FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW  265 (502)
Q Consensus       188 --~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~  265 (502)
                        ....+...|+   +++.++.+       |+++|++++++.++      +|++..++|++|.+.|+++|+++|+++|++
T Consensus       119 ~~~~~~~~~~G~---~v~~vd~~-------d~~~l~~~i~~~tk------lV~le~p~NPtG~~~di~~I~~la~~~gi~  182 (403)
T PRK07503        119 AFLHHGLGEFGV---TVRHVDLT-------DPAALKAAISDKTR------MVYFETPANPNMRLVDIAAVAEIAHGAGAK  182 (403)
T ss_pred             HHHHHHHhhCCE---EEEEeCCC-------CHHHHHHhcCccCc------EEEEeCCCCCCCeeeCHHHHHHHHHHcCCE
Confidence              3345566788   88888753       78999999876443      788889999999999999999999999999


Q ss_pred             EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCccc
Q 037144          266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQ  343 (502)
Q Consensus       266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~  343 (502)
                      +++|++|+.+....+ ..      .++|.++.+++|+++++.+  .|+++ .+++.............            
T Consensus       183 lIvD~a~a~~~~~~~-l~------~g~Di~v~S~tK~l~g~gd~~gG~v~-~~~~l~~~l~~~~~~~~------------  242 (403)
T PRK07503        183 VVVDNTYCTPYLQRP-LE------LGADLVVHSATKYLGGHGDITAGLVV-GGKALADRIRLEGLKDM------------  242 (403)
T ss_pred             EEEECCCcccccCCc-hh------hCCCEEEccccccccCCCceeEEEEE-cCHHHHHHHHhhhHHhC------------
Confidence            999999976543211 11      1789999999999987654  55554 55543322110000000            


Q ss_pred             ccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144          344 EVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA  402 (502)
Q Consensus       344 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~  402 (502)
                                .+-+...+..|..++  +.+.+..++++..+++..+.+.|+++|.++.+
T Consensus       243 ----------~g~~~s~~~a~l~l~--~L~tl~~r~~~~~~na~~~a~~L~~~p~v~~V  289 (403)
T PRK07503        243 ----------TGAVMSPFDAFLLMR--GLKTLALRMDRHCASAQAVAEWLARHPAVELV  289 (403)
T ss_pred             ----------cCCCCCHHHHHHHHc--CcchHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence                      011224556666665  45777888899999999999999999887754

>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.75  E-value=9.3e-16  Score=157.53  Aligned_cols=241  Identities=13%  Similarity=0.116  Sum_probs=153.5

Q ss_pred             cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144          110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ  189 (502)
Q Consensus       110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~  189 (502)
                      ..|...++|++    ++++.|.+         ..+++++|++|+..++.+...           +++.|+++...|....
T Consensus        56 ~~pt~~~Le~~----lA~l~g~~---------~~l~~ssG~~Ai~~al~al~~-----------~Gd~Vl~~~~~Y~~t~  111 (425)
T PRK06084         56 MNPTNDVLEQR----VAALEGGV---------GALAVASGMAAITYAIQTIAE-----------AGDNIVSVAKLYGGTY  111 (425)
T ss_pred             CCchHHHHHHH----HHHHhCCC---------ceeEehhHHHHHHHHHHHHhC-----------CCCEEEEeCCCcchHH
Confidence            34555555554    67777753         357888999888777766543           5667777777666443


Q ss_pred             HHH-H---HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144          190 KAA-Q---IVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW  265 (502)
Q Consensus       190 ~aa-~---~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~  265 (502)
                      ..+ .   ..|+   .+..++.       .|+++|+++|+++++      +|+++.++|++|.+-|+++|.++|+++|++
T Consensus       112 ~~~~~~l~~~gi---~v~~~d~-------~d~e~le~ai~~~tk------lV~lesp~NPtG~v~dl~~I~~la~~~~i~  175 (425)
T PRK06084        112 NLLAHTLPRIGI---ETRFAAH-------DDIAALEALIDERTK------AVFCESIGNPAGNIIDIQALADAAHRHGVP  175 (425)
T ss_pred             HHHHHhccccee---EEEEECC-------CCHHHHHHHhccCCc------EEEEeCCCCCCCeecCHHHHHHHHHHcCCE
Confidence            333 2   2455   5555542       489999999976543      788889999999999999999999999999


Q ss_pred             EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc-ceEEEeeCch-hhhhh------h-cCCcccccCccC
Q 037144          266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD-CCCLWVKDPS-CLLST------L-STNPQYLKNEAT  336 (502)
Q Consensus       266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~-~g~~~~r~~~-~l~~~------~-~~~~~yl~~~~~  336 (502)
                      ++||++|+.+....+ ..      .++|.++.++||+++++.. .|.+++.+.. .....      + ...+.|..-...
T Consensus       176 vVvD~a~a~~~~~~p-~~------~gaDivv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (425)
T PRK06084        176 LIVDNTVATPVLCRP-FE------HGADIVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTYT  248 (425)
T ss_pred             EEEECCCcccccCCh-hh------cCCCEEEECchhcccccccceeEEEEeCCccchhhccccccccccCCcccccchhh
Confidence            999999986544322 11      1799999999999987643 3444443221 10000      0 111222110000


Q ss_pred             CCCCcccccCCC-----cccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144          337 DQEPKEQEVGYK-----DWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA  402 (502)
Q Consensus       337 ~~~~~~~~~~~~-----~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~  402 (502)
                      .   ..+.....     ......+-+..+..+|..++  |.+.+..++++..+++..+.+.|+++|+++-+
T Consensus       249 ~---~~g~~~~~~~~~~~~~~~~g~~l~~~~a~l~lr--gl~tl~~R~~~~~~na~~la~~L~~~p~v~~V  314 (425)
T PRK06084        249 E---AFGPAAFIGRCRVVPLRNMGAALSPFNAFLILQ--GLETLALRMERHTENALKVARYLQQHPQVAWV  314 (425)
T ss_pred             h---hcchHHHHHHHHHHHHHhcCCCCCHHHHHHHHc--CcCcHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence            0   00000000     00111233345566676665  56888999999999999999999999987644

>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase

Probab=99.74  E-value=6e-16  Score=157.11  Aligned_cols=223  Identities=15%  Similarity=0.143  Sum_probs=154.6

Q ss_pred             cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144          110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ  189 (502)
Q Consensus       110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~  189 (502)
                      ..|...++|    +.++++.|.+         .+++++||++|+..++.+...           +++.|+++...|.+..
T Consensus        49 ~~p~~~~le----~~lA~l~g~~---------~v~~~~gg~~Ai~~~l~all~-----------~GD~Vl~~~p~y~~~~  104 (382)
T TIGR02080        49 GNPTRDLLQ----QALAELEGGA---------GAVVTNTGMSAIHLVTTALLG-----------PDDLLVAPHDCYGGTY  104 (382)
T ss_pred             CCchHHHHH----HHHHHHhCCC---------cEEEEcCHHHHHHHHHHHHcC-----------CCCEEEEcCCCcHHHH
Confidence            344455555    4577887732         478999999988766655432           6778888888887544


Q ss_pred             HHH-HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEe
Q 037144          190 KAA-QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHV  268 (502)
Q Consensus       190 ~aa-~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhV  268 (502)
                      ... .+.+.+.-++..++       ..|++++++++++++      .+|+++.++|++|.+-|+++|+++|+++|++++|
T Consensus       105 ~~~~~~~~~~~~~v~~~d-------~~d~~~l~~ai~~~t------klV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvv  171 (382)
T TIGR02080       105 RLLNALAKKGCFRVLFVD-------QGDEQALRAALAQKP------KLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVV  171 (382)
T ss_pred             HHHHHHHhhcCeEEEEEC-------CCCHHHHHHhcCcCc------eEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEE
Confidence            432 23333111454443       237899999987543      3788899999999999999999999999999999


Q ss_pred             ecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccC
Q 037144          269 DAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVG  346 (502)
Q Consensus       269 DaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~  346 (502)
                      |.+|+.+....+ ..      .++|.++.+++||++++.+  .|++.++++..... +.....++.              
T Consensus       172 D~a~~~~~~~~p-l~------~gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~-l~~~~~~~g--------------  229 (382)
T TIGR02080       172 DNTFLSPALQNP-LA------LGADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEE-LAWWANNLG--------------  229 (382)
T ss_pred             ECCCcccccCCc-hh------hCCCEEEeecceeccCCCCceeEEEEeCCHHHHHH-HHHHHHccC--------------
Confidence            999976543322 11      1689999999999987765  66666666544322 111111111              


Q ss_pred             CCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144          347 YKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA  402 (502)
Q Consensus       347 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~  402 (502)
                               ....++..|..++  |.+-+..++++..+++..+.+.|++.|.++-+
T Consensus       230 ---------~~~sp~~a~l~lr--~l~tl~~R~~~~~~na~~~a~~L~~~p~v~~V  274 (382)
T TIGR02080       230 ---------VTGGAFDSYLTLR--GLRTLVARMRLQQRNAQAIVEYLQTQPLVKKI  274 (382)
T ss_pred             ---------CCCCHHHHHHHHc--ccchHHHHHHHHHHHHHHHHHHHHhCCCeeEE
Confidence                     1124566777765  55778888999999999999999999988744

This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.

>PRK06425 histidinol-phosphate aminotransferase; Validated

Probab=99.74  E-value=1.3e-15  Score=152.42  Aligned_cols=279  Identities=10%  Similarity=0.033  Sum_probs=179.8

Q ss_pred             HHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCC
Q 037144          120 IVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDR  199 (502)
Q Consensus       120 ~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~  199 (502)
                      ++++.+++.+|.+..       ..++|+|+++++..++. +..           ++.+|+. ++++..+..+++..|+  
T Consensus        44 ~lr~~ia~~~~~~~~-------~I~it~Gs~~~l~~~~~-~~~-----------~~~vv~~-~P~y~~y~~~~~~~G~--  101 (332)
T PRK06425         44 DIEDQIKIYTQGLKI-------KVLIGPGLTHFIYRLLS-YIN-----------VGNIIIV-EPNFNEYKGYAFTHGI--  101 (332)
T ss_pred             HHHHHHHHHhCCCcc-------eEEECCCHHHHHHHHHH-HhC-----------CCcEEEe-CCChHHHHHHHHHcCC--
Confidence            455667888888765       58899999998866553 221           4445544 7889999999999999  


Q ss_pred             CCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hhHHHHHHHHhCCEEEeeccccccc
Q 037144          200 KNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSA  276 (502)
Q Consensus       200 ~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~eI~~i~~~~g~~lhVDaA~g~~~  276 (502)
                       +++.||++.   ..+|++.+++   .      ++.+|+++.++|+||.+-+   +++|+++|+++|+|+++|.+|+.+.
T Consensus       102 -~v~~vp~~~---~~~~~~~l~~---~------~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~  168 (332)
T PRK06425        102 -RISALPFNL---INNNPEILNN---Y------NFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFV  168 (332)
T ss_pred             -eEEEEeCCc---ccCcHHHHhh---c------CCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhccc
Confidence             999999874   3456655542   1      1336777899999999855   6777778899999999999997664


Q ss_pred             ccCccchhhhcCCCCC-C-eeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCccccc
Q 037144          277 CICPEFRHFIDGVECV-D-SFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQIT  353 (502)
Q Consensus       277 ~~~~~~~~~~~~~~~a-D-si~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~  353 (502)
                      ...  ........... . .+..++.|.++ ....+|+++.. +............+                    .. 
T Consensus       169 ~~~--~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~-~~li~~l~~~~~~~--------------------~~-  224 (332)
T PRK06425        169 PNR--AEEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATD-DYNMKISRKITEPW--------------------SV-  224 (332)
T ss_pred             ccc--chhHHHHhccCCCEEEEeecHHhcCCchhhheeeecC-HHHHHHHHHcCCCC--------------------cc-
Confidence            321  11111111111 2 34457999998 55667887663 33332221111111                    00 


Q ss_pred             CCCCCCchHHHHHHHHhcHHH-HHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCc
Q 037144          354 LCRRFRSLKLWVVIRNFGVAN-LRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTY  432 (502)
Q Consensus       354 ~sr~~~al~~~~~l~~~g~~g-~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~  432 (502)
                           ....+ .++.....+. .++..+...+.++++.+.|++. ++++..++..+.++++++ .               
T Consensus       225 -----~~~~~-~~l~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~~~~g~f~~~~~~-~---------------  281 (332)
T PRK06425        225 -----CDPAI-DFIRSIDLDYVAKHSLDIMENERSYLINNLEAM-GFRAAGDPSANFITFMIP-D---------------  281 (332)
T ss_pred             -----CHHHH-HHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHC-CCEECCCCCceEEEEEcC-C---------------
Confidence                 11111 1222222222 3566777888899999999988 788765566666666653 1               


Q ss_pred             ccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC--CEEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144          433 DQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG--GIYVLRFAAGNSMTMESHVRAAWTVVQEHL  499 (502)
Q Consensus       433 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lR~~~~~~~t~~~di~~~~~~l~~~~  499 (502)
                                     ..++.+.+.++|..+..+..+.  +..++|+++.    +.++.++++++|+++.
T Consensus       282 ---------------~~~~~~~l~~~gi~v~~~~~f~~~~~~~iRis~~----~~~~~~~l~~al~~~~  331 (332)
T PRK06425        282 ---------------AHDFYSYLLKNGILVRLLDDYECLGEQYIRIAIR----RRSFNIKLVNALRNFL  331 (332)
T ss_pred             ---------------HHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEeC----CHHHHHHHHHHHHHHh
Confidence                           2456677777787665554442  2469999986    4569999999998764

>PRK03321 putative aminotransferase; Provisional

Probab=99.74  E-value=7.3e-16  Score=155.69  Aligned_cols=288  Identities=13%  Similarity=0.061  Sum_probs=181.5

Q ss_pred             hhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHH
Q 037144          112 PAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKA  191 (502)
Q Consensus       112 p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a  191 (502)
                      ++..+++    +.+++++|.+.+       ..++|+|+++++..++.....           +++.|+++...+..+...
T Consensus        57 ~g~~~lr----~~ia~~~~~~~~-------~I~~~~G~~~~l~~~~~~~~~-----------~gd~Vli~~p~y~~~~~~  114 (352)
T PRK03321         57 MGAVELR----AALAEHLGVPPE-------HVAVGCGSVALCQQLVQATAG-----------PGDEVIFAWRSFEAYPIL  114 (352)
T ss_pred             CcHHHHH----HHHHHHhCcCHH-------HEEECCCHHHHHHHHHHHhcC-----------CCCEEEeCCCCHHHHHHH
Confidence            3444444    445666676543       578888877766544433221           677788887777777777


Q ss_pred             HHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHH--hCCEEEee
Q 037144          192 AQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQ--FGIWVHVD  269 (502)
Q Consensus       192 a~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~--~g~~lhVD  269 (502)
                      ++..|+   +++.+|+++  ++.+|++++++++++.+      .+|+++.++|++|.+-|+++|.++|++  +|+++++|
T Consensus       115 ~~~~g~---~~~~v~~~~--~~~~~~~~l~~~~~~~~------~~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~ii~D  183 (352)
T PRK03321        115 VQVAGA---TPVQVPLTP--DHTHDLDAMAAAITDRT------RLIFVCNPNNPTGTVVTPAELARFLDAVPADVLVVLD  183 (352)
T ss_pred             HHHcCC---EEEEccCCC--CCCCCHHHHHHhhccCC------CEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEe
Confidence            888999   999999874  35899999999886533      377778999999999999999999987  59999999


Q ss_pred             cccccccccCccchhhhcCCC-CCCee-EEccCCcCCCC-CcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccC
Q 037144          270 AAYAGSACICPEFRHFIDGVE-CVDSF-SFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVG  346 (502)
Q Consensus       270 aA~g~~~~~~~~~~~~~~~~~-~aDsi-~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~  346 (502)
                      ++|+.+..... ....+..+. .-+.+ +.++.|.++.| ..+|+++.. +... +.+...  +  ..            
T Consensus       184 e~y~~~~~~~~-~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~-~~~~-~~~~~~--~--~~------------  244 (352)
T PRK03321        184 EAYVEYVRDDD-VPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGH-PEVI-AALRKV--A--VP------------  244 (352)
T ss_pred             chHHHhccCcC-CCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCC-HHHH-HHHHHh--c--CC------------
Confidence            99976543211 101011111 12334 45689999744 457777763 3332 222211  0  00            


Q ss_pred             CCcccccCCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhh
Q 037144          347 YKDWQITLCRRFRSLKLWVVIRNF-GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRT  425 (502)
Q Consensus       347 ~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~  425 (502)
                         +      ....+...++...+ ..+.+.+.+++..+.++++.+.|++. ++.+. ++..+.+.++....        
T Consensus       245 ---~------~~s~~~q~~a~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~-~~~~~-~~~g~~i~i~l~~~--------  305 (352)
T PRK03321        245 ---F------SVNSLAQAAAIASLAAEDELLERVDAVVAERDRVRAALRAA-GWTVP-PSQANFVWLPLGER--------  305 (352)
T ss_pred             ---C------CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCccC-CCCCCEEEEeCCCC--------
Confidence               0      01233333333333 23445556666667777888888886 67653 44444544444211        


Q ss_pred             cccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144          426 KYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       426 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~  500 (502)
                                            ..++.+.+.+.|..+ .+  + +...+|++++    +.+++++++++|+++..
T Consensus       306 ----------------------~~~~~~~l~~~gI~v-~~--~-~~~~iRi~~~----~~~~~~~~~~al~~~~~  350 (352)
T PRK03321        306 ----------------------TADFAAAAAEAGVVV-RP--F-AGEGVRVTIG----APEENDAFLRAARAWRA  350 (352)
T ss_pred             ----------------------HHHHHHHHHHCCEEE-Ec--c-CCCcEEEeeC----CHHHHHHHHHHHHHHhc
Confidence                                  235667777778654 33  2 3346999975    56699999999988754

>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.74  E-value=8.3e-16  Score=158.27  Aligned_cols=239  Identities=13%  Similarity=0.079  Sum_probs=159.4

Q ss_pred             cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhH-
Q 037144          110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAF-  188 (502)
Q Consensus       110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~-  188 (502)
                      .+|....+|+    .++++.|.+.         .+++++|+.|+..++.+...           +++.|+++...|.+. 
T Consensus        61 ~~p~~~~le~----~lA~l~g~~~---------al~~~SG~~Ai~~al~all~-----------pGd~VIv~~~~y~~t~  116 (427)
T PRK05994         61 TNPTNAVLEE----RVAALEGGTA---------ALAVASGHAAQFLVFHTLLQ-----------PGDEFIAARKLYGGSI  116 (427)
T ss_pred             CCccHHHHHH----HHHHHhCCCc---------EEEEcCHHHHHHHHHHHHhC-----------CCCEEEEecCcchhHH
Confidence            3455555555    4778887653         68889999999877766533           677888888888753 


Q ss_pred             ---HHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144          189 ---QKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW  265 (502)
Q Consensus       189 ---~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~  265 (502)
                         ...+...|+   .++.++.+       |+++++++|++.+      .+|+++.++|++|.+-|+++|+++|+++|++
T Consensus       117 ~~~~~~~~~~G~---~v~~vd~~-------d~~~l~~ai~~~t------klV~vesp~NptG~v~dl~~I~~la~~~gi~  180 (427)
T PRK05994        117 NQFGHAFKSFGW---QVRWADAD-------DPASFERAITPRT------KAIFIESIANPGGTVTDIAAIAEVAHRAGLP  180 (427)
T ss_pred             HHHHHHHHhcCc---EEEEECCC-------CHHHHHHhcCcCC------eEEEEECCCCCCCeecCHHHHHHHHHHcCCE
Confidence               334567788   88888642       7899999987543      3788899999999999999999999999999


Q ss_pred             EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc-ceEEEeeCch-hhhhhhcCCcccccCccCCCCCccc
Q 037144          266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD-CCCLWVKDPS-CLLSTLSTNPQYLKNEATDQEPKEQ  343 (502)
Q Consensus       266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~-~g~~~~r~~~-~l~~~~~~~~~yl~~~~~~~~~~~~  343 (502)
                      ++||++++.+...-+ ..      .++|.++.++||+++.+.+ .|.+++.... .+. . .....++......   .++
T Consensus       181 livD~a~a~~~~~~p-l~------~gaDivv~S~tK~lgg~~~~~gG~v~~~~~~~~~-~-~k~~~~~~~~~~~---~~~  248 (427)
T PRK05994        181 LIVDNTLASPYLIRP-IE------HGADIVVHSLTKFLGGHGNSMGGIIVDGGTFDWS-K-SGKYPMLSEPRPE---YHG  248 (427)
T ss_pred             EEEECCccccccCCc-cc------cCCcEEEEcCccccCCCCCcEEEEEEeCCccccc-c-ccccccccCCcch---hhh
Confidence            999999976543322 11      2899999999999987754 4555553221 100 0 0000111110000   000


Q ss_pred             ccCCCc-------------ccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144          344 EVGYKD-------------WQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA  402 (502)
Q Consensus       344 ~~~~~~-------------~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~  402 (502)
                      ..-..+             ..-..+.....+.+|..++  |.+.+..++++..+++.++.+.|+++|+++-+
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~--~l~tL~~r~~~~~~~a~~la~~L~~~p~v~~v  318 (427)
T PRK05994        249 LVLHETFGNFAFAIAARVLGLRDLGPAISPFNAFLILT--GIETLPLRMQRHSDNALAVAEWLKGHPKVSWV  318 (427)
T ss_pred             hhHHHHhhhhhhHHHHHHHHHHhcCCCCCHHHHHHHHc--CcccHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence            000000             0011233345566666665  56788999999999999999999999988644

>PTZ00376 aspartate aminotransferase; Provisional

Probab=99.74  E-value=1.4e-15  Score=156.51  Aligned_cols=328  Identities=12%  Similarity=0.066  Sum_probs=202.0

Q ss_pred             HHHHHHHHhhcC-CCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEE--EcCCchHHHHHHHHHHHHHHHHH
Q 037144           91 GIVGEMLSSGFN-VVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGV--IQGTTCEALLCTLTAARDRVLKK  167 (502)
Q Consensus        91 ~~~~~~l~~~~n-~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~--~t~ggt~a~~~al~~a~~~~~~~  167 (502)
                      ..+.+.+..... .....|....+..++.+.+.+|+.+..+.+-..     ...+  .|.|++.|...++.+.+. ++. 
T Consensus        50 ~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~-----~~v~~~~t~G~~~al~~~~~~l~~-~~~-  122 (404)
T PTZ00376         50 ESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQKLLFGEASYALAE-----KRIATVQALSGTGALRLGFEFLKR-FLP-  122 (404)
T ss_pred             hHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHhcCCCcccccc-----CeEEEeeccCcchHHHHHHHHHHH-hcC-
Confidence            334444433333 223567777788899999999986654422110     1345  488988887666543321 111 


Q ss_pred             hCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccc
Q 037144          168 IGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAIT  247 (502)
Q Consensus       168 ~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G  247 (502)
                            +++.|++.++++..+...++.+|+   +++.+|+.+++++.+|++.+++++++...   ...+++.+.++|+||
T Consensus       123 ------~Gd~Vlv~~P~y~~~~~~~~~~G~---~~~~v~l~~~~~~~~d~~~l~~~~~~~~~---~~~~~~~~~p~NPTG  190 (404)
T PTZ00376        123 ------AGTTVYVSNPTWPNHVNIFKSAGL---NVKEYRYYDPKTKGLDFDGMLEDLRTAPN---GSVVLLHACAHNPTG  190 (404)
T ss_pred             ------CCCEEEEcCCCchhHHHHHHHcCC---ceeeccccCcccCCcCHHHHHHHHHhCCC---CCEEEEeCCCCCCCC
Confidence                  678899999999999999999999   99999985333579999999999865311   124677789999999


Q ss_pred             cc---CChhHHHHHHHHhCCEEEeecccccccccCc--cchhh--hcCCCCCC-eeEEccCCcCC-CCCcceEEE--eeC
Q 037144          248 AV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICP--EFRHF--IDGVECVD-SFSFNPHKWLF-TTLDCCCLW--VKD  316 (502)
Q Consensus       248 ~i---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~--~~~~~--~~~~~~aD-si~~~~hK~l~-~p~~~g~~~--~r~  316 (502)
                      .+   +.+++|+++|++||+|+++|.+|........  .....  +... .-. .+..++.|.++ .....|+++  +.+
T Consensus       191 ~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~-~~~vi~i~SfSK~~~~~GlRvG~~~~~~~~  269 (404)
T PTZ00376        191 VDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAER-GVEFLVAQSFSKNMGLYGERIGALHIVCAN  269 (404)
T ss_pred             CCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhc-CCcEEEEEeCCCcccccccccceEEEEeCC
Confidence            98   4577888899999999999999976554211  11111  1111 112 44566999998 557788875  345


Q ss_pred             chhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcH--------HHHHHHHHHHHHHHHH
Q 037144          317 PSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGV--------ANLRNFIRSHVGMAKL  388 (502)
Q Consensus       317 ~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~--------~g~~~~~~~~~~la~~  388 (502)
                      +............+.....                 .+   ...+..+++...+..        +.+++..+++.++++.
T Consensus       270 ~~~~~~l~~~~~~~~~~~~-----------------~~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~  329 (404)
T PTZ00376        270 KEEAANVLSQLKLIIRPMY-----------------SS---PPIHGARIADRILSDPELRAEWLSELKEMSGRIQNMRQL  329 (404)
T ss_pred             HHHHHHHHHHHHHHHhhhc-----------------CC---CchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4422111110000000000                 00   022333444443321        1234555677888889


Q ss_pred             HHHHHhcCC---CeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEe
Q 037144          389 FERLVTSDK---RFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTH  465 (502)
Q Consensus       389 l~~~l~~~~---~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~  465 (502)
                      +.+.|++..   +++.. +|..+++.|.-.+                                .++.++|.++..+++.+
T Consensus       330 l~~~L~~~~~~~~~~~~-~p~gg~f~~~~~~--------------------------------~~~~~~L~~~~~v~v~p  376 (404)
T PTZ00376        330 LYDELKALGSPGDWEHI-INQIGMFSFTGLT--------------------------------KEQVERLIEKYHIYLLD  376 (404)
T ss_pred             HHHHHHhcCCCCccccc-ccCceEEEecCCC--------------------------------HHHHHHHHHhCCEeecC
Confidence            999998862   24433 4555665553211                                24455666664445444


Q ss_pred             eeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144          466 AIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       466 ~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~  500 (502)
                      .   +    |+++++  .+.++++.++++|+++..
T Consensus       377 ~---~----Ris~~~--~~~~~~~~~~~~l~~~~~  402 (404)
T PTZ00376        377 N---G----RISVAG--LTSKNVDYVAEAIHDVVR  402 (404)
T ss_pred             C---C----eEEEec--cCHHhHHHHHHHHHHHHh
Confidence            3   2    999964  466699999999998765

>PRK15400 lysine decarboxylase CadA; Provisional

Probab=99.74  E-value=9.7e-16  Score=162.55  Aligned_cols=324  Identities=11%  Similarity=0.097  Sum_probs=198.2

Q ss_pred             HHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCC
Q 037144          121 VMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRK  200 (502)
Q Consensus       121 ~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~  200 (502)
                      ..+..++.||.+.++        ++++|+|.+|..++.++..           +++.|++...+|-|+..++.+.|+   
T Consensus       200 Ae~~AA~~fgAd~ty--------fvvNGTS~~n~av~~a~~~-----------~Gd~VLvdRN~HKSv~haLilsga---  257 (714)
T PRK15400        200 AEEYIARVFNADRSY--------MVTNGTSTANKIVGMYSAP-----------AGSTVLIDRNCHKSLTHLMMMSDV---  257 (714)
T ss_pred             HHHHHHHHhCCCcEE--------EEeCchHHHHHHHHHHhcC-----------CCCEEEeecccHHHHHHHHHHcCC---
Confidence            447789999999864        7888889999877776654           788999999999999999999999   


Q ss_pred             CEEEEecCCCCC---cccC-----HHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccc
Q 037144          201 NIRAIKTTKSSS---YGLS-----AESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAY  272 (502)
Q Consensus       201 ~v~~v~~~~~~~---~~~d-----~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~  272 (502)
                      ..+.++...+.-   +.++     ++.++++|++... .++|+.+++|.+ |..|.+-++++|+++|+.++  +|||.||
T Consensus       258 ~PVYl~P~rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~-ak~p~~~vit~p-TYdG~~yd~~~I~~~~~~~~--ilvDEAw  333 (714)
T PRK15400        258 TPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPN-ATWPVHAVITNS-TYDGLLYNTDFIKKTLDVKS--IHFDSAW  333 (714)
T ss_pred             eEEEecccccccCCccCCCccccCHHHHHHHHHhCcc-ccCccEEEEECC-CCccEecCHHHHHHHhCCCC--EEEEccc
Confidence            999987654221   3445     8999999987543 246778888887 68999999999999999887  7999999


Q ss_pred             ccccccCccchhhhcCC-CCC---C--eeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccC
Q 037144          273 AGSACICPEFRHFIDGV-ECV---D--SFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVG  346 (502)
Q Consensus       273 g~~~~~~~~~~~~~~~~-~~a---D--si~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~  346 (502)
                      |+.+.+.|.++... ++ .++   |  .++-|.||.+.+-..++++.++..-. .+.+.  ..|....            
T Consensus       334 gah~~F~p~~~~~s-am~~ga~~~~~i~vtQStHKtL~alTQaS~LHvkg~vd-~~~~n--~a~~m~~------------  397 (714)
T PRK15400        334 VPYTNFSPIYEGKC-GMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVN-EETFN--EAYMMHT------------  397 (714)
T ss_pred             hhhhccCcccCCcC-hhhcCCCCCCceEEEEchhhcccchhHHhHHHHcCCCC-HHHHH--HHHHHHc------------
Confidence            99887777554221 11 245   5  89999999998877778877754311 01110  1111111            


Q ss_pred             CCcccccCCCCCCchHHHH----HHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC------eEEecCCCe-eEEEEEee
Q 037144          347 YKDWQITLCRRFRSLKLWV----VIRNFGVANLRNFIRSHVGMAKLFERLVTSDKR------FEVAFPRNF-SLVCFRVT  415 (502)
Q Consensus       347 ~~~~~~~~sr~~~al~~~~----~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~------~~l~~~~~~-~~v~f~~~  415 (502)
                             .+.+  ...+.+    +.+.+....-.+++++..+++..|++.|.++++      |+++.+... ..-||.+.
T Consensus       398 -------STSP--sY~l~ASLD~a~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~  468 (714)
T PRK15400        398 -------TTSP--HYGIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLR  468 (714)
T ss_pred             -------CCCc--HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccC
Confidence                   1111  111222    222232222356778888999999999988887      777743311 11234433


Q ss_pred             cCc-chhhhh-hcc---cCCCcccccccc-----hhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcH
Q 037144          416 PSA-VMDKLR-TKY---KNGTYDQYRQFS-----EEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTME  485 (502)
Q Consensus       416 ~~~-~~~~~~-~~~---~~~~~~~~~~~~-----~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~  485 (502)
                      |.. ..+.+. .+.   .+-.+....++.     +.++..--...+.+.|.+.|++ +-.   .+...+=+.+ ++..++
T Consensus       469 p~~~whgf~~~~~~~~~lDP~Klti~tpgi~~~g~~~~~Gipg~~v~~~L~e~gI~-~E~---~d~~~iLfl~-s~g~t~  543 (714)
T PRK15400        469 SDSTWHGFKNIDNEHMYLDPIKVTLLTPGMKKDGTMSDFGIPASIVAKYLDEHGIV-VEK---TGPYNLLFLF-SIGIDK  543 (714)
T ss_pred             ccccccCcccccccccccCCceEEEEeCCCCCCccccccCCCHHHHHHHHHHcCCE-EEe---cCCCeEEEEe-CCCCCH
Confidence            221 000000 000   000000000000     0000111123455566666753 222   2233344444 466788


Q ss_pred             HHHHHHHHHHHHHHH
Q 037144          486 SHVRAAWTVVQEHLE  500 (502)
Q Consensus       486 ~di~~~~~~l~~~~~  500 (502)
                      +++++++++|.++.+
T Consensus       544 ~~~~~L~~aL~~f~~  558 (714)
T PRK15400        544 TKALSLLRALTDFKR  558 (714)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            899999999987643

>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed

Probab=99.74  E-value=1.1e-15  Score=154.97  Aligned_cols=309  Identities=13%  Similarity=0.092  Sum_probs=188.7

Q ss_pred             HHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCC-CccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144           91 GIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLP-KSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG  169 (502)
Q Consensus        91 ~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~-~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~  169 (502)
                      ..+.+.+....+.  ..|....+..++.+.+.+|+.+.+|.+ -+.     ...++|+|+++++..++.+..-.      
T Consensus        43 ~~~~~~~~~~~~~--~~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~-----~~I~it~G~~~~i~~~~~~l~~~------  109 (364)
T PRK07865         43 PVIQEALAAAADA--PGYPTTAGTPELREAIVGWLARRRGVTGLDP-----AAVLPVIGSKELVAWLPTLLGLG------  109 (364)
T ss_pred             HHHHHHHHHHHhh--CCCCCccCCHHHHHHHHHHHHHHcCCCCCCc-----ccEEEccChHHHHHHHHHHHcCC------
Confidence            4455555444332  256655667889999999999988764 211     26889999988876544433111      


Q ss_pred             ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144          170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV  249 (502)
Q Consensus       170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i  249 (502)
                          +++.|+++..+|..+..+++.+|+   +++.++.         ++++++   .      .+.+|+++.++|+||.+
T Consensus       110 ----~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~---------~~~l~~---~------~~~~v~~~~p~NPtG~~  164 (364)
T PRK07865        110 ----PGDVVVIPELAYPTYEVGARLAGA---TVVRADS---------LTELGP---Q------RPALIWLNSPSNPTGRV  164 (364)
T ss_pred             ----CCCEEEECCCCcccHHHHHHhcCC---EEEecCC---------hhhCCc---c------cceEEEEcCCCCCCCcc
Confidence                677889999999999999999999   7777642         222221   1      23477777899999987


Q ss_pred             ---CChhHHHHHHHHhCCEEEeecccccccccCccchhh---hcCCC-CCCeeEEccCCcCCCC-CcceEEEeeCchhhh
Q 037144          250 ---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF---IDGVE-CVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLL  321 (502)
Q Consensus       250 ---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~---~~~~~-~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~  321 (502)
                         +.+++|.++|+++|+++++|.+|+......+.....   ..+.. .-..++.+++|.++.| ..+|+++. ++....
T Consensus       165 ~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~-~~~~~~  243 (364)
T PRK07865        165 LGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVAG-DPALVA  243 (364)
T ss_pred             CCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCCceeeEEEec-CHHHHH
Confidence               457788899999999999999997654321111100   00000 1126677899998644 45666544 444332


Q ss_pred             hhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 037144          322 STLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG-VANLRNFIRSHVGMAKLFERLVTSDKRFE  400 (502)
Q Consensus       322 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~~~~  400 (502)
                      . +.....+...                       ....+...++.+.+. .+.+++..+.+.++++.+.+.|++. |+.
T Consensus       244 ~-~~~~~~~~~~-----------------------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~  298 (364)
T PRK07865        244 E-LLEVRKHAGM-----------------------MVPAPVQAAMVAALGDDAHVREQRERYARRRAVLRPALEAA-GFR  298 (364)
T ss_pred             H-HHHHHHhcCC-----------------------CcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHc-CCc
Confidence            2 2111000000                       001222222333332 3445667777888889999999886 777


Q ss_pred             EecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC--CEEEEEEEe
Q 037144          401 VAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG--GIYVLRFAA  478 (502)
Q Consensus       401 l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lR~~~  478 (502)
                      +. +++.+++.|...+..                             ...+.+.+.+.|..+.++..+.  +..++|+++
T Consensus       299 ~~-~~~~~~~~~~~~~~~-----------------------------~~~~~~~l~~~gv~v~pg~~f~~~~~~~iRi~~  348 (364)
T PRK07865        299 VD-HSEAGLYLWATRGED-----------------------------CWDTVAWLAERGILVAPGDFYGPAGAQHVRVAL  348 (364)
T ss_pred             cc-CCCccEEEEEeCCCC-----------------------------HHHHHHHHHHCCEEEeCccccCcCCCCEEEEEe
Confidence            65 455555443322211                             1245566667787655544332  356999998


Q ss_pred             cCCCCcHHHHHHHHHHHH
Q 037144          479 GNSMTMESHVRAAWTVVQ  496 (502)
Q Consensus       479 ~~~~t~~~di~~~~~~l~  496 (502)
                      +.   ++++++++++.|+
T Consensus       349 ~~---~~~~~~~~~~~l~  363 (364)
T PRK07865        349 TA---TDERIAAAVERLA  363 (364)
T ss_pred             cC---CHHHHHHHHHHhh
Confidence            74   4679999998774

>PRK15399 lysine decarboxylase LdcC; Provisional

Probab=99.74  E-value=5.1e-15  Score=157.08  Aligned_cols=232  Identities=13%  Similarity=0.150  Sum_probs=163.4

Q ss_pred             HHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCC
Q 037144          121 VMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRK  200 (502)
Q Consensus       121 ~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~  200 (502)
                      ..+..++.||.+.++        ++++|+|.+|..++.++..           +++.|++...+|-|+..++.+.|+   
T Consensus       200 Ae~~aA~~fgAd~ty--------fvvNGTS~~n~av~~a~~~-----------~Gd~VLvdRN~HKSv~~aLilsga---  257 (713)
T PRK15399        200 AEEYIARTFGAEQSY--------IVTNGTSTSNKIVGMYAAP-----------AGSTLLIDRNCHKSLAHLLMMSDV---  257 (713)
T ss_pred             HHHHHHHHhCCCcEE--------EEeCChHHHHHHHHHHhcC-----------CCCEEEeecccHHHHHHHHHHcCC---
Confidence            347789999998864        7888889999887777654           788999999999999999999999   


Q ss_pred             CEEEEecCCCCC---cccCH-----HHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEE-Eeecc
Q 037144          201 NIRAIKTTKSSS---YGLSA-----ESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWV-HVDAA  271 (502)
Q Consensus       201 ~v~~v~~~~~~~---~~~d~-----~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~l-hVDaA  271 (502)
                      ..+.++......   +.+++     +.++++|++.... ++|..+++|.+ |..|.+-++++|+++|   |+.+ |||.|
T Consensus       258 ~PVYl~P~~n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~-~~p~~vvit~p-TYdGi~yd~~~I~~~~---g~~~ilvDEA  332 (713)
T PRK15399        258 VPIWLKPTRNALGILGGIPRREFTRDSIEEKVAATTQA-QWPVHAVITNS-TYDGLLYNTDWIKQTL---DVPSIHFDSA  332 (713)
T ss_pred             eeEEecccccccCCcCCCChhhccHHHHHHHHHhCCCc-CCceEEEEECC-CCCceeeCHHHHHHHh---CCCEEEEecc
Confidence            999987654221   34566     9999999876432 46778888887 6899999999999999   6765 89999


Q ss_pred             cccccccCccchhh--hcCCCCCCee---EEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccC
Q 037144          272 YAGSACICPEFRHF--IDGVECVDSF---SFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVG  346 (502)
Q Consensus       272 ~g~~~~~~~~~~~~--~~~~~~aDsi---~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~  346 (502)
                      ||+.+.+.|.+...  +.+..++|.+   +-|.||.+.+-..++++.++..-. .+.+.  ..|....+           
T Consensus       333 hgah~~F~p~~~~~sam~~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~~vd-~~~~n--~a~~m~~S-----------  398 (713)
T PRK15399        333 WVPYTHFHPIYQGKSGMSGERVPGKVIFETQSTHKMLAAFSQASLIHIKGEYD-EETFN--EAFMMHTS-----------  398 (713)
T ss_pred             chhhhhcCcccCCcChhhCCCCCCeeeeeeeehhccccccchheeeeecCCCC-HHHHH--HHHHHHcC-----------
Confidence            99988777655422  2222357877   999999999888899998876411 11111  11111111           


Q ss_pred             CCcccccCCCCCCchHHHH----HHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCC------eEEecC
Q 037144          347 YKDWQITLCRRFRSLKLWV----VIRNFG-VANLRNFIRSHVGMAKLFERLVTSDKR------FEVAFP  404 (502)
Q Consensus       347 ~~~~~~~~sr~~~al~~~~----~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~~------~~l~~~  404 (502)
                              +.+  ...+.+    +.+.+. ..| ++++++..+++..+++.|.++.+      |+++.+
T Consensus       399 --------TSP--sY~LmASLD~a~~~m~~~~G-~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~  456 (713)
T PRK15399        399 --------TSP--SYPIVASVETAAAMLRGNPG-KRLINRSVERALHFRKEVQRLREESDGWFFDIWQP  456 (713)
T ss_pred             --------CCc--HHHHHHHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHhccccccCceeeecCc
Confidence                    101  111222    222232 233 45778888899999999988766      677643

>PRK13578 ornithine decarboxylase; Provisional

Probab=99.74  E-value=1.7e-15  Score=160.92  Aligned_cols=173  Identities=14%  Similarity=0.100  Sum_probs=133.8

Q ss_pred             HHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHH-HHHcCCCC
Q 037144          121 VMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKA-AQIVGIDR  199 (502)
Q Consensus       121 ~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a-a~~~Glg~  199 (502)
                      ..+..++.||.+.++        ++++|+|.+|..++.++..           +++.|++...+|-|+..+ ..+.|+  
T Consensus       179 Aq~~AA~~fgAd~ty--------FlvNGTS~gn~a~i~a~~~-----------~Gd~VLvdRN~HKSv~hgaLiLsGa--  237 (720)
T PRK13578        179 AQKHAAKVFNADKTY--------FVLNGTSASNKVVTNALLT-----------PGDLVLFDRNNHKSNHHGALIQAGA--  237 (720)
T ss_pred             HHHHHHHHhCCCceE--------EEeCChhHHHHHHHHHhcC-----------CCCEEEeecccHHHHHHHHHHHcCC--
Confidence            447789999998864        8889999999887777654           788999999999999996 889999  


Q ss_pred             CCEEEEecCCCC---CcccCHHH-----HHHHHHHH-Hh--cCCcc-EEEEEecCCccccccCChhHHHHH-HHHhCCEE
Q 037144          200 KNIRAIKTTKSS---SYGLSAES-----VLSQINLD-VE--AELIP-LFLCATVGTTAITAVDPLKPLCDV-AKQFGIWV  266 (502)
Q Consensus       200 ~~v~~v~~~~~~---~~~~d~~~-----Le~~i~~~-~~--~g~~p-~~Vv~t~gtt~~G~idpl~eI~~i-~~~~g~~l  266 (502)
                       ..++++...+.   -+.++++.     ++++|++. .+  +..+| .++++|.+ |..|.+-++++|+++ |+.++ .+
T Consensus       238 -~PVYl~P~~n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~p-TYdG~~ydi~~I~~~~~h~~~-~l  314 (720)
T PRK13578        238 -TPVYLETARNPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLG-TYDGTIYNARQVVDKIGHLCD-YI  314 (720)
T ss_pred             -eEEEeeccccccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECC-CCcceeecHHHHHHHhhccCC-cE
Confidence             99998765422   13456555     89888765 11  22345 56777765 489999999999998 68888 99


Q ss_pred             EeecccccccccCccchhhh--cCCCCCC----eeEEccCCcCCCCCcceEEEeeCc
Q 037144          267 HVDAAYAGSACICPEFRHFI--DGVECVD----SFSFNPHKWLFTTLDCCCLWVKDP  317 (502)
Q Consensus       267 hVDaA~g~~~~~~~~~~~~~--~~~~~aD----si~~~~hK~l~~p~~~g~~~~r~~  317 (502)
                      |||.|||+.+.+.|.++.+.  ..-.++|    .++-|.||.+.+-..++++.+++.
T Consensus       315 lvDEAhgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~alTQaS~LHvk~~  371 (720)
T PRK13578        315 LFDSAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDN  371 (720)
T ss_pred             EEeCcchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhcchhhhhHhhhhcCCc
Confidence            99999999987777543321  1123788    999999999988888888888764

>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions

Probab=99.73  E-value=8.8e-16  Score=155.49  Aligned_cols=320  Identities=15%  Similarity=0.080  Sum_probs=195.0

Q ss_pred             HHHHhhcCCCCccccc-ChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCC
Q 037144           95 EMLSSGFNVVGLDWIS-SPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENI  173 (502)
Q Consensus        95 ~~l~~~~n~~~~~~~~-~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~  173 (502)
                      +.+...+...  .+.. ++...++|++    +++++|.+         .++.+++||.|+..|+.+..-.          
T Consensus         9 ~~v~~~l~s~--~~~~~g~~~~~fE~~----~a~~~g~~---------~~~~~~sgt~Al~~al~~l~~~----------   63 (363)
T PF01041_consen    9 DAVLEVLRSG--WLSTYGPYVEEFEKE----FAEYFGVK---------YAVAVSSGTSALHLALRALGLG----------   63 (363)
T ss_dssp             HHHHHHHHHT--CCSSSSHHHHHHHHH----HHHHHTSS---------EEEEESSHHHHHHHHHHHTTGG----------
T ss_pred             HHHHHHHHhC--CccCCCHHHHHHHHH----HHHHhCCC---------eEEEeCChhHHHHHHHHhcCCC----------
Confidence            3444444333  2333 6778888887    45666644         4789999999999888875322          


Q ss_pred             CCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChh
Q 037144          174 SKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLK  253 (502)
Q Consensus       174 ~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~  253 (502)
                      ++++|+++..+..+...++...|+   .++.++++++ ++.||++.|+++|++.++      +|++++   ..|...+++
T Consensus        64 ~gdeVi~p~~t~~~~~~ai~~~G~---~pv~~Di~~~-~~~id~~~~~~~i~~~t~------ai~~~h---~~G~~~d~~  130 (363)
T PF01041_consen   64 PGDEVIVPAYTFPATASAILWAGA---EPVFVDIDPE-TLNIDPEALEKAITPKTK------AILVVH---LFGNPADMD  130 (363)
T ss_dssp             TTSEEEEESSS-THHHHHHHHTT----EEEEE-BETT-TSSB-HHHHHHHHHTTEE------EEEEE----GGGB---HH
T ss_pred             cCceEecCCCcchHHHHHHHHhcc---EEEEEeccCC-cCCcCHHHHHHHhccCcc------EEEEec---CCCCcccHH
Confidence            688999999999999999999999   9999999964 699999999999998764      566655   788888999


Q ss_pred             HHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcc--CCcCCCCCcceEEEeeCchhhhhhhcCCcccc
Q 037144          254 PLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNP--HKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYL  331 (502)
Q Consensus       254 eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~--hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl  331 (502)
                      +|.++|+++|++++-|+|++.+...-.    ...|- ..|.-++|+  .|.+.+. ..|+++++++............-.
T Consensus       131 ~i~~~~~~~~i~lIeD~a~a~g~~~~g----~~~G~-~gd~~~fSf~~~K~i~~g-eGG~v~~~~~~~~~~~~~~~~~g~  204 (363)
T PF01041_consen  131 AIRAIARKHGIPLIEDAAQAFGARYKG----RPVGS-FGDIAIFSFHPTKIITTG-EGGAVVTNDPELAERARALRNHGR  204 (363)
T ss_dssp             HHHHHHHHTT-EEEEE-TTTTT-EETT----EETTS-SSSEEEEESSTTSSS-SS-S-EEEEESTHHHHHHHHHHTBTTE
T ss_pred             HHHHHHHHcCCcEEEccccccCceeCC----EeccC-CCCceEecCCCCCCCcCC-CCeeEEecHHHHHHHhhhhhccCc
Confidence            999999999999999999987654322    11121 346666665  5887443 457777777754332211100000


Q ss_pred             cCccCCCCCcccccCCCccccc--CCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCC---
Q 037144          332 KNEATDQEPKEQEVGYKDWQIT--LCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRN---  406 (502)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~~~--~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~---  406 (502)
                      ....           ...+..+  .+..++.-.+-+++-....+.+.+.+++..++++++.+.|...+++..+..+.   
T Consensus       205 ~~~~-----------~~~~~~~~~~g~n~rm~~~~AAigl~QL~~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~  273 (363)
T PF01041_consen  205 SRDA-----------FRRYRHELPPGYNFRMSELQAAIGLAQLKRLDEIIARRRENAQRYREALAGIPGIKPPPIPDGAE  273 (363)
T ss_dssp             ETSE-----------CSTTEESSSS--B-B-BHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTE
T ss_pred             Cccc-----------cccccccccCCcccccHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCccccccccccc
Confidence            0000           0000000  11122222233333333347788999999999999999999999987765322   


Q ss_pred             ---eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeee--------ECC-----
Q 037144          407 ---FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAI--------VGG-----  470 (502)
Q Consensus       407 ---~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~--------~~g-----  470 (502)
                         ...+.+++.+...                          ....+|.+.|.++|.-...+..        +..     
T Consensus       274 ~~~~~~f~i~~~~~~~--------------------------~~rd~l~~~L~~~GI~~~~~~~~pl~~~~~~~~~~~~~  327 (363)
T PF01041_consen  274 RSSYYRFPIRLPDEAL--------------------------ADRDELVEALRARGIETRPHYPKPLHRQPVYRSYPYYA  327 (363)
T ss_dssp             EBCESSEEEEETCCGC--------------------------STHHHHHHHHHHTTBEEBCSTSSCGGGSGGGTTGEEEE
T ss_pred             cccccccccccccccc--------------------------chHHHHHHHHHHCCCcccccccCchhhhHHHHhcCccc
Confidence               1133444443210                          0135677888888874322110        000     


Q ss_pred             -----------EEEEEEEecCCCCcHHHHHHHHHHHH
Q 037144          471 -----------IYVLRFAAGNSMTMESHVRAAWTVVQ  496 (502)
Q Consensus       471 -----------~~~lR~~~~~~~t~~~di~~~~~~l~  496 (502)
                                 ...|-+-+ ++..+++|+++++++|+
T Consensus       328 ~~~~P~ae~l~~r~l~LP~-~~~lt~edv~~I~~~ir  363 (363)
T PF01041_consen  328 PGDLPNAERLSQRLLSLPI-HPRLTEEDVDYIAEAIR  363 (363)
T ss_dssp             TSSSHHHHHHHHHEEEEEH-STTSCHHHHHHHHHHHH
T ss_pred             cCCCHHHHHHHhCeEECcC-CCCCCHHHHHHHhhccC
Confidence                       12455553 56677889999999875

The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....

>PRK03244 argD acetylornithine aminotransferase; Provisional

Probab=99.73  E-value=4.8e-15  Score=152.26  Aligned_cols=292  Identities=14%  Similarity=0.124  Sum_probs=178.5

Q ss_pred             HHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCC
Q 037144          119 NIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGID  198 (502)
Q Consensus       119 ~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg  198 (502)
                      .++.+++++++|.+..      ...++++||++|+..++..++..     +    +..+|.+....|.+...+....|..
T Consensus        88 ~~la~~l~~~~~~~~~------~~v~~~~sgsea~~~al~~~~~~-----g----~~~ii~~~~~yhg~~~~~~~~~~~~  152 (398)
T PRK03244         88 IALAERLVELLGAPEG------GRVFFCNSGAEANEAAFKLARLT-----G----RTKIVAAEGGFHGRTMGALALTGQP  152 (398)
T ss_pred             HHHHHHHHHhCCCCCC------CEEEEeCchHHHHHHHHHHHHHH-----C----CCeEEEECCCcCCccHHHHhccCCc
Confidence            4677788888885421      15899999999999999988763     1    2345555444555544444443321


Q ss_pred             C---------CCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHHHHHhCCE
Q 037144          199 R---------KNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDVAKQFGIW  265 (502)
Q Consensus       199 ~---------~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~~~~g~~  265 (502)
                      .         .++..+|.       .|+++|++.+.+      .+.+|++....+++|.+-|    +++|.++|++||++
T Consensus       153 ~~~~~~~~~~~~~~~~~~-------~d~~~l~~~~~~------~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~l  219 (398)
T PRK03244        153 AKRAPFEPLPGGVEHVPY-------GDVDALAAAVDD------DTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGAL  219 (398)
T ss_pred             ccccCCCCCCCCceEeCC-------CCHHHHHHhhcC------CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence            0         02333332       378999988842      2457777888899999977    89999999999999


Q ss_pred             EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCccccc
Q 037144          266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEV  345 (502)
Q Consensus       266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~  345 (502)
                      +++|.+|.++......+.....++ ..|.+++  .|+++.++..|.++.++. . .+.+...   ...            
T Consensus       220 lI~DEv~~g~gr~g~~~~~~~~~~-~pDi~t~--sK~l~~G~~ig~~~~~~~-~-~~~~~~~---~~~------------  279 (398)
T PRK03244        220 LVLDEVQTGIGRTGAWFAHQHDGV-TPDVVTL--AKGLGGGLPIGACLAFGP-A-ADLLTPG---LHG------------  279 (398)
T ss_pred             EEEeccccCCcccchHHhhhhhCC-CCCEEEE--chhhhCCcccEEEEEcHH-H-HhhccCC---CCc------------
Confidence            999999976432211111111223 4677766  599987778899888654 2 2233110   000            


Q ss_pred             CCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec--CCCeeEEEEEeecCcchhhh
Q 037144          346 GYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAF--PRNFSLVCFRVTPSAVMDKL  423 (502)
Q Consensus       346 ~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~--~~~~~~v~f~~~~~~~~~~~  423 (502)
                          .++ .+.+........+++.+..   .+..++..++.++|++.|+++ ++.++.  .....++.+.+.+.      
T Consensus       280 ----~t~-~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~-~~~~~~~v~g~g~~~~i~~~~~------  344 (398)
T PRK03244        280 ----STF-GGNPVACAAALAVLDTIAS---EGLLENAERLGEQLRAGIEAL-GHPLVDHVRGRGLLLGIVLTAP------  344 (398)
T ss_pred             ----CCC-CCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHhc-CCCceeeEeeccEEEEEEEecc------
Confidence                011 1111122233334443433   245677788899999999885 232221  12334555555321      


Q ss_pred             hhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          424 RTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                                             ...++.+++.++|.++ .+.   +..+||++... ..+++||+++++.|+++.++
T Consensus       345 -----------------------~~~~~~~~l~~~Gv~~-~~~---~~~~iR~~p~~-~~t~~~i~~~~~~l~~~l~~  394 (398)
T PRK03244        345 -----------------------VAKAVEAAAREAGFLV-NAV---APDVIRLAPPL-IITDAQVDAFVAALPAILDA  394 (398)
T ss_pred             -----------------------HHHHHHHHHHHCCeEE-eec---CCCEEEEECCC-cCCHHHHHHHHHHHHHHHHh
Confidence                                   1356778888888654 331   23689999753 34577999999999988754

>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes

Probab=99.73  E-value=6.2e-17  Score=145.17  Aligned_cols=166  Identities=23%  Similarity=0.174  Sum_probs=126.8

Q ss_pred             HHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH-HHHHHcCCC
Q 037144          120 IVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ-KAAQIVGID  198 (502)
Q Consensus       120 ~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~-~aa~~~Glg  198 (502)
                      ++.++++++++.+..       .+++++|||+|+..++.+++.           ++..|+++...|.+.. ..+...|+ 
T Consensus         4 ~~~~~l~~~~~~~~~-------~~~~~~~~t~a~~~~~~~~~~-----------~~~~v~~~~~~~~~~~~~~~~~~g~-   64 (170)
T cd01494           4 ELEEKLARLLQPGND-------KAVFVPSGTGANEAALLALLG-----------PGDEVIVDANGHGSRYWVAAELAGA-   64 (170)
T ss_pred             HHHHHHHHHcCCCCC-------cEEEeCCcHHHHHHHHHHhCC-----------CCCEEEEeecccceehhhHHHhcCC-
Confidence            567889999963332       588999999999888877653           3567888888998887 78888999 


Q ss_pred             CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccccccccc
Q 037144          199 RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACI  278 (502)
Q Consensus       199 ~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~  278 (502)
                        +++.++.+..+....+.+.+++..     .+..|.+|+++.+++++|...|+++|+++|+++|+++|+|++|+++...
T Consensus        65 --~~~~v~~~~~~~~~~~~~~~~~~~-----~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~  137 (170)
T cd01494          65 --KPVPVPVDDAGYGGLDVAILEELK-----AKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASP  137 (170)
T ss_pred             --EEEEeccCCCCccchhhhhhhhcc-----ccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEeccccccccc
Confidence              999999875432222322333321     2345778999999999999999999999999999999999999887765


Q ss_pred             CccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEee
Q 037144          279 CPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVK  315 (502)
Q Consensus       279 ~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r  315 (502)
                      .+...   ....++|+++.++|||++. .++|++++|
T Consensus       138 ~~~~~---~~~~~~d~~~~s~~K~~~~-~~~G~l~~~  170 (170)
T cd01494         138 APGVL---IPEGGADVVTFSLHKNLGG-EGGGVVIVK  170 (170)
T ss_pred             ccccc---cccccCCEEEEEcccccCC-CceEEEEeC
Confidence            43211   1123799999999999988 689999875

PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis

>TIGR03539 DapC_actino succinyldiaminopimelate transaminase

Probab=99.73  E-value=3.2e-15  Score=151.21  Aligned_cols=308  Identities=12%  Similarity=0.069  Sum_probs=186.9

Q ss_pred             HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCC-CccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHh
Q 037144           90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLP-KSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKI  168 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~-~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~  168 (502)
                      +..+.+.+.....  ...|....+..++.+++.+|+.+.+|.+ -..     ...++|+|+++++..++.+..-.     
T Consensus        36 ~~~~~~~~~~~~~--~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~-----~~I~it~G~~~~i~~~~~~l~~~-----  103 (357)
T TIGR03539        36 PPLIRAALAAAAD--APGYPQTWGTPELREAIVDWLERRRGVPGLDP-----TAVLPVIGTKELVAWLPTLLGLG-----  103 (357)
T ss_pred             CHHHHHHHHHHHh--hCCCCcccCCHHHHHHHHHHHHHhcCCCCCCc-----CeEEEccChHHHHHHHHHHHcCC-----
Confidence            3444555544332  2345555667889999999999987764 221     26888999998876554433111     


Q ss_pred             CccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144          169 GRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA  248 (502)
Q Consensus       169 ~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~  248 (502)
                           +++.|++++.+|..+...++.+|+   +++.++         |++.++.   +      .+.+|+++.++|+||.
T Consensus       104 -----~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~v~---------~~~~l~~---~------~~~~v~~~~p~NPtG~  157 (357)
T TIGR03539       104 -----PGDTVVIPELAYPTYEVGALLAGA---TPVAAD---------DPTELDP---V------GPDLIWLNSPGNPTGR  157 (357)
T ss_pred             -----CCCEEEECCCCcHHHHHHHHhcCC---EEeccC---------ChhhcCc---c------CccEEEEeCCCCCcCc
Confidence                 678889999999999988899998   776663         1222221   1      2347778889999999


Q ss_pred             cCC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhc-----CCCCCCeeEEccCCcCCCC-CcceEEEeeCchh
Q 037144          249 VDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFID-----GVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSC  319 (502)
Q Consensus       249 idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~-----~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~  319 (502)
                      .-+   +++|.++|+++|+++++|.+|+.....-+ ....+.     +...-..+..+++|.++.| ..+|+++. ++..
T Consensus       158 ~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G~~i~-~~~~  235 (357)
T TIGR03539       158 VLSVDELRAIVAWARERGAVVASDECYLELGWEGR-PVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGFVAG-DPAL  235 (357)
T ss_pred             cCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCC-CccceecccCCCccccEEEEeccccccCCCceeEEEEec-CHHH
Confidence            854   77799999999999999999965432111 101111     0001125566899998544 44566653 4433


Q ss_pred             hhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 037144          320 LLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG-VANLRNFIRSHVGMAKLFERLVTSDKR  398 (502)
Q Consensus       320 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~~  398 (502)
                      ........ .+.. .                      ....+...++...+. ...+....+++.++++++.+.|++. +
T Consensus       236 ~~~~~~~~-~~~~-~----------------------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~-g  290 (357)
T TIGR03539       236 VAELLTVR-KHAG-L----------------------MVPAPVQAAMVAALGDDGHVAEQKARYAARRAQLKPALEKA-G  290 (357)
T ss_pred             HHHHHHHH-hhcc-c----------------------CCCHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHc-C
Confidence            22211111 0000 0                      002222333333332 3445666677778888899999886 6


Q ss_pred             eEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeE--CCEEEEEE
Q 037144          399 FEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIV--GGIYVLRF  476 (502)
Q Consensus       399 ~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~--~g~~~lR~  476 (502)
                      +.+. +|..+++.|...+..                             ...+.+.+.+.|..+.++..+  .+..++|+
T Consensus       291 ~~~~-~p~~~~~~~~~~~~~-----------------------------~~~~~~~l~~~gV~v~pg~~f~~~~~~~iRi  340 (357)
T TIGR03539       291 FRID-HSEAGLYLWATRGED-----------------------------AWDTVDRLAELGILVAPGDFYGPAGSQHVRV  340 (357)
T ss_pred             CCCc-CCCccEEEEEECCCC-----------------------------HHHHHHHHHhCCEEECCccccCCCCCCeEEE
Confidence            7654 566676666543321                             234666676778755443322  23579999


Q ss_pred             EecCCCCcHHHHHHHHHHH
Q 037144          477 AAGNSMTMESHVRAAWTVV  495 (502)
Q Consensus       477 ~~~~~~t~~~di~~~~~~l  495 (502)
                      ++++   ++++++++++.|
T Consensus       341 s~~~---~~~~i~~~~~~l  356 (357)
T TIGR03539       341 ALTA---TDERIAAAVARL  356 (357)
T ss_pred             EecC---CHHHHHHHHHhh
Confidence            9974   467899988765

This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).

>PRK09275 aspartate aminotransferase; Provisional

Probab=99.73  E-value=1.6e-15  Score=157.82  Aligned_cols=371  Identities=11%  Similarity=0.093  Sum_probs=207.3

Q ss_pred             CCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHH-HHhcCC--CCccCcCCCCcEEEcCCchHHHHHHHHHHHH
Q 037144           86 TSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWL-GQMLDL--PKSFLFSGNGGGVIQGTTCEALLCTLTAARD  162 (502)
Q Consensus        86 ~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l-~~l~g~--~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~  162 (502)
                      +..+|..+-++..+...   ..|...++..++.+++++++ .+.++.  +..    +....++|+|+++++..++.+...
T Consensus       111 ~~~~~~~v~e~~~~~~~---~~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~----~~~~I~vT~Ga~~al~~~~~aL~~  183 (527)
T PRK09275        111 GFDADEFVYELVDGIIG---DNYPVPDRMLKHTEKIVKDYLRQEMCGGRPPK----GEFDLFAVEGGTAAMCYIFDSLKE  183 (527)
T ss_pred             CCCCCHHHHHHHHHHhc---CCCCCCCCCHHHHHHHHHHHHHhhccCCCCCC----CcCeEEEeCCHHHHHHHHHHHHhh
Confidence            34556777776555543   24887788888888888755 443332  111    001689999999998877765321


Q ss_pred             H-HHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEec
Q 037144          163 R-VLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATV  241 (502)
Q Consensus       163 ~-~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~  241 (502)
                      . .++       +++.|++..+.+..+...+++.|.|. .++.++.+++++|.+|+++|++++++.++      +|+++.
T Consensus       184 ~~ll~-------pGD~Vlv~~P~y~~Y~~~~~l~g~~~-~~v~v~~~~~~~f~~d~~~l~~~~~~~tk------ai~l~n  249 (527)
T PRK09275        184 NGLLK-------AGDKIALMTPIFTPYLEIPELPRYDL-EVVHINADEENEWQYPDSELEKLRDPSIK------ALFLVN  249 (527)
T ss_pred             hhcCC-------CCCEEEEeCCChHHHHHHHHHcCCCe-EEEEeecCcccCCCCCHHHHHhhcCCCCC------EEEEeC
Confidence            1 111       78889999999999999989887621 44555555444689999999998765443      788889


Q ss_pred             CCccccccCC---hhHHHHHHHH--hCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCC-CCCcceEEEee
Q 037144          242 GTTAITAVDP---LKPLCDVAKQ--FGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLF-TTLDCCCLWVK  315 (502)
Q Consensus       242 gtt~~G~idp---l~eI~~i~~~--~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r  315 (502)
                      ++|+||.+-+   +++|+++|++  +++|+++|.+|+.+..   .+.........--.+..++.|.++ ..+..|+++..
T Consensus       250 P~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~---~~~s~~~~~~~~~I~v~SfSK~f~mtG~RlG~i~~~  326 (527)
T PRK09275        250 PSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVD---DFRSLFAVLPYNTILVYSFSKYFGATGWRLGVIALH  326 (527)
T ss_pred             CcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcc---cccCHHHhCCCCEEEEeehhhhccCcHhHHhhhhcC
Confidence            9999999965   7888888965  4999999999986542   222222111122245567899996 55667887765


Q ss_pred             CchhhhhhhcCCc--------ccccCccCCCCCcccccCCCcccccCCC--------CCCchHHHH-----HHHHh--cH
Q 037144          316 DPSCLLSTLSTNP--------QYLKNEATDQEPKEQEVGYKDWQITLCR--------RFRSLKLWV-----VIRNF--GV  372 (502)
Q Consensus       316 ~~~~l~~~~~~~~--------~yl~~~~~~~~~~~~~~~~~~~~~~~sr--------~~~al~~~~-----~l~~~--g~  372 (502)
                      +...+...+...+        .++..-..+    .....+.+.-..-+|        .......++     ....+  +.
T Consensus       327 ~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~----p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~all~~~~  402 (527)
T PRK09275        327 EDNVFDKLIAKLPEEKKKELDKRYSSLTTD----PEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALLDEED  402 (527)
T ss_pred             chhHHHHHHHhccHHHHHHHHhhhhhccCC----cchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHhCch
Confidence            5422111111000        000000000    000111110000000        011111121     12222  34


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCeEEe-cCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHH
Q 037144          373 ANLRNFIRSHVGMAKLFERLVTSDKRFEVA-FPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNREL  451 (502)
Q Consensus       373 ~g~~~~~~~~~~la~~l~~~l~~~~~~~l~-~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  451 (502)
                      +...+..+.+.++++.+.+.|    ++.+. .+|.....+|.-.+.....      ..+..     ...+-.......++
T Consensus       403 ~~~~~~~~~~~~Rr~~l~~~L----g~~~~~~~p~g~fY~~~di~~~~~~------~~g~~-----f~~~l~~~~~~~~f  467 (527)
T PRK09275        403 AYKKAMKDIIRRRYKALYEGL----GLPEPEDPNNAAYYTLIDLEEWAEK------NYGKE-----FADYLKKNYSPVDL  467 (527)
T ss_pred             HHHHHHHHHHHHHHHHHHHHc----CCCCcCCCCCeeEEEEEEhHHhhhh------ccCch-----hhhhhhccCCHHHH
Confidence            556677777778888887777    23322 2566666665432210000      00000     00000000012355


Q ss_pred             HHHHHhc-CcEEEEeeeEC-CEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          452 LESINVS-GKVFMTHAIVG-GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       452 ~~~l~~~-g~~~~~~~~~~-g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      +.+|.++ |.+++++..++ +..++|+|+++  .+++++..+.+.|++++++
T Consensus       468 ~~~Ll~e~gV~v~PG~~Fg~~~~~vRis~a~--~~~~~~~~~~~rl~~~l~~  517 (527)
T PRK09275        468 LFRLAEETGVVLLPGGGFGGPEWSVRVSLAN--LNEEDYAKIGKAIRKLLDE  517 (527)
T ss_pred             HHHHHhcCCEEEeCchhhCCCCCeEEEEEec--CCHHHHHHHHHHHHHHHHH
Confidence            5566555 55555555554 35689999976  3677999999999888764

>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed

Probab=99.73  E-value=8.9e-15  Score=150.43  Aligned_cols=298  Identities=12%  Similarity=0.064  Sum_probs=174.4

Q ss_pred             HHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCC-
Q 037144          119 NIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGI-  197 (502)
Q Consensus       119 ~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Gl-  197 (502)
                      .++.+.+++++|.+         ..++++|||+|+..|+.++|.......+....+..+|..+...|-+..-+....+- 
T Consensus        86 ~~l~~~l~~~~~~~---------~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~  156 (401)
T PRK00854         86 APLYEELAALTGSH---------KVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDP  156 (401)
T ss_pred             HHHHHHHHhhCCCC---------EEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCc
Confidence            33445566777653         47999999999999999998642211111100124555555567654433321110 


Q ss_pred             --------CCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHHHHHhCCE
Q 037144          198 --------DRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDVAKQFGIW  265 (502)
Q Consensus       198 --------g~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~~~~g~~  265 (502)
                              ....+..+|       ..|+++|+++|.+.      +.+|++..+.+++|.+-|    +++|.++|++||++
T Consensus       157 ~~~~~~~~~~~~~~~~~-------~~d~~~le~~i~~~------~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~  223 (401)
T PRK00854        157 DARGGFGPFTPGFRVVP-------FGDAEALEAAITPN------TVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVT  223 (401)
T ss_pred             cccccCCCCCCCeEEeC-------CCCHHHHHHHhCCC------eEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence                    001233343       24889999988643      348889999999999876    99999999999999


Q ss_pred             EEeecccccccccCcc-chhhhcCCCCCCeeEEccCCcCCCCC-cceEEEeeCchhhhhhhcCCcccccCccCCCCCccc
Q 037144          266 VHVDAAYAGSACICPE-FRHFIDGVECVDSFSFNPHKWLFTTL-DCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQ  343 (502)
Q Consensus       266 lhVDaA~g~~~~~~~~-~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~  343 (502)
                      +++|++|.+... .+. +.....++ ..|.++++  |++...+ ..|+++.++. .+ +.+..    ....         
T Consensus       224 lI~DEv~~g~g~-~g~~~~~~~~g~-~~D~~~~~--K~l~gg~~~ig~v~~~~~-~~-~~l~~----~~~~---------  284 (401)
T PRK00854        224 LILDEIQTGLGR-TGKLLAEEHEGI-EADVTLIG--KALSGGFYPVSAVLSNSE-VL-GVLKP----GQHG---------  284 (401)
T ss_pred             EEEechhhCCCC-CchHhHHhhcCC-CCCEEEec--ccccCCccCeEEEEEcHH-HH-hcccC----CCCC---------
Confidence            999999975322 221 11111223 46877774  9997653 5677766443 22 22211    0000         


Q ss_pred             ccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec--CCCeeEEEEEeecCcchh
Q 037144          344 EVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAF--PRNFSLVCFRVTPSAVMD  421 (502)
Q Consensus       344 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~--~~~~~~v~f~~~~~~~~~  421 (502)
                            .++ ++.+..+....++|+.+..   ..+.++..++++++.+.|+++. +..+.  .+...++.|.+.+..   
T Consensus       285 ------~t~-~~~~~~~aa~~a~L~~l~~---~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~g~g~~~~i~~~~~~---  350 (401)
T PRK00854        285 ------STF-GGNPLACAVARAALKVLTE---EGMIENAAEMGAYFLEGLRSIR-SNIVREVRGRGLMLAVELEPEA---  350 (401)
T ss_pred             ------CCC-CcCHHHHHHHHHHHHHHHH---cCHHHHHHHHHHHHHHHHHhhc-cCceEEEeccceEEEEEEecCc---
Confidence                  001 1111122233333433322   2366788889999999998863 22221  233445555553321   


Q ss_pred             hhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144          422 KLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~  500 (502)
                                              ....++.+.|.++|... .+   .+..++|++.. ...++++|+++++.|+++..
T Consensus       351 ------------------------~~~~~~~~~L~~~GV~v-~~---~~~~~lR~~p~-~~~t~e~i~~~i~~l~~~l~  400 (401)
T PRK00854        351 ------------------------GGARQYCEALKERGLLA-KD---THDHTIRLAPP-LVITREQVDWALEQIAKVLA  400 (401)
T ss_pred             ------------------------hhHHHHHHHHHHCCeEE-ec---CCCCEEEEeCC-cccCHHHHHHHHHHHHHHhh
Confidence                                    11346777777788643 22   23468999974 44677799999999988753

>PRK07671 cystathionine beta-lyase; Provisional

Probab=99.73  E-value=1e-15  Score=155.22  Aligned_cols=219  Identities=16%  Similarity=0.178  Sum_probs=151.4

Q ss_pred             cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144          110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ  189 (502)
Q Consensus       110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~  189 (502)
                      ..|....+|+    .++++.|.+.         .+++++|+.++..++ ....           +++.|+++...|.+..
T Consensus        48 ~~p~~~~Le~----~lA~l~g~~~---------~~~~~sG~aai~~~~-~~l~-----------~Gd~Viv~~~~y~~~~  102 (377)
T PRK07671         48 GNPTRAALEE----LIAVLEGGHA---------GFAFGSGMAAITAVM-MLFS-----------SGDHVILTDDVYGGTY  102 (377)
T ss_pred             CChHHHHHHH----HHHHHhCCCc---------eEEeCCHHHHHHHHH-HHhC-----------CCCEEEECCCccchHH
Confidence            4455555554    4778888653         467777876654332 2211           5778888888776433


Q ss_pred             H----HHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144          190 K----AAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW  265 (502)
Q Consensus       190 ~----aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~  265 (502)
                      .    .+...|+   +++.++.       .|+++++++|+++++      +|+++.++|++|.+.|+++|+++|+++|++
T Consensus       103 ~~~~~~~~~~G~---~v~~v~~-------~d~~~l~~ai~~~tk------lV~le~P~NPtg~~~dl~~I~~la~~~g~~  166 (377)
T PRK07671        103 RVMTKVLNRFGI---EHTFVDT-------SNLEEVEEAIRPNTK------AIYVETPTNPLLKITDIKKISTIAKEKGLL  166 (377)
T ss_pred             HHHHHHHhcCCe---EEEEECC-------CCHHHHHHhcCCCCe------EEEEECCCCCCCcccCHHHHHHHHHHcCCE
Confidence            2    3445687   8888763       388999999976543      888899999999999999999999999999


Q ss_pred             EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCccc
Q 037144          266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQ  343 (502)
Q Consensus       266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~  343 (502)
                      ++||++|+......+ . .     .++|.++.+++|++++|.+  .|+++++++....... ....+.            
T Consensus       167 lvvD~a~~~~~~~~p-~-~-----~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~-~~~~~~------------  226 (377)
T PRK07671        167 TIVDNTFMTPYWQSP-I-S-----LGADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLH-FVQNST------------  226 (377)
T ss_pred             EEEECCCCccccCCh-h-h-----hCCeEEEecCcccccCCccceeEEEEeCcHHHHHHHH-HHHHhh------------
Confidence            999999976443222 1 1     1789999999999998754  5666666654332211 111111            


Q ss_pred             ccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144          344 EVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA  402 (502)
Q Consensus       344 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~  402 (502)
                                 +-...+...|..++  |.+.+..++++..+++..+.+.|++.|++.-+
T Consensus       227 -----------g~~~~~~~a~l~~~--~l~tl~~R~~~~~~na~~la~~L~~~~~v~~v  272 (377)
T PRK07671        227 -----------GGILGPQDSWLLLR--GLKTLGIRMEEHETNSRAIAEFLNNHPAVNKV  272 (377)
T ss_pred             -----------cCCCCHHHHHHHHc--CcChHHHHHHHHHHHHHHHHHHHHcCCCeeEE
Confidence                       11124456666665  44567779999999999999999999988654

>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases

Probab=99.73  E-value=1.7e-17  Score=160.93  Aligned_cols=254  Identities=16%  Similarity=0.128  Sum_probs=164.0

Q ss_pred             hcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEE
Q 037144          100 GFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVY  179 (502)
Q Consensus       100 ~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~  179 (502)
                      ..|.....|...+.+.++|+.    ++++||.+.         .+|+++||+||..++.+...           +...|+
T Consensus        17 ~a~~gd~~Yg~D~~~~~l~~~----i~~l~g~e~---------a~f~~sGT~An~~al~~~~~-----------~~~~vi   72 (290)
T PF01212_consen   17 AANVGDDAYGEDPTTARLEER----IAELFGKEA---------ALFVPSGTMANQLALRAHLR-----------PGESVI   72 (290)
T ss_dssp             HTTSB-CCTTSSHHHHHHHHH----HHHHHTSSE---------EEEESSHHHHHHHHHHHHHH-----------TTEEEE
T ss_pred             ccccCCcccCCChhHHHHHHH----HHHHcCCCE---------EEEeCCCChHHHHHHHHHHh-----------cCCcee
Confidence            344444468888877777755    678888874         57999999999999988874           678889


Q ss_pred             eCCCCchhHHH--H-HHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccc-ccc---CCh
Q 037144          180 SSDQTHCAFQK--A-AQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAI-TAV---DPL  252 (502)
Q Consensus       180 ~s~~~H~s~~~--a-a~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~-G~i---dpl  252 (502)
                      +...+|..+..  + ..+.|.   +++.++.+.  .|.+|+++|++.+.+......+|.+|.++.+++.. |.+   +.|
T Consensus        73 ~~~~aHi~~~E~ga~~~~~G~---~~~~l~~~~--~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el  147 (290)
T PF01212_consen   73 CADTAHIHFDETGAIEELSGA---KLIPLPSDD--DGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEEL  147 (290)
T ss_dssp             EETTEHHHHSSTTHHHHHTTC---EEEEEBECT--GTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHH
T ss_pred             ccccceeeeeccchhhHhcCc---EEEECCCcc--cCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHH
Confidence            99999987654  2 256788   899998763  27999999999998865433457788888777654 554   678


Q ss_pred             hHHHHHHHHhCCEEEeeccccccccc--CccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCccc
Q 037144          253 KPLCDVAKQFGIWVHVDAAYAGSACI--CPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQY  330 (502)
Q Consensus       253 ~eI~~i~~~~g~~lhVDaA~g~~~~~--~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~y  330 (502)
                      ++|.++|++||+.+|+|||.-+....  ....+...   ..+|+++++++|.++.|.  |.+++-++..+...+.. ..+
T Consensus       148 ~ai~~~a~~~gl~lhmDGARl~~a~~~~~~~~~e~~---~~~D~v~~~~tK~~g~~~--Gavl~~~~~~i~~~~~~-~k~  221 (290)
T PF01212_consen  148 RAISELAREHGLPLHMDGARLANAAAALGVSLAEIA---AGADSVSFGGTKNGGAPG--GAVLAGNKEFIAKARRQ-RKR  221 (290)
T ss_dssp             HHHHHHHHHHT-EEEEEETTHHHHHCHHHHHHHHHH---TTSSEEEEETTSTT-SSS--EEEEEESHHHHHHHHHH-HHH
T ss_pred             HHHHHHHHhCceEEEEehhhHHHhhhcccccHHHHh---hhCCEEEEEEEccccccc--ceEEEechHHHHHHHHH-HHH
Confidence            88889999999999999986433221  11123333   489999999999999884  44444445433322211 112


Q ss_pred             ccCccCCCCCcccccCCCcccccCCCCCCchHH---HHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCe
Q 037144          331 LKNEATDQEPKEQEVGYKDWQITLCRRFRSLKL---WVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNF  407 (502)
Q Consensus       331 l~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~---~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~  407 (502)
                      +....                    |..+.+.+   +......+.+....+..+..+++++|.+.|+++ ++.+..++..
T Consensus       222 ~gg~~--------------------~~~G~~~a~~~~~~~~l~~l~~~~~~~~~~~~~A~~La~~l~~~-~~~~~~~~~t  280 (290)
T PF01212_consen  222 LGGGM--------------------RQAGVLAAAELYQFAALRALELWLERARHANAMAKRLAAGLEAL-GGVLPRPVET  280 (290)
T ss_dssp             HTHHH--------------------HHTTHHHHHHHHHHHHHCHEECSHHHHHCHHHHHHCHHHCHHEE-CEEEETTSS-
T ss_pred             hccCe--------------------eecceeeeechhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCC
Confidence            21100                    00011111   111111122333567788899999999999998 5666656554


Q ss_pred             eE
Q 037144          408 SL  409 (502)
Q Consensus       408 ~~  409 (502)
                      +.
T Consensus       281 n~  282 (290)
T PF01212_consen  281 NQ  282 (290)
T ss_dssp             HH
T ss_pred             cE
Confidence            43

It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....

>PRK09257 aromatic amino acid aminotransferase; Provisional

Probab=99.73  E-value=3.3e-15  Score=153.31  Aligned_cols=325  Identities=13%  Similarity=0.079  Sum_probs=199.9

Q ss_pred             HHHHHHHHhhcCC-CCcccccChhhHHHHHHHHHHHHHhcCC--CCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHH
Q 037144           91 GIVGEMLSSGFNV-VGLDWISSPAAVELENIVMDWLGQMLDL--PKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKK  167 (502)
Q Consensus        91 ~~~~~~l~~~~n~-~~~~~~~~p~~~~le~~~~~~l~~l~g~--~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~  167 (502)
                      ..+.+.+...+.. ....|....+..++.+.+.+|+.+..+.  +.+.     -.+++|+|+++|+..++.+....  . 
T Consensus        47 ~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~-----i~v~iT~Ga~~al~~~~~~l~~~--~-  118 (396)
T PRK09257         47 RAVKKAEARLLETETTKNYLPIEGLAAYRQAVQELLFGADSPALAAGR-----VATVQTPGGTGALRVGADFLKRA--F-  118 (396)
T ss_pred             HHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHHhcCCCCcccccCe-----EEEEecCCccHHHHHHHHHHHHh--C-
Confidence            5566666666543 2335777778889999999998765443  2210     02389999999988776543210  0 


Q ss_pred             hCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccc
Q 037144          168 IGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAIT  247 (502)
Q Consensus       168 ~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G  247 (502)
                            +++.|++.++++..+..+++..|+   +++.+|+...+++.+|+++|+++++....   +..+++.+.++|+||
T Consensus       119 ------pGd~Vlv~~P~y~~~~~~~~~~g~---~~v~v~~~~~~~~~~d~~~l~~~~~~~~~---~~~~~i~~~p~NPTG  186 (396)
T PRK09257        119 ------PDAKVWVSDPTWPNHRAIFEAAGL---EVKTYPYYDAATKGLDFDAMLADLSQAPA---GDVVLLHGCCHNPTG  186 (396)
T ss_pred             ------CCCeEEECCCCcccHHHHHHHcCC---cEEEEeccccccCccCHHHHHHHHHhCCC---CCEEEEeCCCCCCCC
Confidence                  678999999999999999999999   99999983222478999999998864211   124667788999999


Q ss_pred             cc---CChhHHHHHHHHhCCEEEeecccccccccCc-cchhh--hcCCCCCCeeEEccCCcCCC-CCcceEEEe--eCch
Q 037144          248 AV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICP-EFRHF--IDGVECVDSFSFNPHKWLFT-TLDCCCLWV--KDPS  318 (502)
Q Consensus       248 ~i---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~-~~~~~--~~~~~~aDsi~~~~hK~l~~-p~~~g~~~~--r~~~  318 (502)
                      .+   +.+++|+++|++||+|+++|.+|........ .....  +.+...--.++.++.|.++. ...+|++++  .++.
T Consensus       187 ~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRiG~~~~~~~~~~  266 (396)
T PRK09257        187 ADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFGLYGERVGALSVVAEDAE  266 (396)
T ss_pred             CCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCccccccceeEEEEeCCHH
Confidence            98   4577888999999999999999977543111 11111  11111111455779999986 688898874  3333


Q ss_pred             hhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--c------HHHHHHHHHHHHHHHHHHH
Q 037144          319 CLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--G------VANLRNFIRSHVGMAKLFE  390 (502)
Q Consensus       319 ~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g------~~g~~~~~~~~~~la~~l~  390 (502)
                      .+...............                 .+   ...+....+.+.+  +      .+.+++..+++.++++.+.
T Consensus       267 ~~~~~~~~~~~~~~~~~-----------------~~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l~  326 (396)
T PRK09257        267 EADRVLSQLKATIRTNY-----------------SN---PPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQLLV  326 (396)
T ss_pred             HHHHHHHHHHHHhhhhc-----------------CC---CcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            21111110000000000                 00   0111222222222  1      2335566777888889999


Q ss_pred             HHHhcCC---CeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHH-HhcCcEEEEee
Q 037144          391 RLVTSDK---RFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESI-NVSGKVFMTHA  466 (502)
Q Consensus       391 ~~l~~~~---~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~g~~~~~~~  466 (502)
                      +.|++..   ++.+. .|+.++++|.-.+                            .    ++.+++ .+.|. ++.+ 
T Consensus       327 ~~L~~~~~~~~~~~~-~p~gg~~~w~~l~----------------------------~----~~~~~l~~~~~V-~~~p-  371 (396)
T PRK09257        327 EALKAKGPSRDFDFI-ARQRGMFSYSGLT----------------------------P----EQVDRLREEFGV-YAVG-  371 (396)
T ss_pred             HHHHhcCCCCCcccc-cccceEEEecCCC----------------------------H----HHHHHHHHcCCE-EEcC-
Confidence            9998862   35544 4556666553221                            1    222333 34455 3333 


Q ss_pred             eECCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144          467 IVGGIYVLRFAAGNSMTMESHVRAAWTVVQEH  498 (502)
Q Consensus       467 ~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~  498 (502)
                        .+    |+++++  .++++|+++++.|+++
T Consensus       372 --~~----ri~~~~--~~~~~i~~~~~~i~~~  395 (396)
T PRK09257        372 --SG----RINVAG--LNESNIDYVAEAIAAV  395 (396)
T ss_pred             --CC----eEEEee--CCHHHHHHHHHHHHhh
Confidence              12    999865  4667999999999865

>PRK05939 hypothetical protein; Provisional

Probab=99.73  E-value=1.5e-15  Score=154.76  Aligned_cols=239  Identities=11%  Similarity=0.059  Sum_probs=154.1

Q ss_pred             cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCch---
Q 037144          110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHC---  186 (502)
Q Consensus       110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~---  186 (502)
                      ..|....+|++    ++++.|...         .+++++|+.|+..++.+...           +++.|+++...|.   
T Consensus        45 g~p~~~~lE~~----la~leg~~~---------~v~~ssG~~Ai~~~l~all~-----------~Gd~Vv~~~~~y~~t~  100 (397)
T PRK05939         45 GTPTTAALEAK----ITKMEGGVG---------TVCFATGMAAIAAVFLTLLR-----------AGDHLVSSQFLFGNTN  100 (397)
T ss_pred             CCHHHHHHHHH----HHHHhCCCe---------EEEeCCHHHHHHHHHHHHcC-----------CCCEEEECCCccccHH
Confidence            56777777766    567777653         46677778888766655432           6778888877654   


Q ss_pred             hHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEE
Q 037144          187 AFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWV  266 (502)
Q Consensus       187 s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~l  266 (502)
                      ++...+...|+   +++.++.       .|+++|++++++++      .+|+++.++|++|.+.|+++|+++|+++|+++
T Consensus       101 ~~~~~l~~~G~---~v~~v~~-------~d~e~l~~~l~~~t------klV~vesp~NptG~v~dl~~I~~la~~~gi~l  164 (397)
T PRK05939        101 SLFGTLRGLGV---EVTMVDA-------TDVQNVAAAIRPNT------RMVFVETIANPGTQVADLAGIGALCRERGLLY  164 (397)
T ss_pred             HHHHHHHhcCC---EEEEECC-------CCHHHHHHhCCCCC------eEEEEECCCCCCCCHHhHHHHHHHHHHcCCEE
Confidence            44456677888   8888875       27899999986544      37888999999999999999999999999999


Q ss_pred             EeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc-ceEEEeeCchh-hhhhhcCCcccccCccCCCCCcccc
Q 037144          267 HVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD-CCCLWVKDPSC-LLSTLSTNPQYLKNEATDQEPKEQE  344 (502)
Q Consensus       267 hVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~-~g~~~~r~~~~-l~~~~~~~~~yl~~~~~~~~~~~~~  344 (502)
                      +||++|+.+...-+.  .     -++|.+..++||+++++.. .|++++.+... ..........|.......    ...
T Consensus       165 ivD~t~a~~~~~~~~--~-----~gaDivv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~----~~~  233 (397)
T PRK05939        165 VVDNTMTSPWLFRPK--D-----VGASLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQ----WGL  233 (397)
T ss_pred             EEECCcccccccCcc--c-----cCCEEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhh----HHH
Confidence            999999765432111  1     1799999999999987533 24444422210 000000000010000000    000


Q ss_pred             cCCCc-ccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 037144          345 VGYKD-WQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEV  401 (502)
Q Consensus       345 ~~~~~-~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l  401 (502)
                      ..... .....+-...+...|..++  |.+-+..+++++.+++..+.+.|++.|.++-
T Consensus       234 ~~~~~~~~~~~G~~~~p~~a~l~~r--gl~tl~~R~~~~~~na~~la~~L~~~p~V~~  289 (397)
T PRK05939        234 TQIRKKGLRDMGATLSSEAAHRIAI--GAETLALRVDRSCSNALALAQFLEAHPKVAR  289 (397)
T ss_pred             HHHHHHHHHhcCCCCCHHHHHHHHc--CcCcHHHHHHHHHHHHHHHHHHHHhCCCccE
Confidence            00000 0001122234456665554  6788899999999999999999999998753

>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional

Probab=99.73  E-value=1.9e-15  Score=153.76  Aligned_cols=233  Identities=12%  Similarity=0.100  Sum_probs=148.6

Q ss_pred             HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcC
Q 037144          117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVG  196 (502)
Q Consensus       117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~G  196 (502)
                      +.+++.+++++.+|.+         ..++++|||.|+..++.+..-.          +++.|+++..+|.+...++...|
T Consensus        32 ~~~~~e~~la~~~g~~---------~~v~~~sgt~al~~~l~~~~~~----------~Gd~Viv~~~t~~~~~~~~~~~G   92 (375)
T PRK11706         32 FTRRCQQWLEQRFGSA---------KVLLTPSCTAALEMAALLLDIQ----------PGDEVIMPSYTFVSTANAFVLRG   92 (375)
T ss_pred             HHHHHHHHHHHHhCCC---------eEEEECCHHHHHHHHHHHhCCC----------CCCEEEECCCCcHHHHHHHHHcC
Confidence            3445556678888874         3789999999986665543111          67889999999999999999999


Q ss_pred             CCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccccccc
Q 037144          197 IDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSA  276 (502)
Q Consensus       197 lg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~  276 (502)
                      +   +++.++++++ ++.+|+++|++++++.+      .+|++++   .+|...++++|.++|+++|+++++|+||+.+.
T Consensus        93 ~---~~v~~d~d~~-~~~~d~~~le~~i~~~t------k~i~~~~---~~G~~~~~~~i~~la~~~~i~vIeD~a~a~g~  159 (375)
T PRK11706         93 A---KIVFVDIRPD-TMNIDETLIEAAITPKT------RAIVPVH---YAGVACEMDTIMALAKKHNLFVVEDAAQGVMS  159 (375)
T ss_pred             C---EEEEEecCCC-cCCcCHHHHHHhcCCCC------eEEEEeC---CCCCccCHHHHHHHHHHcCCEEEEECcccccc
Confidence            9   9999999864 47899999999986543      2555543   58999999999999999999999999997665


Q ss_pred             ccCccchhhhcCCCCCCeeEEccC--CcCCCCCcceEEEeeCchhhhhh--hcC---CcccccCccCCCCCcccccCCCc
Q 037144          277 CICPEFRHFIDGVECVDSFSFNPH--KWLFTTLDCCCLWVKDPSCLLST--LST---NPQYLKNEATDQEPKEQEVGYKD  349 (502)
Q Consensus       277 ~~~~~~~~~~~~~~~aDsi~~~~h--K~l~~p~~~g~~~~r~~~~l~~~--~~~---~~~yl~~~~~~~~~~~~~~~~~~  349 (502)
                      ....  +. ...  ..|.-++++|  |.+.++ ..|++++.++......  +..   ........         ......
T Consensus       160 ~~~~--~~-~g~--~~~~~~~Sf~~~K~l~~g-~gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~---------~~~~~~  224 (375)
T PRK11706        160 TYKG--RA-LGT--IGHIGCFSFHETKNYTAG-EGGALLINDPALIERAEIIREKGTNRSQFFRG---------QVDKYT  224 (375)
T ss_pred             ccCC--ee-eec--CcCEEEEeCCCCcccccc-CCeEEEECCHHHHHHHHHHHHcCCCcchhhcc---------CCCcce
Confidence            3211  11 111  2465566666  988653 3455666655433211  110   00000000         000000


Q ss_pred             ccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 037144          350 WQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK  397 (502)
Q Consensus       350 ~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~  397 (502)
                      + ...+..+..-.+-+++-....+.+++..++..++++++.+.|..++
T Consensus       225 ~-~~~g~~~~~~~~~aa~~~~ql~~l~~~~~~R~~~~~~~~~~L~~~~  271 (375)
T PRK11706        225 W-VDIGSSYLPSELQAAYLWAQLEAADRINQRRLALWQRYYDALAPLA  271 (375)
T ss_pred             e-eecccccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            0 0111122211222233222235578888888999999999998876

>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated

Probab=99.72  E-value=1.8e-15  Score=153.59  Aligned_cols=219  Identities=16%  Similarity=0.193  Sum_probs=150.8

Q ss_pred             cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhH-
Q 037144          110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAF-  188 (502)
Q Consensus       110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~-  188 (502)
                      ..|....+|+.    ++++.|.+.         .+++++|+.|+..++ .+..           +++.|+++...|.+. 
T Consensus        48 ~~p~~~~Le~~----la~l~g~~~---------al~~~SG~~Al~~~l-~~l~-----------pGd~Vi~~~~~y~~t~  102 (380)
T PRK06176         48 GNPTRFALEEL----IADLEGGVK---------GFAFASGLAGIHAVF-SLFQ-----------SGDHVLLGDDVYGGTF  102 (380)
T ss_pred             CChhHHHHHHH----HHHHhCCCC---------EEEECCHHHHHHHHH-HHcC-----------CCCEEEEcCCChhHHH
Confidence            45556666655    778887653         477788887775333 3321           677888888777543 


Q ss_pred             ---HHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144          189 ---QKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW  265 (502)
Q Consensus       189 ---~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~  265 (502)
                         ...+...|+   +++.++.       .|++++++++++++      .+|++..+++++|.+.|+++|+++|+++|++
T Consensus       103 ~~~~~~~~~~gi---~v~~vd~-------~d~e~l~~ai~~~t------~lV~lesP~Nptg~~~di~~I~~la~~~gi~  166 (380)
T PRK06176        103 RLFDKVLVKNGL---SCTIIDT-------SDLSQIKKAIKPNT------KALYLETPSNPLLKITDLAQCASVAKDHGLL  166 (380)
T ss_pred             HHHHHHHHhcCe---EEEEcCC-------CCHHHHHHhcCcCc------eEEEEECCCCCCceecCHHHHHHHHHHcCCE
Confidence               344566787   7777764       38999999887644      3788899999999999999999999999999


Q ss_pred             EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCccc
Q 037144          266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQ  343 (502)
Q Consensus       266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~  343 (502)
                      ++||++|+......| ..      .++|.++.++||++++|..  .|++..+++.... .+.    .+...         
T Consensus       167 vivD~t~a~~~~~~p-~~------~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~-~~~----~~~~~---------  225 (380)
T PRK06176        167 TIVDNTFATPYYQNP-LL------LGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQ-EIA----FFQNA---------  225 (380)
T ss_pred             EEEECCccccccCCc-cc------cCCCEEEecCceeccCCccceeeEEEecHHHHHH-HHH----HHHHH---------
Confidence            999999976543222 11      2799999999999988754  5556655544322 111    11000         


Q ss_pred             ccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144          344 EVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA  402 (502)
Q Consensus       344 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~  402 (502)
                                .+....+...|..++  |.+.+..++++..+++..+.+.|++.|.++-+
T Consensus       226 ----------~G~~~~~~~~~l~~~--gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v  272 (380)
T PRK06176        226 ----------IGGVLGPQDSWLLQR--GIKTLGLRMEAHQKNALCVAEFLEKHPKVEKV  272 (380)
T ss_pred             ----------hcCCCCHHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEE
Confidence                      011112344565554  55777888999999999999999999888654

>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]

Probab=99.72  E-value=1.9e-15  Score=145.52  Aligned_cols=323  Identities=14%  Similarity=0.109  Sum_probs=222.1

Q ss_pred             ccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhH
Q 037144          109 ISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAF  188 (502)
Q Consensus       109 ~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~  188 (502)
                      ....+...+.+++++.|.+.-|-+..+.   ....++++|+|.+|-+-+.+..+           |++..+++.+.+..+
T Consensus       118 qdy~Gl~~frqa~A~Fm~~~r~~~v~fd---P~~~Vv~~G~T~ane~l~fcLad-----------pgdafLvPtPyY~gf  183 (471)
T KOG0256|consen  118 QDYHGLPSFRQAVAEFMERARGNRVKFD---PERVVVTNGATSANETLMFCLAD-----------PGDAFLVPTPYYPGF  183 (471)
T ss_pred             ccccCchHHHHHHHHHHHHHhCCCCccC---ccceEEecccchhhHHHHHHhcC-----------CCceeeecCCCCCcc
Confidence            3445677889999999999888654431   12588999999988655444444           788899998888888


Q ss_pred             HHHHH-HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hhHHHHHHHHhCC
Q 037144          189 QKAAQ-IVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LKPLCDVAKQFGI  264 (502)
Q Consensus       189 ~~aa~-~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~eI~~i~~~~g~  264 (502)
                      .+-++ ..|+   +++.|.+....++++++++||+++.+..+.|.+..-|+++.|+|+.|.+-+   |..+.++|.++++
T Consensus       184 drdl~~rTgv---eivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kni  260 (471)
T KOG0256|consen  184 DRDLRWRTGV---EIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNI  260 (471)
T ss_pred             cccceeccCc---eEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcce
Confidence            87665 4588   999999987777999999999999999999999899999999999999854   6666777889999


Q ss_pred             EEEeecccccccccCccchhhhc---CCC-CCC--eeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCccc-ccCccC
Q 037144          265 WVHVDAAYAGSACICPEFRHFID---GVE-CVD--SFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQY-LKNEAT  336 (502)
Q Consensus       265 ~lhVDaA~g~~~~~~~~~~~~~~---~~~-~aD--si~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~y-l~~~~~  336 (502)
                      .+++|..|++..+..+++...+.   ..+ ..|  -|..+.+|=++.| ...|+++..+..... +.+....| +-    
T Consensus       261 HvI~DEIya~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~Vvs-aA~kmssf~~v----  335 (471)
T KOG0256|consen  261 HVISDEIYAGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVS-AATKMSSFGLV----  335 (471)
T ss_pred             EEEeehhhcccccCccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecChHHHH-HHHHHhhccCC----
Confidence            99999999998876655543322   111 233  4577899999877 456778777665543 22221111 11    


Q ss_pred             CCCCcccccCCCcccccCCCCCCchHHHHHHHHh-----cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEE
Q 037144          337 DQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF-----GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVC  411 (502)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-----g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~  411 (502)
                                            .+.-.+.....+     -++-+++...|....-+++.++|+++ |+.++ +...+++|
T Consensus       336 ----------------------Ss~tQ~~la~LLSD~~f~~~yl~en~~Rl~~rh~~~~~gLk~l-gI~cl-~s~AGlF~  391 (471)
T KOG0256|consen  336 ----------------------SSQTQYLLASLLSDEEFTREYLRENNKRLRIRHRYIVEGLKAL-GIPCL-KSNAGLFC  391 (471)
T ss_pred             ----------------------cHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhHHhc-CCcee-ecCCeeEE
Confidence                                  112222222222     23445666677777788899999998 88887 56678888


Q ss_pred             EEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeE---CCEEEEEEEecCCCCcHHHH
Q 037144          412 FRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIV---GGIYVLRFAAGNSMTMESHV  488 (502)
Q Consensus       412 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~---~g~~~lR~~~~~~~t~~~di  488 (502)
                      |.-...-++              ..+  .+.     -.+|.+++...-++.++++..   ...+|+|+|+.|  ..++.+
T Consensus       392 wvDlr~lL~--------------s~t--fe~-----El~Lw~~i~~~vklnlSpG~s~~C~EpGWFRvcFAn--~~~~t~  448 (471)
T KOG0256|consen  392 WVDLRKLLT--------------SLT--FEG-----ELELWERILDNVKLNLSPGSSCHCHEPGWFRVCFAN--MSEETL  448 (471)
T ss_pred             EEEhHHhcC--------------cCC--hHH-----HHHHHHHHHHhhccccCCCCcceecCCCeEEEEecc--CCHHHH
Confidence            864322110              000  111     124556666554455666542   457899999976  466677


Q ss_pred             HHHHHHHHHHHH
Q 037144          489 RAAWTVVQEHLE  500 (502)
Q Consensus       489 ~~~~~~l~~~~~  500 (502)
                      +-+++.|+..+.
T Consensus       449 ~~am~Ri~~~~~  460 (471)
T KOG0256|consen  449 EVAMRRLKQFLD  460 (471)
T ss_pred             HHHHHHHHHHHH
Confidence            778888887654

>PRK14809 histidinol-phosphate aminotransferase; Provisional

Probab=99.72  E-value=7.8e-15  Score=148.46  Aligned_cols=303  Identities=15%  Similarity=0.090  Sum_probs=188.6

Q ss_pred             HHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccC
Q 037144           93 VGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGREN  172 (502)
Q Consensus        93 ~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~  172 (502)
                      +.+.+.+.+.. ...|. .++...+.+.    +++.++++.+       ..++|+|+++++..++.+..+          
T Consensus        48 ~~~~~~~~~~~-~~~Y~-~~~~~~lr~~----ia~~~~~~~~-------~I~it~G~~~al~~~~~~~~~----------  104 (357)
T PRK14809         48 AVEAIREAAER-VHSYP-KASHADLTAA----LADRWDVSPE-------QVWLANGGDGALDYLARAMLD----------  104 (357)
T ss_pred             HHHHHHHHHhh-hhcCC-CCCHHHHHHH----HHHHhCCCcc-------eEEECCCHHHHHHHHHHHhcC----------
Confidence            33444443321 23343 2344455555    4555577654       688999999988666555433          


Q ss_pred             CCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCCh
Q 037144          173 ISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPL  252 (502)
Q Consensus       173 ~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl  252 (502)
                       +++.|++..+++..+...++..|.   .++.+|++.++++.+|.+++++.+. .      +.+|+++.++|+||.+-+.
T Consensus       105 -~gd~V~v~~P~y~~~~~~~~~~g~---~~~~~~l~~~~~~~~~~~~~~~~~~-~------~k~i~l~~p~NPTG~~~s~  173 (357)
T PRK14809        105 -PGDTVLVPDPGFAYYGMSARYHHG---EVREYPVSKADDFEQTADTVLDAYD-G------ERIVYLTSPHNPTGSEIPL  173 (357)
T ss_pred             -CCCEEEEeCCChHHHHHHHHHcCC---eEEEEecccCcCCCcCHHHHHHhhc-C------CcEEEEeCCCCCCCcCCCH
Confidence             677888888888777778888999   8999998754457788888777642 1      2367778999999999888


Q ss_pred             hHHHHHHHHh--CCEEEeecccccccccCccchhhhcCCCCC-C-eeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCC
Q 037144          253 KPLCDVAKQF--GIWVHVDAAYAGSACICPEFRHFIDGVECV-D-SFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTN  327 (502)
Q Consensus       253 ~eI~~i~~~~--g~~lhVDaA~g~~~~~~~~~~~~~~~~~~a-D-si~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~  327 (502)
                      +++.++++..  ++++++|.+|+..... +.....+   +.. . .+..++.|.++ ....+|+++..+ ..+.......
T Consensus       174 ~~~~~l~~~~~~~~~iI~De~y~~~~~~-~~~~~~~---~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~-~~~~~~~~~~  248 (357)
T PRK14809        174 DEVEALAERTDEETLVVVDEAYGEFAER-PSAVALV---EERDDVAVLRTFSKAYGLAGLRLGYAVVPE-EWADAYARVN  248 (357)
T ss_pred             HHHHHHHHhCccCcEEEEechhhhccCC-chhHHHH---hhCCCEEEEecchhHhcCcchhheeeecCH-HHHHHHHHhC
Confidence            8887777654  7899999999765421 1111111   122 2 34457999997 556788887643 3322221111


Q ss_pred             cccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCC
Q 037144          328 PQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG-VANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRN  406 (502)
Q Consensus       328 ~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~  406 (502)
                      ..+                          ....+..++++..+. .+.+++..+...+..+++.+.|... .   + ++.
T Consensus       249 ~~~--------------------------~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-~---~-~~~  297 (357)
T PRK14809        249 TPF--------------------------AASELACRAGLAALDDDEHVERTVETARWAREYIREELDAP-T---W-ESA  297 (357)
T ss_pred             CCC--------------------------CCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhcCc-c---C-CCC
Confidence            000                          012333444555443 3446666667777777777777543 1   2 445


Q ss_pred             eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHH
Q 037144          407 FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMES  486 (502)
Q Consensus       407 ~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~  486 (502)
                      .+.+++++. .                              ..++.+.+.+.|..+..+..+....++|++++    +.+
T Consensus       298 g~f~~~~~~-~------------------------------~~~~~~~l~~~gv~v~~g~~f~~~~~iRls~~----~~~  342 (357)
T PRK14809        298 GNFVLAEVG-D------------------------------ASAVAEAAQERGVIVRDCTSFGLPECIRITCG----TRE  342 (357)
T ss_pred             CCEEEEECC-C------------------------------HHHHHHHHHHCCEEEEECccCCCCCeEEEecC----CHH
Confidence            555555442 1                              13456666667875555544444568999975    356


Q ss_pred             HHHHHHHHHHHHHH
Q 037144          487 HVRAAWTVVQEHLE  500 (502)
Q Consensus       487 di~~~~~~l~~~~~  500 (502)
                      ++++++++|+++.+
T Consensus       343 ~~~~~l~~L~~~l~  356 (357)
T PRK14809        343 ETERAVEVLNEVLA  356 (357)
T ss_pred             HHHHHHHHHHHHhc
Confidence            99999999988764

>PRK06460 hypothetical protein; Provisional

Probab=99.72  E-value=1.9e-15  Score=153.40  Aligned_cols=220  Identities=15%  Similarity=0.104  Sum_probs=144.3

Q ss_pred             ccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCc---
Q 037144          109 ISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTH---  185 (502)
Q Consensus       109 ~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H---  185 (502)
                      ...|...++|+.    +++++|.+.         .+++++|++++..++.+...           +++.|+++...+   
T Consensus        42 ~~~p~~~~L~~~----lA~l~g~~~---------~v~~~sG~~ai~~~l~al~~-----------~Gd~Vl~~~~~~~~t   97 (376)
T PRK06460         42 EANPTVLELTKK----IVELENAEM---------GVAFSSGMGAISTTALALLK-----------PGNSVLVHRDMFGRS   97 (376)
T ss_pred             CCCccHHHHHHH----HHHHhCCCc---------EEEeCCHHHHHHHHHHHHhC-----------CCCEEEEecCCcCcH
Confidence            345555666554    778888753         35557777777665554422           566777765433   


Q ss_pred             -hhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCC
Q 037144          186 -CAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGI  264 (502)
Q Consensus       186 -~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~  264 (502)
                       ..+...++..|+   +++.++.+.       .+.+++.+++      ++.+|+++.++|++|.+-|+++|+++|+++|+
T Consensus        98 y~~~~~~~~~~G~---~v~~~~~~~-------~~~l~~~~~~------~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~  161 (376)
T PRK06460         98 YRFFTDYLKNWGV---NVDASNPGS-------DNIIEKAKSK------RYDVVFVENITNPLLRVVDITELSKVCKENGS  161 (376)
T ss_pred             HHHHHHHHHhhCc---EEEEECCCC-------HHHHHHhcCC------CceEEEEECCCCCCCcccCHHHHHHHHHHcCC
Confidence             345567788898   888887642       2334443322      23488899999999999999999999999999


Q ss_pred             EEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCcc
Q 037144          265 WVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKE  342 (502)
Q Consensus       265 ~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~  342 (502)
                      +++||++|+.+....+ ..      .++|.++.++||+++++.+  .|++ +.++........... ....         
T Consensus       162 ~vivDea~~~~~~~~~-l~------~~~divv~S~sK~l~G~~~~~~G~~-~~~~~l~~~l~~~~~-~~g~---------  223 (376)
T PRK06460        162 ILIVDATFSTPINQKP-LE------LGADIVVHSASKFLAGHNDVIAGLA-AGYGKLLNVIDQMRR-TLGT---------  223 (376)
T ss_pred             EEEEECCcCccccCCh-hh------cCCCEEEeecceeccCCCCceEEEE-ecCHHHHHHHHHHHH-hcCC---------
Confidence            9999999975422111 11      1589999999999875432  4544 444443322111110 1100         


Q ss_pred             cccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144          343 QEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA  402 (502)
Q Consensus       343 ~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~  402 (502)
                                    ...+...|.+++  |.+.+..++++..++++++.+.|++.|.++-+
T Consensus       224 --------------~~~~~~a~~~l~--~~~~l~~r~~~~~~n~~~l~~~L~~~p~v~~v  267 (376)
T PRK06460        224 --------------SLDPHAAYLTLR--GIKTLKIRMDVINRNAEQIAEFLEGHPKVVKV  267 (376)
T ss_pred             --------------CCCHHHHHHHHh--chhhHHHHHHHHHHHHHHHHHHHHcCCCccEE
Confidence                          012344555555  56888999999999999999999999887543

>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase

Probab=99.72  E-value=2.4e-15  Score=152.48  Aligned_cols=237  Identities=11%  Similarity=0.083  Sum_probs=146.2

Q ss_pred             HHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCC
Q 037144          120 IVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDR  199 (502)
Q Consensus       120 ~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~  199 (502)
                      ++.+++++.+|.+         ..++|+|||+|+..++.+..-.          +++.|+++..+|.+...++...|+  
T Consensus        35 ~~e~~la~~~g~~---------~~v~~~sgt~aL~~~l~al~~~----------pGd~Viv~~~t~~~~~~~~~~~G~--   93 (376)
T TIGR02379        35 RCETWLENRTGTK---------KALLTPSCTAALEMAALLLDIQ----------PGDEVIMPSYTFVSTANAFVLRGA--   93 (376)
T ss_pred             HHHHHHHHHhCCC---------eEEEeCCHHHHHHHHHHHcCCC----------CcCEEEECCCCcHHHHHHHHHcCC--
Confidence            3445577777764         4789999999987666543111          678899999999999999999999  


Q ss_pred             CCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccC
Q 037144          200 KNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIC  279 (502)
Q Consensus       200 ~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~  279 (502)
                       +++.++++++ ++.+|+++|+++++++++      +|+.   ++++|...|+++|.++|++||+++++|+||+.+....
T Consensus        94 -~~v~vd~d~~-~~~~d~~~le~~i~~~tk------~Iip---~~~~G~~~d~~~I~~la~~~~i~vIeDaa~~~g~~~~  162 (376)
T TIGR02379        94 -KIVFVDIRPD-TMNIDETLIESAITHRTK------AIVP---VHYAGVACDMDTIMALANKHQLFVIEDAAQGVMSTYK  162 (376)
T ss_pred             -EEEEEecCCC-cCCCCHHHHHHhcCcCce------EEEE---eCCCCCccCHHHHHHHHHHCCCEEEEECccccCCccC
Confidence             9999999864 478999999999876433      5554   4468999999999999999999999999997654321


Q ss_pred             ccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCccc-ccCCCCC
Q 037144          280 PEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQ-ITLCRRF  358 (502)
Q Consensus       280 ~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~-~~~sr~~  358 (502)
                      ...   ...+..+.++++.+.|.+......|++++.+++......... .+=......   .....  ..+. ...+.++
T Consensus       163 ~~~---~g~~~~~~~fSf~~~K~l~~g~~gG~v~~~~~~~~~~~~~~~-~~g~~~~~~---~~~~~--~~~~~~~~g~n~  233 (376)
T TIGR02379       163 GRA---LGSIGHLGTFSFHETKNYTSGGEGGALLINDQAFIERAEIIR-EKGTNRSQF---FRGEV--DKYTWRDIGSSY  233 (376)
T ss_pred             Ccc---cCCCCCEEEEeCCCCCcCcccCCceEEEECCHHHHHHHHHHH-HhCCCCccc---cccCC--CcceeeeecccC
Confidence            111   111112334444444556443356777777665433221100 000000000   00000  0000 0112222


Q ss_pred             CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 037144          359 RSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK  397 (502)
Q Consensus       359 ~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~  397 (502)
                      +.-.+-+++-.-..+.+.++.++..+++++..+.|..++
T Consensus       234 ~~~~~~Aa~g~~qL~~l~~~~~~r~~~~~~y~~~L~~~~  272 (376)
T TIGR02379       234 LPSELQAAYLWAQLEQADRINQDRLATWQLYQDALKPLE  272 (376)
T ss_pred             CccHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhccCC
Confidence            221222222222346678888888999999999987764

This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).

>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]

Probab=99.72  E-value=1.3e-14  Score=150.73  Aligned_cols=332  Identities=14%  Similarity=0.079  Sum_probs=217.9

Q ss_pred             HHHHHHHHhhcC---CC-CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHH
Q 037144           91 GIVGEMLSSGFN---VV-GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLK  166 (502)
Q Consensus        91 ~~~~~~l~~~~n---~~-~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~  166 (502)
                      ..+.+.+...+.   .. ...|....+..++.+.+.+++....|.....     ...++|+|+.+|+...+.+..+    
T Consensus       107 ~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~-----~~IiiT~G~q~al~l~~~~l~~----  177 (459)
T COG1167         107 EALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEP-----EQIVITSGAQQALDLLLRLLLD----  177 (459)
T ss_pred             HHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCc-----CeEEEeCCHHHHHHHHHHHhCC----
Confidence            344555544442   22 3456666788999999999999888875432     2689999988887655544433    


Q ss_pred             HhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccc
Q 037144          167 KIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAI  246 (502)
Q Consensus       167 ~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~  246 (502)
                             +++.|++.+++|+....+.+.+|+   +++.||+|++   .||+++||++++...    .-++.+.....|+|
T Consensus       178 -------pGd~v~vE~PtY~~~~~~~~~~g~---~~~~vp~d~~---G~~~e~le~~~~~~~----~k~~y~~P~~qNPt  240 (459)
T COG1167         178 -------PGDTVLVEDPTYPGALQALEALGA---RVIPVPVDED---GIDPEALEEALAQWK----PKAVYVTPTFQNPT  240 (459)
T ss_pred             -------CCCEEEEcCCCcHHHHHHHHHcCC---cEEecCCCCC---CCCHHHHHHHHhhcC----CcEEEECCCCCCCC
Confidence                   789999999999999999999999   9999999853   699999999997641    11344444578899


Q ss_pred             cccCCh---hHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCC--CCeeEEccCCcCCCCCcceEEEeeCchhhh
Q 037144          247 TAVDPL---KPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEC--VDSFSFNPHKWLFTTLDCCCLWVKDPSCLL  321 (502)
Q Consensus       247 G~idpl---~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~--aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~  321 (502)
                      |..-++   ++|.++|++||+|++-|..|+-.....+.... +.++..  --....+++|.+.....+|++..... ...
T Consensus       241 G~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~-l~~ld~~~rViy~gSFSK~l~PglRlG~vv~p~~-~~~  318 (459)
T COG1167         241 GVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPP-LKALDAPGRVIYLGSFSKTLAPGLRLGYVVAPPE-LIE  318 (459)
T ss_pred             CCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCC-hHhhCCCCCEEEEeeehhhcccccceeeeeCCHH-HHH
Confidence            998665   58999999999999999999776654322211 111112  22456679999998899999887543 221


Q ss_pred             hhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc--HHHHHHHHHHHHHHHHHHHHHHhcC-CC
Q 037144          322 STLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG--VANLRNFIRSHVGMAKLFERLVTSD-KR  398 (502)
Q Consensus       322 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g--~~g~~~~~~~~~~la~~l~~~l~~~-~~  398 (502)
                       .+..........                    +.......+..-+. .|  ...++++.+.+.+..+.+.+.|.+. |+
T Consensus       319 -~~~~~k~~~~~~--------------------~s~~~Q~~la~~l~-~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~  376 (459)
T COG1167         319 -KLLRLKQAADLG--------------------PSSLSQAALAAFLL-SGHYDRHLRRLRREYARRRDALLEALAEYLPE  376 (459)
T ss_pred             -HHHHHHHHhcCC--------------------CChHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence             111111111000                    00011122222232 33  4456677777788888889999876 32


Q ss_pred             eEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEE-eeeEC----CEEE
Q 037144          399 FEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMT-HAIVG----GIYV  473 (502)
Q Consensus       399 ~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~-~~~~~----g~~~  473 (502)
                      ...+..|..+++.|.-.+...                         +  ..++.++..++|..+.. +..+.    ....
T Consensus       377 ~~~~~~p~gG~flwl~l~~~~-------------------------~--~~~l~~~a~~~gv~i~~~g~~f~~~~~~~~~  429 (459)
T COG1167         377 LATWTRPEGGLFLWLELPEGI-------------------------D--ARELLAAALEKGVVVTPLGSAFSADGDPRNG  429 (459)
T ss_pred             CeeeecCCceEEEEEEcCCCC-------------------------C--HHHHHHHHHHCCCEEEcCCccccCCCCCCCe
Confidence            333445666666554444321                         1  34677777778886655 33232    2458


Q ss_pred             EEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          474 LRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       474 lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      +|+++++.  +++++++.+..|.++.++
T Consensus       430 ~Rl~~s~~--~~e~i~~gi~~l~~~~~~  455 (459)
T COG1167         430 LRLSFSSP--SEEEIEEGIKRLAALLRE  455 (459)
T ss_pred             EEEEcCCC--CHHHHHHHHHHHHHHHHH
Confidence            99999754  567999999988877654

>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]

Probab=99.72  E-value=2.4e-15  Score=143.90  Aligned_cols=298  Identities=14%  Similarity=0.141  Sum_probs=204.3

Q ss_pred             hhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHH
Q 037144          113 AAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAA  192 (502)
Q Consensus       113 ~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa  192 (502)
                      -...+|++    |++|.+-+.         .++.+++-.||-..+...-..         +|+.+||..+..|.|+....
T Consensus       217 ~hv~LE~e----LA~LHqK~a---------ALlFsSCfVANDstLftLak~---------lpgcei~SD~gNHASMI~GI  274 (570)
T KOG1360|consen  217 HHVRLEAE----LADLHQKEA---------ALLFSSCFVANDSTLFTLAKK---------LPGCEIFSDEGNHASMIQGI  274 (570)
T ss_pred             hhhhHHHH----HHHHhcCcc---------eeeeeeeeeccchHHHHHHHH---------CCCcEEeccccchHHHHHHh
Confidence            34556665    678876553         344455555665444443332         28889998888999999998


Q ss_pred             HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccc
Q 037144          193 QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAY  272 (502)
Q Consensus       193 ~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~  272 (502)
                      +-.++   .-..+..       -|+++|+++|+...  ...|.+|......++.|++.||+||.|++++||+...+|..|
T Consensus       275 rns~v---~K~IFrH-------ND~~hL~~lL~~~~--~svPKivAFEtVhSM~GavcpleelcDvah~yGAiTFlDEVH  342 (570)
T KOG1360|consen  275 RNSRV---PKHIFRH-------NDLDHLEQLLQSSP--KSVPKIVAFETVHSMDGAVCPLEELCDVAHKYGAITFLDEVH  342 (570)
T ss_pred             hhcCC---cceeecc-------CCHHHHHHHHHhCC--CCCCceEEEeeeeccCCCcCCHHHHHHHHHHhCceeeeehhh
Confidence            88887   5555553       38999999998754  356889999999999999999999999999999999999998


Q ss_pred             ccccccCccchhh--hcC-CCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhh-cCCcccccCccCCCCCcccccCCC
Q 037144          273 AGSACICPEFRHF--IDG-VECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTL-STNPQYLKNEATDQEPKEQEVGYK  348 (502)
Q Consensus       273 g~~~~~~~~~~~~--~~~-~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~-~~~~~yl~~~~~~~~~~~~~~~~~  348 (502)
                      +.+.+- |.....  -+| +.++|.|+...-|.++.-   |. |+.....+.+.+ +..+.|++.....           
T Consensus       343 AVGlYG-~rGaGvgerdGvm~kvDiIsGTLgKafGcV---GG-YIAat~~LvDmiRSyAaGFIFTTSLP-----------  406 (570)
T KOG1360|consen  343 AVGLYG-PRGAGVGERDGVMHKVDIISGTLGKAFGCV---GG-YIAATRKLVDMIRSYAAGFIFTTSLP-----------  406 (570)
T ss_pred             hhcccc-CCCCCccccCCcchhhhhcccchhhhcccc---cc-eehhhhhHHHHHHHhcCceEEecCCC-----------
Confidence            776542 211111  022 458999999999988643   22 232333333433 5566777654321           


Q ss_pred             cccccCCCCCCc-hHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhc
Q 037144          349 DWQITLCRRFRS-LKLWVVIRNF-GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTK  426 (502)
Q Consensus       349 ~~~~~~sr~~~a-l~~~~~l~~~-g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~  426 (502)
                               ..- ..+..+++.+ +.+|. .+.+.+.++.+++++.|.++ |+.++..| +.||.+++..          
T Consensus       407 ---------P~vl~GAleaVr~lk~~eg~-~lR~~hqrnv~~~kq~l~~~-GiPVi~~p-SHIiPv~vgd----------  464 (570)
T KOG1360|consen  407 ---------PMVLAGALEAVRILKSEEGR-VLRRQHQRNVKYVKQLLMEL-GIPVIPNP-SHIIPVRVGD----------  464 (570)
T ss_pred             ---------hHHHHhHHHHHHHHhhhhhH-HHHHHHHHHHHHHHHHHHHc-CCcccCCC-cceeeeeccC----------
Confidence                     111 2334455555 34453 45566778889999999887 88887444 5677777754          


Q ss_pred             ccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEE----eeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          427 YKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMT----HAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       427 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~----~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                                        ..++.++.+.|..+..+++-    |++..|...||+..+-.+ +.+-++.+++.+..+..+
T Consensus       465 ------------------a~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~H-T~~mm~~lv~~l~~vw~~  524 (570)
T KOG1360|consen  465 ------------------AALAKQASDILISKHNIYVQAINYPTVARGTERLRIAPTPHH-TPQMMNILVNALLDVWNE  524 (570)
T ss_pred             ------------------HHHHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCCCCC-CHHHHHHHHHHHHHHHHH
Confidence                              23467788888877666654    455578889999987555 566999999999887654

>PRK05839 hypothetical protein; Provisional

Probab=99.72  E-value=6.6e-15  Score=149.84  Aligned_cols=317  Identities=12%  Similarity=0.057  Sum_probs=189.9

Q ss_pred             HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHH-HHHHHh
Q 037144           90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARD-RVLKKI  168 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~-~~~~~~  168 (502)
                      +..+.+.+....+. ...|....+..++.+.+++|+++.+|.+-..     ...++|+|+++++...+.+... .     
T Consensus        39 ~~~~~~a~~~~~~~-~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~-----~~I~it~G~~~al~~~~~~~~~~~-----  107 (374)
T PRK05839         39 PKFIQDALKNNAHL-LNKYPKSAGEESLREAQRGFFKRRFKIELKE-----NELIPTFGTREVLFNFPQFVLFDK-----  107 (374)
T ss_pred             CHHHHHHHHHHhhc-cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCc-----ceEEEecCcHHHHHHHHHHHhcCC-----
Confidence            34555555544332 3345544566789999999999998853211     2688999988887655444321 1     


Q ss_pred             CccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144          169 GRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA  248 (502)
Q Consensus       169 ~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~  248 (502)
                           +++.|++..+++..+...++..|+   +++.+|.+.++.+.+|+++.+  +. .      +.+|+++.++|+||.
T Consensus       108 -----~gd~vlv~~P~y~~~~~~~~~~g~---~v~~v~~~~~~~~~~d~~~~~--~~-~------~k~v~i~nP~NPTG~  170 (374)
T PRK05839        108 -----QNPTIAYPNPFYQIYEGAAIASRA---KVLLMPLTKENDFTPSLNEKE--LQ-E------VDLVILNSPNNPTGR  170 (374)
T ss_pred             -----CCCEEEECCCCchhhHHHHHhcCC---EEEEeecccccCCcCCcchhh--hc-c------ccEEEEeCCCCCcCc
Confidence                 467888888999999999999999   999999976555677765432  21 1      336777899999999


Q ss_pred             cC---ChhHHHHHHHHhCCEEEeecccccccccCccchhhhc-----CCCC-CC-eeEEccCCcC-CCCCcceEEEeeCc
Q 037144          249 VD---PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFID-----GVEC-VD-SFSFNPHKWL-FTTLDCCCLWVKDP  317 (502)
Q Consensus       249 id---pl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~-----~~~~-aD-si~~~~hK~l-~~p~~~g~~~~r~~  317 (502)
                      +-   .+++|+++|+++|+|+++|.+|+..... +.......     +... -. .++.++.|.+ .....+|+++. ++
T Consensus       171 ~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~-~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~-~~  248 (374)
T PRK05839        171 TLSLEELIEWVKLALKHDFILINDECYSEIYEN-TPPPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIAG-DA  248 (374)
T ss_pred             ccCHHHHHHHHHHHHHcCCEEEeccchhhcccC-CCCCCHhhhhcccCccccCcEEEEeccccccCCccceeEEEec-CH
Confidence            84   4677788899999999999999764321 11111111     0001 12 4456799975 45677788776 33


Q ss_pred             hhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcC
Q 037144          318 SCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF-GVANLRNFIRSHVGMAKLFERLVTSD  396 (502)
Q Consensus       318 ~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~la~~l~~~l~~~  396 (502)
                      .... .+.....++...                    .   ..+...++...+ ..+.+++..++..++.+.+.+.|   
T Consensus       249 ~~~~-~~~~~~~~~~~~--------------------~---~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l---  301 (374)
T PRK05839        249 SILK-KYKAYRTYLGCA--------------------S---PLPLQKAAAVAWLDDEHAEFFRNIYAKNLKLAREIL---  301 (374)
T ss_pred             HHHH-HHHHHHhhcCCC--------------------C---ChHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHhc---
Confidence            3322 221111111100                    0   111122222222 23445566666666666666554   


Q ss_pred             CCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh-cCcEEEEeeeEC----CE
Q 037144          397 KRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV-SGKVFMTHAIVG----GI  471 (502)
Q Consensus       397 ~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~----g~  471 (502)
                       ++.  .++....+.+++.+                               ..++.+++.+ .|..+.++..+.    +.
T Consensus       302 -~~~--~p~gg~fi~~~~~~-------------------------------~~~~~~~l~~~~gi~v~pg~~f~~~~~~~  347 (374)
T PRK05839        302 -GIT--IPPATFYVWLPVDN-------------------------------DEEFTKKLYQNEGIKVLPGSFLGRNGIGK  347 (374)
T ss_pred             -CCC--CCCeeEEEEEeCCC-------------------------------hHHHHHHHHHHCCEEEeCchhhCCCCCCC
Confidence             222  23333344444321                               1245566654 676555433332    24


Q ss_pred             EEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144          472 YVLRFAAGNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       472 ~~lR~~~~~~~t~~~di~~~~~~l~~~~~  500 (502)
                      .++|++++.   +++++.++++.|.++.+
T Consensus       348 ~~iRis~~~---~~~~~~~~l~~l~~~l~  373 (374)
T PRK05839        348 GYVRIALVY---DTPKLEKALEIIKTYLE  373 (374)
T ss_pred             CeEEEEecC---CHHHHHHHHHHHHHHhh
Confidence            799999962   47799999999988764

>PRK07582 cystathionine gamma-lyase; Validated

Probab=99.71  E-value=2e-15  Score=152.65  Aligned_cols=229  Identities=17%  Similarity=0.127  Sum_probs=153.1

Q ss_pred             cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144          110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ  189 (502)
Q Consensus       110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~  189 (502)
                      ..|...++|+.    ++++.+  .        ..+++++|+.|+..++.+...           +++.|+++...|+...
T Consensus        49 ~~p~~~~Le~~----lA~l~~--~--------~~v~~~sG~~Ai~~~l~all~-----------~Gd~Vl~~~~~y~~~~  103 (366)
T PRK07582         49 SNPTWRALEAA----LGELEG--A--------EALVFPSGMAAITAVLRALLR-----------PGDTVVVPADGYYQVR  103 (366)
T ss_pred             CCccHHHHHHH----HHHHcC--C--------CEEEECCHHHHHHHHHHHhcC-----------CCCEEEEeCCCcHhHH
Confidence            45566677766    455552  2        467888888887666554322           6778888888887665


Q ss_pred             HHH----HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144          190 KAA----QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW  265 (502)
Q Consensus       190 ~aa----~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~  265 (502)
                      ..+    ...|+   +++.++.++.  +    +    .+.++      ..+|++..++|++|.+.|+++|+++|+++|++
T Consensus       104 ~~~~~~l~~~G~---~v~~v~~~~~--~----~----~~~~~------t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~  164 (366)
T PRK07582        104 ALAREYLAPLGV---TVREAPTAGM--A----E----AALAG------ADLVLAETPSNPGLDVCDLAALAAAAHAAGAL  164 (366)
T ss_pred             HHHHHHHhcCeE---EEEEECCCCh--H----H----HhccC------ceEEEEECCCCCCCCccCHHHHHHHHHHcCCE
Confidence            543    34688   8999987531  1    1    12222      23788889999999999999999999999999


Q ss_pred             EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCccc
Q 037144          266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQ  343 (502)
Q Consensus       266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~  343 (502)
                      ++||++|+......| ..      .++|.++.++|||+++|.+  .|+++.+++.... .+.....+...          
T Consensus       165 lvVD~t~~~~~~~~p-~~------~g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~-~l~~~~~~~g~----------  226 (366)
T PRK07582        165 LVVDNTTATPLGQRP-LE------LGADLVVASDTKALTGHSDLLLGYVAGRDPELMA-AVERWRLLAGA----------  226 (366)
T ss_pred             EEEECCCCCccccCc-hh------cCCcEEEecccccccCCCCeeEEEEEcCcHHHHH-HHHHHHHHhCC----------
Confidence            999999864321111 11      1689999999999988766  4666665554322 22111111110          


Q ss_pred             ccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec----C--C-----------C
Q 037144          344 EVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAF----P--R-----------N  406 (502)
Q Consensus       344 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~----~--~-----------~  406 (502)
                                   ...++..|..++.+  +-+..++++..+++..+.+.|++.|.++-+.    +  |           .
T Consensus       227 -------------~~~~~~a~l~~r~l--~tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~  291 (366)
T PRK07582        227 -------------IPGPFEAWLAHRSL--GTLGLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRF  291 (366)
T ss_pred             -------------CCCHHHHHHHHhcc--ccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCC
Confidence                         11345566666544  5577888999999999999999999887543    1  2           3


Q ss_pred             eeEEEEEee
Q 037144          407 FSLVCFRVT  415 (502)
Q Consensus       407 ~~~v~f~~~  415 (502)
                      .++++|.+.
T Consensus       292 gg~~s~~~~  300 (366)
T PRK07582        292 GGLVSFELA  300 (366)
T ss_pred             cceEEEEeC
Confidence            568888874

>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional

Probab=99.71  E-value=1.5e-14  Score=148.45  Aligned_cols=293  Identities=13%  Similarity=0.096  Sum_probs=171.8

Q ss_pred             HHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCC
Q 037144          118 ENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGI  197 (502)
Q Consensus       118 e~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Gl  197 (502)
                      ..++.+.|+++.+.+         ..+++++||+||..|+..+|.......+....+..+|......|-+..-+..+.+-
T Consensus        84 ~~~l~~~l~~~~~~~---------~~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~  154 (396)
T PRK04073         84 LGPWYEKVAKLTGKD---------MVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSE  154 (396)
T ss_pred             HHHHHHHHHhcCCCC---------eEEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCC
Confidence            344556667776542         47899999999999999998753221111000233455555567665555554442


Q ss_pred             CC---------CCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHHHHHhCC
Q 037144          198 DR---------KNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDVAKQFGI  264 (502)
Q Consensus       198 g~---------~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~~~~g~  264 (502)
                      ..         ..+..+|.       -|+++|+++++++      +.+|+++...+++|.+-|    +++|.++|++||+
T Consensus       155 ~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~i~~~------~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~  221 (396)
T PRK04073        155 EEYKRGFGPMLPGIKKIPY-------GDLEALKAAITPN------TAAFLVEPIQGEAGINIPPEGFLKAARELCKEENV  221 (396)
T ss_pred             cccccCCCCCCCCceEeCC-------CCHHHHHHhcccC------eEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCC
Confidence            10         01233332       1789999888643      347888888899999855    8999999999999


Q ss_pred             EEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCcccccCccCCCCCccc
Q 037144          265 WVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQ  343 (502)
Q Consensus       265 ~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~  343 (502)
                      ++++|.+|.++......+.....++ ..|.+++  .|.++.+ ...|+++.++ +.. +.+....    ..         
T Consensus       222 lli~DEv~~g~g~~g~~~~~~~~~~-~pdi~~~--sK~lg~gg~~ig~~~~~~-~i~-~~~~~~~----~~---------  283 (396)
T PRK04073        222 LFIADEIQTGLGRTGKLFACDWDNV-TPDMYIL--GKALGGGVFPISCVAANR-DIL-GVFTPGS----HG---------  283 (396)
T ss_pred             EEEEecchhCCCcCcHHHHhhhcCC-CCCEEEe--cccccCCCCcceEEEEcH-HHH-hhhcCCC----CC---------
Confidence            9999999986432111111011222 4677775  5998766 5678877653 222 2221100    00         


Q ss_pred             ccCCCcccccCCCCCCchHHH---HHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC--CeEEecCCCeeEEEEEeecCc
Q 037144          344 EVGYKDWQITLCRRFRSLKLW---VVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK--RFEVAFPRNFSLVCFRVTPSA  418 (502)
Q Consensus       344 ~~~~~~~~~~~sr~~~al~~~---~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~--~~~l~~~~~~~~v~f~~~~~~  418 (502)
                            .+. ++   ..+...   ++|+.+..+   .+.++..+++++|.+.|+++.  .+..+ ++...++.+.+... 
T Consensus       284 ------~t~-~~---~~~~~aaa~aaL~~~~~~---~l~~~~~~~~~~l~~~L~~l~~~~i~~~-~~~g~~~~~~~~~~-  348 (396)
T PRK04073        284 ------STF-GG---NPLACAVSIAALEVLEEE---KLPERSLELGEYFKEQLKEIDNPMIKEV-RGRGLFIGVELNEP-  348 (396)
T ss_pred             ------CCC-CC---CHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHhhcCCcccce-ecceEEEEEEecch-
Confidence                  000 11   223333   334333222   355667788999999998762  22222 23344444444211 


Q ss_pred             chhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144          419 VMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEH  498 (502)
Q Consensus       419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~  498 (502)
                                                   ...+.++|.++|.++ .+   .+..++|++.. ...++++|++++++|+++
T Consensus       349 -----------------------------~~~~~~~l~~~Gv~~-~~---~~~~~iRi~p~-l~~t~e~i~~~~~~l~~~  394 (396)
T PRK04073        349 -----------------------------ARPYCEALKEEGLLC-KE---THETVIRFAPP-LVITKEELDWAFEKIKAV  394 (396)
T ss_pred             -----------------------------HHHHHHHHHHCCeEE-ec---CCCCEEEEECC-cccCHHHHHHHHHHHHHH
Confidence                                         235667777778653 32   13358999973 345777999999999876


Q ss_pred             H
Q 037144          499 L  499 (502)
Q Consensus       499 ~  499 (502)
                      .
T Consensus       395 l  395 (396)
T PRK04073        395 L  395 (396)
T ss_pred             h
Confidence            4

>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional

Probab=99.71  E-value=6.4e-15  Score=151.95  Aligned_cols=253  Identities=11%  Similarity=0.084  Sum_probs=157.2

Q ss_pred             ChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHH
Q 037144          111 SPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQK  190 (502)
Q Consensus       111 ~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~  190 (502)
                      ++...++|++    +++++|.+         ..++++|||+|+..++.+.......+.+.  .+++.|+++..+|.+...
T Consensus        62 G~~~~~fe~~----lA~~~g~~---------~~v~~~sGt~al~~aL~al~~~~~~~~~~--~pGd~VIv~~~t~~a~~~  126 (438)
T PRK15407         62 GRFNDAFEKK----LAEFLGVR---------YALLVNSGSSANLLAFSALTSPKLGDRAL--KPGDEVITVAAGFPTTVN  126 (438)
T ss_pred             ChhHHHHHHH----HHHHhCCC---------eEEEECCHHHHHHHHHHHHhhccccccCC--CCCCEEEECCCCcHHHHH
Confidence            3445566655    56666664         36889999999998887654221111000  167889999999999999


Q ss_pred             HHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeec
Q 037144          191 AAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDA  270 (502)
Q Consensus       191 aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDa  270 (502)
                      ++...|+   .++.++++.. ++.+|+++++++++++++      +|++++   ..|...++++|.++|+++|+++++|+
T Consensus       127 ~v~~~G~---~pv~vdvd~~-~~~id~~~le~~i~~~tk------aVi~~~---~~G~p~dl~~I~~la~~~gi~vIeDa  193 (438)
T PRK15407        127 PIIQNGL---VPVFVDVELP-TYNIDASLLEAAVSPKTK------AIMIAH---TLGNPFDLAAVKAFCDKHNLWLIEDN  193 (438)
T ss_pred             HHHHcCC---EEEEEecCCC-cCCcCHHHHHHHcCcCCe------EEEEeC---CCCChhhHHHHHHHHHHCCCEEEEEC
Confidence            9999999   9999998753 578999999999876443      566655   36777899999999999999999999


Q ss_pred             ccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccC-------------ccCC
Q 037144          271 AYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKN-------------EATD  337 (502)
Q Consensus       271 A~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~-------------~~~~  337 (502)
                      ||+.+.......-.   .+..+-++++.+.|.+.+.. .|+++++++....... ....+=..             ....
T Consensus       194 a~a~G~~~~g~~~G---~~gd~~~fSf~~~k~~~~ge-GG~l~t~d~~l~~~~~-~~~~~G~~~~~~~~~~~~~~~~~~~  268 (438)
T PRK15407        194 CDALGSTYDGRMTG---TFGDIATLSFYPAHHITMGE-GGAVFTNDPLLKKIIE-SFRDWGRDCWCAPGCDNTCGKRFGW  268 (438)
T ss_pred             ccchhhhcCCeeee---ccCceEEEeCCCCCCccccC-ceEEEECCHHHHHHHH-HHHHhCccccccccccccccccccc
Confidence            99877654322111   11122244445556665543 4777777765432211 00000000             0000


Q ss_pred             CCCccc-ccCCC-ccc-ccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 037144          338 QEPKEQ-EVGYK-DWQ-ITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKR  398 (502)
Q Consensus       338 ~~~~~~-~~~~~-~~~-~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~  398 (502)
                        ..+. ...+. .+. ...+-.++.-.+.+++-....+.+++++++..++++++.+.|..+++
T Consensus       269 --~~~~~~~~~~~~~~~~~~G~n~rmsel~AAig~~qL~~l~~~~~~R~~~a~~y~~~L~~~~~  330 (438)
T PRK15407        269 --QLGELPFGYDHKYTYSHLGYNLKITDMQAAIGLAQLEKLPGFIEARKANFAYLKEGLASLED  330 (438)
T ss_pred             --ccccccccccccccccccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence              0000 00000 000 01122223334444554445577889999999999999999998875

>PRK05967 cystathionine beta-lyase; Provisional

Probab=99.71  E-value=2.3e-15  Score=152.06  Aligned_cols=232  Identities=11%  Similarity=0.132  Sum_probs=160.3

Q ss_pred             cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144          110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ  189 (502)
Q Consensus       110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~  189 (502)
                      ..|....+|    +.++.+-|.+         ..+++++|+.|+..++.+...           +++.|+++...|.++.
T Consensus        62 gnPt~~~Le----~~la~le~~~---------~~v~~sSG~aAi~~~l~all~-----------~GD~Vlv~~~~Y~~~~  117 (395)
T PRK05967         62 GTPTTDALC----KAIDALEGSA---------GTILVPSGLAAVTVPFLGFLS-----------PGDHALIVDSVYYPTR  117 (395)
T ss_pred             CChHHHHHH----HHHHHHhCCC---------CEEEECcHHHHHHHHHHHhcC-----------CCCEEEEccCCcHHHH
Confidence            344444444    4566665533         357777788888777655533           7888999988988765


Q ss_pred             H----HHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144          190 K----AAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW  265 (502)
Q Consensus       190 ~----aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~  265 (502)
                      .    .++..|+   ++..++.+       +.+.++++++++++      +|+++.++|+++.+.||++|+++|+++|++
T Consensus       118 ~l~~~~l~~~Gi---~v~~vd~~-------~~e~l~~al~~~Tk------lV~lesPsNP~l~v~dl~~I~~la~~~g~~  181 (395)
T PRK05967        118 HFCDTMLKRLGV---EVEYYDPE-------IGAGIAKLMRPNTK------VVHTEAPGSNTFEMQDIPAIAEAAHRHGAI  181 (395)
T ss_pred             HHHHHHHHhcCe---EEEEeCCC-------CHHHHHHhcCcCce------EEEEECCCCCCCcHHHHHHHHHHHHHhCCE
Confidence            4    4567788   88888642       35778888876543      899999999999999999999999999999


Q ss_pred             EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCccc
Q 037144          266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQ  343 (502)
Q Consensus       266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~  343 (502)
                      ++||++|+.....-| ...      ++|.+..+..|++++..+  .|+ ++.++.......    .+...          
T Consensus       182 vvVD~t~a~p~~~~p-l~~------GaDivv~S~tKy~~Gh~d~~~G~-v~~~~~~~~~l~----~~~~~----------  239 (395)
T PRK05967        182 VMMDNTWATPLYFRP-LDF------GVDISIHAATKYPSGHSDILLGT-VSANEKCWPQLL----EAHGT----------  239 (395)
T ss_pred             EEEECCccCceecCh-hHc------CCCEEEEecccccCCCCCeeEEE-EEcCHHHHHHHH----HHHHH----------
Confidence            999999977543322 221      899999999999754322  343 344443211111    00000          


Q ss_pred             ccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe-cC-----C-----------C
Q 037144          344 EVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA-FP-----R-----------N  406 (502)
Q Consensus       344 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~-~~-----~-----------~  406 (502)
                                .+-...+..+|..++  |.+-+.-+++++.++|..+.+.|+++|.++-+ .|     |           .
T Consensus       240 ----------~G~~~~p~da~l~~r--gl~Tl~lR~~~~~~na~~lA~~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~  307 (395)
T PRK05967        240 ----------LGLCAGPDDTYQILR--GLRTMGIRLEHHRKSALEIARWLEGRPDVARVLHPALPSFPGHEIWKRDFSGA  307 (395)
T ss_pred             ----------cCCCCCHHHHHHHHc--CcccHHHHHHHHHHHHHHHHHHHHhCCCCcEEECCCCCCCccHHHHHHhCCCC
Confidence                      111224566776665  66888999999999999999999999988533 22     1           1


Q ss_pred             eeEEEEEee
Q 037144          407 FSLVCFRVT  415 (502)
Q Consensus       407 ~~~v~f~~~  415 (502)
                      .++++|.+.
T Consensus       308 gg~~sf~l~  316 (395)
T PRK05967        308 SGIFSFVLA  316 (395)
T ss_pred             ceEEEEEEc
Confidence            468888885

>PRK07392 threonine-phosphate decarboxylase; Validated

Probab=99.71  E-value=2.1e-14  Score=145.53  Aligned_cols=289  Identities=13%  Similarity=0.053  Sum_probs=177.2

Q ss_pred             HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH
Q 037144          115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI  194 (502)
Q Consensus       115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~  194 (502)
                      .++.+.    +++.++++.+       ..++|+|+++++...+.+. .           +++.|++..+++..+...++.
T Consensus        60 ~~Lr~a----ia~~~~v~~~-------~I~it~G~~~~i~~~~~~l-~-----------~g~~vlv~~P~y~~~~~~~~~  116 (360)
T PRK07392         60 RELRLA----LAQHHQLPPE-------WILPGNGAAELLTWAGREL-A-----------QLRAVYLITPAFGDYRRALRA  116 (360)
T ss_pred             HHHHHH----HHHHhCcChh-------hEEECCCHHHHHHHHHHHh-C-----------CCCeEEEECCCcHHHHHHHHH
Confidence            445555    4455577654       6889999988876555432 1           344677888899999999999


Q ss_pred             cCCCCCCEEEEecCCCCCc---ccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecc
Q 037144          195 VGIDRKNIRAIKTTKSSSY---GLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAA  271 (502)
Q Consensus       195 ~Glg~~~v~~v~~~~~~~~---~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA  271 (502)
                      +|+   +++.+|++.++.+   ..+++.+++...       .+.+++++.++|+||.+-+.++|.++++++++ +++|.+
T Consensus       117 ~g~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~l~nP~NPTG~~~~~~~l~~l~~~~~~-~IiDE~  185 (360)
T PRK07392        117 FGA---TVKELPLPLDQPSPGLTLRLQTLPPQLT-------PNDGLLLNNPHNPTGKLWSREAILPLLEQFAL-VVVDEA  185 (360)
T ss_pred             cCC---eEEEEecccccCCcccccCHHHHHHhcc-------CCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCE-EEEECc
Confidence            999   9999999754332   245555544321       23478888999999999999999999999985 677999


Q ss_pred             cccccccCccchhhhcCCCCC-C-eeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCC
Q 037144          272 YAGSACICPEFRHFIDGVECV-D-SFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYK  348 (502)
Q Consensus       272 ~g~~~~~~~~~~~~~~~~~~a-D-si~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~  348 (502)
                      |..+.... ........+... . .+..++.|.++ ....+|+++.. ...+. .+......                  
T Consensus       186 y~~~~~~~-~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~-~~~~~-~~~~~~~~------------------  244 (360)
T PRK07392        186 FMDFLPPD-AEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAH-PDRLQ-RWQQWRDP------------------  244 (360)
T ss_pred             hhhhccCc-cccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCC-HHHHH-HHHhhCCC------------------
Confidence            97664321 111111111122 2 44567999998 66778888764 33332 22111000                  


Q ss_pred             cccccCCCCCCchHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcc
Q 037144          349 DWQITLCRRFRSLKLWVVIRNFGV-ANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKY  427 (502)
Q Consensus       349 ~~~~~~sr~~~al~~~~~l~~~g~-~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~  427 (502)
                       +      ....+..+++...+.. +..+...+...+.++++.+.|++++++.+. ++..+.+.++....          
T Consensus       245 -~------~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~~~~~fl~~~~~~~----------  306 (360)
T PRK07392        245 -W------PVNGLAAAAAIAALADRDFQQQTWAWLPPAREALFQGLASLPGLTPL-PSAANFLLVQSQGS----------  306 (360)
T ss_pred             -C------CCCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-CCCCCEEEEEcCCC----------
Confidence             0      0123344444444432 333444556677788899999988888765 44444444333211          


Q ss_pred             cCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeEC--CEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144          428 KNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVG--GIYVLRFAAGNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       428 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~  500 (502)
                                          ..++.+++. +.|..+.++..+.  +..++|++++.    .++.+++.++|+++..
T Consensus       307 --------------------~~~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~~~~----~~~~~~l~~al~~~~~  358 (360)
T PRK07392        307 --------------------ALQLQEKLLQQHRILIRDCLSFPELGDRYFRVAVRT----EAENQRLLEALAAILA  358 (360)
T ss_pred             --------------------HHHHHHHHHhhCCEEEEeCCCCCCCCCCEEEEEeCC----HHHHHHHHHHHHHHhh
Confidence                                235566654 4576555444443  34699999873    3356677777766543

>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase

Probab=99.71  E-value=5.2e-15  Score=153.83  Aligned_cols=365  Identities=12%  Similarity=0.085  Sum_probs=202.6

Q ss_pred             HHHHHHHHHHhhcCCCCcccccCh-hhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHH-HHH
Q 037144           89 VAGIVGEMLSSGFNVVGLDWISSP-AAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDR-VLK  166 (502)
Q Consensus        89 ~~~~~~~~l~~~~n~~~~~~~~~p-~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~-~~~  166 (502)
                      ++..+.++....++.   .|.... .....|+.+.+++.+.++.....  .+.-..++|+|+++|+..++.+.... ++.
T Consensus       108 ~~~~~~~~~~~~~~~---~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~--~~~~~V~it~Gat~al~~~~~~l~~~~ll~  182 (521)
T TIGR03801       108 PDAFLYEMCDGIIGD---NYPVPDRMLPHSEKIVHQYLIQEMCGNKPP--PGEFDLFAVEGGTAAMCYIFDSLKANELLK  182 (521)
T ss_pred             CCHHHHHHHHHhhcC---CCCCCCCCHHHHHHHHHHHHHhhccCCCCC--CCcCeEEEeCCHHHHHHHHHHHHhHhhcCC
Confidence            445565555554433   354333 34456665557777765432110  00015889999999988776653211 111


Q ss_pred             HhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCC-----cccCHHHHHHHHHHHHhcCCccEEEEEec
Q 037144          167 KIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSS-----YGLSAESVLSQINLDVEAELIPLFLCATV  241 (502)
Q Consensus       167 ~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~-----~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~  241 (502)
                             +++.|++..+.+..+...+++.|.|. +++.|++++..+     |.+|+++|++++++.++      +|+++.
T Consensus       183 -------pGD~Vlv~~P~y~~y~~~~~l~~~g~-~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~~~~k------ai~l~n  248 (521)
T TIGR03801       183 -------KGDKIALMTPIFTPYLEIPELPRYDF-EVVRIKADEMTEDGTHTWQYPDKELEKLRDPSIK------ALFVVN  248 (521)
T ss_pred             -------CCCEEEEeCCCcHHHHHHHHHhcCCc-EEEEeecccccccccccCCCCHHHHHHhcCCCCc------EEEEeC
Confidence                   67889999999999988888875422 677777754322     88999999987755433      777889


Q ss_pred             CCccccccCC---hhHHHHHHHHh--CCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCC-CCCcceEEEee
Q 037144          242 GTTAITAVDP---LKPLCDVAKQF--GIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLF-TTLDCCCLWVK  315 (502)
Q Consensus       242 gtt~~G~idp---l~eI~~i~~~~--g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r  315 (502)
                      ++|+||.+-+   +++|+++|++|  ++|+++|.+|+.+..   .+.........--.++.++.|.++ .....|+++..
T Consensus       249 P~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~---~~~sl~~~~~~~vI~v~SfSK~fg~~G~RlG~i~~~  325 (521)
T TIGR03801       249 PSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVD---DFRSLFAELPYNTIGVYSFSKYFGATGWRLGTIALH  325 (521)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcc---cccchhhhCCCCEEEEEcchhhccCchhhhhhhhcC
Confidence            9999999955   77888889987  999999999986542   222222211112245667999986 55778888775


Q ss_pred             CchhhhhhhcC---------Cccc--ccCccCCCCCcccccCCCcccccCCCC--------CCchHHH-----HHHHHh-
Q 037144          316 DPSCLLSTLST---------NPQY--LKNEATDQEPKEQEVGYKDWQITLCRR--------FRSLKLW-----VVIRNF-  370 (502)
Q Consensus       316 ~~~~l~~~~~~---------~~~y--l~~~~~~~~~~~~~~~~~~~~~~~sr~--------~~al~~~-----~~l~~~-  370 (502)
                      +...+...+..         ...|  +...       +....+.+.-...+|.        ......+     ++...+ 
T Consensus       326 ~~~v~d~li~~lp~~~~~~l~~ry~~~~~~-------p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a~~all~  398 (521)
T TIGR03801       326 KDNIFDKLIAELPEEKKKELDKRYSSLTTE-------PRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALMD  398 (521)
T ss_pred             chHHHHHHHHhccHHHHHHHhhhhccccCC-------hhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHhc
Confidence            44221111100         0001  1000       0111111111111110        0111111     122222 


Q ss_pred             -cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe-cCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhh--HH
Q 037144          371 -GVANLRNFIRSHVGMAKLFERLVTSDKRFEVA-FPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERT--NE  446 (502)
Q Consensus       371 -g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~-~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~  446 (502)
                       +.+...+..+.+.++.+.+.+.|    |+.+. .++..+..+|.-.+.-...             .....-...+  +.
T Consensus       399 ~~~~y~~~~~~~~~~R~~~l~~~L----g~~~~~~~~~g~~Y~~~di~~~~~~-------------~~~~~f~~~l~~~~  461 (521)
T TIGR03801       399 KENAYKAETKDICRRREKLLFRGL----GLPLQEDPNDVAYYTLIDLEEWAEK-------------NYGEEFSSYLKKNY  461 (521)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHhc----CCCCcCCCCCeEEEEEeehHHHHHH-------------hcchHHHHHHhccC
Confidence             34455666777777777777777    34332 3456566655433210000             0000000000  00


Q ss_pred             HHHHHHHHHHhc-CcEEEEeeeECC-EEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          447 FNRELLESINVS-GKVFMTHAIVGG-IYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       447 ~~~~l~~~l~~~-g~~~~~~~~~~g-~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      ...+++.+|.++ |.+++++..++. ..++|+|++|  .+++++.++.+.|++++++
T Consensus       462 ~~~~~~~~L~~e~gV~v~PG~~Fg~~~~~vRisla~--l~~~~~~~~~~rl~~~~~~  516 (521)
T TIGR03801       462 SPVDVLFRLAEETGIVLLPGGGFGGPEWSVRVSLAN--LNEYDYAEIGRAIRKILDE  516 (521)
T ss_pred             CHHHHHHHHHHhCCEEEeCchhcCCCCCeEEEEecC--CCHHHHHHHHHHHHHHHHH
Confidence            123556666554 665566555543 4579999976  4667899999999988765

This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).

>PRK04311 selenocysteine synthase; Provisional

Probab=99.70  E-value=1.8e-14  Score=148.53  Aligned_cols=193  Identities=15%  Similarity=0.100  Sum_probs=128.5

Q ss_pred             CCHHHHHHHHHHhhcCCCC---cccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHH
Q 037144           87 SSVAGIVGEMLSSGFNVVG---LDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDR  163 (502)
Q Consensus        87 ~~~~~~~~~~l~~~~n~~~---~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~  163 (502)
                      +..+..+.+.+...+..+.   ..+..+.....+ ..+.+.+++++|.+.         .+++++|+.|+..++.+. . 
T Consensus        96 s~l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~-~~~e~~lA~l~Gae~---------a~vv~sgtaAl~l~l~~l-~-  163 (464)
T PRK04311         96 ALLSEAAIEAVTEAARGYSNLEYDLATGKRGSRD-RALAALLCALTGAED---------ALVVNNNAAAVLLALNAL-A-  163 (464)
T ss_pred             CCCCHHHHHHHHHHHhcccccccchhhcccchHH-HHHHHHHHHHhCCCe---------EEEECCHHHHHHHHHHHh-C-
Confidence            3444555566555543332   112222223333 356778899999763         577888888887766432 1 


Q ss_pred             HHHHhCccCCCCeEEEeCCCCchh------HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEE
Q 037144          164 VLKKIGRENISKLVVYSSDQTHCA------FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFL  237 (502)
Q Consensus       164 ~~~~~~~~~~~~~~v~~s~~~H~s------~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~V  237 (502)
                                +++.|++|...|++      +...++..|+   +++.++++.    ..++++++++|+++++      +|
T Consensus       164 ----------~GdeVIvs~~e~~~~ggs~~i~~~~~~~G~---~l~~v~~~~----~t~~~dle~aI~~~Tk------lV  220 (464)
T PRK04311        164 ----------AGKEVIVSRGELVEIGGAFRIPDVMRQAGA---RLVEVGTTN----RTHLRDYEQAINENTA------LL  220 (464)
T ss_pred             ----------CCCEEEEcchhhhhcCcchhhHHHHHHCCc---EEEEECCCC----CCCHHHHHHhcCccCe------EE
Confidence                      56788888766652      3345677898   999888642    4689999999987654      77


Q ss_pred             EEecCCcc--cc--ccCChhHHHHHHHHhCCEEEeeccccccc----c---cCccchhhhcCCCCCCeeEEccCCcCCCC
Q 037144          238 CATVGTTA--IT--AVDPLKPLCDVAKQFGIWVHVDAAYAGSA----C---ICPEFRHFIDGVECVDSFSFNPHKWLFTT  306 (502)
Q Consensus       238 v~t~gtt~--~G--~idpl~eI~~i~~~~g~~lhVDaA~g~~~----~---~~~~~~~~~~~~~~aDsi~~~~hK~l~~p  306 (502)
                      +.++.+|+  +|  ..-|+++|+++|++||++++||++.|...    +   ..|.....+.  .++|.+++++|||+++|
T Consensus       221 ~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~--~GaDiv~fSg~K~LgGp  298 (464)
T PRK04311        221 LKVHTSNYRIEGFTKEVSLAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLA--AGVDLVTFSGDKLLGGP  298 (464)
T ss_pred             EEEcCCCccccccCCcCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCCchhhHHh--cCCcEEEecCcccccCC
Confidence            77777775  45  56799999999999999999999654321    1   0111111111  28999999999999988


Q ss_pred             CcceEEEeeCc
Q 037144          307 LDCCCLWVKDP  317 (502)
Q Consensus       307 ~~~g~~~~r~~  317 (502)
                      . +|+++.++.
T Consensus       299 ~-~G~i~g~~~  308 (464)
T PRK04311        299 Q-AGIIVGKKE  308 (464)
T ss_pred             c-eEEEEEcHH
Confidence            4 788877643

>TIGR03246 arg_catab_astC succinylornithine transaminase family

Probab=99.70  E-value=2.9e-14  Score=146.14  Aligned_cols=301  Identities=13%  Similarity=0.045  Sum_probs=177.3

Q ss_pred             HHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCC
Q 037144          118 ENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGI  197 (502)
Q Consensus       118 e~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Gl  197 (502)
                      ..++.+.|+++++.+         ..+|++||++||..|+..+|.....+.+ . .+..+|......|-+..-+....|.
T Consensus        79 ~~~la~~L~~~~~~~---------~~~f~~SGseA~e~Alk~ar~~~~~~~~-~-~r~~ii~~~~~yHG~~~~~~~~~~~  147 (397)
T TIGR03246        79 VLRLAKKLVDATFAD---------KVFFCNSGAEANEAALKLARRYALDKHG-A-DKSEIVAFKNSFHGRTLFTVSVGGQ  147 (397)
T ss_pred             HHHHHHHHHhhCCCC---------EEEEeCCcHHHHHHHHHHHHHHHHhcCC-C-CCCEEEEECCCcCCccHHHHHhcCC
Confidence            344556677776542         4799999999999999999875322211 0 1344555566667766555454432


Q ss_pred             C---------CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc----CChhHHHHHHHHhCC
Q 037144          198 D---------RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV----DPLKPLCDVAKQFGI  264 (502)
Q Consensus       198 g---------~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i----dpl~eI~~i~~~~g~  264 (502)
                      .         ...+..+|.       -|+++|++++.+.      +.+|++....++.|.+    +.+++|.++|++||+
T Consensus       148 ~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~------~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~  214 (397)
T TIGR03246       148 PKYSQGFAPLPGGIKHAPY-------NDLAAAKALISDK------TCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNA  214 (397)
T ss_pred             cccccCCCCCCCceEEeCC-------CCHHHHHHHhccC------eEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCC
Confidence            0         012333332       2789999988643      3467777666666744    459999999999999


Q ss_pred             EEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccc
Q 037144          265 WVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQE  344 (502)
Q Consensus       265 ~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~  344 (502)
                      ++++|.+|.|......-+.....++ ..|.+++  .|.++..+..|+++.++.  +.+.+....    ..          
T Consensus       215 llI~DEv~tG~Gr~G~~~a~~~~gv-~pDi~t~--~K~lggG~pigav~~~~~--i~~~~~~~~----~~----------  275 (397)
T TIGR03246       215 LLIFDEVQTGVGRTGELYAYMHYGV-TPDILTS--AKALGGGFPIGAMLTTTE--IAAHLKVGT----HG----------  275 (397)
T ss_pred             EEEEechhhcCCccccchhhhhcCC-CCCEEEe--ehhhhCCcceeEEEEcHH--HHHhccCCC----cC----------
Confidence            9999999865522111111111233 5787765  698876677888877543  223332110    00          


Q ss_pred             cCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEec--CCCeeEEEEEeecCcchh
Q 037144          345 VGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK-RFEVAF--PRNFSLVCFRVTPSAVMD  421 (502)
Q Consensus       345 ~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~-~~~l~~--~~~~~~v~f~~~~~~~~~  421 (502)
                           .++ ++.+.......+++..+..   .++.++..++.++|++.|+++. .+.++.  .....++.+.+.+..   
T Consensus       276 -----~t~-~~~p~~~aaa~a~l~~~~~---~~l~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~---  343 (397)
T TIGR03246       276 -----TTY-GGNPLACAVAGKVLDLVNT---PELLAGVKQRHDLFVDGLEKINARYNVFSEIRGKGLLIGAVLTEAY---  343 (397)
T ss_pred             -----CCC-CCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhcCCCeEeeecCceEEEEEEcCch---
Confidence                 011 1111122333344444322   4567888889999999887752 122221  112233344332210   


Q ss_pred             hhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          422 KLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                                             ......+.+.+.++|.+....    +..++|++.. ...+++||++++++|.++.++
T Consensus       344 -----------------------~~~~~~~~~~l~~~Gv~~~~~----g~~~lR~~p~-~~~t~~~i~~~~~~l~~~l~~  395 (397)
T TIGR03246       344 -----------------------QGKAKQFVNAAAEEGVIALIA----GPNVVRFAPS-LVISDDDIDEGLARFERAIEQ  395 (397)
T ss_pred             -----------------------hhHHHHHHHHHHHCCeEEeec----CCCEEEEeCC-CCCCHHHHHHHHHHHHHHHHH
Confidence                                   123457778888889764332    3468999864 445777999999999987764

Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.

>PRK08637 hypothetical protein; Provisional

Probab=99.70  E-value=2.2e-14  Score=146.79  Aligned_cols=333  Identities=9%  Similarity=0.032  Sum_probs=192.7

Q ss_pred             HHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcC-CCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144           91 GIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLD-LPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG  169 (502)
Q Consensus        91 ~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g-~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~  169 (502)
                      ..+.+.+..........|....+..++.+.+.+++.+..+ .....    ....++|+|+++++.+.+.+..+       
T Consensus        23 ~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~----~~~I~it~G~~~al~~~~~~l~~-------   91 (388)
T PRK08637         23 SSLQDLLNDLTPDEIFPYAPPQGIPELRDLWQEKMLRENPSLSGKK----MSLPIVTNALTHGLSLVADLFVD-------   91 (388)
T ss_pred             HHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHHhccCccccccc----cceeeEccchHHHHHHHHHHhcC-------
Confidence            3344444433233345566656677788887777776543 22110    01468999999988766655433       


Q ss_pred             ccCCCCeEEEeCCCCchhHHHHH-HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144          170 RENISKLVVYSSDQTHCAFQKAA-QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA  248 (502)
Q Consensus       170 ~~~~~~~~v~~s~~~H~s~~~aa-~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~  248 (502)
                          +++.|++..+++..+...+ ...|.   +++.+|+..+ ++.+|+++|+++++.....  ...+++.+.++|+||.
T Consensus        92 ----~gd~Vlv~~P~y~~~~~~~~~~~g~---~vv~v~~~~~-~~~~d~~~l~~~~~~~~~~--~~~~~~~~~P~NPTG~  161 (388)
T PRK08637         92 ----QGDTVLLPDHNWGNYKLTFNTRRGA---EIVTYPIFDE-DGGFDTDALKEALQAAYNK--GKVIVILNFPNNPTGY  161 (388)
T ss_pred             ----CCCEEEEcCCCCccHHHHHHHhcCC---EEEEecccCC-CCcCCHHHHHHHHHhhccC--CCEEEEEeCCCCCCCC
Confidence                6778889989998888764 46898   9999998422 3478999999988722111  1246777779999998


Q ss_pred             c---CChhHHHHHHHH-----hCCEEEeecccccccccCccchhh---hcCC-CCCCeeE-EccCCcC-CCCCcceEEEe
Q 037144          249 V---DPLKPLCDVAKQ-----FGIWVHVDAAYAGSACICPEFRHF---IDGV-ECVDSFS-FNPHKWL-FTTLDCCCLWV  314 (502)
Q Consensus       249 i---dpl~eI~~i~~~-----~g~~lhVDaA~g~~~~~~~~~~~~---~~~~-~~aDsi~-~~~hK~l-~~p~~~g~~~~  314 (502)
                      +   +.+++|+++|++     |++++++|.+|....+........   +... ++.-++. .++.|.+ .....+|++++
T Consensus       162 ~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~  241 (388)
T PRK08637        162 TPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITF  241 (388)
T ss_pred             CCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEE
Confidence            8   456777777775     899999999997765422111111   1111 1222233 2788965 45567898886


Q ss_pred             eC-----chhhhhhhcCCc-ccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHH----HHHHHHHH
Q 037144          315 KD-----PSCLLSTLSTNP-QYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLR----NFIRSHVG  384 (502)
Q Consensus       315 r~-----~~~l~~~~~~~~-~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~----~~~~~~~~  384 (502)
                      ..     +... +.+.... .+.....                 .   ....+...++...+....+.    +......+
T Consensus       242 ~~~~~~~~~l~-~~~~~~~~~~~~~~~-----------------~---~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~  300 (388)
T PRK08637        242 GTKAGSSQTVK-EALEKKVKGLIRSNI-----------------S---NGPHPSQSAVLRALNSPEFDKEKQEKFQILKE  300 (388)
T ss_pred             ccccCCcHHHH-HHHHHHHHHHhhccc-----------------C---CCCcHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence            53     3322 2221100 0000000                 0   01223333444444332332    23334455


Q ss_pred             HHHHHHHHHhcC---CCeEEecCCCeeEEEE-EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh-cC
Q 037144          385 MAKLFERLVTSD---KRFEVAFPRNFSLVCF-RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV-SG  459 (502)
Q Consensus       385 la~~l~~~l~~~---~~~~l~~~~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g  459 (502)
                      ..+.+.+.|++.   +++.+. +|..+++.| ++. . .                           ...++.+++.+ .|
T Consensus       301 r~~~~~~~l~~~~~~~~~~~~-~~~~g~~~~~~l~-~-~---------------------------~~~~l~~~l~~~~g  350 (388)
T PRK08637        301 RYEKTKEVLYDGKYDDAWQAY-PFNSGYFMCLKLK-G-V---------------------------DAEELRVHLLEKYG  350 (388)
T ss_pred             HHHHHHHHHHhhCCCCCcccc-cccceEEEEecCC-h-H---------------------------HHHHHHHHHhhhcc
Confidence            555666666554   246654 455555554 332 1 0                           13466777754 46


Q ss_pred             cEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          460 KVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       460 ~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      ..+..    .+..++|++++.  .++++++.+++.|.++.+.
T Consensus       351 v~~~~----~~~~~iRi~~~~--~~~~~i~~~~~~l~~~~~~  386 (388)
T PRK08637        351 IGTIA----LNETDLRIAFSC--VEEEDIPELFDSIYKAIKD  386 (388)
T ss_pred             eEEEe----ccCCceEEEeec--CCHHHHHHHHHHHHHHHHh
Confidence            54332    245689999975  3567999999999888765

>PTZ00125 ornithine aminotransferase-like protein; Provisional

Probab=99.69  E-value=4.1e-14  Score=145.47  Aligned_cols=304  Identities=11%  Similarity=0.072  Sum_probs=174.5

Q ss_pred             HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcC
Q 037144          117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVG  196 (502)
Q Consensus       117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~G  196 (502)
                      ....+.+.+++++|.+         ..+|++|||+||..|+..++.......+....+..+|......|-+...+....+
T Consensus        74 ~~~~~~~~l~~~~~~~---------~~~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~  144 (400)
T PTZ00125         74 VLGLAEKYITDLFGYD---------KVLPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSAST  144 (400)
T ss_pred             HHHHHHHHHHhCCCCC---------EEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcC
Confidence            4445556677777653         4789999999999999998864222111111134455666666766655555443


Q ss_pred             CCC---------CCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHHHHHhC
Q 037144          197 IDR---------KNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDVAKQFG  263 (502)
Q Consensus       197 lg~---------~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~~~~g  263 (502)
                      -..         ..+..++       ..|+++|+++++.     ..+.+|++....+++|.+-|    +++|.++|++||
T Consensus       145 ~~~~~~~~~~~~~~~~~~~-------~~d~~~le~~l~~-----~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~  212 (400)
T PTZ00125        145 DPKCYNNFGPFVPGFELVD-------YNDVEALEKLLQD-----PNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYN  212 (400)
T ss_pred             CcchhccCCCCCCCceEeC-------CCCHHHHHHHhCC-----CCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcC
Confidence            200         0112222       2389999998851     12457777777889999877    999999999999


Q ss_pred             CEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-cceEEEeeCchhhhhhhcCCcccccCccCCCCCcc
Q 037144          264 IWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-DCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKE  342 (502)
Q Consensus       264 ~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~  342 (502)
                      +++++|.+|.+.......+.....++ ..|.++++  |+++.++ +.|+++.++. .. +.+....  ...         
T Consensus       213 ~lli~Dev~~g~g~~G~~~~~~~~~~-~pd~~~~s--K~l~~g~~~ig~v~~~~~-~~-~~~~~~~--~~~---------  276 (400)
T PTZ00125        213 VLLIVDEIQTGLGRTGKLLAHDHEGV-KPDIVLLG--KALSGGLYPISAVLANDD-VM-LVIKPGE--HGS---------  276 (400)
T ss_pred             CEEEEeccccCCCccchhhHHHhcCC-CCCEEEEc--ccccCCCcCcEEEEEcHH-HH-hhccCCC--CCC---------
Confidence            99999999965322111111111223 46877765  9998765 7888877543 22 2221110  000         


Q ss_pred             cccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEecCCCeeEEEEEeecCc
Q 037144          343 QEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD----KRFEVAFPRNFSLVCFRVTPSA  418 (502)
Q Consensus       343 ~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~----~~~~l~~~~~~~~v~f~~~~~~  418 (502)
                              +. .+.+........+++.+..+++   .++..++.+++++.|+++    +.+..+ .+...++.+.+.+..
T Consensus       277 --------t~-~~~~~~~~aa~~~l~~i~~~~~---~~~~~~~~~~l~~~l~~l~~~~~~~~~~-~~~g~~~~v~~~~~~  343 (400)
T PTZ00125        277 --------TY-GGNPLACAVAVEALEVLKEEKL---AENAQRLGEVFRDGLKELLKKSPWVKEI-RGKGLLNAIVFDHSD  343 (400)
T ss_pred             --------CC-CcCHHHHHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHHHhcCCCeEEE-ecccEEEEEEEccCc
Confidence                    00 1111122223334444433333   345556677777777653    222222 233334444443211


Q ss_pred             chhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144          419 VMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEH  498 (502)
Q Consensus       419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~  498 (502)
                                                ......+.+++.++|.. +.+.   +..++|++.+ ...++++|+++++.|.++
T Consensus       344 --------------------------~~~~~~~~~~l~~~Gv~-v~~~---~~~~lRi~~~-~~~~~~~i~~~l~~l~~~  392 (400)
T PTZ00125        344 --------------------------GVNAWDLCLKLKENGLL-AKPT---HDNIIRFAPP-LVITKEQLDQALEIIKKV  392 (400)
T ss_pred             --------------------------chHHHHHHHHHHHCCeE-Eeec---CCCEEEEECC-ccCCHHHHHHHHHHHHHH
Confidence                                      01134567777777864 4332   3468999975 345777999999999987


Q ss_pred             HHh
Q 037144          499 LEA  501 (502)
Q Consensus       499 ~~~  501 (502)
                      +++
T Consensus       393 l~~  395 (400)
T PTZ00125        393 LKS  395 (400)
T ss_pred             HHH
Confidence            764

>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]

Probab=99.69  E-value=4.5e-14  Score=137.45  Aligned_cols=375  Identities=14%  Similarity=0.101  Sum_probs=228.7

Q ss_pred             chhHhhcCCCCC--CCCCCCHHHHHHHHHHhhcCCCCCCCCCcccccCCCCCCHHHHHH-HHHHh-----hcCCCCcccc
Q 037144           38 PGYLKKRLPESA--PYSPESVETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVG-EMLSS-----GFNVVGLDWI  109 (502)
Q Consensus        38 ~~~l~~~~~~~~--p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~l~~-----~~n~~~~~~~  109 (502)
                      |..++.. ...+  +..+.+..+++.++.+....|.   ..+.|.|--.-+...|+++- .++..     .+-+++..-+
T Consensus        40 P~~Ir~~-~~~~~~~~~~~sE~e~l~~l~~ia~kN~---~~~sfiG~GyY~~~~P~vI~rnile~pewyTaYTPYQpEIS  115 (450)
T COG0403          40 PPSIRKK-LDTLLPLPKPLSEYEALAELKEIASKNK---VFTSFIGAGYYDTYTPPVILRNILENPEWYTAYTPYQPEIS  115 (450)
T ss_pred             CHHHHhc-ccccCCCCCCCCHHHHHHHHHHHHhcCc---hhhhhccCcccCCcCcHHHHHHhhcCccccccCCCCchhhh
Confidence            5555543 2222  2235699999999999876665   45677775544555666665 44432     1234443344


Q ss_pred             cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144          110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ  189 (502)
Q Consensus       110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~  189 (502)
                      ++..-.-+|-+  ..+++|.|++-.       +..+--++|.+- .|+..++...       +.++-.++++...|+...
T Consensus       116 QGrLqaLfefQ--tlv~dLTGm~VA-------NASm~DeaTAaA-EAm~ma~r~~-------k~k~~~~~V~~~vhpqt~  178 (450)
T COG0403         116 QGRLEALFEFQ--TLVADLTGLDVA-------NASMLDEATAAA-EAMLMAKRVT-------KKKRNKFLVPKDVHPQTL  178 (450)
T ss_pred             hHHHHHHHHHH--HHHHHHhCCCcc-------cchhhhhHHHHH-HHHHHHHHhh-------cCcCceEEecCCCCHHHH
Confidence            55555556655  779999999864       234444555333 3333332211       013567899999998766


Q ss_pred             HHHH----HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144          190 KAAQ----IVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW  265 (502)
Q Consensus       190 ~aa~----~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~  265 (502)
                      ...+    -+|+   +++.++.+       |.++|+++ ++..     .+.|++..+++.-+.+.++.+|.+.+|++|..
T Consensus       179 ~Vl~Tra~~~g~---~i~~~~~~-------d~~~l~~~-~~~~-----~~gv~vQyP~~~G~~~~d~~~l~~~~h~~~al  242 (450)
T COG0403         179 DVLRTRAEGLGI---EIEVVDAD-------DLDDLESA-DDGD-----VFGVLVQYPNTFGIVEEDLRALIEAAHSAGAL  242 (450)
T ss_pred             HHHHhhcccCce---EEEEeccc-------hhhhhhhc-cccC-----eEEEEEecCCCCCccchhHHHHHHHHhhcCCE
Confidence            5543    3445   66666543       77888887 3211     35788888874444778899999999999998


Q ss_pred             EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCC----CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCc
Q 037144          266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLF----TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPK  341 (502)
Q Consensus       266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~----~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~  341 (502)
                      +.|=+=--+..++-|....      +||.++.+.+-++.    +.+.+|++.+|++.     ....|..+-+...+   .
T Consensus       243 ~~v~aDplaL~LL~pPGe~------GADIvvG~~QrfGvPmgfGGPhag~fA~~~~~-----~R~mPGRlVG~S~D---~  308 (450)
T COG0403         243 VIVAADPLALGLLKPPGEF------GADIVVGSAQRFGVPMGFGGPHAGYFAVKDEF-----KRQMPGRLVGVSVD---A  308 (450)
T ss_pred             EEEEechhHhhccCCcccc------CCceEEecCcccCCCcCCCCcceeeeeEhHhH-----hhcCCCceeeeeec---C
Confidence            7764311111222222222      89999999998641    22348888887653     23456665544333   2


Q ss_pred             ccccCCCcccccC----CCCCCc----------hHHHHH--HHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEecC
Q 037144          342 EQEVGYKDWQITL----CRRFRS----------LKLWVV--IRNFGVANLRNFIRSHVGMAKLFERLVTSDK-RFEVAFP  404 (502)
Q Consensus       342 ~~~~~~~~~~~~~----sr~~~a----------l~~~~~--l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~-~~~l~~~  404 (502)
                      .+...+. +++|.    -||..|          +++.++  +-++|.+|+.++.++.++++.+|.++|++.. |++++..
T Consensus       309 ~G~~A~r-LaLQTREQHIRReKATSNICTnQaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~~  387 (450)
T COG0403         309 AGKRAFR-LALQTREQHIRREKATSNICTNQALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVFD  387 (450)
T ss_pred             CCCchhh-hhHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEeccc
Confidence            2332222 23332    344333          222222  3346999999999999999999999999653 6898877


Q ss_pred             CCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCc
Q 037144          405 RNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTM  484 (502)
Q Consensus       405 ~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~  484 (502)
                      ..+..++++...                             +.+..+.++....|.-.   ..+.. ..+=+|+. -.++
T Consensus       388 ~fFdt~~v~~~~-----------------------------~~~~~l~~~~~~~G~~L---~~~~~-~~~~ia~t-Et~t  433 (450)
T COG0403         388 HFFDTFTVRVPE-----------------------------EVAEALLAAAIAGGINL---RRVDA-DTVLIALT-ETTT  433 (450)
T ss_pred             cceeeEEEecch-----------------------------hHHHHHHHHHHhcCCce---eeecC-CceEEEee-cccC
Confidence            777788887742                             22456666665666421   11111 14566765 4466


Q ss_pred             HHHHHHHHHHHHHH
Q 037144          485 ESHVRAAWTVVQEH  498 (502)
Q Consensus       485 ~~di~~~~~~l~~~  498 (502)
                      ++||+.+++.+...
T Consensus       434 ~~~i~~l~~~~~~~  447 (450)
T COG0403         434 KEDIDALVAAFGGV  447 (450)
T ss_pred             HHHHHHHHHHHhhh
Confidence            77999999988764

>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase

Probab=99.69  E-value=8.8e-15  Score=150.59  Aligned_cols=239  Identities=13%  Similarity=0.129  Sum_probs=154.9

Q ss_pred             cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh--
Q 037144          110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA--  187 (502)
Q Consensus       110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s--  187 (502)
                      ..|...++|    +.+++++|.+         ..+++++|+.|+..++.+...           +++.|+++...|..  
T Consensus        55 ~~p~~~~le----~~lA~l~g~~---------~~v~~~sG~~Ai~~al~~l~~-----------~Gd~Vl~~~~~y~~t~  110 (418)
T TIGR01326        55 MNPTTDVLE----QRIAALEGGV---------AALAVASGQAAITYAILNLAQ-----------AGDNIVSSSYLYGGTY  110 (418)
T ss_pred             CChhHHHHH----HHHHHHhCCC---------eEEEEccHHHHHHHHHHHHhC-----------CCCEEEEECCCcHHHH
Confidence            444444444    5578888864         368999999999888776543           56677777776643  


Q ss_pred             --HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144          188 --FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW  265 (502)
Q Consensus       188 --~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~  265 (502)
                        +...+...|+   +++.++.+       |+++|++++++++      .+|++..++|++|.+.|+++|+++|+++|++
T Consensus       111 ~~~~~~~~~~G~---~v~~v~~~-------d~~~l~~~l~~~t------~~V~le~p~NPtg~v~dl~~I~~la~~~~i~  174 (418)
T TIGR01326       111 NLFKHTLKRLGI---EVRFVDPD-------DPEEFEKAIDENT------KAVFAETIGNPAINVPDIEAIAEVAHAHGVP  174 (418)
T ss_pred             HHHHHHHHHcCc---EEEEECCC-------CHHHHHHhcCcCC------eEEEEECCCCCCCeecCHHHHHHHHHHcCCE
Confidence              3455677898   88888742       7899999886543      3788889999999999999999999999999


Q ss_pred             EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccc
Q 037144          266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQE  344 (502)
Q Consensus       266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~  344 (502)
                      ++||++|+.+....+ ..      .++|.++.+++|+++++ ...|.+++....... ..... ..+......   +...
T Consensus       175 livD~t~~~~~~~~~-l~------~g~Divv~S~sK~l~g~G~~lGg~v~~~~~~~~-~~~~~-~~~~~~~~~---q~a~  242 (418)
T TIGR01326       175 LIVDNTFATPYLCRP-ID------HGADIVVHSATKYIGGHGTAIGGVIVDGGKFDW-ANGRF-PLFTTPDPS---YHGL  242 (418)
T ss_pred             EEEECCCchhhcCCc-hh------cCCeEEEECccccccCCccceEEEEEecccccc-ccccc-ccccCCCCc---cccc
Confidence            999999976533222 11      26899999999999864 336666665432111 00000 000000000   0000


Q ss_pred             -cCC-----------C-cccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144          345 -VGY-----------K-DWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA  402 (502)
Q Consensus       345 -~~~-----------~-~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~  402 (502)
                       ...           . .+.-..+-...+...|..++  |.+.+..++++..+++..+.+.|.+.|++..+
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~~~~~--~l~tl~~R~~~~~~~a~~la~~L~~~~~V~~V  311 (418)
T TIGR01326       243 VFTETFGNPAFIVKARVQLLRDLGAALSPFNAFLLLQ--GLETLSLRMERHVENALKVAEFLEAHPKVAWV  311 (418)
T ss_pred             hhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHHC--CcccHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence             000           0 00000111223445565544  55677788888889999999999999998755

This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.

>PRK07505 hypothetical protein; Provisional

Probab=99.69  E-value=2.5e-14  Score=147.01  Aligned_cols=300  Identities=9%  Similarity=0.056  Sum_probs=170.2

Q ss_pred             hHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHH
Q 037144          114 AVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQ  193 (502)
Q Consensus       114 ~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~  193 (502)
                      ..+...++.+.+++++|. .         .+++++|++|+..++..++.....     +.++.+|+.+...|.|+.....
T Consensus        89 ~~~~~~~l~~~la~~~~~-~---------~~~~~sG~~a~~~ai~~~~~~~~~-----~~~~~vi~~~~~~H~s~~~~~~  153 (402)
T PRK07505         89 RSQILKDLEEALSELFGA-S---------VLTFTSCSAAHLGILPLLASGHLT-----GGVPPHMVFDKNAHASLNILKG  153 (402)
T ss_pred             hhHHHHHHHHHHHHHhCC-C---------EEEECChHHHHHHHHHHHHhcccC-----CCCCCEEEEchhhhHhHHhhhh
Confidence            355666788889999886 2         355567788998888766532111     0133466777788988753222


Q ss_pred             --HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecc
Q 037144          194 --IVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAA  271 (502)
Q Consensus       194 --~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA  271 (502)
                        ..+.   +++.+|.       .|+++|++++++.+      .+++++.+.+++|.+.|+++|.++|++||+++++|++
T Consensus       154 ~~~~~~---~v~~~~~-------~d~~~l~~~~~~~~------~~~vl~~p~~~~G~~~~~~~i~~l~~~~~~~li~DEa  217 (402)
T PRK07505        154 ICADET---EVETIDH-------NDLDALEDICKTNK------TVAYVADGVYSMGGIAPVKELLRLQEKYGLFLYIDDA  217 (402)
T ss_pred             hhhcCC---eEEEeCC-------CCHHHHHHHHhcCC------CEEEEEecccccCCcCCHHHHHHHHHHcCCEEEEECc
Confidence              2333   7777775       38899999886432      3677778889999999999999999999999999999


Q ss_pred             cccccc-c-Cccch-hhhcC-CCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcC-CcccccCccCCCCCcccccC
Q 037144          272 YAGSAC-I-CPEFR-HFIDG-VECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLST-NPQYLKNEATDQEPKEQEVG  346 (502)
Q Consensus       272 ~g~~~~-~-~~~~~-~~~~~-~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~  346 (502)
                      |+...+ . ...+. ..+.. ......++.++.|.++.+  .|++++.++... +.+.. ...|.+              
T Consensus       218 ~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~--Gg~~~~~~~~~~-~~~~~~~~~~t~--------------  280 (402)
T PRK07505        218 HGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGAS--GGVIMLGDAEQI-ELILRYAGPLAF--------------  280 (402)
T ss_pred             ccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhcc--CeEEEeCCHHHH-HHHHHhCCCcee--------------
Confidence            843211 1 11111 11111 123345566889998755  355554454433 22221 112211              


Q ss_pred             CCcccccCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhh
Q 037144          347 YKDWQITLCRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRT  425 (502)
Q Consensus       347 ~~~~~~~~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~  425 (502)
                            ..+.. .....+.+++..+..+.+.++.++..++.+.+...+...     .....+.+..+.. +.        
T Consensus       281 ------~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~g~~~~i~~~~~-~~--------  340 (402)
T PRK07505        281 ------SQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSLIPTE-----QSGSFLPIRLIYI-GD--------  340 (402)
T ss_pred             ------CCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhc-----CCCCCCCEEEEEe-CC--------
Confidence                  11111 122233344444444455555444444444443322111     0111122222222 11        


Q ss_pred             cccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeee---ECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          426 KYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAI---VGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       426 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~---~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                                         .....++.++|.++|.++.....   ..+..+||+++. ...++++++++++.|+++.++
T Consensus       341 -------------------~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~lRi~~~-~~~t~eei~~~~~~l~~~l~~  399 (402)
T PRK07505        341 -------------------EDTAIKAAKQLLDRGFYTSPVFFPVVAKGRAGLRIMFR-ASHTNDEIKRLCSLLKEILDE  399 (402)
T ss_pred             -------------------HHHHHHHHHHHHHCCCeEeeecCCCCCCCCceEEEecC-ccCCHHHHHHHHHHHHHHHHh
Confidence                               11235678888888976443211   113368999986 445667999999999987653

>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.69  E-value=9.8e-15  Score=149.11  Aligned_cols=242  Identities=13%  Similarity=0.130  Sum_probs=161.0

Q ss_pred             cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144          110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ  189 (502)
Q Consensus       110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~  189 (502)
                      .+|....+|+.    ++++.|..         .++.++||+.|+.+++.+...           +++.|+++...|.+..
T Consensus        59 ~nPtv~~lE~~----la~leg~~---------~av~~~SG~aAi~~al~all~-----------~GD~VI~~~~~Y~~T~  114 (432)
T PRK06702         59 GNPTLAAFEQK----LAELEGGV---------GAVATASGQAAIMLAVLNICS-----------SGDHLLCSSTVYGGTF  114 (432)
T ss_pred             CCcHHHHHHHH----HHHHhCCC---------cEEEECCHHHHHHHHHHHhcC-----------CCCEEEECCCchHHHH
Confidence            46777777766    56776654         368899999999888876532           6788999998886544


Q ss_pred             HH----HHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144          190 KA----AQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW  265 (502)
Q Consensus       190 ~a----a~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~  265 (502)
                      ..    +..+|+   +++.+..      .+|+++|+++|+++++      +|++..++++++.+-|+++|+++|+++|++
T Consensus       115 ~~~~~~l~~~Gi---~v~~vd~------~~d~~~l~~~I~~~Tk------~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~  179 (432)
T PRK06702        115 NLFGVSLRKLGI---DVTFFNP------NLTADEIVALANDKTK------LVYAESLGNPAMNVLNFKEFSDAAKELEVP  179 (432)
T ss_pred             HHHHHHHHHCCC---EEEEECC------CCCHHHHHHhCCcCCe------EEEEEcCCCccccccCHHHHHHHHHHcCCE
Confidence            44    577888   8888843      4799999999987654      777888999999999999999999999999


Q ss_pred             EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc-ceEEEeeCch--hhh----hhhcCCcccccCccCCC
Q 037144          266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD-CCCLWVKDPS--CLL----STLSTNPQYLKNEATDQ  338 (502)
Q Consensus       266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~-~g~~~~r~~~--~l~----~~~~~~~~yl~~~~~~~  338 (502)
                      +++|.+++...+.-| ...      +||.++-+..||+++..+ .|.+.+....  +..    ........+....... 
T Consensus       180 livD~T~~tP~~~~p-l~~------GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~-  251 (432)
T PRK06702        180 FIVDNTLATPYLCQA-FEH------GANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQ-  251 (432)
T ss_pred             EEEECCCCchhhCCh-hhc------CCCEEEEccccccCCCcceeceEEEeCCCcccccccccccccccccccccchhh-
Confidence            999999965433222 222      899999999999976533 3333332111  000    0000000000000000 


Q ss_pred             CCcccccC-----CCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144          339 EPKEQEVG-----YKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA  402 (502)
Q Consensus       339 ~~~~~~~~-----~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~  402 (502)
                        ..+...     ...+....+-...++..|..++.  .+.+..++++..+++..+.+.|++.|.++-+
T Consensus       252 --~~~~~~~~~~~~~~~~~~~g~~~sp~~a~l~~rg--L~Tl~lR~~r~~~Na~~la~~L~~~p~V~~V  316 (432)
T PRK06702        252 --NFGAAAYIVKARVQLLRDYGNCMSPFNAYISNIG--LETLHLRMERHSENALAVAKWLADHERIEWV  316 (432)
T ss_pred             --ccchhhHHHHHHHHHHHHccCCCCHHHHHHHHhc--cCcHHHHHHHHHHHHHHHHHHHHhCCCcceE
Confidence              000000     00001112224456777777764  4678899999999999999999999988754

>PRK06434 cystathionine gamma-lyase; Validated

Probab=99.68  E-value=6.6e-15  Score=148.72  Aligned_cols=232  Identities=15%  Similarity=0.160  Sum_probs=157.4

Q ss_pred             cccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCc--
Q 037144          108 WISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTH--  185 (502)
Q Consensus       108 ~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H--  185 (502)
                      ...+|...++|+.    ++++.|.+         ..+.+++|+.|+..++.+...           +++.|+++...+  
T Consensus        60 r~~~P~~~~lE~~----la~leg~~---------~av~~sSG~aAi~~al~all~-----------~GD~Vl~~~~~yg~  115 (384)
T PRK06434         60 RWGNPTVQAFEEK----YAVLENAE---------HALSFSSGMGAITSAILSLIK-----------KGKRILSISDLYGQ  115 (384)
T ss_pred             CCCChhHHHHHHH----HHHHhCCC---------cEEEeCCHHHHHHHHHHHHhC-----------CCCEEEEecCccch
Confidence            3467777888877    66777764         368888889888777765422           677788775532  


Q ss_pred             -h-hHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhC
Q 037144          186 -C-AFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFG  263 (502)
Q Consensus       186 -~-s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g  263 (502)
                       + .+...+...|+   +++.+++++.+++.+++         .     .+.+|....++|+++.+.|+++|+++|++++
T Consensus       116 t~~~~~~~~~~~Gi---~v~fvd~~~~~~~~l~~---------~-----~tklv~~e~~snpt~~v~Di~~I~~la~~~~  178 (384)
T PRK06434        116 TFYFFNKVLKTLGI---HVDYIDTDRLNSLDFDP---------S-----NYDLIYAESITNPTLKVPDIKNVSSFCHEND  178 (384)
T ss_pred             HHHHHHHHHHhcCc---EEEEECCCChhheeecC---------C-----CeeEEEEEcCCCCCceeecHHHHHHHHHHcC
Confidence             2 23356777899   99999986423233222         1     1347888999999999999999999999998


Q ss_pred             CEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCc
Q 037144          264 IWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPK  341 (502)
Q Consensus       264 ~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~  341 (502)
                        ++||++++.....-| ..      .++|.+++|+||+++++.+  .|+++++++........    +...        
T Consensus       179 --lvVD~t~~s~~~~~p-l~------~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~----~~~~--------  237 (384)
T PRK06434        179 --VIVDATFASPYNQNP-LD------LGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVE----RRKT--------  237 (384)
T ss_pred             --eEEECCCCCcccCCc-hh------cCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHH----HHHh--------
Confidence              567999866543222 21      2799999999999988765  56665655543221110    0000        


Q ss_pred             ccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-----------CeeEE
Q 037144          342 EQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR-----------NFSLV  410 (502)
Q Consensus       342 ~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~-----------~~~~v  410 (502)
                                  .+.....+.+|..++  |.+.+..++++..+++..+.+.|+++|.++-+.-|           ..+++
T Consensus       238 ------------~G~~~~~~~A~l~~~--gL~tL~~R~~r~~~~a~~~a~~L~~~p~v~~V~yPgl~~~~~~~~g~g~~~  303 (384)
T PRK06434        238 ------------LGSNPDPIQAYLALR--GLKTLGLRMEKHNKNGMELARFLRDSKKISNVYYPDTEIGKKVLRGFGGML  303 (384)
T ss_pred             ------------cCCCCCHHHHHHHHh--CCCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCChHHHHHhcCCCCceE
Confidence                        011124455565554  56788999999999999999999999988643222           24578


Q ss_pred             EEEee
Q 037144          411 CFRVT  415 (502)
Q Consensus       411 ~f~~~  415 (502)
                      +|.+.
T Consensus       304 sf~l~  308 (384)
T PRK06434        304 SFELR  308 (384)
T ss_pred             EEEEC
Confidence            88874

>TIGR00474 selA seryl-tRNA(sec) selenium transferase

Probab=99.68  E-value=3.9e-14  Score=145.61  Aligned_cols=163  Identities=15%  Similarity=0.116  Sum_probs=115.5

Q ss_pred             HHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCch------hHHHH
Q 037144          118 ENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHC------AFQKA  191 (502)
Q Consensus       118 e~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~------s~~~a  191 (502)
                      ...+.+.+++++|.+.         .+++++|+.|+..++.+ ..           +++.|++|+..|.      ++...
T Consensus       124 ~~~le~~lA~l~gae~---------alvv~sg~aAi~l~l~~-l~-----------~GdeVIvs~~e~v~~ggs~~i~~~  182 (454)
T TIGR00474       124 YSHVEGLLCELTGAED---------ALVVNNNAAAVLLALNT-LA-----------KGKEVIVSRGELVEIGGSFRIPDV  182 (454)
T ss_pred             HHHHHHHHHHHhCCCc---------EEEECCHHHHHHHHHHH-hC-----------CcCEEEECCChhhhhcchhhHHHH
Confidence            3457788999999864         46677888888766633 21           5678888876652      34456


Q ss_pred             HHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcc--cc--ccCChhHHHHHHHHhCCEEE
Q 037144          192 AQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTA--IT--AVDPLKPLCDVAKQFGIWVH  267 (502)
Q Consensus       192 a~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~--~G--~idpl~eI~~i~~~~g~~lh  267 (502)
                      ++..|+   +++.++++.    ..|+++++++|+++++      +|+.++.+|.  .|  .+-|+++|+++|++||++++
T Consensus       183 ~~~~G~---~~~~v~~~~----~~~l~dle~aI~~~T~------lv~~~h~sN~~~~G~~~~~dl~~I~~la~~~g~~vi  249 (454)
T TIGR00474       183 MEQSGA---KLVEVGTTN----RTHLKDYEDAITENTA------LLLKVHTSNYRIVGFTEEVSIAELVALGREHGLPVM  249 (454)
T ss_pred             HHHcCC---EEEEeCCCC----CCCHHHHHHhcCcCCE------EEEEEccCcccccCCCCCCCHHHHHHHHHHcCCeEE
Confidence            677898   899887642    4689999999977654      6777777765  46  47899999999999999999


Q ss_pred             eeccccccc----c---cCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCc
Q 037144          268 VDAAYAGSA----C---ICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDP  317 (502)
Q Consensus       268 VDaA~g~~~----~---~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~  317 (502)
                      ||++.|...    +   ..|......  -.++|.+++++|||+++|. +|+++.++.
T Consensus       250 vD~~sG~l~~~~~~gl~~~p~~~~~~--~~GaDiv~fSg~K~LgGp~-~G~i~g~~~  303 (454)
T TIGR00474       250 EDLGSGSLVDLSRYGLPDEPTVQEVI--AAGVDLVTFSGDKLLGGPQ-AGIIVGKKE  303 (454)
T ss_pred             EECCCcccccchhccCCCCcccccHh--HcCCCEEEecCccccCCCe-EEEEEECHH
Confidence            998643320    0   011111111  1279999999999999884 788877643

In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.

>PLN02397 aspartate transaminase

Probab=99.68  E-value=4.9e-14  Score=145.52  Aligned_cols=323  Identities=11%  Similarity=0.056  Sum_probs=194.4

Q ss_pred             HHHHHHHhhcCCC-CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcE--EEcCCc--hHHHHHHHHHHHHHHHH
Q 037144           92 IVGEMLSSGFNVV-GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGG--VIQGTT--CEALLCTLTAARDRVLK  166 (502)
Q Consensus        92 ~~~~~l~~~~n~~-~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g--~~t~gg--t~a~~~al~~a~~~~~~  166 (502)
                      .+.+.+...++.+ ...|....+..++.+.+.+|+.+..+.+...     ...  .-+.+|  +.+++.++....+    
T Consensus        70 ~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~~~~~~~-----~~i~~~~i~~g~Ga~~l~~~~~~~~~----  140 (423)
T PLN02397         70 VVRKAEQRLLAGSRNKEYLPIEGLAEFNKLSAKLAYGADSPAIKE-----NRVATVQCLSGTGSLRLGAEFLARFY----  140 (423)
T ss_pred             HHHHHHHHhhccCCCCCCCCcCCCHHHHHHHHHHHcCCCCchhhc-----CeeEeeecccchHHHHHHHHHHHHhC----
Confidence            3444443333333 3368888888999999999986553322100     011  112233  3334333333222    


Q ss_pred             HhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccc
Q 037144          167 KIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAI  246 (502)
Q Consensus       167 ~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~  246 (502)
                             +++.|+++++++..+...++..|+   +++.+|+...+++.+|++.+++.+.+..   .+..+++.+.++|+|
T Consensus       141 -------pGd~Vlv~~P~y~~y~~~~~~~g~---~~~~v~l~~~~~~~~d~~~l~~~l~~~~---~~~~~i~~~~P~NPT  207 (423)
T PLN02397        141 -------PGSTIYIPNPTWGNHHNIFRDAGV---PVRTYRYYDPKTRGLDFDGLLEDLKAAP---DGSFVLLHACAHNPT  207 (423)
T ss_pred             -------CCCEEEEeCCCchhHHHHHHHcCC---eEEEeecccCcCCccCHHHHHHHHHhCC---CCCEEEEeCCCCCCC
Confidence                   678899999999999999999999   9999998422247899999998886431   124678888899999


Q ss_pred             ccc---CChhHHHHHHHHhCCEEEeecccccccccCc--cchhh--hcCCCCCCee-EEccCCcCC-CCCcceEEE--ee
Q 037144          247 TAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICP--EFRHF--IDGVECVDSF-SFNPHKWLF-TTLDCCCLW--VK  315 (502)
Q Consensus       247 G~i---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~--~~~~~--~~~~~~aDsi-~~~~hK~l~-~p~~~g~~~--~r  315 (502)
                      |.+   +.+++|+++|++||+|+++|.+|........  .....  +... .-.+| ..++.|.++ ....+|+++  ..
T Consensus       208 G~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~-~~~vI~~~SfSK~~~~~G~RvG~~v~~~~  286 (423)
T PLN02397        208 GVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVED-GHEILVAQSYAKNMGLYGERVGALSVVCK  286 (423)
T ss_pred             CCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhc-CCcEEEEEECcccCCCccccceEEEEEeC
Confidence            999   4577888999999999999999987654210  01111  1111 11244 457999998 467788875  33


Q ss_pred             CchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcH-----H---HHHHHHHHHHHHHH
Q 037144          316 DPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGV-----A---NLRNFIRSHVGMAK  387 (502)
Q Consensus       316 ~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~-----~---g~~~~~~~~~~la~  387 (502)
                      ++..+.........+.....                 .+   ...+..+++...+..     +   .+++..++..++++
T Consensus       287 ~~~~~~~~~~~~~~~~~~~~-----------------~~---~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~  346 (423)
T PLN02397        287 SADVAVRVKSQLKLIARPMY-----------------SN---PPIHGASIVATILGDPELFSEWTKELKGMADRIISMRQ  346 (423)
T ss_pred             CHHHHHHHHHHHHHHHhccc-----------------CC---CcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            33322111100000000000                 00   012233333333321     2   25677788899999


Q ss_pred             HHHHHHhcCCC----eEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEE
Q 037144          388 LFERLVTSDKR----FEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFM  463 (502)
Q Consensus       388 ~l~~~l~~~~~----~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~  463 (502)
                      .+.+.|+++ +    ++++ .|+.++++|.-.+                            .    +++++|.++..+++
T Consensus       347 ~l~~~L~~~-~~~~~~~~~-~p~gg~fl~~~l~----------------------------~----~~~~~Ll~~~~V~v  392 (423)
T PLN02397        347 KLYDALEAR-GSPGDWSHI-TKQIGMFSFTGLN----------------------------K----EQVDRMTKEYHIYM  392 (423)
T ss_pred             HHHHHHHhc-CCCCCCCcc-cCCceEEEecCCC----------------------------H----HHHHHHHHhCCEEE
Confidence            999999987 5    6654 4666776664221                            1    24555555444444


Q ss_pred             EeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144          464 THAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       464 ~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~  500 (502)
                      .+   ++    |+++++  .++++|++++++|+++.+
T Consensus       393 ~~---~~----Ri~~~~--~~~~~i~~~~~~i~~~~~  420 (423)
T PLN02397        393 TR---DG----RISMAG--LSSKNVPYLADAIHAVVT  420 (423)
T ss_pred             CC---CC----eEEEee--CCHHHHHHHHHHHHHHHh
Confidence            32   22    999865  466799999999998764

>PRK03967 histidinol-phosphate aminotransferase; Provisional

Probab=99.67  E-value=7.2e-14  Score=140.15  Aligned_cols=283  Identities=11%  Similarity=0.075  Sum_probs=174.6

Q ss_pred             cccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCc
Q 037144          106 LDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTH  185 (502)
Q Consensus       106 ~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H  185 (502)
                      ..|. .++...+++.    +++.+|++.+       ..++|+|+++++...+.+.             +++.|+++.+.|
T Consensus        50 ~~Y~-~~g~~~lr~~----ia~~~~~~~~-------~I~~t~G~~~~l~~~~~~~-------------~gd~V~v~~P~y  104 (337)
T PRK03967         50 NRYP-HITSDPLREA----IAEFYGLDAE-------NIAVGNGSDELISYLVKLF-------------EGKHIVITPPTF  104 (337)
T ss_pred             ccCC-CCCHHHHHHH----HHHHhCcCcc-------eEEEcCCHHHHHHHHHHHh-------------CCCeEEEeCCCh
Confidence            3453 2344555554    5555566554       5889999998875433211             356788888888


Q ss_pred             hhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144          186 CAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW  265 (502)
Q Consensus       186 ~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~  265 (502)
                      ..+..+++..|+   +++.++++.  ++.+|++.|++++. .+      .+|+++.++|+||.+-+.++|.++++ ++++
T Consensus       105 ~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~~~-~~------~~v~~~~P~NPtG~~~~~~~l~~i~~-~~~~  171 (337)
T PRK03967        105 GMYSFYAKLNGI---PVIDVPLKE--DFTIDGERIAEKAK-NA------SAVFICSPNNPTGNLQPEEEILKVLE-TGKP  171 (337)
T ss_pred             HHHHHHHHHcCC---eEEEeecCC--CCCcCHHHHHHhcc-CC------CEEEEeCCCCCCCCCCCHHHHHHHHh-cCCE
Confidence            888888899999   999999874  47899999987642 12      25667899999999999999999995 7999


Q ss_pred             EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccc
Q 037144          266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQE  344 (502)
Q Consensus       266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~  344 (502)
                      +++|.+|..+.-  ..........++ -.+..++.|.++ ....+|+++.. +.... .+......              
T Consensus       172 ii~De~y~~~~~--~~~~~~~~~~~~-vi~l~S~SK~~~l~GlRiG~iv~~-~~~i~-~~~~~~~~--------------  232 (337)
T PRK03967        172 VVLDEAYAEFSG--KSLIGLIDEYPN-LILLRTFSKAFGLAGIRAGYAIAN-EEIID-ALYRIKPP--------------  232 (337)
T ss_pred             EEEECchhhhcc--cchHHHHhhCCC-EEEEecchHhhcchhhhheeeecC-HHHHH-HHHhhcCC--------------
Confidence            999999976431  111111111111 144567999998 55677888763 33322 22111100              


Q ss_pred             cCCCcccccCCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhh
Q 037144          345 VGYKDWQITLCRRFRSLKLWVVIRNF-GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKL  423 (502)
Q Consensus       345 ~~~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~  423 (502)
                           ++      ..++...++...+ ..+.+.+.+++..+.++.+.+.|.+.     ..++..+.+++.+         
T Consensus       233 -----~~------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-----~~~~~~~~~~~~~---------  287 (337)
T PRK03967        233 -----FS------LNILTMKIVRLALDHYDLIEERIDYIIKERERVRRELGEY-----AYPSDANFLLLKL---------  287 (337)
T ss_pred             -----CC------CCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhccC-----cCCCCCcEEEEhH---------
Confidence                 00      0223333333333 23455555666667777787777654     1233333333211         


Q ss_pred             hhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          424 RTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                                                .+.+.+.++|..+... ......++|++++    +.++.++++++|+++.+.
T Consensus       288 --------------------------~~~~~l~~~gi~v~~~-~~~~~~~~Ri~~~----~~~~~~~l~~~l~~~~~~  334 (337)
T PRK03967        288 --------------------------DAYDYLLENGIVVRKL-SGRLEGHIRVTVG----KREENDEFIKALKEIKEG  334 (337)
T ss_pred             --------------------------HHHHHHHHCCEEEEeC-CCCCCCeEEEecC----CHHHHHHHHHHHHHHHHh
Confidence                                      1456666778544332 2233568999986    445888999998887654

>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase

Probab=99.67  E-value=1.1e-13  Score=139.40  Aligned_cols=320  Identities=13%  Similarity=0.120  Sum_probs=190.6

Q ss_pred             cccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCc
Q 037144          106 LDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTH  185 (502)
Q Consensus       106 ~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H  185 (502)
                      ..|..+|...++|+.    +++++|++.         ++.|++||.|......+...           ++++|  +...|
T Consensus        65 e~yag~~s~~~lE~~----va~~~G~~~---------av~v~sGT~Al~ll~~l~l~-----------pGDeV--psn~~  118 (450)
T TIGR02618        65 EAYAGSRNFYHLERT----VRELYGFKY---------VVPTHQGRGAENLLSQIAIK-----------PGDYV--PGNMY  118 (450)
T ss_pred             hhhcCCCcHHHHHHH----HHHHHCCCe---------EEEcCCHHHHHHHHHHhCCC-----------CcCEE--CCcee
Confidence            358899999999987    567778763         78999999995543211111           56665  55788


Q ss_pred             hhHHHH-HHHcCCCCCCEEEEecCC--------CCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccc-ccc---CCh
Q 037144          186 CAFQKA-AQIVGIDRKNIRAIKTTK--------SSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAI-TAV---DPL  252 (502)
Q Consensus       186 ~s~~~a-a~~~Glg~~~v~~v~~~~--------~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~-G~i---dpl  252 (502)
                      ++-.++ +...|.   .++-++.++        ..+|.||+++|+++|++... ...+ +|+++..++.. |..   +++
T Consensus       119 f~Tt~ahIe~~Ga---v~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~-~~~~-lV~~e~t~N~~GG~pvs~~~l  193 (450)
T TIGR02618       119 FTTTRYHQEKNGA---TFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGA-DKIP-YICLAVTVNLAGGQPVSMANM  193 (450)
T ss_pred             HHHHHHHHHhCCe---EEEeeecccccccccCCCCCCCcCHHHHHHHhccccC-cccC-ceEEEEecccCCCeeCCHHHH
Confidence            766666 677787   666664431        23579999999999985321 1223 45555555555 666   678


Q ss_pred             hHHHHHHHHhCCEEEeecccccc-cccCc----cch-----hhhc-CCCCCCeeEEccCCcCCCCCcceEEEeeCchhhh
Q 037144          253 KPLCDVAKQFGIWVHVDAAYAGS-ACICP----EFR-----HFID-GVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLL  321 (502)
Q Consensus       253 ~eI~~i~~~~g~~lhVDaA~g~~-~~~~~----~~~-----~~~~-~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~  321 (502)
                      ++|.++|++||+++|.|||+... ++++.    .+.     .... -.+.+|++++++||.+++|. .|++++++++...
T Consensus       194 ~~I~elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~~-GG~l~~~d~~l~~  272 (450)
T TIGR02618       194 REVRELCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVNI-GGFLCMNDDEMFQ  272 (450)
T ss_pred             HHHHHHHHHcCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCCC-ceEEEeCCHHHHH
Confidence            99999999999999999998663 33221    111     1011 13479999999999999996 4566668876654


Q ss_pred             hhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 037144          322 STLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEV  401 (502)
Q Consensus       322 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l  401 (502)
                      .+-.....| ..          .   ..++.-.+|...  ++..+++..-   -+...++....+++|.+.|.+. |+.+
T Consensus       273 k~r~~~~~~-eG----------~---~tyGgla~r~~~--ala~gL~e~~---~~~y~~~r~~~a~~La~~L~~~-Gvpv  332 (450)
T TIGR02618       273 SAKELVVVF-EG----------M---PSYGGLAGRDME--AMAIGIREAV---DYEYIEHRVKQVRYLGDKLKAA-GVPI  332 (450)
T ss_pred             HHHHHhhhc-CC----------c---cccCchhhhhHH--HHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHHC-CCcc
Confidence            432222222 10          0   001100111111  1122232211   1245666777899999999998 8999


Q ss_pred             ecCCCeeEEEEEeec--CcchhhhhhcccCCCcccccccchhHhhHHH-HHHHHHHHH-hcCcEEEEeeeE---------
Q 037144          402 AFPRNFSLVCFRVTP--SAVMDKLRTKYKNGTYDQYRQFSEEERTNEF-NRELLESIN-VSGKVFMTHAIV---------  468 (502)
Q Consensus       402 ~~~~~~~~v~f~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~l~-~~g~~~~~~~~~---------  468 (502)
                      +.|+..+.|.+....  +.+                    ..   .++ ...|.-+|. +.|.=-+--+.+         
T Consensus       333 ~~p~ggh~V~vda~~~lph~--------------------~~---~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~  389 (450)
T TIGR02618       333 VEPVGGHAVFLDARRFLPHI--------------------PQ---DQFPAQSLAASIYVETGVRSMERGIVSAGRNNVTG  389 (450)
T ss_pred             cCCCCcceEEEEhHHhCCCC--------------------Ch---hhChHHHHHHHHHHHhCccEEeecceecccCCCCC
Confidence            877777777665432  110                    00   011 223333332 234311111111         


Q ss_pred             ----CCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144          469 ----GGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       469 ----~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~  500 (502)
                          ..-..+|+++---.-|.+++|...+.|..+.+
T Consensus       390 ~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~  425 (450)
T TIGR02618       390 EHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKLYK  425 (450)
T ss_pred             cccCCccceeeeccccccccHhHHHHHHHHHHHHHh
Confidence                01257999985444466799999999988765

This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)

>PRK14808 histidinol-phosphate aminotransferase; Provisional

Probab=99.67  E-value=5.4e-14  Score=140.83  Aligned_cols=298  Identities=9%  Similarity=0.034  Sum_probs=186.1

Q ss_pred             HHHHHHHHHhhcCCCC-cccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHh
Q 037144           90 AGIVGEMLSSGFNVVG-LDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKI  168 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~~-~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~  168 (502)
                      |..+.+.+...+.... ..|. .+...++.+.+.+|+.+.. ++++       ..++|+|+++++..++.+.        
T Consensus        34 p~~~~~~~~~~~~~~~~~~Y~-~~~~~~Lr~aia~~~~~~~-~~~~-------~i~it~Ga~~~i~~~~~~~--------   96 (335)
T PRK14808         34 PEDLVDEVFRRLNSDTLRIYY-DSPDEELIEKILSYLDTDF-LSKN-------NVSVGNGADEIIYVMMLMF--------   96 (335)
T ss_pred             CHHHHHHHHHHhhhhhhhcCC-CCChHHHHHHHHHHhCCCC-CCcc-------eEEEcCCHHHHHHHHHHHh--------
Confidence            3344454444443221 1232 3456677777777766542 5443       6899999999887665432        


Q ss_pred             CccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144          169 GRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA  248 (502)
Q Consensus       169 ~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~  248 (502)
                             +.|++.+++|..+..+++..|+   +++.+|++.  ++.++...    +. .      ..+|+++.++|+||.
T Consensus        97 -------d~v~v~~P~y~~~~~~~~~~g~---~~~~v~~~~--~~~~~~~~----~~-~------~~~i~i~nP~NPTG~  153 (335)
T PRK14808         97 -------DRSVFFPPTYSCYRIFAKAVGA---KFLEVPLTK--DLRIPEVN----VG-E------GDVVFIPNPNNPTGH  153 (335)
T ss_pred             -------CcEEECCCCHHHHHHHHHHcCC---eEEEecCCC--cCCCChhH----cc-C------CCEEEEeCCCCCCCC
Confidence                   1266778899999999999999   999999875  35555332    11 1      237888999999999


Q ss_pred             cCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCC
Q 037144          249 VDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTN  327 (502)
Q Consensus       249 idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~  327 (502)
                      +-+.+++.+++ ++++|+++|.+|..+.  .......+...++ -.++.++.|.++ ....+|+++.. +.... .+...
T Consensus       154 ~~s~~~l~~l~-~~~~~ii~DE~Y~~f~--~~~~~~~~~~~~~-vi~~~S~SK~~~l~GlRvG~~v~~-~~~~~-~l~~~  227 (335)
T PRK14808        154 VFEREEIERIL-KTGAFVALDEAYYEFH--GESYVDLLKKYEN-LAVIRTFSKAFSLAAQRIGYVVSS-EKFID-AYNRV  227 (335)
T ss_pred             CcCHHHHHHHH-hcCCEEEEECchhhhc--CCchHHHHHhCCC-EEEEEechhhccCcccceEEEEeC-HHHHH-HHHHh
Confidence            99999999998 5899999999997642  1111111221111 145567999998 55677888764 33332 22111


Q ss_pred             cccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCC
Q 037144          328 PQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF-GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRN  406 (502)
Q Consensus       328 ~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~  406 (502)
                      ....                   +      ...+..+++...+ ..+.+.+..+...+.++++.+.|++. |+++. +++
T Consensus       228 ~~~~-------------------~------~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~-~~~  280 (335)
T PRK14808        228 RLPF-------------------N------VSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREM-GYRIT-DSR  280 (335)
T ss_pred             cCCC-------------------C------CCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEC-CCC
Confidence            1000                   0      0112222222222 23445666677777788899999887 78765 567


Q ss_pred             eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHH
Q 037144          407 FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMES  486 (502)
Q Consensus       407 ~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~  486 (502)
                      .+++.+++...                           +  ..++.+.+.++|..+..   +  ..++|++++    +.+
T Consensus       281 g~f~~~~l~~~---------------------------~--~~~~~~~l~~~Gi~V~~---~--~~~~Risi~----~~~  322 (335)
T PRK14808        281 GNFVFIFMEKE---------------------------E--KERLLEHLRAKNIAVRS---F--REGVRITIG----KRE  322 (335)
T ss_pred             CeEEEEeCCCc---------------------------c--HHHHHHHHHHCCeEEEE---C--CCCeEEecC----CHH
Confidence            77776655421                           1  24567778888875442   2  247999986    456


Q ss_pred             HHHHHHHHHHHH
Q 037144          487 HVRAAWTVVQEH  498 (502)
Q Consensus       487 di~~~~~~l~~~  498 (502)
                      +.++++++|++.
T Consensus       323 ~~~~~~~~l~~~  334 (335)
T PRK14808        323 ENDMILKELEVF  334 (335)
T ss_pred             HHHHHHHHHHhh
Confidence            899999998753

>TIGR00707 argD acetylornithine and succinylornithine aminotransferases

Probab=99.67  E-value=7.2e-14  Score=142.63  Aligned_cols=297  Identities=13%  Similarity=0.026  Sum_probs=167.3

Q ss_pred             HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCC-chhHHHHHHH
Q 037144          116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQT-HCAFQKAAQI  194 (502)
Q Consensus       116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~-H~s~~~aa~~  194 (502)
                      ....++.+++++++|.+         ..+++.||++|+..++.+++......    +.+++.|++.+.+ |.+...+ ..
T Consensus        69 ~~~~~l~~~la~~~g~~---------~~~~~~sg~~a~~~a~~~~~~~~~~~----~~~~~~vi~~~~~yh~~~~~~-~~  134 (379)
T TIGR00707        69 EPQEELAEKLVEHSGAD---------RVFFCNSGAEANEAALKLARKYTGDK----GKEKKKIIAFENSFHGRTMGA-LS  134 (379)
T ss_pred             HHHHHHHHHHHhhCCCC---------EEEEeCCcHHHHHHHHHHHHHHhhcc----CCCCCeEEEECCCcCCccHHH-HH
Confidence            34556777788888875         37899999999999988775431100    1123455555444 4333222 22


Q ss_pred             cCCCCCCE---EEEecCCCCCcc--cCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc----CChhHHHHHHHHhCCE
Q 037144          195 VGIDRKNI---RAIKTTKSSSYG--LSAESVLSQINLDVEAELIPLFLCATVGTTAITAV----DPLKPLCDVAKQFGIW  265 (502)
Q Consensus       195 ~Glg~~~v---~~v~~~~~~~~~--~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i----dpl~eI~~i~~~~g~~  265 (502)
                      .+..  ..   ...++..+-.+.  .|+++|++.+++++      .+|+++...+++|..    +++++|.++|++||++
T Consensus       135 ~~~~--~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~------~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~  206 (379)
T TIGR00707       135 ATGQ--PKYQKGFEPLVPGFSYAPYNDIESLKKAIDDET------AAVIVEPIQGEGGVNPASAEFLKALREICKDKDAL  206 (379)
T ss_pred             hcCC--hhhhccCCCCCCCceeeCCCCHHHHHHHhhhCe------eEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCE
Confidence            3220  11   112222111111  18999999887543      367777766666754    2489999999999999


Q ss_pred             EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCccccc
Q 037144          266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEV  345 (502)
Q Consensus       266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~  345 (502)
                      +++|++|.++............++ ..|.++  ++|.++.+...|+++.. ++.. +.+....  ..             
T Consensus       207 ~i~De~~~~~~~~g~~~~~~~~~~-~~d~~t--~sK~~~~G~riG~~~~~-~~~~-~~~~~~~--~~-------------  266 (379)
T TIGR00707       207 LIFDEVQTGIGRTGKFFAYEHYGI-EPDIIT--LAKGLGGGVPIGATLAK-EEVA-EAFTPGD--HG-------------  266 (379)
T ss_pred             EEEeccccCCCccchhhhHHhcCC-CCCEEE--EcccccCCcccEEEEEc-HHHH-hhhcCCC--CC-------------
Confidence            999999975422111010001122 346555  57999966778887764 3332 2221110  00             


Q ss_pred             CCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe-c--CCCeeEEEEEeecCcchhh
Q 037144          346 GYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA-F--PRNFSLVCFRVTPSAVMDK  422 (502)
Q Consensus       346 ~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~-~--~~~~~~v~f~~~~~~~~~~  422 (502)
                        .  ++ +........++++++.+..   .++.++..++++++++.|+++ +.... .  ++..+++.+.+.+.     
T Consensus       267 --~--~~-~~~~~~~~aa~aaL~~~~~---~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~g~~~~~~~~~~-----  332 (379)
T TIGR00707       267 --S--TF-GGNPLACAAALAVLEVIEK---ERLLENVKEKGDYFKERLEEL-GKNYPNKEVRGKGLMLGIELEAP-----  332 (379)
T ss_pred             --C--CC-CCCHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHH-HhhCCCCccccCceEEEEEecCc-----
Confidence              0  00 1111223344455554432   245667777888888887764 22221 1  12334555654321     


Q ss_pred             hhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144          423 LRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEH  498 (502)
Q Consensus       423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~  498 (502)
                                               ..++.+.|.++|..+...    +..++|++++.. .++++++++++.|+++
T Consensus       333 -------------------------~~~~~~~l~~~Gv~v~~~----~~~~lRi~~~~~-~t~~~i~~~~~~l~~~  378 (379)
T TIGR00707       333 -------------------------CKDIVKKALEKGLLVNCA----GPKVLRFLPPLI-ITKEEIDEAVSALEEA  378 (379)
T ss_pred             -------------------------HHHHHHHHHHCCcEEeeC----CCCEEEEECCCc-CCHHHHHHHHHHHHHh
Confidence                                     246677777888754432    346899997533 4566999999999865

Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)

>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]

Probab=99.67  E-value=7.9e-14  Score=133.20  Aligned_cols=244  Identities=14%  Similarity=0.176  Sum_probs=161.0

Q ss_pred             cccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCc--
Q 037144          108 WISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTH--  185 (502)
Q Consensus       108 ~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H--  185 (502)
                      ..+.|....+|+++    +.+=|-         -.++.++||..|..+|+.....           .++.|+.|..-+  
T Consensus        58 Ri~NPT~~vlE~Ri----AaLEGG---------~aa~a~aSG~AA~~~ai~~la~-----------aGD~iVss~~LYGG  113 (426)
T COG2873          58 RIMNPTTDVLEERI----AALEGG---------VAALAVASGQAAITYAILNLAG-----------AGDNIVSSSKLYGG  113 (426)
T ss_pred             eccCchHHHHHHHH----HHhhcc---------hhhhhhccchHHHHHHHHHhcc-----------CCCeeEeeccccCc
Confidence            34788888888774    444221         1457788888888888876544           567776665443  


Q ss_pred             --hhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhC
Q 037144          186 --CAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFG  263 (502)
Q Consensus       186 --~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g  263 (502)
                        .-+....+.+|+   +++.|+.+       |++.++++|+++++      +|.+..-.|+.+.+-|+++|+++|+++|
T Consensus       114 T~~lf~~tl~~~Gi---~v~fvd~~-------d~~~~~~aI~~nTk------avf~EtigNP~~~v~Die~ia~iAh~~g  177 (426)
T COG2873         114 TYNLFSHTLKRLGI---EVRFVDPD-------DPENFEAAIDENTK------AVFAETIGNPGLDVLDIEAIAEIAHRHG  177 (426)
T ss_pred             hHHHHHHHHHhcCc---EEEEeCCC-------CHHHHHHHhCcccc------eEEEEeccCCCccccCHHHHHHHHHHcC
Confidence              234455688999   99999753       79999999999987      7888888889999999999999999999


Q ss_pred             CEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCch--hh-----hhhhcCCcccccCcc
Q 037144          264 IWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPS--CL-----LSTLSTNPQYLKNEA  335 (502)
Q Consensus       264 ~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~--~l-----~~~~~~~~~yl~~~~  335 (502)
                      +.++||-..+..++ +...++      +||.|+-|..||+++. -..|.+++-...  +.     .......+.|-....
T Consensus       178 vpliVDNT~atpyl-~rP~~h------GADIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~  250 (426)
T COG2873         178 VPLIVDNTFATPYL-CRPIEH------GADIVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVY  250 (426)
T ss_pred             CcEEEecCCCccee-cchhhc------CCCEEEEeecccccCCccccceEEEeCCccccccCCCCcccCCCCccccceeh
Confidence            99999999988744 433343      9999999999999743 345556553221  10     000011111211100


Q ss_pred             CCCCCcccccCCC-cccccCCCC----CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q 037144          336 TDQEPKEQEVGYK-DWQITLCRR----FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAF  403 (502)
Q Consensus       336 ~~~~~~~~~~~~~-~~~~~~sr~----~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~  403 (502)
                      .+   ..+...+. ....++-|.    ..+...|..++  |.|-+.-++++++++|..+.+.|+++|.+.-++
T Consensus       251 ~~---~~g~~af~~~~r~~~lRDlGa~lsPfnAfl~lq--GlETL~LRmerH~~NA~~vA~~L~~HpkV~~V~  318 (426)
T COG2873         251 TE---TFGNAAFIIKARVQLLRDLGATLSPFNAFLLLQ--GLETLSLRMERHCENALKVAEFLENHPKVAWVN  318 (426)
T ss_pred             hh---hcccHHHHHHHHHHHHHhcccccCcHHHHHHHh--chhhhHHHHHHHHHhHHHHHHHHhcCCCeeeee
Confidence            00   00000000 000011121    23344454443  788899999999999999999999999988664

>COG3844 Kynureninase [Amino acid transport and metabolism]

Probab=99.67  E-value=2.3e-14  Score=134.20  Aligned_cols=313  Identities=16%  Similarity=0.101  Sum_probs=215.6

Q ss_pred             hhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHH-HHHHHHHHhCccCCCCeEEEeCCCCc-----
Q 037144          112 PAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTA-ARDRVLKKIGRENISKLVVYSSDQTH-----  185 (502)
Q Consensus       112 p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~-a~~~~~~~~~~~~~~~~~v~~s~~~H-----  185 (502)
                      +....+-..+.+.++.++|...+       +.+++.+.| .|+.-+++ +...         .++..|++|+..-     
T Consensus        72 ~~W~~lp~~lgdklApLiGA~~~-------Evvv~dtts-~nl~k~L~aalr~---------~~~r~vIv~E~~~fpTdl  134 (407)
T COG3844          72 ADWFDLPERLGDKLAPLIGARAG-------EVVVTDTTS-INLFKVLAAALRP---------QEGRRVIVSEGDNFPTDL  134 (407)
T ss_pred             CchhhchhHHHHHhhhhhcCCCC-------ceEEeCCcc-hHHHHHHHHHhcc---------CCCceEEeecCCCCCcch
Confidence            34456667788999999999765       566666654 45444443 3321         0244566665432     


Q ss_pred             hhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144          186 CAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW  265 (502)
Q Consensus       186 ~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~  265 (502)
                      |..+..++++|+|.+ +         .+.+.|+++++++++++.      +|++++...-||..-++.+|.++++++|++
T Consensus       135 y~a~g~~~~~~~~~~-~---------~~~~~P~~~~~~~~dd~A------vV~L~~V~y~TGql~dm~aiT~~AH~~gal  198 (407)
T COG3844         135 YIAEGLADLLGIGYD-L---------EGVIAPRALEEAITDDVA------VVLLSHVNYKTGQLLDMRAITALAHQHGAL  198 (407)
T ss_pred             hhhcchhhhhccccc-c---------eeeeChHHHHHhhccceE------EEEeccccccccceeeHHHHHHHHHhcCce
Confidence            455667788887421 1         246678899999999875      899999999999999999999999999999


Q ss_pred             EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccc
Q 037144          266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQE  344 (502)
Q Consensus       266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~  344 (502)
                      +.-|=||+++.++.+-+..      ++|+-+++.||+|+ +|.+.+++++.++.. .........|+.....-.  ....
T Consensus       199 v~wDLAHsaGavp~~Lh~~------gaDfaigcsyKYLNgGPGapa~l~v~~~h~-e~~~~~lsgW~gha~pf~--m~~~  269 (407)
T COG3844         199 VGWDLAHSAGAVPVDLHAA------GADFAIGCSYKYLNGGPGAPAGLFVAPRHR-ERSWPPLSGWWGHARPFA--MEEV  269 (407)
T ss_pred             EEeehhcccCCcceeeccc------CCCeeeeeeceeccCCCCCceeEEeccccc-cccccccccccCCCCcch--hhhc
Confidence            9999999999988775554      89999999999996 676778888755432 223333344544321100  0000


Q ss_pred             c--CCCcccccCCCC--CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC-C--CeEEecCC----CeeEEEEE
Q 037144          345 V--GYKDWQITLCRR--FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD-K--RFEVAFPR----NFSLVCFR  413 (502)
Q Consensus       345 ~--~~~~~~~~~sr~--~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~-~--~~~l~~~~----~~~~v~f~  413 (502)
                      +  ..+-..+.++..  ....++-.+|..++.-++.++.++...++++|.+.++.. +  ++++..|.    +.+.|+|.
T Consensus       270 y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~  349 (407)
T COG3844         270 YAPGPGARRFLCGTQPVLSLAALEGALDIFADVDITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLY  349 (407)
T ss_pred             cCcCccccceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeEe
Confidence            0  111112222222  122344556666777779999999999999999999763 3  67787652    35677877


Q ss_pred             eecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHH
Q 037144          414 VTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWT  493 (502)
Q Consensus       414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~  493 (502)
                      .+.                               ..++.+.|.++|.+    +.++...+|||.++-.+++-+||=.+++
T Consensus       350 hp~-------------------------------~~~V~qaLi~rGVi----gD~R~P~vlRfgftPlY~~~~DVw~AV~  394 (407)
T COG3844         350 HPH-------------------------------GYQVMQALIDRGVI----GDFREPDVLRFGFTPLYVSFVDVWDAVD  394 (407)
T ss_pred             cCc-------------------------------HHHHHHHHHHcCcc----ccccCCCeeeecCccceechhHHHHHHH
Confidence            653                               24567777778965    3456678999999988899999999999


Q ss_pred             HHHHHHHh
Q 037144          494 VVQEHLEA  501 (502)
Q Consensus       494 ~l~~~~~~  501 (502)
                      .|.++.++
T Consensus       395 ~L~evL~t  402 (407)
T COG3844         395 ALEEVLDT  402 (407)
T ss_pred             HHHHHHHh
Confidence            99998764

>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []

Probab=99.66  E-value=1.7e-14  Score=144.13  Aligned_cols=286  Identities=11%  Similarity=0.094  Sum_probs=165.1

Q ss_pred             cccCCCCCCHHHHHHHHHHhhc-CCCCcc------cccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHH
Q 037144           80 FAYFPATSSVAGIVGEMLSSGF-NVVGLD------WISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEA  152 (502)
Q Consensus        80 ~~~~~~~~~~~~~~~~~l~~~~-n~~~~~------~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a  152 (502)
                      +..+++-..+...+.+.+.+.+ |.+...      |.......++|.-+.+.++++||+++...+    .-+=..||+.|
T Consensus        23 l~LiaSEN~~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~~~~~w~----anvqp~SGs~A   98 (399)
T PF00464_consen   23 LNLIASENYMSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFGAEPKEWY----ANVQPHSGSQA   98 (399)
T ss_dssp             EE-CTT-----HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT-STTTEE----EE---SSHHHH
T ss_pred             ccccCcccccCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhCCCcccce----EEeecCCchHH
Confidence            4445554444555555655544 333322      334456789999999999999999743211    12335588999


Q ss_pred             HHHHHHHHHHHHHHHhCccCCCCeEEEeC---CCCchhHHHHHHH-------cCCCCCCEEEEecCCCCCcccCHHHHHH
Q 037144          153 LLCTLTAARDRVLKKIGRENISKLVVYSS---DQTHCAFQKAAQI-------VGIDRKNIRAIKTTKSSSYGLSAESVLS  222 (502)
Q Consensus       153 ~~~al~~a~~~~~~~~~~~~~~~~~v~~s---~~~H~s~~~aa~~-------~Glg~~~v~~v~~~~~~~~~~d~~~Le~  222 (502)
                      |+.++.+..+           +++.|+.-   .-+|.|.-.....       ...   +++.+++|++ ++.+|.+++++
T Consensus        99 n~av~~aLl~-----------pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~---~~~~y~~d~~-~~~ID~d~l~~  163 (399)
T PF00464_consen   99 NLAVYMALLK-----------PGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYF---ESVPYPVDPD-TGLIDYDELEK  163 (399)
T ss_dssp             HHHHHHHHT------------TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHS---EEEEEEB-TT-TSSB-HHHHHH
T ss_pred             HHHHHHHHHh-----------hcCcEEecChhhcccccccccccccccccccceE---EEEeeeeecC-CCeECHHHHHH
Confidence            9777666654           56666543   3346654333222       334   6778888864 58999999999


Q ss_pred             HHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCc
Q 037144          223 QINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKW  302 (502)
Q Consensus       223 ~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~  302 (502)
                      .+.+.+     |.+|++-.  +..-..-|++++.+||++.|++|++|+||-.+......+...+   +.||+++.+.||+
T Consensus       164 ~a~~~k-----PklIi~G~--S~y~~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~---~~ADvvt~sThKt  233 (399)
T PF00464_consen  164 LAKEHK-----PKLIICGA--SSYPRPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPF---PYADVVTGSTHKT  233 (399)
T ss_dssp             HHHHH-------SEEEEE---SSTSS---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GC---CTSSEEEEESSGG
T ss_pred             HHhhcC-----CCEEEECc--hhccCccCHHHHHHHHHhcCcEEEecccccccceehheecCcc---ccceEEEeecccc
Confidence            998754     55666543  2344457899999999999999999999977766554443333   3799999999999


Q ss_pred             CCCCCcceEEEeeCc------------hhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCC-CchHHHHHHHH
Q 037144          303 LFTTLDCCCLWVKDP------------SCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRF-RSLKLWVVIRN  369 (502)
Q Consensus       303 l~~p~~~g~~~~r~~------------~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~-~al~~~~~l~~  369 (502)
                      |.+|. +|++++++.            ..+.+.+..   .++.                 +.+++-.. ...++..+++.
T Consensus       234 l~GPr-ggiI~~~~~~~~~~~~~~~~~~~l~~~I~~---avfP-----------------~~qg~~h~~~iaalAval~e  292 (399)
T PF00464_consen  234 LRGPR-GGIILTNKGSKNVDKKGKEIDEELAEKIDS---AVFP-----------------GLQGGPHMHRIAALAVALKE  292 (399)
T ss_dssp             G-SSS--EEEEES-SEEEE-TTS-EEEHHHHHHHHH---HHTT-----------------TT-SS--HHHHHHHHHHHHH
T ss_pred             ccccC-ceEEEEcCCccccCCcccccHHHHHHHhcc---ccCC-----------------CcccCcchhHHHHHHHHHhc
Confidence            99996 578777711            111111110   0110                 11111111 12344456665


Q ss_pred             hcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-CCeeEEEEEeec
Q 037144          370 FGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP-RNFSLVCFRVTP  416 (502)
Q Consensus       370 ~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~-~~~~~v~f~~~~  416 (502)
                      .....+.+..++..++|+.|.+.|.+. |+.++.. .+..+|.+...+
T Consensus       293 a~~~~fk~Ya~qVv~NAk~La~~L~~~-G~~v~~ggTd~H~vlvd~~~  339 (399)
T PF00464_consen  293 ALSPEFKEYAKQVVKNAKALAEALQER-GFKVVTGGTDNHQVLVDLRS  339 (399)
T ss_dssp             HTSHHHHHHHHHHHHHHHHHHHHHHHT-T-EEGGGS-SSSEEEEEGGG
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHHHhhC-CcEEEECCCCCCeEEEEecc
Confidence            555667899999999999999999997 8999852 345677776654

The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....

>PRK09440 avtA valine--pyruvate transaminase; Provisional

Probab=99.66  E-value=3.9e-14  Score=146.44  Aligned_cols=336  Identities=12%  Similarity=0.044  Sum_probs=187.0

Q ss_pred             HHHHHHHHHhhcCCC-----CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHH
Q 037144           90 AGIVGEMLSSGFNVV-----GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRV  164 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~-----~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~  164 (502)
                      ...+.+.+...++..     ...|....+..++.+.+.+|+.+.+|.+-..     ...++|+|+++++..++.+.... 
T Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~-----~~I~it~Ga~~al~~~~~~l~~~-  120 (416)
T PRK09440         47 EDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISP-----QNIALTNGSQSAFFYLFNLFAGR-  120 (416)
T ss_pred             HHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCh-----hhEEEccChHHHHHHHHHHHhcc-
Confidence            455666666555432     1346555567889999999999888864221     26889999998886665544321 


Q ss_pred             HHHhCccCCCCeEEEe-CCCCchhHHHHHHHcCC-CCCCEEEEecCCCC-CcccCHHHHHHHHHHHHhcCCccEEEEEec
Q 037144          165 LKKIGRENISKLVVYS-SDQTHCAFQKAAQIVGI-DRKNIRAIKTTKSS-SYGLSAESVLSQINLDVEAELIPLFLCATV  241 (502)
Q Consensus       165 ~~~~~~~~~~~~~v~~-s~~~H~s~~~aa~~~Gl-g~~~v~~v~~~~~~-~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~  241 (502)
                          +.+ .+++.|++ ..+++..+..++...|. ....+..++++.++ ++.+|+++|+  +..      .+.+|+++.
T Consensus       121 ----~~~-~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~------~~~~i~l~~  187 (416)
T PRK09440        121 ----RAD-GSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--IDE------DTGAICVSR  187 (416)
T ss_pred             ----ccC-CCCCeEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcc--cCC------CceEEEEec
Confidence                000 13556777 56777777766554332 00023334443221 3679999987  221      234788889


Q ss_pred             CCccccccCC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCch
Q 037144          242 GTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPS  318 (502)
Q Consensus       242 gtt~~G~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~  318 (502)
                      ++|+||.+-+   +++|+++|++|++|+++|.+|+... ....+.........--.+..+++|++.....+|+++. ++.
T Consensus       188 P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~-~~~~~~~~~~~~~~~vI~~~SfSK~~~pGlRiG~~i~-~~~  265 (416)
T PRK09440        188 PTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPF-PGIIFSEATPLWNPNIILCMSLSKLGLPGVRCGIVIA-DEE  265 (416)
T ss_pred             CCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccC-CCcchhhcCccccCCeEEEecccccCCCcceEEEEeC-CHH
Confidence            9999999955   7788899999999999999996321 1100111000000111445679998666667787765 443


Q ss_pred             hhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHH----H-HHHHHHHHHHHHHHHH
Q 037144          319 CLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLR----N-FIRSHVGMAKLFERLV  393 (502)
Q Consensus       319 ~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~----~-~~~~~~~la~~l~~~l  393 (502)
                      .+. .+.....+...                       ....+...++.+.+....+.    + +.+.+.++.+.+.+.|
T Consensus       266 l~~-~~~~~~~~~~~-----------------------~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L  321 (416)
T PRK09440        266 IIE-ALSNMNGIISL-----------------------APGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALL  321 (416)
T ss_pred             HHH-HHHHHHHHhcc-----------------------CCCcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            322 22111111000                       01234444444444221122    2 2333455556666666


Q ss_pred             hcC-C--CeEEecCCC-eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC
Q 037144          394 TSD-K--RFEVAFPRN-FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG  469 (502)
Q Consensus       394 ~~~-~--~~~l~~~~~-~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~  469 (502)
                      .+. +  ++++. +|. ...+++.+++...                         +  ..++.+.+.+.|..+.++..+.
T Consensus       322 ~~~l~~~~~~~~-~p~gg~fiw~~~~~~~~-------------------------~--~~~~~~~l~~~gV~v~pg~~F~  373 (416)
T PRK09440        322 RRYLPDEPCLIH-KPEGAIFLWLWFKDLPI-------------------------T--TEELYQRLKARGVLVVPGHYFF  373 (416)
T ss_pred             HHhcccCCeEEe-cCCCceEEEEECCCCCC-------------------------C--HHHHHHHHHHCCEEEechHhhC
Confidence            542 2  35544 444 3444444432111                         0  1345566666787555443331


Q ss_pred             -C--------EEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          470 -G--------IYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       470 -g--------~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                       +        ..++|++++.   ++++++++++.|.++.++
T Consensus       374 ~~~~~~~~~~~~~iRis~~~---~~~~l~~~i~~l~~~~~~  411 (416)
T PRK09440        374 PGLDEDWPHAHQCIRMNYVQ---DDEEIEKGIAILAEEVEK  411 (416)
T ss_pred             CCCccccCCcCceEEEEecC---CHHHHHHHHHHHHHHHHH
Confidence             1        2489999973   467999999999887654

>PRK01278 argD acetylornithine transaminase protein; Provisional

Probab=99.66  E-value=1.5e-13  Score=140.68  Aligned_cols=299  Identities=13%  Similarity=0.075  Sum_probs=162.8

Q ss_pred             HHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCC
Q 037144          118 ENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGI  197 (502)
Q Consensus       118 e~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Gl  197 (502)
                      ..++.+.|+++.+.+         .+++++||++||..|+.++|.....+ |..+ +..+|......|.+..-+....|.
T Consensus        75 ~~~la~~l~~~~~~~---------~v~~~~sGseA~~~al~~ar~~~~~~-G~~~-r~~vi~~~~~yhg~~~~~~~~~~~  143 (389)
T PRK01278         75 QERLAERLVENSFAD---------KVFFTNSGAEAVECAIKTARRYHYGK-GHPE-RYRIITFEGAFHGRTLATIAAGGQ  143 (389)
T ss_pred             HHHHHHHHHhhCCCC---------EEEEcCCcHHHHHHHHHHHHHHHHhc-CCCC-CCEEEEECCCcCCCcHHHHhccCC
Confidence            334556666765432         47999999999999999998753221 1100 223444444455444333333222


Q ss_pred             CCCCEEE---EecCCCCCcc----cCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc----CChhHHHHHHHHhCCEE
Q 037144          198 DRKNIRA---IKTTKSSSYG----LSAESVLSQINLDVEAELIPLFLCATVGTTAITAV----DPLKPLCDVAKQFGIWV  266 (502)
Q Consensus       198 g~~~v~~---v~~~~~~~~~----~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i----dpl~eI~~i~~~~g~~l  266 (502)
                         ....   .|..+  ++.    .|+++|+++++++      +.+|+++...+++|.+    +++++|.++|++||+++
T Consensus       144 ---~~~~~~~~~~~~--~~~~~~~~d~~~l~~~l~~~------~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~l  212 (389)
T PRK01278        144 ---EKYLEGFGPLVP--GFDQVPFGDIEALKAAITPN------TAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLL  212 (389)
T ss_pred             ---hhhcccCCCCCC--CceEeCCCCHHHHHHhhCCC------eEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEE
Confidence               1111   01111  111    5899999988643      3467777666666733    57999999999999999


Q ss_pred             EeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccC
Q 037144          267 HVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVG  346 (502)
Q Consensus       267 hVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~  346 (502)
                      ++|.+|.++......+.....++ ..|.++  +.|.++..+..|+++.++. . .+.+.....+                
T Consensus       213 I~DEv~~g~g~~g~~~~~~~~~~-~pdi~t--~sK~l~~G~~ig~~~~~~~-~-~~~~~~~~~~----------------  271 (389)
T PRK01278        213 IFDEVQCGMGRTGKLFAHEWAGV-TPDIMA--VAKGIGGGFPLGACLATEE-A-AKGMTPGTHG----------------  271 (389)
T ss_pred             EEeccccCCCcCCcceeecccCC-CCCEEE--EehhccCCcceEEEEEcHH-H-HhccCCCCCC----------------
Confidence            99999986532211111001123 356554  5699876667888877543 2 2222111000                


Q ss_pred             CCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCe-EEecCCCeeEEEEEeecCcchh
Q 037144          347 YKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTS----DKRF-EVAFPRNFSLVCFRVTPSAVMD  421 (502)
Q Consensus       347 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~----~~~~-~l~~~~~~~~v~f~~~~~~~~~  421 (502)
                         .++ ++.+..+.++.++++.+-.+   +..++..++.++++++|++    .+++ ..+ .+...++.+.+...    
T Consensus       272 ---~t~-~~~~~~~aaa~a~l~~l~~~---~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~v-~g~G~~~~i~~~~~----  339 (389)
T PRK01278        272 ---STY-GGNPLAMAVGNAVLDVILAP---GFLDNVQRMGLYLKQKLEGLVDRFPDVIEEV-RGKGLLLGLKCVVP----  339 (389)
T ss_pred             ---CCC-CccHHHHHHHHHHHHHHhhh---HHHHHHHHHHHHHHHHHHHHHhhCCCceeeE-ecccEEEEEEEecC----
Confidence               011 11111222333344444222   2344555666666666654    3221 111 12222333333211    


Q ss_pred             hhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          422 KLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                                                ..++.+++.++|....+.    +..++|++... ..++++|+++++.|++++++
T Consensus       340 --------------------------~~~~~~~l~~~GV~~~p~----~~~~lR~~p~~-~~~~~~i~~~l~~l~~~l~~  388 (389)
T PRK01278        340 --------------------------NRDLVQALRDEGLLTVGA----GDNVVRLLPPL-IITEEEIDEALERLERAAES  388 (389)
T ss_pred             --------------------------HHHHHHHHHHCCeEEeec----CCCEEEEeCCc-ccCHHHHHHHHHHHHHHHHh
Confidence                                      246677777788654332    34689999743 34677999999999998765


Q ss_pred             C
Q 037144          502 F  502 (502)
Q Consensus       502 ~  502 (502)
                      +
T Consensus       389 ~  389 (389)
T PRK01278        389 L  389 (389)
T ss_pred             C
Confidence            3

>TIGR01885 Orn_aminotrans ornithine aminotransferase

Probab=99.66  E-value=4.9e-13  Score=137.42  Aligned_cols=305  Identities=10%  Similarity=0.047  Sum_probs=178.7

Q ss_pred             HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCC-chhHHHHHHH
Q 037144          116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQT-HCAFQKAAQI  194 (502)
Q Consensus       116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~-H~s~~~aa~~  194 (502)
                      ....++.+.|++++|.+         ..+++++|++||..|+..+|.....+.+.. .++.+|++...+ |-+...+..+
T Consensus        79 ~~~~~l~~~l~~~~~~~---------~~~~~~SGs~A~e~ai~~a~~~~~~~~~~~-~~~~~i~~~~~~yhg~~~~~~~~  148 (401)
T TIGR01885        79 DVFGEFAEYVTKLFGYD---------KVLPMNTGAEAVETAIKLARKWGYKVKGIP-ENQAIIVSAKGNFHGRTLGAISM  148 (401)
T ss_pred             HHHHHHHHHHHhhcCCC---------EEEEeCccHHHHHHHHHHHHHHhhhhcCCC-CCCCEEEEECCCcCcccHHHHhC
Confidence            34445556677777753         478999999999999999987532211100 134566666656 5455555554


Q ss_pred             cCC-------C--CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHHHHH
Q 037144          195 VGI-------D--RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDVAKQ  261 (502)
Q Consensus       195 ~Gl-------g--~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~~~  261 (502)
                      .|-       |  ...+..+|.       -|+++|+++|++.   +....+|++....+++|.+-|    +++|.++|++
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~---~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~  218 (401)
T TIGR01885       149 STDPDSRTNFGPYVPGFKKIPY-------NNLEALEEALEDH---GPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTK  218 (401)
T ss_pred             cCCcccccccCCCCCCceEeCC-------CCHHHHHHHHHhc---CCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHH
Confidence            331       1  012333432       2789999988642   223446666667778899877    9999999999


Q ss_pred             hCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCcccccCccCCCCC
Q 037144          262 FGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEP  340 (502)
Q Consensus       262 ~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~  340 (502)
                      ||+++++|.+|.+.......+.....++ ..|.++++  |.++.. +..|+++.+ ++.. +.+...  +..        
T Consensus       219 ~~~lli~DEv~~g~g~~G~~~~~~~~~~-~~di~~~g--K~l~~g~~~ig~v~~~-~~i~-~~~~~~--~~~--------  283 (401)
T TIGR01885       219 HNVLLIADEIQTGLGRTGKLLCVDHENV-KPDIVLLG--KALSGGVYPVSAVLAD-DDVM-LTIKPG--EHG--------  283 (401)
T ss_pred             cCCEEEEechhhCCCccchhhHHhhcCC-CCCEEEee--ccccCCCCCcEEEEEc-HHHH-hhccCC--CCC--------
Confidence            9999999999865322111111111223 57888765  988755 456766654 3332 222110  000        


Q ss_pred             cccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec--CCCeeEEEEEeecCc
Q 037144          341 KEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAF--PRNFSLVCFRVTPSA  418 (502)
Q Consensus       341 ~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~--~~~~~~v~f~~~~~~  418 (502)
                               .+. ++.+.....+.++++.+..+   .+.++..+++++|++.|++++ ..++.  .....++.+.+....
T Consensus       284 ---------~t~-~~~p~~~~aa~a~L~~i~~~---~l~~~~~~~~~~~~~~L~~l~-~~~~~~~~g~g~~~~i~~~~~~  349 (401)
T TIGR01885       284 ---------STY-GGNPLACAVAVAALEVLEEE---KLAENAEKLGEIFRDQLKKLP-KPIITEVRGRGLLNAIVIDESK  349 (401)
T ss_pred             ---------CCC-CCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHhcc-CCceeEEeecCeeEEEEeccCc
Confidence                     011 11122333444555555333   344677788999999999873 23321  122334443333210


Q ss_pred             chhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144          419 VMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEH  498 (502)
Q Consensus       419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~  498 (502)
                                           .    .....++.++|.++|.. +.+.   +...+|++.+ ...++++|++++++|+++
T Consensus       350 ---------------------~----~~~~~~l~~~l~~~Gv~-v~~~---~~~~lRi~p~-l~~t~~~i~~~l~~l~~~  399 (401)
T TIGR01885       350 ---------------------T----GRTAWDLCLKLKEKGLL-AKPT---HGNIIRLAPP-LVITEEQLDEGLEIIKKV  399 (401)
T ss_pred             ---------------------c----hhHHHHHHHHHHhCCEE-EEec---CCCEEEEeCC-ccCCHHHHHHHHHHHHHH
Confidence                                 0    01235778888888864 3332   3468999975 456778999999999876


Q ss_pred             H
Q 037144          499 L  499 (502)
Q Consensus       499 ~  499 (502)
                      .
T Consensus       400 l  400 (401)
T TIGR01885       400 I  400 (401)
T ss_pred             h
Confidence            4

This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.

>PRK12462 phosphoserine aminotransferase; Provisional

Probab=99.66  E-value=1.4e-14  Score=143.89  Aligned_cols=338  Identities=12%  Similarity=0.014  Sum_probs=208.1

Q ss_pred             ccccCCCCCCHH-HHHHHHHHhhcCCCCc------ccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcE-EEcCCch
Q 037144           79 YFAYFPATSSVA-GIVGEMLSSGFNVVGL------DWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGG-VIQGTTC  150 (502)
Q Consensus        79 ~~~~~~~~~~~~-~~~~~~l~~~~n~~~~------~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g-~~t~ggt  150 (502)
                      -+.|.+++...| .++..+-.+.+|..+.      ...-++.+.++-+++.+.|+++++.|++.      .+ ++++|||
T Consensus         5 ~~nF~aGPa~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~~y------~Vlfl~GggT   78 (364)
T PRK12462          5 QLNFSGGPGALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPDEY------GVVFLQGGSS   78 (364)
T ss_pred             cceecCCCcCCCHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHhCCCCCC------eEEEEeccHH
Confidence            456666665555 5555555555554331      22356788999999999999999998654      44 5566677


Q ss_pred             HHHHHHHHHHHHHHHHHhCccCCCCe-EE-EeCCCCchh--HHHHHHHcCCCCCCEEEEecCCCC--CcccCHHHHHHHH
Q 037144          151 EALLCTLTAARDRVLKKIGRENISKL-VV-YSSDQTHCA--FQKAAQIVGIDRKNIRAIKTTKSS--SYGLSAESVLSQI  224 (502)
Q Consensus       151 ~a~~~al~~a~~~~~~~~~~~~~~~~-~v-~~s~~~H~s--~~~aa~~~Glg~~~v~~v~~~~~~--~~~~d~~~Le~~i  224 (502)
                      .+.-.++.....           ++. ++ ++. .++.+  +.+-|+.+|    ++..+...+..  ....+++.+  .+
T Consensus        79 ~~~ea~~~Nll~-----------~g~~~~~~~~-tG~fg~r~~~ea~~~g----~v~~~~~~~~~~~~~~p~~~~~--~~  140 (364)
T PRK12462         79 LQFSMIPMNFSR-----------PGAAAPEYVT-TGYWSRKAIGEASRVA----AMRVVWDGAASGYRTLPSLAEL--DW  140 (364)
T ss_pred             HHHHHHHHHcCC-----------CCCcEEEEEe-CCHHHHHHHHHHHhcC----CceEecCcCCCCCCcCCCHHHh--cc
Confidence            665444433322           233 33 333 35544  445555555    24444321111  124456654  12


Q ss_pred             HHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCC
Q 037144          225 NLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLF  304 (502)
Q Consensus       225 ~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~  304 (502)
                      .++      ..+|..|+..|.+|+..|     ++.+.++..++||++-..+..+++-        ++.|.+..+.+|.++
T Consensus       141 ~~d------~~~v~~t~NETstGv~~~-----~~~~~~~~llvvD~sS~~~s~pid~--------~~~dvi~agsQKnlg  201 (364)
T PRK12462        141 DAR------APFRHYVSNETVEGLQFP-----DAAGLPDSPLIADMSSDFMSRPFDV--------EAYGMVYAHAQKNLG  201 (364)
T ss_pred             CCC------CcEEEEccCCCCceEecC-----cccccCCCeEEEEcCchhhCCCCCh--------HHccEEEeeccccCC
Confidence            222      237999999999999986     3334468999999987665555432        256999999999998


Q ss_pred             CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHH--HHHHHHHHH
Q 037144          305 TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVA--NLRNFIRSH  382 (502)
Q Consensus       305 ~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~--g~~~~~~~~  382 (502)
                       |.|.++++++++.+- ..-...+.|+.-....        + ...+..+.--+....+-.+++.+-.+  |++++.+++
T Consensus       202 -P~Gltvvivs~~al~-~~~~~~p~~ldy~~~~--------~-~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~  270 (364)
T PRK12462        202 -PAGVTVAIIRRALLE-RVPDTLPPMLDFRTHV--------E-HRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDIN  270 (364)
T ss_pred             -CCceEEEEECHHHHh-hccccCCchhhHHHHH--------h-cCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHH
Confidence             889999999877542 2212223333211000        0 00000000001123444566666666  999999999


Q ss_pred             HHHHHHHHHHHhcCCCeEEec-CC---CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc
Q 037144          383 VGMAKLFERLVTSDKRFEVAF-PR---NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS  458 (502)
Q Consensus       383 ~~la~~l~~~l~~~~~~~l~~-~~---~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~  458 (502)
                      .+.++.+++.|.+.++|.... .+   ....|+|++..                            .++..++.+...+.
T Consensus       271 ~~ka~~ly~~id~~~~~~~~~~~~~~RS~mnv~f~~~~----------------------------~~l~~~f~~~a~~~  322 (364)
T PRK12462        271 ARKAAMLYATLDALNEVIDCHAHRAARSTMNVAFRFRQ----------------------------PRLDTLFKEQSTEA  322 (364)
T ss_pred             HHHHHHHHHHHHhCCCcccCCCChhhcCcceEEEEcCC----------------------------HHHHHHHHHHHHHC
Confidence            999999999999998676542 11   23467888653                            23466788888888


Q ss_pred             CcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          459 GKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       459 g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      |.+-+.+..  ..+.+|+|+=|. .+.+++++|++-+++..++
T Consensus       323 gl~~lkGhr--~vgg~Ras~yna-~~~e~v~~L~~fm~~f~~~  362 (364)
T PRK12462        323 GFCGLSGHR--SIGGIRASLYNA-VSEQAVSRLCAFLKDFAIR  362 (364)
T ss_pred             CCccccCCc--ccCceEEEcCCC-CCHHHHHHHHHHHHHHHHh
Confidence            986655532  244599997554 5667999999999887654

>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]

Probab=99.65  E-value=1.3e-13  Score=137.77  Aligned_cols=286  Identities=14%  Similarity=0.118  Sum_probs=197.5

Q ss_pred             HHHHHHHHhcC-CCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCC
Q 037144          120 IVMDWLGQMLD-LPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGID  198 (502)
Q Consensus       120 ~~~~~l~~l~g-~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg  198 (502)
                      ++.+.+++.+| .+..       .+++..|+++.+-..+.+.+.           +++.|+++.+++..+...++..|. 
T Consensus        61 ~l~~a~a~~~~~~~~~-------~V~~gnGsde~i~~l~~~~~~-----------~gd~vl~~~Ptf~~Y~~~a~~~g~-  121 (356)
T COG0079          61 ELRAALAEYYGVVDPE-------NVLVGNGSDELIELLVRAFVE-----------PGDTVLIPEPTFSMYEIAAQLAGA-  121 (356)
T ss_pred             HHHHHHHHHhCCCCcc-------eEEEcCChHHHHHHHHHHhhc-----------CCCEEEEcCCChHHHHHHHHhcCC-
Confidence            34455778888 4443       466677777766555544443           567888888999999999999999 


Q ss_pred             CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh--CCEEEeeccccccc
Q 037144          199 RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF--GIWVHVDAAYAGSA  276 (502)
Q Consensus       199 ~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~--g~~lhVDaA~g~~~  276 (502)
                        +++.||.++   +.+|++.+.+++.++.+      +|+++.|+|+||..-+.++|.++++..  +.+++||.||.-+.
T Consensus       122 --~~~~v~~~~---~~~d~~~~~~~~~~~~~------lv~i~nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvDEAY~eF~  190 (356)
T COG0079         122 --EVVKVPLKE---FRLDLDAILAAIRDKTK------LVFLCNPNNPTGTLLPREELRALLEALPEGGLVVIDEAYIEFS  190 (356)
T ss_pred             --eEEEecccc---cccCHHHHHHhhhcCCC------EEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhcC
Confidence              999999873   79999999999987443      899999999999998888888888754  78999999996654


Q ss_pred             ccCccchhhhcCCCCCC--eeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCccccc
Q 037144          277 CICPEFRHFIDGVECVD--SFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQIT  353 (502)
Q Consensus       277 ~~~~~~~~~~~~~~~aD--si~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~  353 (502)
                      -  +..-..+.   .-+  .+.=++.|.++ ....+|+ .+.++..+.......++|-.                     
T Consensus       191 ~--~~~~~l~~---~~~nlivlRTfSKa~gLAGlRlGy-~ia~~~~i~~l~~vr~p~~v---------------------  243 (356)
T COG0079         191 P--ESSLELLK---YPPNLIVLRTFSKAFGLAGLRVGY-AIANPELIAALNKVRPPFNV---------------------  243 (356)
T ss_pred             C--chhhhhcc---CCCCEEEEEecHHhhhcchhceee-ccCCHHHHHHHHHhcCCCCC---------------------
Confidence            3  21111111   222  45556899876 4566777 45566554433333333311                     


Q ss_pred             CCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCc
Q 037144          354 LCRRFRSLKLWVVIRNF-GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTY  432 (502)
Q Consensus       354 ~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~  432 (502)
                           ..+...++...+ -.+.+++.+++....++++.+.|++++ +.-+.++..|++.++....               
T Consensus       244 -----~~~a~~aa~aal~~~~~~~~~~~~~~~~r~rl~~~l~~~~-~~~v~pS~aNFvlv~~~~~---------------  302 (356)
T COG0079         244 -----SSPALAAAIAALRDADYLEESVERIREERERLYAALKALG-LFGVFPSQANFVLVRVPDA---------------  302 (356)
T ss_pred             -----CHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcEEEEECCCc---------------
Confidence                 233334444433 236678888889999999999999986 5533366677777776431               


Q ss_pred             ccccccchhHhhHHHHHHHHHHHHhcCcEEEEeee-ECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          433 DQYRQFSEEERTNEFNRELLESINVSGKVFMTHAI-VGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       433 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                                   . ...+.+.|.++|.++-.... .....++|+++.    ++++-++++++|+++.+.
T Consensus       303 -------------~-~~~l~~~L~~~giivR~~~~~~~~~~~lRitvg----t~een~~ll~AL~~~~~~  354 (356)
T COG0079         303 -------------E-AAALAEALLKKGILVRDCSSVGLLPGYLRITVG----TPEENDRLLAALREVLKG  354 (356)
T ss_pred             -------------c-HHHHHHHHHHCCEEEEeCCCCCCCCCeEEEEeC----CHHHHHHHHHHHHHHHhc
Confidence                         1 34677778888987655543 223569999987    445679999999987653

>PRK08354 putative aminotransferase; Provisional

Probab=99.65  E-value=7e-14  Score=138.68  Aligned_cols=148  Identities=14%  Similarity=-0.030  Sum_probs=106.5

Q ss_pred             HHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCC
Q 037144          121 VMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRK  200 (502)
Q Consensus       121 ~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~  200 (502)
                      +++++++.+|.          .+++|+|+++++...+... .           +++.|++..++|+.+..+++.+|+   
T Consensus        45 l~~~ia~~~~~----------~I~vt~G~~~al~~~~~~~-~-----------~gd~vlv~~P~y~~~~~~~~~~g~---   99 (311)
T PRK08354         45 LEEEFSKLFGE----------PIVITAGITEALYLIGILA-L-----------RDRKVIIPRHTYGEYERVARFFAA---   99 (311)
T ss_pred             HHHHHHHHHCC----------CEEECCCHHHHHHHHHHhh-C-----------CCCeEEEeCCCcHHHHHHHHHcCC---
Confidence            45677888762          4789999999876544221 1           567788899999999999999999   


Q ss_pred             CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hhHHHHHHHHhCCEEEeecccccccc
Q 037144          201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSAC  277 (502)
Q Consensus       201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~  277 (502)
                      +++.++        +|++.|++++++ +      .+++.+.++|+||.+-+   +++|+++|+++|+|+++|.+|+.+..
T Consensus       100 ~~~~~~--------~d~~~l~~~~~~-~------~~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~  164 (311)
T PRK08354        100 RIIKGP--------NDPEKLEELVER-N------SVVFFCNPNNPDGKFYNFKELKPLLDAVEDRNALLILDEAFIDFVK  164 (311)
T ss_pred             EEeecC--------CCHHHHHHhhcC-C------CEEEEecCCCCCCCccCHHHHHHHHHHhhhcCcEEEEeCcchhccc
Confidence            886543        578888887752 1      26777889999999865   66777888999999999999977643


Q ss_pred             cCccchhhhcCCCCCCeeEEccCCcCC-CCCcceEEEe
Q 037144          278 ICPEFRHFIDGVECVDSFSFNPHKWLF-TTLDCCCLWV  314 (502)
Q Consensus       278 ~~~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~  314 (502)
                      .. .  . ..  ..--.++.++.|.++ ....+|+++.
T Consensus       165 ~~-~--~-~~--~~~vi~~~S~SK~~~l~GlRiG~~v~  196 (311)
T PRK08354        165 KP-E--S-PE--GENIIKLRTFTKSYGLPGIRVGYVKG  196 (311)
T ss_pred             cc-c--c-cC--CCcEEEEeccHhhcCCccceeeeeee
Confidence            21 1  0 00  011244566899998 4466787775

>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal)

Probab=99.64  E-value=6.4e-14  Score=141.25  Aligned_cols=236  Identities=17%  Similarity=0.233  Sum_probs=161.2

Q ss_pred             ccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhH
Q 037144          109 ISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAF  188 (502)
Q Consensus       109 ~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~  188 (502)
                      ...|....+|+.    ++.+-|..         .++++++|..|+..++.+...           +++.|+++...+...
T Consensus        52 ~gnPt~~~le~~----la~Le~g~---------~a~~~~SGmaAi~~~l~~ll~-----------~Gd~iv~~~~~Y~~t  107 (386)
T PF01053_consen   52 YGNPTVRALEQR----LAALEGGE---------DALLFSSGMAAISAALLALLK-----------PGDHIVASDDLYGGT  107 (386)
T ss_dssp             TC-HHHHHHHHH----HHHHHT-S---------EEEEESSHHHHHHHHHHHHS------------TTBEEEEESSSSHHH
T ss_pred             cccccHHHHHHH----HHHhhccc---------ceeeccchHHHHHHHHHhhcc-----------cCCceEecCCccCcc
Confidence            355666666655    67776653         468888998888777665543           567788887777655


Q ss_pred             HHHH----HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhC-
Q 037144          189 QKAA----QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFG-  263 (502)
Q Consensus       189 ~~aa----~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g-  263 (502)
                      .+.+    ...|+   ++..++.       -|+++|+++++++++      +|.+..++|++..+-||++|+++|+++| 
T Consensus       108 ~~~~~~~l~~~gv---~v~~~d~-------~d~~~l~~~l~~~t~------~v~~EspsNP~l~v~Dl~~i~~~a~~~g~  171 (386)
T PF01053_consen  108 YRLLEELLPRFGV---EVTFVDP-------TDLEALEAALRPNTK------LVFLESPSNPTLEVPDLEAIAKLAKEHGD  171 (386)
T ss_dssp             HHHHHHCHHHTTS---EEEEEST-------TSHHHHHHHHCTTEE------EEEEESSBTTTTB---HHHHHHHHHHTTT
T ss_pred             hhhhhhhhcccCc---EEEEeCc-------hhHHHHHhhccccce------EEEEEcCCCcccccccHHHHHHHHHHhCC
Confidence            4443    44688   8877754       389999999988554      8999999999999999999999999999 


Q ss_pred             CEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCc
Q 037144          264 IWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPK  341 (502)
Q Consensus       264 ~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~  341 (502)
                      ++++||.+++.....-| ...      +||.+.-+..|++++...  .|++.+++...+...+......+          
T Consensus       172 ~~~vVDnT~atp~~~~p-L~~------GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~~~----------  234 (386)
T PF01053_consen  172 ILVVVDNTFATPYNQNP-LEL------GADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFRRLL----------  234 (386)
T ss_dssp             -EEEEECTTTHTTTC-G-GGG------T-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHHHH----------
T ss_pred             ceEEeeccccceeeecc-CcC------CceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchhhhc----------
Confidence            99999999988754433 222      799999999999975532  56666666333322221111111          


Q ss_pred             ccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe-cC-----C----------
Q 037144          342 EQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA-FP-----R----------  405 (502)
Q Consensus       342 ~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~-~~-----~----------  405 (502)
                                   +-...+..+|..++  |.+-+..+++++.++|..+.+.|++.|.++-+ .|     |          
T Consensus       235 -------------G~~~~p~da~ll~r--gl~Tl~~R~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~  299 (386)
T PF01053_consen  235 -------------GATLSPFDAWLLLR--GLRTLPLRMERQNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMS  299 (386)
T ss_dssp             -------------T-B--HHHHHHHHH--HHTTHHHHHHHHHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCS
T ss_pred             -------------CccchHHHHHHHhc--CCCcHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeeccc
Confidence                         11124567777776  56788999999999999999999999998743 32     1          


Q ss_pred             -CeeEEEEEeec
Q 037144          406 -NFSLVCFRVTP  416 (502)
Q Consensus       406 -~~~~v~f~~~~  416 (502)
                       ..++++|.+..
T Consensus       300 g~ggl~sf~l~~  311 (386)
T PF01053_consen  300 GGGGLLSFELKG  311 (386)
T ss_dssp             SCTSEEEEEESS
T ss_pred             ccCceeEEEecc
Confidence             23588888865

Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....

>PRK02936 argD acetylornithine aminotransferase; Provisional

Probab=99.64  E-value=3.1e-13  Score=137.86  Aligned_cols=290  Identities=13%  Similarity=0.072  Sum_probs=166.7

Q ss_pred             HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH
Q 037144          115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI  194 (502)
Q Consensus       115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~  194 (502)
                      .+++.++.+++++..+.+         ..++++||++||..|+..++...    +    ++.+|......|-+..-+...
T Consensus        70 ~~~~~~la~~l~~~~~~~---------~~~~~~sG~~a~~~A~~~a~~~~----g----~~~vi~~~~~~Hg~~~~~~~~  132 (377)
T PRK02936         70 NSLQEEVASLLAENSAGD---------LVFFCNSGAEANEAALKLARKHT----G----KSKIVTFEQSFHGRTFGTMSA  132 (377)
T ss_pred             CHHHHHHHHHHHhcCCCC---------EEEEeCCcHHHHHHHHHHHHHhc----C----CCeEEEECCCcCCCcHHhhhc
Confidence            567778888888876542         47999999999999999887531    0    233555555667665555444


Q ss_pred             cCCCC---------CCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC----ChhHHHHHHHH
Q 037144          195 VGIDR---------KNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD----PLKPLCDVAKQ  261 (502)
Q Consensus       195 ~Glg~---------~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id----pl~eI~~i~~~  261 (502)
                      .|...         ..+..+|.       -|+++|++.+.+++      .+|++....+..|.+.    ++++|.++|++
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~~~~~~------~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~  199 (377)
T PRK02936        133 TGQEKIKEGFGPLLPGFTHVPF-------NDIKALKEVMNEEV------AAVMLEVVQGEGGVIPADPAFLQEVQTLCKK  199 (377)
T ss_pred             cCCccccccCCCCCCCceEeCC-------CCHHHHHHhccCCe------EEEEEecccCCCCCccCCHHHHHHHHHHHHH
Confidence            43210         01122221       17899999886433      3677776666666653    39999999999


Q ss_pred             hCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCc
Q 037144          262 FGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPK  341 (502)
Q Consensus       262 ~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~  341 (502)
                      ||+++++|.+|.++............++ ..|.++  +.|.++..+..|+++.+ +.. .+.+.... + .         
T Consensus       200 ~~~~lI~DEv~~g~g~~g~~~~~~~~~~-~~di~t--~sK~l~~G~~ig~v~~~-~~~-~~~~~~~~-~-~---------  263 (377)
T PRK02936        200 FGALLIIDEVQTGIGRTGTLFAYEQFGL-DPDIVT--VAKGLGNGIPVGAMIGK-KEL-GTAFGPGS-H-G---------  263 (377)
T ss_pred             cCCEEEEeccccCCCcCchhhHHHhhCC-CCcEEE--EcccccCCCccEEEEEc-HHH-HhhccCCC-C-C---------
Confidence            9999999999976432111111001122 356554  67999865567877654 322 22321110 0 0         


Q ss_pred             ccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEecCCCeeEEEEEeecC
Q 037144          342 EQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTS----DKRFEVAFPRNFSLVCFRVTPS  417 (502)
Q Consensus       342 ~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~----~~~~~l~~~~~~~~v~f~~~~~  417 (502)
                              .+. ++.+....++.++++.+.   ..+.+++..++.+++++.|++    .+.+.-+ .+...++.+.+.+.
T Consensus       264 --------~t~-~~~~~~~aaa~a~l~~~~---~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v-~~~g~~~~i~~~~~  330 (377)
T PRK02936        264 --------STF-GGNPLAMAAAKEVLQVIK---QPSFLEEVQEKGEYFLQKLQEELEHLECVKNI-RGKGLMIGIECTEE  330 (377)
T ss_pred             --------CCC-CCCHHHHHHHHHHHHHHH---hccHHHHHHHHHHHHHHHHHHHHhhCCcEEeE-eecceEEEEEecch
Confidence                    000 111112223333343331   234556666777777777765    3332222 12233444544321


Q ss_pred             cchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHH
Q 037144          418 AVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQE  497 (502)
Q Consensus       418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~  497 (502)
                                                    ...+.+.+.++|.++.+    .+..++|++.. ...++++|+++++.|++
T Consensus       331 ------------------------------~~~~~~~l~~~gv~v~~----~g~~~lRi~p~-~~~~~~~i~~~i~~l~~  375 (377)
T PRK02936        331 ------------------------------VAPVIEQLREEGLLVLS----AGPNVIRLLPP-LVVTKEELDQAVYLLKK  375 (377)
T ss_pred             ------------------------------HHHHHHHHHHCCeEEec----CCCCEEEEECC-cccCHHHHHHHHHHHHH
Confidence                                          34567777778865433    23468999964 33567799999999976


Q ss_pred             H
Q 037144          498 H  498 (502)
Q Consensus       498 ~  498 (502)
                      +
T Consensus       376 ~  376 (377)
T PRK02936        376 V  376 (377)
T ss_pred             h
Confidence            5

>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed

Probab=99.63  E-value=6.8e-13  Score=136.46  Aligned_cols=300  Identities=13%  Similarity=0.062  Sum_probs=169.0

Q ss_pred             HHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcC--
Q 037144          119 NIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVG--  196 (502)
Q Consensus       119 ~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~G--  196 (502)
                      .++.+.|+++.+.+         ..++++||++||..|+..+|.......+  ..++.+|......|-+...+..+.|  
T Consensus        85 ~~l~~~l~~~~~~~---------~~~~~~sGseA~e~a~klar~~~~~~~~--~~~~~ii~~~~~~HG~~~~~~~~~~~~  153 (403)
T PRK05093         85 LRLAKKLIDATFAE---------RVFFANSGAEANEAAFKLARRYACDRHG--PEKTEIIAFHNSFHGRTLFTVSVGGQP  153 (403)
T ss_pred             HHHHHHHHhhCCCC---------EEEEeCchHHHHHHHHHHHHHHHhhcCC--CCCCeEEEEcCCcCCchhhhHhhcCCh
Confidence            35556677766543         4799999999999999999876432111  1134566666667876554444322  


Q ss_pred             -----CC--CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHHHHHhCCE
Q 037144          197 -----ID--RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDVAKQFGIW  265 (502)
Q Consensus       197 -----lg--~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~~~~g~~  265 (502)
                           .+  ...++.+|.       -|++++++.+.++      +.+|++....+..|.+.|    +++|.++|++||++
T Consensus       154 ~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~------~aaiiiep~~~~gg~~~~~~~~l~~l~~l~~~~g~~  220 (403)
T PRK05093        154 KYSDGFGPKPADITHVPF-------NDLAAVKAVIDDH------TCAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNAL  220 (403)
T ss_pred             hhhhcCCCCCCCcEEeCC-------CCHHHHHHHhcCC------eEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence                 11  112333332       2789999888543      336666644444444433    99999999999999


Q ss_pred             EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCccccc
Q 037144          266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEV  345 (502)
Q Consensus       266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~  345 (502)
                      +++|.+|.+.............++ ..|.++  +.|.++..+..|+++.++. . .+.+...   ...            
T Consensus       221 lI~DEv~~g~g~~g~~~~~~~~~~-~pdi~s--~sK~l~~G~rig~vv~~~~-i-~~~l~~~---~~~------------  280 (403)
T PRK05093        221 LIFDEVQTGMGRTGDLFAYMHYGV-TPDILT--SAKALGGGFPIGAMLTTAE-I-ASHFKVG---THG------------  280 (403)
T ss_pred             EEEechhhCCCCCccchhhhhcCC-CCCEEE--ecccccCCcceEEEEEcHH-H-HhhcCCC---CCC------------
Confidence            999999986432211110001122 356554  4699986677888887543 2 2222110   000            


Q ss_pred             CCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEecC-CC-eeEEEEEeecCcchhh
Q 037144          346 GYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK-RFEVAFP-RN-FSLVCFRVTPSAVMDK  422 (502)
Q Consensus       346 ~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~-~~~l~~~-~~-~~~v~f~~~~~~~~~~  422 (502)
                          .+. ++.+.....+..+++.+-.   .+..++..++.++|.+.|+++. .+.++.. +. ..++.+.+.+..    
T Consensus       281 ----~t~-~~~~~~~~aa~a~L~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~~~~~l~~~~----  348 (403)
T PRK05093        281 ----STY-GGNPLACAVAEAVFDIINT---PEVLEGVKARRQRFVDGLQKINQKYGVFSEIRGMGLLIGAELKPQY----  348 (403)
T ss_pred             ----CCC-CCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCeEeEeeCceEEEEEecCcc----
Confidence                000 0111122222333434311   3455777888888888887751 1112111 12 223344443210    


Q ss_pred             hhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          423 LRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                                            .....++++.+.++|.++. +   .+..++|++++.. .++++|+++++.|.++.++
T Consensus       349 ----------------------~~~~~~~~~~l~~~Gv~v~-~---~g~~~lRl~~~~~-~~~~~i~~~~~~l~~~l~~  400 (403)
T PRK05093        349 ----------------------KGRARDFLNAAAEEGVMVL-V---AGPDVLRFAPSLV-IEEADIDEGLARFEKAVAK  400 (403)
T ss_pred             ----------------------hhHHHHHHHHHHHCCeEEe-c---CCCCEEEEeCCCC-CCHHHHHHHHHHHHHHHHH
Confidence                                  1124567778888886443 3   2446899987543 4677999999999987754

>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase

Probab=99.63  E-value=2.6e-13  Score=139.50  Aligned_cols=328  Identities=14%  Similarity=0.061  Sum_probs=188.2

Q ss_pred             HHHHHHHHHHhhcCC-----CCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHH
Q 037144           89 VAGIVGEMLSSGFNV-----VGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDR  163 (502)
Q Consensus        89 ~~~~~~~~l~~~~n~-----~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~  163 (502)
                      ++..+.+.+...+..     ....|...++...+.+.+++++.+. +++.+       ..++|+|+++++.. +..... 
T Consensus        47 ~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~-~~~~d-------~I~it~Ga~~al~~-l~~l~~-  116 (402)
T TIGR03542        47 LPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRG-RIDPE-------EIFISDGAKCDVFR-LQSLFG-  116 (402)
T ss_pred             CCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhc-CCCHH-------HEEECCCcHHHHHH-HHHhcC-
Confidence            344455554444322     1234655567778888888775332 45443       68999998887754 322211 


Q ss_pred             HHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCC-C-------CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccE
Q 037144          164 VLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGI-D-------RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPL  235 (502)
Q Consensus       164 ~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Gl-g-------~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~  235 (502)
                                +++.|++..+++..+...++..|+ |       ...++.+|+++.+++.+|.+.   .  .      .+.
T Consensus       117 ----------~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~---~--~------~~~  175 (402)
T TIGR03542       117 ----------SDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPE---E--P------KID  175 (402)
T ss_pred             ----------CCCEEEEeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCCccc---c--C------Cce
Confidence                      566788888899889999998887 1       115677787643334444321   0  1      134


Q ss_pred             EEEEecCCccccccCC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCC---CeeEEccCCcCC-CCCc
Q 037144          236 FLCATVGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECV---DSFSFNPHKWLF-TTLD  308 (502)
Q Consensus       236 ~Vv~t~gtt~~G~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~a---Dsi~~~~hK~l~-~p~~  308 (502)
                      +|+++.++|+||.+-+   +++|+++|++||+++++|.+|..+... +.....+..+...   -.++.++.|.++ ....
T Consensus       176 ~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~-~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlR  254 (402)
T TIGR03542       176 IIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISD-PSLPHSIFEIPGAKECAIEFRSFSKTAGFTGVR  254 (402)
T ss_pred             EEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccC-CCCCcchhhCCCCcccEEEEecCccccCCCCcc
Confidence            7777899999999966   888999999999999999999765431 1111111112221   133567999996 5566


Q ss_pred             ceEEEeeCchhhhhhh-cCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh---cHHHHHHHHHHHHH
Q 037144          309 CCCLWVKDPSCLLSTL-STNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF---GVANLRNFIRSHVG  384 (502)
Q Consensus       309 ~g~~~~r~~~~l~~~~-~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---g~~g~~~~~~~~~~  384 (502)
                      .|+++..+. ...... .....+......              +.   .....+...++...+   +...+.+.++.+.+
T Consensus       255 iG~~i~~~~-l~~~~~~~~~~~~~~~~~~--------------~~---~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~  316 (402)
T TIGR03542       255 LGWTVVPKE-LTYADGHSVIQDWERRQCT--------------KF---NGASYPVQRAAEAAYAGEGLQPILEAISYYME  316 (402)
T ss_pred             eEEEEecHH-HhhcchhhHHHHHHHHhhh--------------cc---cCCCHHHHHHHHHHHcCcchhHHHHHHHHHHH
Confidence            788776432 210000 000001000000              00   000122222333333   12335556677778


Q ss_pred             HHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh-cCcEEE
Q 037144          385 MAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV-SGKVFM  463 (502)
Q Consensus       385 la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~  463 (502)
                      .++++.+.|++. ++++..+...+.+++++++. .                         +  ..++.+.+.+ .|..+.
T Consensus       317 ~~~~~~~~L~~~-~~~~~~~~~~~f~~v~l~~~-~-------------------------~--~~~l~~~l~~~~gv~v~  367 (402)
T TIGR03542       317 NARILRKALEAA-GFKVYGGEHAPYLWVKTPEG-I-------------------------S--SWDFFDFLLYQYHVVGT  367 (402)
T ss_pred             HHHHHHHHHHhc-CceecCCCceeEEEEECCCC-C-------------------------C--HHHHHHHHHHhCCEEEe
Confidence            888899999886 67765333445566665431 1                         0  1346666664 466544


Q ss_pred             EeeeEC--CEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144          464 THAIVG--GIYVLRFAAGNSMTMESHVRAAWTVVQEH  498 (502)
Q Consensus       464 ~~~~~~--g~~~lR~~~~~~~t~~~di~~~~~~l~~~  498 (502)
                      ++..+.  +..++|+++..   ++++++++++.|+++
T Consensus       368 pg~~f~~~~~~~iRis~~~---~~~~l~~~l~~l~~~  401 (402)
T TIGR03542       368 PGSGFGPSGEGFVRFSAFG---KRENIVEACERIKEA  401 (402)
T ss_pred             CchhhCCCCCCEEEEEecC---CHHHHHHHHHHHHhh
Confidence            444332  35799999753   567899999888764

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).

>PRK02627 acetylornithine aminotransferase; Provisional

Probab=99.63  E-value=4.8e-13  Score=137.41  Aligned_cols=300  Identities=12%  Similarity=0.070  Sum_probs=167.7

Q ss_pred             HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEE-eCCCCchhHHHHHH
Q 037144          115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVY-SSDQTHCAFQKAAQ  193 (502)
Q Consensus       115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~-~s~~~H~s~~~aa~  193 (502)
                      .....++.++++++.|.+         ..++++||++|+..|+.+++...    +..+.++..|+ .....|.....+..
T Consensus        80 ~~~~~~la~~l~~~~~~~---------~v~~~~gg~eA~~~al~~a~~~~----~~~~~~~~~ii~~~~~yhg~~~~~~~  146 (396)
T PRK02627         80 IEPQEELAEKLVELSGMD---------KVFFCNSGAEANEAAIKLARKYG----HKKGIEKPEIITAENSFHGRTLATLS  146 (396)
T ss_pred             CHHHHHHHHHHHhhcCCC---------EEEECCCcHHHHHHHHHHHHHHh----cccCCCCCeEEEECCCcCcccHHHHH
Confidence            456667778888887763         47999999999999999887642    11111123344 44444544333333


Q ss_pred             HcCCCCCCEE---EEecCCCCCc----ccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc----CChhHHHHHHHHh
Q 037144          194 IVGIDRKNIR---AIKTTKSSSY----GLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV----DPLKPLCDVAKQF  262 (502)
Q Consensus       194 ~~Glg~~~v~---~v~~~~~~~~----~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i----dpl~eI~~i~~~~  262 (502)
                      ..+.   ...   ..+...  +.    ..|+++|++++.++      +.+|+++...+++|..    +.+++|.++|++|
T Consensus       147 ~~~~---~~~~~~~~~~~~--~~~~~~~~d~~~l~~~i~~~------~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~  215 (396)
T PRK02627        147 ATGQ---PKYQEGFEPLVE--GFIYVPFNDIEALKAAITDK------TAAVMLEPIQGEGGVNPADKEYLQALRELCDEN  215 (396)
T ss_pred             hcCC---ccccccCCCCCC--CceEeCCCCHHHHHHhcCCC------eEEEEEecccCCCCCccCCHHHHHHHHHHHHHc
Confidence            3332   111   111111  01    12899999988432      3467777667777732    3499999999999


Q ss_pred             CCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcc
Q 037144          263 GIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKE  342 (502)
Q Consensus       263 g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~  342 (502)
                      |+++++|.+|.++............++ ..|.++  +.|.++.....|+++.++. .. +.+...    ...        
T Consensus       216 ~~~lI~DE~~~g~g~~g~~~~~~~~~~-~pdi~t--~sK~~~~G~rig~~~~~~~-~~-~~~~~~----~~~--------  278 (396)
T PRK02627        216 GILLILDEVQTGMGRTGKLFAYQHYGI-EPDIMT--LAKGLGGGVPIGAVLAKEK-VA-DVFTPG----DHG--------  278 (396)
T ss_pred             CCEEEEechhcCCCccCceeeehhcCC-CCCEEE--EcchhhCCcccEEEEEcHH-HH-hccCCC----CCC--------
Confidence            999999999986532211000001122 356655  5699986677888887533 22 222110    000        


Q ss_pred             cccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEecCCCeeEEEEEeecCc
Q 037144          343 QEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD----KRFEVAFPRNFSLVCFRVTPSA  418 (502)
Q Consensus       343 ~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~----~~~~l~~~~~~~~v~f~~~~~~  418 (502)
                           .  +. +........+..+++.+..   .+..++..++.+++++.|.++    |.+..+ .....++.+.+... 
T Consensus       279 -----~--t~-~~~~~~~~aa~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~g~~~~i~~~~~-  345 (396)
T PRK02627        279 -----S--TF-GGNPLACAAALAVIEIIEE---EGLLENAAEVGEYLRAKLRELLEKYPGIKEV-RGLGLMIGIELDRP-  345 (396)
T ss_pred             -----C--CC-CCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHHhCCCeeee-ccCcEEEEEEecCc-
Confidence                 0  00 1111122223334433322   234555666666666666543    222222 22334455554211 


Q ss_pred             chhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144          419 VMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEH  498 (502)
Q Consensus       419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~  498 (502)
                                                   ..++.+++.++|.++ .+.   +..++|+++. ...++++|+++++.|+++
T Consensus       346 -----------------------------~~~~~~~l~~~Gv~v-~~~---~~~~lRi~~~-~~~~~~~i~~~~~~l~~~  391 (396)
T PRK02627        346 -----------------------------AAEIVKKALEKGLLI-NVT---GDNVLRLLPP-LIISKEEIDEAVDRLEEV  391 (396)
T ss_pred             -----------------------------HHHHHHHHHHCCeEE-eec---CCCEEEEECC-cccCHHHHHHHHHHHHHH
Confidence                                         246777787788654 332   2367999874 335677999999999988


Q ss_pred             HHhC
Q 037144          499 LEAF  502 (502)
Q Consensus       499 ~~~~  502 (502)
                      .+++
T Consensus       392 l~~~  395 (396)
T PRK02627        392 LKEL  395 (396)
T ss_pred             HHhh
Confidence            7653

>PRK13237 tyrosine phenol-lyase; Provisional

Probab=99.62  E-value=1.1e-12  Score=132.72  Aligned_cols=251  Identities=12%  Similarity=0.074  Sum_probs=155.8

Q ss_pred             CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCC
Q 037144          105 GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQT  184 (502)
Q Consensus       105 ~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~  184 (502)
                      -..|..+|.+.++|+.    +++++|.+.         .+.|++||.|+..+......           ++++|  +...
T Consensus        71 Dd~Yagd~s~~~LE~~----vAe~lG~e~---------aV~v~sGTaAl~ll~~l~v~-----------pGd~V--p~n~  124 (460)
T PRK13237         71 DEAYAGSRNFYHLEET----VQEYYGFKH---------VVPTHQGRGAENLLSRIAIK-----------PGQYV--PGNM  124 (460)
T ss_pred             chhhcCCCcHHHHHHH----HHHHHCCCe---------EEEeCCHHHHHHHHHHhCCC-----------CcCEE--CCcc
Confidence            3468889999999987    456777763         68899999998764222111           45554  6677


Q ss_pred             chhHHHH-HHHcCCCCCCEEEEecC--------CCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccc-c---cCC
Q 037144          185 HCAFQKA-AQIVGIDRKNIRAIKTT--------KSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAIT-A---VDP  251 (502)
Q Consensus       185 H~s~~~a-a~~~Glg~~~v~~v~~~--------~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G-~---idp  251 (502)
                      |.+-.++ +...|.   ..+-+..+        ...+|.||++.|+++|++...  ..+.+|.++..++..| .   .++
T Consensus       125 ~f~Tt~ahI~~~Ga---~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~--~~~~lV~a~itvn~~GGqpvs~~~  199 (460)
T PRK13237        125 YFTTTRYHQELNGG---IFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGA--ENIAYICLAVTVNLAGGQPVSMAN  199 (460)
T ss_pred             chHhhHHHHHhCCc---EEEeeecccccccccCCCCCCCcCHHHHHHHhccccC--CccCceEEEEecccCCCeeCCHHh
Confidence            8777666 566666   44333211        112589999999999985422  1223456666666664 3   357


Q ss_pred             hhHHHHHHHHhCCEEEeecccccccc-cC----ccchhhh------cCCCCCCeeEEccCCcCCCCCcceEEEeeCchhh
Q 037144          252 LKPLCDVAKQFGIWVHVDAAYAGSAC-IC----PEFRHFI------DGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCL  320 (502)
Q Consensus       252 l~eI~~i~~~~g~~lhVDaA~g~~~~-~~----~~~~~~~------~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l  320 (502)
                      +++|.++|++||+++|.|+|+..+.. ++    +.+...-      .-.+.+|.+++|+||.+.+|. .|++++++++..
T Consensus       200 m~~I~elA~~~Gl~Vi~DaAra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~-GG~i~t~D~eL~  278 (460)
T PRK13237        200 MRAVRELCDKHGIKVFFDATRCVENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNI-GGFLAMNDEELF  278 (460)
T ss_pred             HHHHHHHHHHcCCEEEEECcchhcChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCC-ceEEEECCHHHH
Confidence            89999999999999999999875522 22    1122110      012479999999999999875 577778887665


Q ss_pred             hhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 037144          321 LSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFE  400 (502)
Q Consensus       321 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~  400 (502)
                      ...-.....|-           +...++..   .+|...+++  ..+...-.   ...+++....+++|.+.|.+. |+.
T Consensus       279 ~~~r~~~~~~e-----------G~~tygg~---~grd~~alA--vgl~E~~~---~~y~~~ri~~~~~l~~~L~~~-Gvp  338 (460)
T PRK13237        279 DEAKELVVVYE-----------GMPSYGGM---AGRDMEAMA--IGIEESVQ---YEYIEHRVGQVRYLGEKLLAA-GVP  338 (460)
T ss_pred             HHHHHhccccC-----------CCcCCCCh---hhhHHHHHH--hHHHhhch---HHHHHHHHHHHHHHHHHHHHC-CCc
Confidence            44322222221           11111110   122222222  12222111   267777888899999999887 899


Q ss_pred             EecCCCe
Q 037144          401 VAFPRNF  407 (502)
Q Consensus       401 l~~~~~~  407 (502)
                      ++.|...
T Consensus       339 v~~p~gg  345 (460)
T PRK13237        339 IVEPVGG  345 (460)
T ss_pred             eecCCCc
Confidence            8865443

>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=99.62  E-value=2e-14  Score=139.93  Aligned_cols=340  Identities=12%  Similarity=0.071  Sum_probs=210.5

Q ss_pred             CCCcccccCCCCCCHHHHHHHHHHh-hcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHH
Q 037144           75 QSPNYFAYFPATSSVAGIVGEMLSS-GFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEAL  153 (502)
Q Consensus        75 ~~p~~~~~~~~~~~~~~~~~~~l~~-~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~  153 (502)
                      .+=+|+||-.+.........+.+.. .++......+  -+..+..+++.+.+++++|.++.        .+|. -|-..|
T Consensus       142 gSYNYLGFa~~~g~ca~~~~~~~~kygl~~css~~e--~G~~~~hkelE~l~A~f~g~e~a--------~vF~-mGf~TN  210 (519)
T KOG1357|consen  142 GSYNYLGFAQSVGPCAEASLKSFDKYGLSRCSSRHE--AGTTEEHKELEELVARFLGVEDA--------IVFS-MGFATN  210 (519)
T ss_pred             cccccccccccCCcCChHHHHHHHHhcccccccchh--cccHHHHHHHHHHHHHhcCCcce--------EEEe-cccccc
Confidence            3456778775543333333333322 2222222211  24567778888899999999874        2222 222223


Q ss_pred             HHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcC--
Q 037144          154 LCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAE--  231 (502)
Q Consensus       154 ~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g--  231 (502)
                      -+.+-+...           ++..|+..+..|.|+.-.|++.|.   .++....+       |+.+||+.|++....|  
T Consensus       211 s~~~p~l~~-----------~gsLIiSDelNHaSi~~GaRLSgA---tiRVfkHN-------dm~~LEr~Lrd~I~~gqP  269 (519)
T KOG1357|consen  211 SMNIPSLLG-----------KGSLIISDELNHASLITGARLSGA---TTRVFRHN-------DMQGLERLLRDAIVYGQP  269 (519)
T ss_pred             ccCcceeec-----------CCcceeeccccchheeccccccCc---eEEEEecC-------CHHHHHHHHHHHHhcCCC
Confidence            222222222           566778888999999999999999   99999865       7889999999876554  


Q ss_pred             -----CccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccC-----ccchhhhcCCCCCCeeEEccCC
Q 037144          232 -----LIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIC-----PEFRHFIDGVECVDSFSFNPHK  301 (502)
Q Consensus       232 -----~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~-----~~~~~~~~~~~~aDsi~~~~hK  301 (502)
                           .+.++|++-.-.++-|.++++.++.+++++|..+|++|+||..+++.-     .++.  -.+-+.+|.+...+-|
T Consensus       270 ~Thrp~kki~iivegiysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~--g~d~~dvDImMGtftK  347 (519)
T KOG1357|consen  270 KTHRPWKKILICVEGIYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYF--GVDPEDVDIMMGTFTK  347 (519)
T ss_pred             CcCCcchheeeeeccceeccCeecccHHHHHhhccccEEEEeeccccccccCCCCcceeecc--CCCchhheeecceehh
Confidence                 223566666667789999999999999999999999999998887631     1111  1123478899888999


Q ss_pred             cCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh----cHHHHHH
Q 037144          302 WLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF----GVANLRN  377 (502)
Q Consensus       302 ~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~----g~~g~~~  377 (502)
                      .+++   +|..+..++.. .+.+.....+.....                 ..+ +.-+-....+++.+    |.++.++
T Consensus       348 Sfga---~GGyiagsk~l-id~lrt~s~~~~yat-----------------~~s-ppvaqq~~ssl~~i~G~dgt~~g~~  405 (519)
T KOG1357|consen  348 SFGA---AGGYIAGSKEL-IDYLRTPSPSALYAT-----------------SLS-PPVAQQILTSVKHIMGEDGTNRGRQ  405 (519)
T ss_pred             hccc---ccceecCcHHH-HhhhccCCCceeecc-----------------cCC-hHHHHHHHHHHHhhcCCCcccHHHH
Confidence            8863   44444434433 333322222211110                 001 01122334455543    4566788


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh
Q 037144          378 FIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV  457 (502)
Q Consensus       378 ~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~  457 (502)
                      .+++..+++++|+..+++. ||.+.+...++++..-+.+...                            +..+.++|.+
T Consensus       406 k~~~l~~ns~yfr~~l~~~-gfivyG~~dSpVvplll~~~~k----------------------------~~~f~r~~l~  456 (519)
T KOG1357|consen  406 KIERLAENSRYFRWELQKM-GFIVYGNNDSPVVPLLLYGPAK----------------------------IVAFSREMLE  456 (519)
T ss_pred             HHHHHHhhhHHHHHhhhcC-cEEEecCCCCCcceeeecCccc----------------------------ccHHHHHHHh
Confidence            9999999999999999987 8999887666666555443311                            1233334444


Q ss_pred             cCcEE--EEeee-ECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144          458 SGKVF--MTHAI-VGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       458 ~g~~~--~~~~~-~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~  500 (502)
                      ++..+  +.++. .--....|+|....+|.| +++++++.+.++.+
T Consensus       457 ~nigvVvvgfPatpl~e~r~R~c~Sa~ht~e-~ld~~l~~i~~~g~  501 (519)
T KOG1357|consen  457 RNIGVVVVGFPATPLLESRARFCLSASHTKE-DLDRALEVIDRVGD  501 (519)
T ss_pred             cCceEEEEeCCCchHHHhHHHhhhcccccHH-HHHHHHHHHhhhch
Confidence            44432  22221 111235799987666655 99999999988754

>PLN02624 ornithine-delta-aminotransferase

Probab=99.61  E-value=1.6e-12  Score=135.70  Aligned_cols=307  Identities=10%  Similarity=0.012  Sum_probs=170.5

Q ss_pred             HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcC
Q 037144          117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVG  196 (502)
Q Consensus       117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~G  196 (502)
                      ...++.+.|++++|.+         ..+|+++|++||..|+..||.......+....+..+|..+...|-...-+..+.|
T Consensus       118 ~~~~la~~L~~~~~~~---------~~~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~  188 (474)
T PLN02624        118 KFPEFAEYLTSMFGYD---------MVLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSC  188 (474)
T ss_pred             HHHHHHHHHHhhcCCC---------eEEEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCC
Confidence            3344556666777653         4789999999999999999875322111100012234444334533222222222


Q ss_pred             CC---------CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHHHHHhC
Q 037144          197 ID---------RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDVAKQFG  263 (502)
Q Consensus       197 lg---------~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~~~~g  263 (502)
                      -.         ...+..+|.       -|++.|++.++.   .+....+|++....+++|.+-|    |++|.++|++||
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~---~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~g  258 (474)
T PLN02624        189 DNEATRGFGPLLPGHLKVDF-------GDLDALEKIFEE---DGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHN  258 (474)
T ss_pred             CccccccCCCCCCCceEeCC-------CCHHHHHHHHHh---CCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcC
Confidence            10         012233332       278999998863   2234567888888889999877    999999999999


Q ss_pred             CEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCcccccCccCCCCCcc
Q 037144          264 IWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKE  342 (502)
Q Consensus       264 ~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~  342 (502)
                      +++++|.+|.|.......+.....++ ..|.++++  |.++.+ ..+|.++.++ ... ..+...  ....         
T Consensus       259 illI~DEv~tG~GrtG~~~a~~~~~i-~pDiv~ls--K~lggG~~pigav~~~~-~i~-~~~~~~--~~~~---------  322 (474)
T PLN02624        259 VLMIADEIQTGLARTGKMLACDWEEV-RPDVVILG--KALGGGVIPVSAVLADK-DVM-LCIKPG--EHGS---------  322 (474)
T ss_pred             CEEEEeccccCcCcCcchhhHHhcCC-CCCEEEec--ccccCCCCcceeeeecH-HHH-hHhccC--CcCC---------
Confidence            99999999976422111111111233 57888874  988766 4678877653 222 122110  0000         


Q ss_pred             cccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----CC-eEEecCCCeeEEEEEeecC
Q 037144          343 QEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD----KR-FEVAFPRNFSLVCFRVTPS  417 (502)
Q Consensus       343 ~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~----~~-~~l~~~~~~~~v~f~~~~~  417 (502)
                              ++ ++.+.......++++.+..+   ++.++..++.++|++.|+++    |. +.-+ .+...++.+.+...
T Consensus       323 --------T~-~g~pl~~aaa~aaLe~l~~~---~l~~~~~~~~~~l~~~L~~l~~~~~~~i~~v-rg~G~~~~i~l~~~  389 (474)
T PLN02624        323 --------TF-GGNPLASAVAMAALQVVQDE---KLAERSAKLGQELRDQLQKIQKQFPKLIKEV-RGRGLLNAVVLNSP  389 (474)
T ss_pred             --------CC-CCCHHHHHHHHHHHHHHHhc---hHHHHHHHHHHHHHHHHHHHHHhCCCceEEE-EeeEEEEEEEecCC
Confidence                    00 11111222333444443222   34455666677777766553    32 2212 12233444444221


Q ss_pred             cchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHH
Q 037144          418 AVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQE  497 (502)
Q Consensus       418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~  497 (502)
                      ..                    .    .....++.+.|.++|.+ +.+.   +..+||++.. ...++++|+++++.|++
T Consensus       390 ~~--------------------~----~~~a~~~~~~L~e~GV~-v~p~---~~~~lR~~p~-l~~t~e~id~~l~~L~~  440 (474)
T PLN02624        390 KL--------------------G----PVSAYDVCLKLKERGLL-AKPT---HDTIIRLAPP-LSISEDELQECSKALSD  440 (474)
T ss_pred             Cc--------------------C----hHHHHHHHHHHHhCCeE-EecC---CCCEEEEECC-ccCCHHHHHHHHHHHHH
Confidence            00                    0    12235677778778864 4332   3568999974 45677899999999988


Q ss_pred             HHH
Q 037144          498 HLE  500 (502)
Q Consensus       498 ~~~  500 (502)
                      +.+
T Consensus       441 ~l~  443 (474)
T PLN02624        441 VLE  443 (474)
T ss_pred             HHH
Confidence            765

>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]

Probab=99.61  E-value=2.5e-13  Score=131.23  Aligned_cols=255  Identities=13%  Similarity=0.077  Sum_probs=171.7

Q ss_pred             cccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeC---CCC
Q 037144          108 WISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSS---DQT  184 (502)
Q Consensus       108 ~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s---~~~  184 (502)
                      |....-..++|..+++..+++||++-.        -+=..||+.||+.+..+..+           |++.|+.-   .-+
T Consensus        64 YgGce~VD~vE~laierak~LFga~~a--------nVQPhSGs~AN~av~~All~-----------pGDtimgm~l~~GG  124 (413)
T COG0112          64 YGGCEYVDEVEELAIERAKKLFGAEYA--------NVQPHSGSQANQAVYLALLQ-----------PGDTIMGLDLSHGG  124 (413)
T ss_pred             cCCCeeHHHHHHHHHHHHHHHhCCCcc--------ccCCCCchHHHHHHHHHHcC-----------CCCeEecccCCCCC
Confidence            455566789999999999999998743        13345789999877666554           66666643   334


Q ss_pred             chhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCC
Q 037144          185 HCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGI  264 (502)
Q Consensus       185 H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~  264 (502)
                      |.+.-.-....|.- =+++..++|.+ ++.+|.|++++.+.+.+     |.+|++  |.+..-..-|++++.+||++.|+
T Consensus       125 HltHg~~v~~sG~~-~~~v~Y~vd~e-t~~IDyD~~~k~a~e~k-----PK~ii~--G~SaY~r~id~~~~reIad~VGA  195 (413)
T COG0112         125 HLTHGSPVNFSGKL-FNVVSYGVDPE-TGLIDYDEVEKLAKEVK-----PKLIIA--GGSAYSRPIDFKRFREIADEVGA  195 (413)
T ss_pred             cccCCCCCCcccee-EEeEecccccc-cCccCHHHHHHHHHHhC-----CCEEEE--CccccccccCHHHHHHHHHHhCc
Confidence            54444222333331 05666677753 68999999999987753     666654  55566677899999999999999


Q ss_pred             EEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccc
Q 037144          265 WVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQE  344 (502)
Q Consensus       265 ~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~  344 (502)
                      +|.+|.||-.+......+..   -++.||++|.+.||+|.+|. .|++++++.+...... ..   ++.           
T Consensus       196 ~L~~DmAHiaGLVA~G~~p~---P~~~AdvVTtTTHKTlrGPr-GG~Il~~~eel~kkin-~a---VFP-----------  256 (413)
T COG0112         196 YLMVDMAHVAGLIAGGVHPN---PLPHADVVTTTTHKTLRGPR-GGIILTNDEELAKKIN-SA---VFP-----------  256 (413)
T ss_pred             eEEehHHHHHHHHhcccCCC---CCCccceEeCCcccCCCCCC-ceEEEeccHHHHHHhh-hh---cCC-----------
Confidence            99999999766654433332   24489999999999999996 5677777644332211 11   111           


Q ss_pred             cCCCcccccCCCCCC-chHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-CCeeEEEEEeec
Q 037144          345 VGYKDWQITLCRRFR-SLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP-RNFSLVCFRVTP  416 (502)
Q Consensus       345 ~~~~~~~~~~sr~~~-al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~-~~~~~v~f~~~~  416 (502)
                            +.+++-... ..+...+++.....++++..++..++|+.|.+.|.+. |+.++.- .+..++.+.+.+
T Consensus       257 ------g~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~-G~~vvsGgTdnHl~lVDl~~  323 (413)
T COG0112         257 ------GLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKER-GFKVVSGGTDNHLVLVDLRS  323 (413)
T ss_pred             ------ccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHc-CCeEecCCccceEEEEEccc
Confidence                  111111111 2233455665567788999999999999999999996 8999852 234455555543

>PRK03715 argD acetylornithine transaminase protein; Provisional

Probab=99.61  E-value=7.6e-13  Score=135.15  Aligned_cols=308  Identities=12%  Similarity=0.028  Sum_probs=179.8

Q ss_pred             HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH
Q 037144          115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI  194 (502)
Q Consensus       115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~  194 (502)
                      .+.+.++.+++++..+.+         ..+|++||++||..|+..+|.... + +.. .+..+|......|-+..-++..
T Consensus        77 ~~~~~~la~~l~~~~~~~---------~v~f~~SGseA~e~Aik~ar~~~~-~-~~~-~r~~ii~~~~~yHG~t~~~~~~  144 (395)
T PRK03715         77 NEPMAKLAGLLTQHSCFD---------KVFFANSGAEANEGAIKLARKWGR-K-HKN-GAYEIITFDHSFHGRTLATMSA  144 (395)
T ss_pred             CHHHHHHHHHHhhccCCC---------EEEEeCCcHHHHHHHHHHHHHHhh-c-cCC-CCcEEEEECCCcCCChHHHHhh
Confidence            556777788888765432         479999999999999999986421 1 101 1244566666678887777766


Q ss_pred             cCCCCCCEEEEecCCCC--CcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHHHHHhCCEEEe
Q 037144          195 VGIDRKNIRAIKTTKSS--SYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDVAKQFGIWVHV  268 (502)
Q Consensus       195 ~Glg~~~v~~v~~~~~~--~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~~~~g~~lhV  268 (502)
                      .|...-.....|...+-  .-..|+++|++.+.+.      ..+|++.......|.+-|    +++|.++|++||+++++
T Consensus       145 s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~  218 (395)
T PRK03715        145 SGKPGWDTIFAPQVPGFPKAELNDIASVEKLITDK------TVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIV  218 (395)
T ss_pred             cCCcccccCCCCCCCCceeeCCchHHHHHHHcCCC------ceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence            65411011111111100  0024788999888532      347777777777888877    99999999999999999


Q ss_pred             ecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCC
Q 037144          269 DAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYK  348 (502)
Q Consensus       269 DaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~  348 (502)
                      |.++.|+.-...-+.....++ ..|.++++  |.++..++.|.++.+++-.   .+  .+.+..+               
T Consensus       219 DEv~tG~GRtG~~~a~~~~gv-~PDi~t~g--K~lg~G~p~~av~~~~~i~---~~--~~~~~~~---------------  275 (395)
T PRK03715        219 DEVQTGCGRTGTLFAYELSGI-EPDIMTLG--KGIGGGVPLAALLAKAEVA---VF--EAGDQGG---------------  275 (395)
T ss_pred             eccccCCCCCcchhhHhhcCC-CCceeeeh--hhhhCCcceEEEEEccccc---cc--cCCCcCC---------------
Confidence            999986422211111111233 57887775  9998767788887765421   11  1111110               


Q ss_pred             cccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCeEEecCCCeeEEEEEeecCcchhhhhh
Q 037144          349 DWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD---KRFEVAFPRNFSLVCFRVTPSAVMDKLRT  425 (502)
Q Consensus       349 ~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~---~~~~l~~~~~~~~v~f~~~~~~~~~~~~~  425 (502)
                        |+ .+.+..+....+++..+..   .+++++..++.++|++.|+++   .++.-+ .-...++.+.+....       
T Consensus       276 --T~-~g~pl~~aaala~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~i~~v-rG~Glm~~i~l~~~~-------  341 (395)
T PRK03715        276 --TY-NGNPLMTAVGVAVISQLLA---PGFLEGVRARGEYLKEKLLELSEERGLEGE-RGEGLLRALLLGKDI-------  341 (395)
T ss_pred             --CC-CCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHhhcCCcCeE-EcceeEEEEEecCch-------
Confidence              11 1112233344455555532   356778888888888888753   123212 122344555543210       


Q ss_pred             cccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          426 KYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       426 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                                         .....+...++.++|.+. ...   +...||++.. ...++++|+++++.|+++.++
T Consensus       342 -------------------~~~~~~~~~~~~~~Gi~~-~~~---~~~~lR~~p~-l~~t~~ei~~~~~~l~~~l~~  393 (395)
T PRK03715        342 -------------------GPQIVEKARDMQPDGLLL-NAP---RPNLLRFMPA-LNVTTEEIDQMIAMLRSVLDK  393 (395)
T ss_pred             -------------------HHHHHHHHHhccCCCEEE-eec---CCCEEEEeCC-cccCHHHHHHHHHHHHHHHHh
Confidence                               011112223333447543 221   2357999975 557777999999999988765

>PRK07049 methionine gamma-lyase; Validated

Probab=99.60  E-value=6.5e-13  Score=136.77  Aligned_cols=225  Identities=12%  Similarity=0.106  Sum_probs=153.8

Q ss_pred             cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144          110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ  189 (502)
Q Consensus       110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~  189 (502)
                      ..|....+|+.    ++++.|.+         ..++++||+.|+..++.+..+           +++.|+++...+....
T Consensus        81 ~~Pt~~~Le~~----lA~leg~~---------~~iv~~sG~~Ai~~~l~al~~-----------~Gd~Vv~~~p~Y~~~~  136 (427)
T PRK07049         81 NHPNSEIVEDR----LAVYEGAE---------SAALFSSGMSAIATTLLAFVR-----------PGDVILHSQPLYGGTE  136 (427)
T ss_pred             CCcCHHHHHHH----HHHHhCCC---------cEEEEccHHHHHHHHHHHHhC-----------CCCEEEEcCCCcccHH
Confidence            34555666655    66777744         468899999887766655543           6778888888887665


Q ss_pred             HH----HHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHH----
Q 037144          190 KA----AQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQ----  261 (502)
Q Consensus       190 ~a----a~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~----  261 (502)
                      ..    +...|+   +++.++.      ..|+++|+++|.+..++ ..+.+|++..++|++|.+-|+++|.+++++    
T Consensus       137 ~~~~~~l~~~Gi---~~v~~~~------~~d~~~l~~~l~~~~~~-~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~  206 (427)
T PRK07049        137 TLLAKTFRNFGV---GAVGFAD------GLSEAAIGAAAEAAAAK-GRVSLILIETPANPTNSLVDVAAVRRVADAIEAR  206 (427)
T ss_pred             HHHHHHHHhcCc---EEEEEeC------CCCHHHHHHHHHhhccC-CCceEEEEECCCCCCCcccCHHHHHHHHHHhhhc
Confidence            54    345687   7777762      25788899888654322 134588888999999999999999999988    


Q ss_pred             --hCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCC-C-CcceEEEeeCchhhhhhhcCCcccccCccCC
Q 037144          262 --FGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFT-T-LDCCCLWVKDPSCLLSTLSTNPQYLKNEATD  337 (502)
Q Consensus       262 --~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~-p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~  337 (502)
                        ++++++||.+|.+.....| ..      .++|.++.+++|++++ + ...|++ +.++.... .+......+      
T Consensus       207 ~~~~~~vvvDety~~~~~~~p-l~------~g~divv~S~SK~~gG~~glr~G~v-v~~~~l~~-~l~~~~~~~------  271 (427)
T PRK07049        207 QGHRPIIACDNTLLGPVFQKP-LE------HGADLSVYSLTKYVGGHSDLVAGAV-LGRKALIR-QVRALRSAI------  271 (427)
T ss_pred             ccCCCEEEEECCccccccCCc-cc------cCCCEEEEcCceeecCCCCcEEEEE-ECCHHHHH-HHHHHHHhc------
Confidence              8999999999876543221 11      1689999999999984 3 234544 44444322 221110111      


Q ss_pred             CCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144          338 QEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA  402 (502)
Q Consensus       338 ~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~  402 (502)
                                       +.....+..|++++.+  +.+..++++..++++.+.+.|+++|+++-+
T Consensus       272 -----------------g~~ls~~~a~l~~r~L--~tl~~R~~~~~~~a~~la~~L~~~p~V~~v  317 (427)
T PRK07049        272 -----------------GTQLDPHSCWMLGRSL--ETLVLRMERANRNARAVAEFLRDHPKVEKL  317 (427)
T ss_pred             -----------------CCCCCHHHHHHHHcCC--ChHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence                             1112456677777655  567888899999999999999999987643

>PRK05664 threonine-phosphate decarboxylase; Reviewed

Probab=99.59  E-value=9.7e-13  Score=131.58  Aligned_cols=269  Identities=11%  Similarity=0.012  Sum_probs=168.1

Q ss_pred             HHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCC
Q 037144          120 IVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDR  199 (502)
Q Consensus       120 ~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~  199 (502)
                      .+++.+++.+|.+         ..++|+|+++++...+. + .           +++.|++..+++..+...++.+|+  
T Consensus        53 ~Lr~~ia~~~~~~---------~I~it~Gs~~al~~~~~-~-~-----------~gd~v~v~~P~y~~~~~~~~~~g~--  108 (330)
T PRK05664         53 GLEAAARAYYGAP---------QLLPVAGSQAAIQALPR-L-R-----------APGRVGVLSPCYAEHAHAWRRAGH--  108 (330)
T ss_pred             HHHHHHHHHhCCC---------CEEECcCHHHHHHHHHH-c-c-----------CCCEEEEcCCChHHHHHHHHHcCC--
Confidence            3456677777753         48899999988755432 1 1           677888999999999999999999  


Q ss_pred             CCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hhHHHHHHHHhCCEEEeeccccccc
Q 037144          200 KNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSA  276 (502)
Q Consensus       200 ~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~eI~~i~~~~g~~lhVDaA~g~~~  276 (502)
                       +++.||++          +++++++ .+      .+|+.+.++|+||.+-+   +++|+++|+++|+++++|.+|..+.
T Consensus       109 -~~~~v~~~----------~~~~~~~-~~------~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~  170 (330)
T PRK05664        109 -QVRELDEA----------EVEAALD-SL------DVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNT  170 (330)
T ss_pred             -eEEEechh----------hHhhhhc-CC------CEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccCC
Confidence             99988763          3444443 11      25777889999999965   5666667789999999999996442


Q ss_pred             ccCccchhhhcCCCCC-C-eeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCccccc
Q 037144          277 CICPEFRHFIDGVECV-D-SFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQIT  353 (502)
Q Consensus       277 ~~~~~~~~~~~~~~~a-D-si~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~  353 (502)
                       ..+...    .+..- . .++.+++|.++ ....+|+++. ++............+.                      
T Consensus       171 -~~~s~~----~~~~~~~vi~~~SfSK~~gl~GlRiG~~v~-~~~l~~~~~~~~~~~~----------------------  222 (330)
T PRK05664        171 -PQHSLA----ACAHRPGLIVLRSFGKFFGLAGARLGFVLA-EPALLRALAELLGPWT----------------------  222 (330)
T ss_pred             -Cccccc----ccccCCCEEEEeeccccccCCCcceEEEEe-CHHHHHHHHHhcCCCC----------------------
Confidence             111111    11122 2 45667999997 5567788776 3433322211111110                      


Q ss_pred             CCCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCc
Q 037144          354 LCRRFRSLKLWVVIRNFG-VANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTY  432 (502)
Q Consensus       354 ~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~  432 (502)
                          ...+..+++...+. .+..+...++..+.++++.+.|++. +++.. ......+.++. +.               
T Consensus       223 ----~~~~~~~~~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~-~~~~~f~~~~~-~~---------------  280 (330)
T PRK05664        223 ----VSGPTRWLAQAALADTPWQRRQRERLLAASQRLAALLRRH-GLTPA-GGCALFQWVRT-ED---------------  280 (330)
T ss_pred             ----CCHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHC-CCccc-CCcceEEEEec-CC---------------
Confidence                01222233333332 2344566777788889999999887 55421 11122333332 21               


Q ss_pred             ccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          433 DQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       433 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                                     ..++.+.+.++|..+..   +....++|++++.   +.++++++.++|+++.++
T Consensus       281 ---------------~~~~~~~l~~~gi~v~~---f~~~~~iRis~~~---~~~~~~~l~~al~~~~~~  328 (330)
T PRK05664        281 ---------------AAALHEFLARRGILTRL---FEQPASLRFGLPA---DEADWARLDQALLAYRKE  328 (330)
T ss_pred             ---------------HHHHHHHHHHCCeEEEE---CCCCCeEEEECCC---CHHHHHHHHHHHHHHHhh
Confidence                           24566777777876532   2344689999863   456899999999887653

>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional

Probab=99.59  E-value=1.2e-12  Score=134.61  Aligned_cols=299  Identities=12%  Similarity=0.042  Sum_probs=168.8

Q ss_pred             HHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCC
Q 037144          119 NIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGID  198 (502)
Q Consensus       119 ~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg  198 (502)
                      .++.+.|+++++.+         ..+|++||++||..|+..||.....+ +..+ +..++......|-+..-+..+.|-.
T Consensus        84 ~~la~~l~~~~~~~---------~v~~~~sGseA~e~Alk~ar~~~~~~-~~~~-r~~ii~~~~~yHG~t~~~~~~~~~~  152 (406)
T PRK12381         84 LRLAKKLIDATFAD---------RVFFCNSGAEANEAALKLARKYAHDR-YGSH-KSGIVAFKNAFHGRTLFTVSAGGQP  152 (406)
T ss_pred             HHHHHHHHhhCCCC---------eEEEcCCcHHHHHHHHHHHHHHHhhc-CCCC-CCeEEEECCCcCCcchhHHhhcCCc
Confidence            34556666766542         47999999999999999998753211 1000 2334445555666555444444321


Q ss_pred             C---------CCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc-----cCChhHHHHHHHHhCC
Q 037144          199 R---------KNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA-----VDPLKPLCDVAKQFGI  264 (502)
Q Consensus       199 ~---------~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~-----idpl~eI~~i~~~~g~  264 (502)
                      .         ..+..+|       ..|+++|++.+.++      +.+|++.. ...+|.     .+.+++|.++|++||+
T Consensus       153 ~~~~~~~~~~~~~~~~~-------~~d~~~l~~~l~~~------~aaviiEP-v~~~gg~~~~~~~~l~~l~~l~~~~~~  218 (406)
T PRK12381        153 KYSQDFAPLPPDIRHAA-------YNDLNSASALIDDQ------TCAVIVEP-IQGEGGVIPADKAFLQGLRELCDRHNA  218 (406)
T ss_pred             ccccCCCCCCCCeeEeC-------CCCHHHHHHhccCC------eeEEEEeC-CcCCCCCcCCCHHHHHHHHHHHHHcCC
Confidence            0         0122222       23789999888542      33566654 444443     3679999999999999


Q ss_pred             EEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccc
Q 037144          265 WVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQE  344 (502)
Q Consensus       265 ~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~  344 (502)
                      ++++|.+|.+.......+.....++ ..|.++  ..|.++..+..|.++.++. . .+.+...   ...           
T Consensus       219 llI~DEv~tG~gr~G~~~~~~~~~v-~pDi~t--~sK~l~gG~~ig~~~~~~~-~-~~~~~~~---~~~-----------  279 (406)
T PRK12381        219 LLIFDEVQTGVGRTGELYAYMHYGV-TPDVLT--TAKALGGGFPIGAMLTTEK-C-ASVMTVG---THG-----------  279 (406)
T ss_pred             EEEEcchhhCCCCCcchhhhHhhCC-CCCEEE--ehhhhhCCCceEEEEEcHH-H-HhhcCCC---CCC-----------
Confidence            9999999966532221111111233 367654  4699976677888877543 2 2222211   000           


Q ss_pred             cCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEecCC-C-eeEEEEEeecCcchh
Q 037144          345 VGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK-RFEVAFPR-N-FSLVCFRVTPSAVMD  421 (502)
Q Consensus       345 ~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~-~~~l~~~~-~-~~~v~f~~~~~~~~~  421 (502)
                           .++ ++.+.....+.++++.+.   -.++.++..++.++|.+.|+++. .+.++... . ..++.+.+.+..   
T Consensus       280 -----~t~-~~~pl~~aaa~a~l~~l~---~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~Gl~~~~~l~~~~---  347 (406)
T PRK12381        280 -----TTY-GGNPLASAVAGKVLELIN---TPEMLNGVKQRHDWFVERLNTINARYGLFSEIRGLGLLIGCVLNAEY---  347 (406)
T ss_pred             -----CCC-CCCHHHHHHHHHHHHHHh---hccHHHHHHHHHHHHHHHHHHHHhhCCCEEEEecCeEEEEEEecCch---
Confidence                 001 111222233334444442   23567788888899988887751 12222111 1 223344332210   


Q ss_pred             hhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          422 KLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                                             ......+.+.+.++|.++. +   .+..++|+++. ...++++|+++++.|.++.++
T Consensus       348 -----------------------~~~~~~~~~~l~~~Gv~v~-~---~g~~~lRl~p~-~~~t~~~i~~~~~~l~~~l~~  399 (406)
T PRK12381        348 -----------------------AGKAKQISQEAAKAGVMVL-I---AGPNVVRFAPA-LNISEEEITTGLDRFARACER  399 (406)
T ss_pred             -----------------------hhHHHHHHHHHHHCCcEEe-e---CCCCEEEEeCC-ccCCHHHHHHHHHHHHHHHHH
Confidence                                   1124567788888897543 2   13458999975 335677999999999887654

>PRK06959 putative threonine-phosphate decarboxylase; Provisional

Probab=99.58  E-value=1e-12  Score=131.78  Aligned_cols=272  Identities=11%  Similarity=0.032  Sum_probs=169.8

Q ss_pred             HHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCC
Q 037144          119 NIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGID  198 (502)
Q Consensus       119 ~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg  198 (502)
                      .++++++++.+|.++..      ..++|+|+++++. .+..+..           ++. |++..+++..+..+++..|+ 
T Consensus        56 ~~L~~~ia~~~~~~~~~------~I~i~~Gs~e~i~-~l~~~~~-----------~g~-v~v~~P~y~~y~~~~~~~g~-  115 (339)
T PRK06959         56 DGLAACAARYYGAPDAA------HVLPVAGSQAAIR-ALPALLP-----------RGR-VGIAPLAYSEYAPAFARHGH-  115 (339)
T ss_pred             HHHHHHHHHHhCCCCcc------cEEECcCHHHHHH-HHHHhcC-----------CCe-EEEcCCCcHHHHHHHHHCCC-
Confidence            46778899999997421      5888998888764 3322211           444 55677888889999999999 


Q ss_pred             CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHH---HHHhCCEEEeecccccc
Q 037144          199 RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDV---AKQFGIWVHVDAAYAGS  275 (502)
Q Consensus       199 ~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i---~~~~g~~lhVDaA~g~~  275 (502)
                        +++.+|.+.        +.+++    ..      .+|+++.++|+||.+-+.+++.++   |++++.|+++|.+|..+
T Consensus       116 --~~~~v~~~~--------~~~~~----~~------~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~  175 (339)
T PRK06959        116 --RVVPLDEAA--------DTLPA----AL------THLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADT  175 (339)
T ss_pred             --EEEeecccc--------hhccc----cC------CEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccC
Confidence              888887652        12211    11      167888899999999766665554   56789999999999765


Q ss_pred             cccCccchhhhcCCCCCC-eeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCccccc
Q 037144          276 ACICPEFRHFIDGVECVD-SFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQIT  353 (502)
Q Consensus       276 ~~~~~~~~~~~~~~~~aD-si~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~  353 (502)
                      ... +......   ..-. .+.-++.|.++ ....+|+++.. +............|                    .  
T Consensus       176 ~~~-~s~~~~~---~~~~vi~l~SfSK~~gl~GlRiGy~v~~-~~li~~l~~~~~~~--------------------~--  228 (339)
T PRK06959        176 LPA-ASLAAHT---DRPGLVVLRSVGKFFGLAGVRAGFVLAA-PALLAALRDALGAW--------------------T--  228 (339)
T ss_pred             CCc-ccchhcc---CCCCEEEEecChhhcCCcchheEEEecC-HHHHHHHHHhcCCC--------------------C--
Confidence            321 2111111   1112 45567999997 55677887763 43332221111111                    0  


Q ss_pred             CCCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCc
Q 037144          354 LCRRFRSLKLWVVIRNFG-VANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTY  432 (502)
Q Consensus       354 ~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~  432 (502)
                          ...+...++...+. .+..++..++..+.++++.+.|+++ ++++.  +..+.+.++. +.               
T Consensus       229 ----vs~~~q~a~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~--~~~~f~~~~~-~~---------------  285 (339)
T PRK06959        229 ----VSGPARHAVRAAFADAAWQAAMRERLAADGARLAALLRAH-GFAVH--ATPLFSWTDD-PR---------------  285 (339)
T ss_pred             ----CcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCCcc--CcceEEEEeC-CC---------------
Confidence                02233334444442 3445666778888899999999987 67664  2222333332 11               


Q ss_pred             ccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          433 DQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       433 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                                     ..++.+.|.++|..+- .  +....++|++++   .+.+++++++++|+++.+.
T Consensus       286 ---------------~~~l~~~l~~~GI~vr-~--~~~~~~lRisi~---~~~~e~~~l~~al~~~~~~  333 (339)
T PRK06959        286 ---------------AAALHAALARRGIWTR-Y--FAPPPSVRFGLP---ADEAEWQRLEDALAECVPT  333 (339)
T ss_pred             ---------------HHHHHHHHHhCCeEEE-E--CCCCCeEEEECC---CCHHHHHHHHHHHHHHHHH
Confidence                           2457777888887543 2  233458999974   2456999999999887653

>KOG0630 consensus Predicted pyridoxal-dependent decarboxylase [Amino acid transport and metabolism]

Probab=99.57  E-value=5.8e-14  Score=137.48  Aligned_cols=265  Identities=18%  Similarity=0.253  Sum_probs=183.5

Q ss_pred             hHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHH----hCcc---CCCCeEEEeCCCCch
Q 037144          114 AVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKK----IGRE---NISKLVVYSSDQTHC  186 (502)
Q Consensus       114 ~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~----~~~~---~~~~~~v~~s~~~H~  186 (502)
                      +.-+.-.+..|+..+|.+.++..|.......|...-..++..++..|....+..    .|+.   ....+++|+|+..|.
T Consensus       163 an~i~Gdanh~fgnLF~FAdsqiycsdPaasfhadiadai~haVkLAikar~~~dhs~eG~~afaa~aaPt~YiS~alh~  242 (838)
T KOG0630|consen  163 ANSISGDANHVFGNLFHFADSQIYCSDPAASFHADIADAIGHAVKLAIKARCGGDHSLEGGIAFAALAAPTFYISEALHM  242 (838)
T ss_pred             HHhhccchHHHHHHHHhhcccccccCCchhhhhhhhhhHHHHHHHhhhhhccCCccccccccchHhhcCceEEEcccccH
Confidence            334455677889999998765444333333444333344445554443322211    0100   125689999999998


Q ss_pred             hH-HHHHHHcCCCCCCEEEEecCCCC--CcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhC
Q 037144          187 AF-QKAAQIVGIDRKNIRAIKTTKSS--SYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFG  263 (502)
Q Consensus       187 s~-~~aa~~~Glg~~~v~~v~~~~~~--~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g  263 (502)
                      -. ..+|+.+|+.-..+..++-...+  .|+||.-.+++.|+++..+|++|+++++..|++..|..|-|-.|.++|++++
T Consensus       243 ~l~hYaarefGIa~~aI~~~~dhdqgeiegriDhh~feKiideDlaagkkPLilia~iGasi~GqnDmi~kildi~eaha  322 (838)
T KOG0630|consen  243 DLLHYAAREFGIADEAIKPILDHDQGEIEGRIDHHLFEKIIDEDLAAGKKPLILIADIGASICGQNDMILKILDICEAHA  322 (838)
T ss_pred             HHHHHHHHHhCCchhheecccccccccccccccHHHHHHHHHHHHhCCCCCeEEEEeccchhhcchHHHHHHHHHHHHhh
Confidence            54 55889999944333333321111  3699999999999999999999999999999999999999999999999997


Q ss_pred             -CEEEeecccccccccCccchhhhc-CCCCCCeeEEccCCcCCCCCcceEEEeeCchhh-hhhhcCCcccccCccCCCCC
Q 037144          264 -IWVHVDAAYAGSACICPEFRHFID-GVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCL-LSTLSTNPQYLKNEATDQEP  340 (502)
Q Consensus       264 -~~lhVDaA~g~~~~~~~~~~~~~~-~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l-~~~~~~~~~yl~~~~~~~~~  340 (502)
                       +|+|.-| ++..++.|.+....+- -.+..||++++.--|++.|..--+++-|.-+-. ..+|..              
T Consensus       323 kfWLHasG-haiAALt~aepnnil~HV~eqldSMal~ialWLGiPSaPiV~LHRPleg~aaSafes--------------  387 (838)
T KOG0630|consen  323 KFWLHASG-HAIAALTCAEPNNILGHVEEQLDSMALNIALWLGIPSAPIVLLHRPLEGSAASAFES--------------  387 (838)
T ss_pred             heeEeecc-chhhheeecCcccchhHHHHHHhhccchhHHHhCCCCCceEEeecccccccchhccc--------------
Confidence             9999986 4444454543222211 134789999999999999965444443322110 001111              


Q ss_pred             cccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q 037144          341 KEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAF  403 (502)
Q Consensus       341 ~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~  403 (502)
                                -.-.+++..++.+|.+++++|...+.++++....+.+.+.+.+.+.+++++++
T Consensus       388 ----------dpi~rekLdaLp~Wta~q~LggKaIadmienAFll~kilfe~aSa~~eiemig  440 (838)
T KOG0630|consen  388 ----------DPILREKLDALPLWTALQALGGKAIADMIENAFLLCKILFEGASACEEIEMIG  440 (838)
T ss_pred             ----------ChHHHHhhccchHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhcCCceeEec
Confidence                      11145667999999999999999999999999999999999999999999975

>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.57  E-value=6.9e-12  Score=129.67  Aligned_cols=319  Identities=8%  Similarity=-0.022  Sum_probs=174.5

Q ss_pred             HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144          116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV  195 (502)
Q Consensus       116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~  195 (502)
                      +.+.++.+.|.+++.-..       ...+|+++||+|+..|++.||.....+ +..+ +.-+|......|-...-+....
T Consensus        85 ~~~~~la~~l~~~~p~~~-------~~v~f~~sGseA~e~A~klar~~~~~~-~~~~-r~~ii~~~~~yHG~t~~~ls~~  155 (423)
T PRK05964         85 EPAERLAQRLVALTPGGL-------DHVFFSDSGSVAVEVALKMALQYWRNR-GEPG-RSRFLSLRGGYHGDTIGTMSVG  155 (423)
T ss_pred             HHHHHHHHHHHHhCCCCC-------CEEEEeCCcHHHHHHHHHHHHHHHHhc-CCCC-CcEEEEEcCCcCCccHHHHhcC
Confidence            445567777888763111       157999999999999999999753222 1111 2234444444554332222222


Q ss_pred             CCC---------CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEec-CCccccccC----ChhHHHHHHHH
Q 037144          196 GID---------RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATV-GTTAITAVD----PLKPLCDVAKQ  261 (502)
Q Consensus       196 Glg---------~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~-gtt~~G~id----pl~eI~~i~~~  261 (502)
                      +-+         ...+..+|....+....++++|++.+.+.   +..+.+|++.. .....|.+-    .+++|.++|++
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~---~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~  232 (423)
T PRK05964        156 DRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEALLEKH---AGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDR  232 (423)
T ss_pred             CCccccccccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhC---CCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHH
Confidence            210         01234444432111122378888888642   22344555544 244456553    49999999999


Q ss_pred             hCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCC---cccccCccCC
Q 037144          262 FGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTN---PQYLKNEATD  337 (502)
Q Consensus       262 ~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~---~~yl~~~~~~  337 (502)
                      ||+++++|.++.|+.....-+.....++ ..|.++++  |+++.+ .+.|.++.++ +. .+.+...   ..++...   
T Consensus       233 ~g~llI~DEv~tg~gr~G~~~a~~~~~v-~pDi~~~~--K~l~gG~~p~~av~~~~-~i-~~~~~~~~~~~~~~~~~---  304 (423)
T PRK05964        233 HGVLLIFDEIATGFGRTGTLFACEQAGV-SPDIMCLS--KGLTGGYLPLAATLCTA-EI-FEAFYSDDRAKAFMHSP---  304 (423)
T ss_pred             cCCEEEEechhhCCCcCcchhHHHhcCC-CCCeeeee--hhhhcCcccceEEEEcH-HH-HHhhhcCCcccccccCC---
Confidence            9999999999966532211111111233 57877765  999776 5678876643 32 2233211   0111100   


Q ss_pred             CCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC--CCeeEEEEEee
Q 037144          338 QEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP--RNFSLVCFRVT  415 (502)
Q Consensus       338 ~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~--~~~~~v~f~~~  415 (502)
                                   |+ .+.+....+..++++.+..   ....++..++.+++++.|+++.++..+..  ....++.+.+.
T Consensus       305 -------------T~-~~np~~~aaa~a~l~~l~~---~~~~~~~~~~g~~l~~~l~~l~~~~~i~~vrg~Gl~~~i~l~  367 (423)
T PRK05964        305 -------------SY-TANPLACAAANASLDLFED---EPVLERVAALSAGLAEGLEPFRDLPGVADVRVLGAIGAVELD  367 (423)
T ss_pred             -------------CC-CcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHhhccCCCeEEeecccEEEEEEec
Confidence                         00 1111122233344444322   23567777888888888876533322211  22344555553


Q ss_pred             cCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHH
Q 037144          416 PSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVV  495 (502)
Q Consensus       416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l  495 (502)
                      ...                      .   .+....+.+.+.++|.++ .+.   + ..+|++.. ...+++|||++++++
T Consensus       368 ~~~----------------------~---~~~~~~l~~~l~~~Gv~v-~~~---~-~~lR~~p~-l~~t~edId~~v~~l  416 (423)
T PRK05964        368 RPV----------------------L---ERDGPALRAFALERGVLL-RPL---G-NTIYLMPP-YIITAEELDRITDAI  416 (423)
T ss_pred             cCc----------------------c---hhHHHHHHHHHHHCCeEE-Eec---C-CEEEEeCC-cccCHHHHHHHHHHH
Confidence            321                      0   123456778888889654 331   1 47999864 456777999999999


Q ss_pred             HHHHHhC
Q 037144          496 QEHLEAF  502 (502)
Q Consensus       496 ~~~~~~~  502 (502)
                      +++.+++
T Consensus       417 ~~al~~~  423 (423)
T PRK05964        417 VEVADEL  423 (423)
T ss_pred             HHHHhhC
Confidence            9988764

>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional

Probab=99.56  E-value=5.8e-12  Score=130.61  Aligned_cols=310  Identities=10%  Similarity=0.030  Sum_probs=179.1

Q ss_pred             HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144          116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV  195 (502)
Q Consensus       116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~  195 (502)
                      +...++.+.|++++.-+..       ..+|++|||+||-.|+..||...-++    + +..+|......|-...-+....
T Consensus       124 ~~~~~lae~L~~~~p~~~~-------~v~f~~SGsEAve~AlklAr~~t~~~----g-r~~ii~~~~~yHG~t~~~ls~~  191 (459)
T PRK11522        124 PLRAMLAKTLAALTPGKLK-------YSFFCNSGTESVEAALKLAKAYQSPR----G-KFTFIATSGAFHGKSLGALSAT  191 (459)
T ss_pred             HHHHHHHHHHHHhCCCCCC-------EEEEeCCchHHHHHHHHHHHHHhccC----C-CcEEEEecCCCCCCcHHHhhhc
Confidence            3445566777777532211       47999999999999999998753110    1 1223333334454333333333


Q ss_pred             CCC---------CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHHHHHh
Q 037144          196 GID---------RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDVAKQF  262 (502)
Q Consensus       196 Glg---------~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~~~~  262 (502)
                      |-.         ...+..+|.       -|.+++++++++..+.+..+.+|++.......|.+-|    ++++.++|++|
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~  264 (459)
T PRK11522        192 AKSTFRKPFMPLLPGFRHVPF-------GNIEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEF  264 (459)
T ss_pred             CCcccccCCCCCCCCCcccCC-------CCHHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHc
Confidence            321         001222222       1788999988754333445667777777777788877    99999999999


Q ss_pred             CCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCcccccCccCCCCCc
Q 037144          263 GIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPK  341 (502)
Q Consensus       263 g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~  341 (502)
                      |+.+++|.++.|+.....-+..-..++ ..|.+++  .|.++.. ++.|.++.++. .. +.+... ++....       
T Consensus       265 g~llI~DEV~tG~GRtG~~~a~e~~gv-~PDivt~--gK~lggG~~Pigav~~~~~-i~-~~~~~~-~~~~~~-------  331 (459)
T PRK11522        265 GALLILDEVQTGMGRTGKMFACEHENV-QPDILCL--AKALGGGVMPIGATIATEE-VF-SVLFDN-PFLHTT-------  331 (459)
T ss_pred             CCEEEeccceecCCccchhhhhhccCC-CCCEEEe--chhhhCCCccceeEEEcHH-HH-HHhccC-CcccCC-------
Confidence            999999999976422211111111234 4788766  5998765 35788887643 22 222211 121110       


Q ss_pred             ccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeE-EecC--CCeeEEEEEeecC
Q 037144          342 EQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK-RFE-VAFP--RNFSLVCFRVTPS  417 (502)
Q Consensus       342 ~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~-~~~-l~~~--~~~~~v~f~~~~~  417 (502)
                               |+ .+.+..+.+..++++.+-.+   .+.++..++.++|++.|+++. .+. ++..  -...++.+.+...
T Consensus       332 ---------T~-~gnp~~~Aaala~L~~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~VrG~Gl~~giel~~~  398 (459)
T PRK11522        332 ---------TF-GGNPLACAAALATINVLLEQ---NLPAQAEQKGDYLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDN  398 (459)
T ss_pred             ---------CC-CCCHHHHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEeceeEEEEEecCc
Confidence                     00 11122233444556555433   456778888888888887641 121 1111  1233445544321


Q ss_pred             cchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHH
Q 037144          418 AVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQE  497 (502)
Q Consensus       418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~  497 (502)
                                                  +....+.+.+.++|.+ +.+. ..+..++|++.. ...+++|||++++++.+
T Consensus       399 ----------------------------~~~~~i~~~l~~~Gvl-~~~~-~~~~~~lr~~Pp-l~~t~~~id~~l~~l~~  447 (459)
T PRK11522        399 ----------------------------EIGYNFASEMFRQRVL-VAGT-LNNAKTIRIEPP-LTLTIEQCEQVLKAARK  447 (459)
T ss_pred             ----------------------------hHHHHHHHHHHHCCeE-EEec-CCCCCEEEEECC-ccCCHHHHHHHHHHHHH
Confidence                                        2245677788888864 3332 223468999875 44677799999999988


Q ss_pred             HHHh
Q 037144          498 HLEA  501 (502)
Q Consensus       498 ~~~~  501 (502)
                      ++++
T Consensus       448 ~l~~  451 (459)
T PRK11522        448 ALAA  451 (459)
T ss_pred             HHHH
Confidence            7653

>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen)

Probab=99.54  E-value=3.6e-13  Score=131.84  Aligned_cols=319  Identities=14%  Similarity=0.082  Sum_probs=196.8

Q ss_pred             hhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCch-HHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHH
Q 037144          113 AAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTC-EALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKA  191 (502)
Q Consensus       113 ~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt-~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a  191 (502)
                      ....+-..+...+-+..|++...      ..++++.+| +++.+.+.+.|.+  +       ....|+.+...|+|-.++
T Consensus        53 ~~~~ltn~l~~d~~~~~G~~~~~------~~~~vP~atgm~l~l~l~~l~~r--~-------~a~~Viw~ridqkSc~ka  117 (389)
T PF05889_consen   53 LLAKLTNSLVLDALRLAGLRSVK------SCFVVPMATGMSLTLCLLALRMR--P-------KAKYVIWPRIDQKSCFKA  117 (389)
T ss_dssp             HHHHHHHHHHHHHHHHTTHTTHC------EEEEESS-HHHHHHHHHHHHHHH--C-------T--EEEEEEEETHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCcccc------ceEEEecccccHHHHHHHHHhcc--c-------CCceEEEeeccccchHHH
Confidence            34556666777777888987542      467777776 5666666666522  1       345667788999999999


Q ss_pred             HHHcCCCCCCEEEEecCC-CCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc-CChhHHHHHHHHhCCEEEee
Q 037144          192 AQIVGIDRKNIRAIKTTK-SSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV-DPLKPLCDVAKQFGIWVHVD  269 (502)
Q Consensus       192 a~~~Glg~~~v~~v~~~~-~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i-dpl~eI~~i~~~~g~~lhVD  269 (502)
                      +...|+   +++.||... ++....|.+.+|+++++.   |..+.+.+.|..+-..|.. |++++|+++|++||+.++|.
T Consensus       118 i~~AGl---~~~vV~~~~~~d~l~td~~~ie~~i~~~---G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvN  191 (389)
T PF05889_consen  118 IERAGL---EPVVVENVLEGDELITDLEAIEAKIEEL---GADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVN  191 (389)
T ss_dssp             HHHTT----EEEEE-EEEETTEEEEHHHHHHHHHHHH---CGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEE
T ss_pred             HHhcCC---eEEEeeccCCCCeeeccHHHHHHHHHHh---CCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEc
Confidence            999999   999999632 234677899999999553   4446788888877777777 55999999999999999999


Q ss_pred             cccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCc
Q 037144          270 AAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKD  349 (502)
Q Consensus       270 aA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~  349 (502)
                      +|||...-.+-..-.......+.|.++-+.-|.|.+|-|.+.+...++..+... +  ..|-....              
T Consensus       192 nAYgvQ~~~~~~~i~~a~~~GRvda~vqS~dkNF~VPvGgai~As~~~~~i~~v-s--~~YpGRas--------------  254 (389)
T PF05889_consen  192 NAYGVQSSKCMHLIQQAWRVGRVDAFVQSTDKNFMVPVGGAIMASFDPSGILAV-S--KEYPGRAS--------------  254 (389)
T ss_dssp             GTTTTT-HHHHHHHHHHHHHSTCSEEEEEHHHHHCEESSHEEEEESSHHHHHHH-H--HTSHSHBT--------------
T ss_pred             cchhhhHHHHHHHHHHHHhcCCcceeeeecCCCEEecCCCcEEEecCHHHHHHH-H--HHhhhhhh--------------
Confidence            999774321100000000123789999999999999999999888776544321 1  12221100              


Q ss_pred             ccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCeEEecCCCee-EEEEEeecCcchhhhhh
Q 037144          350 WQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD---KRFEVAFPRNFS-LVCFRVTPSAVMDKLRT  425 (502)
Q Consensus       350 ~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~---~~~~l~~~~~~~-~v~f~~~~~~~~~~~~~  425 (502)
                             +...+-+...+..+|..|+...+....++-.++.++|++.   -+-.+...|.-. .+.|......  .    
T Consensus       255 -------~sp~ld~~itLl~LG~~g~~~ll~~r~~~f~~l~erl~~~aee~~e~ll~~p~N~is~a~tl~~l~--~----  321 (389)
T PF05889_consen  255 -------ASPSLDLFITLLSLGCTGYGALLKERKASFPYLKERLKKWAEEVGERLLETPRNHISMAFTLDTLY--E----  321 (389)
T ss_dssp             -------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEBSSSTT-SSEEEEE-TTCC--T----
T ss_pred             -------cccchHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCeeEEEECccch--h----
Confidence                   0123556778888999999999999999999998888542   143444333322 2334332210  0    


Q ss_pred             cccCCCcccccccchhHhhHHHHHHHHHHHHhcCcE---EEEeeeECC--------EEEEEEEecCCCCcHHHHHHHHHH
Q 037144          426 KYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKV---FMTHAIVGG--------IYVLRFAAGNSMTMESHVRAAWTV  494 (502)
Q Consensus       426 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~---~~~~~~~~g--------~~~lR~~~~~~~t~~~di~~~~~~  494 (502)
                                   ...    .....|...|..+|..   .+.+..-..        ..+|-++- ....++||||.+++.
T Consensus       322 -------------~~~----k~~~~lgs~Lf~R~VsG~RvV~~~~~~~tsh~~~yp~~Ylt~As-aiG~~~eevd~~v~r  383 (389)
T PF05889_consen  322 -------------ISQ----KDGTFLGSMLFKRGVSGIRVVTPGGKKQTSHSSNYPCPYLTAAS-AIGMTREEVDYFVKR  383 (389)
T ss_dssp             -------------CCS----SHHHHHHHHHHHTTEESSEEEETSSCEEETTSS--SSSEEEEEE--TT--HHHHHHHHHH
T ss_pred             -------------hcc----chhhhHHHHHHhCCcccceeeccCCCcccccCCCCchHHHHHHH-HhCCCHHHHHHHHHH
Confidence                         000    1123555666666642   222111111        25777743 466788899999999


Q ss_pred             HHHHHH
Q 037144          495 VQEHLE  500 (502)
Q Consensus       495 l~~~~~  500 (502)
                      |+++.+
T Consensus       384 L~k~i~  389 (389)
T PF05889_consen  384 LDKIIK  389 (389)
T ss_dssp             HHHHHH
T ss_pred             HHHHhC
Confidence            999864

Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.

>PRK04260 acetylornithine aminotransferase; Provisional

Probab=99.54  E-value=7.2e-12  Score=127.65  Aligned_cols=278  Identities=13%  Similarity=0.107  Sum_probs=155.6

Q ss_pred             cEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCC------CEEEEecCCCCCccc
Q 037144          142 GGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRK------NIRAIKTTKSSSYGL  215 (502)
Q Consensus       142 ~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~------~v~~v~~~~~~~~~~  215 (502)
                      -.+|++|||+||..|+..+|...    +    ++.+|......|-+...++...|....      .+..++..   . ..
T Consensus        86 ~~~~~~SGseA~~~Al~~ar~~~----~----~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~  153 (375)
T PRK04260         86 LAFFCNSGAEANEAAIKIARKAT----G----KQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYA---I-FN  153 (375)
T ss_pred             EEEEcCccHHHHHHHHHHHHHhc----C----CCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEe---C-CC
Confidence            36899999999999999997641    0    234555566678777666655443100      01111110   0 24


Q ss_pred             CHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCC
Q 037144          216 SAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEC  291 (502)
Q Consensus       216 d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~  291 (502)
                      |+++|++.+.++      ..+|++....+.+|.+-|    +++|.++|+++|+++++|++|.+.......+.....++ .
T Consensus       154 dl~~l~~~l~~~------~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~~-~  226 (375)
T PRK04260        154 DLNSVKALVNKN------TAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGI-E  226 (375)
T ss_pred             CHHHHHHhcCCC------eEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhCC-C
Confidence            889999887532      346777777778888754    89999999999999999999976422111111111233 3


Q ss_pred             CCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc
Q 037144          292 VDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG  371 (502)
Q Consensus       292 aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g  371 (502)
                      .|.+  ++.|.++.....|.++.++. . .+.+... .+..                  ++ .+.+..+..+..+++.+.
T Consensus       227 pdi~--t~sK~l~~G~~ig~~~~~~~-~-~~~~~~~-~~~~------------------t~-~~~~~~~~aa~a~l~~~~  282 (375)
T PRK04260        227 PDIF--TLAKGLANGVPVGAMLAKSS-L-GGAFGYG-SHGS------------------TF-GGNKLSMAAASATLDIML  282 (375)
T ss_pred             CCEE--EecccccCCcceEEEEEcHH-H-HhhcCCC-CCCC------------------CC-CcCHHHHHHHHHHHHHHH
Confidence            5655  46799875566888888643 2 2222110 0000                  00 011112233344444433


Q ss_pred             HHH-HHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHH
Q 037144          372 VAN-LRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRE  450 (502)
Q Consensus       372 ~~g-~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  450 (502)
                      .+. .++..+....+.+.+.+.+.+.+.+.-+ +....++.+.+...                              ..+
T Consensus       283 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~~~------------------------------~~~  331 (375)
T PRK04260        283 TAGFLEQALENGNYLQEQLQKALQDKETVTTV-RGLGYMIGIETTAD------------------------------LSQ  331 (375)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhCCCeeEE-eccceEEEEEecCc------------------------------HHH
Confidence            322 2233333334444444444444322222 11233444444211                              246


Q ss_pred             HHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144          451 LLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEH  498 (502)
Q Consensus       451 l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~  498 (502)
                      +.+++.++|..+.+.    +...+|++.... .+++||+++++.|+++
T Consensus       332 ~~~~l~~~Gi~v~~~----~~~~lR~~~~~~-~t~~~i~~~l~~l~~~  374 (375)
T PRK04260        332 LVEAARDKGLIVLTA----GTNVIRLLPPLT-LTKEEIEQGIAILSEV  374 (375)
T ss_pred             HHHHHHhCCCEEecC----CCCEEEEcCCCc-cCHHHHHHHHHHHHHh
Confidence            777787889754322    346799998544 4577999999999775

>PRK12566 glycine dehydrogenase; Provisional

Probab=99.53  E-value=5.6e-12  Score=136.71  Aligned_cols=362  Identities=10%  Similarity=0.047  Sum_probs=213.9

Q ss_pred             chhHhhcCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCcccccCCCCCCHHHHHHHH-------HHhhcCCCCccccc
Q 037144           38 PGYLKKRLPESAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEM-------LSSGFNVVGLDWIS  110 (502)
Q Consensus        38 ~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-------l~~~~n~~~~~~~~  110 (502)
                      |..++..-+..+|+ +.+..++++++++....|..   ...|.|--.-+...|+++.+-       ++++ -+++..-++
T Consensus        46 P~~ir~~~~l~lp~-~~sE~e~~~~~~~~a~kN~~---~~~fiG~G~y~~~~P~vi~~~i~~~~~~yTaY-TPYQpEisQ  120 (954)
T PRK12566         46 PPAIRLNRPLDLPA-ALDEQAALARLRGYAEQNQV---WTSLIGMGYHGTVTPTVILRNVLENPGWYTAY-TPYQPEIAQ  120 (954)
T ss_pred             CHHHhcCCCCCCCC-CCCHHHHHHHHHHHHhcCCC---ccccccccccCCcCcHHHHHHHHhCchhhhcC-CCCCchhhh
Confidence            55665433456666 68999999999988666644   345666443344556666332       3332 344433345


Q ss_pred             ChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHH
Q 037144          111 SPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQK  190 (502)
Q Consensus       111 ~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~  190 (502)
                      +....-+|.+  .++++|.|++-.       +..+.-++|.+- .|+..++... +.      ++.++++++..|+....
T Consensus       121 G~Lqal~e~Q--tmi~~LtGm~va-------NASl~D~atA~a-EA~~ma~~~~-~~------k~~~~~v~~~~hP~~~~  183 (954)
T PRK12566        121 GRLEALLNFQ--QMTIDLTGLDLA-------NASLLDEATAAA-EAMALAKRVA-KS------KSNRFFVDEHCHPQTLS  183 (954)
T ss_pred             HHHHHHHHHH--HHHHHHhCchhh-------hhhhccchhHHH-HHHHHHHHHh-hc------CCCEEEECCCCCHHHHH
Confidence            5555556655  789999999853       223334444222 2333333211 10      24568899999986554


Q ss_pred             H----HHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEE
Q 037144          191 A----AQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWV  266 (502)
Q Consensus       191 a----a~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~l  266 (502)
                      .    ++.+|+   +++.             ++|++.+.++      .+.|++..++ ..|.+.++++|++++|+.|..+
T Consensus       184 v~~t~~~~~g~---~i~~-------------~~~~~~~~~~------~~~v~vq~P~-~~G~i~d~~~i~~~~h~~gal~  240 (954)
T PRK12566        184 VLRTRAEGFGF---ELVV-------------DAVDNLAAHA------VFGALLQYPD-THGEIRDLRPLIDQLHGQQALA  240 (954)
T ss_pred             HHHHhhhcCCc---EEEE-------------cchhhcCCCC------EEEEEEECCC-CceEEccHHHHHHHHHHcCCEE
Confidence            3    344565   5553             2233333222      3467676665 7899999999999999999875


Q ss_pred             EeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-----cceEEEeeCchhhhhhhcCCcccccCccCCCCCc
Q 037144          267 HVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-----DCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPK  341 (502)
Q Consensus       267 hVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-----~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~  341 (502)
                      + +++--...........+     +||.++.+ ++-|++|.     ..|++.+|++  +   ....|..+.+...+   .
T Consensus       241 ~-~~~d~laL~ll~~Pge~-----GADI~vG~-~Q~fGvp~~~GGP~ag~~a~~~~--~---~R~~PGRivG~s~D---~  305 (954)
T PRK12566        241 C-VAADLLSLLVLTPPGEL-----GADVVLGS-TQRFGVPMGYGGPHAAYFACRDD--Y---KRAMPGRIIGVSRD---A  305 (954)
T ss_pred             E-EEeCHHHHhCCCChhhc-----CCcEEeeC-CCcCCCCCCCCCCCeeeeeehHH--H---HhhCCCCccceeec---C
Confidence            5 44432222222222222     89998554 44444443     3677877754  2   23345555443333   1


Q ss_pred             ccccCCCcccccC----CCCCCc----------hHHHHHHH--HhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC
Q 037144          342 EQEVGYKDWQITL----CRRFRS----------LKLWVVIR--NFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR  405 (502)
Q Consensus       342 ~~~~~~~~~~~~~----sr~~~a----------l~~~~~l~--~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~  405 (502)
                      .+...+. .++|.    -||..|          +++.+++.  ++|.+|++++.++...++.+|.+.|.+ .|+++...+
T Consensus       306 ~G~~a~~-l~LqtREQHIRReKAtSNICT~qaL~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~-~g~~~~~~~  383 (954)
T PRK12566        306 RGNTALR-MALQTREQHIRREKANSNICTAQVLLANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEA-KGIKRLNRH  383 (954)
T ss_pred             CCCeeee-hhhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHh-cCCccccCC
Confidence            2222221 22222    355333          23333333  469999999999999999999999999 599998776


Q ss_pred             CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcH
Q 037144          406 NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTME  485 (502)
Q Consensus       406 ~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~  485 (502)
                      -+..++++....                              ..++.++..+.|.-+..   ++ ...+.+|+- -.+++
T Consensus       384 fF~~~~v~~~~~------------------------------~~~~~~~a~~~~~n~r~---~~-~~~~~~s~d-e~~~~  428 (954)
T PRK12566        384 FFDTLTLEVGGA------------------------------QAAIIESAEAARINLRI---LG-RGRLGVSLD-ETCDE  428 (954)
T ss_pred             ccceEEEEccCC------------------------------HHHHHHHHHHCCCeeEE---eC-CCeEEEEeC-CCCCH
Confidence            677777766211                              23455555556653221   22 235888875 56788


Q ss_pred             HHHHHHHHHHH
Q 037144          486 SHVRAAWTVVQ  496 (502)
Q Consensus       486 ~di~~~~~~l~  496 (502)
                      +|++.+++.+.
T Consensus       429 ~~~~~~~~~f~  439 (954)
T PRK12566        429 ATVARLFDIFL  439 (954)
T ss_pred             HHHHHHHHHhc
Confidence            89999999884

>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]

Probab=99.53  E-value=1.5e-11  Score=119.79  Aligned_cols=332  Identities=12%  Similarity=0.108  Sum_probs=206.3

Q ss_pred             cccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCc
Q 037144          106 LDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTH  185 (502)
Q Consensus       106 ~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H  185 (502)
                      ..|..+.+..++-..+.+.....+..|...    ..+.++|+|.|.+...++.++.+           .++.|++...++
T Consensus        94 lQYg~s~G~peLl~fik~h~~~~ih~p~~~----~wdiiit~G~t~~l~~~l~~~~N-----------~gd~vlie~~ty  158 (472)
T KOG0634|consen   94 LQYGQSSGIPELLLFIKDHNRPTIHAPPYK----NWDIIITNGNTDGLFKVLRTLIN-----------RGDHVLIEEYTY  158 (472)
T ss_pred             hccccccCcHHHHHHHHHhccccccCCCCC----CceEEEecCCchHHHHHHHHhhc-----------CCCceEEecccc
Confidence            356666677766655555444344444321    12789999999999999988887           578899999999


Q ss_pred             hhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhc---CCccEEEEEe--cCCccccccCCh---hHHHH
Q 037144          186 CAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEA---ELIPLFLCAT--VGTTAITAVDPL---KPLCD  257 (502)
Q Consensus       186 ~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~---g~~p~~Vv~t--~gtt~~G~idpl---~eI~~  257 (502)
                      .+-..+.+.+|+   +++.|+.|.+   .|++|.|++.+......   ..+|- |.-|  .|.|+||..-.+   ++|.+
T Consensus       159 ~~AL~s~~a~gv---~~ipv~md~~---Gi~pE~l~~il~~w~~~~~k~~~p~-vlYTIPTgqNPTG~tls~errk~iy~  231 (472)
T KOG0634|consen  159 PSALQSMEALGV---KIIPVKMDQD---GIDPESLEEILSNWKPGSYKKPKPH-VLYTIPTGQNPTGNTLSLERRKKIYQ  231 (472)
T ss_pred             hHHHHhccccCc---eEEeccccCC---CCCHHHHHHHHhcCCcccccCCCCe-EEEeCcCCCCCCCCccCHHHHHHHHH
Confidence            999999999999   9999988753   69999999999865432   12343 3333  488999998655   58999


Q ss_pred             HHHHhCCEEEeecccccccccC---------ccch------hhhcCCCCCC----eeEEc-cCCcCCCCCcceEEEeeCc
Q 037144          258 VAKQFGIWVHVDAAYAGSACIC---------PEFR------HFIDGVECVD----SFSFN-PHKWLFTTLDCCCLWVKDP  317 (502)
Q Consensus       258 i~~~~g~~lhVDaA~g~~~~~~---------~~~~------~~~~~~~~aD----si~~~-~hK~l~~p~~~g~~~~r~~  317 (502)
                      +|+||++.++.|..|.-..+..         |.+.      .+....-..|    +|..+ ++|-+......|++...+ 
T Consensus       232 LArKyDfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPGlRlG~it~~~-  310 (472)
T KOG0634|consen  232 LARKYDFLIVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPGLRLGWITGNS-  310 (472)
T ss_pred             HHHHcCEEEEecCccceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhcCcceeEEeecCH-
Confidence            9999999999999885544321         1111      1111111111    33333 678887666677765433 


Q ss_pred             hhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHH----HHHHHHHHHHHHH
Q 037144          318 SCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIR----SHVGMAKLFERLV  393 (502)
Q Consensus       318 ~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~----~~~~la~~l~~~l  393 (502)
                      ..+...+...                     +.+.+....+...-+++.++.+|++|+.+.+.    .+...+..+...+
T Consensus       311 ~~l~ril~~a---------------------e~~t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al  369 (472)
T KOG0634|consen  311 LFLKRILDLA---------------------EVATSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSAL  369 (472)
T ss_pred             HHHHHHhhhc---------------------ceeecCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            2222221110                     11111112235567788899999977655444    4456667777777


Q ss_pred             hc-CCCe-EEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeE--C
Q 037144          394 TS-DKRF-EVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIV--G  469 (502)
Q Consensus       394 ~~-~~~~-~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~--~  469 (502)
                      .+ +|.- -.+.+|..+++.+.-.+-..          .+        ....+++....+...+.+.|..++.+..+  .
T Consensus       370 ~kylp~~~~~~~~P~aGmFiwv~i~~~~----------~~--------~~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~  431 (472)
T KOG0634|consen  370 DKYLPKSVCEYHPPKAGMFIWVEIPYIN----------FD--------TKKSINQIEEIIFIKAVKNGVKLVCGSWFMVD  431 (472)
T ss_pred             HHhCCCCeeEEecCCcceEEEEEecccc----------cc--------cccchHHHHHHHHHHHHHCCeEEecCceeEEc
Confidence            54 4543 22346766666554433100          00        01223445556677778888866555433  1


Q ss_pred             -----CEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          470 -----GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       470 -----g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                           ++-++|+++..  .+.+++++.++.+..+.++
T Consensus       432 p~~s~~kiffRls~a~--a~~e~l~~g~~rf~~~ike  466 (472)
T KOG0634|consen  432 PESSWSKIFFRLSIAF--AEPEKLDEGIERFGSVIKE  466 (472)
T ss_pred             CccCCCcceEEEEeec--CCHHHHHHHHHHHHHHHHH
Confidence                 33499999864  3556888888888777654

>TIGR03372 putres_am_tran putrescine aminotransferase

Probab=99.51  E-value=6.4e-11  Score=122.06  Aligned_cols=306  Identities=11%  Similarity=0.037  Sum_probs=174.3

Q ss_pred             HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144          116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV  195 (502)
Q Consensus       116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~  195 (502)
                      +...++.+.|++++.-+..       ..+|++||||||-.|+..||....++ |    +..+|......|-...-+....
T Consensus       117 ~~~~~lAe~L~~~~p~~~~-------~v~f~~SGsEA~e~AlklAr~~t~~~-g----r~~ii~~~~~yHG~t~~~ls~t  184 (442)
T TIGR03372       117 PLRALLAKTLAALTPGKLK-------YSFFCNSGTESVEAALKLAKAYQSPR-G----KFTFIAASGAFHGKSLGALSAT  184 (442)
T ss_pred             HHHHHHHHHHHHhCCCCcC-------EEEEeCCchHHHHHHHHHHHHHHhhc-C----CcEEEEECCCccCCCHHHhhcc
Confidence            3445577778887643211       47899999999999999998763211 1    1223444444554433333322


Q ss_pred             CC-------C--CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHHHHHh
Q 037144          196 GI-------D--RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDVAKQF  262 (502)
Q Consensus       196 Gl-------g--~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~~~~  262 (502)
                      |-       +  ...++.+|.+       |.+.+++.+++....+....+|++.......|.+-|    +++|.++|++|
T Consensus       185 ~~~~~~~~~~p~~~~~~~~p~~-------d~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~  257 (442)
T TIGR03372       185 AKPAFRKPFMPLLPGFHHVAFG-------DIEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEF  257 (442)
T ss_pred             CCcccCCCCCCCCCCCEEeCCC-------CHHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHc
Confidence            21       0  0123444432       678888888654334445667777776667788888    99999999999


Q ss_pred             CCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCcccccCccCCCCCc
Q 037144          263 GIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPK  341 (502)
Q Consensus       263 g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~  341 (502)
                      |+.+++|.++.|+-....-+.....++ ..|.+++  .|.++.. ++.|.++.++. . .+.+... ++....       
T Consensus       258 g~llI~DEV~tG~GRtG~~~a~e~~gv-~PDivt~--gK~lg~G~~Pigavv~~~~-i-~~~~~~~-~~~~~~-------  324 (442)
T TIGR03372       258 GALLILDEVQTGMGRTGKMFACEHEGV-QPDILCL--AKALGGGVMPIGATIATEA-V-FSVLFDN-PFLHTT-------  324 (442)
T ss_pred             CCEEEEeecccCCCccccchhhhhcCC-CCCeeee--hhhhcCCcccceEEEecHH-H-HHhhhcc-CccccC-------
Confidence            999999999966432221111111234 5788875  5998765 35788777633 2 2333211 122110       


Q ss_pred             ccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----C-CeEEecCCCeeEEEEEeec
Q 037144          342 EQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD----K-RFEVAFPRNFSLVCFRVTP  416 (502)
Q Consensus       342 ~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~----~-~~~l~~~~~~~~v~f~~~~  416 (502)
                               |+ .+.+..+.+..++++.+-.+   ++.++..++.++|++.|+++    | .+.=+ .-...++.+.+..
T Consensus       325 ---------T~-~gnp~~~Aaa~a~L~~i~~~---~l~~~~~~~G~~l~~~L~~l~~~~~~~i~~v-RG~Gl~~giel~~  390 (442)
T TIGR03372       325 ---------TF-GGNPLACAAALATINELLEK---NLPAQAAIKGDFLLDGFQQLAAEYPDLIIEA-RGKGLLMAIEFRD  390 (442)
T ss_pred             ---------CC-CCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHhCCCceEEE-ecceEEEEEEeCC
Confidence                     00 11122223334445544333   34556667777777777653    2 11111 1123344554432


Q ss_pred             CcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHH
Q 037144          417 SAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQ  496 (502)
Q Consensus       417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~  496 (502)
                                                  ++....+.+.+.++|.+. .... .+...+|++.. ...+++|+|++++++.
T Consensus       391 ----------------------------~~~~~~i~~~l~~~Gvl~-~~~~-~~~~~lr~~Pp-l~~t~~~id~~~~~l~  439 (442)
T TIGR03372       391 ----------------------------NEIGYAFAKELFQQNILV-AGTL-NNAKSIRIEPP-LTITIEQCALVIKAAK  439 (442)
T ss_pred             ----------------------------hHHHHHHHHHHHHCCcEE-eecC-CCCCEEEEECC-cccCHHHHHHHHHHHH
Confidence                                        122356778888888653 3221 12358999875 4456779999999998


Q ss_pred             HH
Q 037144          497 EH  498 (502)
Q Consensus       497 ~~  498 (502)
                      +.
T Consensus       440 ~~  441 (442)
T TIGR03372       440 DA  441 (442)
T ss_pred             Hh
Confidence            75

Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.

>PLN02760 4-aminobutyrate:pyruvate transaminase

Probab=99.50  E-value=4.4e-11  Score=125.32  Aligned_cols=333  Identities=12%  Similarity=0.017  Sum_probs=179.6

Q ss_pred             HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH
Q 037144          115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI  194 (502)
Q Consensus       115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~  194 (502)
                      ++.+.++.+.|.+++.-.. .     ...+|+++|++||..|+..||..... .+..+ +..+|......|-+..-+..+
T Consensus       132 ~~~~~~lae~L~~~~~~~~-~-----~~v~f~~SGsEA~e~AlKlAr~~~~~-~g~~~-r~~iI~~~~~yHG~t~~a~sl  203 (504)
T PLN02760        132 TKPSLDLAKELLEMFTARK-M-----GKVFFTNSGSEANDTQVKLVWYYNNA-LGRPN-KKKFIARSKSYHGSTLISASL  203 (504)
T ss_pred             cHHHHHHHHHHHhhcCCCC-C-----CEEEEeCChHHHHHHHHHHHHHHHHh-cCCCC-CcEEEEECCCccCChHhhhhc
Confidence            3445556666777653211 1     14789999999999999999865311 12111 344566666678776555554


Q ss_pred             cCCC---------CCCEEEEecCCCCC----c-------ccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---
Q 037144          195 VGID---------RKNIRAIKTTKSSS----Y-------GLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---  251 (502)
Q Consensus       195 ~Glg---------~~~v~~v~~~~~~~----~-------~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---  251 (502)
                      .|..         ...+..++.+..-.    +       ....++|++++...  ....+.+|++.......|.+-|   
T Consensus       204 sg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~iAAvI~EPv~g~gG~~~p~~~  281 (504)
T PLN02760        204 SGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLADNLENLILKE--GPETIAAFIAEPVMGAGGVIPPPAT  281 (504)
T ss_pred             cCChhhccCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHHHHHHHHHHHHhc--CCCceEEEEECCccCCCCCcCCCHH
Confidence            4431         01122333211000    0       01124577766431  1234556777666666788888   


Q ss_pred             -hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-cceEEEeeCchhhhhhhcCCcc
Q 037144          252 -LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-DCCCLWVKDPSCLLSTLSTNPQ  329 (502)
Q Consensus       252 -l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~~~  329 (502)
                       +++|.++|++||+++++|.++.|+.....-+..-..++ ..|.++++  |.++..+ +.|.+++++. . .+.+.....
T Consensus       282 yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv-~PDivtlg--K~lggG~~PigAv~~~~~-i-~d~~~~~~~  356 (504)
T PLN02760        282 YFEKIQAVLKKYDILFIADEVICAFGRLGTMFGCDKYNI-KPDLVSLA--KALSSAYMPIGAVLVSPE-I-SDVIHSQSN  356 (504)
T ss_pred             HHHHHHHHHHHcCCEEEecchhhCCcccchhhHHHhcCC-CCcEEEec--ccccCCccccceEeecHH-H-Hhhhhcccc
Confidence             99999999999999999999966543333222222344 48887765  9887543 4677776533 2 233321100


Q ss_pred             cccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC--Ce
Q 037144          330 YLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR--NF  407 (502)
Q Consensus       330 yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~--~~  407 (502)
                      .....            ....|.. +.+..+....++|+.+-.   ++++++..++.++|++.|+++....++...  ..
T Consensus       357 ~~~~~------------~h~~T~~-gnPl~~Aaala~Le~i~~---~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~G  420 (504)
T PLN02760        357 KLGSF------------AHGFTYS-GHPVSCAVALEALKIYKE---RNIPEHVNKIAPRFQDGIKAFSGSPIIGEIRGTG  420 (504)
T ss_pred             cccCc------------ccCCCCC-CCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHhcCCCeeeEEeCc
Confidence            00000            0001111 112222333344444432   256788888889998888765322222111  12


Q ss_pred             eEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHH
Q 037144          408 SLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESH  487 (502)
Q Consensus       408 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~d  487 (502)
                      .++.+.+......           .      ........+...+.+.+.++|.+....    + ..+|++.. ...+++|
T Consensus       421 l~~gie~~~~~~~-----------~------~~~~~~~~~~~~i~~~~~~~Gvl~~~~----g-~~lrl~Pp-l~it~ee  477 (504)
T PLN02760        421 LILGTEFVDNKSP-----------N------DPFPAEWGVGAYFGAECKKRGMLVRVA----G-DNIMMSPP-LIITPEE  477 (504)
T ss_pred             eEEEEEEecCCcc-----------c------ccccchhHHHHHHHHHHHhCCcEEEec----C-CEEEEECC-CCCCHHH
Confidence            3444444321100           0      000001234567788888889754321    2 36888853 3467779


Q ss_pred             HHHHHHHHHHHHHh
Q 037144          488 VRAAWTVVQEHLEA  501 (502)
Q Consensus       488 i~~~~~~l~~~~~~  501 (502)
                      ||++++++.+++++
T Consensus       478 id~~~~~l~~al~~  491 (504)
T PLN02760        478 VDELISIYGKALKA  491 (504)
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999887653

>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated

Probab=99.49  E-value=7.2e-11  Score=121.96  Aligned_cols=313  Identities=12%  Similarity=0.064  Sum_probs=168.7

Q ss_pred             HHHHHHHHHHHHhcCCCCccCcCCCCcEEE-cCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH
Q 037144          116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVI-QGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI  194 (502)
Q Consensus       116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~-t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~  194 (502)
                      ....++.+.|.+++..+...    ....+| ++|||+||..|++.||...    +    +..+|......|-...-+...
T Consensus        82 ~~~~~lae~l~~~~~~~~~~----~~~~~f~~~sGseA~e~AlklAr~~t----g----r~~ii~~~~~yHG~t~~~ls~  149 (425)
T PRK09264         82 TAKREFLETFEETILKPRGL----DYKVQFTGPTGTNAVEAALKLARKVT----G----RTNIVAFTNGFHGMTLGSLAV  149 (425)
T ss_pred             HHHHHHHHHHHHhhcCCcCC----CceEEEeCCCHHHHHHHHHHHHHHhc----C----CCeEEEECCccCCccHHHHHh
Confidence            34455667777765333211    002455 5799999999999998751    1    222344444445433323222


Q ss_pred             cC---------CCCCCEEEEecCCCCCc-ccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc----CChhHHHHHHH
Q 037144          195 VG---------IDRKNIRAIKTTKSSSY-GLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV----DPLKPLCDVAK  260 (502)
Q Consensus       195 ~G---------lg~~~v~~v~~~~~~~~-~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i----dpl~eI~~i~~  260 (502)
                      .|         .....+..+|....... .-|+++|++.|++.......+.+|++.......|.+    +.+++|.++|+
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~  229 (425)
T PRK09264        150 TGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCR  229 (425)
T ss_pred             cCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHH
Confidence            22         11224566665321000 126788888886532111235567766655556654    46999999999


Q ss_pred             HhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCC-CCcceEEEeeCchhhhhhhcCCcccccCccCCCC
Q 037144          261 QFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFT-TLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQE  339 (502)
Q Consensus       261 ~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~-p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~  339 (502)
                      +||+++++|.++.|+......+.....++ ..|.++++  |.++. ...+|++++++.  +. .+.  ......      
T Consensus       230 ~~g~llI~DEV~tG~GrtG~~~~~~~~~v-~PDi~t~~--K~l~~~G~pigav~~~~~--i~-~~~--~~~~~~------  295 (425)
T PRK09264        230 KHDILLIVDDIQAGCGRTGTFFSFERAGI-TPDIVTLS--KSISGYGLPMALVLIKPE--LD-VWK--PGEHNG------  295 (425)
T ss_pred             HcCcEEEEechhhCCccccHHHHHhhcCC-CCCEEEec--cccCCCccceEEEEEchh--hh-ccC--CCccCC------
Confidence            99999999999976432211111111233 56888775  98875 566788888644  11 111  000000      


Q ss_pred             CcccccCCCcccccCCCCCCchHHHHHH-HHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEecCC-CeeEEEEE
Q 037144          340 PKEQEVGYKDWQITLCRRFRSLKLWVVI-RNFGVANLRNFIRSHVGMAKLFERLVTS----DKRFEVAFPR-NFSLVCFR  413 (502)
Q Consensus       340 ~~~~~~~~~~~~~~~sr~~~al~~~~~l-~~~g~~g~~~~~~~~~~la~~l~~~l~~----~~~~~l~~~~-~~~~v~f~  413 (502)
                                 +. .+.+.......+++ ..+..   .++.++..++.++|++.|++    .|.+ +.... ...++.+.
T Consensus       296 -----------T~-~gnp~~~aaa~a~l~~~~~~---~~l~~~~~~~g~~l~~~l~~l~~~~~~~-~~~vrg~Gl~~~i~  359 (425)
T PRK09264        296 -----------TF-RGNNLAFVTATAALEEYWSD---DAFEKEVKAKGELVRERLEEIAAKYPGL-GAEVRGRGMMQGID  359 (425)
T ss_pred             -----------CC-CCCHHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHHHHhCCCc-eecceecccEEEEE
Confidence                       10 01111222233444 22222   24566667777777777654    3322 11111 12333444


Q ss_pred             eecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHH
Q 037144          414 VTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWT  493 (502)
Q Consensus       414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~  493 (502)
                      +.+                            ......+.+.+.++|.++... .. ....||++.. ...++++|+++++
T Consensus       360 l~~----------------------------~~~~~~l~~~~~~~Gv~~~~~-~~-~~~~lr~~p~-l~~t~~ei~~~~~  408 (425)
T PRK09264        360 FGD----------------------------GELAGKIAAEAFENGLIIETS-GP-EDEVVKLLPP-LTIDEEELEEGLD  408 (425)
T ss_pred             ecC----------------------------hHHHHHHHHHHHHCCCEEecc-CC-CCCEEEEeCC-CCCCHHHHHHHHH
Confidence            432                            223456788888889754332 11 1357888854 4456789999999


Q ss_pred             HHHHHHHh
Q 037144          494 VVQEHLEA  501 (502)
Q Consensus       494 ~l~~~~~~  501 (502)
                      .|.++.++
T Consensus       409 ~l~~~l~~  416 (425)
T PRK09264        409 ILEEAVAE  416 (425)
T ss_pred             HHHHHHHH
Confidence            99887653

>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]

Probab=99.48  E-value=4.6e-11  Score=118.54  Aligned_cols=309  Identities=11%  Similarity=0.055  Sum_probs=182.7

Q ss_pred             HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH
Q 037144          115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI  194 (502)
Q Consensus       115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~  194 (502)
                      +++|.++.+.+.++++.-+        ..-|+++||||++.|+..||-.. .       ++.+|-.....|-+.+...--
T Consensus        92 te~Ei~~Aell~~~~p~~e--------~vrfvnSGTEAtmsAiRlARa~T-g-------R~kIikF~G~YHG~~D~~lv~  155 (432)
T COG0001          92 TELEVELAELLIERVPSIE--------KVRFVNSGTEATMSAIRLARAYT-G-------RDKIIKFEGCYHGHSDSLLVK  155 (432)
T ss_pred             CHHHHHHHHHHHHhcCccc--------EEEEecchhHHHHHHHHHHHHhh-C-------CCeEEEEcCCCCCCccHHHhh
Confidence            6788888999999987633        47899999999999999999753 1       233444444555444433222


Q ss_pred             cC-------------CC---CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhH
Q 037144          195 VG-------------ID---RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKP  254 (502)
Q Consensus       195 ~G-------------lg---~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~e  254 (502)
                      .|             +.   .+.++.+|.+       |++.|++++++.   |....+|++.-.-.+.|.+-|    +++
T Consensus       156 agsg~~t~g~p~s~Gvp~~~a~~ti~~~yN-------D~~al~~~~~~~---g~~IAaVIvEPv~gn~g~i~p~~~Fl~~  225 (432)
T COG0001         156 AGSGAATLGSPSSPGVPADVAKHTLVLPYN-------DLEALEEAFEEY---GDDIAAVIVEPVAGNMGVVPPEPGFLEG  225 (432)
T ss_pred             cCcCcccCCCCCCCCCChhhhccEEEecCC-------CHHHHHHHHHHc---CCcEEEEEeccccCCCCCCCCCHHHHHH
Confidence            22             21   1134445543       899999999764   334567888777778888866    789


Q ss_pred             HHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCc
Q 037144          255 LCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNE  334 (502)
Q Consensus       255 I~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~  334 (502)
                      |.++|+++|+.|+.|....|+-+..-. .+..-++ ..|..|++  |.++...++|.+-.|.. .+ +.+... ..+++.
T Consensus       226 Lr~lt~e~G~lLI~DEViTGFR~~~gG-aq~~~gi-~PDlttlG--KiIGGGlP~ga~gGr~e-iM-~~~~p~-g~vyqa  298 (432)
T COG0001         226 LRELTEEHGALLIFDEVITGFRVALGG-AQGYYGV-EPDLTTLG--KIIGGGLPIGAFGGRAE-IM-EQLAPL-GPVYQA  298 (432)
T ss_pred             HHHHHHHcCcEEEEecchhhcccCCcc-cccccCc-Ccchhhhh--hhhcCCcceeeeccHHH-HH-hhhCCC-CCcccc
Confidence            999999999999999998776554211 1112233 57877766  99988888999876533 22 222111 112211


Q ss_pred             cCCCCCcccccCCCcccccCCCCCCchHH---HHHHHHhcH-HHHHHHHHHHHHHHHHHHHHH----hcCCCeEEecCCC
Q 037144          335 ATDQEPKEQEVGYKDWQITLCRRFRSLKL---WVVIRNFGV-ANLRNFIRSHVGMAKLFERLV----TSDKRFEVAFPRN  406 (502)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~~sr~~~al~~---~~~l~~~g~-~g~~~~~~~~~~la~~l~~~l----~~~~~~~l~~~~~  406 (502)
                      .                   +-...++.+   .++++.+-. ++   ..++..+++++|++.|    .+. ++.+.....
T Consensus       299 G-------------------T~sgnplamaAG~atl~~l~~~~~---~y~~l~~~~~~L~~gl~~~~~~~-g~~~~v~~~  355 (432)
T COG0001         299 G-------------------TLSGNPLAMAAGLATLEELMTEEG---VYERLDALGERLAEGLRAAAERH-GIPLTVNRV  355 (432)
T ss_pred             C-------------------CCCCcHHHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHHHh-CCCeEEeee
Confidence            1                   111233333   334444322 22   3444555555555555    444 555543444


Q ss_pred             eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHH
Q 037144          407 FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMES  486 (502)
Q Consensus       407 ~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~  486 (502)
                      .+++++.+.+....              +.......+...+ .++...|.++|. ++++..++      ..+.+...+++
T Consensus       356 gsm~~i~F~~~~~~--------------n~~da~~sd~~~~-~~~~~~~l~~GV-~l~ps~~e------a~flS~ahte~  413 (432)
T COG0001         356 GSMFGIFFTEEGVR--------------NYADAKRSDVERF-AKFFHHLLNRGV-YLAPSQFE------AGFLSTAHTEE  413 (432)
T ss_pred             cceEEEEecCCCCC--------------CHHHHHhhchHHH-HHHHHHHHhCCc-ccCCcccc------ceeeecccCHH
Confidence            56777766553210              1111111222333 344458888886 55554332      23334445777


Q ss_pred             HHHHHHHHHHHHHHh
Q 037144          487 HVRAAWTVVQEHLEA  501 (502)
Q Consensus       487 di~~~~~~l~~~~~~  501 (502)
                      |||+.++++.++.++
T Consensus       414 di~~~~~a~~~~~~~  428 (432)
T COG0001         414 DIDRTLEAADEAFKE  428 (432)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999987764

>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]

Probab=99.48  E-value=2.8e-11  Score=120.80  Aligned_cols=235  Identities=16%  Similarity=0.201  Sum_probs=162.4

Q ss_pred             ccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhH
Q 037144          109 ISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAF  188 (502)
Q Consensus       109 ~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~  188 (502)
                      ...|....+|+.    ++.+=|..         .++.+++|..|+..++.+...           +++.|+++...+...
T Consensus        60 ~~nPT~~~lE~~----~a~LEg~~---------~~~afsSGmaAI~~~~l~ll~-----------~GD~vl~~~~~YG~t  115 (396)
T COG0626          60 TGNPTRDALEEA----LAELEGGE---------DAFAFSSGMAAISTALLALLK-----------AGDHVLLPDDLYGGT  115 (396)
T ss_pred             CCCccHHHHHHH----HHHhhCCC---------cEEEecCcHHHHHHHHHHhcC-----------CCCEEEecCCccchH
Confidence            356767777766    45554443         468888888777666555443           567777777766543


Q ss_pred             H----HHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHH-HHhcCCccEEEEEecCCccccccCChhHHHHHHHHhC
Q 037144          189 Q----KAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINL-DVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFG  263 (502)
Q Consensus       189 ~----~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~-~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g  263 (502)
                      .    +....+|+   ++..++.       .+.+++++++.+ .+      .+|.+-.++|++.-+-||++|+++|+++|
T Consensus       116 ~~~~~~~l~~~gi---~~~~~d~-------~~~~~~~~~~~~~~t------k~v~lEtPsNP~l~v~DI~~i~~~A~~~g  179 (396)
T COG0626         116 YRLFEKILQKFGV---EVTFVDP-------GDDEALEAAIKEPNT------KLVFLETPSNPLLEVPDIPAIARLAKAYG  179 (396)
T ss_pred             HHHHHHHHHhcCe---EEEEECC-------CChHHHHHHhcccCc------eEEEEeCCCCcccccccHHHHHHHHHhcC
Confidence            3    34455677   7777653       255666766664 44      38999999999999999999999999999


Q ss_pred             CEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcc--eEEEeeCchhhhhhh-cCCcccccCccCCCCC
Q 037144          264 IWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDC--CCLWVKDPSCLLSTL-STNPQYLKNEATDQEP  340 (502)
Q Consensus       264 ~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~--g~~~~r~~~~l~~~~-~~~~~yl~~~~~~~~~  340 (502)
                      +.++||.+++.+.+.-| ...      +||.+.-+.-|++++...+  |+++.++... .+.+ .....++.        
T Consensus       180 ~~vvVDNTfatP~~q~P-L~~------GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~-~~~~~~~~~~~~G--------  243 (396)
T COG0626         180 ALVVVDNTFATPVLQRP-LEL------GADIVVHSATKYLGGHSDVLGGVVLTPNEEL-YELLFFAQRANTG--------  243 (396)
T ss_pred             CEEEEECCcccccccCh-hhc------CCCEEEEeccccccCCcceeeeEEecChHHH-HHHHHHHHHhhcC--------
Confidence            99999999988766433 221      7999999999999876443  4344344433 2221 01101111        


Q ss_pred             cccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec-CC--------------
Q 037144          341 KEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAF-PR--------------  405 (502)
Q Consensus       341 ~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~-~~--------------  405 (502)
                                     --..+.-.|..+|  |.+-+.-+++++.++|..+.+.|++.|.++-+. |.              
T Consensus       244 ---------------~~l~p~dA~l~lR--GlkTL~~Rm~~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~  306 (396)
T COG0626         244 ---------------AVLSPFDAWLLLR--GLRTLALRMERHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQM  306 (396)
T ss_pred             ---------------CCCCHHHHHHHHh--ccchHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhc
Confidence                           1124556687777  668888999999999999999999999988543 31              


Q ss_pred             --CeeEEEEEeec
Q 037144          406 --NFSLVCFRVTP  416 (502)
Q Consensus       406 --~~~~v~f~~~~  416 (502)
                        ..++++|.+..
T Consensus       307 ~g~gg~~Sf~l~~  319 (396)
T COG0626         307 TGYGGLFSFELKN  319 (396)
T ss_pred             CCCceEEEEEeCC
Confidence              35688898865

>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]

Probab=99.48  E-value=1.5e-10  Score=117.01  Aligned_cols=319  Identities=11%  Similarity=0.028  Sum_probs=194.7

Q ss_pred             HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcC
Q 037144          117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVG  196 (502)
Q Consensus       117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~G  196 (502)
                      ...++.+.|.+++.-+..      .-.+|+++||+||-.|+..||...-        +..+|-.....|-...-+..+.|
T Consensus       100 ~~v~~ae~L~~~~p~~~~------~~~~f~~sGaeA~E~AiKiAr~~Tg--------r~~viaf~~afHG~T~galslT~  165 (447)
T COG0160         100 PYVELAEKLTALAPGSGL------KKVFFGNSGAEAVEAAIKIARAYTG--------RPGVIAFDGAFHGRTLGALSLTG  165 (447)
T ss_pred             hHHHHHHHHHHhCCcccC------CeEEecCCcHHHHHHHHHHHHHHhC--------CCcEEEECCcccccchhhHHhcc
Confidence            344455666666543211      2579999999999999999998641        23344445556755444444332


Q ss_pred             --------CC--CCCEEEEecCCC--CCc--------ccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----h
Q 037144          197 --------ID--RKNIRAIKTTKS--SSY--------GLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----L  252 (502)
Q Consensus       197 --------lg--~~~v~~v~~~~~--~~~--------~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l  252 (502)
                              .|  ...+..+|....  +.+        .-..+.++..|.+....+..|.++++-......|.+.|    +
T Consensus       166 ~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl  245 (447)
T COG0160         166 SKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFL  245 (447)
T ss_pred             CccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHH
Confidence                    22  124777776421  111        22345566666666556667888888887878888855    8


Q ss_pred             hHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCccccc
Q 037144          253 KPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLK  332 (502)
Q Consensus       253 ~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~  332 (502)
                      +++.++|++||+.+++|.++.|+..-..-+..--.++ ..|.+|++  |.++.....|.++.|..-  .+.......+  
T Consensus       246 ~~l~~~~~~~gillI~DEVQtG~GRTG~~fa~E~~gv-~PDivt~a--K~ig~G~Pl~avv~r~ei--~~~~~g~~~~--  318 (447)
T COG0160         246 KALRKLCREHGILLIADEVQTGFGRTGKMFAFEHFGV-EPDIVTLA--KSLGGGLPLSAVVGRAEI--MDWPPGGHGG--  318 (447)
T ss_pred             HHHHHHHHHcCCEEEEeccccCCCccccchhhhhcCC-CCCEEEec--ccccCCCceeEEeccHHh--cccCCcccCC--
Confidence            8999999999999999999988765442222222344 68999977  988877778888876442  1111111111  


Q ss_pred             CccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEecCCC-e-eE
Q 037144          333 NEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD-KRFEVAFPRN-F-SL  409 (502)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~-~~~~l~~~~~-~-~~  409 (502)
                                        + -.+.+..+.+..++|+.+-.+   .+.++..++.++++++|.++ ..+.+++..+ . -+
T Consensus       319 ------------------T-f~GNpva~Aaa~AvL~vie~e---~L~~~a~~~G~~l~~~L~~l~~~~~~IgdVRG~Glm  376 (447)
T COG0160         319 ------------------T-FGGNPVACAAALAVLDVIEEE---NLLERAAELGEYLRDRLEELQEKHPLIGDVRGLGLM  376 (447)
T ss_pred             ------------------C-CCcCHHHHHHHHHHHHHHHHc---cHHHHHHHHHHHHHHHHHHHHhhcCceecccccceE
Confidence                              1 122222333333444444333   67777888888888888653 2344554433 1 23


Q ss_pred             EEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHH
Q 037144          410 VCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVR  489 (502)
Q Consensus       410 v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~  489 (502)
                      +-+.+..+.-.+                    +-..+...++.+++.++|.++.+.+..  ..+||+..- ...+++++|
T Consensus       377 ~giE~v~d~~t~--------------------~p~~~~~~~i~~~~~~~Glil~~~G~~--~nviRi~PP-L~is~e~~d  433 (447)
T COG0160         377 IGVELVKDRDTK--------------------EPDAELAAKIVARAFERGLLLLTCGPH--GNVLRILPP-LTISDEELD  433 (447)
T ss_pred             EEEEEecCCCCC--------------------CCCHHHHHHHHHHHHHcCCEEeccCCC--CcEEEEeCC-cccCHHHHH
Confidence            334443211000                    001355778899999999876665432  458999853 346677999


Q ss_pred             HHHHHHHHHHHh
Q 037144          490 AAWTVVQEHLEA  501 (502)
Q Consensus       490 ~~~~~l~~~~~~  501 (502)
                      .+++.|.+.+++
T Consensus       434 ~~l~il~~al~~  445 (447)
T COG0160         434 EGLDILEEALKE  445 (447)
T ss_pred             HHHHHHHHHHHh
Confidence            999999988764

>PRK08117 4-aminobutyrate aminotransferase; Provisional

Probab=99.48  E-value=1.1e-10  Score=121.09  Aligned_cols=317  Identities=11%  Similarity=0.027  Sum_probs=174.5

Q ss_pred             HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144          116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV  195 (502)
Q Consensus       116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~  195 (502)
                      +.+.++.+.|++++.-..       ...+|+++|++||..|+..||...    +    ++.+|......|-+..-+..+.
T Consensus        86 ~~~~~la~~L~~~~~~~~-------~~v~f~~SGseA~e~AlklAr~~t----g----r~~ii~~~~~yHG~t~~~~s~~  150 (433)
T PRK08117         86 ESILKLAEELAEITPGGL-------DCFFFSNSGAEAIEGALKLAKHVT----K----RPYIISFTGCFHGRTLGALSVT  150 (433)
T ss_pred             HHHHHHHHHHHHhCCCCC-------CEEEEeCcHHHHHHHHHHHHHHhc----C----CCeEEEECCCcCCcCHHHHhhc
Confidence            344556667777762111       147899999999999999998741    1    2345555555676554443332


Q ss_pred             CC--------C--CCCEEEEecCCCCC--c--------ccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----
Q 037144          196 GI--------D--RKNIRAIKTTKSSS--Y--------GLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----  251 (502)
Q Consensus       196 Gl--------g--~~~v~~v~~~~~~~--~--------~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----  251 (502)
                      +-        +  ...+..+|......  .        .-|+++|++.++.... +..+.+|++.......|.+-|    
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~aavi~Epi~~~~G~~~~~~~~  229 (433)
T PRK08117        151 TSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQVT-PEEVAAVIIEPVLGEGGYIVPPKSF  229 (433)
T ss_pred             CCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHHHHHHHHhccC-CCcEEEEEECCeeCCCCCccCCHHH
Confidence            21        0  11244455431100  0        0156677777754211 223567777766677788888    


Q ss_pred             hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccc
Q 037144          252 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYL  331 (502)
Q Consensus       252 l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl  331 (502)
                      +++|.++|++||+++++|.+|+|+......+.....++ ..|.+  .+.|.++..+..|+++.++. .. +.+... .+ 
T Consensus       230 l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~~~~~gv-~pDi~--t~sK~lg~G~pigav~~~~~-i~-~~~~~~-~~-  302 (433)
T PRK08117        230 LKKLREICDRHGILLIFDEVQTGFGRTGEWFAAQTFGV-VPDIM--TIAKGIASGLPLSAVVASKE-LM-EQWPLG-SH-  302 (433)
T ss_pred             HHHHHHHHHHcCCEEEEecchhccCccccchhHhhcCC-CCCEe--ehhhhccCCCcceeEEEcHH-HH-hhccCC-CC-
Confidence            99999999999999999999987422211111001122 35654  45699986677888777543 22 222110 00 


Q ss_pred             cCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEec-CCCe-e
Q 037144          332 KNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK-RFEVAF-PRNF-S  408 (502)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~-~~~l~~-~~~~-~  408 (502)
                        .               .+. .+.+....+..++++.+..+   .+.++..++.+++++.|+++. .+.++. .+.. .
T Consensus       303 --~---------------~T~-~~np~~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~Gl  361 (433)
T PRK08117        303 --G---------------TTF-GGNPVACAAALATLEVIKEE---KLLDNANEMGAYALERLEVLKEKHPVIGDVRGIGL  361 (433)
T ss_pred             --C---------------CCC-CcCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHhcCCceeeeecCCc
Confidence              0               011 11112223333444443222   456667777888888776541 111111 1111 2


Q ss_pred             EEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHH
Q 037144          409 LVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHV  488 (502)
Q Consensus       409 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di  488 (502)
                      ++.+.+.+...                   ..   .......+.+.+.+.|.++....  ....++|++.. ...++++|
T Consensus       362 ~~gi~~~~~~~-------------------~~---~~~~~~~~~~~l~~~Gv~~~~~g--~~~~~lRl~p~-~~~t~~~i  416 (433)
T PRK08117        362 MIGIEIVDPDG-------------------EP---DGDAVEKILDKCLEKGLLFYLCG--NAGNVLRMIPP-LTVTKEEI  416 (433)
T ss_pred             EEEEEEecCCC-------------------Cc---chHHHHHHHHHHHHCCCEEeecC--CCCCEEEEeCC-ccCCHHHH
Confidence            33344432110                   00   02234567778888897654321  12468999964 34567799


Q ss_pred             HHHHHHHHHHHHh
Q 037144          489 RAAWTVVQEHLEA  501 (502)
Q Consensus       489 ~~~~~~l~~~~~~  501 (502)
                      ++++++|.++.++
T Consensus       417 ~~~~~~l~~~l~~  429 (433)
T PRK08117        417 DEGLDILDEALTE  429 (433)
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999987654

>PRK04612 argD acetylornithine transaminase protein; Provisional

Probab=99.47  E-value=2.9e-10  Score=116.57  Aligned_cols=304  Identities=12%  Similarity=0.053  Sum_probs=168.3

Q ss_pred             HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCe-EEEeCCCCchhHHHHHHHc
Q 037144          117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKL-VVYSSDQTHCAFQKAAQIV  195 (502)
Q Consensus       117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~-~v~~s~~~H~s~~~aa~~~  195 (502)
                      ...++.+.|.++.+..+        ..+|++|||+|+..|+..||.....+ |.. .++. +|......|-...-+....
T Consensus        83 ~~~~la~~L~~~~~~~~--------~v~f~~sGseA~e~AlklAr~~~~~~-g~~-~~r~~ii~~~~~yHG~t~~~~s~~  152 (408)
T PRK04612         83 PPLKLAEELVTASRFAE--------KVFLCNSGTEANEAAIKLVRKWASSQ-GRP-ADKRVIVTFRGSFHGRTLAAVTAT  152 (408)
T ss_pred             HHHHHHHHHHhhCCCCC--------EEEEcCchHHHHHHHHHHHHHHHHhh-CCC-CCCcEEEEECCCcCCccHHHHHhc
Confidence            34456677777754321        58999999999999999999764221 110 0133 4444444564433343333


Q ss_pred             CCCC---------CCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHHHHHh
Q 037144          196 GIDR---------KNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDVAKQF  262 (502)
Q Consensus       196 Glg~---------~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~~~~  262 (502)
                      |-..         ..++.+|.       -|++.|++++..     ..+.+|++.-.....|.+.|    +++|.++|++|
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~~~~-----~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~  220 (408)
T PRK04612        153 AQPKYQEGYEPLPGGFRYVDF-------NDVEALEAAMAG-----GDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQH  220 (408)
T ss_pred             CCcccccCCCCCCCCceEcCC-------CCHHHHHHhhCC-----CCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc
Confidence            3210         01122221       278889888742     22445555443333344432    89999999999


Q ss_pred             CCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcc
Q 037144          263 GIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKE  342 (502)
Q Consensus       263 g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~  342 (502)
                      |+++++|.+|.+......-+.....++ ..|.+++  .|.++..+..|+++.++. . .+.+...   . ..        
T Consensus       221 g~llI~DEv~tg~gr~G~~~a~~~~~~-~pdi~t~--~K~l~~G~piga~~~~~~-~-~~~~~~~---~-~~--------  283 (408)
T PRK04612        221 DALLVLDEIQCGMGRTGTLFAHWQEQV-TPDIVTL--AKALGGGFPIGAMLAGPK-V-AETMQFG---A-HG--------  283 (408)
T ss_pred             CCEEEEeccccCCCcCCchhhhhhcCC-CCCEEEE--cchhcCCCceEEEEECHH-H-HhhhcCC---C-cC--------
Confidence            999999999976433221111111111 3455555  699976677888876543 2 2222211   0 00        


Q ss_pred             cccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEec--CCCeeEEEEEeecCcc
Q 037144          343 QEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK-RFEVAF--PRNFSLVCFRVTPSAV  419 (502)
Q Consensus       343 ~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~-~~~l~~--~~~~~~v~f~~~~~~~  419 (502)
                             .++ ++.+..+..+..+++.+-.   .++.++..++.++|.+.|+++. .+.++.  .....++.+.+.+.. 
T Consensus       284 -------~t~-~~~p~~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~l~~l~~~~~~i~~vrg~Gl~~~i~~~~~~-  351 (408)
T PRK04612        284 -------TTF-GGNPLAAAVARVALRKLAS---PQIAANVARQSAALRAGLEALNAEFGVFAQVRGRGLMLGAVLAPAH-  351 (408)
T ss_pred             -------CCC-CCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeccceEEEEEecCch-
Confidence                   011 1112233334444444422   3567778888888888887641 122221  122234444443210 


Q ss_pred             hhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144          420 MDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHL  499 (502)
Q Consensus       420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~  499 (502)
                                               ......+.+.+.++|.++..    .+...+|++.. ...+++||+++++.++++.
T Consensus       352 -------------------------~~~a~~i~~~l~~~Gvlv~~----~g~~~lRl~Pp-l~it~eeid~~l~~l~~~l  401 (408)
T PRK04612        352 -------------------------AGQAGAILDLAAEHGLLLLQ----AGPDVLRFVPA-LNLTDAELADGLARLRLAL  401 (408)
T ss_pred             -------------------------hhHHHHHHHHHHHCCeEEee----CCCCEEEEcCC-ccCCHHHHHHHHHHHHHHH
Confidence                                     12235677778888965432    24468999863 5567889999999998876


Q ss_pred             Hh
Q 037144          500 EA  501 (502)
Q Consensus       500 ~~  501 (502)
                      .+
T Consensus       402 ~~  403 (408)
T PRK04612        402 AD  403 (408)
T ss_pred             HH
Confidence            54

>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]

Probab=99.47  E-value=8.1e-12  Score=127.83  Aligned_cols=231  Identities=18%  Similarity=0.201  Sum_probs=166.4

Q ss_pred             HHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCC
Q 037144          121 VMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRK  200 (502)
Q Consensus       121 ~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~  200 (502)
                      ..+..++.||.+.++        ++++|.|.||...+.+...           +++.|++....|-|+..+.-+.|+   
T Consensus        75 Aqe~aA~~fgAd~ty--------FvvNGTS~ank~vi~a~~~-----------~GD~VLvdRN~HKSi~~glilaGa---  132 (557)
T COG1982          75 AQELAARVFGADHTY--------FVVNGTSTANKAVINAVLT-----------PGDKVLVDRNCHKSIHHGLILAGA---  132 (557)
T ss_pred             HHHHHHHHhCCCceE--------EEECCccHHHHHHHHhhcC-----------CCCEEEecCCccHHHHHHHHHcCC---
Confidence            447789999998864        7788888899776666554           789999999999999999999999   


Q ss_pred             CEEEEecCCCC----CcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccccccc
Q 037144          201 NIRAIKTTKSS----SYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSA  276 (502)
Q Consensus       201 ~v~~v~~~~~~----~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~  276 (502)
                      ..+++....+.    -+.++.+.+++++.+.....   .++++|. .|..|..-++++|.+.++.+++|+.+|.+++...
T Consensus       133 ~Pvyl~p~~np~~gi~ggI~~~~~~~~l~~~~~~~---k~~vitn-pTYdGv~~n~~~i~~~~~~~~a~v~~deah~~~~  208 (557)
T COG1982         133 TPVYLEPSRNPLYGIIGGIPLETFKEALLAHPDAE---KLAVITN-PTYDGVCYNLRKIVELLHHYGAWVLYDEAHPAHF  208 (557)
T ss_pred             ceEEecCCCCccccccCCCCHHHHHHHHHhChhhh---eeEEEec-CccceEeecHHHHHHHHhhcCceEEhhhcCcccc
Confidence            88888664432    26889999999987654321   2555555 4589999999999999999999999999998876


Q ss_pred             ccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCc-----hhhhhhh----cCCcccccCccCCCCCcccccCC
Q 037144          277 CICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDP-----SCLLSTL----STNPQYLKNEATDQEPKEQEVGY  347 (502)
Q Consensus       277 ~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~-----~~l~~~~----~~~~~yl~~~~~~~~~~~~~~~~  347 (502)
                      -.++..... .--..+|.++-|.||.+++-..++.+.+++.     ..+.+++    +.+|.|.-.              
T Consensus       209 ~~~~~l~~~-~~~~~~~~~tqS~HK~l~alSQaS~iHv~~~~~~~~~r~nea~~~h~STSPsY~l~--------------  273 (557)
T COG1982         209 DFSPMLPES-ALNGGADFVTQSTHKLLAALSQASMIHVKDGRAVNHERFNEALMMHQSTSPSYPLM--------------  273 (557)
T ss_pred             cccccCcch-hhhcCceEEEechhhhhhhhhhhHHHhhCCCccCCHHHHHHHHHHHccCCchHHHH--------------
Confidence            655433221 1113799999999999998888899998873     1111111    111112110              


Q ss_pred             CcccccCCCCCCchHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC
Q 037144          348 KDWQITLCRRFRSLKLWVVIRNF---GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR  405 (502)
Q Consensus       348 ~~~~~~~sr~~~al~~~~~l~~~---g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~  405 (502)
                                 .++-+  +-+..   |+.-+++-++...+.++.+++...++++|+++.++
T Consensus       274 -----------ASlD~--Ar~~~~~~G~~l~~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~  321 (557)
T COG1982         274 -----------ASLDV--ARMQEGNAGRELWQEVIDEAIDFRKALRRLINEIGFFPVLQPE  321 (557)
T ss_pred             -----------HHHHH--HHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCeeecccc
Confidence                       12222  11122   44445555888899999999999999899998765

>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase

Probab=99.46  E-value=3.1e-11  Score=124.96  Aligned_cols=310  Identities=10%  Similarity=0.023  Sum_probs=160.2

Q ss_pred             HHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCC-CchhHHHHHHHcCC
Q 037144          119 NIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQ-THCAFQKAAQIVGI  197 (502)
Q Consensus       119 ~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~-~H~s~~~aa~~~Gl  197 (502)
                      .++.+.|++.+.-.+        ..+|++|||+|+..|+..+|...         ++..|++... .|-.......+.+-
T Consensus        91 ~~lae~l~~~~~~~~--------~v~~~~sGseA~e~Alk~ar~~~---------gr~~ii~~~~~yhG~~~~~~~~~~~  153 (423)
T TIGR00713        91 ILLAKEIISRVPSVE--------MVRFVNSGTEATMSAVRLARGYT---------GRDKIIKFEGCYHGHHDALLVKAGS  153 (423)
T ss_pred             HHHHHHHHHhCCccc--------EEEEeCCHHHHHHHHHHHHHHhh---------CCCEEEEEcCCCCCChhhhhccccC
Confidence            345556666654322        58999999999999999998752         2334444433 44332222221111


Q ss_pred             CCC----------------CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHH
Q 037144          198 DRK----------------NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCD  257 (502)
Q Consensus       198 g~~----------------~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~  257 (502)
                      |..                .+..+|       ..|+++|++++++.   +..+.+|++....+++|.+-|    +++|.+
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~d~~~l~~~i~~~---~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~  223 (423)
T TIGR00713       154 GAATLGLPTSPGVPEDFAKLTLVLP-------YNDLEALEEVFEEY---GEEIAGVIVEPVAGNMGVVPPKPEFLAGLRA  223 (423)
T ss_pred             cccccCCCCCCCCCcccccceEEeC-------CCCHHHHHHHHHHc---CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHH
Confidence            100                111121       12899999998642   123445666533333788866    789999


Q ss_pred             HHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcc-cccCccC
Q 037144          258 VAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQ-YLKNEAT  336 (502)
Q Consensus       258 i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~-yl~~~~~  336 (502)
                      +|++||+++++|.+|.++. ..........++ ..|.++  +.|.++..+..|+++.++. . .+.+..... +...   
T Consensus       224 l~~~~~~llI~DEv~~g~r-~g~~~~~~~~~~-~pDi~t--~sK~l~~G~pig~v~~~~~-i-~~~~~~~~~~~~~~---  294 (423)
T TIGR00713       224 LTEEYGSLLIFDEVMTGFR-VALGGAQEYFGV-EPDLTT--LGKIIGGGLPVGAFGGRRE-I-MERLAPEGPVYQAG---  294 (423)
T ss_pred             HHHHhCCEEEEEccccccc-cCcchhHHHhCC-Ccchhh--hhhhhcCCCceeeeeEHHH-H-HHhhCcCCCeeecc---
Confidence            9999999999999997663 211111111222 356554  6799986566788877533 2 223321100 1100   


Q ss_pred             CCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEee
Q 037144          337 DQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVA-NLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVT  415 (502)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~-g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~  415 (502)
                                    +. ++.+....+..++++.+..+ .++...+....+.+.|.+.+++. ++..-......++.+.+.
T Consensus       295 --------------T~-~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~v~~~g~~~~v~~~  358 (423)
T TIGR00713       295 --------------TL-SGNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLEDT-GIPHTVNRVGSMFSLFFT  358 (423)
T ss_pred             --------------CC-CCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEeeccEEEEEEe
Confidence                          00 11111223333445444322 23333344444455555555555 333211122344444443


Q ss_pred             cCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHH
Q 037144          416 PSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVV  495 (502)
Q Consensus       416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l  495 (502)
                      .....+.              ......+ ......+.+.+.++|.+ +.+.   +...+|++..   .++++|+++++.|
T Consensus       359 ~~~~~~~--------------~~~~~~~-~~~~~~~~~~l~~~Gv~-v~~~---~~~~~~l~~~---~t~~~i~~~~~~l  416 (423)
T TIGR00713       359 EEEVTNY--------------ADAKKSD-TELFAKFFHEMLDKGVF-LPPS---QFEACFLSAA---HTEEDIENTIEAA  416 (423)
T ss_pred             cCCCCCh--------------hhhhccc-HHHHHHHHHHHHHCCeE-EecC---CccceeeECC---CCHHHHHHHHHHH
Confidence            2110000              0000000 12234677788888854 4432   2235787653   4677999999999


Q ss_pred             HHHHHhC
Q 037144          496 QEHLEAF  502 (502)
Q Consensus       496 ~~~~~~~  502 (502)
                      .++.+++
T Consensus       417 ~~~l~~~  423 (423)
T TIGR00713       417 EEVFAEL  423 (423)
T ss_pred             HHHHhhC
Confidence            9887653

This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.

>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]

Probab=99.46  E-value=4.7e-11  Score=117.24  Aligned_cols=293  Identities=14%  Similarity=0.098  Sum_probs=177.6

Q ss_pred             HHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCC-eEEEeCCCCchhHHHHH----
Q 037144          118 ENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISK-LVVYSSDQTHCAFQKAA----  192 (502)
Q Consensus       118 e~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~-~~v~~s~~~H~s~~~aa----  192 (502)
                      ..++.++|+++.+ ..+       .++|++||+|||-.|+..||.+..      +..+ -+|......|-.-.-+.    
T Consensus        86 ~~~la~~L~~~s~-~~d-------~vff~NSGaEA~EaAiKlARk~~~------~~~k~~Iia~~nsFHGRT~galS~t~  151 (404)
T COG4992          86 QAELAEKLVELSP-FAD-------RVFFCNSGAEANEAALKLARKYTG------DPEKSKIIAFENSFHGRTLGALSATG  151 (404)
T ss_pred             HHHHHHHHHhhCc-ccc-------EEEEcCCcHHHHHHHHHHHHHHcC------CCCCcEEEEEcCCcCCccceeeeccC
Confidence            3456677788876 222       589999999999999999998743      1122 33444444553211111    


Q ss_pred             -----HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHHHHHhC
Q 037144          193 -----QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDVAKQFG  263 (502)
Q Consensus       193 -----~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~~~~g  263 (502)
                           +-.+--...++.+|.+       |+++|+++|++++.      .|++---.-..|.+-|    ++++.++|++||
T Consensus       152 ~~ky~~~F~Pl~~g~~~vpfn-------Di~al~~ai~~~ta------AvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g  218 (404)
T COG4992         152 QPKYRKGFGPLLPGFRHVPFN-------DIEALEAAIDEDTA------AVIVEPIQGEGGVIPAPPEFLKALRELCDEHG  218 (404)
T ss_pred             ChhhccCCCCCCCCceecCCC-------CHHHHHHHhccCeE------EEEEecccCCCCCCCCCHHHHHHHHHHHHHhC
Confidence                 1111111245666653       89999999998664      6777665556677633    889999999999


Q ss_pred             CEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCccc
Q 037144          264 IWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQ  343 (502)
Q Consensus       264 ~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~  343 (502)
                      +.++.|..+.|.-.-..-+..-..++ ..|.+++.  |.++..++.|.++.+ .... ..++..  --.+          
T Consensus       219 ~LLI~DEVQtG~GRTGk~fA~e~~gV-~PDI~tla--K~LgGG~PigA~la~-~~~~-~~~~~G--~HgS----------  281 (404)
T COG4992         219 ALLILDEVQTGLGRTGKLFAYEHYGV-EPDILTLA--KALGGGFPIGAMLAT-EEIA-SAFTPG--DHGS----------  281 (404)
T ss_pred             eEEEEeccccCCCccchHHHHHHhCC-CCCEEEee--ccccCCccceeeEEc-hhhh-hcCCCC--cccC----------
Confidence            99999999977643222222111233 57888876  999888889999887 3211 111110  0000          


Q ss_pred             ccCCCcccccCCCCCCchHHH---HHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEecCC--CeeEEEEEeecC
Q 037144          344 EVGYKDWQITLCRRFRSLKLW---VVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK-RFEVAFPR--NFSLVCFRVTPS  417 (502)
Q Consensus       344 ~~~~~~~~~~~sr~~~al~~~---~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~-~~~l~~~~--~~~~v~f~~~~~  417 (502)
                             |+ ++   .+++..   ++++.+-.+   ++.++..++.++|.++|+++. .+.++...  ..-++-+.+.+.
T Consensus       282 -------Tf-GG---NpLacAv~~a~l~~l~~e---~ll~~v~~~g~~~~~~L~~l~~~~~~v~~vRG~GLmiGiel~~~  347 (404)
T COG4992         282 -------TF-GG---NPLACAVALAVLEVLLEE---GLLENVREKGEYLLQRLRELKRRYPLVKEVRGRGLMIGIELKEP  347 (404)
T ss_pred             -------CC-Cc---CHHHHHHHHHHHHHHcch---hHHHHHHHHHHHHHHHHHHHhhcCCceeeeecceeEEEEEecCc
Confidence                   00 12   334443   344444443   456667778888888887752 22233221  122344444332


Q ss_pred             cchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHH
Q 037144          418 AVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQE  497 (502)
Q Consensus       418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~  497 (502)
                      .                            ....+.+.+.++|.+....    +..++|+... ...++++|+.+++++++
T Consensus       348 ~----------------------------~a~~~~~~~~~~gvL~~~a----~~~ViR~~Pp-L~i~~eei~~~~~~l~~  394 (404)
T COG4992         348 Y----------------------------RARDIVRALREEGVLVLPA----GPNVIRFLPP-LVITEEEIDEALDALER  394 (404)
T ss_pred             c----------------------------cHHHHHHHHHHCCeEEecC----CCCeEEecCC-ccCCHHHHHHHHHHHHH
Confidence            0                            1356777888889654333    3449999863 56788899999999998


Q ss_pred             HHHh
Q 037144          498 HLEA  501 (502)
Q Consensus       498 ~~~~  501 (502)
                      +++.
T Consensus       395 ~l~~  398 (404)
T COG4992         395 ALAA  398 (404)
T ss_pred             HHHH
Confidence            8764

>PRK08088 4-aminobutyrate aminotransferase; Validated

Probab=99.45  E-value=1.8e-10  Score=119.23  Aligned_cols=315  Identities=10%  Similarity=0.051  Sum_probs=168.7

Q ss_pred             HHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCC
Q 037144          118 ENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGI  197 (502)
Q Consensus       118 e~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Gl  197 (502)
                      ..++.+.+.+..+.+..      ...+|+++|++|+..|+..+|... +       ++.+|.++...|....-+....+-
T Consensus        86 ~~~la~~l~~~~~~~~~------~~~~f~~sGsea~e~Alklar~~~-~-------r~~iv~~~~~yHG~~~~~~~~~~~  151 (425)
T PRK08088         86 YLELCEKMNQKVPGDFA------KKTLLVTTGSEAVENAVKIARAAT-K-------RSGVIAFTGAYHGRTHYTLALTGK  151 (425)
T ss_pred             HHHHHHHHHHhCCCCCC------CEEEEeCCcHHHHHHHHHHHHHHh-C-------CCeEEEECCccCCccHHHHHhhCC
Confidence            34677778887764321      157899999999999999998642 1       334555566566554333332221


Q ss_pred             --------C--CCCEEEEecCCCCCcccC----HHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHHH
Q 037144          198 --------D--RKNIRAIKTTKSSSYGLS----AESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDVA  259 (502)
Q Consensus       198 --------g--~~~v~~v~~~~~~~~~~d----~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~  259 (502)
                              +  ...+..++...+.+ .++    ++.|++++++.. .+..+.+|++.......|.+-+    +++|.++|
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~l~~~l~~~~-~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~  229 (425)
T PRK08088        152 VNPYSAGMGLMPGHVYRALYPCPLH-GVSEDDAIASIERIFKNDA-APEDIAAIIIEPVQGEGGFYAASPAFMQRLRALC  229 (425)
T ss_pred             CCccccCCCCCCCCcEEcCCCcccc-CccHHHHHHHHHHHHHhcc-CCCceEEEEECcccCCCCCcCCCHHHHHHHHHHH
Confidence                    0  11122222211111 122    456887775321 2234556666665555566655    99999999


Q ss_pred             HHhCCEEEeecccccccccCccchhh-hcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCC
Q 037144          260 KQFGIWVHVDAAYAGSACICPEFRHF-IDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQ  338 (502)
Q Consensus       260 ~~~g~~lhVDaA~g~~~~~~~~~~~~-~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~  338 (502)
                      ++||+++++|.+|++.... ...... ..++ ..|.  .++.|.++..+..|+++.+.. . .+.+.... +..      
T Consensus       230 ~~~~~~lI~Dev~~g~g~~-g~~~~~~~~~~-~pdi--~s~sK~l~~G~rig~v~~~~~-~-~~~~~~~~-~~~------  296 (425)
T PRK08088        230 DEHGIMLIADEVQTGAGRT-GTLFAMEQMGV-AADL--TTFAKSIAGGFPLAGVTGRAE-V-MDAIAPGG-LGG------  296 (425)
T ss_pred             HHcCCEEEEeccccCCCcC-cchhHHhhcCC-CCCE--EEEeccccCCCcceeeEecHH-H-HhhcCCCC-CCC------
Confidence            9999999999999864322 111110 1122 3454  455799986677888887432 2 22221110 000      


Q ss_pred             CCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHh----cCCCeEEecCCCeeEEEEEe
Q 037144          339 EPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVT----SDKRFEVAFPRNFSLVCFRV  414 (502)
Q Consensus       339 ~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~----~~~~~~l~~~~~~~~v~f~~  414 (502)
                                  +..    ...+...+++..+..-...+++++..++.+++++.|.    +.|.+.-+..+ ..++.+.+
T Consensus       297 ------------t~~----~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g~-G~~~~l~l  359 (425)
T PRK08088        297 ------------TYA----GNPIACAAALAVLKVFEQENLLQKANALGEKLKDGLLAIAEKHPEIGDVRGL-GAMIAIEL  359 (425)
T ss_pred             ------------CCC----cCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEecc-ceEEEEEE
Confidence                        000    1223333333333211223444555555555555553    34443323222 33445555


Q ss_pred             ecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHH
Q 037144          415 TPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTV  494 (502)
Q Consensus       415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~  494 (502)
                      .......                  ..  .......+.+++.++|.++.+...+  ..++|+++. ...++++|++.++.
T Consensus       360 ~~~~~~~------------------~p--~~~~~~~l~~~~~~~Gv~~~~~~~~--~~~iRl~~~-~~~t~~ei~~~i~~  416 (425)
T PRK08088        360 FEDGDHS------------------KP--NAKLTAQIVARARDKGLILLSCGPY--YNVLRILVP-LTIEDAQIRQGLEI  416 (425)
T ss_pred             ecCCCCC------------------CC--CHHHHHHHHHHHHhCCCEEecCCCC--CCEEEEECC-CCcCHHHHHHHHHH
Confidence            3210000                  00  0233567888888889765433222  367999985 34567799999999


Q ss_pred             HHHHHHh
Q 037144          495 VQEHLEA  501 (502)
Q Consensus       495 l~~~~~~  501 (502)
                      |.++.++
T Consensus       417 l~~~l~~  423 (425)
T PRK08088        417 IAQCFDE  423 (425)
T ss_pred             HHHHHHh
Confidence            9988764

>PRK06058 4-aminobutyrate aminotransferase; Provisional

Probab=99.43  E-value=7.3e-10  Score=115.10  Aligned_cols=320  Identities=11%  Similarity=0.058  Sum_probs=171.8

Q ss_pred             HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEE-eCCCCchhHHHHHHH
Q 037144          116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVY-SSDQTHCAFQKAAQI  194 (502)
Q Consensus       116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~-~s~~~H~s~~~aa~~  194 (502)
                      +...++.+.|.+++.....      ...+|+++||+|+..|+..||...         ++..|+ .....|-...-+..+
T Consensus        99 ~~~~~la~~l~~~~p~~~~------~~v~f~~sGseA~e~AlklAr~~t---------gr~~ii~~~~~yHG~t~~al~~  163 (443)
T PRK06058         99 EGYVAVAEQLNRLTPGDHE------KRSALFNSGAEAVENAVKIARSYT---------GRQAVVVFDHAYHGRTNLTMAL  163 (443)
T ss_pred             HHHHHHHHHHHHhCCCCCC------CEEEEeCCcHHHHHHHHHHHHHhh---------CCCeEEEECCCcCcChHHHHhh
Confidence            4555677888887743211      147899999999999999998752         233344 444445444344333


Q ss_pred             cCC--------C--CCCEEEEecCCCCC----cccCH-HHHHHHHHHHHh--cCCccEEEEEecCCccccccCC----hh
Q 037144          195 VGI--------D--RKNIRAIKTTKSSS----YGLSA-ESVLSQINLDVE--AELIPLFLCATVGTTAITAVDP----LK  253 (502)
Q Consensus       195 ~Gl--------g--~~~v~~v~~~~~~~----~~~d~-~~Le~~i~~~~~--~g~~p~~Vv~t~gtt~~G~idp----l~  253 (502)
                      .+.        +  ...+..+|....-+    ...+. +.+++.++.-.+  .+..+.+|++.......|.+-|    ++
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~  243 (443)
T PRK06058        164 TAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQVGADNLAAVIIEPIQGEGGFIVPAEGFLP  243 (443)
T ss_pred             cCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHHHHHHHhhCCCceEEEEECCccCCCCCcCCCHHHHH
Confidence            221        1  11234444211000    00111 222222221111  1233556666554444566644    99


Q ss_pred             HHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccC
Q 037144          254 PLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKN  333 (502)
Q Consensus       254 eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~  333 (502)
                      +|.++|++||+.+++|.++.|+......+.....++ ..|.++++  |.++..+..|.++.++. . .+.+...  ....
T Consensus       244 ~lr~lc~~~gillI~DEV~tGfgRtG~~fa~~~~gv-~PDiv~~g--K~l~~G~Pi~av~~~~~-i-~~~~~~~--~~~~  316 (443)
T PRK06058        244 ALLEWCRENGVVFIADEVQTGFARTGAWFACEHEGI-VPDLITTA--KGIAGGLPLSAVTGRAE-I-MDAPHPG--GLGG  316 (443)
T ss_pred             HHHHHHHHcCCEEEEeccccCCCcChhhhHHHhcCC-CCCEEEEc--ccccCCCccEEEEEcHH-H-HhhccCC--CCCC
Confidence            999999999999999999977543222111111234 47888885  99987777888887643 2 2222111  0000


Q ss_pred             ccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEec--CCCeeEE
Q 037144          334 EATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK-RFEVAF--PRNFSLV  410 (502)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~-~~~l~~--~~~~~~v  410 (502)
                                       |. .+.+....+..++++.+..+   ++.++..++.++|.++|+++. ...++.  .....++
T Consensus       317 -----------------T~-~gnpl~~aaa~a~L~~~~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~  375 (443)
T PRK06058        317 -----------------TY-GGNPVACAAALAAIETIEED---DLVARARQIEALMTDRLRALAAEDDRIGDVRGRGAMI  375 (443)
T ss_pred             -----------------CC-CCCHHHHHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHHHHHHhhCCcEEeeeccceEE
Confidence                             10 11111222333344433232   456777777888888886631 122221  2233445


Q ss_pred             EEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHH
Q 037144          411 CFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRA  490 (502)
Q Consensus       411 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~  490 (502)
                      .+.+.+...                    . ....++...+.+.+.++|.++.....+  ..+||+... ...++++|++
T Consensus       376 ~i~~~~~~~--------------------~-~~~~~~~~~l~~~~~~~Gv~~~~~~~~--~~~lr~~Pp-l~~t~~~i~~  431 (443)
T PRK06058        376 AIELVKPGT--------------------T-EPDAELTKALAAAAHAAGVIVLTCGTY--GNVIRLLPP-LVIGDELLRE  431 (443)
T ss_pred             EEEEecCCC--------------------C-CCcHHHHHHHHHHHHHCCeEEeccCCC--CCEEEEECC-CccCHHHHHH
Confidence            555533210                    0 000234567788888889754332221  248999764 4467789999


Q ss_pred             HHHHHHHHHHhC
Q 037144          491 AWTVVQEHLEAF  502 (502)
Q Consensus       491 ~~~~l~~~~~~~  502 (502)
                      ++++|+++.+++
T Consensus       432 ~~~~l~~~l~~~  443 (443)
T PRK06058        432 GLDVLEAALADL  443 (443)
T ss_pred             HHHHHHHHHHhC
Confidence            999999987754

>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase

Probab=99.43  E-value=3.3e-10  Score=116.57  Aligned_cols=315  Identities=10%  Similarity=0.053  Sum_probs=170.6

Q ss_pred             HHHHHHHHHHHHHhcCCCCccCcCCCCcEEE-cCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHH
Q 037144          115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVI-QGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQ  193 (502)
Q Consensus       115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~-t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~  193 (502)
                      ++...++.+.|.+++..|...    ....+| +++||+|+..|++.||...    +    +..+|......|-...-+..
T Consensus        77 ~~~~~~lae~l~~~~~~~~~~----~~~~~f~~~sGseA~e~AlklAr~~t----g----r~~ii~~~~~yHG~t~~als  144 (412)
T TIGR02407        77 TEAKREFLETFNEIILKPRGL----DYKVQFPGPTGTNAVESALKLARKVT----G----RSNVVSFTNAFHGMTLGSLS  144 (412)
T ss_pred             cHHHHHHHHHHHHhccCccCC----CceEEEeCCCchHHHHHHHHHHhhhc----C----CCeEEEECCCcCCchHHHHH
Confidence            445556777777765323211    002445 5899999999999998751    1    22234444445544333333


Q ss_pred             HcCC-------C--CCCEEEEecCCCCCc-ccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc----CChhHHHHHH
Q 037144          194 IVGI-------D--RKNIRAIKTTKSSSY-GLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV----DPLKPLCDVA  259 (502)
Q Consensus       194 ~~Gl-------g--~~~v~~v~~~~~~~~-~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i----dpl~eI~~i~  259 (502)
                      ..|.       |  ...+..+|.....+. .-+++.+++.+.+.......+.+|++.......|.+    +-+++|.++|
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc  224 (412)
T TIGR02407       145 VTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLC  224 (412)
T ss_pred             hcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHH
Confidence            3221       1  123455554210000 124777888886432111234566665555556664    4489999999


Q ss_pred             HHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCC-CCcceEEEeeCchhhhhhhcCCcccccCccCCC
Q 037144          260 KQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFT-TLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQ  338 (502)
Q Consensus       260 ~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~-p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~  338 (502)
                      ++||+++++|.++.|+......+.....++ ..|.++++  |+++. .+..|++++++..   +.+.  ......     
T Consensus       225 ~~~g~llI~DEV~tG~GRtG~~~a~~~~~v-~PDi~~~~--K~lg~~G~pigav~~~~~~---~~~~--~~~~~~-----  291 (412)
T TIGR02407       225 RRHDILLIVDDIQAGCGRTGTFFSFEPAGI-EPDIVCLS--KSISGYGLPLALTLIKPEL---DVWK--PGEHNG-----  291 (412)
T ss_pred             HHcCCEEEEechhhCCCccchhHHhcccCC-CCCEEEec--hhccCCccceeEEEEchhh---hccC--CCccCC-----
Confidence            999999999999976532211111111233 57888765  99976 6778999886542   2221  000000     


Q ss_pred             CCcccccCCCcccccCCCCCCchHHHHHHHH-hcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEecCCCeeEEEEE
Q 037144          339 EPKEQEVGYKDWQITLCRRFRSLKLWVVIRN-FGVANLRNFIRSHVGMAKLFERLVTS----DKRFEVAFPRNFSLVCFR  413 (502)
Q Consensus       339 ~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~-~g~~g~~~~~~~~~~la~~l~~~l~~----~~~~~l~~~~~~~~v~f~  413 (502)
                                  ++ .+.+.......++++. +..+   ++.++..++.++|+++|++    .|++..-......++.+.
T Consensus       292 ------------T~-~gnpl~~aaa~a~l~~~i~~~---~l~~~~~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~l~  355 (412)
T TIGR02407       292 ------------TF-RGNNLAFVTATAALEYYWSDD---AFEKAVQRKSEIIQERLDRIVAEYPELIKQVRGRGLMQGIE  355 (412)
T ss_pred             ------------CC-CccHHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHHhhCCCceEeeecceeEEEEE
Confidence                        11 0111111233445553 3333   3445555666666666543    443321111122344555


Q ss_pred             eecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHH
Q 037144          414 VTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWT  493 (502)
Q Consensus       414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~  493 (502)
                      +.+                            ......+.+.+.++|.++. +.. .+...||++.. ...+++|++++++
T Consensus       356 l~~----------------------------~~~~~~~~~~~~~~Gv~v~-~~~-~~~~~lr~~p~-l~~t~~~i~~~~~  404 (412)
T TIGR02407       356 CGD----------------------------GDLAGKIAKAAFENGLIIE-TSG-PNDEVIKLLPP-LTIDEETLQQGLD  404 (412)
T ss_pred             ecC----------------------------hHHHHHHHHHHHHCCCEEe-ccC-CCCCEEEEECC-CCCCHHHHHHHHH
Confidence            532                            1234577888888897543 221 12357999874 5577789999999


Q ss_pred             HHHHHHHh
Q 037144          494 VVQEHLEA  501 (502)
Q Consensus       494 ~l~~~~~~  501 (502)
                      .|.++.++
T Consensus       405 ~l~~~l~~  412 (412)
T TIGR02407       405 ILEQAVEE  412 (412)
T ss_pred             HHHHHHhC
Confidence            99988753

Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.

>PRK06541 hypothetical protein; Provisional

Probab=99.43  E-value=4.9e-10  Score=116.51  Aligned_cols=330  Identities=11%  Similarity=0.046  Sum_probs=175.9

Q ss_pred             HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144          116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV  195 (502)
Q Consensus       116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~  195 (502)
                      +...++.+.|.+++.-+-       ...+|+++||+|+..|+..||..... .|..+ +..+|......|-...-+....
T Consensus        95 ~~~~~la~~l~~~~p~~~-------~~v~f~~sGseAve~AlklAr~~~~~-~g~~~-r~~ii~~~~~yHG~t~~a~s~~  165 (460)
T PRK06541         95 PPAIELAERLAALAPGDL-------NRVFFTTGGSEAVESAWKLAKQYFKL-TGKPG-KHKVISRAIAYHGTTQGALAIT  165 (460)
T ss_pred             HHHHHHHHHHHHhCCCCc-------CEEEEcCCcHHHHHHHHHHHHHHHHh-cCCCC-ccEEEEEcCcccCcchhhhcCc
Confidence            334456677777753221       15799999999999999999875321 11111 2234444444554433333332


Q ss_pred             CCC---------CCCEEEEecCCCCC---cccC--------HHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----
Q 037144          196 GID---------RKNIRAIKTTKSSS---YGLS--------AESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----  251 (502)
Q Consensus       196 Glg---------~~~v~~v~~~~~~~---~~~d--------~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----  251 (502)
                      |..         ...+..+|....-.   +.-+        ++.|++.++..  ....+.+|++....+..|.+-|    
T Consensus       166 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~Aavi~EPv~g~~G~~~~~~~y  243 (460)
T PRK06541        166 GLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFE--GPDTVAAVFLEPVQNAGGCFPPPPGY  243 (460)
T ss_pred             CChhhccccCCCCCCcEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhc--CCCCEEEEEECCccCCCCCccCCHHH
Confidence            221         11234444321000   1112        35667666532  1233556666666777888888    


Q ss_pred             hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-cceEEEeeCchhhhhhhcCCc-c
Q 037144          252 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-DCCCLWVKDPSCLLSTLSTNP-Q  329 (502)
Q Consensus       252 l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~~-~  329 (502)
                      +++|.++|++||+++++|.++.|+......+.....++ ..|.+++  .|.++..+ ..|.++.+++. . +.+.... .
T Consensus       244 l~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv-~PDivt~--gK~l~~G~~pigav~~~~~i-~-~~~~~~~~~  318 (460)
T PRK06541        244 FERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGY-VPDIITC--AKGITSGYSPLGAMIASDRL-F-EPFLDGPTM  318 (460)
T ss_pred             HHHHHHHHHHcCCEEEEechhhCCCcCchhhhhhhcCC-CCCEEEe--cccccCCccceeEEEEcHHH-H-HHhhcCCCc
Confidence            99999999999999999999965532222111111233 5788774  69888654 57888776442 2 2232111 1


Q ss_pred             cccCccCCCCCcccccCCCcccccCCCCCCchHHHH---HHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec--C
Q 037144          330 YLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWV---VIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAF--P  404 (502)
Q Consensus       330 yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~---~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~--~  404 (502)
                      ++...                |.    ...++.+.+   +++.+..+   .+.++..++.++|.+.|+++....++.  .
T Consensus       319 ~~~~~----------------T~----~gnp~~~aaala~l~~l~~~---~~~~~~~~~g~~l~~~L~~l~~~~~v~~vr  375 (460)
T PRK06541        319 FLHGY----------------TF----GGHPVSAAVALANLDIFERE---GLLDHVRDNEPAFRATLEKLLDLPIVGDVR  375 (460)
T ss_pred             cccCC----------------CC----CCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHhhcCCCeEEEE
Confidence            11100                00    112333333   34443333   456778888899998887763222211  1


Q ss_pred             CCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCc
Q 037144          405 RNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTM  484 (502)
Q Consensus       405 ~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~  484 (502)
                      ....++.+.+......           . .+. . +..........+.+.+.++|.+. .+. ..+..+||++.. ...+
T Consensus       376 g~Gl~~~ie~~~~~~~-----------~-~~~-~-~~~~~~~~~~~~~~~l~~~Gi~~-~~~-~~g~~~lrl~Pp-l~~t  438 (460)
T PRK06541        376 GDGYFYGIELVKDKAT-----------K-ETF-T-DDESERLLRGFLSPALFEAGLYC-RAD-DRGDPVVQLAPP-LISG  438 (460)
T ss_pred             ecceEEEEEEecCccc-----------c-cCC-c-chhhhhhHHHHHHHHHHhCCeEE-Eec-CCCCCEEEEECC-CCCC
Confidence            2223444444321000           0 000 0 00000112235677888888643 331 124468999875 4467


Q ss_pred             HHHHHHHHHHHHHHHHh
Q 037144          485 ESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       485 ~~di~~~~~~l~~~~~~  501 (502)
                      ++|||++++++.++.++
T Consensus       439 ~~~id~~~~~l~~~l~~  455 (460)
T PRK06541        439 QEEFDEIEQILRSVLTE  455 (460)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            77999999999988754

>PRK06777 4-aminobutyrate aminotransferase; Provisional

Probab=99.42  E-value=7.9e-10  Score=114.06  Aligned_cols=314  Identities=12%  Similarity=0.064  Sum_probs=171.1

Q ss_pred             HHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCe-EEEeCCCCchhHHHHHHHcC
Q 037144          118 ENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKL-VVYSSDQTHCAFQKAAQIVG  196 (502)
Q Consensus       118 e~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~-~v~~s~~~H~s~~~aa~~~G  196 (502)
                      ..++.+.|.+++..+..      ...+|+++||+|+..|++.||...         ++. +|......|-...-+..+.|
T Consensus        85 ~~~la~~l~~~~p~~~~------~~~~f~~sGseA~e~AlklAr~~t---------gr~~ii~~~~~yHG~t~~~~s~t~  149 (421)
T PRK06777         85 YVTLAERINALAPIDGP------AKTAFFTTGAEAVENAVKIARAYT---------GRPGVIAFGGAFHGRTLLTMALTG  149 (421)
T ss_pred             HHHHHHHHHHhCCCCCC------ceEEEeCCcHHHHHHHHHHHHHhh---------CCCeEEEEcCCcCCccHHHHhhcC
Confidence            34566777777643211      157899999999999999998752         223 33344445544333333333


Q ss_pred             C--------C--CCCEEEEecCCCCCc---ccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc-CC---hhHHHHHH
Q 037144          197 I--------D--RKNIRAIKTTKSSSY---GLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV-DP---LKPLCDVA  259 (502)
Q Consensus       197 l--------g--~~~v~~v~~~~~~~~---~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i-dp---l~eI~~i~  259 (502)
                      .        +  ...+..+|......+   .-+++.+++.+++.. .+..+.+|++.......|.. -|   +++|.++|
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~-~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc  228 (421)
T PRK06777        150 KVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADI-APDQVAAILLEPIQGEGGFNVAPPEFMSALRTLC  228 (421)
T ss_pred             CCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhcc-CCCceEEEEECCccCCCCCccCCHHHHHHHHHHH
Confidence            1        0  012333333211000   123667777775321 12234566666555556643 33   99999999


Q ss_pred             HHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCC
Q 037144          260 KQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQE  339 (502)
Q Consensus       260 ~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~  339 (502)
                      ++||+++++|.+|.++......+.....++ ..|.++  ..|.++..+..|+++.++. . .+.+....  ...      
T Consensus       229 ~~~g~llI~DEv~tg~gr~g~~~~~~~~~~-~pDiv~--~sK~l~~G~pigav~~~~~-i-~~~~~~~~--~~~------  295 (421)
T PRK06777        229 DEHGILLIADEVQTGFARTGKLFAMEYYDV-KPDLIT--MAKSLGGGMPISAVVGRAE-V-MDAPAPGG--LGG------  295 (421)
T ss_pred             HHcCCEEEEechhhCCccCCchhhhhhcCC-CCCEEe--eehhhcCCCceEEEEEcHH-H-HhccCCCC--CCC------
Confidence            999999999999987533221111001122 467665  5699886677888887532 2 22222110  000      


Q ss_pred             CcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEecCCCeeEEEEEee
Q 037144          340 PKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD----KRFEVAFPRNFSLVCFRVT  415 (502)
Q Consensus       340 ~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~----~~~~l~~~~~~~~v~f~~~  415 (502)
                                 ++ ++.+....+..++|..+..   .++.++..++.++|++.|+++    |.+.-+ .+...++.+.+.
T Consensus       296 -----------T~-~~~p~~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v-rg~G~~~~i~~~  359 (421)
T PRK06777        296 -----------TY-AGNPLAVAAALAVLDVIAE---EKLCQRALILGAHLVEVLEKAKASCPAIVDI-RARGSMVAVEFN  359 (421)
T ss_pred             -----------CC-CcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEe-cCceEEEEEEEe
Confidence                       11 1111122233334443322   456777888888888888764    433323 334444444443


Q ss_pred             cCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHH
Q 037144          416 PSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVV  495 (502)
Q Consensus       416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l  495 (502)
                      ....                     .....++...+.+++.++|.++.+...+ + .++|++.. ...++++++++++.|
T Consensus       360 ~~~~---------------------~~~~~~~~~~l~~~~~~~Gv~i~~~~~~-g-~~lr~~pp-l~i~~~~i~~~~~~l  415 (421)
T PRK06777        360 DPQT---------------------GKPSPEFTRQYQRQALEEGLLLLSCGVH-G-NVIRFLYP-LTIPDAQFSKALNIL  415 (421)
T ss_pred             cCcc---------------------CCccHHHHHHHHHHHHhCCeEEeecCCC-C-CEEEEeCC-CCCCHHHHHHHHHHH
Confidence            2100                     0001234567777788888654333222 2 48999863 346788999999999


Q ss_pred             HHHHH
Q 037144          496 QEHLE  500 (502)
Q Consensus       496 ~~~~~  500 (502)
                      .+.+.
T Consensus       416 ~~~l~  420 (421)
T PRK06777        416 TRLLA  420 (421)
T ss_pred             HHHHh
Confidence            88754

>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type

Probab=99.42  E-value=7.1e-10  Score=114.56  Aligned_cols=312  Identities=13%  Similarity=0.077  Sum_probs=169.5

Q ss_pred             HHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcC-
Q 037144          118 ENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVG-  196 (502)
Q Consensus       118 e~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~G-  196 (502)
                      +.++.+.|.+++.-...      ...+|+++||+|+..|+..||...    +    ++.+|......|-...-+..+.| 
T Consensus        78 ~~~la~~l~~~~p~~~~------~~v~f~~sGseA~e~AlklAr~~t----g----r~~ii~~~~~yHG~t~~~~~~~~~  143 (420)
T TIGR00700        78 YVALAEKLNRIAPGSGP------KKSVFFNSGAEAVENAVKIARSYT----G----RPGVVAFDHGFHGRTNMTMALTAK  143 (420)
T ss_pred             HHHHHHHHHHhCCCCCC------CEEEEeCCcHHHHHHHHHHHHHhc----C----CCcEEEECCCcCCCcHHHHHhcCC
Confidence            34566777777632111      157999999999999999998752    1    22244445555644333333322 


Q ss_pred             -------CC--CCCEEEEecCCCC---------CcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhH
Q 037144          197 -------ID--RKNIRAIKTTKSS---------SYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKP  254 (502)
Q Consensus       197 -------lg--~~~v~~v~~~~~~---------~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~e  254 (502)
                             .+  ...+..+|.....         .+.-+++.+++.+.... .+....+|++......+|.+-|    +++
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~iAavi~Epi~g~~G~~~~~~~~l~~  222 (420)
T TIGR00700       144 VMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVIDV-GANNVAALVIEPVQGEGGFIVPAKGFVPA  222 (420)
T ss_pred             CcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHHHHHhhc-CCCcEEEEEECCccCCCCCccCCHHHHHH
Confidence                   11  1134444432100         00112556776664211 2234567777665556677655    999


Q ss_pred             HHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCc
Q 037144          255 LCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNE  334 (502)
Q Consensus       255 I~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~  334 (502)
                      |.++|++||+++++|.+|.++.....-+.....++ ..|.++  +.|.++..+..|+++.++. . .+.+...  .... 
T Consensus       223 l~~lc~~~gillI~DEV~tg~gr~g~~~a~~~~~~-~pDi~~--lsK~l~~G~pig~v~~~~~-i-~~~~~~~--~~~~-  294 (420)
T TIGR00700       223 LLDWCREHGIVFIADEVQTGFARTGAMFACEHEGP-EPDLIT--TAKSLADGLPLSGVTGRAE-I-MDAPAPG--GLGG-  294 (420)
T ss_pred             HHHHHHHcCCEEEEEecccCCcccchhHHHhhcCC-CCCEEE--eeccccCCcceEEEEecHH-H-HhhcCCC--CcCC-
Confidence            99999999999999999987643221111001122 577666  5699987778888887543 2 2222111  0100 


Q ss_pred             cCCCCCcccccCCCcccccCCCCCCchHHHHH---HHHhcHHHHHHHHHHHHHHHHHHHHHHh----cCCCeEEecCCCe
Q 037144          335 ATDQEPKEQEVGYKDWQITLCRRFRSLKLWVV---IRNFGVANLRNFIRSHVGMAKLFERLVT----SDKRFEVAFPRNF  407 (502)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~---l~~~g~~g~~~~~~~~~~la~~l~~~l~----~~~~~~l~~~~~~  407 (502)
                                      ++ ++   .++...++   ++.+..+.+   .++..++.+++++.|+    +.|.+..+ .+..
T Consensus       295 ----------------T~-~~---~pl~~aaa~a~l~~l~~~~~---~~~~~~~g~~l~~~L~~l~~~~~~~~~v-rg~G  350 (420)
T TIGR00700       295 ----------------TY-AG---NPLACAAALAVLAIIESEGL---IERARQIGRLVTDRLTTLKAVDPRIGDV-RGLG  350 (420)
T ss_pred             ----------------CC-Cc---CHHHHHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHHHHHhhCCCEEEe-eccc
Confidence                            11 11   23433334   544444333   3444444555555554    34444333 2334


Q ss_pred             eEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHH
Q 037144          408 SLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESH  487 (502)
Q Consensus       408 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~d  487 (502)
                      .++.+.+.+...                     ......+...+.+.+.++|..+.+...+  ..++|++... ..++++
T Consensus       351 ~~~~i~~~~~~~---------------------~~~~~~~~~~l~~~~~~~Gv~i~p~~~f--~~~lRl~p~l-~~~~~~  406 (420)
T TIGR00700       351 AMIAVELVDPGT---------------------TEPDAGLAERIATAAHAAGLLLLTCGMF--GNIIRFLPPL-TIGDEL  406 (420)
T ss_pred             eEEEEEEecCCC---------------------CCccHHHHHHHHHHHHHCCeEEeccCCC--CCEEEEECCC-CcCHHH
Confidence            455555432110                     0001234567888888889765443322  2589998642 246779


Q ss_pred             HHHHHHHHHHHHH
Q 037144          488 VRAAWTVVQEHLE  500 (502)
Q Consensus       488 i~~~~~~l~~~~~  500 (502)
                      |+++++.|.+++.
T Consensus       407 l~~~~~~l~~~l~  419 (420)
T TIGR00700       407 LSEGLDILCAILA  419 (420)
T ss_pred             HHHHHHHHHHHhh
Confidence            9999999988764

Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.

>PRK08360 4-aminobutyrate aminotransferase; Provisional

Probab=99.42  E-value=9.6e-10  Score=113.92  Aligned_cols=317  Identities=14%  Similarity=0.055  Sum_probs=173.1

Q ss_pred             HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144          116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV  195 (502)
Q Consensus       116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~  195 (502)
                      +.+.++.+.|.++++...+       ..+|+++||+|+..|+..||...    +    +..++-.....|-...-+....
T Consensus        84 ~~~~~la~~L~~~~p~~~~-------~v~f~~sGsEAve~AlklAr~~t----g----r~~ii~~~~~yHG~t~~a~s~~  148 (443)
T PRK08360         84 VEPLLLAEKLIEIAPGDNP-------KVSFGLSGSDANDGAIKFARAYT----K----RRKILSYLRSYYGSTYGAMSLT  148 (443)
T ss_pred             HHHHHHHHHHHHhCCCCCC-------EEEEcCCHHHHHHHHHHHHHHhc----C----CCeEEEEeCCcCCcCHHHHHhc
Confidence            3445667778887654322       58999999999999999998752    1    2223333334454333333333


Q ss_pred             CCC---------CCCEEEEecCCCCC--cc--------cCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----h
Q 037144          196 GID---------RKNIRAIKTTKSSS--YG--------LSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----L  252 (502)
Q Consensus       196 Glg---------~~~v~~v~~~~~~~--~~--------~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l  252 (502)
                      |..         ...+..+|......  +.        -+++.++++++... .+..+.+|++.-..+++|.+-|    +
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~iAAvi~eP~~~~~G~~~~~~~~l  227 (443)
T PRK08360        149 GLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEV-YAEGVAALFAEPIQGDAGMIVPPEDYF  227 (443)
T ss_pred             CCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhcc-CCCCeEEEEECCccCCCCCcCCCHHHH
Confidence            321         11344554431000  00        12345556664321 1234567777766678887755    8


Q ss_pred             hHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCccccc
Q 037144          253 KPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLK  332 (502)
Q Consensus       253 ~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~  332 (502)
                      ++|.++|++||+++++|.+|.++......+.....++ ..|.+++  .|.++..+..|+++.++. . .+.+... .+..
T Consensus       228 ~~l~~l~~~~g~llI~DEv~~g~gr~G~~~a~~~~~~-~pDiitl--sK~l~~G~pigav~~~~~-i-~~~~~~~-~~~~  301 (443)
T PRK08360        228 KKLKKILDEHGILLVVDEVQSGLGRTGKWFAIEHFGV-EPDIITL--GKPLGGGLPISATIGRAE-I-MDSLPPL-AHAF  301 (443)
T ss_pred             HHHHHHHHHcCCEEEEeccccCCCcCccchhhhhcCC-CCCEEEe--cccccCCceeEEEEEcHH-H-HhhhcCC-CCCC
Confidence            9999999999999999999987533221111111133 4577766  799986667888877533 2 2233211 0100


Q ss_pred             CccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEec--CCCeeE
Q 037144          333 NEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD-KRFEVAF--PRNFSL  409 (502)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~-~~~~l~~--~~~~~~  409 (502)
                                        +.. +.+.......++++.+..+   ++.++..++.++|++.|+++ ..+.++.  .....+
T Consensus       302 ------------------T~~-~~p~~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrg~Gl~  359 (443)
T PRK08360        302 ------------------TLS-GNPVASAAALAVIEEIEEK---NLLKRAEKLGNYTKKRLEEMKKKHELIGDVRGIGLM  359 (443)
T ss_pred             ------------------CCC-cCHHHHHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceE
Confidence                              110 1111223334445444332   35667777777777777653 1111221  122234


Q ss_pred             EEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHH
Q 037144          410 VCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVR  489 (502)
Q Consensus       410 v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~  489 (502)
                      +.+.+.......                  ..  .......+.+++.++|.++ .+.   +...+|++.. ...+++||+
T Consensus       360 ~gie~~~~~~~~------------------~~--~~~~~~~~~~~l~~~Gi~~-~~~---~~~~lr~~P~-l~~t~~~id  414 (443)
T PRK08360        360 IGVDLVKDRETK------------------ER--AYEEAAKVVWRAWELGLIV-TFF---SGNVLRIQPP-LTIEKEVLD  414 (443)
T ss_pred             EEEEEecCCccc------------------Cc--cHHHHHHHHHHHHHCCeEE-eec---CCCEEEEeCC-CCCCHHHHH
Confidence            444443211000                  00  0122456777888889643 321   2357999864 456778999


Q ss_pred             HHHHHHHHHHHh
Q 037144          490 AAWTVVQEHLEA  501 (502)
Q Consensus       490 ~~~~~l~~~~~~  501 (502)
                      ++++.+.++.++
T Consensus       415 ~~~~~l~~~l~~  426 (443)
T PRK08360        415 EGLDILEEAIED  426 (443)
T ss_pred             HHHHHHHHHHHH
Confidence            999999987653

>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=99.41  E-value=2.4e-10  Score=118.19  Aligned_cols=312  Identities=12%  Similarity=0.061  Sum_probs=168.5

Q ss_pred             HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144          116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV  195 (502)
Q Consensus       116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~  195 (502)
                      ..+.++.++|.+++.-.        ...+++.||++||..|+..++...    +    +..+|......|-...-+....
T Consensus        90 ~~~~~la~~L~~~~~~~--------~~v~~~~sGseA~e~Aik~a~~~~----g----~~~ii~~~~~yHG~t~~~~~~~  153 (426)
T PRK00062         90 ELEVELAELVIELVPSI--------EMVRMVNSGTEATMSAIRLARGYT----G----RDKIIKFEGCYHGHADSLLVKA  153 (426)
T ss_pred             HHHHHHHHHHHHhCCCC--------CEEEEecCHHHHHHHHHHHHHHHh----C----CCeEEEEcCccCCchhhhhhcc
Confidence            34456777777776311        157999999999999999998751    1    2334444554564432222221


Q ss_pred             CCC-----CC----CEE-----EEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHH
Q 037144          196 GID-----RK----NIR-----AIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCD  257 (502)
Q Consensus       196 Glg-----~~----~v~-----~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~  257 (502)
                      |-+     ..    ..+     .+...     .-|+++|++.+.+.   +..+.+|++.......|.+-|    +++|.+
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~~l~~~i~~~---~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~  225 (426)
T PRK00062        154 GSGAATLGLPDSPGVPEDFAKHTLTAP-----YNDLEAVEELFEEY---GDEIAAVIVEPVAGNMGVVPPKPGFLEGLRE  225 (426)
T ss_pred             CccccccCCCCCCCCCcccccceEEcC-----CCCHHHHHHHHHhC---CCcEEEEEEeCCcCCCCCcCCCHHHHHHHHH
Confidence            210     00    000     11111     13789999988642   223456777766667898887    999999


Q ss_pred             HHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCC-cccccCccC
Q 037144          258 VAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTN-PQYLKNEAT  336 (502)
Q Consensus       258 i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~-~~yl~~~~~  336 (502)
                      +|++||+++++|.+|.|+ ...........++ ..|.++  ..|.++..+..|+++.+ +.. .+.+... ..+....  
T Consensus       226 l~~~~~~llI~DEv~~G~-r~g~~~~~~~~~~-~pDi~~--~gK~l~~G~p~ga~~~~-~~i-~~~~~~~~~~~~~~T--  297 (426)
T PRK00062        226 LCDEHGALLIFDEVMTGF-RVALGGAQGYYGV-TPDLTT--LGKIIGGGLPVGAFGGR-REI-MEQLAPLGPVYQAGT--  297 (426)
T ss_pred             HHHHcCCEEEEeechhcc-ccCCccHHHHhCC-CcchHh--hhhHhhCCCcceeeeEH-HHH-HHhhccCCCceeccc--
Confidence            999999999999999765 3221111111122 356544  46998765667777654 332 2333211 1111110  


Q ss_pred             CCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEecCCCeeEEEE
Q 037144          337 DQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTS----DKRFEVAFPRNFSLVCF  412 (502)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~----~~~~~l~~~~~~~~v~f  412 (502)
                                     . ++.+....++.+++..+..+   +..++..++.+++++.|++    .+ +..-......++.+
T Consensus       298 ---------------~-~~~p~~~aaa~a~L~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~vrg~G~~~~i  357 (426)
T PRK00062        298 ---------------L-SGNPLAMAAGLATLKLLKEP---GFYEELEALTKRLAEGLKEAAKKAG-IPLTVNRVGSMFGL  357 (426)
T ss_pred             ---------------C-cCCHHHHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHHHHHHcC-CceEEEEecceEEE
Confidence                           0 11122233444455554332   3556666667777666653    33 33211233445555


Q ss_pred             EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHH
Q 037144          413 RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAW  492 (502)
Q Consensus       413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~  492 (502)
                      .+.+.....          .    .... .........+.+.+.++|.+ +.+..   ...+|++.   ..++++|++++
T Consensus       358 ~l~~~~~~~----------~----~~~~-~~~~~~~~~i~~~l~~~Gv~-v~~~~---~~~~~~~~---~~t~~ei~~~~  415 (426)
T PRK00062        358 FFTDEPVTN----------Y----ADAK-KSDTERFARFFHAMLDEGVY-LAPSQ---FEAGFVSA---AHTDEDIEKTL  415 (426)
T ss_pred             EEecCCCcc----------h----hhhc-cccHHHHHHHHHHHHHCCeE-eecCC---cCceeeec---cCCHHHHHHHH
Confidence            554321000          0    0000 00023345778888888864 43322   12456553   34777999999


Q ss_pred             HHHHHHHHh
Q 037144          493 TVVQEHLEA  501 (502)
Q Consensus       493 ~~l~~~~~~  501 (502)
                      +.++++.++
T Consensus       416 ~~l~~~l~~  424 (426)
T PRK00062        416 EAARKAFAA  424 (426)
T ss_pred             HHHHHHHHh
Confidence            999988765

>PRK05769 4-aminobutyrate aminotransferase; Provisional

Probab=99.41  E-value=1.3e-09  Score=112.96  Aligned_cols=315  Identities=10%  Similarity=0.040  Sum_probs=173.0

Q ss_pred             HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144          116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV  195 (502)
Q Consensus       116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~  195 (502)
                      +.+.++.+.|.+++.-+..      ...+|++|||+|+..|+..||...    +    +..+|......|-...-+..+.
T Consensus        97 ~~~~~lAe~L~~~~p~~~~------~~v~f~~SGsEA~e~AlklAr~~t----g----r~~Ii~~~~~yHG~t~~~ls~t  162 (441)
T PRK05769         97 EPAVELAERLVEIAPGGFE------KKVFFTNSGTESNEAAIKIARYHT----G----RKYIIAFLGAFHGRTYGSLSLT  162 (441)
T ss_pred             HHHHHHHHHHHHhCCCCCC------CEEEECCchHHHHHHHHHHHHHHh----C----CCeEEEECCCcCCccHHHHHhc
Confidence            4455677888887642111      157999999999999999999752    1    2223334444454433333332


Q ss_pred             CC----------CCCCEEEEecCCCCC--cc-cC--------HHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---
Q 037144          196 GI----------DRKNIRAIKTTKSSS--YG-LS--------AESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---  251 (502)
Q Consensus       196 Gl----------g~~~v~~v~~~~~~~--~~-~d--------~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---  251 (502)
                      |.          ....+..+|....-.  +. -|        ++.+++.+.+....+..+.+|++.......|.+-|   
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~  242 (441)
T PRK05769        163 ASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKN  242 (441)
T ss_pred             CCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHH
Confidence            21          012344555421000  00 11        23355533221111234667777766667788888   


Q ss_pred             -hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCccc
Q 037144          252 -LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQY  330 (502)
Q Consensus       252 -l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~y  330 (502)
                       +++|.++|++||+++++|.++.|+.....-+.....++ ..|.++++  |.++..++.|.++.++.- . ..+.   ..
T Consensus       243 ~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~a~~~~gv-~pDivt~~--K~l~~G~p~gav~~~~~i-~-~~~~---~~  314 (441)
T PRK05769        243 FFKELRKLADKYGILLIDDEVQTGMGRTGKMFAIEHFGV-EPDIITLA--KAIAGGLPLGAVIGRAEL-M-FLPP---GS  314 (441)
T ss_pred             HHHHHHHHHHHcCCEEEEechhhCCCcccceehhhccCC-CCCEEEEc--ccccCCcccEEEEEehhh-h-hcCC---CC
Confidence             99999999999999999999986432211111111133 46888764  888766778888776442 1 1111   00


Q ss_pred             ccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEecCC--Ce
Q 037144          331 LKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK-RFEVAFPR--NF  407 (502)
Q Consensus       331 l~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~-~~~l~~~~--~~  407 (502)
                      ..                 .+. .+.+.......++++.+..    +..++..++.++|++.|+++. .+.++...  ..
T Consensus       315 ~~-----------------~T~-~g~p~~~aaa~a~L~~l~~----~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G  372 (441)
T PRK05769        315 HA-----------------NTF-GGNPVAAAAALATLEELEE----GLLENAQKLGEYLRKELKELKEKYEFIGDVRGLG  372 (441)
T ss_pred             CC-----------------CCC-CcCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeecce
Confidence            00                 011 1111222333344444422    567778888888888886531 12222111  12


Q ss_pred             eEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHH
Q 037144          408 SLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESH  487 (502)
Q Consensus       408 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~d  487 (502)
                      .++.+.+.....                      +...+....+.+.+.++|.++ .+   .+...+|++.. ...+++|
T Consensus       373 ~~~~i~~~~~~~----------------------~~~~~~~~~~~~~~~~~Gil~-~~---~~~~~lr~~p~-l~~t~~~  425 (441)
T PRK05769        373 LMIGVELVKDRK----------------------EPDPKLRDKVLYEAFKRGLLL-LG---AGKSAIRIIPP-LIITEEE  425 (441)
T ss_pred             EEEEEEeccCCc----------------------cccHHHHHHHHHHHHhCCcEE-ec---CCCCEEEEeCC-CCCCHHH
Confidence            344444432100                      000234556777888889653 22   23467999874 4457779


Q ss_pred             HHHHHHHHHHHHHh
Q 037144          488 VRAAWTVVQEHLEA  501 (502)
Q Consensus       488 i~~~~~~l~~~~~~  501 (502)
                      ||+++++++++.++
T Consensus       426 id~~~~~l~~~l~~  439 (441)
T PRK05769        426 ADIGLEILEEAIKE  439 (441)
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999988764

>PRK12403 putative aminotransferase; Provisional

Probab=99.41  E-value=1.2e-09  Score=113.67  Aligned_cols=327  Identities=10%  Similarity=-0.001  Sum_probs=171.5

Q ss_pred             HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEe-CCCCchhHHHHHH
Q 037144          115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYS-SDQTHCAFQKAAQ  193 (502)
Q Consensus       115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~-s~~~H~s~~~aa~  193 (502)
                      .....++.+.|+++++-..+       ..+|+++||+||..|+..||...... +..  .+.+|+. ....|-+..-+..
T Consensus        97 ~~~~~~lae~L~~~~p~~~~-------~v~f~~SGseA~e~AiklAr~~~~~~-g~~--~r~~ii~~~~~yHG~t~~~~s  166 (460)
T PRK12403         97 HPAVIELSELLFSLLPGHYS-------HAIYTNSGSEANEVLIRTVRRYWQVL-GKP--QKKIMIGRWNGYHGSTLAATA  166 (460)
T ss_pred             CHHHHHHHHHHHHhCCCCcC-------EEEEeCCcHHHHHHHHHHHHHHHHhh-CCC--CCcEEEEECCCcCcccHhhhh
Confidence            34455566778887753212       47999999999999999998753221 110  2333333 3334766555555


Q ss_pred             HcCCC--------CCCEEEEecCCC--CCccc--------CHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----
Q 037144          194 IVGID--------RKNIRAIKTTKS--SSYGL--------SAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----  251 (502)
Q Consensus       194 ~~Glg--------~~~v~~v~~~~~--~~~~~--------d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----  251 (502)
                      +.|..        ...+..+|....  .++.+        +.++|++.+.+..  ...+.+|++.......|.+-|    
T Consensus       167 ~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~~--~~~iaavI~Epv~g~gG~~~~~~~y  244 (460)
T PRK12403        167 LGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILELG--AENVAGFVAEPFQGAGGMIFPPESY  244 (460)
T ss_pred             cCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHhC--CCceEEEEEccccCCCCCccCCHHH
Confidence            44431        012344442110  00011        1355666654321  123556777666666788877    


Q ss_pred             hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-cceEEEeeCchhhhhhhcCC-cc
Q 037144          252 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-DCCCLWVKDPSCLLSTLSTN-PQ  329 (502)
Q Consensus       252 l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~-~~  329 (502)
                      +++|.++|++||+.+++|.+++|+.-...-+..-..++ ..|.+++  .|.++..+ ..|.+++++. . .+.+... ..
T Consensus       245 l~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~e~~gv-~PDiv~~--gK~lggG~~Piga~v~~~~-i-~~~~~~~~~~  319 (460)
T PRK12403        245 WPEIQRICRQYDVLLCADEVIGGFGRTGEWFAHEHFGF-EPDTLSI--AKGLTSGYVPMGGLVLSKR-I-AEALVEQGGV  319 (460)
T ss_pred             HHHHHHHHHHcCCEEEEeccccCCCcCchhhhhhhcCC-CCCeEEE--cccccccccceEEEEECHH-H-HHHHhcCCCc
Confidence            99999999999999999999977633322111111244 3688885  59987664 6777777533 2 2333211 11


Q ss_pred             cccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHH-HHHHHHHHHHhcC-CCeEEecC--C
Q 037144          330 YLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHV-GMAKLFERLVTSD-KRFEVAFP--R  405 (502)
Q Consensus       330 yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~-~la~~l~~~l~~~-~~~~l~~~--~  405 (502)
                      |+...                |. .+.+..+.+..++|+.+-.+.   +.++.. ++.++|++.|+++ ....++..  -
T Consensus       320 ~~~~~----------------T~-~gnPl~~Aaala~L~~i~~~~---l~~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG  379 (460)
T PRK12403        320 FAHGL----------------TY-SGHPVAAAVAIANLKALRDEG---VVTRVKDDTGPYLQRCLREVFGDHPLVGEVQG  379 (460)
T ss_pred             cccCC----------------CC-CCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHHhcCCCEEeEee
Confidence            21110                00 111222233344555543333   445553 5666666666532 11222211  1


Q ss_pred             CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcH
Q 037144          406 NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTME  485 (502)
Q Consensus       406 ~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~  485 (502)
                      ...++.+.+.......                 ............+.+.+.++|.+....    + ..+|++.. ...++
T Consensus       380 ~Gl~~gie~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~Gll~~~~----~-~~~~l~Pp-l~it~  436 (460)
T PRK12403        380 AGLVAALQFAEDKATR-----------------KRFANENDLAWRCRTIGFEEGVIIRST----L-GRMIMAPA-LVAGR  436 (460)
T ss_pred             cceEEEEEEccCcccc-----------------ccccchhHHHHHHHHHHHhCCEEEEec----C-CEEEEECC-CCCCH
Confidence            1234444443211000                 000000122345667778889654321    1 24777653 44678


Q ss_pred             HHHHHHHHHHHHHHHh
Q 037144          486 SHVRAAWTVVQEHLEA  501 (502)
Q Consensus       486 ~di~~~~~~l~~~~~~  501 (502)
                      +||+++++.+.++.++
T Consensus       437 ~eid~~~~~l~~al~~  452 (460)
T PRK12403        437 AEIDELVDKTRIAVDR  452 (460)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            8999999999887654

>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase

Probab=99.40  E-value=4.9e-10  Score=116.50  Aligned_cols=312  Identities=11%  Similarity=0.026  Sum_probs=169.4

Q ss_pred             HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEE-eCCCCchhHHHHHH
Q 037144          115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVY-SSDQTHCAFQKAAQ  193 (502)
Q Consensus       115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~-~s~~~H~s~~~aa~  193 (502)
                      .+.+.++.+.|++.+..- +       ...|+++||||+..|+..||...         ++..|+ .....|-...-...
T Consensus       138 ~~~~~~lAe~l~~~~p~~-~-------~v~f~~SGsEA~e~AlklAR~~t---------gr~~Ii~~~g~YHG~~~~~~~  200 (474)
T PLN02482        138 CLLENVLAEMVIDAVPSV-E-------MVRFVNSGTEACMGVLRLARAYT---------GREKIIKFEGCYHGHADSFLV  200 (474)
T ss_pred             CHHHHHHHHHHHHhCCCC-C-------EEEEeCChHHHHHHHHHHHHHhc---------CCCEEEEECCccCCCcchhhh
Confidence            456667788888886421 1       58999999999999999998752         233333 34334532211111


Q ss_pred             Hc--CC-----------CC---CCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hh
Q 037144          194 IV--GI-----------DR---KNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LK  253 (502)
Q Consensus       194 ~~--Gl-----------g~---~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~  253 (502)
                      ..  |.           ..   ..+..+|.       -|+++|++.+.+.   +..+.+|++.......|.+-|    ++
T Consensus       201 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------nd~~~l~~~l~~~---~~~iAavI~Epv~g~~G~i~p~~~fl~  270 (474)
T PLN02482        201 KAGSGVATLGLPDSPGVPKAATSATLTAPY-------NDLEAVKKLFEAN---KGEIAAVILEPVVGNSGFIVPKKEFLE  270 (474)
T ss_pred             hcCCCccccCCCCCCCCCCCCCCCeEEecC-------CChHHHHHHHHhC---CCceEEEEECCCCCCCCCcCCCHHHHH
Confidence            10  11           00   01122221       2789999988642   233557777766667787766    55


Q ss_pred             HHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCC-ccccc
Q 037144          254 PLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTN-PQYLK  332 (502)
Q Consensus       254 eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~-~~yl~  332 (502)
                      +|.++|++||+.+++|.++.|+ ..........-++ ..|.+++  .|.++..+..|.+..++. . .+.+... +.+..
T Consensus       271 ~lr~lc~~~g~lLI~DEV~tGf-R~g~~ga~~~~gv-~PDi~t~--gK~lggG~Pigav~g~~e-i-~~~~~~~~~~~~~  344 (474)
T PLN02482        271 GLREITKENGALLVFDEVMTGF-RIAYGGAQEYFGI-TPDLTTL--GKVIGGGLPVGAYGGRRE-I-MEMVAPAGPMYQA  344 (474)
T ss_pred             HHHHHHHHcCCEEEEeccccCe-ecCcchHhHHhCC-CCCEEEe--cchhhCCCceEEEEEcHH-H-HHhhccCCCcccc
Confidence            8999999999999999999665 3222111112234 5788776  599987677888876533 2 2333211 11111


Q ss_pred             CccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEecCCCeeE
Q 037144          333 NEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK---RFEVAFPRNFSL  409 (502)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~---~~~l~~~~~~~~  409 (502)
                      .                 |+. +.+....+..++|+.+..   .+..++..++.++|+++|+++-   ++.+......++
T Consensus       345 ~-----------------T~~-gnpl~~aAala~L~~l~~---~~~~~~~~~~g~~l~~~L~~l~~~~g~~~~~~~v~g~  403 (474)
T PLN02482        345 G-----------------TLS-GNPLAMTAGIHTLKRLQQ---PGTYEYLDKITKKLIQGILEAGKKAGHEMCGGYISGM  403 (474)
T ss_pred             c-----------------Ccc-hhHHHHHHHHHHHHHHhc---cCHHHHHHHHHHHHHHHHHHHHHhcCCCEEEcccceE
Confidence            1                 100 111122233445555433   2466777778888888886541   122221111234


Q ss_pred             EEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHH
Q 037144          410 VCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVR  489 (502)
Q Consensus       410 v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~  489 (502)
                      +.+.+.......              .......+ .+....+...+.++|.++ .+.... .   ++ + +...+++|||
T Consensus       404 ~gi~f~~~~~~~--------------~~~~~~~d-~~~~~~~~~~l~~~Gv~~-~~~~~~-~---~~-p-sl~ht~~dId  461 (474)
T PLN02482        404 FGFFFTEGPVYN--------------FADAKKSD-TAKFARFHRGMLEEGVYL-APSQFE-A---GF-T-SLAHTEEDID  461 (474)
T ss_pred             EEEEEecCCccC--------------hhhhccCC-HHHHHHHHHHHHHCCeEE-eccCCC-C---Cc-C-CCCCCHHHHH
Confidence            444443211000              00000000 223456777888888643 332111 1   11 2 3334678999


Q ss_pred             HHHHHHHHHHHhC
Q 037144          490 AAWTVVQEHLEAF  502 (502)
Q Consensus       490 ~~~~~l~~~~~~~  502 (502)
                      ++++++.++.+++
T Consensus       462 ~~l~al~~~l~~~  474 (474)
T PLN02482        462 FTIAAAERVLARI  474 (474)
T ss_pred             HHHHHHHHHHHhC
Confidence            9999999987653

>PLN00144 acetylornithine transaminase

Probab=99.40  E-value=7.8e-10  Score=112.65  Aligned_cols=302  Identities=14%  Similarity=0.048  Sum_probs=163.7

Q ss_pred             HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccC----C-CCeEEEeCCCCchhHHH
Q 037144          116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGREN----I-SKLVVYSSDQTHCAFQK  190 (502)
Q Consensus       116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~----~-~~~~v~~s~~~H~s~~~  190 (502)
                      +.+.++.+.|.++.+.+         ..+|+++||+|+..|+..||....++....+    . +..+|......|-...-
T Consensus        57 ~~~~~la~~l~~~~~~~---------~v~f~~sGseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~  127 (382)
T PLN00144         57 IPQVELAKRLVASSFAD---------RVFFCNSGTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLG  127 (382)
T ss_pred             HHHHHHHHHHHhcCCCC---------eEEEeCCcHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHH
Confidence            34455667777765432         4799999999999999999875322110000    0 12244445445544333


Q ss_pred             HHHHcCCC---------CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc--CC--hhHHHH
Q 037144          191 AAQIVGID---------RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV--DP--LKPLCD  257 (502)
Q Consensus       191 aa~~~Glg---------~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i--dp--l~eI~~  257 (502)
                      +....+-.         ...+..+|.       -|+++|++.+..     ..+.+|++.-..++.|.+  ++  +++|.+
T Consensus       128 ~~s~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~~~~-----~~~aavi~eP~q~~gg~~~~~~~~~~~l~~  195 (382)
T PLN00144        128 ALALTSKEQYRTPFEPLMPGVTFVEY-------GNLEAARKLIQK-----GKTAAVFVEPVQGEGGIYPATKEFLQGLRA  195 (382)
T ss_pred             HHhcCCCccccccCCCCCCCeEEeCC-------CCHHHHHHhcCC-----CCeEEEEEccccCCCCCccCCHHHHHHHHH
Confidence            33332221         112233332       178999988742     234456665445553443  44  899999


Q ss_pred             HHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCC
Q 037144          258 VAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATD  337 (502)
Q Consensus       258 i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~  337 (502)
                      +|++||+++++|.++.++......+.....++ ..|.+++  .|.++..+..|+++.++. . .+.+...  ....    
T Consensus       196 l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~-~PDi~t~--sK~l~~G~pig~v~~~~~-~-~~~~~~~--~~~~----  264 (382)
T PLN00144        196 LCDEAGALLVFDEVQCGLGRTGYLWAHEAYGV-EPDIMTL--AKPLAGGLPIGAVLVTEK-V-ASAINPG--DHGS----  264 (382)
T ss_pred             HHHHcCCEEEEechhhCCCccchHhhhhhcCC-CCCEEEe--cccccCCcceEEEEEcHH-H-HhccCCC--CCCC----
Confidence            99999999999999987543221111112233 4675554  699987777888887533 2 2222110  0000    


Q ss_pred             CCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHH----hcCCCeEEecCCCeeEEEEE
Q 037144          338 QEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLV----TSDKRFEVAFPRNFSLVCFR  413 (502)
Q Consensus       338 ~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l----~~~~~~~l~~~~~~~~v~f~  413 (502)
                                   +. .+.+..+..+.++++.+-...   ..++..++.++|++.|    .+.|.+.-+.. ...++.+.
T Consensus       265 -------------T~-~~~pl~~aaa~a~l~~i~~~~---~~~~~~~~g~~l~~~l~~~~~~~~~~~~vrg-~G~~~~l~  326 (382)
T PLN00144        265 -------------TF-AGGPLVCNAALAVLDKISKPG---FLASVAKKGEYLRELLRRKLGGNPHVKEVRG-VGLLVGIQ  326 (382)
T ss_pred             -------------CC-CCCHHHHHHHHHHHHHHhhch---HHHHHHHHHHHHHHHHHHHHhhCCCceeeec-CceEEEEE
Confidence                         11 111112233344445553333   3444445555555544    34443211211 22334444


Q ss_pred             eecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHH
Q 037144          414 VTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWT  493 (502)
Q Consensus       414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~  493 (502)
                      +...                              ...+.+.+.++|..+.+.   ....++|++... ..++++|+.+++
T Consensus       327 l~~~------------------------------~~~~~~~~~~~Gv~i~~~---~~~~~lrl~p~~-~~~~~~i~~~~~  372 (382)
T PLN00144        327 LDVP------------------------------AGPLVDACRDSGLLVLTA---GKGDVVRLVPPL-VISEAELEQAVE  372 (382)
T ss_pred             ecCc------------------------------cHHHHHHHHHCCeEEeec---CCCCEEEEeCCC-ccCHHHHHHHHH
Confidence            4111                              135677777889754333   113689999854 345779999999


Q ss_pred             HHHHHHHh
Q 037144          494 VVQEHLEA  501 (502)
Q Consensus       494 ~l~~~~~~  501 (502)
                      .|.+++.+
T Consensus       373 ~l~~~l~~  380 (382)
T PLN00144        373 ILADCLPA  380 (382)
T ss_pred             HHHHHHHh
Confidence            99998765

>PRK09221 beta alanine--pyruvate transaminase; Provisional

Probab=99.40  E-value=1.1e-09  Score=113.67  Aligned_cols=324  Identities=13%  Similarity=0.131  Sum_probs=172.2

Q ss_pred             HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcC
Q 037144          117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVG  196 (502)
Q Consensus       117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~G  196 (502)
                      ...++.+.|.+++.-+.+       ..+|++|||+|+..|++.||.....+ +..+ +.-+|......|-...-+....|
T Consensus        93 ~~~~la~~L~~~~p~~~~-------~v~f~~sGseAve~AlklAr~~~~~~-g~~~-r~~ii~~~~~yHG~t~gals~~~  163 (445)
T PRK09221         93 LAFELAERLAELAPGGLD-------HVFFTNSGSESVDTALKIALAYHRAR-GQGT-RTRLIGRERGYHGVGFGGISVGG  163 (445)
T ss_pred             HHHHHHHHHHHhCCCCCC-------EEEEeCCcHHHHHHHHHHHHHHHHhc-CCCC-CcEEEEECCCcCccchhhhccCC
Confidence            344566777777632211       57999999999999999998753221 1111 22344445445543222222222


Q ss_pred             C-------C--CCCEEEEecCC-CCC--cc--------cCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----h
Q 037144          197 I-------D--RKNIRAIKTTK-SSS--YG--------LSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----L  252 (502)
Q Consensus       197 l-------g--~~~v~~v~~~~-~~~--~~--------~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l  252 (502)
                      .       +  ...+..+|... ...  +.        -..++|++.++..  ....+.+|++.......|.+-|    +
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~--~~~~iAavi~Epv~g~~G~~~~~~~yl  241 (445)
T PRK09221        164 IVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELADDLERLVALH--DASTIAAVIVEPMAGSAGVLVPPKGYL  241 (445)
T ss_pred             ChhhhhccCCCCCCCeEeCCCccccccccCCChHHHHHHHHHHHHHHHHhc--CCCcEEEEEEecccCCCCcccCCHHHH
Confidence            1       0  01233444321 000  00        1135677766532  1134567777777777899888    9


Q ss_pred             hHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCcccc
Q 037144          253 KPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQYL  331 (502)
Q Consensus       253 ~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl  331 (502)
                      ++|.++|++||+++++|.++.|+......+.....++ ..|.++++  |.++.. +..|.++.++. . .+.+...+.+.
T Consensus       242 ~~l~~lc~~~g~llI~DEV~tG~GRtG~~~~~~~~gv-~PDi~~~g--K~l~gG~~Pi~av~~~~~-i-~~~~~~~~~~~  316 (445)
T PRK09221        242 QRLREICDKHGILLIFDEVITGFGRLGAAFAAERFGV-TPDIITFA--KGLTNGAIPMGAVIASDE-I-YDAFMQGPEYA  316 (445)
T ss_pred             HHHHHHHHHcCCEEEEeehhhCCCcCchhhHHHhcCC-CCCEEEec--cccccCcccceeeEEcHH-H-HHhhccCcccc
Confidence            9999999999999999999866432211111111233 46877765  877543 23666666543 2 23332211111


Q ss_pred             cCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-Cee-E
Q 037144          332 KNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR-NFS-L  409 (502)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~-~~~-~  409 (502)
                      ...            ....|+. +.+.......++++.+-.+   .++++..++.++|++.|+++.++..+... ..+ +
T Consensus       317 ~~~------------~~~~T~~-~~pl~~aaa~a~L~~i~~~---~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrg~Gl~  380 (445)
T PRK09221        317 IEF------------FHGYTYS-AHPVACAAGLATLDIYREE---DLFERAAELAPYFEDAVHSLKGLPHVIDIRNIGLV  380 (445)
T ss_pred             ccc------------ccccCCC-cCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHhhccCCCEEEEecCceE
Confidence            000            0001111 1121222333445544333   45778888999999998876332222111 112 2


Q ss_pred             EEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHH
Q 037144          410 VCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVR  489 (502)
Q Consensus       410 v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~  489 (502)
                      ..+.+.+...                   .+    .....++.+.+.++|.+. ..   .+ ..+|++.. ...+++||+
T Consensus       381 ~~v~~~~~~~-------------------~~----~~~~~~~~~~~~~~Gv~~-~~---~~-~~lr~~Pp-l~~t~~eid  431 (445)
T PRK09221        381 AGIELAPRPG-------------------AP----GARGYEAFMKCFEKGLLV-RY---TG-DTIALSPP-LIIEKAQID  431 (445)
T ss_pred             EEEEEecccc-------------------cc----cchHHHHHHHHHHCCeEE-ee---cC-CEEEEECC-ccCCHHHHH
Confidence            2333322100                   00    111346677788889643 22   12 47999864 456778999


Q ss_pred             HHHHHHHHHHHh
Q 037144          490 AAWTVVQEHLEA  501 (502)
Q Consensus       490 ~~~~~l~~~~~~  501 (502)
                      ++++.|++++++
T Consensus       432 ~~~~~l~~~l~~  443 (445)
T PRK09221        432 ELVDALGDALRA  443 (445)
T ss_pred             HHHHHHHHHHHh
Confidence            999999988765

>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]

Probab=99.39  E-value=6.5e-11  Score=119.91  Aligned_cols=327  Identities=13%  Similarity=0.112  Sum_probs=201.7

Q ss_pred             hhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHH
Q 037144          112 PAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKA  191 (502)
Q Consensus       112 p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a  191 (502)
                      .+..++-.++.+||+++.|++.-        .+=..+|..+-..++.+.|.....+ |..  .+-+.+++..+|-.....
T Consensus       578 qGY~~lf~~Le~~Lc~iTG~D~~--------s~QPNsGA~GEYaGL~~IRaY~~~k-ge~--hRnvClIPvSAHGTNPAS  646 (1001)
T KOG2040|consen  578 QGYQQLFTELEKDLCEITGFDSF--------SLQPNSGAQGEYAGLRVIRAYLESK-GEG--HRNVCLIPVSAHGTNPAS  646 (1001)
T ss_pred             hhHHHHHHHHHHHhheeecccce--------eecCCCCcccchhhHHHHHHHHHhc-cCC--cceeEEEeecccCCChhh
Confidence            35567777888999999999742        1223355566667777776654332 221  456778888899999999


Q ss_pred             HHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc-CChhHHHHHHHHhCCEEEeec
Q 037144          192 AQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV-DPLKPLCDVAKQFGIWVHVDA  270 (502)
Q Consensus       192 a~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i-dpl~eI~~i~~~~g~~lhVDa  270 (502)
                      |.+.|+   +|+.|.++.  +|.+|..+|+++.++...+   -.++.+|.++| .|.+ ..|+++.++.++||--+..||
T Consensus       647 A~Magm---kvvpV~~~~--~G~id~~dLk~kaekh~~~---Laa~MvTYPST-~GvfE~~i~d~cd~iHehGGQVYlDG  717 (1001)
T KOG2040|consen  647 AAMAGM---KVVPVGCDA--NGNIDMVDLKAKAEKHKDN---LAALMVTYPST-HGVFEEGIDDICDIIHEHGGQVYLDG  717 (1001)
T ss_pred             HHhcCC---EEEEeeccC--CCCccHHHHHHHHHHhhhh---hheeEEecccc-cccccccHHHHHHHHHhcCCEEEecC
Confidence            999999   999998875  5799999999988765432   34778888875 4677 469999999999999999999


Q ss_pred             ccccc-cccCccchhhhcCCCCCCeeEEccCCcCCCCCcceE-----EEeeCchhhhhhhcCCcccccCccCCCCCcccc
Q 037144          271 AYAGS-ACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCC-----LWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQE  344 (502)
Q Consensus       271 A~g~~-~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~-----~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~  344 (502)
                      |.=-. +-+|.. .+     -++|+.-++.||+|..|.|.|.     +.+|..         .++||.......  ..+.
T Consensus       718 ANMNAqVGlc~p-Gd-----~GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK~H---------LapfLP~HpVvs--~~~~  780 (1001)
T KOG2040|consen  718 ANMNAQVGLCRP-GD-----IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH---------LAPFLPSHPVVS--PGRP  780 (1001)
T ss_pred             CCccceecccCC-cc-----ccccceeecccceeeecCCCCCCCCCccchhhh---------ccccCCCCCccC--CCCC
Confidence            75221 112211 11     1899999999999988865544     444321         233443211100  0000


Q ss_pred             cCCCcccccCCCCCC---ch-HHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEE--EEeecCc
Q 037144          345 VGYKDWQITLCRRFR---SL-KLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVC--FRVTPSA  418 (502)
Q Consensus       345 ~~~~~~~~~~sr~~~---al-~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~--f~~~~~~  418 (502)
                      -+....+--.+-+++   .+ --|+.++.+|..|+...-+-.+-+|+|+.++|+..  ++++....-+.|.  |.+.-..
T Consensus       781 ~~~~~~gsVsaaP~Gsa~ILpISwaYikmMG~~GL~~as~~AiLNaNYMakRLe~h--Ykil~~~~~~~vaHEFIlD~r~  858 (1001)
T KOG2040|consen  781 EDTSPVGSVSAAPWGSALILPISWAYIKMMGSGGLKDASKIAILNANYMAKRLESH--YKILFRGENGLVAHEFILDLRP  858 (1001)
T ss_pred             CCCCCccceeccCCCcceeehhHHHHHHHhcccccchhhHHHhhhhHHHHHHHhhc--cceeEecCCcceeeeeeeechh
Confidence            000001111122222   23 34899999999999999888999999999999875  6665433333443  2221110


Q ss_pred             chhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEee-eECCEEEEEEEecCCCCcHHHHHHHHHHHHH
Q 037144          419 VMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHA-IVGGIYVLRFAAGNSMTMESHVRAAWTVVQE  497 (502)
Q Consensus       419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~  497 (502)
                               ++...            +--...+.++|..-|.-  .++ .|.-.+.|=+-.+.. .+.+++|++++++-.
T Consensus       859 ---------fK~~a------------gieavDvAKRL~DYgFH--aPTmswPV~gtLMIEPTES-E~k~ElDRfcdAliS  914 (1001)
T KOG2040|consen  859 ---------FKKTA------------GIEAVDVAKRLMDYGFH--APTMSWPVAGTLMIEPTES-EDKAELDRFCDALIS  914 (1001)
T ss_pred             ---------hcccc------------CCcHHHHHHHHHhccCC--CCccccccCCceEeccCcc-ccHHHHHHHHHHHHH
Confidence                     00000            00023455666666752  222 232233344433322 345789999999877


Q ss_pred             HHHh
Q 037144          498 HLEA  501 (502)
Q Consensus       498 ~~~~  501 (502)
                      +.++
T Consensus       915 IreE  918 (1001)
T KOG2040|consen  915 IREE  918 (1001)
T ss_pred             HHHH
Confidence            6553

>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=99.39  E-value=8.7e-10  Score=114.01  Aligned_cols=310  Identities=11%  Similarity=0.043  Sum_probs=171.4

Q ss_pred             HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144          116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV  195 (502)
Q Consensus       116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~  195 (502)
                      +.+.++.+.|.+++.- .       ....|+++||+|+..|+..||...    +    +..+|......|-...-+....
T Consensus        93 ~~~~~la~~l~~~~p~-~-------~~v~f~~sGseA~e~AlklAr~~t----g----r~~ii~~~~~yHG~t~~~~~~~  156 (428)
T PRK12389         93 ELEIEFAKMLKEAIPS-L-------EKVRFVNSGTEAVMTTIRVARAYT----G----RTKIIKFAGCYHGHSDLVLVAA  156 (428)
T ss_pred             HHHHHHHHHHHHhCCC-C-------cEEEEeCCHHHHHHHHHHHHHHhh----C----CCEEEEECCCcCCChHHHHHhc
Confidence            3455677777777641 1       157999999999999999999752    1    2234444444564433333333


Q ss_pred             CCCC----------------CCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHH
Q 037144          196 GIDR----------------KNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPL  255 (502)
Q Consensus       196 Glg~----------------~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI  255 (502)
                      |-+.                ..+..+|.       -|++.|++.+++..   ..+.+|++.......|.+.|    +++|
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~~---~~vaavi~EPv~g~~G~~~p~~~yl~~l  226 (428)
T PRK12389        157 GSGPSTLGTPDSAGVPKSIAQEVITVPF-------NDIEALKEALDKWG---DEVAAVLVEPIVGNFGIVEPKPGFLEAV  226 (428)
T ss_pred             CCcccccCCCCCCCCCCcccCceEEcCC-------CCHHHHHHHHHhcC---CcEEEEEEeCCCCCCCCcCCCHHHHHHH
Confidence            2100                11222221       17899999886432   23557777766667788888    9999


Q ss_pred             HHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcC-CcccccCc
Q 037144          256 CDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLST-NPQYLKNE  334 (502)
Q Consensus       256 ~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~  334 (502)
                      .++|++||+.+++|.++.|+ -....+.....++ ..|.+++  -|.++..+..|.++.++. . .+.+.. .+.+....
T Consensus       227 ~~lc~~~g~llI~DEV~tG~-Rt~~~~a~~~~gv-~PDivt~--gK~lggG~Pi~av~~~~~-i-~~~~~~~~~~~~~~T  300 (428)
T PRK12389        227 NELAHEAGALVIYDEVITAF-RFMYGGAQDLLGV-EPDLTAL--GKIIGGGLPIGAYGGRKD-I-MEQVAPLGPAYQAGT  300 (428)
T ss_pred             HHHHHHcCCEEEEEcccccc-ccCcchhhHHhCC-CCCeeee--chhhcCCCceeEEeEHHH-H-HhhhccCCCcccccC
Confidence            99999999999999999876 2211111111234 5788776  498876677888876533 2 233321 11111110


Q ss_pred             cCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCC-eEEecCCCeeE
Q 037144          335 ATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTS----DKR-FEVAFPRNFSL  409 (502)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~----~~~-~~l~~~~~~~~  409 (502)
                                       . .+.+..+.+..++++.+..+   ++.++..++.++|++.|++    .|. .++..-  .++
T Consensus       301 -----------------~-~gnpl~~Aaala~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~r~--~g~  357 (428)
T PRK12389        301 -----------------M-AGNPASMAAGIACLEVLQQE---GVYEKLDRLGAMLEEGILEAAEKHGITITINRL--KGA  357 (428)
T ss_pred             -----------------C-ccCHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEec--CcE
Confidence                             0 11112223334455554333   3667777888888888865    331 122111  123


Q ss_pred             EEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHH
Q 037144          410 VCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVR  489 (502)
Q Consensus       410 v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~  489 (502)
                      +.+.+.......              . .............+.+.+.++|.++ .+.   +...+.++   ...+++||+
T Consensus       358 ~gi~~~~~~~~~--------------~-~~~~~~~~~~~~~~~~~l~~~Gv~~-~~~---~~~~~~~~---l~~t~e~id  415 (428)
T PRK12389        358 LTVYFTDEKVTN--------------Y-DQAERSDGEAFGKFFKLMLNQGINL-APS---KYEAWFLT---TAHTEEDIE  415 (428)
T ss_pred             EEEEEeCCCCCC--------------h-hhhcccCHHHHHHHHHHHHHCCcEe-ecC---CCCCeeec---CCCCHHHHH
Confidence            333332211000              0 0000000223457778888888644 332   11123333   335778999


Q ss_pred             HHHHHHHHHHHhC
Q 037144          490 AAWTVVQEHLEAF  502 (502)
Q Consensus       490 ~~~~~l~~~~~~~  502 (502)
                      +++++++++.+++
T Consensus       416 ~~~~~l~~~l~~~  428 (428)
T PRK12389        416 ETLEAVDRAFAQL  428 (428)
T ss_pred             HHHHHHHHHHHhC
Confidence            9999999987653

>PRK06062 hypothetical protein; Provisional

Probab=99.38  E-value=1.3e-09  Score=113.08  Aligned_cols=323  Identities=10%  Similarity=0.020  Sum_probs=171.9

Q ss_pred             HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH
Q 037144          115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI  194 (502)
Q Consensus       115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~  194 (502)
                      .+...++.+.|.++..-+-       ...+|+++||+|+..|++.||...    +    +..+|......|-...-+...
T Consensus        94 ~~~~~~lae~L~~~~p~~~-------~~v~f~~SGsEAve~AlklAr~~t----g----r~~ii~~~~~yHG~t~~als~  158 (451)
T PRK06062         94 NDARSEAARLIAERAPGDL-------SKVFFTNGGADANEHAVRMARLHT----G----RPKVLSAYRSYHGGTGSAINL  158 (451)
T ss_pred             CHHHHHHHHHHHHhCCCCC-------CEEEEcCChHHHHHHHHHHHHHhh----C----CceEEEEeCCCCCCCHHHHhh
Confidence            3444556677777763211       158999999999999999998752    1    223344444445443333333


Q ss_pred             cCCC--------CCCEEEEecCCCCC--c--ccC-------HHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----
Q 037144          195 VGID--------RKNIRAIKTTKSSS--Y--GLS-------AESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----  251 (502)
Q Consensus       195 ~Glg--------~~~v~~v~~~~~~~--~--~~d-------~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----  251 (502)
                      .|..        ...+..++......  +  .-|       +++|+++|+..  .+..+.+|++.......|.+-|    
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~iAaviiEPv~g~gG~~~p~~~y  236 (451)
T PRK06062        159 TGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIELE--GPSTIAAILLESVPGTAGILVPPPGY  236 (451)
T ss_pred             cCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHhc--CCCceEEEEEccccCCCCcccCCHHH
Confidence            3210        01223333221000  0  012       67778877531  1234567777666666788888    


Q ss_pred             hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-cceEEEeeCchhhhhhhcCCccc
Q 037144          252 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-DCCCLWVKDPSCLLSTLSTNPQY  330 (502)
Q Consensus       252 l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~~~y  330 (502)
                      +++|.++|++||+.+++|.++.|+.....-+.....++ ..|.+++  -|.++..+ +.|.++.++. . .+.+... .+
T Consensus       237 l~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~~~~gv-~PDi~t~--gK~lggG~~Pigav~~~~~-i-~~~~~~~-~~  310 (451)
T PRK06062        237 LAGVRELCDRHGIVLIADEVMAGFGRTGKWFAIEHFGV-VPDLITF--AKGVNSGYVPLGGVAISEA-I-AATFADR-PY  310 (451)
T ss_pred             HHHHHHHHHHcCCEEEeeccccCCCcCcHHHHHHhcCC-CCCeeee--chhhhcCCcCcEEEEEcHH-H-HHHhccC-CC
Confidence            99999999999999999999987533222111112244 5788876  49987654 5788877653 3 3344211 11


Q ss_pred             ccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHH-HHHHHHHhc----CCCeEEecCC
Q 037144          331 LKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMA-KLFERLVTS----DKRFEVAFPR  405 (502)
Q Consensus       331 l~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la-~~l~~~l~~----~~~~~l~~~~  405 (502)
                      ...                .|+. +.+..+....++|+.+-.+.   ++++..++. ++|++.|++    .|.+.-+. -
T Consensus       311 ~~~----------------~T~~-gnpl~~Aaa~a~L~~l~~~~---l~~~~~~~G~~~l~~~L~~l~~~~~~v~~vr-G  369 (451)
T PRK06062        311 PGG----------------LTYS-GHPLACAAAVATINAMEEEG---IVENAARIGAEVLGPGLRELAERHPSVGEVR-G  369 (451)
T ss_pred             CCC----------------CCCC-CCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHhcCCcEEeEe-c
Confidence            110                0111 11222233344555443333   455555554 456555544    33211111 1


Q ss_pred             CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcH
Q 037144          406 NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTME  485 (502)
Q Consensus       406 ~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~  485 (502)
                      ...++.+.+......         .++.   .. .... ......+.+.+.++|.+. .+   . ...+|++.. ...++
T Consensus       370 ~Gl~~gve~~~~~~~---------~~~~---~~-~~~~-~~~~~~~~~~l~~~Gvl~-~~---~-~~~lrl~pp-l~~t~  429 (451)
T PRK06062        370 LGVFWALELVADRET---------REPL---AP-YGAS-SAAMAAVKAACKERGLLP-FV---N-GNRIHVVPP-CTVTE  429 (451)
T ss_pred             cccEEEEEEcccccc---------cCCC---cc-cchh-hHHHHHHHHHHHHCCcEE-ee---c-CCEEEEECC-ccCCH
Confidence            122344444321000         0000   00 0000 223567888888889753 22   1 236898763 34577


Q ss_pred             HHHHHHHHHHHHHHHh
Q 037144          486 SHVRAAWTVVQEHLEA  501 (502)
Q Consensus       486 ~di~~~~~~l~~~~~~  501 (502)
                      +|||++++.+.+++++
T Consensus       430 ~eid~~~~~l~~~l~~  445 (451)
T PRK06062        430 DEVREGLAILDAALAV  445 (451)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            8999999999988764

>PRK13360 omega amino acid--pyruvate transaminase; Provisional

Probab=99.38  E-value=9.5e-10  Score=113.89  Aligned_cols=325  Identities=11%  Similarity=0.123  Sum_probs=173.4

Q ss_pred             HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144          116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV  195 (502)
Q Consensus       116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~  195 (502)
                      +.+.++.+.|++++.  ...     ...+|+++||+|+..|+..||.....+ +..+ +.-+|......|-...-+..+.
T Consensus        89 ~~~~~la~~l~~~~p--~~~-----~~v~f~~sGseA~e~AlklAr~~~~~~-g~~~-r~~ii~~~~~yHG~t~gals~t  159 (442)
T PRK13360         89 PKAFELANRIAEIAP--GGL-----NHVFFTNSGSESVDTALKIALAYHRAR-GEGS-RTRLIGRERGYHGVGFGGISVG  159 (442)
T ss_pred             HHHHHHHHHHHHhCC--CCC-----CEEEEeCCcHHHHHHHHHHHHHHHHhc-CCCC-CcEEEEEcCCcCCccHhhhhcc
Confidence            344467777888763  111     147999999999999999999753211 1100 1223334444454322222222


Q ss_pred             CC-------C--CCCEEEEecCCC-CC--cc--------cCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----
Q 037144          196 GI-------D--RKNIRAIKTTKS-SS--YG--------LSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----  251 (502)
Q Consensus       196 Gl-------g--~~~v~~v~~~~~-~~--~~--------~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----  251 (502)
                      |.       +  ...+..+|.... ..  +.        -..++||+++...  .+..+.+|++.......|.+-|    
T Consensus       160 g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~~aavivEpi~g~~G~~~~~~~f  237 (442)
T PRK13360        160 GIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADELERLVTLH--DASTIAAVIVEPVAGSTGVLIPPKGY  237 (442)
T ss_pred             CChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHHHHHHHHHHHHHHhc--CCCcEEEEEEccccCCCCCccCCHHH
Confidence            21       0  113344544310 00  00        0246777777532  1234567777776777788888    


Q ss_pred             hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCccc
Q 037144          252 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQY  330 (502)
Q Consensus       252 l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~y  330 (502)
                      +++|.++|++||+++++|.++.|+......+..-..++ ..|.+++  .|.++.. +..|.++.+++ . .+.+...+..
T Consensus       238 l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv-~PDivt~--gK~l~gG~~P~gav~~~~~-i-~~~~~~~~~~  312 (442)
T PRK13360        238 LQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGV-TPDLLTC--AKGLTNGAIPMGAVFVSSE-I-HDAFMQGPEA  312 (442)
T ss_pred             HHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCC-CCceeee--eeccccCccceEEEEEcHH-H-HHHhhcCCcc
Confidence            99999999999999999999965432221111111234 4787766  5988644 34677776543 2 2233221100


Q ss_pred             ccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCC-ee-
Q 037144          331 LKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRN-FS-  408 (502)
Q Consensus       331 l~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~-~~-  408 (502)
                      ..           . -+...|+. +.+.......++++.+..+   .+.++..++.++|++.|+++..+..+.+.. .+ 
T Consensus       313 ~~-----------~-~~~~~T~~-g~pl~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl  376 (442)
T PRK13360        313 GI-----------E-FFHGYTYS-GHPLACAAALATLDLYERE---GLLTRAARLAPYWEDALHSLRDAPHVIDIRNLGL  376 (442)
T ss_pred             cc-----------c-cccCCCCC-CCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccce
Confidence            00           0 00001111 1222233444455555333   356677788888888887653222221111 11 


Q ss_pred             EEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHH
Q 037144          409 LVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHV  488 (502)
Q Consensus       409 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di  488 (502)
                      ++.+.+.+...                   ..    .....++.+++.++|.+. ..   .+ ..+|++.. ...+++||
T Consensus       377 ~~~~~l~~~~~-------------------~~----~~~~~~~~~~l~~~Gvl~-~~---~~-~~lr~~Pp-l~~t~~ei  427 (442)
T PRK13360        377 VGAVELAPRDG-------------------KP----GKRAYEVFLKCFEKGLMI-RY---TG-DILALSPP-LIIEEAQI  427 (442)
T ss_pred             EEEEEEecCCC-------------------Cc----chhHHHHHHHHHHCCcEE-Ee---cC-CEEEEeCC-CccCHHHH
Confidence            22233322110                   00    112346677788888643 22   12 47999864 44677899


Q ss_pred             HHHHHHHHHHHHh
Q 037144          489 RAAWTVVQEHLEA  501 (502)
Q Consensus       489 ~~~~~~l~~~~~~  501 (502)
                      |++++.|.++.++
T Consensus       428 d~~~~~l~~~l~~  440 (442)
T PRK13360        428 DELFDILAQALKE  440 (442)
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999988765

>PRK06105 aminotransferase; Provisional

Probab=99.37  E-value=1.2e-09  Score=113.84  Aligned_cols=332  Identities=10%  Similarity=0.034  Sum_probs=176.1

Q ss_pred             HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH
Q 037144          115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI  194 (502)
Q Consensus       115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~  194 (502)
                      .+.+.++.+.|.+++..+..       ..+|+++||+|+-.|++.+|.....+ +..+ +..+|......|-...-+..+
T Consensus        91 ~~~~~~lae~L~~~~p~~~~-------~v~f~~SGseAve~AlKlar~~~~~~-g~t~-r~~il~~~~~yHG~t~~a~s~  161 (460)
T PRK06105         91 HGPVIDLAEKLVAMAPVPMS-------KVFFTNSGSEANDTVVKLVWYYNNAL-GRPE-KKKIISRQRGYHGVTIASASL  161 (460)
T ss_pred             CHHHHHHHHHHHHhCCCCCC-------EEEEeCCcHHHHHHHHHHHHHHHHhc-CCCC-CcEEEEecCccCCcchhheec
Confidence            34445566778887643222       57999999999999999998642111 1111 233444455556544333332


Q ss_pred             cCCC---------CCCEEEEecCCCCCc-----------ccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---
Q 037144          195 VGID---------RKNIRAIKTTKSSSY-----------GLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---  251 (502)
Q Consensus       195 ~Glg---------~~~v~~v~~~~~~~~-----------~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---  251 (502)
                      .|..         ...+..+|....-.+           .-..++||+++...  ....+.+|++.......|.+-|   
T Consensus       162 t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~~~~~--~~~~iAavIvEPiqg~gG~~~~~~~  239 (460)
T PRK06105        162 TGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRLANELEALILAE--GPDTIAAFIGEPVMGAGGVIVPPKT  239 (460)
T ss_pred             cCCcccccccCCCCCCCEEcCCCcccccccCCCChHHHHHHHHHHHHHHHHHc--CCCceEEEEEccccCCCCCccCCHH
Confidence            2211         112333432210000           01245677776431  1234567777665666687777   


Q ss_pred             -hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCcc
Q 037144          252 -LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQ  329 (502)
Q Consensus       252 -l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~  329 (502)
                       +++|.++|++||+.+++|.++.|+.....-+.....++ ..|.++++  |.++.. .+.|.++.++. . .+.+.....
T Consensus       240 yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v-~PDi~~~g--K~lggG~~P~~av~~~~~-i-~~~~~~~~~  314 (460)
T PRK06105        240 YWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGI-KPDILVMS--KQLSSSYQPLSAVLMNEK-V-YDPIADESG  314 (460)
T ss_pred             HHHHHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCC-CCCeeeee--cccccCcccceEEEEcHH-H-HHHHhcccc
Confidence             99999999999999999999966543322222112244 58888765  888755 35777777643 2 233322110


Q ss_pred             cccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC--Ce
Q 037144          330 YLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR--NF  407 (502)
Q Consensus       330 yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~--~~  407 (502)
                      ......            ...|. .+.+..+....++|+.+-.   .+++++..++.++|.+.|+++....++...  ..
T Consensus       315 ~~~~~~------------h~~T~-~gnpl~~aaa~a~L~~i~~---~~l~~~v~~~g~~l~~~L~~l~~~~~v~~vrG~G  378 (460)
T PRK06105        315 KIGTFG------------HGFTA-SGHPVAAAVALENLAIIEE---RDLVGNAAERGARLQARLRALADHPLVGEVRGVG  378 (460)
T ss_pred             cCcccc------------cCCCC-CCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecc
Confidence            000000            00000 1112222333344544433   256778888888888888765332222111  12


Q ss_pred             eEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHH
Q 037144          408 SLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESH  487 (502)
Q Consensus       408 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~d  487 (502)
                      .++.+.+.+....               ....+  ........+...+.++|.++ .+.   + .++|++.. ...+++|
T Consensus       379 l~~gie~~~~~~~---------------~~~~~--~~~~~a~~i~~~~~~~Gvl~-~~~---g-~~i~l~Pp-l~it~~e  435 (460)
T PRK06105        379 LIAAVELVADKAT---------------KTPFE--PPGKVGARANAAAHEHGVIS-RAM---G-DTLAFCPP-LIITAAQ  435 (460)
T ss_pred             eEEEEEEecCccc---------------CCCCC--chhHHHHHHHHHHHHCCeEE-Eec---C-CEEEEECC-CccCHHH
Confidence            2334444321100               00000  00123456777888889654 321   2 47998853 3467889


Q ss_pred             HHHHHHHHHHHHHh
Q 037144          488 VRAAWTVVQEHLEA  501 (502)
Q Consensus       488 i~~~~~~l~~~~~~  501 (502)
                      ||++++.+.++.++
T Consensus       436 id~~~~~l~~~l~~  449 (460)
T PRK06105        436 VDEMVDRFGRALDD  449 (460)
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999887654

>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]

Probab=99.37  E-value=1.2e-09  Score=105.26  Aligned_cols=165  Identities=10%  Similarity=0.074  Sum_probs=128.7

Q ss_pred             HHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCC
Q 037144           94 GEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENI  173 (502)
Q Consensus        94 ~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~  173 (502)
                      +..+.....-..+.|+.|.+..-+.+.+++.+.+.=|.|.+.     .+.++|+|+|.|..+.|......          
T Consensus        95 A~~~L~~~gGs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p-----~dI~LT~GAS~ai~~il~l~~~~----------  159 (475)
T KOG0258|consen   95 AKRILNDCGGSLGAYSDSQGVPGVRKHVAEFIERRDGIPADP-----EDIFLTTGASPAIRSILSLLIAG----------  159 (475)
T ss_pred             HHHHHHhcCCcccccccccCChhHHHHHHHHHHhccCCCCCH-----HHeeecCCCcHHHHHHHHHHhcC----------
Confidence            333444444456789999999999999999999999975442     37899999999986666555432          


Q ss_pred             CCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc---C
Q 037144          174 SKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV---D  250 (502)
Q Consensus       174 ~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i---d  250 (502)
                      +++=|+++-+-++-+...+..+|.   ..+..-+|+..+|.+|.++|++.+++.+ ++..|.++|+..+.|+||.+   .
T Consensus       160 ~~~GvliPiPQYPLYsAti~l~~~---~~v~YyLdEe~~W~ld~~el~~~~~eA~-k~i~~r~lvvINPGNPTGqvls~e  235 (475)
T KOG0258|consen  160 KKTGVLIPIPQYPLYSATISLLGG---TQVPYYLDEESNWSLDVAELERSVDEAR-KGINPRALVVINPGNPTGQVLSEE  235 (475)
T ss_pred             CCCceEeecCCCchhHHHHHHhCC---cccceeeccccCCCCCHHHHHHHHHHHh-ccCCceEEEEECCCCccchhhcHH
Confidence            344455565555555556678888   7777778887789999999999999987 88888888888889999998   6


Q ss_pred             ChhHHHHHHHHhCCEEEeecccccccc
Q 037144          251 PLKPLCDVAKQFGIWVHVDAAYAGSAC  277 (502)
Q Consensus       251 pl~eI~~i~~~~g~~lhVDaA~g~~~~  277 (502)
                      .|++|..+|+++|+.+..|..|--..+
T Consensus       236 ~ie~i~~fa~~~~l~llaDEVYQ~Nvy  262 (475)
T KOG0258|consen  236 NIEGIICFAAEEGLVLLADEVYQDNVY  262 (475)
T ss_pred             HHHHHHHHHHHcCeEEechHHHHhhcc
Confidence            799999999999999999998755443

>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]

Probab=99.37  E-value=1.7e-10  Score=113.72  Aligned_cols=219  Identities=13%  Similarity=0.119  Sum_probs=151.0

Q ss_pred             cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCch---
Q 037144          110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHC---  186 (502)
Q Consensus       110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~---  186 (502)
                      ..|....+|..    ++.+-|.+.         ++.+++|..|...++.....           .+..|+++...+.   
T Consensus        75 ~nPt~~~le~~----iaal~ga~~---------~l~fsSGmaA~~~al~~L~~-----------~g~~iV~~~~~Y~gT~  130 (409)
T KOG0053|consen   75 GNPTRDVLESG----IAALEGAAH---------ALLFSSGMAAITVALLHLLP-----------AGDHIVATGDVYGGTL  130 (409)
T ss_pred             CCCchHHHHHH----HHHHhCCce---------EEEecccHHHHHHHHHHhcC-----------CCCcEEEeCCCcccHH
Confidence            34555555554    778877653         57777777777666665543           3445555554443   


Q ss_pred             -hHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144          187 -AFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW  265 (502)
Q Consensus       187 -s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~  265 (502)
                       -+.+....+|+   ....+.++       |++.++++++++++      +|-+-.++|+++.+-||++|+++|+++|+.
T Consensus       131 ~~l~~~~~~~gi---e~~~vd~~-------~~~~~~~~i~~~t~------~V~~ESPsNPll~v~DI~~l~~la~~~g~~  194 (409)
T KOG0053|consen  131 RILRKFLPKFGG---EGDFVDVD-------DLKKILKAIKENTK------AVFLESPSNPLLKVPDIEKLARLAHKYGFL  194 (409)
T ss_pred             HHHHHHHHHhCc---eeeeechh-------hHHHHHHhhccCce------EEEEECCCCCccccccHHHHHHHHhhCCCE
Confidence             34555667888   77777654       67888888887554      899999999999999999999999999999


Q ss_pred             EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCccc
Q 037144          266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQ  343 (502)
Q Consensus       266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~  343 (502)
                      ++||..++++.. ++....      +||.++-+..||+++.-.  .|.+..+..+..++.. ....++..          
T Consensus       195 vvVDnTf~~p~~-~~pL~l------GADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~-~~~~~lg~----------  256 (409)
T KOG0053|consen  195 VVVDNTFGSPYN-QDPLPL------GADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLK-FLQEDLGW----------  256 (409)
T ss_pred             EEEeCCcCcccc-cChhhc------CCCEEEEeeeeeecCCcceeeeEEecCcHHHHHHHH-HHHHHhcC----------
Confidence            999999988743 332222      799999999999986533  3555554343322221 11122211          


Q ss_pred             ccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 037144          344 EVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEV  401 (502)
Q Consensus       344 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l  401 (502)
                                   -..++.+|..+|  |.+-+.-+++++.+++..+.+.|++.|.++-
T Consensus       257 -------------~~~p~~~~ll~R--glktl~lRi~~~~ena~~~A~~Le~~~~v~k  299 (409)
T KOG0053|consen  257 -------------CEDPFDLFLLSR--GLKTLHLRINKHSENALKIALLLEAHPKVKK  299 (409)
T ss_pred             -------------CCCHHHHHHHhc--CcchhhhhHHHHHHHHHHHHHHhhhCCceeE
Confidence                         125666676666  4455666888899999999999998888884

>PRK05639 4-aminobutyrate aminotransferase; Provisional

Probab=99.37  E-value=1.4e-09  Score=112.91  Aligned_cols=314  Identities=11%  Similarity=0.037  Sum_probs=171.5

Q ss_pred             HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEe-CCCCchhHHHHHHHc
Q 037144          117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYS-SDQTHCAFQKAAQIV  195 (502)
Q Consensus       117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~-s~~~H~s~~~aa~~~  195 (502)
                      ...++.+.|+++++....       ..+|++|||+||..|+..||...         ++..|+. ....|-...-+..+.
T Consensus        97 ~~~~lae~L~~~~p~~~~-------~v~f~~SGsEA~e~AlklAr~~t---------gr~~ii~~~~~yHG~t~~a~s~~  160 (457)
T PRK05639         97 RAIRVAEKLAEISPIENP-------KVLFGLSGSDAVDMAIKVSKFST---------RRPWILAFIGAYHGQTLGATSVA  160 (457)
T ss_pred             HHHHHHHHHHhhCCCCcC-------EEEEeCchHHHHHHHHHHHHHhc---------CCCeEEEECCCcCCccHHHHHHc
Confidence            344566777777653222       58999999999999999998641         2333443 444554433333333


Q ss_pred             CC--------C--CCCEEEEecCCCCC--cc----cCHH--------HHHHHHHHHHhcCCccEEEEEecCCccccccCC
Q 037144          196 GI--------D--RKNIRAIKTTKSSS--YG----LSAE--------SVLSQINLDVEAELIPLFLCATVGTTAITAVDP  251 (502)
Q Consensus       196 Gl--------g--~~~v~~v~~~~~~~--~~----~d~~--------~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp  251 (502)
                      |.        +  ...++.+|......  +.    -|.+        .|++.|......+....+|++.......|.+-|
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p  240 (457)
T PRK05639        161 AFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVP  240 (457)
T ss_pred             CCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCC
Confidence            31        1  12355565532100  00    1233        334433221111234566777655555566544


Q ss_pred             ----hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCC
Q 037144          252 ----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTN  327 (502)
Q Consensus       252 ----l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~  327 (502)
                          +++|.++|++||+++++|.++.|+.....-+.....++ ..|.+++  .|.++..++.|.++.++.- . +.+.  
T Consensus       241 ~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv-~PDiv~~--gK~l~gG~pi~av~~~~~i-~-~~~~--  313 (457)
T PRK05639        241 PENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWFASEWFEV-KPDLIIF--GKGVASGMGLSGVIGRKEL-M-DLTS--  313 (457)
T ss_pred             CHHHHHHHHHHHHHcCCEEEEechhhccCcCchHHHHHhcCC-CCCEEEe--chhhcCCCcceeEEehHHH-H-hhcC--
Confidence                88999999999999999999976432221111112244 5898885  6999766777888775442 1 1111  


Q ss_pred             cccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEecCC-
Q 037144          328 PQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD-KRFEVAFPR-  405 (502)
Q Consensus       328 ~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~-~~~~l~~~~-  405 (502)
                      ..+..                  |. .+.+..+.+..++++.+..+   +.+++..++.++|++.|+++ .++.++... 
T Consensus       314 ~~~~~------------------T~-~g~p~~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~~~Vr  371 (457)
T PRK05639        314 GSALL------------------TP-AANPVISAAAEATLEIIEEE---NLLKNALKVGEFIKKRLLEMKESFEVIGDVR  371 (457)
T ss_pred             CCccc------------------CC-CcCHHHHHHHHHHHHHHHHc---cHHHHHHHHHHHHHHHHHHHHHhCCCEEeec
Confidence            01111                  10 01111222333444444333   45566777888888888663 122232211 


Q ss_pred             -CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCc
Q 037144          406 -NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTM  484 (502)
Q Consensus       406 -~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~  484 (502)
                       ...++.+.+..+...                   .   ..+....+.+.+.++|.+. .+. ..+..++|++.. ...+
T Consensus       372 G~Gl~~gve~~~~~~~-------------------~---~~~~~~~~~~~~~~~Gv~~-~~~-g~~~~~lr~~Pp-l~it  426 (457)
T PRK05639        372 GKGLMIGVEIVKENGK-------------------P---DPELTGKICWRAFELGLIL-PSY-GMFGNVIRITPP-LVIT  426 (457)
T ss_pred             cceeEEEEEEecCCCC-------------------C---CHHHHHHHHHHHHhCCeEE-eec-CCCCCEEEEeCC-CccC
Confidence             122344444321100                   0   0233467788888889654 332 112358999874 4567


Q ss_pred             HHHHHHHHHHHHHHHH
Q 037144          485 ESHVRAAWTVVQEHLE  500 (502)
Q Consensus       485 ~~di~~~~~~l~~~~~  500 (502)
                      ++|||++++.+.+..+
T Consensus       427 ~~~id~~~~~l~~~l~  442 (457)
T PRK05639        427 KEIAEKGLEIMERAIK  442 (457)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            7799999999998765

>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated

Probab=99.37  E-value=3.3e-10  Score=113.38  Aligned_cols=251  Identities=12%  Similarity=0.064  Sum_probs=144.2

Q ss_pred             CCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEE-----
Q 037144          104 VGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVV-----  178 (502)
Q Consensus       104 ~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v-----  178 (502)
                      .-..|..+|.+..||+.    ++++||.+.         +++|.+|+.++.....+....          ++..+     
T Consensus        66 GDD~Y~gdpSv~~Lee~----vael~G~E~---------alpthqGRgaE~Il~~~~~~~----------~g~e~g~~~~  122 (467)
T TIGR02617        66 GDEAYSGSRSYYALAES----VKNIFGYQY---------TIPTHQGRGAEQIYIPVLIKK----------REQEKGLDRS  122 (467)
T ss_pred             CCcccccCchHHHHHHH----HHHHhCCce---------EEECCCCchHHHHHHHhhccc----------cccccccccc
Confidence            33468899999988877    457888764         688888999987776655431          22222     


Q ss_pred             --EeCCCCchhH-HHHHHHcCCCCCCEEEEecC--------CCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcc-c
Q 037144          179 --YSSDQTHCAF-QKAAQIVGIDRKNIRAIKTT--------KSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTA-I  246 (502)
Q Consensus       179 --~~s~~~H~s~-~~aa~~~Glg~~~v~~v~~~--------~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~-~  246 (502)
                        +++...|+-- .-.+.+.|.   .++.++.+        ..-+|.+|+++|+++|++... ...+ ++..+..+|. -
T Consensus       123 ~~~v~hn~~fett~g~a~l~G~---~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~-~~i~-~v~~tlt~N~~G  197 (467)
T TIGR02617       123 KMVAFSNYFFDTTQGHSQINGC---TARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGP-NNVP-YIVATITCNSAG  197 (467)
T ss_pred             ccccceEEEEecchHHHHHcCc---eeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCC-CCce-eeeeeEEEecCC
Confidence              2233445443 335677787   76665432        112479999999999986421 1222 3333333333 3


Q ss_pred             ccc---CChhHHHHHHHHhCCEEEeecccccc-cccCc---------cchhhh-cCCCCCCeeEEccCCcCCCCCcceEE
Q 037144          247 TAV---DPLKPLCDVAKQFGIWVHVDAAYAGS-ACICP---------EFRHFI-DGVECVDSFSFNPHKWLFTTLDCCCL  312 (502)
Q Consensus       247 G~i---dpl~eI~~i~~~~g~~lhVDaA~g~~-~~~~~---------~~~~~~-~~~~~aDsi~~~~hK~l~~p~~~g~~  312 (502)
                      |..   +.++++.++|++||+.+|+|||.-.- +.+..         ..+... .-.+.+|++++++.|.+++|.| |++
T Consensus       198 Gqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglgApvG-g~L  276 (467)
T TIGR02617       198 GQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAMVPMG-GLL  276 (467)
T ss_pred             CEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCCCccc-ceE
Confidence            433   67889999999999999999986331 22111         011111 0124899999999999999964 455


Q ss_pred             EeeCc---hhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHH
Q 037144          313 WVKDP---SCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLF  389 (502)
Q Consensus       313 ~~r~~---~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l  389 (502)
                      ..++.   ..+...-.....|-           +..-|+.+   .+|-..+++  ..|+.   ..-...+++.....+||
T Consensus       277 ag~d~~~~~l~~~~~~~~i~~E-----------Gf~tYGGl---agrd~ea~a--~Gl~e---~~~~~yl~~ri~qv~yl  337 (467)
T TIGR02617       277 CFKDDSFFDVYTECRTLCVVQE-----------GFPTYGGL---EGGAMERLA--VGLYD---GMNLDWLAYRINQVQYL  337 (467)
T ss_pred             EecchhHHHHHHHHHhhccccc-----------CCcCcCch---hHHHHHHHH--hhhhh---cccHHHHHHHHHHHHHH
Confidence            56665   33322211121111           11111100   112112221  12221   11235566677778899


Q ss_pred             HHHHhcCCCeEEec
Q 037144          390 ERLVTSDKRFEVAF  403 (502)
Q Consensus       390 ~~~l~~~~~~~l~~  403 (502)
                      .+.|.+. |+.++.
T Consensus       338 ~~~L~~~-Gvpi~~  350 (467)
T TIGR02617       338 VNGLEEI-GVVCQQ  350 (467)
T ss_pred             HHHHHhC-CCcEEe
Confidence            9999886 787765

Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.

>PRK07678 aminotransferase; Validated

Probab=99.36  E-value=3.8e-09  Score=109.83  Aligned_cols=327  Identities=12%  Similarity=0.071  Sum_probs=173.7

Q ss_pred             HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcC
Q 037144          117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVG  196 (502)
Q Consensus       117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~G  196 (502)
                      .+.++.+.|.++++...        ..+|++|||+|+..|+..||..... .|..+ +..+|......|-...-+....|
T Consensus        90 ~~~~lae~l~~~~~~~~--------~v~f~~sGseA~e~AlklAr~~t~~-~g~~~-r~~ii~~~~~yHG~t~~als~~~  159 (451)
T PRK07678         90 PAIKLAEKLNEWLGGEY--------VIFFSNSGSEANETAFKIARQYHAQ-KGEPH-RYKFISRYRAYHGNSMGALAATG  159 (451)
T ss_pred             HHHHHHHHHHHhCCCCC--------EEEEeCCcHHHHHHHHHHHHHHHHh-cCCCC-CcEEEEECCCcCCccHHHhhcCC
Confidence            44557777888775432        4799999999999999999975322 12111 22334344444543333333322


Q ss_pred             CC---------CCCEEEEecCCCCCccc---------CH---HHHHHHHHHHHhcCCccEEEEEecCCccccccCC----
Q 037144          197 ID---------RKNIRAIKTTKSSSYGL---------SA---ESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----  251 (502)
Q Consensus       197 lg---------~~~v~~v~~~~~~~~~~---------d~---~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----  251 (502)
                      ..         ...+..+|...  .++.         |.   +.+++.|+..  .+..+.+|++.-.....|.+-|    
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~iAAvi~EPiqg~gG~~~~~~~f  235 (451)
T PRK07678        160 QAQRKYKYEPLAPGFLHVPPPD--CYRMPGIESEDIYDLECVKEIDRVMTWE--LSETIAAVIMEPIITGGGVLMPPQDY  235 (451)
T ss_pred             CcccccccCCCCCCCEEeCCCc--cccccccCChHHHHHHHHHHHHHHHHhc--CCCceEEEEEccccCCCCcccCCHHH
Confidence            10         11234444321  1111         12   2355556421  1234566777655555677755    


Q ss_pred             hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCccc
Q 037144          252 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQY  330 (502)
Q Consensus       252 l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~y  330 (502)
                      +++|.++|++||+.+++|.++.|+.....-+..-..|+ ..|.++++  |.++.. +..|.+++++.-  .+.+.....+
T Consensus       236 l~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~gv-~PDivt~g--K~lggG~~Pi~av~~~~~i--~~~~~~~~~~  310 (451)
T PRK07678        236 MKAVKEICQKHGALLISDEVICGFGRTGKAFGFMNYGV-KPDIITMA--KGITSAYLPLSATAVKKEI--YEAFKGKGEY  310 (451)
T ss_pred             HHHHHHHHHHcCCEEEEeehhhcCCcCchhHHHHhcCC-CCCEEEee--cccccCCcceeEEEEcHHH--HHHHhccCcc
Confidence            99999999999999999999876633221111111244 58988874  988766 368888886542  2333221110


Q ss_pred             --ccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEecC
Q 037144          331 --LKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTS----DKRFEVAFP  404 (502)
Q Consensus       331 --l~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~----~~~~~l~~~  404 (502)
                        +....               |+ .+.+..+.+..++++.+..+   .+.++..++.++|.+.|++    .+.+.-+ .
T Consensus       311 ~~~~h~~---------------T~-~gnp~~~aaa~a~l~~l~~~---~~~~~~~~~g~~l~~~l~~~~~~~~~v~~v-r  370 (451)
T PRK07678        311 EHFRHVN---------------TF-GGNPAACALALKNLEIMENE---NLIERSAQLGELLLEQLKEELGEHPLVGDI-R  370 (451)
T ss_pred             cccccCC---------------CC-CcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHhcCCCEEEE-E
Confidence              00000               10 11112223334444444333   3556677777777777743    2321111 1


Q ss_pred             CCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEee--eECCEEEEEEEecCCC
Q 037144          405 RNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHA--IVGGIYVLRFAAGNSM  482 (502)
Q Consensus       405 ~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~--~~~g~~~lR~~~~~~~  482 (502)
                      -...++.+.+.......                  . ....+...++.+.+.++|.++....  ...+...+|++.. ..
T Consensus       371 g~Gl~~~i~~~~~~~~~------------------~-~~~~~~a~~i~~~l~~~Gv~~~~~g~~v~~~~~~lrl~Pp-l~  430 (451)
T PRK07678        371 GKGLLVGIELVNDKETK------------------E-PADNDKVASVVAACKEKGLIIGKNGDTVAGYNNVLTLSPP-LV  430 (451)
T ss_pred             eeceEEEEEEecCCccc------------------C-cCchHHHHHHHHHHHHCCcEEeecCccccCCCCEEEEECC-Cc
Confidence            11234444443211000                  0 0002335678888888997543211  1123467999864 34


Q ss_pred             CcHHHHHHHHHHHHHHHHhC
Q 037144          483 TMESHVRAAWTVVQEHLEAF  502 (502)
Q Consensus       483 t~~~di~~~~~~l~~~~~~~  502 (502)
                      .+++|||++++++.++.+++
T Consensus       431 it~~eid~~~~~l~~~l~~~  450 (451)
T PRK07678        431 ISSEEIAFIVGTLKTALERI  450 (451)
T ss_pred             CCHHHHHHHHHHHHHHHHhc
Confidence            56779999999999987653

>PRK08593 4-aminobutyrate aminotransferase; Provisional

Probab=99.35  E-value=6.4e-09  Score=107.95  Aligned_cols=318  Identities=12%  Similarity=0.046  Sum_probs=169.8

Q ss_pred             HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144          116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV  195 (502)
Q Consensus       116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~  195 (502)
                      +.+.++.+.|++++.-...      ...+|+++||+||..|+..||...    +    +..+|......|-...-+..+.
T Consensus        85 ~~~~~lae~L~~~~p~~~~------~~v~f~~SGseA~e~AiklAr~~t----g----r~~ii~~~~~YHG~t~~als~s  150 (445)
T PRK08593         85 EPLVRLAKKLCELAPGDFE------KRVTFGLSGSDANDGIIKFARAYT----G----RPYIISFTNAYHGSTYGSLSMS  150 (445)
T ss_pred             HHHHHHHHHHHHhCCCCCC------CEEEECCchHHHHHHHHHHHHHhh----C----CCeEEEECCCcCCCcHHHHhhc
Confidence            4445566777777642210      157999999999999999998752    1    2234444445565544444333


Q ss_pred             CCC----------CCCEEEEecCCCCC---cccCH-------HHHHHHHHHHHhcCCccEEEEEecCCccccccCC----
Q 037144          196 GID----------RKNIRAIKTTKSSS---YGLSA-------ESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----  251 (502)
Q Consensus       196 Glg----------~~~v~~v~~~~~~~---~~~d~-------~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----  251 (502)
                      +..          ...++.+|......   ...+.       +++++.+.... ....+.+|++.......|.+-|    
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~iAavI~EPv~g~gG~~~~~~~y  229 (445)
T PRK08593        151 GISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYL-PADEVACIVIETIQGDGGLLEPVPGY  229 (445)
T ss_pred             CCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhc-CCCceEEEEEccccCCCCCcCCCHHH
Confidence            310          11244555431100   01122       33444333211 1123556777666666787766    


Q ss_pred             hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccc
Q 037144          252 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYL  331 (502)
Q Consensus       252 l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl  331 (502)
                      +++|.++|++||+++++|.++.|+......+.....++ ..|.+++  .|.++..+..|+++.++. . .+.+.. ..+.
T Consensus       230 l~~l~~lc~~~g~llI~DEv~tg~GrtG~~~a~~~~gv-~pDi~t~--gK~l~~G~p~gav~~~~~-i-~~~~~~-~~~~  303 (445)
T PRK08593        230 FEALYKFCREHGILFAVDDIQQGLGRTGKWSSISHFNI-TPDLMSF--GKSLAGGMPMSAIVGRKE-I-MESLEA-PAHL  303 (445)
T ss_pred             HHHHHHHHHHcCCEEEEechhhCCCcCchHHHHHhcCC-CCCEeee--cccccCCcccEEEEEcHH-H-Hhhhcc-CCCC
Confidence            99999999999999999999866532211111111133 4687765  588875566788777633 2 223321 1111


Q ss_pred             cCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEecCC--Cee
Q 037144          332 KNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD-KRFEVAFPR--NFS  408 (502)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~-~~~~l~~~~--~~~  408 (502)
                      .                  |. .+.+....+..++++.+-.+   +++++..++.++|++.|+++ ....++...  ...
T Consensus       304 ~------------------T~-~~~pl~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl  361 (445)
T PRK08593        304 F------------------TT-GANPVSCAAALATIDMIEDE---SLLQRSAEKGEYARKRFDQWVSKYNFVGDVRGYGL  361 (445)
T ss_pred             C------------------CC-CCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeccce
Confidence            1                  10 11111223344455544332   45667777777777777653 111122111  112


Q ss_pred             EEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHH
Q 037144          409 LVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHV  488 (502)
Q Consensus       409 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di  488 (502)
                      ++.+.+......                   . .........+...+.++|.++ .+.   +...+|++.. ...+++||
T Consensus       362 ~~gi~l~~~~~~-------------------~-~~~~~~~~~~~~~~~~~Gv~~-~~~---~~~~lr~~p~-l~~t~~~i  416 (445)
T PRK08593        362 SIGIDIVSDKKL-------------------K-TRDNEAALKICNYCFEHGVVI-IAV---AGNVLRFQPP-LVITYEQL  416 (445)
T ss_pred             EEEEEEecCCCc-------------------C-CCcHHHHHHHHHHHHHCCeEE-ecc---CCCEEEEECC-CccCHHHH
Confidence            233333221000                   0 000233456788888889643 221   2357999875 45667799


Q ss_pred             HHHHHHHHHHHHh
Q 037144          489 RAAWTVVQEHLEA  501 (502)
Q Consensus       489 ~~~~~~l~~~~~~  501 (502)
                      +++++++.++.++
T Consensus       417 d~~~~~l~~~l~~  429 (445)
T PRK08593        417 DTALNTIEQAFTA  429 (445)
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999987654

>PRK07495 4-aminobutyrate aminotransferase; Provisional

Probab=99.34  E-value=5.9e-09  Score=107.51  Aligned_cols=317  Identities=13%  Similarity=0.043  Sum_probs=169.6

Q ss_pred             HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144          116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV  195 (502)
Q Consensus       116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~  195 (502)
                      +...++.+.+.+++.-+..      ...+|++|||+|+..|+..||...    +    +..+|......|-...-+..+.
T Consensus        83 ~~~~~la~~l~~~~p~~~~------~~v~f~~SGseA~e~AlklAr~~t----g----r~~ii~~~~~yHG~t~~~~~~~  148 (425)
T PRK07495         83 ENYVRLAERLNALVPGDFA------KKTIFVTTGAEAVENAVKIARAAT----G----RSAVIAFGGGFHGRTFMGMSLT  148 (425)
T ss_pred             HHHHHHHHHHHHhCCCCCC------CEEEECCchHHHHHHHHHHHHHhh----C----CCeEEEECCCcCCccHHHhhhc
Confidence            3444567777887642210      157999999999999999998751    1    2224444544554332222222


Q ss_pred             CC--------C--CCCEEEEecCCCCCcccC----HHHHHHHHHHHHhcCCccEEEEEecCCccccccC----ChhHHHH
Q 037144          196 GI--------D--RKNIRAIKTTKSSSYGLS----AESVLSQINLDVEAELIPLFLCATVGTTAITAVD----PLKPLCD  257 (502)
Q Consensus       196 Gl--------g--~~~v~~v~~~~~~~~~~d----~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id----pl~eI~~  257 (502)
                      |.        +  ...+..+|.+.+.+ .++    ++++++.++... .+..+.+|++.......|.+-    -+++|.+
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~l~~~~~~~~-~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~  226 (425)
T PRK07495        149 GKVVPYKVGFGAMMPDVYHVPFPVELH-GVSVEQSLAALDKLFKADV-DPQRVAAIIIEPVQGEGGFYPAPAAFMKALRE  226 (425)
T ss_pred             CCCcccccCCCCCCCCeEEecCCcccc-cccHHHHHHHHHHHHHhcc-CCCceEEEEECCccCCCCCccCCHHHHHHHHH
Confidence            21        1  11455666543211 233    344466554311 123355666665444566553    3899999


Q ss_pred             HHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCC
Q 037144          258 VAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATD  337 (502)
Q Consensus       258 i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~  337 (502)
                      +|++||+++++|.++.++.....-+.....++ ..|.+++  .|.++..+..|+++.++. . .+.+...  ....    
T Consensus       227 l~~~~g~llI~DEv~tG~gr~G~~~a~~~~gv-~pDi~tl--sK~l~~G~pigav~~~~~-i-~~~~~~~--~~~~----  295 (425)
T PRK07495        227 LCDQHGILLIADEVQTGFARTGKLFAMEHHEV-AADLTTM--AKGLAGGFPLAAVTGRAE-I-MDAPGPG--GLGG----  295 (425)
T ss_pred             HHHHcCCEEEEechhhcCCcCCCceeecccCC-CCCEEee--hhhhcCCccceEEEEcHH-H-HhccCCC--CcCC----
Confidence            99999999999999976533221111101122 4676665  599876677888887543 2 2222111  1100    


Q ss_pred             CCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEecCCCeeEEEEE
Q 037144          338 QEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD----KRFEVAFPRNFSLVCFR  413 (502)
Q Consensus       338 ~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~----~~~~l~~~~~~~~v~f~  413 (502)
                                   ++ .+.+..+....++++.+..+   ++.++..++.++|+++|+++    |.+.-+.- ...++.+.
T Consensus       296 -------------T~-~~~pl~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG-~Gl~~~ie  357 (425)
T PRK07495        296 -------------TY-GGNPLGIAAAHAVLDVIEEE---DLCERANQLGNRLKQRLASLRETVPEIADIRG-PGFMNAVE  357 (425)
T ss_pred             -------------CC-CCCHHHHHHHHHHHHHHHhc---hHHHHHHHHHHHHHHHHHHHHhhCCCeeeeec-CceEEEEE
Confidence                         11 11111222233455554332   35566666777777776543    32211111 12344444


Q ss_pred             eecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHH
Q 037144          414 VTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWT  493 (502)
Q Consensus       414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~  493 (502)
                      +.+....                  ..   .......+.+.+.++|.+..... .. ..++|+... ...+++++|++++
T Consensus       358 l~~~~~~------------------~~---~~~~~~~~~~~~~~~Gvl~~~~g-~~-~~~~r~~Pp-l~it~~~id~~~~  413 (425)
T PRK07495        358 FNDADSG------------------LP---SAEFANRVRLKALEKGLILLTCG-VH-GNVIRFLAP-ITIQDDVFAEALD  413 (425)
T ss_pred             EecCCCC------------------Cc---cHHHHHHHHHHHHHCCeEEeecC-CC-CCEEEEeCC-CccCHHHHHHHHH
Confidence            4332100                  00   01234577888888897543221 11 357999853 4578889999999


Q ss_pred             HHHHHHHh
Q 037144          494 VVQEHLEA  501 (502)
Q Consensus       494 ~l~~~~~~  501 (502)
                      .|.++.++
T Consensus       414 ~l~~~l~~  421 (425)
T PRK07495        414 ILEASILE  421 (425)
T ss_pred             HHHHHHHH
Confidence            99988764

>PRK05965 hypothetical protein; Provisional

Probab=99.34  E-value=3.9e-09  Score=109.89  Aligned_cols=329  Identities=12%  Similarity=0.068  Sum_probs=175.5

Q ss_pred             HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144          116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV  195 (502)
Q Consensus       116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~  195 (502)
                      +...++.+.|.+++.-+.       ...+|+++||+|+-.|++.||.....+ |..+ +..+|......|-...-+....
T Consensus        90 ~~~~~lae~L~~~~p~~~-------~~v~f~~sGSEAve~AlKlAr~~~~~~-g~~~-r~kii~~~~~YHG~t~~a~s~t  160 (459)
T PRK05965         90 EPAIRLAAKLAERAPGSL-------NHVYFTLGGSDAVDSAVRFIRHYWNAT-GRPS-KKQFISLERGYHGSSSVGAGLT  160 (459)
T ss_pred             HHHHHHHHHHHhhCCCCc-------CEEEEeCChhHHHHHHHHHHHHHHHhc-CCCC-ccEEEEecCCcCcccHHHHHhc
Confidence            344456677777763211       257999999999999999999764221 1111 1224444444564333232332


Q ss_pred             CC-------C--CCCEEEEecCCC--CCcccC--------HHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----h
Q 037144          196 GI-------D--RKNIRAIKTTKS--SSYGLS--------AESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----L  252 (502)
Q Consensus       196 Gl-------g--~~~v~~v~~~~~--~~~~~d--------~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l  252 (502)
                      |.       |  ...+..+|....  ..+.-|        +++|++.|...  ....+.+|++.-.....|.+-|    +
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~--~~~~iAAvIvEPiqg~gG~~~p~~~yl  238 (459)
T PRK05965        161 ALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAEL--GADNVAAFFCEPIQGSGGVIVPPKGWL  238 (459)
T ss_pred             CCchhhcccCCCCCCCEEcCCCcccccccCCChHHHHHHHHHHHHHHHHhc--CCCceEEEEEeccccCCCCccCCHHHH
Confidence            21       1  122344443210  001113        25677777532  1133556666654445566533    8


Q ss_pred             hHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-cceEEEeeCchhhhhhhcCCcc--
Q 037144          253 KPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-DCCCLWVKDPSCLLSTLSTNPQ--  329 (502)
Q Consensus       253 ~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~~~--  329 (502)
                      ++|.++|++||+.+++|..+.|+.....-+.....++ ..|.++++  |.++..+ ..|.++++++-  .+.+.....  
T Consensus       239 ~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~g--Kgl~gG~~Pi~av~~~~~i--~~~~~~~~~~~  313 (459)
T PRK05965        239 KAMREACRELGILFVADEVITGFGRTGPLFACEAEGV-VPDLMTVA--KGLTSGYVPMGAVLMSDHV--YQGIADGAGAA  313 (459)
T ss_pred             HHHHHHHHHcCCEEEEechhccCccCchhhhHhhcCC-CCCeEEec--hhhccCCcceeEEEEcHHH--HHHHhcccccc
Confidence            8999999999999999999877643322221112244 58999986  8887664 68888876542  223321110  


Q ss_pred             -cccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC--C
Q 037144          330 -YLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR--N  406 (502)
Q Consensus       330 -yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~--~  406 (502)
                       .+....               |. .+.+.......++++.+-++   ++.++..++.++|.+.|+++....++...  .
T Consensus       314 ~~~~h~~---------------T~-~gnpl~~Aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~  374 (459)
T PRK05965        314 APVGHGY---------------TY-SAHPVSAAVGLEVLRLYHEG---GLLANGQKAGPRFAAGLDALRAHPLVGDVRGR  374 (459)
T ss_pred             ccccccC---------------CC-CCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHhhccCCCEEEEeec
Confidence             000000               10 11122223333444444333   45677788888888888765222122111  1


Q ss_pred             eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHH
Q 037144          407 FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMES  486 (502)
Q Consensus       407 ~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~  486 (502)
                      ..++.+.+.......                 ...........++.+.+.++|.++. +   .+..++|++.. ...+++
T Consensus       375 Gl~~gie~~~~~~~~-----------------~~~~~~~~~~~~i~~~~~~~Gll~~-~---~g~~~i~~~Pp-L~it~~  432 (459)
T PRK05965        375 GLLGALELVADKATK-----------------TPFDAALDPADRIFDRAYANGLVFR-A---FGDGVLGFAPA-LCCTEG  432 (459)
T ss_pred             ceEEEEEEecccccc-----------------CCCCchhHHHHHHHHHHHhCCeEEE-e---cCCcEEEEECC-CcCCHH
Confidence            223344443211000                 0000001235677788888897542 2   23457898853 446778


Q ss_pred             HHHHHHHHHHHHHHh
Q 037144          487 HVRAAWTVVQEHLEA  501 (502)
Q Consensus       487 di~~~~~~l~~~~~~  501 (502)
                      ||+++++.+.+..++
T Consensus       433 ei~~~~~~l~~~l~~  447 (459)
T PRK05965        433 EFDLIFERTRKTLDD  447 (459)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999887754

>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=99.34  E-value=1.2e-09  Score=112.68  Aligned_cols=319  Identities=13%  Similarity=0.040  Sum_probs=165.8

Q ss_pred             HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhH---HHHH
Q 037144          116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAF---QKAA  192 (502)
Q Consensus       116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~---~~aa  192 (502)
                      +.+.++.+.|.++++....       ...|+++||+|+..|+..||...    |    +..+|......|-..   ..+.
T Consensus        93 ~~~~~la~~L~~~~~~~~~-------~v~f~~SGsEA~e~AiklAr~~t----g----r~~ii~~~~~yHG~td~~~~~~  157 (433)
T PRK00615         93 EQEILFAEELFSYLGLEDH-------KIRFVSSGTEATMTAVRLARGIT----G----RSIIIKFLGCYHGHADTLLQGI  157 (433)
T ss_pred             HHHHHHHHHHHHhCCCCcC-------EEEEeCchHHHHHHHHHHHHHhh----C----CCEEEEEcCccCCCCcccCccc
Confidence            3455677788888754322       57999999999999999999752    1    222333344445422   1111


Q ss_pred             HHcCCCCCCE-EEEecCCCCCc-----ccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCCh----hHHHHHHHHh
Q 037144          193 QIVGIDRKNI-RAIKTTKSSSY-----GLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPL----KPLCDVAKQF  262 (502)
Q Consensus       193 ~~~Glg~~~v-~~v~~~~~~~~-----~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl----~eI~~i~~~~  262 (502)
                      ...+-..... ...........     .-|+++|++.+.+..   ..+.+|++.......|.+-|.    ++|.++|++|
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~---~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~  234 (433)
T PRK00615        158 SFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLG---HRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRT  234 (433)
T ss_pred             ccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcC---CceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHc
Confidence            1111100000 00000000000     127899999886432   335577777766777888775    4999999999


Q ss_pred             CCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCC-cccccCccCCCCCc
Q 037144          263 GIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTN-PQYLKNEATDQEPK  341 (502)
Q Consensus       263 g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~-~~yl~~~~~~~~~~  341 (502)
                      |+.+++|.++.|+ ...........++ ..|.+++  .|.++..+..|+++.++. . .+.+... ..+....       
T Consensus       235 g~llI~DEv~tG~-R~G~~ga~~~~gv-~PDi~~~--gK~lggG~p~~av~~~~~-i-~~~~~~~~~~~~~~T-------  301 (433)
T PRK00615        235 GSLSIMDEVVTGF-RVAQGGAAAIYHV-KPDITVY--GKILGGGLPAAAVVAHKS-I-MDHLAPEGTIFQAGT-------  301 (433)
T ss_pred             CCEEEEEcccccc-cccHhHHHHhcCC-CCCeEEE--cccccCCcceeeeeecHH-H-HhhhcCCCCcccCCC-------
Confidence            9999999999655 2221111111234 5788775  699876566777777544 2 2233211 1111110       


Q ss_pred             ccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCeEEecCCCeeEEEEEeecCc
Q 037144          342 EQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD---KRFEVAFPRNFSLVCFRVTPSA  418 (502)
Q Consensus       342 ~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~---~~~~l~~~~~~~~v~f~~~~~~  418 (502)
                                . .+.+..+.+..++++.+..+   +.+++..++.++|.++|++.   .++.+.......++.+.+....
T Consensus       302 ----------~-~g~p~~~aa~la~L~~i~~~---~~~~~~~~~g~~l~~~l~~~~~~~g~~v~~~r~G~~~~i~~~~~~  367 (433)
T PRK00615        302 ----------L-SGNPLAMAAGKASINLCREQ---GFYTQLSTLEQNFLSPIEEMIRSQGFPVSLVRYGSMFSFFFNENR  367 (433)
T ss_pred             ----------C-cccHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeeceEEEEEEeCCC
Confidence                      0 01122233444455555333   34666666777776555441   1332211112234445543221


Q ss_pred             chhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144          419 VMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEH  498 (502)
Q Consensus       419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~  498 (502)
                      ..          +...     ......+....+...+.++|.+ +.+..... .    .++.-+ +++|||++++++.++
T Consensus       368 ~~----------~~~~-----~~~~~~~~~~~~~~~l~~~Gv~-~~~~~~~~-~----~ls~~h-t~~did~~~~a~~~~  425 (433)
T PRK00615        368 PN----------NLAE-----AQLSDIEAFQTFYQSAFSKGVY-LSPSPFEA-S----FLSSAH-SMENLDYAQNVLIDS  425 (433)
T ss_pred             CC----------ChHH-----HhhCCHHHHHHHHHHHHHCCee-ecCccccc-c----ceecCC-CHHHHHHHHHHHHHH
Confidence            00          0000     0000123456788888889964 33322111 1    222223 566999999999998


Q ss_pred             HHh
Q 037144          499 LEA  501 (502)
Q Consensus       499 ~~~  501 (502)
                      +++
T Consensus       426 ~~~  428 (433)
T PRK00615        426 LEK  428 (433)
T ss_pred             HHH
Confidence            764

>PRK09792 4-aminobutyrate transaminase; Provisional

Probab=99.33  E-value=3e-09  Score=109.82  Aligned_cols=314  Identities=12%  Similarity=0.061  Sum_probs=171.5

Q ss_pred             HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCe-EEEeCCCCchhHHHHHHH
Q 037144          116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKL-VVYSSDQTHCAFQKAAQI  194 (502)
Q Consensus       116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~-~v~~s~~~H~s~~~aa~~  194 (502)
                      +.+.++.+.|++++.....      ...+|+++||+|+..|+..||...         ++. +|......|-...-+..+
T Consensus        83 ~~~~~la~~l~~~~p~~~~------~~~~f~~sGseA~e~AlklAr~~t---------gr~~ii~~~~~yHG~t~~~~s~  147 (421)
T PRK09792         83 ESYVTLAEKINALAPVSGQ------AKTAFFTTGAEAVENAVKIARAHT---------GRPGVIAFSGGFHGRTYMTMAL  147 (421)
T ss_pred             HHHHHHHHHHHHhCCCCCC------ceEEEeCChHHHHHHHHHHHHHhc---------CCCeEEEECCCcCCccHHHHhh
Confidence            3445566777777643211      157899999999999999998641         223 333444455433223232


Q ss_pred             cCC--------C--CCCEEEEecCCCCCccc----CHHHHHHHHHHHHhcCCccEEEEEecCCccccccC-C---hhHHH
Q 037144          195 VGI--------D--RKNIRAIKTTKSSSYGL----SAESVLSQINLDVEAELIPLFLCATVGTTAITAVD-P---LKPLC  256 (502)
Q Consensus       195 ~Gl--------g--~~~v~~v~~~~~~~~~~----d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id-p---l~eI~  256 (502)
                      .|.        +  ...+..+|...+.+ .+    +++.+++.+++.. ....+.+|++.....+.|..- |   +++|.
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~v~~p~~~~-~~~~~~~~~~l~~~~~~~~-~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~  225 (421)
T PRK09792        148 TGKVAPYKIGFGPFPGSVYHVPYPSDLH-GISTQDSLDAIERLFKSDI-EAKQVAAIIFEPVQGEGGFNVAPKELVAAIR  225 (421)
T ss_pred             cCCCcccccCCCCCCCCcEEcCCCcccc-cccHHHHHHHHHHHHHhcc-CCCceEEEEEccccCCCCCccCCHHHHHHHH
Confidence            221        1  11344555432111 12    3467777775421 123356777777677778653 5   99999


Q ss_pred             HHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccC
Q 037144          257 DVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEAT  336 (502)
Q Consensus       257 ~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~  336 (502)
                      ++|++||+++++|.++.++......+....-++ ..|.+++  .|.++..+..|+++.++. . .+.+...  ....   
T Consensus       226 ~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~~-~pDi~t~--gK~l~~G~pigav~~~~~-i-~~~~~~~--~~~~---  295 (421)
T PRK09792        226 RLCDEHGIVMIADEVQSGFARTGKLFAMDHYAD-KPDLMTM--AKSLAGGMPLSGVVGNAN-I-MDAPAPG--GLGG---  295 (421)
T ss_pred             HHHHHcCCEEEEeccccCCCCCCchhHHHhcCC-CCcEEEe--ehhhcCCCceEEEEEcHH-H-HhccCCC--CcCC---
Confidence            999999999999999987643221111000122 5676555  699987777888877533 2 2222110  0000   


Q ss_pred             CCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEecCCC-eeEEE
Q 037144          337 DQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTS----DKRFEVAFPRN-FSLVC  411 (502)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~----~~~~~l~~~~~-~~~v~  411 (502)
                                    |+ .+.+....+..++++.+..+   +.+++..++.+++.+.|++    .|.+  ..... ..++.
T Consensus       296 --------------T~-~gnpl~~aaa~a~l~~l~~~---~~~~~~~~~g~~l~~~l~~l~~~~p~v--~~vrG~Gl~~~  355 (421)
T PRK09792        296 --------------TY-AGNPLAVAAAHAVLNIIDKE---SLCERANQLGQRLKNTLIDAKESVPAI--AAVRGLGSMIA  355 (421)
T ss_pred             --------------CC-CCCHHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHHHhCCCc--ceecccceEEE
Confidence                          11 11111222233455554333   4555666677777776654    3322  11122 23444


Q ss_pred             EEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHH
Q 037144          412 FRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAA  491 (502)
Q Consensus       412 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~  491 (502)
                      +.+.+...                    .... .....++.+.+.++|.++. +. -....++|+... ...++++|+++
T Consensus       356 ie~~~~~~--------------------~~~~-~~~~~~l~~~~~~~Gv~i~-~~-g~~~~~irl~P~-l~i~~~ei~~~  411 (421)
T PRK09792        356 AEFNDPQT--------------------GEPS-AAIAQKIQQRALAQGLLLL-TC-GAYGNVIRFLYP-LTIPDAQFDAA  411 (421)
T ss_pred             EEecCCcc--------------------CCcc-hHHHHHHHHHHHHCCcEEe-ec-CCCCCEEEEeCC-CcCCHHHHHHH
Confidence            55532210                    0000 1235678888888997542 21 111368999864 33567799999


Q ss_pred             HHHHHHHHH
Q 037144          492 WTVVQEHLE  500 (502)
Q Consensus       492 ~~~l~~~~~  500 (502)
                      ++.|.++++
T Consensus       412 ~~~l~~~l~  420 (421)
T PRK09792        412 MKILQDALS  420 (421)
T ss_pred             HHHHHHHHh
Confidence            999988764

>PRK06918 4-aminobutyrate aminotransferase; Reviewed

Probab=99.32  E-value=5.1e-09  Score=109.08  Aligned_cols=316  Identities=12%  Similarity=0.040  Sum_probs=164.0

Q ss_pred             HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144          116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV  195 (502)
Q Consensus       116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~  195 (502)
                      +.+.++.+.|.+++.-+..      ...+|++|||+|+..|+..||... .       +..+|-.....|-...-+..+.
T Consensus        97 ~~~~~la~~L~~~~p~~~~------~~v~f~~sGseA~e~AlklAr~~t-g-------r~~ii~~~~~yHG~t~~~ls~~  162 (451)
T PRK06918         97 EPYIELAEKLAALAPGSFD------KKVLFLNSGAEAVENAVKIARKYT-K-------RQGIISFSRGFHGRTLMTMTMT  162 (451)
T ss_pred             HHHHHHHHHHHHhCCCCCC------CEEEEcCCcHHHHHHHHHHHHHHh-C-------CCcEEEECCCcCccchhhhhhc
Confidence            4455677778888743211      157999999999999999998752 1       2223334444454333333322


Q ss_pred             CC--------C--CCCEEEEecCCC--CCcccC--------HHHHHHHHHHHHhcCCccEEEEEecCCccccccC----C
Q 037144          196 GI--------D--RKNIRAIKTTKS--SSYGLS--------AESVLSQINLDVEAELIPLFLCATVGTTAITAVD----P  251 (502)
Q Consensus       196 Gl--------g--~~~v~~v~~~~~--~~~~~d--------~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id----p  251 (502)
                      |-        +  ...+..+|....  ....+.        .+.+++.+.... .+..+.+|++.-.....|.+-    -
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~iAavi~EPi~g~gG~~~~~~~~  241 (451)
T PRK06918        163 SKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEV-APETIAAVVMEPVQGEGGFIVPSKKF  241 (451)
T ss_pred             CCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHhhc-CCCceEEEEECcccCCCCCccCCHHH
Confidence            21        0  112344443210  000111        223444332111 223355666654444446542    2


Q ss_pred             hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccc
Q 037144          252 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYL  331 (502)
Q Consensus       252 l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl  331 (502)
                      +++|.++|++||++++.|..+.++......+....-++ ..|.++  +.|.++..+..|+++.++. . .+.+...  ..
T Consensus       242 l~~l~~l~~~~gillI~DEV~tg~gr~g~~~a~~~~~v-~pDi~t--~sK~l~~G~pig~v~~~~~-i-~~~~~~~--~~  314 (451)
T PRK06918        242 VQEVRNICSEHGILFVADEIQTGFARTGKYFAIEHFDV-VPDLIT--VSKSLGAGVPISGVIGRKE-I-MDESAPG--EL  314 (451)
T ss_pred             HHHHHHHHHHcCCEEEEeccccCcCccCceehhHhcCC-CCCEEe--eehhhcCCCccEEEEEcHH-H-HhccCCC--Cc
Confidence            88999999999999999999977643221111001122 367554  5699987788899887533 2 2222111  00


Q ss_pred             cCccCCCCCcccccCCCcccccCCCCCCchHHHH---HHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEecC
Q 037144          332 KNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWV---VIRNFGVANLRNFIRSHVGMAKLFERLVTSD----KRFEVAFP  404 (502)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~---~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~----~~~~l~~~  404 (502)
                      ..                 ++ ++   ..+...+   ++..+..+.   ..++..++.+++.++|+++    |.+.-+ .
T Consensus       315 ~~-----------------T~-~g---~~l~~aaa~a~l~~i~~~~---~~~~~~~~g~~l~~~l~~l~~~~~~~~~v-r  369 (451)
T PRK06918        315 GG-----------------TY-AG---SPLGCAAALAVLDIIEKEN---LNDRAIELGKVVMNRFEEMKNKYNCIGDV-R  369 (451)
T ss_pred             Cc-----------------CC-Cc---CHHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHHHHhhCCCceee-c
Confidence            00                 00 11   2333333   444332333   3444555556666666543    322212 2


Q ss_pred             CCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCc
Q 037144          405 RNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTM  484 (502)
Q Consensus       405 ~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~  484 (502)
                      ....++.+.+..+...                 ...   .......+.+.+.++|..+.+...+  ..++|+++.. ..+
T Consensus       370 g~G~~~~~~~~~~~~~-----------------~~~---~~~~~~~l~~~~~~~Gvlv~~~~~~--~~~lrl~p~l-~~t  426 (451)
T PRK06918        370 GLGAMCAFELVQDRKT-----------------KEP---DKTLTANICKEANKRGLLLLSAGTY--GNVIRVLMPL-VIT  426 (451)
T ss_pred             cceeEEEEEEccCCCc-----------------CCC---cHHHHHHHHHHHHHCCeEEeecCCC--CCEEEEECCC-ccC
Confidence            2334445444211000                 000   0234567788888889765443222  2579998743 256


Q ss_pred             HHHHHHHHHHHHHHHHh
Q 037144          485 ESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       485 ~~di~~~~~~l~~~~~~  501 (502)
                      +++|+++++.|.+++++
T Consensus       427 ~~~id~~l~~l~~~l~~  443 (451)
T PRK06918        427 DEQLEEGLTIIEESLQA  443 (451)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            77999999999987754

>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=99.31  E-value=1.3e-10  Score=111.68  Aligned_cols=305  Identities=11%  Similarity=0.086  Sum_probs=188.5

Q ss_pred             HHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCC
Q 037144          120 IVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDR  199 (502)
Q Consensus       120 ~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~  199 (502)
                      .+.+.+++++|+++++         +-+-|-.++..++-+...           +++++++.+..+..+.++.++.--  
T Consensus       143 dlE~~iakF~G~E~ai---------vYs~gF~ti~S~ipafsK-----------rGDIi~~de~~nfaIq~GlqlSRS--  200 (467)
T KOG1358|consen  143 DLEKRIAKFMGTEDAI---------VYSYGFSTIESAIPAFSK-----------RGDIIFVDEAVNFAIQKGLQLSRS--  200 (467)
T ss_pred             ccHHHHHHhhCCccee---------eeccccchhhhcchhhhc-----------cCcEEEEehhhhHHHHHHHhhhhh--
Confidence            3345588999998753         333222223223333222           678999999999999998886655  


Q ss_pred             CCEEEEecCCCCCcccCHHHHHHHHHHHH----hcCCc---cEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccc
Q 037144          200 KNIRAIKTTKSSSYGLSAESVLSQINLDV----EAELI---PLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAY  272 (502)
Q Consensus       200 ~~v~~v~~~~~~~~~~d~~~Le~~i~~~~----~~g~~---p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~  272 (502)
                       .++....+       |.++||..+.+.+    +..++   ..+|++..-.-++|.+.|+.+|.++..||...+++|..+
T Consensus       201 -~i~~Fkhn-------dm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~pl~~iv~lk~Kyk~RvildEs~  272 (467)
T KOG1358|consen  201 -TISYFKHN-------DMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICPLPEIVKLKNKYKFRVILDESL  272 (467)
T ss_pred             -eeEEecCC-------CHHHHHHhccCcchhhhhccccccceEEEEEEeeccCCCcccccHHHHHHHhhheEEEEEeccc
Confidence             77777643       7778877765433    22221   346778788889999999999999999999999999988


Q ss_pred             ccccccCccch----hhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchh-hhhhhcCCcccccCccCCCCCcccccCC
Q 037144          273 AGSACICPEFR----HFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSC-LLSTLSTNPQYLKNEATDQEPKEQEVGY  347 (502)
Q Consensus       273 g~~~~~~~~~~----~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~-l~~~~~~~~~yl~~~~~~~~~~~~~~~~  347 (502)
                      ..+.+.. ..+    +.-.++..+|.++.+.--.+.   ..|.+++.+... ..+.++. ..|.++....          
T Consensus       273 SfG~lg~-~GrGvteH~~v~~~~iDiv~~sm~~ala---s~GgFc~G~~~i~~hQrLSg-~~Y~fSAslP----------  337 (467)
T KOG1358|consen  273 SFGVLGK-TGRGVTEHFGVPITDIDIVTASMETALA---SGGGFCAGKSFIADHQRLSG-SGYCFSASLP----------  337 (467)
T ss_pred             ccccccc-cCccccccCCCCccceeeeeeccccccc---ccCceeecceeeEeeeeccc-cceeeeccCc----------
Confidence            6665432 111    112235688999988665553   233333332211 1111111 1233321110          


Q ss_pred             CcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcc
Q 037144          348 KDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKY  427 (502)
Q Consensus       348 ~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~  427 (502)
                               +..+-++..++..+  ++-.++++........+.+.++...++++.+.+.++++-..+.+..         
T Consensus       338 ---------p~la~aa~~ai~i~--~~~p~~~~~L~~k~~~~H~~l~~~s~~~v~~~~~SPi~hl~l~~~~---------  397 (467)
T KOG1358|consen  338 ---------PYLAGAAIKAILIE--EWNPEIVQPLRAKVAKFHAALSSNSGFIVSGSPESPIIHLQLERSY---------  397 (467)
T ss_pred             ---------hhhhhhHHHHHHHH--hhCcchhhhhhccccccchhhhcCCceEEecCcCCceeeeeecccc---------
Confidence                     01112222333332  3334567777788888889998888899999999998887776532         


Q ss_pred             cCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC------CEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          428 KNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG------GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       428 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~------g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                                 .+.++...+-+++.++...++..........      -..-||+|+..- -++++|+++.+.|++.+..
T Consensus       398 -----------~s~e~e~~lL~eivd~~i~~~~ll~~a~~~~~~e~~~~~pSiri~~~a~-~seeel~ra~~~ik~~~~~  465 (467)
T KOG1358|consen  398 -----------GSREKEEKLLEEIVDKCIAEGVLLTRAKYLEKLERCPIPPSIRICVSAG-MSEEELERAAELIKEVASA  465 (467)
T ss_pred             -----------cchHHHHHHHHHHHHHHHhhcceehhhhhhhhcccCCCCCcEEEEEeCC-CCHHHHHHHHHHHHHHHHh
Confidence                       1223334455677777666665433222221      134799998644 5667999999999998764

>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.30  E-value=1.6e-08  Score=105.09  Aligned_cols=315  Identities=10%  Similarity=0.074  Sum_probs=171.0

Q ss_pred             HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcC
Q 037144          117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVG  196 (502)
Q Consensus       117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~G  196 (502)
                      ...++.+.|.++++-+-.       ..+|+++||+|+..|+..||.....+ +..+ +.-+|......|-...-+..+.|
T Consensus        98 ~~~~lAe~L~~~~p~~~~-------~v~f~~sGseAve~AlKlA~~~~~~r-g~~~-r~~Ii~~~~~yHG~t~gals~~~  168 (453)
T PRK06943         98 PAIELAERLAALTGGTLG-------HAFFASDGASAVEIALKMSFHAWRNR-GRGD-KREFVCLANGYHGETIGALGVTD  168 (453)
T ss_pred             HHHHHHHHHHHhCCCCCC-------EEEEeCCCHHHHHHHHHHHHHHHHHh-CCCC-CCEEEEECCCcCCCcHHhhcccC
Confidence            445567777777653211       57999999999999999998754322 1111 22344444445543322322222


Q ss_pred             CC---------CCCEEEEecCCCCC--c--------ccCHHHHHHHHHHHHhcCCccEEEEEec-CCccccccC----Ch
Q 037144          197 ID---------RKNIRAIKTTKSSS--Y--------GLSAESVLSQINLDVEAELIPLFLCATV-GTTAITAVD----PL  252 (502)
Q Consensus       197 lg---------~~~v~~v~~~~~~~--~--------~~d~~~Le~~i~~~~~~g~~p~~Vv~t~-gtt~~G~id----pl  252 (502)
                      -.         ...+..+|......  .        .-++++|++.+..   .+..+.+|++.- .....|.+-    =+
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~~~iAAviiEPvvqg~gG~~~~~~~yl  245 (453)
T PRK06943        169 VALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARALADVRRLFAE---RAGKIAALIVEPLVQCAAGMAMHDPSYL  245 (453)
T ss_pred             ChhhhcccccCCCCCEEECCCCccccccCCCHHHHHHHHHHHHHHHHHh---CCCceEEEEEeccccccCCcccCCHHHH
Confidence            10         01233444321000  0        0134677777753   223455666654 244456653    38


Q ss_pred             hHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-cceEEEeeCchhhhhhhcCCc---
Q 037144          253 KPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-DCCCLWVKDPSCLLSTLSTNP---  328 (502)
Q Consensus       253 ~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~~---  328 (502)
                      ++|.++|++||+.+++|..+.|+.....-+.....++ ..|.++++  |.++..+ +.|.++++++-  .+.+....   
T Consensus       246 ~~lr~lc~~~gillI~DEV~TG~GRtG~~fa~~~~gv-~PDivt~g--Kgl~gG~~Pi~av~~~~ei--~~~~~~~~~~~  320 (453)
T PRK06943        246 RGLRALCDRYGVHLIADEIAVGCGRTGTFFACEQAGV-WPDFLCLS--KGISGGYLPLSLVLSRDAI--FAAFYDDDVTR  320 (453)
T ss_pred             HHHHHHHHHcCCEEEeechhhCCCCCcchhHHHhCCC-CCCeEeee--hhhccCcccceEEEEcHHH--HHhhcccCccC
Confidence            9999999999999999999877643322121112244 58999985  8887663 68888876542  22332110   


Q ss_pred             ccccCccCCCCCcccccCCCcccccCCCCCCchHHHH---HHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCeEEe
Q 037144          329 QYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWV---VIRNFGVANLRNFIRSHVGMAKLFERLVTSD---KRFEVA  402 (502)
Q Consensus       329 ~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~---~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~---~~~~l~  402 (502)
                      .++..                    .+-...++.+.+   ++..+-++   +++++..++.++|.+.|+++   +.+.-+
T Consensus       321 ~~~~~--------------------~T~~gnpl~~aaa~a~L~~i~~~---~l~~~~~~~G~~l~~~L~~l~~~~~v~~v  377 (453)
T PRK06943        321 GFLHS--------------------HSYTGNPLACRAALATLDLFAED---DVLARNARKSARLRAALAPLAAHPQVRHL  377 (453)
T ss_pred             CccCC--------------------CCCCCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHhcCCCEEeE
Confidence            01000                    010113343333   34444332   45667777778888877654   333211


Q ss_pred             cCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCC
Q 037144          403 FPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSM  482 (502)
Q Consensus       403 ~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~  482 (502)
                       .-...++.+.+.....                    .   ...+..++.+.+.++|.++...    + ..+|++.. ..
T Consensus       378 -rG~Gl~~gvel~~~~~--------------------~---~~~~~~~i~~~~~~~Gll~~~~----g-~~l~~~Pp-l~  427 (453)
T PRK06943        378 -RQRGTIFAFDVALDGD--------------------A---ARTFSRRFFEAALERELLLRPI----G-TTVYLMPP-YV  427 (453)
T ss_pred             -eccccEEEEEEccCCC--------------------c---chHHHHHHHHHHHHCCcEEEec----C-CEEEEeCC-Cc
Confidence             0111233343331100                    0   0233567788888889754221    2 35898843 44


Q ss_pred             CcHHHHHHHHHHHHHHHHh
Q 037144          483 TMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       483 t~~~di~~~~~~l~~~~~~  501 (502)
                      .+++|||++++.|.+.+++
T Consensus       428 it~~eid~~~~~l~~al~~  446 (453)
T PRK06943        428 LDDDEIAWLAERTRATLDA  446 (453)
T ss_pred             CCHHHHHHHHHHHHHHHHH
Confidence            6778999999999887654

>PRK07481 hypothetical protein; Provisional

Probab=99.30  E-value=7.9e-09  Score=107.38  Aligned_cols=331  Identities=11%  Similarity=0.023  Sum_probs=171.5

Q ss_pred             HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144          116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV  195 (502)
Q Consensus       116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~  195 (502)
                      +.+.++.+.|.++++-+ ..     ...+|++|||+|+..|++.||..... .+..+ +..+|......|-...-+....
T Consensus        86 ~~~~~lae~L~~~~~~~-~~-----~~v~f~~sGsEAve~AlklAr~~~~~-~g~~~-r~~ii~~~~~yHG~t~ga~s~~  157 (449)
T PRK07481         86 PRAIELSYELIDMFAPE-GM-----RRVFFSSGGSDSVETALKLARQYWKV-RGQPE-RTKFISLKQGYHGTHFGGASVN  157 (449)
T ss_pred             HHHHHHHHHHHHhcCCC-CC-----CEEEEcCchHHHHHHHHHHHHHHHHh-cCCCC-CcEEEEECCCcCCcchhhhccC
Confidence            44556777788887421 11     25799999999999999999875321 12111 2234444444554332222222


Q ss_pred             CCC---------CCCEEEEecCCCC--Ccc-cCHHHHHHHHHHH----H--hcCCccEEEEEecCCccccccCC----hh
Q 037144          196 GID---------RKNIRAIKTTKSS--SYG-LSAESVLSQINLD----V--EAELIPLFLCATVGTTAITAVDP----LK  253 (502)
Q Consensus       196 Glg---------~~~v~~v~~~~~~--~~~-~d~~~Le~~i~~~----~--~~g~~p~~Vv~t~gtt~~G~idp----l~  253 (502)
                      |-.         ...+..++....-  .+. -|++.+++.+.+.    .  ..+..+.+|++.......|.+-|    ++
T Consensus       158 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~  237 (449)
T PRK07481        158 GNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWP  237 (449)
T ss_pred             CCcccccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHH
Confidence            110         0123334322100  011 2455544333211    1  12234667777765556677655    99


Q ss_pred             HHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-cceEEEeeCchhhhhhhcCCcc---
Q 037144          254 PLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-DCCCLWVKDPSCLLSTLSTNPQ---  329 (502)
Q Consensus       254 eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~~~---  329 (502)
                      +|.++|++||+.+++|..+.|+.....-+.....++ ..|.++++  |.++..+ +.|.+++++. . .+.+.....   
T Consensus       238 ~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~g--Kgl~gG~~Pi~av~~~~~-i-~~~~~~~~~~~~  312 (449)
T PRK07481        238 LVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGV-KPDIMCLA--KGITSGYVPLGATMVNAR-I-ADAFEANADFGG  312 (449)
T ss_pred             HHHHHHHHcCCEEEEeehhhCcCcCchhhHhhhcCC-CCCEEEEe--ecccCCCcCceEEEEcHH-H-HHHHhccCcccc
Confidence            999999999999999999877533221111111234 58988885  9887653 5788887654 2 233321110   


Q ss_pred             cccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEecCC--C
Q 037144          330 YLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK-RFEVAFPR--N  406 (502)
Q Consensus       330 yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~-~~~l~~~~--~  406 (502)
                      .+....               |. .+.+....+..++++.+.++   +..++..++.++|.+.|+++. ...++...  .
T Consensus       313 ~~~h~~---------------T~-~gnpl~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~  373 (449)
T PRK07481        313 AIMHGY---------------TY-SGHPVACAAALATLDIVVRE---DLPANAAKRGAYLLEGLQPLKERFELVGDVRGK  373 (449)
T ss_pred             ccccCC---------------CC-CCCHHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHhhcCCCeEEEeec
Confidence            000000               00 11122223333444444333   456667777888887776541 12222111  1


Q ss_pred             eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHH
Q 037144          407 FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMES  486 (502)
Q Consensus       407 ~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~  486 (502)
                      ..++.+.+.......                 ...+........+.+++.++|.++...    + ..+|++.. ...+++
T Consensus       374 Glm~gi~l~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~Gvl~~~~----g-~~i~l~Pp-l~it~~  430 (449)
T PRK07481        374 GLMLALDLVADKATR-----------------EPIDPSKGYANAVADVARENGVLVRPS----G-TKIILSPP-LVIQRE  430 (449)
T ss_pred             ceEEEEEeccccccc-----------------CCCCchhHHHHHHHHHHHhCCeEEEec----C-CEEEEECC-CCCCHH
Confidence            223444442210000                 000000233456778888889654222    2 24787742 335778


Q ss_pred             HHHHHHHHHHHHHHh
Q 037144          487 HVRAAWTVVQEHLEA  501 (502)
Q Consensus       487 di~~~~~~l~~~~~~  501 (502)
                      |||++++.+.+..++
T Consensus       431 eid~~~~~l~~~l~~  445 (449)
T PRK07481        431 DVDRIVDALDAGLSA  445 (449)
T ss_pred             HHHHHHHHHHHHHHh
Confidence            999999999988765

>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]

Probab=99.30  E-value=2e-09  Score=102.77  Aligned_cols=272  Identities=13%  Similarity=0.101  Sum_probs=169.5

Q ss_pred             cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcC-CchHHHHHHHHHHHHHHHHHhCccCCCCeEEE---eCCCCc
Q 037144          110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQG-TTCEALLCTLTAARDRVLKKIGRENISKLVVY---SSDQTH  185 (502)
Q Consensus       110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~-ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~---~s~~~H  185 (502)
                      ..--..++|.-+.+.--+.||+++..     .++-+++ +||-||+..-.+...           |..+|.   .++-.|
T Consensus        80 Gne~ID~iE~LCq~RALeaF~ldp~k-----WGVNVQp~SGSPANfavYtall~-----------Ph~RiMGLDLP~GGH  143 (477)
T KOG2467|consen   80 GNEYIDQIELLCQKRALEAFGLDPEK-----WGVNVQPYSGSPANFAVYTALLK-----------PHERIMGLDLPSGGH  143 (477)
T ss_pred             cchHHHHHHHHHHHHHHHHhCCCHHH-----CceeeccCCCCchhhHHHhhhcC-----------CCCeeeeccCCCCCc
Confidence            33456789998999999999997653     1444544 888999755443332           344443   344455


Q ss_pred             hhHHHH---HHHcCCCC-CCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHH
Q 037144          186 CAFQKA---AQIVGIDR-KNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQ  261 (502)
Q Consensus       186 ~s~~~a---a~~~Glg~-~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~  261 (502)
                      .|.--.   -++..... =+-....+|+ .+|-||-|.||+.-..-     +|.+++  +|++.....-|.+.+.+||.+
T Consensus       144 LsHGy~T~~kkISa~SiyFeSmPYkv~~-~TG~IDYD~Le~~A~~f-----rPk~ii--aG~SaY~R~~DYaR~R~Iad~  215 (477)
T KOG2467|consen  144 LSHGYQTPTKKISATSIYFESMPYKVDP-STGYIDYDKLEKTATLF-----RPKLII--AGTSAYSRLIDYARFRKIADK  215 (477)
T ss_pred             cccccccCCceeeeeeeecccCceeeCC-CCCceehHHHHHHHHhc-----CCcEEE--eccccchhhccHHHHHHHHHh
Confidence            442111   01111100 0011233454 36899999999875543     365554  356667777899999999999


Q ss_pred             hCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhh-cCCcccccCccCCCCC
Q 037144          262 FGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTL-STNPQYLKNEATDQEP  340 (502)
Q Consensus       262 ~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~-~~~~~yl~~~~~~~~~  340 (502)
                      .|+++.+|-||-.+.........   -++.+|.||...||.|-+|.+ |++++|..-.-...- .....|-         
T Consensus       216 ~gA~Lm~DMAHISgLVAA~vips---PFey~DiVTTTTHKsLRGPRg-~mIFyRkGvk~~~~k~g~~i~yd---------  282 (477)
T KOG2467|consen  216 VGAYLMADMAHISGLVAAGVIPS---PFEYCDIVTTTTHKSLRGPRG-AMIFYRKGVKSIKPKQGKEILYD---------  282 (477)
T ss_pred             cCceeehhhhhHHHHHhcccCCC---cccccceeeccccccccCCcc-eeEEEeccCCcCCCCCCCcceec---------
Confidence            99999999998655443222111   135899999999999999975 455555431100000 0011121         


Q ss_pred             cccccCCCc-ccccCCCCCCc-hHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-CCeeEEEEEeecC
Q 037144          341 KEQEVGYKD-WQITLCRRFRS-LKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP-RNFSLVCFRVTPS  417 (502)
Q Consensus       341 ~~~~~~~~~-~~~~~sr~~~a-l~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~-~~~~~v~f~~~~~  417 (502)
                      .+..+++.- -++|++-.... .++..+|+.-....+.+..++...+++.|.+.|.+. |++++.. ....+|.+.+.|.
T Consensus       283 lE~kINfaVFP~lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~~Nakala~~l~~~-Gy~lvtgGTDnHlvLvDLr~~  361 (477)
T KOG2467|consen  283 LEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKEYQKQVLKNAKALASALISR-GYKLVTGGTDNHLVLVDLRPK  361 (477)
T ss_pred             hhhhhhhhccccccCCCCcchHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHc-CceEecCCccceEEEEecccc
Confidence            112333322 25666655444 466678888778889999999999999999999998 8999853 3345777888776


Q ss_pred             cc
Q 037144          418 AV  419 (502)
Q Consensus       418 ~~  419 (502)
                      ++
T Consensus       362 G~  363 (477)
T KOG2467|consen  362 GV  363 (477)
T ss_pred             CC
Confidence            64

>PRK07036 hypothetical protein; Provisional

Probab=99.30  E-value=7.5e-09  Score=107.90  Aligned_cols=325  Identities=10%  Similarity=0.074  Sum_probs=172.3

Q ss_pred             HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH
Q 037144          115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI  194 (502)
Q Consensus       115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~  194 (502)
                      .+.+.++.+.|.+++.-+.       ...+|++|||+|+..|++.||.....+ +..+ +..+|......|-...-+..+
T Consensus        94 ~~~~~~lae~L~~~~p~~~-------~~v~f~~sGseAve~AlklAr~~~~~~-g~t~-r~~Ii~~~~~YHG~t~~a~s~  164 (466)
T PRK07036         94 NAPAAELAAKLAELAPGDL-------NHVFLTTGGSTAVDSALRFVHYYFNVR-GRPA-KKHIITRGDAYHGSTYLTASL  164 (466)
T ss_pred             CHHHHHHHHHHHHhCCCCc-------CEEEEeCCchHHHHHHHHHHHHHHHhc-CCCC-ccEEEEEcCccCCccHhhhcc
Confidence            3445567777777753211       258999999999999999998753221 1111 223344444455443333333


Q ss_pred             cCCCC---------CCEEEEecCCC--CCcccC--------HHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----
Q 037144          195 VGIDR---------KNIRAIKTTKS--SSYGLS--------AESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----  251 (502)
Q Consensus       195 ~Glg~---------~~v~~v~~~~~--~~~~~d--------~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----  251 (502)
                      .|...         ..+..+|....  ....+.        ++.+++.+..  ..+..+.+|++.......|.+-|    
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~iAavi~EPv~g~gG~~~p~~~y  242 (466)
T PRK07036        165 TGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILS--LGADNIAAFIAEPILGSGGVIVPPPGY  242 (466)
T ss_pred             cCCCcccccccCCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHH--cCCCceEEEEEeCCcCCCCCccCCHHH
Confidence            22210         12444443210  001111        2345555542  12234667777776666788766    


Q ss_pred             hhHHHHHHHHhCCEEEeecccccccccCccchhh-hcCCCCCCeeEEccCCcCCCCC-cceEEEeeCchhhhhhhcCC--
Q 037144          252 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF-IDGVECVDSFSFNPHKWLFTTL-DCCCLWVKDPSCLLSTLSTN--  327 (502)
Q Consensus       252 l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~-~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~--  327 (502)
                      +++|.++|++||+.+++|.++.|+-....-+... .-++ ..|.++++  |.++..+ +.|.+++++. . .+.+...  
T Consensus       243 l~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv-~PDivt~g--K~l~gG~~Pi~av~~~~~-i-~~~~~~~~~  317 (466)
T PRK07036        243 HARMREICRRYDILYISDEVVTGFGRLGHFFASEAVFGI-QPDIITFA--KGLTSGYQPLGAVIISER-L-LDVISGPNA  317 (466)
T ss_pred             HHHHHHHHHHcCCEEEEeechhCCCcCchhhhhhhhcCC-CCCEEEEc--cccccCccccEEEEEcHH-H-HHHHhcccC
Confidence            9999999999999999999987653322111110 1133 57888875  9887653 5788887644 2 2333211  


Q ss_pred             c--ccccCccCCCCCcccccCCCcccccCCCCCCchHHHH---HHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144          328 P--QYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWV---VIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA  402 (502)
Q Consensus       328 ~--~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~---~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~  402 (502)
                      +  .|...                .|.    ...++.+.+   +++.+..   .++.++..++.++|++.|+++....++
T Consensus       318 ~~~~~~~~----------------~T~----~gnpl~~aaa~a~Le~i~~---~~l~~~~~~~g~~l~~~L~~l~~~~~v  374 (466)
T PRK07036        318 KGNVFTHG----------------FTY----SGHPVACAAALKNIEIMER---EGLCEHVREVGPYFEERLASLRELPLV  374 (466)
T ss_pred             cCcccccC----------------CCC----CCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHhccCCCE
Confidence            0  01110                011    113333333   3444322   346677888888888888654222222


Q ss_pred             cCC--CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecC
Q 037144          403 FPR--NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGN  480 (502)
Q Consensus       403 ~~~--~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~  480 (502)
                      ...  ...++.+.+.......                 ............+.+.+.++|.+.. +.   + ..+|++.. 
T Consensus       375 ~~vrG~Gl~~~ve~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~Gvl~~-~~---~-~~~~l~Pp-  431 (466)
T PRK07036        375 GDVRGDHLMACVECVADKGSK-----------------ALLPEDIAIGQRIDRHCQERGLLVR-PL---E-HLCVLSPP-  431 (466)
T ss_pred             EEEEeeceEEEEEEccCcccc-----------------CCCCchhHHHHHHHHHHHHCCcEEe-ec---C-CEEEEeCC-
Confidence            111  1223444443211000                 0000002345567788888897542 21   2 36787642 


Q ss_pred             CCCcHHHHHHHHHHHHHHHHh
Q 037144          481 SMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       481 ~~t~~~di~~~~~~l~~~~~~  501 (502)
                      ...+++|||++++.+.++.++
T Consensus       432 l~it~~~id~~~~~l~~al~~  452 (466)
T PRK07036        432 LIITRAQIDEIVAILRAAIEE  452 (466)
T ss_pred             CcCCHHHHHHHHHHHHHHHHH
Confidence            345778999999999877653

>PRK07482 hypothetical protein; Provisional

Probab=99.29  E-value=1.3e-08  Score=106.07  Aligned_cols=332  Identities=9%  Similarity=0.002  Sum_probs=172.3

Q ss_pred             HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEE-eCCCCchhHHHHHH
Q 037144          115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVY-SSDQTHCAFQKAAQ  193 (502)
Q Consensus       115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~-~s~~~H~s~~~aa~  193 (502)
                      ++.+.++.+.|.+++.-+-       ...+|++|||+|+..|++.||.....+ +..  ++..|+ .....|-...-+..
T Consensus        93 ~~~~~~lAe~L~~~~p~~~-------~~v~f~~sGSEAve~AlKlAr~~~~~~-g~~--~r~~Ii~~~~~YHG~t~ga~s  162 (461)
T PRK07482         93 TEASITLSKRIIDRAPAGM-------SKVYYGLSGSDANETQIKLVWYYNNVL-GRP--EKKKIISRWRGYHGSGVVTGS  162 (461)
T ss_pred             CHHHHHHHHHHHHhCCCCc-------CEEEEeCchHHHHHHHHHHHHHHHHhc-CCC--CCceEEEecCccCCccHhhhh
Confidence            4455667777888763211       257899999999999999998753221 211  133343 34444542221222


Q ss_pred             Hc---------CCCCCCEEEEecCCCCCc-----------ccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC--
Q 037144          194 IV---------GIDRKNIRAIKTTKSSSY-----------GLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP--  251 (502)
Q Consensus       194 ~~---------Glg~~~v~~v~~~~~~~~-----------~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp--  251 (502)
                      +.         +.....+..+|.....+.           .-++++|++.+...  .+..+.+|++.-.....|.+-|  
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~iAAvi~EPvqg~gG~~~~~~  240 (461)
T PRK07482        163 LTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEELILAE--GPDTIAAFIAEPVLGTGGIVPPPA  240 (461)
T ss_pred             ccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHHHHHHHHHHHHHHHhc--CCCcEEEEEECCccCCCCCcCCCH
Confidence            21         111123344433210000           01456777777432  1233556666654444566632  


Q ss_pred             --hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-cceEEEeeCchhhhhhhcCCc
Q 037144          252 --LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-DCCCLWVKDPSCLLSTLSTNP  328 (502)
Q Consensus       252 --l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~~  328 (502)
                        +++|.++|++||+.+++|..+.|+.....-+.....++ ..|.++++  |.++..+ +.|.++++++ . .+.+....
T Consensus       241 ~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~g--Kgl~gG~~Pi~av~~~~~-i-~~~~~~~~  315 (461)
T PRK07482        241 GYWPAIQAVLKKYDILLIADEVVTGFGRLGSMFGSDHYGI-EPDLITVA--KGLTSAYAPLSGSIVGEK-V-WDVLEQGS  315 (461)
T ss_pred             HHHHHHHHHHHHhCCEEEEeccccCCCcCcchhhHHhcCC-CCCEEEEc--cccccCccccceeeecHH-H-HHHHhccc
Confidence              88999999999999999999877644332222222344 68999975  9987664 5777777644 2 22332111


Q ss_pred             ccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEecC
Q 037144          329 QYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTS----DKRFEVAFP  404 (502)
Q Consensus       329 ~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~----~~~~~l~~~  404 (502)
                      ....           .+ ....|. .+.+..+.+..++++.+-++   ++.++..++.++|.+.|++    .|.+.-+ .
T Consensus       316 ~~~~-----------~~-~h~~T~-~gnpl~~Aaa~a~L~~~~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~v~~v-r  378 (461)
T PRK07482        316 DEHG-----------AI-GHGWTY-SGHPICAAAALANLDILERE---NLVGNAAEVGAYFRARLRAAFGDHPLVGEV-R  378 (461)
T ss_pred             ccCC-----------cc-ccCCCC-CcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHhcCCCEEEE-e
Confidence            0000           00 000011 11122223334445444333   3455666777777777754    3322111 1


Q ss_pred             CCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCc
Q 037144          405 RNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTM  484 (502)
Q Consensus       405 ~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~  484 (502)
                      -...++.+.+.......                 ...........++.+.+.++|.+. ....  +...+|+... ...+
T Consensus       379 G~Glm~giel~~~~~~~-----------------~~~~~~~~~~~~i~~~~~~~Gvl~-~~~~--~~~~i~~~Pp-l~it  437 (461)
T PRK07482        379 GVGMLAAVEFVADRDDR-----------------TPFDPALKIGPQVSAAALERGVIA-RAMP--HGDILGFAPP-LVLT  437 (461)
T ss_pred             eceeEEEEEeccCCCcC-----------------CCCChhhHHHHHHHHHHHHCCcEE-ecCC--CCCEEEEeCC-CCCC
Confidence            11223344443211000                 000000123467888888889653 2211  1257888753 4567


Q ss_pred             HHHHHHHHHHHHHHHHh
Q 037144          485 ESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       485 ~~di~~~~~~l~~~~~~  501 (502)
                      ++||+++++.+.+..++
T Consensus       438 ~~ei~~~~~~l~~~l~~  454 (461)
T PRK07482        438 RAEADEIVAIAKDAVDE  454 (461)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            88999999999887653

>PRK06149 hypothetical protein; Provisional

Probab=99.29  E-value=7.4e-09  Score=117.20  Aligned_cols=319  Identities=8%  Similarity=-0.012  Sum_probs=175.3

Q ss_pred             HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcC
Q 037144          117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVG  196 (502)
Q Consensus       117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~G  196 (502)
                      ...++.+.|++++.-+.       ...+|++|||+||..|+..||...    |    ++.+|......|-...-+..+.+
T Consensus       625 ~~~elae~L~~~~p~~~-------~~v~f~~SGsEA~e~AlklAr~~t----g----r~~ii~~~~~yHG~t~ga~~~s~  689 (972)
T PRK06149        625 AVAEFSERLAALAPDGL-------DTVFLVNSGSEANDLAIRLAWAAS----G----RRDVVSVLEAYHGWTVATDAVST  689 (972)
T ss_pred             HHHHHHHHHHHhCCCCc-------CEEEEeCCchHHHHHHHHHHHHhc----C----CCeEEEEeCCCCCcChhHhhhcC
Confidence            44456666777762111       157999999999999999998752    1    23445555555632222211111


Q ss_pred             ----------CCCCCEEEEecCCC--CCcc-cC-----HHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhH
Q 037144          197 ----------IDRKNIRAIKTTKS--SSYG-LS-----AESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKP  254 (502)
Q Consensus       197 ----------lg~~~v~~v~~~~~--~~~~-~d-----~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~e  254 (502)
                                .....+..++....  ..+. .+     .+++++.++.....+..+.+|++.......|.+-|    +++
T Consensus       690 ~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~  769 (972)
T PRK06149        690 SIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQ  769 (972)
T ss_pred             CccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHH
Confidence                      00112344433210  0111 12     35666666554444455667777666666788888    999


Q ss_pred             HHHHHHHhCCEEEeecccccccccCccc-hhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccC
Q 037144          255 LCDVAKQFGIWVHVDAAYAGSACICPEF-RHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKN  333 (502)
Q Consensus       255 I~~i~~~~g~~lhVDaA~g~~~~~~~~~-~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~  333 (502)
                      |.++|++||+.+++|.++.|+......+ ..-..|+ ..|.+|+  .|.++..+..|.+++++. . .+.+... .++.+
T Consensus       770 l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv-~PDivt~--gK~lg~G~Pl~av~~~~~-i-~~~~~~~-~~~~s  843 (972)
T PRK06149        770 VYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGV-VPDIITM--AKGMGNGHPLGAVITRRE-I-AEALEAE-GYFFS  843 (972)
T ss_pred             HHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCC-CCCEEEe--cccccCCeeeEEEEEcHH-H-HhhhccC-CcccC
Confidence            9999999999999999996653322211 1111244 5898877  499886677888888654 2 2333221 12211


Q ss_pred             ccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEecCCCeeE
Q 037144          334 EATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD----KRFEVAFPRNFSL  409 (502)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~----~~~~l~~~~~~~~  409 (502)
                      .                 . ++.+..+....+++..+-.+   ++.++..++.++|+++|+++    |-+..+. -...+
T Consensus       844 T-----------------~-~gnP~~~aaala~L~~i~~e---~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vr-G~Gl~  901 (972)
T PRK06149        844 S-----------------T-GGSPVSCRIGMAVLDVLREE---KLQENARRVGDHLKARLEALADRHPLIGAVH-GMGLY  901 (972)
T ss_pred             C-----------------C-CCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHhCCCeEEEe-ecceE
Confidence            0                 0 12122223333444444333   45666777777887777653    2221111 11223


Q ss_pred             EEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHH
Q 037144          410 VCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVR  489 (502)
Q Consensus       410 v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~  489 (502)
                      +.+.+.....                    ..+...+....+.+++.++|.++ .+.. ....+||+... ...++++||
T Consensus       902 ~gvel~~~~~--------------------~~~~~~~~~~~i~~~l~~~Gvl~-~~~g-~~~~vl~~~Pp-l~it~~~id  958 (972)
T PRK06149        902 LGVELVRDRQ--------------------TLEPATEETAAICDRLLELGVIM-QPTG-DHLNILKIKPP-LCLDRESAD  958 (972)
T ss_pred             EEEEEecCcc--------------------cCCCChHHHHHHHHHHHhCCeEE-eecC-CCCCEEEEECC-CcCCHHHHH
Confidence            3444432100                    00000223467788888889654 3321 11357888753 346778999


Q ss_pred             HHHHHHHHHHHh
Q 037144          490 AAWTVVQEHLEA  501 (502)
Q Consensus       490 ~~~~~l~~~~~~  501 (502)
                      .++++|.+++.+
T Consensus       959 ~~~~~l~~~l~~  970 (972)
T PRK06149        959 FFVDMLDRVLTE  970 (972)
T ss_pred             HHHHHHHHHHHh
Confidence            999999988754

>PRK07480 putative aminotransferase; Validated

Probab=99.29  E-value=9.4e-09  Score=106.88  Aligned_cols=327  Identities=11%  Similarity=0.010  Sum_probs=166.8

Q ss_pred             HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCe-EEEeCCCCchhHHHHHHH
Q 037144          116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKL-VVYSSDQTHCAFQKAAQI  194 (502)
Q Consensus       116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~-~v~~s~~~H~s~~~aa~~  194 (502)
                      ..+.++.+.|.+++.-+.       ...+|++|||+|+..|+..||.....+ |..  ++. +|......|-...-+...
T Consensus        94 ~~~~~lae~L~~~~p~~~-------~~v~f~~SGseA~e~AlklAr~~~~~~-g~~--~r~~ii~~~~~yHG~tl~a~s~  163 (456)
T PRK07480         94 PPAIELAAKLAEVAPPGF-------NHVFFTNSGSEANDTVLRMVRHYWALK-GKP--QKKVIISRKNGYHGSTVAGASL  163 (456)
T ss_pred             HHHHHHHHHHHHhCCCCc-------CEEEEeCCcHHHHHHHHHHHHHHHHhc-CCC--CCcEEEEECCCcCCcchhhhhc
Confidence            445556777778764221       157999999999999999998753221 111  233 333344445433222222


Q ss_pred             cCC-------C--CCCEEEEecCCC--CCcccC--------HHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----
Q 037144          195 VGI-------D--RKNIRAIKTTKS--SSYGLS--------AESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----  251 (502)
Q Consensus       195 ~Gl-------g--~~~v~~v~~~~~--~~~~~d--------~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----  251 (502)
                      .|.       |  ...+..++....  .....+        ++.|++.+.+.  .+..+.+|++.......|.+-|    
T Consensus       164 ~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~vAAvi~EPiqg~gG~~~~~~~y  241 (456)
T PRK07480        164 GGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILEL--GADNVAAFIGEPIQGAGGVIIPPATY  241 (456)
T ss_pred             cCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHHhc--CCCcEEEEEEccccCCCCCccCCHHH
Confidence            221       0  112333332110  000011        25555555331  1234556666655555677766    


Q ss_pred             hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-cceEEEeeCchhhhhhhcCCccc
Q 037144          252 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-DCCCLWVKDPSCLLSTLSTNPQY  330 (502)
Q Consensus       252 l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~~~y  330 (502)
                      +++|.++|++||+.+++|.++.|+.-...-+.....++ ..|.++++  |.++..+ +.|.++.++. . .+.+......
T Consensus       242 l~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~g--K~l~gG~~Pi~av~~~~~-i-~~~~~~~~~~  316 (456)
T PRK07480        242 WPEIQRICRKYDILLVADEVICGFGRTGEWFGSQHFGI-KPDLMTIA--KGLTSGYIPMGAVGVGDR-V-AEVLIEEGGE  316 (456)
T ss_pred             HHHHHHHHHHcCCEEEEechhhCCCcCcchhhhhhcCC-CCCeeeee--hhhccCCccceEEEEcHH-H-HHHHhcCCCC
Confidence            99999999999999999999876533222111111244 57888774  9887653 5777777544 2 2333111111


Q ss_pred             ccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHH-HHHHHHHHHHHhcCCCeEEecCC--Ce
Q 037144          331 LKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSH-VGMAKLFERLVTSDKRFEVAFPR--NF  407 (502)
Q Consensus       331 l~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~-~~la~~l~~~l~~~~~~~l~~~~--~~  407 (502)
                      +....               |. .+.+..+.+..++|+.+-.++   +.++. .++.++|.+.|+++....++...  ..
T Consensus       317 ~~~~~---------------T~-~gnpl~~Aaa~a~L~~l~~~~---l~~~~~~~~g~~l~~~l~~l~~~~~i~~vrG~G  377 (456)
T PRK07480        317 FNHGF---------------TY-SGHPVAAAVALANLRILRDEG---IVERVRDDTGPYLQKRLRELADHPLVGEVRGVG  377 (456)
T ss_pred             cccCC---------------CC-CcCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHhhcCCCeeeEEeec
Confidence            11000               11 111222334444555543333   44555 36666776666553222222111  12


Q ss_pred             eEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHH
Q 037144          408 SLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESH  487 (502)
Q Consensus       408 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~d  487 (502)
                      .++.+.+......           .      ............+.+.+.++|.+. .+   .+ ..+|++.. ...+++|
T Consensus       378 lm~gie~~~~~~~-----------~------~~~~~~~~~~~~~~~~~~~~Gll~-~~---~~-~~l~~~Pp-l~it~~e  434 (456)
T PRK07480        378 LVGAIELVKDKAT-----------R------ERFEAGGGVGTICRDHCFANGLIM-RA---VG-DRMIISPP-LVITHAE  434 (456)
T ss_pred             ceEEEEEeccccc-----------c------ccCcchhhHHHHHHHHHHHCCcEE-ee---cC-CEEEEECC-CCCCHHH
Confidence            2334444221100           0      000000123356777888889754 22   12 46888753 4457889


Q ss_pred             HHHHHHHHHHHHHh
Q 037144          488 VRAAWTVVQEHLEA  501 (502)
Q Consensus       488 i~~~~~~l~~~~~~  501 (502)
                      ||++++.|.++.++
T Consensus       435 id~~~~~l~~al~~  448 (456)
T PRK07480        435 IDELVEKARKALDA  448 (456)
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999887653

>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases

Probab=99.29  E-value=1.2e-08  Score=105.94  Aligned_cols=326  Identities=11%  Similarity=0.031  Sum_probs=170.4

Q ss_pred             HHHHHHHHHHHHHhcCCCC-ccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHH
Q 037144          115 VELENIVMDWLGQMLDLPK-SFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQ  193 (502)
Q Consensus       115 ~~le~~~~~~l~~l~g~~~-~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~  193 (502)
                      ++...++.+.|.+++.-.. ..     ...++++|||+|+..|++.||...    +    +..+|......|-...-+..
T Consensus        81 ~~~~~~lae~L~~~~p~~~~~~-----~~~f~~~sGsEA~e~AlklAr~~t----g----r~~Ii~~~~~yHG~t~~~~s  147 (442)
T TIGR00709        81 TPLKDAFIEALLNIIPKRKMDY-----KLQFPGPSGADAVEAAIKLAKTYT----G----RTNVISFSGGFHGMTIGALA  147 (442)
T ss_pred             cHHHHHHHHHHHHhCCCcCCCc-----cEEEeCCCHHHHHHHHHHHHHHhc----C----CCeEEEEcCCcCCchHHHHh
Confidence            3455567778888874321 11     024556899999999999999752    1    22344445555654444444


Q ss_pred             HcCC---------CCCCEEEEecCCCCCccc--------CHHH----HHHHHHHHHhcCCccEEEEEecCCcccccc---
Q 037144          194 IVGI---------DRKNIRAIKTTKSSSYGL--------SAES----VLSQINLDVEAELIPLFLCATVGTTAITAV---  249 (502)
Q Consensus       194 ~~Gl---------g~~~v~~v~~~~~~~~~~--------d~~~----Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i---  249 (502)
                      +.|.         ....+..+|...  ..+.        +.+.    +++.+.........+.+|++.......|.+   
T Consensus       148 ~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~  225 (442)
T TIGR00709       148 VTGNLFAKNAVGMLMPGVQFMPYPH--EYRCPFGIGGEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAP  225 (442)
T ss_pred             hcCChhhhccCCCCCCCcEEeCCCc--cccccccCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCC
Confidence            4331         011244444321  1111        2223    333332111111234556665555555655   


Q ss_pred             -CChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCc
Q 037144          250 -DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNP  328 (502)
Q Consensus       250 -dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~  328 (502)
                       +-+++|.++|++||++++.|..+.|+.....-+.....++ ..|.+++  .|.++..+..|.++.++.  . +.+.  .
T Consensus       226 ~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gK~l~~G~Pigav~~~~~--~-~~~~--~  297 (442)
T TIGR00709       226 SEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMFAFEHAGI-EPDFVVM--SKAVGGGLPLAVLLIAPE--F-DAWQ--P  297 (442)
T ss_pred             HHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHHcCC-CCcEEEE--cccccCCcccEEEEEchH--H-hccC--C
Confidence             2389999999999999999999987644322111111233 5788885  599877778899888654  2 2221  1


Q ss_pred             ccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEecCC--
Q 037144          329 QYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD-KRFEVAFPR--  405 (502)
Q Consensus       329 ~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~-~~~~l~~~~--  405 (502)
                      .....                 |+ .+.+....+..++++.+..+   .+.++..++.++|.+.|+++ ....++...  
T Consensus       298 ~~~~~-----------------T~-~gnpla~aaa~a~L~~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG  356 (442)
T TIGR00709       298 AGHTG-----------------TF-RGNQLAMVTGTEALNYWKDD---NLAQNAQERGERITSFLDDMIKEHPCIGNVRG  356 (442)
T ss_pred             CcCCC-----------------CC-CcCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHhCCCeeeeec
Confidence            11100                 10 11122223333444444333   45567777788888877653 122222221  


Q ss_pred             CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcH
Q 037144          406 NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTME  485 (502)
Q Consensus       406 ~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~  485 (502)
                      ...++.+.+......       ++  .    ......+ ......+...+.++|.++ .+... ...++|+... ...++
T Consensus       357 ~Gl~~~ie~~~~~~~-------~~--~----~~~~~~~-~~~~~~~~~~~~~~Gvl~-~~~~~-~~~~l~~~Pp-l~it~  419 (442)
T TIGR00709       357 RGLMQGIMIVDERQS-------KD--A----TGAYPRD-CELAAAIQGACFENGLLL-ETGGR-EGEVFRLLCP-ITIDQ  419 (442)
T ss_pred             cceEEEEEEccCccc-------cc--c----cccCCcc-hHHHHHHHHHHHHCCeEE-eecCC-CCCEEEEECC-CCCCH
Confidence            223444544321100       00  0    0000000 123456777788888643 32211 2357898864 55677


Q ss_pred             HHHHHHHHHHHHHHHh
Q 037144          486 SHVRAAWTVVQEHLEA  501 (502)
Q Consensus       486 ~di~~~~~~l~~~~~~  501 (502)
                      ++|+++++++.+..++
T Consensus       420 ~ei~~~~~~l~~~l~~  435 (442)
T TIGR00709       420 EECEEGISRFKQAVEE  435 (442)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            8999999999887653

This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.

>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated

Probab=99.28  E-value=4.2e-09  Score=108.48  Aligned_cols=315  Identities=10%  Similarity=-0.009  Sum_probs=168.1

Q ss_pred             HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144          116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV  195 (502)
Q Consensus       116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~  195 (502)
                      +...++.+.|.++++-+.+       ..+|+++||+|+..|+..||.....+ +. + +.-+|......|-...-+..+.
T Consensus        86 ~~~~~la~~L~~~~p~~~~-------~v~f~~SGsEAve~AlklAr~~~~~~-g~-~-r~kii~~~~~yHG~t~~a~s~~  155 (428)
T PRK07986         86 PPAIELCRKLVAMTPQPLE-------CVFLADSGSVAVEVAMKMALQYWQAK-GE-P-RQRFLTLRHGYHGDTFGAMSVC  155 (428)
T ss_pred             HHHHHHHHHHHhhCCCCcC-------EEEEeCCcHHHHHHHHHHHHHHHHhc-CC-C-CcEEEEECCCcCCCcHhhhccc
Confidence            3455677778887642211       57999999999999999998753211 11 1 2224444444554332222222


Q ss_pred             CCC----------CCCEEEEecCCCC---Cc-ccCHHHHHHHHHHHHhcCCccEEEEEecC-Ccccccc----CChhHHH
Q 037144          196 GID----------RKNIRAIKTTKSS---SY-GLSAESVLSQINLDVEAELIPLFLCATVG-TTAITAV----DPLKPLC  256 (502)
Q Consensus       196 Glg----------~~~v~~v~~~~~~---~~-~~d~~~Le~~i~~~~~~g~~p~~Vv~t~g-tt~~G~i----dpl~eI~  256 (502)
                      |-.          ...+..+|.....   .+ .-|++++++.++..   +....+|++... ....|.+    +.+++|.
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~---~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~  232 (428)
T PRK07986        156 DPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAAH---RHEIAAVILEPIVQGAGGMRIYHPEWLKRVR  232 (428)
T ss_pred             CCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHhC---CCcEEEEEEechhcCcCCcccCCHHHHHHHH
Confidence            210          0123344432100   00 23667888888532   223445555432 3334443    3499999


Q ss_pred             HHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCc-ccccCc
Q 037144          257 DVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNP-QYLKNE  334 (502)
Q Consensus       257 ~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~-~yl~~~  334 (502)
                      ++|++||+++++|.++.|+.....-+.....++ ..|.+++  .|.++.. ..+|.++.++.  +.+.+.... ..+...
T Consensus       233 ~lc~~~g~lLI~DEv~tG~GrtG~~fa~~~~gv-~PDi~t~--gK~l~gG~~p~~av~~~~~--i~~~~~~~~~~~~~~~  307 (428)
T PRK07986        233 KLCDREGILLIADEIATGFGRTGKLFACEHAGI-APDILCL--GKALTGGTMTLSATLTTRE--VAETISNGEAGCFMHG  307 (428)
T ss_pred             HHHHHcCCEEEEeccccCCccCCCeeeecccCC-CCCEEEe--chhhhCCcccCcchhchHH--HHHHhhcCCCCccccC
Confidence            999999999999999866422211111111233 4688875  6888655 35677666543  223332111 000000


Q ss_pred             cCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC--CeeEEEE
Q 037144          335 ATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR--NFSLVCF  412 (502)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~--~~~~v~f  412 (502)
                                     .|.. +.+..+.+..++++.+-.+   ++.++..++.++|++.|+++.....+...  ...++.+
T Consensus       308 ---------------~T~~-g~p~~~aaa~a~L~~i~~~---~~~~~~~~~g~~l~~~l~~l~~~~~i~~vRg~Gl~~~v  368 (428)
T PRK07986        308 ---------------PTFM-GNPLACAVANASLSLLESG---DWQQQVAAIEAQLREELAPLRDAPMVADVRVLGAIGVV  368 (428)
T ss_pred             ---------------CCCC-cCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHhcCCCEEeEeccceEEEE
Confidence                           0111 2122333444555555333   35677788888888888764222222111  1223333


Q ss_pred             EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHH
Q 037144          413 RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAW  492 (502)
Q Consensus       413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~  492 (502)
                      .+..+.                            ....+.+.+.++|.++ .+.   | .++|++.. ...++++|++++
T Consensus       369 e~~~~~----------------------------~~~~~~~~l~~~Gl~~-~~~---g-~~i~~~Pp-l~it~~ei~~~~  414 (428)
T PRK07986        369 ETTRPV----------------------------NMAALQRFFVEQGVWI-RPF---G-KLIYLMPP-YIILPEQLQRLT  414 (428)
T ss_pred             EeCCcc----------------------------cHHHHHHHHHHCCcEE-Eec---C-CEEEEeCC-CCCCHHHHHHHH
Confidence            332210                            1346777888889754 221   2 47999753 457788999999


Q ss_pred             HHHHHHHHh
Q 037144          493 TVVQEHLEA  501 (502)
Q Consensus       493 ~~l~~~~~~  501 (502)
                      +.|.+..++
T Consensus       415 ~~l~~~l~~  423 (428)
T PRK07986        415 AAVNRAVQD  423 (428)
T ss_pred             HHHHHHHhh
Confidence            999887653

>PRK06082 4-aminobutyrate aminotransferase; Provisional

Probab=99.27  E-value=1.7e-08  Score=104.98  Aligned_cols=315  Identities=14%  Similarity=0.054  Sum_probs=170.2

Q ss_pred             HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH
Q 037144          115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI  194 (502)
Q Consensus       115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~  194 (502)
                      ++.+.++.+.|+++++...+       ..+|++|||+|+..|+..||...    +    +..+|......|-...-+..+
T Consensus       112 ~~~~~~lae~L~~~~p~~~~-------~v~f~~sGseAve~AlklAr~~t----g----r~~ii~~~~~yHG~t~~a~s~  176 (459)
T PRK06082        112 NETAIECAEKLTEIAGGELN-------RVLFAPGGTSAIGMALKLARHIT----G----NFKVVSLWDSFHGASLDAISV  176 (459)
T ss_pred             CHHHHHHHHHHHHhCCCCCC-------EEEECCCcHHHHHHHHHHHHHhc----C----CCEEEEEeCCCcCccHHHHhh
Confidence            45566677778888753212       57999999999999999998651    1    223444455556554444433


Q ss_pred             cCCC---------CCCEEEEecCCCCC--c-cc------CHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hh
Q 037144          195 VGID---------RKNIRAIKTTKSSS--Y-GL------SAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LK  253 (502)
Q Consensus       195 ~Glg---------~~~v~~v~~~~~~~--~-~~------d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~  253 (502)
                      .|-.         ...+..+|....-.  + ..      +++.|++.++.   .+ ...+|++.......+.+-|   ++
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~---~~-~vAavIvEPv~g~g~~~~~~~yl~  252 (459)
T PRK06082        177 GGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEK---EG-GIGAFIAEAVRNTDVQVPSKAYWK  252 (459)
T ss_pred             cCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhc---CC-CEEEEEECCccCCCCcCCCHHHHH
Confidence            3320         01234444221000  0 01      13557776653   12 3455666543333233444   99


Q ss_pred             HHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-cceEEEeeCchhhhhhhcCCccccc
Q 037144          254 PLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-DCCCLWVKDPSCLLSTLSTNPQYLK  332 (502)
Q Consensus       254 eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~~~yl~  332 (502)
                      +|.++|++||+.+++|.++.|+.....-+.....++ ..|.+++  .|.++..+ ..|.++.++.-  ...+..  .+..
T Consensus       253 ~lr~lc~~~g~llI~DEV~tG~GRtG~~fa~e~~gv-~PDiv~~--gKgl~gG~~P~~av~~~~~i--~~~~~~--~~~~  325 (459)
T PRK06082        253 RVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAYGI-EPDILCI--GKGLGGGLVPIAAMITKDKY--NTAAQI--SLGH  325 (459)
T ss_pred             HHHHHHHHcCCEEEEechhhCCCccchhhHhHhhCC-CCCEEEe--cccccCCCCcceEEEEcHHH--HhhccC--CCCC
Confidence            999999999999999999887533221111111244 5888885  69987663 67888776542  122210  0000


Q ss_pred             CccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEecC--CCeeE
Q 037144          333 NEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK-RFEVAFP--RNFSL  409 (502)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~-~~~l~~~--~~~~~  409 (502)
                                       .|. .+.+..+.+..++++.+..+   +++++..++.++|++.|+++. ...++..  -...+
T Consensus       326 -----------------~T~-~gnpl~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~  384 (459)
T PRK06082        326 -----------------YTH-EKSPLGCAAALATIEVIEQE---GLLEKVKADSQFMRERLLEMKAKYPLIGDVRGIGLL  384 (459)
T ss_pred             -----------------CCC-CcCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeeccce
Confidence                             011 11111223333444444332   466777888888888886641 1212211  11224


Q ss_pred             EEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHH
Q 037144          410 VCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVR  489 (502)
Q Consensus       410 v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~  489 (502)
                      +.+.+......                   . ....+....+...+.++|.++...    +..++|++.. ...+++||+
T Consensus       385 ~~ve~~~~~~~-------------------~-~~~~~~~~~~~~~~~~~Gvl~~~~----~~~~i~~~Pp-l~it~~eid  439 (459)
T PRK06082        385 WGVELVTDRHT-------------------K-ERAYDEAEAVLYRCLNNGLSFKVS----QGNVIQLSPP-LIITREELT  439 (459)
T ss_pred             eEEEEccCccc-------------------c-CccHHHHHHHHHHHHhCCCEEEec----CCCEEEEeCC-CccCHHHHH
Confidence            44444321000                   0 000123456777888889754321    2357898853 335778999


Q ss_pred             HHHHHHHHHHHh
Q 037144          490 AAWTVVQEHLEA  501 (502)
Q Consensus       490 ~~~~~l~~~~~~  501 (502)
                      ++++++.+...+
T Consensus       440 ~~~~~l~~~l~~  451 (459)
T PRK06082        440 QALAILEEAIAK  451 (459)
T ss_pred             HHHHHHHHHHHH
Confidence            999999887653

>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional

Probab=99.27  E-value=8.2e-09  Score=103.98  Aligned_cols=277  Identities=12%  Similarity=0.041  Sum_probs=152.6

Q ss_pred             HHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEe-CCCCchhHHHHHHHcC--
Q 037144          120 IVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYS-SDQTHCAFQKAAQIVG--  196 (502)
Q Consensus       120 ~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~-s~~~H~s~~~aa~~~G--  196 (502)
                      ++.+.++++.|.+         ..+++++||+|+..|+..+|...         ++..|++ +...|-...-+....|  
T Consensus        70 ~la~~l~~~~~~~---------~v~~~~SGseA~e~Alklar~~~---------gr~~Ii~~~~syHG~t~~~ls~~~~~  131 (364)
T PRK04013         70 EMLEELSKWVNYE---------YVYMGNSGTEAVEAALKFARLYT---------GRKEIIAMTNAFHGRTMGALSATWKP  131 (364)
T ss_pred             HHHHHHHhhcCCC---------EEEEeCchHHHHHHHHHHHHHHh---------CCCEEEEECCccccCchhhccCCCCc
Confidence            3445556666543         47999999999999999998752         2334444 4444543322322211  


Q ss_pred             -----CC--CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC-C---hhHHHHHHHHhCCE
Q 037144          197 -----ID--RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD-P---LKPLCDVAKQFGIW  265 (502)
Q Consensus       197 -----lg--~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id-p---l~eI~~i~~~~g~~  265 (502)
                           .+  ...+..+|.       -|++.+++.+.+.      +.+|++.......|.+- |   +++|.++|++||+.
T Consensus       132 ~~~~~~~p~~~~~~~~~~-------~d~~~l~~~i~~~------~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gil  198 (364)
T PRK04013        132 KYREDFEPLVPGFKHIPF-------NDVEAAKEAITKE------TAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGAL  198 (364)
T ss_pred             ccccCCCCCCCCcEEecC-------CCHHHHHHHhcCC------cEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence                 10  012223332       1678888888532      34666665444445543 4   99999999999999


Q ss_pred             EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCccccc
Q 037144          266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEV  345 (502)
Q Consensus       266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~  345 (502)
                      ++.|.++.|. -...-+.....++ ..|.+++  -|.++..+..|.++.++.-  .      ......            
T Consensus       199 lI~DEv~tG~-RtG~~~a~~~~gv-~PDiv~~--gK~lggG~P~~a~~~~~~~--~------~~~~~~------------  254 (364)
T PRK04013        199 LIADEVQSGL-RTGKFLAIEHYKV-EPDIVTM--GKGIGNGVPVSLTLTNFDV--E------RGKHGS------------  254 (364)
T ss_pred             EEEechhhcC-CCCchhHHHhcCC-CCCEEEe--cccccCCceeEEEEecccc--c------CCCcCC------------
Confidence            9999998765 3222111111233 5788887  4888766778887765431  0      000000            


Q ss_pred             CCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhh
Q 037144          346 GYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRT  425 (502)
Q Consensus       346 ~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~  425 (502)
                           |+ .+.+..+.+..++++.+-++++.+.+++.      + ..+.. |.+.-+ .-..-++.+.+..+        
T Consensus       255 -----T~-~gnp~~~aaa~a~l~~i~~~~l~~~~~~~------l-~~l~~-~~v~~v-RG~Gl~~gve~~~~--------  311 (364)
T PRK04013        255 -----TF-GGNPLACKAVAVTLRILRRERLVEKAGEK------F-IEIKG-ERVVTT-RGRGLMIGIVLKKP--------  311 (364)
T ss_pred             -----CC-CcCHHHHHHHHHHHHHHHhccHHHHHHHH------H-HHhcc-Ccceee-eeCcEEEEEEeCCc--------
Confidence                 00 11122333444555555555544443321      2 12221 211101 01122334433211        


Q ss_pred             cccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          426 KYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       426 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                                            ...+.+.+.++|.+. .+   .+..++|+... ...++++++.+++.|+++.++
T Consensus       312 ----------------------~~~i~~~~~~~Gll~-~~---~g~~vlr~~Pp-l~it~~~i~~~~~~l~~~l~~  360 (364)
T PRK04013        312 ----------------------VGKYVEELQNRGYLV-HT---AGQRVIRLLPP-LIISKDTMEEAKSAIEGVIND  360 (364)
T ss_pred             ----------------------HHHHHHHHHhCCcEE-ee---CCCCEEEEeCC-cccCHHHHHHHHHHHHHHHHH
Confidence                                  235677777788653 22   23468999863 457788999999999988764

>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.26  E-value=1.6e-08  Score=105.43  Aligned_cols=327  Identities=10%  Similarity=0.030  Sum_probs=174.9

Q ss_pred             HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH
Q 037144          115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI  194 (502)
Q Consensus       115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~  194 (502)
                      ++...++.+.|++++.-+.       ...+|+++||+|+..|+..||.....+ +..+ +..+|......|-...-+..+
T Consensus        89 ~~~~~~lae~L~~~~p~~~-------~~v~f~~sGsEAve~AlKlAr~~~~~~-g~t~-r~~ii~~~~~yHG~t~ga~s~  159 (466)
T PRK07030         89 HEPVIELSERLVKITPPGL-------SRCFYADNGSSAIEVALKMSFHYWRNR-GKPR-KKRFVTLTNSYHGETLAAMSV  159 (466)
T ss_pred             CHHHHHHHHHHHHhCCCCc-------CEEEEeCCcHHHHHHHHHHHHHHHHHh-CCCC-CcEEEEECCCcCcccHHHHhc
Confidence            3455567777888763211       258999999999999999998763222 1111 223444454456443333333


Q ss_pred             cCCC---------CCCEEEEecCCCC--Cc--------ccCHHHHHHHHHHHHhcCCccEEEEEec-CCccccccCC---
Q 037144          195 VGID---------RKNIRAIKTTKSS--SY--------GLSAESVLSQINLDVEAELIPLFLCATV-GTTAITAVDP---  251 (502)
Q Consensus       195 ~Glg---------~~~v~~v~~~~~~--~~--------~~d~~~Le~~i~~~~~~g~~p~~Vv~t~-gtt~~G~idp---  251 (502)
                      .|..         ...+..+|.....  ..        .-+++.+++.+..   .+..+.+|++.- .....|.+-|   
T Consensus       160 ~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~le~~~~~---~~~~iAAvi~EP~iqg~gG~~~~~~~  236 (466)
T PRK07030        160 GDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTLAE---HHDEIAAVIVEPLIQGAGGMRMYHPV  236 (466)
T ss_pred             cCCccccccCCccCCCCEEcCCCCccccccCCCHHHHHHHHHHHHHHHHHh---CCCceEEEEEecccccCCCcccCCHH
Confidence            3321         0123344432100  00        0134566777752   223455666654 2444566533   


Q ss_pred             -hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-cceEEEeeCchhhhhhhcCCc-
Q 037144          252 -LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-DCCCLWVKDPSCLLSTLSTNP-  328 (502)
Q Consensus       252 -l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~~-  328 (502)
                       +++|.++|++||+.+++|..+.|+.....-+.....++ ..|.++++  |.++..+ ..|.++.++.-  .+.+.... 
T Consensus       237 yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~a~~~~gv-~PDiv~~g--Kgl~gG~~Pi~av~~~~ei--~~~~~~~~~  311 (466)
T PRK07030        237 YLKLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGI-RPDFLCLS--KALTGGYLPLAAVLTTDTV--YQAFYDDYP  311 (466)
T ss_pred             HHHHHHHHHHHcCCEEEEeehhhCcCccccchHHHhcCC-CCCEEeee--hhccCCcccceEEEecHHH--HHHHhcccc
Confidence             88999999999999999999877643322222112244 58999985  8887664 67888776442  22332110 


Q ss_pred             ---ccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-
Q 037144          329 ---QYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP-  404 (502)
Q Consensus       329 ---~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~-  404 (502)
                         .+... .               |. .+.+....+..++++.+-++   +++++..++.++|++.|+++.....+.. 
T Consensus       312 ~~~~~~h~-~---------------T~-~gnpla~aaa~a~L~~i~~~---~l~~~~~~~G~~l~~~L~~l~~~~~v~~v  371 (466)
T PRK07030        312 TLRAFLHS-H---------------SY-TGNPLACAAALATLDIFEQD---NVIENNRALARRMAEATAHLADHPHVAEV  371 (466)
T ss_pred             cccccccC-C---------------CC-CCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHhcCCCEEEe
Confidence               01100 0               10 11122223333444444333   4567778888888888876422211211 


Q ss_pred             -CCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCC
Q 037144          405 -RNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMT  483 (502)
Q Consensus       405 -~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t  483 (502)
                       -...++.+.+.......            . ..  . .. .....++.+++.++|.+. .+.   + ..+|+... ...
T Consensus       372 rG~Gl~~gie~~~~~~~~------------~-~~--~-~~-~~~~~~i~~~~~~~Gvl~-~~~---g-~~i~~~Pp-l~i  428 (466)
T PRK07030        372 RQTGMILAIEMVQDKASK------------T-PY--P-WQ-ERRGLKVYQHALERGALL-RPL---G-SVVYFLPP-YVI  428 (466)
T ss_pred             EeceeEEEEEeccCcccc------------c-cC--c-ch-hHHHHHHHHHHHHCCeEE-Eec---C-CEEEEECC-ccC
Confidence             11223444443211000            0 00  0 00 122356778888889644 321   2 36888753 456


Q ss_pred             cHHHHHHHHHHHHHHHHh
Q 037144          484 MESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       484 ~~~di~~~~~~l~~~~~~  501 (502)
                      +++||+.+++.+.+.+++
T Consensus       429 t~~eid~~~~~l~~al~~  446 (466)
T PRK07030        429 TPEQIDFLAEVASEGIDI  446 (466)
T ss_pred             CHHHHHHHHHHHHHHHHH
Confidence            788999999999988764

>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type

Probab=99.26  E-value=1e-08  Score=106.02  Aligned_cols=289  Identities=11%  Similarity=0.043  Sum_probs=155.2

Q ss_pred             cEEEcCCchHHHHHHHHHHHHHHHHH-hC-------c----------cCCCC-eEEEeCCCCchhHHHHHHHcCCCC---
Q 037144          142 GGVIQGTTCEALLCTLTAARDRVLKK-IG-------R----------ENISK-LVVYSSDQTHCAFQKAAQIVGIDR---  199 (502)
Q Consensus       142 ~g~~t~ggt~a~~~al~~a~~~~~~~-~~-------~----------~~~~~-~~v~~s~~~H~s~~~aa~~~Glg~---  199 (502)
                      ..+|++|||+||..|+..||...... .+       .          .|.++ .+|......|-...-+....|-..   
T Consensus       124 ~v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~  203 (464)
T TIGR00699       124 QVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHK  203 (464)
T ss_pred             EEEEeCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccc
Confidence            57999999999999999998753211 00       0          01112 344445555655444444433210   


Q ss_pred             -----CCEEEEecCCC-CCc-----------ccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHH
Q 037144          200 -----KNIRAIKTTKS-SSY-----------GLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDV  258 (502)
Q Consensus       200 -----~~v~~v~~~~~-~~~-----------~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i  258 (502)
                           ..+..+|.... ..+           .-+++.|++++++.   +..+.+|++.......|.+-|    +++|.++
T Consensus       204 ~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~---~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~l  280 (464)
T TIGR00699       204 LDIPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKW---HKPVAAIIVEPIQSEGGDNHASPDFFRKLRDI  280 (464)
T ss_pred             cCCCCCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHhc---CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHH
Confidence                 01222332210 000           01356677777532   223567777766666788877    9999999


Q ss_pred             HHHhCCEEEeecccccccccCccchhhhcCCC-CCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcC-CcccccCccC
Q 037144          259 AKQFGIWVHVDAAYAGSACICPEFRHFIDGVE-CVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLST-NPQYLKNEAT  336 (502)
Q Consensus       259 ~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~-~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~  336 (502)
                      |++||+.+++|.++.|+.....-+..-..++. ..|.++++  |.++.   .|+++.+ .     .+.. .+.+..+.  
T Consensus       281 c~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~~~PDi~t~g--K~lg~---gG~~~~~-~-----~~~~~~~~~~~~T--  347 (464)
T TIGR00699       281 TKKHNVAFIVDEVQTGVGATGKFWAHEHWNLDDPPDMVTFS--KKFQT---AGYFFHD-P-----AFRPNKPYRQFNT--  347 (464)
T ss_pred             HHHcCCEEEEeeeeeCCCCCcchhHHHhcCCCCCCCEEEeh--hhhcc---CCccccc-h-----hccCCCCcccccC--
Confidence            99999999999998765332221121122443 58988874  88741   1222221 1     1111 01111100  


Q ss_pred             CCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCC-eEEe-cCCCeeEE
Q 037144          337 DQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTS----DKR-FEVA-FPRNFSLV  410 (502)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~----~~~-~~l~-~~~~~~~v  410 (502)
                                     . .+.+..+....++++.+-.+   ++.++..++.++|.+.|++    .|. +.-+ ......++
T Consensus       348 ---------------~-~gnp~~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm~  408 (464)
T TIGR00699       348 ---------------W-MGDPSRALILREIIQEIKRK---DLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFI  408 (464)
T ss_pred             ---------------C-CCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEEE
Confidence                           0 11111222333344444333   3555666666777777755    331 2112 11234455


Q ss_pred             EEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHH
Q 037144          411 CFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRA  490 (502)
Q Consensus       411 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~  490 (502)
                      .+.+..                            ......+.+.+.++|.+. ...   +...||++.. ...+++||+.
T Consensus       409 gie~~~----------------------------~~~~~~i~~~~~~~Gvl~-~~~---g~~~ir~~Pp-l~it~~eid~  455 (464)
T TIGR00699       409 AWDTPD----------------------------EAKRDKLLKKARNNGVNI-GGC---GVKAIRLRPM-LVFQKHHADI  455 (464)
T ss_pred             EEecCC----------------------------HHHHHHHHHHHHHCCcEE-ecC---CCCeEEEeCC-CCCCHHHHHH
Confidence            555421                            122457788888889754 221   4468999874 5567789999


Q ss_pred             HHHHHHHH
Q 037144          491 AWTVVQEH  498 (502)
Q Consensus       491 ~~~~l~~~  498 (502)
                      ++++|.++
T Consensus       456 ~~~~l~~~  463 (464)
T TIGR00699       456 FLEIISKI  463 (464)
T ss_pred             HHHHHHHh
Confidence            99999875

Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.

>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional

Probab=99.25  E-value=1.2e-08  Score=106.24  Aligned_cols=328  Identities=11%  Similarity=0.036  Sum_probs=170.6

Q ss_pred             HHHHHHHHHHHHhcCCCCccCcCCCCcEEEc-CCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH
Q 037144          116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQ-GTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI  194 (502)
Q Consensus       116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t-~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~  194 (502)
                      +.+.++.+.|.+++.-+-.    .....+|+ ++||+|+..|++.||...    +    +..+|......|-...-+..+
T Consensus       106 ~~~~~la~~L~~~~p~~~~----~~~~v~f~~~SGSEAve~AlklAr~~t----g----r~~ii~~~~~yHG~t~~als~  173 (464)
T PRK06938        106 PVKDQFVQDLFASLPEAFA----REAKIQFCGPTGTDAVEAALKLVKTAT----G----RSTVLSFQGGYHGMSQGALSL  173 (464)
T ss_pred             HHHHHHHHHHHHhCccccc----ccceEEEeCCCcHHHHHHHHHHHHHhh----C----CCeEEEECCccCCccHHHHhh
Confidence            3444455666666531100    00124454 799999999999998651    1    223444444455443333333


Q ss_pred             cCC-------C--CCCEEEEecCCCCCc----------ccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----
Q 037144          195 VGI-------D--RKNIRAIKTTKSSSY----------GLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----  251 (502)
Q Consensus       195 ~Gl-------g--~~~v~~v~~~~~~~~----------~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----  251 (502)
                      .|-       +  ...+..+|.......          ..+.+.+++.+.+.......+.+|++.-.....|.+-|    
T Consensus       174 t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~y  253 (464)
T PRK06938        174 MGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEW  253 (464)
T ss_pred             cCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHH
Confidence            221       0  113455654321000          12367788888542211123556666654444566533    


Q ss_pred             hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccc
Q 037144          252 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYL  331 (502)
Q Consensus       252 l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl  331 (502)
                      +++|.++|++||+.+++|..+.|+.....-+..-..++ ..|.++++  |.++..+..|.++.++.  + +.+.  +.+.
T Consensus       254 l~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~e~~gv-~PDiv~~g--KglggG~PlsAv~~~~~--~-~~~~--~~~~  325 (464)
T PRK06938        254 LRGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGI-IPDVVVLS--KAIGGSLPLAVVVYREW--L-DTWQ--PGAH  325 (464)
T ss_pred             HHHHHHHHHHcCCEEEEeccccCCCcCcHHHHHHhcCC-CCCEEEee--ccccCCCceEEEeehhH--h-hccC--CCCC
Confidence            88999999999999999999877643222111111234 58999985  88876677899888644  2 2221  1111


Q ss_pred             cCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEecCC--Cee
Q 037144          332 KNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD-KRFEVAFPR--NFS  408 (502)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~-~~~~l~~~~--~~~  408 (502)
                      .+                 |+ .+.+....+..++++.+..+   ++.++..++.++|.+.|+++ ....++...  ...
T Consensus       326 ~~-----------------T~-~gnpla~Aaa~a~L~~l~~~---~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Gl  384 (464)
T PRK06938        326 AG-----------------TF-RGNQMAMAAGSATLRYIKEH---RLAEHAAAMGERLREHLRQLQRDYPQLGDVRGRGL  384 (464)
T ss_pred             CC-----------------CC-CcCHHHHHHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccce
Confidence            10                 11 11111223333444444333   45566777777777777653 112122111  122


Q ss_pred             EEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHH
Q 037144          409 LVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHV  488 (502)
Q Consensus       409 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di  488 (502)
                      ++.+.+......         .+.    .. ...........+.+.+.++|.++. +... ...+||+... ...+++||
T Consensus       385 m~gie~~~~~~~---------~~~----~~-~~~~~~~~~~~~~~~~~~~Gll~~-~~g~-~~~~l~~~Pp-l~it~~ei  447 (464)
T PRK06938        385 MLGVEIVDPQGE---------PDA----LG-HPPANGELASLIQRECLRRGLILE-LGGR-HGSVVRFLPP-LIITAEQI  447 (464)
T ss_pred             EEEEEeccCccc---------ccc----cc-cCCccHHHHHHHHHHHHHCCeEEe-ecCC-CCCEEEEECC-CccCHHHH
Confidence            444444321100         000    00 000001334567788888896543 2211 1357998753 44677899


Q ss_pred             HHHHHHHHHHHHh
Q 037144          489 RAAWTVVQEHLEA  501 (502)
Q Consensus       489 ~~~~~~l~~~~~~  501 (502)
                      +++++++.++..+
T Consensus       448 d~~~~~l~~~l~~  460 (464)
T PRK06938        448 DEVAEIFAEAVAA  460 (464)
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999887654

>PRK07046 aminotransferase; Validated

Probab=99.25  E-value=9.5e-09  Score=106.68  Aligned_cols=306  Identities=13%  Similarity=0.071  Sum_probs=163.9

Q ss_pred             HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCe-EEEeCCCCchhHHHHHH
Q 037144          115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKL-VVYSSDQTHCAFQKAAQ  193 (502)
Q Consensus       115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~-~v~~s~~~H~s~~~aa~  193 (502)
                      ++.+.++.+.++++++++         ...|+++||||+..|+..||...         ++. +|-.....|-.......
T Consensus       114 ~~~~~~lAe~l~~~~~~~---------~v~F~nSGtEA~e~AlrlAR~~T---------Gr~~ii~~~g~YHG~~d~~l~  175 (453)
T PRK07046        114 SEDAAWVGEELARRFGLP---------YWQVATTATDANRFVLRWARAVT---------GRPKILVFNGCYHGTVDDVFV  175 (453)
T ss_pred             CHHHHHHHHHHHHHhCCC---------EEEEECCHHHHHHHHHHHHHHhh---------CCCEEEEECCCCCCCcHHhHh
Confidence            456777888888887532         47999999999999999999752         233 33334444533211111


Q ss_pred             Hc------------CCCC---CCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhH
Q 037144          194 IV------------GIDR---KNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKP  254 (502)
Q Consensus       194 ~~------------Glg~---~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~e  254 (502)
                      ..            |+..   ..+..+|.       -|+++|++.+..     ....+|++.......|.+-|    +++
T Consensus       176 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------nd~~~l~~~l~~-----~~vAavi~EPi~g~~G~~~p~~~fl~~  243 (453)
T PRK07046        176 DLVDGRPVQRPGLLGQVHDLTATTRVVEF-------NDLAALEAALAD-----GDVAAVLAEPAMTNIGMVLPEPGFHEA  243 (453)
T ss_pred             hccCCCCCCCCCCCCCCccccCceEeeCC-------CCHHHHHHHhCC-----CCeEEEEECCCCCCCCCcCCCHHHHHH
Confidence            10            1100   01222221       278999988842     12456666655555566655    899


Q ss_pred             HHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCC-cccccC
Q 037144          255 LCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTN-PQYLKN  333 (502)
Q Consensus       255 I~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~-~~yl~~  333 (502)
                      |.++|++||+.+++|.++. +-.-.-.... .-++ ..|.+++  -|.++..+++|.+..++. . .+.+... ..... 
T Consensus       244 lr~lc~~~g~llI~DEV~t-fr~g~Gg~~~-~~gv-~PDi~t~--gK~lggG~Pi~av~g~~~-i-~~~~~~~~~~~~~-  315 (453)
T PRK07046        244 LRELTRRYGTLLVIDETHT-ISSGPGGYTR-AHGL-EPDFLVV--GKPIAGGVPCAVYGFSAE-L-AERAQAAKASAPP-  315 (453)
T ss_pred             HHHHHHHhCCEEEEEcccc-CccCCcchhH-HhCC-Cccceee--hhhhcCCCcceeeeehHH-H-HHHHhhccccCCC-
Confidence            9999999999999999874 1000000111 1144 5788886  599887788998887644 2 2233210 00000 


Q ss_pred             ccCCCCCcccccCCCcccccCCCCCCchHH---HHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCC-eEEecCC
Q 037144          334 EATDQEPKEQEVGYKDWQITLCRRFRSLKL---WVVIRNFGVANLRNFIRSHVGMAKLFERLVTS----DKR-FEVAFPR  405 (502)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~~sr~~~al~~---~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~----~~~-~~l~~~~  405 (502)
                               +.     .....+-...++.+   .++++.+-.   .+..++..++.++|++.|++    .+- +.+.+..
T Consensus       316 ---------~~-----~~~~~T~~gnpl~~aa~~a~L~~l~~---~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v~g~G  378 (453)
T PRK07046        316 ---------GH-----SGIGTTLSANALAMAAMRATLAEVMT---EAAYAHMLALAARLAAGLRAVIARHGLPWHVTRVG  378 (453)
T ss_pred             ---------CC-----ceeCCCCcccHHHHHHHHHHHHHHhc---ccHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence                     00     00001111123333   334444422   23455666666777666653    321 1222211


Q ss_pred             CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHh--hHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCC
Q 037144          406 NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEER--TNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMT  483 (502)
Q Consensus       406 ~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t  483 (502)
                        .++.+.+.+.....          .      .+...  -......+...+.++|.++ .+.    ...++++..   .
T Consensus       379 --~~~~i~~~~~~~~~----------~------~~~~~~~~~~~~~~~~~~~~~~Gv~~-~~~----~~~~~~~p~---~  432 (453)
T PRK07046        379 --ARVEFQFAPTPPRN----------G------AEAAAALDPELEAALHLYLLNRGVLI-TPF----HNMMLVCPA---T  432 (453)
T ss_pred             --cEEEEEEeCCCCCC----------H------HHHhcccCHHHHHHHHHHHHHCCCEE-ecc----cCcEEEeCC---C
Confidence              23444432211000          0      00000  0234567778888889754 321    135677642   4


Q ss_pred             cHHHHHHHHHHHHHHHHh
Q 037144          484 MESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       484 ~~~di~~~~~~l~~~~~~  501 (502)
                      +++|||++++++.+..++
T Consensus       433 t~~did~~~~~~~~~l~~  450 (453)
T PRK07046        433 TAADVDRLVAAFDACLGE  450 (453)
T ss_pred             CHHHHHHHHHHHHHHHHH
Confidence            677999999999988764

>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase

Probab=99.25  E-value=1e-08  Score=105.95  Aligned_cols=312  Identities=12%  Similarity=0.018  Sum_probs=168.2

Q ss_pred             HHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCC
Q 037144          118 ENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGI  197 (502)
Q Consensus       118 e~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Gl  197 (502)
                      ..++.+.+.++++-+-       ...+|+.+||+|+..|+..||.....+ +..+ +..+|..+...|-...-+..+.|.
T Consensus        90 ~~~la~~l~~~~~~~~-------~~v~f~~sGseA~e~AlklAr~~~~~~-~~~~-r~~il~~~~~yHG~t~~~~s~~~~  160 (427)
T TIGR00508        90 AIELCQKLVKMTPNAL-------DCVFLADSGSVAVEVALKMALQYWQAK-GEKN-RQKFLTIRSGYHGDTFGAMSVCDP  160 (427)
T ss_pred             HHHHHHHHHhhCCCCC-------CEEEEeCCcHHHHHHHHHHHHHHHHhh-CCCC-ccEEEEEcCCcCCccHhhhcccCC
Confidence            3456677788764321       258999999999999999999864321 1111 233555555566443323222221


Q ss_pred             ----------CCCCEEEEecCCCCCc-----ccCHHHHHHHHHHHHhcCCccEEEEEecC-Cccccc----cCChhHHHH
Q 037144          198 ----------DRKNIRAIKTTKSSSY-----GLSAESVLSQINLDVEAELIPLFLCATVG-TTAITA----VDPLKPLCD  257 (502)
Q Consensus       198 ----------g~~~v~~v~~~~~~~~-----~~d~~~Le~~i~~~~~~g~~p~~Vv~t~g-tt~~G~----idpl~eI~~  257 (502)
                                ....+..+|... ..+     .-|++++++.+.+.   +....+|++... ....|.    .+++++|.+
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~~l~~~l~~~---~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~  236 (427)
T TIGR00508       161 ENSMHSLYKGYLPEQIFAPAPQ-NRFDEEWNEEAITPLAKLMELH---SDEIAAVILEPIVQGAGGMRFYHPTYLKRVQA  236 (427)
T ss_pred             cccccccccccCCCCeEcCCCC-ccccchhHHHHHHHHHHHHHhc---CCcEEEEEEechhcCcCCcccCCHHHHHHHHH
Confidence                      001122333211 011     12567777777532   222345555543 333332    377999999


Q ss_pred             HHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-cceEEEeeCchhhhhhhcCC--cccccCc
Q 037144          258 VAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-DCCCLWVKDPSCLLSTLSTN--PQYLKNE  334 (502)
Q Consensus       258 i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~--~~yl~~~  334 (502)
                      +|++||+.+++|.++.|+......+.....++ ..|.+++  .|.++..+ .++.++.++. . .+.+...  ..+....
T Consensus       237 lc~~~~~llI~DEv~tG~Gr~G~~~~~~~~~v-~pDi~~~--gK~l~gG~~p~~a~~~~~~-~-~~~~~~~~~~~~~~~~  311 (427)
T TIGR00508       237 LCKQYDILLIADEIATGFGRTGKLFACEHAGV-VPDILCV--GKALTGGYMTLSATVTTDK-V-AQTISSGEAGCFMHGP  311 (427)
T ss_pred             HHHHcCCEEEEeccccCCCcCCccchhhhcCC-CCCEEEe--chhhhcCcccceEEEEcHH-H-HHHHhcCCCCccccCC
Confidence            99999999999999865422211111111233 5787775  69886553 4666666533 2 2333211  1111110


Q ss_pred             cCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC--CCeeEEEE
Q 037144          335 ATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP--RNFSLVCF  412 (502)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~--~~~~~v~f  412 (502)
                                      |. .+.+.......++++.+..+   +..++..++.++|++.|+++.....+..  -...++.+
T Consensus       312 ----------------T~-~g~p~~~aaa~a~l~~l~~~---~~~~~~~~~~~~l~~~L~~l~~~~~i~~vrg~G~~~~i  371 (427)
T TIGR00508       312 ----------------TF-MGNPLACAVAEASLAILLEG---EWQKQVSAIENQLKRELSPLRKNPVVKDVRVLGAIGVV  371 (427)
T ss_pred             ----------------CC-CcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHhhcCCCEEeEeccccEEEE
Confidence                            00 01122333444555554332   3467788888889888877532111111  11334444


Q ss_pred             EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHH
Q 037144          413 RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAW  492 (502)
Q Consensus       413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~  492 (502)
                      .+....                            ....+.+++.++|.. +.+.   + ..+|++.. ...+++|||+++
T Consensus       372 ~~~~~~----------------------------~~~~~~~~l~~~Gv~-~~~~---~-~~l~~~pp-l~~t~~~id~~~  417 (427)
T TIGR00508       372 EMYKPV----------------------------NVEELQKKFVEQGVW-IRPF---G-KLIYVMPP-YIITTEQLQKLT  417 (427)
T ss_pred             EECCcc----------------------------CHHHHHHHHHHCCeE-EEec---C-CEEEEECC-CCCCHHHHHHHH
Confidence            443210                            124577788888964 3332   1 36888764 345677999999


Q ss_pred             HHHHHHHHh
Q 037144          493 TVVQEHLEA  501 (502)
Q Consensus       493 ~~l~~~~~~  501 (502)
                      +++.+.+++
T Consensus       418 ~~l~~~l~~  426 (427)
T TIGR00508       418 AALIEALHE  426 (427)
T ss_pred             HHHHHHHhc
Confidence            999988754

All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.

>PRK08297 L-lysine aminotransferase; Provisional

Probab=99.24  E-value=1.6e-08  Score=104.84  Aligned_cols=311  Identities=10%  Similarity=0.054  Sum_probs=161.0

Q ss_pred             HHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCC----CCeEEEeCCCCchhHHHHHHH
Q 037144          119 NIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENI----SKLVVYSSDQTHCAFQKAAQI  194 (502)
Q Consensus       119 ~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~----~~~~v~~s~~~H~s~~~aa~~  194 (502)
                      .++.+.|.++.+ |...     ...+|++|||||+..|++.||.....+....+.    +..+|......|-...-+...
T Consensus        95 ~~la~~l~~~~~-p~~~-----~~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~  168 (443)
T PRK08297         95 ARFVDTFARVLG-DPEL-----PHLFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSL  168 (443)
T ss_pred             HHHHHHHHhhcC-CCCC-----CEEEEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhh
Confidence            345556666653 2211     258999999999999999998753211000111    123444444455443333333


Q ss_pred             cCCCC------C--CEEEEecCC------CCC-------cccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc----
Q 037144          195 VGIDR------K--NIRAIKTTK------SSS-------YGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV----  249 (502)
Q Consensus       195 ~Glg~------~--~v~~v~~~~------~~~-------~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i----  249 (502)
                      .|...      .  ....+|...      +.+       ..-+++++++.+..   .+..+.+|++.-.....|.+    
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~~~iAavI~EPi~g~~G~~~pp~  245 (443)
T PRK08297        169 TNTDPRKTARFPKFDWPRIDNPKLRFPLPGEDLEEVEALEAEALAQARAAFER---HPHDIACFIAEPIQGEGGDNHFRP  245 (443)
T ss_pred             cCCcccccccCCCCCccccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHh---CCCcEEEEEEccccCCCCCcCCCH
Confidence            33100      0  000111100      000       00123455566643   23446677776655556666    


Q ss_pred             CChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCch-hhh-hhhcCC
Q 037144          250 DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPS-CLL-STLSTN  327 (502)
Q Consensus       250 dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~-~l~-~~~~~~  327 (502)
                      +.+++|.++|++||+++++|.++.|+.....-+..-..++ ..|.+++  .|.+  |  .|.++++++- ... ..+.. 
T Consensus       246 ~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gK~l--~--~~a~l~~~~i~~~~~~~~~~-  317 (443)
T PRK08297        246 EFFAAMRELCDEHDALLIFDEVQTGVGLTGTAWAYQQLGV-RPDIVAF--GKKT--Q--VCGIMAGRRVDEVEDNVFAV-  317 (443)
T ss_pred             HHHHHHHHHHHHcCCEEEEechhhccCccchHHHHHhcCC-CCCEEEe--cccc--c--ccceecchHHHHhhhhhccC-
Confidence            5699999999999999999999977533221111111233 5898886  4876  3  3444444321 110 01100 


Q ss_pred             cccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCe--EE
Q 037144          328 PQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTS----DKRF--EV  401 (502)
Q Consensus       328 ~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~----~~~~--~l  401 (502)
                      ..+...                 |+ ++.+.......++++.+..+   +++++..++.++|.+.|++    .|.+  ++
T Consensus       318 ~~~~~~-----------------T~-~gnpl~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~v  376 (443)
T PRK08297        318 SSRINS-----------------TW-GGNLVDMVRARRILEVIEED---GLVENAARQGEYLLARLEELAAEFPAVVSNV  376 (443)
T ss_pred             ccccCC-----------------CC-CccHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHHCCCcceee
Confidence            000000                 11 11111222333344444332   4566677777777777765    3322  22


Q ss_pred             ecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCC
Q 037144          402 AFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNS  481 (502)
Q Consensus       402 ~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~  481 (502)
                      -  ....++.+.+..                            ......+.+.+.++|.++.+.    +...+|++.. .
T Consensus       377 r--g~G~~~~i~~~~----------------------------~~~~~~~~~~l~~~Gvl~~~~----~~~~lr~~P~-l  421 (443)
T PRK08297        377 R--GRGLMCAFDLPT----------------------------TADRDEVIRRLWEEGVLVLPC----GERSIRFRPA-L  421 (443)
T ss_pred             e--ccceEEEEEecC----------------------------HHHHHHHHHHHHHCCEEEecC----CCCeEEEECC-c
Confidence            1  223455555532                            122456777888888654322    3357899764 4


Q ss_pred             CCcHHHHHHHHHHHHHHHHhC
Q 037144          482 MTMESHVRAAWTVVQEHLEAF  502 (502)
Q Consensus       482 ~t~~~di~~~~~~l~~~~~~~  502 (502)
                      ..+++|||++++.|.++++++
T Consensus       422 ~~t~~eid~~l~~l~~~l~~~  442 (443)
T PRK08297        422 TVTTEEIDAAIDALRRALPEV  442 (443)
T ss_pred             cCCHHHHHHHHHHHHHHHHhh
Confidence            457779999999999987653

>PRK06148 hypothetical protein; Provisional

Probab=99.24  E-value=2.8e-08  Score=112.65  Aligned_cols=321  Identities=13%  Similarity=0.074  Sum_probs=175.7

Q ss_pred             HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144          116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV  195 (502)
Q Consensus       116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~  195 (502)
                      +.+.++.+.|++++.-+.+       ..+|++||||||..|++.||...    |    ++.+|......|-...-+..+.
T Consensus       663 ~~~~~lAe~L~~~~p~~~~-------~v~f~nSGsEA~e~AlklAr~~t----G----r~~ii~~~~~YHG~t~~a~s~s  727 (1013)
T PRK06148        663 DAIVAYAERLTATLPDGLT-------VAFFVNSGSEANSLALRLARAHT----G----QRDAIVLDHAYHGTTTELIDLS  727 (1013)
T ss_pred             HHHHHHHHHHHHhCCCCcC-------EEEEeCCcHHHHHHHHHHHHHhc----C----CCeEEEEcCCccCCCcchhhcC
Confidence            4455677778887642211       47999999999999999998752    1    2233444444453322222211


Q ss_pred             --------CCC-CCCEEEEecCCC--CCcc-cC-------HHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----h
Q 037144          196 --------GID-RKNIRAIKTTKS--SSYG-LS-------AESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----L  252 (502)
Q Consensus       196 --------Glg-~~~v~~v~~~~~--~~~~-~d-------~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l  252 (502)
                              +.+ ...+..++....  ..+. -+       .+.++++++.....+..+.+|++.......|.+-|    +
T Consensus       728 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl  807 (1013)
T PRK06148        728 PYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYL  807 (1013)
T ss_pred             chhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHH
Confidence                    111 113333332100  0111 11       24567666543333445667777665556677766    9


Q ss_pred             hHHHHHHHHhCCEEEeecccccccccCcc-chhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccc
Q 037144          253 KPLCDVAKQFGIWVHVDAAYAGSACICPE-FRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYL  331 (502)
Q Consensus       253 ~eI~~i~~~~g~~lhVDaA~g~~~~~~~~-~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl  331 (502)
                      ++|.++|++||+.+++|.++.|+...... +..-..++ ..|.++++  |.++..+..|.++.++. . .+.+.....+.
T Consensus       808 ~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv-~PDivt~g--K~lggG~Plgav~~~~e-i-~~~~~~g~~~~  882 (1013)
T PRK06148        808 REVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGV-VPDIVTMG--KPIGNGHPMGAVVTTRE-I-ADSFDNGMEYF  882 (1013)
T ss_pred             HHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCC-Ccceeeec--ccccCCcceEEEEEcHH-H-HhhccCCCccc
Confidence            99999999999999999998766332221 11111244 68998874  99987788999988633 2 23332111111


Q ss_pred             cCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEecCC--Cee
Q 037144          332 KNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD-KRFEVAFPR--NFS  408 (502)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~-~~~~l~~~~--~~~  408 (502)
                       +                 |+ .+.+..+.+..++++.+..+   ++.++..++.++|+++|+++ ....++...  ...
T Consensus       883 -~-----------------Tf-~gnpla~aaa~a~L~~i~~e---~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Gl  940 (1013)
T PRK06148        883 -N-----------------TF-GGNPVSCAIGLAVLDIIEDE---DLQRNALEIGNYLLAGLRELQDRFDIIGDVRGMGL  940 (1013)
T ss_pred             -c-----------------CC-CCCHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHHHHHHHHHhCCCceEEeeece
Confidence             0                 10 11122223334445444333   45566777778887777653 111122111  122


Q ss_pred             EEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHH
Q 037144          409 LVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHV  488 (502)
Q Consensus       409 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di  488 (502)
                      ++.+.+.....                    ......+....+.+.+.++|.++ .+... ...++|+... ...++++|
T Consensus       941 ~~gvel~~~~~--------------------~~~~~~~~~~~i~~~~~~~Gvl~-~~~g~-~~~vlr~~Pp-l~it~~~i  997 (1013)
T PRK06148        941 FLGIELVTDRK--------------------TKAPATAIARYVKNGARERGILI-GTEGP-HDNVLKIRPP-LIFSRADA  997 (1013)
T ss_pred             EEEEEecCCcc--------------------ccCccHHHHHHHHHHHHhCCeEE-eccCC-CCCEEEEeCC-ccCCHHHH
Confidence            33444432110                    00000234567888888889754 32211 1367898864 55677899


Q ss_pred             HHHHHHHHHHHHh
Q 037144          489 RAAWTVVQEHLEA  501 (502)
Q Consensus       489 ~~~~~~l~~~~~~  501 (502)
                      |++++.+.+++.+
T Consensus       998 d~~l~~l~~~l~~ 1010 (1013)
T PRK06148        998 DHLLEVLDDVLAA 1010 (1013)
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999988764

>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.24  E-value=1.6e-08  Score=104.38  Aligned_cols=315  Identities=10%  Similarity=-0.017  Sum_probs=171.5

Q ss_pred             HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144          116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV  195 (502)
Q Consensus       116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~  195 (502)
                      +.+.++.+.|.+++.-+.       ...+|+++||+|+-.|+..||.....+ +..+ +..+|......|-.-.-+..+.
T Consensus        87 ~~~~~lae~L~~~~p~~~-------~~v~f~~sGseAve~AlklAr~~~~~~-g~~~-r~~ii~~~~~yHG~t~~a~s~~  157 (429)
T PRK06173         87 EPAVELAQKLLEILPPSL-------NKIFFADSGSVAVEVAMKMALQYQQAK-GEVQ-RTKFATIRSGYHGDTWHAMSVC  157 (429)
T ss_pred             HHHHHHHHHHHhhCCCCc-------CEEEEeCCchHHHHHHHHHHHHHHHHh-CCCC-CcEEEEECCCcCCcchhhhccC
Confidence            344556677777763211       258999999999999999999753222 2111 2234444444554322222221


Q ss_pred             CC----------CCCCEEEEecCCCC---C-cccCHHHHHHHHHHHHhcCCccEEEEEecC-CccccccC----ChhHHH
Q 037144          196 GI----------DRKNIRAIKTTKSS---S-YGLSAESVLSQINLDVEAELIPLFLCATVG-TTAITAVD----PLKPLC  256 (502)
Q Consensus       196 Gl----------g~~~v~~v~~~~~~---~-~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~g-tt~~G~id----pl~eI~  256 (502)
                      |-          ....+..+|.....   . ..-+++.|++.|..   .+..+.+|++... ....|.+-    =+++|.
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~~---~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~  234 (429)
T PRK06173        158 DPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLEQ---KGDEIAALILEPVVQGAGGMYFYSPTYLVKAR  234 (429)
T ss_pred             CCchhhhhcccccCCCCeEeCCCCcccchhHHHHHHHHHHHHHHh---CCCcEEEEEEcchhhccCCcccCCHHHHHHHH
Confidence            10          01123444432100   0 01246667777753   2234556666543 44445552    388999


Q ss_pred             HHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-cceEEEeeCchhhhhhhcCCc--ccccC
Q 037144          257 DVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-DCCCLWVKDPSCLLSTLSTNP--QYLKN  333 (502)
Q Consensus       257 ~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~~--~yl~~  333 (502)
                      ++|++||+++++|.++.|+.-...-+.....++ ..|.++  ..|.++..+ .++.++.++. . .+.+....  .+...
T Consensus       235 ~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv-~PDiv~--~gK~l~gG~~p~~a~~~~~~-i-~~~~~~~~~~~~~~~  309 (429)
T PRK06173        235 ELCDQYGVLLIFDEIATGFGRTGKLFALEHAGV-VPDIMC--IGKALTGGYLTLSATITTEA-I-AQTICSGEAKCFMHG  309 (429)
T ss_pred             HHHHHcCCeEEecchhcCCCcCCcchHHHhcCC-CCCEEE--eehhhhCCccccceEEecHH-H-HHHHhcCCCCccccC
Confidence            999999999999999965322111111111234 478887  469886553 5777776543 2 22332110  11111


Q ss_pred             ccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC--CCeeEEE
Q 037144          334 EATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP--RNFSLVC  411 (502)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~--~~~~~v~  411 (502)
                      .                |. .+.+..+....++++.+-.+   ...++..++.++|++.|+++.++..+..  -...++.
T Consensus       310 ~----------------T~-~g~p~~~aaa~a~l~~i~~~---~~~~~~~~~g~~l~~~L~~~~~~~~v~~vRg~Gl~~~  369 (429)
T PRK06173        310 P----------------TF-MANPLACAIAAESIRLLLES---PWQQNIQRIEAQLKQELAPAAEFDSVAEVRVLGAIGV  369 (429)
T ss_pred             C----------------CC-CcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEE
Confidence            0                00 01122334445555555333   3467778888899888875433332221  1233455


Q ss_pred             EEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHH
Q 037144          412 FRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAA  491 (502)
Q Consensus       412 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~  491 (502)
                      +.+....                            ....+.+.+.++|.+. .+.   + .++|+... ...+++||+++
T Consensus       370 iel~~~~----------------------------~~~~i~~~l~e~Gi~v-~~~---g-~~l~~~Pp-l~it~~ei~~~  415 (429)
T PRK06173        370 VEMKEPV----------------------------NMATLQPRFVEHGIWV-RPF---G-KLVYIMPP-FIISPDELSQL  415 (429)
T ss_pred             EEeCCcc----------------------------cHHHHHHHHHHCCeEE-Eec---C-CEEEEeCC-ccCCHHHHHHH
Confidence            5553210                            1346777888888643 332   2 47999863 55778899999


Q ss_pred             HHHHHHHHHh
Q 037144          492 WTVVQEHLEA  501 (502)
Q Consensus       492 ~~~l~~~~~~  501 (502)
                      ++.|.++..+
T Consensus       416 ~~~l~~~l~~  425 (429)
T PRK06173        416 TSGLLRVLKQ  425 (429)
T ss_pred             HHHHHHHHHH
Confidence            9999988754

>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.24  E-value=1.2e-08  Score=105.06  Aligned_cols=310  Identities=9%  Similarity=-0.025  Sum_probs=161.7

Q ss_pred             HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcC
Q 037144          117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVG  196 (502)
Q Consensus       117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~G  196 (502)
                      ...++.+.|+++.+.+-       ...+|+++||+|+..|+..||.....+ +..+ +.-+|......|-...-+..+.+
T Consensus        84 ~~~~lae~L~~~~p~~~-------~~v~f~~SGseA~e~AlklAr~~~~~~-g~~~-r~~ii~~~~~yHG~t~~als~~~  154 (422)
T PRK05630         84 PAIKLTRKLLNLTDNGL-------DHVFYSDSGSVSVEVAIKMALQYSKGQ-GHPE-RTRLLTWRSGYHGDTFAAMSVCD  154 (422)
T ss_pred             HHHHHHHHHHhhCCCCc-------CEEEEeCCcHHHHHHHHHHHHHHHHhc-CCCC-CcEEEEECCCcCCccHHHhccCC
Confidence            34456677777763221       157999999999999999998763221 2111 12244445555643333333222


Q ss_pred             C----------CCCCEEEEecCCCCCcccCH-------HHHHHHHHHHHhcCCccEEEEEecC-Ccccccc----CChhH
Q 037144          197 I----------DRKNIRAIKTTKSSSYGLSA-------ESVLSQINLDVEAELIPLFLCATVG-TTAITAV----DPLKP  254 (502)
Q Consensus       197 l----------g~~~v~~v~~~~~~~~~~d~-------~~Le~~i~~~~~~g~~p~~Vv~t~g-tt~~G~i----dpl~e  254 (502)
                      -          ....+..+|....  ...+.       +.+++.+.+      ...+|++.-. ....|.+    +.+++
T Consensus       155 ~~~~~~~~~~~~~~~~~~~p~~~~--~~~~~~~~~~~~~~~~~~~~~------~iAAvi~EPi~qg~gG~~~~~~~~l~~  226 (422)
T PRK05630        155 PEGGMHSLWKGTLPEQIFAPAPPV--RGSSPQEISEYLRSLELLIDE------TVAAIIIEPIVQGAGGMRFHDVALIEG  226 (422)
T ss_pred             CcccccccccccCCCCeEcCCCcc--cCCChHHHHHHHHHHHHHHhh------ceEEEEEechhcCcCCcccCCHHHHHH
Confidence            1          0012344443311  01122       333443432      2345555432 3334543    56999


Q ss_pred             HHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-cceEEEeeCchhhhhhhcCC--cccc
Q 037144          255 LCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-DCCCLWVKDPSCLLSTLSTN--PQYL  331 (502)
Q Consensus       255 I~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~--~~yl  331 (502)
                      |.++|++||+++++|.++.|+.....-+.....++ ..|.+++  -|.++..+ ..|.+++++.-  .+.+...  ...+
T Consensus       227 lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv-~PDi~t~--gK~l~gG~~p~~av~~~~~i--~~~~~~~~~~~~~  301 (422)
T PRK05630        227 VRTLCDKHDILLIADEIATGFGRTGELFATLAAGV-TPDIMCV--GKALTGGFMSFAATLCTDKV--AQLISTPNGGGAL  301 (422)
T ss_pred             HHHHHHHcCCEEEEecceeCCCcCchhhHHHhcCC-CCCeeee--echhhcCccccceeeccHHH--HHHHhccCCCCcc
Confidence            99999999999999999866532221111111233 5788876  59986542 46666665432  2233211  0000


Q ss_pred             cCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC--CCeeE
Q 037144          332 KNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP--RNFSL  409 (502)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~--~~~~~  409 (502)
                      ...               .|+ .+.+..+....++++.+..+   ...++..++.++|++.|+++.....+..  -...+
T Consensus       302 ~h~---------------~T~-~g~Pla~aaa~aaL~~l~~~---~~~~~~~~~g~~l~~~L~~l~~~~~v~~vRg~Gl~  362 (422)
T PRK05630        302 MHG---------------PTF-MANPLACAVAHASLEIIETG---MWRKQVKRIEAELIAGLSPLAHLPGVADVRVLGAI  362 (422)
T ss_pred             ccC---------------CCC-cCCHHHHHHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccccE
Confidence            000               011 11122233344555555333   3455777778888877764321111111  11234


Q ss_pred             EEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHH
Q 037144          410 VCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVR  489 (502)
Q Consensus       410 v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~  489 (502)
                      +.+.+....                            ....+.+.+.++|.+. .+.   + .++|+... ...+++|||
T Consensus       363 ~~ie~~~~~----------------------------~~~~~~~~~~~~Gl~~-~~~---g-~~l~~~Pp-L~it~~~i~  408 (422)
T PRK05630        363 GVVEMEQPV----------------------------DMEEATQAAVDHGVWL-RPF---G-RLVYVMPP-YITTSEQIA  408 (422)
T ss_pred             EEEEECCcc----------------------------cHHHHHHHHHHCCeEE-Eec---C-CEEEEECC-ccCCHHHHH
Confidence            444443210                            0235677777888643 221   3 47898763 557888999


Q ss_pred             HHHHHHHHHHHh
Q 037144          490 AAWTVVQEHLEA  501 (502)
Q Consensus       490 ~~~~~l~~~~~~  501 (502)
                      ++++.|+++.++
T Consensus       409 ~~~~~l~~al~~  420 (422)
T PRK05630        409 QICAALAAAVKA  420 (422)
T ss_pred             HHHHHHHHHHhc
Confidence            999999987653

>PRK06917 hypothetical protein; Provisional

Probab=99.23  E-value=5.6e-08  Score=100.95  Aligned_cols=333  Identities=12%  Similarity=0.025  Sum_probs=172.5

Q ss_pred             HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEe-CCCCchhHHHHHH
Q 037144          115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYS-SDQTHCAFQKAAQ  193 (502)
Q Consensus       115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~-s~~~H~s~~~aa~  193 (502)
                      .+.+.++.+.|.+++.....       ..+|+++||+|+..|+..||.....+ +..  ++..|+. ....|-...-+..
T Consensus        73 ~~~~~~lae~L~~~~p~~~~-------~v~f~~sGsEAve~AlklAr~~~~~r-g~t--~r~~ii~~~~~yHG~t~~als  142 (447)
T PRK06917         73 SEPAEKLAKKLSDLSPGDLN-------WSFFVNSGSEANETAMKIAIQHFQER-GIQ--GKHKILSRWMSYHGITMGALS  142 (447)
T ss_pred             CHHHHHHHHHHHHhCCCCCC-------EEEEeCChHHHHHHHHHHHHHHHHhc-CCC--CCCEEEEECCCcCCccHHHHH
Confidence            34555677888887743222       47999999999999999998764322 111  2333443 4344543333333


Q ss_pred             HcCCCC---------CCEEEEecCCCCCc----------ccCHHHHHHHHHHHHhcCCccEEEEEecCCcc-ccccC---
Q 037144          194 IVGIDR---------KNIRAIKTTKSSSY----------GLSAESVLSQINLDVEAELIPLFLCATVGTTA-ITAVD---  250 (502)
Q Consensus       194 ~~Glg~---------~~v~~v~~~~~~~~----------~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~-~G~id---  250 (502)
                      ..|...         ..+..+|.......          .-+++.|++.++...  +..+.+|++.-.... -|.+-   
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~--~~~iAAvi~EPi~g~~gG~~~p~~  220 (447)
T PRK06917        143 MSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATELETAIERIG--AEHIAAFIAEPIIGAAGAAVVPPK  220 (447)
T ss_pred             hcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHHHHHHHhcC--CCceEEEEEeccccCcCceecCCH
Confidence            333210         01233332110000          012456676665321  123556666543332 23442   


Q ss_pred             -ChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-cceEEEeeCchhhhhhhcCCc
Q 037144          251 -PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-DCCCLWVKDPSCLLSTLSTNP  328 (502)
Q Consensus       251 -pl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~~  328 (502)
                       =+++|.++|++||+.+++|.++.|+.....-+.....++ ..|.+++  .|.++..+ +.|.++.++. . .+.+....
T Consensus       221 ~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~a~~~~gv-~PDi~~~--gK~l~~G~~Pi~a~~~~~~-i-~~~~~~~~  295 (447)
T PRK06917        221 GYYKVIKEICDHYDILFIADEVMTGLGRTGAMFAMEHWGV-EPDIMTL--GKGLGAGYTPIAATVVSDR-V-MEPILRGS  295 (447)
T ss_pred             HHHHHHHHHHHHcCCEEEEechhhCcCcccchhhHHhcCC-CCCEEEe--eehhccCCcceEEEEEcHH-H-HHHHhccC
Confidence             288999999999999999999876533222111111234 5788777  49987654 5777777643 2 23332211


Q ss_pred             ccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEecCC--
Q 037144          329 QYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK-RFEVAFPR--  405 (502)
Q Consensus       329 ~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~-~~~l~~~~--  405 (502)
                      ..+....               |. .+.+....+..++++.+..+   ++.++..++.++|++.|+++- ...++...  
T Consensus       296 ~~~~~~~---------------T~-~gnpl~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG  356 (447)
T PRK06917        296 RSIMSGH---------------TL-SANPLSAATALAVLEYMEKH---NLPEKAAEKGEYLIKGLQKVQQQSTIIGDVRG  356 (447)
T ss_pred             ccccccc---------------CC-CCCHHHHHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHhcCCCEEEEee
Confidence            1111100               00 11122223334445444332   456677777788877776531 12222111  


Q ss_pred             CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeee---ECCEEEEEEEecCCC
Q 037144          406 NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAI---VGGIYVLRFAAGNSM  482 (502)
Q Consensus       406 ~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~---~~g~~~lR~~~~~~~  482 (502)
                      ...++.+.+.......               .  ......+....+.+.+.++|.++.....   ......+|++.. ..
T Consensus       357 ~Gl~~~ie~~~~~~~~---------------~--~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~g~~~~~i~l~Pp-l~  418 (447)
T PRK06917        357 KGLLIGVEFVADKKTK---------------Q--PFSKSQAVASELISVAAKNGLLLYPAVAGQDGKEGDAVIIAPP-MT  418 (447)
T ss_pred             cceEEEEEEeccCCcC---------------C--CCcchhHHHHHHHHHHHhCCcEEEecccccCCCCCCEEEEECC-Cc
Confidence            1223444443211000               0  0000023456788888889975432211   112357898753 44


Q ss_pred             CcHHHHHHHHHHHHHHHHh
Q 037144          483 TMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       483 t~~~di~~~~~~l~~~~~~  501 (502)
                      .+++|||++++++.+++++
T Consensus       419 it~~eid~~~~~l~~~l~~  437 (447)
T PRK06917        419 ITYSELDELLSIFAKSVEE  437 (447)
T ss_pred             CCHHHHHHHHHHHHHHHHH
Confidence            6778999999999988754

>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.22  E-value=3.7e-08  Score=102.68  Aligned_cols=330  Identities=10%  Similarity=0.012  Sum_probs=172.4

Q ss_pred             HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144          116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV  195 (502)
Q Consensus       116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~  195 (502)
                      +.+.++.+.|++++....       ...+|++|||+|+..|+..||.....+ +..+ +..+|......|-...-+..+.
T Consensus        99 ~~~~~lae~L~~~~p~~~-------~~v~f~~SGseAve~AlklAr~~~~~~-g~tg-r~~ii~~~~~YHG~t~~als~s  169 (460)
T PRK06916         99 VPSILLAEKLIEVVPEGL-------KKVFYSDSGATAVEIAIKMAFQYWQNK-GKPK-KQRFVTLKNAYHGDTIGAVSVG  169 (460)
T ss_pred             HHHHHHHHHHHHhCCCCC-------CEEEEeCCcHHHHHHHHHHHHHHHHhc-CCCC-CcEEEEECCcCCcccHHhHhcc
Confidence            445567777888764221       157999999999999999999753221 1111 2234444544565444344433


Q ss_pred             CCC---------CCCEEEEecCCCCC--c--------ccCHHHHHHHHHHHHhcCCccEEEEEec-CCccccccC----C
Q 037144          196 GID---------RKNIRAIKTTKSSS--Y--------GLSAESVLSQINLDVEAELIPLFLCATV-GTTAITAVD----P  251 (502)
Q Consensus       196 Glg---------~~~v~~v~~~~~~~--~--------~~d~~~Le~~i~~~~~~g~~p~~Vv~t~-gtt~~G~id----p  251 (502)
                      |-.         ...+..+|......  +        .-+++.+++.++.   .+..+.+|++.- .....|.+-    =
T Consensus       170 ~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~~~iAAvi~EP~iqg~gG~~~~~~~f  246 (460)
T PRK06916        170 AIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKE---KHEEIAAIIVEPLVQGAGGMITMPKGY  246 (460)
T ss_pred             CCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHh---CCCcEEEEEEeccccCCCCcccCCHHH
Confidence            321         01234444321000  0        1235666776652   223355666654 244456553    3


Q ss_pred             hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-cceEEEeeCchhhhhhhcCCccc
Q 037144          252 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-DCCCLWVKDPSCLLSTLSTNPQY  330 (502)
Q Consensus       252 l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~~~y  330 (502)
                      +++|.++|++||+.+++|.++.|+.....-+.....++ ..|.++++  |.++..+ +.|.++.++. . .+.+...  +
T Consensus       247 l~~lr~lc~~~g~llI~DEV~TG~GRtG~~~a~~~~gv-~PDiv~~g--K~l~gG~~Pi~av~~~~e-i-~~~~~~~--~  319 (460)
T PRK06916        247 LKGLRNLCTKYNVLFITDEVATGFGRTGKMFACEHENV-TPDIMTAG--KGLTGGYLPIAITVTTDE-I-YNAFYGD--Y  319 (460)
T ss_pred             HHHHHHHHHHcCCEEEeechhhCCCcCchhhHHHhcCC-CCCeeeee--hhhhcCccccceeeecHH-H-HHHhhcc--c
Confidence            88999999999999999999876533222111112244 58888874  8887663 6788877644 2 2223111  1


Q ss_pred             ccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC--Cee
Q 037144          331 LKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR--NFS  408 (502)
Q Consensus       331 l~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~--~~~  408 (502)
                      ...         ... ....|. .+.+.......++++.+..+   .+.++..++.++|++.|+++....++...  ...
T Consensus       320 ~~~---------~~~-~~~~T~-~gnpl~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl  385 (460)
T PRK06916        320 EEQ---------KTF-FHGHSY-TGNPLGCAVALANLELYEKT---NLIEQVARKTEYVATQLEDLFALKHVGDIRQLGL  385 (460)
T ss_pred             ccc---------Ccc-ccCCCC-CCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHhhcCCCeEEeecCCc
Confidence            000         000 000011 11122222333444444333   45677888888888888765222112111  112


Q ss_pred             EEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHH
Q 037144          409 LVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHV  488 (502)
Q Consensus       409 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di  488 (502)
                      ++.+.+......           .+    .. ... ......+...+.++|.++ .+.   + ..+|+... ...+++||
T Consensus       386 m~giel~~~~~~-----------~~----~~-~~~-~~~~~~i~~~~~~~Gvl~-~~~---g-~~l~~~Pp-l~it~~~i  442 (460)
T PRK06916        386 MVGIELVKNKET-----------KE----PF-EWT-ERVGVQVCKRSRELGMLT-RPL---G-NTIVFMPP-LASTIDEL  442 (460)
T ss_pred             eeeEEeeccccc-----------cc----CC-Cch-hhHHHHHHHHHHHCCeEE-Eec---C-CEEEEeCC-cccCHHHH
Confidence            333333221000           00    00 000 122456778888889654 221   2 47888753 45677899


Q ss_pred             HHHHHHHHHHHHh
Q 037144          489 RAAWTVVQEHLEA  501 (502)
Q Consensus       489 ~~~~~~l~~~~~~  501 (502)
                      +++++++.+.+++
T Consensus       443 d~~~~~l~~~l~~  455 (460)
T PRK06916        443 DEMLRILYKAISD  455 (460)
T ss_pred             HHHHHHHHHHHHh
Confidence            9999999988764

>PRK07483 hypothetical protein; Provisional

Probab=99.21  E-value=7.5e-08  Score=99.87  Aligned_cols=330  Identities=12%  Similarity=0.073  Sum_probs=170.1

Q ss_pred             HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEE-eCCCCchhHHHHHHH
Q 037144          116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVY-SSDQTHCAFQKAAQI  194 (502)
Q Consensus       116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~-~s~~~H~s~~~aa~~  194 (502)
                      +...++.+.|.+++.-..       ...+|++|||+|+-.|+..||.....+ +..  .+..|+ .....|-...-+..+
T Consensus        73 ~~~~~lae~L~~~~p~~~-------~~v~f~~sGsEAve~AlklAr~~~~~~-g~~--~r~~Ii~~~~~YHG~t~~a~s~  142 (443)
T PRK07483         73 EPAEALADRLVAAAPAGL-------EHVYFVSGGSEAVEAALKLARQYFVEI-GQP--QRRHFIARRQSYHGNTLGALAI  142 (443)
T ss_pred             HHHHHHHHHHHHhCCCCC-------CEEEEcCCcHHHHHHHHHHHHHHHHhc-CCC--CCcEEEEECCCcCCcCHHHhhh
Confidence            344456677777763211       157999999999999999999763221 211  233343 344455433323232


Q ss_pred             cCC---------CCCCEEEEecCCCCCccc-------------CHHHHHHHHHHHHhcCCccEEEEEecCCc-cccccCC
Q 037144          195 VGI---------DRKNIRAIKTTKSSSYGL-------------SAESVLSQINLDVEAELIPLFLCATVGTT-AITAVDP  251 (502)
Q Consensus       195 ~Gl---------g~~~v~~v~~~~~~~~~~-------------d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt-~~G~idp  251 (502)
                      .|-         +...+..+|...  .++-             .+++|++++...  ....+.+|++..... ..|.+-|
T Consensus       143 s~~~~~~~~~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~iAAvivEPiqg~~gG~~~~  218 (443)
T PRK07483        143 GGNAWRREPFAPLLIEAHHVSPCY--AYREQRAGESDEAYGQRLADELEAKILEL--GPDTVAAFVAETVVGATAGAVPP  218 (443)
T ss_pred             cCCcccccccCCCCCCCEEeCCCc--cccccccCCCHHHHHHHHHHHHHHHHHhc--CCCceEEEEEeCcccCcCCeEeC
Confidence            221         111233444221  0111             125566655421  112344555544332 2355544


Q ss_pred             ----hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-cceEEEeeCchhhhhhhcC
Q 037144          252 ----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-DCCCLWVKDPSCLLSTLST  326 (502)
Q Consensus       252 ----l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~  326 (502)
                          +++|.++|++||+.+++|..+.|+.....-+.....++ ..|.++++  |.++..+ +.|.++++++-  .+.+..
T Consensus       219 ~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~g--K~l~gG~~Pi~av~~~~~i--~~~~~~  293 (443)
T PRK07483        219 VPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLFACEEDGV-APDLVTIA--KGLGAGYQPIGAVLASDRI--YDAIAD  293 (443)
T ss_pred             CHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHHHHhhcCC-CCCeeeeh--hhhccCccccEEEEEcHHH--HHHHhc
Confidence                89999999999999999999877643222111111234 58988885  8887664 68888886542  223322


Q ss_pred             CcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEecCC
Q 037144          327 NPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD-KRFEVAFPR  405 (502)
Q Consensus       327 ~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~-~~~~l~~~~  405 (502)
                      ...++....               |. .+.+.......++++.+-+   .++.++..++.++|++.|+++ ....++...
T Consensus       294 ~~~~~~h~~---------------T~-~gnpl~~aaa~a~l~~i~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v  354 (443)
T PRK07483        294 GSGFFQHGH---------------TY-LGHATACAAALAVQRVIAE---DGLLANVRARGEQLRARLRERLGQHPHVGDI  354 (443)
T ss_pred             CCCccccCC---------------CC-CCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHhcCCCeeeE
Confidence            111111110               00 1111122233334444333   245667777778888777642 122222111


Q ss_pred             --CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEee-eECC--EEEEEEEecC
Q 037144          406 --NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHA-IVGG--IYVLRFAAGN  480 (502)
Q Consensus       406 --~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-~~~g--~~~lR~~~~~  480 (502)
                        ...++.+.+......           .    ...+.  -.+....+.+.+.++|.++.... ...+  ..++|++.. 
T Consensus       355 RG~Glm~gie~~~~~~~-----------~----~~~~~--~~~~~~~~~~~~~~~Gll~~~~~~~~~~~~~~~l~~~Pp-  416 (443)
T PRK07483        355 RGRGLFVGVELVADRAT-----------K----APFDP--ALKLHARIKREAMARGLMVYPMGGTIDGVRGDHVLLAPP-  416 (443)
T ss_pred             eecccEEEEEEeecccc-----------c----CCCCc--hhhHHHHHHHHHHHCCcEEEecCccccCCCCCEEEEECC-
Confidence              122344444221000           0    00000  01234567888888997643321 1111  247998753 


Q ss_pred             CCCcHHHHHHHHHHHHHHHHh
Q 037144          481 SMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       481 ~~t~~~di~~~~~~l~~~~~~  501 (502)
                      ...+++|||+++++|.+.+.+
T Consensus       417 L~it~~eid~~~~~l~~~l~~  437 (443)
T PRK07483        417 FIITAAQIDEIVERLGDAIDA  437 (443)
T ss_pred             CCCCHHHHHHHHHHHHHHHHH
Confidence            457888999999999987654

>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.21  E-value=3.1e-08  Score=103.20  Aligned_cols=329  Identities=11%  Similarity=0.019  Sum_probs=170.4

Q ss_pred             HHHHHHHHHHHHhcCCC---CccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHH
Q 037144          116 ELENIVMDWLGQMLDLP---KSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAA  192 (502)
Q Consensus       116 ~le~~~~~~l~~l~g~~---~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa  192 (502)
                      +...++.+.|.+++.-.   ...     ...+|+++||+||..|+..||.....+ +..+ +..+|......|-...-+.
T Consensus       107 ~~~~~lae~L~~~~p~~~~~~~~-----~~v~f~~sGSEAvE~AlKlAr~~~~~~-g~~~-r~~ii~~~~syHG~t~gal  179 (472)
T PRK08742        107 EPAVQLAEQLLAIAPRQDGRAPL-----SKVFYADNGSAGVEVALKMAFHYFHNR-GEHR-RTRFIALENGYHGETIGAL  179 (472)
T ss_pred             HHHHHHHHHHHHhCCCcccCCCC-----CEEEEeCCchHHHHHHHHHHHHHHHhc-CCCC-CcEEEEECCCcCCCchhhh
Confidence            34456777777776321   011     258999999999999999999864332 2111 2234444544554333333


Q ss_pred             HHcCCC---------CCCEEEEecCCCC--Ccc--------cCHHHHHHHHHHHHhcCCccEEEEEec-CCccccccC--
Q 037144          193 QIVGID---------RKNIRAIKTTKSS--SYG--------LSAESVLSQINLDVEAELIPLFLCATV-GTTAITAVD--  250 (502)
Q Consensus       193 ~~~Glg---------~~~v~~v~~~~~~--~~~--------~d~~~Le~~i~~~~~~g~~p~~Vv~t~-gtt~~G~id--  250 (502)
                      ...|..         ...+..+|.....  ...        -+++.+++.+..   .+..+.+|++.- .....|.+-  
T Consensus       180 s~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~iAAvI~EPviqg~gG~~~~p  256 (472)
T PRK08742        180 AVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYALQAADALQALFEQ---SPGEICALILEPRLQCAGGMRMHH  256 (472)
T ss_pred             hccCCcccccccCCCCCCCEEeCCCCccccccCCCHHHHHHHHHHHHHHHHHh---CCCceEEEEEccccccCCCcccCC
Confidence            332221         0123444432100  000        135667777652   223455666654 234446543  


Q ss_pred             --ChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-cceEEEeeCchhhhhhhcCC
Q 037144          251 --PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-DCCCLWVKDPSCLLSTLSTN  327 (502)
Q Consensus       251 --pl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~  327 (502)
                        =++++.++|++||+.+++|..+.|+.....-+.....++ ..|.++++  |.++..+ +.|.++++++-  .+.+...
T Consensus       257 ~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~a~e~~gv-~PDiv~~g--Kgl~gG~~Plaav~~~~ei--~~~~~~~  331 (472)
T PRK08742        257 PAYLRRARELCDAHGAFLIADEIATGFGRTGTLFACEQAGV-MPDLLCLS--KGLTGGFLPLSAVLATQQL--YDAFLDD  331 (472)
T ss_pred             HHHHHHHHHHHHHcCCEEEEechhhCCCCCccchHHHhcCC-CCCEEEEc--ccccCCCCCcceeeccHHH--HHHhhcc
Confidence              388999999999999999999877643322221112244 58999985  9887664 67787776442  2233211


Q ss_pred             c--ccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC
Q 037144          328 P--QYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR  405 (502)
Q Consensus       328 ~--~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~  405 (502)
                      .  ..+...               .|. .+.+....+..++++.+-++   +++++..++.++|.+.++.+....++...
T Consensus       332 ~~~~~~~h~---------------~T~-~gnpl~~Aaa~a~L~~i~~~---~l~~~~~~~g~~l~~~~~~~~~~~~i~dv  392 (472)
T PRK08742        332 SRERAFLHS---------------HSY-TGNPLACAAALATLDIFADD---DVIARNQPTAARMTQLAAQIGEHPHVADV  392 (472)
T ss_pred             CccCccCcC---------------CCC-CccHHHHHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHhcCCCeeeE
Confidence            0  000000               011 11122223333444444333   34555666666666655443222222111


Q ss_pred             --CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCC
Q 037144          406 --NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMT  483 (502)
Q Consensus       406 --~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t  483 (502)
                        ...++.+.+.......               +  ...........+.+++.++|.+.. +.   | .+||+... ...
T Consensus       393 RG~Gl~~giel~~~~~~~---------------~--~~~~~~~~~~~~~~~~~~~Gll~~-~~---g-~vi~~~Pp-L~i  449 (472)
T PRK08742        393 RQAGMVVAFELTRGGNKR---------------T--PFPPAARVGLHAYRAALARGVVLR-PL---G-DVLYWMPP-YCV  449 (472)
T ss_pred             eccceEEEEEeccCcccc---------------c--cCCchhHHHHHHHHHHHHCCeEEE-ec---C-CEEEEECC-CCC
Confidence              1223444443211000               0  000001233567777888896542 21   2 47999863 567


Q ss_pred             cHHHHHHHHHHHHHHHHh
Q 037144          484 MESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       484 ~~~di~~~~~~l~~~~~~  501 (502)
                      +++||+.+++.|.+..++
T Consensus       450 t~~ei~~~~~~l~~~l~~  467 (472)
T PRK08742        450 DEAQLALLADTTRHAIDE  467 (472)
T ss_pred             CHHHHHHHHHHHHHHHHH
Confidence            888999999999988764

>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional

Probab=99.21  E-value=3.2e-08  Score=102.97  Aligned_cols=328  Identities=12%  Similarity=0.048  Sum_probs=169.0

Q ss_pred             HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEE-eCCCCchhHHHHHH
Q 037144          115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVY-SSDQTHCAFQKAAQ  193 (502)
Q Consensus       115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~-~s~~~H~s~~~aa~  193 (502)
                      ++.+.++.+.|.+++......    ....++++|||+|+..|+..||...         ++..|+ .....|-...-+..
T Consensus       100 ~~~~~~lAe~L~~~~p~~~~~----~~~~f~~~SGsEAve~AlklAr~~t---------gr~~Ii~~~~~yHG~t~~als  166 (459)
T PRK06931        100 TPLKDAFSEYLLSLLPGQGKE----YCLQFTGPSGADAVEAAIKLAKTYT---------GRSNVISFSGGYHGMTHGALA  166 (459)
T ss_pred             CHHHHHHHHHHHHhCCCcccc----ceEEEeCCCcHHHHHHHHHHHHHhc---------CCCeEEEECCCcCCccHHHHh
Confidence            455566778888877432110    0023556899999999999998752         233344 34444543333333


Q ss_pred             HcCCC---------CCCEEEEecCCCCCc------ccCHHHHHHHHHHHHh----cCCccEEEEEecCCccccccCC---
Q 037144          194 IVGID---------RKNIRAIKTTKSSSY------GLSAESVLSQINLDVE----AELIPLFLCATVGTTAITAVDP---  251 (502)
Q Consensus       194 ~~Glg---------~~~v~~v~~~~~~~~------~~d~~~Le~~i~~~~~----~g~~p~~Vv~t~gtt~~G~idp---  251 (502)
                      +.|-.         ...+..+|....-..      .-+.+.+++.+.+...    ....+.+|++.-.....|.+-|   
T Consensus       167 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~  246 (459)
T PRK06931        167 VTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVE  246 (459)
T ss_pred             hcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHH
Confidence            32210         113445553310000      0134445444443322    1233556666554444566533   


Q ss_pred             -hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCccc
Q 037144          252 -LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQY  330 (502)
Q Consensus       252 -l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~y  330 (502)
                       +++|.++|++||+.+++|..+.|+.....-+..-..++ ..|.++++  |.++..++.|.+..++.  + +.+.  +..
T Consensus       247 yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a~~~~gv-~PDivt~g--K~l~gG~Pi~av~~~~~--~-~~~~--~~~  318 (459)
T PRK06931        247 WLQKIREVTQKHGILLIVDEVQAGFARTGKMFAFEHAGI-EPDIIVMS--KAVGGGLPLAVLGIKKE--F-DAWQ--PGG  318 (459)
T ss_pred             HHHHHHHHHHHcCCEEEEecchhcCCcCchHHHhhhcCC-CCCEEEec--ccccCCcceeeeeeHHH--H-hhcc--CCC
Confidence             89999999999999999999877643322111112244 58998885  88876677888776532  2 2331  111


Q ss_pred             ccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEecC--CCe
Q 037144          331 LKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD-KRFEVAFP--RNF  407 (502)
Q Consensus       331 l~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~-~~~~l~~~--~~~  407 (502)
                      ..+                 |+ .+.+..+....++++.+..+   ...++..++.++|.+.|+++ ....++..  -..
T Consensus       319 ~~~-----------------T~-~gnpla~aaala~L~~l~~~---~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~G  377 (459)
T PRK06931        319 HTG-----------------TF-RGNQLAMATGLTTLKILKEE---NLAQNAAERGEWLKAQLAELQKRYPCIGNVRGRG  377 (459)
T ss_pred             CCC-----------------CC-CCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHhCCCeEeEecCc
Confidence            100                 11 11122223333444444333   34566666777777776543 11111111  122


Q ss_pred             eEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHH
Q 037144          408 SLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESH  487 (502)
Q Consensus       408 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~d  487 (502)
                      .++.+.+......             .+.......+ .+....+.+.+.++|.++....  ....++|+... ...+++|
T Consensus       378 lm~giel~~~~~~-------------~~~~~~~~~~-~~~~~~~~~~~~~~Gvl~~~~~--~~~~~l~~~Pp-l~it~~e  440 (459)
T PRK06931        378 LMIGIEIVDERQP-------------ADAMGSYPAD-GELAAAIQKACFENGLLLERGG--RNGNVVRLLPP-LLITQAE  440 (459)
T ss_pred             eEEEEEEccCccc-------------ccccccCCcc-HHHHHHHHHHHHHCCcEEeecC--CCCCEEEEECC-CCcCHHH
Confidence            3445554321100             0000000000 1234567788888897543221  12357898864 4567789


Q ss_pred             HHHHHHHHHHHHHh
Q 037144          488 VRAAWTVVQEHLEA  501 (502)
Q Consensus       488 i~~~~~~l~~~~~~  501 (502)
                      ||++++++.+.+++
T Consensus       441 id~~~~~l~~~l~~  454 (459)
T PRK06931        441 CEEFIDRFEQALLA  454 (459)
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999887654

>TIGR03251 LAT_fam L-lysine 6-transaminase

Probab=99.16  E-value=5.3e-08  Score=100.77  Aligned_cols=292  Identities=11%  Similarity=0.020  Sum_probs=147.2

Q ss_pred             cEEEcCCchHHHHHHHHHHHHHHHH---HhCccCC-CCeEEEeCCCCchhHHHHHHHcCCC-CC----CE---EEEec--
Q 037144          142 GGVIQGTTCEALLCTLTAARDRVLK---KIGRENI-SKLVVYSSDQTHCAFQKAAQIVGID-RK----NI---RAIKT--  207 (502)
Q Consensus       142 ~g~~t~ggt~a~~~al~~a~~~~~~---~~~~~~~-~~~~v~~s~~~H~s~~~aa~~~Glg-~~----~v---~~v~~--  207 (502)
                      ..+|++|||+|+..|+..||...-+   ..|.... +..+|......|-...-+....|.. ..    ..   ..++.  
T Consensus       105 ~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~  184 (431)
T TIGR03251       105 HLFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPK  184 (431)
T ss_pred             EEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCc
Confidence            5799999999999999999875211   0111000 1234444544564433333333321 00    00   00111  


Q ss_pred             -----CCCC-C--c---ccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc----CChhHHHHHHHHhCCEEEeeccc
Q 037144          208 -----TKSS-S--Y---GLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV----DPLKPLCDVAKQFGIWVHVDAAY  272 (502)
Q Consensus       208 -----~~~~-~--~---~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i----dpl~eI~~i~~~~g~~lhVDaA~  272 (502)
                           +... .  .   .-+++++++.+..   .+..+.+|++.......|.+    +.+++|.++|++||+.+++|.++
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~  261 (431)
T TIGR03251       185 LTFPLDAPNLDQVIALEEEALRQARAAFAE---RPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQ  261 (431)
T ss_pred             ccCCccccccchhhHHHHHHHHHHHHHHHh---CCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecch
Confidence                 0000 0  0   0123444445542   23456777777655566765    56999999999999999999999


Q ss_pred             ccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCch-hhhh-hhcCCcccccCccCCCCCcccccCCCcc
Q 037144          273 AGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPS-CLLS-TLSTNPQYLKNEATDQEPKEQEVGYKDW  350 (502)
Q Consensus       273 g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~-~l~~-~~~~~~~yl~~~~~~~~~~~~~~~~~~~  350 (502)
                      .|+-....-+.....++ ..|.++++  |.+  | .+|++ .+++- .... .+. .+....                 .
T Consensus       262 tG~GrtG~~~a~~~~gv-~PDi~~~g--K~~--~-~~g~~-~~~~i~~~~~~~~~-~~~~~~-----------------~  316 (431)
T TIGR03251       262 TGVGLTGTAWAYQQLGV-QPDIVAFG--KKT--Q-VCGIM-AGRRVDEVADNVFA-VPSRLN-----------------S  316 (431)
T ss_pred             hccCccchHHHHHhcCC-CCCEEEec--ccC--c-cceEE-ecchHHHhhhhccc-CccccC-----------------C
Confidence            86543211111111234 68988865  654  3 24444 43321 1110 110 000000                 0


Q ss_pred             cccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEecCCCeeEEEEEeecCcchhhhhhc
Q 037144          351 QITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTS----DKRFEVAFPRNFSLVCFRVTPSAVMDKLRTK  426 (502)
Q Consensus       351 ~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~----~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~  426 (502)
                      |+ ++.+....+..++++.+..++   ..++..++.++|.+.|++    .+++..-......++.+.+.+          
T Consensus       317 T~-~gnpl~~aaa~a~L~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~~~~----------  382 (431)
T TIGR03251       317 TW-GGNLVDMVRATRILEIIEEER---LVDNARVQGAHLLARLHELAAEFPHLVSNPRGRGLMCAFDLPS----------  382 (431)
T ss_pred             CC-CCCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHhCccceecccccceeEEEEeCC----------
Confidence            11 111222233344555543333   334455556666655544    332211111223344555532          


Q ss_pred             ccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144          427 YKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEH  498 (502)
Q Consensus       427 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~  498 (502)
                                        ......+.+.+.++|.++ .+   .+...+|++.. ...+++||++++++|.++
T Consensus       383 ------------------~~~~~~~~~~l~~~Gvl~-~~---~g~~~lr~~P~-l~~t~~eid~~l~~l~~~  431 (431)
T TIGR03251       383 ------------------TADRDEVIRQLYREGVLL-LG---CGERSIRFRPP-LTVTREEIDAAIDAIRRV  431 (431)
T ss_pred             ------------------HHHHHHHHHHHHhCCeEE-ec---CCCCeEEEECC-ccCCHHHHHHHHHHHHhC
Confidence                              122456778888888654 22   12356899874 557788999999998763

Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.

>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional

Probab=99.15  E-value=1.9e-08  Score=104.10  Aligned_cols=172  Identities=13%  Similarity=-0.005  Sum_probs=97.4

Q ss_pred             HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeC-CCCchhHHHH---
Q 037144          116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSS-DQTHCAFQKA---  191 (502)
Q Consensus       116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s-~~~H~s~~~a---  191 (502)
                      ..+.++.+.|.+++...+        ..+|+++||+|+..|+..||...         ++..|+.. ..++.++...   
T Consensus        88 ~~~~~la~~l~~~~p~~~--------~v~f~~sGseA~e~AlklAr~~t---------gr~~i~~~~~~~~h~~~~~~~g  150 (431)
T PRK06209         88 AIELDAAESFLELIDGAD--------MVKFCKNGSDATSAAVRLARAYT---------GRDLVARCADHPFFSTDDWFIG  150 (431)
T ss_pred             HHHHHHHHHHHHhCCccc--------eEEEecCHHHHHHHHHHHHHHHh---------CCCeEEEeccCccccccccccc
Confidence            345566778888763211        57999999999999999998752         23333332 1221111111   


Q ss_pred             HHH--cCCCCCCE-EEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEe
Q 037144          192 AQI--VGIDRKNI-RAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHV  268 (502)
Q Consensus       192 a~~--~Glg~~~v-~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhV  268 (502)
                      ...  .|.....+ ..+...     .-|+++|++++++.   +..+.+|++.......+..+++++|.++|++||+.+++
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~-----~~d~~~l~~~l~~~---~~~~aavi~Epv~g~~~~~~~l~~l~~lc~~~g~lLI~  222 (431)
T PRK06209        151 TTPMSAGIPASVSALTVTFR-----YNDIASLEALFEDH---PGRIACVILEPATADEPQDGFLHEVRRLCHENGALFIL  222 (431)
T ss_pred             cCCCCCCCChhHhccccccC-----CCCHHHHHHHHHhC---CCCEEEEEEccccCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence            000  01100000 011111     22889999998642   12344555544333334445599999999999999999


Q ss_pred             ecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeC
Q 037144          269 DAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKD  316 (502)
Q Consensus       269 DaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~  316 (502)
                      |.++.|+... .......-++ ..|.+++  .|.++..+..|.++.++
T Consensus       223 DEv~tG~~~~-~~g~~~~~gv-~PDi~t~--gK~lggG~p~~av~~~~  266 (431)
T PRK06209        223 DEMITGFRWH-MRGAQKLYGI-VPDLSCF--GKALGNGFAVSALAGKR  266 (431)
T ss_pred             EcccccCCcC-cchhhHHhCC-Ccceeee--hhhhcCCcccEEEEEHH
Confidence            9998665321 1001111233 4687665  59988656677777753

>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]

Probab=99.14  E-value=1.1e-08  Score=98.85  Aligned_cols=304  Identities=13%  Similarity=0.070  Sum_probs=174.6

Q ss_pred             ChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEE-cCCchHHHHHHHHHHHHHHHHHhCccCCCCe-EEEeCCCCchhH
Q 037144          111 SPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVI-QGTTCEALLCTLTAARDRVLKKIGRENISKL-VVYSSDQTHCAF  188 (502)
Q Consensus       111 ~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~-t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~-~v~~s~~~H~s~  188 (502)
                      +..+..+-.++.+.++++++.|+++      .+.| .+|+|...-++.+.....          .+. -|....-+..+.
T Consensus        45 sk~~~~v~~~a~~~lreLl~iPd~Y------~VlflqGGat~qf~~~p~nLl~~----------~~~~yv~~g~Ws~~a~  108 (365)
T COG1932          45 SKEFKNVLEEAEKDLRELLNIPDDY------KVLFLQGGATGQFAMAPMNLLGK----------RGTDYVDTGAWSEFAI  108 (365)
T ss_pred             cHHHHHHHHHHHHHHHHHhCCCCCc------eEEEEcCccHHHHHHHHHhhhcc----------cCceeEeeeehhHhHH
Confidence            4456667778899999999999886      4544 555555443333333221          111 122222222233


Q ss_pred             HHHHHHcCCCCCCEEEEecCCCC-CcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC-ChhHHHHHHHHhCCEE
Q 037144          189 QKAAQIVGIDRKNIRAIKTTKSS-SYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD-PLKPLCDVAKQFGIWV  266 (502)
Q Consensus       189 ~~aa~~~Glg~~~v~~v~~~~~~-~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id-pl~eI~~i~~~~g~~l  266 (502)
                      ..+ +.++-. -++..+.....+ ..-.+++..+  +.++.      .+|..+...|.+|+-- +...+..     +..+
T Consensus       109 ~eA-~~~~~~-~~~~~~~~~~~~~~~iP~~~~~~--~~~~~------ayv~~~~NeTi~Gv~v~~~p~~~~-----~~~~  173 (365)
T COG1932         109 KEA-KKVGKQ-PKLIDARIEEAGYGSIPDLSKWD--FSDND------AYVHFCWNETISGVEVPELPDIGS-----DGLL  173 (365)
T ss_pred             HHH-HHhccc-ccccccceeccCccCCCChhhcc--cCCCc------cEEEEecCCcccceEccCCCCCCC-----CceE
Confidence            333 334420 022222211111 1233444333  22221      2799999999999853 3333332     2789


Q ss_pred             EeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcC-CcccccCccCCCCCccccc
Q 037144          267 HVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLST-NPQYLKNEATDQEPKEQEV  345 (502)
Q Consensus       267 hVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~  345 (502)
                      ++|++.+.+....|        +++.|.|.++.+|.++ |-|.+++++|+... .+.-+. .|.-+              
T Consensus       174 v~D~SS~ilsr~iD--------vsk~dviyagaQKnlG-paGltvvIvr~~~l-~r~~~~~~P~if--------------  229 (365)
T COG1932         174 VADASSAILSRPID--------VSKYDVIYAGAQKNLG-PAGLTVVIVRPDLL-ERAESYTLPSIF--------------  229 (365)
T ss_pred             EEecccHHhcCCCC--------hhHcceEEEehhhccC-ccceEEEEEcHHHH-hcccccCCchHh--------------
Confidence            99998777666554        3388999999999986 66788888886543 222111 11111              


Q ss_pred             CCCcccccCCCCC--CchHHH---HHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE-ecC---CCeeEEEEEee
Q 037144          346 GYKDWQITLCRRF--RSLKLW---VVIRNF-GVANLRNFIRSHVGMAKLFERLVTSDKRFEV-AFP---RNFSLVCFRVT  415 (502)
Q Consensus       346 ~~~~~~~~~sr~~--~al~~~---~~l~~~-g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l-~~~---~~~~~v~f~~~  415 (502)
                      ++.......|.-.  ..+.++   ..++.+ ..-|++++.++..+.++.|.+.+.+. +|.. ...   .....|||.+.
T Consensus       230 ~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s-~fy~~~v~~~~RS~mnV~f~~~  308 (365)
T COG1932         230 DYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKS-DFYRNLVAKANRSRMNVTFTLV  308 (365)
T ss_pred             hchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhC-CccccccchhhccceeEEEEcC
Confidence            1110011111110  112332   233333 45578899999999999999999987 4543 111   12346788876


Q ss_pred             cCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHH
Q 037144          416 PSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVV  495 (502)
Q Consensus       416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l  495 (502)
                      .                            .++.+.+.+++.++|.+...+.  +-.+-+|+++-|. .+.++++.|++-+
T Consensus       309 ~----------------------------~~ld~~fv~eae~~gl~~lkGh--r~vgGmRasiynA-~~~e~veaL~~fm  357 (365)
T COG1932         309 D----------------------------AELDKGFVAEAEAAGLIYLKGH--RSVGGLRASIYNA-VPLEDVEALTDFM  357 (365)
T ss_pred             c----------------------------HHHHHHHHHHHHHcCCceeccc--cCCCceeeeeecC-CCHHHHHHHHHHH
Confidence            4                            4567788888888898776663  2233499998655 4556999999999


Q ss_pred             HHHHHh
Q 037144          496 QEHLEA  501 (502)
Q Consensus       496 ~~~~~~  501 (502)
                      +...++
T Consensus       358 ~~f~~~  363 (365)
T COG1932         358 DWFEET  363 (365)
T ss_pred             HHHHHh
Confidence            887654

>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]

Probab=99.12  E-value=1.2e-08  Score=95.02  Aligned_cols=318  Identities=10%  Similarity=0.086  Sum_probs=169.6

Q ss_pred             CCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeC-C
Q 037144          104 VGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSS-D  182 (502)
Q Consensus       104 ~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s-~  182 (502)
                      +.+.|....+-..+-+.+...+.+.+|+.-+.     ....+|+|+..+.++.....-    .+ ..+|..+- |+.+ .
T Consensus        66 ~~cnY~~pQG~~~li~ala~~l~~~ygwnit~-----~NIalTnGSQs~fFYlfNlF~----G~-~sdG~~k~-illPLa  134 (417)
T COG3977          66 ALCNYDGPQGKAVLIDALAKMLRREYGWNITA-----QNIALTNGSQSAFFYLFNLFA----GR-RSDGTEKK-ILLPLA  134 (417)
T ss_pred             HHhcCCCCcchhHHHHHHHHHHHHHhCCCCcc-----ceeeecCCccchHHHHHHHhc----Cc-cCCCccee-EeeccC
Confidence            34556666666778888999999999996442     267888887666655433211    11 12222222 2222 1


Q ss_pred             CCchhHHHHHHHcCCCCCCEEEEe----cCCCC--CcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc---CChh
Q 037144          183 QTHCAFQKAAQIVGIDRKNIRAIK----TTKSS--SYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV---DPLK  253 (502)
Q Consensus       183 ~~H~s~~~aa~~~Glg~~~v~~v~----~~~~~--~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i---dpl~  253 (502)
                      +.+..+..    .|+-.+.++...    ..+.+  .+++|.++|+-  .+.+      -+|+++-+||+||.+   +++.
T Consensus       135 PeYiGY~d----~~l~~d~fVs~kP~iel~~~g~FKY~vDF~~l~i--~e~~------g~ic~SRPtNPTGNVlTdeE~~  202 (417)
T COG3977         135 PEYIGYAD----AGLEEDLFVSAKPNIELLPAGQFKYHVDFEHLHI--GEST------GAICVSRPTNPTGNVLTDEELA  202 (417)
T ss_pred             hhhccccc----cccCccceeeccCCcccccccceeeccCHHHccc--cccc------ceEEecCCCCCCCCcccHHHHH
Confidence            12211111    111111222221    11112  36778877753  2333      389999999999998   6788


Q ss_pred             HHHHHHHHhCCEEEeeccccccccc--CccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccc
Q 037144          254 PLCDVAKQFGIWVHVDAAYAGSACI--CPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYL  331 (502)
Q Consensus       254 eI~~i~~~~g~~lhVDaA~g~~~~~--~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl  331 (502)
                      +|.++|++||+.+++|-|||..+=.  +.+....+.   .--.++.+.+|.+.....||+++.. .+.. ++++....-+
T Consensus       203 kldalA~~~giPliIDnAYg~PFP~iifsd~~~~w~---~NiilC~SLSK~GLPG~R~GIiIan-e~vi-qaitnmn~ii  277 (417)
T COG3977         203 KLDALARQHGIPLIIDNAYGVPFPGIIFSDATPLWN---ENIILCMSLSKLGLPGSRCGIIIAN-EKVI-QAITNMNGII  277 (417)
T ss_pred             HHHHHhhhcCCcEEEecccCCCCCceecccccccCC---CCEEEEeehhhcCCCCcceeEEEcc-HHHH-HHHHhcccee
Confidence            9999999999999999999764311  111111111   2225788899987766778887654 4332 2332221111


Q ss_pred             cCccCCCCCcccccCCCcccccCCCCCCchHHHH----HHHHhcHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEE-ecCC
Q 037144          332 KNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWV----VIRNFGVANLRNFIRSHVGMAKLFERLVTS-DKRFEV-AFPR  405 (502)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~----~l~~~g~~g~~~~~~~~~~la~~l~~~l~~-~~~~~l-~~~~  405 (502)
                      .                   +.-+|-..|++.-+    .+..+..+-++-.   +.+.++.....|++ +|...+ +..|
T Consensus       278 s-------------------Lap~~~G~Aia~~mie~gdl~rlseqVIrPF---Y~~~~q~~~~~l~~~lp~~~~~iHkp  335 (417)
T COG3977         278 S-------------------LAPGRMGPAIAAEMIESGDLLRLSEQVIRPF---YRNRVQTTIAILRRYLPEYRCLIHKP  335 (417)
T ss_pred             e-------------------ecCCCccHHHHHHHhhcchHHHHHHHhhhHH---HHHHHHHHHHHHHHhcCccceeeecC
Confidence            1                   11111111211110    0111111111111   22222333333322 333332 3467


Q ss_pred             CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeE---------CCEEEEEE
Q 037144          406 NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIV---------GGIYVLRF  476 (502)
Q Consensus       406 ~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~---------~g~~~lR~  476 (502)
                      +..++.|-.-..                          +.-...+|+++|.++|.+++++..+         +...++|+
T Consensus       336 EGAIFlWLWf~d--------------------------LPItt~~LYq~LKa~Gvl~VPG~~FFpGl~~ewpH~hqC~Rm  389 (417)
T COG3977         336 EGAIFLWLWFKD--------------------------LPITTEELYQRLKARGVLMVPGHYFFPGLDKEWPHTHQCMRM  389 (417)
T ss_pred             Ccceeehhhhcc--------------------------CCCCHHHHHHHHHhCeEEEecccccCCCCCCCCCCccceEEE
Confidence            777765533211                          0111468899999999987776554         23569999


Q ss_pred             EecCCCCcHHHHHHHHHHHHHHHH
Q 037144          477 AAGNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       477 ~~~~~~t~~~di~~~~~~l~~~~~  500 (502)
                      +..   -+++.|+.-++.|.+..+
T Consensus       390 n~~---~~~~~ie~Gva~lae~ve  410 (417)
T COG3977         390 NYV---PEPEKIEKGVAILAEEVE  410 (417)
T ss_pred             ecC---CCHHHHHHHHHHHHHHHH
Confidence            875   356688888888876654

>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]

Probab=99.07  E-value=2e-07  Score=90.27  Aligned_cols=291  Identities=12%  Similarity=0.013  Sum_probs=160.9

Q ss_pred             cEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCC-eEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCC----------
Q 037144          142 GGVIQGTTCEALLCTLTAARDRVLKKIGRENISK-LVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKS----------  210 (502)
Q Consensus       142 ~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~-~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~----------  210 (502)
                      ..+|++||||||-+||+.||...         .. +.|-.....|-+-.-++.+.|+   ..+.-+.+..          
T Consensus       111 ~vfF~nsGsEANelal~mar~Yt---------~~~diIa~r~~YHG~t~~t~glt~~---~~~k~~~~~~~~~~~~~~~P  178 (442)
T KOG1404|consen  111 VVFFVNSGSEANELALKMARLYT---------GNLDIIARRNSYHGNTLYTLGLTGL---SPWKQNFPGVASGVHHTMNP  178 (442)
T ss_pred             EEEEecCCchHHHHHHHHHHHhc---------CCceEEEeeccccCCchhhcccccC---CcccccCCCCCCcccccCCC
Confidence            58999999999999999999863         22 3333444456555555565555   3332221100          


Q ss_pred             ----CCcccC-----H----HHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHHHHHhCCEEEeecccc
Q 037144          211 ----SSYGLS-----A----ESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDVAKQFGIWVHVDAAYA  273 (502)
Q Consensus       211 ----~~~~~d-----~----~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~~~~g~~lhVDaA~g  273 (502)
                          +-+.=+     -    ++|+..|.....  ..+...++..-....|.+.+    +++..++|+++|..++.|.++.
T Consensus       179 dp~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~--~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqt  256 (442)
T KOG1404|consen  179 DPYRGIFGGSNEEEASDRYAKELEDLILYDGP--ETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQT  256 (442)
T ss_pred             CcccccCCCCchhhhHHHHHHHHHHHHHhcCC--CceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhh
Confidence                000101     2    334444443322  22445555554445587865    8899999999999999999998


Q ss_pred             cccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCccccc
Q 037144          274 GSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQIT  353 (502)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~  353 (502)
                      |+....--+..--.++ .-|.+|..  |.++.....|.+++..+ + .+.+.....|....                   
T Consensus       257 GfGRtG~~wgfe~h~v-~PDIvTmA--KgiGnG~Pl~AVvtt~E-I-a~v~~~~~~~fnTy-------------------  312 (442)
T KOG1404|consen  257 GFGRTGHMWGFESHGV-VPDIVTMA--KGIGNGFPLGAVVTTPE-I-ADVLNQKSSHFNTY-------------------  312 (442)
T ss_pred             ccccccccccccccCC-CccHHHHH--hhccCCCcceeeecCHH-H-HHHHHhcccccccc-------------------
Confidence            8754431111001111 34666654  98987788888887544 2 23343333233221                   


Q ss_pred             CCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEecCCC--eeEEEEEeecCcchhhhhhcccCC
Q 037144          354 LCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD-KRFEVAFPRN--FSLVCFRVTPSAVMDKLRTKYKNG  430 (502)
Q Consensus       354 ~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~-~~~~l~~~~~--~~~v~f~~~~~~~~~~~~~~~~~~  430 (502)
                      .+.+..+....+.++.+-+   +++.++..+...||.+.|.++ .+.++++..+  .-++-..+.....+..|       
T Consensus       313 ggnP~a~avg~aVL~Vike---e~LqE~aa~vG~yl~~~l~~l~d~h~iIGdVRG~GLm~GvE~V~dk~~~~p-------  382 (442)
T KOG1404|consen  313 GGNPVACAVGLAVLKVIKE---ENLQENAAEVGSYLLEKLAALKDKHPIIGDVRGRGLMLGVELVSDKSEPKP-------  382 (442)
T ss_pred             CCCchhHHHHHHHHHHHHH---HhHHHHHHHHHHHHHHHHHHHhhcCCceeecccceeEEEEEEecccCCCCC-------
Confidence            1112222222334444333   567778888999999999775 3456665433  12333333322100000       


Q ss_pred             CcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHH
Q 037144          431 TYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVV  495 (502)
Q Consensus       431 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l  495 (502)
                              -+    ......+-+...+.|.. +.-+.+.|. ++|++.- .-.|.+|||.+++..
T Consensus       383 --------p~----~~~~~~i~~~cke~Gvl-vg~g~i~G~-vfriaPP-lciT~edi~f~~~~~  432 (442)
T KOG1404|consen  383 --------PA----TAEGAVIGEQCKELGVL-VGKGGIHGN-VFRIAPP-LCITKEDIDFAVEYF  432 (442)
T ss_pred             --------cc----hHHHHHHHHHHHHhCee-eecccccce-EEEecCC-eeccHHHHHHHHHHH
Confidence                    01    12234555666666864 455556666 8999863 235667998887744

>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]

Probab=99.02  E-value=3.6e-07  Score=92.25  Aligned_cols=321  Identities=11%  Similarity=0.063  Sum_probs=167.3

Q ss_pred             HHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEe-CCCCchhHHHHHHHcCCC-
Q 037144          121 VMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYS-SDQTHCAFQKAAQIVGID-  198 (502)
Q Consensus       121 ~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~-s~~~H~s~~~aa~~~Glg-  198 (502)
                      +.+.|+++..-. ..     ..++|++|||+|+-+|++.+++.+..+ |..  ++-+++. ....|-+-.-+..+.|.. 
T Consensus        92 LA~~L~~~aP~~-~l-----~~vFf~~sGSeAvEtAlKma~qY~~~~-G~p--~r~~~Isr~~gYHG~T~ga~Sv~g~~~  162 (449)
T COG0161          92 LAEKLAELAPEG-GL-----DHVFFTDSGSEAVETALKMALQYWRAR-GQP--QRKKFISRRNGYHGDTLGAMSVGGPVA  162 (449)
T ss_pred             HHHHHHHhCCCC-Cc-----cEEEEeCCchHHHHHHHHHHHHHHHhc-CCC--cceEEEEeccCcCcccchheeccCchh
Confidence            445667776411 01     258999999999999999999876543 221  1323333 333454444444444421 


Q ss_pred             ---------CCCEEEEecCC---CC-Ccc------cCHHHHHHHHHHHHhcCCccEEEEEec-CCccccccCC----hhH
Q 037144          199 ---------RKNIRAIKTTK---SS-SYG------LSAESVLSQINLDVEAELIPLFLCATV-GTTAITAVDP----LKP  254 (502)
Q Consensus       199 ---------~~~v~~v~~~~---~~-~~~------~d~~~Le~~i~~~~~~g~~p~~Vv~t~-gtt~~G~idp----l~e  254 (502)
                               ...+..+|...   .. .+.      -..++||+.|.+...  .....+++-- .....|.+-|    +++
T Consensus       163 ~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~g~--~~IAAfI~EPv~g~agG~~~pp~~Yl~~  240 (449)
T COG0161         163 LRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEHGP--ETIAAFIVEPVVGGAGGMLVPPPGYLKR  240 (449)
T ss_pred             hhhhhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhcCc--ccEEEEEecccccccCCcccCChHHHHH
Confidence                     11223343321   00 011      224556666654321  3344454443 2333566644    899


Q ss_pred             HHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCC-ccccc
Q 037144          255 LCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTN-PQYLK  332 (502)
Q Consensus       255 I~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~-~~yl~  332 (502)
                      +.+||++||+.|+.|..-.|+--...-+..--.++ .-|.++++  |.+... .+.|.+++.++-  .+.+... ..-+.
T Consensus       241 vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi-~PDi~~~a--KGLT~GY~Pl~a~l~~~~I--~~~~~~~~~~~f~  315 (449)
T COG0161         241 VREICDKYGILLIADEVATGFGRTGKMFACEHAGI-VPDILCLA--KGLTGGYLPLSAVLTSDRI--YEAFSDGDAGAFM  315 (449)
T ss_pred             HHHHHHHcCcEEEeecceeCCCcCchhhhhhhcCC-CCCeeeec--ccccccchhhHhHhhhHHH--HHHHhcccCCeec
Confidence            99999999999999998766543222111111122 57888877  777422 335666665442  2333222 11111


Q ss_pred             CccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEecCC-CeeE-
Q 037144          333 NEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTS-DKRFEVAFPR-NFSL-  409 (502)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~-~~~~~l~~~~-~~~~-  409 (502)
                      +.                   .+-...+++..+++..+..---+.++++..++..+|.+.|++ +++...+... ..++ 
T Consensus       316 HG-------------------~TYsghPlacAaAla~L~i~e~e~l~~~~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gli  376 (449)
T COG0161         316 HG-------------------HTYSGNPLACAAALANLDILEEEDLLERVAEIGAYLQAGLQAALADHPLVGDVRGLGLI  376 (449)
T ss_pred             cC-------------------CccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcccCCcEEEeeccceE
Confidence            11                   111123454445554432222234556666888888888886 4433344332 2333 


Q ss_pred             EEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHH
Q 037144          410 VCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVR  489 (502)
Q Consensus       410 v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~  489 (502)
                      ..+.+..+.-.                 . ... ..+...++.+...++|.+ +.+.   |. .+=++. -+-.++++|+
T Consensus       377 ~~iElv~d~~t-----------------~-~~f-~~~~~~~~~~~~~e~Gl~-iRp~---g~-~i~~~P-Pliit~~eid  431 (449)
T COG0161         377 GAIELVADKAT-----------------K-TPF-EARVGARVRAAALERGLL-IRPL---GD-VIYLMP-PLIITREEID  431 (449)
T ss_pred             EEEEEeccccc-----------------c-cch-hhhHHHHHHHHHHHCCeE-Eeec---CC-EEEEcC-CccCCHHHHH
Confidence            34444432100                 0 000 134456777888888964 3332   22 333332 2346788999


Q ss_pred             HHHHHHHHHHHh
Q 037144          490 AAWTVVQEHLEA  501 (502)
Q Consensus       490 ~~~~~l~~~~~~  501 (502)
                      ++++.+.+.+++
T Consensus       432 ~l~~~l~~al~~  443 (449)
T COG0161         432 ELVDALREALDE  443 (449)
T ss_pred             HHHHHHHHHHHH
Confidence            999999987763

>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]

Probab=98.93  E-value=8.2e-08  Score=87.91  Aligned_cols=277  Identities=11%  Similarity=0.042  Sum_probs=158.0

Q ss_pred             EEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHH
Q 037144          143 GVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLS  222 (502)
Q Consensus       143 g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~  222 (502)
                      ..+--|+-|.+-.-+.+.+..          ++..|+...+++.-+.-.|.+-++   .|+.+|.++  +|.|+.+++.+
T Consensus        89 ic~GvGsDE~ID~iiR~~c~P----------GkeKIl~cPPtysMY~v~A~iNd~---eVvkvpl~p--dF~lnvdai~e  153 (375)
T KOG0633|consen   89 ICVGVGSDELIDLIIRCVCDP----------GKEKILDCPPTYSMYVVDAAINDA---EVVKVPLNP--DFSLNVDAIAE  153 (375)
T ss_pred             eEEecCcHHHHHHHHhheecC----------CccceeecCCcceeEEEEeecCCc---eEEEecCCC--CccccHHHHHH
Confidence            344344445554444444432          335666666665433334567788   999999987  69999999999


Q ss_pred             HHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh-CCEEEeecccccccccCccchhhhcCCCCCCee-EEccC
Q 037144          223 QINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF-GIWVHVDAAYAGSACICPEFRHFIDGVECVDSF-SFNPH  300 (502)
Q Consensus       223 ~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~-g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi-~~~~h  300 (502)
                      .++.+.+    |.++.+|.+.|++|.+-..+.|-+|.+-- +..++||.||--+.-...... ++.-  --..+ .-.++
T Consensus       154 vl~~ds~----iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAYidFsg~~S~~~-lV~k--YpNLivlqTlS  226 (375)
T KOG0633|consen  154 VLELDSK----IKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAYIDFSGVESRMK-LVKK--YPNLIVLQTLS  226 (375)
T ss_pred             HHhcccc----ceEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeeeEeeccccccch-HhHh--CCceeehhhhh
Confidence            9877643    67999999999999997777777777643 688999999844432111111 1110  11122 23466


Q ss_pred             CcCC-CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh---cHHHHH
Q 037144          301 KWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF---GVANLR  376 (502)
Q Consensus       301 K~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---g~~g~~  376 (502)
                      |.++ +....|+-+.. .....-.....++|--+.                          +.--+++.++   ..+.++
T Consensus       227 KsfGLAGiRvG~~~~~-~~ia~iln~~KaPYNiS~--------------------------~~s~~AL~Als~~n~kkme  279 (375)
T KOG0633|consen  227 KSFGLAGIRVGYGAFP-LSIAEILNRAKAPYNISV--------------------------AGSVAALAALSDSNGKKME  279 (375)
T ss_pred             hhcCcceeEeeccccc-HHHHHHHHhccCCccccc--------------------------hhHHHHHHhcCcccchHHH
Confidence            7765 33334443332 122221223334442211                          1112233333   223345


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCeE-EecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHH
Q 037144          377 NFIRSHVGMAKLFERLVTSDKRFE-VAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESI  455 (502)
Q Consensus       377 ~~~~~~~~la~~l~~~l~~~~~~~-l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l  455 (502)
                      ...+...+-+.+|...|.++|++. .++....+++.+++.+.+                          +...+.++.++
T Consensus       280 ~~rdaiv~er~RL~keLt~v~~~~~~~gg~daNFiLi~v~~~~--------------------------n~~akkly~q~  333 (375)
T KOG0633|consen  280 DVRDAIVRERERLFKELTEVPFLNDYPGGSDANFILIEVTGGD--------------------------NGMAKKLYKQD  333 (375)
T ss_pred             HHHHHHHHHHHHHHHHhhcCccccCCCCcccccEEEEEEcCCC--------------------------cHHHHHHHHHH
Confidence            555556666778888888887765 234556778877776432                          33445555544


Q ss_pred             H-hcCcEEEEeeeE-CCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144          456 N-VSGKVFMTHAIV-GGIYVLRFAAGNSMTMESHVRAAWTVVQEH  498 (502)
Q Consensus       456 ~-~~g~~~~~~~~~-~g~~~lR~~~~~~~t~~~di~~~~~~l~~~  498 (502)
                      . +.|.++-..+.- .-.+++|++++    ++|+-+-+++.+++.
T Consensus       334 at~~gVvVRfrgse~~c~G~lRitvG----t~EentvL~k~~K~~  374 (375)
T KOG0633|consen  334 ATKMGVVVRFRGSEEGCKGYLRITVG----TPEENTVLMKCLKQF  374 (375)
T ss_pred             HHhcceEEEEcCCccccceeEEEEcC----CcccchHHHHHHHhh
Confidence            4 446543333222 23789999987    334667777776653

>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]

Probab=98.92  E-value=5.8e-07  Score=85.17  Aligned_cols=298  Identities=14%  Similarity=0.158  Sum_probs=162.5

Q ss_pred             HHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHH-------
Q 037144          120 IVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAA-------  192 (502)
Q Consensus       120 ~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa-------  192 (502)
                      +..+.+.++||++.         .+=+.+|.||+-.|+..||.|.....+-...+..++.+-...|-...-+.       
T Consensus       105 ~f~~~vt~lf~~~k---------vlpmnTGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~d  175 (427)
T KOG1402|consen  105 EFAEYVTKLFGYDK---------VLPMNTGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPD  175 (427)
T ss_pred             HHHHHHHHhcCcce---------eeecccchhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcc
Confidence            34466788888864         44466779999999999998755432211111222222233342111110       


Q ss_pred             HHcCCCCC---CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHHHHHhCCE
Q 037144          193 QIVGIDRK---NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDVAKQFGIW  265 (502)
Q Consensus       193 ~~~Glg~~---~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~~~~g~~  265 (502)
                      ...|.|.-   .+..||.+       |.++|+.+|+...     ...+++.--....|.+-|    |++..++|.+|+++
T Consensus       176 s~~~fgp~~P~~~~~v~Y~-------d~eale~~l~~~~-----vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl  243 (427)
T KOG1402|consen  176 SWDGFGPFLPGVVDKVPYG-------DAEALEVALKSPN-----VAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVL  243 (427)
T ss_pred             hhhccCCCCCCcceeeccC-------CHHHHHHHhcCCC-----eeEEEeeccccccceEeCCchhHHHHHHHHHhhcEE
Confidence            12222211   25555543       8899999997632     112333333445677644    89999999999999


Q ss_pred             EEeecccccccc----cCccchhhhcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCC
Q 037144          266 VHVDAAYAGSAC----ICPEFRHFIDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEP  340 (502)
Q Consensus       266 lhVDaA~g~~~~----~~~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~  340 (502)
                      +++|..+.|...    .+-++...     +-|.+.+.  |.+. +-++.+.++..+.-.+  .+  .+.-  +..     
T Consensus       244 ~I~DEvQTGl~RTGk~la~d~env-----~PDivilg--KalSGG~~Pvsavl~~~~im~--~~--~pge--Hgs-----  305 (427)
T KOG1402|consen  244 LIADEVQTGLARTGKLLACDYENV-----RPDIVILG--KALSGGVYPVSAVLADDDIML--NI--KPGE--HGS-----  305 (427)
T ss_pred             EEehhhhhcccccCcEEEeehhhc-----CCCeEEEe--ccccCCeeeeEEEEecHHHHh--cc--CCCc--ccc-----
Confidence            999998877542    22223332     67888766  6663 3355666665433221  11  1110  000     


Q ss_pred             cccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC-eE-EecC--CCeeEEEEEeec
Q 037144          341 KEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKR-FE-VAFP--RNFSLVCFRVTP  416 (502)
Q Consensus       341 ~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~-~~-l~~~--~~~~~v~f~~~~  416 (502)
                                |. ++   ..|+...++..+..---+++.+++..+...|+.+|.+++. |. ++..  -..-+..+.+.+
T Consensus       306 ----------Ty-gg---NpLg~~vaiAalevi~eekL~era~~lG~~l~~~L~~l~~~~p~~v~~VRGrGl~~ai~i~~  371 (427)
T KOG1402|consen  306 ----------TY-GG---NPLGCAVAIAALEVIVEEKLVERAAKLGEILRDQLNKLQKKFPHVVKEVRGRGLLNAIVINP  371 (427)
T ss_pred             ----------cc-CC---ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhheeeccceEEEEEecc
Confidence                      00 11   3444445555544444467888999999999999988642 10 0111  111222333333


Q ss_pred             CcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHH
Q 037144          417 SAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQ  496 (502)
Q Consensus       417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~  496 (502)
                      ....                      ..++  -.++-.+.+.|.+  .-+.+ + ..+||+.- ...+++|++..+++|.
T Consensus       372 ~~~~----------------------~~~a--w~~cl~lk~~g~L--AkptH-~-~IiRfaPP-L~I~e~dl~eg~e~i~  422 (427)
T KOG1402|consen  372 SKTS----------------------GQDA--WDVCLALKENGLL--AKPTH-G-NIIRFAPP-LVISEEDLREGIEAIE  422 (427)
T ss_pred             cccc----------------------chhH--HHHHHcccccccc--cCCCC-C-CeEEecCC-cccCHHHHHHHHHHHH
Confidence            2110                      0111  2345555566753  22222 2 38999853 3467889999999998


Q ss_pred             HHH
Q 037144          497 EHL  499 (502)
Q Consensus       497 ~~~  499 (502)
                      +..
T Consensus       423 k~i  425 (427)
T KOG1402|consen  423 KTI  425 (427)
T ss_pred             HHh
Confidence            765

>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]

Probab=98.92  E-value=3.6e-07  Score=85.61  Aligned_cols=338  Identities=13%  Similarity=0.114  Sum_probs=199.9

Q ss_pred             HHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeC----CCCchhHHHHHH
Q 037144          118 ENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSS----DQTHCAFQKAAQ  193 (502)
Q Consensus       118 e~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s----~~~H~s~~~aa~  193 (502)
                      ..-+...++.+.|....       ++.+..+ -..|+..++..-.   +..    ..+..|+.-    ...||+++..++
T Consensus       113 De~il~l~~~iVGA~e~-------EvavmNs-LTvNlh~Ll~sFy---KPT----ekR~KILlE~kaFPSDhYAiesQ~~  177 (465)
T KOG3846|consen  113 DEPILPLLAPIVGAQEN-------EVAVMNS-LTVNLHSLLISFY---KPT----EKRFKILLEKKAFPSDHYAIESQCK  177 (465)
T ss_pred             chhhhhhhhhhccCCch-------hhhhHhh-hhhHHHHHHHHhc---CCc----chhhhhhhccCCCCchHHHHHhhhh
Confidence            34466778888888654       2333222 2345554443321   110    012223221    236999999999


Q ss_pred             HcCCCCC-CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccc
Q 037144          194 IVGIDRK-NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAY  272 (502)
Q Consensus       194 ~~Glg~~-~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~  272 (502)
                      +-|+... .++.|...++ .-.+..+++-..|++   +|....+|+.+.....||..-++.+|...-+..|+++=-|-||
T Consensus       178 lhG~~~e~sm~~iePREG-EetlRteDILd~IEk---ngDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAH  253 (465)
T KOG3846|consen  178 LHGISPENSMIQIEPREG-EETLRTEDILDTIEK---NGDEIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAH  253 (465)
T ss_pred             hcCCChHHheEEeccccc-ccchhHHHHHHHHHh---cCCeEEEEEeecceeecccccchhhhhhcccCCCcEechhhhh
Confidence            9999533 4566666553 347888888777764   4556778888889999999999999996666779999999999


Q ss_pred             ccccccCccchhhhcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccc--cCCCc
Q 037144          273 AGSACICPEFRHFIDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQE--VGYKD  349 (502)
Q Consensus       273 g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~--~~~~~  349 (502)
                      +.+-.+..-+.+      ++|+.++...|+++ ++.|.|.+++-++.. .+.......|..+....+......  ...+.
T Consensus       254 AvgNVpL~LHdW------gVDFACWCSYKYlnaGaGgIgGlFvHekh~-~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa  326 (465)
T KOG3846|consen  254 AVGNVPLQLHDW------GVDFACWCSYKYLNAGAGGIGGLFVHEKHT-KESLPRLAGWWGHDPSKRFQMDNVLELIPGA  326 (465)
T ss_pred             hhcCCceEEeec------CCceEEEeeecccccCCCccceeeeehhhh-cchhhHHhhhccCCcchhhhhccccccCccc
Confidence            877665533333      89999999999997 567788888865532 222222333433321110000011  11122


Q ss_pred             ccccCCCCC--CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEe-ecCcchhhhhhc
Q 037144          350 WQITLCRRF--RSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRV-TPSAVMDKLRTK  426 (502)
Q Consensus       350 ~~~~~sr~~--~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~-~~~~~~~~~~~~  426 (502)
                      .++..|.+.  ...++..+++.+.+-.+.++..+..-++.|+...++..-|..-  +....-..|.+ .|...+      
T Consensus       327 ~GfRiSNPpi~~v~al~~SLe~F~q~~~~~lRkrS~lLTgYleyL~k~~~g~~~--~~rt~Kl~~~IiTP~~~~------  398 (465)
T KOG3846|consen  327 LGFRISNPPIIDVVALRSSLELFAQFNINELRKRSLLLTGYLEYLLKASKGYKH--PLRTEKLFFTIITPTSTD------  398 (465)
T ss_pred             cccccCCCcHhHHHHHHhhHHHHHHhhHHHHhhhhhhHHhHHHHHHHHhcccCc--hhhhcceeEEEeCCcccc------
Confidence            222223321  2246667788777777888899999999999888876543321  00000011111 111100      


Q ss_pred             ccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          427 YKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       427 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                            +.+-+..-.  ....+..+..+|.++|.+.    .-+...++|++....+++-.||.+++++|.++...
T Consensus       399 ------erGcQLsl~--Fssp~~~vfqeL~krGv~~----DkR~PNvIRvAPvpLYN~f~Dvy~f~n~L~e~~d~  461 (465)
T KOG3846|consen  399 ------ERGCQLSLY--FSSPTPKVFQELHKRGVIG----DKRRPNVIRVAPVPLYNTFSDVYIFVNALNEAMDK  461 (465)
T ss_pred             ------cccceEEEE--eCCCchHHHHHHHHcCeec----cccCCCceEeecchhhccHHHHHHHHHHHHHHHHH
Confidence                  000000000  0011356777788888542    22345689999887788889999999999988754

>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]

Probab=98.91  E-value=1.6e-06  Score=84.75  Aligned_cols=224  Identities=16%  Similarity=0.058  Sum_probs=132.4

Q ss_pred             cEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCC---C--CCcccC
Q 037144          142 GGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTK---S--SSYGLS  216 (502)
Q Consensus       142 ~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~---~--~~~~~d  216 (502)
                      .++|..+||+||..||..||.....+....  +--+|..-...|---.-++...+.   .-..+|.++   +  .--.-|
T Consensus       118 rvff~nsGTeAne~ALK~Ark~~~~~~~~~--~t~~Iaf~nsyHG~tlgals~~~~---s~y~~~~~p~~p~v~~~~ynd  192 (433)
T KOG1401|consen  118 RVFFCNSGTEANETALKFARKFTGKKHPEK--KTKFIAFENSYHGRTLGALSVTGN---SKYGLPFDPIAPDVVTAEYND  192 (433)
T ss_pred             EEEEecCCcHHHHHHHHHHHHhhcccCCcc--ceeEEEEecCcCCcchhHHHhhcc---cccCCCCCCCCCceeecccCC
Confidence            689999999999999999998654322111  112444455556433333333332   222222211   0  001237


Q ss_pred             HHHHHHHHHHHHhcCCccEEEEEecCCcccccc--CC--hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCC
Q 037144          217 AESVLSQINLDVEAELIPLFLCATVGTTAITAV--DP--LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECV  292 (502)
Q Consensus       217 ~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i--dp--l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~a  292 (502)
                      +.+|++.++....  . +..|++-...-.-|.+  +|  +..|..+|+++|+.|+-|..+.|.....+.+.+-.-++ .-
T Consensus       193 ~t~l~k~~~~h~~--~-IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~-~P  268 (433)
T KOG1401|consen  193 STALEKLFESHKG--E-IAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFGV-TP  268 (433)
T ss_pred             HHHHHHHHHhCCC--c-eEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHHHHHhCc-CC
Confidence            9999999987542  1 4466666666555555  33  77899999999999999999988666555554433333 56


Q ss_pred             CeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHH---HHHHHH
Q 037144          293 DSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKL---WVVIRN  369 (502)
Q Consensus       293 Dsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~---~~~l~~  369 (502)
                      |.+|+.  |.|+...+.|...++++-  .+.++...+ +.+..+               +    ...+++.   ..++..
T Consensus       269 DI~t~a--K~L~gGlPigA~~v~~kV--~~~i~~~~~-l~hg~T---------------f----~gnpLacsa~~~~l~~  324 (433)
T KOG1401|consen  269 DITTVA--KPLGGGLPIGATGVRDKV--AEMISPGDH-LYHGGT---------------F----SGNPLACSAGIKVLDE  324 (433)
T ss_pred             cceeeh--hhccCCceeEEEeehHHH--HhhcCCCCc-cccCcc---------------c----CCChhhhhHHHHHHHH
Confidence            888876  888777788999887663  234433322 222111               0    1133333   334444


Q ss_pred             hc-HHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 037144          370 FG-VANLRNFIRSHVGMAKLFERLVTSDKR  398 (502)
Q Consensus       370 ~g-~~g~~~~~~~~~~la~~l~~~l~~~~~  398 (502)
                      +. .+.+.+.-.....+++.+.+.+.+-+.
T Consensus       325 l~~~e~~k~vs~~~k~L~~~l~e~~~~~~~  354 (433)
T KOG1401|consen  325 LKDPETLKNVSKIGKELRKLLDEYLKKTPN  354 (433)
T ss_pred             HcCHHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence            43 344555556666777777777766543

>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase

Probab=98.87  E-value=6.9e-06  Score=90.42  Aligned_cols=234  Identities=12%  Similarity=0.055  Sum_probs=123.7

Q ss_pred             HHHHHHHHHHH--hcCCccEEEEEecC-CccccccCC----hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCC
Q 037144          218 ESVLSQINLDV--EAELIPLFLCATVG-TTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE  290 (502)
Q Consensus       218 ~~Le~~i~~~~--~~g~~p~~Vv~t~g-tt~~G~idp----l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~  290 (502)
                      +.+++.|++..  ..+..+..|++.-. ....|.+-|    +++|.++|++||+.|+.|..+.|+.-....+..-..++ 
T Consensus       567 ~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~gv-  645 (817)
T PLN02974        567 SYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLGC-  645 (817)
T ss_pred             HHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcCC-
Confidence            45666665321  12234555665542 334466633    88999999999999999999988754433222222234 


Q ss_pred             CCCeeEEccCCcCCCCC-cceEEEeeCchhhhhhhcCCc--ccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHH
Q 037144          291 CVDSFSFNPHKWLFTTL-DCCCLWVKDPSCLLSTLSTNP--QYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVI  367 (502)
Q Consensus       291 ~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~~--~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l  367 (502)
                      ..|.+++.  |.+...+ +.|.+++++.  +.+.|....  ..+....               |. .+.+..+....+++
T Consensus       646 ~PDIi~~g--KgLtgG~~Plaa~l~~~~--I~~~f~~~~~~~~~~hg~---------------Ty-~gnpl~cAaala~L  705 (817)
T PLN02974        646 KPDIACYA--KLLTGGLVPLAATLATEE--VFEAFRGPSKLDALLHGH---------------SY-TAHPMGCAAAAKAL  705 (817)
T ss_pred             CCCEEeec--ccccCCCCccEEEEEcHH--HHHhhccccccCCcccCC---------------CC-CcCHHHHHHHHHHH
Confidence            58999877  8887663 6788887644  223442110  0011100               00 11122233334445


Q ss_pred             HHhcHH-HHHHHHHHHHHHHHHHHHHH----hcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhH
Q 037144          368 RNFGVA-NLRNFIRSHVGMAKLFERLV----TSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEE  442 (502)
Q Consensus       368 ~~~g~~-g~~~~~~~~~~la~~l~~~l----~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  442 (502)
                      +.+-.+ -+....++..++..++.+.|    .+.|.+.=+. -...++.+.+.....                 +  ...
T Consensus       706 ~~~~~~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~VR-g~Gl~~~iel~~~~~-----------------~--~~~  765 (817)
T PLN02974        706 QWYKDPSTNPNLIPPGSRLRELWDEELVRAISSLPNVERVV-SLGTVLALELDAEGS-----------------G--SGY  765 (817)
T ss_pred             HHHHcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEE-eeeeEEEEEEecCCc-----------------c--ccc
Confidence            555332 22344455555555555444    3344332111 112344454433210                 0  000


Q ss_pred             hhHHHHHHHHHHHH-hcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144          443 RTNEFNRELLESIN-VSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHL  499 (502)
Q Consensus       443 ~~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~  499 (502)
                       .......+.+.+. ++|.+. .+.   | .++|+.. .+.+++++++++++.|.+.+
T Consensus       766 -~~~~a~~v~~~~~~~~Gl~~-r~~---G-nvi~l~p-P~~i~~e~l~~~~~~l~~~~  816 (817)
T PLN02974        766 -SSLYARSVVRRLRREDGIYA-RPL---G-NVVYLMC-GPTTSPETCTRLLRKVYRRL  816 (817)
T ss_pred             -chHHHHHHHHHHHHhCCEEE-Eec---C-CEEEEeC-CCCCCHHHHHHHHHHHHHHh
Confidence             0233456777777 778643 221   2 4788763 57788999999999998754

>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]

Probab=98.79  E-value=3e-07  Score=90.65  Aligned_cols=149  Identities=19%  Similarity=0.155  Sum_probs=101.8

Q ss_pred             cEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEE----EeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCH
Q 037144          142 GGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVV----YSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSA  217 (502)
Q Consensus       142 ~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v----~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~  217 (502)
                      .+++++..+.|++..+.+..+.          ...++    .+. ..|+++...+++.|.   .++.+...    .+...
T Consensus        85 a~~ivnnn~aAVll~~~al~~~----------~EvVis~g~lV~-gg~~~v~d~~~~aG~---~l~EvG~t----n~t~~  146 (395)
T COG1921          85 AAAIVNNNAAAVLLTLNALAEG----------KEVVVSRGELVE-GGAFRVPDIIRLAGA---KLVEVGTT----NRTHL  146 (395)
T ss_pred             heeeECCcHHHHHHHHhhhccC----------CeEEEEcccccc-CCCCChhHHHHHcCC---EEEEeccc----CcCCH
Confidence            5788888777776555444321          11111    122 478999999999999   88887653    36799


Q ss_pred             HHHHHHHHHHHhcCCccEEEEEecCCcccccc--CChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCee
Q 037144          218 ESVLSQINLDVEAELIPLFLCATVGTTAITAV--DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSF  295 (502)
Q Consensus       218 ~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i--dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi  295 (502)
                      .+++.+|.+.++      ++.-++.++. |..  -++++++++|+++|+.++||.+-|.-.-.-+..+..++  .++|.+
T Consensus       147 ~d~~~AIne~ta------~llkV~s~~~-~f~~~l~~~~l~~ia~~~~lpvivD~aSg~~v~~e~~l~~~la--~GaDLV  217 (395)
T COG1921         147 KDYELAINENTA------LLLKVHSSNY-GFTGMLSEEELVEIAHEKGLPVIVDLASGALVDKEPDLREALA--LGADLV  217 (395)
T ss_pred             HHHHHHhccCCe------eEEEEeeccc-cccccccHHHHHHHHHHcCCCEEEecCCccccccccchhHHHh--cCCCEE
Confidence            999999998875      4444444433 333  46778999999999999999987654332223333332  289999


Q ss_pred             EEccCCcCCCCCcceEEEeeCchh
Q 037144          296 SFNPHKWLFTTLDCCCLWVKDPSC  319 (502)
Q Consensus       296 ~~~~hK~l~~p~~~g~~~~r~~~~  319 (502)
                      ++|++|.|++|. .|++.-| +++
T Consensus       218 ~~SgdKllgGPq-aGii~Gk-Kel  239 (395)
T COG1921         218 SFSGDKLLGGPQ-AGIIVGK-KEL  239 (395)
T ss_pred             EEecchhcCCCc-cceEech-HHH
Confidence            999999999996 6666554 444

>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

Probab=98.78  E-value=4.2e-06  Score=81.54  Aligned_cols=279  Identities=13%  Similarity=0.081  Sum_probs=167.1

Q ss_pred             cEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHH
Q 037144          142 GGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVL  221 (502)
Q Consensus       142 ~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le  221 (502)
                      .++=|.|||-|+-.+.......         .++..|++|+++..-........|+   ++...|.-...+..+|.+.+-
T Consensus        96 ~t~Qt~GGTGAL~~~A~fl~~~---------~~~~~vwis~PtW~NH~~If~~aGl---~v~~Y~Yyd~~~~~~df~~ml  163 (396)
T COG1448          96 ATVQTLGGTGALRVAADFLARF---------FPDATVWISDPTWPNHKAIFEAAGL---EVETYPYYDAETKGLDFDGML  163 (396)
T ss_pred             hheecCCcchHHHHHHHHHHHh---------CCCceEEeCCCCcHhHHHHHHhcCC---ceeeeeccccccccccHHHHH
Confidence            4566888998875554332222         1566799999998777777788999   999998754444568999998


Q ss_pred             HHHHHHHhcCCccEEEEE-ecCCcccccc---CChhHHHHHHHHhCCEEEeecccccccccCccc----hhhhcCCCCCC
Q 037144          222 SQINLDVEAELIPLFLCA-TVGTTAITAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEF----RHFIDGVECVD  293 (502)
Q Consensus       222 ~~i~~~~~~g~~p~~Vv~-t~gtt~~G~i---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~----~~~~~~~~~aD  293 (502)
                      +.|+...+..    +|++ .+.+|+||.-   +..++|+++.++.|+.-.+|-||-|+.--.++.    |...... .-=
T Consensus       164 a~L~~a~~~~----vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~-~~~  238 (396)
T COG1448         164 ADLKTAPEGS----VVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFAEVG-PEL  238 (396)
T ss_pred             HHHHhCCCCC----EEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHHHHHhC-CcE
Confidence            8887765432    3333 3478999964   457799999999999999999997765433322    1111111 114


Q ss_pred             eeEEccCCcCCCC-CcceE--EEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCC-CCchHHHH----
Q 037144          294 SFSFNPHKWLFTT-LDCCC--LWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRR-FRSLKLWV----  365 (502)
Q Consensus       294 si~~~~hK~l~~p-~~~g~--~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~----  365 (502)
                      .++.|+.|.|+.- -..|+  ++..+.+.....++.-..-+....                   |.+ ....++-+    
T Consensus       239 lva~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~y-------------------SnPP~~Ga~vva~IL~  299 (396)
T COG1448         239 LVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNY-------------------SNPPAHGAAVVATILN  299 (396)
T ss_pred             EEEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhcc-------------------CCCchhhHHHHHHHhC
Confidence            6788899998632 12333  334454443333322211111110                   000 01111111    


Q ss_pred             --HHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC-C--CeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccch
Q 037144          366 --VIRNFGVANLRNFIRSHVGMAKLFERLVTSD-K--RFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSE  440 (502)
Q Consensus       366 --~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~-~--~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  440 (502)
                        .|+..-..-+..+.++..++++.|.+.|++. +  .|..+ ..+.++++|.  +-.                      
T Consensus       300 ~p~Lra~W~~El~~Mr~Ri~~mR~~lv~~L~~~~~~~~f~~i-~~Q~GMFsy~--Gls----------------------  354 (396)
T COG1448         300 NPELRAEWEQELEEMRQRILEMRQALVDALKALGAPRNFDFI-ISQRGMFSYT--GLS----------------------  354 (396)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchH-hhcCceeecC--CCC----------------------
Confidence              2333334456778889999999999999872 2  35555 4456777764  211                      


Q ss_pred             hHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144          441 EERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEH  498 (502)
Q Consensus       441 ~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~  498 (502)
                              .+-.++|.++-.+++..   .|    |++++..  ++..|+++.++|.++
T Consensus       355 --------~~QV~rLree~~IY~v~---sG----Ri~vaGl--~~~ni~~va~ai~~v  395 (396)
T COG1448         355 --------PEQVDRLREEFGIYLVA---SG----RINVAGL--NTSNIDYVAKAIAAV  395 (396)
T ss_pred             --------HHHHHHHHHhccEEEec---CC----eeeeccC--ChhhHHHHHHHHHhh
Confidence                    11233444444344332   22    8998754  455899999998765

>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue

Probab=98.73  E-value=3.5e-06  Score=84.43  Aligned_cols=188  Identities=13%  Similarity=0.029  Sum_probs=109.1

Q ss_pred             HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144          116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV  195 (502)
Q Consensus       116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~  195 (502)
                      ....++.+.|.++++-..       ...+|+.||++|+-.|+..+|.....+. ..+ +..++......|-...-+..+.
T Consensus        59 ~~~~~la~~L~~~~p~~~-------~~v~f~~sGseAve~Alkla~~~~~~~~-~~~-r~~il~~~~~yHG~t~~~~s~~  129 (339)
T PF00202_consen   59 PEAAELAEKLAELFPGGL-------DRVFFANSGSEAVEAALKLARQYHNKRA-YTG-RRKILAFEGSYHGRTLGALSLT  129 (339)
T ss_dssp             HHHHHHHHHHHHHSSTTE-------EEEEEESSHHHHHHHHHHHHHHHHHHTH-HHT-TTEEEEETTTB-TSSHHHHHHS
T ss_pred             cchhhhhhhhhhcccccc-------ceeeeccCchHHHHHHHHHhhccccccc-ccC-CceEEEeeeeeeccCccccccc
Confidence            344556777888883322       2589999999999999999993211110 000 2334444545564333233322


Q ss_pred             ---------CCCCCCEEEEecCCCCC---cccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc----CChhHHHHHH
Q 037144          196 ---------GIDRKNIRAIKTTKSSS---YGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV----DPLKPLCDVA  259 (502)
Q Consensus       196 ---------Glg~~~v~~v~~~~~~~---~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i----dpl~eI~~i~  259 (502)
                               +.....+..+|.+....   ..-..+.+++.+.+...  ....+|++.-.....|.+    +=+++|.++|
T Consensus       130 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc  207 (339)
T PF00202_consen  130 GNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAALNA--DEIAAVIVEPIQGEGGMIPPPPEYLRELRELC  207 (339)
T ss_dssp             SSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHHG--GGEEEEEEESSBTTTTSBEE-TTHHHHHHHHH
T ss_pred             CCccccccccccccccccccCCccchhhhHHHHHHHHHHHHHhhcC--CcEEEEEEeccccccCccccccchhhehcccc
Confidence                     11123567777652100   00012224444443322  224566666655555655    2389999999


Q ss_pred             HHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCc
Q 037144          260 KQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDP  317 (502)
Q Consensus       260 ~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~  317 (502)
                      ++||+.+++|..+.|+.....-+.....++ ..|.++++  |.++.....|.++++++
T Consensus       208 ~~~gillI~DEV~tG~gRtG~~~a~~~~gv-~PDiv~~g--K~l~gG~p~sav~~~~~  262 (339)
T PF00202_consen  208 REHGILLIADEVQTGFGRTGKFFASEHYGV-DPDIVTFG--KGLGGGLPISAVLGSEE  262 (339)
T ss_dssp             HHTT-EEEEEETTTTTTTTSSSSGHHHHTS-SSSEEEEE--GGGGTTSSEEEEEEEHH
T ss_pred             cccccceecccccccccccCCccceecccc-cCcccccc--cchhhhhhcccccccch
Confidence            999999999999987644333222222344 67999997  99977688999988754

On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....

>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases

Probab=98.65  E-value=1.6e-05  Score=77.78  Aligned_cols=304  Identities=14%  Similarity=0.127  Sum_probs=155.1

Q ss_pred             HHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC----ccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144          120 IVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG----RENISKLVVYSSDQTHCAFQKAAQIV  195 (502)
Q Consensus       120 ~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~----~~~~~~~~v~~s~~~H~s~~~aa~~~  195 (502)
                      ++++.+++++|.+.+       ..++.+++|. |++--..++.......+    |...++...+|+.+++-.....++.+
T Consensus        73 e~r~l~a~llgv~~~-------~viv~gNSSL-~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFai~E~~  144 (425)
T PF12897_consen   73 EARELFAELLGVPPE-------NVIVGGNSSL-NLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFAITEHF  144 (425)
T ss_dssp             HHHHHHHHHHTS-GG-------GEEE-SS-HH-HHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHHHHHHC
T ss_pred             HHHHHHHHHhCCCHH-------HEEEeccchH-HHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHHHHHhh
Confidence            355778999999876       4555544443 43333333333222211    22336788899999998889999999


Q ss_pred             CCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHh-cCCccEEEEEecCCccccccCC---hhHHHHH-HHHhCCEEEeec
Q 037144          196 GIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVE-AELIPLFLCATVGTTAITAVDP---LKPLCDV-AKQFGIWVHVDA  270 (502)
Q Consensus       196 Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~-~g~~p~~Vv~t~gtt~~G~idp---l~eI~~i-~~~~g~~lhVDa  270 (502)
                      |+   +++.||++++   ..|++.+|+.+.++.. +|    +-++-.-+|++|..-.   +++++.+ +...++.+.-|-
T Consensus       145 Gi---emi~VpM~~d---GPDmD~Ve~LV~~D~svKG----iWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDN  214 (425)
T PF12897_consen  145 GI---EMIPVPMTED---GPDMDMVEELVAEDPSVKG----IWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDN  214 (425)
T ss_dssp             T----EEEEEEEETT---EE-HHHHHHHTHTSTTEEE----EEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-
T ss_pred             Cc---EEEecCCCCC---CCCHHHHHHHHhcCCccce----EEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeec
Confidence            99   9999999864   4799999999976543 22    4555556889999843   4455554 235689999999


Q ss_pred             ccccccccCccch----hhhc---CCCCCC--eeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCc
Q 037144          271 AYAGSACICPEFR----HFID---GVECVD--SFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPK  341 (502)
Q Consensus       271 A~g~~~~~~~~~~----~~~~---~~~~aD--si~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~  341 (502)
                      ||+...+..+..+    ..+.   .....|  .+..|.+|--+...|.+++..... .+.... .   ++....      
T Consensus       215 AY~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKITf~GaGva~~aaS~~-Nl~~~~-~---~~~~~t------  283 (425)
T PF12897_consen  215 AYAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKITFPGAGVAFFAASEA-NLAWIK-K---HLSVQT------  283 (425)
T ss_dssp             TTTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS-TTSS-EEEEE-HH-HHHHHH-H---HHHHH-------
T ss_pred             CceEeeccccccchhhhHHHHHHHHcCCCCeEEEEecccccccCCcceeeeecCHH-HHHHHH-H---HhcCce------
Confidence            9988877322111    1111   111233  556778998777666666655332 221110 0   010000      


Q ss_pred             ccccCCCcccccCCCCCCchHHHHHHHHhc-HH-HHHHHHHHHHHH--------HHHHHHHHh-cCCCeEEecCCCee-E
Q 037144          342 EQEVGYKDWQITLCRRFRSLKLWVVIRNFG-VA-NLRNFIRSHVGM--------AKLFERLVT-SDKRFEVAFPRNFS-L  409 (502)
Q Consensus       342 ~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~-g~~~~~~~~~~l--------a~~l~~~l~-~~~~~~l~~~~~~~-~  409 (502)
                         +           ...-+....-.+.++ .+ |++++++++.++        -+.|.+.|. .. ++--+..|..+ +
T Consensus       284 ---I-----------gpdKvNQLRHvrff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~-~ia~Wt~P~GGYF  348 (425)
T PF12897_consen  284 ---I-----------GPDKVNQLRHVRFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGL-GIASWTKPKGGYF  348 (425)
T ss_dssp             ---S--------------HHHHHHHHHHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGG-TSEEE---SBSS-
T ss_pred             ---e-----------CccHHHHHHHHHHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCC-CeeEecCCCCceE
Confidence               0           001223333444443 45 777777766542        234444554 32 45556666544 6


Q ss_pred             EEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEee--eE-----CCEEEEEEEecCCC
Q 037144          410 VCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHA--IV-----GGIYVLRFAAGNSM  482 (502)
Q Consensus       410 v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~--~~-----~g~~~lR~~~~~~~  482 (502)
                      |+|...+..                             .+++.+...+.|.. +++.  .+     .....||++.+.+ 
T Consensus       349 Isld~~~G~-----------------------------AkrvV~lakeAGV~-LT~AGAtfPyg~DP~D~nIRiAPS~P-  397 (425)
T PF12897_consen  349 ISLDVLDGT-----------------------------AKRVVELAKEAGVA-LTPAGATFPYGKDPRDSNIRIAPSYP-  397 (425)
T ss_dssp             EEEEESTT------------------------------HHHHHHHHHHTTEE----TTTTSGGG--TTS-EEEE--SSS-
T ss_pred             EEEecCCCh-----------------------------HHHHHHHHHHhCce-eCCCCCCCCCCCCCCCCcEEecCCCC-
Confidence            677765532                             45667767777864 4442  11     1246899998654 


Q ss_pred             CcHHHHHHHHHHHHHHH
Q 037144          483 TMESHVRAAWTVVQEHL  499 (502)
Q Consensus       483 t~~~di~~~~~~l~~~~  499 (502)
                       +.++++.+++.+.-+.
T Consensus       398 -~leel~~Am~~~~~cv  413 (425)
T PF12897_consen  398 -SLEELETAMDVFATCV  413 (425)
T ss_dssp             --HHHHHHHHHHHHHHH
T ss_pred             -CHHHHHHHHHHHHHHH
Confidence             6679999998876543

; PDB: 3D6K_C 3EZ1_A 3PPL_B.

>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]

Probab=98.58  E-value=2.6e-05  Score=75.08  Aligned_cols=189  Identities=18%  Similarity=0.223  Sum_probs=114.2

Q ss_pred             cccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCc
Q 037144          106 LDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTH  185 (502)
Q Consensus       106 ~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H  185 (502)
                      -.|..+...-.+...    +.+.||+.-..       =.=++-|.|.++..+..-..        +..++.+..+.+..|
T Consensus        73 EAYagsrs~~~L~~a----vkdifGfq~~i-------PthQGRgAE~Il~~i~ik~~--------~~~pg~~~~~~sN~~  133 (471)
T COG3033          73 EAYAGSRSYYALADA----VKDIFGFQYTI-------PTHQGRGAENILIPILIKKG--------EQEPGSKMVAFSNYH  133 (471)
T ss_pred             hhhcccccHHHHHHH----HHHhcCceeee-------eccCCccHHHHHHHHHhhhc--------cccCCccccccccce
Confidence            356666666666655    55667764210       01122345666554432110        011444445555678


Q ss_pred             hhHHHH-HHHcCCCCCCEEEEecCCCC--------CcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc---cCChh
Q 037144          186 CAFQKA-AQIVGIDRKNIRAIKTTKSS--------SYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA---VDPLK  253 (502)
Q Consensus       186 ~s~~~a-a~~~Glg~~~v~~v~~~~~~--------~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~---idpl~  253 (502)
                      +-.-++ .+..|.   .++-+++++..        .|.+|++.|++.|++... ...|.++.....++..|.   ++.++
T Consensus       134 FdTTr~h~~~ng~---~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~-~nvp~I~~tiT~NsagGQpVSm~n~r  209 (471)
T COG3033         134 FDTTRGHIQINGA---TPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGA-DNVPYIVLTITNNSAGGQPVSMANMK  209 (471)
T ss_pred             ecchhHHHHhcCC---ccccccccccccccccCCCCCccCHHHHHHHHHHhCc-ccCcEEEEEEeccccCCCcchHHhHH
Confidence            765554 345555   55555554311        368999999999987643 345654444444555554   47899


Q ss_pred             HHHHHHHHhCCEEEeeccccc-ccccC----ccchhh-h-----cCCCCCCeeEEccCCcCCCCCcceEEEeeCch
Q 037144          254 PLCDVAKQFGIWVHVDAAYAG-SACIC----PEFRHF-I-----DGVECVDSFSFNPHKWLFTTLDCCCLWVKDPS  318 (502)
Q Consensus       254 eI~~i~~~~g~~lhVDaA~g~-~~~~~----~~~~~~-~-----~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~  318 (502)
                      ++.+||++|++.++.|+|..+ .+.+.    +.++++ .     .-++-+|-++.|+-|=..++. .|+++++|+.
T Consensus       210 ~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~lvnm-GGfl~~~D~~  284 (471)
T COG3033         210 AVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDGLVNM-GGFLCFKDDS  284 (471)
T ss_pred             HHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhheeeccccceecc-ccEEEecCcc
Confidence            999999999999999997533 22222    233322 1     124589999999999988875 5788888875

>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]

Probab=98.49  E-value=1.6e-06  Score=79.73  Aligned_cols=237  Identities=14%  Similarity=0.084  Sum_probs=143.6

Q ss_pred             hhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCch-HHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHH
Q 037144          113 AAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTC-EALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKA  191 (502)
Q Consensus       113 ~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt-~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a  191 (502)
                      ....+-.+.....-++.|+-.-.      ..++++-+| +++-+.+...|.+. ++      .+.+|+ .....-|..|.
T Consensus        54 ll~~isne~a~~~i~l~glhav~------nc~vvpl~tgmslslc~~s~r~kr-pk------akyiiw-~ridqks~~ks  119 (432)
T KOG3843|consen   54 LLACISNEFAKDAIHLAGLHAVA------NCFVVPLATGMSLSLCFLSLRHKR-PK------AKYIIW-LRIDQKSCFKS  119 (432)
T ss_pred             HHHHHHHHHHHHHHHHhhhhhhh------ceeEEeccccccHHHHHHHHhhcC-Cc------ccEEEE-EecchHHHHHH
Confidence            34556666666677777763211      223333222 44545555555531 00      233443 45566677777


Q ss_pred             HHHcCCCCCCEEEEe-cCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc---cCChhHHHHHHHHhCCEEE
Q 037144          192 AQIVGIDRKNIRAIK-TTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA---VDPLKPLCDVAKQFGIWVH  267 (502)
Q Consensus       192 a~~~Glg~~~v~~v~-~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~---idpl~eI~~i~~~~g~~lh  267 (502)
                      .--.|.   +.+.|. +.+.+....|++++++.+++...     -+|...+.||+.-+   -|.+++|+.||..|++.-+
T Consensus       120 i~~agf---epiiie~i~d~d~l~tdleav~~~iee~g~-----dcilci~sttscfapr~pd~leaiaaica~~diphi  191 (432)
T KOG3843|consen  120 IIHAGF---EPIIIENILDGDELITDLEAVEAIIEELGE-----DCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHI  191 (432)
T ss_pred             HHhcCC---CceeeeccccchHHHHhHHHHHHHHHHhCC-----ceEEEEeecccccCCCCCchHHHHHHHHHccCchhh
Confidence            666777   666664 33334577899999999987543     35555555555543   4889999999999999999


Q ss_pred             eecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCC
Q 037144          268 VDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGY  347 (502)
Q Consensus       268 VDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~  347 (502)
                      |.-|||...-.+-..-.......++|.++-+.-|.+++|.|..++..-+...++ .+  ...|-....            
T Consensus       192 vnnayglqsee~i~~iaa~~~~grida~vqsldknf~vpvggaiia~fk~n~iq-~i--ak~ypgras------------  256 (432)
T KOG3843|consen  192 VNNAYGLQSEECIHKIAAAAECGRIDAFVQSLDKNFMVPVGGAIIAAFKDNFIQ-EI--AKMYPGRAS------------  256 (432)
T ss_pred             hccccccchHHHHHHHHHHhhhccHHHHHHHhhhcceeecchhHhhHhHHHHHH-HH--HHhCCCccc------------
Confidence            999997653222110011122457899999999999999876665432221111 11  111221111            


Q ss_pred             CcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc
Q 037144          348 KDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTS  395 (502)
Q Consensus       348 ~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~  395 (502)
                               ...++.+...+..+|..+|.+...+..++--+++..|.+
T Consensus       257 ---------a~ps~dllitll~~gqn~f~e~~~eqkemf~~l~~ki~~  295 (432)
T KOG3843|consen  257 ---------ASPSLDLLITLLSLGQNAFKELFGEQKEMFLKLRNKIIK  295 (432)
T ss_pred             ---------cCccHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHH
Confidence                     013466777888889999998888888887777777643

>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor

Probab=98.32  E-value=5.8e-07  Score=88.01  Aligned_cols=161  Identities=16%  Similarity=0.118  Sum_probs=37.6

Q ss_pred             HHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCC------chhHHHHHH
Q 037144          120 IVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQT------HCAFQKAAQ  193 (502)
Q Consensus       120 ~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~------H~s~~~aa~  193 (502)
                      .+.+.++.+.|..+         ++++++...|++.++.+...            +-.|++|.-.      .+.+....+
T Consensus        51 ~v~~ll~~ltgAea---------A~VvNnnaAAv~L~l~~la~------------~~EvIvsRGelVeiGgsFRip~vm~  109 (367)
T PF03841_consen   51 HVEELLCELTGAEA---------ALVVNNNAAAVLLALNTLAK------------GKEVIVSRGELVEIGGSFRIPDVMR  109 (367)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cccccccccccccc---------cccccccccccccccccccc------------ccccccccccccccccccccccccc
Confidence            35566788888764         56777766666665554322            1234445322      223555666


Q ss_pred             HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcc--cccc--CChhHHHHHHHHhCCEEEee
Q 037144          194 IVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTA--ITAV--DPLKPLCDVAKQFGIWVHVD  269 (502)
Q Consensus       194 ~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~--~G~i--dpl~eI~~i~~~~g~~lhVD  269 (502)
                      ..|.   .++.|-+..    +..+++.+++|++++.      ++.-.+.+|.  .|-.  -+++++++++++|++++++|
T Consensus       110 ~sGa---~lvEVGttN----~t~~~Dye~AI~e~Ta------~ll~Vh~Sn~~i~GFt~~~~~~el~~la~~~~lp~i~D  176 (367)
T PF03841_consen  110 QSGA---RLVEVGTTN----RTHLSDYEKAITENTA------ALLKVHTSNFRIQGFTGEVSLEELAELAKEHGLPVIVD  176 (367)
T ss_dssp             ----------------------------------------------------------------HHHHHHHHHT--EEEE
T ss_pred             cccc---ccccccccc----cccccccccccccccc------ccccccccccccccccccccHHHHHHHHhhcCCcEEEE
Confidence            6777   888887641    6688999999999886      4555554444  2322  48999999999999999999


Q ss_pred             cccccccc----cC---ccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCc
Q 037144          270 AAYAGSAC----IC---PEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDP  317 (502)
Q Consensus       270 aA~g~~~~----~~---~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~  317 (502)
                      .+-|...=    ..   |..+..++  .++|.+++|+.|.+++|. +|+++-|..
T Consensus       177 lgsG~l~dl~~~gl~~Ep~v~~~~~--~GaDlV~fSGdKlLGGPQ-aGiI~Gkk~  228 (367)
T PF03841_consen  177 LGSGLLVDLSPYGLPDEPTVQEYLA--AGADLVTFSGDKLLGGPQ-AGIIVGKKE  228 (367)
T ss_dssp             -TTHHHHHHHTT----------CCC--CT-SEEEEETTSSSSS-S--EEEEEEHH
T ss_pred             CCCCCCcCcccccCccccHHHHHhh--cCCCEEEEECCCcCCCCC-eEEEEeCHH
Confidence            87644321    01   11111111  379999999999999986 688877644

3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.

>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria []

Probab=98.21  E-value=0.00065  Score=66.33  Aligned_cols=164  Identities=10%  Similarity=0.072  Sum_probs=97.2

Q ss_pred             HHHHHHHhcCCCCccCcCCCCcEEE---cCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEE-eCCCCchhHHHHHHH--
Q 037144          121 VMDWLGQMLDLPKSFLFSGNGGGVI---QGTTCEALLCTLTAARDRVLKKIGRENISKLVVY-SSDQTHCAFQKAAQI--  194 (502)
Q Consensus       121 ~~~~l~~l~g~~~~~~~~~~~~g~~---t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~-~s~~~H~s~~~aa~~--  194 (502)
                      +-+-+++.||.++.         ++   .-+||.|+-++|.....           |++.++ ++...+-.+++..-+  
T Consensus        59 le~iyA~vfgaE~A---------LVRpq~vSGTHAi~~~Lfg~Lr-----------pGD~ll~~tG~PYDTL~~VIG~~g  118 (403)
T PF06838_consen   59 LERIYADVFGAEDA---------LVRPQFVSGTHAIALALFGVLR-----------PGDELLSITGKPYDTLEEVIGIRG  118 (403)
T ss_dssp             HHHHHHHHCT-SEE---------EEETTS-SHHHHHHHHHHHH-------------TT-EEEESSSS--CCHHHHHTSSS
T ss_pred             HHHHHHHHhCchhh---------hhcccccchHHHHHHHHHhcCC-----------CCCeEEEcCCCchhhHHHHhCCCC
Confidence            33457899998753         22   23678888777766554           666665 455555567666533  


Q ss_pred             --------cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEec--CC--ccccccCChhHHHHHHHHh
Q 037144          195 --------VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATV--GT--TAITAVDPLKPLCDVAKQF  262 (502)
Q Consensus       195 --------~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~--gt--t~~G~idpl~eI~~i~~~~  262 (502)
                              .|+   +...||+.+  ++.+|.+.++++|++.++      +|...-  |.  -..=.+++|+++.++.|+.
T Consensus       119 ~~~GSL~e~Gi---~Y~~v~L~~--dg~~D~~~i~~~~~~~tk------~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~  187 (403)
T PF06838_consen  119 NGPGSLKEFGI---KYREVPLTE--DGTIDWEAIKKALKPNTK------MVLIQRSRGYSWRPSLTIEEIKEIIKFVKEI  187 (403)
T ss_dssp             SSSSSTGGGT----EEEE--B-T--TSSB-HHHHHHHHHTTEE------EEEEE-S-TTSSS----HHHHHHHHHHHHHH
T ss_pred             CCCCChHHhCc---eeEEEeecC--CCCcCHHHHHHhhccCce------EEEEecCCCCCCCCCCCHHHHHHHHHHHHhh
Confidence                    345   678888875  469999999999997654      555543  22  2333457788888888875


Q ss_pred             --CCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhh
Q 037144          263 --GIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLL  321 (502)
Q Consensus       263 --g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~  321 (502)
                        ++++.||-|||-+.-.. +.-+.     +||.+..|.-|..++. ..+|..++.+++...
T Consensus       188 ~p~~iifVDNCYGEFvE~~-EP~~v-----GADl~aGSLIKNpGGgiAptGGYIaGr~~lVe  243 (403)
T PF06838_consen  188 NPDVIIFVDNCYGEFVETQ-EPTEV-----GADLMAGSLIKNPGGGIAPTGGYIAGRKDLVE  243 (403)
T ss_dssp             -TTSEEEEE-TTTTTTSSS--GGGG-----T-SEEEEETTSGGGTTT-SS-EEEEESHHHHH
T ss_pred             CCCeEEEEeCCcceecccc-Ccccc-----chhheeccceeCCCCCccCcCCEEechHHHHH
Confidence              68999999997765433 22332     8999999999998632 346666666665543

; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.

>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]

Probab=98.19  E-value=0.00032  Score=65.59  Aligned_cols=338  Identities=13%  Similarity=0.045  Sum_probs=184.8

Q ss_pred             CHHHHHHHHHHhhcCCCCccc---c---cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHH
Q 037144           88 SVAGIVGEMLSSGFNVVGLDW---I---SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAAR  161 (502)
Q Consensus        88 ~~~~~~~~~l~~~~n~~~~~~---~---~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~  161 (502)
                      .+-+++.++-...+|-++.+-   +   -+..+..+-......+++|+..|+.+     .--++++|||.. +.|+..-.
T Consensus        18 lp~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~kii~~tes~lreLlniPdn~-----~vlf~QGGGt~q-FaAv~lNL   91 (370)
T KOG2790|consen   18 LPESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAKIINDTESLLRELLNIPDNY-----KVLFLQGGGTGQ-FAAVPLNL   91 (370)
T ss_pred             CCHHHHHHHHHHhhccCCCcceEEEecccchhHHHHHHHHHHHHHHHHcCCCce-----eEEEEeCCCccc-ccccchhh
Confidence            344556666666666654332   2   23456677778899999999999886     123456666643 23322211


Q ss_pred             HHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCC-cccCHHHHHHHHHHHHhcCCccEEEEEe
Q 037144          162 DRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSS-YGLSAESVLSQINLDVEAELIPLFLCAT  240 (502)
Q Consensus       162 ~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~-~~~d~~~Le~~i~~~~~~g~~p~~Vv~t  240 (502)
                      -.     .+.|..-+-|++..-+--+.+.|.++.-.   +.+..+..+..- -..|.+.++.-.+  .      .+|..+
T Consensus        92 ~g-----lK~g~~AdYiVTGsWS~KA~~EAkk~~~~---~~V~~~~k~y~ygkvPd~~~w~~~~d--a------~yvyyC  155 (370)
T KOG2790|consen   92 IG-----LKHGRCADYVVTGSWSAKAAEEAKKYGTP---NIVIPKLKSYTYGKVPDPSTWELNPD--A------SYVYYC  155 (370)
T ss_pred             hc-----cccCCccceEEeccccHHHHHHHHhhCCc---eEEeccccccccCcCCChhhcccCCC--c------cEEEEe
Confidence            10     11222334555554333445555444333   444444432110 1245555543221  1      278888


Q ss_pred             cCCcccccc-CChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchh
Q 037144          241 VGTTAITAV-DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSC  319 (502)
Q Consensus       241 ~gtt~~G~i-dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~  319 (502)
                      ...|..|.- +++.    +-.-.|..++.|-+.--..-+.        .+...+.|...++|..+ |.|..++++|+.-+
T Consensus       156 aNETVHGVEf~~~P----~~~~~~~vlVaDmSSnflSrpv--------Dvsk~gvi~aGAQKN~G-~aG~Tvvivr~dll  222 (370)
T KOG2790|consen  156 ANETVHGVEFDFIP----VNDPKGAVLVADMSSNFLSRPV--------DVSKFGVIFAGAQKNVG-PAGVTVVIVRKDLL  222 (370)
T ss_pred             cCceeeceecCCCC----CCCCCCceEEEecccchhcCCc--------cchhcceEEeccccccC-ccccEEEEEehhhh
Confidence            899999984 5444    1233577888886432222222        23366789999999985 66788888886532


Q ss_pred             hhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 037144          320 LLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF-GVANLRNFIRSHVGMAKLFERLVTSDKR  398 (502)
Q Consensus       320 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~la~~l~~~l~~~~~  398 (502)
                       .......|.-+.-...+.  ....++    |+++   |....+-+.++.+ ..-|+.++.+...+.++.+.+.|.+..|
T Consensus       223 -g~~~~~tP~v~dyk~~~~--NnSlyN----TpP~---f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~iD~s~g  292 (370)
T KOG2790|consen  223 -GNALDITPSVLDYKIMDK--NNSLYN----TPPC---FGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDAIDNSNG  292 (370)
T ss_pred             -cccccCCccccceeeecc--cccccc----CCCe---eeeeehhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence             222222222221111000  000000    1111   1222233445444 2345677777788899999999999878


Q ss_pred             eEEec-CC---CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEE
Q 037144          399 FEVAF-PR---NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVL  474 (502)
Q Consensus       399 ~~l~~-~~---~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~l  474 (502)
                      |-... +|   ....|+||+.++                            ++-.++.++-.+++.+-+.+  ++..+.+
T Consensus       293 fy~cpVe~~~RS~MNV~Fri~~d----------------------------~Le~eFLkeA~~~~mv~LKG--hRSVGGi  342 (370)
T KOG2790|consen  293 FYRCPVEPSVRSRMNVPFRIEKD----------------------------ELEAEFLKEAAKEHMVQLKG--HRSVGGI  342 (370)
T ss_pred             eEEcccchhhhhhcccceeecch----------------------------HHHHHHHHHHHHhhhhcccc--ccccccc
Confidence            86542 22   234689999764                            23345555554555432222  3446679


Q ss_pred             EEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          475 RFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       475 R~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      |.|+=|. .+-++++++++-+++..+.
T Consensus       343 RASlYNA-isv~~~q~L~~~m~~F~k~  368 (370)
T KOG2790|consen  343 RASLYNA-ISVEEVQKLAAFMKEFQKK  368 (370)
T ss_pred             hhhhhcc-ccHHHHHHHHHHHHHHHHh
Confidence            9998665 4556999999999887653

>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]

Probab=97.99  E-value=0.0033  Score=65.23  Aligned_cols=364  Identities=13%  Similarity=0.115  Sum_probs=182.7

Q ss_pred             chhHhhcCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCcccccCCCCCCHHHHHHHHHHh--hcC---CCCcccccCh
Q 037144           38 PGYLKKRLPESAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSS--GFN---VVGLDWISSP  112 (502)
Q Consensus        38 ~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~--~~n---~~~~~~~~~p  112 (502)
                      |.-++..-+..+| .|....+.++++.....++- -|.+=-=+||++. ..++.+...++.+  ++.   ++...-+.+.
T Consensus        85 P~~Ir~~~~l~~~-~~~~E~eml~~l~~ia~kNk-~~ksfIGmGYyn~-~vP~~I~RNilenp~W~TqYTPYQ~EIsQGR  161 (1001)
T KOG2040|consen   85 PKSIRLKRPLKMD-KPLCESEMLQHLEDIASKNK-IWKSFIGMGYYNT-HVPAVILRNILENPGWYTQYTPYQAEISQGR  161 (1001)
T ss_pred             chhhcccchhcCC-CCcCHHHHHHHHHHHHhhhh-HHHHhhccccccc-cCcHHHHHHhhhCCcceeccCCCchhhhhhh
Confidence            3344444444453 47888999999987654443 3433222455543 3334444444432  111   1111112222


Q ss_pred             hhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHH
Q 037144          113 AAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAA  192 (502)
Q Consensus       113 ~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa  192 (502)
                      .-+.+-.+  ..++++.|+|-..       ..+.--||.|--...++.+..          ++-..+++...|+-....+
T Consensus       162 LEsllNyQ--Tmi~dlTGL~~aN-------ASLLDEgTAaaEAm~l~~~~~----------krkk~vvd~~~hpqtlsV~  222 (1001)
T KOG2040|consen  162 LESLLNYQ--TMITDLTGLPMAN-------ASLLDEGTAAAEAMALCNRIN----------KRKKFVVDSNCHPQTLSVV  222 (1001)
T ss_pred             HHHHhhhH--HhhhhccCCcccc-------hhhhccchhHHHHHHHHHhhc----------ccceEEecCCCCcchhhhh
Confidence            22222223  5688999998542       222223343332111222221          2334778888997443333


Q ss_pred             ----HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEe
Q 037144          193 ----QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHV  268 (502)
Q Consensus       193 ----~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhV  268 (502)
                          .-+|+   .+...          |+++...-       .+...-|++..+. ..|.+.|.+++++.+++.|..+++
T Consensus       223 ~TRa~~~~i---~v~~~----------~~~~~~~s-------~~~v~gvlvQYP~-t~G~i~d~~el~~~a~~~~s~vv~  281 (1001)
T KOG2040|consen  223 KTRAKGFGI---KVVVS----------DIKEADYS-------SKDVSGVLVQYPD-TEGSVLDFDELVELAHANGSLVVM  281 (1001)
T ss_pred             hccccccce---eEEec----------CHHHhhcc-------ccceeEEEEEcCC-CCCcccCHHHHHHHhhccCceEEE
Confidence                33344   32222          22111111       1112345666655 468999999999999999887655


Q ss_pred             ecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcce-----EEEeeCchhhhhhhcCCcccccCccCCCCCccc
Q 037144          269 DAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCC-----CLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQ  343 (502)
Q Consensus       269 DaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g-----~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~  343 (502)
                      -.-.-+..++-|. .+.     +||....+.+.+ ++|.|-|     ++.+++.  +   ....|..+-.-..+   ..+
T Consensus       282 atDLLaLtiLrpP-gef-----GaDIavGSsQRF-GVPlGYGGPHAaFfAv~~~--l---~R~mPGRiiGvtkD---~~g  346 (1001)
T KOG2040|consen  282 ATDLLALTILRPP-GEF-----GADIAVGSSQRF-GVPLGYGGPHAAFFAVSES--L---VRMMPGRIIGVTKD---ALG  346 (1001)
T ss_pred             eehhhHHHccCCh-hhc-----Cceeeecccccc-CccccCCCchHHHHHHHHH--H---HhhCCCceEeeeec---ccc
Confidence            2211111111121 222     899999988875 4665544     3444321  1   12223333221111   000


Q ss_pred             ccCCCccccc----CCCCCC-------chHHHH---HHH--HhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCe
Q 037144          344 EVGYKDWQIT----LCRRFR-------SLKLWV---VIR--NFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNF  407 (502)
Q Consensus       344 ~~~~~~~~~~----~sr~~~-------al~~~~---~l~--~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~  407 (502)
                      ...+ ...+|    --||-.       |-++.+   ++.  ++|.+|++++.++....+-.|...|+.. |-+++..+-+
T Consensus       347 k~a~-RLALQTREQHIrRDKATSNICTAQALLANmaAmyaiYHGp~gL~~IArrvh~~T~~l~~~l~~a-ghel~~k~fF  424 (1001)
T KOG2040|consen  347 KEAY-RLALQTREQHIRRDKATSNICTAQALLANMAAMYAIYHGPHGLKEIARRVHNLTLILAEGLKNA-GHELQHKPFF  424 (1001)
T ss_pred             cHHH-HHHHHHHHHHhhhhccchhhhHHHHHHHHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHhhc-chhhcccccc
Confidence            0000 00111    123311       112222   221  2499999999999999999999999987 6888877766


Q ss_pred             eEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHH
Q 037144          408 SLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESH  487 (502)
Q Consensus       408 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~d  487 (502)
                      -++.++....                              .+++.++..++++-+   ..+ ..+.+-+++- ..++++|
T Consensus       425 DTLkI~~~~s------------------------------~~~~l~rA~~~~iNl---r~~-ed~tigvslD-ETv~~~D  469 (1001)
T KOG2040|consen  425 DTLKIRCGCS------------------------------AEEVLDRAAKRQINL---RLV-EDGTIGVSLD-ETVTEKD  469 (1001)
T ss_pred             ceEEEEecCc------------------------------HHHHHHHHHhhcCce---EEe-ecCceEEeec-ccccHHH
Confidence            6666666431                              223444443334211   111 1234666763 4577789


Q ss_pred             HHHHHHHHH
Q 037144          488 VRAAWTVVQ  496 (502)
Q Consensus       488 i~~~~~~l~  496 (502)
                      ++.++..+.
T Consensus       470 vddLl~vf~  478 (1001)
T KOG2040|consen  470 VDDLLWVFN  478 (1001)
T ss_pred             HHHHHHHHc
Confidence            999998775

>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]

Probab=97.59  E-value=0.013  Score=55.42  Aligned_cols=301  Identities=12%  Similarity=0.035  Sum_probs=158.1

Q ss_pred             cEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH------cCCCCCC---EEEEecCC--C
Q 037144          142 GGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI------VGIDRKN---IRAIKTTK--S  210 (502)
Q Consensus       142 ~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~------~Glg~~~---v~~v~~~~--~  210 (502)
                      ..+|+.+|||||-+|+..||+...        ..++|......|--+....++      -|-|..+   |+.-|+.+  .
T Consensus       104 vc~F~NSGSEANDLALRLAR~ftk--------hqDvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyr  175 (452)
T KOG1403|consen  104 VCFFVNSGSEANDLALRLARNFTK--------HQDVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYR  175 (452)
T ss_pred             EEEEecCCchhhHHHHHHHHhhcc--------cCceEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccc
Confidence            579999999999999999998531        345555554444222211111      1222222   33334421  0


Q ss_pred             CC-----------cccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHHHHHhCCEEEeecccccc
Q 037144          211 SS-----------YGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGS  275 (502)
Q Consensus       211 ~~-----------~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~~~~g~~lhVDaA~g~~  275 (502)
                      +.           +..-.+.+++.+++...+|......++.+-.+--|.+-|    ++++++..+.+|-.++.|..+-|+
T Consensus       176 GK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGF  255 (452)
T KOG1403|consen  176 GKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGF  255 (452)
T ss_pred             cccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcc
Confidence            11           123346677888777666665544455444455566644    678888888899999999998776


Q ss_pred             cccCccchh-hhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcC-CcccccCccCCCCCcccccCCCccccc
Q 037144          276 ACICPEFRH-FIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLST-NPQYLKNEATDQEPKEQEVGYKDWQIT  353 (502)
Q Consensus       276 ~~~~~~~~~-~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~~~  353 (502)
                      ......+.. .+-++ -.|.++..  |-++...+.+++..+.+  +.++|.. ...|+...                   
T Consensus       256 GRvG~hyWafq~y~f-iPDIVtmg--KpmGNGhPVa~Vattke--IA~Af~atgv~YFNTy-------------------  311 (452)
T KOG1403|consen  256 GRVGSHYWAFQTYNF-IPDIVTMG--KPMGNGHPVAAVATTKE--IAQAFHATGVEYFNTY-------------------  311 (452)
T ss_pred             cccchhhhhhhhhcc-ccchheec--ccCCCCCeeeEEeccHH--HHHHhccccceehhcc-------------------
Confidence            544332211 11111 35667654  66665556677665433  2345543 44565432                   


Q ss_pred             CCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEecCCC-eeE-EEEEeecCcchhhhhhcccCC
Q 037144          354 LCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD-KRFEVAFPRN-FSL-VCFRVTPSAVMDKLRTKYKNG  430 (502)
Q Consensus       354 ~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~-~~~~l~~~~~-~~~-v~f~~~~~~~~~~~~~~~~~~  430 (502)
                      ++.+.......+.++....+   ++.++..++.++|...|++. -..++++..+ .++ +-+.+..+..         .+
T Consensus       312 GGnPVsCAv~laVm~v~e~E---~Lq~ha~~vG~~L~~lL~~~k~kh~~IGDvRGvGLFiGIdLVkD~~---------tR  379 (452)
T KOG1403|consen  312 GGNPVSCAVGLAVMRVCEDE---NLQEHAQQVGEKLEVLLRRLKQKHECIGDVRGVGLFIGIDLVKDRK---------TR  379 (452)
T ss_pred             CCCchhHHHHHHHHHHHhhh---hHHHHHHHHHHHHHHHHHHHhhhccceeccccceEEEeeeeecccc---------cC
Confidence            12232333334455544444   44455566666666666543 1456665433 222 2222222110         01


Q ss_pred             CcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144          431 TYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHL  499 (502)
Q Consensus       431 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~  499 (502)
                      .++           .+....+..+|.+...+.++... ..+.+|.+-.--- -++++++.++..|.+++
T Consensus       380 tP~-----------tk~A~~~v~rlke~y~VLlsaDG-Ph~NilKiKPPmC-Fneena~e~v~~ld~iL  435 (452)
T KOG1403|consen  380 TPD-----------TKEAHWVVNRLKELYRVLLSADG-PHRNILKIKPPMC-FNEENADEFVLGLDEIL  435 (452)
T ss_pred             CCc-----------HHHHHHHHHHHHHhhhEEEecCC-CCCceeecCCCcc-cChhhHHHHHHHHHHHH
Confidence            111           12244566667666655554321 2345666543101 24557777777776654

>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]

Probab=97.39  E-value=0.012  Score=57.15  Aligned_cols=220  Identities=14%  Similarity=0.137  Sum_probs=117.8

Q ss_pred             CHHHHHHHHHHHHhcCCccEEEEEec----CCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCC-C
Q 037144          216 SAESVLSQINLDVEAELIPLFLCATV----GTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGV-E  290 (502)
Q Consensus       216 d~~~Le~~i~~~~~~g~~p~~Vv~t~----gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~-~  290 (502)
                      -++++|+.|.+-.++......+++.-    |.-..++-|-+..|.+||++||+-++||.++.|+..-..-|.+---++ .
T Consensus       254 Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~  333 (484)
T KOG1405|consen  254 CLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDS  333 (484)
T ss_pred             HHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCC
Confidence            46678888887765544334444433    344445557799999999999999999999876644333222211111 2


Q ss_pred             CCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCccc-ccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHH
Q 037144          291 CVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQY-LKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRN  369 (502)
Q Consensus       291 ~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~y-l~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~  369 (502)
                      -.|.+|++  |-|.    +|.++.. .     .|..+.+| +++.               |   ++-++..+-+-..++.
T Consensus       334 PpD~vTFS--KK~q----~gGffh~-~-----~frpn~pYrifNT---------------W---mGdP~k~lll~~vv~~  383 (484)
T KOG1405|consen  334 PPDVVTFS--KKFQ----TGGFFHD-E-----EFRPNEPYRIFNT---------------W---MGDPSKNLLLEEVVQE  383 (484)
T ss_pred             Cccceehh--hhhh----cCccccC-c-----ccCCCchHHHhhh---------------h---cCChHHHHHHHHHHHH
Confidence            47888876  4443    2223321 1     22233333 2211               1   2323344444445554


Q ss_pred             hcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhH
Q 037144          370 FGVANLRNFIRSHVGMAKLFERLVTS----DKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTN  445 (502)
Q Consensus       370 ~g~~g~~~~~~~~~~la~~l~~~l~~----~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  445 (502)
                      +.++   .++++.....++|..+|.+    .|+.---..-+..++.|..+.                            .
T Consensus       384 I~~~---~Ll~n~~~vG~~l~~gL~~Lq~~~p~~~~~~RGrGTF~a~d~ps----------------------------~  432 (484)
T KOG1405|consen  384 IKRE---DLLNNVAHVGKALLKGLLELQAKYPGKINNLRGRGTFIAWDCPS----------------------------G  432 (484)
T ss_pred             HhHH---HHHHHHHHHHHHHHHHHHHHHHhCchhhhcccccceEEEEeCCC----------------------------h
Confidence            4444   3455555666667666643    343210001133344554433                            2


Q ss_pred             HHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          446 EFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       446 ~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      .....+...+...|.. +.+   -|...+|+-.+-. -++.+.+-+++.+.++...
T Consensus       433 ~~Rdk~i~~~~~nGv~-~GG---Cg~~siRfRPsLv-f~~~Ha~i~l~~~~k~l~~  483 (484)
T KOG1405|consen  433 SIRDKLILIARLNGVN-LGG---CGDKSIRFRPSLV-FRKHHADIFLDIFDKILAG  483 (484)
T ss_pred             HHHHHHHHHHHHcCce-ecc---cccceeeecccee-ehhhhHHHHHHHHHHHhcc
Confidence            2344667777777753 222   2445677655422 3556899999999888764

>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]

Probab=97.34  E-value=0.048  Score=52.11  Aligned_cols=281  Identities=15%  Similarity=0.181  Sum_probs=153.2

Q ss_pred             cEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHH
Q 037144          142 GGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVL  221 (502)
Q Consensus       142 ~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le  221 (502)
                      .|+=+-|||-|+..+..-. ..++        .+-.||+|.+.........+..|.-  .+...+.=..++-.+|.+.+-
T Consensus       101 ~~vQslsGTGAl~~~A~Fl-~~~~--------~~~~VY~SnPTW~nH~~if~~aGf~--tv~~Y~yWd~~~k~~d~e~~L  169 (410)
T KOG1412|consen  101 FGVQSLSGTGALRIAADFL-ATFY--------NKNTVYVSNPTWENHHAIFEKAGFT--TVATYPYWDAENKCVDLEGFL  169 (410)
T ss_pred             cceeeccccchhhhhHHHH-HHhc--------ccceeEecCCchhHHHHHHHHcCCc--eeeeeeeecCCCceecHHHHH
Confidence            4666677887775543322 1222        3456999999877777777777741  444444422234578888888


Q ss_pred             HHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHHHHHhCCEEEeecccccccccCcc---c--hhhhc-CCCC
Q 037144          222 SQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGSACICPE---F--RHFID-GVEC  291 (502)
Q Consensus       222 ~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~---~--~~~~~-~~~~  291 (502)
                      ..|+......   ++|.-.+..|+|| +||    ..+|+++.++.++...-|-||-|++.--+.   +  +..+. |++ 
T Consensus       170 sdl~~APe~s---i~iLhaCAhNPTG-mDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e-  244 (410)
T KOG1412|consen  170 SDLESAPEGS---IIILHACAHNPTG-MDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFE-  244 (410)
T ss_pred             HHHhhCCCCc---EEeeeccccCCCC-CCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcCCe-
Confidence            8777655321   2233333578887 566    557899999999999999999887643222   1  11111 211 


Q ss_pred             CCeeEEccCCcCCC--C-CcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCC--CCchHHHHH
Q 037144          292 VDSFSFNPHKWLFT--T-LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRR--FRSLKLWVV  366 (502)
Q Consensus       292 aDsi~~~~hK~l~~--p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~--~~al~~~~~  366 (502)
                       =+++-++.|.++.  + .||--+.++++.......+...--+...                   .|.+  ++|--+...
T Consensus       245 -~fv~QSFaKNfGlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~-------------------~SNPPAyGArIV~kv  304 (410)
T KOG1412|consen  245 -LFVCQSFAKNFGLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSN-------------------WSNPPAYGARIVHKV  304 (410)
T ss_pred             -EEEEhhhhhhcccccccccceEEEecChhHHHHHHHHHHHHHhhc-------------------cCCCcchhhHHHHHH
Confidence             2567778898763  2 2333345566543222111111011100                   0000  011111111


Q ss_pred             H-----HHhcHHHHHHHHHHHHHHHHHHHHHHhcC--CC-eEEecCCCeeEEEEEeecCcchhhhhhcccCCCccccccc
Q 037144          367 I-----RNFGVANLRNFIRSHVGMAKLFERLVTSD--KR-FEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQF  438 (502)
Q Consensus       367 l-----~~~g~~g~~~~~~~~~~la~~l~~~l~~~--~~-~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~  438 (502)
                      |     +.--...+..+-.|..+++..|++.|..+  || +.-+ ..+.++++|.=.                       
T Consensus       305 L~tP~lre~W~~sik~MssRI~~MR~aLrd~L~aL~TPGtWDHI-~~QiGMFSyTGL-----------------------  360 (410)
T KOG1412|consen  305 LSTPELREQWIQSIKTMSSRIKKMRTALRDHLVALKTPGTWDHI-TQQIGMFSYTGL-----------------------  360 (410)
T ss_pred             hcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHH-HhhccceeecCC-----------------------
Confidence            1     11112345667778888999999998775  22 1111 135667666321                       


Q ss_pred             chhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144          439 SEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       439 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~  500 (502)
                               +..-.+.|.++..+++...   |    |++++..++  ..+|+...+|.+..+
T Consensus       361 ---------tp~qV~~li~~h~vyLl~~---G----RInisGLN~--~NveyVAkAIde~Vr  404 (410)
T KOG1412|consen  361 ---------TPAQVDHLIENHKVYLLSD---G----RINISGLNM--KNVEYVAKAIDETVR  404 (410)
T ss_pred             ---------CHHHHHHHHHhceEEEecC---C----cEeeecccc--ccHHHHHHHHHHHHH
Confidence                     2234566777777765542   2    677765433  367777777766654

>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species

Probab=96.84  E-value=0.028  Score=54.72  Aligned_cols=293  Identities=14%  Similarity=0.098  Sum_probs=134.3

Q ss_pred             HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH
Q 037144          115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI  194 (502)
Q Consensus       115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~  194 (502)
                      .+||+++ +.|-++.|--...     +.-++.+.|+.-++.|..-|+...    .....+...|+.+.+.++++....++
T Consensus        46 ~eL~~~I-r~LH~~VGNAvt~-----gr~IV~GtGsTQL~~AalyALSp~----~~~~~~p~~VVa~aPYY~~Y~~qt~~  115 (363)
T PF04864_consen   46 PELERQI-RRLHRVVGNAVTD-----GRYIVFGTGSTQLFNAALYALSPN----ASPSSSPASVVAAAPYYSSYPEQTDF  115 (363)
T ss_dssp             HHHHHHH-HHHHHHH-SB--T-----TSEEEEECHHHHHHHHHHHHHCHH----T-TTSSSEEEEE-SS--CHHHHHCCC
T ss_pred             HHHHHHH-HHHHHHhcccccc-----CcEEEEcCCHHHHHHHHHHhcCCC----CCCCCCCceeEecCCCccchHHHHHh
Confidence            4566543 4455555532211     123444444544555555444321    01111444555554444444445455


Q ss_pred             cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccccc
Q 037144          195 VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAG  274 (502)
Q Consensus       195 ~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~  274 (502)
                      +.-   ..-...-|.. .+.          ..   ....+++=++|.|+|+.|.+-.     .+++.-+..++-|=||-.
T Consensus       116 f~s---~~y~w~Gda~-~~~----------~~---~~~~~~IElVTSPNNPDG~lr~-----~V~~g~~~k~I~D~AYYW  173 (363)
T PF04864_consen  116 FDS---RLYKWAGDAS-NFK----------NS---DNPSPYIELVTSPNNPDGQLRE-----AVLNGSSGKVIHDLAYYW  173 (363)
T ss_dssp             T-B---TTEEEEEECC-CGT----------T----S-CCGEEEEEESS-TTT-----------SSTTTEEEEEEE-TT-S
T ss_pred             ccc---cCccccccHH-hhc----------cC---CCCCCeEEEEeCCCCCcccccc-----hhcCCCCcceeeeeeeec
Confidence            544   3344444331 121          11   1134678889999999997731     123444566788988754


Q ss_pred             ccc-cCccchhhhcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccc
Q 037144          275 SAC-ICPEFRHFIDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQI  352 (502)
Q Consensus       275 ~~~-~~~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~  352 (502)
                      ..+ +++.       -..-|.+-++.+|.=+ +....|+.++||++..+..    ..|+...                ++
T Consensus       174 PhyTpI~~-------~aD~DiMLFT~SK~TGHAGSR~GWAlVKD~~Va~kM----~~y~~ln----------------Ti  226 (363)
T PF04864_consen  174 PHYTPITA-------PADHDIMLFTLSKLTGHAGSRFGWALVKDEEVAKKM----TKYMELN----------------TI  226 (363)
T ss_dssp             TTTS---S--------B--SEEEEEHHHHCS-GGG-EEEEEES-HHHHHHH----HHHHHHH----------------CS
T ss_pred             ccccccCC-------CCCCceEEEEEecccCccccccceeeecCHHHHHHH----HHHHHHh----------------cc
Confidence            332 2221       1256889999999754 5567899999998765432    2454322                12


Q ss_pred             cCCCC--CCchHHHHHHHH-hcHH-----HHHHHHHHHHHHHHHHHHHHhcCCCeEEec-CCC-----------ee-EEE
Q 037144          353 TLCRR--FRSLKLWVVIRN-FGVA-----NLRNFIRSHVGMAKLFERLVTSDKRFEVAF-PRN-----------FS-LVC  411 (502)
Q Consensus       353 ~~sr~--~~al~~~~~l~~-~g~~-----g~~~~~~~~~~la~~l~~~l~~~~~~~l~~-~~~-----------~~-~v~  411 (502)
                      ..||-  .+++++..++.. ++.+     -+.=-.+...+.-++|++.+.+...|.+.. +|+           .+ .-.
T Consensus       227 GvS~dsQLRa~kiLk~v~~~~~~~~~~~~~F~f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAW  306 (363)
T PF04864_consen  227 GVSRDSQLRALKILKVVLDGYGTEKGTEDIFHFGYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAW  306 (363)
T ss_dssp             S--HHHHHHHHHHHHHHHHHCCHHTTTTSHHHHHHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEE
T ss_pred             cCcHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEE
Confidence            22321  355555544332 2221     111122334445566777787777788753 121           11 222


Q ss_pred             EEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC-CEEEEEEEecCCCCcHHHHHH
Q 037144          412 FRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG-GIYVLRFAAGNSMTMESHVRA  490 (502)
Q Consensus       412 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-g~~~lR~~~~~~~t~~~di~~  490 (502)
                      ++....+                          ++.+.++   |.+.|++--++..++ +..++|+|+.   -++++.+.
T Consensus       307 lkCe~ee--------------------------d~DC~~~---l~~~~I~tr~G~~fga~~ryVRlSml---~~~d~Fd~  354 (363)
T PF04864_consen  307 LKCEREE--------------------------DEDCYAV---LREAKIITRSGVLFGADSRYVRLSML---KRDDDFDQ  354 (363)
T ss_dssp             EEESSCG--------------------------GSSHHHH---HHCTTEEEEEGGGGTS-TTEEEEESS---S-HHHHHH
T ss_pred             EecCCcc--------------------------cccHHHH---HHhCCcccCCCCccCCCCCeEEEecc---CCHHHHHH
Confidence            2222111                          1113332   333354333333333 3569999986   46779999


Q ss_pred             HHHHHHHH
Q 037144          491 AWTVVQEH  498 (502)
Q Consensus       491 ~~~~l~~~  498 (502)
                      +++.|..+
T Consensus       355 l~~rL~~l  362 (363)
T PF04864_consen  355 LLERLSKL  362 (363)
T ss_dssp             HHHHHHCC
T ss_pred             HHHHHHhh
Confidence            99988754

Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.

>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]

Probab=96.47  E-value=0.024  Score=53.80  Aligned_cols=147  Identities=14%  Similarity=0.136  Sum_probs=93.4

Q ss_pred             HHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeE-EEeCCCCchhHHHHHHH--------
Q 037144          124 WLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLV-VYSSDQTHCAFQKAAQI--------  194 (502)
Q Consensus       124 ~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~-v~~s~~~H~s~~~aa~~--------  194 (502)
                      -.++.||.+....     .--|. +||.|+-+||.-...           |++. +++....+-..+....+        
T Consensus        73 vyA~vf~aE~a~V-----Rpq~i-sGTHAI~~aLfg~LR-----------pgDell~i~G~PYDTLeevIG~rg~~~gSL  135 (416)
T COG4100          73 VYAQVFGAEAALV-----RPQII-SGTHAIACALFGILR-----------PGDELLYITGSPYDTLEEVIGLRGEGQGSL  135 (416)
T ss_pred             HHHHHhcccccee-----eeeee-cchhHHHHHHHhccC-----------CCCeEEEecCCcchhHHHHhccCCCCcccH
Confidence            3788888875431     22333 357777555544332           4444 44555455555554433        


Q ss_pred             --cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEec----CCccccccCChhHHHHHHHHh--CCEE
Q 037144          195 --VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATV----GTTAITAVDPLKPLCDVAKQF--GIWV  266 (502)
Q Consensus       195 --~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~----gtt~~G~idpl~eI~~i~~~~--g~~l  266 (502)
                        .|+   ..+.||+..  +|.+|.+.++.++++.++      +|...-    .--+.-.+++|+++..+.|+.  ++.+
T Consensus       136 ~dfgi---~Y~~v~Lt~--~gkiD~~~v~~~i~~~tk------li~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~iv  204 (416)
T COG4100         136 KDFGI---KYKAVPLTA--DGKIDIQAVKTAISDRTK------LIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIV  204 (416)
T ss_pred             HHhCc---ceeeccccc--CCcccHHHHHHhcCccce------EEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEE
Confidence              344   567788775  469999999999998775      333322    223344568888888888875  6889


Q ss_pred             EeecccccccccCccchhhhcCCCCCCeeEEccCCcCC
Q 037144          267 HVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLF  304 (502)
Q Consensus       267 hVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~  304 (502)
                      .||-|||-+.-.. +.-+.     ++|.+..+.-|.-+
T Consensus       205 FVDNCYGEFvE~~-EPt~v-----GaDliAGSLIKNpG  236 (416)
T COG4100         205 FVDNCYGEFVEEK-EPTHV-----GADLIAGSLIKNPG  236 (416)
T ss_pred             EEeccchhhhhcc-Ccccc-----chhhhccceeeCCC
Confidence            9999997765322 22222     89999999888754

>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]

Probab=95.31  E-value=0.076  Score=51.56  Aligned_cols=259  Identities=13%  Similarity=0.151  Sum_probs=140.2

Q ss_pred             CCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc---C
Q 037144          174 SKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV---D  250 (502)
Q Consensus       174 ~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i---d  250 (502)
                      +.-.||++.++..-..+.-...|+   .+..+.........+|.+.+-+.+.+.....   ++++=.+.+|+||.=   +
T Consensus       145 ~~~~I~ip~PTWgNh~~if~~ag~---~~~~yrYyd~~t~gld~~g~ledl~~~p~gs---~ilLhaCaHNPTGvDPt~e  218 (427)
T KOG1411|consen  145 PSRDIYIPDPTWGNHKNIFKDAGL---PVKFYRYYDPKTRGLDFKGMLEDLGEAPEGS---IILLHACAHNPTGVDPTKE  218 (427)
T ss_pred             cccceeecCCcccccCccccccCc---ceeeeeeccccccccchHHHHHHHhcCCCCc---EEEeehhhcCCCCCCccHH
Confidence            455789998886555556667788   6665554333356788888777776654321   233333467888742   3


Q ss_pred             ChhHHHHHHHHhCCEEEeecccccccccCc---c--chhhhcCCCCCC-eeEEccCCcCCCC-CcceE--EEeeCchhhh
Q 037144          251 PLKPLCDVAKQFGIWVHVDAAYAGSACICP---E--FRHFIDGVECVD-SFSFNPHKWLFTT-LDCCC--LWVKDPSCLL  321 (502)
Q Consensus       251 pl~eI~~i~~~~g~~lhVDaA~g~~~~~~~---~--~~~~~~~~~~aD-si~~~~hK~l~~p-~~~g~--~~~r~~~~l~  321 (502)
                      ..++|.++.++.+..-..|.||-|+..-..   .  .|..+..  +-+ .++-++-|.++.- -..|.  +++++.+...
T Consensus       219 qw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~--g~~~~laQSyAKNMGLYgERvGa~svvc~~ad~A~  296 (427)
T KOG1411|consen  219 QWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVED--GHEILLAQSYAKNMGLYGERVGALSVVCKDADEAK  296 (427)
T ss_pred             HHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHc--CCceEeehhhhhhcchhhhccceeEEEecCHHHHH
Confidence            477888999999999999999988764321   1  1111110  112 4566677887522 12233  4455543322


Q ss_pred             hhh-----cCCcccccCccCCCCCcccccCCCcccccCCCCCCc-hHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc
Q 037144          322 STL-----STNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRS-LKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTS  395 (502)
Q Consensus       322 ~~~-----~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~a-l~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~  395 (502)
                      +.-     -..+-|-...                 +.++|-..- +. -..|+.--..-...+.+|.+.+++.|.+.|..
T Consensus       297 rV~SQlk~liRpmYSnPP-----------------~hGArIv~~Il~-d~~l~~~W~~evk~MadRi~~mR~~L~d~L~~  358 (427)
T KOG1411|consen  297 RVESQLKILIRPMYSNPP-----------------LHGARIVATILS-DPDLKNQWLGEVKGMADRIISMRQQLFDALEK  358 (427)
T ss_pred             HHHHHHHHHhcccccCCC-----------------ccchhhhhhccC-ChHHHHHHHHHHHHHHHhhhhhHHHHhHHhhc
Confidence            111     0112221110                 111111100 00 00111111223456778889999999999977


Q ss_pred             CCCeEEec---CCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEE
Q 037144          396 DKRFEVAF---PRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIY  472 (502)
Q Consensus       396 ~~~~~l~~---~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~  472 (502)
                      . |-..-.   ..+.+++||.-..                                .+-.+.|.++-.++++.   +   
T Consensus       359 ~-gs~~~W~hI~~QIGMF~fTgl~--------------------------------peQv~~l~ke~~iYmT~---d---  399 (427)
T KOG1411|consen  359 E-GSPGNWSHITKQIGMFCFTGLN--------------------------------PEQVDWLTKEYHIYLTK---D---  399 (427)
T ss_pred             C-CCCccHHHHHHhhheeeecCCC--------------------------------HHHHHHHHhhheeeecc---C---
Confidence            5 322200   2467899985432                                23345555556555554   2   


Q ss_pred             EEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144          473 VLRFAAGNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       473 ~lR~~~~~~~t~~~di~~~~~~l~~~~~  500 (502)
                       -|+|+.+. ++ ..+.++.++|.++.+
T Consensus       400 -GRiS~aG~-ss-~nV~yLa~aih~vtk  424 (427)
T KOG1411|consen  400 -GRISMAGL-SS-SNVPYLADAIHAVTK  424 (427)
T ss_pred             -ceEeeccc-cc-cCCcccchhhHhHhc
Confidence             27787654 33 368888888877653

>PLN02994 1-aminocyclopropane-1-carboxylate synthase

Probab=92.73  E-value=0.26  Score=43.12  Aligned_cols=63  Identities=5%  Similarity=-0.014  Sum_probs=46.3

Q ss_pred             cccChhhHHHHHHHHHHHHHhcC--CCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCc
Q 037144          108 WISSPAAVELENIVMDWLGQMLD--LPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTH  185 (502)
Q Consensus       108 ~~~~p~~~~le~~~~~~l~~l~g--~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H  185 (502)
                      |....+..++.+.+++|+.+.+|  .+-..     ...++|+|++.++..++.+..+           +++.|++..+.+
T Consensus        88 Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~p-----d~Ivvt~Ga~~al~~l~~~l~d-----------pGD~VlVp~P~Y  151 (153)
T PLN02994         88 FQDYHGLANFRKAIANFMAEARGGRVKFDA-----DMIVLSAGATAANEIIMFCIAD-----------PGDAFLVPTPYY  151 (153)
T ss_pred             CCCCCCcHHHHHHHHHHHHHHhCCCCccch-----hheEEcCCHHHHHHHHHHHHcC-----------CCCEEEEeCCCC
Confidence            44445678899999999999988  32111     2689999999998777766654           678888887665


Q ss_pred             h
Q 037144          186 C  186 (502)
Q Consensus       186 ~  186 (502)
                      .
T Consensus       152 ~  152 (153)
T PLN02994        152 A  152 (153)
T ss_pred             C
Confidence            3

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	502
3rbf_A	480	Crystal Structure Of Human Aromatic L-Amino Acid De		1e-105
3rch_A	480	Crystal Structure Of Human Aromatic L-Amino Acid De		1e-104
1js3_A	486	Crystal Structure Of Dopa Decarboxylase In Complex		1e-100
3k40_A	475	Crystal Structure Of Drosophila 3,4-Dihydroxyphenyl		9e-99
4e1o_A	481	Human Histidine Decarboxylase Complex With Histidin		6e-95
3vp6_A	511	Structural Characterization Of Glutamic Acid Decarb		3e-30
2okj_A	504	The X-Ray Crystal Structure Of The 67kda Isoform Of		2e-29
2jis_A	515	Human Cysteine Sulfinic Acid Decarboxylase (Csad) I		3e-29
2okk_A	497	The X-Ray Crystal Structure Of The 65kda Isoform Of		3e-26
2qma_A	497	Crystal Structure Of Glutamate Decarboxylase Domain		2e-21
3f9t_A	397	Crystal Structure Of L-tyrosine Decarboxylase Mfna		5e-04

>pdb|3RBF|A Chain A, Crystal Structure Of Human Aromatic L-Amino Acid Decarboxylase (Aadc) In The Apo Form Length = 480

Iteration: 1
 Score =  377 bits (968), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 197/502 (39%), Positives = 275/502 (54%), Gaps = 45/502 (8%)
Query: 6   AQEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQE 65
           A EFRR+G   VD++A Y + I+   V   VEPGYL+  +P +AP  P++ E I+ DV++
Sbjct: 3   ASEFRRRGKEMVDYVANYMEGIEGRQVYPDVEPGYLRPLIPAAAPQEPDTFEDIINDVEK 62
Query: 66  HIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWL 125
            I+PG+THW SP +FAYFP  SS   ++ +ML      +G  W +SPA  ELE ++MDWL
Sbjct: 63  IIMPGVTHWHSPYFFAYFPTASSYPAMLADMLCGAIGCIGFSWAASPACTELETVMMDWL 122
Query: 126 GQMLDLPKSFLF--SGNGGGVIQGXXXXXXXXXXXXXRDRVLKKIGREN--------ISK 175
           G+ML+LPK+FL   +G GGGVIQG             R +V+ ++   +        + K
Sbjct: 123 GKMLELPKAFLNEKAGEGGGVIQGSASEATLVALLAARTKVIHRLQAASPELTQAAIMEK 182
Query: 176 LVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPL 235
           LV YSSDQ H + ++A  I G+  K I         ++ + A ++   +  D  A LIP 
Sbjct: 183 LVAYSSDQAHSSVERAGLIGGVKLKAI-----PSDGNFAMRASALQEALERDKAAGLIPF 237
Query: 236 FLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSF 295
           F+ AT+GTT   + D L  +  +  +  IW+HVDAAYAGSA ICPEFRH ++GVE  DSF
Sbjct: 238 FMVATLGTTTCCSFDNLLEVGPICNKEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSF 297
Query: 296 SFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLC 355
           +FNPHKWL    DC  +WVK  + L      +P YLK+   D         Y+ WQI L 
Sbjct: 298 NFNPHKWLLVNFDCSAMWVKKRTDLTGAFRLDPTYLKHSHQDS---GLITDYRHWQIPLG 354
Query: 356 RRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVT 415
           RRFRSLK+W V R +GV  L+ +IR HV ++  FE LV  D RFE+       LVCFR+ 
Sbjct: 355 RRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFESLVRQDPRFEICVEVILGLVCFRLK 414
Query: 416 PSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLR 475
            S                           N+ N  LL+ IN + K+ +    +   +VLR
Sbjct: 415 GS---------------------------NKVNEALLQRINSAKKIHLVPCHLRDKFVLR 447
Query: 476 FAAGNSMTMESHVRAAWTVVQE 497
           FA  +     +HV+ AW  ++E
Sbjct: 448 FAICSRTVESAHVQRAWEHIKE 469

>pdb|3RCH|A Chain A, Crystal Structure Of Human Aromatic L-Amino Acid Decarboxylase (Aadc) In The Open Conformation With Llp And Plp Bound To Chain-A And Chain- B Respectively Length = 480

Iteration: 1
 Score =  375 bits (962), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 196/502 (39%), Positives = 274/502 (54%), Gaps = 45/502 (8%)
Query: 6   AQEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQE 65
           A EFRR+G   VD++A Y + I+   V   VEPGYL+  +P +AP  P++ E I+ DV++
Sbjct: 3   ASEFRRRGKEMVDYVANYMEGIEGRQVYPDVEPGYLRPLIPAAAPQEPDTFEDIINDVEK 62
Query: 66  HIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWL 125
            I+PG+THW SP +FAYFP  SS   ++ +ML      +G  W +SPA  ELE ++MDWL
Sbjct: 63  IIMPGVTHWHSPYFFAYFPTASSYPAMLADMLCGAIGCIGFSWAASPACTELETVMMDWL 122
Query: 126 GQMLDLPKSFLF--SGNGGGVIQGXXXXXXXXXXXXXRDRVLKKIGREN--------ISK 175
           G+ML+LPK+FL   +G GGGVIQG             R +V+ ++   +        + K
Sbjct: 123 GKMLELPKAFLNEKAGEGGGVIQGSASEATLVALLAARTKVIHRLQAASPELTQAAIMEK 182
Query: 176 LVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPL 235
           LV YSSDQ H + ++A  I G+  K I         ++ + A ++   +  D  A LIP 
Sbjct: 183 LVAYSSDQAHSSVERAGLIGGVKLKAI-----PSDGNFAMRASALQEALERDKAAGLIPF 237
Query: 236 FLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSF 295
           F+ AT+GTT   + D L  +  +  +  IW+HVDAAYAGSA ICPEFRH ++GVE  DSF
Sbjct: 238 FMVATLGTTTCCSFDNLLEVGPICNKEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSF 297
Query: 296 SFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLC 355
           +FNPH WL    DC  +WVK  + L      +P YLK+   D         Y+ WQI L 
Sbjct: 298 NFNPHXWLLVNFDCSAMWVKKRTDLTGAFRLDPTYLKHSHQDS---GLITDYRHWQIPLG 354
Query: 356 RRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVT 415
           RRFRSLK+W V R +GV  L+ +IR HV ++  FE LV  D RFE+       LVCFR+ 
Sbjct: 355 RRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFESLVRQDPRFEICVEVILGLVCFRLK 414
Query: 416 PSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLR 475
            S                           N+ N  LL+ IN + K+ +    +   +VLR
Sbjct: 415 GS---------------------------NKVNEALLQRINSAKKIHLVPCHLRDKFVLR 447
Query: 476 FAAGNSMTMESHVRAAWTVVQE 497
           FA  +     +HV+ AW  ++E
Sbjct: 448 FAICSRTVESAHVQRAWEHIKE 469

>pdb|1JS3|A Chain A, Crystal Structure Of Dopa Decarboxylase In Complex With The Inhibitor Carbidopa Length = 486

Iteration: 1
 Score =  362 bits (929), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 195/501 (38%), Positives = 274/501 (54%), Gaps = 45/501 (8%)
Query: 6   AQEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQE 65
           A +FRR+G   VD+MA+Y + I+   V   V+PGYL+  +P +AP  P++ E ILQDV++
Sbjct: 3   ASDFRRRGKEMVDYMADYLEGIEGRQVYPDVQPGYLRPLIPATAPQEPDTFEDILQDVEK 62
Query: 66  HIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWL 125
            I+PG+THW SP +FAYFP  SS   ++ +ML      +G  W +SPA  ELE ++MDWL
Sbjct: 63  IIMPGVTHWHSPYFFAYFPTASSYPAMLADMLCGAIGCIGFSWAASPACTELETVMMDWL 122
Query: 126 GQMLDLPKSFL--FSGNGGGVIQGXXXXXXXXXXXXXRDRVLKKIGREN--------ISK 175
           G+ML LP++FL   +G GGGVIQG             R +V++++   +        + K
Sbjct: 123 GKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEK 182
Query: 176 LVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPL 235
           LV Y+SDQ H + ++A  I G+  K I          + + A ++   +  D  A LIP 
Sbjct: 183 LVAYASDQAHSSVERAGLIGGVKLKAI-----PSDGKFAMRASALQEALERDKAAGLIPF 237
Query: 236 FLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSF 295
           F+ AT+GTT+  + D L  +  +  +  IW+HVDAAYAGSA ICPEFRH ++GVE  DSF
Sbjct: 238 FVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSF 297
Query: 296 SFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLC 355
           +FNPHKWL    DC  +WVK  + L      +P YLK+     +       Y+ WQ+ L 
Sbjct: 298 NFNPHKWLLVNFDCSAMWVKRRTDLTGAFKLDPVYLKH---SHQGSGLITDYRHWQLPLG 354
Query: 356 RRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVT 415
           RRFRSLK+W V R +GV  L+ +IR HV ++  FE  V  D RFEV       LVCFR+ 
Sbjct: 355 RRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQDPRFEVCAEVTLGLVCFRLK 414
Query: 416 PSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLR 475
            S                           +  N  LLE IN + K+ +    + G +VLR
Sbjct: 415 GS---------------------------DGLNEALLERINSARKIHLVPCRLRGQFVLR 447
Query: 476 FAAGNSMTMESHVRAAWTVVQ 496
           FA  +      HVR AW  ++
Sbjct: 448 FAICSRKVESGHVRLAWEHIR 468

>pdb|3K40|A Chain A, Crystal Structure Of Drosophila 3,4-Dihydroxyphenylalanine Decarboxylase Length = 475

Iteration: 1
 Score =  357 bits (916), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 192/500 (38%), Positives = 270/500 (54%), Gaps = 48/500 (9%)
Query: 6   AQEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQE 65
           A EF+      VDF+AEY +NI +  V  +V+PGYLK  +P++AP  PE  + ++QD++ 
Sbjct: 3   APEFKDFAKTMVDFIAEYLENIRERRVLPEVKPGYLKPLIPDAAPEKPEKWQDVMQDIER 62
Query: 66  HIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWL 125
            I+PG+THW SP + AYFP  +S   IV +MLS     +G  WI+SPA  ELE ++MDWL
Sbjct: 63  VIMPGVTHWHSPKFHAYFPTANSYPAIVADMLSGAIACIGFTWIASPACTELEVVMMDWL 122
Query: 126 GQMLDLPKSFLFSG--NGGGVIQGXXXXXXXXXXXXXRDRVLKKIGREN--------ISK 175
           G+ML+LP  FL      GGGVIQG             + + LK++   +        + K
Sbjct: 123 GKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGK 182
Query: 176 LVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPL 235
           LV Y SDQ H + ++A  + G+    +R++++      G + E  + Q   DV   LIP 
Sbjct: 183 LVGYCSDQAHSSVERAGLLGGV---KLRSVQSENHRMRGAALEKAIEQ---DVAEGLIPF 236
Query: 236 FLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSF 295
           +   T+GTT   A D L     V  +  +W+HVDAAYAGSA ICPE+RH + G+E  DSF
Sbjct: 237 YAVVTLGTTNSCAFDYLDECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSF 296
Query: 296 SFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLC 355
           +FNPH W+    DC  +W+KDPS +++  + +P YLK++     P      Y+ WQI L 
Sbjct: 297 NFNPHXWMLVNFDCSAMWLKDPSWVVNAFNVDPLYLKHDMQGSAPD-----YRHWQIPLG 351
Query: 356 RRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVT 415
           RRFR+LKLW V+R +GV NL+  IR H   AK F  L  +D RFE+A   N  LVCFR+ 
Sbjct: 352 RRFRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVADSRFELAAEINMGLVCFRLK 411
Query: 416 PSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLR 475
            S                           NE N  LL+ IN  G + +  A +  +Y LR
Sbjct: 412 GS---------------------------NERNEALLKRINGRGHIHLVPAKIKDVYFLR 444
Query: 476 FAAGNSMTMESHVRAAWTVV 495
            A  +  T    +  +W  V
Sbjct: 445 MAICSRFTQSEDMEYSWKEV 464

>pdb|4E1O|A Chain A, Human Histidine Decarboxylase Complex With Histidine Methyl Ester (Hme) Length = 481

Iteration: 1
 Score =  344 bits (883), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 184/506 (36%), Positives = 272/506 (53%), Gaps = 56/506 (11%)
Query: 7   QEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQEH 66
           +E+R +G   VD++ +Y   + +  V   V+PGYL+ +LPESAP  P+S ++I  D++  
Sbjct: 9   EEYRERGREMVDYICQYLSTVRERRVTPDVQPGYLRAQLPESAPEDPDSWDSIFGDIERI 68
Query: 67  IVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLG 126
           I+PG+ HWQSP+  AY+PA +S   ++G+ML+   N +G  W SSPA  ELE  VMDWL 
Sbjct: 69  IMPGVVHWQSPHMHAYYPALTSWPSLLGDMLADAINCLGFTWASSPACTELEMNVMDWLA 128
Query: 127 QMLDLPKSFLF---SGNGGGVIQGXXXXXXXXXXXXXR-DRVLKKIGRENI-------SK 175
           +ML LP+ FL    S  GGGV+Q              R +++L+    E         ++
Sbjct: 129 KMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESSLNAR 188
Query: 176 LVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPL 235
           LV Y+SDQ H + +KA  I  +  K +         ++ L  E++   I  D +  L+P+
Sbjct: 189 LVAYASDQAHSSVEKAGLISLVKMKFLPV-----DDNFSLRGEALQKAIEEDKQRGLVPV 243
Query: 236 FLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSF 295
           F+CAT+GTT + A D L  L  +  + G+W+H+DAAYAG+A +CPEFR F+ G+E  DSF
Sbjct: 244 FVCATLGTTGVCAFDXLSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSF 303
Query: 296 SFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNE----ATDQEPKEQEVGYKDWQ 351
           +FNP KW+    DC   WVKD   L  T S NP YL++     ATD         +  WQ
Sbjct: 304 TFNPSKWMMVHFDCTGFWVKDKYKLQQTFSVNPIYLRHANSGVATD---------FMHWQ 354
Query: 352 ITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVC 411
           I L RRFRS+KLW VIR+FGV NL+  +R    MAK FE LV +D  FE+   R+  LV 
Sbjct: 355 IPLSRRFRSVKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRNDPSFEIPAKRHLGLVV 414
Query: 412 FRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGI 471
           FR+                           +  N     +L+ I  +G++F+  A +   
Sbjct: 415 FRL---------------------------KGPNSLTENVLKEIAKAGRLFLIPATIQDK 447
Query: 472 YVLRFAAGNSMTMESHVRAAWTVVQE 497
            ++RF   +  T    +   W ++++
Sbjct: 448 LIIRFTVTSQFTTRDDILRDWNLIRD 473

>pdb|3VP6|A Chain A, Structural Characterization Of Glutamic Acid Decarboxylase; Insights Into The Mechanism Of Autoinactivation Length = 511

Iteration: 1
 Score =  129 bits (324), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 94/383 (24%), Positives = 170/383 (44%), Gaps = 38/383 (9%)
Query: 53  PESVETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSP 112
           PES+E IL D ++ +  G+     P +F        + G+ GE L+S  N     +  +P
Sbjct: 73  PESLEQILVDCRDTLKYGVRTGH-PRFFNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAP 131
Query: 113 AAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGXXXXXXXXXXXXXRDRVLKKI---G 169
             V +E I +  + +++        S +G G+                R +   ++   G
Sbjct: 132 VFVLMEQITLKKMREIVGWS-----SKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKG 186
Query: 170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVE 229
              + KLV+++S+Q+H + +KA   +G    N+  IK  +              I  D E
Sbjct: 187 MAAVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKCNERGKI----------IPADFE 236
Query: 230 AEL--------IPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPE 281
           A++        +P ++ AT GTT   A DP++ + D+ +++ +W+HVDAA+ G   +  +
Sbjct: 237 AKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRK 296
Query: 282 FRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPK 341
            RH ++G+E  +S ++NPH  +   L C  + VK+   L      +  YL      Q+ K
Sbjct: 297 HRHKLNGIERANSVTWNPHXMMGVLLQCSAILVKEKGILQGCNQMHASYLF-----QQDK 351
Query: 342 EQEVGYK--DWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRF 399
             +V Y   D  I   R     K W++ +  G     N I   + +A+     + + + F
Sbjct: 352 HYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEF 411
Query: 400 EVAF---PRNFSLVCFRVTPSAV 419
           E+ F   P + + VCF   P ++
Sbjct: 412 EMVFNGEPEHTN-VCFWYIPQSL 433

>pdb|2OKJ|A Chain A, The X-Ray Crystal Structure Of The 67kda Isoform Of Glutamic Acid Decarboxylase (Gad67) Length = 504

Iteration: 1
 Score =  127 bits (318), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/383 (24%), Positives = 169/383 (44%), Gaps = 38/383 (9%)
Query: 53  PESVETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSP 112
           PES+E IL D ++ +  G+     P +F        + G+ GE L+S  N     +  +P
Sbjct: 70  PESLEQILVDCRDTLKYGVRTGH-PRFFNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAP 128
Query: 113 AAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGXXXXXXXXXXXXXRDRVLKKI---G 169
             V +E I +  + +++        S +G G+                R +   ++   G
Sbjct: 129 VFVLMEQITLKKMREIVGWS-----SKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKG 183
Query: 170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVE 229
              + KLV+++S+Q+H + +KA   +G    N+  IK  +              I  D E
Sbjct: 184 MAAVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKCNERGKI----------IPADFE 233
Query: 230 AEL--------IPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPE 281
           A++        +P ++ AT GTT   A DP++ + D+ +++ +W+HVDAA+ G   +  +
Sbjct: 234 AKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRK 293
Query: 282 FRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPK 341
            RH ++G+E  +S ++NPH  +   L C  + VK+   L         YL      Q  K
Sbjct: 294 HRHKLNGIERANSVTWNPHXMMGVLLQCSAILVKEKGILQGCNQMCAGYLF-----QPDK 348
Query: 342 EQEVGYK--DWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRF 399
           + +V Y   D  I   R     K W++ +  G     N I   + +A+     + + + F
Sbjct: 349 QYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEF 408
Query: 400 EVAF---PRNFSLVCFRVTPSAV 419
           E+ F   P + + VCF   P ++
Sbjct: 409 EMVFNGEPEHTN-VCFWYIPQSL 430

>pdb|2JIS|A Chain A, Human Cysteine Sulfinic Acid Decarboxylase (Csad) In Complex With Plp. Length = 515

Iteration: 1
 Score =  126 bits (316), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 103/393 (26%), Positives = 169/393 (43%), Gaps = 23/393 (5%)
Query: 37  EPGYLKKRLPESAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEM 96
           EP  LK+ L        ES + IL+  +  I   +     P +F    +      + G +
Sbjct: 70  EPEELKQLLDLELRSQGESQKQILERCRAVIRYSVKTGH-PRFFNQLFSGLDPHALAGRI 128
Query: 97  LSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNG----GGVIQGXXXXX 152
           ++   N     +  +P  V +E  V+  L  ++        SG+G    GG I       
Sbjct: 129 ITESLNTSQYTYEIAPVFVLMEEEVLRKLRALVGWS-----SGDGIFCPGGSISNMYAVN 183
Query: 153 XXXXXXXXRDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSS 212
                   R    K+ G   +  L +++S + H + QK A  +G+   ++R +K  +   
Sbjct: 184 LARYQ---RYPDCKQRGLRTLPPLALFTSKECHYSIQKGAAFLGLGTDSVRVVKADERGK 240
Query: 213 YGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAY 272
             +  E +  QI +      +P  + AT GTT + A DPL+ + DV ++ G+W+HVDAA+
Sbjct: 241 --MVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHVDAAW 298
Query: 273 AGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTL-STNPQYL 331
            GS  +    RH +DG++  DS ++NPHK L   L C  L ++D S LL     +   YL
Sbjct: 299 GGSVLLSQTHRHLLDGIQRADSVAWNPHKLLAAGLQCSALLLQDTSNLLKRCHGSQASYL 358
Query: 332 KNEATDQEPKEQEVGYK--DWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLF 389
                 Q+ K  +V     D  +   RR   LKLW++ +  G   L   I     +A+  
Sbjct: 359 F-----QQDKFYDVALDTGDKVVQCGRRVDCLKLWLMWKAQGDQGLERRIDQAFVLARYL 413
Query: 390 ERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDK 422
              +   + FE+     F  VCF   P ++  K
Sbjct: 414 VEEMKKREGFELVMEPEFVNVCFWFVPPSLRGK 446

>pdb|2OKK|A Chain A, The X-Ray Crystal Structure Of The 65kda Isoform Of Glutamic Acid Decarboxylase (Gad65) Length = 497

Iteration: 1
 Score =  116 bits (290), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 88/376 (23%), Positives = 169/376 (44%), Gaps = 24/376 (6%)
Query: 53  PESVETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSP 112
           P+++E IL   Q  +   I     P YF        + G+  + L+S  N     +  +P
Sbjct: 66  PQNLEEILMHCQTTLKYAIKTGH-PRYFNQLSTGLDMVGLAADWLTSTANTNMFTYEIAP 124
Query: 113 AAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGXXXXXXXXXXXXXRDRV---LKKIG 169
             V LE + +  + +++  P      G+G G+                R ++   +K+ G
Sbjct: 125 VFVLLEYVTLKKMREIIGWP-----GGSGDGIFSPGGAISNMYAMMIARFKMFPEVKEKG 179
Query: 170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVE 229
              + +L+ ++S+ +H + +K A  +GI   ++  IK  +    G    S L +  L+ +
Sbjct: 180 MAALPRLIAFTSEHSHFSLKKGAAALGIGTDSVILIKCDER---GKMIPSDLERRILEAK 236
Query: 230 AE-LIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDG 288
            +  +P  + AT GTT   A DPL  + D+ K++ IW+HVDAA+ G   +  + +  + G
Sbjct: 237 QKGFVPFLVSATAGTTVYGAFDPLLAVADICKKYKIWMHVDAAWGGGLLMSRKHKWKLSG 296
Query: 289 VECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYK 348
           VE  +S ++NPH  +   L C  L V++   + +    +  YL      Q+ K  ++ Y 
Sbjct: 297 VERANSVTWNPHXMMGVPLQCSALLVREEGLMQNCNQMHASYLF-----QQDKHYDLSYD 351
Query: 349 --DWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAF--- 403
             D  +   R     KLW++ R  G       +   + +A+    ++ + + +E+ F   
Sbjct: 352 TGDKALQCGRHVDVFKLWLMWRAKGTTGFEAHVDKCLELAEYLYNIIKNREGYEMVFDGK 411
Query: 404 PRNFSLVCFRVTPSAV 419
           P++ + VCF   P ++
Sbjct: 412 PQHTN-VCFWYIPPSL 426

>pdb|2QMA|A Chain A, Crystal Structure Of Glutamate Decarboxylase Domain Of Diaminobutyrate-Pyruvate Transaminase And L-2,4-Diaminobutyrate Decarboxylase From Vibrio Parahaemolyticus Length = 497

Iteration: 1
 Score =  100 bits (248), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 96/374 (25%), Positives = 159/374 (42%), Gaps = 16/374 (4%)
Query: 56  VETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAV 115
           +++++ DV E +       Q P+  A+         +  E   +  N     W  + +A 
Sbjct: 80  LKSVIDDVAELVAKNAIFTQHPDCIAHLHTPPLXPAVAAEAXIAALNQSXDSWDQASSAT 139
Query: 116 ELENIVMDWLGQMLDLPKSF--LFSGNGGGVIQGXXXXXXXXXXXXXRDRVLKKIGRENI 173
            +E  V++WL    DL +    +F+  G    Q                  ++K+G  + 
Sbjct: 140 YVEQKVVNWLCDKYDLSEKADGIFTSGGTQSNQXGLXLARDWIADKLSGHSIQKLGLPDY 199
Query: 174 S-KLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAE- 231
           + KL +  S ++H   QK+A   G+  K   A+ T  +++ G    + L ++    +AE 
Sbjct: 200 ADKLRIVCSKKSHFTVQKSASWXGLGEK---AVXTVDANADGTXDITKLDEVIAQAKAEG 256
Query: 232 LIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEC 291
           LIP  +  T GTT   A+D L  + D A +   W HVD AY G A I    +  + GVE 
Sbjct: 257 LIPFAIVGTAGTTDHGAIDDLDFIADXAVKHDXWXHVDGAYGG-ALILSSHKSRLKGVER 315
Query: 292 VDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQ 351
             S S + HK  + T+ C  L V D S     L  +  YL N   D+ P        D  
Sbjct: 316 AHSISVDFHKLFYQTISCGALLVNDKSN-FKFLLHHADYL-NREHDELPN-----LVDKS 368
Query: 352 ITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVC 411
           I   +RF +LK++   +N G   L +     +         + ++ +FE+    + S V 
Sbjct: 369 IATTKRFDALKVFXTXQNVGPKALGDXYDHLLAQTLEVADXIRTNDQFELLAEPSLSTVL 428
Query: 412 FRVT-PSAVMDKLR 424
           FR T  +A +D+L 
Sbjct: 429 FRATHETADLDELN 442

>pdb|3F9T|A Chain A, Crystal Structure Of L-tyrosine Decarboxylase Mfna (ec 4.1.1.25) (np_247014.1) From Methanococcus Jannaschii At 2.11 A Resolution Length = 397

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 7/72 (9%)
Query: 237 LCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE------ 290
           +    GTT +  +D ++ L  +AK+  I++HVDAA+ G      + ++   GV       
Sbjct: 175 IIGIAGTTELGTIDNIEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFS 234
Query: 291 -CVDSFSFNPHK 301
             VDS + +PHK
Sbjct: 235 LGVDSITIDPHK 246

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	502
1js3_A	486	DDC;, DOPA decarboxylase; carbidopa, parkinson'S d	0.0
3k40_A	475	Aromatic-L-amino-acid decarboxylase; PLP dependent	0.0
4e1o_A	481	HDC, histidine decarboxylase; lyase; HET: PLP PVH;	0.0
2okj_A	504	Glutamate decarboxylase 1; PLP-dependent decarboxy	0.0
2jis_A	515	Cysteine sulfinic acid decarboxylase; pyridoxal ph	0.0
2qma_A	497	Diaminobutyrate-pyruvate transaminase and L-2,4- d	0.0
3mc6_A	497	Sphingosine-1-phosphate lyase; carboxy-lyase activ	6e-44
3mad_A	514	Sphingosine-1-phosphate lyase; carboxy-lyase activ	1e-41
2z67_A	456	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	6e-36
3f9t_A	397	TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L	1e-33
3hbx_A	502	GAD 1, glutamate decarboxylase 1; calmodulin-bindi	6e-33
2dgk_A	452	GAD-beta, GADB, glutamate decarboxylase beta; gadb	2e-23
3bc8_A	450	O-phosphoseryl-tRNA(SEC) selenium transferase; dis	3e-07
3hl2_A	501	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	2e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-05

>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A* Length = 486

 Score =  597 bits (1540), Expect = 0.0
 Identities = 202/510 (39%), Positives = 285/510 (55%), Gaps = 48/510 (9%)

Query: 1   MDQAYAQEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETIL 60
           M+   A +FRR+G   VD+MA+Y + I+   V   V+PGYL+  +P +AP  P++ E IL
Sbjct: 1   MN---ASDFRRRGKEMVDYMADYLEGIEGRQVYPDVQPGYLRPLIPATAPQEPDTFEDIL 57

Query: 61  QDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENI 120
           QDV++ I+PG+THW SP +FAYFP  SS   ++ +ML      +G  W +SPA  ELE +
Sbjct: 58  QDVEKIIMPGVTHWHSPYFFAYFPTASSYPAMLADMLCGAIGCIGFSWAASPACTELETV 117

Query: 121 VMDWLGQMLDLPKSFLF--SGNGGGVIQGTTCEALLCTLTAARDRVLKKIGREN------ 172
           +MDWLG+ML LP++FL   +G GGGVIQG+  EA L  L AAR +V++++   +      
Sbjct: 118 MMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQG 177

Query: 173 --ISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEA 230
             + KLV Y+SDQ H + ++A  I G+    ++AI +     + + A ++   +  D  A
Sbjct: 178 AVLEKLVAYASDQAHSSVERAGLIGGV---KLKAIPSD--GKFAMRASALQEALERDKAA 232

Query: 231 ELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE 290
            LIP F+ AT+GTT+  + D L  +  +  +  IW+HVDAAYAGSA ICPEFRH ++GVE
Sbjct: 233 GLIPFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVE 292

Query: 291 CVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDW 350
             DSF+FNPHKWL    DC  +WVK  + L      +P YLK+             Y+ W
Sbjct: 293 FADSFNFNPHKWLLVNFDCSAMWVKRRTDLTGAFKLDPVYLKHSHQGS---GLITDYRHW 349

Query: 351 QITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLV 410
           Q+ L RRFRSLK+W V R +GV  L+ +IR HV ++  FE  V  D RFEV       LV
Sbjct: 350 QLPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQDPRFEVCAEVTLGLV 409

Query: 411 CFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGG 470
           CFR+  S                           +  N  LLE IN + K+ +    + G
Sbjct: 410 CFRLKGS---------------------------DGLNEALLERINSARKIHLVPCRLRG 442

Query: 471 IYVLRFAAGNSMTMESHVRAAWTVVQEHLE 500
            +VLRFA  +      HVR AW  ++    
Sbjct: 443 QFVLRFAICSRKVESGHVRLAWEHIRGLAA 472

>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} Length = 475

 Score =  594 bits (1534), Expect = 0.0
 Identities = 198/510 (38%), Positives = 281/510 (55%), Gaps = 51/510 (10%)

Query: 1   MDQAYAQEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETIL 60
           M+   A EF+      VDF+AEY +NI +  V  +V+PGYLK  +P++AP  PE  + ++
Sbjct: 1   ME---APEFKDFAKTMVDFIAEYLENIRERRVLPEVKPGYLKPLIPDAAPEKPEKWQDVM 57

Query: 61  QDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENI 120
           QD++  I+PG+THW SP + AYFP  +S   IV +MLS     +G  WI+SPA  ELE +
Sbjct: 58  QDIERVIMPGVTHWHSPKFHAYFPTANSYPAIVADMLSGAIACIGFTWIASPACTELEVV 117

Query: 121 VMDWLGQMLDLPKSFLFS--GNGGGVIQGTTCEALLCTLTAARDRVLKKIGREN------ 172
           +MDWLG+ML+LP  FL    G GGGVIQGT  E+ L  L  A+ + LK++   +      
Sbjct: 118 MMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEH 177

Query: 173 --ISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEA 230
             + KLV Y SDQ H + ++A  + G+  ++++      S ++ +   ++   I  DV  
Sbjct: 178 TILGKLVGYCSDQAHSSVERAGLLGGVKLRSVQ------SENHRMRGAALEKAIEQDVAE 231

Query: 231 ELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE 290
            LIP +   T+GTT   A D L     V  +  +W+HVDAAYAGSA ICPE+RH + G+E
Sbjct: 232 GLIPFYAVVTLGTTNSCAFDYLDECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIE 291

Query: 291 CVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDW 350
             DSF+FNPHKW+    DC  +W+KDPS +++  + +P YLK++     P      Y+ W
Sbjct: 292 SADSFNFNPHKWMLVNFDCSAMWLKDPSWVVNAFNVDPLYLKHDMQGSAP-----DYRHW 346

Query: 351 QITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLV 410
           QI L RRFR+LKLW V+R +GV NL+  IR H   AK F  L  +D RFE+A   N  LV
Sbjct: 347 QIPLGRRFRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVADSRFELAAEINMGLV 406

Query: 411 CFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGG 470
           CFR+  S                           NE N  LL+ IN  G + +  A +  
Sbjct: 407 CFRLKGS---------------------------NERNEALLKRINGRGHIHLVPAKIKD 439

Query: 471 IYVLRFAAGNSMTMESHVRAAWTVVQEHLE 500
           +Y LR A  +  T    +  +W  V    +
Sbjct: 440 VYFLRMAICSRFTQSEDMEYSWKEVSAAAD 469

>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens} Length = 481

 Score =  593 bits (1531), Expect = 0.0
 Identities = 185/512 (36%), Positives = 276/512 (53%), Gaps = 51/512 (9%)

Query: 1   MDQAYAQEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETIL 60
           M+    +E+R +G   VD++ +Y   + +  V   V+PGYL+ +LPESAP  P+S ++I 
Sbjct: 6   ME---PEEYRERGREMVDYICQYLSTVRERRVTPDVQPGYLRAQLPESAPEDPDSWDSIF 62

Query: 61  QDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENI 120
            D++  I+PG+ HWQSP+  AY+PA +S   ++G+ML+   N +G  W SSPA  ELE  
Sbjct: 63  GDIERIIMPGVVHWQSPHMHAYYPALTSWPSLLGDMLADAINCLGFTWASSPACTELEMN 122

Query: 121 VMDWLGQMLDLPKSFLF---SGNGGGVIQGTTCEALLCTLTAARDRVLKKIGREN----- 172
           VMDWL +ML LP+ FL    S  GGGV+Q T  E+ L  L AAR   + ++         
Sbjct: 123 VMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADE 182

Query: 173 ---ISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVE 229
               ++LV Y+SDQ H + +KA  I  +    ++ +      ++ L  E++   I  D +
Sbjct: 183 SSLNARLVAYASDQAHSSVEKAGLISLV---KMKFLPV--DDNFSLRGEALQKAIEEDKQ 237

Query: 230 AELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGV 289
             L+P+F+CAT+GTT + A D L  L  +  + G+W+H+DAAYAG+A +CPEFR F+ G+
Sbjct: 238 RGLVPVFVCATLGTTGVCAFDCLSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGI 297

Query: 290 ECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKD 349
           E  DSF+FNP KW+    DC   WVKD   L  T S NP YL++  +          +  
Sbjct: 298 EYADSFTFNPSKWMMVHFDCTGFWVKDKYKLQQTFSVNPIYLRHANSGVATD-----FMH 352

Query: 350 WQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSL 409
           WQI L RRFRS+KLW VIR+FGV NL+  +R    MAK FE LV +D  FE+   R+  L
Sbjct: 353 WQIPLSRRFRSVKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRNDPSFEIPAKRHLGL 412

Query: 410 VCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG 469
           V FR+                              N     +L+ I  +G++F+  A + 
Sbjct: 413 VVFRLKGP---------------------------NSLTENVLKEIAKAGRLFLIPATIQ 445

Query: 470 GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501
              ++RF   +  T    +   W ++++    
Sbjct: 446 DKLIIRFTVTSQFTTRDDILRDWNLIRDAATL 477

>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A* Length = 504

 Score =  563 bits (1452), Expect = 0.0
 Identities = 101/504 (20%), Positives = 199/504 (39%), Gaps = 34/504 (6%)

Query: 6   AQEFRRQGHMFVDFMAEYYKNIDK--YPVRSQVEPGYLKKRLPE---SAPYSPESVETIL 60
            ++  +     VD +  Y +        V     P  L + +          PES+E IL
Sbjct: 18  EEQTVQFLLEVVDILLNYVRKTFDRSTKVLDFHHPHQLLEGMEGFNLELSDHPESLEQIL 77

Query: 61  QDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENI 120
            D ++ +  G+     P +F        + G+ GE L+S  N     +  +P  V +E I
Sbjct: 78  VDCRDTLKYGVRTGH-PRFFNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQI 136

Query: 121 VMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKI---GRENISKLV 177
            +  + +++        S +G G+       + + ++ AAR +   ++   G   + KLV
Sbjct: 137 TLKKMREIVGWS-----SKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLV 191

Query: 178 VYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFL 237
           +++S+Q+H + +KA   +G    N+  IK        +      ++I    +   +P ++
Sbjct: 192 LFTSEQSHYSIKKAGAALGFGTDNVILIKCN--ERGKIIPADFEAKILEAKQKGYVPFYV 249

Query: 238 CATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSF 297
            AT GTT   A DP++ + D+ +++ +W+HVDAA+ G   +  + RH ++G+E  +S ++
Sbjct: 250 NATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTW 309

Query: 298 NPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRR 357
           NPHK +   L C  + VK+   L         YL          +      D  I   R 
Sbjct: 310 NPHKMMGVLLQCSAILVKEKGILQGCNQMCAGYLFQPDKQY---DVSYDTGDKAIQCGRH 366

Query: 358 FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAF--PRNFSLVCFRVT 415
               K W++ +  G     N I   + +A+     + + + FE+ F      + VCF   
Sbjct: 367 VDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFWYI 426

Query: 416 PSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHA-IVGGIYVL 474
           P ++     +                E+ ++   ++   +  SG   + +          
Sbjct: 427 PQSLRGVPDSP------------QRREKLHKVAPKIKALMMESGTTMVGYQPQGDKANFF 474

Query: 475 RFAAGNSMTMESHVRAAWTVVQEH 498
           R    N    +S +      ++  
Sbjct: 475 RMVISNPAATQSDIDFLIEEIERL 498

>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens} Length = 515

 Score =  556 bits (1435), Expect = 0.0
 Identities = 110/501 (21%), Positives = 197/501 (39%), Gaps = 31/501 (6%)

Query: 3   QAYAQEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQD 62
            A     R    + VD   +   ++ +       EP  LK+ L        ES + IL+ 
Sbjct: 37  VAVEALLRAVFGVVVDEAIQKGTSVSQKVC-EWKEPEELKQLLDLELRSQGESQKQILER 95

Query: 63  VQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVM 122
            +  I   +     P +F    +      + G +++   N     +  +P  V +E  V+
Sbjct: 96  CRAVIRYSVKTG-HPRFFNQLFSGLDPHALAGRIITESLNTSQYTYEIAPVFVLMEEEVL 154

Query: 123 DWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVL---KKIGRENISKLVVY 179
             L  ++          +G G+       + +  +  AR +     K+ G   +  L ++
Sbjct: 155 RKLRALVGWS-------SGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALF 207

Query: 180 SSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCA 239
           +S + H + QK A  +G+   ++R +K        +  E +  QI +      +P  + A
Sbjct: 208 TSKECHYSIQKGAAFLGLGTDSVRVVKAD--ERGKMVPEDLERQIGMAEAEGAVPFLVSA 265

Query: 240 TVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNP 299
           T GTT + A DPL+ + DV ++ G+W+HVDAA+ GS  +    RH +DG++  DS ++NP
Sbjct: 266 TSGTTVLGAFDPLEAIADVCQRHGLWLHVDAAWGGSVLLSQTHRHLLDGIQRADSVAWNP 325

Query: 300 HKWLFTTLDCCCLWVKDPSCLL-STLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRF 358
           HK L   L C  L ++D S LL     +   YL  +       +  +   D  +   RR 
Sbjct: 326 HKLLAAGLQCSALLLQDTSNLLKRCHGSQASYLFQQDKFY---DVALDTGDKVVQCGRRV 382

Query: 359 RSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSA 418
             LKLW++ +  G   L   I     +A+     +   + FE+     F  VCF   P +
Sbjct: 383 DCLKLWLMWKAQGDQGLERRIDQAFVLARYLVEEMKKREGFELVMEPEFVNVCFWFVPPS 442

Query: 419 VMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGG-IYVLRFA 477
           +  K  +                ER ++    L E +   G + + +   G      R  
Sbjct: 443 LRGKQESP------------DYHERLSKVAPVLKERMVKEGSMMIGYQPHGTRGNFFRVV 490

Query: 478 AGNSMTMESHVRAAWTVVQEH 498
             NS    + +      ++  
Sbjct: 491 VANSALTCADMDFLLNELERL 511

>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus} Length = 497

 Score =  554 bits (1430), Expect = 0.0
 Identities = 105/503 (20%), Positives = 187/503 (37%), Gaps = 51/503 (10%)

Query: 6   AQEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPE-SAPYSPESVETILQDVQ 64
           + EF          M   ++ ++     S ++P  L+  +           +++++ DV 
Sbjct: 31  SAEFASVMSHTTSAMKSVFEQVNA--PYSGMDPKALEDAINAVDLDNKNAPLKSVIDDVA 88

Query: 65  EHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDW 124
           E +       Q P+  A+      +  +  E + +  N     W  + +A  +E  V++W
Sbjct: 89  ELVAKNAIFTQHPDCIAHLHTPPLMPAVAAEAMIAALNQSMDSWDQASSATYVEQKVVNW 148

Query: 125 LGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENI---------SK 175
           L    DL +         G+      ++    L  ARD +  K+   +I          K
Sbjct: 149 LCDKYDLSEK------ADGIFTSGGTQSNQMGLMLARDWIADKLSGHSIQKLGLPDYADK 202

Query: 176 LVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPL 235
           L +  S ++H   QK+A  +G+  K +  +     +   +    +   I       LIP 
Sbjct: 203 LRIVCSKKSHFTVQKSASWMGLGEKAVMTVDAN--ADGTMDITKLDEVIAQAKAEGLIPF 260

Query: 236 FLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSF 295
            +  T GTT   A+D L  + D+A +  +W+HVD AY G A I    +  + GVE   S 
Sbjct: 261 AIVGTAGTTDHGAIDDLDFIADMAVKHDMWMHVDGAYGG-ALILSSHKSRLKGVERAHSI 319

Query: 296 SFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLC 355
           S + HK  + T+ C  L V D S     L  +  YL  E       ++     D  I   
Sbjct: 320 SVDFHKLFYQTISCGALLVNDKS-NFKFLLHHADYLNREH------DELPNLVDKSIATT 372

Query: 356 RRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVT 415
           +RF +LK+++ ++N G   L +     +        ++ ++ +FE+    + S V FR T
Sbjct: 373 KRFDALKVFMTMQNVGPKALGDMYDHLLAQTLEVADMIRTNDQFELLAEPSLSTVLFRAT 432

Query: 416 PSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLR 475
                                   E    +E N+ L       G   +   IV G   L+
Sbjct: 433 H-----------------------ETADLDELNKALRLEALTRGIAVLGETIVDGKTALK 469

Query: 476 FAAGNSMTMESHVRAAWTVVQEH 498
           F   N     S   +  + +   
Sbjct: 470 FTILNPCLTTSDFESLLSKINML 492

>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae} Length = 497

 Score =  161 bits (408), Expect = 6e-44
 Identities = 67/421 (15%), Positives = 136/421 (32%), Gaps = 50/421 (11%)

Query: 20  MAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQEHIVPGITHWQSPNY 79
           + +  ++I+   +RS  +     + LP +     + V   L  + +      T W+    
Sbjct: 14  VTKVKQSIEDELIRSDSQLMNFPQ-LPSNG-IPQDDVIEELNKLNDL--IPHTQWKEGKV 69

Query: 80  FAYFP-ATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFS 138
                     +  +             L     PA  ++E+ V+  + +M + P      
Sbjct: 70  SGAVYHGGDDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEVVSMVLRMFNAPSD---- 125

Query: 139 GNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGID 198
              G    G T E+LL    +A+   L   G   I++  + +    H  F KAA   G+ 
Sbjct: 126 TGCGTTTSGGT-ESLLLACLSAKMYALHHRG---ITEPEIIAPVTAHAGFDKAAYYFGMK 181

Query: 199 RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDV 258
              +R ++   ++ Y +    V   IN +       + L  +         D ++ L  +
Sbjct: 182 ---LRHVELDPTT-YQVDLGKVKKFINKN------TVLLVGSAPNFPHGIADDIEGLGKI 231

Query: 259 AKQFGIWVHVDAAYAG------SACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCL 312
           A+++ + +HVD+                        V  V S S + HK+ F       +
Sbjct: 232 AQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVPGVTSISCDTHKYGFAPKGSSVI 291

Query: 313 WVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLC---RRFRSLKLWVVIRN 369
             ++    +     NP +               G      TL         +  W  + N
Sbjct: 292 MYRNSDLRMHQYYVNPAWT--------------GGLYGSPTLAGSRPGAIVVGCWATMVN 337

Query: 370 FGVANLRNFIRSHVGMAK-LFERLVTSDKRFEVAFPRNFSLVCFR---VTPSAVMDKLRT 425
            G        +  VG A    + +  +    ++     +S++ F    +    + D+L  
Sbjct: 338 MGENGYIESCQEIVGAAMKFKKYIQENIPDLDIMGNPRYSVISFSSKTLNIHELSDRLSK 397

Query: 426 K 426
           K
Sbjct: 398 K 398

>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A* Length = 514

 Score =  155 bits (393), Expect = 1e-41
 Identities = 68/431 (15%), Positives = 124/431 (28%), Gaps = 51/431 (11%)

Query: 9   FRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQEHIV 68
            + Q     D   ++  ++       +        RLP +          IL ++     
Sbjct: 36  IQSQPPARRDPTMDWLASLRSQIKPYRDRFPS-HARLPRA----GLPRAEILAEIAAMGA 90

Query: 69  PGITHWQSPNYFAY-FPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQ 127
                W+        +         + E+ +       L     P+  + E  V+     
Sbjct: 91  AESPAWRDGYASGAVYHGDEHHIAFLNEVYALQSQSNPLHPDLWPSTAKFEAEVVAMTAH 150

Query: 128 MLDLPKSFLFSGNGGGVI-QGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHC 186
           ML    +    G   G +  G T E+LL  +   RD      G   I+          H 
Sbjct: 151 MLGGDAA---GGTVCGTVTSGGT-ESLLLAMKTYRDWARATKG---ITAPEAVVPVSAHA 203

Query: 187 AFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAI 246
           AF KAAQ  GI    +          Y     ++   I  +       + +  +      
Sbjct: 204 AFDKAAQYFGIK---LVRTPLDAD--YRADVAAMREAITPN------TVVVAGSAPGYPH 252

Query: 247 TAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPE-----FRHFIDGVECVDSFSFNPHK 301
             VDP+  +  +A + GI  HVDA   G      E        F   +E V S S + HK
Sbjct: 253 GVVDPIPEIAALAAEHGIGCHVDACLGGFILPWAERLGYPVPPFDFRLEGVTSVSADTHK 312

Query: 302 WLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLC---RRF 358
           + +       +  + P  L         +               G   +  T        
Sbjct: 313 YGYGAKGTSVILYRRPDLLHYQYFIAADWP--------------GGLYFSPTFAGSRPGA 358

Query: 359 RSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFR---VT 415
            S   W  + + G     +  R  +  A   +  V +    ++       ++      + 
Sbjct: 359 LSATAWAAMLSLGEEGYLDATRRILQAADRLKAGVRAIPSLKILGDP-LWVIAVASDELN 417

Query: 416 PSAVMDKLRTK 426
              VM+++  +
Sbjct: 418 IYQVMEEMAGR 428

>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9 Length = 456

 Score =  138 bits (348), Expect = 6e-36
 Identities = 43/394 (10%), Positives = 108/394 (27%), Gaps = 75/394 (19%)

Query: 42  KKRLPESAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEM----- 96
            +++PE+     E ++  L+ +            +             A    ++     
Sbjct: 55  HRKIPEN-GIDDEKIKLFLKFLSMM--------DTDKDPKSVRIGEREARTYSKIHEELS 105

Query: 97  --------LSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGT 148
                    S            +  A  +  +    L                      +
Sbjct: 106 SGFCHGIGRSGNLVDPQPK---ASGASIMYALTNKILESFFKQLGLN----VHAIATPIS 158

Query: 149 TCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTT 208
           T  ++   L+AAR +             VV     +H +  KA   VG++ + +  +   
Sbjct: 159 TGMSISLCLSAARKKYGSN---------VVIYPYASHKSPIKAVSFVGMNMRLVETVLDG 209

Query: 209 KSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHV 268
                 +  E + + I  ++E    P  + +T+        D +  +  + + + I   +
Sbjct: 210 DR--VYVPVEDIENAIKKEIELGNRPC-VLSTLTFFPPRNSDDIVEIAKICENYDIPHII 266

Query: 269 DAAYAGSACICPEFRHFIDGV--ECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLST 326
           + AYA        +   +       VD+   +  K L T +    ++  D   +     +
Sbjct: 267 NGAYA---IQNNYYLEKLKKAFKYRVDAVVSSSDKNLLTPIGGGLVYSTDAEFIKEISLS 323

Query: 327 NPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMA 386
            P                                +   V + + G  N    +++     
Sbjct: 324 YP------------------------GRASATPVVNTLVSLLSMGSKNYLELVKNQKNSK 359

Query: 387 KLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVM 420
           KL + L+      +++       +      ++ +
Sbjct: 360 KLLDELLN-----DLSKKTGGKFLDVESPIASCI 388

>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii} Length = 397

 Score =  130 bits (328), Expect = 1e-33
 Identities = 71/399 (17%), Positives = 136/399 (34%), Gaps = 58/399 (14%)

Query: 43  KRLPESAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFN 102
           + + E       S + IL++++++       ++  N F      S+V  I  +++     
Sbjct: 3   RNMQEK----GVSEKEILEELKKYRSLD-LKYEDGNIFGSM--CSNVLPITRKIVDIFLE 55

Query: 103 VVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARD 162
               D         LE   +  LG +L+   ++    +GG      T EA L  L   ++
Sbjct: 56  TNLGDPGLFKGTKLLEEKAVALLGSLLNNKDAYGHIVSGG------T-EANLMALRCIKN 108

Query: 163 RVLKK--IGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESV 220
              +K   G        +      H +F+K  +++ ++          +   Y +  + V
Sbjct: 109 IWREKRRKGLSKNEHPKIIVPITAHFSFEKGREMMDLE---YIYAPIKED--YTIDEKFV 163

Query: 221 LSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAG------ 274
              +      +     +    GTT +  +D ++ L  +AK+  I++HVDAA+ G      
Sbjct: 164 KDAVE-----DYDVDGIIGIAGTTELGTIDNIEELSKIAKENNIYIHVDAAFGGLVIPFL 218

Query: 275 -----SACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQ 329
                   +  +F  F  G   VDS + +PHK     +    +  KD       L  +  
Sbjct: 219 DDKYKKKGVNYKFD-FSLG---VDSITIDPHKMGHCPIPSGGILFKDIG-YKRYLDVDAP 273

Query: 330 YLKNEATDQEPKEQEVGYKDWQITLCR-RFRSLKLWVVIRNFGVANLRNFIRSHVGMAKL 388
           YL                +   I   R  F     + V+R  G    R  +   +     
Sbjct: 274 YLT-------------ETRQATILGTRVGFGGACTYAVLRYLGREGQRKIVNECMENTLY 320

Query: 389 FERLVTSDKRFEVAFPRNFSLVCFRVT-PSAVMDKLRTK 426
             + +  +    V  P   ++V         V  KLR +
Sbjct: 321 LYKKLKENNFKPVIEP-ILNIVAIEDEDYKEVCKKLRDR 358

>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana} Length = 502

 Score =  130 bits (327), Expect = 6e-33
 Identities = 63/404 (15%), Positives = 141/404 (34%), Gaps = 53/404 (13%)

Query: 42  KKRLPESAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGF 101
           + ++PE+     E+   I+ D          + +  N  ++   T+ +     +++ S  
Sbjct: 29  RFKMPEN-SIPKEAAYQIINDELMLDG----NPRL-NLASF--VTTWMEPECDKLIMSSI 80

Query: 102 NVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAAR 161
           N   +D    P   EL+N  ++ +  + + P     +  G G +  +  EA++    A +
Sbjct: 81  NKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSS--EAIMLAGLAFK 138

Query: 162 DRVLKKIGRE--NISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAES 219
            +   K   E   + K  + +       ++K A+   ++   ++ +K ++   Y +  + 
Sbjct: 139 RKWQNKRKAEGKPVDKPNIVTGANVQVCWEKFARYFEVE---LKEVKLSE-GYYVMDPQQ 194

Query: 220 VLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFG------IWVHVDAAYA 273
            +  ++ +       + + A +G+T     + +K L D+  +          +HVDAA  
Sbjct: 195 AVDMVDEN------TICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASG 248

Query: 274 GSACICPEFRHFID-GVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLK 332
           G            D  +  V S + + HK+         +  ++   L   L  +  YL 
Sbjct: 249 GFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYL- 307

Query: 333 NEATDQEPKEQEVGYKDWQITLC--RR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLF 389
                        G      TL   +   + +  +  +   G    RN + +      + 
Sbjct: 308 -------------GADQPTFTLNFSKGSSQVIAQYYQLIRLGHEGYRNVMENCRENMIVL 354

Query: 390 ERLVTSDKRFEVAF-PRNFSLVCFRVTPS------AVMDKLRTK 426
              +   +RF +        LV F +  S       + D LR  
Sbjct: 355 REGLEKTERFNIVSKDEGVPLVAFSLKDSSCHTEFEISDMLRRY 398

>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A* Length = 452

 Score =  101 bits (253), Expect = 2e-23
 Identities = 53/346 (15%), Positives = 105/346 (30%), Gaps = 53/346 (15%)

Query: 106 LDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVL 165
           +D    P +  ++   ++ +  +   P        G   I  +  EA +    A + R  
Sbjct: 71  IDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSS--EACMLGGMAMKWRWR 128

Query: 166 KK---IGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLS 222
           K+    G+      +V         + K A+   ++   +R I         +  + ++ 
Sbjct: 129 KRMEAAGKPTDKPNLVCGP--VQICWHKFARYWDVE---LREIPMRPGQ-LFMDPKRMIE 182

Query: 223 QINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF------GIWVHVDAAYAGSA 276
             + +       + +  T G T     +  +PL D   +F       I +H+DAA  G  
Sbjct: 183 ACDEN------TIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFL 236

Query: 277 CICPEFRHFID-GVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEA 335
                     D  +  V S S + HK+    L C  +  +D   L   L  N  YL    
Sbjct: 237 APFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYL---- 292

Query: 336 TDQEPKEQEVGYKDWQITLC--RR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERL 392
                     G +     +   R   + +  +      G         +   +A      
Sbjct: 293 ----------GGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADE 342

Query: 393 VTSDKRFEVAFPRNFS----LVCFRVTPS--------AVMDKLRTK 426
           +     +E             VCF++            + ++LR +
Sbjct: 343 IAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLR 388

>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A* Length = 450

 Score = 52.0 bits (124), Expect = 3e-07
 Identities = 28/210 (13%), Positives = 66/210 (31%), Gaps = 17/210 (8%)

Query: 111 SPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGR 170
           S    ++ N ++  + ++  +            V+   T  +L       R        +
Sbjct: 93  SSLLNKITNSLVLNVIKLAGVHSV-----ASCFVVPMATGMSLTLCFLTLR-------HK 140

Query: 171 ENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEA 230
              +K +++       +  K+    G +   I  +   +        ++V ++I  ++  
Sbjct: 141 RPKAKYIIWPR-IDQKSCFKSMVTAGFEPVVIENV--LEGDELRTDLKAVEAKIQ-ELGP 196

Query: 231 ELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE 290
           E I      T    A    D L+ L  +   + I   V+ AY   +  C         V 
Sbjct: 197 EHILCLHS-TTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQGARVG 255

Query: 291 CVDSFSFNPHKWLFTTLDCCCLWVKDPSCL 320
            +D+F  +  K     +    +   +   +
Sbjct: 256 RIDAFVQSLDKNFMVPVGGAIIAGFNEPFI 285

>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens} Length = 501

 Score = 49.3 bits (117), Expect = 2e-06
 Identities = 28/210 (13%), Positives = 69/210 (32%), Gaps = 17/210 (8%)

Query: 111 SPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGR 170
           S    ++ N ++  + ++  +            V+   T  +L       R +      R
Sbjct: 111 SSLLNKITNSLVLDIIKLAGVHTV-----ANCFVVPMATGMSLTLCFLTLRHK------R 159

Query: 171 ENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEA 230
              +K +++       +  K+    G +   I  +   +        ++V +++  ++  
Sbjct: 160 PK-AKYIIWP-RIDQKSCFKSMITAGFEPVVIENV--LEGDELRTDLKAVEAKVQ-ELGP 214

Query: 231 ELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE 290
           + I     +T    A    D L+ L  +   + I   V+ AY   +  C         V 
Sbjct: 215 DCILCIH-STTSCFAPRVPDRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVG 273

Query: 291 CVDSFSFNPHKWLFTTLDCCCLWVKDPSCL 320
            +D+F  +  K     +    +   + S +
Sbjct: 274 RIDAFVQSLDKNFMVPVGGAIIAGFNDSFI 303

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 47.2 bits (111), Expect = 1e-05
 Identities = 64/458 (13%), Positives = 130/458 (28%), Gaps = 157/458 (34%)

Query: 52  SPESVETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISS 111
           SPE+V  +LQ +   I P  T  +S +         S+   +  +L S      L     
Sbjct: 194 SPETVLEMLQKLLYQIDPNWTS-RSDHSSNIKLRIHSIQAELRRLLKSKPYENCL----- 247

Query: 112 PAAVELENIVMD--WLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG 169
                   +V+      +  +   +F  S           C+ LL T    R + +    
Sbjct: 248 --------LVLLNVQNAKAWN---AFNLS-----------CKILLTT----RFKQV---- 277

Query: 170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLS---AESVLSQINL 226
                                   +      +I     +      L+    +S+L +  L
Sbjct: 278 ---------------------TDFLSAATTTHISLDHHSM----TLTPDEVKSLLLKY-L 311

Query: 227 DVEAELIPLFLCATVGTTAITAVDPL------KPLCDVAKQFGIWVHVDAAYAGSACICP 280
           D   + +P  +            +P       + + D    +  W HV+         C 
Sbjct: 312 DCRPQDLPREVL---------TTNPRRLSIIAESIRDGLATWDNWKHVN---------CD 353

Query: 281 EFRHFIDGVECVDSFSFNPHKWLFTTL-----DCCCLWVKDPSCLLSTL-----STNPQY 330
           +    I+    ++      ++ +F  L              P+ LLS +      ++   
Sbjct: 354 KLTTIIE--SSLNVLEPAEYRKMFDRLSVFPPS-----AHIPTILLSLIWFDVIKSDVMV 406

Query: 331 LKNE-----ATDQEPKEQEVGYKDWQITLC----------RRF-------RSLKLWVVIR 368
           + N+       +++PKE  +      + L           R         ++        
Sbjct: 407 VVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSD---- 462

Query: 369 NFGVANLRNFIRSHVG----------MAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSA 418
           +     L  +  SH+G             LF  +   D RF     R+ S         +
Sbjct: 463 DLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFL-DFRFLEQKIRHDSTAW--NASGS 519

Query: 419 VMDKLRTKYKNGTYDQYRQF-SEEERTNEFNRELLESI 455
           +++ L           Y+ +  + +   E    L+ +I
Sbjct: 520 ILNTL------QQLKFYKPYICDNDPKYE---RLVNAI 548

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	502
4e1o_A	481	HDC, histidine decarboxylase; lyase; HET: PLP PVH;	100.0
3k40_A	475	Aromatic-L-amino-acid decarboxylase; PLP dependent	100.0
1js3_A	486	DDC;, DOPA decarboxylase; carbidopa, parkinson'S d	100.0
3vp6_A	511	Glutamate decarboxylase 1; catalytic loop SWAP, ly	100.0
2okj_A	504	Glutamate decarboxylase 1; PLP-dependent decarboxy	100.0
2jis_A	515	Cysteine sulfinic acid decarboxylase; pyridoxal ph	100.0
2qma_A	497	Diaminobutyrate-pyruvate transaminase and L-2,4- d	100.0
2dgk_A	452	GAD-beta, GADB, glutamate decarboxylase beta; gadb	100.0
3hbx_A	502	GAD 1, glutamate decarboxylase 1; calmodulin-bindi	100.0
3mc6_A	497	Sphingosine-1-phosphate lyase; carboxy-lyase activ	100.0
3mad_A	514	Sphingosine-1-phosphate lyase; carboxy-lyase activ	100.0
3bc8_A	450	O-phosphoseryl-tRNA(SEC) selenium transferase; dis	100.0
3f9t_A	397	TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L	100.0
2z67_A	456	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	100.0
1wyu_B	474	Glycine dehydrogenase subunit 2 (P-protein); alpha	100.0
3nnk_A	411	Ureidoglycine-glyoxylate aminotransferase; PLP-dep	99.97
3isl_A	416	Purine catabolism protein PUCG; pyridoxalphosphate	99.97
1wyu_A	438	Glycine dehydrogenase (decarboxylating) subunit 1;	99.96
4hvk_A	382	Probable cysteine desulfurase 2; transferase and I	99.96
3kgw_A	393	Alanine-glyoxylate aminotransferase; AAH25799.1, p	99.96
2dr1_A	386	PH1308 protein, 386AA long hypothetical serine ami	99.96
2huf_A	393	Alanine glyoxylate aminotransferase; alpha and bet	99.96
4eb5_A	382	Probable cysteine desulfurase 2; scaffold, transfe	99.96
2z9v_A	392	Aspartate aminotransferase; pyridoxamine, pyruvate	99.96
2yrr_A	353	Aminotransferase, class V; structural genomics, NP	99.96
3hl2_A	501	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	99.96
1vjo_A	393	Alanine--glyoxylate aminotransferase; 17130350, AL	99.96
3zrp_A	384	Serine-pyruvate aminotransferase (AGXT); HET: PLP;	99.96
3e9k_A	465	Kynureninase; kynurenine-L-hydrolase, kynurenine h	99.96
3lvm_A	423	Cysteine desulfurase; structural genomics, montrea	99.96
3ffr_A	362	Phosphoserine aminotransferase SERC; structural ge	99.95
1iug_A	352	Putative aspartate aminotransferase; wild type, py	99.95
1t3i_A	420	Probable cysteine desulfurase; PLP-binding enzyme,	99.95
2ch1_A	396	3-hydroxykynurenine transaminase; PLP-enzyme, kynu	99.95
3f0h_A	376	Aminotransferase; RER070207000802, structural geno	99.95
1eg5_A	384	Aminotransferase; PLP-dependent enzymes, iron-sulf	99.95
1kmj_A	406	Selenocysteine lyase; persulfide perselenide NIFS	99.95
3vax_A	400	Putative uncharacterized protein DNDA; desulfurase	99.95
1m32_A	366	2-aminoethylphosphonate-pyruvate aminotransferase;	99.95
3dzz_A	391	Putative pyridoxal 5'-phosphate-dependent C-S LYA;	99.94
2bkw_A	385	Alanine-glyoxylate aminotransferase 1; analine-gly	99.94
3cai_A	406	Possible aminotransferase; RV3778C; 1.80A {Mycobac	99.94
1elu_A	390	L-cysteine/L-cystine C-S lyase; FES cluster biosyn	99.94
1svv_A	359	Threonine aldolase; structural genomics, structura	99.94
2e7j_A	371	SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-st	99.94
1v72_A	356	Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2	99.94
1j32_A	388	Aspartate aminotransferase; HET: PLP; 2.10A {Phorm	99.94
2w8t_A	427	SPT, serine palmitoyltransferase; HET: LLP; 1.25A	99.94
1xi9_A	406	Putative transaminase; alanine aminotransferase, s	99.93
1qz9_A	416	Kynureninase; kynurenine, tryptophan, PLP, vitamin	99.93
2gb3_A	409	Aspartate aminotransferase; TM1698, structural gen	99.93
4dq6_A	391	Putative pyridoxal phosphate-dependent transferas;	99.93
1gd9_A	389	Aspartate aminotransferase; pyridoxal enzyme, temp	99.93
3e77_A	377	Phosphoserine aminotransferase; SERC, PLP, structu	99.93
1o4s_A	389	Aspartate aminotransferase; TM1255, structural gen	99.93
3tqx_A	399	2-amino-3-ketobutyrate coenzyme A ligase; energy m	99.93
3l8a_A	421	METC, putative aminotransferase, probable beta-cys	99.93
3nra_A	407	Aspartate aminotransferase; structural genomics, j	99.93
1c7n_A	399	Cystalysin; transferase, aminotransferase, pyridox	99.93
3ke3_A	379	Putative serine-pyruvate aminotransferase; structu	99.92
3m5u_A	361	Phosphoserine aminotransferase; alpha-beta half sa	99.92
3dyd_A	427	Tyrosine aminotransferase; PLP, SGC, structural ge	99.92
3kax_A	383	Aminotransferase, classes I and II; PLP, C-S lyase	99.92
1d2f_A	390	MALY protein; aminotransferase fold, large PLP-bin	99.92
1fc4_A	401	2-amino-3-ketobutyrate conenzyme A ligase; 2-amino	99.92
3piu_A	435	1-aminocyclopropane-1-carboxylate synthase; fruit	99.92
1u08_A	386	Hypothetical aminotransferase YBDL; alpha beta pro	99.92
3a9z_A	432	Selenocysteine lyase; PLP, cytoplasm, pyridoxal ph	99.92
1iay_A	428	ACC synthase 2, 1-aminocyclopropane-1-carboxylate	99.92
2zc0_A	407	Alanine glyoxylate transaminase; alanine:glyoxylat	99.92
3a2b_A	398	Serine palmitoyltransferase; vitamin B6-dependent	99.92
3g0t_A	437	Putative aminotransferase; NP_905498.1, putative a	99.92
1b9h_A	388	AHBA synthase, protein (3-amino-5-hydroxybenzoic a	99.92
3h14_A	391	Aminotransferase, classes I and II; YP_167802.1, S	99.92
2o0r_A	411	RV0858C (N-succinyldiaminopimelate aminotransfera;	99.91
3op7_A	375	Aminotransferase class I and II; PLP-dependent tra	99.91
1yiz_A	429	Kynurenine aminotransferase; glutamine transaminas	99.91
3cq5_A	369	Histidinol-phosphate aminotransferase; PLP, PMP, a	99.91
2fnu_A	375	Aminotransferase; protein-product complex, structu	99.91
1rv3_A	483	Serine hydroxymethyltransferase, cytosolic; one-ca	99.91
3ffh_A	363	Histidinol-phosphate aminotransferase; APC88260, l	99.91
3kki_A	409	CAI-1 autoinducer synthase; quorum sensing, CQSA,	99.91
3ly1_A	354	Putative histidinol-phosphate aminotransferase; st	99.91
1b5p_A	385	Protein (aspartate aminotransferase); pyridoxal en	99.91
3qm2_A	386	Phosphoserine aminotransferase; structural genomic	99.91
3tcm_A	500	Alanine aminotransferase 2; pyridoxal phosphate (P	99.91
3aow_A	448	Putative uncharacterized protein PH0207; protein-P	99.91
3fdb_A	377	Beta C-S lyase, putative PLP-dependent beta-cystat	99.91
2z61_A	370	Probable aspartate aminotransferase 2; amino acid	99.91
1bw0_A	416	TAT, protein (tyrosine aminotransferase); tyrosine	99.91
1v2d_A	381	Glutamine aminotransferase; PLP, riken structural	99.91
3euc_A	367	Histidinol-phosphate aminotransferase 2; YP_297314	99.91
1vp4_A	425	Aminotransferase, putative; structural genomics, j	99.91
2dkj_A	407	Serine hydroxymethyltransferase; PLP dependent enz	99.91
3ele_A	398	Amino transferase; RER070207001803, structural gen	99.91
2vyc_A	755	Biodegradative arginine decarboxylase; pyridoxal p	99.91
2x5d_A	412	Probable aminotransferase; HET: LLP PLP; 2.25A {Ps	99.91
3uwc_A	374	Nucleotide-sugar aminotransferase; lipopolysacchar	99.91
3get_A	365	Histidinol-phosphate aminotransferase; NP_281508.1	99.91
2c81_A	418	Glutamine-2-deoxy-scyllo-inosose aminotransferase;	99.9
2fyf_A	398	PSAT, phosphoserine aminotransferase; PLP-dependen	99.9
3frk_A	373	QDTB; aminotransferase, sugar-modification, natura	99.9
3dr4_A	391	Putative perosamine synthetase; deoxysugar, pyrido	99.9
2x3l_A	446	ORN/Lys/Arg decarboxylase family protein; lyase; H	99.9
2zyj_A	397	Alpha-aminodipate aminotransferase; alpha-aminoadi	99.9
1bs0_A	384	Protein (8-amino-7-oxonanoate synthase); PLP-depen	99.9
2o1b_A	404	Aminotransferase, class I; aminotrasferase; HET: P	99.9
2bwn_A	401	5-aminolevulinate synthase; tetrapyrrole biosynthe	99.9
2dou_A	376	Probable N-succinyldiaminopimelate aminotransfera;	99.9
3b46_A	447	Aminotransferase BNA3; kynurenine aminotransferase	99.9
3ftb_A	361	Histidinol-phosphate aminotransferase; structural	99.9
3fvs_A	422	Kynurenine--oxoglutarate transaminase 1; alpha bet	99.9
2c0r_A	362	PSAT, phosphoserine aminotransferase; pyridoxal-5'	99.89
2oga_A	399	Transaminase; PLP-dependent enzyme, desosamine, de	99.89
2vi8_A	405	Serine hydroxymethyltransferase; SHMT, E53Q, FTHF,	99.89
2a7v_A	490	Serine hydroxymethyltransferase; structural genomi	99.89
2cb1_A	412	O-acetyl homoserine sulfhydrylase; PLP enzyme, lya	99.89
1c4k_A	730	Protein (ornithine decarboxylase); lyase; HET: PLP	99.89
3ihj_A	498	Alanine aminotransferase 2; helix, structural geno	99.89
3lws_A	357	Aromatic amino acid beta-eliminating lyase/threoni	99.89
3ezs_A	376	Aminotransferase ASPB; NP_207418.1, structural gen	99.89
1mdo_A	393	ARNB aminotransferase; type 1 aminotransferase fol	99.88
1lc5_A	364	COBD, L-threonine-O-3-phosphate decarboxylase; PLP	99.88
3n0l_A	417	Serine hydroxymethyltransferase; alpha beta class,	99.88
1o69_A	394	Aminotransferase; structural genomics, unknown fun	99.88
1w23_A	360	Phosphoserine aminotransferase; pyridoxal-5'-phosp	99.88
2rfv_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate, PL	99.88
3jtx_A	396	Aminotransferase; NP_283882.1, structural genomics	99.88
1fg7_A	356	Histidinol phosphate aminotransferase; HISC, histi	99.88
3gbx_A	420	Serine hydroxymethyltransferase; structural genomi	99.88
3hdo_A	360	Histidinol-phosphate aminotransferase; PSI-II, his	99.88
2x5f_A	430	Aspartate_tyrosine_phenylalanine pyridoxal-5' phos	99.88
1gc0_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate; HE	99.88
1jg8_A	347	L-ALLO-threonine aldolase; glycine biosynthesis, p	99.87
3rq1_A	418	Aminotransferase class I and II; structural genomi	99.87
2po3_A	424	4-dehydrase; external aldimine, PLP, aminotransfer	99.87
3qhx_A	392	Cystathionine gamma-synthase METB (CGS); structura	99.87
3e2y_A	410	Kynurenine-oxoglutarate transaminase 3; alpha beta	99.87
1e5e_A	404	MGL, methionine gamma-lyase; methionine biosynthes	99.87
3fsl_A	397	Aromatic-amino-acid aminotransferase; tyrosine ami	99.87
3p1t_A	337	Putative histidinol-phosphate aminotransferase; PL	99.87
3b8x_A	390	WBDK, pyridoxamine 5-phosphate-dependent dehydrase	99.87
3qgu_A	449	LL-diaminopimelate aminotransferase; L-lysine, pyr	99.87
1qgn_A	445	Protein (cystathionine gamma-synthase); methionine	99.87
3pj0_A	359	LMO0305 protein; structural genomics, joint center	99.87
3ecd_A	425	Serine hydroxymethyltransferase 2; ssgcid, decode,	99.86
1ax4_A	467	Tryptophanase; tryptophan biosynthesis, tryptophan	99.86
2ez2_A	456	Beta-tyrosinase, tyrosine phenol-lyase; PLP-depend	99.86
3nyt_A	367	Aminotransferase WBPE; PLP binding, nucleotide-sug	99.86
1cs1_A	386	CGS, protein (cystathionine gamma-synthase); lyase	99.86
2r2n_A	425	Kynurenine/alpha-aminoadipate aminotransferase mit	99.86
3b1d_A	392	Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococ	99.77
3t18_A	413	Aminotransferase class I and II; PSI-biology, MCSG	99.86
3ju7_A	377	Putative PLP-dependent aminotransferase; NP_978343	99.86
2oqx_A	467	Tryptophanase; lyase, pyridoxal phosphate, tryptop	99.86
3ri6_A	430	O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate	99.85
4f4e_A	420	Aromatic-amino-acid aminotransferase; ssgcid, stru	99.85
1vef_A	395	Acetylornithine/acetyl-lysine aminotransferase; PL	99.85
3if2_A	444	Aminotransferase; YP_265399.1, structura genomics,	99.85
3ei9_A	432	LL-diaminopimelate aminotransferase; lysine biosyn	99.85
2ctz_A	421	O-acetyl-L-homoserine sulfhydrylase; crystal, O-ac	99.85
1pff_A	331	Methionine gamma-lyase; homocysteine; 2.50A {Trich	99.85
3h7f_A	447	Serine hydroxymethyltransferase 1; cytoplasm, one-	99.85
3ndn_A	414	O-succinylhomoserine sulfhydrylase; seattle struct	99.84
7aat_A	401	Aspartate aminotransferase; transferase(aminotrans	99.84
3acz_A	389	Methionine gamma-lyase; L-methionine; HET: LLP; 1.	99.84
1ajs_A	412	Aspartate aminotransferase; PIG, in the presence o	99.84
3ruy_A	392	Ornithine aminotransferase; structural genomics, c	99.83
1yaa_A	412	Aspartate aminotransferase; HET: PLP; 2.05A {Sacch	99.83
3bb8_A	437	CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartat	99.83
3fkd_A	350	L-threonine-O-3-phosphate decarboxylase; structura	99.83
2fq6_A	415	Cystathionine beta-lyase; protein-inhibitor comple	99.83
2ord_A	397	Acoat, acetylornithine aminotransferase; TM1785, a	99.82
3g7q_A	417	Valine-pyruvate aminotransferase; NP_462565.1, str	99.82
3meb_A	448	Aspartate aminotransferase; pyridoxal PHOS transfe	99.82
1sff_A	426	4-aminobutyrate aminotransferase; enzyme complexes	99.82
2eh6_A	375	Acoat, acetylornithine aminotransferase; ARGD, str	99.82
1n8p_A	393	Cystathionine gamma-lyase; three open alpha/beta s	99.82
3ez1_A	423	Aminotransferase MOCR family; YP_604413.1, struct	99.82
3asa_A	400	LL-diaminopimelate aminotransferase; PLP dependent	99.82
3ppl_A	427	Aspartate aminotransferase; dimer, PLP-dependent t	99.82
2ay1_A	394	Aroat, aromatic amino acid aminotransferase; HET:	99.81
1ibj_A	464	CBL, cystathionine beta-lyase; PLP-dependent enzym	99.81
3cog_A	403	Cystathionine gamma-lyase; CTH, PLP, propargylglyc	99.81
2q7w_A	396	Aspartate aminotransferase; mechanism-based inhibi	99.81
3nx3_A	395	Acoat, acetylornithine aminotransferase; csgid, st	99.81
3dxv_A	439	Alpha-amino-epsilon-caprolactam racemase; fold-TYP	99.81
3n75_A	715	LDC, lysine decarboxylase, inducible; pyridoxal-5'	99.8
3f6t_A	533	Aspartate aminotransferase; YP_194538.1, STRU geno	99.8
1uu1_A	335	Histidinol-phosphate aminotransferase; histidine b	99.8
3d6k_A	422	Putative aminotransferase; APC82464, corynebacteri	99.8
4adb_A	406	Succinylornithine transaminase; transferase, PLP e	99.8
2eo5_A	419	419AA long hypothetical aminotransferase; PLP enzy	99.8
2aeu_A	374	Hypothetical protein MJ0158; selenocysteine syntha	99.79
2pb2_A	420	Acetylornithine/succinyldiaminopimelate aminotran;	99.79
1s0a_A	429	Adenosylmethionine-8-amino-7-oxononanoate aminotra	99.79
4eu1_A	409	Mitochondrial aspartate aminotransferase; ssgcid,	99.79
1z7d_A	433	Ornithine aminotransferase; structural genomics co	99.79
3nmy_A	400	Xometc, cystathionine gamma-lyase-like protein; Cy	99.79
3i16_A	427	Aluminum resistance protein; YP_878183.1, carbon-s	99.78
3i4j_A	430	Aminotransferase, class III; structural GENOMICS,N	99.78
3jzl_A	409	Putative cystathionine beta-lyase involved in ALU	99.78
3a8u_X	449	Omega-amino acid--pyruvate aminotransferase; large	99.77
2oat_A	439	Ornithine aminotransferase; 5-fluoromethylornithin	99.77
1zod_A	433	DGD, 2,2-dialkylglycine decarboxylase; pyridoxal,	99.77
3n5m_A	452	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	99.76
3hvy_A	427	Cystathionine beta-lyase family protein, YNBB B.S	99.75
3tfu_A	457	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	99.75
3oks_A	451	4-aminobutyrate transaminase; ssgcid, transferase,	99.75
4a6r_A	459	Omega transaminase; transferase, PLP-binding enzym	99.75
3hmu_A	472	Aminotransferase, class III; structural genomics,	99.74
3i5t_A	476	Aminotransferase; pyridoxal 5'-phosphate, PSI-2, N	99.74
3gju_A	460	Putative aminotransferase; pyridoxal phosphate, PL	99.74
3k28_A	429	Glutamate-1-semialdehyde 2,1-aminomutase 2; biosyn	99.74
3dod_A	448	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	99.74
3ht4_A	431	Aluminum resistance protein; lyase, putative cysta	99.73
4ffc_A	453	4-aminobutyrate aminotransferase (GABT); structura	99.73
3l44_A	434	Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha	99.73
2cjg_A	449	L-lysine-epsilon aminotransferase; internal aldimi	99.73
3fq8_A	427	Glutamate-1-semialdehyde 2,1-aminomutase; drug res	99.71
2cy8_A	453	D-phgat, D-phenylglycine aminotransferase; structu	99.71
4e77_A	429	Glutamate-1-semialdehyde 2,1-aminomutase; structur	99.71
3k7y_A	405	Aspartate aminotransferase; aminotrans pyridoxal p	99.71
1ohv_A	472	4-aminobutyrate aminotransferase; PLP-dependent en	99.7
2epj_A	434	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	99.69
3bwn_A	391	AT1G70560, L-tryptophan aminotransferase; auxin sy	99.68
2zy4_A	546	L-aspartate beta-decarboxylase; pyridoxal 5'-phosp	99.67
2e7u_A	424	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	99.62
2hox_A	427	ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINA	99.6
3ou5_A	490	Serine hydroxymethyltransferase, mitochondrial; st	99.59
4h51_A	420	Aspartate aminotransferase; ssgcid, structural gen	99.54
4ao9_A	454	Beta-phenylalanine aminotransferase; HET: PLP; 1.5	99.47
2yky_A	465	Beta-transaminase; transferase; HET: PLP SFE; 1.69	99.15
4atq_A	456	4-aminobutyrate transaminase; transferase; HET: PL	99.42
4e3q_A	473	Pyruvate transaminase; aminotransferase, transfera	99.29
4a0g_A	831	Adenosylmethionine-8-amino-7-oxononanoate aminotra	99.18
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	80.87

>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}

Probab=100.00  E-value=7.5e-75  Score=608.16  Aligned_cols=464  Identities=40%  Similarity=0.778  Sum_probs=421.1

Q ss_pred             CCccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHhhcCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCccc
Q 037144            1 MDQAYAQEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQEHIVPGITHWQSPNYF   80 (502)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~   80 (502)
                      +.+||+++||+.+++++|++.+|+++++++||.|.++|++++..++..+|++|.+.+++++++.+.++++.++|+||+|+
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~   82 (481)
T 4e1o_A            3 LGSMEPEEYRERGREMVDYICQYLSTVRERRVTPDVQPGYLRAQLPESAPEDPDSWDSIFGDIERIIMPGVVHWQSPHMH   82 (481)
T ss_dssp             --CCCHHHHHHHHHHHHHHHHHHHHSGGGSCSSCCCCTTTTGGGSCSSCCSSCCCHHHHHHHHHHHTGGGCCCTTSTTBC
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhccccCCCCCCCCHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCee
Confidence            35799999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCc---CCCCcEEEcCCchHHHHHHH
Q 037144           81 AYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLF---SGNGGGVIQGTTCEALLCTL  157 (502)
Q Consensus        81 ~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~---~~~~~g~~t~ggt~a~~~al  157 (502)
                      +|+++++++|+++++++.+.+|++...|..+|+++++|+++++|+++++|++..+..   .+.++|+||+|||+||++|+
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al  162 (481)
T 4e1o_A           83 AYYPALTSWPSLLGDMLADAINCLGFTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIAL  162 (481)
T ss_dssp             SSSCCCCCHHHHHHHHHHHHHCCCCSSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHH
T ss_pred             EeCCCCCCHHHHHHHHHHHHhCcccCCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999875421   12347899999999999999


Q ss_pred             HHHHHHHHHHhCcc-------C-CCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHh
Q 037144          158 TAARDRVLKKIGRE-------N-ISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVE  229 (502)
Q Consensus       158 ~~a~~~~~~~~~~~-------~-~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~  229 (502)
                      .++|++...+.+..       + .++++|++|+.+|+|+.+++++.|.   +++.||+++  +|+||+++|+++|+++++
T Consensus       163 ~~ar~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~---~~~~v~~~~--~~~~d~~~Le~~i~~~~~  237 (481)
T 4e1o_A          163 LAARKNKILEMKTSEPDADESSLNARLVAYASDQAHSSVEKAGLISLV---KMKFLPVDD--NFSLRGEALQKAIEEDKQ  237 (481)
T ss_dssp             HHHHHHHHHHHHHHCTTSCHHHHHTTEEEEEETTSCHHHHHHHHHHTC---EEEEECCCT--TSCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhcCcccccccccCCeEEEEcCcchHHHHHHHHhCCC---ceEEEEcCC--CCcCCHHHHHHHHHHHHh
Confidence            99998866532111       1 1678999999999999999999998   999999974  579999999999999888


Q ss_pred             cCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcc
Q 037144          230 AELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDC  309 (502)
Q Consensus       230 ~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~  309 (502)
                      +|..|++|++++|+|++|.+|||++|+++|++||+|+|||+||+++.+.+++++..+.+++.+||+++++|||+++|++|
T Consensus       238 ~g~~~~~vv~~~~~t~~G~id~l~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~g~  317 (481)
T 4e1o_A          238 RGLVPVFVCATLGTTGVCAFDCLSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHFDC  317 (481)
T ss_dssp             TTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSC
T ss_pred             CCCCcEEEEEecCCCCCcCcCCHHHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCCCCce
Confidence            88889999999999999999999999999999999999999999998888888888888889999999999999999999


Q ss_pred             eEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHH
Q 037144          310 CCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLF  389 (502)
Q Consensus       310 g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l  389 (502)
                      |+++++++..+...+...+.|+.....     +..+++.+++++++|++.++++|++++.+|.+|+++++++..++++++
T Consensus       318 g~l~~~~~~~l~~~~~~~~~yl~~~~~-----~~~~~~~~~~~~~~r~~~~l~~~~al~~~g~~g~~~~~~~~~~~a~~l  392 (481)
T 4e1o_A          318 TGFWVKDKYKLQQTFSVNPIYLRHANS-----GVATDFMHWQIPLSRRFRSVKLWFVIRSFGVKNLQAHVRHGTEMAKYF  392 (481)
T ss_dssp             EEEEESBHHHHHTTTCCCCGGGCCTTT-----TTSCCGGGGSSSSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEeCHHHHHHHhcCCchhccCccc-----CCCCCcccccccCCCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence            999999998777777778889876431     234677889999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC
Q 037144          390 ERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG  469 (502)
Q Consensus       390 ~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~  469 (502)
                      ++.|+++|+|+++.++.+++++|++.+.                           +..+.++.++|.++|.++++++.+.
T Consensus       393 ~~~L~~~~g~~~~~~~~~~~v~f~~~~~---------------------------~~~~~~l~~~L~~~g~~~~~~~~~~  445 (481)
T 4e1o_A          393 ESLVRNDPSFEIPAKRHLGLVVFRLKGP---------------------------NSLTENVLKEIAKAGRLFLIPATIQ  445 (481)
T ss_dssp             HHHHHTCTTEECCSCCCSSEEEEEESSC---------------------------HHHHHHHHHHHHHHCSSBCEEEEET
T ss_pred             HHHHhcCCCeEEecCCceeEEEEEeCCc---------------------------hHHHHHHHHHHHhCCeEEEEeeEEC
Confidence            9999999999998888899999998653                           3456788999999998888898899


Q ss_pred             CEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          470 GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       470 g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      |..++|+++++++++++||+++++.|++++++
T Consensus       446 g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~~  477 (481)
T 4e1o_A          446 DKLIIRFTVTSQFTTRDDILRDWNLIRDAATL  477 (481)
T ss_dssp             TEEEEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999998764

>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6

Probab=100.00  E-value=5.4e-75  Score=607.84  Aligned_cols=460  Identities=43%  Similarity=0.811  Sum_probs=399.6

Q ss_pred             cCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHhhcCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCcccccC
Q 037144            4 AYAQEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYF   83 (502)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~   83 (502)
                      ||+++||+.+++++|++.+|+++++++||.|.++|++|++.++..+|++|.+.+++++++.+.+.++.++|+||+|++|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~   80 (475)
T 3k40_A            1 MEAPEFKDFAKTMVDFIAEYLENIRERRVLPEVKPGYLKPLIPDAAPEKPEKWQDVMQDIERVIMPGVTHWHSPKFHAYF   80 (475)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTGGGSCSSCSSCTTCSGGGSCSSCCSSCCCHHHHHHHHHHHTGGGCCCTTCTTBCCSS
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhccccCCCCCCCCHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhccCCCCCCcCceeeC
Confidence            78999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCc--CCCCcEEEcCCchHHHHHHHHHHH
Q 037144           84 PATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLF--SGNGGGVIQGTTCEALLCTLTAAR  161 (502)
Q Consensus        84 ~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~--~~~~~g~~t~ggt~a~~~al~~a~  161 (502)
                      ++++.+++++++++.+.+|++...|..+|.++++|+++++|+++++|+|..+..  .+.++|+||+|||+||++|+.++|
T Consensus        81 ~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar  160 (475)
T 3k40_A           81 PTANSYPAIVADMLSGAIACIGFTWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAK  160 (475)
T ss_dssp             CCCCCHHHHHHHHHHHHHCCCSSSCCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHH
T ss_pred             CCCCcHHHHHHHHHHHHhCccccCccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999875422  123479999999999999999999


Q ss_pred             HHHHHHhCccC--------CCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCc
Q 037144          162 DRVLKKIGREN--------ISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELI  233 (502)
Q Consensus       162 ~~~~~~~~~~~--------~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~  233 (502)
                      ++...+.+..+        .++++|++|..+|+|+.+++++.|+   +++.||+++  ++ ||+++|+++|+++++++..
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~vi~s~~~H~s~~~~~~~~g~---~~~~v~~d~--~~-~d~~~L~~~i~~~~~~~~~  234 (475)
T 3k40_A          161 AKKLKEVKELHPEWDEHTILGKLVGYCSDQAHSSVERAGLLGGV---KLRSVQSEN--HR-MRGAALEKAIEQDVAEGLI  234 (475)
T ss_dssp             HHHHHHHHHHCTTSCHHHHHHHEEEEEETTSCHHHHHHHHHHTC---EEEEECCBT--TB-CCHHHHHHHHHHHHHTTCE
T ss_pred             HHHHHHhhccCcccccccccCCeEEEECCCchHHHHHHHHHcCC---ceEEEECCC--CC-cCHHHHHHHHHHHHHCCCc
Confidence            88654321111        1467999999999999999999999   999999974  57 9999999999998888888


Q ss_pred             cEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEE
Q 037144          234 PLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLW  313 (502)
Q Consensus       234 p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~  313 (502)
                      |++|++++|+|++|.+|||++|+++|++||+|+|||+||+++.+.++.++..+.+++++||+++++|||+++|++||+++
T Consensus       235 ~~~v~~~~~~t~~G~~~~l~~I~~la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p~g~g~l~  314 (475)
T 3k40_A          235 PFYAVVTLGTTNSCAFDYLDECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVNFDCSAMW  314 (475)
T ss_dssp             EEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEE
T ss_pred             cEEEEEEecCCCCcCcCCHHHHHHHHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccCCCCceEEEE
Confidence            99999999999999999999999999999999999999999988888888888888899999999999999999999999


Q ss_pred             eeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHH
Q 037144          314 VKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLV  393 (502)
Q Consensus       314 ~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l  393 (502)
                      ++++..+...+...+.|+.....     +..+++.+++++++|++.++++|++++.+|.+|+++++++..++++++++.|
T Consensus       315 ~~~~~~l~~~~~~~~~yl~~~~~-----~~~~~~~~~~~~~sr~~~~l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~L  389 (475)
T 3k40_A          315 LKDPSWVVNAFNVDPLYLKHDMQ-----GSAPDYRHWQIPLGRRFRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLC  389 (475)
T ss_dssp             ESSGGGC--------------------------------CCCGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EeCHHHHHHHhcCCccccCCCcC-----CCCCCcccccccCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence            99987766667777888865421     2346778899999999999999999999999999999999999999999999


Q ss_pred             hcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEE
Q 037144          394 TSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYV  473 (502)
Q Consensus       394 ~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~  473 (502)
                      +++|+|+++.++.+++|+|++.+.                           +..+.++.++|.++|.++++++.+.|..+
T Consensus       390 ~~~~g~~l~~~~~~~iv~f~~~~~---------------------------~~~~~~l~~~L~~~g~~~~~~~~~~g~~~  442 (475)
T 3k40_A          390 VADSRFELAAEINMGLVCFRLKGS---------------------------NERNEALLKRINGRGHIHLVPAKIKDVYF  442 (475)
T ss_dssp             HHSTTEEESSCCBTTEEEEEESSC---------------------------HHHHHHHHHHHHHHTSCBCEEEEETTEEE
T ss_pred             hcCCCEEEecCCceEEEEEEeCCc---------------------------hHHHHHHHHHHHhCCcEEEEeeEECCEEE
Confidence            999999999888899999998653                           34567889999999998899999999999


Q ss_pred             EEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          474 LRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       474 lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      +|+++++++++++||+++++.|++++++
T Consensus       443 lR~~~~~~~tt~~di~~~~~~i~~~~~~  470 (475)
T 3k40_A          443 LRMAICSRFTQSEDMEYSWKEVSAAADE  470 (475)
T ss_dssp             EEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999998764

>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*

Probab=100.00  E-value=1.1e-68  Score=563.03  Aligned_cols=463  Identities=43%  Similarity=0.828  Sum_probs=402.1

Q ss_pred             cCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHhhcCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCcccccC
Q 037144            4 AYAQEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYF   83 (502)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~   83 (502)
                      ||+++||+++++++|++.+|++++.++||.|.++|+++++.++..+|++|.+++++++++.+.+.++..+|+||+|++|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~   80 (486)
T 1js3_A            1 MNASDFRRRGKEMVDYMADYLEGIEGRQVYPDVQPGYLRPLIPATAPQEPDTFEDILQDVEKIIMPGVTHWHSPYFFAYF   80 (486)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTGGGSCSSCCCCTTCSGGGSCSSCCSSCCCHHHHHHHHHHTTGGGCCCTTSTTBCSSS
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCHHHHHHhccccCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCceEeC
Confidence            78999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCc--CCCCcEEEcCCchHHHHHHHHHHH
Q 037144           84 PATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLF--SGNGGGVIQGTTCEALLCTLTAAR  161 (502)
Q Consensus        84 ~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~--~~~~~g~~t~ggt~a~~~al~~a~  161 (502)
                      ++++.+|+.+++++...+|++...|..+|..+++|+++++|+++++|++..+..  .+.++|++|+|||+||++++.+++
T Consensus        81 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~  160 (486)
T 1js3_A           81 PTASSYPAMLADMLCGAIGCIGFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAAR  160 (486)
T ss_dssp             CCCCCHHHHHHHHHHHHHCCCCSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHhCcCccccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999864311  012368999999999999999998


Q ss_pred             HHHHHHhCcc-C-------CCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCc
Q 037144          162 DRVLKKIGRE-N-------ISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELI  233 (502)
Q Consensus       162 ~~~~~~~~~~-~-------~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~  233 (502)
                      +...++.+.. |       .++.+|++|..+|+|+.++++.+|+   .++.||++.  +|+||+++|+++|++++++|.+
T Consensus       161 ~~~~~~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~~~~~~~G~---~v~~v~~d~--~~~~d~~~L~~~i~~~~~~g~~  235 (486)
T 1js3_A          161 TKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGV---KLKAIPSDG--KFAMRASALQEALERDKAAGLI  235 (486)
T ss_dssp             HHHHHHHHHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHTC---EEEEECCCT--TSCCCHHHHHHHHHHHHHTTCE
T ss_pred             HHHhhhhhccCccchhcccCCCEEEEECCCCcHHHHHHHHhCCC---ceEEeecCC--CCCCCHHHHHHHHHHHHhCCCC
Confidence            7654321100 0       0245789999999999999999999   999999974  6799999999999999988999


Q ss_pred             cEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEE
Q 037144          234 PLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLW  313 (502)
Q Consensus       234 p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~  313 (502)
                      |++|++++|+|++|.+||+++|+++|++||+|+|||+|||++.+.++++++.+.+++++||+++++|||+++|++||+++
T Consensus       236 p~~vv~~~~~n~tG~~~~l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~p~~~G~l~  315 (486)
T 1js3_A          236 PFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNFDCSAMW  315 (486)
T ss_dssp             EEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSCCSSCEEEE
T ss_pred             ceEEEEeCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcCCCcceEEEE
Confidence            99999999999999999999999999999999999999999988888888877788899999999999999999999999


Q ss_pred             eeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHH
Q 037144          314 VKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLV  393 (502)
Q Consensus       314 ~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l  393 (502)
                      ++++..+.+.+...+.|+......   .....++.+++++++||+.++++|++++.+|.+|+++++++..++++++.+.|
T Consensus       316 ~~~~~~l~~~~~~~~~yl~~~~~~---~~~~~~~~~~~~~~~rr~~~~~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L  392 (486)
T 1js3_A          316 VKRRTDLTGAFKLDPVYLKHSHQG---SGLITDYRHWQLPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFV  392 (486)
T ss_dssp             ESCHHHHHGGGC---------------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EeCHHHHHHHhcCCchhhCCCccc---ccCCCCccccCCCCCCchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence            998876556666667787653211   11235666788999999999999999999999999999999999999999999


Q ss_pred             hcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEE
Q 037144          394 TSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYV  473 (502)
Q Consensus       394 ~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~  473 (502)
                      +++|+++++.+|.+++++|++.+.                           +..+.++.++|.++|.++++++.+.+..+
T Consensus       393 ~~~~~~~~~~~~~~~~v~f~~~~~---------------------------~~~~~~l~~~L~~~g~~~~~~~~~~~~~~  445 (486)
T 1js3_A          393 LQDPRFEVCAEVTLGLVCFRLKGS---------------------------DGLNEALLERINSARKIHLVPCRLRGQFV  445 (486)
T ss_dssp             HHCTTEEECSCCCSSEEEEEESSC---------------------------HHHHHHHHHHHHHHTSCBCEEEEETTEEE
T ss_pred             hcCCCeEEeCCCceeEEEEEecCh---------------------------HHHHHHHHHHHHhcCCEEEEEEEECCEEE
Confidence            999999998778889999998643                           33457888888889988888888888999


Q ss_pred             EEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          474 LRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       474 lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      +|+++++++++++||+++++.|++++++
T Consensus       446 lRi~~~~~~~t~~di~~~~~~l~~~~~~  473 (486)
T 1js3_A          446 LRFAICSRKVESGHVRLAWEHIRGLAAE  473 (486)
T ss_dssp             EEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence            9999988989999999999999987654

>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*

Probab=100.00  E-value=1.2e-67  Score=557.04  Aligned_cols=475  Identities=21%  Similarity=0.354  Sum_probs=414.7

Q ss_pred             cCHHHHHHHHHHHHHHHHHHHHhcCCC--CCCCCCCchhHhhc---CCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCc
Q 037144            4 AYAQEFRRQGHMFVDFMAEYYKNIDKY--PVRSQVEPGYLKKR---LPESAPYSPESVETILQDVQEHIVPGITHWQSPN   78 (502)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~---~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~   78 (502)
                      -+.++++..+++++|++.+|++++.++  +|.+.++|++|+..   ++..+|++|.+++++++++.+.+.++ .+|+||+
T Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~p~   97 (511)
T 3vp6_A           19 NGEEQTVQFLLEVVDILLNYVRKTFDRSTKVLDFHHPHQLLEGMEGFNLELSDHPESLEQILVDCRDTLKYG-VRTGHPR   97 (511)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHTCTTSCSCCCCCHHHHHHCBTTBCCCCCSSCCCHHHHHHHHHHHHHTS-CCTTSTT
T ss_pred             CChHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHhhcc-CCCCCCC
Confidence            367899999999999999999998765  57788999999999   89999999999999999999888776 5579999


Q ss_pred             ccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHH
Q 037144           79 YFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLT  158 (502)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~  158 (502)
                      ||||+++++.+++++++++.+.+|++...|..+|+.+++|+++++|+++++|++.+.     .+++||+|||+||+.|+.
T Consensus        98 f~~~~~~~~~~~~~~~e~l~~~~~~~~~~~~~~p~~~~le~~~~~~l~~~~g~~~~~-----~~~~~t~ggt~a~~~al~  172 (511)
T 3vp6_A           98 FFNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIVGWSSKD-----GDGIFSPGGAISNMYSIM  172 (511)
T ss_dssp             EESSSSCCCCHHHHHHHHHHHHHCCCSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSS-----CEEEEESSHHHHHHHHHH
T ss_pred             ceEeecCCCcHHHHHHHHHHHHhccCCCCcccCchHHHHHHHHHHHHHHHhCCCCCC-----CceEECCchHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999998531     379999999999999999


Q ss_pred             HHHHHHHH---HhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccE
Q 037144          159 AARDRVLK---KIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPL  235 (502)
Q Consensus       159 ~a~~~~~~---~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~  235 (502)
                      ++++++++   +.|..+.++++|++|..+|+|+.++++++|+|..+++.||++.  +|+||+++|+++|+++.++|.+|+
T Consensus       173 ~a~~~~~~~~~~~G~~~~~~~~v~~s~~~H~s~~~~~~~~g~g~~~~~~v~~d~--~~~~d~~~Le~~i~~~~~~g~~~~  250 (511)
T 3vp6_A          173 AARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKCNE--RGKIIPADFEAKILEAKQKGYVPF  250 (511)
T ss_dssp             HHHHHHCTHHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCT--TSCBCHHHHHHHHHHHHHTTCEEE
T ss_pred             HHHHHhhhhhhhcCcccCCCeEEEECCCchHHHHHHHHHcCCCCCcEEEeecCC--CCccCHHHHHHHHHHHHhcCCCcE
Confidence            99986532   2233334678999999999999999999999888899999985  579999999999999888888899


Q ss_pred             EEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEee
Q 037144          236 FLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVK  315 (502)
Q Consensus       236 ~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r  315 (502)
                      +|++++|+|++|.+|||++|+++|++||+|+|||+||+++.+.+++++..+.|++++||+++++||||++|.+||+++++
T Consensus       251 ~vv~~~~~~~~G~vd~l~~I~~ia~~~~~~lhvD~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p~g~g~l~~~  330 (511)
T 3vp6_A          251 YVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVK  330 (511)
T ss_dssp             EEEEEBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEES
T ss_pred             EEEEecCCCCCcccccHHHHHHHHHHcCCEEEEEccchhhHhhChhhhhhccCCccCCEEEECcccccCCCcCeEEEEEe
Confidence            99999999999999999999999999999999999999999999999988889999999999999999999999999999


Q ss_pred             CchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc
Q 037144          316 DPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTS  395 (502)
Q Consensus       316 ~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~  395 (502)
                      ++..+...+...+.|+......   ....+++.+++++++|++.++++|++++.+|.+|+++++++..++++++++.|++
T Consensus       331 ~~~~~~~~~~~~~~yl~~~~~~---~~~~~~~~~~~~~~~r~~~al~~~~al~~~g~~gl~~~~~~~~~~a~~l~~~L~~  407 (511)
T 3vp6_A          331 EKGILQGCNQMHASYLFQQDKH---YDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKN  407 (511)
T ss_dssp             STTHHHHHHCCCCTTTCCSSCS---SCGGGCCGGGSSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             CHHHHHHHhccCCccccCcccc---cccccCccCCCCCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            9887777777888898764432   2345677889999999999999999999999999999999999999999999999


Q ss_pred             CCCeEEec--CCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECC-EE
Q 037144          396 DKRFEVAF--PRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGG-IY  472 (502)
Q Consensus       396 ~~~~~l~~--~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g-~~  472 (502)
                      +|+|+++.  +|.+++++|++.|...+..            ..........+..+.++.++|.++|.+++.++...+ ..
T Consensus       408 ~pg~~l~~~~~p~~~~v~f~~~p~~~~~~------------~~~~~~~~~l~~~~~~l~~~L~~~G~~~~~~~~~~~~~~  475 (511)
T 3vp6_A          408 REEFEMVFNGEPEHTNVCFWYIPQSLRGV------------PDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKAN  475 (511)
T ss_dssp             CTTEEESSSSCCSSSCEEEEECCGGGSSC------------CCCHHHHHHHHHHHHHHHHHHHHHTSCEEEEEEETTEEE
T ss_pred             CCCEEEEecCCCCeEEEEEEEeCcccccc------------ccchhHHHHHHHHHHHHHHHHHhcCCEEEEEEEeCCceE
Confidence            99999987  5888999999987542110            000011223456677899999999988777655554 46


Q ss_pred             EEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          473 VLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       473 ~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      ++|++++++.++++||++++++|+++++.
T Consensus       476 ~lRi~~~~~~~t~~di~~ll~~i~~~~~~  504 (511)
T 3vp6_A          476 FFRMVISNPAATQSDIDFLIEEIERLGQD  504 (511)
T ss_dssp             EEEECCCCTTCCHHHHHHHHHHHHHHHC-
T ss_pred             EEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence            89999989999999999999999998764

>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*

Probab=100.00  E-value=1.4e-64  Score=533.96  Aligned_cols=475  Identities=21%  Similarity=0.353  Sum_probs=402.4

Q ss_pred             cCHHHHHHHHHHHHHHHHHHHHhcCCC--CCCCCCCchhHhhc---CCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCc
Q 037144            4 AYAQEFRRQGHMFVDFMAEYYKNIDKY--PVRSQVEPGYLKKR---LPESAPYSPESVETILQDVQEHIVPGITHWQSPN   78 (502)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~---~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~   78 (502)
                      |++++||++++++++++.+|++++.++  ||.|.++|++|+..   ++..+|++|.+.+++++++.+.+.++.. +.||+
T Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~p~   94 (504)
T 2okj_A           16 NGEEQTVQFLLEVVDILLNYVRKTFDRSTKVLDFHHPHQLLEGMEGFNLELSDHPESLEQILVDCRDTLKYGVR-TGHPR   94 (504)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHTCTTSCSCCCCCHHHHHSCBTTBCCCCCSSCCCHHHHHHHHHHHHHTSCC-TTCTT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHHhhccCC-CCCCC
Confidence            899999999999999999999998774  49999999999999   9999999999999999999887766654 45999


Q ss_pred             ccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHH
Q 037144           79 YFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLT  158 (502)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~  158 (502)
                      |++|++++..+++++++++.+++|++...|..+|..+++|+++++|+++++|++...     .+++||+|||+||++++.
T Consensus        95 ~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~-----~~~~~t~ggtea~~~al~  169 (504)
T 2okj_A           95 FFNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIVGWSSKD-----GDGIFSPGGAISNMYSIM  169 (504)
T ss_dssp             EESSSSCCCCHHHHHHHHHHHHHCCBSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSS-----CEEEEESSHHHHHHHHHH
T ss_pred             EEEEccCCCCHHHHHHHHHHHhhccCCCchhhChHHHHHHHHHHHHHHHHhCCCCCC-----CCEEEeCCcHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999998311     269999999999999999


Q ss_pred             HHHHHHHH---HhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccE
Q 037144          159 AARDRVLK---KIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPL  235 (502)
Q Consensus       159 ~a~~~~~~---~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~  235 (502)
                      +++++..+   +.|....++.+|++|..+|+|+.++++.+|+|.++++.||+++  +|+||+++|+++|+++.++|..|.
T Consensus       170 ~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~g~~~~  247 (504)
T 2okj_A          170 AARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKCNE--RGKIIPADFEAKILEAKQKGYVPF  247 (504)
T ss_dssp             HHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCT--TSCBCHHHHHHHHHHHHHTTCEEE
T ss_pred             HHHHHHhhHHhhcCccccCCeEEEECCcchHHHHHHHHHcCCCcccEEEEecCC--CCCCCHHHHHHHHHHHHHCCCCce
Confidence            99875321   1111111255899999999999999999999776899999974  579999999999998887788899


Q ss_pred             EEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEee
Q 037144          236 FLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVK  315 (502)
Q Consensus       236 ~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r  315 (502)
                      +|++++|+|++|.++|+++|+++|++||+|+|||+||+++.+.+++++..+.+++++||+++++|||+++|++||+++++
T Consensus       248 ~V~~~~~~~~tG~i~~l~~I~~la~~~g~~lhvD~a~~~~~~~~~~~~~~~~g~~~~D~i~~~~hK~~~~p~~~g~l~~~  327 (504)
T 2okj_A          248 YVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVK  327 (504)
T ss_dssp             EEEECBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEES
T ss_pred             EEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEehhhhhHHHhCHhhHhhcCCcccCCEEEECchhhcCCCcceEEEEEE
Confidence            99999999999999999999999999999999999999999888888777888889999999999999999999999999


Q ss_pred             CchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc
Q 037144          316 DPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTS  395 (502)
Q Consensus       316 ~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~  395 (502)
                      ++..+...+...++|+......   .+..+++.+++++++||++++++|++++.+|.+|+++++++..+++++|.+.|++
T Consensus       328 ~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~~~~rr~~~l~~~a~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~  404 (504)
T 2okj_A          328 EKGILQGCNQMCAGYLFQPDKQ---YDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKN  404 (504)
T ss_dssp             STTHHHHHHCCCCSSSCCSCCS---SCGGGCCGGGSSCSSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CHHHHHHHhcCCCccccCCccc---ccCcCCcccCCCCCCCCccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            8766655566778888643321   1233567788999999999999999999999999999999999999999999999


Q ss_pred             CCCeEEec--CCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCE-E
Q 037144          396 DKRFEVAF--PRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGI-Y  472 (502)
Q Consensus       396 ~~~~~l~~--~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~-~  472 (502)
                      +|+++++.  +|..++++|++.+.....          ..  .........++.+.++.++|.++|.+++.++.+.+. .
T Consensus       405 ~~~~~~~~~~~p~~~~v~f~~~~~~~~~----------~~--~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~  472 (504)
T 2okj_A          405 REEFEMVFNGEPEHTNVCFWYIPQSLRG----------VP--DSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKAN  472 (504)
T ss_dssp             CTTEEESSSSCCSSSCEEEEECCGGGSS----------CC--CCHHHHHHHTTHHHHHHHHHHHHTSCEEEEEEETTEEE
T ss_pred             CCCEEEEecCCCCeEEEEEEEeCccccc----------cc--cchhhHHHHHHHHHHHHHHHHhCCcEEEEeeEECCceE
Confidence            99999987  578889999986531100          00  000001122334678889999999888877777665 7


Q ss_pred             EEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          473 VLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       473 ~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      ++|++++|+.++++||+++++.|++++++
T Consensus       473 ~lRis~~~~~~t~edi~~~~~~l~~~~~~  501 (504)
T 2okj_A          473 FFRMVISNPAATQSDIDFLIEEIERLGQD  501 (504)
T ss_dssp             EEEECCCCTTCCHHHHHHHHHHHHHHHTC
T ss_pred             EEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence            99999988999999999999999998765

>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}

Probab=100.00  E-value=1.4e-63  Score=527.48  Aligned_cols=475  Identities=22%  Similarity=0.342  Sum_probs=397.3

Q ss_pred             ccCHHHHHHHHHHHHHHHHH-HHHhcCC--CCCCCCCCchhHhhcCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCcc
Q 037144            3 QAYAQEFRRQGHMFVDFMAE-YYKNIDK--YPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQEHIVPGITHWQSPNY   79 (502)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~   79 (502)
                      +|++++||++++++++++.+ |++++..  +||.|.++|++++..++..+|++|.+.+++++++.+.+.++.. +.||+|
T Consensus        33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~p~~  111 (515)
T 2jis_A           33 AGDPVAVEALLRAVFGVVVDEAIQKGTSVSQKVCEWKEPEELKQLLDLELRSQGESQKQILERCRAVIRYSVK-TGHPRF  111 (515)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHTTTGGGCTTSCSCCCCCHHHHHHHHCCCCCSSCCCHHHHHHHHHHHHHHSCC-TTSTTE
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCHHHHHhhcccCCCCCCCCHHHHHHHHHHHhcCCCC-CCCCCe
Confidence            58999999999999999999 9998765  4999999999999999999999999999999999987766654 459999


Q ss_pred             cccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHH
Q 037144           80 FAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTA  159 (502)
Q Consensus        80 ~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~  159 (502)
                      ++|++++..+++++++++...+|++...|..+|.++++|.++++|+++++|++..       +++||+|||+||++++.+
T Consensus       112 ~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~s~~~~~le~~~~~~la~l~g~~~~-------~~~~t~ggtea~~~al~~  184 (515)
T 2jis_A          112 FNQLFSGLDPHALAGRIITESLNTSQYTYEIAPVFVLMEEEVLRKLRALVGWSSG-------DGIFCPGGSISNMYAVNL  184 (515)
T ss_dssp             ESSSCCCCCHHHHHHHHHHHHHCCCTTCTTTCHHHHHHHHHHHHHHHHHHTCSSC-------EEEEESSHHHHHHHHHHH
T ss_pred             EEEeeCCCCHHHHHHHHHHHHhccCCCchhhchHHHHHHHHHHHHHHHHhCCCCC-------CeEEcCCcHHHHHHHHHH
Confidence            9999999999999999999989999889999999999999999999999999843       699999999999999999


Q ss_pred             HHHHHH---HHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEE
Q 037144          160 ARDRVL---KKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLF  236 (502)
Q Consensus       160 a~~~~~---~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~  236 (502)
                      +|+++.   +..|..+.++.+|++|..+|+|+.++++.+|+|..+++.||+++  +++||+++|+++|+++.++|.+|.+
T Consensus       185 ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~~~~~~~~g~g~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~g~~~~~  262 (515)
T 2jis_A          185 ARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQKGAAFLGLGTDSVRVVKADE--RGKMVPEDLERQIGMAEAEGAVPFL  262 (515)
T ss_dssp             HHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCT--TSCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred             HHHHHhhHHhhcCccccCCeEEEECCCccHHHHHHHHHcCCCCCcEEEEecCC--CCcCCHHHHHHHHHHHHhCCCCcEE
Confidence            987542   11121112356899999999999999999999877899999975  5799999999999988777878999


Q ss_pred             EEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeC
Q 037144          237 LCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKD  316 (502)
Q Consensus       237 Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~  316 (502)
                      |++++|+|++|.++|+++|+++|++||+|+|||+||+++.+.++.++..+.+++++||+++++|||+++|++||++++++
T Consensus       263 Vv~~~~~n~tG~i~~l~~I~~la~~~g~~l~vD~a~~~~~~~~~~~~~~~~g~~~aD~v~~s~hK~l~~p~g~G~l~~~~  342 (515)
T 2jis_A          263 VSATSGTTVLGAFDPLEAIADVCQRHGLWLHVDAAWGGSVLLSQTHRHLLDGIQRADSVAWNPHKLLAAGLQCSALLLQD  342 (515)
T ss_dssp             EEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESC
T ss_pred             EEEeCCCCCCCCccCHHHHHHHHHHcCCeEEEehhhhhHHHhChhhHhhcCCCccCCEEEECcccccCCCCCeeEEEEeC
Confidence            99999999999999999999999999999999999999999888888778888899999999999999999999999998


Q ss_pred             c-hhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc
Q 037144          317 P-SCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTS  395 (502)
Q Consensus       317 ~-~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~  395 (502)
                      + ..+...+...++|+......   ....+++..++++++||++++++|++++.+|.+|+++++++..++++++.+.|++
T Consensus       343 ~~~~~~~~~~~~~~yl~~~~~~---~~~~~~~~~~~~~~~rr~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~  419 (515)
T 2jis_A          343 TSNLLKRCHGSQASYLFQQDKF---YDVALDTGDKVVQCGRRVDCLKLWLMWKAQGDQGLERRIDQAFVLARYLVEEMKK  419 (515)
T ss_dssp             CSCHHHHHHCC---------CC---SCGGGCCGGGCSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hHHHHHHHhcCCchhccCCccc---ccccCCCCCCCCCCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            8 55555566677888543221   1233566778889999999999999999999999999999999999999999999


Q ss_pred             CCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECC-EEEE
Q 037144          396 DKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGG-IYVL  474 (502)
Q Consensus       396 ~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g-~~~l  474 (502)
                      +|+++++.++..++++|++.|......         .+   ...-...+++.+..+.+.+.++|.++++++.+.+ ..++
T Consensus       420 ~~g~~~~~~~~~~~v~f~~~p~~~~~~---------~~---~~~~~~~l~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~l  487 (515)
T 2jis_A          420 REGFELVMEPEFVNVCFWFVPPSLRGK---------QE---SPDYHERLSKVAPVLKERMVKEGSMMIGYQPHGTRGNFF  487 (515)
T ss_dssp             STTEEESSCCSSSEEEEEECCGGGTTC---------TT---STTHHHHHHTHHHHHHHHHHHHTSCEEEEEEETTEEEEE
T ss_pred             CCCEEEeCCCCeeEEEEEEeCcccccc---------cc---chhHHHHHHHHHHHHHHHHHhcCCEEEEEEEECCceEEE
Confidence            999999987778899999865321000         00   0000122334456788889999988877766655 4799


Q ss_pred             EEEecCCCCcHHHHHHHHHHHHHHHHhC
Q 037144          475 RFAAGNSMTMESHVRAAWTVVQEHLEAF  502 (502)
Q Consensus       475 R~~~~~~~t~~~di~~~~~~l~~~~~~~  502 (502)
                      |++++++.++++||+++++.|+++++++
T Consensus       488 Ris~~~~~~t~edid~~~~~l~~~~~~~  515 (515)
T 2jis_A          488 RVVVANSALTCADMDFLLNELERLGQDL  515 (515)
T ss_dssp             EEECCCTTCCHHHHHHHHHHHHHHHTTC
T ss_pred             EEEeCCCCCCHHHHHHHHHHHHHHHhhC
Confidence            9999788899999999999999988753

>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}

Probab=100.00  E-value=9.1e-63  Score=519.21  Aligned_cols=459  Identities=22%  Similarity=0.360  Sum_probs=388.4

Q ss_pred             ccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHhhcCCC-CCCCCCCCHHHHHHHHHHhhcCCCCCCCCCcccc
Q 037144            3 QAYAQEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPE-SAPYSPESVETILQDVQEHIVPGITHWQSPNYFA   81 (502)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~   81 (502)
                      +++.++||+++++++|.+.+|+++.+ +| .+.++|+++++.++. .+|++|.+++++++++.+.++++.++|+||+||+
T Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~  105 (497)
T 2qma_A           28 ELGSAEFASVMSHTTSAMKSVFEQVN-AP-YSGMDPKALEDAINAVDLDNKNAPLKSVIDDVAELVAKNAIFTQHPDCIA  105 (497)
T ss_dssp             TTTTHHHHHHHHHHHHHHHHHHHHCC-SS-SCCCCHHHHHHHHHTCCSSSCCCCHHHHHHHHHHHTTTTSCCTTSTTBCS
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhhcc-CC-CCCCCHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCeeE
Confidence            57899999999999999999999984 44 788899999999987 4899999999999999999999999999999999


Q ss_pred             cCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHH
Q 037144           82 YFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAAR  161 (502)
Q Consensus        82 ~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~  161 (502)
                      |+.+++.+++++++++...+|++...|..+|..+++|+++++|+++++|++...      .++||+|||+||+.++.++|
T Consensus       106 ~~~~~~~~~~v~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~------~~~~t~ggt~a~~~al~~ar  179 (497)
T 2qma_A          106 HLHTPPLMPAVAAEAMIAALNQSMDSWDQASSATYVEQKVVNWLCDKYDLSEKA------DGIFTSGGTQSNQMGLMLAR  179 (497)
T ss_dssp             SSCCCCBHHHHHHHHHHHHHCCCTTCGGGCHHHHHHHHHHHHHHHHHTTCCTTC------EEEEESSHHHHHHHHHHHHH
T ss_pred             eCCCCCcHHHHHHHHHHHhhcccccchhhChHHHHHHHHHHHHHHHHhCCCCCC------CeEEcCCchHHHHHHHHHHH
Confidence            999999999999999999999988889999999999999999999999997532      69999999999999999998


Q ss_pred             HHHHHHh-C----ccCC----CCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCC
Q 037144          162 DRVLKKI-G----RENI----SKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAEL  232 (502)
Q Consensus       162 ~~~~~~~-~----~~~~----~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~  232 (502)
                      +++..+. +    ..|.    ++.+|+++..+|+|+.++++.+|+|.++++.||+++  +++||+++|+++|+++.++|.
T Consensus       180 ~~~~~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~  257 (497)
T 2qma_A          180 DWIADKLSGHSIQKLGLPDYADKLRIVCSKKSHFTVQKSASWMGLGEKAVMTVDANA--DGTMDITKLDEVIAQAKAEGL  257 (497)
T ss_dssp             HHHHHHHHCCCHHHHCSCGGGGGEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCT--TSSBCGGGHHHHHHHHHHTTC
T ss_pred             HHHHHhhcccchhhcccccccCCeEEEECCCchHHHHHHHHHcCCCcccEEEEecCC--CCcCCHHHHHHHHHHHHHCCC
Confidence            7654210 0    0111    244899999999999999999999766799999974  579999999999998877777


Q ss_pred             ccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEE
Q 037144          233 IPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCL  312 (502)
Q Consensus       233 ~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~  312 (502)
                      +|++|+++.|+|++|.+||+++|+++|++||+|+|||+||+++...++ ++..+.+++++|++++++|||+++|++||++
T Consensus       258 ~~~~vv~~~~~~~tG~~~~l~~I~~l~~~~~~~l~vD~a~~~~~~~~~-~~~~~~gi~~~D~i~~s~hK~l~~p~~~G~l  336 (497)
T 2qma_A          258 IPFAIVGTAGTTDHGAIDDLDFIADMAVKHDMWMHVDGAYGGALILSS-HKSRLKGVERAHSISVDFHKLFYQTISCGAL  336 (497)
T ss_dssp             EEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGST-TGGGGTTGGGCSEEEEETTTTTCCCSSCEEE
T ss_pred             cceEEEEcCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhhHHHHhCc-chHhhcCcccCCEEEEcchhccCCCcceEEE
Confidence            788999999999999999999999999999999999999999988777 6666778889999999999999999999999


Q ss_pred             EeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHH
Q 037144          313 WVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERL  392 (502)
Q Consensus       313 ~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~  392 (502)
                      +++++..+. .+...+.|+.....      ...++..++++++|++.++++|++++.+|.+|+++++++..+++++|.+.
T Consensus       337 ~~~~~~~~~-~~~~~~~yl~~~~~------~~~~~~~~~~~~~r~~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~  409 (497)
T 2qma_A          337 LVNDKSNFK-FLLHHADYLNREHD------ELPNLVDKSIATTKRFDALKVFMTMQNVGPKALGDMYDHLLAQTLEVADM  409 (497)
T ss_dssp             EESCGGGGG-GGCC--------------------------CCSCCCTHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEeCHHHHH-HhcCCchhcCCccc------cCCCccccCCCCCCchhHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence            999887543 45455667754221      12455667889999999999999999999999999999999999999999


Q ss_pred             HhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEE
Q 037144          393 VTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIY  472 (502)
Q Consensus       393 l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~  472 (502)
                      |+++|+++++.++..++++|++.+...                       ..++++.++.+.+.++|.++++++.+.+..
T Consensus       410 L~~~~~~~~~~~~~~~~v~f~~~~~~~-----------------------~~~~l~~~l~~~l~~~G~~~~~~~~~~g~~  466 (497)
T 2qma_A          410 IRTNDQFELLAEPSLSTVLFRATHETA-----------------------DLDELNKALRLEALTRGIAVLGETIVDGKT  466 (497)
T ss_dssp             HHTCTTEEECSCCSSSEEEEEECCSSS-----------------------CHHHHHHHHHHHHHHHTSCBCEEEEETTEE
T ss_pred             HhhCCCeEEEcCCCceEEEEEEcCCcc-----------------------CHHHHHHHHHHHHHhCCCEEEEeeEECCEE
Confidence            999999999878888999999865320                       124566788888999999888888888889


Q ss_pred             EEEEEecCCCCcHHHHHHHHHHHHHHHHhC
Q 037144          473 VLRFAAGNSMTMESHVRAAWTVVQEHLEAF  502 (502)
Q Consensus       473 ~lR~~~~~~~t~~~di~~~~~~l~~~~~~~  502 (502)
                      ++|++++++.++++||+++++.|+++++++
T Consensus       467 ~lRis~~~~~~t~edi~~~~~~l~~~~~~~  496 (497)
T 2qma_A          467 ALKFTILNPCLTTSDFESLLSKINMLAVEL  496 (497)
T ss_dssp             EEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred             EEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Confidence            999999888899999999999999988753

>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*

Probab=100.00  E-value=2.1e-48  Score=405.00  Aligned_cols=407  Identities=15%  Similarity=0.193  Sum_probs=315.2

Q ss_pred             chhHhhcCCCCCCCCCCCHHHHHHHHHHhh-cCCCCCCCCCcccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHH
Q 037144           38 PGYLKKRLPESAPYSPESVETILQDVQEHI-VPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVE  116 (502)
Q Consensus        38 ~~~l~~~~~~~~p~~~~~~~~il~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~  116 (502)
                      ...++..++..+|++|.+.+++++++.+.+ .++..++.||+|++.    +. +..+.+++...++.+...|..+|...+
T Consensus         7 ~~~~~~~~~~~lp~~g~~~~~v~~~~~~~~~~~~~~~~~~~~f~~~----~~-~~~v~e~~~~a~~~~~~~~~~~~~~~~   81 (452)
T 2dgk_A            7 KSISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQT----WD-DENVHKLMDLSINKNWIDKEEYPQSAA   81 (452)
T ss_dssp             --------CCSCCCSCCCHHHHHHHHHHHGGGSCCCTTBCSCCSCC----CC-CHHHHHHHHHTTTCBTTCTTTCHHHHH
T ss_pred             hHHhhhccCCCCCCCCCCHHHHHHHHHHHhcCCCCCccCCCCeeCC----Cc-hHHHHHHHHHHhccCCCChhhChhHHH
Confidence            445667778889999999999999999988 688888899999872    11 245789999999888888999999999


Q ss_pred             HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCC--CCeEEEeCCCCchhHHHHHHH
Q 037144          117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENI--SKLVVYSSDQTHCAFQKAAQI  194 (502)
Q Consensus       117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~--~~~~v~~s~~~H~s~~~aa~~  194 (502)
                      +|+++++|+++++|++....  +...+++|+|||+||++++.++++.+.++....|.  .+++|+++. .|+++.+++++
T Consensus        82 l~~~~~~~la~l~g~~~~~~--~~~~~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~-~h~~~~~~~~~  158 (452)
T 2dgk_A           82 IDLRCVNMVADLWHAPAPKN--GQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARY  158 (452)
T ss_dssp             HHHHHHHHHHHHTTCCCCTT--SCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESS-CCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCcccc--cCCceEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEECC-CcHHHHHHHHH
Confidence            99999999999999976410  00248999999999999999988754322111121  135788899 99999999999


Q ss_pred             cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh------CCEEEe
Q 037144          195 VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF------GIWVHV  268 (502)
Q Consensus       195 ~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~------g~~lhV  268 (502)
                      +|+   +++.||+++ ++|.||+++|+++|+++      +.+|+++.|+|++|.++|+++|+++|++|      |+|+||
T Consensus       159 ~G~---~v~~v~~~~-~~~~~d~~~l~~~i~~~------t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~v  228 (452)
T 2dgk_A          159 WDV---ELREIPMRP-GQLFMDPKRMIEACDEN------TIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHI  228 (452)
T ss_dssp             TTC---EEEECCCBT-TBCSCCHHHHHHHCCTT------EEEEECBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEE
T ss_pred             cCc---eEEEEecCC-CCCeECHHHHHHHHhhC------CEEEEEEcCCcCCcccCCHHHHHHHHHHHhhccCCCCcEEE
Confidence            999   999999975 35899999999999654      46899999999999999999999999996      999999


Q ss_pred             eccccccccc--CccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccC
Q 037144          269 DAAYAGSACI--CPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVG  346 (502)
Q Consensus       269 DaA~g~~~~~--~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~  346 (502)
                      |+||+++..+  .+..+..+ .+.++|++++++|||+++|.++|+++++++..+.+.+...+.|+...            
T Consensus       229 D~a~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~hK~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~------------  295 (452)
T 2dgk_A          229 DAASGGFLAPFVAPDIVWDF-RLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQ------------  295 (452)
T ss_dssp             ECTTGGGTHHHHCTTCCCST-TSTTEEEEEEETTTTTCCCSSCEEEEESSGGGSCGGGCEEECCTTCC------------
T ss_pred             EcccHHHHHHhhCccchhhc-CCCCCcEEEECcccccCCCCCeEEEEEcCHHHHHHHhccCccccCCC------------
Confidence            9999987652  33222222 25689999999999999999999999988754434444445565421            


Q ss_pred             CCcccccCCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC----CCeeEEEEEeecCcchh
Q 037144          347 YKDWQITLCRRF-RSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP----RNFSLVCFRVTPSAVMD  421 (502)
Q Consensus       347 ~~~~~~~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~----~~~~~v~f~~~~~~~~~  421 (502)
                      +..++++++|++ .++++|++++.+|.+++++++++..++++++.+.|+++++++++.+    +..++++|++.+...  
T Consensus       296 ~~~~~~~~~r~~~~~~~~~aal~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~~~~v~f~~~~~~~--  373 (452)
T 2dgk_A          296 IGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGED--  373 (452)
T ss_dssp             EEECCSCCSCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSEEEEEECCTTTBSSEEEEEECTTCC--
T ss_pred             CCCcccCCCChhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCCeEEEEEEecCccc--
Confidence            123456778887 6789999999999999999999999999999999999989999865    578899999865210  


Q ss_pred             hhhhcccCCCcccccccchhHhhHHH-HHHHHHHHHhcCcE---EEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHH
Q 037144          422 KLRTKYKNGTYDQYRQFSEEERTNEF-NRELLESINVSGKV---FMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQE  497 (502)
Q Consensus       422 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~l~~~g~~---~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~  497 (502)
                                             ... ..++.++|.++|+.   +..++...+..++|+++++++| ++|++++++.|++
T Consensus       374 -----------------------~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRis~~~~~t-~e~id~li~~l~~  429 (452)
T 2dgk_A          374 -----------------------PGYTLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFE-MDFAELLLEDYKA  429 (452)
T ss_dssp             -----------------------CSCCHHHHHHHHHHTTCBCCEEECSTTCTTCEEEEEECCTTCC-HHHHHHHHHHHHH
T ss_pred             -----------------------ccCCHHHHHHHHHhcCCeeeeeeCCcccCCeEEEEEEecCCCC-HHHHHHHHHHHHH
Confidence                                   000 14677788888873   3333334467799999987754 7799999999988


Q ss_pred             HHHh
Q 037144          498 HLEA  501 (502)
Q Consensus       498 ~~~~  501 (502)
                      +.+.
T Consensus       430 ~~~~  433 (452)
T 2dgk_A          430 SLKY  433 (452)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7653

>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}

Probab=100.00  E-value=1.3e-45  Score=388.21  Aligned_cols=411  Identities=17%  Similarity=0.240  Sum_probs=326.4

Q ss_pred             CCCCCCchhHhhcCCC-CCCCCCCCHHHHHHHHHHhhcCCCCCCCCCccc-ccCCCCCCHHHHHHHHHHhhcCCCCcccc
Q 037144           32 VRSQVEPGYLKKRLPE-SAPYSPESVETILQDVQEHIVPGITHWQSPNYF-AYFPATSSVAGIVGEMLSSGFNVVGLDWI  109 (502)
Q Consensus        32 ~~~~~~~~~l~~~~~~-~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~-~~~~~~~~~~~~~~~~l~~~~n~~~~~~~  109 (502)
                      ..|...+.++++.+|. .+|++|.+.+++++++.+.+..+    .||+++ +.+. +..++..+.+++...++.+...|.
T Consensus        14 ~~~~~~~~~~~~~lp~~~~p~~~~~~~~~~~~~~~~i~l~----gnp~~~l~s~~-t~~~~~~v~~~l~~~~~~~~~~~~   88 (502)
T 3hbx_A           14 VHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLD----GNPRLNLASFV-TTWMEPECDKLIMSSINKNYVDMD   88 (502)
T ss_dssp             CSCTTTSSGGGSCCCSSSCCSSCCCHHHHHHHHHHHGGGS----CCGGGBTTCCS-CCCCCHHHHHHHHHTTTCBTTCTT
T ss_pred             ccccccchhhhhhccCCCCCCCCCCHHHHHHHHHHHhccC----CCCCceecccc-CCCCCHHHHHHHHHHhccCCCChh
Confidence            4456778999999998 89999999999999999876432    467743 3322 233345688888899998888889


Q ss_pred             cChhhHHHHHHHHHHHHHhcCCC--CccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccC--CCCeEEEeCCCCc
Q 037144          110 SSPAAVELENIVMDWLGQMLDLP--KSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGREN--ISKLVVYSSDQTH  185 (502)
Q Consensus       110 ~~p~~~~le~~~~~~l~~l~g~~--~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~--~~~~~v~~s~~~H  185 (502)
                      .+|.+.++|+++++|+++++|++  .+.    ...|++|+|||+||++++.+++..+.++....|  ..++.|+++..+|
T Consensus        89 ~~p~~~~le~~~~~~la~l~g~~~~~~~----~~~g~~t~ggtea~~~a~~a~~~~~~~~~~~~G~~~~~~~vi~~~~~h  164 (502)
T 3hbx_A           89 EYPVTTELQNRCVNMIAHLFNAPLEEAE----TAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQ  164 (502)
T ss_dssp             TCHHHHHHHHHHHHHHHHHTTCCCCSSC----CCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEEETTCC
T ss_pred             cChhHHHHHHHHHHHHHHHhCCCccccc----CCcceecCcHHHHHHHHHHHHHHHHhHHHHhcCCCCCCcEEEEcCCch
Confidence            99999999999999999999998  221    125788999999999999988876544321111  2345899999999


Q ss_pred             hhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh---
Q 037144          186 CAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF---  262 (502)
Q Consensus       186 ~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~---  262 (502)
                      +++.++++++|+   .++.||+++ ++|.||+++|+++|+++      |.+|+++.++|++|.++|+++|+++|+++   
T Consensus       165 ~s~~~~~~~~G~---~~~~v~~~~-~~~~~d~~~l~~~i~~~------t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~  234 (502)
T 3hbx_A          165 VCWEKFARYFEV---ELKEVKLSE-GYYVMDPQQAVDMVDEN------TICVAAILGSTLNGEFEDVKLLNDLLVEKNKE  234 (502)
T ss_dssp             HHHHHHHHHTTC---EEEEECCBT-TBCSCCHHHHHHHCCTT------EEEEEEEBSCTTTCCBCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCc---eeEEEecCC-CcCcCCHHHHHHHHhhC------CEEEEEecCCCCCCcccCHHHHHHHHHHhhhc
Confidence            999999999999   999999975 34899999999999764      46899999999999999999999999999   


Q ss_pred             ---CCEEEeecccccccc--cCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCC
Q 037144          263 ---GIWVHVDAAYAGSAC--ICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATD  337 (502)
Q Consensus       263 ---g~~lhVDaA~g~~~~--~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~  337 (502)
                         |+|+|||+||+++..  ..+..+..+. +.++|++++++|||+++|.++|+++++++..+...+...+.|+....  
T Consensus       235 ~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~-~~~~D~v~~s~hK~l~~p~g~G~~~~~~~~~l~~~~~~~~~yl~~~~--  311 (502)
T 3hbx_A          235 TGWDTPIHVDAASGGFIAPFLYPELEWDFR-LPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQ--  311 (502)
T ss_dssp             HCCCCCEEEECTTGGGTHHHHCTTCCCSTT-STTEEEEEEETTTTTCCCSSCEEEEESSGGGSCGGGCEEECSSSSCE--
T ss_pred             cCCCCeEEEECCccchhhhhhCcccccccC-CCCceEEEECcccccCCCCCeEEEEEeCHHHhhHHhccCcccccCCC--
Confidence               999999999988764  2444433332 56899999999999999999999999988766555555567765432  


Q ss_pred             CCCcccccCCCcccccCCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-CCeeEEEEEee
Q 037144          338 QEPKEQEVGYKDWQITLCRRF-RSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP-RNFSLVCFRVT  415 (502)
Q Consensus       338 ~~~~~~~~~~~~~~~~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~-~~~~~v~f~~~  415 (502)
                                ..+++.++|+. .++++|++++.+|.+++.+++++..+++++|.+.|+++++|+++.+ +.+++++|++.
T Consensus       312 ----------~~~~~~~sr~~~~~~a~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~  381 (502)
T 3hbx_A          312 ----------PTFTLNFSKGSSQVIAQYYQLIRLGHEGYRNVMENCRENMIVLREGLEKTERFNIVSKDEGVPLVAFSLK  381 (502)
T ss_dssp             ----------EECCSCCSCBSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEECSCSSSSSEEEEEES
T ss_pred             ----------CCccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCCCceEEEEEec
Confidence                      12456677775 6789999999999999999999999999999999999988999876 78999999986


Q ss_pred             cCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEe---eeECCEEEEEEEecCCCCcHHHHHHHH
Q 037144          416 PSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTH---AIVGGIYVLRFAAGNSMTMESHVRAAW  492 (502)
Q Consensus       416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~---~~~~g~~~lR~~~~~~~t~~~di~~~~  492 (502)
                      +...                        .+  ...+.+.|.++|+++...   ....+..++|++++. .++++|+++++
T Consensus       382 ~~~~------------------------~~--~~~l~~~L~~~Gi~v~~~~~p~~~~~~~~lRisv~~-~~t~edid~li  434 (502)
T 3hbx_A          382 DSSC------------------------HT--EFEISDMLRRYGWIVPAYTMPPNAQHITVLRVVIRE-DFSRTLAERLV  434 (502)
T ss_dssp             SCSS------------------------CC--HHHHHHHHHTTTCBCCEEECCTTCTTCEEEEEECCT-TCCHHHHHHHH
T ss_pred             CCCc------------------------CC--HHHHHHHHHhCCcEEeeccCCcccCCceEEEEEeCC-CCCHHHHHHHH
Confidence            5310                        00  236788888889864322   223456899999874 46677999999


Q ss_pred             HHHHHHHHh
Q 037144          493 TVVQEHLEA  501 (502)
Q Consensus       493 ~~l~~~~~~  501 (502)
                      +.|+++.+.
T Consensus       435 ~~L~~~l~~  443 (502)
T 3hbx_A          435 IDIEKVMRE  443 (502)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999987653

>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.8e-40  Score=349.32  Aligned_cols=390  Identities=16%  Similarity=0.209  Sum_probs=301.3

Q ss_pred             CCCCCCCCCCCHHHHHHHHHHhhcC-CCCCCCCCcccccCCCC-CCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHH
Q 037144           45 LPESAPYSPESVETILQDVQEHIVP-GITHWQSPNYFAYFPAT-SSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVM  122 (502)
Q Consensus        45 ~~~~~p~~~~~~~~il~~~~~~~~~-~~~~~~~p~~~~~~~~~-~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~  122 (502)
                      ....+|++|.+.+++++++.+.... ....|.+|+|+|++..+ +.....+.+.+....+.+...|..+|+..++|+++.
T Consensus        34 ~~~~lp~~g~~~~~i~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  113 (497)
T 3mc6_A           34 NFPQLPSNGIPQDDVIEELNKLNDLIPHTQWKEGKVSGAVYHGGDDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEVV  113 (497)
T ss_dssp             CCSSCCSSCCCHHHHHHHHHHHHHSSCCCCGGGTCBSSSCSCCCHHHHHHHHHHHHHTSSCBTTCTTTCHHHHHHHHHHH
T ss_pred             cccCCCCCCCCHHHHHHHHHHHhhhcCCCCCCCCCEeeecCCCchHHHHHHHHHHHHHhhcCCCCcccChHHHHHHHHHH
Confidence            4467899999999999999987653 56788999999987544 344455566666666667778889999999999999


Q ss_pred             HHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCE
Q 037144          123 DWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNI  202 (502)
Q Consensus       123 ~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v  202 (502)
                      +|+++++|++...     ..+++++|||+|+.+++.+++++...+.   |.++++|+++..+|.++.++++.+|+   ++
T Consensus       114 ~~la~~~g~~~~~-----~~~~~~~ggt~a~~~a~~a~~~~~~~~~---g~~~~~Vi~~~~~h~~~~~~~~~~G~---~~  182 (497)
T 3mc6_A          114 SMVLRMFNAPSDT-----GCGTTTSGGTESLLLACLSAKMYALHHR---GITEPEIIAPVTAHAGFDKAAYYFGM---KL  182 (497)
T ss_dssp             HHHHHHTTCCTTT-----CCEEEESSHHHHHHHHHHHHHHHHHHHS---CCSSCEEEEETTSCHHHHHHHHHSCC---EE
T ss_pred             HHHHHHhCCCCCC-----CeEEEcCcHHHHHHHHHHHHHHHHHhcC---CCCCceEEEeCCccHHHHHHHHHcCC---eE
Confidence            9999999998211     2689999999999999999987644332   22457899999999999999999999   99


Q ss_pred             EEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccccccccc----
Q 037144          203 RAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACI----  278 (502)
Q Consensus       203 ~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~----  278 (502)
                      +.||+++ +++.+|+++|+++|+++      +.+|+++.++|++|.++|+++|+++|++||+|+|||+||+++...    
T Consensus       183 ~~v~~~~-~~~~~d~~~l~~~i~~~------~~~v~~~~p~nptG~~~~l~~i~~la~~~g~~livD~a~~~~~~~f~~~  255 (497)
T 3mc6_A          183 RHVELDP-TTYQVDLGKVKKFINKN------TVLLVGSAPNFPHGIADDIEGLGKIAQKYKLPLHVDSCLGSFIVSFMEK  255 (497)
T ss_dssp             EEECBCT-TTCSBCTTTTGGGCCSS------EEEEEEETTCTTTCCCCSCTTTTTHHHHTTCCEEEETTTTHHHHGGGTT
T ss_pred             EEEecCc-ccCcCCHHHHHHHHhhC------CEEEEEECCCCCCCcCCCHHHHHHHHHHhCCEEEEECcchhhhhhhhhh
Confidence            9999985 25799999999998643      568999999999999999999999999999999999999977553    


Q ss_pred             -----CccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCccccc
Q 037144          279 -----CPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQIT  353 (502)
Q Consensus       279 -----~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~  353 (502)
                           .+.+..   ...++|++++++|||+++|.++|+++++++......+...+.|....            +...++.
T Consensus       256 ~~~~~~~~~~~---~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~  320 (497)
T 3mc6_A          256 AGYKNLPLLDF---RVPGVTSISCDTHKYGFAPKGSSVIMYRNSDLRMHQYYVNPAWTGGL------------YGSPTLA  320 (497)
T ss_dssp             TTCCSCCCCST---TSTTCCEEEEETTTTTCCCSSCEEEECSSHHHHTTTSCCBTTCTTSC------------BCCSSSC
T ss_pred             hcccCCccccc---cCCCCcEEEECchhhcCCCCCceeEEecCHHHHhhhhcccccccCCC------------cCCcCcc
Confidence                 111211   12378999999999999999999999988754322222222222211            1122333


Q ss_pred             CCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCC
Q 037144          354 LCRRF-RSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTS-DKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGT  431 (502)
Q Consensus       354 ~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~-~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~  431 (502)
                      ++|.. ..+++|++++.++.+++.+++++..++++++++.|++ +|+++++.++..++++|+.....             
T Consensus       321 g~~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~~~~~v~~~~~~~~-------------  387 (497)
T 3mc6_A          321 GSRPGAIVVGCWATMVNMGENGYIESCQEIVGAAMKFKKYIQENIPDLDIMGNPRYSVISFSSKTLN-------------  387 (497)
T ss_dssp             SSCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCEECSCCCSSEEEEECTTTT-------------
T ss_pred             cCCcchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCCeeEEEEeCCCCC-------------
Confidence            33332 2457999999999999999999999999999999999 79999988888889998754211             


Q ss_pred             cccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          432 YDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       432 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                                      ..++.+.|.++|..+...   .....+|++++ . +++++++++++.|+++.++
T Consensus       388 ----------------~~~l~~~L~~~Gi~v~~~---~~~~~~ri~~~-~-~t~e~i~~~~~~L~~~l~~  436 (497)
T 3mc6_A          388 ----------------IHELSDRLSKKGWHFNAL---QKPVALHMAFT-R-LSAHVVDEICDILRTTVQE  436 (497)
T ss_dssp             ----------------HHHHHHHHHTTTCBCEEC---CSSCCEEEECC-T-TTTCTHHHHHHHHHHHHHH
T ss_pred             ----------------HHHHHHHHHhCCEEEecC---CCCCeEEEEEe-C-CCHHHHHHHHHHHHHHHHH
Confidence                            346778888888743221   22336899987 3 5667999999999987653

>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*

Probab=100.00  E-value=7.6e-40  Score=345.93  Aligned_cols=387  Identities=17%  Similarity=0.162  Sum_probs=306.4

Q ss_pred             CCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCcccccCCC-CCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHH
Q 037144           47 ESAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYFPA-TSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWL  125 (502)
Q Consensus        47 ~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l  125 (502)
                      ..+|++|.+.+++++++.+.+.++...|.+++|+|++.. .+.++..+.+.+....+.+...|..+|...++|.++++|+
T Consensus        69 ~~lp~~g~~~~~i~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~le~~l~~~l  148 (514)
T 3mad_A           69 ARLPRAGLPRAEILAEIAAMGAAESPAWRDGYASGAVYHGDEHHIAFLNEVYALQSQSNPLHPDLWPSTAKFEAEVVAMT  148 (514)
T ss_dssp             SSCCSSCCCHHHHHHHHHHHHHHHHHHHHTTCBSSSCSCCCHHHHHHHHHHHHHHTTCCTTCTTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHHHhccCCCCCCCceEEEecCCCCCHHHHHHHHHHHHhhcCCcccccChHHHHHHHHHHHHH
Confidence            568999999999999999988888888999999999764 4566778888888888888888889999999999999999


Q ss_pred             HHhcCCCC---ccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCE
Q 037144          126 GQMLDLPK---SFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNI  202 (502)
Q Consensus       126 ~~l~g~~~---~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v  202 (502)
                      ++++|++.   ..      .|++|+|||+|+..++.+++....++.   |.++++|+++..+|.++.++++.+|+   ++
T Consensus       149 a~~~g~~~~~~~v------~~~~t~ggt~a~~~al~a~~~~g~~~~---g~~~d~Vi~~~~~~~~~~~~~~~~G~---~v  216 (514)
T 3mad_A          149 AHMLGGDAAGGTV------CGTVTSGGTESLLLAMKTYRDWARATK---GITAPEAVVPVSAHAAFDKAAQYFGI---KL  216 (514)
T ss_dssp             HHHTTGGGGTSCC------EEEEESSHHHHHHHHHHHHHHHHHHHH---CCSSCEEEEETTSCTHHHHHHHHHTC---EE
T ss_pred             HHHcCCCCccCCc------ceEEcCcHHHHHHHHHHHHHHHhhhhc---CCCCCeEEEeCccchHHHHHHHHcCC---ee
Confidence            99999973   32      569999999999999999987643322   23457899999999999999999999   99


Q ss_pred             EEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccccccccc----
Q 037144          203 RAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACI----  278 (502)
Q Consensus       203 ~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~----  278 (502)
                      +.||+++  +|.+|+++|+++|+++      +.+|+++.++|++|.++|+++|+++|++||+|+|+|+||+++.+.    
T Consensus       217 ~~v~~~~--~~~~d~~~Le~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~la~~~~i~livDea~~~~~~~~~~~  288 (514)
T 3mad_A          217 VRTPLDA--DYRADVAAMREAITPN------TVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACLGGFILPWAER  288 (514)
T ss_dssp             EEECBCT--TSCBCHHHHHHHCCTT------EEEEEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTTTTHHHHHH
T ss_pred             EEeeeCC--CCCCCHHHHHHHhccC------CEEEEEeCCCCCCccccCHHHHHHHHHHhCCeEEEecccccccchhHHh
Confidence            9999986  5799999999999653      458999999999999999999999999999999999999987653    


Q ss_pred             ----CccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccC
Q 037144          279 ----CPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITL  354 (502)
Q Consensus       279 ----~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~  354 (502)
                          .+.+..   ...++|++++++||++++|.++|+++++++......+.....|...            .+...++.+
T Consensus       289 ~g~~~~~~~~---~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~g  353 (514)
T 3mad_A          289 LGYPVPPFDF---RLEGVTSVSADTHKYGYGAKGTSVILYRRPDLLHYQYFIAADWPGG------------LYFSPTFAG  353 (514)
T ss_dssp             TTCCCCCCST---TSTTCCEEEECTTTTTCCCSSCEEEEESSHHHHTTTCEEESSCTTC------------SEEESSSCS
T ss_pred             cCCCCCcccc---cCCCCcEEEECchhccCCCCCeEEEEEeCHHHhccccccccccCCC------------cccCCccCC
Confidence                111211   2347899999999999999999999998876543221111112111            011223444


Q ss_pred             CCCCC-chHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcc
Q 037144          355 CRRFR-SLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYD  433 (502)
Q Consensus       355 sr~~~-al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~  433 (502)
                      ++... .+++|++++.++.+++++++++..++++++.+.|+++++++++.++ .++++|......               
T Consensus       354 s~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~-~~~~~~~~~~~~---------------  417 (514)
T 3mad_A          354 SRPGALSATAWAAMLSLGEEGYLDATRRILQAADRLKAGVRAIPSLKILGDP-LWVIAVASDELN---------------  417 (514)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCEESSCC-SSEEEEECSSSC---------------
T ss_pred             CCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCC-eEEEEEeCCCCC---------------
Confidence            55433 4789999999999999999999999999999999999999988655 456666543211               


Q ss_pred             cccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          434 QYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       434 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                                    ..++.++|.++|..+ .+  ......+|+++++.++++++|+++++.|+++.++
T Consensus       418 --------------~~~l~~~L~~~Gi~v-~g--~~~~~~~Ri~~~~~~~~~e~i~~~l~~L~~~l~~  468 (514)
T 3mad_A          418 --------------IYQVMEEMAGRGWRL-NG--LHRPPAFHVALTLRHTEPGVVDRFLADLQDAVAQ  468 (514)
T ss_dssp             --------------HHHHHHHHHTTTCBC-EE--ETTTTEEEEECCGGGGSTTHHHHHHHHHHHHHHH
T ss_pred             --------------HHHHHHHHHhcCCEe-cc--CCCCCeEEEEEecCCCCHHHHHHHHHHHHHHHHH
Confidence                          246778888888754 22  2323579999988888888999999999987653

>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*

Probab=100.00  E-value=3.1e-37  Score=313.31  Aligned_cols=305  Identities=12%  Similarity=0.089  Sum_probs=235.3

Q ss_pred             CCCCCCCCCHHHHHHHHHHhhcCCCCCCC-----------------CCcccccCCCCCCHHHHHHHHHHhhcCCCCcccc
Q 037144           47 ESAPYSPESVETILQDVQEHIVPGITHWQ-----------------SPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWI  109 (502)
Q Consensus        47 ~~~p~~~~~~~~il~~~~~~~~~~~~~~~-----------------~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~  109 (502)
                      ..+|++|.+.++|...|.+.-.-..++|.                 .||||||+++.    +..+|++..    +. .|.
T Consensus        21 ~~~p~~g~~~~~i~~~l~~~~~~d~~~~~~~~~~geregrv~~~~~~~r~~g~~hg~----~~~~d~l~~----~~-~~~   91 (450)
T 3bc8_A           21 GKCPEDGWDESTLELFLHELAVMDSNNFLGNCGVGEREGRVASALVARRHYRFIHGI----GRSGDISAV----QP-KAA   91 (450)
T ss_dssp             CCCCSSCCCHHHHHHHHHHHHHTBGGGCTTCCCCSSCCCCCSCHHHHHHTTTCCSCB----CC-----------CC-SBH
T ss_pred             ccCCccCCCHHHHHHHHHHHhhCCCCccccccccCcccceEecccccCCccceecch----hHHHHHHHh----Cc-ccc
Confidence            46899999999999888876444444553                 17999999876    345577666    33 788


Q ss_pred             cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCch-HHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhH
Q 037144          110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTC-EALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAF  188 (502)
Q Consensus       110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt-~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~  188 (502)
                      .+|+...+|+.+..|+.+++|+|..+      ++++++|+| +++.+++.++|+...        +++.|+++..+|.|+
T Consensus        92 ~~~~~~~~e~~~~~~~~~~lGlp~~~------~~~lV~GaT~~~~a~~L~aar~~~~--------~~~~viv~r~aHkSv  157 (450)
T 3bc8_A           92 GSSLLNKITNSLVLNVIKLAGVHSVA------SCFVVPMATGMSLTLCFLTLRHKRP--------KAKYIIWPRIDQKSC  157 (450)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCTTCC------EEEEESSCHHHHHHHHHHHHHHHCT--------TCCEEEEECCCCHHH
T ss_pred             CCcHHHHHHHHHHHHHHHhCCCCCCc------eEEEECCHHHHHHHHHHHHcchhhc--------CCCEEEEECCcHHHH
Confidence            89999999999999999999999875      678999998 778888888876310        235667778899999


Q ss_pred             HHHHHHcCCCCCCEEEEecCC-CCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEE
Q 037144          189 QKAAQIVGIDRKNIRAIKTTK-SSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVH  267 (502)
Q Consensus       189 ~~aa~~~Glg~~~v~~v~~~~-~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lh  267 (502)
                      .+++.++|+   ..+.|+... ++.+.||+++|+++|+++..  ..+++|+.+.+++.+|.+|||++|+++|++||+|+|
T Consensus       158 ~kAl~l~Gl---~p~~v~~~~~~~~~~id~~~le~aI~~~~~--~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~  232 (450)
T 3bc8_A          158 FKSMVTAGF---EPVVIENVLEGDELRTDLKAVEAKIQELGP--EHILCLHSTTACFAPRVPDRLEELAVICANYDIPHV  232 (450)
T ss_dssp             HHHHHHTTC---EEEEECCEEETTEEECCHHHHHHHHHHHCG--GGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEE
T ss_pred             HHHHHHcCC---eeEEEEeeecCccCCcCHHHHHHHHHhcCC--CCEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEE
Confidence            999999999   777775521 23689999999999988642  146788888787778899999999999999999999


Q ss_pred             eecccccccccCccchhhhcCC--CCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCccccc
Q 037144          268 VDAAYAGSACICPEFRHFIDGV--ECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEV  345 (502)
Q Consensus       268 VDaA~g~~~~~~~~~~~~~~~~--~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~  345 (502)
                      ||+|||+...+.++..  ..++  ++||+++.|+|||+++|.+++++++|++..+....   ..|.....          
T Consensus       233 VD~A~G~~~~~~~~l~--~~a~~~~~AD~~v~S~HK~l~a~~~~~~l~~rd~~~~~~~~---~~~~g~~s----------  297 (450)
T 3bc8_A          233 VNNAYGLQSSKCMHLI--QQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNEPFIQDIS---KMYPGRAS----------  297 (450)
T ss_dssp             EECTTTTTCHHHHHHH--HHHHHHSCCCEEEEEHHHHHSCCSSCEEEEESCHHHHHHHH---HHSCSCBC----------
T ss_pred             EECCCchhhhhhHhHH--HHHhcccCCCEEEECCccCCCchhccEEEEecCHHHHHHHH---HHhhcCCc----------
Confidence            9999998765432211  0223  58999999999999999999999999887654332   22332110          


Q ss_pred             CCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEecCC
Q 037144          346 GYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK---RFEVAFPR  405 (502)
Q Consensus       346 ~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~---~~~l~~~~  405 (502)
                               +  ..++++|.++..+|.+++++.+++..++++++++.|++++   ++.++..+
T Consensus       298 ---------~--SpsL~l~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~g~~~l~~~  349 (450)
T 3bc8_A          298 ---------A--SPSLDVLITLLSLGCSGYRKLLKERKEMFVYLSTQLKKLAEAHNERLLQTP  349 (450)
T ss_dssp             ---------S--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCT
T ss_pred             ---------c--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhcCceecCCc
Confidence                     0  1358999999999999999999999999999999999988   88887644

>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}

Probab=100.00  E-value=1.7e-35  Score=301.11  Aligned_cols=381  Identities=18%  Similarity=0.204  Sum_probs=290.4

Q ss_pred             CCCCCCCCHHHHHHHHHHhhcCCCCCCCCCcccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHH
Q 037144           48 SAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQ  127 (502)
Q Consensus        48 ~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~  127 (502)
                      .+|+.|.+.+++++++.+.. +...+|.+|.|+++..+++. | .+.+.+...+..+...+...|...+++.++.+++++
T Consensus         4 ~lp~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~-~-~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~   80 (397)
T 3f9t_A            4 NMQEKGVSEKEILEELKKYR-SLDLKYEDGNIFGSMCSNVL-P-ITRKIVDIFLETNLGDPGLFKGTKLLEEKAVALLGS   80 (397)
T ss_dssp             SCCSSCCCHHHHHHHHHHHH-TTSCCGGGTCBCSCSCCCCC-T-HHHHHHHHHTTCCTTSGGGBHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCCCHHHHHHHHHHhh-ccCCCCCCCCeEEEecCCCc-H-HHHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHH
Confidence            57899999999999999864 66677888999999866544 3 346666666665544455667889999999999999


Q ss_pred             hcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHH--hCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEE
Q 037144          128 MLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKK--IGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAI  205 (502)
Q Consensus       128 l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~--~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v  205 (502)
                      ++|.+..       .+++|+|||+|+..++.+++..+...  .+....+++.|+++..+|+++.++++.+|+   +++.+
T Consensus        81 ~~~~~~~-------~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~---~~~~v  150 (397)
T 3f9t_A           81 LLNNKDA-------YGHIVSGGTEANLMALRCIKNIWREKRRKGLSKNEHPKIIVPITAHFSFEKGREMMDL---EYIYA  150 (397)
T ss_dssp             HTTCTTC-------EEEEESCHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCEEEEETTCCTHHHHHHHHHTC---EEEEE
T ss_pred             HhCCCCC-------CEEEecCcHHHHHHHHHHHHHHHHhhhhhcccCCCCeEEEECCcchhHHHHHHHHcCc---eeEEE
Confidence            9999764       58999999999999999887653211  111122578899999999999999999999   99999


Q ss_pred             ecCCCCCcccCHHHHHHHHHH-HHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchh
Q 037144          206 KTTKSSSYGLSAESVLSQINL-DVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRH  284 (502)
Q Consensus       206 ~~~~~~~~~~d~~~Le~~i~~-~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~  284 (502)
                      |+++  ++.+|+++|+++|++ ++      .+|+++.++|++|.+.|+++|.++|++||+|+|+|++|+++.+.......
T Consensus       151 ~~~~--~~~~d~~~l~~~i~~~~~------~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~  222 (397)
T 3f9t_A          151 PIKE--DYTIDEKFVKDAVEDYDV------DGIIGIAGTTELGTIDNIEELSKIAKENNIYIHVDAAFGGLVIPFLDDKY  222 (397)
T ss_dssp             CBCT--TSSBCHHHHHHHHHHSCC------CEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGG
T ss_pred             eeCC--CCcCCHHHHHHHHhhcCC------eEEEEECCCCCCCCCCCHHHHHHHHHHhCCeEEEEccccchhhhhccccc
Confidence            9985  579999999999987 33      47888899999999999999999999999999999999887653221100


Q ss_pred             -------hhc-CCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCC
Q 037144          285 -------FID-GVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCR  356 (502)
Q Consensus       285 -------~~~-~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr  356 (502)
                             .+. .. ++|++++++||+++.|.++|+++++++... +.+....+|+....             .....+++
T Consensus       223 ~~~~~~~~~~~~~-~~~~~~~s~~K~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~-------------~~~~~~~~  287 (397)
T 3f9t_A          223 KKKGVNYKFDFSL-GVDSITIDPHKMGHCPIPSGGILFKDIGYK-RYLDVDAPYLTETR-------------QATILGTR  287 (397)
T ss_dssp             CCTTCCCCCSGGG-TCSEEECCTTTTTCCCSSCEEEEESSGGGG-GGTCEECTTSSSSE-------------ECSSCSSC
T ss_pred             ccccccccccccc-cCCeEEEccccccCCCCCceEEEEeCHHHH-HhhccCCccccCCC-------------cccccccc
Confidence                   000 12 689999999999999999999999877543 23322234443211             11222333


Q ss_pred             C-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccc
Q 037144          357 R-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQY  435 (502)
Q Consensus       357 ~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~  435 (502)
                      . ...+.+|++++.++..++.+++++..++++++.+.|+++ +++++.++..++++|....                   
T Consensus       288 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~-------------------  347 (397)
T 3f9t_A          288 VGFGGACTYAVLRYLGREGQRKIVNECMENTLYLYKKLKEN-NFKPVIEPILNIVAIEDED-------------------  347 (397)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCCSSSEEEEECTT-------------------
T ss_pred             ccchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEEcCCCccEEEEEeCC-------------------
Confidence            3 245788889988888999999999999999999999998 8887777888888876532                   


Q ss_pred             cccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144          436 RQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       436 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~  500 (502)
                                  ..++.+.+.++|..+ .+..  ...++|++++ ..+++++++++++.|+++.+
T Consensus       348 ------------~~~~~~~l~~~gi~v-~~~~--~~~~~Ri~~~-~~~~~e~i~~~~~~l~~~l~  396 (397)
T 3f9t_A          348 ------------YKEVCKKLRDRGIYV-SVCN--CVKALRIVVM-PHIKREHIDNFIEILNSIKR  396 (397)
T ss_dssp             ------------HHHHHHHHHHTTCBC-EECS--SSSEEEEECC-TTCCHHHHHHHHHHHHHHC-
T ss_pred             ------------HHHHHHHHHhCCeEE-eccC--CCCEEEEEEc-CCCCHHHHHHHHHHHHHhhC
Confidence                        245677777778643 3321  2468999986 55678899999999998754

>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9

Probab=100.00  E-value=8.4e-37  Score=317.65  Aligned_cols=396  Identities=12%  Similarity=0.093  Sum_probs=276.3

Q ss_pred             cCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHhhcCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCcccccC
Q 037144            4 AYAQEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYF   83 (502)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~   83 (502)
                      +-++.|.+.+++++....++++++-.                ...+|++|.+.+++.+.+.+......     ..|+++.
T Consensus        29 ~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~lp~~g~~~~~i~~~~~~~~~~~~-----~~yld~a   87 (456)
T 2z67_A           29 LIPKNMEKRGELVLNEYLKEIEDVFN----------------HRKIPENGIDDEKIKLFLKFLSMMDT-----DKDPKSV   87 (456)
T ss_dssp             SSCHHHHHHHHHHHHHHTHHHHHHHH----------------HCSCCSSCCCHHHHHHHHHHHHTTBG-----GGCTTCE
T ss_pred             cCcHHHHHHHHHHHHHHHHHHHHhhc----------------cCCCCCCCCCHHHHHHHHHHHHhccc-----ccccccc
Confidence            33567888888887776666654321                13468889999888887776543221     2355544


Q ss_pred             CCCCCHHHHHHHHHHh----hcC----------CCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCc
Q 037144           84 PATSSVAGIVGEMLSS----GFN----------VVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTT  149 (502)
Q Consensus        84 ~~~~~~~~~~~~~l~~----~~n----------~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~gg  149 (502)
                      ..++.++.++..+...    .++          .+. .|..+|.+.++++++++|+++++|++.        .+++|+||
T Consensus        88 a~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~la~~~g~~~--------~~~~t~g~  158 (456)
T 2z67_A           88 RIGEREARTYSKIHEELSSGFCHGIGRSGNLVDPQP-KASGASIMYALTNKILESFFKQLGLNV--------HAIATPIS  158 (456)
T ss_dssp             ECSSCCCCCSCHHHHHHTTTCTTCBSBTTBTTSCCT-TBHHHHHHHHHHHHHHHHHHHHTTCCC--------EEEEESSC
T ss_pred             ccccccccccccccCccccccCCCccHHHHHHhhCc-ccccCcHHHHHHHHHHHHHHHHcCCCC--------CEEEeCcH
Confidence            3333333222222111    111          122 456677789999999999999999975        27999999


Q ss_pred             h-HHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCC-CCCcccCHHHHHHHHHHH
Q 037144          150 C-EALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTK-SSSYGLSAESVLSQINLD  227 (502)
Q Consensus       150 t-~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~-~~~~~~d~~~Le~~i~~~  227 (502)
                      | ++|+.++.+++...         ++.+|+++...|+|+.++++..|+   +++.+++.+ +++|.+|+++|+++|++.
T Consensus       159 te~a~~~al~~~~~~~---------~~~~vi~~~~~h~s~~~~~~~~G~---~~~~v~~~~~~~~~~~d~~~l~~~i~~~  226 (456)
T 2z67_A          159 TGMSISLCLSAARKKY---------GSNVVIYPYASHKSPIKAVSFVGM---NMRLVETVLDGDRVYVPVEDIENAIKKE  226 (456)
T ss_dssp             HHHHHHHHHHHHHHHH---------CCCEEEEECCCCHHHHHHHHHTTC---EEEEECCEEETTEEECCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhc---------CCCEEEEECCCcHHHHHHHHHcCC---CceEEEEeccCCCCCcCHHHHHHHHHHH
Confidence            9 67777877765521         345667677799999999999999   999988732 236899999999999432


Q ss_pred             HhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccc-cCccchhhhcCCCCCCeeEEccCCcCCCC
Q 037144          228 VEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSAC-ICPEFRHFIDGVECVDSFSFNPHKWLFTT  306 (502)
Q Consensus       228 ~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~-~~~~~~~~~~~~~~aDsi~~~~hK~l~~p  306 (502)
                      ..++ .+++|+.+.++|++|.++|+++|+++|+++|+|+|||+||++... ..+.....+.+  ++|++++++|||+++|
T Consensus       227 ~~~~-~~~~vv~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~~~g~~~~~~~~~~~--~~D~~~~s~hK~~~~p  303 (456)
T 2z67_A          227 IELG-NRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFKY--RVDAVVSSSDKNLLTP  303 (456)
T ss_dssp             HHTT-CCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHTS--CCSEEEEEHHHHHCCC
T ss_pred             hhCC-CeEEEEEeCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcchHHHHHhhHHHHHhhCC--CCCEEEEcCCCCcCCC
Confidence            2122 467888899999999999999999999999999999999987765 22332222333  7999999999999999


Q ss_pred             CcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHH
Q 037144          307 LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMA  386 (502)
Q Consensus       307 ~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la  386 (502)
                      .++|++++|++..+.. +  .+.|.....                     ...++++|+++..+|.++++++.++..+++
T Consensus       304 ~g~G~l~~~~~~~~~~-l--~~~~~g~~~---------------------~~~~~~~~aal~~l~~~~~~~~~~~~~~~~  359 (456)
T 2z67_A          304 IGGGLVYSTDAEFIKE-I--SLSYPGRAS---------------------ATPVVNTLVSLLSMGSKNYLELVKNQKNSK  359 (456)
T ss_dssp             SSCEEEEESCHHHHHH-H--HTTSCSCBC---------------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCeEEEEEcCHHHHhh-c--CcCCCCCCC---------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999987655432 2  223332100                     012678999999999999999999999999


Q ss_pred             HHHHHHHhcCC---CeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcE--
Q 037144          387 KLFERLVTSDK---RFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKV--  461 (502)
Q Consensus       387 ~~l~~~l~~~~---~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~--  461 (502)
                      +++.+.|++++   |+.++ ++. ++++|.+....                          .  ..++.++|.++|..  
T Consensus       360 ~~l~~~L~~~~~~~g~~v~-~~~-~~v~~~~~~~~--------------------------~--~~~l~~~L~~~gi~~~  409 (456)
T 2z67_A          360 KLLDELLNDLSKKTGGKFL-DVE-SPIASCISVNS--------------------------D--PVEIAAKLYNLRVTGP  409 (456)
T ss_dssp             HHHHHHHHHHHHHSSCCBC-CCC-CSSEEEEECSS--------------------------C--HHHHHHHHHHTTEESC
T ss_pred             HHHHHHHHhcccccCCEec-CCC-CeEEEEEeccc--------------------------H--HHHHHHHHHHcCCCcc
Confidence            99999999886   77665 444 88888773221                          0  23456666666631  


Q ss_pred             EEE-------ee--eECCEEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144          462 FMT-------HA--IVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHL  499 (502)
Q Consensus       462 ~~~-------~~--~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~  499 (502)
                      -+.       +.  ......++|++++ ..++++|||+++++|+++.
T Consensus       410 rv~~~~g~f~G~~~~~~~~~~vr~s~~-~~~t~eeid~~l~~L~~~~  455 (456)
T 2z67_A          410 RGIKKTDHFGNCYLGTYTHDYIVMNAA-IGVRTEDIVNSVSKLEKIL  455 (456)
T ss_dssp             EEECTTCHHHHTCSSCCSCCEEEEECC-TTCCHHHHHHHHHHHHTC-
T ss_pred             eEEeecCccccccccccCcchhhhhhh-cCCCHHHHHHHHHHHHHHh
Confidence            111       00  0112468999975 5677889999999998754

>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*

Probab=100.00  E-value=9.6e-31  Score=273.30  Aligned_cols=393  Identities=12%  Similarity=0.081  Sum_probs=264.4

Q ss_pred             chhHhhcCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCcccccCCCCCCHHHHHHHHHHhhcCCCCcccc-cChhhHH
Q 037144           38 PGYLKKRLPESAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWI-SSPAAVE  116 (502)
Q Consensus        38 ~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~-~~p~~~~  116 (502)
                      |+.++...+..+|  +.+..++++++.+....+...+.+..|+| .......|.++.++.....+-+..... .+++..+
T Consensus        31 p~~~~~~~~~~lp--~~~e~~~~~~~~~l~~~~~~~~~~~~~lg-~~~~~~~p~v~~~~~~~~~~~~~~~~~~~~~g~~~  107 (474)
T 1wyu_B           31 PKEHLREVPPRLP--EVDELTLVRHYTGLSRRQVGVDTTFYPLG-SCTMKYNPKLHEEAARLFADLHPYQDPRTAQGALR  107 (474)
T ss_dssp             CGGGBCSSCCCCC--CCCHHHHHHHHHHHHTTCCCTTTSCCCBT-TTCCCCCCHHHHHHHHTTSSCCTTSCGGGCHHHHH
T ss_pred             CHHHhccCCCCCC--CCCHHHHHHHHHHHHhCCCCcccCccccc-cccccCCHHHHHHHHHHHHhcCCCCchhhChHHHH
Confidence            4555544455688  79999999999988766655455667777 333344456555555442222222222 5788899


Q ss_pred             HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcC
Q 037144          117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVG  196 (502)
Q Consensus       117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~G  196 (502)
                      ++.++.+|+++++|++.        ..++|+|||+|+..++.+++.....+ |. ..++..|+++...|.++.++++..|
T Consensus       108 l~~~l~~~la~~~g~~~--------~~~~~~ggt~a~~~al~~~~~~~~~~-Gd-~~~r~~Vlv~~~~h~~~~~~~~~~G  177 (474)
T 1wyu_B          108 LMWELGEYLKALTGMDA--------ITLEPAAGAHGELTGILIIRAYHEDR-GE-GRTRRVVLVPDSAHGSNPATASMAG  177 (474)
T ss_dssp             HHHHHHHHHHHHHTCSE--------EECCCSSHHHHHHHHHHHHHHHHHHT-TC-TTTCCEEEEETTSCTHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHCCCc--------eeecChHHHHHHHHHHHHHHHHHHhc-CC-ccCCCEEEEeCCcChhhHHHHHHCC
Confidence            99999999999999874        35788999999999998887643321 10 0123478889999999999999999


Q ss_pred             CCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc-CChhHHHHHHHHhCCEEEeecccccc
Q 037144          197 IDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV-DPLKPLCDVAKQFGIWVHVDAAYAGS  275 (502)
Q Consensus       197 lg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i-dpl~eI~~i~~~~g~~lhVDaA~g~~  275 (502)
                      +   +++.||+++  +|.+|+++|+++|++++      .+|+++.++ ++|.+ +|+++|+++|++||+|+|+|++|+.+
T Consensus       178 ~---~vv~v~~~~--~~~~d~~~L~~~i~~~t------~~v~~~~pn-~~G~~~~~l~~i~~l~~~~g~~li~Dea~~~~  245 (474)
T 1wyu_B          178 Y---QVREIPSGP--EGEVDLEALKRELGPHV------AALMLTNPN-TLGLFERRILEISRLCKEAGVQLYYDGANLNA  245 (474)
T ss_dssp             C---EEEEECBCT--TSSBCHHHHHHHCSTTE------EEEEECSSC-TTSCCCTTHHHHHHHHHHHTCEEEEEGGGGGG
T ss_pred             C---EEEEecCCC--CCCcCHHHHHHhhCCCc------eEEEEECCC-CCcccCCCHHHHHHHHHHcCCEEEEeCchhhh
Confidence            9   999999975  57999999999996543      377778774 69999 89999999999999999999999765


Q ss_pred             cccCccchhhhcCCCCCCeeEEccCCcCCCCC-----cceEEEeeCchhhhhhhcCC------cccccCccCCCCCcccc
Q 037144          276 ACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-----DCCCLWVKDPSCLLSTLSTN------PQYLKNEATDQEPKEQE  344 (502)
Q Consensus       276 ~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-----~~g~~~~r~~~~l~~~~~~~------~~yl~~~~~~~~~~~~~  344 (502)
                      .+..-.....     ++|++++++||++++|.     ++|++++++.. + +.+...      ..|.......     ..
T Consensus       246 ~~g~~~~~~~-----g~di~~~s~~K~~~~p~g~gG~~~G~~~~~~~l-~-~~l~~~~~~~~g~~~~~~~~~~-----~~  313 (474)
T 1wyu_B          246 IMGWARPGDM-----GFDVVHLNLHKTFTVPHGGGGPGSGPVGVKAHL-A-PYLPVPLVERGEEGFYLDFDRP-----KS  313 (474)
T ss_dssp             TTTTCCHHHH-----TCSEEECCTTTTTCCCCTTSCCCCCCEEECGGG-G-GGCCSCEEEECSSCEEEECCCT-----TC
T ss_pred             hccCCCcccC-----CCcEEEEeCccccccCCCCCCCCeEEEEEcHHH-H-HhCCCCeeeccCCeeEecccCc-----cc
Confidence            5311111111     68999999999999985     68999987642 2 222110      0111000000     00


Q ss_pred             cCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-CeeEEEEEeecCcchhhh
Q 037144          345 VGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR-NFSLVCFRVTPSAVMDKL  423 (502)
Q Consensus       345 ~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~-~~~~v~f~~~~~~~~~~~  423 (502)
                        ...+...+.......++|..++.+|.+++++..++..++++++.+.|++. ++++..++ .+..+++.+ +.+.    
T Consensus       314 --~~~~~~~~~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~-~~~~----  385 (474)
T 1wyu_B          314 --IGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKEK-GYRVPYDGPSMHEFVAQP-PEGF----  385 (474)
T ss_dssp             --CCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCBCSSCSSCCSCEEEBC-STTC----
T ss_pred             --CcccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcEecCCCCcceEEEEEc-CCCC----
Confidence              00000001111223466777777789999999999999999999999987 88874332 232233333 2110    


Q ss_pred             hhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC--CEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144          424 RTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG--GIYVLRFAAGNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~  500 (502)
                                             ...++.++|.++|... ....+.  ...++|++++. .++++++++++++|+++.+
T Consensus       386 -----------------------~~~~l~~~L~~~Gi~~-~~~~~~~~~~~~lRis~~~-~~t~e~id~~~~~L~~~~~  439 (474)
T 1wyu_B          386 -----------------------RALDLAKGLLELGFHP-PTVYFPLIVKEALMVEPTE-TEAKETLEAFAEAMGALLK  439 (474)
T ss_dssp             -----------------------CHHHHHHHHHHTTCCC-CEESCSTTSTTCEEECCCT-TSCHHHHHHHHHHHHHHHT
T ss_pred             -----------------------CHHHHHHHHHHCCccc-cccccccccCCEEEEEeec-CCCHHHHHHHHHHHHHHHH
Confidence                                   0245677777778752 221121  24689999864 4567799999999998764

>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}

Probab=99.97  E-value=4.3e-29  Score=255.51  Aligned_cols=359  Identities=13%  Similarity=0.028  Sum_probs=246.1

Q ss_pred             CCCcccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHH
Q 037144           75 QSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALL  154 (502)
Q Consensus        75 ~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~  154 (502)
                      .+|.++-+.+++..++..+.+.+...+   ...  .++....+..++.+++++++|.+...      ..++++||++|+.
T Consensus        10 ~~~~~~~~~pgp~~~~~~v~~a~~~~~---~~~--~~~~~~~~~~~~~~~la~~~~~~~~~------~v~~~~sgt~al~   78 (411)
T 3nnk_A           10 NPPSRLLMGPGPINADPRVLRAMSSQL---IGQ--YDPAMTHYMNEVMALYRGVFRTENRW------TMLVDGTSRAGIE   78 (411)
T ss_dssp             CCCCCEEESSSCCCCCHHHHHHHTSCC---CCT--TCHHHHHHHHHHHHHHHHHHTCCCSE------EEEEESCHHHHHH
T ss_pred             CCccceeecCCCCCCCHHHHHHhhccc---ccc--ccHHHHHHHHHHHHHHHHHhCCCCCc------EEEECCCcHHHHH
Confidence            467777777777666666666655432   111  24666678889999999999997642      3688899999998


Q ss_pred             HHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh--HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCC
Q 037144          155 CTLTAARDRVLKKIGRENISKLVVYSSDQTHCA--FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAEL  232 (502)
Q Consensus       155 ~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s--~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~  232 (502)
                      .++.+...           +++.|+++..+|++  +..+++..|+   +++.+|++.  ++.+|+++|+++|++..    
T Consensus        79 ~~~~~~~~-----------~gd~Vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~~----  138 (411)
T 3nnk_A           79 AILVSAIR-----------PGDKVLVPVFGRFGHLLCEIARRCRA---EVHTIEVPW--GEVFTPDQVEDAVKRIR----  138 (411)
T ss_dssp             HHHHHHCC-----------TTCEEEEEECSHHHHHHHHHHHHTTC---EEEEEECCT--TCCCCHHHHHHHHHHHC----
T ss_pred             HHHHHhcC-----------CCCEEEEecCCchHHHHHHHHHHcCC---eEEEEecCC--CCCCCHHHHHHHHhhCC----
Confidence            88776632           67788889999988  8889999999   999999975  56899999999998631    


Q ss_pred             ccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEE
Q 037144          233 IPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCL  312 (502)
Q Consensus       233 ~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~  312 (502)
                       +.+|+++.++|++|.+.|+++|+++|++||+|+|+|++++.+....+. ..     .++|++++++|||+++|.++|++
T Consensus       139 -~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~-~~-----~~~d~~~~s~~K~l~~~~g~g~~  211 (411)
T 3nnk_A          139 -PRLLLTVQGDTSTTMLQPLAELGEICRRYDALFYTDATASLGGNPLET-DV-----WGLDAVSAGMQKCLGGPSGTSPI  211 (411)
T ss_dssp             -CSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTBTTBCCCT-TT-----TTCSEEECCSTTTTCCCSSEEEE
T ss_pred             -CeEEEEeCCCCCcceeccHHHHHHHHHHcCCEEEEECCcccCCcccch-hc-----cCCcEEEecCccccCCCCceEEE
Confidence             348888999999999999999999999999999999998776543321 11     16899999999999889899999


Q ss_pred             EeeCchhhhhhhcC---CcccccCccCC---CCCcccccCCC-------ccccc-CCCC-CCchHHHHHHHHhcHHHHHH
Q 037144          313 WVKDPSCLLSTLST---NPQYLKNEATD---QEPKEQEVGYK-------DWQIT-LCRR-FRSLKLWVVIRNFGVANLRN  377 (502)
Q Consensus       313 ~~r~~~~l~~~~~~---~~~yl~~~~~~---~~~~~~~~~~~-------~~~~~-~sr~-~~al~~~~~l~~~g~~g~~~  377 (502)
                      ++++.. .......   .+.|.......   ........+..       ..... .+.. .....+..+++.+..+|+++
T Consensus       212 ~~~~~~-~~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~  290 (411)
T 3nnk_A          212 TLSARM-EEAIRRRKCVEEGIRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLILQEGLDY  290 (411)
T ss_dssp             EECHHH-HHHHHTTCCCCGGGCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHH
T ss_pred             EECHHH-HHHHhhcccccccccccccccccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHhhHHH
Confidence            886542 2211111   11222111000   00000000000       00000 1111 12234556666666677899


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCeEEecCCC---eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHH
Q 037144          378 FIRSHVGMAKLFERLVTSDKRFEVAFPRN---FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLES  454 (502)
Q Consensus       378 ~~~~~~~la~~l~~~l~~~~~~~l~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  454 (502)
                      +.++..++++++.+.|++. ++++..++.   .++++|.++.. .                         +  ..++.+.
T Consensus       291 ~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~-~-------------------------~--~~~l~~~  341 (411)
T 3nnk_A          291 GIARHKLHGDALVKGIQAM-GLETFGDLKHKMNNVLGVVIPQG-I-------------------------N--GDQARKL  341 (411)
T ss_dssp             HHHHHHHHHHHHHHHHHHT-TCCBCSCGGGBCSSEEEEECCTT-C-------------------------C--HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHc-CCEeCCCcccccccEEEEECCCC-C-------------------------C--HHHHHHH
Confidence            9999999999999999987 888765432   45677766421 1                         0  2356666


Q ss_pred             HHhc-CcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          455 INVS-GKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       455 l~~~-g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      |.++ |..+.++....+..++|++++++.+++++|+++++.|+++.++
T Consensus       342 l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~  389 (411)
T 3nnk_A          342 MLEDFGIEIGTSFGPLHGKVWRIGTMGYNARKDCVMTTLSALEAVLNY  389 (411)
T ss_dssp             HHHHHSEEEEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred             HHHhcCeEEeCccCCCCCCEEEEeCccCcCCHHHHHHHHHHHHHHHHH
Confidence            6666 7654333222234589999866777888999999999998764

>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}

Probab=99.97  E-value=4.2e-29  Score=255.95  Aligned_cols=356  Identities=12%  Similarity=0.074  Sum_probs=240.9

Q ss_pred             CCCCcccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHH
Q 037144           74 WQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEAL  153 (502)
Q Consensus        74 ~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~  153 (502)
                      ..+|.++.+.+++..++..+.+.+...   ...  ..++...++..++++++++++|.+...      ..++++|||+++
T Consensus         7 ~~~~~~~~~~p~p~~~~~~v~~a~~~~---~~~--~~~~~~~~~~~~l~~~la~~~g~~~~~------~~~~~~s~t~al   75 (416)
T 3isl_A            7 LCTPLRTIMTPGPVEVDPRVLRVMSTP---VVG--QFDPAFTGIMNETMEMLRELFQTKNRW------AYPIDGTSRAGI   75 (416)
T ss_dssp             CCCCCCEECSSSSCCCCHHHHHHTTSC---CCC--TTSHHHHHHHHHHHHHHHHHTTCCCSE------EEEEESCHHHHH
T ss_pred             cCcccceeecCCCcCcCHHHHHHhccc---CCC--CccHHHHHHHHHHHHHHHHHhCCCCCc------EEEecCcHHHHH
Confidence            345666667666655555555544331   111  223555778889999999999987642      234889999999


Q ss_pred             HHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh--HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcC
Q 037144          154 LCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA--FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAE  231 (502)
Q Consensus       154 ~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s--~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g  231 (502)
                      ..++.+...           +++.|+++..+|++  +.++++..|+   +++.+|++.  ++.+|+++|+++|++..   
T Consensus        76 ~~~~~~l~~-----------~gd~Vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~~---  136 (416)
T 3isl_A           76 EAVLASVIE-----------PEDDVLIPIYGRFGYLLTEIAERYGA---NVHMLECEW--GTVFDPEDIIREIKKVK---  136 (416)
T ss_dssp             HHHHHHHCC-----------TTCEEEEEESSHHHHHHHHHHHHTTC---EEEEEECCT--TCCCCHHHHHHHHHHHC---
T ss_pred             HHHHHHhcC-----------CCCEEEEecCCcccHHHHHHHHhcCC---eeEEEecCC--CCCCCHHHHHHHHhhCC---
Confidence            877766532           67788888899998  7788999999   999999986  45899999999998421   


Q ss_pred             CccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceE
Q 037144          232 LIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCC  311 (502)
Q Consensus       232 ~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~  311 (502)
                        +.+|++++++|++|.+.|+++|+++|++||+++|+|++|+.+....+. ..     .++|++++++|||+++|.++|+
T Consensus       137 --~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~-~~-----~~~d~~~~s~~K~l~g~~g~g~  208 (416)
T 3isl_A          137 --PKIVAMVHGETSTGRIHPLKAIGEACRTEDALFIVDAVATIGGCEVKV-DE-----WKIDAAIGGTQKCLSVPSGMAP  208 (416)
T ss_dssp             --CSEEEEESEETTTTEECCCHHHHHHHHHTTCEEEEECTTTTTTSCCCT-TT-----TTCSEEECCSSSTTCCCSSEEE
T ss_pred             --CcEEEEEccCCCCceecCHHHHHHHHHHcCCEEEEECCccccCCCcch-hh-----cCCCEEEecCccccCCCCCeEE
Confidence              248999999999999999999999999999999999999765544321 11     1689999999999999999999


Q ss_pred             EEeeCchhhhhhhcCC----cc--------cccCccCCCCCcccccCC-------CcccccC-CCC-CCchHHHHHHHHh
Q 037144          312 LWVKDPSCLLSTLSTN----PQ--------YLKNEATDQEPKEQEVGY-------KDWQITL-CRR-FRSLKLWVVIRNF  370 (502)
Q Consensus       312 ~~~r~~~~l~~~~~~~----~~--------yl~~~~~~~~~~~~~~~~-------~~~~~~~-sr~-~~al~~~~~l~~~  370 (502)
                      +++++.. .. .+...    ..        +.......   .....+.       ....+.. +.. .....++.+++.+
T Consensus       209 ~~~~~~~-~~-~~~~~~~~~~Gw~~~~~~~~~~gg~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~  283 (416)
T 3isl_A          209 ITYNERV-AD-VIAARKKVERGIATQADRAALSGNRPI---TSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLV  283 (416)
T ss_dssp             EEECHHH-HH-HHHTC------------------CCCC---SCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHH
T ss_pred             EEECHHH-HH-HhhccccccccccccccchhccCCCCC---CccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHH
Confidence            9886542 22 22110    00        00000000   0000000       0001111 111 1223555666666


Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCC---eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHH
Q 037144          371 GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRN---FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEF  447 (502)
Q Consensus       371 g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  447 (502)
                      ...|++++.++..++++++.+.|++. ++++..++.   ..+++|.++...                          +  
T Consensus       284 ~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~--------------------------~--  334 (416)
T 3isl_A          284 LEEGLETRFERHRHHEAALAAGIKAM-GLRLFGDDSCKMPVVTCVEIPGGI--------------------------D--  334 (416)
T ss_dssp             HHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBCSCGGGBCTTEEEEECCTTC--------------------------C--
T ss_pred             HHhhHHHHHHHHHHHHHHHHHHHHHc-CCEeccCccccCCcEEEEeCCCCC--------------------------C--
Confidence            66678999999999999999999996 888875432   356777764211                          0  


Q ss_pred             HHHHHHHHHhc-CcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          448 NRELLESINVS-GKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       448 ~~~l~~~l~~~-g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      ..++.+.|.++ |..+.++....+..++|++++.+.+++++|++++++|+++.++
T Consensus       335 ~~~l~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~~~~  389 (416)
T 3isl_A          335 GESVRDMLLAQFGIEIASSFGPLAGKIWRIGTMGYSCRKENVLFVLAGLEAVLLR  389 (416)
T ss_dssp             HHHHHHHHHHHHCEECBCCCSTTTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCEEEecCCCCCCCCEEEEecccCCCcHHHHHHHHHHHHHHHHH
Confidence            24567777666 7543322211235689999976777776699999999998764

>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*

Probab=99.96  E-value=5.8e-28  Score=249.81  Aligned_cols=378  Identities=14%  Similarity=0.104  Sum_probs=241.9

Q ss_pred             CchhHhhcCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCcccccCCCC---CCHHHHHHHHH--HhhcCC-CCccccc
Q 037144           37 EPGYLKKRLPESAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYFPAT---SSVAGIVGEML--SSGFNV-VGLDWIS  110 (502)
Q Consensus        37 ~~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~---~~~~~~~~~~l--~~~~n~-~~~~~~~  110 (502)
                      -|+.++.. +..+| +|.+..++++++.....++..     +|..|...+   ...|..+.+++  ...+.. +......
T Consensus        30 ~p~~~~~~-~~~lp-~~~~~~~~~~~~~~l~~~~~~-----~~~~~~~~g~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~  102 (438)
T 1wyu_A           30 LPKEILSP-PIDLP-EPLPEWKVLEELRRLAAQNLP-----AHKAFLGGGVRSHHVPPVVQALAARGEFLTAYTPYQPEV  102 (438)
T ss_dssp             SCGGGSSC-CCCCC-CCCCHHHHHHHHHHHHHTSCC-----CTTCCCCSSCCCCCCCHHHHHHHTSHHHHHCCSCCSGGG
T ss_pred             CcHHHhcC-CCCCC-CCCCHHHHHHHHHHHHhcCcC-----ccccccCCCccCCcCcHHHHHHHhcchhhhcCCCCcchh
Confidence            37777777 77899 789999999999876554422     233333222   22445544443  222222 1111235


Q ss_pred             ChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHH
Q 037144          111 SPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQK  190 (502)
Q Consensus       111 ~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~  190 (502)
                      +++..+++.++.+++++++|++..       ++++++|+|.++..++.+.+..          ++++|+++...|.++..
T Consensus       103 ~~g~~~~~~~~~~~la~~~g~~~~-------~i~~~~g~taa~ea~~~a~~~~----------~gd~Viv~~~~h~s~~~  165 (438)
T 1wyu_A          103 SQGVLQATFEYQTMIAELAGLEIA-------NASMYDGATALAEGVLLALRET----------GRMGVLVSQGVHPEYRA  165 (438)
T ss_dssp             CHHHHHHHHHHHHHHHHHHTSSEE-------CSCBSSHHHHHHHHHHHHHHHH----------TCCEEEEETTSCHHHHH
T ss_pred             hhhHHHHHHHHHHHHHHHhCCCcc-------ceEEeCcHHHHHHHHHHHHhcC----------CCCEEEEcCccCHhHHH
Confidence            778889999999999999999754       4688898884433222222221          57789999999998775


Q ss_pred             HH----HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEE
Q 037144          191 AA----QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWV  266 (502)
Q Consensus       191 aa----~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~l  266 (502)
                      ++    +..|+   +++.+|++   ++.+|+++    |++      .+.+|+++++ |++|.++|+++|+++|+++|+|+
T Consensus       166 ~~~~~a~~~G~---~v~~v~~~---~~~~d~~~----i~~------~t~~v~i~~p-n~tG~~~~l~~i~~la~~~g~~v  228 (438)
T 1wyu_A          166 VLRAYLEAVGA---KLLTLPLE---GGRTPLPE----VGE------EVGAVVVQNP-NFLGALEDLGPFAEAAHGAGALF  228 (438)
T ss_dssp             HHHHHHHHTTC---EEEEECCB---TTBCCCCC----CCT------TEEEEEEESS-CTTSBCCCHHHHHHHHHHTTCEE
T ss_pred             HHHHHHHHCCC---EEEEEcCc---CCccCHHH----hCC------CeEEEEEECC-CCCeEEecHHHHHHHHHHcCCEE
Confidence            44    55899   99999973   45888776    432      2458888888 99999999999999999999999


Q ss_pred             Eeecc-cccccccCccchhhhcCCCCCCeeEEccCC-----cCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCC-
Q 037144          267 HVDAA-YAGSACICPEFRHFIDGVECVDSFSFNPHK-----WLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQE-  339 (502)
Q Consensus       267 hVDaA-~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK-----~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~-  339 (502)
                      |||.. ++.+.+..+  ...     ++|+++++.||     |+++| ++|++++++. ... .+   +.++.....+.. 
T Consensus       229 ivd~d~~a~g~~~~~--~~~-----g~D~~~~s~kk~~~~~~~~Gp-~~G~l~~~~~-~~~-~l---~~~~~g~~~~~~~  295 (438)
T 1wyu_A          229 VAVADPLSLGVLKPP--GAY-----GADIAVGDGQSLGLPMGFGGP-HFGFLATKKA-FVR-QL---PGRLVSETVDVEG  295 (438)
T ss_dssp             EEECCTTGGGTBCCH--HHH-----TCSEEEEECTTTTCCCGGGCS-CCEEEEECGG-GGG-GC---CSCCEEEEEBTTS
T ss_pred             EEEechhhccCcCCC--ccC-----CCCEEEECCcccCCCccCCCC-CeeEEEEcHH-HHH-hC---CCceeccccccCC
Confidence            96643 322222233  221     79999999888     67778 8999988754 222 22   222211000000 


Q ss_pred             CcccccCC--Ccc--cc-cCCCCC---Cc-hHHHHH--HHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-CCe
Q 037144          340 PKEQEVGY--KDW--QI-TLCRRF---RS-LKLWVV--IRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP-RNF  407 (502)
Q Consensus       340 ~~~~~~~~--~~~--~~-~~sr~~---~a-l~~~~~--l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~-~~~  407 (502)
                      ...-.+++  ...  .. ..+...   .+ .+++++  +..++.+|++++.++..++++++.+.|+++||+++..+ +.+
T Consensus       296 ~~~~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~  375 (438)
T 1wyu_A          296 RRGFILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEVPGVRPFTPKPFF  375 (438)
T ss_dssp             CEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCEECSCSSBC
T ss_pred             CcceeeeccccccccchhcccCCccchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCeEECCCCCeE
Confidence            00000000  000  00 011111   11 233333  77788899999999999999999999999999999865 344


Q ss_pred             eEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEE-EEeeeECCEEEEEEEecCCCCcHH
Q 037144          408 SLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVF-MTHAIVGGIYVLRFAAGNSMTMES  486 (502)
Q Consensus       408 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~-~~~~~~~g~~~lR~~~~~~~t~~~  486 (502)
                      .+++|+....                              ..++.++|.++|..+ +.++.+.+..++|+|++ ..++++
T Consensus       376 ~~~~~~~~~~------------------------------~~~~~~~L~~~gi~v~~~~~~~~~~~~lRis~~-~~~t~e  424 (438)
T 1wyu_A          376 NEFALALPKD------------------------------PEAVRRALAERGFHGATPVPREYGENLALFAAT-ELHEEE  424 (438)
T ss_dssp             SEEEEECSSC------------------------------HHHHHHHHHHTTCCCCEECCTTSCSSEEEEECC-TTCCHH
T ss_pred             EEEEEeCCCC------------------------------HHHHHHHHHHCCceeccccccccCCCeEEEEec-ccCCHH
Confidence            5566654211                              245677777778653 12333233568999987 567788


Q ss_pred             HHHHHHHHHHHHH
Q 037144          487 HVRAAWTVVQEHL  499 (502)
Q Consensus       487 di~~~~~~l~~~~  499 (502)
                      |+++++++|+++.
T Consensus       425 di~~~~~~l~~~l  437 (438)
T 1wyu_A          425 DLLALREALKEVL  437 (438)
T ss_dssp             HHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHh
Confidence            9999999998764

>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*

Probab=99.96  E-value=4.5e-28  Score=244.89  Aligned_cols=340  Identities=13%  Similarity=0.097  Sum_probs=233.8

Q ss_pred             ccccCCCCCCHHHHHHHHHHhh---cCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHH
Q 037144           79 YFAYFPATSSVAGIVGEMLSSG---FNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLC  155 (502)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~l~~~---~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~  155 (502)
                      |+++..+++.++.++..+....   .......|..+.....+..++.+++++++|.+.+       .+++|+||++|+..
T Consensus         3 yld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~-------~i~~~~g~~~a~~~   75 (382)
T 4hvk_A            3 YFDYTSAKPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGG-------TVVFTSGATEANNL   75 (382)
T ss_dssp             BCBTTTCCCCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHTTCTTE-------EEEEESSHHHHHHH
T ss_pred             eecCCCcCCCCHHHHHHHHHHHHhhcCCCcccchHHHHHHHHHHHHHHHHHHHcCCCcC-------eEEEECCchHHHHH
Confidence            5666655555555443332222   2112223444456678888999999999999754       58999999999988


Q ss_pred             HHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH---cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCC
Q 037144          156 TLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI---VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAEL  232 (502)
Q Consensus       156 al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~---~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~  232 (502)
                      ++.+......+       +++.|+++...|+++..++..   .|+   +++.+|+++  ++.+|+++|+++++++     
T Consensus        76 ~~~~~~~~~~~-------~gd~vi~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~-----  138 (382)
T 4hvk_A           76 AIIGYAMRNAR-------KGKHILVSAVEHMSVINPAKFLQKQGF---EVEYIPVGK--YGEVDVSFIDQKLRDD-----  138 (382)
T ss_dssp             HHHHHHHHHGG-------GCCEEEEETTCCHHHHHHHHHHHHTTC---EEEEECBCT--TSCBCHHHHHHHCCTT-----
T ss_pred             HHHHhhhhhcC-------CCCEEEECCCCcHHHHHHHHHHHhcCC---EEEEeccCC--CCCcCHHHHHHHhccC-----
Confidence            88876531111       677899999999998887665   488   999999985  5699999999998653     


Q ss_pred             ccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEE
Q 037144          233 IPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCL  312 (502)
Q Consensus       233 ~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~  312 (502)
                       +.+|+++.++|++|.+.|+++|.++|++||+ +|+|++|+.+....+. ...     ++|+++.++||++ +|.|+|++
T Consensus       139 -~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~-li~D~a~~~~~~~~~~-~~~-----~~d~~~~s~~K~~-g~~g~g~~  209 (382)
T 4hvk_A          139 -TILVSVQHANNEIGTIQPVEEISEVLAGKAA-LHIDATASVGQIEVDV-EKI-----GADMLTISSNDIY-GPKGVGAL  209 (382)
T ss_dssp             -EEEEECCSBCTTTCBBCCHHHHHHHHSSSSE-EEEECTTTBTTBCCCH-HHH-----TCSEEEEESGGGT-SCTTCEEE
T ss_pred             -ceEEEEECCCCCceeeCCHHHHHHHHHHcCE-EEEEhHHhcCCCCCCc-hhc-----CCCEEEEeHHHhc-CCCceEEE
Confidence             3489999999999999999999999999999 9999999776554332 111     6899999999975 57789999


Q ss_pred             EeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCC-C-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHH
Q 037144          313 WVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCR-R-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFE  390 (502)
Q Consensus       313 ~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr-~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~  390 (502)
                      ++++...+.       .++......            .....+. . .....+..+++. ..++++++.++..++++++.
T Consensus       210 ~~~~~~~~~-------~~~~~~~~~------------~~~~~~~~~~~~~~~~~~al~~-~~~~~~~~~~~~~~~~~~l~  269 (382)
T 4hvk_A          210 WIRKEAKLQ-------PVILGGGQE------------NGLRSGSENVPSIVGFGKAAEI-TAMEWREEAERLRRLRDRII  269 (382)
T ss_dssp             EEETTCCCC-------CSSCSSCTG------------GGTSCSCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred             EEcCccCcC-------cccccCCCc------------CccccCCcCHHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHHH
Confidence            987653211       111111000            0000110 1 111233344442 35688999999999999999


Q ss_pred             HHHhcCCCeEEecCCC---eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeee
Q 037144          391 RLVTSDKRFEVAFPRN---FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAI  467 (502)
Q Consensus       391 ~~l~~~~~~~l~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~  467 (502)
                      +.|+++|++++..++.   .++++|.+....                             ..++.+.|.++|..+..+..
T Consensus       270 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~l~~~gi~v~~g~~  320 (382)
T 4hvk_A          270 DNVLKIEESYLNGHPEKRLPNNVNVRFSYIE-----------------------------GESIVLSLDMAGIQASTGSA  320 (382)
T ss_dssp             HHHTTSTTEEECSCSSSBCTTEEEEEETTCC-----------------------------HHHHHHHHHHTTCBCBCC--
T ss_pred             HHHhcCCCeEEeCCccccCCCEEEEEECCCC-----------------------------HHHHHHHHHHCCEEEeeCCc
Confidence            9999999999875432   347777764321                             23566777777864332211


Q ss_pred             EC-------------C------EEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          468 VG-------------G------IYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       468 ~~-------------g------~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      +.             +      ..++|++++ ..+++++++++++.|+++.++
T Consensus       321 ~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~-~~~t~e~i~~~~~~l~~~~~~  372 (382)
T 4hvk_A          321 CSSKTLQPSHVLMACGLKHEEAHGTLLLTLG-RYNTDEDVDRLLEVLPGVIER  372 (382)
T ss_dssp             ------CCCHHHHHTTCCHHHHHTEEEEECC-TTCCHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCcchHHHHHcCCChhhcCCeEEEEcC-CCCCHHHHHHHHHHHHHHHHH
Confidence            11             0      468999986 456777999999999988654

>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*

Probab=99.96  E-value=7.8e-28  Score=244.35  Aligned_cols=353  Identities=11%  Similarity=0.063  Sum_probs=237.7

Q ss_pred             CCcccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHH
Q 037144           76 SPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLC  155 (502)
Q Consensus        76 ~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~  155 (502)
                      .|+++.+.+++..++..+.+.+......   .  ..+....+..++++++++++|.+...      .+++|+||++|+..
T Consensus        21 ~~~~~~~~p~p~~~~~~v~~a~~~~~~~---~--~~~~~~~~~~~l~~~la~~~~~~~~~------~v~~~~gg~~al~~   89 (393)
T 3kgw_A           21 VPTRLLLGPGPSNLAPRVLAAGSLRMIG---H--MQKEMLQIMEEIKQGIQYVFQTRNPL------TLVVSGSGHCAMET   89 (393)
T ss_dssp             CCCCEECSSSCCCCCHHHHHHTTCCCCC---T--TSHHHHHHHHHHHHHHHHHHTCCCSE------EEEESCCTTTHHHH
T ss_pred             CccceeccCCCCCCCHHHHHHhcccccC---c--ccHHHHHHHHHHHHHHHHHhCCCCCc------EEEEeCCcHHHHHH
Confidence            4667777777666666665555442211   1  23555677888999999999987542      47899999999988


Q ss_pred             HHHHHHHHHHHHhCccCCCCeEEEeCCCCch--hHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCc
Q 037144          156 TLTAARDRVLKKIGRENISKLVVYSSDQTHC--AFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELI  233 (502)
Q Consensus       156 al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~--s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~  233 (502)
                      ++.+...           +++.|+++..+|+  .+...++..|.   +++.+|++.  ++.+|+++|+++|++..     
T Consensus        90 ~~~~~~~-----------~gd~vl~~~~~~~~~~~~~~~~~~g~---~~~~~~~~~--~~~~d~~~l~~~i~~~~-----  148 (393)
T 3kgw_A           90 ALFNLLE-----------PGDSFLTGTNGIWGMRAAEIADRIGA---RVHQMIKKP--GEHYTLQEVEEGLAQHK-----  148 (393)
T ss_dssp             HHHHHCC-----------TTCEEEEEESSHHHHHHHHHHHHTTC---EEEEEECCT--TCCCCHHHHHHHHHHHC-----
T ss_pred             HHHhcCC-----------CCCEEEEEeCCchhHHHHHHHHHcCC---ceEEEeCCC--CCCCCHHHHHHHHhhCC-----
Confidence            8776633           5677888777876  44778888999   999999975  45899999999998721     


Q ss_pred             cEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEE
Q 037144          234 PLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLW  313 (502)
Q Consensus       234 p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~  313 (502)
                      +.+|+++.++|++|.+.|+++|.++|++||+|+++|++|+.+....+. ..     .++|++++++||++++|.++|+++
T Consensus       149 ~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~-~~-----~~~d~~~~s~sK~~~~~~g~g~~~  222 (393)
T 3kgw_A          149 PVLLFLVHGESSTGVVQPLDGFGELCHRYQCLLLVDSVASLGGVPIYM-DQ-----QGIDIMYSSSQKVLNAPPGISLIS  222 (393)
T ss_dssp             CSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTTTTSCCCT-TT-----TTCCEEEEESSSTTCCCSSCEEEE
T ss_pred             CcEEEEeccCCcchhhccHHHHHHHHHHcCCEEEEECCccccCcccch-hh-----cCCCEEEecCcccccCCCceeEEE
Confidence            337899999999999999999999999999999999999754333221 11     168999999999998888999998


Q ss_pred             eeCchhhhhhhcCCc---cc-ccCccCCCCCcccccCCCc-cccc-CCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHH
Q 037144          314 VKDPSCLLSTLSTNP---QY-LKNEATDQEPKEQEVGYKD-WQIT-LCRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMA  386 (502)
Q Consensus       314 ~r~~~~l~~~~~~~~---~y-l~~~~~~~~~~~~~~~~~~-~~~~-~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la  386 (502)
                      +++.. .........   .+ +.....     ...+.... .... .+.. ....++..++..+..++++++.++..+++
T Consensus       223 ~~~~~-~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~  296 (393)
T 3kgw_A          223 FNDKA-KYKVYSRKTKPVSFYTDITYL-----AKLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWRRHREAT  296 (393)
T ss_dssp             ECHHH-HHHHHTCSSCCSCSTTCHHHH-----HHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred             ECHHH-HHHHhccCCCCCceeecHHHH-----HHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            86542 222111110   11 100000     00000000 0000 0111 12234455666666677899999999999


Q ss_pred             HHHHHHHhcCCCeEEecCC---C-eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcE
Q 037144          387 KLFERLVTSDKRFEVAFPR---N-FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKV  461 (502)
Q Consensus       387 ~~l~~~l~~~~~~~l~~~~---~-~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~  461 (502)
                      +++.+.|+++ ++++..++   . ..+++|.++.. .                           ...++.++|.++ |..
T Consensus       297 ~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~-~---------------------------~~~~~~~~l~~~~gi~  347 (393)
T 3kgw_A          297 AHLHKHLQEM-GLKFFVKDPEIRLPTITTVTVPAG-Y---------------------------NWRDIVSYVLDHFSIE  347 (393)
T ss_dssp             HHHHHHHHHT-TCCBSSSSGGGBCSSEEEEECCTT-B---------------------------CHHHHHHHHHHHHCEE
T ss_pred             HHHHHHHHHc-CCeeccCChhhcCCeEEEEeCCCC-C---------------------------CHHHHHHHHHHhCCEE
Confidence            9999999998 88876322   1 23455665321 1                           024567777776 764


Q ss_pred             EEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          462 FMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       462 ~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      +..+....+..++|++++...++++++++++++|+++.++
T Consensus       348 v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~  387 (393)
T 3kgw_A          348 ISGGLGPTEERVLRIGLLGYNATTENVDRVAEALREALQH  387 (393)
T ss_dssp             CBCCCGGGTTTEEEEECCGGGCCHHHHHHHHHHHHHHHHH
T ss_pred             EeCCcccCCCCEEEEEecccCCCHHHHHHHHHHHHHHHHh
Confidence            4333222345689999855666888999999999998765

>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}

Probab=99.96  E-value=1.2e-27  Score=242.54  Aligned_cols=349  Identities=11%  Similarity=0.035  Sum_probs=237.3

Q ss_pred             CcccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHH
Q 037144           77 PNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCT  156 (502)
Q Consensus        77 p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~a  156 (502)
                      ..|+.+...+..++. +.+.+...+..   .|  ++...++.+++.+++++++|.+..      ..+++|+|||+|+..+
T Consensus        20 ~~~l~~~~~~~~~~~-v~~a~~~~~~~---~~--~~~~~~~~~~~~~~la~~~g~~~~------~~v~~~~g~t~a~~~~   87 (386)
T 2dr1_A           20 KYKLFTAGPVACFPE-VLEIMKVQMFS---HR--SKEYRKVHMDTVERLREFLEVEKG------EVLLVPSSGTGIMEAS   87 (386)
T ss_dssp             CSEECCSSSCCCCHH-HHHHTTSCCCC---TT--SHHHHHHHHHHHHHHHHHHTCSSS------EEEEESSCHHHHHHHH
T ss_pred             cceeecCCCcCCcHH-HHHHHhccccc---cc--CHHHHHHHHHHHHHHHHHhCCCCC------cEEEEeCChHHHHHHH
Confidence            356666544444444 44554444321   22  344578889999999999999721      1488999999999888


Q ss_pred             HHHHHHHHHHHhCccCCCCeEEEeCCCCchh--HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCcc
Q 037144          157 LTAARDRVLKKIGRENISKLVVYSSDQTHCA--FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIP  234 (502)
Q Consensus       157 l~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s--~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p  234 (502)
                      +.+...           +++.|+++..+|++  +..+++..|+   +++.+|++.  ++.+|+++|+++|++..    .+
T Consensus        88 ~~~l~~-----------~gd~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~l~~~~----~~  147 (386)
T 2dr1_A           88 IRNGVS-----------KGGKVLVTIIGAFGKRYKEVVESNGR---KAVVLEYEP--GKAVKPEDLDDALRKNP----DV  147 (386)
T ss_dssp             HHHHSC-----------TTCEEEEEESSHHHHHHHHHHHHTTC---EEEEEECCT--TCCCCHHHHHHHHHHCT----TC
T ss_pred             HHHhhc-----------CCCeEEEEcCCchhHHHHHHHHHhCC---ceEEEecCC--CCCCCHHHHHHHHhcCC----CC
Confidence            876532           56788889899998  8888899999   999999975  46899999999996521    24


Q ss_pred             EEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEe
Q 037144          235 LFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWV  314 (502)
Q Consensus       235 ~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~  314 (502)
                      .+|+++.++|++|.+.|+++|.++|++||+++|+|++|+.+....+ .    ... ++|+++.++||+++.|.++|++++
T Consensus       148 ~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~-~----~~~-~~di~~~s~sK~~~~~~g~G~~~~  221 (386)
T 2dr1_A          148 EAVTITYNETSTGVLNPLPELAKVAKEHDKLVFVDAVSAMGGADIK-F----DKW-GLDVVFSSSQKAFGVPPGLAIGAF  221 (386)
T ss_dssp             CEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTBTTBCCC-T----TTT-TCSEEEEETTSTTCCCSSCEEEEE
T ss_pred             cEEEEEeecCCcchhCCHHHHHHHHHHcCCeEEEEccccccCcccc-c----ccc-CCcEEEEeccccccCCCceEEEEE
Confidence            5788889999999999999999999999999999999987654322 1    111 689999999999999888999988


Q ss_pred             eCchhhhhhhcC--CcccccCccCCCCCcccccCCC-cccccCCCC-CCchHHHHHHHHhcHH-HHHHHHHHHHHHHHHH
Q 037144          315 KDPSCLLSTLST--NPQYLKNEATDQEPKEQEVGYK-DWQITLCRR-FRSLKLWVVIRNFGVA-NLRNFIRSHVGMAKLF  389 (502)
Q Consensus       315 r~~~~l~~~~~~--~~~yl~~~~~~~~~~~~~~~~~-~~~~~~sr~-~~al~~~~~l~~~g~~-g~~~~~~~~~~la~~l  389 (502)
                      ++. ... .+..  ...+......      ...... ......+.. .....+..+++.+... +++++.++..++++++
T Consensus       222 ~~~-~~~-~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~l  293 (386)
T 2dr1_A          222 SER-FLE-IAEKMPERGWYFDIPL------YVKYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMV  293 (386)
T ss_dssp             CHH-HHH-HHTTCTTCCSTTCHHH------HHHHHHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred             CHH-HHH-HHhcCCCCceEEeHHH------HHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence            653 222 2211  0111100000      000000 000001111 1223455566665455 6888999999999999


Q ss_pred             HHHHhcCCCeEEecCC---CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEee
Q 037144          390 ERLVTSDKRFEVAFPR---NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHA  466 (502)
Q Consensus       390 ~~~l~~~~~~~l~~~~---~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~  466 (502)
                      .+.|+++ ++++..++   ..++++|.++.. .                           ...++.++|.++|..+..+.
T Consensus       294 ~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~-~---------------------------~~~~~~~~l~~~gi~v~~~~  344 (386)
T 2dr1_A          294 REGVREI-GLDILAEPGHESPTITAVLTPPG-I---------------------------KGDEVYEAMRKRGFELAKGY  344 (386)
T ss_dssp             HHHHHHT-TCCBSSCTTCBCSSEEEEECCTT-C---------------------------CHHHHHHHHHHTTEECEECC
T ss_pred             HHHHHHc-CCeeCcCccccCCceEEEEcCCC-C---------------------------CHHHHHHHHHHCCeEEecCc
Confidence            9999998 88876442   356777776421 0                           03467777877876543332


Q ss_pred             eECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          467 IVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       467 ~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      ...+..++|++++. .+++++++++++.|+++.++
T Consensus       345 ~~~~~~~iRi~~~~-~~~~~~i~~~~~~l~~~~~~  378 (386)
T 2dr1_A          345 GSVKEKTFRIGHMG-YMKFEDIQEMLDNLREVINE  378 (386)
T ss_dssp             GGGTTTEEEEECCS-SCCHHHHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCC-CCCHHHHHHHHHHHHHHHHH
Confidence            22234689999864 46777999999999987654

>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*

Probab=99.96  E-value=1.1e-27  Score=243.71  Aligned_cols=353  Identities=15%  Similarity=0.071  Sum_probs=231.9

Q ss_pred             CcccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHH
Q 037144           77 PNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCT  156 (502)
Q Consensus        77 p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~a  156 (502)
                      ++.+.+.+++..++..+.+.+...+..   .|  ++.......++++++++++|.+...      .+++|+|||+|+..+
T Consensus        18 ~~~~~~~~g~~~~~~~v~~a~~~~~~~---~~--~~~~~~~~~~l~~~la~~~g~~~~~------~i~~~~g~t~a~~~~   86 (393)
T 2huf_A           18 PNKLLMGPGPSNAPQRVLDAMSRPILG---HL--HPETLKIMDDIKEGVRYLFQTNNIA------TFCLSASGHGGMEAT   86 (393)
T ss_dssp             CCCEECSSSCCCCCHHHHHHTTSCCCC---TT--SHHHHHHHHHHHHHHHHHHTCCCSE------EEEESSCHHHHHHHH
T ss_pred             CCeEEecCCCCCCCHHHHHHHHhhhcc---CC--CHHHHHHHHHHHHHHHHHhCCCCCc------EEEEcCcHHHHHHHH
Confidence            444455555544555555665554432   22  3445677788999999999986531      478999999999888


Q ss_pred             HHHHHHHHHHHhCccCCCCeEEEeCCCCchhH--HHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCcc
Q 037144          157 LTAARDRVLKKIGRENISKLVVYSSDQTHCAF--QKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIP  234 (502)
Q Consensus       157 l~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~--~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p  234 (502)
                      +.+...           +++.|+++..+|++.  .+.++..|+   +++.+|+++  ++.+|+++|+++|++.     .+
T Consensus        87 ~~~~~~-----------~gd~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~-----~~  145 (393)
T 2huf_A           87 LCNLLE-----------DGDVILIGHTGHWGDRSADMATRYGA---DVRVVKSKV--GQSLSLDEIRDALLIH-----KP  145 (393)
T ss_dssp             HHHHCC-----------TTCEEEEEESSHHHHHHHHHHHHTTC---EEEEEECCT--TCCCCHHHHHHHHHHH-----CC
T ss_pred             HHHHhC-----------CCCEEEEECCCcchHHHHHHHHHcCC---eeEEEeCCC--CCCCCHHHHHHHHhcc-----CC
Confidence            876632           567888888889873  445566898   999999975  4689999999999762     12


Q ss_pred             EEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEe
Q 037144          235 LFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWV  314 (502)
Q Consensus       235 ~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~  314 (502)
                      .+|+++.++|++|.+.|+++|+++|++||+++|+|++++.+....+ .    .. .++|+++.++||++++|.|+|++++
T Consensus       146 ~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~-~----~~-~~~d~~~~s~sK~l~g~~G~G~~~~  219 (393)
T 2huf_A          146 SVLFLTQGDSSTGVLQGLEGVGALCHQHNCLLIVDTVASLGGAPMF-M----DR-WEIDAMYTGSQKVLGAPPGITPVSF  219 (393)
T ss_dssp             SEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCC-T----TT-TTCSEEECCSSSTTCCCSSCEEEEE
T ss_pred             cEEEEEccCCCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCcc-h----hh-cCccEEEECCCcccccCCCeEEEEE
Confidence            3788899999999999999999999999999999999875443222 1    11 1589999999999988888999888


Q ss_pred             eCchhhhhhhcC---CcccccCccCCCCCcccccCC-Cccccc-CCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHH
Q 037144          315 KDPSCLLSTLST---NPQYLKNEATDQEPKEQEVGY-KDWQIT-LCRRF-RSLKLWVVIRNFGVANLRNFIRSHVGMAKL  388 (502)
Q Consensus       315 r~~~~l~~~~~~---~~~yl~~~~~~~~~~~~~~~~-~~~~~~-~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~la~~  388 (502)
                      ++ .........   ..+|.......    ...+.. ...... ++... ...++..+++.+..+++.++.++..+++++
T Consensus       220 ~~-~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~  294 (393)
T 2huf_A          220 SH-RAVERYKRRNTKVKVYYWDMSLV----GDYWGCFGRPRIYHHTISSTLLYGLREAIAMACEEGLPALIARHEDCAKR  294 (393)
T ss_dssp             CH-HHHHHHHTCSSCCSCGGGCHHHH----HHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred             CH-HHHHHHhhcCCCCceEEEchHHH----HhhhccccccCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence            63 332222111   12222110000    000000 000000 11111 112333455555455788899999999999


Q ss_pred             HHHHHhcCCCeEEecCC--Cee-EEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcEEEE
Q 037144          389 FERLVTSDKRFEVAFPR--NFS-LVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKVFMT  464 (502)
Q Consensus       389 l~~~l~~~~~~~l~~~~--~~~-~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~  464 (502)
                      +.+.|+++ ++++..++  ..+ +++|.++.. .                         +  ..++.++|.++ |..+..
T Consensus       295 l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~-~-------------------------~--~~~~~~~L~~~~gi~v~~  345 (393)
T 2huf_A          295 LYRGLQDA-GFELYADPKDRLSTVTTIKVPQG-V-------------------------D--WLKAAQYAMKTYLVEISG  345 (393)
T ss_dssp             HHHHHHHT-TCCBSSCGGGBCTTEEEEECCTT-C-------------------------C--HHHHHHHHHHHHCEECBC
T ss_pred             HHHHHHHc-CCeeccCccccCCcEEEEEcCCC-C-------------------------C--HHHHHHHHHHhCCEEEec
Confidence            99999998 88876443  233 667766421 1                         0  23566666654 754322


Q ss_pred             eeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          465 HAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       465 ~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      +....+..++|++++.+.++++++++++++|+++.++
T Consensus       346 g~~~~~~~~~Ri~~~~~~~~~e~i~~~~~~l~~~~~~  382 (393)
T 2huf_A          346 GLGPTAGQVFRIGLMGQNATTERVDRVLQVFQEAVAA  382 (393)
T ss_dssp             CCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred             CcccccCCEEEEEcccCcCCHHHHHHHHHHHHHHHHH
Confidence            2222245689999865667888999999999988654

>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*

Probab=99.96  E-value=1.1e-27  Score=242.52  Aligned_cols=340  Identities=12%  Similarity=0.081  Sum_probs=230.1

Q ss_pred             ccccCCCCCCHHHHHHHHHHhhcCC--C-CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHH
Q 037144           79 YFAYFPATSSVAGIVGEMLSSGFNV--V-GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLC  155 (502)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~l~~~~n~--~-~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~  155 (502)
                      |+++..+++.++.++..+.....+.  + ...|..++.......++.+++++++|.+.+       .+++|+|||+|+..
T Consensus         3 yld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~-------~v~~~~g~t~a~~~   75 (382)
T 4eb5_A            3 YFDYTSAKPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGG-------TVVFTSGATEANNL   75 (382)
T ss_dssp             BCBTTTCCCCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTCTTE-------EEEEESSHHHHHHH
T ss_pred             eeccCCCCCCCHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCC-------eEEEcCchHHHHHH
Confidence            5666555555555444333222211  1 112444455677888899999999998653       58999999999998


Q ss_pred             HHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH---cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCC
Q 037144          156 TLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI---VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAEL  232 (502)
Q Consensus       156 al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~---~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~  232 (502)
                      ++.+.+..+..       +++.|+++..+|+++..++..   .|+   +++.+|+++  ++.+|+++|+++|+++     
T Consensus        76 ~~~~l~~~~~~-------~gd~Vl~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~-----  138 (382)
T 4eb5_A           76 AIIGYAMRNAR-------KGKHILVSAVEHMSVINPAKFLQKQGF---EVEYIPVGK--YGEVDVSFIDQKLRDD-----  138 (382)
T ss_dssp             HHHHHHHHHGG-------GCCEEEEETTCCHHHHHHHHHHTTTTC---EEEEECBCT--TSCBCHHHHHHHCCTT-----
T ss_pred             HHHHHHhhccC-------CCCEEEECCCcchHHHHHHHHHHhCCc---EEEEeccCC--CCccCHHHHHHHhcCC-----
Confidence            88877632111       567889999999999887765   577   899999975  4689999999988643     


Q ss_pred             ccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEE
Q 037144          233 IPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCL  312 (502)
Q Consensus       233 ~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~  312 (502)
                       +.+|++++++|++|.+.|+++|.++|++||+| |+|++|+.+....+ ....     ++|+++.++||++ +|.|+|++
T Consensus       139 -~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~-i~D~a~~~g~~~~~-~~~~-----~~di~~~s~sK~~-g~~g~G~~  209 (382)
T 4eb5_A          139 -TILVSVQHANNEIGTIQPVEEISEVLAGKAAL-HIDATASVGQIEVD-VEKI-----GADMLTISSNDIY-GPKGVGAL  209 (382)
T ss_dssp             -EEEEECCSBCTTTCBBCCHHHHHHHHTTSSEE-EEECTTTBTTBCCC-HHHH-----TCSEEEEETGGGT-CCSSCEEE
T ss_pred             -CeEEEEeccCCCccccCCHHHHHHHHHHCCCE-EEEcchhcCCcccC-cccc-----CCCEEEeehHHhc-CCCceEEE
Confidence             45888999999999999999999999999999 99999985433222 1111     5899999999985 56689999


Q ss_pred             EeeCchhhhhhhcCCcccccCccCCCCCcccccCCCccccc-CCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHH
Q 037144          313 WVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQIT-LCRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFE  390 (502)
Q Consensus       313 ~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~-~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~  390 (502)
                      ++++...+.       .++......            .... ++.. .....+..+++.+ .++++++.++..++++++.
T Consensus       210 ~~~~~~~l~-------~~~~~~~~~------------~~~~~~~~~~~~~~~~~~al~~~-~~~~~~~~~~~~~~~~~l~  269 (382)
T 4eb5_A          210 WIRKEAKLQ-------PVILGGGQE------------NGLRSGSENVPSIVGFGKAAEIT-AMEWREEAERLRRLRDRII  269 (382)
T ss_dssp             EEETTCCCC-------CSSCSSCTG------------GGTSCSCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred             EEccccccC-------ceecCCCcc------------ccccCCCccHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHH
Confidence            887652111       111110000            0000 0101 1122334455543 4578889999999999999


Q ss_pred             HHHhcCCCeEEecCCC---eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeee
Q 037144          391 RLVTSDKRFEVAFPRN---FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAI  467 (502)
Q Consensus       391 ~~l~~~~~~~l~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~  467 (502)
                      +.|+++|++++..++.   .++++|++.+..                             ..++.+.|.+.|..+..+..
T Consensus       270 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~l~~~gi~v~~g~~  320 (382)
T 4eb5_A          270 DNVLKIEESYLNGHPEKRLPNNVNVRFSYIE-----------------------------GESIVLSLDMAGIQASTGSA  320 (382)
T ss_dssp             HHHTTSTTEEECSCSSSBCTTEEEEEETTSC-----------------------------HHHHHHHHHHHTCBCBCCCG
T ss_pred             HHHhhCCCeEEeCCcccCCCCEEEEEeCCcC-----------------------------HHHHHHHHHHCCEEEecccc
Confidence            9999998999875431   457777764211                             23456666666864432211


Q ss_pred             E-------------------CCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          468 V-------------------GGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       468 ~-------------------~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      .                   .+..++|+++. ..+++++++++++.|+++.++
T Consensus       321 ~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~-~~~~~~~i~~~~~~l~~~~~~  372 (382)
T 4eb5_A          321 CSSKTLQPSHVLMACGLKHEEAHGTLLLTLG-RYNTDEDVDRLLEVLPGVIER  372 (382)
T ss_dssp             GGTSSCCCCHHHHHTTCCHHHHTTEEEEECC-TTCCHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCCcccHHHHHcCCChhccCCeEEEECC-CCCCHHHHHHHHHHHHHHHHH
Confidence            0                   01358999975 456778999999999987654

>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*

Probab=99.96  E-value=3.1e-27  Score=240.25  Aligned_cols=349  Identities=14%  Similarity=0.059  Sum_probs=235.2

Q ss_pred             CCcccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHH
Q 037144           76 SPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLC  155 (502)
Q Consensus        76 ~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~  155 (502)
                      ++.|+++...++.++. +.+.+...+..     ..++.......++++++++++|.+.+       .+++|+|||+|+..
T Consensus         8 ~~~yl~~~~~~~~~~~-v~~a~~~~~~~-----~~~~~~~~~~~~l~~~la~~~g~~~~-------~v~~t~g~t~a~~~   74 (392)
T 2z9v_A            8 DPVITLTAGPVNAYPE-VLRGLGRTVLY-----DYDPAFQLLYEKVVDKAQKAMRLSNK-------PVILHGEPVLGLEA   74 (392)
T ss_dssp             CCSEECSSSCCCCCHH-HHHHTTSCCCC-----TTSHHHHHHHHHHHHHHHHHTTCSSC-------CEEESSCTHHHHHH
T ss_pred             CcceeecCCCcCCCHH-HHHHHhccccc-----cccHHHHHHHHHHHHHHHHHhCCCCC-------EEEEeCCchHHHHH
Confidence            4567777654444444 44555444432     12355566777899999999998643       58999999999988


Q ss_pred             HHHHHHHHHHHHhCccCCCCeEEEeCCCCchhH--HHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCc
Q 037144          156 TLTAARDRVLKKIGRENISKLVVYSSDQTHCAF--QKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELI  233 (502)
Q Consensus       156 al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~--~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~  233 (502)
                      ++.+...           +++.|+++..+|++.  ...++..|+   +++.+|+++  ++.+|+++|+++|++..    .
T Consensus        75 ~~~~~~~-----------~gd~Vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~l~~~~----~  134 (392)
T 2z9v_A           75 AAASLIS-----------PDDVVLNLASGVYGKGFGYWAKRYSP---HLLEIEVPY--NEAIDPQAVADMLKAHP----E  134 (392)
T ss_dssp             HHHHHCC-----------TTCCEEEEESSHHHHHHHHHHHHHCS---CEEEEECCT--TSCCCHHHHHHHHHHCT----T
T ss_pred             HHHHhcC-----------CCCEEEEecCCcccHHHHHHHHHcCC---ceEEeeCCC--CCCCCHHHHHHHHhcCC----C
Confidence            8876632           567788888899875  345566899   999999975  35899999999996521    2


Q ss_pred             cEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEE
Q 037144          234 PLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLW  313 (502)
Q Consensus       234 p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~  313 (502)
                      +.+|+++.++|++|.+.|+++|.++|++||+|+|+|++|+.+....+ ....     ++|+++.++|||+++|.|+|+++
T Consensus       135 ~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~-~~~~-----~~d~~~~s~sK~~~~~~g~G~l~  208 (392)
T 2z9v_A          135 ITVVSVCHHDTPSGTINPIDAIGALVSAHGAYLIVDAVSSFGGMKTH-PEDC-----KADIYVTGPNKCLGAPPGLTMMG  208 (392)
T ss_dssp             CCEEEEESEEGGGTEECCHHHHHHHHHHTTCEEEEECTTTBTTBSCC-GGGG-----TCSEEEECSSSTTCCCSCCEEEE
T ss_pred             CcEEEEeccCCCCceeccHHHHHHHHHHcCCeEEEEcccccCCcccc-cccc-----cceEEEecCcccccCCCceeEEE
Confidence            44788899999999999999999999999999999999986544332 1111     58999999999999888899998


Q ss_pred             eeCchhhhhhhcC-C--c--ccccCccCCCCCcccccCCCcccc-cCCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHH
Q 037144          314 VKDPSCLLSTLST-N--P--QYLKNEATDQEPKEQEVGYKDWQI-TLCRRF-RSLKLWVVIRNFGVANLRNFIRSHVGMA  386 (502)
Q Consensus       314 ~r~~~~l~~~~~~-~--~--~yl~~~~~~~~~~~~~~~~~~~~~-~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~la  386 (502)
                      +++. ... .+.. .  +  .|+......     .  .+..... .++... ....+..+++.+...|++++.++..+++
T Consensus       209 ~~~~-~~~-~l~~~~~g~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~  279 (392)
T 2z9v_A          209 VSER-AWA-KMKANPLAPRASMLSIVDWE-----N--AWSRDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHALTA  279 (392)
T ss_dssp             ECHH-HHH-HHHTCTTSCCSSTTCSGGGT-----T--TTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred             ECHH-HHH-HhhhccCCCCceeccHHHHH-----h--hhcccCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence            8654 222 2211 0  1  111100000     0  0000000 011111 1134455666655566888999999999


Q ss_pred             HHHHHHHhcCCCeEEecCC----CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcE
Q 037144          387 KLFERLVTSDKRFEVAFPR----NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKV  461 (502)
Q Consensus       387 ~~l~~~l~~~~~~~l~~~~----~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~  461 (502)
                      +++.+.|+++ ++++..++    ..++++|+++.. .                         +  ..++.++|.++ |..
T Consensus       280 ~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~-~-------------------------~--~~~l~~~L~~~~gi~  330 (392)
T 2z9v_A          280 KAMRAGVTAM-GLSVWAASDSIASPTTTAVRTPDG-V-------------------------D--EKALRQAARARYGVV  330 (392)
T ss_dssp             HHHHHHHHHT-TCCBSSSSGGGBCTTEEEEECCTT-C-------------------------C--HHHHHHHHHHHHCEE
T ss_pred             HHHHHHHHHc-CCeeccCCccccCCceEEEECCCC-C-------------------------C--HHHHHHHHHhcCCEE
Confidence            9999999988 88876523    355677776421 0                         0  23567777776 865


Q ss_pred             EEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          462 FMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       462 ~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      +..+....+..++|+++..+.+++++++++++.|+++.++
T Consensus       331 v~~g~~~~~~~~lRi~~~~~~~~~~~i~~~~~~l~~~~~~  370 (392)
T 2z9v_A          331 FSSGRGETLGKLTRIGHMGPTAQPIYAIAALTALGGAMNA  370 (392)
T ss_dssp             CEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred             EecCCCCCCCCeEEEeCcccccCHHHHHHHHHHHHHHHHH
Confidence            4433222345689999644356788999999999988764

>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*

Probab=99.96  E-value=8.6e-28  Score=240.26  Aligned_cols=342  Identities=12%  Similarity=0.057  Sum_probs=228.4

Q ss_pred             cCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHH
Q 037144           82 YFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAAR  161 (502)
Q Consensus        82 ~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~  161 (502)
                      +.+++..++..+.+.+...+..     ..++.......++++++++++|.+...     ..+++|+|||+|+..++.+.+
T Consensus         4 ~~~gp~~~~~~v~~a~~~~~~~-----~~~~~~~~~~~~l~~~la~~~g~~~~~-----~~v~~t~g~t~a~~~~~~~~~   73 (353)
T 2yrr_A            4 LTPGPTPIPERVQKALLRPMRG-----HLDPEVLRVNRAIQERLAALFDPGEGA-----LVAALAGSGSLGMEAGLANLD   73 (353)
T ss_dssp             CSSSSCCCCHHHHGGGGSCCCC-----TTCHHHHHHHHHHHHHHHHHHCCCTTC-----EEEEESSCHHHHHHHHHHTCS
T ss_pred             CCCCCCCCCHHHHHHHhccccc-----ccCHHHHHHHHHHHHHHHHHhCCCCCC-----ceEEEcCCcHHHHHHHHHHhc
Confidence            3344444444455555554432     134666778889999999999986211     158999999999987776542


Q ss_pred             HHHHHHhCccCCCCeEEEeCCCCchh--HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEE
Q 037144          162 DRVLKKIGRENISKLVVYSSDQTHCA--FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCA  239 (502)
Q Consensus       162 ~~~~~~~~~~~~~~~~v~~s~~~H~s--~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~  239 (502)
                                  + +.|+++...|++  +.+.++..|+   +++.+|+++  ++.+|+++|++++++.     ++.+|++
T Consensus        74 ------------~-d~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~l~~~-----~~~~v~~  130 (353)
T 2yrr_A           74 ------------R-GPVLVLVNGAFSQRVAEMAALHGL---DPEVLDFPP--GEPVDPEAVARALKRR-----RYRMVAL  130 (353)
T ss_dssp             ------------C-CCEEEEECSHHHHHHHHHHHHTTC---CEEEEECCT--TSCCCHHHHHHHHHHS-----CCSEEEE
T ss_pred             ------------C-CcEEEEcCCCchHHHHHHHHHcCC---ceEEEeCCC--CCCCCHHHHHHHHHhC-----CCCEEEE
Confidence                        2 456777778887  4567788899   999999975  4689999999999762     1347888


Q ss_pred             ecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchh
Q 037144          240 TVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSC  319 (502)
Q Consensus       240 t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~  319 (502)
                      +.++|++|.+.|+++|.++|++||+|+|+|++|+.+....+ ....     ++|++++++|||+++|.|+|++++++.. 
T Consensus       131 ~~~~nptG~~~~~~~i~~l~~~~~~~li~D~a~~~~~~~~~-~~~~-----~~d~~~~s~~K~~~~~~g~G~~~~~~~~-  203 (353)
T 2yrr_A          131 VHGETSTGVLNPAEAIGALAKEAGALFFLDAVTTLGMLPFS-MRAM-----GVDYAFTGSQKCLSAPPGLAPIAASLEA-  203 (353)
T ss_dssp             ESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTTTTSCCC-HHHH-----TCSEEECCTTSTTCCCSSCEEEEECHHH-
T ss_pred             EccCCCcceecCHHHHHHHHHHcCCeEEEEcCccccccccc-cccc-----CceEEEecCcccccCCCceEEEEECHHH-
Confidence            99999999999999999999999999999999965433222 1111     5799999999999888889999886542 


Q ss_pred             hhhhhcCCc-ccccCccCCCCCcccccCCCcccccCCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 037144          320 LLSTLSTNP-QYLKNEATDQEPKEQEVGYKDWQITLCRRF-RSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK  397 (502)
Q Consensus       320 l~~~~~~~~-~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~  397 (502)
                      + +.+...+ .|+.....     .+...  .....++... ....+..+++.+...+++++.++..++++++.+.|+++ 
T Consensus       204 ~-~~l~~~~~~~~~~~~~-----~~~~~--~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-  274 (353)
T 2yrr_A          204 R-KAFTGKRGWYLDLARV-----AEHWE--RGGYHHTTPVLLHYALLEALDLVLEEGVAARERRAREVYAWVLEELKAR-  274 (353)
T ss_dssp             H-HHCCCCSCSTTCHHHH-----HHHHT--TCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             H-HHhccCCCccccHHHH-----hhhhh--cCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-
Confidence            2 2222111 11110000     00000  0000111111 12344566666666678899999999999999999998 


Q ss_pred             CeEEecCC--CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEE
Q 037144          398 RFEVAFPR--NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLR  475 (502)
Q Consensus       398 ~~~l~~~~--~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR  475 (502)
                      ++++..++  ...+++|+++.. .                         +  ..++.+.|.++|..+..+.......++|
T Consensus       275 g~~~~~~~~~~~~~~~~~~~~~-~-------------------------~--~~~~~~~l~~~gi~v~~g~~~~~~~~iR  326 (353)
T 2yrr_A          275 GFRPYPKASPLPTVLVVRPPEG-V-------------------------D--ADRLVRALYAEGVAVAGGIGPTRGQVLR  326 (353)
T ss_dssp             TCEESCSSSBCTTEEEEECCTT-C-------------------------C--HHHHHHHHHHTTEECEECCGGGTTTCEE
T ss_pred             CCccccCccCCCeEEEEECCCC-C-------------------------C--HHHHHHHHHHCCEEEeCCccccCCCeEE
Confidence            89887543  234556776321 1                         0  2456777777786544333223346899


Q ss_pred             EEecCCCCcHHHHH-HHHHHHHHHHHh
Q 037144          476 FAAGNSMTMESHVR-AAWTVVQEHLEA  501 (502)
Q Consensus       476 ~~~~~~~t~~~di~-~~~~~l~~~~~~  501 (502)
                      ++++...+.+ +++ +++++|+++.+.
T Consensus       327 i~~~~~~~~~-~~~~~~~~~l~~~l~~  352 (353)
T 2yrr_A          327 LGLMGEGARR-EAYQAFLKALDRALAL  352 (353)
T ss_dssp             EECSGGGSCH-HHHHHHHHHHHHHHHC
T ss_pred             EecCccCCHH-HHHHHHHHHHHHHHhh
Confidence            9986555555 888 999999988653

>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}

Probab=99.96  E-value=1.7e-27  Score=238.21  Aligned_cols=393  Identities=12%  Similarity=0.069  Sum_probs=245.4

Q ss_pred             hHhhcCC-CCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCcccccCCCC----CCHHHHHHHHH---HhhcCCCCcccccC
Q 037144           40 YLKKRLP-ESAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYFPAT----SSVAGIVGEML---SSGFNVVGLDWISS  111 (502)
Q Consensus        40 ~l~~~~~-~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~----~~~~~~~~~~l---~~~~n~~~~~~~~~  111 (502)
                      .++..+. ..+|++|-+.+.|--.|.++-.-...+     |.+..--+    -....+++.-.   .-.+...+..-..-
T Consensus        31 ~~~~ll~~r~~P~~g~~d~~ie~~l~~la~mdsnn-----~~~~~g~GERE~Rv~s~lv~rrh~~~~HGiGRSGd~~~~Q  105 (501)
T 3hl2_A           31 LIRLLLEKGKCPENGWDESTLELFLHELAIMDSNN-----FLGNCGVGEREGRVASALVARRHYRFIHGIGRSGDISAVQ  105 (501)
T ss_dssp             HHHHHHHHCCCCSSCCCHHHHHHHHHHHHTTBGGG-----CSSCCCCSSCCCCCSCHHHHHHTTTCCSCBSCSSCTTCCC
T ss_pred             HHHHHHHcCCCCccCCCHHHHHHHHHHHHhhccCC-----CcccCCcccchHHHHHHHHHhhccCcccCCCCccccccCC
Confidence            3455554 489999999887766666553333222     33332111    11112222111   11122222222222


Q ss_pred             h-------hhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCC
Q 037144          112 P-------AAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQT  184 (502)
Q Consensus       112 p-------~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~  184 (502)
                      |       ...--|..+.+||+.+ |+|...      ..++++|+|.+++..+.++.....       .+++.|+++..+
T Consensus       106 PKAaGssll~~ltn~l~ld~L~~~-G~~~~~------~~flVnGsTgg~lamilaa~r~~r-------pg~d~VIvpRn~  171 (501)
T 3hl2_A          106 PKAAGSSLLNKITNSLVLDIIKLA-GVHTVA------NCFVVPMATGMSLTLCFLTLRHKR-------PKAKYIIWPRID  171 (501)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHT-TCTTCC------EEEEESSCHHHHHHHHHHHHHHHC-------TTCCEEEEECCC
T ss_pred             CCccchHHHHHHHHHHHHHHHHHc-CCCCCC------cEEEECcHHHHHHHHHHHHcCccc-------CCCCEEEEecch
Confidence            2       2234566788999888 999753      578899999777666666544310       023678889999


Q ss_pred             chhHHHHHHHcCCCCCCEEEEecCC-CCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhC
Q 037144          185 HCAFQKAAQIVGIDRKNIRAIKTTK-SSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFG  263 (502)
Q Consensus       185 H~s~~~aa~~~Glg~~~v~~v~~~~-~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g  263 (502)
                      |.|+.+++.++|+   .+++|+... ++.+.+|+++||++|++...  ....+|+.|.+++..+..+||++|+++|++||
T Consensus       172 HKSv~kAliL~Gl---~Pv~V~p~~d~~~~~id~e~le~aI~e~ga--~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~g  246 (501)
T 3hl2_A          172 QKSCFKSMITAGF---EPVVIENVLEGDELRTDLKAVEAKVQELGP--DCILCIHSTTSCFAPRVPDRLEELAVICANYD  246 (501)
T ss_dssp             CHHHHHHHHHTTC---EEEEECEEEETTEEEECHHHHHHHHHHHCG--GGEEEEEEECSCCTTBCCCCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHcCC---eEEEEeeeecccccCCCHHHHHHHHHhcCC--CcEEEEEecCCCCCCcccccHHHHHHHHHHcC
Confidence            9999999999999   999887622 12589999999999987621  12233444333333457799999999999999


Q ss_pred             CEEEeecccccccccCccch-hhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcc
Q 037144          264 IWVHVDAAYAGSACICPEFR-HFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKE  342 (502)
Q Consensus       264 ~~lhVDaA~g~~~~~~~~~~-~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~  342 (502)
                      +|+|||+|||+.+.++++.. ..+. ..+||+++.|+||++.+|.+++++++++++.+...   ...|....        
T Consensus       247 IpllVDeAhGah~~~~~~lp~sA~~-~GrAD~vVqS~HK~llvpIGG~ii~~~d~e~l~~~---~~~yPGr~--------  314 (501)
T 3hl2_A          247 IPHIVNNAYGVQSSKCMHLIQQGAR-VGRIDAFVQSLDKNFMVPVGGAIIAGFNDSFIQEI---SKMYPGRA--------  314 (501)
T ss_dssp             CCEEEECTTCTTCHHHHHHHHHHHH-HSCCCEEEEEHHHHHCCCSSCEEEEESCHHHHHHH---HHTSCSCB--------
T ss_pred             CeEEEeCcchhhhhhhhhhHHHHHh-cCCCcEEEecccccceeecCceEEEeCCHHHHHHH---HHhCCCCC--------
Confidence            99999999999875543321 1111 22599999999999999999999989988765432   12232110        


Q ss_pred             cccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEecCCCeeEEEEEeecCcc
Q 037144          343 QEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK---RFEVAFPRNFSLVCFRVTPSAV  419 (502)
Q Consensus       343 ~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~---~~~l~~~~~~~~v~f~~~~~~~  419 (502)
                                   ..+.++.+|+++..+|.+||+++++++.+++++|++.|+++.   |-+++..+. |-+++.+.-..+
T Consensus       315 -------------S~Spsldl~~tLL~lGr~Gy~~ll~e~~ela~~L~~~L~~la~~~ge~ll~~~~-n~is~a~tl~~~  380 (501)
T 3hl2_A          315 -------------SASPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKKLSEAYNERLLHTPH-NPISLAMTLKTL  380 (501)
T ss_dssp             -------------CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCBCCCTT-CSSEEEEECTTS
T ss_pred             -------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhcCCCC-CceeEEEecccc
Confidence                         023568899999999999999999999999999999998742   345554332 323333322211


Q ss_pred             hhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEee--------eEC---------CEEEEEEEecCCC
Q 037144          420 MDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHA--------IVG---------GIYVLRFAAGNSM  482 (502)
Q Consensus       420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~--------~~~---------g~~~lR~~~~~~~  482 (502)
                      .                 ........++...|..+- -+|-=+++++        .+.         ...|+=++ +...
T Consensus       381 ~-----------------~~~~~~~t~~gs~Lf~r~-vsG~Rvv~~~~~~~i~g~~f~~~g~h~~~~~~~yl~~a-~aiG  441 (501)
T 3hl2_A          381 D-----------------EHRDKAVTQLGSMLFTRQ-VSGARVVPLGSMQTVSGYTFRGFMSHTNNYPCAYLNAA-SAIG  441 (501)
T ss_dssp             C-----------------TTTSCHHHHHHHHHHHTT-CCSCEEECTTCCEEETTEEESSTTTTSSCCSSCEEEEE-CCTT
T ss_pred             c-----------------ccccccHHHHHHHHHhcC-CCcceeecCCCceEECCeeecCcccCCCCCCchHHHHH-HHcC
Confidence            0                 000112233333444331 1222233322        111         12366665 3466


Q ss_pred             CcHHHHHHHHHHHHHHHHh
Q 037144          483 TMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       483 t~~~di~~~~~~l~~~~~~  501 (502)
                      .+++|||.+++.|.++..+
T Consensus       442 ~~~~~v~~~~~~l~~~~~~  460 (501)
T 3hl2_A          442 MKMQDVDLFIKRLDRCLKA  460 (501)
T ss_dssp             CCHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHH
Confidence            7888999999999988754

>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3

Probab=99.96  E-value=2e-27  Score=241.75  Aligned_cols=345  Identities=13%  Similarity=0.059  Sum_probs=235.4

Q ss_pred             ccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHH
Q 037144           79 YFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLT  158 (502)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~  158 (502)
                      |+....+.+.++. +.+.+...+..   .|  ++...++..++.+++++++|.+.+.      .+++|+|||+|+..++.
T Consensus        36 ~l~~~~~~~~~~~-v~~a~~~~~~~---~~--~~~~~~~~~~~~~~la~~~g~~~~~------~v~~t~g~t~al~~~~~  103 (393)
T 1vjo_A           36 LLLGPGPSNAHPS-VLQAMNVSPVG---HL--DPAFLALMDEIQSLLRYVWQTENPL------TIAVSGTGTAAMEATIA  103 (393)
T ss_dssp             EECSSSCCCCCHH-HHHHHSSCCCC---TT--SHHHHHHHHHHHHHHHHHHTCCCSC------EEEESSCHHHHHHHHHH
T ss_pred             eeccCCCCCCCHH-HHHHHhccccc---cc--CHHHHHHHHHHHHHHHHHhCCCCCc------EEEEeCchHHHHHHHHH
Confidence            4444333333344 55555554432   22  3446678889999999999996431      48999999999988887


Q ss_pred             HHHHHHHHHhCccCCCCeEEEeCCCCchh--HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEE
Q 037144          159 AARDRVLKKIGRENISKLVVYSSDQTHCA--FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLF  236 (502)
Q Consensus       159 ~a~~~~~~~~~~~~~~~~~v~~s~~~H~s--~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~  236 (502)
                      ++..           +++.|+++..+|++  +..+++..|+   +++.+|++.  ++.+|+++|++++++.     .+.+
T Consensus       104 ~~~~-----------~gd~Vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~l~~~-----~~~~  162 (393)
T 1vjo_A          104 NAVE-----------PGDVVLIGVAGYFGNRLVDMAGRYGA---DVRTISKPW--GEVFSLEELRTALETH-----RPAI  162 (393)
T ss_dssp             HHCC-----------TTCEEEEEESSHHHHHHHHHHHHTTC---EEEEEECCT--TCCCCHHHHHHHHHHH-----CCSE
T ss_pred             hccC-----------CCCEEEEEcCChhHHHHHHHHHHcCC---ceEEEecCC--CCCCCHHHHHHHHhhC-----CceE
Confidence            7643           56788888889998  8899999999   999999975  4689999999999862     1237


Q ss_pred             EEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeC
Q 037144          237 LCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKD  316 (502)
Q Consensus       237 Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~  316 (502)
                      |+++.++|++|.+.|+++|.++|++||+++++|++|+.+....+     +.. .++|+++.++||+++.|.++|++++++
T Consensus       163 v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~-----~~~-~~~di~~~s~sK~l~~~~~~G~l~~~~  236 (393)
T 1vjo_A          163 LALVHAETSTGARQPLEGVGELCREFGTLLLVDTVTSLGGVPIF-----LDA-WGVDLAYSCSQKGLGCSPGASPFTMSS  236 (393)
T ss_dssp             EEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTTTTSCCC-----TTT-TTCSEEECCSSSTTCSCSSCEEEEECH
T ss_pred             EEEeccCCCcceeccHHHHHHHHHHcCCEEEEECCccccCcCCc-----ccc-cCccEEEEcCcccccCCCceEEEEECH
Confidence            88899999999999999999999999999999999984432221     111 268999999999999998899999865


Q ss_pred             chhhhhhhcCC----cccccCccCCCCCcccccCCCcccccC-CCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHH
Q 037144          317 PSCLLSTLSTN----PQYLKNEATDQEPKEQEVGYKDWQITL-CRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFE  390 (502)
Q Consensus       317 ~~~l~~~~~~~----~~yl~~~~~~~~~~~~~~~~~~~~~~~-sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~  390 (502)
                      . ... .+...    ..+......    ..+..  ....... +.. .....+..+++.+..++++++.++..++++++.
T Consensus       237 ~-~~~-~~~~~~~~~~~~~~~~~~----~~~~~--~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~  308 (393)
T 1vjo_A          237 R-AIE-KLQRRRTKVANWYLDMNL----LGKYW--GSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLW  308 (393)
T ss_dssp             H-HHH-HHHTCSSCCSCSTTCHHH----HHHHH--STTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred             H-HHH-HHhccCCCCCceecCcHh----hhhhh--ccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence            4 222 22110    111110000    00000  0000111 111 122345566666555678889999999999999


Q ss_pred             HHHhcCCCeEEecCCC---eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcEEEEee
Q 037144          391 RLVTSDKRFEVAFPRN---FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKVFMTHA  466 (502)
Q Consensus       391 ~~l~~~~~~~l~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~  466 (502)
                      +.|+++ ++++..+..   .++++|.++.. .                         +  ..++.++|.++ |..+.++.
T Consensus       309 ~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~-~-------------------------~--~~~~~~~l~~~~gi~v~~g~  359 (393)
T 1vjo_A          309 ERLEDI-GLSLHVEKEYRLPTLTTVCIPDG-V-------------------------D--GKAVARRLLNEHNIEVGGGL  359 (393)
T ss_dssp             HHHHHT-TCCBSSCGGGBCSSEEEEECCTT-C-------------------------C--HHHHHHHHHHHHCEECEECC
T ss_pred             HHHHHc-CCcccCCccccCCcEEEEEcCCC-C-------------------------C--HHHHHHHHHhhCCEEEecCc
Confidence            999988 888764432   34667766321 0                         0  24567777777 86554443


Q ss_pred             eECCEEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144          467 IVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHL  499 (502)
Q Consensus       467 ~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~  499 (502)
                      ...+..++|+++..+.++++++++++++|+++.
T Consensus       360 ~~~~~~~iRis~~~~~~~~~~i~~~~~~l~~~l  392 (393)
T 1vjo_A          360 GELAGKVWRVGLMGFNSRKESVDQLIPALEQVL  392 (393)
T ss_dssp             GGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCccCChHHHHHHHHHHHHHHh
Confidence            333456899996556678889999999998875

>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*

Probab=99.96  E-value=1.3e-27  Score=241.94  Aligned_cols=318  Identities=13%  Similarity=0.091  Sum_probs=222.8

Q ss_pred             ChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh--H
Q 037144          111 SPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA--F  188 (502)
Q Consensus       111 ~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s--~  188 (502)
                      ++....+..++++++++++|.+...     ..+++|+|||+|+. ++.....           +++.|+++...|++  +
T Consensus        30 ~~~~~~~~~~~~~~la~~~~~~~~~-----~~v~~~~g~t~al~-~~~~~~~-----------~gd~vi~~~~~~~~~~~   92 (384)
T 3zrp_A           30 SKEFVEALAYSLKGLRYVMGASKNY-----QPLIIPGGGTSAME-SVTSLLK-----------PNDKILVVSNGVFGDRW   92 (384)
T ss_dssp             SHHHHHHHHHHHHHHHHHHTCCTTS-----EEEEEESCHHHHHH-HGGGGCC-----------TTCEEEEECSSHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHhCCCCCC-----cEEEEcCCcHHHHH-HHHhhcC-----------CCCEEEEecCCcchHHH
Confidence            4555778888999999999997621     15899999999998 7654422           67788888889976  6


Q ss_pred             HHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEe
Q 037144          189 QKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHV  268 (502)
Q Consensus       189 ~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhV  268 (502)
                      ...++..|+   +++.+|++.  ++.+|+++|+++|++..     +.+|+++.++|++|.+.|+++|.++|++||+++++
T Consensus        93 ~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~~-----~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~  162 (384)
T 3zrp_A           93 EQIFKRYPV---NVKVLRPSP--GDYVKPGEVEEEVRKSE-----YKLVALTHVETSTGVREPVKDVINKIRKYVELIVV  162 (384)
T ss_dssp             HHHHTTSSC---EEEEECCST--TCCCCHHHHHHHHHHSC-----EEEEEEESEETTTTEECCHHHHHHHHGGGEEEEEE
T ss_pred             HHHHHHcCC---cEEEecCCC--CCCCCHHHHHHHHHhCC-----CcEEEEeCCCCCCceECcHHHHHHHHHhcCCEEEE
Confidence            667778898   999999986  46899999999998721     45889999999999999999999999999999999


Q ss_pred             ecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhh-hc-CCcccccCccCCCCCcccccC
Q 037144          269 DAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLST-LS-TNPQYLKNEATDQEPKEQEVG  346 (502)
Q Consensus       269 DaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~-~~-~~~~yl~~~~~~~~~~~~~~~  346 (502)
                      |++|+.+....+. ..     .++|++++++||++++|.++|++++++.. +... -. ....|.....       ....
T Consensus       163 D~a~~~~~~~~~~-~~-----~~~d~~~~s~~K~~~~~~g~g~~~~~~~~-~~~~~~~~~~~~~~~~~~-------~~~~  228 (384)
T 3zrp_A          163 DGVSSVGAEEVKA-EE-----WNVDVYLTASQKALGSAAGLGLLLLSPKA-LSILDSQNSIAGYYLDLR-------NWLP  228 (384)
T ss_dssp             ECTTTTTTSCCCT-TT-----TTCSEEEEETTSTTCCCSSEEEEEECHHH-HHHHHHCCCSCCSTTCHH-------HHHH
T ss_pred             ECcccccCccccc-cc-----cCCCEEEecCcccccCCCceEEEEECHHH-HHHhcCCCCCCcccccHH-------HHHH
Confidence            9999766543321 11     16899999999999888889999886543 2221 00 0011110000       0000


Q ss_pred             -CCc----cccc-CCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC----CeeEEEEEee
Q 037144          347 -YKD----WQIT-LCRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR----NFSLVCFRVT  415 (502)
Q Consensus       347 -~~~----~~~~-~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~----~~~~v~f~~~  415 (502)
                       ...    .... ++.. .....+..++..+...+++++.++..++++++.+.|+++ ++++..++    ...+++|.+.
T Consensus       229 ~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~  307 (384)
T 3zrp_A          229 VMRGAEEGKAAYFATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIRAGLEAL-GLEIVARRPESYSNTVTGVILK  307 (384)
T ss_dssp             HHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSCSSGGGBCSSEEEEECS
T ss_pred             HHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC-CCeEccCcccccCccEEEEECC
Confidence             000    0000 0111 122345566776666778999999999999999999998 88877544    2456677764


Q ss_pred             cCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHH
Q 037144          416 PSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVV  495 (502)
Q Consensus       416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l  495 (502)
                      ...                             ..++.+.|.++|..+. +.......++|+++... ++++|++++++.|
T Consensus       308 ~~~-----------------------------~~~~~~~l~~~gi~v~-~g~~~~~~~iRi~~~~~-~~~e~i~~~~~~l  356 (384)
T 3zrp_A          308 VAD-----------------------------PQKVLAGTVNEGVEFA-PGVHPAFKYFRIGHMGW-VTPNDAIIAISVI  356 (384)
T ss_dssp             SSC-----------------------------HHHHHHHHHTTTCCCE-ECCCTTCCEEEEECCSS-CCHHHHHHHHHHH
T ss_pred             CCC-----------------------------HHHHHHHHHHCCEEEe-cCCCCCcCEEEEecccc-CCHHHHHHHHHHH
Confidence            311                             2467777888886543 32211127899998644 6778999999999


Q ss_pred             HHHHHh
Q 037144          496 QEHLEA  501 (502)
Q Consensus       496 ~~~~~~  501 (502)
                      +++.++
T Consensus       357 ~~~l~~  362 (384)
T 3zrp_A          357 ERTLRK  362 (384)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            988754

>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*

Probab=99.96  E-value=2.3e-27  Score=247.25  Aligned_cols=360  Identities=11%  Similarity=0.066  Sum_probs=240.1

Q ss_pred             cccccCCCCCC---HHHHHHHHHHhhcCCCCccccc-ChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHH
Q 037144           78 NYFAYFPATSS---VAGIVGEMLSSGFNVVGLDWIS-SPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEAL  153 (502)
Q Consensus        78 ~~~~~~~~~~~---~~~~~~~~l~~~~n~~~~~~~~-~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~  153 (502)
                      .||+....++.   ....+.+.+....+.+...|.. .+....+..++.+++++++|++.+       ..++|+|+|+++
T Consensus        69 iyld~~~~g~~p~~v~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~-------~v~~t~g~t~al  141 (465)
T 3e9k_A           69 IYFLGNSLGLQPKMVKTYLEEELDKWAKIAAYGHEVGKRPWITGDESIVGLMKDIVGANEK-------EIALMNALTVNL  141 (465)
T ss_dssp             EECBTTTSCCEETTHHHHHHHHHHHHHHHGGGGGTSSSSCGGGTTHHHHGGGHHHHTCCGG-------GEEECSCHHHHH
T ss_pred             EEecCCccCCChHHHHHHHHHHHHHHHhhCCcccccCCccHHHhHHHHHHHHHHHcCCCcC-------CEEEECCHHHHH
Confidence            46665544433   3333555554443333333332 233445666789999999999764       689999999988


Q ss_pred             HHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh----HHHHHHHcCCCCCCE-----EEEecCCCCCcccCHHHHHHHH
Q 037144          154 LCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA----FQKAAQIVGIDRKNI-----RAIKTTKSSSYGLSAESVLSQI  224 (502)
Q Consensus       154 ~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s----~~~aa~~~Glg~~~v-----~~v~~~~~~~~~~d~~~Le~~i  224 (502)
                      ..++.+...        .+.++.+|+++..+|++    +...++..|+   ++     ..+|.+  +++.+|+++|+++|
T Consensus       142 ~~~~~~~~~--------~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~---~~~~~~v~~~~~~--~~~~~d~~~l~~~i  208 (465)
T 3e9k_A          142 HLLMLSFFK--------PTPKRYKILLEAKAFPSDHYAIESQLQLHGL---NIEESMRMIKPRE--GEETLRIEDILEVI  208 (465)
T ss_dssp             HHHHHHHCC--------CCSSSCEEEEETTCCHHHHHHHHHHHHHTTC---CHHHHEEEECCCT--TCSSCCHHHHHHHH
T ss_pred             HHHHHHhcc--------ccCCCCEEEEcCCcCCchHHHHHHHHHHcCC---cceeeeEEEecCC--CCCccCHHHHHHHH
Confidence            776665532        12246678999999987    4557778898   64     334544  35799999999999


Q ss_pred             HHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCC
Q 037144          225 NLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLF  304 (502)
Q Consensus       225 ~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~  304 (502)
                      ++...   .+.+|+++.++|++|.+.|+++|.++|++||+++|+|+||+.+..+.+-.. .     ++|++++++||+++
T Consensus       209 ~~~~~---~~~lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~g~~~~~~~~-~-----~~D~~~~s~~K~l~  279 (465)
T 3e9k_A          209 EKEGD---SIAVILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHAVGNVELYLHD-W-----GVDFACWCSYKYLN  279 (465)
T ss_dssp             HHHGG---GEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHH-H-----TCCEEEECSSSTTC
T ss_pred             HhcCC---CeEEEEEeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhhcCCcCCchhh-c-----CCCEEEECcccccc
Confidence            85421   256899999999999999999999999999999999999988876654222 2     78999999999995


Q ss_pred             -CCCcceEEEeeCchhhhhhhcCCcccccCccCCCC--CcccccCCCcccccCCCC--CCchHHHHHHHHhcHHHHHHHH
Q 037144          305 -TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQE--PKEQEVGYKDWQITLCRR--FRSLKLWVVIRNFGVANLRNFI  379 (502)
Q Consensus       305 -~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~--~~~~~~~~~~~~~~~sr~--~~al~~~~~l~~~g~~g~~~~~  379 (502)
                       +|.++|+++++++.. .........|.........  .....+......++.+.+  ....++++++..+...+++++.
T Consensus       280 ~gp~~~g~l~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~~~~~~~~~~~  358 (465)
T 3e9k_A          280 AGAGGIAGAFIHEKHA-HTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEIFKQATMKALR  358 (465)
T ss_dssp             CCTTCCCEEEECGGGT-TTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred             cCCCceEEEEEcHHHH-hhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHHHHHcCHHHHH
Confidence             788889999865421 1111111111111000000  000000011112222222  2235667788877777889999


Q ss_pred             HHHHHHHHHHHHHHhcC----------CCeEEecCC----CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhH
Q 037144          380 RSHVGMAKLFERLVTSD----------KRFEVAFPR----NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTN  445 (502)
Q Consensus       380 ~~~~~la~~l~~~l~~~----------~~~~l~~~~----~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  445 (502)
                      ++..++++++.+.|+++          ++++++.+.    ..++++|++...                            
T Consensus       359 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~~~~----------------------------  410 (465)
T 3e9k_A          359 KKSVLLTGYLEYLIKHNYGKDKAATKKPVVNIITPSHVEERGCQLTITFSVP----------------------------  410 (465)
T ss_dssp             HHHHHHHHHHHHHHHHHCC---------CEEECSCSSGGGBCSCEEEEECCT----------------------------
T ss_pred             HHHHHHHHHHHHHHHhhccccccccCCCCeEEeCCCCHhhcccEEEEEecCC----------------------------
Confidence            99999999999999885          799998654    267888877521                            


Q ss_pred             HHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          446 EFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       446 ~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                        ..++.+.|.++|.++ .   ..+..++|+++++..++++||+++++.|+++.++
T Consensus       411 --~~~l~~~L~~~Gi~v-~---~~~~~~iRis~~~~~~t~edi~~~~~~l~~~l~~  460 (465)
T 3e9k_A          411 --NKDVFQELEKRGVVC-D---KRNPNGIRVAPVPLYNSFHDVYKFTNLLTSILDS  460 (465)
T ss_dssp             --TCCHHHHHHTTTEEC-E---EETTTEEEEBCCTTTCCHHHHHHHHHHHHHHHTC
T ss_pred             --HHHHHHHHHHCCEEE-e---cCCCCEEEEeCcccCCCHHHHHHHHHHHHHHHHh
Confidence              124667777788643 2   3345689999866778889999999999998753

>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*

Probab=99.96  E-value=1.4e-26  Score=237.94  Aligned_cols=341  Identities=13%  Similarity=0.129  Sum_probs=232.0

Q ss_pred             CcccccCCCCCCHHHHHHHHHHhhcC--CC-C---c-ccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCc
Q 037144           77 PNYFAYFPATSSVAGIVGEMLSSGFN--VV-G---L-DWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTT  149 (502)
Q Consensus        77 p~~~~~~~~~~~~~~~~~~~l~~~~n--~~-~---~-~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~gg  149 (502)
                      ..|+++..+++.++. +.+.+...+.  .. .   . .+..+....+...++.+++++++|.+.+       .+++|+||
T Consensus        23 ~iyld~~~~~~~~~~-v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~-------~v~~~~gg   94 (423)
T 3lvm_A           23 PIYLDYSATTPVDPR-VAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPR-------EIVFTSGA   94 (423)
T ss_dssp             SEECBTTTCCCCCHH-HHHHHTTSSSTTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCGG-------GEEEESSH
T ss_pred             CEeecCCCcCCCCHH-HHHHHHHHHhhcccccCCCccccchhHHHHHHHHHHHHHHHHHcCCCCC-------eEEEeCCh
Confidence            357777665555444 4455554443  11 1   1 2333445567788899999999999754       58999999


Q ss_pred             hHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc---CCCCCCEEEEecCCCCCcccCHHHHHHHHHH
Q 037144          150 CEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV---GIDRKNIRAIKTTKSSSYGLSAESVLSQINL  226 (502)
Q Consensus       150 t~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~---Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~  226 (502)
                      |+|+..++.+.++.+.+       +++.|+++...|.++..++..+   |+   +++.+|+++  ++.+|+++|+++|++
T Consensus        95 t~a~~~a~~~l~~~~~~-------~gd~Vl~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~  162 (423)
T 3lvm_A           95 TESDNLAIKGAANFYQK-------KGKHIITSKTEHKAVLDTCRQLEREGF---EVTYLAPQR--NGIIDLKELEAAMRD  162 (423)
T ss_dssp             HHHHHHHHHHHHHHHTT-------TCCEEEEETTSCHHHHHHHHHHHHTTC---EEEEECCCT--TSCCCHHHHHHHCCT
T ss_pred             HHHHHHHHHHHHHhhcc-------CCCEEEECCccchHHHHHHHHHHHcCC---EEEEeccCC--CCccCHHHHHHhcCC
Confidence            99999998877653211       4678999999999998887555   88   999999886  568999999999865


Q ss_pred             HHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC
Q 037144          227 DVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT  306 (502)
Q Consensus       227 ~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p  306 (502)
                      +      +.+|+++.++|++|.+.|+++|+++|++||+++++|++|+.+....+.. .     .++|++++++||++ +|
T Consensus       163 ~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~-~-----~~~di~~~s~sK~~-g~  229 (423)
T 3lvm_A          163 D------TILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKLPIDLS-Q-----LKVDLMSFSGHKIY-GP  229 (423)
T ss_dssp             T------EEEEECCSBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCTT-T-----SCCSEEEEESTTTT-SC
T ss_pred             C------cEEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEEhhhhcCCCCcChh-h-----cCCCEEEechHHhc-CC
Confidence            3      4588899999999999999999999999999999999998765533211 1     16899999999965 56


Q ss_pred             CcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccC-CCC-CCchHHHHHHHHhcHHHHHHHHHHHHH
Q 037144          307 LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITL-CRR-FRSLKLWVVIRNFGVANLRNFIRSHVG  384 (502)
Q Consensus       307 ~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~-sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~  384 (502)
                      .++|++++++... . .+   ..+.......            ..... +.. .....+..+++.+ .+.++++.++..+
T Consensus       230 ~g~G~~~~~~~~~-~-~~---~~~~~~~~~~------------~~~~~~~~~~~~~~a~~~al~~~-~~~~~~~~~~~~~  291 (423)
T 3lvm_A          230 KGIGALYVRRKPR-V-RI---EAQMHGGGHE------------RGMRSGTLPVHQIVGMGEAYRIA-KEEMATEMERLRG  291 (423)
T ss_dssp             SSCEEEEECBTTB-C-CC---CCSSCSSCTT------------TTTCCSCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHH
T ss_pred             CCeEEEEEecccc-C-CC---CccccCCccc------------ccccCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence            6799998875421 1 11   1111110000            00000 101 1112333444443 3347889999999


Q ss_pred             HHHHHHHHHhcCCCeEEecCCC---eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcE
Q 037144          385 MAKLFERLVTSDKRFEVAFPRN---FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKV  461 (502)
Q Consensus       385 la~~l~~~l~~~~~~~l~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~  461 (502)
                      +++++.+.|+++|++++..++.   .++++|.+....                             ...+.+.|.+   +
T Consensus       292 ~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~l~~~l~~---i  339 (423)
T 3lvm_A          292 LRNRLWNGIKDIEEVYLNGDLEHGAPNILNVSFNYVE-----------------------------GESLIMALKD---L  339 (423)
T ss_dssp             HHHHHHHHHTTSTTEEEESCSTTBCTTEEEEEETTSC-----------------------------HHHHHHHTTT---E
T ss_pred             HHHHHHHHHhcCCCEEEeCCccccCCCeEEEEeCCCC-----------------------------HHHHHHHHhh---h
Confidence            9999999999999999986543   357777773221                             2244555443   3


Q ss_pred             EEEeeeE---------------C-----CEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          462 FMTHAIV---------------G-----GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       462 ~~~~~~~---------------~-----g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      .+.++..               .     ...++|+++. ..++++||+++++.|+++.++
T Consensus       340 ~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~-~~~t~e~i~~~~~~l~~~~~~  398 (423)
T 3lvm_A          340 AVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLG-RFTTEEEIDYTIELVRKSIGR  398 (423)
T ss_dssp             ECBCCCC-----CCCCHHHHHHTCCHHHHHTEEEEECC-TTCCHHHHHHHHHHHHHHHHH
T ss_pred             eeccCccccCCCccccHHHHHhCCCccccCceEEEECC-CCCCHHHHHHHHHHHHHHHHH
Confidence            3332211               0     0368999986 556778999999999988754

>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}

Probab=99.95  E-value=5.9e-28  Score=242.47  Aligned_cols=342  Identities=12%  Similarity=0.065  Sum_probs=229.7

Q ss_pred             ccccCCCCCCHHHHHHHHHHhhc-CCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHH
Q 037144           79 YFAYFPATSSVAGIVGEMLSSGF-NVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTL  157 (502)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~l~~~~-n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al  157 (502)
                      ++.+.+++..+|..+.+.+...+ +.....+..++...++.+++.+++++++|.++..      .+++|+|||+|+..++
T Consensus         5 ~~~~~p~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~------~v~~~~g~t~al~~~~   78 (362)
T 3ffr_A            5 KIYFTPGPSELYPTVRQHMITALDEKIGVISHRSKKFEEVYKTASDNLKTLLELPSNY------EVLFLASATEIWERII   78 (362)
T ss_dssp             CEEECSSSCCCCTTHHHHHHHHHHTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTE------EEEEESCHHHHHHHHH
T ss_pred             ceeccCCCcCCCHHHHHHHHHHhcCCccCcCCCCHHHHHHHHHHHHHHHHHhCCCCCc------EEEEeCCchHHHHHHH
Confidence            45566665555544554444433 3321122356777888899999999999986432      6899999999998777


Q ss_pred             HHHHHHHHHHhCccCCCCeEEEeCCCCchh--HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccE
Q 037144          158 TAARDRVLKKIGRENISKLVVYSSDQTHCA--FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPL  235 (502)
Q Consensus       158 ~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s--~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~  235 (502)
                      .+...           +  .+++....|++  +...++..|+   +++.++.+.  ++.+|+++|+  +++      ++.
T Consensus        79 ~~l~~-----------~--~~i~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~--~~~------~~~  132 (362)
T 3ffr_A           79 QNCVE-----------K--KSFHCVNGSFSKRFYEFAGELGR---EAYKEEAAF--GKGFYPADIT--VPA------DAE  132 (362)
T ss_dssp             HHHCS-----------S--EEEEEECSHHHHHHHHHHHHTTC---EEEEEECCT--TCCCCGGGCC--CCT------TCC
T ss_pred             HhccC-----------C--cEEEEcCcHHHHHHHHHHHHhCC---CeEEEecCC--CCCCCHHHHh--ccC------Ccc
Confidence            66532           3  34444456665  4456778899   999999875  4689999998  332      245


Q ss_pred             EEEEecCCccccccCChhHHHHHHHHh-CCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEe
Q 037144          236 FLCATVGTTAITAVDPLKPLCDVAKQF-GIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWV  314 (502)
Q Consensus       236 ~Vv~t~gtt~~G~idpl~eI~~i~~~~-g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~  314 (502)
                      +|++++++|++|.+.|+++|+++|++| |+|+|+|++|+.+....+        +..+|+++.++|||+++|.|+|++++
T Consensus       133 ~v~~~~~~nptG~~~~l~~i~~la~~~p~~~li~D~a~~~~~~~~~--------~~~~d~~~~s~~K~~~~~~G~g~~~~  204 (362)
T 3ffr_A          133 IICLTHNETSSGVSMPVEDINTFRDKNKDALIFVDAVSSLPYPKFD--------WTKIDSVFFSVQKCFGLPAGLGVWIL  204 (362)
T ss_dssp             EEEEESEETTTTEECCHHHHTTSGGGSTTSEEEEECTTTTTSSCCC--------TTSCSEEEEETTSTTCCCSCCEEEEE
T ss_pred             EEEEEcCCCCcceeCCHHHHHHHHHhCCCCEEEEecccccCCcccC--------hhHCcEEEEecccccCCCCceEEEEE
Confidence            888899999999999999999999999 999999999976544322        12489999999999998888999887


Q ss_pred             eCchhhhhhhcCC-----cccccCccCCCCCcccccC-CCcccccCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHH
Q 037144          315 KDPSCLLSTLSTN-----PQYLKNEATDQEPKEQEVG-YKDWQITLCRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAK  387 (502)
Q Consensus       315 r~~~~l~~~~~~~-----~~yl~~~~~~~~~~~~~~~-~~~~~~~~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~  387 (502)
                      ++.. ........     ..|.....       ...+ ........+.. .....+..+++.+..++++++.++..++++
T Consensus       205 ~~~~-~~~~~~~~~gg~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~  276 (362)
T 3ffr_A          205 NDRV-IEKSKALLAKRKSIGTYHTIP-------SMLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAA  276 (362)
T ss_dssp             EHHH-HHHHHHHHHTTCCCCSTTSHH-------HHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred             CHHH-HHHhhhccccCCCCcccccHH-------HHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHH
Confidence            6542 21111100     11110000       0000 00000001111 122345566666666678999999999999


Q ss_pred             HHHHHHhcCCCeEEecCC----CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEE
Q 037144          388 LFERLVTSDKRFEVAFPR----NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFM  463 (502)
Q Consensus       388 ~l~~~l~~~~~~~l~~~~----~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~  463 (502)
                      ++.+.|+++|+++++.+.    ...+++|.+.. .                             ..++.+.|.++|..+.
T Consensus       277 ~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~-~-----------------------------~~~~~~~l~~~gi~~~  326 (362)
T 3ffr_A          277 LINTYIESSKVFSFGVEDAKLRSMTTIVANTTM-L-----------------------------PGEINKILEPFDMAVG  326 (362)
T ss_dssp             HHHHHHHHCSSEEESSSCGGGBCSSEEEEEESS-C-----------------------------HHHHHHHHGGGTEEEE
T ss_pred             HHHHHHHHccCceeccCChhhcCCceEEEecCC-C-----------------------------HHHHHHHHHHCCeEEe
Confidence            999999999999987522    24566776643 1                             3467888888886554


Q ss_pred             EeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144          464 THAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHL  499 (502)
Q Consensus       464 ~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~  499 (502)
                      ++....+..++|++++. .+++++|++++++|+++.
T Consensus       327 ~g~~~~~~~~iRis~~~-~~~~e~i~~l~~~l~~~~  361 (362)
T 3ffr_A          327 AGYGSKKETQIRIANFP-AHSLEQVHKLVQTLKEKI  361 (362)
T ss_dssp             ECSGGGTTTEEEEECCT-TSCHHHHHHHHHHHHHHT
T ss_pred             cCccccCCCEEEEECCC-CCCHHHHHHHHHHHHHHh
Confidence            43222345689999875 467789999999998864

>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3

Probab=99.95  E-value=3.4e-27  Score=236.14  Aligned_cols=334  Identities=14%  Similarity=0.014  Sum_probs=225.8

Q ss_pred             CCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHH
Q 037144           84 PATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDR  163 (502)
Q Consensus        84 ~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~  163 (502)
                      +++..++..+.+.+...+..     ..++.......++++++++++|.+.+       .+++|+|||+|+..++.+... 
T Consensus         7 ~~p~~~~~~v~~a~~~~~~~-----~~~~~~~~~~~~l~~~la~~~g~~~~-------~i~~~~g~t~a~~~~~~~~~~-   73 (352)
T 1iug_A            7 PGPVRLHPKALEALARPQLH-----HRTEAAREVFLKARGLLREAFRTEGE-------VLILTGSGTLAMEALVKNLFA-   73 (352)
T ss_dssp             SSSCCCCHHHHHHHHSCCCC-----TTSHHHHHHHHHHHHHHHHHHTCSSE-------EEEEESCHHHHHHHHHHHHCC-
T ss_pred             CCCCCCCHHHHHHhccCCCC-----ccCHHHHHHHHHHHHHHHHHhCCCCc-------eEEEcCchHHHHHHHHHhccC-
Confidence            44444445566666665542     13455666777899999999998743       589999999999888877632 


Q ss_pred             HHHHhCccCCCCeEEEeCCCCchhHH--HHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEec
Q 037144          164 VLKKIGRENISKLVVYSSDQTHCAFQ--KAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATV  241 (502)
Q Consensus       164 ~~~~~~~~~~~~~~v~~s~~~H~s~~--~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~  241 (502)
                                +++.|+++..+|++..  +.++..|+   +++.+|+++  ++.+|+++|++   +      .+.+|+++.
T Consensus        74 ----------~gd~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~---~------~~~~v~~~~  129 (352)
T 1iug_A           74 ----------PGERVLVPVYGKFSERFYEIALEAGL---VVERLDYPY--GDTPRPEDVAK---E------GYAGLLLVH  129 (352)
T ss_dssp             ----------TTCEEEEEECSHHHHHHHHHHHHTTC---EEEEEECCT--TCCCCTTTSCC---S------SCSEEEEES
T ss_pred             ----------CCCeEEEEeCCchhHHHHHHHHHcCC---ceEEEeCCC--CCCCCHHHHhc---c------CCcEEEEEE
Confidence                      5678888888999864  45566798   999999975  45899998877   1      234788899


Q ss_pred             CCccccccCChhHHHHHHHHh--CCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchh
Q 037144          242 GTTAITAVDPLKPLCDVAKQF--GIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSC  319 (502)
Q Consensus       242 gtt~~G~idpl~eI~~i~~~~--g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~  319 (502)
                      ++|++|.+.|+++|.++|++|  |+|+|+|++|+.+....+ ....     ++|+++.++|||+++|.|+|++++++.. 
T Consensus       130 ~~nptG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~-~~~~-----~~d~~~~s~~K~~~~~~g~G~~~~~~~~-  202 (352)
T 1iug_A          130 SETSTGALADLPALARAFKEKNPEGLVGADMVTSLLVGEVA-LEAM-----GVDAAASGSQKGLMCPPGLGFVALSPRA-  202 (352)
T ss_dssp             EETTTTEECCHHHHHHHHHHHCTTCEEEEECTTTBTTBCCC-SGGG-----TCSEEEEESSSTTCCCSCEEEEEECHHH-
T ss_pred             ecCCcceecCHHHHHHHHHhhCCCCEEEEECCccccCccee-cccc-----CeeEEEecCcccccCCCceeEEEECHHH-
Confidence            999999999999999999999  999999999975543322 1111     5899999999999999899999886542 


Q ss_pred             hhhhhcCCcccccCccCCCCCcccccC-CCcccccCCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 037144          320 LLSTLSTNPQYLKNEATDQEPKEQEVG-YKDWQITLCRRF-RSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK  397 (502)
Q Consensus       320 l~~~~~~~~~yl~~~~~~~~~~~~~~~-~~~~~~~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~  397 (502)
                      +. .+.. ..|.....       .... .......++... ....+..++..+... ++++.++..++++++.+.|+++ 
T Consensus       203 ~~-~~~~-~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~-~~~~~~~~~~~~~~l~~~L~~~-  271 (352)
T 1iug_A          203 LE-RLKP-RGYYLDLA-------RELKAQKEGESAWTPAINLVLAVAAVLEEVLPR-LEEHLALKAWQNALLYGVGEEG-  271 (352)
T ss_dssp             HH-TCCC-CSSTTCHH-------HHHHHHTTTCCSSCCCHHHHHHHHHHHHHHGGG-HHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             HH-HhhC-CCceeeHH-------HHHhhcccCCCCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHC-
Confidence            22 1111 11100000       0000 000000011111 112344555554444 7889999999999999999998 


Q ss_pred             CeEEecCC-CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEE
Q 037144          398 RFEVAFPR-NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRF  476 (502)
Q Consensus       398 ~~~l~~~~-~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~  476 (502)
                      ++++..++ ..++++|+++.. .                         +  ..++.++|.++|..+..+....+..++|+
T Consensus       272 g~~~~~~~~~~~~~~~~~~~~-~-------------------------~--~~~~~~~l~~~gi~v~~~~~~~~~~~iRi  323 (352)
T 1iug_A          272 GLRPVPKRFSPAVAAFYLPEG-V-------------------------P--YARVKEAFAQRGAVIAGGQGPLKGKVFRL  323 (352)
T ss_dssp             TCEESCSSBCTTCEEEECCTT-C-------------------------C--HHHHHHHHHTTTEECEECCGGGTTTEEEE
T ss_pred             CCcccccccCCeEEEEEcCCC-C-------------------------C--HHHHHHHHHHCCEEEEeCCCccCCCEEEE
Confidence            89887543 455777776421 1                         0  24577778888864433321123468999


Q ss_pred             EecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          477 AAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       477 ~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      +++. .++++++++++++|+++.++
T Consensus       324 ~~~~-~~~~~~i~~~~~~l~~~~~~  347 (352)
T 1iug_A          324 SLMG-AYDRYEALGVAGMFREVLEE  347 (352)
T ss_dssp             CCCS-SCCHHHHHHHHHHHHHHHHH
T ss_pred             Eccc-cCCHHHHHHHHHHHHHHHHH
Confidence            9864 46677999999999988764

>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3

Probab=99.95  E-value=1.8e-26  Score=236.55  Aligned_cols=357  Identities=12%  Similarity=0.049  Sum_probs=232.1

Q ss_pred             cccccCCCCCCHHHHHHHHHHhhcCC---C-C-cccccChhhHHHHHHHHHHHHHhcCC-CCccCcCCCCcEEEcCCchH
Q 037144           78 NYFAYFPATSSVAGIVGEMLSSGFNV---V-G-LDWISSPAAVELENIVMDWLGQMLDL-PKSFLFSGNGGGVIQGTTCE  151 (502)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~l~~~~n~---~-~-~~~~~~p~~~~le~~~~~~l~~l~g~-~~~~~~~~~~~g~~t~ggt~  151 (502)
                      .||++...++.++. +.+.+...+..   + . ..+..++.......++.+++++++|. +..       .+++|+|||+
T Consensus        30 i~l~~~~~~~~~~~-v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~~~~~~~-------~v~~~~g~t~  101 (420)
T 1t3i_A           30 VYLDNAATSQKPRA-VLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFINARSPR-------EIVYTRNATE  101 (420)
T ss_dssp             EECBTTTCCCCCHH-HHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTTCSCGG-------GEEEESSHHH
T ss_pred             EEecCCccCCCCHH-HHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHcCCCCCC-------eEEEcCChHH
Confidence            35665544443444 44444444422   1 1 11222222345566788899999998 433       6899999999


Q ss_pred             HHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh----HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHH
Q 037144          152 ALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA----FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLD  227 (502)
Q Consensus       152 a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s----~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~  227 (502)
                      |+..++.+++....       .+++.|+++..+|.+    +...++..|+   +++.+|++.  ++.+|+++|+++|+++
T Consensus       102 a~~~~~~~~~~~~~-------~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~l~~~  169 (420)
T 1t3i_A          102 AINLVAYSWGMNNL-------KAGDEIITTVMEHHSNLVPWQMVAAKTGA---VLKFVQLDE--QESFDLEHFKTLLSEK  169 (420)
T ss_dssp             HHHHHHHHTHHHHC-------CTTCEEEEETTCCGGGTHHHHHHHHHHCC---EEEEECBCT--TSSBCHHHHHHHCCTT
T ss_pred             HHHHHHHHhhhccc-------CCCCEEEECcchhHHHHHHHHHHHHhcCc---EEEEeccCC--CCCcCHHHHHHhhCCC
Confidence            99988887742101       156788889999988    6677888999   999999974  5789999999998643


Q ss_pred             HhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC
Q 037144          228 VEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL  307 (502)
Q Consensus       228 ~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~  307 (502)
                            +.+|+++.++|++|.+.|+++|.++|++||+|+|+|++|+.+....+ ....     +.|+++.++||.+ +|.
T Consensus       170 ------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~-~~~~-----~~di~~~s~sK~~-~~~  236 (420)
T 1t3i_A          170 ------TKLVTVVHISNTLGCVNPAEEIAQLAHQAGAKVLVDACQSAPHYPLD-VQLI-----DCDWLVASGHKMC-APT  236 (420)
T ss_dssp             ------EEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCC-HHHH-----TCSEEEEEGGGTT-SCT
T ss_pred             ------ceEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEEhhhccCCccCc-hhhc-----CCCEEEEehhhhc-CCC
Confidence                  45888999999999999999999999999999999999987654322 2222     5899999999955 566


Q ss_pred             cceEEEeeCchhhhhhhcCC-cccccCccCCCCCcccccCCCcccccCCCC-C-CchHHHHHHHHhcHHHHHHHHHHHHH
Q 037144          308 DCCCLWVKDPSCLLSTLSTN-PQYLKNEATDQEPKEQEVGYKDWQITLCRR-F-RSLKLWVVIRNFGVANLRNFIRSHVG  384 (502)
Q Consensus       308 ~~g~~~~r~~~~l~~~~~~~-~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~-~-~al~~~~~l~~~g~~g~~~~~~~~~~  384 (502)
                      |+|++++++ .... .+... ..+.......  .....+......+..+.. . ..++++.+++.+...++.++.++..+
T Consensus       237 g~G~~~~~~-~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~  312 (420)
T 1t3i_A          237 GIGFLYGKE-EILE-AMPPFFGGGEMIAEVF--FDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVE  312 (420)
T ss_dssp             TCEEEEECH-HHHH-HSCCCSCSTTSEEEEC--SSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred             ceEEEEEch-HHHh-hcCceecCCCcccccc--ccccCCCCchhhccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence            788888764 3322 22111 0000000000  000000000111111111 1 11233335666655678889999999


Q ss_pred             HHHHHHHHHhcCCCeEEecCC-----CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcC
Q 037144          385 MAKLFERLVTSDKRFEVAFPR-----NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSG  459 (502)
Q Consensus       385 la~~l~~~l~~~~~~~l~~~~-----~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g  459 (502)
                      +++++.+.|+++|+++++.+.     ..++++|.+++..                             ..++.+.+.+.|
T Consensus       313 ~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~l~~~g  363 (420)
T 1t3i_A          313 LTHYLWQGLGQIPQLRLYGPNPKHGDRAALASFNVAGLH-----------------------------ASDVATMVDQDG  363 (420)
T ss_dssp             HHHHHHHHHHTCTTEEEESCCGGGSCBCSEEEEEETTBC-----------------------------HHHHHHHHHTTT
T ss_pred             HHHHHHHHHHhCCCeEEeCCCccccccCCEEEEEECCCC-----------------------------HHHHHHHHHHCC
Confidence            999999999999899988654     3678888753210                             235667777778


Q ss_pred             cEEEEee-------eECC-EEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          460 KVFMTHA-------IVGG-IYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       460 ~~~~~~~-------~~~g-~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      ..+..+.       ...+ ..++|+++. ..++++|+++++++|+++.+.
T Consensus       364 i~v~~~~~~~~~~~~~~g~~~~iRis~~-~~~~~~~i~~~~~~l~~~~~~  412 (420)
T 1t3i_A          364 IAIRSGHHCTQPLHRLFDASGSARASLY-FYNTKEEIDLFLQSLQATIRF  412 (420)
T ss_dssp             EECBCSCTTCHHHHHHTTCCCCEEEECC-TTCCHHHHHHHHHHHHHHHHH
T ss_pred             eEEeeccccchHHHHhcCCCCeEEEecC-CCCCHHHHHHHHHHHHHHHHH
Confidence            6433221       1112 568999986 446778999999999988764

>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*

Probab=99.95  E-value=9.6e-27  Score=236.90  Aligned_cols=353  Identities=12%  Similarity=0.065  Sum_probs=233.5

Q ss_pred             CCcccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHH
Q 037144           76 SPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLC  155 (502)
Q Consensus        76 ~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~  155 (502)
                      .++.+.+.+++..++..+.+.+...+..   .|  ++.......++++++++++|.+.+.      .+++|+|||+++..
T Consensus        16 ~~~~~~~~~~p~~~~~~v~~a~~~~~~~---~~--~~~~~~~~~~l~~~la~~~~~~~~~------~v~~~~g~t~al~~   84 (396)
T 2ch1_A           16 IPEKIMMGPGPSNCSKRVLTAMTNTVLS---NF--HAELFRTMDEVKDGLRYIFQTENRA------TMCVSGSAHAGMEA   84 (396)
T ss_dssp             CCCCBCCSSSSCCCCHHHHHHTTSCCCC---TT--CHHHHHHHHHHHHHHHHHHTCCCSC------EEEESSCHHHHHHH
T ss_pred             CCcceeecCCCCCCCHHHHHHhcccccc---CC--ChhHHHHHHHHHHHHHHHhCCCCCc------EEEECCcHHHHHHH
Confidence            4555666665555555565655544422   23  3444556678889999999987531      47899999999988


Q ss_pred             HHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH--HHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCc
Q 037144          156 TLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ--KAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELI  233 (502)
Q Consensus       156 al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~--~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~  233 (502)
                      ++.+...           +++.|+++..+|.+..  +.++..|+   +++.+|+++  ++.+|+++|++++++..     
T Consensus        85 ~~~~~~~-----------~gd~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~l~~~~-----  143 (396)
T 2ch1_A           85 MLSNLLE-----------EGDRVLIAVNGIWAERAVEMSERYGA---DVRTIEGPP--DRPFSLETLARAIELHQ-----  143 (396)
T ss_dssp             HHHHHCC-----------TTCEEEEEESSHHHHHHHHHHHHTTC---EEEEEECCT--TSCCCHHHHHHHHHHHC-----
T ss_pred             HHHHhcC-----------CCCeEEEEcCCcccHHHHHHHHHcCC---ceEEecCCC--CCCCCHHHHHHHHHhCC-----
Confidence            8776632           5678888888998874  57788999   999999975  46899999999998621     


Q ss_pred             cEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEE
Q 037144          234 PLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLW  313 (502)
Q Consensus       234 p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~  313 (502)
                      +.+|+++.++|++|.+.|+++|.++|++||+++++|++|+.+....+     +... ++|+++.++||+++.|.++|+++
T Consensus       144 ~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~Dea~~~g~~~~~-----~~~~-~~d~~~~s~~K~~~~~~g~g~~~  217 (396)
T 2ch1_A          144 PKCLFLTHGDSSSGLLQPLEGVGQICHQHDCLLIVDAVASLCGVPFY-----MDKW-EIDAVYTGAQKVLGAPPGITPIS  217 (396)
T ss_dssp             CSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCC-----TTTT-TCCEEECCCC-CCCCCSSCEEEE
T ss_pred             CCEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEEccccccCCccc-----hhhc-CcCEEEEcCCccccCCCCeEEEE
Confidence            23788899999999999999999999999999999999985433221     1111 57999999999999998999888


Q ss_pred             eeCchhhhhhhcCC----cccccCccCCCCCcccccCC--CcccccCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHH
Q 037144          314 VKDPSCLLSTLSTN----PQYLKNEATDQEPKEQEVGY--KDWQITLCRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMA  386 (502)
Q Consensus       314 ~r~~~~l~~~~~~~----~~yl~~~~~~~~~~~~~~~~--~~~~~~~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la  386 (502)
                      +++. .+. .+...    ..+.......    ...+..  ......++.. .....+..+++.+..++++++.++..+++
T Consensus       218 ~~~~-~~~-~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~  291 (396)
T 2ch1_A          218 ISPK-ALD-VIRNRRTKSKVFYWDLLLL----GNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECA  291 (396)
T ss_dssp             ECHH-HHH-HHHTCSSCCSCGGGCHHHH----HHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred             ECHH-HHH-hhhhccCcccceEechHHH----HHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            8653 322 22111    1111110000    000000  0000001111 11234445666555577889999999999


Q ss_pred             HHHHHHHhcCCCeEEecCCC---e-eEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcE
Q 037144          387 KLFERLVTSDKRFEVAFPRN---F-SLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKV  461 (502)
Q Consensus       387 ~~l~~~l~~~~~~~l~~~~~---~-~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~  461 (502)
                      +++.+.|+++ |++++.+..   . .+++|+++.. .                         +  ..++.++|.++ |..
T Consensus       292 ~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~-~-------------------------~--~~~~~~~L~~~~gi~  342 (396)
T 2ch1_A          292 QILYEGLGKM-GLDIFVKDPRHRLPTVTGIMIPKG-V-------------------------D--WWKVSQYAMNNFSLE  342 (396)
T ss_dssp             HHHHHHHHHH-TCCBSSCSGGGBCTTEEEEECCTT-C-------------------------C--HHHHHHHHHHHHCBC
T ss_pred             HHHHHHHHHC-CCeeccCCccccCCceEEEEcCCC-C-------------------------C--HHHHHHHHHHhCCEE
Confidence            9999999988 888764332   1 2667766321 1                         0  23566666654 765


Q ss_pred             EEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          462 FMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       462 ~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      +..+....+..++|++++.+.++++++++++++|+++.++
T Consensus       343 v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~l~~  382 (396)
T 2ch1_A          343 VQGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGFKESLKA  382 (396)
T ss_dssp             CBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred             EecCccccCCCEEEEECCCCcCCHHHHHHHHHHHHHHHHH
Confidence            4322212234689999865667888999999999988754

>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}

Probab=99.95  E-value=3e-26  Score=231.56  Aligned_cols=339  Identities=9%  Similarity=-0.032  Sum_probs=223.7

Q ss_pred             CCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHH
Q 037144           83 FPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARD  162 (502)
Q Consensus        83 ~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~  162 (502)
                      .+++..+|..+.+.+...+..   .  .++...++..++.+++++++|.+...     ...++|+|||+|+..++.+...
T Consensus        24 ~pgp~~~~~~v~~a~~~~~~~---~--~~~~~~~~~~~~~~~la~~~g~~~~~-----~~i~~~~ggt~al~~~~~~~~~   93 (376)
T 3f0h_A           24 TVGPVMSSEEVRAIGAEQVPY---F--RTTEFSSTMLENEKFMLEYAKAPEGS-----KAVFMTCSSTGSMEAVVMNCFT   93 (376)
T ss_dssp             SSSSCCCCHHHHHHHTSCCCC---C--SSHHHHHHHHHHHHHHHHHHTCCTTC-----EEEEESSCHHHHHHHHHHHHCC
T ss_pred             cCCCCCCcHHHHHHhcCCCCC---C--CCHHHHHHHHHHHHHHHHHhCCCCCc-----eEEEEcCChhHHHHHHHHhccC
Confidence            445545555555555543321   1  24566678888999999999997532     1344588999999888776643


Q ss_pred             HHHHHhCccCCCCeEEEeCCCCchhH--HHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEe
Q 037144          163 RVLKKIGRENISKLVVYSSDQTHCAF--QKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCAT  240 (502)
Q Consensus       163 ~~~~~~~~~~~~~~~v~~s~~~H~s~--~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t  240 (502)
                                 +++.|+++...+++.  ...+...|+   +++.+|++.  ++.+|+++|+++++++      +.+|+++
T Consensus        94 -----------~gd~vi~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~~~~~------~~~v~~~  151 (376)
T 3f0h_A           94 -----------KKDKVLVIDGGSFGHRFVQLCEIHEI---PYVALKLEH--GKKLTKEKLYEYDNQN------FTGLLVN  151 (376)
T ss_dssp             -----------TTCCEEEEESSHHHHHHHHHHHHTTC---CEEEEECCT--TCCCCHHHHHTTTTSC------CCEEEEE
T ss_pred             -----------CCCeEEEEeCChhhHHHHHHHHHcCC---ceEEEeCCC--CCCCCHHHHHHhhccC------ceEEEEe
Confidence                       556666666555553  345677888   999999875  4689999999876433      3478888


Q ss_pred             cCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhh
Q 037144          241 VGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCL  320 (502)
Q Consensus       241 ~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l  320 (502)
                      .++|++|.+.|+++|+++|++||+++|+|++++.+....+ ....     ++|++++++||++++|.|+|++++++.. .
T Consensus       152 ~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~-~~~~-----~~d~~~~s~~K~l~~~~G~g~~~~~~~~-~  224 (376)
T 3f0h_A          152 VDETSTAVLYDTMMIGEFCKKNNMFFVCDCVSAFLADPFN-MNEC-----GADVMITGSQKVLACPPGISVIVLAPRG-V  224 (376)
T ss_dssp             SEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSCCC-HHHH-----TCSEEEEETTTTTCCCSSCEEEEECHHH-H
T ss_pred             cccCCcceecCHHHHHHHHHHcCCEEEEEcCccccCcccc-cccc-----CccEEEecCcccccCCCceEEEEECHHH-H
Confidence            8999999999999999999999999999999987655432 1111     5899999999999988889998776542 2


Q ss_pred             hhhhc-CCcccccCccCCCCCcccccCCCcccccCCCC--CCc---hHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHH
Q 037144          321 LSTLS-TNPQYLKNEATDQEPKEQEVGYKDWQITLCRR--FRS---LKLWVVIRNFGVA-NLRNFIRSHVGMAKLFERLV  393 (502)
Q Consensus       321 ~~~~~-~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~--~~a---l~~~~~l~~~g~~-g~~~~~~~~~~la~~l~~~l  393 (502)
                      ..... ....+......       ..   ......+..  ...   .++..+++.+..+ +++++.++..++++++.+.|
T Consensus       225 ~~~~~~~~~~~~~~~~~-------~~---~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L  294 (376)
T 3f0h_A          225 ERVEKSKVRTMYFDLKD-------AL---KNQERGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQAADFRAKI  294 (376)
T ss_dssp             HHHHTCCCCCSTTCHHH-------HH---HHHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHhhcCCCCceeecHHH-------HH---hhcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence            22211 11111110000       00   000000111  111   3455666666555 68899999999999999999


Q ss_pred             hcCCCeEEecCCCee-EEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcEEEEeeeECCE
Q 037144          394 TSDKRFEVAFPRNFS-LVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKVFMTHAIVGGI  471 (502)
Q Consensus       394 ~~~~~~~l~~~~~~~-~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~g~  471 (502)
                      +++ ++++..+...+ ++++..  .+.                           ...++.+.|.++ |..+.++....+.
T Consensus       295 ~~~-~~~~~~~~~~~~~~~~~~--~~~---------------------------~~~~l~~~l~~~~gi~v~~g~~~~~~  344 (376)
T 3f0h_A          295 KDL-PFELVSESPANGVTSVHP--TTA---------------------------NAYDIFLKLKDEYGIWICPNGGEMKD  344 (376)
T ss_dssp             TTS-SEEECCSSBBTTEEEEEE--SSS---------------------------CHHHHHHHHHHHSSEECEECCGGGTT
T ss_pred             HHc-CCccCccccCceEEEEeC--CCC---------------------------CHHHHHHHHHHhCCEEEecCccccCC
Confidence            988 68876543333 334432  211                           024677778777 7544333212234


Q ss_pred             EEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          472 YVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       472 ~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      .++|+++.. .++++++++++++|+++.++
T Consensus       345 ~~lRis~~~-~~t~e~i~~~~~~l~~~l~~  373 (376)
T 3f0h_A          345 TIFRVGHIG-ALTHEDNTTLVNAFKDLQKR  373 (376)
T ss_dssp             TCEEEECCS-SCCHHHHHHHHHHHHHHHHT
T ss_pred             CEEEEecCC-CCCHHHHHHHHHHHHHHHHh
Confidence            689999864 46778999999999998754

>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*

Probab=99.95  E-value=1.6e-25  Score=226.63  Aligned_cols=341  Identities=12%  Similarity=0.089  Sum_probs=225.0

Q ss_pred             cccccCCCCCCHHHHHHHHHHhhcCC----CCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHH
Q 037144           78 NYFAYFPATSSVAGIVGEMLSSGFNV----VGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEAL  153 (502)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~l~~~~n~----~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~  153 (502)
                      .|+++...++.++.++ +.+...+..    ....+..+........++.+++++++|.+.+       .+++|+|||+|+
T Consensus         3 ~yld~~~~~~~~~~v~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~-------~v~~~~g~t~a~   74 (384)
T 1eg5_A            3 VYFDNNATTRVDDRVL-EEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLGVSPS-------EIFFTSCATESI   74 (384)
T ss_dssp             EECBTTTCCCCCHHHH-HHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTSCGG-------GEEEESCHHHHH
T ss_pred             EEEecCccCCCCHHHH-HHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHcCCCCC-------eEEEECCHHHHH
Confidence            3566655555445444 333333321    1111222334466777888999999998754       589999999999


Q ss_pred             HHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHH---HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhc
Q 037144          154 LCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAA---QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEA  230 (502)
Q Consensus       154 ~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa---~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~  230 (502)
                      ..++.+++....       .+++.|+++..+|+++...+   +..|+   +++.+|+++  ++.+|+++|+++|+++   
T Consensus        75 ~~~~~~~~~~~~-------~~gd~vl~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~---  139 (384)
T 1eg5_A           75 NWILKTVAETFE-------KRKRTIITTPIEHKAVLETMKYLSMKGF---KVKYVPVDS--RGVVKLEELEKLVDED---  139 (384)
T ss_dssp             HHHHHHHHHHTT-------TTCCEEEECTTSCHHHHHHHHHHHHTTC---EEEECCBCT--TSCBCHHHHHHHCCTT---
T ss_pred             HHHHHhhhhhcc-------CCCCEEEECCCCchHHHHHHHHHHhcCC---EEEEEccCC--CCccCHHHHHHHhCCC---
Confidence            988887763100       05678899999999887766   67788   999999875  4689999999998643   


Q ss_pred             CCccEEEEEecCCccccccCChhHHHHHHHHhC--CEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc
Q 037144          231 ELIPLFLCATVGTTAITAVDPLKPLCDVAKQFG--IWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD  308 (502)
Q Consensus       231 g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g--~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~  308 (502)
                         +.+|+++.++|++|.+.|+++|.++|++||  +++|+|++|+.+....+     +... ++|++++++||+++ |.|
T Consensus       140 ---~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~li~Dea~~~~~~~~~-----~~~~-~~di~~~s~sK~~g-~~G  209 (384)
T 1eg5_A          140 ---TFLVSIMAANNEVGTIQPVEDVTRIVKKKNKETLVHVDAVQTIGKIPFS-----LEKL-EVDYASFSAHKFHG-PKG  209 (384)
T ss_dssp             ---EEEEEEESBCTTTCBBCCHHHHHHHHHHHCTTCEEEEECTTTTTTSCCC-----CTTT-CCSEEEEEGGGGTS-CTT
T ss_pred             ---CeEEEEECCCCCcccccCHHHHHHHHHhcCCceEEEEEhhhhcCCcccC-----chhc-CCCEEEecHHHhcC-CCc
Confidence               457888999999999999999999999999  99999999873322211     1122 58999999999865 556


Q ss_pred             ceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHH
Q 037144          309 CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAK  387 (502)
Q Consensus       309 ~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~  387 (502)
                      +|++++++...+.       .++......     .  .   . ..++.. .....++.+++.+ .++++++.++..++++
T Consensus       210 ~G~~~~~~~~~~~-------~~~~~~~~~-----~--~---~-~~~~~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~  270 (384)
T 1eg5_A          210 VGITYIRKGVPIR-------PLIHGGGQE-----R--G---L-RSGTQNVPGIVGAARAMEIA-VEELSEAAKHMEKLRS  270 (384)
T ss_dssp             CEEEEECTTSCCC-------CSBCSSCTT-----T--T---T-BCSCCCHHHHHHHHHHHHHH-HHTHHHHHHHHHHHHH
T ss_pred             eEEEEEcCCCccc-------cccccCccc-----c--c---c-cCCCCChHHHHHHHHHHHHH-HHhHHHHHHHHHHHHH
Confidence            8998886542011       111110000     0  0   0 001111 1122334455442 4567889999999999


Q ss_pred             HHHHHHhcCCCeEEecCC---CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEE
Q 037144          388 LFERLVTSDKRFEVAFPR---NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMT  464 (502)
Q Consensus       388 ~l~~~l~~~~~~~l~~~~---~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~  464 (502)
                      ++.+.|++ +++++..++   ...++.|.+....                             ..++.+.|.+.|..+..
T Consensus       271 ~l~~~L~~-~g~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~l~~~gi~v~~  320 (384)
T 1eg5_A          271 KLVSGLMN-LGAHIITPLEISLPNTLSVSFPNIR-----------------------------GSTLQNLLSGYGIYVST  320 (384)
T ss_dssp             HHHHHHHT-TTCEECSCTTSBCTTEEEEECTTCC-----------------------------HHHHHHHHHHTTEECBC
T ss_pred             HHHHHhCC-CCeEEeCCcccCCCCEEEEEeCCCC-----------------------------HHHHHHHHhhCCeEEec
Confidence            99999998 689887543   2346677654211                             23566677677764433


Q ss_pred             eeeEC-------------------CEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          465 HAIVG-------------------GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       465 ~~~~~-------------------g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      +..+.                   +..++|+++. ..++++|++++++.|+++.++
T Consensus       321 g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~-~~~~~~~i~~~~~~l~~~~~~  375 (384)
T 1eg5_A          321 SSACTSKDERLRHVLDAMGVDRRIAQGAIRISLC-KYNTEEEVDYFLKKIEEILSF  375 (384)
T ss_dssp             ------------CHHHHTTCCHHHHHHEEEEECC-TTCCHHHHHHHHHHHHHHHHH
T ss_pred             cccccCCCCcchHHHHHcCCChhhcCCeEEEECC-CCCCHHHHHHHHHHHHHHHHH
Confidence            22111                   1368999975 456778999999999988765

>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*

Probab=99.95  E-value=4.7e-26  Score=232.25  Aligned_cols=357  Identities=15%  Similarity=0.076  Sum_probs=231.3

Q ss_pred             cccccCCCCCCHHHHHHHHHHhhcCC-----CCcccccChhhHHHHHHHHHHHHHhcCC-CCccCcCCCCcEEEcCCchH
Q 037144           78 NYFAYFPATSSVAGIVGEMLSSGFNV-----VGLDWISSPAAVELENIVMDWLGQMLDL-PKSFLFSGNGGGVIQGTTCE  151 (502)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~l~~~~n~-----~~~~~~~~p~~~~le~~~~~~l~~l~g~-~~~~~~~~~~~g~~t~ggt~  151 (502)
                      .||++...++.++. +.+.+...+..     ....+..+........++++++++++|. +..       ..++|+|||+
T Consensus        25 i~l~~~~~~~~~~~-v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~-------~v~~~~g~t~   96 (406)
T 1kmj_A           25 AYLDSAASAQKPSQ-VIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSAE-------ELVFVRGTTE   96 (406)
T ss_dssp             EECCTTTCCCCCHH-HHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTTCSCGG-------GEEEESSHHH
T ss_pred             EEecCCccCCCCHH-HHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHcCCCCCC-------eEEEeCChhH
Confidence            46666655554444 44444444322     1111111222355666788899999998 333       6899999999


Q ss_pred             HHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhH----HHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHH
Q 037144          152 ALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAF----QKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLD  227 (502)
Q Consensus       152 a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~----~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~  227 (502)
                      |+..++.+++....       .+++.|+++..+|++.    ...++..|+   +++.+|+++  ++.+|+++|+++|+++
T Consensus        97 a~~~~~~~~~~~~~-------~~gd~vl~~~~~~~~~~~~~~~~~~~~g~---~~~~~~~~~--~~~~d~~~l~~~l~~~  164 (406)
T 1kmj_A           97 GINLVANSWGNSNV-------RAGDNIIISQMEHHANIVPWQMLCARVGA---ELRVIPLNP--DGTLQLETLPTLFDEK  164 (406)
T ss_dssp             HHHHHHHHTHHHHC-------CTTCEEEEETTCCGGGTHHHHHHHHHHTC---EEEEECBCT--TSCBCGGGHHHHCCTT
T ss_pred             HHHHHHHHhhhhcC-------CCCCEEEEecccchHHHHHHHHHHHhCCC---EEEEEecCC--CCCcCHHHHHHHhccC
Confidence            99988887742111       1567888888898764    345778899   999999875  4689999999998643


Q ss_pred             HhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC
Q 037144          228 VEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL  307 (502)
Q Consensus       228 ~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~  307 (502)
                            +.+|+++.++|++|.+.|+++|+++|++||+++++|++|+.+....+ ....     +.|+++.++||++ +|.
T Consensus       165 ------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~g~~~~~-~~~~-----~~d~~~~s~~K~~-g~~  231 (406)
T 1kmj_A          165 ------TRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVD-VQAL-----DCDFYVFSGHKLY-GPT  231 (406)
T ss_dssp             ------EEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCC-HHHH-----TCSEEEEEGGGTT-SCT
T ss_pred             ------CeEEEEeCCCccccCcCCHHHHHHHHHHcCCEEEEEchhhcCCCCCc-cccc-----CCCEEEEEchhcc-CCC
Confidence                  45888999999999999999999999999999999999987654322 2221     6899999999988 566


Q ss_pred             cceEEEeeCchhhhhhhcCCcccccCccCCCCCcc--cccCCCcccccCCCC-CC-chHHHHHHHHhcHHHHHHHHHHHH
Q 037144          308 DCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKE--QEVGYKDWQITLCRR-FR-SLKLWVVIRNFGVANLRNFIRSHV  383 (502)
Q Consensus       308 ~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~--~~~~~~~~~~~~sr~-~~-al~~~~~l~~~g~~g~~~~~~~~~  383 (502)
                      |+|++++++ .... .+....  ............  ..+....+.++.+.. .. .+++..+++.+...+++++.++..
T Consensus       232 G~G~~~~~~-~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~  307 (406)
T 1kmj_A          232 GIGILYVKE-ALLQ-EMPPWE--GGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQ  307 (406)
T ss_dssp             TCEEEEECH-HHHH-HCCCSS--CSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred             CcEEEEEeH-HHHh-hcCCcc--cCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence            789998863 3322 221110  000000000000  000000011111111 11 122334555555557888899999


Q ss_pred             HHHHHHHHHHhcCCCeEEecCC-CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEE
Q 037144          384 GMAKLFERLVTSDKRFEVAFPR-NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVF  462 (502)
Q Consensus       384 ~la~~l~~~l~~~~~~~l~~~~-~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~  462 (502)
                      ++++++.+.|+++|++++..+. ..++++|.+.+..                             ..++.+.+.+.|..+
T Consensus       308 ~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~l~~~gi~v  358 (406)
T 1kmj_A          308 NLMHYALSQLESVPDLTLYGPQNRLGVIAFNLGKHH-----------------------------AYDVGSFLDNYGIAV  358 (406)
T ss_dssp             HHHHHHHHHHTTSTTEEEESCTTCCSEEEEEETTCC-----------------------------HHHHHHHHHHTTEEC
T ss_pred             HHHHHHHHHHhcCCCeEEecCCCcCCEEEEEECCCC-----------------------------HHHHHHHHhhCCcEE
Confidence            9999999999999899988542 6778888763211                             234566777778654


Q ss_pred             EEeee--------ECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          463 MTHAI--------VGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       463 ~~~~~--------~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      .++..        ++...++|+++. ..++++|+++++++|+++.+.
T Consensus       359 ~~g~~~~~~~~~~~g~~~~iRis~~-~~~t~~~i~~~~~~l~~~~~~  404 (406)
T 1kmj_A          359 RTGHHCAMPLMAYYNVPAMCRASLA-MYNTHEEVDRLVTGLQRIHRL  404 (406)
T ss_dssp             EEECTTCHHHHHHTTCSCEEEEECC-TTCCHHHHHHHHHHHHHHHHH
T ss_pred             EeccccchHHHHhcCCCCeEEEEee-cCCCHHHHHHHHHHHHHHHHh
Confidence            33321        122478999986 446777999999999988764

>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}

Probab=99.95  E-value=1.1e-26  Score=236.87  Aligned_cols=352  Identities=12%  Similarity=0.066  Sum_probs=210.8

Q ss_pred             CCcccccCCCCCCHHHHHHHHHHhhc----CCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchH
Q 037144           76 SPNYFAYFPATSSVAGIVGEMLSSGF----NVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCE  151 (502)
Q Consensus        76 ~p~~~~~~~~~~~~~~~~~~~l~~~~----n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~  151 (502)
                      +..|+++..+++.++.++ +.+...+    .+....+..+....++..++.+++++++|.+.+       .+++|+||++
T Consensus        20 ~~iyld~~~~~~~~~~v~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~-------~v~~~~g~t~   91 (400)
T 3vax_A           20 HMTYLDAAATTRVDQRVA-DIVLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTVSAEPD-------ELIFTSGATE   91 (400)
T ss_dssp             --CCCCCCCCSSSCHHHH-HHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHTTCCGG-------GEEEESCHHH
T ss_pred             CcEEecCCCCCCCCHHHH-HHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHcCCCCC-------cEEEeCCHHH
Confidence            456777766555555444 3333322    222223444455667788899999999999754       5899999999


Q ss_pred             HHHHHHHHHHHHHHHHhCccCCCCe-EEEeCCCCchhHHHHHHH---cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHH
Q 037144          152 ALLCTLTAARDRVLKKIGRENISKL-VVYSSDQTHCAFQKAAQI---VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLD  227 (502)
Q Consensus       152 a~~~al~~a~~~~~~~~~~~~~~~~-~v~~s~~~H~s~~~aa~~---~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~  227 (502)
                      |+..++.+.+....+       +++ .|+++...|+++...+..   .|+   +++.+|+++  ++.+|+++|+++|+++
T Consensus        92 al~~~~~~l~~~~~~-------~gd~~Vl~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~  159 (400)
T 3vax_A           92 SNNIALLGLAPYGER-------TGRRHIITSAIEHKAVLEPLEHLAGRGF---EVDFLTPGP--SGRISVEGVMERLRPD  159 (400)
T ss_dssp             HHHHHHHTTHHHHHH-------HTCCEEEEETTSCHHHHHHHHHHHTTTC---EEEEECCCT--TCCCCHHHHHTTCCTT
T ss_pred             HHHHHHHHHHHhhcc-------CCCCEEEECccccHhHHHHHHHHHhcCC---eEEEEccCC--CCCcCHHHHHHhcCCC
Confidence            999888877532111       466 888899999998776665   477   999999875  5689999999998653


Q ss_pred             HhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC
Q 037144          228 VEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL  307 (502)
Q Consensus       228 ~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~  307 (502)
                            +.+|+++.++|++|.+.|+++|.++|++||+++++|++|+.+....+     +...  +|+++.++||+ ++|.
T Consensus       160 ------~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~-----~~~~--~d~~~~s~~K~-~g~~  225 (400)
T 3vax_A          160 ------TLLVSLMHVNNETGVIQPVAELAQQLRATPTYLHVDAAQGYGKVPGD-----LTTP--IDMISISGHKI-GAPK  225 (400)
T ss_dssp             ------EEEEECCSBCTTTCBBCCHHHHHHHHTTSSCEEEEECTTTTTTSGGG-----GGSC--CSEEEEETGGG-TSCS
T ss_pred             ------ceEEEEECCCCCceeeCcHHHHHHHHHhcCCEEEEEhhhhcCCCCcC-----hhhc--CcEEEEeHHHh-CCCC
Confidence                  45899999999999999999999999999999999999976543321     2222  89999999995 5577


Q ss_pred             cceEEE-eeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCC-CC-CchHHHHHHHHhcHHHHHHHHHHHHH
Q 037144          308 DCCCLW-VKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCR-RF-RSLKLWVVIRNFGVANLRNFIRSHVG  384 (502)
Q Consensus       308 ~~g~~~-~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr-~~-~al~~~~~l~~~g~~g~~~~~~~~~~  384 (502)
                      ++|+++ ++++...... .....++.....            ......+. .. ....+..+++.+ .++++++.++..+
T Consensus       226 g~g~~~~~~~~~~~~~~-~~~~~~~~~~~~------------~~~~~~~~~~~~~~~a~~~al~~~-~~~~~~~~~~~~~  291 (400)
T 3vax_A          226 GVGALVTRRREEMDDER-VPLEPIMFGGGQ------------ERKLRPGTLPVPLIMGLAEAAKIF-EAEHAQWQVAAQD  291 (400)
T ss_dssp             SCEEEEECBCSSSTTCB-CCCCCSSCSSCT------------GGGTSCSCCCHHHHHHHHHHHHHH-HHSHHHHHHHHHH
T ss_pred             ceEEEEEecchhccccc-cccCceecCCCc------------eeeeecCCCCHHHHHHHHHHHHHH-HhhHHHHHHHHHH
Confidence            899999 8774322100 000111111000            00000010 10 112222334332 4577889999999


Q ss_pred             HHHHHHHHHhcCCCeEEecCCC---eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHH-HHHHhcCc
Q 037144          385 MAKLFERLVTSDKRFEVAFPRN---FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELL-ESINVSGK  460 (502)
Q Consensus       385 la~~l~~~l~~~~~~~l~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~l~~~g~  460 (502)
                      +++++.+.|+ .+++++..++.   .+++.|......                      .   .++.+.+. .-+...|.
T Consensus       292 ~~~~l~~~L~-~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~---~~l~~~L~~gi~v~~g~  345 (400)
T 3vax_A          292 LRSRLLAGLA-STSFQVNGDQDHVVPHILNLSFEDVD----------------------A---EAFLVTLKDLVAVATGS  345 (400)
T ss_dssp             HHHHHHHHHT-TTTCEECSCTTSBCTTEEEEECTTCC----------------------H---HHHHHHHHHHHHHTTTT
T ss_pred             HHHHHHHhhC-CCCEEEeCCcccCCCCEEEEEeCCCC----------------------H---HHHHHHHhcCcEEEecc
Confidence            9999999999 88999875543   357777664321                      0   12222222 11223343


Q ss_pred             EEEEeee--------E--C---CEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          461 VFMTHAI--------V--G---GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       461 ~~~~~~~--------~--~---g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      .+.....        +  .   ...++|+++++..++++++++++++|+++.++
T Consensus       346 ~~~~~~~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~  399 (400)
T 3vax_A          346 ASTSASFTPSHVLRAMGLPEEAASKSLRFSWTPGQATDLDVEELARGVAKLKPS  399 (400)
T ss_dssp             EEEEEEECCHHHHHTTTCCHHHHTSEEEEEEEEC--------------------
T ss_pred             cccCCCCCccHHHHHcCCCccccCceEEEEccCCCCCHHHHHHHHHHHHHHhcc
Confidence            3322210        0  0   03689999922445677999999999988764

>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3

Probab=99.95  E-value=4.9e-26  Score=228.66  Aligned_cols=315  Identities=12%  Similarity=0.091  Sum_probs=212.1

Q ss_pred             HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh-HHHHHHH
Q 037144          116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA-FQKAAQI  194 (502)
Q Consensus       116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s-~~~aa~~  194 (502)
                      ....++++++++++|.+...     ..+++|+|||+|+..++.+++..          ++.+++.+...|.+ +..++..
T Consensus        37 ~~~~~l~~~la~~~g~~~~~-----~~v~~~~g~t~a~~~~~~~~~~~----------gd~vi~~~~~~~~~~~~~~~~~  101 (366)
T 1m32_A           37 GVVEQIRQQLTALATASEGY-----TSVLLQGSGSYAVEAVLGSALGP----------QDKVLIVSNGAYGARMVEMAGL  101 (366)
T ss_dssp             TTHHHHHHHHHHHHCSSSSE-----EEEEEESCHHHHHHHHHHHSCCT----------TCCEEEEESSHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCcC-----cEEEEecChHHHHHHHHHHhcCC----------CCeEEEEeCCCccHHHHHHHHH
Confidence            44556777888888843211     14899999999998888776431          23355566677876 5677888


Q ss_pred             cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccccc
Q 037144          195 VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAG  274 (502)
Q Consensus       195 ~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~  274 (502)
                      .|+   +++.+|++.  ++.+|+++|+++|++..    .+.+|+++.++|++|.+.|+++|.++|++||+++|+|++|+.
T Consensus       102 ~g~---~~~~v~~~~--~~~~d~~~l~~~l~~~~----~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~  172 (366)
T 1m32_A          102 MGI---AHHAYDCGE--VARPDVQAIDAILNADP----TISHIAMVHSETTTGMLNPIDEVGALAHRYGKTYIVDAMSSF  172 (366)
T ss_dssp             HTC---CEEEEECCT--TSCCCHHHHHHHHHHCT----TCCEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTT
T ss_pred             hCC---ceEEEeCCC--CCCCCHHHHHHHHhcCC----CeEEEEEecccCCcceecCHHHHHHHHHHcCCEEEEECCccc
Confidence            999   999999875  46899999999998632    134777888999999999999999999999999999999976


Q ss_pred             ccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcC-CcccccCccCCCCCcccccCCCcc-cc
Q 037144          275 SACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLST-NPQYLKNEATDQEPKEQEVGYKDW-QI  352 (502)
Q Consensus       275 ~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~-~~  352 (502)
                      +....+ .    .. .++|+++.++||++++|.|+|++++++.. . +.+.. ...|.....       ..  +..+ ..
T Consensus       173 ~~~~~~-~----~~-~~~di~~~s~~K~~~~~~g~G~~~~~~~~-~-~~~~~~~~~~~~~~~-------~~--~~~~~~~  235 (366)
T 1m32_A          173 GGIPMD-I----AA-LHIDYLISSANKCIQGVPGFAFVIAREQK-L-AACKGHSRSLSLDLY-------AQ--WRCMEDN  235 (366)
T ss_dssp             TTSCCC-T----TT-TTCSEEEEESSSTTCCCSSEEEEEEEHHH-H-TTCTTCCSCSTTCHH-------HH--HHHHHHT
T ss_pred             cCcCcc-c----cc-cCccEEEecCcccccCCCceEEEEECHHH-H-HhhcCCCCCccccHH-------HH--Hhhhccc
Confidence            544322 1    11 15899999999999888889999987542 2 22211 111111000       00  0000 00


Q ss_pred             cCCCCC--C---chHHHHHHHHhcHHH-HHHHHHHHHHHHHHHHHHHhcCCCeEEecC--CCee-EEEEEeecC-cchhh
Q 037144          353 TLCRRF--R---SLKLWVVIRNFGVAN-LRNFIRSHVGMAKLFERLVTSDKRFEVAFP--RNFS-LVCFRVTPS-AVMDK  422 (502)
Q Consensus       353 ~~sr~~--~---al~~~~~l~~~g~~g-~~~~~~~~~~la~~l~~~l~~~~~~~l~~~--~~~~-~v~f~~~~~-~~~~~  422 (502)
                      ...+++  .   ...+..+++.+...| +.++.++..++++++.+.|+++ ++++..+  +..+ +++|.++.. +.   
T Consensus       236 ~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---  311 (366)
T 1m32_A          236 HGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRAL-GFNTLLDDELHSPIITAFYSPEDPQY---  311 (366)
T ss_dssp             TTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCGGGBCSSEEEEECCCCTTC---
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHHC-CCeeccCchhcCceEEEEEcCccCCC---
Confidence            011111  1   124455666555555 7889999999999999999988 7877644  2344 667766420 10   


Q ss_pred             hhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          423 LRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                                              ...++.+.|.++|..+ .++...+..++|++++. .++++++++++++|+++.++
T Consensus       312 ------------------------~~~~~~~~l~~~gi~v-~~~~~~~~~~iRi~~~~-~~~~~~i~~~~~~l~~~~~~  364 (366)
T 1m32_A          312 ------------------------RFSEFYRRLKEQGFVI-YPGKVSQSDCFRIGNIG-EVYAADITALLTAIRTAMYW  364 (366)
T ss_dssp             ------------------------CHHHHHHHHHHTTEEC-EECCCSSSCEEEEECCS-SCCHHHHHHHHHHHHHHCTT
T ss_pred             ------------------------CHHHHHHHHHHCCEEE-ECCcCCCCCEEEEecCC-CCCHHHHHHHHHHHHHHHHh
Confidence                                    0245677777778643 33333356789999864 46677999999999988765

>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0

Probab=99.94  E-value=5.4e-26  Score=230.84  Aligned_cols=335  Identities=9%  Similarity=0.050  Sum_probs=228.8

Q ss_pred             HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144           90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG  169 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~  169 (502)
                      +..+.+.+...+......|...  ..++++++.+++++.+|.+...     ...++|+||++++..++.+...       
T Consensus        42 ~~~v~~a~~~~~~~~~~~y~~~--~~~l~~~la~~l~~~~g~~~~~-----~~i~~~~g~~~a~~~~~~~l~~-------  107 (391)
T 3dzz_A           42 APEIMASMEEKLKVAAFGYESV--PAEYYKAVADWEEIEHRARPKE-----DWCVFASGVVPAISAMVRQFTS-------  107 (391)
T ss_dssp             CHHHHHHHHHHHTTCCCCCBCC--CHHHHHHHHHHHHHHHSCCCCG-----GGEEEESCHHHHHHHHHHHHSC-------
T ss_pred             CHHHHHHHHHHHhcCcCCCCCC--CHHHHHHHHHHHHHHhCCCCCH-----HHEEECCCHHHHHHHHHHHhCC-------
Confidence            3445566666665444444433  5789999999999999954221     2689999999999888776532       


Q ss_pred             ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecC-CCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144          170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTT-KSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA  248 (502)
Q Consensus       170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~-~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~  248 (502)
                          +++.|+++..+|.++..+++..|.   +++.+|++ .++++.+|+++|+++|++.     .+.+|+++.++|++|.
T Consensus       108 ----~gd~vl~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~d~~~l~~~l~~~-----~~~~v~i~~p~nptG~  175 (391)
T 3dzz_A          108 ----PGDQILVQEPVYNMFYSVIEGNGR---RVISSDLIYENSKYSVNWADLEEKLATP-----SVRMMVFCNPHNPIGY  175 (391)
T ss_dssp             ----TTCEEEECSSCCHHHHHHHHHTTC---EEEECCCEEETTEEECCHHHHHHHHTST-----TEEEEEEESSBTTTTB
T ss_pred             ----CCCeEEECCCCcHHHHHHHHHcCC---EEEEeeeeecCCceeecHHHHHHHHhcc-----CceEEEEECCCCCCCc
Confidence                577899999999999999999999   99999986 2345679999999999631     2447888899999999


Q ss_pred             c---CChhHHHHHHHHhCCEEEeecccccccccCccchhhhcC-CCCCC--eeEEccCCcCC-CCCcceEEEeeCchhhh
Q 037144          249 V---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDG-VECVD--SFSFNPHKWLF-TTLDCCCLWVKDPSCLL  321 (502)
Q Consensus       249 i---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~-~~~aD--si~~~~hK~l~-~p~~~g~~~~r~~~~l~  321 (502)
                      +   +++++|+++|++||+++|+|++|+.+............. ....|  +++.++||+++ .+..+|+++++++....
T Consensus       176 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~  255 (391)
T 3dzz_A          176 AWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPNPDLRA  255 (391)
T ss_dssp             CCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCSHHHHH
T ss_pred             ccCHHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEEEECCHHHHH
Confidence            9   889999999999999999999998765432211111111 11245  88899999996 55678888887555432


Q ss_pred             hhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc-CCCeE
Q 037144          322 STLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTS-DKRFE  400 (502)
Q Consensus       322 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~-~~~~~  400 (502)
                       .+.........                   ..........+..++.. +.+.++++.++..++++++.+.|++ +|+++
T Consensus       256 -~~~~~~~~~~~-------------------~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~  314 (391)
T 3dzz_A          256 -RAEESFFLAGI-------------------GEPNLLAIPAAIAAYEE-GHDWLRELKQVLRDNFAYAREFLAKEVPEVK  314 (391)
T ss_dssp             -HHHHHHHHHTC-------------------SSCCTTHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCTTSE
T ss_pred             -HHHHHHHhhcc-------------------CCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHhhCCCcE
Confidence             22111000000                   00001122233334443 5667888999999999999999998 89999


Q ss_pred             EecCCCeeEEE-EEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeEC--CEEEEEE
Q 037144          401 VAFPRNFSLVC-FRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVG--GIYVLRF  476 (502)
Q Consensus       401 l~~~~~~~~v~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lR~  476 (502)
                      +.. +..+++. +.+...+.                           ...++.++|. +.|..+.++..+.  +..++|+
T Consensus       315 ~~~-~~~~~~~~~~~~~~~~---------------------------~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi  366 (391)
T 3dzz_A          315 VLD-SNASYLAWVDISALGM---------------------------NAEDFCKYLREKTGLIISAGNGYRGNGHEFVRI  366 (391)
T ss_dssp             ECC-CCBSSEEEEECGGGCS---------------------------CHHHHHHHHHHHHCEECEESGGGCTTGGGEEEE
T ss_pred             Eec-cCceEEEEEehhhcCC---------------------------CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEE
Confidence            874 4444444 44432110                           0235666664 5686544433332  3579999


Q ss_pred             EecCCCCcHHHHHHHHHHHHHHHHhC
Q 037144          477 AAGNSMTMESHVRAAWTVVQEHLEAF  502 (502)
Q Consensus       477 ~~~~~~t~~~di~~~~~~l~~~~~~~  502 (502)
                      +++   +++++|+++++.|.++.+++
T Consensus       367 s~~---~~~~~i~~~l~~l~~~l~~~  389 (391)
T 3dzz_A          367 NLA---CPKELVIDGMQRLKQGVLNL  389 (391)
T ss_dssp             ECC---SCHHHHHHHHHHHHHHHHTC
T ss_pred             Eec---CCHHHHHHHHHHHHHHHHHh
Confidence            986   47789999999999987753

>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3

Probab=99.94  E-value=5.3e-26  Score=230.32  Aligned_cols=353  Identities=13%  Similarity=0.057  Sum_probs=226.6

Q ss_pred             CcccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHH
Q 037144           77 PNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCT  156 (502)
Q Consensus        77 p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~a  156 (502)
                      |+.+.+.+++..++..+.+.+......   .+  +|.......+++++++++++.....   ....+++|+|||+|+..+
T Consensus         4 ~~~~~~~p~p~~~~~~v~~a~~~~~~~---~~--~~~~~~~~~~~~~~l~~~~~~~~~~---~~~~v~~~~g~t~al~~~   75 (385)
T 2bkw_A            4 SVDTLLIPGPIILSGAVQKALDVPSLG---HT--SPEFVSIFQRVLKNTRAVFKSAAAS---KSQPFVLAGSGTLGWDIF   75 (385)
T ss_dssp             CCCEECSSSSCCCCHHHHHTTSCCCCC---TT--SHHHHHHHHHHHHHHHHHTTCCGGG---TCEEEEEESCTTHHHHHH
T ss_pred             ccceeecCCCcCchHHHHHHHhccccc---cC--CHHHHHHHHHHHHHHHHHhCCCCCC---CCceEEEcCchHHHHHHH
Confidence            445666666666555565555544332   12  5555556667888888888764210   012589999999999888


Q ss_pred             HHHHHHHHHHHhCccCCCCeEEEeCCC--CchhHHHHHHHcCCCCCCEEEEec-CCCCCcccCHHHHHHHHHHHHhcCCc
Q 037144          157 LTAARDRVLKKIGRENISKLVVYSSDQ--THCAFQKAAQIVGIDRKNIRAIKT-TKSSSYGLSAESVLSQINLDVEAELI  233 (502)
Q Consensus       157 l~~a~~~~~~~~~~~~~~~~~v~~s~~--~H~s~~~aa~~~Glg~~~v~~v~~-~~~~~~~~d~~~Le~~i~~~~~~g~~  233 (502)
                      +.+....        ..+++.|++...  .|.++.++++..|+   +++.+|+ +.  ++.+|+++|+++|++.     .
T Consensus        76 ~~~~~~~--------~~~gd~vlv~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~--~~~~d~~~l~~~l~~~-----~  137 (385)
T 2bkw_A           76 ASNFILS--------KAPNKNVLVVSTGTFSDRFADCLRSYGA---QVDVVRPLKI--GESVPLELITEKLSQN-----S  137 (385)
T ss_dssp             HHHHSCT--------TCSCCEEEEECSSHHHHHHHHHHHHTTC---EEEEECCSST--TSCCCHHHHHHHHHHS-----C
T ss_pred             HHHHhcc--------CCCCCeEEEEcCCcchHHHHHHHHHcCC---ceEEEecCCC--CCCCCHHHHHHHHhcC-----C
Confidence            8766310        004555555433  34455577888899   9999998 64  5689999999999761     1


Q ss_pred             cEEEEEecCCccccccCChhHHHHHHHHh--CCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceE
Q 037144          234 PLFLCATVGTTAITAVDPLKPLCDVAKQF--GIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCC  311 (502)
Q Consensus       234 p~~Vv~t~gtt~~G~idpl~eI~~i~~~~--g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~  311 (502)
                      +.+|+++.++|++|.+.|+++|+++|++|  |+++|+|++|+.+....+ .    ... ++|++++++|||+++|.|+|+
T Consensus       138 ~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~~~li~D~a~~~~~~~~~-~----~~~-~~d~~~~s~~K~~~~~~G~G~  211 (385)
T 2bkw_A          138 YGAVTVTHVDTSTAVLSDLKAISQAIKQTSPETFFVVDAVCSIGCEEFE-F----DEW-GVDFALTASQKAIGAPAGLSI  211 (385)
T ss_dssp             CSEEEEESEETTTTEECCHHHHHHHHHHHCTTSEEEEECTTTTTTSCCC-T----TTT-TCSEEEEESSSTTCCCSCEEE
T ss_pred             CCEEEEEccCCCcCeEcCHHHHHHHHHhhCCCCEEEEECccccCCcccc-c----ccc-CceEEEecCccccccCCcceE
Confidence            33788899999999999999999999999  999999999976544322 1    111 589999999999998888999


Q ss_pred             EEeeCchhhhhhhc-----CCcccccCccCCCCCcccccCCCccccc-----CCCC-CCchHHHHHHHHhcHHHHHHHHH
Q 037144          312 LWVKDPSCLLSTLS-----TNPQYLKNEATDQEPKEQEVGYKDWQIT-----LCRR-FRSLKLWVVIRNFGVANLRNFIR  380 (502)
Q Consensus       312 ~~~r~~~~l~~~~~-----~~~~yl~~~~~~~~~~~~~~~~~~~~~~-----~sr~-~~al~~~~~l~~~g~~g~~~~~~  380 (502)
                      ++++++. +...+.     ....|.......   . ..  ...+...     ++.. .....+..+++.+...++.++.+
T Consensus       212 ~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~---~-~~--~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~  284 (385)
T 2bkw_A          212 SLCSSRF-MDYALNDSKNGHVHGYFSSLRRW---T-PI--MENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWD  284 (385)
T ss_dssp             EEECHHH-HHHHTCHHHHCCCSCSTTCHHHH---H-HH--HHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred             EEEcHHH-HHHHHhhccCCCCCceeecHHHH---h-hH--HHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHH
Confidence            8886543 220111     001111000000   0 00  0000000     0111 11234445566554556888899


Q ss_pred             HHHHHHHHHHHHH-hcCCCeEEecCC-----CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHH
Q 037144          381 SHVGMAKLFERLV-TSDKRFEVAFPR-----NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLES  454 (502)
Q Consensus       381 ~~~~la~~l~~~l-~~~~~~~l~~~~-----~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  454 (502)
                      +..++++++.+.| +++ +++++.+.     ..++++|.+..                               ..++.++
T Consensus       285 ~~~~~~~~l~~~L~~~~-g~~~~~~~~~~~~~~~~~~~~~~~-------------------------------~~~~~~~  332 (385)
T 2bkw_A          285 LHREMSDWFKDSLVNGL-QLTSVSRYPSNMSAHGLTAVYVAD-------------------------------PPDVIAF  332 (385)
T ss_dssp             HHHHHHHHHHHHHHTTT-CCEESSCSSSTTBCSSCEEEECSC-------------------------------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhc-CceecccCcccccCCceEEEecCC-------------------------------HHHHHHH
Confidence            9999999999999 888 88887421     35667776531                               2356667


Q ss_pred             HHhcCcEEEEeeeE--CCEEEEEEE-ecC--CCCcHHHHHHHHHHHHHHHHh
Q 037144          455 INVSGKVFMTHAIV--GGIYVLRFA-AGN--SMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       455 l~~~g~~~~~~~~~--~g~~~lR~~-~~~--~~t~~~di~~~~~~l~~~~~~  501 (502)
                      |.++|.. +.+...  .+..++|++ +..  +.++++|++++++.|+++.++
T Consensus       333 l~~~gi~-v~~g~~~~~~~~~iRis~~~~~~~~~~~e~i~~~~~~l~~~~~~  383 (385)
T 2bkw_A          333 LKSHGVV-IAGGIHKDIGPKYIRIGHMGVTACNKNLPYMKNCFDLIKLALQR  383 (385)
T ss_dssp             HHHTTEE-CBCCCCTTTGGGEEEECCCGGGTSSTTCTHHHHHHHHHHHHTTC
T ss_pred             HHHCCeE-EeCCCCcccCCCEEEEEccccccccCCHHHHHHHHHHHHHHHHh
Confidence            7667754 333221  135689999 541  235677999999999988764

>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}

Probab=99.94  E-value=4.9e-26  Score=232.56  Aligned_cols=343  Identities=11%  Similarity=0.049  Sum_probs=223.0

Q ss_pred             CcccccCCCCCCHHHHHHHHHHhhcCC----CCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHH
Q 037144           77 PNYFAYFPATSSVAGIVGEMLSSGFNV----VGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEA  152 (502)
Q Consensus        77 p~~~~~~~~~~~~~~~~~~~l~~~~n~----~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a  152 (502)
                      ..|+++..+++.++.+ .+.+...+..    ....|..++.......++.+++++++|.+..       .+++|+|+|++
T Consensus        27 ~~~ld~~~~~~~~~~v-~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~-------~v~~~~g~t~a   98 (406)
T 3cai_A           27 WVHFDAPAGMLIPDSV-ATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLVNADPG-------GVVLGADRAVL   98 (406)
T ss_dssp             CEECBGGGCCCCCHHH-HHHHHHHHHHCCSSSCSSSHHHHHHHHHHHHHHHHHHHHHTCCGG-------GEEEESCHHHH
T ss_pred             eEEEeCCCcCCCCHHH-HHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCC-------eEEEeCChHHH
Confidence            3567766555444444 3444433321    1223433444566777889999999998654       58999999998


Q ss_pred             HHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH----cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHH
Q 037144          153 LLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI----VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDV  228 (502)
Q Consensus       153 ~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~----~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~  228 (502)
                      +..++.+.... .       .+++.|+++..+|.++......    .|.   +++.+|++++ ++.+|+++|+++|+++ 
T Consensus        99 l~~~~~~l~~~-~-------~~gd~vi~~~~~~~~~~~~~~~~~~~~g~---~v~~v~~~~~-~~~~d~~~l~~~l~~~-  165 (406)
T 3cai_A           99 LSLLAEASSSR-A-------GLGYEVIVSRLDDEANIAPWLRAAHRYGA---KVKWAEVDIE-TGELPTWQWESLISKS-  165 (406)
T ss_dssp             HHHHHHHTGGG-G-------BTTCEEEEETTSCGGGTHHHHHHHHHHBC---EEEEECCCTT-TCCCCGGGHHHHCCTT-
T ss_pred             HHHHHHHHhhc-c-------CCCCEEEEcCCccHHHHHHHHHHHHhcCC---eEEEEecCcc-cCCcCHHHHHHHhCCC-
Confidence            87665543100 0       0567888899999886555443    698   9999998732 4689999999998643 


Q ss_pred             hcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc
Q 037144          229 EAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD  308 (502)
Q Consensus       229 ~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~  308 (502)
                           +.+|+++.++|++|.+.|+++|.++|+++|+++|+|++|+.+....+ ....     ++|+++.++||+++ |. 
T Consensus       166 -----~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~-~~~~-----~~d~~~~s~~K~~g-~~-  232 (406)
T 3cai_A          166 -----TRLVAVNSASGTLGGVTDLRAMTKLVHDVGALVVVDHSAAAPYRLLD-IRET-----DADVVTVNAHAWGG-PP-  232 (406)
T ss_dssp             -----EEEEEEESBCTTTCBBCCCHHHHHHHHHTTCEEEEECTTTTTTCCCC-HHHH-----CCSEEEEEGGGGTS-CS-
T ss_pred             -----ceEEEEeCCcCCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCCC-chhc-----CCCEEEeehhhhcC-CC-
Confidence                 45888999999999999999999999999999999999986554332 2221     58999999999875 65 


Q ss_pred             ce-EEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCC-CCCCc-hHHHHHHHHhcHH------------
Q 037144          309 CC-CLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLC-RRFRS-LKLWVVIRNFGVA------------  373 (502)
Q Consensus       309 ~g-~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~s-r~~~a-l~~~~~l~~~g~~------------  373 (502)
                      +| ++++++ .... .+.....+....             ....+..+ ....+ ..+..+++.+...            
T Consensus       233 ~G~~~~~~~-~~~~-~l~~~~~~~~~~-------------~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~  297 (406)
T 3cai_A          233 IGAMVFRDP-SVMN-SFGSVSTNPYAT-------------GPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERL  297 (406)
T ss_dssp             CEEEEESCH-HHHH-TSCCCCSCTTCC-------------GGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHH
T ss_pred             cCeEEEEeh-HHHh-hcCCcccCCCCC-------------ccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhh
Confidence            78 777654 3222 221111011000             00011111 11111 1233344443221            


Q ss_pred             --HHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC--CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHH
Q 037144          374 --NLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR--NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNR  449 (502)
Q Consensus       374 --g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~--~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  449 (502)
                        +++++.++..++++++.+.|+++|++++..+.  ..++++|.+....                             ..
T Consensus       298 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~  348 (406)
T 3cai_A          298 AVSMQSADAYLNRVFDYLMVSLRSLPLVMLIGRPEAQIPVVSFAVHKVP-----------------------------AD  348 (406)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTCTTEEECCCCSSBCSEEEEEETTBC-----------------------------HH
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCccccCCEEEEEECCcC-----------------------------HH
Confidence              47888899999999999999999899887543  3567777764211                             23


Q ss_pred             HHHHHHHhcCcEEEEee------eE---CCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144          450 ELLESINVSGKVFMTHA------IV---GGIYVLRFAAGNSMTMESHVRAAWTVVQEH  498 (502)
Q Consensus       450 ~l~~~l~~~g~~~~~~~------~~---~g~~~lR~~~~~~~t~~~di~~~~~~l~~~  498 (502)
                      ++.+.|.+.|..+..+.      .+   .+..++|+++. ..++++|+++++++|+++
T Consensus       349 ~~~~~L~~~gi~v~~g~~~~~~~~~g~~~~~~~iRis~~-~~~t~e~i~~~~~~l~~~  405 (406)
T 3cai_A          349 RVVQRLADNGILAIANTGSRVLDVLGVNDVGGAVTVGLA-HYSTMAEVDQLVRALASL  405 (406)
T ss_dssp             HHHHHHHHTTEECEECCSCHHHHHHTTTTTTCCEEEECC-TTCCHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHCCcEEecCChHHHHHHcCCCCCCCeEEEEee-cCCCHHHHHHHHHHHHHh
Confidence            56666767776443322      01   12468999986 446778999999999764

>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*

Probab=99.94  E-value=6e-26  Score=230.32  Aligned_cols=315  Identities=14%  Similarity=0.131  Sum_probs=215.1

Q ss_pred             HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHH----
Q 037144          115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQK----  190 (502)
Q Consensus       115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~----  190 (502)
                      .....++.+.+++++|.+.+       .+++|+|||+|+..++.+.+-.          +++.|+++..+|.+...    
T Consensus        58 ~~~~~~l~~~la~~~g~~~~-------~v~~~~g~t~a~~~~~~~~~~~----------~gd~vl~~~~~~~~~~~~~~~  120 (390)
T 1elu_A           58 QQLIAQLRQALAETFNVDPN-------TITITDNVTTGCDIVLWGLDWH----------QGDEILLTDCEHPGIIAIVQA  120 (390)
T ss_dssp             HHHHHHHHHHHHHHTTSCGG-------GEEEESSHHHHHHHHHHHSCCC----------TTCEEEEETTCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCHH-------HEEEeCChHHHHHHHHhCCCCC----------CCCEEEEecCcccHHHHHHHH
Confidence            45566788889999998654       5899999999998887766211          56788889999988654    


Q ss_pred             HHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHH----HhCCEE
Q 037144          191 AAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAK----QFGIWV  266 (502)
Q Consensus       191 aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~----~~g~~l  266 (502)
                      .++..|.   +++.+|++...++.+|+++|+++|+++      +.+|+++.++|++|.+.|+++|.++|+    +||+++
T Consensus       121 ~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~l  191 (390)
T 1elu_A          121 IAARFGI---TYRFFPVAATLNQGDAAAVLANHLGPK------TRLVILSHLLWNTGQVLPLAEIMAVCRRHQGNYPVRV  191 (390)
T ss_dssp             HHHHHCC---EEEEECCGGGSSSSCHHHHHHTTCCTT------EEEEEEESBCTTTCCBCCHHHHHHHHHHCCSSSCCEE
T ss_pred             HHHHhCc---EEEEEcCCCCCCccchHHHHHHhcCCC------ceEEEEeccccCCceecCHHHHHHHHhhhhhhcCcEE
Confidence            4677899   999999863235789999999988643      457888999999999999999999999    999999


Q ss_pred             EeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCC-cccccCccCCCCCccccc
Q 037144          267 HVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTN-PQYLKNEATDQEPKEQEV  345 (502)
Q Consensus       267 hVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~-~~yl~~~~~~~~~~~~~~  345 (502)
                      ++|++|+.+....+ .    .. ...|+++.++|||+++|.++|++++++.. .. .+... ..+.......   ....+
T Consensus       192 i~Dea~~~g~~~~~-~----~~-~~~d~~~~s~~K~~~~~~g~G~~~~~~~~-~~-~~~~~~~g~~~~~~~~---~~~~~  260 (390)
T 1elu_A          192 LVDGAQSAGSLPLD-F----SR-LEVDYYAFTGHKWFAGPAGVGGLYIHGDC-LG-EINPTYVGWRSITYGA---KGEPT  260 (390)
T ss_dssp             EEECTTTBTTBCCC-T----TT-SCCSEEEEESSSTTCCCTTCEEEEECTTT-GG-GCCCCSCCTTTEEECT---TSCEE
T ss_pred             EEEcccccCCcCCC-h----hh-cCCCEEEccccccccCCCceEEEEECHHh-Hh-hcCCccccCCcccccc---cCccc
Confidence            99999976543321 1    11 26899999999999999999999987542 22 22110 0000000000   00000


Q ss_pred             CCCc--ccccCCCC--CCchHHHHHHHHhcHHH-HHHHHHHHHHHHHHHHHHHhcCCCeEEecC--CCeeEEEEEeecCc
Q 037144          346 GYKD--WQITLCRR--FRSLKLWVVIRNFGVAN-LRNFIRSHVGMAKLFERLVTSDKRFEVAFP--RNFSLVCFRVTPSA  418 (502)
Q Consensus       346 ~~~~--~~~~~sr~--~~al~~~~~l~~~g~~g-~~~~~~~~~~la~~l~~~l~~~~~~~l~~~--~~~~~v~f~~~~~~  418 (502)
                      ++.+  ..+..+..  .....+..+++.+...+ ++++.++..++++++.+.|+++++++++.+  +..++++|.+.+. 
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~-  339 (390)
T 1elu_A          261 GWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQLPHVHCLATSAPQAGLVSFTVDSP-  339 (390)
T ss_dssp             EECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSTTEEESCSSCCSSSEEEEEECSS-
T ss_pred             ccccchHhhCCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhcCCcEEecCccccccEEEEEcCCC-
Confidence            0000  01111111  11234445666654445 888999999999999999999889998753  3567888866421 


Q ss_pred             chhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144          419 VMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEH  498 (502)
Q Consensus       419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~  498 (502)
                      .                         +  ..++.++|.++|..+..+.   +..++|+++. ..++++++++++++|+++
T Consensus       340 ~-------------------------~--~~~~~~~l~~~gi~v~~~~---~~~~iRis~~-~~~~~~~i~~~~~~l~~~  388 (390)
T 1elu_A          340 L-------------------------G--HRAIVQKLEEQRIYLRTIA---DPDCIRACCH-YITDEEEINHLLARLADF  388 (390)
T ss_dssp             S-------------------------C--HHHHHHHHHHTTEECEEET---TTTEEEEECC-TTCCHHHHHHHHHHHTTC
T ss_pred             C-------------------------C--HHHHHHHHHHCCEEEEecC---CCCeEEEecc-cCCCHHHHHHHHHHHHhh
Confidence            1                         0  2356677777786543332   3468999984 456778999999998764

>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1

Probab=99.94  E-value=2.5e-25  Score=223.05  Aligned_cols=333  Identities=12%  Similarity=0.088  Sum_probs=221.8

Q ss_pred             ccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHH
Q 037144           79 YFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLT  158 (502)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~  158 (502)
                      ||+....++ ++..+.+.+...+..    |..+.+..++++++.+++++++|.+.+       .+++|+|||+|+..++.
T Consensus        17 ~l~~~~~~~-~~~~v~~a~~~~~~~----~~~~~g~~~~~~~~~~~l~~~~g~~~~-------~v~~~~g~t~a~~~~~~   84 (359)
T 1svv_A           17 SFVNDYSVG-MHPKILDLMARDNMT----QHAGYGQDSHCAKAARLIGELLERPDA-------DVHFISGGTQTNLIACS   84 (359)
T ss_dssp             ECSCSCSSC-CCHHHHHHHHHHTTC----CCCSTTCSHHHHHHHHHHHHHHTCTTS-------EEEEESCHHHHHHHHHH
T ss_pred             EecCCCcCC-CCHHHHHHHHHHHhh----ccccccccHHHHHHHHHHHHHhCCCCc-------cEEEeCCchHHHHHHHH
Confidence            454433333 344455666665543    333345567888999999999997654       58999999999998888


Q ss_pred             HHHHHHHHHhCccCCCCeEEEeCCCCchhHHH--HHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHH-hcCCccE
Q 037144          159 AARDRVLKKIGRENISKLVVYSSDQTHCAFQK--AAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDV-EAELIPL  235 (502)
Q Consensus       159 ~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~--aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~-~~g~~p~  235 (502)
                      +++.           +++.|+++..+|+++..  .++..|+   +++.+|.+   ++.+|+++|++++++.. +.+..+.
T Consensus        85 ~~~~-----------~gd~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~---~~~~d~~~l~~~l~~~~~~~~~~~~  147 (359)
T 1svv_A           85 LALR-----------PWEAVIATQLGHISTHETGAIEATGH---KVVTAPCP---DGKLRVADIESALHENRSEHMVIPK  147 (359)
T ss_dssp             HHCC-----------TTEEEEEETTSHHHHSSTTHHHHTTC---CEEEECCT---TSCCCHHHHHHHHHHSCSTTSCEEE
T ss_pred             HHhC-----------CCCEEEEcccchHHHHHHHHHhcCCC---eeEEEeCC---CCeecHHHHHHHHHHHHhccCCCce
Confidence            7753           57789999999999888  4788899   99999985   46899999999998641 2233456


Q ss_pred             EEEEecCCccccccCC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCC-CCCCeeEEccCCcCCCCCcceE
Q 037144          236 FLCATVGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGV-ECVDSFSFNPHKWLFTTLDCCC  311 (502)
Q Consensus       236 ~Vv~t~gtt~~G~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~-~~aDsi~~~~hK~l~~p~~~g~  311 (502)
                      +|+++.+ |++|.+.|   +++|.++|++||+|+|+|++|.++.+.........-++ ..+|++++++||++ .|.++|+
T Consensus       148 ~v~~~~~-~ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~g-~~~~~g~  225 (359)
T 1svv_A          148 LVYISNT-TEVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKAG-GMFGEAL  225 (359)
T ss_dssp             EEEEESS-CTTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCSEEEEECTTTT-CSSCEEE
T ss_pred             EEEEEcC-CCCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcchhhhhhhhcCCEEEEecccCC-CCCceEE
Confidence            7888877 68999988   99999999999999999999954322111110000000 26899999999985 5778888


Q ss_pred             EEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHH
Q 037144          312 LWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFER  391 (502)
Q Consensus       312 ~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~  391 (502)
                      +++++. ... .+.   .+.....              .....+.  .....  ....+..+++.++.++..++++++.+
T Consensus       226 l~~~~~-~~~-~~~---~~~~~~~--------------~~~~~~~--~~~~~--~~~~l~~~~~~~~~~~~~~~~~~l~~  282 (359)
T 1svv_A          226 IILNDA-LKP-NAR---HLIKQRG--------------ALMAKGW--LLGIQ--FEVLMKDNLFFELGAHSNKMAAILKA  282 (359)
T ss_dssp             EECSGG-GCT-THH---HHHHHTT--------------CCCTTTH--HHHHH--HHHHTSTTHHHHHHHHHHHHHHHHHH
T ss_pred             EEEccc-HHH-HHH---HHHhcCC--------------cccccch--hhHHH--HHHHHhhhhHHHHHHHHHHHHHHHHH
Confidence            887543 211 111   0100000              0000000  01111  12234456678889999999999999


Q ss_pred             HHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcEEEEeeeECC
Q 037144          392 LVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKVFMTHAIVGG  470 (502)
Q Consensus       392 ~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~g  470 (502)
                      .| +.+++++..+...+++++.+.                                 .++.+++.++ |..+.. ....+
T Consensus       283 ~L-~~~~~~~~~~~~~~~~~~~~~---------------------------------~~~~~~l~~~~gi~v~~-~~~~~  327 (359)
T 1svv_A          283 GL-EACGIRLAWPSASNQLFPILE---------------------------------NTMIAELNNDFDMYTVE-PLKDG  327 (359)
T ss_dssp             HH-HHTTCCBSSCCSSSEECBEEE---------------------------------HHHHHHHTTTEECEEEE-EETTT
T ss_pred             Hh-ccCCeEEccCCccceEEEEcC---------------------------------HHHHHHHHHhcCEEEEe-cccCC
Confidence            99 567888775555555544331                                 2567778888 875522 11235


Q ss_pred             EEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          471 IYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       471 ~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      ..++|++++ ..+++++++++++.|+++.++
T Consensus       328 ~~~iRi~~~-~~~~~~~i~~~~~~l~~~~~~  357 (359)
T 1svv_A          328 TCIMRLCTS-WATEEKECHRFVEVLKRLVAS  357 (359)
T ss_dssp             EEEEEEECC-TTCCHHHHHHHHHHHHHC---
T ss_pred             CceEEEEcc-CcCCHHHHHHHHHHHHHHHhc
Confidence            789999964 556788999999999987654

>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*

Probab=99.94  E-value=1.9e-26  Score=232.57  Aligned_cols=302  Identities=14%  Similarity=0.098  Sum_probs=211.1

Q ss_pred             HHHHHHHHHH-HHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHH
Q 037144          115 VELENIVMDW-LGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQ  193 (502)
Q Consensus       115 ~~le~~~~~~-l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~  193 (502)
                      .....++.++ +++++|.+ .        +++|+|||+|+..++.++..           +++.|+++..+|+++..+++
T Consensus        52 ~~~~~~l~~~~la~~~~~~-~--------v~~~~g~t~a~~~~~~~~~~-----------~gd~vl~~~~~~~~~~~~~~  111 (371)
T 2e7j_A           52 TPPIHDFIHNQLPKFLGCD-V--------ARVTNGAREAKFAVMHSLAK-----------KDAWVVMDENCHYSSYVAAE  111 (371)
T ss_dssp             -CCHHHHHHTHHHHHTTSS-E--------EEEESSHHHHHHHHHHHHCC-----------TTCEEEEETTCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCC-E--------EEEeCChHHHHHHHHHHHhC-----------CCCEEEEccCcchHHHHHHH
Confidence            3455667788 89999876 2        79999999999888877642           57789999999999999999


Q ss_pred             HcCCCCCCEEEEe--cCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecc
Q 037144          194 IVGIDRKNIRAIK--TTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAA  271 (502)
Q Consensus       194 ~~Glg~~~v~~v~--~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA  271 (502)
                      ..|+   +++.+|  +++  ++.+|+++|++++++...+ ..+.+|+++.++|++|.+.|+++|.++|++||+++++|++
T Consensus       112 ~~g~---~~~~v~~~~~~--~~~~d~~~l~~~l~~~~~~-~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~li~D~a  185 (371)
T 2e7j_A          112 RAGL---NIALVPKTDYP--DYAITPENFAQTIEETKKR-GEVVLALITYPDGNYGNLPDVKKIAKVCSEYDVPLLVNGA  185 (371)
T ss_dssp             HTTC---EEEEECCCCTT--TCCCCHHHHHHHHHHHTTT-SCEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECT
T ss_pred             HcCC---eEEEeecccCC--CCCcCHHHHHHHHHhhccc-CCeEEEEEECCCCCCcccCCHHHHHHHHHHcCCeEEEECc
Confidence            9999   999999  764  4799999999999754321 2356899999999999999999999999999999999999


Q ss_pred             cccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCc-ccccCccCCCCCcccccCCCcc
Q 037144          272 YAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNP-QYLKNEATDQEPKEQEVGYKDW  350 (502)
Q Consensus       272 ~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~-~yl~~~~~~~~~~~~~~~~~~~  350 (502)
                      |+.+....+ ....     ++|+++.++||++++|.++|++++++.. ....+.... .+...                .
T Consensus       186 ~~~~~~~~~-~~~~-----~~di~~~s~sK~~~~~~~~G~~~~~~~~-~~~~~~~~~~~~~~~----------------~  242 (371)
T 2e7j_A          186 YAIGRMPVS-LKEI-----GADFIVGSGHKSMAASGPIGVMGMKEEW-AEIVLRRSEKYKNKE----------------V  242 (371)
T ss_dssp             TTBTTBCCC-HHHH-----TCSEEEEEHHHHSSCCSSCEEEEECTTT-TTTTTCBCSSCTTSB----------------G
T ss_pred             cccCCCCCC-hhhc-----CCCEEEecCCcCCCCCCCcEEEEEechh-hhhhccccccCcccc----------------c
Confidence            988765322 1211     5789999999999988899999987642 111011110 01100                0


Q ss_pred             cccC-CCCCC-chHHHHHHHHhcHHHHHHHHHHH--HHHHHHHHHHHhcCCCeEEecCC--CeeEEEEEeecCcchhhhh
Q 037144          351 QITL-CRRFR-SLKLWVVIRNFGVANLRNFIRSH--VGMAKLFERLVTSDKRFEVAFPR--NFSLVCFRVTPSAVMDKLR  424 (502)
Q Consensus       351 ~~~~-sr~~~-al~~~~~l~~~g~~g~~~~~~~~--~~la~~l~~~l~~~~~~~l~~~~--~~~~v~f~~~~~~~~~~~~  424 (502)
                      .+.. +.... ...+..+++.+..    ++.++.  .++++++.+.|+++ ++++..++  ..+++++.+. .       
T Consensus       243 ~~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~-~-------  309 (371)
T 2e7j_A          243 ELLGCTARGATIITLMASFPHVRE----RIKRWDEEVEKARRFAAEMEKL-GIKQLGDNPHNHDLMFFHAE-V-------  309 (371)
T ss_dssp             GGTTCCCCSHHHHHHHHHHHHHHH----HGGGHHHHHHHHHHHHHHHHHT-TCEEESSSSCCSSEEEEECH-H-------
T ss_pred             ccccCCcCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHc-CcEEecCCCccCceEEEECC-C-------
Confidence            0001 11111 1222334443322    566677  88999999999988 89987553  4667777653 1       


Q ss_pred             hcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeE-C---C--EEEEE-EEecCCCCcHHHHHHHHHHHHH
Q 037144          425 TKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIV-G---G--IYVLR-FAAGNSMTMESHVRAAWTVVQE  497 (502)
Q Consensus       425 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~-~---g--~~~lR-~~~~~~~t~~~di~~~~~~l~~  497 (502)
                                             ..++.+.|.+.|..+.+ ... .   +  ..++| +++....++++++++++++|++
T Consensus       310 -----------------------~~~~~~~l~~~gi~~~~-~~~~~~~~g~~~~~iRii~~~~~~~~~~~i~~~~~~l~~  365 (371)
T 2e7j_A          310 -----------------------LYEISKKAKGGRFFLYR-ELKSRKIHGIKPGLTRYFKLSTYGLSDEEVDYVLNAFKE  365 (371)
T ss_dssp             -----------------------HHHHHHHSSSGGGHHHH-HHHHTTEECSCTTCCSEEEEECTTCCHHHHHHHHHHHHH
T ss_pred             -----------------------HHHHHHHHHHCCEEEEe-ccccccccCCCCCceEEEEeeccCCCHHHHHHHHHHHHH
Confidence                                   23455666666653322 110 0   1  46799 9987442577799999999999


Q ss_pred             HHHhC
Q 037144          498 HLEAF  502 (502)
Q Consensus       498 ~~~~~  502 (502)
                      +.+++
T Consensus       366 ~~~~~  370 (371)
T 2e7j_A          366 IIEKY  370 (371)
T ss_dssp             HHHHC
T ss_pred             HHHhc
Confidence            87754

>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1

Probab=99.94  E-value=5.1e-26  Score=227.90  Aligned_cols=300  Identities=15%  Similarity=0.098  Sum_probs=205.5

Q ss_pred             HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHH--H
Q 037144          115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKA--A  192 (502)
Q Consensus       115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a--a  192 (502)
                      ..++.++.+|+++++| ++.       .+++|+|||+|+..++.+++.           +++.|+++...|++...+  +
T Consensus        42 ~~~~~~l~~~la~~~g-~~~-------~v~~~~~gt~a~~~al~~~~~-----------~gd~vi~~~~~~~~~~~~~~~  102 (356)
T 1v72_A           42 DELTAQVKRKFCEIFE-RDV-------EVFLVPTGTAANALCLSAMTP-----------PWGNIYCHPASHINNDECGAP  102 (356)
T ss_dssp             SHHHHHHHHHHHHHHT-SCC-------EEEEESCHHHHHHHHHHTSCC-----------TTEEEEECTTSHHHHSSTTHH
T ss_pred             chHHHHHHHHHHHHhC-CCC-------cEEEeCCccHHHHHHHHHhcC-----------CCCEEEEcCccchhhhhchHH
Confidence            4567778899999999 432       479999999999888877643           678899999999988776  7


Q ss_pred             HHc--CCCCCCEEEEecCCCCCcccCHHHHHH-HHHHHH-hcCCccEEEEEecCCccccc---cCChhHHHHHHHHhCCE
Q 037144          193 QIV--GIDRKNIRAIKTTKSSSYGLSAESVLS-QINLDV-EAELIPLFLCATVGTTAITA---VDPLKPLCDVAKQFGIW  265 (502)
Q Consensus       193 ~~~--Glg~~~v~~v~~~~~~~~~~d~~~Le~-~i~~~~-~~g~~p~~Vv~t~gtt~~G~---idpl~eI~~i~~~~g~~  265 (502)
                      ..+  |.   +++.+|.+   ++.+|+++|++ ++++.. ..+.++.+|+++.++ ++|.   .+++++|+++|++||+|
T Consensus       103 ~~~~~g~---~~~~v~~~---~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~-~tG~~~~~~~l~~i~~~~~~~~~~  175 (356)
T 1v72_A          103 EFFSNGA---KLMTVDGP---AAKLDIVRLRERTREKVGDVHTTQPACVSITQAT-EVGSIYTLDEIEAIGDVCKSSSLG  175 (356)
T ss_dssp             HHHTTSC---EEEECCCG---GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSC-TTSCCCCHHHHHHHHHHHHHTTCE
T ss_pred             HHHhCCc---EEEEecCC---CCeEcHHHHHHHhhhcchhhccCCceEEEEEcCC-CCCccCCHHHHHHHHHHHHHcCCe
Confidence            777  88   89888875   46899999999 886421 122246678888876 4999   67899999999999999


Q ss_pred             EEeecccccccccCccchhhhcCC-CCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccc
Q 037144          266 VHVDAAYAGSACICPEFRHFIDGV-ECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQE  344 (502)
Q Consensus       266 lhVDaA~g~~~~~~~~~~~~~~~~-~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~  344 (502)
                      +|+|++|+.+............++ ..+|++++++||+ +.|.|+|+++. ++..... +.    ++....       +.
T Consensus       176 li~D~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~-g~~~G~g~~~~-~~~~~~~-~~----~~~~~~-------~~  241 (356)
T 1v72_A          176 LHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKN-GVLAAEAIVLF-NTSLATE-MS----YRRKRA-------GH  241 (356)
T ss_dssp             EEEEETTHHHHHHHHTCCTTTTTGGGTCCEEEECCGGG-TCSSCEEEEES-SGGGHHH-HH----HHHHHT-------TC
T ss_pred             EEEEchhhHhHhccCCCCHHHhhhhhcCCEEEEecccC-CCcCccEEEEE-CHHHHhh-HH----HHhhcc-------Cc
Confidence            999999975432111111111111 2689999999999 66877778876 3433221 11    110000       00


Q ss_pred             cCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhh
Q 037144          345 VGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLR  424 (502)
Q Consensus       345 ~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~  424 (502)
                             .   ..........+++.+..+.+.++.++..++++++.+.|++++++++..++..+++++.+.         
T Consensus       242 -------~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~---------  302 (356)
T 1v72_A          242 -------L---SSKMRFLSAQIDAYLTDDLWLRNARKANAAAQRLAQGLEGLGGVEVLGGTEANILFCRLD---------  302 (356)
T ss_dssp             -------C---CSSTHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEESCCCSSEEEEEEC---------
T ss_pred             -------h---hhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhCCCcEEccCCCccEEEEEcC---------
Confidence                   0   000112233345555445566778888999999999999988999876666666666542         


Q ss_pred             hcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144          425 TKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       425 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~  500 (502)
                                          .    ++.++|.++|..+.++. +. ..++|+++ +..+++++++++++.|+++.+
T Consensus       303 --------------------~----~~~~~l~~~gi~v~~g~-~~-~~~iRi~~-~~~~~~~~i~~~~~~l~~~l~  351 (356)
T 1v72_A          303 --------------------S----AMIDALLKAGFGFYHDR-WG-PNVVRFVT-SFATTAEDVDHLLNQVRLAAD  351 (356)
T ss_dssp             --------------------H----HHHHHHHHTTCBCBCSS-SS-TTEEEEEC-CTTCCHHHHHHHHHHHHHTC-
T ss_pred             --------------------H----HHHHHHHhcCeEEeccc-cC-CCeEEEEe-cCCCCHHHHHHHHHHHHHHHH
Confidence                                1    45666667786543322 32 56899996 456778899999999988754

>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1

Probab=99.94  E-value=1.2e-25  Score=228.45  Aligned_cols=330  Identities=10%  Similarity=0.062  Sum_probs=224.7

Q ss_pred             HHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCc
Q 037144           91 GIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGR  170 (502)
Q Consensus        91 ~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~  170 (502)
                      ..+.+.+...++.....|...++..++++.+.+|+.+.+|++...     ...++|+||++|+..++.+...        
T Consensus        46 ~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~-----~~v~~~~g~~~a~~~~~~~~~~--------  112 (388)
T 1j32_A           46 KHIVEAAKAALEQGKTRYGPAAGEPRLREAIAQKLQRDNGLCYGA-----DNILVTNGGKQSIFNLMLAMIE--------  112 (388)
T ss_dssp             HHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCG-----GGEEEESHHHHHHHHHHHHHCC--------
T ss_pred             HHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCh-----hhEEEcCCHHHHHHHHHHHhcC--------
Confidence            445555555553333456555667899999999999999874221     2689999999999888776643        


Q ss_pred             cCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc-
Q 037144          171 ENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV-  249 (502)
Q Consensus       171 ~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i-  249 (502)
                         +++.|+++..+|.++..+++..|+   +++.+|+++++++.+|+++|+++++++      +.+|+++.++|++|.+ 
T Consensus       113 ---~gd~vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~nptG~~~  180 (388)
T 1j32_A          113 ---PGDEVIIPAPFWVSYPEMVKLAEG---TPVILPTTVETQFKVSPEQIRQAITPK------TKLLVFNTPSNPTGMVY  180 (388)
T ss_dssp             ---TTCEEEEESSCCTHHHHHHHHTTC---EEEEECCCGGGTTCCCHHHHHHHCCTT------EEEEEEESSCTTTCCCC
T ss_pred             ---CCCEEEEcCCCChhHHHHHHHcCC---EEEEecCCcccCCCCCHHHHHHhcCcC------ceEEEEeCCCCCCCcCC
Confidence               567888999999999999999999   999999875335789999999998643      3477888899999998 


Q ss_pred             --CChhHHHHHHHHhCCEEEeecccccccccCcc---chhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhh
Q 037144          250 --DPLKPLCDVAKQFGIWVHVDAAYAGSACICPE---FRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLST  323 (502)
Q Consensus       250 --dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~---~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~  323 (502)
                        +++++|+++|++||+++++|++|+.+.+....   .........+.|.++.++||+++.| ..+|+++.++. .. +.
T Consensus       181 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~-~~-~~  258 (388)
T 1j32_A          181 TPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGPVP-LV-KA  258 (388)
T ss_dssp             CHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCEEEECCHH-HH-HH
T ss_pred             CHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeechhccCCcccceEEEEeCHH-HH-HH
Confidence              45999999999999999999999876542211   1111000125788999999999644 34888887543 22 22


Q ss_pred             hcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 037144          324 LSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSDKRFEV  401 (502)
Q Consensus       324 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l  401 (502)
                      +.....+..                 +      ....+..+++...+  +.+.++++.++..++++++.+.|+++|++++
T Consensus       259 l~~~~~~~~-----------------~------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~  315 (388)
T 1j32_A          259 ATKIQGHST-----------------S------NVCTFAQYGAIAAYENSQDCVQEMLAAFAERRRYMLDALNAMPGLEC  315 (388)
T ss_dssp             HHHHHHTTT-----------------C------SCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHTCTTCBC
T ss_pred             HHHHHhhcc-----------------c------CCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHhhCCCCcc
Confidence            211000000                 0      01233334333333  4567888899999999999999999888887


Q ss_pred             ecCCCeeEEEE-EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh-cCcEEEEeeeECCEEEEEEEec
Q 037144          402 AFPRNFSLVCF-RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV-SGKVFMTHAIVGGIYVLRFAAG  479 (502)
Q Consensus       402 ~~~~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~g~~~lR~~~~  479 (502)
                      .. +..+++++ .+...+.                           ...++.+.+.+ .|..+.++..+....++|+++.
T Consensus       316 ~~-~~~~~~~~~~~~~~~~---------------------------~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~  367 (388)
T 1j32_A          316 PK-PDGAFYMFPSIAKTGR---------------------------SSLDFCSELLDQHQVATVPGAAFGADDCIRLSYA  367 (388)
T ss_dssp             CC-CCBTTEECCBCGGGTC---------------------------CHHHHHHHHHHHHCEECEEGGGGTCTTBEEEECC
T ss_pred             cC-CCeeEEEEEecCCCCC---------------------------CHHHHHHHHHHhCCEEEeChhhhCCCCcEEEEec
Confidence            64 44444433 2221000                           02356666665 5865444333333468999985


Q ss_pred             CCCCcHHHHHHHHHHHHHHHHh
Q 037144          480 NSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       480 ~~~t~~~di~~~~~~l~~~~~~  501 (502)
                         +++++|+++++.|+++.++
T Consensus       368 ---~~~~~i~~~~~~l~~~l~~  386 (388)
T 1j32_A          368 ---TDLDTIKRGMERLEKFLHG  386 (388)
T ss_dssp             ---SCHHHHHHHHHHHHHHHHH
T ss_pred             ---CCHHHHHHHHHHHHHHHHH
Confidence               4788999999999988764

>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*

Probab=99.94  E-value=2.1e-24  Score=222.26  Aligned_cols=298  Identities=14%  Similarity=0.060  Sum_probs=206.1

Q ss_pred             HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH
Q 037144          115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI  194 (502)
Q Consensus       115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~  194 (502)
                      .....++.+++++++|.+         ..+++++|++||..++.+...           ++++|+++...|.++..+++.
T Consensus       108 ~~~~~~l~~~la~~~g~~---------~~i~~~sGs~a~~~al~~l~~-----------~gd~vl~~~~~h~~~~~~~~~  167 (427)
T 2w8t_A          108 FHDHMEVEQALRDFYGTT---------GAIVFSTGYMANLGIISTLAG-----------KGEYVILDADSHASIYDGCQQ  167 (427)
T ss_dssp             CHHHHHHHHHHHHHHTCS---------EEEEESCHHHHHHHHHHHHSC-----------TTCEEEEETTCCHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHhCCC---------ceEEecCcHHHHHHHHHHhcC-----------CCCEEEECCcccHHHHHHHHH
Confidence            355666778888888875         257778888999877766432           567888999999999999999


Q ss_pred             cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccccc
Q 037144          195 VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAG  274 (502)
Q Consensus       195 ~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~  274 (502)
                      .|.   +++.+|       .+|+++|+++|++...  ..+.+|+++.+.+++|.+.|+++|.++|++||+++++|++|++
T Consensus       168 ~g~---~~~~~~-------~~d~~~le~~l~~~~~--~~~~~v~~~~~~n~tG~~~~l~~l~~l~~~~g~~li~Dea~~~  235 (427)
T 2w8t_A          168 GNA---EIVRFR-------HNSVEDLDKRLGRLPK--EPAKLVVLEGVYSMLGDIAPLKEMVAVAKKHGAMVLVDEAHSM  235 (427)
T ss_dssp             SCS---EEEEEC-------TTCHHHHHHHHHTSCS--SSCEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTT
T ss_pred             cCC---eeEEeC-------CCCHHHHHHHHHhccC--CCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEECCccc
Confidence            998   888776       3589999999975311  1356888888899999999999999999999999999999988


Q ss_pred             ccccCccchhhh--cCC-CCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcC-CcccccCccCCCCCcccccCCCcc
Q 037144          275 SACICPEFRHFI--DGV-ECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLST-NPQYLKNEATDQEPKEQEVGYKDW  350 (502)
Q Consensus       275 ~~~~~~~~~~~~--~~~-~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~  350 (502)
                      +.+.- ..+...  .++ .++|+++.++||+++.| + |+++.++ ... +.+.. ...|...                 
T Consensus       236 ~~~~~-~g~~~~~~~~~~~~~di~~~s~sK~~g~~-g-G~v~~~~-~l~-~~l~~~~~~~~~~-----------------  293 (427)
T 2w8t_A          236 GFFGP-NGRGVYEAQGLEGQIDFVVGTFSKSVGTV-G-GFVVSNH-PKF-EAVRLACRPYIFT-----------------  293 (427)
T ss_dssp             TTSST-TSCCHHHHTTCTTCCSEEEEESSSTTCSC-C-EEEEECC-TTG-GGGGGTCHHHHSS-----------------
T ss_pred             cccCC-CCCchHhhcCCCcCCcEEEecchhhhccC-C-CEEEeCH-HHH-HHHHHhccccccc-----------------
Confidence            76531 111111  122 36799999999999743 4 7777653 332 22221 1122211                 


Q ss_pred             cccCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-CeeEEEEEeecCcchhhhhhccc
Q 037144          351 QITLCRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR-NFSLVCFRVTPSAVMDKLRTKYK  428 (502)
Q Consensus       351 ~~~~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~-~~~~v~f~~~~~~~~~~~~~~~~  428 (502)
                         ++.. .....+..+++.+.  .+.++.++..++++++.+.|+++ ++++..++ ..+++++.+..            
T Consensus       294 ---~~~~~~~~aa~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~------------  355 (427)
T 2w8t_A          294 ---ASLPPSVVATATTSIRKLM--TAHEKRERLWSNARALHGGLKAM-GFRLGTETCDSAIVAVMLED------------  355 (427)
T ss_dssp             ---CCCCHHHHHHHHHHHHHHT--SCHHHHHHHHHHHHHHHHHHHHH-TCEESCSSCCSSEEEEEESS------------
T ss_pred             ---CCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHc-CCcccCCCCCCCEEEEEECC------------
Confidence               1111 11122234444432  24678888999999999999988 88887455 66777777642            


Q ss_pred             CCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeee---ECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          429 NGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAI---VGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       429 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~---~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                                      .....++.+.|.++|..+.....   ..+..++|++++. .+++++|++++++|+++.++
T Consensus       356 ----------------~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRi~~~~-~~t~e~i~~~~~~l~~~l~~  414 (427)
T 2w8t_A          356 ----------------QEQAAMMWQALLDGGLYVNMARPPATPAGTFLLRCSICA-EHTPAQIQTVLGMFQAAGRA  414 (427)
T ss_dssp             ----------------HHHHHHHHHHHHHTTEECEEECTTTSCTTCEEEEEECCT-TCCHHHHHHHHHHHHHHHHH
T ss_pred             ----------------HHHHHHHHHHHHHCCeEEeeeCCCCCCCCCeEEEEEeCC-CCCHHHHHHHHHHHHHHHHH
Confidence                            12245677888888864433321   1235799999864 45677999999999988654

>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1

Probab=99.93  E-value=6.3e-25  Score=224.60  Aligned_cols=327  Identities=10%  Similarity=0.066  Sum_probs=222.1

Q ss_pred             HHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCc
Q 037144           91 GIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGR  170 (502)
Q Consensus        91 ~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~  170 (502)
                      ..+.+.+...+......|...++..++++.+.+|+.+.+|++...     ..+++|+||++|+..++.+...        
T Consensus        57 ~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~-----~~v~~t~g~~~al~~~~~~l~~--------  123 (406)
T 1xi9_A           57 EHMKEAYCKAIKEGHNYYGDSEGLPELRKAIVEREKRKNGVDITP-----DDVRVTAAVTEALQLIFGALLD--------  123 (406)
T ss_dssp             HHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCG-----GGEEEESHHHHHHHHHHHHHCC--------
T ss_pred             HHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCCH-----HHEEEcCChHHHHHHHHHHhCC--------
Confidence            334455544443332345555567899999999999988864321     2689999999999888776532        


Q ss_pred             cCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC
Q 037144          171 ENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD  250 (502)
Q Consensus       171 ~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id  250 (502)
                         +++.|+++..+|.++..+++..|+   +++.+|+++++++.+|+++|+++++++      +.+|+++.++|++|.+-
T Consensus       124 ---~gd~Vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~i~~p~nptG~~~  191 (406)
T 1xi9_A          124 ---PGDEILVPGPSYPPYTGLVKFYGG---KPVEYRTIEEEDWQPDIDDIRKKITDR------TKAIAVINPNNPTGALY  191 (406)
T ss_dssp             ---TTCEEEEEESCCHHHHHHHHHTTC---EEEEEEEEGGGTSEECHHHHHHHCCTT------EEEEEEESSCTTTCCCC
T ss_pred             ---CCCEEEEcCCCCccHHHHHHHcCC---EEEEeecCCCcCCcCCHHHHHHhhCcC------ceEEEEECCCCCCCCCc
Confidence               567888999999999999999999   999999875334689999999998643      34777888999999986


Q ss_pred             C---hhHHHHHHHHhCCEEEeecccccccccCc--cchhhhcCCCCC-CeeEEccCCcCCCC-CcceEEE--eeCc---h
Q 037144          251 P---LKPLCDVAKQFGIWVHVDAAYAGSACICP--EFRHFIDGVECV-DSFSFNPHKWLFTT-LDCCCLW--VKDP---S  318 (502)
Q Consensus       251 p---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~--~~~~~~~~~~~a-Dsi~~~~hK~l~~p-~~~g~~~--~r~~---~  318 (502)
                      |   +++|+++|++||+|+++|++|+.+....+  .... +.  ... |.++.++||+++.| ..+|+++  .++.   .
T Consensus       192 ~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~-~~--~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~  268 (406)
T 1xi9_A          192 DKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGS-LT--KDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKLSE  268 (406)
T ss_dssp             CHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHH-HC--SSSCEEEEEESTTTTCCGGGCCEEEEEECTTCTTHH
T ss_pred             CHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHH-cC--CCceEEEEeccccccCCCccEEEEEEEecCchhHHH
Confidence            5   99999999999999999999988654111  1111 11  244 67888999999733 3478887  4331   3


Q ss_pred             hhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcC
Q 037144          319 CLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSD  396 (502)
Q Consensus       319 ~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~  396 (502)
                      .. +.+.....+..                      +  ...+..+++...+  +.++++++.++..++++++.+.|+++
T Consensus       269 l~-~~l~~~~~~~~----------------------~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~  323 (406)
T 1xi9_A          269 VR-EAIDRLARIRL----------------------C--PNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYIYKRLNEI  323 (406)
T ss_dssp             HH-HHHHHHHHHTC----------------------C--SCSHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred             HH-HHHHHHHHhhc----------------------C--CCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            32 22211111100                      0  0122233333332  45668888899999999999999999


Q ss_pred             CCeEEecCCCeeEEEE-EeecC-cchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeEC--CE
Q 037144          397 KRFEVAFPRNFSLVCF-RVTPS-AVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVG--GI  471 (502)
Q Consensus       397 ~~~~l~~~~~~~~v~f-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~  471 (502)
                      |++++. ++..++++| .+... +.                         +  ..++.+++. +.|..+.++..+.  +.
T Consensus       324 ~~~~~~-~~~~~~~~~~~~~~~~~~-------------------------~--~~~l~~~l~~~~gi~v~~g~~f~~~~~  375 (406)
T 1xi9_A          324 PGISTT-KPQGAFYIFPKIEVGPWK-------------------------N--DKEFVLDVLHNAHVLFVHGSGFGEYGA  375 (406)
T ss_dssp             TTEECC-CCCBSSEECCEECSCSCS-------------------------S--HHHHHHHHHHHHCEECEEGGGGCGGGT
T ss_pred             CCCeee-cCCeeEEEEEecCccCCC-------------------------C--HHHHHHHHHHhCCEEEeCchhcCCCCC
Confidence            898876 444455554 44320 10                         0  235666665 5686544433332  24


Q ss_pred             EEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          472 YVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       472 ~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      .++|++++   +++++|+++++.|.++.++
T Consensus       376 ~~lRis~~---~~~~~i~~~~~~l~~~l~~  402 (406)
T 1xi9_A          376 GHFRAVFL---PPIEILEEAMDRFEKFMKE  402 (406)
T ss_dssp             TBEEEECC---SCHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEEec---CCHHHHHHHHHHHHHHHHH
Confidence            68999986   6778999999999988765

>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3

Probab=99.93  E-value=1.3e-24  Score=222.82  Aligned_cols=311  Identities=15%  Similarity=0.146  Sum_probs=206.0

Q ss_pred             HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCC-eEEEeCCCCchhHHHHH--
Q 037144          116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISK-LVVYSSDQTHCAFQKAA--  192 (502)
Q Consensus       116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~-~~v~~s~~~H~s~~~aa--  192 (502)
                      ....++.+++++++|.+.+       .+++|+|+++++..++.+++......     .++ .+|+++...|.++..+.  
T Consensus        71 ~~~~~l~~~la~~~g~~~~-------~v~~~~g~t~al~~al~~~~~~~~~~-----~~gd~vii~~~~~~~~~~~~~~~  138 (416)
T 1qz9_A           71 DLSERLGNRLATLIGARDG-------EVVVTDTTSINLFKVLSAALRVQATR-----SPERRVIVTETSNFPTDLYIAEG  138 (416)
T ss_dssp             GHHHHHHHHHHTTTTCCTT-------SEEECSCHHHHHHHHHHHHHHHHHHH-----STTCCEEEEETTSCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCcc-------cEEEeCChhHHHHHHHHhhccccccc-----CCCCcEEEEcCCCCCchHHHHHH
Confidence            4556788999999998643       58899999998877777665210000     033 36777878998766543  


Q ss_pred             --HHc--CCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEe
Q 037144          193 --QIV--GIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHV  268 (502)
Q Consensus       193 --~~~--Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhV  268 (502)
                        +..  |+   +++.+|+         +++|+++|+++      +.+|+++.++|++|.+.|+++|.++|++||+|+|+
T Consensus       139 ~~~~~~~g~---~~~~v~~---------~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~  200 (416)
T 1qz9_A          139 LADMLQQGY---TLRLVDS---------PEELPQAIDQD------TAVVMLTHVNYKTGYMHDMQALTALSHECGALAIW  200 (416)
T ss_dssp             HHHHHCSSC---EEEEESS---------GGGHHHHCSTT------EEEEEEESBCTTTCBBCCHHHHHHHHHHHTCEEEE
T ss_pred             HHHHhcCCc---eEEEeCc---------HHHHHHHhCCC------ceEEEEeccccCcccccCHHHHHHHHHHcCCEEEE
Confidence              334  88   8888875         56788877542      45899999999999999999999999999999999


Q ss_pred             ecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcc-eEEEeeCchhhhhhhcC-CcccccCccCCCCCcccccC
Q 037144          269 DAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDC-CCLWVKDPSCLLSTLST-NPQYLKNEATDQEPKEQEVG  346 (502)
Q Consensus       269 DaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~-g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~  346 (502)
                      |++|+.+....+ ....     ++|++++++||+++.+.++ |++++++... . .+.. ...|........  ....+.
T Consensus       201 D~a~~~g~~~~~-~~~~-----~~d~~~~s~~K~l~~g~~~~g~l~~~~~~~-~-~l~~~~~g~~g~~~~~~--~~~~~~  270 (416)
T 1qz9_A          201 DLAHSAGAVPVD-LHQA-----GADYAIGCTYKYLNGGPGSQAFVWVSPQLC-D-LVPQPLSGWFGHSRQFA--MEPRYE  270 (416)
T ss_dssp             ECTTTTTTSCCC-HHHH-----TCSEEEECSSSTTCCCTTCCCEEEECTTTT-T-TSCCSCCCGGGBCTTSC--CCSSCC
T ss_pred             EccccccCcCCC-hhhc-----CCCEEEecCcccCCCCCCCeEEEEECHHHH-h-ccCCCccccCccccccC--CCCccC
Confidence            999986544332 2221     5899999999999777777 9998875521 1 1211 111111000000  000000


Q ss_pred             CC--cccccCCC-C-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC-C--CeEEecCC----CeeEEEEEee
Q 037144          347 YK--DWQITLCR-R-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD-K--RFEVAFPR----NFSLVCFRVT  415 (502)
Q Consensus       347 ~~--~~~~~~sr-~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~-~--~~~l~~~~----~~~~v~f~~~  415 (502)
                      +.  ......+. . ....++..+++.+..++++++.++..++++++.+.|+++ |  ++++..+.    ..++++|.+.
T Consensus       271 ~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  350 (416)
T 1qz9_A          271 PSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTDLFIELVEQRCAAHELTLVTPREHAKRGSHVSFEHP  350 (416)
T ss_dssp             BCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHTTSCCEECSCSSGGGBCSEEEEECT
T ss_pred             CCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhccCCCeEEeCCCCHHHcCCEEEEecC
Confidence            00  00111111 1 112344566766666788899999999999999999885 6  89887543    3567776653


Q ss_pred             cCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHH
Q 037144          416 PSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVV  495 (502)
Q Consensus       416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l  495 (502)
                      .                               ..++.+.|.++|... .   ..+..++|+++.++.++++||+++++.|
T Consensus       351 ~-------------------------------~~~l~~~l~~~gi~~-~---~~~~~~lRis~~~~~~t~~~i~~~~~~l  395 (416)
T 1qz9_A          351 E-------------------------------GYAVIQALIDRGVIG-D---YREPRIMRFGFTPLYTTFTEVWDAVQIL  395 (416)
T ss_dssp             T-------------------------------HHHHHHHHHTTTEEC-E---EETTTEEEEECCTTTCCHHHHHHHHHHH
T ss_pred             C-------------------------------HHHHHHHHHhCCcEe-c---cCCCCeEEEeCcccCCCHHHHHHHHHHH
Confidence            1                               235677777778542 2   2245689999864467888999999999


Q ss_pred             HHHHHh
Q 037144          496 QEHLEA  501 (502)
Q Consensus       496 ~~~~~~  501 (502)
                      +++.++
T Consensus       396 ~~~~~~  401 (416)
T 1qz9_A          396 GEILDR  401 (416)
T ss_dssp             HHHHHH
T ss_pred             HHHHhc
Confidence            987653

>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1

Probab=99.93  E-value=2.7e-25  Score=227.60  Aligned_cols=325  Identities=11%  Similarity=0.042  Sum_probs=224.7

Q ss_pred             HHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCc
Q 037144           91 GIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGR  170 (502)
Q Consensus        91 ~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~  170 (502)
                      ..+.+.+ ..+......|...++..++++.+.+|+.+.+|.+...     ..+++|+|||+|+..++.+...        
T Consensus        59 ~~v~~a~-~~l~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~-----~~v~~~~g~t~a~~~~~~~~~~--------  124 (409)
T 2gb3_A           59 EVFFERI-YENKPEVVYYSHSAGIWELREAFASYYKRRQRVDVKP-----ENVLVTNGGSEAILFSFAVIAN--------  124 (409)
T ss_dssp             THHHHHH-HHTCCSSCCCCCTTCCHHHHHHHHHHHHHTSCCCCCG-----GGEEEESHHHHHHHHHHHHHCC--------
T ss_pred             HHHHHHH-HHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCH-----HHEEEeCCHHHHHHHHHHHhCC--------
Confidence            3455556 6665444456655667899999999999988864321     2689999999999888876532        


Q ss_pred             cCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC
Q 037144          171 ENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD  250 (502)
Q Consensus       171 ~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id  250 (502)
                         +++.|+++..+|.++..+++..|.   +++.+|+++++++.+ +++|+++++++      +.+|+++.++|++|.+-
T Consensus       125 ---~gd~Vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~-~~~l~~~l~~~------~~~v~~~~p~nptG~~~  191 (409)
T 2gb3_A          125 ---PGDEILVLEPFYANYNAFAKIAGV---KLIPVTRRMEEGFAI-PQNLESFINER------TKGIVLSNPCNPTGVVY  191 (409)
T ss_dssp             ---TTCEEEEEESCCTHHHHHHHHHTC---EEEEEECCGGGTSCC-CTTGGGGCCTT------EEEEEEESSCTTTCCCC
T ss_pred             ---CCCEEEEcCCCchhHHHHHHHcCC---EEEEeccCCCCCCcc-HHHHHHhhCcC------CeEEEECCCCCCCCCCc
Confidence               567888999999999999999999   999999875333555 88888887542      44778888999999984


Q ss_pred             ---ChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcC
Q 037144          251 ---PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLST  326 (502)
Q Consensus       251 ---pl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~  326 (502)
                         ++++|+++|++||+++++|++|+++.... .....+.++...|+++.++||+++.| ..+|+++++++.... .+..
T Consensus       192 ~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~l~~-~l~~  269 (409)
T 2gb3_A          192 GKDEMRYLVEIAERHGLFLIVDEVYSEIVFRG-EFASALSIESDKVVVIDSVSKKFSACGARVGCLITRNEELIS-HAMK  269 (409)
T ss_dssp             CHHHHHHHHHHHHHTTCEEEEECTTTTCBCSS-CCCCGGGSCCTTEEEEEESTTTTTCGGGCCEEEECSCHHHHH-HHHH
T ss_pred             CHHHHHHHHHHHHHcCCEEEEECcccccccCC-CCCCccccCCCCEEEEecchhccCCccceEEEEEECcHHHHH-HHHH
Confidence               58999999999999999999998765422 11121334446789999999999744 347888887633322 2211


Q ss_pred             CcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC
Q 037144          327 NPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP  404 (502)
Q Consensus       327 ~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~  404 (502)
                      ...+.                   +     ....+..+++...+  +.++++++.++..++++++.+.|++. +++++..
T Consensus       270 ~~~~~-------------------~-----~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~  324 (409)
T 2gb3_A          270 LAQGR-------------------L-----APPLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKLEEH-GLKRFTK  324 (409)
T ss_dssp             HHHHS-------------------C-----CCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHT-TCCCBCC
T ss_pred             HHhcc-------------------C-----CCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHc-CceeeeC
Confidence            00000                   0     00223333333333  56778888999999999999999988 7887224


Q ss_pred             CCeeEEEE-EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc------CcEEEEeeeE-----CCEE
Q 037144          405 RNFSLVCF-RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS------GKVFMTHAIV-----GGIY  472 (502)
Q Consensus       405 ~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~------g~~~~~~~~~-----~g~~  472 (502)
                      +..++++| .+....                             ..++.++|.++      |..+.++..+     .+..
T Consensus       325 ~~~~~~~~~~~~~~~-----------------------------~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~  375 (409)
T 2gb3_A          325 PSGAFYITAELPVED-----------------------------AEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKK  375 (409)
T ss_dssp             CSBSSEEEEECSSSC-----------------------------HHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSS
T ss_pred             CCeeEEEEEEeCCCC-----------------------------HHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCC
Confidence            44444444 443110                             24567777766      7544433222     2357


Q ss_pred             EEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          473 VLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       473 ~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      ++|++++   +++++|+++++.|+++.++
T Consensus       376 ~iRis~~---~~~e~i~~~~~~l~~~l~~  401 (409)
T 2gb3_A          376 EIRIACV---LEKDLLSRAIDVLMEGLKM  401 (409)
T ss_dssp             EEEEECC---SCHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEeC---CCHHHHHHHHHHHHHHHHH
Confidence            9999976   5778999999999987654

>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*

Probab=99.93  E-value=1.2e-24  Score=220.94  Aligned_cols=326  Identities=11%  Similarity=0.073  Sum_probs=223.3

Q ss_pred             HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCC--CCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHH
Q 037144           90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDL--PKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKK  167 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~--~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~  167 (502)
                      +..+.+.+...+......|..  ...++++++.+++++++|.  +.+       ..++|+||++|+..++.+...     
T Consensus        47 ~~~v~~a~~~~~~~~~~~y~~--~~~~~~~~l~~~l~~~~g~~~~~~-------~v~~~~g~~~a~~~~~~~~~~-----  112 (391)
T 4dq6_A           47 APCIIDSLKNRLEQEIYGYTT--RPDSYNESIVNWLYRRHNWKIKSE-------WLIYSPGVIPAISLLINELTK-----  112 (391)
T ss_dssp             CHHHHHHHHHHHTTCCCCCBC--CCHHHHHHHHHHHHHHHCCCCCGG-------GEEEESCHHHHHHHHHHHHSC-----
T ss_pred             CHHHHHHHHHHHhCCCCCCCC--CCHHHHHHHHHHHHHHhCCCCcHH-------HeEEcCChHHHHHHHHHHhCC-----
Confidence            344556666666544444443  3478999999999999994  333       689999999999888776643     


Q ss_pred             hCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecC--CCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcc
Q 037144          168 IGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTT--KSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTA  245 (502)
Q Consensus       168 ~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~--~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~  245 (502)
                            +++.|+++..+|.++..+++..|.   +++.+|++  .++++.+|+++|++++++       +.+|+++.++|+
T Consensus       113 ------~gd~vl~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~d~~~l~~~l~~-------~~~v~i~~p~np  176 (391)
T 4dq6_A          113 ------ANDKIMIQEPVYSPFNSVVKNNNR---ELIISPLQKLENGNYIMDYEDIENKIKD-------VKLFILCNPHNP  176 (391)
T ss_dssp             ------TTCEEEECSSCCTHHHHHHHHTTC---EEEECCCEECTTSCEECCHHHHHHHCTT-------EEEEEEESSBTT
T ss_pred             ------CCCEEEEcCCCCHHHHHHHHHcCC---eEEeeeeeecCCCceEeeHHHHHHHhhc-------CCEEEEECCCCC
Confidence                  567888999999999999999999   99999987  345678999999999865       347888889999


Q ss_pred             cccc---CChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCC----CCCCeeEEccCCcCC-CCCcceEEEeeCc
Q 037144          246 ITAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGV----ECVDSFSFNPHKWLF-TTLDCCCLWVKDP  317 (502)
Q Consensus       246 ~G~i---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~----~~aDsi~~~~hK~l~-~p~~~g~~~~r~~  317 (502)
                      +|.+   +++++|+++|++||+++++|++|+.+......... +..+    .....++.++||+++ .+...|+++++++
T Consensus       177 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~-~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~  255 (391)
T 4dq6_A          177 VGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIP-MASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPDE  255 (391)
T ss_dssp             TTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCC-GGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCSH
T ss_pred             CCcCcCHHHHHHHHHHHHHcCCEEEeeccccccccCCCCccC-HHHcCccccCcEEEEEechhhccCcccceEEEEeCCH
Confidence            9999   78999999999999999999999775432211111 1111    022367789999996 4456788887764


Q ss_pred             hhhhhhhcCC-cccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc-
Q 037144          318 SCLLSTLSTN-PQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTS-  395 (502)
Q Consensus       318 ~~l~~~~~~~-~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~-  395 (502)
                      .... .+... ..+...                    .........+..++.. +.+.++++.++..++++++.+.|++ 
T Consensus       256 ~~~~-~~~~~~~~~~~~--------------------~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~  313 (391)
T 4dq6_A          256 KDYK-LLDDAFTRIDIK--------------------RNNCFSLVATEASYNN-GESWLESFLEYLESNIDFAIKYINEN  313 (391)
T ss_dssp             HHHH-HHHHHHHHTTCC--------------------CCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHH-HHHHHHHhhcCC--------------------CCCHHHHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            4322 22110 000000                    0000111222333333 4566888889999999999999988 


Q ss_pred             CCCeEEecCCCeeEEE-EEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcEEEEeeeEC--CE
Q 037144          396 DKRFEVAFPRNFSLVC-FRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKVFMTHAIVG--GI  471 (502)
Q Consensus       396 ~~~~~l~~~~~~~~v~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~--g~  471 (502)
                      +|++++.. +..+++. +.+...+.                           ...++.+.|.++ |..+.++..+.  +.
T Consensus       314 ~~~~~~~~-~~~~~~~~~~~~~~~~---------------------------~~~~~~~~l~~~~gi~v~~g~~~~~~~~  365 (391)
T 4dq6_A          314 MPKLKVRK-PEGTYLLWVDFSALGL---------------------------SDEELESILVQKGKVALNQGNSFGIGGS  365 (391)
T ss_dssp             CTTSEECC-CSBSSEEEEECGGGCC---------------------------CHHHHHHHHHHTTCEECEEGGGGCTTCT
T ss_pred             CCCCEecC-CCccEEEEEEhhhcCC---------------------------CHHHHHHHHHHhCCEEeeCchhhCCCCC
Confidence            78999874 4445544 44432110                           034677778887 76544433332  34


Q ss_pred             EEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144          472 YVLRFAAGNSMTMESHVRAAWTVVQEHL  499 (502)
Q Consensus       472 ~~lR~~~~~~~t~~~di~~~~~~l~~~~  499 (502)
                      .++|++++   +++++|+++++.|.++.
T Consensus       366 ~~iRis~~---~~~~~i~~~l~~l~~~l  390 (391)
T 4dq6_A          366 GYQRINLA---CPRSMLEEALIRIKNAI  390 (391)
T ss_dssp             TEEEEECC---SCHHHHHHHHHHHHHHH
T ss_pred             CeEEEEEc---CCHHHHHHHHHHHHHHh
Confidence            78999986   46789999999998865

>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*

Probab=99.93  E-value=5.2e-25  Score=223.73  Aligned_cols=330  Identities=11%  Similarity=0.048  Sum_probs=222.9

Q ss_pred             HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCc-EEEcCCchHHHHHHHHHHHHHHHHHh
Q 037144           90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGG-GVIQGTTCEALLCTLTAARDRVLKKI  168 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~-g~~t~ggt~a~~~al~~a~~~~~~~~  168 (502)
                      +..+.+.+...+......|....+..++++.+.+|+.+.+|.+...     .. .++|+||++++..++.+...      
T Consensus        41 ~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~-----~~~v~~~~g~~~a~~~~~~~~~~------  109 (389)
T 1gd9_A           41 PQHIKEYAKEALDKGLTHYGPNIGLLELREAIAEKLKKQNGIEADP-----KTEIMVLLGANQAFLMGLSAFLK------  109 (389)
T ss_dssp             CHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCT-----TTSEEEESSTTHHHHHHHTTTCC------
T ss_pred             CHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC-----CCeEEEcCChHHHHHHHHHHhCC------
Confidence            3445555555553333346555567899999999999998863211     26 89999999999887766532      


Q ss_pred             CccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144          169 GRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA  248 (502)
Q Consensus       169 ~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~  248 (502)
                           +++.|+++..+|.++..+++..|+   +++.+|+++++++.+|+++|+++++++      +.+|+++.++|++|.
T Consensus       110 -----~gd~vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~~~nptG~  175 (389)
T 1gd9_A          110 -----DGEEVLIPTPAFVSYAPAVILAGG---KPVEVPTYEEDEFRLNVDELKKYVTDK------TRALIINSPCNPTGA  175 (389)
T ss_dssp             -----TTCEEEEEESCCTTHHHHHHHHTC---EEEEEECCGGGTTCCCHHHHHHHCCTT------EEEEEEESSCTTTCC
T ss_pred             -----CCCEEEEcCCCchhHHHHHHHCCC---EEEEeccCCccCCCCCHHHHHHhcCcC------ceEEEEECCCCCCCc
Confidence                 567888899999999999999999   999999875334689999999998642      346777889999999


Q ss_pred             cC---ChhHHHHHHHHhCCEEEeecccccccccCccchhh--hcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhh
Q 037144          249 VD---PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF--IDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLS  322 (502)
Q Consensus       249 id---pl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~  322 (502)
                      +-   ++++|+++|++||+++++|++|+.+..........  +.+....|+++.++||+++.| ..+|++++++ ... +
T Consensus       176 ~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~-~~~-~  253 (389)
T 1gd9_A          176 VLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPS-WII-E  253 (389)
T ss_dssp             CCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGGCCEEEECCH-HHH-H
T ss_pred             CCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEecChhhcCCcccceEEEEECH-HHH-H
Confidence            86   59999999999999999999998865532111111  122346789999999998744 4478888753 322 2


Q ss_pred             hhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHH--HHHHHHHHHHHHHHHHHHHHhcCCC
Q 037144          323 TLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVA--NLRNFIRSHVGMAKLFERLVTSDKR  398 (502)
Q Consensus       323 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~--g~~~~~~~~~~la~~l~~~l~~~~~  398 (502)
                      .+.....+..                 +      ....+..+++...+  +.+  +++++.++..++++++.+.|+++ +
T Consensus       254 ~l~~~~~~~~-----------------~------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g  309 (389)
T 1gd9_A          254 RMVKFQMYNA-----------------T------CPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEM-G  309 (389)
T ss_dssp             HHHHHHTTTT-----------------C------SCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHT-T
T ss_pred             HHHHHHhhhc-----------------c------CCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHc-C
Confidence            2211100000                 0      00222233333333  334  67888899999999999999988 7


Q ss_pred             eEEecCCCeeE-EEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeEC--CEEEE
Q 037144          399 FEVAFPRNFSL-VCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVG--GIYVL  474 (502)
Q Consensus       399 ~~l~~~~~~~~-v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~l  474 (502)
                      +++.. +..++ +++.+.+.+.                         +  ..++.++|. +.|..+.++..+.  +..++
T Consensus       310 ~~~~~-~~~~~~~~~~~~~~~~-------------------------~--~~~~~~~l~~~~gi~v~~g~~~~~~~~~~i  361 (389)
T 1gd9_A          310 LPTVK-PKGAFYIFPRIRDTGL-------------------------T--SKKFSELMLKEARVAVVPGSAFGKAGEGYV  361 (389)
T ss_dssp             CCCCC-CCBTTEECCBCGGGTC-------------------------C--HHHHHHHHHHHTCEECEEGGGGCGGGTTBE
T ss_pred             CeecC-CCeeeEEEEeccCCCC-------------------------C--HHHHHHHHHHhCCEEEeCchhhCCCCCCeE
Confidence            87764 44443 3334432010                         0  235667776 6676544433222  34689


Q ss_pred             EEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          475 RFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       475 R~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      |++++.   ++++|+++++.|.++.++
T Consensus       362 Ri~~~~---~~~~i~~~l~~l~~~~~~  385 (389)
T 1gd9_A          362 RISYAT---AYEKLEEAMDRMERVLKE  385 (389)
T ss_dssp             EEECCS---CHHHHHHHHHHHHHHHHH
T ss_pred             EEEecC---CHHHHHHHHHHHHHHHHh
Confidence            999863   677999999999988764

>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}

Probab=99.93  E-value=8.7e-26  Score=226.86  Aligned_cols=340  Identities=11%  Similarity=0.032  Sum_probs=222.4

Q ss_pred             CCCCCHHHHHHHHHHhhcC---CCCcc---cccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEE-cCCchHHHHHH
Q 037144           84 PATSSVAGIVGEMLSSGFN---VVGLD---WISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVI-QGTTCEALLCT  156 (502)
Q Consensus        84 ~~~~~~~~~~~~~l~~~~n---~~~~~---~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~-t~ggt~a~~~a  156 (502)
                      .+.+.++.++..+.....+   ++...   ...++.+.++-+++++.+++++|.++..      ..+| |+|||+++.++
T Consensus        20 t~~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~~~~~~------evif~t~~~T~a~n~a   93 (377)
T 3e77_A           20 FQSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVPDNY------KVIFLQGGGCGQFSAV   93 (377)
T ss_dssp             CSCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHTCCTTE------EEEEESSHHHHHHHHH
T ss_pred             ccCCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCC------eEEEEcCchHHHHHHH
Confidence            3445556655555443332   22221   2345677888889999999999997642      5788 68999998777


Q ss_pred             HHHHHHHHHHHhCccCCCCeEEEeCCCCchh--HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCcc
Q 037144          157 LTAARDRVLKKIGRENISKLVVYSSDQTHCA--FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIP  234 (502)
Q Consensus       157 l~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s--~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p  234 (502)
                      +......         .+++.+++...+|++  +.+.++..|.   .++.+|+++  ++..++++++.++++++      
T Consensus        94 ~~~l~~~---------~~Gd~v~~~~~g~~~~~~~~~a~~~G~---~~~~~~~~~--~~~~~~~~~~~~i~~~t------  153 (377)
T 3e77_A           94 PLNLIGL---------KAGRCADYVVTGAWSAKAAEEAKKFGT---INIVHPKLG--SYTKIPDPSTWNLNPDA------  153 (377)
T ss_dssp             HHHHGGG---------STTCEEEECCCSHHHHHHHHHHTTTSE---EEECSCCCS--SSCSCCCGGGCCCCTTC------
T ss_pred             HHhccCC---------CCCCeEEEEECCHHHHHHHHHHHHhCC---ceEEeccCC--CcCCCCChHHhccCCCc------
Confidence            6654321         024566666667765  3344555676   777778764  34667777766665444      


Q ss_pred             EEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEe
Q 037144          235 LFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWV  314 (502)
Q Consensus       235 ~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~  314 (502)
                      .+|++++.+|.+|.+.|+     +|+++|+++|||++++.+..+++-.        ..|.+++++|||+ +|.|.|++++
T Consensus       154 ~lV~~~h~et~tG~~~pi-----i~~~~~~~~~vD~~q~~g~~~id~~--------~~~~~~~s~~K~~-gp~G~g~l~~  219 (377)
T 3e77_A          154 SYVYYCANETVHGVEFDF-----IPDVKGAVLVCDMSSNFLSKPVDVS--------KFGVIFAGAQKNV-GSAGVTVVIV  219 (377)
T ss_dssp             SCEEEESEETTTTEECSS-----CCCCTTCCEEEECTTTTTSSCCCGG--------GCSEEEEEGGGTT-SCTTCEEEEE
T ss_pred             cEEEEeCccCchheEchh-----hhccCCCEEEEEcccccCCCCCchh--------hcCEEEEeccccc-CCCccEEEEE
Confidence            378899999999999999     4788999999999999888877532        3456899999999 5999999999


Q ss_pred             eCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCC-CCchHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHH
Q 037144          315 KDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRR-FRSLKLWVVIRNFGVA-NLRNFIRSHVGMAKLFERL  392 (502)
Q Consensus       315 r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~g~~-g~~~~~~~~~~la~~l~~~  392 (502)
                      |++.. ...-...+.|+......        .  .....++-. +....+..+++.+-.+ |++++.++..++++++++.
T Consensus       220 ~~~~l-~~~~~~~p~~~~~~~~~--------~--~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~  288 (377)
T 3e77_A          220 RDDLL-GFALRECPSVLEYKVQA--------G--NSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEI  288 (377)
T ss_dssp             ETTSC-SCCCTTSCGGGCHHHHH--------T--TTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHH-hhccCCCCchhhHHHHh--------h--cCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHH
Confidence            87642 11111112232100000        0  000000101 1224566777777677 8999999999999999999


Q ss_pred             HhcCCCeEEecC---CCee-EEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeE
Q 037144          393 VTSDKRFEVAFP---RNFS-LVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIV  468 (502)
Q Consensus       393 l~~~~~~~l~~~---~~~~-~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~  468 (502)
                      |+++||+++...   ..++ +++|.++....                     .   .++...+.+.+.+.|.+...+  .
T Consensus       289 L~~~~g~~~~~~~~~~rs~~ivsf~~~~~~~---------------------~---~~~~~~~l~~l~~~Gi~~~~g--~  342 (377)
T 3e77_A          289 IDNSQGFYVCPVEPQNRSKMNIPFRIGNAKG---------------------D---DALEKRFLDKALELNMLSLKG--H  342 (377)
T ss_dssp             HHTSTTSEECCSCGGGBCSSEEEEEESSTTC---------------------C---HHHHHHHHHHHHHTTEESCBC--C
T ss_pred             HHhcCCceecCCCHHHcCCcEEEEEcCCCCC---------------------c---hhHHHHHHHHHHHCCcEEeCC--C
Confidence            999999986431   2344 58998864210                     0   122235666666778643222  1


Q ss_pred             CCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          469 GGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       469 ~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      ...+.+|+|+.+ .++++|||+++++|+++.++
T Consensus       343 ~~~g~iRiS~~~-~~t~edId~l~~al~~~~~~  374 (377)
T 3e77_A          343 RSVGGIRASLYN-AVTIEDVQKLAAFMKKFLEM  374 (377)
T ss_dssp             TTTCSEEEECCT-TSCHHHHHHHHHHHHHHHHH
T ss_pred             CcCCEEEEECCC-CCCHHHHHHHHHHHHHHHHH
Confidence            223469999875 46777999999999998764

>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1

Probab=99.93  E-value=1e-24  Score=221.75  Aligned_cols=324  Identities=11%  Similarity=0.052  Sum_probs=224.1

Q ss_pred             HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144           90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG  169 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~  169 (502)
                      +..+.+.+...+......|...++..++++.+.+|+.+.+|++...     ...++|+||++++..++.+...       
T Consensus        56 ~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~-----~~v~~~~g~t~al~~~~~~l~~-------  123 (389)
T 1o4s_A           56 PEPVVEEAVRFLQKGEVKYTDPRGIYELREGIAKRIGERYKKDISP-----DQVVVTNGAKQALFNAFMALLD-------  123 (389)
T ss_dssp             CHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHHHHTCCCCG-----GGEEEESHHHHHHHHHHHHHCC-------
T ss_pred             CHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCH-----HHEEEecCHHHHHHHHHHHhCC-------
Confidence            3445666666664433456555677899999999999988874211     2689999999999888776532       


Q ss_pred             ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144          170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV  249 (502)
Q Consensus       170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i  249 (502)
                          +++.|+++..+|.++..+++..|+   +++.+|.++++++.+|+++|+++++++      +.+|+++.++|++|.+
T Consensus       124 ----~gd~Vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~nptG~~  190 (389)
T 1o4s_A          124 ----PGDEVIVFSPVWVSYIPQIILAGG---TVNVVETFMSKNFQPSLEEVEGLLVGK------TKAVLINSPNNPTGVV  190 (389)
T ss_dssp             ----TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECCGGGTTCCCHHHHHHTCCTT------EEEEEEESSCTTTCCC
T ss_pred             ----CCCEEEEcCCCchhHHHHHHHcCC---EEEEEecCCccCCCCCHHHHHHhcccC------ceEEEEcCCCCCCCCC
Confidence                567888899999999999999999   999999975334789999999988643      3467788899999999


Q ss_pred             CC---hhHHHHHHHHhCCEEEeecccccccccCc--cchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhh
Q 037144          250 DP---LKPLCDVAKQFGIWVHVDAAYAGSACICP--EFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLST  323 (502)
Q Consensus       250 dp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~--~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~  323 (502)
                      -|   +++|+++|++||+++++|++|+.+....+  .... +.+....|.++.++||+++.| ..+|++++++. .. +.
T Consensus       191 ~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~-~~~~~~~~i~~~s~sK~~~~~G~r~G~l~~~~~-~~-~~  267 (389)
T 1o4s_A          191 YRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILD-VSEGFDRIVYINGFSKSHSMTGWRVGYLISSEK-VA-TA  267 (389)
T ss_dssp             CCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHH-HCSSSTTEEEEEESTTTTTCGGGCCEEEECCHH-HH-HH
T ss_pred             CCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCHhh-cCCCCCcEEEEeechhhcCCcccceEEEEeCHH-HH-HH
Confidence            66   99999999999999999999987654211  1111 222246789999999999733 34788887533 22 22


Q ss_pred             hcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q 037144          324 LSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAF  403 (502)
Q Consensus       324 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~  403 (502)
                      +.....+...                       ....+..+++...+.. +++++.++..++++++.+.|+++ ++++..
T Consensus       268 l~~~~~~~~~-----------------------~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~  322 (389)
T 1o4s_A          268 VSKIQSHTTS-----------------------CINTVAQYAALKALEV-DNSYMVQTFKERKNFVVERLKKM-GVKFVE  322 (389)
T ss_dssp             HHHHHHHHTC-----------------------SCCHHHHHHHHHHTTC-CCHHHHHHHHHHHHHHHHHHHHT-TCCCCC
T ss_pred             HHHHhhhccc-----------------------CCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHhc-CCeeec
Confidence            2111000000                       0123444455555532 27788888999999999999988 787763


Q ss_pred             CCCeeEEE-EEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeECCEEEEEEEecCC
Q 037144          404 PRNFSLVC-FRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVGGIYVLRFAAGNS  481 (502)
Q Consensus       404 ~~~~~~v~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lR~~~~~~  481 (502)
                       +..+++. +.+. ..                             ..++.++|. +.|..+.++..+....++|+++++ 
T Consensus       323 -~~~~~~~~~~~~-~~-----------------------------~~~l~~~l~~~~gi~v~~g~~f~~~~~~Ris~~~-  370 (389)
T 1o4s_A          323 -PEGAFYLFFKVR-GD-----------------------------DVKFCERLLEEKKVALVPGSAFLKPGFVRLSFAT-  370 (389)
T ss_dssp             -CSBSSEEEEECS-SC-----------------------------HHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCS-
T ss_pred             -CCcceEEEEeCC-CC-----------------------------HHHHHHHHHHHCCEEEeCchhcCCCCeEEEEEeC-
Confidence             4444443 3442 11                             235666665 568655444333323589999873 


Q ss_pred             CCcHHHHHHHHHHHHHHHH
Q 037144          482 MTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       482 ~t~~~di~~~~~~l~~~~~  500 (502)
                        ++++|+++++.|.++.+
T Consensus       371 --~~~~l~~~l~~l~~~l~  387 (389)
T 1o4s_A          371 --SIERLTEALDRIEDFLN  387 (389)
T ss_dssp             --CHHHHHHHHHHHHHHHT
T ss_pred             --CHHHHHHHHHHHHHHHh
Confidence              67799999999988765

>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}

Probab=99.93  E-value=4.6e-24  Score=217.17  Aligned_cols=300  Identities=11%  Similarity=0.062  Sum_probs=211.2

Q ss_pred             HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH
Q 037144          115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI  194 (502)
Q Consensus       115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~  194 (502)
                      .....++.+++++++|.+.         .+++++||+++..++.+...           +++.|+++...|.++..+++.
T Consensus        87 ~~~~~~l~~~la~~~~~~~---------~i~~~sGt~a~~~~l~~~~~-----------~gd~v~~~~~~~~~~~~~~~~  146 (399)
T 3tqx_A           87 QTIHKELEKDISEFLGTDD---------TILYSSCFDANGGLFETLLG-----------PEDAIISDELNHASIIDGIRL  146 (399)
T ss_dssp             BHHHHHHHHHHHHHHTCSE---------EEEESCHHHHHHTTHHHHCC-----------TTCEEEEETTCCHHHHHHHHS
T ss_pred             chHHHHHHHHHHHHHCCCc---------EEEECchHHHHHHHHHHhcC-----------CCCEEEECCcccHHHHHHHHH
Confidence            3455567788888888763         46666778998877765432           677899999999999999999


Q ss_pred             cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccccc
Q 037144          195 VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAG  274 (502)
Q Consensus       195 ~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~  274 (502)
                      .|.   +++.+|.       +|+++|++++++....+..+.+|+++.++|++|.+.|+++|.++|++||+++|+|++|+.
T Consensus       147 ~g~---~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~  216 (399)
T 3tqx_A          147 CKA---QRYRYKN-------NAMGDLEAKLKEADEKGARFKLIATDGVFSMDGIIADLKSICDLADKYNALVMVDDSHAV  216 (399)
T ss_dssp             CCS---EEEEECT-------TCTTHHHHHHHHHHTTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTT
T ss_pred             cCC---ceeEeCC-------CCHHHHHHHHHhhhccCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccc
Confidence            999   8888875       477899999988665455677899999999999999999999999999999999999974


Q ss_pred             ccccCccchhh--hcC-CCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCccc
Q 037144          275 SACICPEFRHF--IDG-VECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQ  351 (502)
Q Consensus       275 ~~~~~~~~~~~--~~~-~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~  351 (502)
                      +++.. .....  ..+ ....|+++.++||+++++.+ |+++.+ +............|....                 
T Consensus       217 ~~~~~-~~~~~~~~~~~~~~~di~~~s~sK~~~g~~g-G~~~~~-~~~~~~~~~~~~~~~~~~-----------------  276 (399)
T 3tqx_A          217 GFIGE-NGRGTPEYCGVADRVDILTGTLGKALGGASG-GYTSGH-KEIIEWLRNRSRPYLFSN-----------------  276 (399)
T ss_dssp             TTSST-TSCCHHHHHTCTTCCSEEEEESSSSSCSSCC-EEEEEC-HHHHHHHHHHCHHHHSSC-----------------
T ss_pred             cccCC-CCCchHHhhCCCCCCcEEEecchHhcccCce-EEEEcC-HHHHHHHHHhCcceeccC-----------------
Confidence            43321 11111  112 24679999999999985544 666654 433322222122222110                 


Q ss_pred             ccCCCCCCch---HHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhccc
Q 037144          352 ITLCRRFRSL---KLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYK  428 (502)
Q Consensus       352 ~~~sr~~~al---~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~  428 (502)
                           ....+   .+..+++... ++..++.++..++++++.+.|+++ ++++. ++..+++++.+..            
T Consensus       277 -----~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~------------  336 (399)
T 3tqx_A          277 -----TVAPVIVATSLKVLELLK-TEGPQLRKQLQENSRYFRAGMEKL-GFQLV-PGNHPIIPVMLGD------------  336 (399)
T ss_dssp             -----CCCHHHHHHHHHHHHHHH-HTHHHHHHHHHHHHHHHHHHHHHH-TCCBC-CCSSSEEEEEEEC------------
T ss_pred             -----CCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHc-CCCcC-CCCCCEEEEEeCC------------
Confidence                 11222   3333343322 567889999999999999999988 78776 5667777777643            


Q ss_pred             CCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeE----CCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHhC
Q 037144          429 NGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIV----GGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEAF  502 (502)
Q Consensus       429 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~----~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~~  502 (502)
                                      .....++.++|.++|..+. +..+    .+..++|++++ ..+++++++++++.|+++.+++
T Consensus       337 ----------------~~~~~~~~~~l~~~gi~v~-~~~~~~~~~~~~~iRi~~~-~~~~~~~i~~~~~~l~~~~~~~  396 (399)
T 3tqx_A          337 ----------------AQLATNMADHLLQEGIYVV-GFSYPVVPMGKARIRVQMS-AVHTQQQLDRAIEAFGQVGKKL  396 (399)
T ss_dssp             ----------------HHHHHHHHHHHHHTTEECC-EECTTTSCTTCEEEEEECC-TTCCHHHHHHHHHHHHHHHHHT
T ss_pred             ----------------HHHHHHHHHHHHHCCCEEe-eeCCCCCCCCCceEEEEee-cCCCHHHHHHHHHHHHHHHHHh
Confidence                            1124567788888886543 3322    34579999986 4567789999999999987753

>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}

Probab=99.93  E-value=1.5e-24  Score=222.99  Aligned_cols=332  Identities=12%  Similarity=0.052  Sum_probs=224.3

Q ss_pred             HHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCc
Q 037144           91 GIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGR  170 (502)
Q Consensus        91 ~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~  170 (502)
                      ..+.+.+...+......|...+  .++++++++|+++.+|++...     ...++|+|+++|+..++.+++.        
T Consensus        77 ~~v~~a~~~~~~~~~~~y~~~~--~~l~~~l~~~l~~~~g~~~~~-----~~v~~~~g~~ea~~~a~~~~~~--------  141 (421)
T 3l8a_A           77 PEIKEAIINYGREHIFGYNYFN--DDLYQAVIDWERKEHDYAVVK-----EDILFIDGVVPAISIALQAFSE--------  141 (421)
T ss_dssp             HHHHHHHHHHHHHCCSSCBCCC--HHHHHHHHHHHHHHHCCCCCG-----GGEEEESCHHHHHHHHHHHHSC--------
T ss_pred             HHHHHHHHHHHhcCCcCCCCCC--HHHHHHHHHHHHHHhCCCCCH-----HHEEEcCCHHHHHHHHHHHhcC--------
Confidence            3455555555543333444333  788999999999999954221     2689999999999888887643        


Q ss_pred             cCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecC-CCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144          171 ENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTT-KSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV  249 (502)
Q Consensus       171 ~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~-~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i  249 (502)
                         +++.|++...+|.++..+++..|.   +++.+|++ .++++.+|+++|+++|++.     .+.+|+++.+++++|.+
T Consensus       142 ---~gd~Vi~~~~~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~d~~~le~~i~~~-----~~~~vil~~p~nptG~~  210 (421)
T 3l8a_A          142 ---KGDAVLINSPVYYPFARTIRLNDH---RLVENSLQIINGRFEIDFEQLEKDIIDN-----NVKIYLLCSPHNPGGRV  210 (421)
T ss_dssp             ---TEEEEEEEESCCHHHHHHHHHTTE---EEEEEECEEETTEEECCHHHHHHHHHHT-----TEEEEEEESSBTTTTBC
T ss_pred             ---CCCEEEECCCCcHHHHHHHHHCCC---EEEeccccccCCCeeeCHHHHHHHhhcc-----CCeEEEECCCCCCCCCc
Confidence               567888888999999999999999   99999986 3456789999999999742     13478888999999999


Q ss_pred             ---CChhHHHHHHHHhCCEEEeecccccccccCccchhhhc---CCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhh
Q 037144          250 ---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFID---GVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLS  322 (502)
Q Consensus       250 ---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~---~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~  322 (502)
                         +++++|+++|++||+++++|++|+++............   .....+.+..+++|+++ .+..+|+++++++.... 
T Consensus       211 ~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~~~l~~-  289 (421)
T 3l8a_A          211 WDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNESLRR-  289 (421)
T ss_dssp             CCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCSHHHHH-
T ss_pred             CCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCCHHHHH-
Confidence               78999999999999999999999876543211111111   11234477888999997 45677888887554432 


Q ss_pred             hhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144          323 TLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA  402 (502)
Q Consensus       323 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~  402 (502)
                      .+.......                   +..+.......++.++++. +.++++++.++..++++++.+.|++.|++++.
T Consensus       290 ~~~~~~~~~-------------------~~~~~n~~~~~a~~aal~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~~~  349 (421)
T 3l8a_A          290 KFQYRQLAN-------------------NQHEVPTVGMIATQAAFQY-GKPWLEELKTVIEGNIKLVIKELEAKTKIKVM  349 (421)
T ss_dssp             HHHHHHHHT-------------------TCSCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCSCEEE
T ss_pred             HHHHHHHhc-------------------ccCCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHhCCCceEe
Confidence            221110000                   0000111122233344443 56778899999999999999999887899987


Q ss_pred             cCCCeeEEE-EEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcEEEEeeeE--CCEEEEEEEe
Q 037144          403 FPRNFSLVC-FRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKVFMTHAIV--GGIYVLRFAA  478 (502)
Q Consensus       403 ~~~~~~~v~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~--~g~~~lR~~~  478 (502)
                      . +..+++. +.+...+.                           ...++.+.+.++ |..+.++..+  .+..++|+++
T Consensus       350 ~-~~~~~~~~v~~~~~~~---------------------------~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~  401 (421)
T 3l8a_A          350 E-PEGTYLVWLDFSAYAI---------------------------AQPQLSEKLQNEAKVVLNDGAHFGKEGKYFARLNV  401 (421)
T ss_dssp             C-CSBSSEEEEECGGGTC---------------------------CTTHHHHHHHHTTCEECEEGGGGCGGGTTEEEEEC
T ss_pred             C-CCeeEEEEEeccccCC---------------------------CHHHHHHHHHHhCCEEEECchhhCCCCCCEEEEEe
Confidence            4 4444444 44432110                           023566667644 6544333222  2357999998


Q ss_pred             cCCCCcHHHHHHHHHHHHHHHH
Q 037144          479 GNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       479 ~~~~t~~~di~~~~~~l~~~~~  500 (502)
                      +   +++++|+++++.|.++.+
T Consensus       402 ~---~~~~~i~~~l~~l~~~l~  420 (421)
T 3l8a_A          402 A---TPKNTVQEALSRIISVFG  420 (421)
T ss_dssp             C---SCHHHHHHHHHHHHHHC-
T ss_pred             c---CCHHHHHHHHHHHHHHHh
Confidence            6   478899999999988754

>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}

Probab=99.93  E-value=5.3e-25  Score=224.83  Aligned_cols=316  Identities=12%  Similarity=0.076  Sum_probs=215.0

Q ss_pred             ccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCch
Q 037144          107 DWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHC  186 (502)
Q Consensus       107 ~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~  186 (502)
                      .|...++..++++++.+++++.+|.+...    ....++|+||++|+..++.+...           +++.|+++..+|.
T Consensus        73 ~y~~~~g~~~l~~~l~~~l~~~~g~~~~~----~~~i~~~~g~~~a~~~~~~~l~~-----------~gd~vl~~~~~~~  137 (407)
T 3nra_A           73 AYTEYRGDLGIRDLLAPRLAAFTGAPVDA----RDGLIITPGTQGALFLAVAATVA-----------RGDKVAIVQPDYF  137 (407)
T ss_dssp             HSCCTTCCHHHHHHHHHHHHHHHTSCCCT----TTSEEEESHHHHHHHHHHHTTCC-----------TTCEEEEEESCCT
T ss_pred             CcCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCcEEEeCCcHHHHHHHHHHhCC-----------CCCEEEEcCCccc
Confidence            45555677889999999999999985210    01589999999999877765432           5778889999999


Q ss_pred             hHHHHHHHcCCCCCCEEEEecCC----CCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hhHHHHHH
Q 037144          187 AFQKAAQIVGIDRKNIRAIKTTK----SSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LKPLCDVA  259 (502)
Q Consensus       187 s~~~aa~~~Glg~~~v~~v~~~~----~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~eI~~i~  259 (502)
                      ++..+++..|.   +++.+|++.    ++++.+|+++|++++++.+      .+|+++.++|++|.+-|   +++|+++|
T Consensus       138 ~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~------~~v~~~~p~nptG~~~~~~~l~~i~~~~  208 (407)
T 3nra_A          138 ANRKLVEFFEG---EMVPVQLDYVSADETRAGLDLTGLEEAFKAGA------RVFLFSNPNNPAGVVYSAEEIGQIAALA  208 (407)
T ss_dssp             HHHHHHHHTTC---EEEEEEBCCCSSCCSSCCBCHHHHHHHHHTTC------CEEEEESSCTTTCCCCCHHHHHHHHHHH
T ss_pred             chHHHHHHcCC---EEEEeecccccccCcCCCcCHHHHHHHHhhCC------cEEEEcCCCCCCCcccCHHHHHHHHHHH
Confidence            99999999999   999999842    1357899999999997632      37788889999999988   99999999


Q ss_pred             HHhCCEEEeecccccccccCccchhhh--c-CCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcccccCcc
Q 037144          260 KQFGIWVHVDAAYAGSACICPEFRHFI--D-GVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEA  335 (502)
Q Consensus       260 ~~~g~~lhVDaA~g~~~~~~~~~~~~~--~-~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~  335 (502)
                      ++||+++++|++|+.+.+.........  . .....+.++.++||+++ .+..+|+++.+ +.... .+.....+...  
T Consensus       209 ~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~-~~~~~-~l~~~~~~~~~--  284 (407)
T 3nra_A          209 ARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGS-RAIIA-RMEKLQAIVSL--  284 (407)
T ss_dssp             HHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEEC-HHHHH-HHHHHHHHHTS--
T ss_pred             HHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcC-HHHHH-HHHHHHhhhcc--
Confidence            999999999999987654321111110  0 11244577889999997 44567877663 33322 22111000000  


Q ss_pred             CCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEE
Q 037144          336 TDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFR  413 (502)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~  413 (502)
                                           ....+..+++...+  +.+.+++..++..++++++.+.|+++|++++..+....++.+.
T Consensus       285 ---------------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~  343 (407)
T 3nra_A          285 ---------------------RAAGYSQAVLRGWFDEAPGWMEDRIARHQAIRDELLHVLRGCEGVFARTPQAGSYLFPR  343 (407)
T ss_dssp             ---------------------SSCHHHHGGGGGTTCCCTTHHHHHHHHHHHHHHHHHHHHHTSTTCBCCCCSBSSEECCB
T ss_pred             ---------------------CCChHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEEEEEe
Confidence                                 00122222222333  3456788888999999999999999988887644333444444


Q ss_pred             eecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcEEEEeeeEC--CEEEEEEEecCCCCcHHHHHH
Q 037144          414 VTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKVFMTHAIVG--GIYVLRFAAGNSMTMESHVRA  490 (502)
Q Consensus       414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~--g~~~lR~~~~~~~t~~~di~~  490 (502)
                      +.....                           ...++.+.|.++ |..+.++..+.  +..++|++++.   ++++|++
T Consensus       344 ~~~~~~---------------------------~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~---~~~~i~~  393 (407)
T 3nra_A          344 LPKLAV---------------------------APAEFVKILRLQAGVVVTPGTEFSPHTADSVRLNFSQ---DHEAAVA  393 (407)
T ss_dssp             CCCBSS---------------------------CHHHHHHHHHHHHCEECEEGGGTCTTCTTBEEEECCS---CHHHHHH
T ss_pred             CCCCCC---------------------------CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEeCC---CHHHHHH
Confidence            432110                           023556666543 76544333222  45789999863   7789999


Q ss_pred             HHHHHHHHHHh
Q 037144          491 AWTVVQEHLEA  501 (502)
Q Consensus       491 ~~~~l~~~~~~  501 (502)
                      +++.|.++.++
T Consensus       394 ~~~~l~~~~~~  404 (407)
T 3nra_A          394 AARRIVTLVER  404 (407)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99999988764

>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*

Probab=99.93  E-value=2.7e-24  Score=219.20  Aligned_cols=331  Identities=11%  Similarity=0.018  Sum_probs=221.9

Q ss_pred             HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144           90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG  169 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~  169 (502)
                      +..+.+.+...+......|...  ..++++.+.+|+.+.+|.+...     ...++|+||++|+..++.+...       
T Consensus        46 ~~~v~~a~~~~~~~~~~~y~~~--~~~l~~~la~~l~~~~g~~~~~-----~~v~~t~g~~~a~~~~~~~l~~-------  111 (399)
T 1c7n_A           46 PPELIEGLKKYLDETVLGYTGP--TEEYKKTVKKWMKDRHQWDIQT-----DWIINTAGVVPAVFNAVREFTK-------  111 (399)
T ss_dssp             CHHHHHHHHHHHHHCCCSSBCC--CHHHHHHHHHHHHHHHCCCCCG-----GGEEEESSHHHHHHHHHHHHCC-------
T ss_pred             CHHHHHHHHHHHhcCCCCCCCC--cHHHHHHHHHHHHHHhCCCCCh-----hhEEEcCCHHHHHHHHHHHhcC-------
Confidence            3445555555543333344433  7889999999999988853211     2689999999999887776532       


Q ss_pred             ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecC-CCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144          170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTT-KSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA  248 (502)
Q Consensus       170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~-~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~  248 (502)
                          +++.|+++..+|.++..+++..|.   +++.+|++ .++++.+|+++|+++|++.     .+.+|+++.++|++|.
T Consensus       112 ----~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~g~~~~d~~~l~~~l~~~-----~~~~v~~~~~~nptG~  179 (399)
T 1c7n_A          112 ----PGDGVIIITPVYYPFFMAIKNQER---KIIECELLEKDGYYTIDFQKLEKLSKDK-----NNKALLFCSPHNPVGR  179 (399)
T ss_dssp             ----TTCEEEECSSCCTHHHHHHHTTTC---EEEECCCEEETTEEECCHHHHHHHHTCT-----TEEEEEEESSBTTTTB
T ss_pred             ----CCCEEEEcCCCcHhHHHHHHHcCC---EEEecccccCCCCEEEcHHHHHHHhccC-----CCcEEEEcCCCCCCCc
Confidence                567888999999999999999998   99999885 3234679999999998621     1346777899999999


Q ss_pred             cCC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCC----CCCCeeEEccCCcCCCC-CcceEEEeeCchhh
Q 037144          249 VDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGV----ECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCL  320 (502)
Q Consensus       249 idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~----~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l  320 (502)
                      +-|   +++|+++|++||+++++|++|+.+......... +..+    ...+.++.++||+++.| ..+|+++++++...
T Consensus       180 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~  258 (399)
T 1c7n_A          180 VWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTV-FQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNPDIR  258 (399)
T ss_dssp             CCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCC-GGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHH
T ss_pred             CcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCccc-HHHcCccccCcEEEEEeChhhccccchheEEEEECCHHHH
Confidence            988   999999999999999999999876542211111 1111    13456778899999744 45788888765433


Q ss_pred             hhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhc-CC
Q 037144          321 LSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTS-DK  397 (502)
Q Consensus       321 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~-~~  397 (502)
                      .........+-.                      + ....+..+++...+  +.+.+++..++..++++++.+.|++ +|
T Consensus       259 ~~l~~~~~~~~~----------------------~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~  315 (399)
T 1c7n_A          259 ERFTKSRDATSG----------------------M-PFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVNHP  315 (399)
T ss_dssp             HHHHHHHHHTTC----------------------C-CCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred             HHHHHHHhhccc----------------------C-CCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence            221111100100                      0 01223333333332  4567888888999999999999998 88


Q ss_pred             CeEEecCCCeeEEE-EEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeEC--CEEE
Q 037144          398 RFEVAFPRNFSLVC-FRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVG--GIYV  473 (502)
Q Consensus       398 ~~~l~~~~~~~~v~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~  473 (502)
                      ++++. ++..+++. +.+...+.                           ...++.+.|. +.|..+.++..+.  +..+
T Consensus       316 ~~~~~-~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~  367 (399)
T 1c7n_A          316 EIKAP-LIEGTYLQWIDFRALKM---------------------------DHKAMEEFMIHKAQIFFDEGYIFGDGGIGF  367 (399)
T ss_dssp             TSBCC-CCSBSSEEEEECGGGCC---------------------------CHHHHHHHHHHTTCCCCEEGGGGCGGGTTE
T ss_pred             CCeEe-cCCceEEEEEEcccCCC---------------------------CHHHHHHHHHHhCCEEEeCccccCCCCCCe
Confidence            88776 45555554 45432100                           0235677776 5687554443332  3468


Q ss_pred             EEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          474 LRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       474 lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      +|++++.   .+++++++++.|.++.++
T Consensus       368 iRis~~~---~~~~l~~~l~~l~~~l~~  392 (399)
T 1c7n_A          368 ERINLAA---PSSVIQESLERLNKALKD  392 (399)
T ss_dssp             EEEECCS---CHHHHHHHHHHHHHHHHH
T ss_pred             EEEEecc---CHHHHHHHHHHHHHHHHH
Confidence            9999874   367999999999887654

>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}

Probab=99.92  E-value=2.7e-24  Score=217.99  Aligned_cols=326  Identities=9%  Similarity=0.028  Sum_probs=210.2

Q ss_pred             cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh--
Q 037144          110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA--  187 (502)
Q Consensus       110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s--  187 (502)
                      .++.+.++.+++++++++++|.+.        ..+||+|||+|+..++... .           +++.|+++...|++  
T Consensus        29 ~~~~~~~~~~~~~~~l~~~~~~~~--------~v~~~~sgt~a~~~~~~~~-~-----------~gd~vi~~~~~~~~~~   88 (379)
T 3ke3_A           29 MSKAFQEVMNDLLSNLKTVYNAEA--------AVIIPGSGTYGMEAVARQL-T-----------IDEDCLIIRNGWFSYR   88 (379)
T ss_dssp             TSHHHHHHHHHHHHHHHHHHTCSE--------EEEEESCHHHHHHHHHHHH-C-----------TTCEEEEEECSHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHhCCCC--------EEEEcCChhHHHHHHHHhC-C-----------CCCeEEEEeCCchhHH
Confidence            367777888899999999999873        5789999999987765322 1           46677777778766  


Q ss_pred             HHHHHHHcCCCCCCEEEEecCCCC------C-cccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hhHHHH
Q 037144          188 FQKAAQIVGIDRKNIRAIKTTKSS------S-YGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LKPLCD  257 (502)
Q Consensus       188 ~~~aa~~~Glg~~~v~~v~~~~~~------~-~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~eI~~  257 (502)
                      +...++..|++. +++.++.+..+      . +.+|+++|+++|++..     +.+|++++.+|++|.+.|   +++|++
T Consensus        89 ~~~~~~~~g~~~-~~~~~~~~~~g~~~~~~~~~~~d~~~l~~~i~~~~-----~~~v~~~~~~~~~G~~~~~~~l~~i~~  162 (379)
T 3ke3_A           89 WTQILEKGKFAK-SSTVLTAERTEDTEAPKPFAPVDIETAVAKIKEDK-----SAIVYAPHVETSSGIILSEEYIKALSE  162 (379)
T ss_dssp             HHHHHHHHCCSS-EEEEEECEESSCCSSCCCEECCCHHHHHHHHHHHT-----CSEEEEESEETTTTEECCHHHHHHHHH
T ss_pred             HHHHHHHhCCCC-ceEEEeccccccccccCCCCCCCHHHHHHHHhhcC-----CcEEEEEeecCCCceeCCHHHHHHHHH
Confidence            334556666522 56777764310      1 2689999999996431     237888999999999999   999999


Q ss_pred             HHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhc-CCcccccCccC
Q 037144          258 VAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLS-TNPQYLKNEAT  336 (502)
Q Consensus       258 i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~-~~~~yl~~~~~  336 (502)
                      +|++||+++|+|++++ +..+.+- ...     ++|++++++|||+++|.+.|++++++... ..... ...+|......
T Consensus       163 ~~~~~~~~li~D~~~~-g~~~~~~-~~~-----~~d~~~~s~~K~l~~~~g~g~~~~~~~~~-~~l~~~~~~~~~~~~~~  234 (379)
T 3ke3_A          163 AVHSVGGLLVIDCIAS-GCVWLDM-KEL-----GIDVLISAPQKGWSSTPCAGLVMLSAAAI-KKVESTESNCFSLDLKQ  234 (379)
T ss_dssp             HHHHTTCEEEEECTTC-TTCCCCH-HHH-----TCSEEEECTTTTTCSCCCEEEEEECHHHH-HHHHTCCCSCSTTCHHH
T ss_pred             HHHHcCCEEEEEeccc-CCccccc-ccc-----CCCEEEecchhhcCCCCceEEEEECHHHH-HhhhcCCCCceeecHHH
Confidence            9999999999999997 4433321 111     78999999999999999999998875532 21111 11122111000


Q ss_pred             CCCCcccccCCCcccccCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC--CeeEEEEE
Q 037144          337 DQEPKEQEVGYKDWQITLCRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR--NFSLVCFR  413 (502)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~--~~~~v~f~  413 (502)
                      -. ...+....+......+-. ....++.++++.+..+|++++.++..++++++++.|+++ |++++.++  .++++...
T Consensus       235 ~~-~~~~~~~~g~~~~~~t~~~~~~~a~~aal~~~~~~g~~~~~~~~~~l~~~l~~~l~~~-g~~~~~~~~~~~~~i~~~  312 (379)
T 3ke3_A          235 WL-TIMRAYENGGHAYHATMPTDSLRQFRDAILEAKEIGFDILRDAQWELGNRVRKVLTDK-GIESVAAEGFEAPGVVVS  312 (379)
T ss_dssp             HH-HHHHHHHTTSCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSBCTTCBCSSEEEE
T ss_pred             HH-HHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCEecCCccccCceEEEE
Confidence            00 000000000000000111 111244466666667788999999999999999999998 78886543  24444332


Q ss_pred             eecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeee-----ECCEEEEEEEecCCCCcHHHH
Q 037144          414 VTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAI-----VGGIYVLRFAAGNSMTMESHV  488 (502)
Q Consensus       414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-----~~g~~~lR~~~~~~~t~~~di  488 (502)
                      ..+.                           ...  .+.+.|.++|..+.++..     ..+..++|++++.+ ++++||
T Consensus       313 ~~~~---------------------------~~~--~~~~~L~~~Gi~v~~g~~~~~~~~~~~~~lRis~~~~-~t~~di  362 (379)
T 3ke3_A          313 YTER---------------------------DDM--HKGSAFAEAGLQIAAGVPLKVGEPDNFKTFRLGLFGL-DKLTDI  362 (379)
T ss_dssp             ECSC---------------------------HHH--HSSHHHHHTTCCCEECCCCSSCCCTTCCEEEEECCSH-HHHTCH
T ss_pred             ccCC---------------------------cch--HHHHHHHHCCeEEeCCccccccccCcCCEEEEeCCcC-CCHHHH
Confidence            2221                           011  124455667875333211     11256899998754 577799


Q ss_pred             HHHHHHHHHHHHh
Q 037144          489 RAAWTVVQEHLEA  501 (502)
Q Consensus       489 ~~~~~~l~~~~~~  501 (502)
                      ++++++|+++.++
T Consensus       363 ~~~~~~l~~~l~~  375 (379)
T 3ke3_A          363 DGTVERFEKALDE  375 (379)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999988764

>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0

Probab=99.92  E-value=2.9e-25  Score=222.30  Aligned_cols=339  Identities=11%  Similarity=0.018  Sum_probs=219.4

Q ss_pred             cccccCCCCCCHHHHHHHHHHhhcC----CCCccc---ccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEE-cCCc
Q 037144           78 NYFAYFPATSSVAGIVGEMLSSGFN----VVGLDW---ISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVI-QGTT  149 (502)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~l~~~~n----~~~~~~---~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~-t~gg  149 (502)
                      +.+.|.+++...|..+.+.+...+.    ++...+   ..++.+.++-.++++.+++++|.++..      ..+| |+||
T Consensus         5 ~~~~f~pgpt~~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~~~~~~------~v~f~t~~~   78 (361)
T 3m5u_A            5 RKINFSAGPSTLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYELNDDY------EVLFLQGGA   78 (361)
T ss_dssp             CCEECCSSSCCCCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHTCCTTE------EEEEESSHH
T ss_pred             ceEeecCCCCCCcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHhCCCCCc------eEEEEcCcH
Confidence            3455666666666556666555442    222222   225567788888999999999997532      5777 9999


Q ss_pred             hHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHh
Q 037144          150 CEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVE  229 (502)
Q Consensus       150 t~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~  229 (502)
                      |+++.+++.... .        +....+|+.+..+|. +.+.++..|+   +++.+++++++.+.++++. +  |++++ 
T Consensus        79 T~a~n~~~~~~~-~--------~~~~~~i~~~~~~~~-~~~~a~~~G~---~v~~~~~~~~g~~~~~~~~-~--l~~~t-  141 (361)
T 3m5u_A           79 SLQFAMIPMNLA-L--------NGVCEYANTGVWTKK-AIKEAQILGV---NVKTVASSEESNFDHIPRV-E--FSDNA-  141 (361)
T ss_dssp             HHHHHHHHHHHC-C--------SSCEEEEECSHHHHH-HHHHHHHTTC---CEEEEEECTTTTSCSCCCC-C--CCTTS-
T ss_pred             HHHHHHHHHhcC-C--------CCeEEEEeCCHHHHH-HHHHHHHcCC---ceEEEecccCcCCCcCChh-h--cCCCC-
Confidence            999977766442 1        112234555555564 4455566798   9999999874322256665 3  65443 


Q ss_pred             cCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcc
Q 037144          230 AELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDC  309 (502)
Q Consensus       230 ~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~  309 (502)
                           .+|.+++.+|.+|.+.|.     |++ +|+++|||++++.+..+++-        +.+|++++++|||++ |.|+
T Consensus       142 -----~lv~~~~~e~~tG~~~~~-----i~~-~~~~~~vD~~q~~g~~~id~--------~~~d~~~~s~~K~~g-p~G~  201 (361)
T 3m5u_A          142 -----DYAYICSNNTIYGTQYQN-----YPK-TKTPLIVDASSDFFSRKVDF--------SNIALFYGGVQKNAG-ISGL  201 (361)
T ss_dssp             -----SEEEEESEETTTTEECSS-----CCC-CSSCEEEECGGGTTSSCCCC--------TTEEEEEEETTTTSS-CTTC
T ss_pred             -----CEEEEeCCCCCcceeCCc-----ccc-cCCEEEEEcccccCCCCCCc--------ccCCEEEEechhccC-CCcc
Confidence                 378889999999998552     334 49999999999888877653        257899999999995 9999


Q ss_pred             eEEEeeCchhhhhhhc-CCcccccCccCCCCCcccccCCCcccccCCCC-CCchHHHHHHHHhcHH-HHHHHHHHHHHHH
Q 037144          310 CCLWVKDPSCLLSTLS-TNPQYLKNEATDQEPKEQEVGYKDWQITLCRR-FRSLKLWVVIRNFGVA-NLRNFIRSHVGMA  386 (502)
Q Consensus       310 g~~~~r~~~~l~~~~~-~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~g~~-g~~~~~~~~~~la  386 (502)
                      |+++++++.. ..... ..+.|+......      ....   .. ++-. .....+..+++.+-.+ |++++.++..+++
T Consensus       202 g~l~~~~~~~-~~~~~~~~p~~~~~~~~~------~~~~---~~-~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~  270 (361)
T 3m5u_A          202 SCIFIRKDML-ERSKNKQIPSMLNYLTHA------ENQS---LF-NTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKA  270 (361)
T ss_dssp             EEEEEEHHHH-HHHHTCCCCGGGCHHHHH------HTTT---CS-SCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred             EEEEEcHHHH-hhhcCCCCCceeehHHHh------hcCC---CC-CCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence            9999986643 21111 122332110000      0000   00 0101 1234566777777667 7999999999999


Q ss_pred             HHHHHHHhcCCCe-EEecCC--C-eeEEEEEeec-CcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcE
Q 037144          387 KLFERLVTSDKRF-EVAFPR--N-FSLVCFRVTP-SAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKV  461 (502)
Q Consensus       387 ~~l~~~l~~~~~~-~l~~~~--~-~~~v~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~  461 (502)
                      +++++.|++++++ ++..++  . ..+++|.++. ...                            ...+...|.++|..
T Consensus       271 ~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~~~~~----------------------------~~~~~~~L~~~gI~  322 (361)
T 3m5u_A          271 TMLYECIDLSNGFYKGHADKKDRSLMNVSFNIAKNKDL----------------------------EPLFVKEAEEAGMI  322 (361)
T ss_dssp             HHHHHHHHTSTTSEEESSCGGGBCSSEEEEEESSCTTH----------------------------HHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHCCCeeeccCCHHHcCCeEEEEECCCchhh----------------------------hHHHHHHHHHCCCE
Confidence            9999999999876 664332  2 3478898864 111                            12455667777864


Q ss_pred             EEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          462 FMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       462 ~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      ...+  ....+.+|+|++++ ++++|||+++++|+++.++
T Consensus       323 ~~~g--~~~~g~iRiS~~~~-~t~edId~l~~al~~~~~~  359 (361)
T 3m5u_A          323 GLKG--HRILGGIRASIYNA-LNLDQVKTLCEFMKEFQGK  359 (361)
T ss_dssp             CCBC--CTTTCSEEEECCTT-SCHHHHHHHHHHHHHHHHH
T ss_pred             EecC--CCccCeEEEEccCC-CCHHHHHHHHHHHHHHHHh
Confidence            3222  12224599999765 6777999999999998764

>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*

Probab=99.92  E-value=9.2e-24  Score=217.51  Aligned_cols=340  Identities=11%  Similarity=0.023  Sum_probs=223.1

Q ss_pred             HHHHHHHHHHhhcCCC-CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHH
Q 037144           89 VAGIVGEMLSSGFNVV-GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKK  167 (502)
Q Consensus        89 ~~~~~~~~l~~~~n~~-~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~  167 (502)
                      ++..+.+.+...+... ...|...++..++++.+.+++... |.+...     ...++|+|||+|+..++.+.++     
T Consensus        72 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~-~~~~~~-----~~v~~t~g~t~al~~~~~~l~~-----  140 (427)
T 3dyd_A           72 TDPEVTQAMKDALDSGKYNGYAPSIGFLSSREEIASYYHCP-EAPLEA-----KDVILTSGCSQAIDLCLAVLAN-----  140 (427)
T ss_dssp             CCHHHHHHHHHHHHHCCSSSCCCTTCCHHHHHHHHHHHCBT-TBCCCG-----GGEEEESSHHHHHHHHHHHHCC-----
T ss_pred             CCHHHHHHHHHHHhcCcCCCCCCCCCcHHHHHHHHHHHhhc-CCCCCh-----HHEEEecCcHHHHHHHHHHhcC-----
Confidence            3444555555544332 235655566777887776666544 432111     2689999999999888777643     


Q ss_pred             hCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccc
Q 037144          168 IGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAIT  247 (502)
Q Consensus       168 ~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G  247 (502)
                            +++.|+++..+|..+...++..|+   +++.+|.++.+++.+|+++|++++++.      +.+|+++.++|++|
T Consensus       141 ------~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~i~~p~nptG  205 (427)
T 3dyd_A          141 ------PGQNILVPRPGFSLYKTLAESMGI---EVKLYNLLPEKSWEIDLKQLEYLIDEK------TACLIVNNPSNPCG  205 (427)
T ss_dssp             ------TTCEEEEEESCCTHHHHHHHHTTC---EEEEEEEEGGGTTEECHHHHHSSCCTT------EEEEEEESSCTTTC
T ss_pred             ------CCCEEEEcCCCchhHHHHHHHcCC---EEEEEecccccCCCCCHHHHHHHhccC------CCEEEEECCCCCCC
Confidence                  567888999999999999999999   999999875446789999999988653      34788888999999


Q ss_pred             ccCC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCC-eeEEccCCcCCC-CCcceEEEeeCch----
Q 037144          248 AVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVD-SFSFNPHKWLFT-TLDCCCLWVKDPS----  318 (502)
Q Consensus       248 ~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aD-si~~~~hK~l~~-p~~~g~~~~r~~~----  318 (502)
                      .+-|   +++|+++|++||+++++|++|+++............--...+ .++.++||.++. ...+|+++++++.    
T Consensus       206 ~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~~~~vi~~~S~sK~~~~~G~riG~~~~~~~~~~~~  285 (427)
T 3dyd_A          206 SVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFG  285 (427)
T ss_dssp             CCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCSSCCEEEEEESTTTSSCGGGCCEEEEEECSTTSSH
T ss_pred             CCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhCCCCcEEEEeeccccCCCcCcceEEEEecCcchhhH
Confidence            9999   999999999999999999999876543221111110001223 345689998654 3557898887641    


Q ss_pred             -hhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 037144          319 -CLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK  397 (502)
Q Consensus       319 -~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~  397 (502)
                       .+.+.+........                     +........+..+++....+++.++.++..++++++.+.|+++|
T Consensus       286 ~~i~~~l~~~~~~~~---------------------~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~  344 (427)
T 3dyd_A          286 NEIRDGLVKLSQRIL---------------------GPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAAIP  344 (427)
T ss_dssp             HHHHHHHHHHHHHHC---------------------CSCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHST
T ss_pred             HHHHHHHHHHHhccC---------------------CCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence             11111110000000                     00011223334445444577888999999999999999999999


Q ss_pred             CeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeECCEEEEEE
Q 037144          398 RFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVGGIYVLRF  476 (502)
Q Consensus       398 ~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lR~  476 (502)
                      ++++..+....++.+.+......                   +    .....++.+++. +.|.++.++..+....++|+
T Consensus       345 g~~~~~p~~g~~~~~~l~~~~~~-------------------~----~~~~~~~~~~l~~~~gV~v~~g~~~~~~~~iRi  401 (427)
T 3dyd_A          345 GLRPVRPSGAMYLMVGIEMEHFP-------------------E----FENDVEFTERLVAEQSVHCLPATCFEYPNFIRV  401 (427)
T ss_dssp             TEEEECCSBTTEEEEEECGGGCT-------------------T----CSSHHHHHHHHHHHHCEECEEGGGGTCTTEEEE
T ss_pred             CceecCCCeeEEEEEecCHhhcC-------------------C----CCCHHHHHHHHHHHCCEEEECCcccCCCCeEEE
Confidence            99887544444444455321000                   0    000234555554 55765555444555679999


Q ss_pred             EecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          477 AAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       477 ~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      +++   +++++|+++++.|.++.++
T Consensus       402 s~~---~~~e~i~~~l~~l~~~l~~  423 (427)
T 3dyd_A          402 VIT---VPEVMMLEACSRIQEFCEQ  423 (427)
T ss_dssp             ESC---SCHHHHHHHHHHHHHHHHH
T ss_pred             EEC---CCHHHHHHHHHHHHHHHHH
Confidence            975   5778999999999988764

>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3

Probab=99.92  E-value=1.1e-23  Score=214.09  Aligned_cols=331  Identities=11%  Similarity=0.017  Sum_probs=220.7

Q ss_pred             HHHHHHHHHhhcCCCCcccccChhhHH-HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHh
Q 037144           90 AGIVGEMLSSGFNVVGLDWISSPAAVE-LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKI  168 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~-le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~  168 (502)
                      +..+.+.+...++.....|...  ..+ +++++.+|+.+.+|.+...     ...++|+|+++++..++.+...      
T Consensus        43 ~~~v~~a~~~~~~~~~~~y~~~--~~~~lr~~la~~l~~~~g~~~~~-----~~v~~t~g~~~al~~~~~~l~~------  109 (390)
T 1d2f_A           43 APCIIEALNQRLMHGVFGYSRW--KNDEFLAAIAHWFSTQHYTAIDS-----QTVVYGPSVIYMVSELIRQWSE------  109 (390)
T ss_dssp             CHHHHHHHHHHHTTCCCCCCCS--CCHHHHHHHHHHHHHHSCCCCCG-----GGEEEESCHHHHHHHHHHHSSC------
T ss_pred             CHHHHHHHHHHHhCCCCCCCCC--ChHHHHHHHHHHHHHhcCCCCCH-----HHEEEcCCHHHHHHHHHHHhcC------
Confidence            4456666666665433445443  567 8999999999988853221     2689999999999877776532      


Q ss_pred             CccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCC-CCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccc
Q 037144          169 GRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKS-SSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAIT  247 (502)
Q Consensus       169 ~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~-~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G  247 (502)
                           +++.|++...+|.++..+++..|.   +++.+|++++ +++.+|+++|++++++.     .+.+|+++.++|++|
T Consensus       110 -----~gd~vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~d~~~l~~~l~~~-----~~~~v~l~~p~nptG  176 (390)
T 1d2f_A          110 -----TGEGVVIHTPAYDAFYKAIEGNQR---TVMPVALEKQADGWFCDMGKLEAVLAKP-----ECKIMLLCSPQNPTG  176 (390)
T ss_dssp             -----TTCEEEEEESCCHHHHHHHHHTTC---EEEEEECEECSSSEECCHHHHHHHHTST-----TEEEEEEESSCTTTC
T ss_pred             -----CCCEEEEcCCCcHHHHHHHHHCCC---EEEEeecccCCCccccCHHHHHHHhccC-----CCeEEEEeCCCCCCC
Confidence                 567888888999999999999999   9999998753 24679999999998641     244777788999999


Q ss_pred             ccCC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCC-CC-CeeEEccCCcCCC-CCcceEEEeeCchhhh
Q 037144          248 AVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE-CV-DSFSFNPHKWLFT-TLDCCCLWVKDPSCLL  321 (502)
Q Consensus       248 ~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~-~a-Dsi~~~~hK~l~~-p~~~g~~~~r~~~~l~  321 (502)
                      .+-|   +++|+++|++||+++++|++|+.+......... +..+. .. |. ..++||+++. ...+|+++++++....
T Consensus       177 ~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~-~~~~~~~~~d~-~~s~sK~~~~~G~r~G~~~~~~~~~~~  254 (390)
T 1d2f_A          177 KVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIP-WSNVARGDWAL-LTSGSKSFNIPALTGAYGIIENSSSRD  254 (390)
T ss_dssp             CCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCC-GGGTCCSSEEE-EECSHHHHTCGGGCCEEEEECSHHHHH
T ss_pred             cCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcC-HHHcchhhHhh-ccCccHhhcccChhheEEEECCHHHHH
Confidence            9966   889999999999999999999876543211111 11111 22 55 8889999973 3457888886554332


Q ss_pred             hhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhc-CCC
Q 037144          322 STLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTS-DKR  398 (502)
Q Consensus       322 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~-~~~  398 (502)
                       .+......  ..                +..   ....+..+++...+  +.+.+++..++..++++++.+.|++ +|+
T Consensus       255 -~~~~~~~~--~~----------------~~~---~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~  312 (390)
T 1d2f_A          255 -AYLSALKG--RD----------------GLS---SPSVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPE  312 (390)
T ss_dssp             -HHHHHHHT--TS----------------CCC---SCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSS
T ss_pred             -HHHHHHhh--hc----------------ccC---CCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence             22110000  00                000   01223333333322  4567888888999999999999988 788


Q ss_pred             eEEecCCCeeEEE-EEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeEC--CEEEE
Q 037144          399 FEVAFPRNFSLVC-FRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVG--GIYVL  474 (502)
Q Consensus       399 ~~l~~~~~~~~v~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~l  474 (502)
                      +++. ++..+++. +.+...+.                         +  ..++.+.+. +.|..+.++..+.  +..++
T Consensus       313 ~~~~-~~~~~~~~~~~~~~~~~-------------------------~--~~~l~~~l~~~~gi~v~~g~~f~~~~~~~~  364 (390)
T 1d2f_A          313 LNWQ-IPQSTYLAWLDLRPLNI-------------------------D--DNALQKALIEQEKVAIMPGYTYGEEGRGFV  364 (390)
T ss_dssp             CCCC-CCSBCSEEEEECGGGCC-------------------------C--HHHHHHHHHHTTCEECEEGGGGCGGGTTEE
T ss_pred             CEEe-cCCccEEEEEEccccCC-------------------------C--HHHHHHHHHHHcCEEeeCccccCCCCCCeE
Confidence            8765 45555554 44432100                         0  245677777 4676544433332  34689


Q ss_pred             EEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          475 RFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       475 R~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      |++++.   ++++++++++.|.++.++
T Consensus       365 Ris~~~---~~~~l~~~l~~l~~~l~~  388 (390)
T 1d2f_A          365 RLNAGC---PRSKLEKGVAGLINAIRA  388 (390)
T ss_dssp             EEECCS---CHHHHHHHHHHHHHHHHH
T ss_pred             EEEecC---CHHHHHHHHHHHHHHHHh
Confidence            999874   467999999999988764

>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4

Probab=99.92  E-value=3.5e-23  Score=211.04  Aligned_cols=300  Identities=11%  Similarity=0.069  Sum_probs=201.9

Q ss_pred             HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144          116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV  195 (502)
Q Consensus       116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~  195 (502)
                      ....++.+.+++++|.+ .        .+++++||+++..++.+...           ++++|+++...|.++..+++..
T Consensus        90 ~~~~~l~~~la~~~g~~-~--------~i~~~sGs~a~~~~~~~~~~-----------~gd~v~~~~~~~~~~~~~~~~~  149 (401)
T 1fc4_A           90 DSHKELEQKLAAFLGME-D--------AILYSSCFDANGGLFETLLG-----------AEDAIISDALNHASIIDGVRLC  149 (401)
T ss_dssp             HHHHHHHHHHHHHHTCS-E--------EEEESCHHHHHHTTHHHHCC-----------TTCEEEEETTCCHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHhCCC-c--------EEEeCChHHHHHHHHHHHcC-----------CCCEEEEcchhHHHHHHHHHHc
Confidence            34455667777888876 2        46667778899877666532           5678889999999999999989


Q ss_pred             CCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccc-c
Q 037144          196 GIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYA-G  274 (502)
Q Consensus       196 Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g-~  274 (502)
                      |+   +++.+|.       +|+++|++++++....+.++.+|+++.++|++|.+.|+++|.++|++||+++++|++|+ +
T Consensus       150 g~---~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~De~~~~g  219 (401)
T 1fc4_A          150 KA---KRYRYAN-------NDMQELEARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVG  219 (401)
T ss_dssp             CS---EEEEECT-------TCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTEEEEEECTTTTT
T ss_pred             CC---ceEEECC-------CCHHHHHHHHHHhhccCCCceEEEEeCCcCCCCCCCCHHHHHHHHHHcCCEEEEECccccc
Confidence            98   8888762       48999999998654433346688889999999999999999999999999999999996 4


Q ss_pred             cccc-CccchhhhcCC-CCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccc
Q 037144          275 SACI-CPEFRHFIDGV-ECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQI  352 (502)
Q Consensus       275 ~~~~-~~~~~~~~~~~-~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~  352 (502)
                      .... ...... ..++ .+.|+++.++||+++.+.+ |+++.+ +............|....                  
T Consensus       220 ~~~~~g~~~~~-~~~~~~~~di~~~s~sK~~~~~~g-G~~~~~-~~~~~~l~~~~~~~~~~~------------------  278 (401)
T 1fc4_A          220 FVGENGRGSHE-YCDVMGRVDIITGTLGKALGGASG-GYTAAR-KEVVEWLRQRSRPYLFSN------------------  278 (401)
T ss_dssp             TSSTTSCCHHH-HTTCTTCCSEEEEESSSTTCSSSC-EEEEEC-HHHHHHHHHHCHHHHHSC------------------
T ss_pred             ccCCCCCccHH-HcCCCcCCcEEEecchhhccCCCC-EEEEcC-HHHHHHHHHhCcCceeCC------------------
Confidence            3321 111111 1122 2579999999999965655 777764 443322211111121100                  


Q ss_pred             cCCCCCCchHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCC
Q 037144          353 TLCRRFRSLKLWVVIRNFGV-ANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGT  431 (502)
Q Consensus       353 ~~sr~~~al~~~~~l~~~g~-~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~  431 (502)
                          ....+.+++++..+.. +..+++.++..++++++.+.|++. ++++. ++..+++++.+..               
T Consensus       279 ----~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~---------------  337 (401)
T 1fc4_A          279 ----SLAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQMSAA-GFTLA-GADHAIIPVMLGD---------------  337 (401)
T ss_dssp             ----CCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHT-TCCBC-CSSSSEEEEEEEC---------------
T ss_pred             ----CCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCccc-CCCCCEEEEEcCC---------------
Confidence                0122333333322211 114677888999999999999988 78776 5566777777642               


Q ss_pred             cccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeE---CCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          432 YDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIV---GGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       432 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~---~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                                   .....++.+.|.++|..+......   .+..++|++++ ..++++++++++++|+++.++
T Consensus       338 -------------~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~iRi~~~-~~~~~~~i~~~~~~l~~~~~~  396 (401)
T 1fc4_A          338 -------------AVVAQKFARELQKEGIYVTGFFYPVVPKGQARIRTQMS-AAHTPEQITRAVEAFTRIGKQ  396 (401)
T ss_dssp             -------------HHHHHHHHHHHHHTTEECCEECTTSSCTTCEEEEEECC-TTCCHHHHHHHHHHHHHHHHH
T ss_pred             -------------hHHHHHHHHHHHHCCcEEeeecCCCCCCCCceEEEEeC-CCCCHHHHHHHHHHHHHHHHH
Confidence                         112346777787788643332211   23578999986 445777999999999998765

>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*

Probab=99.92  E-value=6.3e-24  Score=219.19  Aligned_cols=323  Identities=11%  Similarity=0.051  Sum_probs=217.8

Q ss_pred             ccccChhhHHHHHHHHHHHHHhcCC----CCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCC
Q 037144          107 DWISSPAAVELENIVMDWLGQMLDL----PKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSD  182 (502)
Q Consensus       107 ~~~~~p~~~~le~~~~~~l~~l~g~----~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~  182 (502)
                      .|....+..++++++.+++.+..|.    +.+       .+++|+||++||..++.+.+.           +++.|+++.
T Consensus        81 ~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~-------~v~~~~gg~~a~~~~~~~l~~-----------~gd~vl~~~  142 (435)
T 3piu_A           81 LFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPN-------HLVLTAGATSANETFIFCLAD-----------PGEAVLIPT  142 (435)
T ss_dssp             HCCCTTCCHHHHHHHHHHHHHHTTTSSCCCGG-------GEEEEEHHHHHHHHHHHHHCC-----------TTCEEEEEE
T ss_pred             ccCCCCCcHHHHHHHHHHHHHhhCCCCCCCHH-------HEEEcCChHHHHHHHHHHhcC-----------CCCeEEECC
Confidence            3555556688999999999987662    332       689999999999888876643           567888899


Q ss_pred             CCchhHHHHHH-HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hhHHHHH
Q 037144          183 QTHCAFQKAAQ-IVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LKPLCDV  258 (502)
Q Consensus       183 ~~H~s~~~aa~-~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~eI~~i  258 (502)
                      ..|.++..++. ..|.   +++.+|+++++++.+|+++|+++|++..+.+..+.+|+++.++|++|.+-|   +++|+++
T Consensus       143 p~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~  219 (435)
T 3piu_A          143 PYYPGFDRDLKWRTGV---EIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSF  219 (435)
T ss_dssp             SCCTTHHHHTTTTTCC---EEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHH
T ss_pred             CccccHHHHHHHhcCC---EEEEeeCCCccCCcCCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHH
Confidence            99999988877 7888   999999986555789999999999886655556778889999999999844   6888899


Q ss_pred             HHHhCCEEEeecccccccccCccch---hhhcCC--------CCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhhhcC
Q 037144          259 AKQFGIWVHVDAAYAGSACICPEFR---HFIDGV--------ECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLST  326 (502)
Q Consensus       259 ~~~~g~~lhVDaA~g~~~~~~~~~~---~~~~~~--------~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~  326 (502)
                      |++||+++++|++|+++.+......   ......        .....+..++||+++ .+..+|+++.+++... ..+..
T Consensus       220 ~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g~~G~r~G~~~~~~~~~~-~~~~~  298 (435)
T 3piu_A          220 VEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVV-AAATK  298 (435)
T ss_dssp             HHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEEEEESSSSSCCGGGCEEEEEESCHHHH-HHHHH
T ss_pred             HHHcCCEEEEeccccccccCCCCCcCHHHhccccccccccCCCCCEEEEEeeecccCCCceeEEEEEeCCHHHH-HHHHH
Confidence            9999999999999987554322111   111100        112267789999997 4456788887655432 22211


Q ss_pred             CcccccCccCCCCCcccccCCCcccccCCCCCCchHHHH---HHHHhc--HHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 037144          327 NPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWV---VIRNFG--VANLRNFIRSHVGMAKLFERLVTSDKRFEV  401 (502)
Q Consensus       327 ~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~---~l~~~g--~~g~~~~~~~~~~la~~l~~~l~~~~~~~l  401 (502)
                      ...+..                      .   .++...+   .+....  .+.+.+..++..++++++.+.|++. ++++
T Consensus       299 ~~~~~~----------------------~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~  352 (435)
T 3piu_A          299 MSSFGL----------------------V---SSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKS-GISC  352 (435)
T ss_dssp             HGGGSC----------------------C---CHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-TCEE
T ss_pred             HhhcCC----------------------C---CHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcc
Confidence            111110                      0   1222222   222111  2345677788889999999999987 8888


Q ss_pred             ecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcEEEEeeeE--CCEEEEEEEe
Q 037144          402 AFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKVFMTHAIV--GGIYVLRFAA  478 (502)
Q Consensus       402 ~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~--~g~~~lR~~~  478 (502)
                      ..+....++.+.+.....                    .  .......++.+++.++ |..+.++..+  .+..++|+++
T Consensus       353 ~~~~~g~~~~~~l~~~~~--------------------~--~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~  410 (435)
T 3piu_A          353 LNGNAGLFCWVDMRHLLR--------------------S--NTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCF  410 (435)
T ss_dssp             CCCCSSSEEEEECGGGSS--------------------S--SSHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEEC
T ss_pred             cCCCeeEEEEEEcccccc--------------------c--CCchhHHHHHHHHHHHCCEEEeCCcccCCCCCCEEEEEe
Confidence            743333455555532100                    0  0011234677777776 7654433322  3457899998


Q ss_pred             cCCCCcHHHHHHHHHHHHHHHHh
Q 037144          479 GNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       479 ~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      +..  ++++|+++++.|.++.++
T Consensus       411 ~~~--~~e~i~~~l~~l~~~l~~  431 (435)
T 3piu_A          411 ANL--PERTLDLAMQRLKAFVGE  431 (435)
T ss_dssp             SSS--CHHHHHHHHHHHHHHHHH
T ss_pred             eCC--CHHHHHHHHHHHHHHHHH
Confidence            533  678999999999988764

>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1

Probab=99.92  E-value=3.6e-24  Score=217.38  Aligned_cols=329  Identities=11%  Similarity=0.045  Sum_probs=220.1

Q ss_pred             HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCC-cEEEcCCchHHHHHHHHHHHHHHHHHh
Q 037144           90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNG-GGVIQGTTCEALLCTLTAARDRVLKKI  168 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~-~g~~t~ggt~a~~~al~~a~~~~~~~~  168 (502)
                      +..+.+.+...++.....|...++..++++.+.+|+.+.+|.+...     . ..++|+||++++..++.+...      
T Consensus        45 ~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~-----~~~v~~~~g~~~a~~~~~~~~~~------  113 (386)
T 1u08_A           45 PRYLQERLAHHVAQGANQYAPMTGVQALREAIAQKTERLYGYQPDA-----DSDITVTAGATEALYAAITALVR------  113 (386)
T ss_dssp             CHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHSCCCCT-----TTTEEEESSHHHHHHHHHHHHCC------
T ss_pred             CHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHHHHHHHhCCCCCC-----CCCEEEcCChHHHHHHHHHHhCC------
Confidence            3456666665554333456555567899999999999998864221     2 589999999999887776532      


Q ss_pred             CccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144          169 GRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA  248 (502)
Q Consensus       169 ~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~  248 (502)
                           +++.|+++...|.++..+++..|.   +++.+|++.+ ++.+|+++|+++++++      +.+|+++.++|++|.
T Consensus       114 -----~gd~vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~~-~~~~d~~~l~~~l~~~------~~~v~l~~p~nptG~  178 (386)
T 1u08_A          114 -----NGDEVICFDPSYDSYAPAIALSGG---IVKRMALQPP-HFRVDWQEFAALLSER------TRLVILNTPHNPSAT  178 (386)
T ss_dssp             -----TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECCTT-TCCCCHHHHHHHCCTT------EEEEEEESSCTTTCC
T ss_pred             -----CCCEEEEeCCCchhHHHHHHHcCC---EEEEeecCcc-cCcCCHHHHHHhhccc------CEEEEEeCCCCCCCc
Confidence                 567888888999999999999999   9999999753 4789999999998532      447778889999999


Q ss_pred             cCC---hhHHHHHHHHhCCEEEeecccccccccCccchhh--hcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhh
Q 037144          249 VDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF--IDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLS  322 (502)
Q Consensus       249 idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~  322 (502)
                      +-|   +++|+++|++||+|+++|++|+.+.+........  +.+....|.++.++||+++.| ..+|++++++ ... +
T Consensus       179 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~-~~~-~  256 (386)
T 1u08_A          179 VWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPA-PIS-A  256 (386)
T ss_dssp             CCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECCH-HHH-H
T ss_pred             cCCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhhcCCcccceEEEEcCH-HHH-H
Confidence            865   7899999999999999999998754422111111  000126789999999999743 3478888753 322 2


Q ss_pred             hhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144          323 TLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA  402 (502)
Q Consensus       323 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~  402 (502)
                      .+.....+..                 ++  .+ ......+..+++. +.++++++.++..++++++.+.|++. ++++.
T Consensus       257 ~l~~~~~~~~-----------------~~--~~-~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~  314 (386)
T 1u08_A          257 EIRKVHQYLT-----------------FS--VN-TPAQLALADMLRA-EPEHYLALPDFYRQKRDILVNALNES-RLEIL  314 (386)
T ss_dssp             HHHHHHHHHT-----------------SS--CC-HHHHHHHHHHHHH-CTHHHHTHHHHHHHHHHHHHHHTTSS-SCEEC
T ss_pred             HHHHHHHhhc-----------------cC--CC-hHHHHHHHHHHhC-CcHHHHHHHHHHHHHHHHHHHHHHHC-CCeec
Confidence            2211100000                 00  00 0011222333433 35678888899999999999999987 88876


Q ss_pred             cCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeE----CCEEEEEEE
Q 037144          403 FPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIV----GGIYVLRFA  477 (502)
Q Consensus       403 ~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~----~g~~~lR~~  477 (502)
                      .+....++++.+.....                          ....++.+++. +.|..+.++..+    .+..++|++
T Consensus       315 ~~~~g~~~~~~~~~~~~--------------------------~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~iRis  368 (386)
T 1u08_A          315 PCEGTYFLLVDYSAVST--------------------------LDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLC  368 (386)
T ss_dssp             CCCBSSEEEEECTTTCC--------------------------SCHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEE
T ss_pred             CCCceEEEEEecCCCCC--------------------------CCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCEEEEE
Confidence            44333456665532100                          00235666665 457654443333    245789999


Q ss_pred             ecCCCCcHHHHHHHHHHHHH
Q 037144          478 AGNSMTMESHVRAAWTVVQE  497 (502)
Q Consensus       478 ~~~~~t~~~di~~~~~~l~~  497 (502)
                      ++   +++++|+++++.|++
T Consensus       369 ~~---~~~~~i~~~~~~l~~  385 (386)
T 1u08_A          369 FA---KKESTLLAAAERLRQ  385 (386)
T ss_dssp             CC---SCHHHHHHHHHHHTT
T ss_pred             Ec---CCHHHHHHHHHHHhh
Confidence            86   367899999998854

>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*

Probab=99.92  E-value=1.4e-23  Score=216.29  Aligned_cols=355  Identities=12%  Similarity=0.126  Sum_probs=222.5

Q ss_pred             CCcccccCCCCCCHHHHHHHHHHhhcC----CCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchH
Q 037144           76 SPNYFAYFPATSSVAGIVGEMLSSGFN----VVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCE  151 (502)
Q Consensus        76 ~p~~~~~~~~~~~~~~~~~~~l~~~~n----~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~  151 (502)
                      ...||++..+++.++.++ +.+...+.    .....|..++...++..++++++++++|.+.+       .+++|+|||+
T Consensus        18 ~~~~Ld~~~~~~~~~~v~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~-------~v~~~~g~t~   89 (432)
T 3a9z_A           18 RKVYMDYNATTPLEPEVI-QAVTEAMKEAWGNPSSSYVAGRKAKDIINTARASLAKMIGGKPQ-------DIIFTSGGTE   89 (432)
T ss_dssp             CCEECBTTTCCCCCHHHH-HHHHHHHHHCCSCTTCSSHHHHHHHHHHHHHHHHHHHHHTCCGG-------GEEEESCHHH
T ss_pred             CcEEeeCCccCCCCHHHH-HHHHHHHHHhcCCCccCcHHHHHHHHHHHHHHHHHHHHcCCCcC-------eEEEeCChHH
Confidence            345777765555555544 33333321    11223444556677888999999999998654       5899999999


Q ss_pred             HHHHHHHHHHHHHHH---HhCcc------CC-CCeEEEeCCCCchhHHHHHH----HcCCCCCCEEEEecCCCCCcccCH
Q 037144          152 ALLCTLTAARDRVLK---KIGRE------NI-SKLVVYSSDQTHCAFQKAAQ----IVGIDRKNIRAIKTTKSSSYGLSA  217 (502)
Q Consensus       152 a~~~al~~a~~~~~~---~~~~~------~~-~~~~v~~s~~~H~s~~~aa~----~~Glg~~~v~~v~~~~~~~~~~d~  217 (502)
                      |+..++.+....+..   +.|..      +. ....|+++...|.|+.++..    ..|.   +++.+|+++. ++.+|+
T Consensus        90 a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~---~v~~v~~~~~-~~~~d~  165 (432)
T 3a9z_A           90 SNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVA---EVTFVPVSKV-NGQVEV  165 (432)
T ss_dssp             HHHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSC---EEEEECCCTT-TSSCCH
T ss_pred             HHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCc---EEEEEecCcc-cCCcCH
Confidence            999888877532221   11100      00 12578889999999866543    3578   9999998752 468999


Q ss_pred             HHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhC----------CEEEeecccccccccCccchhhhc
Q 037144          218 ESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFG----------IWVHVDAAYAGSACICPEFRHFID  287 (502)
Q Consensus       218 ~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g----------~~lhVDaA~g~~~~~~~~~~~~~~  287 (502)
                      ++|+++|+++      +.+|+++.++|++|.+.|+++|.++|+++|          +|+|+|++|+.+....+ ....  
T Consensus       166 ~~l~~~i~~~------~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~~~~~-~~~~--  236 (432)
T 3a9z_A          166 EDILAAVRPT------TCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVD-VEDL--  236 (432)
T ss_dssp             HHHHHTCCTT------EEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTTSCCC-HHHH--
T ss_pred             HHHHHhccCC------ceEEEEECcccCcccccCHHHHHHHHHhcCcccccccCCceEEEEEchhhhCCcccC-hhhc--
Confidence            9999988643      458899999999999999999999999999          99999999976543322 1211  


Q ss_pred             CCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCccccc-CCCCC-CchHHHH
Q 037144          288 GVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQIT-LCRRF-RSLKLWV  365 (502)
Q Consensus       288 ~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~-~sr~~-~al~~~~  365 (502)
                         ++|++++++||+++ |. +|++++++.....   ...+.+......             .... ++... ....+..
T Consensus       237 ---~~d~~~~s~~K~~g-~~-~G~~~~~~~~~~~---~~~~~~~~~~~~-------------~~~~~~~~~~~~~~a~~a  295 (432)
T 3a9z_A          237 ---GVDFLTIVGHKFYG-PR-IGALYVRGVGKLT---PLYPMLFGGGQE-------------RNFRPGTENTPMIAGLGK  295 (432)
T ss_dssp             ---CCSEEEEEGGGTTC-CS-CEEEEETTBTTTB---CCCCSCCSSCGG-------------GGTSCSCCCHHHHHHHHH
T ss_pred             ---CCCEEEEehhHhcC-Cc-ceEEEEccccccC---CcCceeecCCcc-------------ccccCCCcCHHHHHHHHH
Confidence               68999999999875 66 9999987653111   111111111000             0000 11111 1123334


Q ss_pred             HHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe--cC----CCe-eEEEEEeecCcchhhhhhcccCCCccccccc
Q 037144          366 VIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA--FP----RNF-SLVCFRVTPSAVMDKLRTKYKNGTYDQYRQF  438 (502)
Q Consensus       366 ~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~--~~----~~~-~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~  438 (502)
                      +++.+ .++++++.++..++++++.+.|++++++++.  .+    ... ++++|.+.....                   
T Consensus       296 al~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------  355 (432)
T 3a9z_A          296 AADLV-SENCETYEAHMRDIRDYLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQL-------------------  355 (432)
T ss_dssp             HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHGGGEEESSCCTTCCBCTTEEEEEECSTTC-------------------
T ss_pred             HHHHH-HhhHHHHHHHHHHHHHHHHHHHHhccCCcEEEeCCCCcccCCCCEEEEEeCCCCC-------------------
Confidence            45443 4578889999999999999999886565443  22    122 367777754210                   


Q ss_pred             chhHhhHHHHHHHHHHHH----hcCcEEEEee------e--ECC------EEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144          439 SEEERTNEFNRELLESIN----VSGKVFMTHA------I--VGG------IYVLRFAAGNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       439 ~~~~~~~~~~~~l~~~l~----~~g~~~~~~~------~--~~g------~~~lR~~~~~~~t~~~di~~~~~~l~~~~~  500 (502)
                       +       ...+.+.+.    +.|..+....      .  ..|      ..++|+++. ..++++|++++++.|+++.+
T Consensus       356 -~-------~~~~~~~l~~i~~~~G~~~~~~~~~~~~~~l~~~g~~~~~~~~~iRis~~-~~~t~eei~~~~~~l~~~~~  426 (432)
T 3a9z_A          356 -R-------GYMVLAQCQTLLASVGASCHSDHEDRPSPVLLSCGIPVDVARNAVRLSVG-RSTTRAEVDLIVQDLKQAVN  426 (432)
T ss_dssp             -C-------HHHHHHHCSSEECBSSCGGGGGGTTSCCHHHHHTTCCHHHHTTEEEEECC-TTCCHHHHHHHHHHHHHHHH
T ss_pred             -c-------HHHHHHHhcCeEEeccccccCCCCCCccHHHHhcCCCccccCceEEEEcC-CCCCHHHHHHHHHHHHHHHH
Confidence             0       112222221    1111100000      0  001      258999986 55678899999999998765


Q ss_pred             h
Q 037144          501 A  501 (502)
Q Consensus       501 ~  501 (502)
                      +
T Consensus       427 ~  427 (432)
T 3a9z_A          427 Q  427 (432)
T ss_dssp             H
T ss_pred             H
Confidence            4

>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*

Probab=99.92  E-value=4.6e-23  Score=212.21  Aligned_cols=327  Identities=11%  Similarity=0.059  Sum_probs=218.1

Q ss_pred             ccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCch
Q 037144          107 DWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHC  186 (502)
Q Consensus       107 ~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~  186 (502)
                      .|....+..++++.+.+++.+.+|.+...   .....++|+|+++++..++.+.++           +++.|+++..+|.
T Consensus        78 ~Y~~~~g~~~lr~~la~~~~~~~g~~~~~---~~~~i~~~~G~~~ai~~~~~~~~~-----------~gd~Vl~~~p~y~  143 (428)
T 1iay_A           78 NFQDYHGLPEFRKAIAKFMEKTRGGRVRF---DPERVVMAGGATGANETIIFCLAD-----------PGDAFLVPSPYYP  143 (428)
T ss_dssp             HCCCTTCCHHHHHHHHHHHHHHTTTCSCC---CTTSCEEEEHHHHHHHHHHHHHCC-----------TTCEEEEESSCCT
T ss_pred             CCCCCCCcHHHHHHHHHHHHHhcCCCCCC---ChhhEEEccChHHHHHHHHHHhCC-----------CCCeEEEccCCCc
Confidence            34433357889999999999988843100   002579999999999887776643           5678888889999


Q ss_pred             hHHHHH-HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hhHHHHHHHHh
Q 037144          187 AFQKAA-QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LKPLCDVAKQF  262 (502)
Q Consensus       187 s~~~aa-~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~eI~~i~~~~  262 (502)
                      ++...+ ...|+   +++.+|.+.++++.+|+++|++++++....+..+.+|+++.++|++|.+.|   +++|+++|++|
T Consensus       144 ~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~  220 (428)
T 1iay_A          144 AFNRDLRWRTGV---QLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQH  220 (428)
T ss_dssp             THHHHTTTTTCC---EEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTT
T ss_pred             chHHHHHHhcCC---EEEEeecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHC
Confidence            887754 46788   999999875445789999999999875444445667888899999999999   99999999999


Q ss_pred             CCEEEeecccccccccCcc---chhhhcC----CCCCC--eeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCccccc
Q 037144          263 GIWVHVDAAYAGSACICPE---FRHFIDG----VECVD--SFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQYLK  332 (502)
Q Consensus       263 g~~lhVDaA~g~~~~~~~~---~~~~~~~----~~~aD--si~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~  332 (502)
                      |+++++|++|+++.+....   .......    .-..|  .+..++||+++.| ..+|+++..++.... .+.....+. 
T Consensus       221 ~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~Glr~G~~~~~~~~~~~-~~~~~~~~~-  298 (428)
T 1iay_A          221 NIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFNDDVVN-CARKMSSFG-  298 (428)
T ss_dssp             TCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGGGCEEEEEESCHHHHH-HHHHHHTTS-
T ss_pred             CeEEEEeccccccccCCCCccCHHHhccccccccCCCCcEEEEecchhhcCCCCceEEEEEeCCHHHHH-HHHHHHhcc-
Confidence            9999999999875442211   1111110    00267  6788999999744 457888875554332 221100000 


Q ss_pred             CccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc-----HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCe
Q 037144          333 NEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG-----VANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNF  407 (502)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-----~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~  407 (502)
                                        +      ...+...++...+.     .+.+++..++..++++++.+.|+++ ++++..+...
T Consensus       299 ------------------~------~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g  353 (428)
T 1iay_A          299 ------------------L------VSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVV-GIKCLKNNAG  353 (428)
T ss_dssp             ------------------C------CCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCBCCCSSS
T ss_pred             ------------------c------CCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcccCCCee
Confidence                              0      02233333333332     2356778888899999999999988 7876533244


Q ss_pred             eEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcEEEEeeeEC--CEEEEEEEecCCCCc
Q 037144          408 SLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKVFMTHAIVG--GIYVLRFAAGNSMTM  484 (502)
Q Consensus       408 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~--g~~~lR~~~~~~~t~  484 (502)
                      +++++.+.....                   ..   ......++.++|.++ |..+..+..+.  +..++|++++ . .+
T Consensus       354 ~~~~~~~~~~~~-------------------~~---~~~~~~~l~~~l~~~~gi~v~~~~~~~~~~~~~iRis~~-~-~~  409 (428)
T 1iay_A          354 LFCWMDLRPLLR-------------------ES---TFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFA-N-MD  409 (428)
T ss_dssp             SEEEEECGGGCS-------------------SS---SHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECS-S-SC
T ss_pred             EEEEEechhhcC-------------------CC---chhHHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEe-c-CC
Confidence            456666542100                   00   011234677888776 76544433332  2468999986 3 57


Q ss_pred             HHHHHHHHHHHHHHHHh
Q 037144          485 ESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       485 ~~di~~~~~~l~~~~~~  501 (502)
                      ++++++++++|+++.++
T Consensus       410 ~e~i~~~~~~l~~~l~~  426 (428)
T 1iay_A          410 DGTVDIALARIRRFVGV  426 (428)
T ss_dssp             HHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHhc
Confidence            78999999999988764

>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}

Probab=99.92  E-value=1.8e-23  Score=213.57  Aligned_cols=334  Identities=12%  Similarity=0.096  Sum_probs=219.1

Q ss_pred             HHHHHHHHHHhhcCCC---CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHH
Q 037144           89 VAGIVGEMLSSGFNVV---GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVL  165 (502)
Q Consensus        89 ~~~~~~~~l~~~~n~~---~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~  165 (502)
                      ++..+.+.+...+...   .. |...++..++++.+.+|+.+.+|.+...     ...++|+|||+|+..++.+++.   
T Consensus        50 ~~~~v~~a~~~~~~~~~~~~~-y~~~~~~~~l~~~la~~~~~~~g~~~~~-----~~v~~t~g~t~a~~~~~~~~~~---  120 (407)
T 2zc0_A           50 PRAVLGEIAKEVLEKEPKSVM-YTPANGIPELREELAAFLKKYDHLEVSP-----ENIVITIGGTGALDLLGRVLID---  120 (407)
T ss_dssp             CHHHHHHHHHHHHHHCGGGGS-CCCTTCCHHHHHHHHHHHHHHSCCCCCG-----GGEEEESHHHHHHHHHHHHHCC---
T ss_pred             CHHHHHHHHHHHHhhcccccc-CCCCCCCHHHHHHHHHHHHHhcCCCCCc-----ceEEEecCHHHHHHHHHHHhcC---
Confidence            3445555555544322   23 5555567899999999999988853221     2689999999999888877643   


Q ss_pred             HHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEE-EEecCCc
Q 037144          166 KKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFL-CATVGTT  244 (502)
Q Consensus       166 ~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~V-v~t~gtt  244 (502)
                              +++.|+++..+|.++..+++..|+   +++.+|+++  + .+|+++|++++++....+..+.+| +.+.++|
T Consensus       121 --------~gd~vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~--~-~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~n  186 (407)
T 2zc0_A          121 --------PGDVVITENPSYINTLLAFEQLGA---KIEGVPVDN--D-GMRVDLLEEKIKELKAKGQKVKLIYTIPTGQN  186 (407)
T ss_dssp             --------TTCEEEEEESCCHHHHHHHHTTTC---EEEEEEEET--T-EECHHHHHHHHHHHHHTTCCEEEEEECCSSCT
T ss_pred             --------CCCEEEEeCCChHHHHHHHHHcCC---EEEEcccCC--C-CCCHHHHHHHHHhhhcccCCceEEEECCCCCC
Confidence                    567788888999999999999999   999999875  2 399999999997432222234455 5677899


Q ss_pred             cccccCChh---HHHHHHHHhCCEEEeecccccccccCccchhhhcCC--CCCCeeEEccCCcCCCCCcceEEEeeCchh
Q 037144          245 AITAVDPLK---PLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGV--ECVDSFSFNPHKWLFTTLDCCCLWVKDPSC  319 (502)
Q Consensus       245 ~~G~idpl~---eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~--~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~  319 (502)
                      ++|.+.|++   +|+++|++||+++|+|++|+.+.+....... +..+  .+.+.+..++||+++....+|+++++ +..
T Consensus       187 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~-~~~  264 (407)
T 2zc0_A          187 PMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVP-LKALDNEGRVIVAGTLSKVLGTGFRIGWIIAE-GEI  264 (407)
T ss_dssp             TTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCC-GGGGCSSCCEEEEEESTTTTCTTSCCEEEECC-HHH
T ss_pred             CCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCC-hhhcCCCCCEEEEcccccccCCCcceEEEecC-HHH
Confidence            999998887   9999999999999999999886542211111 1111  12335677899999833458888875 333


Q ss_pred             hhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--c--H-HHHHHHHHHHHHHHHHHHHHHh
Q 037144          320 LLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--G--V-ANLRNFIRSHVGMAKLFERLVT  394 (502)
Q Consensus       320 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g--~-~g~~~~~~~~~~la~~l~~~l~  394 (502)
                      . +.+.......                   +.    ....+..+++...+  +  . +.++++.++..++++++.+.|+
T Consensus       265 ~-~~~~~~~~~~-------------------~~----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~  320 (407)
T 2zc0_A          265 L-KKVLMQKQPI-------------------DF----CAPAISQYIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKALE  320 (407)
T ss_dssp             H-HHHHHHHTTT-------------------TS----SSCHHHHHHHHHHHHTTHHHHHTTTTHHHHHHHHHHHHHHHHH
T ss_pred             H-HHHHHHHHhh-------------------cC----CCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            2 2221100000                   00    01222223332222  2  2 4566777888899999999998


Q ss_pred             c-CCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcEEEEeeeEC---
Q 037144          395 S-DKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKVFMTHAIVG---  469 (502)
Q Consensus       395 ~-~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~---  469 (502)
                      + .|++++..+....++++.++.. .                         +  ..++.+.|.++ |..+.++..+.   
T Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~~~-~-------------------------~--~~~l~~~l~~~~gi~v~~g~~~~~~~  372 (407)
T 2zc0_A          321 NHLPNAEFTKPIAGMFVMFFLPEG-A-------------------------D--GISFANELMEREGVVVVPGKPFYTDE  372 (407)
T ss_dssp             HHCTTSCBCCCSBSSEEEEECSTT-C-------------------------C--HHHHHHHHHHHTCEECBCSGGGCSSS
T ss_pred             HhCCCCEEecCCCcEEEEEEcCCC-C-------------------------C--HHHHHHHHHHhCCeEEECchhccCCC
Confidence            7 5777765444444566665321 1                         0  24567777777 76443332221   


Q ss_pred             -CEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          470 -GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       470 -g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                       +..++|++++..  ++++|+++++.|.++.++
T Consensus       373 ~~~~~iRis~~~~--~~~~i~~~~~~l~~~l~~  403 (407)
T 2zc0_A          373 SGKNAIRLNFSRP--SKEEIPIGIKKLAKLYKE  403 (407)
T ss_dssp             CCTTEEEEECSSS--CTTHHHHHHHHHHHHHHH
T ss_pred             CCCCeEEEEeCCC--CHHHHHHHHHHHHHHHHH
Confidence             346899998754  566999999999987754

>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}

Probab=99.92  E-value=1.4e-23  Score=213.97  Aligned_cols=300  Identities=11%  Similarity=0.035  Sum_probs=208.5

Q ss_pred             hhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHH
Q 037144          113 AAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAA  192 (502)
Q Consensus       113 ~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa  192 (502)
                      +..++.+++.+++++++|.+         ..++|+|||+|+..++.+...           +++.|+++...|.++..++
T Consensus        85 g~~~~~~~l~~~la~~~g~~---------~v~~~~ggt~a~~~~~~~~~~-----------~gd~V~~~~p~~~~~~~~~  144 (398)
T 3a2b_A           85 GTLDIHVELEEKLSAYVGKE---------AAILFSTGFQSNLGPLSCLMG-----------RNDYILLDERDHASIIDGS  144 (398)
T ss_dssp             CCCHHHHHHHHHHHHHHTCS---------EEEEESSHHHHHHHHHHHSSC-----------TTCEEEEETTCCHHHHHHH
T ss_pred             CCcHHHHHHHHHHHHHhCCC---------cEEEECCHHHHHHHHHHHHhC-----------CCCEEEECCccCHHHHHHH
Confidence            44567788999999999864         479999999999888776643           6778999999999999999


Q ss_pred             HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccc
Q 037144          193 QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAY  272 (502)
Q Consensus       193 ~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~  272 (502)
                      +..|.   +++.+|+       +|+++|++++++...  ..+.+|+++.++|++|.+.|+++|.++|++||+++++|++|
T Consensus       145 ~~~g~---~~~~v~~-------~d~~~l~~~l~~~~~--~~~~~v~~~~~~nptG~~~~~~~l~~~~~~~~~~li~De~~  212 (398)
T 3a2b_A          145 RLSFS---KVIKYGH-------NNMEDLRAKLSRLPE--DSAKLICTDGIFSMEGDIVNLPELTSIANEFDAAVMVDDAH  212 (398)
T ss_dssp             HHSSS---EEEEECT-------TCHHHHHHHHHTSCS--SSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTT
T ss_pred             HHcCC---ceEEeCC-------CCHHHHHHHHHhhcc--CCceEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCC
Confidence            99999   8888875       589999999975321  13557888889999999999999999999999999999999


Q ss_pred             ccccccCccchhh--hcCC-CCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCc
Q 037144          273 AGSACICPEFRHF--IDGV-ECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKD  349 (502)
Q Consensus       273 g~~~~~~~~~~~~--~~~~-~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~  349 (502)
                      +.+.+. ......  ..++ +++|+++.++||+++ |.| |+++.+ +............+....               
T Consensus       213 ~~~~~~-~~~~~~~~~~~~~~~~di~~~s~sK~~~-~~G-G~~~~~-~~~~~~l~~~~~~~~~~~---------------  273 (398)
T 3a2b_A          213 SLGVIG-HKGAGTASHFGLNDDVDLIMGTFSKSLA-SLG-GFVAGD-ADVIDFLKHNARSVMFSA---------------  273 (398)
T ss_dssp             TTTTSS-GGGCCHHHHHTCGGGCSEEEEESSSTTC-SSC-EEEEEC-HHHHHHHHHHCHHHHSSB---------------
T ss_pred             cccccC-CCCCchHhhcCCCcCCeEEEeccccccc-CCC-cEEEeC-HHHHHHHHHhcccceecC---------------
Confidence            765431 111111  1122 247999999999998 545 777764 333222111111121110               


Q ss_pred             ccccCCCCCCch-HHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhccc
Q 037144          350 WQITLCRRFRSL-KLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYK  428 (502)
Q Consensus       350 ~~~~~sr~~~al-~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~  428 (502)
                           +...... .+..+++.+  +.++++.++..++++++.+.|+++ ++++. ++..+++++.++.            
T Consensus       274 -----~~~~~~~a~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~g~~~~~~~~~------------  332 (398)
T 3a2b_A          274 -----SMTPASVASTLKALEII--QNEPEHIEKLWKNTDYAKAQLLDH-GFDLG-ATESPILPIFIRS------------  332 (398)
T ss_dssp             -----CCCHHHHHHHHHHHHHH--HHCTHHHHHHHHHHHHHHHHHHHT-TCCBC-SCCSSEEEEECCC------------
T ss_pred             -----CCCHHHHHHHHHHHHHH--hhCHHHHHHHHHHHHHHHHHHHhc-CCCcC-CCCCCEEEEEcCC------------
Confidence                 0000111 223444442  335678888999999999999988 78776 4555666666532            


Q ss_pred             CCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC---CEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          429 NGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG---GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       429 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~---g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                                      .....++.++|.++|..+.++..+.   +..++|++++. .++++++++++++|+++.++
T Consensus       333 ----------------~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~iRis~~~-~~~~e~i~~~~~~l~~~l~~  391 (398)
T 3a2b_A          333 ----------------NEKTFWVTKMLQDDGVFVNPVVSPAVPAEESLIRFSLMA-THTYDQIDEAIEKMVKVFKQ  391 (398)
T ss_dssp             ----------------HHHHHHHHHHHHHTTEECEEECTTTSCGGGCEEEEECCT-TCCHHHHHHHHHHHHHHHHH
T ss_pred             ----------------HHHHHHHHHHHHHCCcEEEeeCCCCCCCCCceEEEEEeC-CCCHHHHHHHHHHHHHHHHH
Confidence                            1124567788888886544332221   35789999864 35677999999999998765

>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}

Probab=99.92  E-value=1.4e-23  Score=216.59  Aligned_cols=346  Identities=10%  Similarity=0.011  Sum_probs=221.5

Q ss_pred             HHHHHHHHhhcCCCC-cccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHH--HHHHHH
Q 037144           91 GIVGEMLSSGFNVVG-LDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAAR--DRVLKK  167 (502)
Q Consensus        91 ~~~~~~l~~~~n~~~-~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~--~~~~~~  167 (502)
                      ..+.+.+...+.... ..|....+..++++.+.+++.+.+|.+...     ...++|+|||+++..++.+..  .     
T Consensus        60 ~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~-----~~i~~t~g~t~al~~~~~~l~~~~-----  129 (437)
T 3g0t_A           60 QIGIETEIQKLREGVASIYPNLDGLPELKQEASRFAKLFVNIDIPA-----RACVPTVGSMQGCFVSFLVANRTH-----  129 (437)
T ss_dssp             HHHHHHHHHHHHHTGGGSCCCTTCCHHHHHHHHHHHHHHHCCCCCG-----GGEEEESHHHHHHHHHHHHHTTSC-----
T ss_pred             HHHHHHHHHHHhCCcCcCCCCCCChHHHHHHHHHHHHHhhCCCCCc-----ccEEEeCCHHHHHHHHHHHHhcCC-----
Confidence            344455544443222 445555556889999999999988875321     268999999999988877664  3     


Q ss_pred             hCccCCCCe--EEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcc
Q 037144          168 IGRENISKL--VVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTA  245 (502)
Q Consensus       168 ~~~~~~~~~--~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~  245 (502)
                            +++  .|+++..+|.++..+++..|+   +++.+|+++ +++.+|+++|+++++..     .+.+|+++.++|+
T Consensus       130 ------~gd~~~Vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~-~~~~~d~~~l~~~l~~~-----~~~~v~l~~p~np  194 (437)
T 3g0t_A          130 ------KNREYGTLFIDPGFNLNKLQCRILGQ---KFESFDLFE-YRGEKLREKLESYLQTG-----QFCSIIYSNPNNP  194 (437)
T ss_dssp             ------TTCSCCEEEEESCCHHHHHHHHHHTC---CCEEEEGGG-GCTTHHHHHHHHHHTTT-----CCCEEEEESSCTT
T ss_pred             ------CCCccEEEEeCCCcHhHHHHHHHcCC---EEEEEeecC-CCCccCHHHHHHHHhcC-----CceEEEEeCCCCC
Confidence                  456  788888999999999999999   999999974 34689999999999321     1337778889999


Q ss_pred             ccccCC---hhHHHHHHHHhCCEEEeecccccccccCccch-------hhhcCCCCCCeeEEccCCcCC-CCCcceEEEe
Q 037144          246 ITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFR-------HFIDGVECVDSFSFNPHKWLF-TTLDCCCLWV  314 (502)
Q Consensus       246 ~G~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~-------~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~  314 (502)
                      +|.+-|   +++|+++|++||+++++|++|+.+.+......       ..+.+....+.++.++||+++ .+..+|++++
T Consensus       195 tG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~  274 (437)
T 3g0t_A          195 TWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAGQRIGVLMI  274 (437)
T ss_dssp             TCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGGGCCEEEEE
T ss_pred             CCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEEEcCccCCCCccceeEEEEE
Confidence            999976   77789999999999999999986544210000       111222356688889999997 4456788877


Q ss_pred             eCchhhhhhhc-CCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHH--H---HHHHHHHHHHHHHH
Q 037144          315 KDPSCLLSTLS-TNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVA--N---LRNFIRSHVGMAKL  388 (502)
Q Consensus       315 r~~~~l~~~~~-~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~--g---~~~~~~~~~~la~~  388 (502)
                      ++ ......+. ....+.......     ...  .......+-....+..+++...+...  +   +.++.++..+++++
T Consensus       275 ~~-~~~~~~~~~~~~~~~~~~~~~-----~~~--~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~  346 (437)
T 3g0t_A          275 SG-KLYEREYPDLEESFGRLRFGE-----ALS--SSALYALSSGATHSAQWGMAAMLKACNDGEYNFRDSVIEYGRKARI  346 (437)
T ss_dssp             CH-HHHHCBCGGGHHHHSCSBHHH-----HHH--TTHHHHHHSSSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHH
T ss_pred             CH-HHhhhhhhcccccccccchhH-----HHH--HHHHhhhcCCCCHHHHHHHHHHHhCcHhHHHHHHHHHHHHHHHHHH
Confidence            53 22220100 000000000000     000  00000000011233444444443222  2   78889999999999


Q ss_pred             HHHHHhcCCCeEEe------cC-CCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcE
Q 037144          389 FERLVTSDKRFEVA------FP-RNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKV  461 (502)
Q Consensus       389 l~~~l~~~~~~~l~------~~-~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~  461 (502)
                      +.+.|+++ ++++.      .+ ....++++.+.+..                             ..++.+.|.++|..
T Consensus       347 l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~l~~~L~~~gi~  396 (437)
T 3g0t_A          347 MKKMFLDN-GFNIVYDKDGNEPLADGFYFTVGYKGMD-----------------------------SSKLIEKFVRYGMC  396 (437)
T ss_dssp             HHHHHHTT-TEEESSCEETTEECCSSSEEEEEETTCC-----------------------------HHHHHHHHHHTTEE
T ss_pred             HHHHHHHc-CCEEeccccCCCCCceeEEEEEecCCCC-----------------------------HHHHHHHHHHcCeE
Confidence            99999998 89887      34 44445555554211                             24567777777865


Q ss_pred             EEEeeeECC--EEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          462 FMTHAIVGG--IYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       462 ~~~~~~~~g--~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      +.+...+..  ..++|++++ .. ++++|++++++|+++.++
T Consensus       397 v~~~~~~~~~~~~~iRis~~-~~-~~e~i~~~~~~l~~~~~~  436 (437)
T 3g0t_A          397 AITLKTTGSKRNEAMRICTS-LL-PESQFPDLEKRLQMLNAE  436 (437)
T ss_dssp             CEESTTTTCCCTTCEEEECS-SS-CGGGHHHHHHHHHHHHHH
T ss_pred             EeeccccCCCCCCEEEEEEe-cC-CHHHHHHHHHHHHHHHhc
Confidence            443322211  157999987 33 667999999999988754

>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*

Probab=99.92  E-value=6.8e-23  Score=208.06  Aligned_cols=332  Identities=14%  Similarity=0.096  Sum_probs=210.1

Q ss_pred             HHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccC
Q 037144           93 VGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGREN  172 (502)
Q Consensus        93 ~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~  172 (502)
                      +.+.+...+......|..++...++++.    +++++|.+.         .+++++||+|+..++.+.+-.         
T Consensus        19 ~~~a~~~~l~~~~~~~~~~~~~~~l~~~----la~~~~~~~---------~i~~~sGt~al~~~l~~l~~~---------   76 (388)
T 1b9h_A           19 ERNGLVRALEQGQWWRMGGDEVNSFERE----FAAHHGAAH---------ALAVTNGTHALELALQVMGVG---------   76 (388)
T ss_dssp             HHHHHHHHHHTSCCBTTTCSHHHHHHHH----HHHHTTCSE---------EEEESCHHHHHHHHHHHTTCC---------
T ss_pred             HHHHHHHHHHcCCeeecCCHHHHHHHHH----HHHHhCCCe---------EEEeCCHHHHHHHHHHHcCCC---------
Confidence            4444444443322334455555666655    666777652         345555699998887765211         


Q ss_pred             CCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCCh
Q 037144          173 ISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPL  252 (502)
Q Consensus       173 ~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl  252 (502)
                       +++.|+++..+|.++..+++..|+   +++.+|++++ ++.+|+++|+++|++++      .+|+   +++++|.+.|+
T Consensus        77 -~gd~Vi~~~~~~~~~~~~~~~~g~---~~~~v~~~~~-~~~~d~~~l~~~i~~~~------~~v~---~~n~tG~~~~l  142 (388)
T 1b9h_A           77 -PGTEVIVPAFTFISSSQAAQRLGA---VTVPVDVDAA-TYNLDPEAVAAAVTPRT------KVIM---PVHMAGLMADM  142 (388)
T ss_dssp             -TTCEEEEESSSCTHHHHHHHHTTC---EEEEECBCTT-TCCBCHHHHHHHCCTTE------EEEC---CBCGGGCCCCH
T ss_pred             -CcCEEEECCCccHHHHHHHHHcCC---EEEEEecCCC-cCCCCHHHHHHhcCcCc------eEEE---EeCCccCcCCH
Confidence             567889999999999999999999   9999999863 47899999999986432      2444   78889999999


Q ss_pred             hHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchh--hhhhhcCCccc
Q 037144          253 KPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSC--LLSTLSTNPQY  330 (502)
Q Consensus       253 ~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~--l~~~~~~~~~y  330 (502)
                      ++|.++|++||+++|+|++|+.+.......   +..+..+++.+++.||+++++ ..|+++.++...  +....... .+
T Consensus       143 ~~i~~la~~~~~~li~D~a~~~g~~~~~~~---~~~~~~i~~~S~s~~K~l~g~-~~G~~~~~~~~~~~~~~~~~~~-~~  217 (388)
T 1b9h_A          143 DALAKISADTGVPLLQDAAHAHGARWQGKR---VGELDSIATFSFQNGKLMTAG-EGGAVVFPDGETEKYETAFLRH-SC  217 (388)
T ss_dssp             HHHHHHHHHHTCCBCEECTTCTTCEETTEE---GGGSSSCEEEECCTTSSSCSS-SCEEEEECTTCHHHHHHHHHHT-BT
T ss_pred             HHHHHHHHHcCCEEEEecchhcCCccCCee---cccccceEEEEccCCCcccCC-CeEEEEECCHHHHHHHHHHHHH-hC
Confidence            999999999999999999998654331111   111224677888889999765 467777765533  22221100 00


Q ss_pred             ccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-----C
Q 037144          331 LKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP-----R  405 (502)
Q Consensus       331 l~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~-----~  405 (502)
                       ....       ....+.......+.+...+.++....  ..+.+.+.+++..++++++.+.|+++|++++..+     +
T Consensus       218 -~~~~-------~~~~~~~~~~g~~~~~~~~~~a~~~~--~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~  287 (388)
T 1b9h_A          218 -GRPR-------DDRRYFHKIAGSNMRLNEFSASVLRA--QLARLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADR  287 (388)
T ss_dssp             -TCCT-------TCSSCCCCSCCCBCBCBHHHHHHHHH--HHTTHHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCB
T ss_pred             -CCCc-------cCccceeecccccCCcCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCc
Confidence             0000       00000000111111223344443333  2455777888889999999999999989988752     2


Q ss_pred             C-eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeE---C------------
Q 037144          406 N-FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIV---G------------  469 (502)
Q Consensus       406 ~-~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~---~------------  469 (502)
                      . .++++|++.+..                          .....++.+.|.++|..+..+...   .            
T Consensus       288 ~~~~~~~~~~~~~~--------------------------~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~  341 (388)
T 1b9h_A          288 NSHYMAMFRIPGLT--------------------------EERRNALVDRLVEAGLPAFAAFRAIYRTDAFWELGAPDES  341 (388)
T ss_dssp             CCCSEEEEECTTCC--------------------------HHHHHHHHHHHHHTTCCEEECCCCGGGSHHHHHSSCCSSC
T ss_pred             cceEEEEEEeCCcC--------------------------cccHHHHHHHHHHCCCCcccccCccccChHhHhcCCCccc
Confidence            2 456777764310                          011346777777788754332110   0            


Q ss_pred             --------------CEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          470 --------------GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       470 --------------g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                                    ....||+++...+++++||+++++.|+++.++
T Consensus       342 ~~~~~~~~~~~~~~~~~~l~l~~~~~~~t~edi~~~~~~l~~~~~~  387 (388)
T 1b9h_A          342 VDAIARRCPNTDAISSDCVWLHHRVLLAGEPELHATAEIIADAVAR  387 (388)
T ss_dssp             HHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHH
T ss_pred             ccccccCCHHHHHHHhCeEEecCCCCCCCHHHHHHHHHHHHHHHhh
Confidence                          02369999864432788999999999998764

>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}

Probab=99.92  E-value=2.4e-23  Score=211.59  Aligned_cols=326  Identities=13%  Similarity=0.053  Sum_probs=216.9

Q ss_pred             HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144           90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG  169 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~  169 (502)
                      +..+.+.+...+......|....+..++++++.+++.+.+|.+...     ...++|+||++|+..++.+...       
T Consensus        46 ~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~-----~~v~~t~g~~~al~~~~~~l~~-------  113 (391)
T 3h14_A           46 PRGAVEALAKSLETDALGYTVALGLPALRQRIARLYGEWYGVDLDP-----GRVVITPGSSGGFLLAFTALFD-------  113 (391)
T ss_dssp             CHHHHHHHHHHHC----------CCHHHHHHHHHHHHHHHCCCCCG-----GGEEEESSHHHHHHHHHHHHCC-------
T ss_pred             CHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHHhCCCCCH-----HHEEEecChHHHHHHHHHHhcC-------
Confidence            3445666666665544556655567899999999999999964321     2689999999999887776543       


Q ss_pred             ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144          170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV  249 (502)
Q Consensus       170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i  249 (502)
                          +++.|+++..+|.++..+++..|+   +++.+|+++++++.+|+++|+++   +      +.+|+++.++|++|.+
T Consensus       114 ----~gd~vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~---~------~~~v~i~~p~nptG~~  177 (391)
T 3h14_A          114 ----SGDRVGIGAPGYPSYRQILRALGL---VPVDLPTAPENRLQPVPADFAGL---D------LAGLMVASPANPTGTM  177 (391)
T ss_dssp             ----TTCEEEEEESCCHHHHHHHHHTTC---EEEEEECCGGGTTSCCHHHHTTS---C------CSEEEEESSCTTTCCC
T ss_pred             ----CCCEEEEcCCCCccHHHHHHHcCC---EEEEeecCcccCCCCCHHHHHhc---C------CeEEEECCCCCCCCcc
Confidence                567888889999999999999999   99999998655578999999876   2      3378888999999999


Q ss_pred             CC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhhhc
Q 037144          250 DP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLS  325 (502)
Q Consensus       250 dp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~  325 (502)
                      -|   +++|+++|++||+++++|++|+.+..... .... ......+.++.+++|+++ .+.+.|+++.++. .. +.+.
T Consensus       178 ~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~-~~~~-~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~-~~-~~~~  253 (391)
T 3h14_A          178 LDHAAMGALIEAAQAQGASFISDEIYHGIEYEAK-AVTA-LELTDECYVINSFSKYFSMTGWRVGWMVVPED-QV-RVVE  253 (391)
T ss_dssp             CCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSC-CCCG-GGTCSSSEEEEESSSTTCCTTSCCEEEECCGG-GH-HHHH
T ss_pred             CCHHHHHHHHHHHHHcCCEEEEECcchhcccCCC-CcCh-hhcCCCEEEEEechhccCCccceeEEEEeCHH-HH-HHHH
Confidence            87   88999999999999999999987554221 1111 112245567778999997 5566788876543 22 2221


Q ss_pred             CCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC
Q 037144          326 TNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF-GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP  404 (502)
Q Consensus       326 ~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~  404 (502)
                      ....+...                       ....+..++++..+ +.+.+.+..++..++++++.+.|++. ++..+.+
T Consensus       254 ~~~~~~~~-----------------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~  309 (391)
T 3h14_A          254 RIAQNMFI-----------------------CAPHASQVAALAALDCDAELQANLDVYKANRKLMLERLPKA-GFTRIAP  309 (391)
T ss_dssp             HHHHHTTC-----------------------CCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH-TCCCBCC
T ss_pred             HHHhhhcc-----------------------CCCHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHc-CCCcccC
Confidence            10000000                       00223333333322 56778889999999999999999987 4444334


Q ss_pred             CCeeEEE-EEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcEEEEeeeEC---CEEEEEEEec
Q 037144          405 RNFSLVC-FRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKVFMTHAIVG---GIYVLRFAAG  479 (502)
Q Consensus       405 ~~~~~v~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~---g~~~lR~~~~  479 (502)
                      +..+++. +.+.....                           ...++.+++.++ |..+.++..+.   +..++|++++
T Consensus       310 ~~~~~~~~~~~~~~~~---------------------------~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~iRis~~  362 (391)
T 3h14_A          310 PDGAFYVYADVSDLTD---------------------------DSRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFSYA  362 (391)
T ss_dssp             CCBTTEEEEECTTTCS---------------------------CHHHHHHHHHHHHCEECEEGGGTCTTTGGGEEEEECC
T ss_pred             CCeeEEEEEecCccCC---------------------------CHHHHHHHHHHHCCEEEcCchhhCCCCCCCeEEEEec
Confidence            5444443 33432111                           023566666665 76544433332   3579999986


Q ss_pred             CCCCcHHHHHHHHHHHHHHHHh
Q 037144          480 NSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       480 ~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      .   ++++|+++++.|.++.++
T Consensus       363 ~---~~~~i~~~l~~l~~~~~~  381 (391)
T 3h14_A          363 R---ATADIEEGLDRLEAFMQA  381 (391)
T ss_dssp             S---CHHHHHHHHHHHHHHHHH
T ss_pred             C---CHHHHHHHHHHHHHHHHH
Confidence            4   568999999999998765

>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}

Probab=99.91  E-value=7.8e-24  Score=216.81  Aligned_cols=331  Identities=11%  Similarity=0.057  Sum_probs=222.9

Q ss_pred             HHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCC-cEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144           91 GIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNG-GGVIQGTTCEALLCTLTAARDRVLKKIG  169 (502)
Q Consensus        91 ~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~-~g~~t~ggt~a~~~al~~a~~~~~~~~~  169 (502)
                      ..+.+.+...++.....|...++..++++.+.+|+.+.+|.+...     . .+++|+||++|+..++.+...       
T Consensus        41 ~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~-----~~~v~~t~g~~~al~~~~~~~~~-------  108 (411)
T 2o0r_A           41 PKMLQAAQDAIAGGVNQYPPGPGSAPLRRAIAAQRRRHFGVDYDP-----ETEVLVTVGATEAIAAAVLGLVE-------  108 (411)
T ss_dssp             HHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCT-----TTSEEEEEHHHHHHHHHHHHHCC-------
T ss_pred             HHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCC-----CceEEEeCCHHHHHHHHHHHhcC-------
Confidence            445566655554333456555667899999999999999864221     2 589999999999888776632       


Q ss_pred             ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCC-CCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144          170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKS-SSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA  248 (502)
Q Consensus       170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~-~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~  248 (502)
                          +++.|+++..+|.++..+++..|+   +++.+|++.+ .++.+|+++|+++++++      +.+|+++.++|++|.
T Consensus       109 ----~gd~Vl~~~~~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~d~~~l~~~l~~~------~~~v~l~~~~nptG~  175 (411)
T 2o0r_A          109 ----PGSEVLLIEPFYDSYSPVVAMAGA---HRVTVPLVPDGRGFALDADALRRAVTPR------TRALIINSPHNPTGA  175 (411)
T ss_dssp             ----TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECEEETTEEECCHHHHHHHCCTT------EEEEEEESSCTTTCC
T ss_pred             ----CCCEEEEeCCCcHhHHHHHHHcCC---EEEEeeccccccCCCCCHHHHHHhhccC------ceEEEEeCCCCCCCC
Confidence                567888899999999999999999   9999998642 24679999999998642      447788889999999


Q ss_pred             cCC---hhHHHHHHHHhCCEEEeecccccccccCccchhh--hcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhh
Q 037144          249 VDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF--IDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLS  322 (502)
Q Consensus       249 idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~  322 (502)
                      +-|   +++|+++|++||+++++|++|+.+.+........  +.+....|.++.++||+++.| ..+|+++++ +... +
T Consensus       176 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~-~~~~-~  253 (411)
T 2o0r_A          176 VLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMFNCTGWKIGWACGP-AELI-A  253 (411)
T ss_dssp             CCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCTTTCEEEEECC-HHHH-H
T ss_pred             CCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeechhhcCCccceEEEEeeC-HHHH-H
Confidence            965   5899999999999999999998765422111111  111236789999999998743 347888874 3332 2


Q ss_pred             hhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144          323 TLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA  402 (502)
Q Consensus       323 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~  402 (502)
                      .+.....+..                 ++   ........+..+++. +.++++++.++..++++++.+.|++. ++++.
T Consensus       254 ~l~~~~~~~~-----------------~~---~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~  311 (411)
T 2o0r_A          254 GVRAAKQYLS-----------------YV---GGAPFQPAVALALDT-EDAWVAALRNSLRARRDRLAAGLTEI-GFAVH  311 (411)
T ss_dssp             HHHHHHHHHT-----------------SC---CCTTHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHH-TCEEC
T ss_pred             HHHHHHhhcc-----------------CC---CChHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHHc-CCEec
Confidence            2211111100                 00   001122233344443 46778888999999999999999887 78876


Q ss_pred             cCCCee-EEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeE-C----------
Q 037144          403 FPRNFS-LVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIV-G----------  469 (502)
Q Consensus       403 ~~~~~~-~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~-~----------  469 (502)
                      . +..+ ++++.+.....                      .  +  ..++.+++. +.|..+.++..+ .          
T Consensus       312 ~-~~~g~~~~~~~~~~~~----------------------~--~--~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~  364 (411)
T 2o0r_A          312 D-SYGTYFLCADPRPLGY----------------------D--D--STEFCAALPEKVGVAAIPMSAFCDPAAGQASQQA  364 (411)
T ss_dssp             C-CCBSSEEEEECGGGTC----------------------C--C--HHHHHHHHHHHHSEECEEGGGGSCCC--------
T ss_pred             C-CCeeEEEEEecCCCCC----------------------C--C--HHHHHHHHHHhCCEEEcChhhhCCCccccccccc
Confidence            4 4444 55666542100                      0  0  235566665 457655443322 1          


Q ss_pred             --CEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144          470 --GIYVLRFAAGNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       470 --g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~  500 (502)
                        +..++|+++.+   ++++|+++++.|.++.+
T Consensus       365 ~~~~~~iRis~~~---~~e~i~~~~~~l~~~~~  394 (411)
T 2o0r_A          365 DVWNHLVRFTFCK---RDDTLDEAIRRLSVLAE  394 (411)
T ss_dssp             CCGGGCEEEECCS---CHHHHHHHHHHHGGGGC
T ss_pred             cCCCCeEEEEecC---CHHHHHHHHHHHHHHHh
Confidence              34689999863   67799999999987654

>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*

Probab=99.91  E-value=1.5e-23  Score=211.86  Aligned_cols=307  Identities=10%  Similarity=0.049  Sum_probs=206.3

Q ss_pred             CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCC
Q 037144          105 GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQT  184 (502)
Q Consensus       105 ~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~  184 (502)
                      ...|...++..++++.+.+|+.   +.+.+       ..++|+||++|+..++.+...           +++.|+++..+
T Consensus        56 ~~~y~~~~g~~~l~~~la~~~~---~~~~~-------~v~~~~g~~~a~~~~~~~l~~-----------~gd~Vl~~~~~  114 (375)
T 3op7_A           56 KLNYGWIEGSPAFKKSVSQLYT---GVKPE-------QILQTNGATGANLLVLYSLIE-----------PGDHVISLYPT  114 (375)
T ss_dssp             CCSSCCTTCCHHHHHHHHTTSS---SCCGG-------GEEEESHHHHHHHHHHHHHCC-----------TTCEEEEEESS
T ss_pred             CcCCCCCCChHHHHHHHHHHhc---cCChh-------hEEEcCChHHHHHHHHHHhcC-----------CCCEEEEeCCC
Confidence            3445555566777776554431   34443       689999999999888776543           67788899999


Q ss_pred             chhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hhHHHHHHHH
Q 037144          185 HCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LKPLCDVAKQ  261 (502)
Q Consensus       185 H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~eI~~i~~~  261 (502)
                      |.++..+++..|.   +++.+|+++++++.+|+++|++++++++      .+|+++.++|++|.+-|   +++|+++|++
T Consensus       115 ~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~~------~~v~~~~~~nptG~~~~~~~l~~i~~la~~  185 (375)
T 3op7_A          115 YQQLYDIPKSLGA---EVDLWQIEEENGWLPDLEKLRQLIRPTT------KMICINNANNPTGAVMDRTYLEELVEIASE  185 (375)
T ss_dssp             CTHHHHHHHHTTC---EEEEEEEEGGGTTEECHHHHHHHCCTTC------CEEEEESSCTTTCCCCCHHHHHHHHHHHHT
T ss_pred             chhHHHHHHHcCC---EEEEEeccccCCCCCCHHHHHHhhccCC------eEEEEcCCCCCCCCCCCHHHHHHHHHHHHH
Confidence            9999999999999   9999999754457799999999986433      37788899999999999   9999999999


Q ss_pred             hCCEEEeeccccccccc-CccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCcccccCccCCCC
Q 037144          262 FGIWVHVDAAYAGSACI-CPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQE  339 (502)
Q Consensus       262 ~g~~lhVDaA~g~~~~~-~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~  339 (502)
                      ||+++++|++|+.+... .+....    ....+.+..+++|+++.| ..+|+++. ++... +.+.....+...      
T Consensus       186 ~~~~li~De~~~~~~~~~~~~~~~----~~~~~i~~~s~sK~~~~~G~r~G~v~~-~~~l~-~~~~~~~~~~~~------  253 (375)
T 3op7_A          186 VGAYILSDEVYRSFSELDVPSIIE----VYDKGIAVNSLSKTYSLPGIRIGWVAA-NHQVT-DILRDYRDYTMI------  253 (375)
T ss_dssp             TTCEEEEECCSCCCSSSCCCCHHH----HCTTEEEEEESSSSSSCGGGCCEEEEC-CHHHH-HHHTTTGGGTTS------
T ss_pred             cCCEEEEEcccccccccCCCchhh----hcCCEEEEeEChhhcCCcccceEEEEe-CHHHH-HHHHHHHhhhcc------
Confidence            99999999999875442 111111    124457788899999744 55688776 44433 233221111100      


Q ss_pred             CcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecC
Q 037144          340 PKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPS  417 (502)
Q Consensus       340 ~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~  417 (502)
                                    +   ...+..+++...+  ..+.+++..++..++++++.+.|++.|++++..+.....+.+.+...
T Consensus       254 --------------~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~  316 (375)
T 3op7_A          254 --------------C---AGVFDDLVAQLALAHYQEILERNRHILEENLAILDQWIEEEPLVSYIRPAVVSTSFVKIAVD  316 (375)
T ss_dssp             --------------C---CCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEECCCSSSSCEEEEECCS
T ss_pred             --------------C---CCcHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCCeEEEeEEcCCC
Confidence                          0   0222223332222  23456677777789999999999998899877443333333333321


Q ss_pred             cchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHH-HhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHH
Q 037144          418 AVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESI-NVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQ  496 (502)
Q Consensus       418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~  496 (502)
                       .                    +       ..++.+++ .+.|..+.++..+....++|++++.   ++++|+++++.|.
T Consensus       317 -~--------------------~-------~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~---~~~~i~~~l~~l~  365 (375)
T 3op7_A          317 -M--------------------P-------MEDFCLQLLQEHGVLLVPGNRFERDGYVRLGFAC---EQETLIKGLEKLS  365 (375)
T ss_dssp             -S--------------------C-------HHHHHHHHHHHHCEECEEGGGGTCTTEEEECCCS---CHHHHHHHHHHHH
T ss_pred             -C--------------------C-------HHHHHHHHHHhCCEEEeChhhhCCCCeEEEEecC---CHHHHHHHHHHHH
Confidence             1                    0       23455555 3568765544444446789999763   3479999999999


Q ss_pred             HHHHh
Q 037144          497 EHLEA  501 (502)
Q Consensus       497 ~~~~~  501 (502)
                      ++.++
T Consensus       366 ~~l~~  370 (375)
T 3op7_A          366 QFLRR  370 (375)
T ss_dssp             HHHGG
T ss_pred             HHHHH
Confidence            88764

>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*

Probab=99.91  E-value=1.1e-23  Score=216.87  Aligned_cols=345  Identities=10%  Similarity=0.049  Sum_probs=224.5

Q ss_pred             HHHHHHHHHhhcCC---CCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCC-cEEEcCCchHHHHHHHHHHHHHHH
Q 037144           90 AGIVGEMLSSGFNV---VGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNG-GGVIQGTTCEALLCTLTAARDRVL  165 (502)
Q Consensus        90 ~~~~~~~l~~~~n~---~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~-~g~~t~ggt~a~~~al~~a~~~~~  165 (502)
                      +..+.+.+...++.   ....|....+..++++++.+|+.+.+|.+...     . ..++|+||++|+..++.+...   
T Consensus        52 ~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~-----~~~v~~~~g~~~a~~~~~~~~~~---  123 (429)
T 1yiz_A           52 PKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTINP-----MTEVLVTVGAYEALYATIQGHVD---  123 (429)
T ss_dssp             CHHHHHHHHHHHTCSCGGGGSCCCSSCCHHHHHHHHHHHHHHHTSCCCT-----TTSEEEESHHHHHHHHHHHHHCC---
T ss_pred             CHHHHHHHHHHHhccccCccCCCCCCCcHHHHHHHHHHHHHHhCCCCCC-----cCCEEEecChHHHHHHHHHHhcC---
Confidence            34556666666644   23345544567889999999999998864221     2 589999999999888777642   


Q ss_pred             HHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCC--------CcccCHHHHHHHHHHHHhcCCccEEE
Q 037144          166 KKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSS--------SYGLSAESVLSQINLDVEAELIPLFL  237 (502)
Q Consensus       166 ~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~--------~~~~d~~~Le~~i~~~~~~g~~p~~V  237 (502)
                              +++.|+++..+|.++..+++..|.   +++.+|++.++        ++.+|+++|+++++++      +.+|
T Consensus       124 --------~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v  186 (429)
T 1yiz_A          124 --------EGDEVIIIEPFFDCYEPMVKAAGG---IPRFIPLKPNKTGGTISSADWVLDNNELEALFNEK------TKMI  186 (429)
T ss_dssp             --------TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCCTT------EEEE
T ss_pred             --------CCCEEEEcCCCchhHHHHHHHcCC---EEEEEeCCcccccccccccCcccCHHHHHHHhccC------ceEE
Confidence                    567788888899999999999999   99999987532        4689999999988532      4477


Q ss_pred             EEecCCccccccCC---hhHHHHHHHHhCCEEEeecccccccccCccchhh--hcCCCCCCeeEEccCCcCCCC-CcceE
Q 037144          238 CATVGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF--IDGVECVDSFSFNPHKWLFTT-LDCCC  311 (502)
Q Consensus       238 v~t~gtt~~G~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~~p-~~~g~  311 (502)
                      +++.++|++|.+-|   +++|+++|++||+++++|++|+++.+........  +.+..+.|.++.++||+++.| ..+|+
T Consensus       187 ~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~  266 (429)
T 1yiz_A          187 IINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGW  266 (429)
T ss_dssp             EEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEE
T ss_pred             EECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEEecchhccCCCCcceEE
Confidence            77899999999975   9999999999999999999998765422111111  111235788999999998733 34888


Q ss_pred             EEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh----c--HHHHHHHHHHHHHH
Q 037144          312 LWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF----G--VANLRNFIRSHVGM  385 (502)
Q Consensus       312 ~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~----g--~~g~~~~~~~~~~l  385 (502)
                      +++++ ... +.+.....+..                 ++   ........+..+++..    +  .+.+++..++..++
T Consensus       267 ~~~~~-~~~-~~l~~~~~~~~-----------------~~---~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  324 (429)
T 1yiz_A          267 AYGPE-ALL-KNLQMVHQNCV-----------------YT---CATPIQEAIAVGFETELKRLKSPECYFNSISGELMAK  324 (429)
T ss_dssp             EESCH-HHH-HHHHHHHHTTT-----------------CC---CCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHH
T ss_pred             EEeCH-HHH-HHHHHHHhhcc-----------------cC---CChHHHHHHHHHHhcccccccchHHHHHHHHHHHHHH
Confidence            88753 322 22211100000                 00   0001112333444431    3  45678888889999


Q ss_pred             HHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEE
Q 037144          386 AKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMT  464 (502)
Q Consensus       386 a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~  464 (502)
                      ++++.+.|++. ++++..+....++++.+......            ....  ....  .....++.+++. +.|..+.+
T Consensus       325 ~~~l~~~L~~~-g~~~~~~~~g~~~~~~~~~~~~~------------~~~~--~~~~--~~~~~~l~~~l~~~~gv~v~~  387 (429)
T 1yiz_A          325 RDYMASFLAEV-GMNPTVPQGGYFMVADWSSLDSK------------VDLT--QETD--ARKDYRFTKWMTKSVGLQGIP  387 (429)
T ss_dssp             HHHHHHHHHHH-TCEEEECSBSSEEEEECCSSCTT------------TTCC--SSSS--SCHHHHHHHHHHHHTSEECBC
T ss_pred             HHHHHHHHHhC-CCcccCCCcceEEEEEccccccc------------cccc--cccc--CCCHHHHHHHHHHhCCEEEeC
Confidence            99999999887 78876443344666666431000            0000  0000  001235666665 46764433


Q ss_pred             eeeEC-------CEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          465 HAIVG-------GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       465 ~~~~~-------g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      +..+.       +..++|++++   +++++|+++++.|.++.++
T Consensus       388 g~~f~~~~~~~~~~~~iRis~~---~~~e~i~~~l~~l~~~l~~  428 (429)
T 1yiz_A          388 PSAFYSEPNKHLGEDFVRYCFF---KKDENLQKAAEILRKWKGS  428 (429)
T ss_dssp             GGGGSCGGGGGGTTTEEEEECC---SCHHHHHHHHHHHHHHSCC
T ss_pred             chHhCCCcccCCCCCeEEEEec---CCHHHHHHHHHHHHHhccC
Confidence            32232       2568999986   3678999999999987654

>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A

Probab=99.91  E-value=2.8e-22  Score=202.26  Aligned_cols=300  Identities=13%  Similarity=0.062  Sum_probs=209.7

Q ss_pred             ccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCch
Q 037144          107 DWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHC  186 (502)
Q Consensus       107 ~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~  186 (502)
                      .|..... .++++.+.+|+.+.+|++...     ...++|+|+++++..++.+...           +++.|+++..+|.
T Consensus        65 ~y~~~~~-~~l~~~la~~l~~~~g~~~~~-----~~v~~~~G~~~al~~~~~~l~~-----------~gd~Vl~~~~~y~  127 (369)
T 3cq5_A           65 RYPERDA-VELRDELAAYITKQTGVAVTR-----DNLWAANGSNEILQQLLQAFGG-----------PGRTALGFQPSYS  127 (369)
T ss_dssp             SCCCTTC-HHHHHHHHHHHHHHHCCCCCG-----GGEEEESHHHHHHHHHHHHHCS-----------TTCEEEEEESSCT
T ss_pred             cCCCccH-HHHHHHHHHhhhhcccCCCCh-----HhEEECCChHHHHHHHHHHhcC-----------CCCEEEEcCCChH
Confidence            4433333 689999999999987764221     2689999999998777765532           5678888889999


Q ss_pred             hHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEE
Q 037144          187 AFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWV  266 (502)
Q Consensus       187 s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~l  266 (502)
                      ++..+++..|.   +++.+|.+.  ++.+|+++|++++++.     .+.+|+++.++|++|.+.|++++.++|+.+++++
T Consensus       128 ~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~l  197 (369)
T 3cq5_A          128 MHPILAKGTHT---EFIAVSRGA--DFRIDMDVALEEIRAK-----QPDIVFVTTPNNPTGDVTSLDDVERIINVAPGIV  197 (369)
T ss_dssp             HHHHHHHHTTC---EEEEEECCT--TSSCCHHHHHHHHHHH-----CCSEEEEESSCTTTCCCCCHHHHHHHHHHCSSEE
T ss_pred             HHHHHHHHcCC---EEEEecCCc--CCCCCHHHHHHHhhcc-----CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEE
Confidence            99999999999   999999764  4689999999999762     1236777899999999999999999999999999


Q ss_pred             EeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCcccccCccCCCCCccccc
Q 037144          267 HVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEV  345 (502)
Q Consensus       267 hVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~  345 (502)
                      ++|++|+.+... .............+.++.++||+++.| ..+|++++++. .. +.+......               
T Consensus       198 i~De~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~-~~-~~l~~~~~~---------------  259 (369)
T 3cq5_A          198 IVDEAYAEFSPS-PSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANPA-FI-DAVMLVRLP---------------  259 (369)
T ss_dssp             EEECTTGGGCCS-CCGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEECTH-HH-HHHHTTSCT---------------
T ss_pred             EEECCchhhcCC-cchHHHHhhCCCCEEEEEechHhcCCcccceEEEEeCHH-HH-HHHHHcCCC---------------
Confidence            999999876532 111121121111457888999999744 45788887643 22 222111100               


Q ss_pred             CCCcccccCCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhh
Q 037144          346 GYKDWQITLCRRFRSLKLWVVIRNF-GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLR  424 (502)
Q Consensus       346 ~~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~  424 (502)
                          ++      ...+..+++...+ ..+.+++..++..++++++.+.|++. ++++. ++..+++++.+. ..      
T Consensus       260 ----~~------~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~-~~------  320 (369)
T 3cq5_A          260 ----YH------LSALSQAAAIVALRHSADTLGTVEKLSVERVRVAARLEEL-GYAVV-PSESNFVFFGDF-SD------  320 (369)
T ss_dssp             ----TC------SCHHHHHHHHHHHHTHHHHHTHHHHHHHHHHHHHHHHHHH-TCEEE-CCSSSEEEEECC-SS------
T ss_pred             ----CC------CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhC-CCEEC-CCCCeEEEEECC-CC------
Confidence                00      1233344444433 23457788888999999999999885 78886 556667777553 11      


Q ss_pred             hcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144          425 TKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       425 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~  500 (502)
                                             ..++.+++.+.|..+ .+.  ....++|++++    +++++++++++|+++.+
T Consensus       321 -----------------------~~~l~~~l~~~gi~v-~~~--~~~~~iRis~~----~~~~i~~~~~~l~~~~~  366 (369)
T 3cq5_A          321 -----------------------QHAAWQAFLDRGVLI-RDV--GIAGHLRTTIG----VPEENDAFLDAAAEIIK  366 (369)
T ss_dssp             -----------------------HHHHHHHHHHTTEEC-BCC--SCTTEEEEECC----CHHHHHHHHHHHHHHHT
T ss_pred             -----------------------HHHHHHHHHHCCEEE-EEC--CCCCeEEEEeC----CHHHHHHHHHHHHHHHh
Confidence                                   235666676678643 332  22468999986    56799999999998764

>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*

Probab=99.91  E-value=1.4e-23  Score=211.70  Aligned_cols=332  Identities=11%  Similarity=0.044  Sum_probs=208.3

Q ss_pred             HHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCc
Q 037144           91 GIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGR  170 (502)
Q Consensus        91 ~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~  170 (502)
                      ..+.+.+...+....  +..++...    ++.+.+++++|.+         .+++|+|||+|+..++.+++.. .     
T Consensus        13 ~~v~~a~~~~~~~~~--~~~~~~~~----~l~~~la~~~~~~---------~v~~~~ggt~al~~~~~~~~~~-~-----   71 (375)
T 2fnu_A           13 KEDKKAVLEVLNSKQ--LTQGKRSL----LFEEALCEFLGVK---------HALVFNSATSALLTLYRNFSEF-S-----   71 (375)
T ss_dssp             HHHHHHHHHHHTSSC--CSSSHHHH----HHHHHHHHHHTCS---------EEEEESCHHHHHHHHHHHSSCC-C-----
T ss_pred             HHHHHHHHHHHHcCc--ccCChHHH----HHHHHHHHHhCCC---------eEEEeCCHHHHHHHHHHHhccc-C-----
Confidence            334555555554321  22234333    4556677777875         3799999999998888776210 0     


Q ss_pred             cCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC
Q 037144          171 ENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD  250 (502)
Q Consensus       171 ~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id  250 (502)
                        .+++.|+++..+|.++..+++..|+   +++.+|++++  +.+|+++|+++++++      +.+|+++.+   +|.+.
T Consensus        72 --~~gd~Vl~~~~~~~~~~~~~~~~g~---~~~~~~~~~~--~~~d~~~l~~~i~~~------~~~v~~~~~---tG~~~  135 (375)
T 2fnu_A           72 --ADRNEIITTPISFVATANMLLESGY---TPVFAGIKND--GNIDELALEKLINER------TKAIVSVDY---AGKSV  135 (375)
T ss_dssp             --TTSCEEEECSSSCTHHHHHHHHTTC---EEEECCBCTT--SSBCGGGSGGGCCTT------EEEEEEECG---GGCCC
T ss_pred             --CCCCEEEECCCccHhHHHHHHHCCC---EEEEeccCCC--CCCCHHHHHhhcCcC------ceEEEEeCC---cCCcc
Confidence              1567899999999999999999999   9999999763  489999999988643      235666554   89999


Q ss_pred             ChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeC-chhhhhhhcCCcc
Q 037144          251 PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKD-PSCLLSTLSTNPQ  329 (502)
Q Consensus       251 pl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~-~~~l~~~~~~~~~  329 (502)
                      |+++|.++|++||+++|+|++|+.+......   .+.....+++.++++||+++ | |.|++++++ +.... .+..   
T Consensus       136 ~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~---~~~~~~~i~~~s~s~~K~~~-~-g~g~~~~~~~~~~~~-~~~~---  206 (375)
T 2fnu_A          136 EVESVQKLCKKHSLSFLSDSSHALGSEYQNK---KVGGFALASVFSFHAIKPIT-T-AEGGAVVTNDSELHE-KMKL---  206 (375)
T ss_dssp             CHHHHHHHHHHHTCEEEEECTTCTTCEETTE---ETTSSSSEEEEECCTTSSSC-C-SSCEEEEESCHHHHH-HHHH---
T ss_pred             CHHHHHHHHHHcCCEEEEECccccCCeECCe---eccccCCeEEEeCCCCCCcc-c-cCceEEEeCCHHHHH-HHHH---
Confidence            9999999999999999999999776543211   11212235566777889984 4 688888854 43322 1110   


Q ss_pred             cccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC----
Q 037144          330 YLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR----  405 (502)
Q Consensus       330 yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~----  405 (502)
                      +.......   . ....+.  ....+.++....+.+++.....++++++.++..++++++.+.|+++|++++..++    
T Consensus       207 ~~~~~~~~---~-~~~~~~--~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~  280 (375)
T 2fnu_A          207 FRSHGMLK---K-DFFEGE--VKSIGHNFRLNEIQSALGLSQLKKAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDK  280 (375)
T ss_dssp             HTBTTEEE---S-SSSCEE--ESSCCCBCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSC
T ss_pred             HHhcCCcc---c-cccccc--cccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCCC
Confidence            10000000   0 000000  0001111122233333333345678889999999999999999999899887541    


Q ss_pred             -CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEe---ee----EC--------
Q 037144          406 -NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTH---AI----VG--------  469 (502)
Q Consensus       406 -~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~---~~----~~--------  469 (502)
                       ...++.+.+...+.                      .    ...++.+.|.++|..+...   ..    +.        
T Consensus       281 ~~~~~~~~~~~~~~~----------------------~----~~~~l~~~L~~~gi~v~~~~~p~~~~~~~~~~~~~~~~  334 (375)
T 2fnu_A          281 SSNHLYPILMHQKFF----------------------T----CKKLILESLHKRGILAQVHYKPIYQYQLYQQLFNTAPL  334 (375)
T ss_dssp             CCCSCEEEEECGGGG----------------------G----GHHHHHHHHHHTTEECBCCCCCGGGSHHHHHHHCCCCC
T ss_pred             cceEEEEEEeCcccc----------------------c----hHHHHHHHHHHCCCCccccccccccchhhhcCCCccCC
Confidence             12233455432100                      0    1345677777777643211   00    00        


Q ss_pred             ------CEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          470 ------GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       470 ------g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                            ...++|+++. +.++++|+++++++|+++.++
T Consensus       335 ~~~~~~~~~~lRi~~~-~~~t~~~i~~~~~~l~~~~~~  371 (375)
T 2fnu_A          335 KSAEDFYHAEISLPCH-ANLNLESVQNIAHSVLKTFES  371 (375)
T ss_dssp             HHHHHHHHHEEEECCC-TTCCHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHhCEEEecCC-CCCCHHHHHHHHHHHHHHHHH
Confidence                  1268999975 556788999999999988754

>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*

Probab=99.91  E-value=2.9e-24  Score=224.59  Aligned_cols=344  Identities=11%  Similarity=0.033  Sum_probs=211.0

Q ss_pred             HHHHHHHHHHhhcCC-CC------cccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHH
Q 037144           89 VAGIVGEMLSSGFNV-VG------LDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAAR  161 (502)
Q Consensus        89 ~~~~~~~~l~~~~n~-~~------~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~  161 (502)
                      ++..+.+.+...+.+ ..      ..|..++...++|+.+++++++++|++.+.    ....++.++|+.+|+.++.+..
T Consensus        56 ~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~a~~~g~~~~~----~~~~V~~~sGs~an~~~~~all  131 (483)
T 1rv3_A           56 ASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQC----WGVNVQPYSGSPANFAVYTALV  131 (483)
T ss_dssp             CCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTCCTTT----EEEECCCSSHHHHHHHHHHHHT
T ss_pred             CCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHHHHHHHHhCCCccc----CceEEEECCcHHHHHHHHHHhc
Confidence            344555565555432 21      124455677899999999999999997420    0012444555688876666543


Q ss_pred             HHHHHHhCccCCCCeEEEeCCCCchhHHH--------HHHHcCCCCCCEEEEec--CCCCCcccCHHHHHHHHHHHHhcC
Q 037144          162 DRVLKKIGRENISKLVVYSSDQTHCAFQK--------AAQIVGIDRKNIRAIKT--TKSSSYGLSAESVLSQINLDVEAE  231 (502)
Q Consensus       162 ~~~~~~~~~~~~~~~~v~~s~~~H~s~~~--------aa~~~Glg~~~v~~v~~--~~~~~~~~d~~~Le~~i~~~~~~g  231 (502)
                      +           +++.|++++..|.++..        .++..|.   .++.++.  ++ +++.+|+++|++++++..   
T Consensus       132 ~-----------pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~---~~~~v~~~~~~-~~~~iD~d~le~~i~~~~---  193 (483)
T 1rv3_A          132 E-----------PHGRIMGLDLPDGGHLTHGFMTDKKKISATSI---FFESMAYKVNP-DTGYIDYDRLEENARLFH---  193 (483)
T ss_dssp             C-----------TTCEEEEECGGGTCCGGGCCBCSSCBCSHHHH---HSEEEEECBCT-TTCSBCHHHHHHHHHHHC---
T ss_pred             C-----------CCCEEEEecCccCcCcchhhhhcccCcccccc---eEEEEECcccc-CCCcCCHHHHHHHHhhcC---
Confidence            2           67889998888876542        2344453   2455554  53 358999999999997321   


Q ss_pred             CccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceE
Q 037144          232 LIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCC  311 (502)
Q Consensus       232 ~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~  311 (502)
                        |.+|++ .+++++ .+.|+++|+++|+++|+++|+|+||+.+....+.....+   ..+|++++++||++.+|.+ |+
T Consensus       194 --tklIi~-~~sn~~-~~~dl~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~---~~~div~~s~~K~l~Gprg-G~  265 (483)
T 1rv3_A          194 --PKLIIA-GTSCYS-RNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPF---EHCHVVTTTTHKTLRGCRA-GM  265 (483)
T ss_dssp             --CSEEEE-CCSSCC-SCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGG---GTCSEEEEESSGGGCCCSC-EE
T ss_pred             --CcEEEE-eCCcCC-CcCCHHHHHHHHHHcCCEEEEEccchhcccccCCCCCCC---CCCcEEEecCcccCCCCCc-eE
Confidence              336777 666666 889999999999999999999999976654432222212   2689999999999988887 99


Q ss_pred             EEeeCchhhhhhh-cCCcccccCccCCCCCcccccCCCc-ccccCCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHH
Q 037144          312 LWVKDPSCLLSTL-STNPQYLKNEATDQEPKEQEVGYKD-WQITLCRRF-RSLKLWVVIRNFGVANLRNFIRSHVGMAKL  388 (502)
Q Consensus       312 ~~~r~~~~l~~~~-~~~~~yl~~~~~~~~~~~~~~~~~~-~~~~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~la~~  388 (502)
                      +++++........ .....|-..         ..++... ...+++... ...++..+++.....+++++.++..+++++
T Consensus       266 i~~~~~~~~~~~~~g~~~~y~~~---------~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~~~~~~~~~~~~~~~~~~  336 (483)
T 1rv3_A          266 IFYRRGVRSVDPKTGKEILYNLE---------SLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANCRA  336 (483)
T ss_dssp             EEEECSBCC-------CCBCCHH---------HHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHH
T ss_pred             EEEcchhhhhccccCcchhhHHH---------HHhhhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHH
Confidence            9988652100000 000000000         0000000 000111111 123445566666667889999999999999


Q ss_pred             HHHHHhcCCCeEEecCCC-eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEE---
Q 037144          389 FERLVTSDKRFEVAFPRN-FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMT---  464 (502)
Q Consensus       389 l~~~l~~~~~~~l~~~~~-~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~---  464 (502)
                      +.+.|.+. |++++.+.. ...+.+.+.+.+.                         +  ...+.+.|.+.|+.+..   
T Consensus       337 l~~~L~~~-g~~~~~~~~~~~~~~v~~~~~g~-------------------------~--~~~~~~~L~~~gI~v~~~~~  388 (483)
T 1rv3_A          337 LSAALVEL-GYKIVTGGSDNHLILVDLRSKGT-------------------------D--GGRAEKVLEACSIACNKNTC  388 (483)
T ss_dssp             HHHHHHHT-TCEEGGGSCSSSEEEEEGGGGTC-------------------------C--HHHHHHHHHHTTEECEEECC
T ss_pred             HHHHHHhc-CCEeccCCCCCceEEEeccCCCC-------------------------C--HHHHHHHHHhCCcEEecCCC
Confidence            99999998 899875432 2234444432211                         0  12345555556754331   


Q ss_pred             eee--ECCEEEEEEEecCCCCc----HHHHHHHHHHHHHHHH
Q 037144          465 HAI--VGGIYVLRFAAGNSMTM----ESHVRAAWTVVQEHLE  500 (502)
Q Consensus       465 ~~~--~~g~~~lR~~~~~~~t~----~~di~~~~~~l~~~~~  500 (502)
                      +..  ..+..++|+++.. .++    ++|++++++.|.++.+
T Consensus       389 pg~~~~~~~~~iRis~~~-~~t~g~~~edi~~~~~~l~~~l~  429 (483)
T 1rv3_A          389 PGDKSALRPSGLRLGTPA-LTSRGLLEKDFQKVAHFIHRGIE  429 (483)
T ss_dssp             SSCSCTTSCCEEEEECHH-HHHTTCCHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCceEEeecCC-cccCCCCHHHHHHHHHHHHHHHH
Confidence            221  1135689999863 345    7899999999988754

>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0

Probab=99.91  E-value=1.9e-22  Score=202.86  Aligned_cols=310  Identities=12%  Similarity=0.068  Sum_probs=211.8

Q ss_pred             HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144           90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG  169 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~  169 (502)
                      +..+.+.+...+.. ...| ..+..    .++++++++++|.+.+       ..++|+|||+++..++.+...       
T Consensus        47 ~~~v~~a~~~~~~~-~~~y-~~~~~----~~lr~~la~~~~~~~~-------~v~~~~g~t~a~~~~~~~~~~-------  106 (363)
T 3ffh_A           47 SKKVAAIQANSSVE-TEIY-PDGWA----SSLRKEVADFYQLEEE-------ELIFTAGVDELIELLTRVLLD-------  106 (363)
T ss_dssp             CHHHHHHHHTCBSC-CCBC-----C----HHHHHHHHHHHTCCGG-------GEEEESSHHHHHHHHHHHHCS-------
T ss_pred             CHHHHHHHHHHHHH-hhcC-CCcch----HHHHHHHHHHhCCChh-------hEEEeCCHHHHHHHHHHHHcc-------
Confidence            44455666655532 2223 22333    3455667788887654       689999999999887776532       


Q ss_pred             ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144          170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV  249 (502)
Q Consensus       170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i  249 (502)
                          +++.|+++..+|.++...++..|.   +++.+|.++  ++.+|+++|+++++++      +.+|+++.++|++|.+
T Consensus       107 ----~gd~vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~------~~~v~~~~p~nptG~~  171 (363)
T 3ffh_A          107 ----TTTNTVMATPTFVQYRQNALIEGA---EVREIPLLQ--DGEHDLEGMLNAIDEK------TTIVWICNPNNPTGNY  171 (363)
T ss_dssp             ----TTCEEEEEESSCHHHHHHHHHHTC---EEEEEECCT--TSCCCHHHHHHHCCTT------EEEEEEESSCTTTCCC
T ss_pred             ----CCCEEEEcCCChHHHHHHHHHcCC---EEEEecCCC--CCCcCHHHHHHhcccC------CCEEEEeCCCCCcCCC
Confidence                567888888999999999999999   999999985  4699999999998653      3478889999999999


Q ss_pred             CChhHHHHHHHHh--CCEEEeecccccccccCccchhhhc--CCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhhh
Q 037144          250 DPLKPLCDVAKQF--GIWVHVDAAYAGSACICPEFRHFID--GVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTL  324 (502)
Q Consensus       250 dpl~eI~~i~~~~--g~~lhVDaA~g~~~~~~~~~~~~~~--~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~  324 (502)
                      -|+++|.++|+.+  |+++|+|++|+.+.. . .......  ....-+.+..+++|+++ ....+|++++ ++.......
T Consensus       172 ~~~~~l~~l~~~~~~~~~li~De~~~~~~~-~-~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~-~~~~~~~l~  248 (363)
T 3ffh_A          172 IELADIQAFLDRVPSDVLVVLDEAYIEYVT-P-QPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIA-DKEIIRQLN  248 (363)
T ss_dssp             CCHHHHHHHHTTSCTTSEEEEECTTGGGCS-S-CCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEE-CHHHHHHHH
T ss_pred             cCHHHHHHHHHhCCCCcEEEEeCchHhhcC-c-cccCHHHHhhcCCCEEEEeechhhhcCchhceeeeec-CHHHHHHHH
Confidence            9999999999988  999999999986554 1 1111111  11123366778999997 4445688877 443332211


Q ss_pred             cCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q 037144          325 STNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF-GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAF  403 (502)
Q Consensus       325 ~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~  403 (502)
                      .....|                          ....+..+++...+ ..+++++..++..++++++.+.|++++++++. 
T Consensus       249 ~~~~~~--------------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~-  301 (363)
T 3ffh_A          249 IVRPPF--------------------------NTTSIGQKLAIEAIKDQAFIGECRTSNANGIKQYEAFAKRFEKVKLY-  301 (363)
T ss_dssp             HTCCSC--------------------------CCBHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEC-
T ss_pred             HhCCCC--------------------------CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhhCCCceEC-
Confidence            111000                          01233333333333 23677888899999999999999997799886 


Q ss_pred             CCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCC
Q 037144          404 PRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMT  483 (502)
Q Consensus       404 ~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t  483 (502)
                      ++..+++++.+...                              ..++.+.|.++|..+.++..+....++|++++    
T Consensus       302 ~~~~~~~~~~~~~~------------------------------~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~----  347 (363)
T 3ffh_A          302 PANGNFVLIDLGIE------------------------------AGTIFSYLEKNGYITRSGAALGFPTAVRITIG----  347 (363)
T ss_dssp             CCCSSEEEEECSSC------------------------------HHHHHHHHHHTTEECEETTTTTCTTEEEEECC----
T ss_pred             CCCCeEEEEECCCC------------------------------HHHHHHHHHHCCeEEEeCccCCCCCeEEEECC----
Confidence            55566666665421                              24567777777865444333333569999975    


Q ss_pred             cHHHHHHHHHHHHHH
Q 037144          484 MESHVRAAWTVVQEH  498 (502)
Q Consensus       484 ~~~di~~~~~~l~~~  498 (502)
                      +++|+++++++|+++
T Consensus       348 ~~~~i~~~~~~l~~~  362 (363)
T 3ffh_A          348 KEEDNSAVIALLEKL  362 (363)
T ss_dssp             CHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHh
Confidence            677999999999875

>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A

Probab=99.91  E-value=1.5e-22  Score=207.22  Aligned_cols=294  Identities=10%  Similarity=0.073  Sum_probs=199.2

Q ss_pred             HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144          116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV  195 (502)
Q Consensus       116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~  195 (502)
                      +...++.+++++++|.+.         .+++++|+++|..++.+...           +++.|+++...|.++..+++..
T Consensus       104 ~~~~~l~~~la~~~g~~~---------~i~~~sGt~a~~~~l~~~~~-----------~gd~Vl~~~~~~~~~~~~~~~~  163 (409)
T 3kki_A          104 YDKPMIEKRLAKFTGFDE---------CLLSQSGWNANVGLLQTICQ-----------PNTNVYIDFFAHMSLWEGARYA  163 (409)
T ss_dssp             TTSCHHHHHHHHHHTCSE---------EEEESCHHHHHHHHHHHHCC-----------TTCEEEEETTSCHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhCCCe---------EEEecchHHHHHHHHHHhcC-----------CCCEEEECCCcCHHHHHHHHHc
Confidence            344456677888888763         46667778999887776543           6788999999999999999999


Q ss_pred             CCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccc
Q 037144          196 GIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGS  275 (502)
Q Consensus       196 Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~  275 (502)
                      |.   +++.++.       +|+++|+++|++..     +.+|+++.+++++|.+.|+++|.++|++||+|+++|++|+++
T Consensus       164 g~---~~~~~~~-------~d~~~le~~l~~~~-----~~~vi~~~~~nptG~~~~l~~l~~la~~~~~~li~De~~~~g  228 (409)
T 3kki_A          164 NA---QAHPFMH-------NNCDHLRMLIQRHG-----PGIIVVDSIYSTLGTIAPLAELVNISKEFGCALLVDESHSLG  228 (409)
T ss_dssp             TC---EEEEECT-------TCHHHHHHHHHHHC-----SCEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTT
T ss_pred             CC---eEEEecC-------CCHHHHHHHHHhcC-----CeEEEECCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCcccc
Confidence            98   8777653       58999999998642     248888999999999999999999999999999999999775


Q ss_pred             cccCc--cchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCccccc
Q 037144          276 ACICP--EFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQIT  353 (502)
Q Consensus       276 ~~~~~--~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~  353 (502)
                      .+...  ...........+|.++.++||+++.+  .|+++.++ ............+....                   
T Consensus       229 ~~g~~g~~~~~~~~~~~~~di~~~s~sK~~~~~--gg~v~~~~-~~~~~~~~~~~~~~~~~-------------------  286 (409)
T 3kki_A          229 THGPNGAGLLAELGLTREVHFMTASLAKTFAYR--AGAIWCNN-EVNRCVPFISYPAIFSS-------------------  286 (409)
T ss_dssp             TSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSS--CEEEEESS-SGGGTHHHHCHHHHHSB-------------------
T ss_pred             ccCCCCCcchhhcCCCCCCCEEEeecchhhCCC--ceEEEECH-HHHHHHHHhCcCccccC-------------------
Confidence            43211  01111111136889999999999866  36655543 32221111111121110                   


Q ss_pred             CCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCc
Q 037144          354 LCRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTY  432 (502)
Q Consensus       354 ~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~  432 (502)
                       +.. ....++.++++.+  +...++.++..++++++.+.|+++ ++++.  +..+++.+.+...               
T Consensus       287 -~~~~~~~aa~~aal~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~--~~~~~~~~~~~~~---------------  345 (409)
T 3kki_A          287 -TLLPYEAAGLETTLEII--ESADNRRQHLDRMARKLRIGLSQL-GLTIR--SESQIIGLETGDE---------------  345 (409)
T ss_dssp             -CCCHHHHHHHHHHHHHH--HHCHHHHHHHHHHHHHHHHHHHTT-TCCCC--CSSSEEEEEEESH---------------
T ss_pred             -CCcHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCccC--CCCCEEEEEeCCH---------------
Confidence             000 0112333344433  122577788899999999999988 67765  3456677766431               


Q ss_pred             ccccccchhHhhHHHHHHHHHHHHhcCcEEEEee---eECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          433 DQYRQFSEEERTNEFNRELLESINVSGKVFMTHA---IVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       433 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~---~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                                   ....++.++|.++|.++....   ...+..++|++++ ..+++++|++++++|+++.+.
T Consensus       346 -------------~~~~~~~~~L~~~Gv~v~~~~~~~~~~~~~~iRi~~~-~~~t~e~i~~~~~~l~~~l~~  403 (409)
T 3kki_A          346 -------------RNTEKVRDYLESNGVFGSVFCRPATSKNKNIIRLSLN-SDVNDEQIAKIIEVCSDAVNY  403 (409)
T ss_dssp             -------------HHHHHHHHHHHHTTEECEEECTTSSCTTCEEEEEECC-TTCCHHHHHHHHHHHHHHHHH
T ss_pred             -------------HHHHHHHHHHHHCCceEeeeCCCCcCCCCcEEEEEcc-CCCCHHHHHHHHHHHHHHHhc
Confidence                         123467778888886532221   1235689999986 456778999999999998764

>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}

Probab=99.91  E-value=2e-22  Score=201.84  Aligned_cols=314  Identities=9%  Similarity=0.028  Sum_probs=214.7

Q ss_pred             HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144           90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG  169 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~  169 (502)
                      +..+.+.+...+.. ...|. .+    ...++++++++++|.+.+       ..++|+||++++..++.+...       
T Consensus        31 ~~~v~~a~~~~~~~-~~~y~-~~----~~~~l~~~la~~~~~~~~-------~i~~~~g~~~a~~~~~~~l~~-------   90 (354)
T 3ly1_A           31 SPKAQAAARDAVVK-ANRYA-KN----EILMLGNKLAAHHQVEAP-------SILLTAGSSEGIRAAIEAYAS-------   90 (354)
T ss_dssp             CHHHHHHHHHTGGG-TTSCC-HH----HHHHHHHHHHHHTTSCGG-------GEEEESHHHHHHHHHHHHHCC-------
T ss_pred             CHHHHHHHHHHHhh-CcCCC-CC----chHHHHHHHHHHhCCChH-------HEEEeCChHHHHHHHHHHHhC-------
Confidence            34455555555542 22331 12    234667788888998654       589999999999887776532       


Q ss_pred             ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144          170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV  249 (502)
Q Consensus       170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i  249 (502)
                          +++.|+++..+|.++...++..|+   +++.+|.++  ++.+|+++|+++|++.    ..+.+|+++.++|++|.+
T Consensus        91 ----~gd~vl~~~~~~~~~~~~~~~~g~---~~~~~~~~~--~~~~d~~~l~~~l~~~----~~~~~v~l~~p~nptG~~  157 (354)
T 3ly1_A           91 ----LEAQLVIPELTYGDGEHFAKIAGM---KVTKVKMLD--NWAFDIEGLKAAVAAY----SGPSIVYLVNPNNPTGTI  157 (354)
T ss_dssp             ----TTCEEEEESSSCTHHHHHHHHTTC---EEEEECCCT--TSCCCHHHHHHHHHTC----SSCEEEEEESSCTTTCCC
T ss_pred             ----CCCeEEECCCCchHHHHHHHHcCC---EEEEecCCC--CCCCCHHHHHHHhccC----CCCCEEEEeCCCCCcCCC
Confidence                567888899999999999999999   999999975  4799999999999731    124478888999999999


Q ss_pred             CChhHHHHHHHH--hCCEEEeecccccccccCc--cchhhhcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhhh
Q 037144          250 DPLKPLCDVAKQ--FGIWVHVDAAYAGSACICP--EFRHFIDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTL  324 (502)
Q Consensus       250 dpl~eI~~i~~~--~g~~lhVDaA~g~~~~~~~--~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~  324 (502)
                      -|+++|.++++.  +|+++++|++|+.+.....  ............+.++.++||+++ .+.+.|+++. ++.... .+
T Consensus       158 ~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~-~~~~~~-~~  235 (354)
T 3ly1_A          158 TPADVIEPWIASKPANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVA-HPTVIA-LM  235 (354)
T ss_dssp             CCHHHHHHHHHTCCTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEEC-CHHHHH-HH
T ss_pred             cCHHHHHHHHHhCCCCeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeec-CHHHHH-HH
Confidence            999999888887  9999999999986554221  111111211134577889999997 4556788776 333322 22


Q ss_pred             cCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q 037144          325 STNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF-GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAF  403 (502)
Q Consensus       325 ~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~  403 (502)
                      .....+ .                        ....+..+++...+ ..+.+.++.++..++++++.+.|++. ++++. 
T Consensus       236 ~~~~~~-~------------------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~-  288 (354)
T 3ly1_A          236 GRYVAG-E------------------------KINFSGVDAALASMNDSAFITYSKKSNDVSRQILLKALEDL-KLPYL-  288 (354)
T ss_dssp             GGGTTC-S------------------------CCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH-TCCBC-
T ss_pred             HHhcCC-C------------------------CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeEC-
Confidence            111000 0                        01233344444443 23667888899999999999999887 77765 


Q ss_pred             CCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeE-CCEEEEEEEecCCC
Q 037144          404 PRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIV-GGIYVLRFAAGNSM  482 (502)
Q Consensus       404 ~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~-~g~~~lR~~~~~~~  482 (502)
                      ++..+++++.+...                              ..++.+.|.++|.. +. +.+ .+..++|++++   
T Consensus       289 ~~~~~~~~~~~~~~------------------------------~~~~~~~l~~~gi~-v~-g~~~~~~~~iRis~~---  333 (354)
T 3ly1_A          289 PSEGNFVFHQLVVP------------------------------LKDYQTHMADAGVL-IG-RAFPPADNWCRISLG---  333 (354)
T ss_dssp             CCCSSEEEEECSSC------------------------------HHHHHHHHHHTTEE-CC-CCCTTCTTEEEEECC---
T ss_pred             CCCceEEEEECCCC------------------------------HHHHHHHHHHCCEE-Ee-ecCCCCCCEEEEEcC---
Confidence            45556666655421                              24566777777864 33 333 34678999975   


Q ss_pred             CcHHHHHHHHHHHHHHHHh
Q 037144          483 TMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       483 t~~~di~~~~~~l~~~~~~  501 (502)
                       +++++++++++|+++.++
T Consensus       334 -~~~~i~~~~~~l~~~l~~  351 (354)
T 3ly1_A          334 -TPQEMQWVADTMREFRKK  351 (354)
T ss_dssp             -CHHHHHHHHHHHHHHHHT
T ss_pred             -CHHHHHHHHHHHHHHHHh
Confidence             567999999999998764

>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*

Probab=99.91  E-value=2.9e-23  Score=210.74  Aligned_cols=326  Identities=13%  Similarity=0.075  Sum_probs=216.5

Q ss_pred             HHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCc
Q 037144           91 GIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGR  170 (502)
Q Consensus        91 ~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~  170 (502)
                      ..+.+.+...+......|....+..++++.+.+|+...+|.+...     ...++|+||++++..++.+..+        
T Consensus        47 ~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~-----~~i~~t~g~~~al~~~~~~l~~--------  113 (385)
T 1b5p_A           47 EHVKEAARRALAQGKTKYAPPAGIPELREALAEKFRRENGLSVTP-----EETIVTVGGSQALFNLFQAILD--------  113 (385)
T ss_dssp             HHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHTTCCCCCG-----GGEEEESHHHHHHHHHHHHHCC--------
T ss_pred             HHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCh-----HHEEEcCChHHHHHHHHHHhcC--------
Confidence            344455444443323345555567889999999999988864221     2689999999999887766532        


Q ss_pred             cCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC
Q 037144          171 ENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD  250 (502)
Q Consensus       171 ~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id  250 (502)
                         +++.|+++..+|.++...++..|.   +++.+|+++++++.+|+++|++++++.      +.+|+++.++|+||.+-
T Consensus       114 ---~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~NPtG~~~  181 (385)
T 1b5p_A          114 ---PGDEVIVLSPYWVSYPEMVRFAGG---VVVEVETLPEEGFVPDPERVRRAITPR------TKALVVNSPNNPTGAVY  181 (385)
T ss_dssp             ---TTCEEEEEESCCTHHHHHHHHTTC---EEEEEECCGGGTTCCCHHHHHTTCCTT------EEEEEEESSCTTTCCCC
T ss_pred             ---CCCEEEEcCCCchhHHHHHHHcCC---EEEEeecCcccCCCCCHHHHHHhcCCC------CEEEEEeCCCCCCCCCc
Confidence               577888888999999999999999   999999975335789999999988643      34778889999999985


Q ss_pred             C---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCC-CCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhc
Q 037144          251 P---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE-CVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLS  325 (502)
Q Consensus       251 p---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~-~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~  325 (502)
                      |   +++|+++|++||+++++|++|+.+.... .... +..+. ..+.+..+++|+++.| ...|+++.++ .... .+.
T Consensus       182 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~-~~~~~~~~~i~~~s~SK~~~~~G~RiG~~~~~~-~~~~-~l~  257 (385)
T 1b5p_A          182 PKEVLEALARLAVEHDFYLVSDEIYEHLLYEG-EHFS-PGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPK-EVIK-AMA  257 (385)
T ss_dssp             CHHHHHHHHHHHHHTTCEEEEECTTTTCBSSS-CCCC-GGGTCTTTEEEEEESTTTTTCGGGCCEEEECCH-HHHH-HHH
T ss_pred             CHHHHHHHHHHHHHcCCEEEEEccchhcccCC-CCCC-HHHcCCCCEEEEEechhhcCCcccceEEEEeCH-HHHH-HHH
Confidence            5   9999999999999999999998754421 1111 11111 3456778899999754 3478887743 3322 221


Q ss_pred             CCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh-----cHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 037144          326 TNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF-----GVANLRNFIRSHVGMAKLFERLVTSDKRFE  400 (502)
Q Consensus       326 ~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-----g~~g~~~~~~~~~~la~~l~~~l~~~~~~~  400 (502)
                      ....+...                       ....+..+++...+     +.+.+++..+++.++++++.+.|+++ +++
T Consensus       258 ~~~~~~~~-----------------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~  313 (385)
T 1b5p_A          258 SVSRQSTT-----------------------SPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTAL-GLK  313 (385)
T ss_dssp             HHHHTTTC-----------------------SCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCC
T ss_pred             HHHhhccC-----------------------CCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHC-CCe
Confidence            10000000                       01223333333333     35567788888999999999999887 787


Q ss_pred             EecCCCeeEEEE-EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEec
Q 037144          401 VAFPRNFSLVCF-RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAG  479 (502)
Q Consensus       401 l~~~~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~  479 (502)
                      +. ++..+.+.| .+...+.                         +  ..++.+.|.+.|..+.++..+....++|++++
T Consensus       314 ~~-~~~~~~~~~~~~~~~~~-------------------------~--~~~l~~~l~~~gv~v~~g~~f~~~~~iRis~~  365 (385)
T 1b5p_A          314 AV-RPSGAFYVLMDTSPIAP-------------------------D--EVRAAERLLEAGVAVVPGTDFAAFGHVRLSYA  365 (385)
T ss_dssp             BC-CCSBTTEEEEECTTTCS-------------------------S--HHHHHHHHHHTTEECEESGGGTCTTEEEEECC
T ss_pred             ec-CCCeeEEEEEecCCCCC-------------------------C--HHHHHHHHHHCCeEEecccccCCCCeEEEEec
Confidence            65 444443333 3321110                         0  24566777767865544433332468999986


Q ss_pred             CCCCcHHHHHHHHHHHHHHHH
Q 037144          480 NSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       480 ~~~t~~~di~~~~~~l~~~~~  500 (502)
                         +++++|+++++.|.++.+
T Consensus       366 ---~~~~~i~~~l~~l~~~l~  383 (385)
T 1b5p_A          366 ---TSEENLRKALERFARVLG  383 (385)
T ss_dssp             ---SCHHHHHHHHHHGGGGC-
T ss_pred             ---CCHHHHHHHHHHHHHHHh
Confidence               577799999998877654

>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*

Probab=99.91  E-value=1.3e-24  Score=219.39  Aligned_cols=307  Identities=11%  Similarity=0.015  Sum_probs=196.7

Q ss_pred             ChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEE-cCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhH-
Q 037144          111 SPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVI-QGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAF-  188 (502)
Q Consensus       111 ~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~-t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~-  188 (502)
                      ++.+.++-.++++.+++++|.++..      ..+| |+|||+++.+++.....           +++.+++...+|++. 
T Consensus        67 ~~~~~~~~~~ar~~la~ll~~~~~~------evif~t~~~T~a~n~ai~~l~~-----------~gd~v~~~~~~~~~~~  129 (386)
T 3qm2_A           67 GKEFIQVAEEAEQDFRDLLNIPSNY------KVLFCHGGGRGQFAGVPLNLLG-----------DKTTADYVDAGYWAAS  129 (386)
T ss_dssp             ------CCHHHHHHHHHHHTCCTTE------EEEEEESCTTHHHHHHHHHHCT-----------TCCEEEEEESSHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHhCCCCCc------eEEEEcCCchHHHHHHHHhccC-----------CCCeEEEEeCCHHHHH
Confidence            4556677778999999999997532      5787 79999999877665422           334443333355542 


Q ss_pred             -HHHHHHcCCCCCCEEEEecC--CCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc-CChhHHHHHHHHhCC
Q 037144          189 -QKAAQIVGIDRKNIRAIKTT--KSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV-DPLKPLCDVAKQFGI  264 (502)
Q Consensus       189 -~~aa~~~Glg~~~v~~v~~~--~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i-dpl~eI~~i~~~~g~  264 (502)
                       .+.++..  |  .+..+|++  ..+ ..+++++++++|+++++      +|++++.+|.+|.+ +||++|+     +|+
T Consensus       130 ~~~~a~~~--G--~v~~v~~~~~~~G-~~~~~~~~~~~l~~~t~------lV~~~h~et~tG~~i~pi~~i~-----~g~  193 (386)
T 3qm2_A          130 AIKEAKKY--C--APQIIDAKITVDG-KRAVKPMREWQLSDNAA------YLHYCPNETIDGIAIDETPDFG-----PEV  193 (386)
T ss_dssp             HHHHHTTT--S--EEEEEECEEEETT-EEEECCGGGCCCCTTCS------CEEECSEETTTTEECCCCCCCC-----TTC
T ss_pred             HHHHHHHh--C--CeEEEecCcccCC-CCCCchHHHhhcCCCCc------EEEEECCcCCcCEecCchhhhc-----CCC
Confidence             2233333  3  58889987  322 13788888877765543      78899999999995 9999996     799


Q ss_pred             EEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccc
Q 037144          265 WVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQE  344 (502)
Q Consensus       265 ~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~  344 (502)
                      ++|||++++.+..+++-.        ..|.+++++|||++ |.|+|++++|+... .......+.++......    +. 
T Consensus       194 ~~~vDa~qs~g~~pidv~--------~~~~~~~s~hK~lG-P~G~g~l~v~~~~~-~~~~~~~p~~~~~~~~~----~~-  258 (386)
T 3qm2_A          194 VVTADFSSTILSAPLDVS--------RYGVIYAGAQKNIG-PAGLTLVIVREDLL-GKAHESCPSILDYTVLN----DN-  258 (386)
T ss_dssp             CEEEECTTTTTSSCCCGG--------GCSEEEEETTTTTC-CTTEEEEEEEGGGC-SCCCTTSCGGGCHHHHH----HC-
T ss_pred             EEEEEcccccCCCCCCcc--------ccCEEEEecccccC-CCccEEEEECHHHH-hhhcccCCcHHHHHHHh----hc-
Confidence            999999999888877632        34567899999995 99999999987642 11111112222100000    00 


Q ss_pred             cCCCcccccCCCCCCchHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHhcCCCe-EEecCC--Ce-eEEEEEeecCcc
Q 037144          345 VGYKDWQITLCRRFRSLKLWVVIRNFGVA-NLRNFIRSHVGMAKLFERLVTSDKRF-EVAFPR--NF-SLVCFRVTPSAV  419 (502)
Q Consensus       345 ~~~~~~~~~~sr~~~al~~~~~l~~~g~~-g~~~~~~~~~~la~~l~~~l~~~~~~-~l~~~~--~~-~~v~f~~~~~~~  419 (502)
                       .   ....+..-+....+..+++.+-.+ |++++.++..++++++++.|+++ ++ ....++  .+ .+++|.++..+.
T Consensus       259 -~---~~~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~~~l~~~-~~~~~~~~~~~rs~~iv~f~~~~~~~  333 (386)
T 3qm2_A          259 -D---SMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNS-DFYRNDVAQANRSRMNVPFQLADNTL  333 (386)
T ss_dssp             -----------CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTC-SSEECCBCGGGBCSSEEEEEESSGGG
T ss_pred             -C---CCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCHHHcCceEEEEECCCccc
Confidence             0   000000012335666778877777 89999999999999999999998 55 332222  33 478898864211


Q ss_pred             hhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144          420 MDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHL  499 (502)
Q Consensus       420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~  499 (502)
                                                  ...+...|.+.|.+...+  ....+.+|+|+.++ ++++|||++++.|+++.
T Consensus       334 ----------------------------~~~~~~~L~~~gI~~~~g--~~~~~~iRiS~~~~-~t~edId~l~~~l~~~~  382 (386)
T 3qm2_A          334 ----------------------------DKVFLEESFAAGLHALKG--HRVVGGMRASIYNA-MPIEGVKALTDFMIDFE  382 (386)
T ss_dssp             ----------------------------HHHHHHHHHHTTEECCBC--CTTTCSEEEECCTT-SCHHHHHHHHHHHHHHH
T ss_pred             ----------------------------cHHHHHHHHHCCCEEeCC--CCCcCeEEEEcCCC-CCHHHHHHHHHHHHHHH
Confidence                                        124555566778643222  12123499998654 67779999999999987


Q ss_pred             Hh
Q 037144          500 EA  501 (502)
Q Consensus       500 ~~  501 (502)
                      ++
T Consensus       383 ~~  384 (386)
T 3qm2_A          383 RR  384 (386)
T ss_dssp             HH
T ss_pred             Hh
Confidence            64

>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}

Probab=99.91  E-value=1.4e-22  Score=212.79  Aligned_cols=334  Identities=10%  Similarity=0.049  Sum_probs=219.4

Q ss_pred             CCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCC
Q 037144          104 VGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQ  183 (502)
Q Consensus       104 ~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~  183 (502)
                      ....|..+++..++++++.+|+.+..|.+...     ...++|+|+++++..++.+....          +++.|+++..
T Consensus       126 ~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~-----~~i~~t~G~~~al~~~~~~l~~~----------~gd~Vlv~~p  190 (500)
T 3tcm_A          126 ATGAYSHSQGIHGLRDAIASGIASRDGFPANA-----DDIFLTDGASPGVHLMMQLLIRN----------EKDGILVPIP  190 (500)
T ss_dssp             CSSSCCCTTCCHHHHHHHHHHHHHHHSSCCCG-----GGEEEESSSHHHHHHHHHHHCCS----------TTEEEEEEES
T ss_pred             cCCCcCCCcChHHHHHHHHHHHHhhcCCCCCc-----ccEEEcCCHHHHHHHHHHHHcCC----------CCCEEEEeCC
Confidence            34567777888999999999999998865321     26899999999998777665311          6788999999


Q ss_pred             CchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC---ChhHHHHHHH
Q 037144          184 THCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD---PLKPLCDVAK  260 (502)
Q Consensus       184 ~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id---pl~eI~~i~~  260 (502)
                      .|.++..+++..|.   +++.+++++++++.+|+++|+++|++..+++..+.+|+++.++|+||.+-   ++++|+++|+
T Consensus       191 ~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~  267 (500)
T 3tcm_A          191 QYPLYSASIALHGG---ALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCK  267 (500)
T ss_dssp             CCTHHHHHHHHTTC---EEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHH
T ss_pred             CcHhHHHHHHHcCC---EEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHH
Confidence            99999999999999   99999998766689999999999998766666677888889999999994   4777788899


Q ss_pred             HhCCEEEeecccccccccCc----cchhhhcCC----CCCCee-EEccCCcC-C-CCCcceEEEee--CchhhhhhhcCC
Q 037144          261 QFGIWVHVDAAYAGSACICP----EFRHFIDGV----ECVDSF-SFNPHKWL-F-TTLDCCCLWVK--DPSCLLSTLSTN  327 (502)
Q Consensus       261 ~~g~~lhVDaA~g~~~~~~~----~~~~~~~~~----~~aDsi-~~~~hK~l-~-~p~~~g~~~~r--~~~~l~~~~~~~  327 (502)
                      +||+++++|.+|+.+.+...    ........+    ...+.+ ..+++|.+ + ....+|++++.  ++..........
T Consensus       268 ~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~  347 (500)
T 3tcm_A          268 NEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPVREQIYKIA  347 (500)
T ss_dssp             HHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCCTTHHHHHHHHH
T ss_pred             HcCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCCHHHHHHHHHHH
Confidence            99999999999987654211    111111111    123334 44899998 3 23456777763  333322111100


Q ss_pred             cccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc------------HHHHHHHHHHHHHHHHHHHHHHhc
Q 037144          328 PQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG------------VANLRNFIRSHVGMAKLFERLVTS  395 (502)
Q Consensus       328 ~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g------------~~g~~~~~~~~~~la~~l~~~l~~  395 (502)
                      ..+.                      ++   ..+..+++...+.            .+...++.+++.++++++.+.|++
T Consensus       348 ~~~~----------------------~~---~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~  402 (500)
T 3tcm_A          348 SVNL----------------------CS---NITGQILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNK  402 (500)
T ss_dssp             HTTC----------------------CC---CHHHHHHHHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hccc----------------------CC---CHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            0000                      00   1122222222221            234566778888999999999999


Q ss_pred             CCCeEEecCCCeeEEEEE-eecCc-chhhhhhcccCCCcccccccchhHhhHHHHHHH-HHHHHhcCcEEEEeeeE---C
Q 037144          396 DKRFEVAFPRNFSLVCFR-VTPSA-VMDKLRTKYKNGTYDQYRQFSEEERTNEFNREL-LESINVSGKVFMTHAIV---G  469 (502)
Q Consensus       396 ~~~~~l~~~~~~~~v~f~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~l~~~g~~~~~~~~~---~  469 (502)
                      +||+++. +++.++++|. +..+. ....                ........ ...+ .+.+.+.|.++.++..+   .
T Consensus       403 ~~g~~~~-~~~g~~~~~~~~~lp~~~~~~----------------~~~~g~~~-~~~~~~~ll~~~gI~v~pg~~f~~~~  464 (500)
T 3tcm_A          403 LEGITCN-EAEGAMYVFPQICLPQKAIEA----------------AKAANKAP-DAFYALRLLESTGIVVVPGSGFGQVP  464 (500)
T ss_dssp             STTEECC-CCCBTTEECCEECCCHHHHHH----------------HHHHTSCH-HHHHHHHHHHHHCEECEESTTTCCCT
T ss_pred             CCCcEEe-cCCeEEEEeeeecCchhhHHH----------------HHhcCCCc-HHHHHHHHHHHCCEEEEeCcccCCCC
Confidence            9999986 5666666653 22110 0000                00000000 1122 24444568765544332   3


Q ss_pred             CEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          470 GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       470 g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      +..++|++++   .++++|++++++|.++.++
T Consensus       465 g~~~iRis~~---~~~e~i~~~i~~l~~~~~~  493 (500)
T 3tcm_A          465 GTWHFRCTIL---PQEDKIPAVISRFTVFHEA  493 (500)
T ss_dssp             TCCBEEEESC---SCTTTHHHHHHHHHHHHHH
T ss_pred             CCCEEEEEEC---CCHHHHHHHHHHHHHHHHH
Confidence            4668999987   4566899999999887654

>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*

Probab=99.91  E-value=2e-22  Score=208.84  Aligned_cols=335  Identities=12%  Similarity=0.067  Sum_probs=221.3

Q ss_pred             HHHHHHHHHHhhcCCC---CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHH
Q 037144           89 VAGIVGEMLSSGFNVV---GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVL  165 (502)
Q Consensus        89 ~~~~~~~~l~~~~n~~---~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~  165 (502)
                      ++..+.+.+...+...   ...|....+..++++.+.+++.+.+|.+ ..     ...++|+|+++++..++.+..+   
T Consensus        92 p~~~v~~a~~~~l~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~-~~-----~~v~~t~G~~~al~~~~~~l~~---  162 (448)
T 3aow_A           92 PKEIIRDILVEIMEKYADKALQYGTTKGFTPLRETLMKWLGKRYGIS-QD-----NDIMITSGSQQALDLIGRVFLN---  162 (448)
T ss_dssp             CHHHHHHHHHHHHHHSHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCC-TT-----SEEEEESSHHHHHHHHHHHHCC---
T ss_pred             CHHHHHHHHHHHHHhhhHHHhCCCCCCCcHHHHHHHHHHHHHhcCcC-Ch-----hhEEEeCcHHHHHHHHHHHHcC---
Confidence            3455555555555332   2345555667889999999998888984 21     2689999999999887776543   


Q ss_pred             HHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEE-EEecCCc
Q 037144          166 KKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFL-CATVGTT  244 (502)
Q Consensus       166 ~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~V-v~t~gtt  244 (502)
                              +++.|++...+|.++..+++..|.   +++.+|+++  + .+|+++|+++|+.....+.++.+| +.+.++|
T Consensus       163 --------~Gd~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~--~-g~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~N  228 (448)
T 3aow_A          163 --------PGDIVVVEAPTYLAALQAFNFYEP---QYIQIPLDD--E-GMKVEILEEKLKELKSQGKKVKVVYTVPTFQN  228 (448)
T ss_dssp             --------TTCEEEEEESCCHHHHHHHHTTCC---EEEEEEEET--T-EECHHHHHHHHHHHHHTTCCEEEEEECCSSCT
T ss_pred             --------CCCEEEEeCCChHHHHHHHHHcCC---EEEEeccCC--C-CCCHHHHHHHHhhhhccCCCCeEEEECCCCCC
Confidence                    567888899999999999999999   999999975  2 399999999997322122235565 5678899


Q ss_pred             cccccCC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhc-CCCCCCeeEEccCCcCCCCCcceEEEeeCchhh
Q 037144          245 AITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFID-GVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCL  320 (502)
Q Consensus       245 ~~G~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~-~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l  320 (502)
                      ++|.+-|   +++|+++|++||+++++|++|+.+.+.......... ...+.+.+..+++|+++....+|+++.+ +...
T Consensus       229 PtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~~~~~~~~vi~~~S~SK~~~~GlriG~v~~~-~~l~  307 (448)
T 3aow_A          229 PAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILAPGFRIGWMVGD-PGII  307 (448)
T ss_dssp             TTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTGGGCTTSCEEEEEESTTTTCGGGCCEEEEEC-HHHH
T ss_pred             CcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHhcCCCCCEEEEccchhhccccccEEEEEeC-HHHH
Confidence            9999866   579999999999999999999876542211111100 1123456778899999833457888876 3332


Q ss_pred             hhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--c--HHHHHHHHHHHHHHHHHHHHHHhc-
Q 037144          321 LSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--G--VANLRNFIRSHVGMAKLFERLVTS-  395 (502)
Q Consensus       321 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g--~~g~~~~~~~~~~la~~l~~~l~~-  395 (502)
                      . .+.......                   +. ++   ..+..+++...+  +  .+.+.++.+++.++++++.+.|++ 
T Consensus       308 ~-~l~~~~~~~-------------------~~-~~---~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  363 (448)
T 3aow_A          308 R-KMEIAKQST-------------------DL-CT---NVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEF  363 (448)
T ss_dssp             H-HHHHHHHHH-------------------HS-SC---CHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             H-HHHHHHHHh-------------------cC-CC---CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            2 221110000                   00 00   223333333333  2  345677778888999999999987 


Q ss_pred             CC-CeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeE----CC
Q 037144          396 DK-RFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIV----GG  470 (502)
Q Consensus       396 ~~-~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~----~g  470 (502)
                      +| ++++..+....++++.++. ..                         +  ..++.+++.++|..+.++..+    .+
T Consensus       364 ~~~g~~~~~p~~g~~~~v~~~~-~~-------------------------~--~~~l~~~l~~~gV~v~pg~~f~~~~~~  415 (448)
T 3aow_A          364 MPEGVKWTKPEGGMFIWVTLPD-GI-------------------------D--SKKMLERAIKKGVAYVPGEAFYAHRDV  415 (448)
T ss_dssp             CCTTCEECCCSBSSEEEEECST-TC-------------------------C--HHHHHHHHHHTTEECEEGGGGSTTCCC
T ss_pred             CCCCeEEeCCCccEEEEEEcCC-CC-------------------------C--HHHHHHHHHHCCcEEEcchhhcCCCCC
Confidence            57 6887644334455555532 11                         0  245677777788765554333    24


Q ss_pred             EEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          471 IYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       471 ~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      ..++|++++..  ++++|+++++.|.++.++
T Consensus       416 ~~~iRls~~~~--~~e~i~~~~~~L~~~l~~  444 (448)
T 3aow_A          416 KNTMRLNFTYV--DEDKIMEGIKRLAETIKE  444 (448)
T ss_dssp             CSEEEEECSSS--CTHHHHHHHHHHHHHHHH
T ss_pred             CCEEEEEeCCC--CHHHHHHHHHHHHHHHHH
Confidence            57899998643  567999999999987754

>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}

Probab=99.91  E-value=5.7e-23  Score=207.54  Aligned_cols=323  Identities=12%  Similarity=0.042  Sum_probs=216.2

Q ss_pred             HHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCc
Q 037144           91 GIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGR  170 (502)
Q Consensus        91 ~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~  170 (502)
                      ..+.+.+...+......|.. .. .++++.+.+++.+.+|.+...     ...++|+||++|+..++.+...        
T Consensus        39 ~~v~~a~~~~~~~~~~~y~~-~~-~~lr~~la~~~~~~~~~~~~~-----~~i~~t~g~~~a~~~~~~~~~~--------  103 (377)
T 3fdb_A           39 PAVLQAITDAVQREAFGYQP-DG-SLLSQATAEFYADRYGYQARP-----EWIFPIPDVVRGLYIAIDHFTP--------  103 (377)
T ss_dssp             HHHHHHHHHHHHTTCCSSCC-SS-CCHHHHHHHHHHHHHCCCCCG-----GGEEEESCHHHHHHHHHHHHSC--------
T ss_pred             HHHHHHHHHHHHcCCCCCCC-CC-HHHHHHHHHHHHHHhCCCCCH-----HHEEEeCChHHHHHHHHHHhcC--------
Confidence            34555555555433334544 33 678999999999988865321     2689999999999887776532        


Q ss_pred             cCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC
Q 037144          171 ENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD  250 (502)
Q Consensus       171 ~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id  250 (502)
                         +++.|+++..+|.++...++..|.   +++.+|+++  +  +|+++|++++++.+      .+|+++.++|++|.+-
T Consensus       104 ---~gd~vl~~~~~~~~~~~~~~~~g~---~~~~~~~~~--~--~d~~~l~~~l~~~~------~~v~i~~p~nptG~~~  167 (377)
T 3fdb_A          104 ---AQSKVIVPTPAYPPFFHLLSATQR---EGIFIDATG--G--INLHDVEKGFQAGA------RSILLCNPYNPLGMVF  167 (377)
T ss_dssp             ---TTCCEEEEESCCTHHHHHHHHHTC---CEEEEECTT--S--CCHHHHHHHHHTTC------CEEEEESSBTTTTBCC
T ss_pred             ---CCCEEEEcCCCcHhHHHHHHHcCC---EEEEccCCC--C--CCHHHHHHHhccCC------CEEEEeCCCCCCCCCC
Confidence               566788888999999999999999   999999985  2  99999999997643      3788888999999996


Q ss_pred             C---hhHHHHHHHHhCCEEEeecccccccccC-ccchhhhcCC--CCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhh
Q 037144          251 P---LKPLCDVAKQFGIWVHVDAAYAGSACIC-PEFRHFIDGV--ECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLST  323 (502)
Q Consensus       251 p---l~eI~~i~~~~g~~lhVDaA~g~~~~~~-~~~~~~~~~~--~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~  323 (502)
                      |   +++|+++|++||+++++|++|+.+.... ..... +..+  ...+.+..+++|+++ .....|++++.++.... .
T Consensus       168 ~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~-~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~-~  245 (377)
T 3fdb_A          168 APEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAA-GVSDTAASVCITITAPSKAWNIAGLKCAQIIFSNPSDAE-H  245 (377)
T ss_dssp             CHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGG-GSCHHHHHHEEEEECSTTTTTCGGGCCEEEECCSHHHHH-H
T ss_pred             CHHHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCccc-HHHccCCCcEEEEEeChHhccCcchhheEEEeCCHHHHH-H
Confidence            4   6677778999999999999998755432 11111 1111  123367788999996 44567877776654432 2


Q ss_pred             hcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhc-CCCeE
Q 037144          324 LSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTS-DKRFE  400 (502)
Q Consensus       324 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~-~~~~~  400 (502)
                      +.....+...                       ....+..+++...+  +.+.++++.++..++++++.+.|++ +|+++
T Consensus       246 ~~~~~~~~~~-----------------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~  302 (377)
T 3fdb_A          246 WQQLSPVIKD-----------------------GASTLGLIAAEAAYRYGTDFLNQEVAYLKNNHDFLLHEIPKRIPGAK  302 (377)
T ss_dssp             HHHSCHHHHC-----------------------CCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCE
T ss_pred             HHHHHHhhcC-----------------------CCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhhCCCce
Confidence            2111111100                       01223333333332  4567888999999999999999988 88999


Q ss_pred             EecCCCeeEEE-EEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcEEEEeeeEC--CEEEEEE
Q 037144          401 VAFPRNFSLVC-FRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKVFMTHAIVG--GIYVLRF  476 (502)
Q Consensus       401 l~~~~~~~~v~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~--g~~~lR~  476 (502)
                      +. ++..+++. +.+...+.                            ..++.+.+.++ |..+.++..+.  +..++|+
T Consensus       303 ~~-~~~~~~~~~~~~~~~~~----------------------------~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~Ri  353 (377)
T 3fdb_A          303 IT-PMQATYLMWIDFRDTTI----------------------------EGSPSEFFIEKAKVAMNDGAWFGEDGTGFCRL  353 (377)
T ss_dssp             EC-CCSBCSEEEEECTTSCC----------------------------CSCHHHHHHHHHCEECEEGGGGCGGGTTEEEE
T ss_pred             Ee-cCCeeEEEEEECcccCC----------------------------CHHHHHHHHHhCCEEecCChhccCCCCCEEEE
Confidence            87 44445553 44432111                            01344455544 76544333222  2578999


Q ss_pred             EecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          477 AAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       477 ~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      +++   +++++|+++++.|.++.++
T Consensus       354 s~~---~~~e~i~~~l~~l~~~l~~  375 (377)
T 3fdb_A          354 NFA---TSREVLEEAIDRMAKAVSH  375 (377)
T ss_dssp             ECC---SCHHHHHHHHHHHHHHHTT
T ss_pred             EeC---CCHHHHHHHHHHHHHHHhh
Confidence            987   3678999999999998765

>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}

Probab=99.91  E-value=2.8e-23  Score=209.52  Aligned_cols=316  Identities=12%  Similarity=0.078  Sum_probs=215.5

Q ss_pred             HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144           90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG  169 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~  169 (502)
                      +..+.+.+...+......|...++..++++.+.+|+.+.+|.+...     ...++|+||++++..++.+...       
T Consensus        44 ~~~v~~a~~~~~~~~~~~y~~~~~~~~l~~~la~~~~~~~g~~~~~-----~~v~~~~g~~~a~~~~~~~~~~-------  111 (370)
T 2z61_A           44 PKPIVDEGIKSLKEGKTHYTDSRGILELREKISELYKDKYKADIIP-----DNIIITGGSSLGLFFALSSIID-------  111 (370)
T ss_dssp             CHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHSSCCCCG-----GGEEEESSHHHHHHHHHHHHCC-------
T ss_pred             CHHHHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHHHHHhCCCCCh-----hhEEECCChHHHHHHHHHHhcC-------
Confidence            3445555555554333445555567899999999999988864321     2689999999999888776632       


Q ss_pred             ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144          170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV  249 (502)
Q Consensus       170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i  249 (502)
                          +++.|+++..+|.++..+++..|.   +++.+|        +|+++|+++++++      +.+|+++.++|++|.+
T Consensus       112 ----~gd~vl~~~p~~~~~~~~~~~~g~---~~~~v~--------~d~~~l~~~l~~~------~~~v~~~~p~nptG~~  170 (370)
T 2z61_A          112 ----DGDEVLIQNPCYPCYKNFIRFLGA---KPVFCD--------FTVESLEEALSDK------TKAIIINSPSNPLGEV  170 (370)
T ss_dssp             ----TTCEEEEESSCCTHHHHHHHHTTC---EEEEEC--------SSHHHHHHHCCSS------EEEEEEESSCTTTCCC
T ss_pred             ----CCCEEEEeCCCchhHHHHHHHcCC---EEEEeC--------CCHHHHHHhcccC------ceEEEEcCCCCCcCcc
Confidence                567888899999999999999999   888887        5889999988542      3467788899999999


Q ss_pred             CChhHHHHHHHHhCCEEEeecccccccccCc--cchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcC
Q 037144          250 DPLKPLCDVAKQFGIWVHVDAAYAGSACICP--EFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLST  326 (502)
Q Consensus       250 dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~--~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~  326 (502)
                      .|++ |.++|++||+++++|++|+.+.....  .... +.+....|.++.++||+++.| ..+|+++.++ ... +.+..
T Consensus       171 ~~~~-l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~-~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~-~~~-~~~~~  246 (370)
T 2z61_A          171 IDRE-IYEFAYENIPYIISDEIYNGLVYEGKCYSAIE-FDENLEKTILINGFSKLYAMTGWRIGYVISND-EII-EAILK  246 (370)
T ss_dssp             CCHH-HHHHHHHHCSEEEEECTTTTCBSSSCCCCGGG-TCTTCSSEEEEEESTTTTTCGGGCCEEEECCH-HHH-HHHHH
T ss_pred             cCHH-HHHHHHHcCCEEEEEcchhhcccCCCCcCHHH-ccCCCCcEEEEecChhccCCccceEEEEEECH-HHH-HHHHH
Confidence            9999 99999999999999999987654211  1111 112336788999999999633 3478887765 322 22211


Q ss_pred             CcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q 037144          327 NPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF---GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAF  403 (502)
Q Consensus       327 ~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~  403 (502)
                      .......                       ....+..+++...+   +.++++++.++..++++++.+.|+++ ++++..
T Consensus       247 ~~~~~~~-----------------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~  302 (370)
T 2z61_A          247 LQQNLFI-----------------------SAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDF-GWEVNN  302 (370)
T ss_dssp             HHHHHTS-----------------------SSCHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCBCCC
T ss_pred             HHhhccc-----------------------CCCHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHc-CCeecC
Confidence            0000000                       01223333333333   45667888889999999999999988 787753


Q ss_pred             CCCeeEEEE-EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeEC--CEEEEEEEec
Q 037144          404 PRNFSLVCF-RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVG--GIYVLRFAAG  479 (502)
Q Consensus       404 ~~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lR~~~~  479 (502)
                       +..+++.+ .+...                              ..++.+++. +.|..+..+..+.  +..++|++++
T Consensus       303 -~~~~~~~~~~~~~~------------------------------~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~Ri~~~  351 (370)
T 2z61_A          303 -PIGAYYVFPNIGED------------------------------GREFAYKLLKEKFVALTPGIGFGSKGKNYIRISYA  351 (370)
T ss_dssp             -CCBTTEECCBCSSC------------------------------HHHHHHHHHHHHCEECEEGGGGCGGGSSBEEEECC
T ss_pred             -CCcceEEEEecCCC------------------------------HHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEe
Confidence             44444333 33211                              235566665 5686544432222  3568999987


Q ss_pred             CCCCcHHHHHHHHHHHHHHHH
Q 037144          480 NSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       480 ~~~t~~~di~~~~~~l~~~~~  500 (502)
                         +++++|+++++.|.++.+
T Consensus       352 ---~~~~~i~~~~~~l~~~l~  369 (370)
T 2z61_A          352 ---NSYENIKEGLERIKEFLN  369 (370)
T ss_dssp             ---SCHHHHHHHHHHHHHHHC
T ss_pred             ---CCHHHHHHHHHHHHHHHh
Confidence               477799999999988764

>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1

Probab=99.91  E-value=6.2e-23  Score=210.33  Aligned_cols=342  Identities=12%  Similarity=0.059  Sum_probs=220.4

Q ss_pred             HHHHHHHHHhhcCCC-CcccccChhhHHHHHHHHHHHHHh------cCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHH
Q 037144           90 AGIVGEMLSSGFNVV-GLDWISSPAAVELENIVMDWLGQM------LDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARD  162 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~-~~~~~~~p~~~~le~~~~~~l~~l------~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~  162 (502)
                      +..+.+.+...+... ...|....+..++++.+.+|+.+.      .|.+...     ..+++|+||++++..++.+...
T Consensus        52 ~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~la~~~~~~~~~~~~~~~~~~~-----~~v~~~~g~~~al~~~~~~l~~  126 (416)
T 1bw0_A           52 SAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSFVHKEELKSTIVK-----DNVVLCSGGSHGILMAITAICD  126 (416)
T ss_dssp             CHHHHHHHHHHHHTTCSSSCCCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCCG-----GGEEEESHHHHHHHHHHHHHCC
T ss_pred             CHHHHHHHHHHhhCCccCCcCCCCCCHHHHHHHHHHHHhhhcccccCCCCCCc-----ceEEEeCChHHHHHHHHHHhCC
Confidence            344555555444322 234544456788999999998843      3332111     2689999999999877776532


Q ss_pred             HHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecC
Q 037144          163 RVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVG  242 (502)
Q Consensus       163 ~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~g  242 (502)
                                 +++.|+++..+|.++..+++..|+   +++.+|+++++++.+|+++|++++++.      +.+|+++.+
T Consensus       127 -----------~gd~vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~i~~p  186 (416)
T 1bw0_A          127 -----------AGDYALVPQPGFPHYETVCKAYGI---GMHFYNCRPENDWEADLDEIRRLKDDK------TKLLIVTNP  186 (416)
T ss_dssp             -----------TTCEEEEEESCCTHHHHHHHHTTC---EEEEEEEEGGGTTEECHHHHHHHCCTT------EEEEEEESS
T ss_pred             -----------CCCEEEEcCCCcHhHHHHHHHcCc---EEEEeecCcccCCCCCHHHHHHHhccC------CeEEEEeCC
Confidence                       567888888999999999999999   999999875334689999999988643      346777889


Q ss_pred             CccccccCC---hhHHHHHHHHhCCEEEeecccccccccCc----cchhhhcCCCC--CCeeEEccCCcCCCC-CcceEE
Q 037144          243 TTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICP----EFRHFIDGVEC--VDSFSFNPHKWLFTT-LDCCCL  312 (502)
Q Consensus       243 tt~~G~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~----~~~~~~~~~~~--aDsi~~~~hK~l~~p-~~~g~~  312 (502)
                      +|++|.+.|   +++|+++|++||+++++|++|+.+.+...    .... +..+..  .+.++.++||+++.| ..+|++
T Consensus       187 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~Glr~G~~  265 (416)
T 1bw0_A          187 SNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTS-VADFETTVPRVILGGTAKNLVVPGWRLGWL  265 (416)
T ss_dssp             CTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCC-TTSSCCSCCEEEEEESTTTTSCGGGCCEEE
T ss_pred             CCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccC-HHHccCCCcEEEEecchhhCCCCCceEEEE
Confidence            999999988   99999999999999999999987543221    1111 122211  135567899998655 457888


Q ss_pred             EeeCc-hhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHH
Q 037144          313 WVKDP-SCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFER  391 (502)
Q Consensus       313 ~~r~~-~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~  391 (502)
                      +++++ ............+....               +   +........+..+++..+.++++++.++..++++++.+
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~---------------~---~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~  327 (416)
T 1bw0_A          266 LYVDPHGNGPSFLEGLKRVGMLV---------------C---GPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYN  327 (416)
T ss_dssp             EEECTTCSCHHHHHHHHHHHHHH---------------T---CSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EeeCchhhHHHHHHHHHHHhccc---------------c---CCCcHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence            88764 22111110000000000               0   00001122333344433567888999999999999999


Q ss_pred             HHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeECC
Q 037144          392 LVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVGG  470 (502)
Q Consensus       392 ~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g  470 (502)
                      .|+++|++++..+....++.+.+......                   +..    ...++.+++. +.|..+.++..+..
T Consensus       328 ~L~~~~g~~~~~~~~~~~~~~~~~~~~~~-------------------~~~----~~~~~~~~l~~~~gi~v~~g~~f~~  384 (416)
T 1bw0_A          328 HIGECIGLAPTMPRGAMYLMSRIDLEKYR-------------------DIK----TDVEFFEKLLEEENVQVLPGTIFHA  384 (416)
T ss_dssp             HHTTSTTEEECCCCBTTEEEEEECGGGBS-------------------SCC----SHHHHHHHHHHHHCEECEEGGGGTC
T ss_pred             HHHhCCCCcccCCCeeEEEEEeCCHHHcC-------------------CCC----CHHHHHHHHHHHCCEEEecccccCC
Confidence            99998899876443344555555321000                   000    0234556653 56875554443433


Q ss_pred             EEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          471 IYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       471 ~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      ..++|++++   +++++++++++.|.++.++
T Consensus       385 ~~~iRis~~---~~~e~l~~~l~~l~~~l~~  412 (416)
T 1bw0_A          385 PGFTRLTTT---RPVEVYREAVERIKAFCQR  412 (416)
T ss_dssp             TTEEEEECC---SCHHHHHHHHHHHHHHHHH
T ss_pred             CCeEEEEec---CCHHHHHHHHHHHHHHHHH
Confidence            568999984   4677999999999887654

>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*

Probab=99.91  E-value=1.9e-23  Score=211.57  Aligned_cols=320  Identities=10%  Similarity=0.050  Sum_probs=211.1

Q ss_pred             HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144           90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG  169 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~  169 (502)
                      +..+.+.+...+.. ...|...+...++++.    +++++|.+.+       .+++|+||++++..++.+...       
T Consensus        40 ~~~v~~a~~~~~~~-~~~y~~~~~~~~l~~~----la~~~~~~~~-------~v~~~~g~~~a~~~~~~~~~~-------  100 (381)
T 1v2d_A           40 PPFLLEAVRRALGR-QDQYAPPAGLPALREA----LAEEFAVEPE-------SVVVTSGATEALYVLLQSLVG-------  100 (381)
T ss_dssp             CHHHHHHHHHHTTT-SCSCCCTTCCHHHHHH----HHHHHTSCGG-------GEEEESSHHHHHHHHHHHHCC-------
T ss_pred             CHHHHHHHHHHHHH-hcCCCCCCCCHHHHHH----HHHhcCCChh-------hEEEcCChHHHHHHHHHHhCC-------
Confidence            34455666665544 3345544455666655    5555777654       589999999999888876642       


Q ss_pred             ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecC--CCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccc
Q 037144          170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTT--KSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAIT  247 (502)
Q Consensus       170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~--~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G  247 (502)
                          +++.|+++..+|.++..+++..|+   +++.+|++  ++ ++.+|+++|+++++++      +.+|+++.++|++|
T Consensus       101 ----~gd~Vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~-~~~~d~~~l~~~l~~~------~~~v~~~~~~nptG  166 (381)
T 1v2d_A          101 ----PGDEVVVLEPFFDVYLPDAFLAGA---KARLVRLDLTPE-GFRLDLSALEKALTPR------TRALLLNTPMNPTG  166 (381)
T ss_dssp             ----TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECEEETT-EEECCHHHHHTTCCTT------EEEEEEESSCTTTC
T ss_pred             ----CCCEEEEcCCCchhHHHHHHHcCC---EEEEEeCCCCCc-cCCcCHHHHHHhcCcC------CEEEEECCCCCCCC
Confidence                567888889999999999999999   99999986  32 4789999999988532      45788889999999


Q ss_pred             ccCC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhh
Q 037144          248 AVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLST  323 (502)
Q Consensus       248 ~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~  323 (502)
                      .+-|   +++|+++|++||+++|+|++|+++.+ .........-..+.|.++.++||+++.| ..+|++++++. ... .
T Consensus       167 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~-g~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~-~~~-~  243 (381)
T 1v2d_A          167 LVFGERELEAIARLARAHDLFLISDEVYDELYY-GERPRRLREFAPERTFTVGSAGKRLEATGYRVGWIVGPKE-FMP-R  243 (381)
T ss_dssp             CCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBS-SSCCCCHHHHCTTTEEEEEEHHHHTTCGGGCCEEEECCTT-THH-H
T ss_pred             CccCHHHHHHHHHHHHHcCCEEEEEcCcccccc-CCCCCCHHHhcCCCEEEEeechhhcCCcccceEEEEeCHH-HHH-H
Confidence            9865   89999999999999999999987654 2111111100236889999999998744 34888887543 222 2


Q ss_pred             hcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144          324 LSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG-VANLRNFIRSHVGMAKLFERLVTSDKRFEVA  402 (502)
Q Consensus       324 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~  402 (502)
                      +.....+..                 ++   ........+..+++... .++++++.++..++++++.+.|++. ++++.
T Consensus       244 ~~~~~~~~~-----------------~~---~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~  302 (381)
T 1v2d_A          244 LAGMRQWTS-----------------FS---APTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAM-GLRVY  302 (381)
T ss_dssp             HHHHHHHHT-----------------SS---CCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHT-TCCEE
T ss_pred             HHHHHhhcc-----------------cC---CCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHC-CCEec
Confidence            211000000                 00   00001122223333221 4567888999999999999999985 88887


Q ss_pred             cCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC----CEEEEEEEe
Q 037144          403 FPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG----GIYVLRFAA  478 (502)
Q Consensus       403 ~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~----g~~~lR~~~  478 (502)
                      .+....++++.+.+.                           +     +.+.+.+.|..+.++..+.    +..++|+++
T Consensus       303 ~~~~~~~~~~~~~~~---------------------------~-----~~~~l~~~gi~v~~g~~~~~~~~~~~~iRi~~  350 (381)
T 1v2d_A          303 VPEGTYFLMAELPGW---------------------------D-----AFRLVEEARVALIPASAFYLEDPPKDLFRFAF  350 (381)
T ss_dssp             CCSBSSEEEEECTTC---------------------------C-----HHHHHHHTCEECEEGGGGCSSSCCTTEEEEEC
T ss_pred             CCCcceEEEEecChH---------------------------h-----HHHHHHhCCEEEecchHhCCCCCCCCEEEEEe
Confidence            543333444444210                           1     3344555676544433332    356899998


Q ss_pred             cCCCCcHHHHHHHHHHHHHHHHh
Q 037144          479 GNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       479 ~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      +.   ++++|+++++.|.++.++
T Consensus       351 ~~---~~~~i~~~~~~l~~~l~~  370 (381)
T 1v2d_A          351 CK---TEEELHLALERLGRVVNS  370 (381)
T ss_dssp             CS---CHHHHHHHHHHHHHHC--
T ss_pred             CC---CHHHHHHHHHHHHHHHhh
Confidence            64   677999999999887653

>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0

Probab=99.91  E-value=5.3e-23  Score=207.19  Aligned_cols=287  Identities=12%  Similarity=0.069  Sum_probs=200.5

Q ss_pred             HHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCC
Q 037144          120 IVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDR  199 (502)
Q Consensus       120 ~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~  199 (502)
                      ++++++++++|.+..      ...++|+|||+++..++.+...           +++.|+++..+|.++..+++..|.  
T Consensus        71 ~l~~~la~~~g~~~~------~~i~~~~g~t~a~~~~~~~~~~-----------~gd~Vl~~~~~~~~~~~~~~~~g~--  131 (367)
T 3euc_A           71 ALRAKLKEVMQVPAG------MEVLLGNGSDEIISMLALAAAR-----------PGAKVMAPVPGFVMYAMSAQFAGL--  131 (367)
T ss_dssp             HHHHHHHHHHTCCTT------CEEEEEEHHHHHHHHHHHHTCC-----------TTCEEEEEESCSCCSCHHHHTTTC--
T ss_pred             HHHHHHHHHhCCCCc------ceEEEcCCHHHHHHHHHHHHcC-----------CCCEEEEcCCCHHHHHHHHHHcCC--
Confidence            455667778888322      1689999999999877765532           567888888999999999999999  


Q ss_pred             CCEEEEecCCCCCcccCHHHHHHHHHH-HHhcCCccEEEEEecCCcccccc---CChhHHHHHHHHh--CCEEEeecccc
Q 037144          200 KNIRAIKTTKSSSYGLSAESVLSQINL-DVEAELIPLFLCATVGTTAITAV---DPLKPLCDVAKQF--GIWVHVDAAYA  273 (502)
Q Consensus       200 ~~v~~v~~~~~~~~~~d~~~Le~~i~~-~~~~g~~p~~Vv~t~gtt~~G~i---dpl~eI~~i~~~~--g~~lhVDaA~g  273 (502)
                       +++.+|+++  ++.+|+++|++++++ ++      .+|+++.++|++|.+   +++++|+++|++|  |+++++|++|+
T Consensus       132 -~~~~v~~~~--~~~~d~~~l~~~l~~~~~------~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~  202 (367)
T 3euc_A          132 -EFVGVPLRA--DFTLDRGAMLAAMAEHQP------AIVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQ  202 (367)
T ss_dssp             -EEEEEECCT--TSCCCHHHHHHHHHHHCC------SEEEEESSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTC
T ss_pred             -eEEEecCCC--CCCCCHHHHHHHhhccCC------CEEEEcCCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcch
Confidence             999999986  579999999999987 33      377888999999999   4688888889999  99999999998


Q ss_pred             cccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCccccc
Q 037144          274 GSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQIT  353 (502)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~  353 (502)
                      .+...  .....+. ....+.+..++||++..+.+.|+++. ++............|                    +  
T Consensus       203 ~~~~~--~~~~~~~-~~~~~i~~~s~sK~~~~G~r~G~~~~-~~~~~~~~~~~~~~~--------------------~--  256 (367)
T 3euc_A          203 PFAQE--SWMSRLT-DFGNLLVMRTVSKLGLAGIRLGYVAG-DPQWLEQLDKVRPPY--------------------N--  256 (367)
T ss_dssp             CSSSC--CSGGGGG-TCTTEEEEEECCCTTSCSCCEEEEEE-CHHHHHHHGGGCCSS--------------------C--
T ss_pred             hhccc--chHHHHh-hCCCEEEEecchhhcccccCceeeee-CHHHHHHHHHhCCCC--------------------C--
Confidence            64321  1111111 12345777889999444556777776 333322211111000                    0  


Q ss_pred             CCCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCc
Q 037144          354 LCRRFRSLKLWVVIRNFG-VANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTY  432 (502)
Q Consensus       354 ~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~  432 (502)
                          ...+..+++...+. .+++.++.++..++++++.+.|+++|++++. ++..+++.+.+. .               
T Consensus       257 ----~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~-~~~~~~~~~~~~-~---------------  315 (367)
T 3euc_A          257 ----VNVLTEATALFALEHVAVLDEQAAQLRAERSRVAEGMAAHGGVTVF-PSAANFLLARVP-D---------------  315 (367)
T ss_dssp             ----CCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTSTTCEEC-CCSSSEEEEECS-C---------------
T ss_pred             ----CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-CCCCeEEEEECC-C---------------
Confidence                12333333333332 5667889999999999999999999999954 555566666553 1               


Q ss_pred             ccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeE--CCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144          433 DQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIV--GGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       433 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~--~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~  500 (502)
                                     ..++.+.|.++|..+.++..+  .+..++|++++    +++++++++++|+++.+
T Consensus       316 ---------------~~~l~~~l~~~gi~v~~~~~~~~~~~~~iRis~~----~~~~i~~~~~~l~~~l~  366 (367)
T 3euc_A          316 ---------------AAQTFDRLLARKVLIKNVSKMHPLLANCLRVTVS----TPEENAQFLEAFAASLQ  366 (367)
T ss_dssp             ---------------HHHHHHHHHTTTEECEECGGGCGGGTTEEEEECC----CHHHHHHHHHHHHHHTC
T ss_pred             ---------------HHHHHHHHHHCCeEEEECCccCCCCCCEEEEecC----CHHHHHHHHHHHHHHhc
Confidence                           245677777778754433322  13468999975    67799999999998764

>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1

Probab=99.91  E-value=5.5e-23  Score=211.51  Aligned_cols=333  Identities=9%  Similarity=0.036  Sum_probs=219.4

Q ss_pred             HHHHHHHHHhhcCCC---CcccccChhhHHHHHHHHHHHHHhcCCC-CccCcCCCCcEEEcCCchHHHHHHHHHHHHHHH
Q 037144           90 AGIVGEMLSSGFNVV---GLDWISSPAAVELENIVMDWLGQMLDLP-KSFLFSGNGGGVIQGTTCEALLCTLTAARDRVL  165 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~---~~~~~~~p~~~~le~~~~~~l~~l~g~~-~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~  165 (502)
                      +..+.+.+...+...   ...|....+..++++++.+|+.+.+|.+ ...     ...++|+|+++++..++.+...   
T Consensus        60 ~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~-----~~v~~t~G~~~al~~~~~~l~~---  131 (425)
T 1vp4_A           60 RKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLLERMYGITGLDE-----DNLIFTVGSQQALDLIGKLFLD---  131 (425)
T ss_dssp             HHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHHHHHHHHHCCCSCCG-----GGEEEEEHHHHHHHHHHHHHCC---
T ss_pred             HHHHHHHHHHHHhhcchhhcCCCCCCCCHHHHHHHHHHHHhccCCCCCCc-----ccEEEeccHHHHHHHHHHHhCC---
Confidence            445566665555332   2345555567899999999998888853 111     1689999999999877766532   


Q ss_pred             HHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhc--CCccEEE-EEecC
Q 037144          166 KKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEA--ELIPLFL-CATVG  242 (502)
Q Consensus       166 ~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~--g~~p~~V-v~t~g  242 (502)
                              +++.|++...+|.++..+++..|.   +++.+|+++  + .+|+++|+++|++..++  +..+.+| +.+.+
T Consensus       132 --------~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~--~-~~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~  197 (425)
T 1vp4_A          132 --------DESYCVLDDPAYLGAINAFRQYLA---NFVVVPLED--D-GMDLNVLERKLSEFDKNGKIKQVKFIYVVSNF  197 (425)
T ss_dssp             --------TTCEEEEEESCCHHHHHHHHTTTC---EEEEEEEET--T-EECHHHHHHHHHHHHHTTCGGGEEEEEEECSS
T ss_pred             --------CCCEEEEeCCCcHHHHHHHHHcCC---EEEEeccCC--C-CCCHHHHHHHHHhhhhcccCCCceEEEECCCC
Confidence                    567888888999999999999999   999999875  2 39999999999863211  1124465 57789


Q ss_pred             CccccccCC---hhHHHHHHHHhCCEEEeecccccccccCc---cchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeC
Q 037144          243 TTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICP---EFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKD  316 (502)
Q Consensus       243 tt~~G~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~---~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~  316 (502)
                      +|++|.+-|   +++|+++|++||+++++|++|+.+.....   .... +. ....+.++.+++|+++....+|+++++ 
T Consensus       198 ~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~-~~-~~~~~i~~~s~sK~~~~G~r~G~~~~~-  274 (425)
T 1vp4_A          198 HNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFK-IG-GPERVVLLNTFSKVLAPGLRIGMVAGS-  274 (425)
T ss_dssp             CTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHH-HH-CTTTEEEEEESTTTTCGGGCEEEEECC-
T ss_pred             CCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHH-hC-CCCCEEEEeccccccccccceEEEeeC-
Confidence            999999965   67899999999999999999987654221   1111 11 123457788999999833457888876 


Q ss_pred             chhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--c--HHHHHHHHHHHHHHHHHHHHH
Q 037144          317 PSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--G--VANLRNFIRSHVGMAKLFERL  392 (502)
Q Consensus       317 ~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g--~~g~~~~~~~~~~la~~l~~~  392 (502)
                      +.... .+.......                   +.  +  ...+..+++...+  +  .+.++++.++..++++++.+.
T Consensus       275 ~~~~~-~l~~~~~~~-------------------~~--~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~  330 (425)
T 1vp4_A          275 KEFIR-KIVQAKQSA-------------------DL--C--SPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNA  330 (425)
T ss_dssp             HHHHH-HHHHHHHHH-------------------HS--S--CCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHH
T ss_pred             HHHHH-HHHHHhhhh-------------------cC--C--CCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            33322 221100000                   00  0  0233344444433  2  345677788888999999999


Q ss_pred             HhcC-C---CeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeE
Q 037144          393 VTSD-K---RFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIV  468 (502)
Q Consensus       393 l~~~-~---~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~  468 (502)
                      |++. |   ++++..+....++++.++.. .                    +       ..++.+.|.++|..+.++..+
T Consensus       331 L~~~~~~~~g~~~~~~~~g~~~~~~~~~~-~--------------------~-------~~~l~~~l~~~gi~v~~g~~f  382 (425)
T 1vp4_A          331 LEEYFSDIPGVKWVKSEGGLFIWLTLPEG-F--------------------D-------TWEMFEYAKRKKVFYVPGRVF  382 (425)
T ss_dssp             HHHHSTTSTTCEECCCSBSSEEEEECCTT-C--------------------C-------TTTTHHHHHHHTEECEEGGGG
T ss_pred             HHHhCCCCCceEEecCCccEEEEEEcCCC-C--------------------C-------HHHHHHHHHHCCCEEECchhh
Confidence            9873 5   68876444445666665421 0                    0       124566666668655443333


Q ss_pred             ----CCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          469 ----GGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       469 ----~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                          .+..++|++++..  ++++++++++.|.++.++
T Consensus       383 ~~~~~~~~~iRis~~~~--~~e~i~~~l~~l~~~l~~  417 (425)
T 1vp4_A          383 KVYDEPSPSMRLSFCLP--PDEKIVEGIKRLREVVLE  417 (425)
T ss_dssp             CTTCCCCSEEEEECSSS--CHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCCCeEEEEeCCC--CHHHHHHHHHHHHHHHHH
Confidence                1357899998753  678999999999887653

>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}

Probab=99.91  E-value=1.1e-23  Score=215.15  Aligned_cols=329  Identities=12%  Similarity=0.045  Sum_probs=211.9

Q ss_pred             HHHHHHHHHhhcCC-CCcccc------cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHH
Q 037144           90 AGIVGEMLSSGFNV-VGLDWI------SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARD  162 (502)
Q Consensus        90 ~~~~~~~l~~~~n~-~~~~~~------~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~  162 (502)
                      +..+.+.+...+.. ....|.      ..+....+|+.+++++++++|.+..        -+++++||+|+..++.++..
T Consensus        36 ~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g~~~~--------~i~~~sGt~a~~~~~~~~~~  107 (407)
T 2dkj_A           36 SKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFGAAWA--------NVQPHSGSQANMAVYMALME  107 (407)
T ss_dssp             CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEE--------ECCCSSHHHHHHHHHHHHCC
T ss_pred             CHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHhCCCcc--------eEEecchHHHHHHHHHHhcC
Confidence            45566666665532 222222      2333346777777899999998642        35556678888888776632


Q ss_pred             HHHHHhCccCCCCeEEEeCCCCchhH---HHHHHHcCCCCCCEEEEecCCC-CCcccCHHHHHHHHHHHHhcCCccEEEE
Q 037144          163 RVLKKIGRENISKLVVYSSDQTHCAF---QKAAQIVGIDRKNIRAIKTTKS-SSYGLSAESVLSQINLDVEAELIPLFLC  238 (502)
Q Consensus       163 ~~~~~~~~~~~~~~~v~~s~~~H~s~---~~aa~~~Glg~~~v~~v~~~~~-~~~~~d~~~Le~~i~~~~~~g~~p~~Vv  238 (502)
                                 +++.|+++..+|.++   ..+++..|.   .++.++++.+ +++.+|+++|++++++..     +.+|+
T Consensus       108 -----------~gd~Vl~~~~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~d~~~l~~~l~~~~-----~~~v~  168 (407)
T 2dkj_A          108 -----------PGDTLMGMDLAAGGHLTHGSRVNFSGK---LYKVVSYGVRPDTELIDLEEVRRLALEHR-----PKVIV  168 (407)
T ss_dssp             -----------TTCEEEEECGGGTCCGGGTCTTSHHHH---HSEEEEECCCTTTSSCCHHHHHHHHHHHC-----CSEEE
T ss_pred             -----------CCCEEEEecccccCccchHHHHHhcCc---eEEEEecCCCcccCccCHHHHHHHHhhcC-----CeEEE
Confidence                       567888888899776   355556665   5555555321 257899999999997521     22566


Q ss_pred             EecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCch
Q 037144          239 ATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPS  318 (502)
Q Consensus       239 ~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~  318 (502)
                      ++.+++  |.+.|+++|.++|++||+++++|++|+.+....+....   .++..|+++.++||+++++.+ |+++++++.
T Consensus       169 ~~~p~~--~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~---~~~~~di~~~s~sK~l~g~~~-G~~~~~~~~  242 (407)
T 2dkj_A          169 AGASAY--PRFWDFKAFREIADEVGAYLVVDMAHFAGLVAAGLHPN---PLPYAHVVTSTTHKTLRGPRG-GLILSNDPE  242 (407)
T ss_dssp             ECCSSC--CSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCC---CTTTCSEEEEESSGGGCCCSC-EEEEESCHH
T ss_pred             Eecccc--CCCCCHHHHHHHHHHcCCEEEEEccccccccccCccCC---ccccccEEEEeccccCCCCCc-eEEEECCHH
Confidence            655555  47889999999999999999999999875543322111   123579999999999987765 888876544


Q ss_pred             hhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCC-chHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 037144          319 CLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFR-SLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK  397 (502)
Q Consensus       319 ~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~-al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~  397 (502)
                      ...........+..                     .+.... ...+..+++.+..++++++.++..++++++.+.|++. 
T Consensus       243 ~~~~l~~~~~~~~~---------------------~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-  300 (407)
T 2dkj_A          243 LGKRIDKLIFPGIQ---------------------GGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELARR-  300 (407)
T ss_dssp             HHHHHHHHHTTTTC---------------------SSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             HHHHHHhhhccccc---------------------CCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhC-
Confidence            33221110001100                     000001 1234455555445778899999999999999999998 


Q ss_pred             CeEEecC-CCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeee------ECC
Q 037144          398 RFEVAFP-RNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAI------VGG  470 (502)
Q Consensus       398 ~~~l~~~-~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~------~~g  470 (502)
                      +++++.+ ...+++++.+...+.                           ....+.+.|.+.|..+..+..      ...
T Consensus       301 g~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~  353 (407)
T 2dkj_A          301 GYRIVTGGTDNHLFLVDLRPKGL---------------------------TGKEAEERLDAVGITVNKNAIPFDPKPPRV  353 (407)
T ss_dssp             TCEEGGGSCSSSEEEEECGGGTC---------------------------CHHHHHHHHHHTTEECEECCCTTCSSCTTT
T ss_pred             CceeecCCCCceEEEEECcccCC---------------------------CHHHHHHHHHHcCceecCCcCccccccccC
Confidence            8988753 356677777643110                           023566677677865443321      112


Q ss_pred             EEEEEEEecCC---CCcHHHHHHHHHHHHHHHH
Q 037144          471 IYVLRFAAGNS---MTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       471 ~~~lR~~~~~~---~t~~~di~~~~~~l~~~~~  500 (502)
                      ..++|++++.+   ..+++++++++++|+++.+
T Consensus       354 ~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~  386 (407)
T 2dkj_A          354 TSGIRIGTPAITTRGFTPEEMPLVAELIDRALL  386 (407)
T ss_dssp             CSEEEEECHHHHHTTCCGGGHHHHHHHHHHHHH
T ss_pred             CCceeeecccccccCCCHHHHHHHHHHHHHHHh
Confidence            46899998542   2566799999999988765

>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}

Probab=99.91  E-value=3.7e-23  Score=210.70  Aligned_cols=326  Identities=10%  Similarity=0.049  Sum_probs=217.6

Q ss_pred             HHHHHHHHHhhcCCC----CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHH
Q 037144           90 AGIVGEMLSSGFNVV----GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVL  165 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~----~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~  165 (502)
                      +..+.+.+...+...    ...|...++..++++++.+|+.+.+|.+...     ...++|+||++++..++.+...   
T Consensus        50 ~~~v~~a~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~-----~~i~~~~g~~~al~~~~~~l~~---  121 (398)
T 3ele_A           50 PQIVNDTIKELVTDYDSVALHGYTSAQGDVETRAAIAEFLNNTHGTHFNA-----DNLYMTMGAAASLSICFRALTS---  121 (398)
T ss_dssp             CHHHHHHHHHHHHHSCHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCG-----GGEEEESSHHHHHHHHHHHHCC---
T ss_pred             CHHHHHHHHHHHhcCCccccCCcCCCCCcHHHHHHHHHHHHHHhCCCCCh-----HHEEEccCHHHHHHHHHHHHcC---
Confidence            344555555544332    2345555666899999999999999964221     2689999999999888776643   


Q ss_pred             HHhCccCCCC-eEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCc
Q 037144          166 KKIGRENISK-LVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTT  244 (502)
Q Consensus       166 ~~~~~~~~~~-~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt  244 (502)
                              ++ +.|+++..+|.++..+++..|+   +++.+|++++ ++.+|+++|+++++++      +.+|+++.++|
T Consensus       122 --------~g~d~vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~~-~~~~d~~~l~~~l~~~------~~~v~~~~p~n  183 (398)
T 3ele_A          122 --------DAYDEFITIAPYFPEYKVFVNAAGA---RLVEVPADTE-HFQIDFDALEERINAH------TRGVIINSPNN  183 (398)
T ss_dssp             --------STTCEEEEESSCCTHHHHHHHHTTC---EEEEECCCTT-TSSCCHHHHHHTCCTT------EEEEEECSSCT
T ss_pred             --------CCCCEEEEeCCCchhhHHHHHHcCC---EEEEEecCCc-CCcCCHHHHHHHhCcC------CCEEEEcCCCC
Confidence                    56 7888899999999999999999   9999999753 5799999999998643      34788889999


Q ss_pred             cccccCC---hhHHHHHHHH------hCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCC-CCCcceEEEe
Q 037144          245 AITAVDP---LKPLCDVAKQ------FGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLF-TTLDCCCLWV  314 (502)
Q Consensus       245 ~~G~idp---l~eI~~i~~~------~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~  314 (502)
                      ++|.+-|   +++|+++|++      ||+++++|++|+.+......... .......+.++.++||+++ .+...|++++
T Consensus       184 ptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~  262 (398)
T 3ele_A          184 PSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPF-VTKYYDNTLVCYSYSKSLSLPGERIGYVLV  262 (398)
T ss_dssp             TTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCC-GGGTCSSEEEEEESTTTSSCTTTCCEEEEC
T ss_pred             CCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCC-hHhhcCCeEEEEehhhcCCCccceeEEEEE
Confidence            9999987   7777799999      99999999999875542211111 1112245577889999997 5567899887


Q ss_pred             eCchh----hhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHH
Q 037144          315 KDPSC----LLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFE  390 (502)
Q Consensus       315 r~~~~----l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~  390 (502)
                      ++...    +...+........                      .-....+..+++...+...   ...+++.++++++.
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~l~  317 (398)
T 3ele_A          263 PDEVYDKAELYAAVCGAGRALG----------------------YVCAPSLFQKMIVKCQGAT---GDINAYKENRDLLY  317 (398)
T ss_dssp             CTTSTTHHHHHHHHHHHHHHTT----------------------CCCSCHHHHHHHTTCTTCC---CCHHHHHHHHHHHH
T ss_pred             cchhhhHHHHHHHHHHHhhhcc----------------------ccCCCHHHHHHHHHHhcCH---HHHHHHHHHHHHHH
Confidence            66521    1111100000000                      0000122223322222111   13566778888899


Q ss_pred             HHHhcCCCeEEecCCCeeE-EEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC
Q 037144          391 RLVTSDKRFEVAFPRNFSL-VCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG  469 (502)
Q Consensus       391 ~~l~~~~~~~l~~~~~~~~-v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~  469 (502)
                      +.|+++ ++++.. +..++ +++.++...                             ..++.+.+.++|..+.++..+.
T Consensus       318 ~~L~~~-g~~~~~-~~~~~~~~~~~~~~~-----------------------------~~~~~~~l~~~gi~v~~g~~~~  366 (398)
T 3ele_A          318 EGLTRI-GYHCFK-PDGAFYMFVKALEDD-----------------------------SNAFCEKAKEEDVLIVAADGFG  366 (398)
T ss_dssp             HHHHHH-TCCEEC-CSBSSEEEEECSSSC-----------------------------HHHHHHHHHTTTEECEESGGGT
T ss_pred             HHHHHc-CCeecC-CCeeEEEEEEcCCCC-----------------------------HHHHHHHHHHCCEEEeCccccC
Confidence            999887 787764 44454 445443211                             2456677777787555444444


Q ss_pred             CEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          470 GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       470 g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      ...++|++++   +++++|+++++.|.++.++
T Consensus       367 ~~~~iRis~~---~~~e~i~~~l~~l~~~l~~  395 (398)
T 3ele_A          367 CPGWVRISYC---VDREMIKHSMPAFEKIYKK  395 (398)
T ss_dssp             CTTEEEEECC---SCHHHHHHHHHHHHHHHHH
T ss_pred             CCCeEEEEec---CCHHHHHHHHHHHHHHHHH
Confidence            4569999985   5788999999999988764

>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}

Probab=99.91  E-value=5.1e-23  Score=224.84  Aligned_cols=241  Identities=12%  Similarity=0.067  Sum_probs=172.4

Q ss_pred             HHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCC
Q 037144          120 IVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDR  199 (502)
Q Consensus       120 ~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~  199 (502)
                      +..+.+++++|.+.        ..++++|+++||..++.+...           +++.|+++...|.|+..++...|+  
T Consensus       209 ~~ee~la~l~G~d~--------~i~~~~Gtt~a~~~~i~al~~-----------~GD~Vlv~~~~h~s~~~~~~~~G~--  267 (755)
T 2vyc_A          209 ESEKYAARVFGADR--------SWSVVVGTSGSNRTIMQACMT-----------DNDVVVVDRNCHKSIEQGLMLTGA--  267 (755)
T ss_dssp             HHHHHHHHHHTCSE--------EEEESSHHHHHHHHHHHHHCC-----------TTCEEEEESSCCHHHHHHHHHHCC--
T ss_pred             HHHHHHHHHhCCCc--------eEEECCcHHHHHHHHHHHhcC-----------CCCEEEECCCchHHHHHHHHHcCC--
Confidence            45577899999864        357777778888877776543           678899999999999999999999  


Q ss_pred             CCEEEEecCCCC---Cccc-----CHHHHHHHHHHH--H--hcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEE
Q 037144          200 KNIRAIKTTKSS---SYGL-----SAESVLSQINLD--V--EAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVH  267 (502)
Q Consensus       200 ~~v~~v~~~~~~---~~~~-----d~~~Le~~i~~~--~--~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lh  267 (502)
                       +++.++.+.+.   .+.+     |+++|+++|++.  +  +.+.+|.+|+++.+ |++|.+.|+++|+++|++||+++|
T Consensus       268 -~~v~v~~~~~~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~dl~~I~~ia~~~~~~li  345 (755)
T 2vyc_A          268 -KPVYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNAKEAQDLLEKTSDRLH  345 (755)
T ss_dssp             -EEEEECCCBCTTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEECHHHHHHHHTTTCSEEE
T ss_pred             -EEEEEeCCCCccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecCHHHHHHHHHHcCCEEE
Confidence             99999886431   1246     999999999863  2  24556667888886 689999999999999999999999


Q ss_pred             eecccccccccCccchhhhcCCCC--CCe------eEEccCCcCCCCCcceEEEeeCc--hhhhhhhcCCcccccCccCC
Q 037144          268 VDAAYAGSACICPEFRHFIDGVEC--VDS------FSFNPHKWLFTTLDCCCLWVKDP--SCLLSTLSTNPQYLKNEATD  337 (502)
Q Consensus       268 VDaA~g~~~~~~~~~~~~~~~~~~--aDs------i~~~~hK~l~~p~~~g~~~~r~~--~~l~~~~~~~~~yl~~~~~~  337 (502)
                      ||+||+++..+.+.++.. ..+.+  +|+      ++.++||++++|.++|++++++.  ..-...+......+.     
T Consensus       346 vDeA~~~~~~~~~~~~~~-~~~~g~~aD~~~~~~iv~~S~hK~L~g~~~g~~i~~~~~~~~i~~~~~~~~~~~~~-----  419 (755)
T 2vyc_A          346 FDEAWYGYARFNPIYADH-YAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQAYMMHA-----  419 (755)
T ss_dssp             EECTTCTTGGGCGGGTTS-SSSCSCCCCCSSBEEEEEEETTTSSSCCTTCEEEEEECCBTCCCHHHHHHHHHHTS-----
T ss_pred             EECcCchhcccCcccCCc-chhcCCcCCccCCCeEEEECccccccCcCCeeeeeecCcccccCHHHHHHHHHHhC-----
Confidence            999998765444432111 11124  787      99999999999988999998775  110001100000010     


Q ss_pred             CCCcccccCCCcccccCCCC--CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC---------eEEecCC
Q 037144          338 QEPKEQEVGYKDWQITLCRR--FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKR---------FEVAFPR  405 (502)
Q Consensus       338 ~~~~~~~~~~~~~~~~~sr~--~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~---------~~l~~~~  405 (502)
                                      .+.+  ....++-.+++.+..+|..+++++..++++++++.|+++++         |+++.+.
T Consensus       420 ----------------s~sp~~~~iaal~aA~~~l~~~gg~~~~~~~~~~a~~~r~~L~~l~~~~~~~~~~~~~~~~~~  482 (755)
T 2vyc_A          420 ----------------TTSPLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKE  482 (755)
T ss_dssp             ----------------CSSCCHHHHHHHHHHHHHHSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEESSCS
T ss_pred             ----------------CCCHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccccccccccceeeccCch
Confidence                            0111  01234445666666665678899999999999999999887         8887643

>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}

Probab=99.91  E-value=9e-23  Score=208.97  Aligned_cols=333  Identities=14%  Similarity=0.090  Sum_probs=217.1

Q ss_pred             HHHHHHHHHhhcCCC-CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHh
Q 037144           90 AGIVGEMLSSGFNVV-GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKI  168 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~-~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~  168 (502)
                      +..+.+.+...+... ...|...++..++++.+.+|+.+.+|.+...    ....++|+||++|+..++.+...      
T Consensus        52 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~~~g~~~~~----~~~v~~t~g~~~a~~~~~~~~~~------  121 (412)
T 2x5d_A           52 PPHIVEKLCTVAQREDTHGYSTSRGIPRLRRAISHWYRDRYDVQIDP----ESEAIVTIGSKEGLAHLMLATLD------  121 (412)
T ss_dssp             CHHHHHHHHHTC---------CTTCCHHHHHHHHHHHHHHHCCCCCT----TTSEEEESCHHHHHHHHHHHHCC------
T ss_pred             CHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC----CcCEEEcCChHHHHHHHHHHhCC------
Confidence            345666666665433 3345555667899999999999988863210    01589999999999888776532      


Q ss_pred             CccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144          169 GRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA  248 (502)
Q Consensus       169 ~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~  248 (502)
                           +++.|+++..+|.++..+++..|.   +++.+|+++++++.+|+++|+++++++      +.+|+++.++|++|.
T Consensus       122 -----~gd~Vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~i~~~------~~~v~l~~p~nptG~  187 (412)
T 2x5d_A          122 -----HGDTILVPNPSYPIHIYGAVIAGA---QVRSVPLVPGIDFFNELERAIRESIPK------PRMMILGFPSNPTAQ  187 (412)
T ss_dssp             -----TTCEEEEEESCCHHHHHHHHHHTC---EEEEEECSTTSCHHHHHHHHHHTEESC------CSEEEEESSCTTTCC
T ss_pred             -----CCCEEEEcCCCchhHHHHHHHcCC---EEEEeecCCccCCCCCHHHHHHhcccC------ceEEEECCCCCCCCC
Confidence                 567888888999999999999999   999999986434568999999887532      336777889999999


Q ss_pred             cCC---hhHHHHHHHHhCCEEEeecccccccccCccchhh--hcCCCCCCeeEEccCCcCCC-CCcceEEEeeCchhhhh
Q 037144          249 VDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF--IDGVECVDSFSFNPHKWLFT-TLDCCCLWVKDPSCLLS  322 (502)
Q Consensus       249 idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~~-p~~~g~~~~r~~~~l~~  322 (502)
                      +-|   +++|+++|++||+++++|++|+.+.+........  +.+....|.++.++||+++. ...+|+++++ +.... 
T Consensus       188 ~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~-~~~~~-  265 (412)
T 2x5d_A          188 CVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVGN-PELVS-  265 (412)
T ss_dssp             CCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CCSCTTSCCEEEEEC-HHHHH-
T ss_pred             cCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCccccCCcccceEEEEcC-HHHHH-
Confidence            865   7889999999999999999998865422111111  11113567889999999974 4467888874 33322 


Q ss_pred             hhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 037144          323 TLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSDKRFE  400 (502)
Q Consensus       323 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~~~~  400 (502)
                      .+.....+...                       ....+..+++...+  +.+.++++.++..++++++.+.|++. +++
T Consensus       266 ~l~~~~~~~~~-----------------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~  321 (412)
T 2x5d_A          266 ALARIKSYHDY-----------------------GTFTPLQVAAIAALEGDQQCVRDIARQYQQRRDVLVKGLREA-GWM  321 (412)
T ss_dssp             HHHHHHHHHCC-----------------------CCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHHH-TCC
T ss_pred             HHHHHHhhhcc-----------------------CCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCE
Confidence            22111000000                       01223333333333  45678888899999999999999887 777


Q ss_pred             EecCCCeeE-EEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh-cCcEEEEeeeEC--CEEEEEE
Q 037144          401 VAFPRNFSL-VCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV-SGKVFMTHAIVG--GIYVLRF  476 (502)
Q Consensus       401 l~~~~~~~~-v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--g~~~lR~  476 (502)
                      +. ++..++ +++.++. ..                    ..    ....++.++|.+ .|..+.++..+.  +..++|+
T Consensus       322 ~~-~~~~g~~~~~~~~~-~~--------------------~~----~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi  375 (412)
T 2x5d_A          322 VE-NPKASMYVWAKIPE-PY--------------------AH----LGSLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRF  375 (412)
T ss_dssp             CC-CCSBSSEEEEECCT-TT--------------------GG----GCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEE
T ss_pred             ec-CCCeeeEEEEEcCC-cc--------------------CC----CCHHHHHHHHHHHCCEEEeCchhhCCCCCCeEEE
Confidence            65 445453 4455532 10                    00    002356666654 486544433332  2468999


Q ss_pred             EecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          477 AAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       477 ~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      +++.   ++++++++++.|.++.++
T Consensus       376 s~~~---~~~~l~~~l~~l~~~l~~  397 (412)
T 2x5d_A          376 ALIE---NRDRLRQAVRGIKAMFRA  397 (412)
T ss_dssp             ECCS---CHHHHHHHHHHHHHHHHH
T ss_pred             EecC---CHHHHHHHHHHHHHHHHh
Confidence            9863   677999999999988764

>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}

Probab=99.91  E-value=4.6e-23  Score=208.06  Aligned_cols=321  Identities=15%  Similarity=0.105  Sum_probs=209.8

Q ss_pred             HHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccC
Q 037144           93 VGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGREN  172 (502)
Q Consensus        93 ~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~  172 (502)
                      +.+.+...+...  .|...+...+++    +.+++++|.+         .+++++|||+|+..++.+++-.         
T Consensus        21 ~~~~~~~~~~~~--~~~~~~~~~~l~----~~la~~~~~~---------~~~~~~~gt~a~~~~~~~~~~~---------   76 (374)
T 3uwc_A           21 YLNDLREFIKTA--DFTLGAELEKFE----KRFAALHNAP---------HAIGVGTGTDALAMSFKMLNIG---------   76 (374)
T ss_dssp             HHHHHHHHHHHT--CCSSCHHHHHHH----HHHHHHTTCS---------EEEEESCHHHHHHHHHHHTTCC---------
T ss_pred             HHHHHHHHHHcC--CcccChhHHHHH----HHHHHHhCCC---------cEEEeCCHHHHHHHHHHHcCCC---------
Confidence            555555554332  244455555555    4567777765         3789999999998777765211         


Q ss_pred             CCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCCh
Q 037144          173 ISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPL  252 (502)
Q Consensus       173 ~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl  252 (502)
                       +++.|+++..+|.++..+++..|+   +++.+|++.  ++.+|+++|++++++++      .+|+   +++++|.+.|+
T Consensus        77 -~gd~v~~~~~~~~~~~~~~~~~g~---~~~~~~~~~--~~~~d~~~l~~~~~~~~------~~v~---~~n~~G~~~~~  141 (374)
T 3uwc_A           77 -AGDEVITCANTFIASVGAIVQAGA---TPVLVDSEN--GYVIDPEKIEAAITDKT------KAIM---PVHYTGNIADM  141 (374)
T ss_dssp             -TTCEEEEESSSCHHHHHHHHHTTC---EEEEECBCT--TSSBCGGGTGGGCCTTE------EEEC---CBCGGGCCCCH
T ss_pred             -CCCEEEECCCccHHHHHHHHHcCC---EEEEEecCC--CCCcCHHHHHHhCCCCc------eEEE---EeCCcCCcCCH
Confidence             577899999999999999999999   999999973  57999999999886532      3444   67899999999


Q ss_pred             hHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccC--CcCCCCCcceEEEeeCchhhhhhhcCCccc
Q 037144          253 KPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPH--KWLFTTLDCCCLWVKDPSCLLSTLSTNPQY  330 (502)
Q Consensus       253 ~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~h--K~l~~p~~~g~~~~r~~~~l~~~~~~~~~y  330 (502)
                      ++|.++|++||+++|+|++|+.+.........     ..+|.+++++|  |+++.+...|+++.+++..........   
T Consensus       142 ~~i~~~~~~~~~~li~D~~~~~g~~~~~~~~~-----~~~d~~~~s~~~~K~l~~~g~~g~~~~~~~~~~~~~~~~~---  213 (374)
T 3uwc_A          142 PALAKIAKKHNLHIVEDACQTILGRINDKFVG-----SWGQFACFSLHPLKNLNVWSDAGVIITHSDEYAEKLRLYR---  213 (374)
T ss_dssp             HHHHHHHHHTTCEEEEECTTCTTCEETTEETT-----SSSSEEEEECSSSSSSCCSSCCEEEEESCHHHHHHHHHHT---
T ss_pred             HHHHHHHHHcCCEEEEeCCCccCceeCCeecc-----ccccEEEEeCCCCCcCCccceeEEEEeCCHHHHHHHHHHH---
Confidence            99999999999999999999865442211111     13699999987  999764446666666554322111100   


Q ss_pred             ccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC-eEEecCCCe--
Q 037144          331 LKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKR-FEVAFPRNF--  407 (502)
Q Consensus       331 l~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~-~~l~~~~~~--  407 (502)
                       .....      ..+.    ....+.......+..++.....++++++.++..++++++.+.|+++++ +++...+..  
T Consensus       214 -~~~~~------~~~~----~~~~~~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~  282 (374)
T 3uwc_A          214 -NHGLI------NRDV----CVEYGINCRMDTIQAVIANRLMNQLETITEKRRGIAHLYDQSFVDLSEFIDVPVRREGVY  282 (374)
T ss_dssp             -BTTEE------ETTE----ESSCCCBCBCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHTGGGTTTEECCCCCTTEE
T ss_pred             -hcCcc------ccCc----cccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEeccCCCCCc
Confidence             00000      0000    000111223334445555545677888999999999999999999987 887543321  


Q ss_pred             -eEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEee--e------E----------
Q 037144          408 -SLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHA--I------V----------  468 (502)
Q Consensus       408 -~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~--~------~----------  468 (502)
                       +.+.|......                             ..++.+.|.++|.......  .      +          
T Consensus       283 ~~~~~~~~~~~~-----------------------------~~~l~~~L~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~  333 (374)
T 3uwc_A          283 HVFHIYVLRVKY-----------------------------RDQLFQYLKDNGIEVKIHYPIAMHLQPAAKSLGYQQGDF  333 (374)
T ss_dssp             CCCSSEEEEETT-----------------------------HHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSC
T ss_pred             eeeEEEEEEcCC-----------------------------HHHHHHHHHHCCCccccCCCCccccChhhhhcCCccCCC
Confidence             11223222111                             2456777777786432221  0      0          


Q ss_pred             -----CCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          469 -----GGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       469 -----~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                           .....+|+++. +.++++||+++++.|+++.++
T Consensus       334 ~~~~~~~~~~lrl~~~-~~~t~edi~~~~~~l~~~l~~  370 (374)
T 3uwc_A          334 PMAEKHGEAVITLPAH-PYLTEEEINYIIKKVREFYLE  370 (374)
T ss_dssp             HHHHHHHHHEEEECCC-TTSCHHHHHHHHHHHHHHHHT
T ss_pred             ccHHHHHhCEEEccCC-CCCCHHHHHHHHHHHHHHHHh
Confidence                 01268999975 567788999999999998764

>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}

Probab=99.91  E-value=1.8e-22  Score=203.20  Aligned_cols=311  Identities=10%  Similarity=0.071  Sum_probs=211.4

Q ss_pred             HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144           90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG  169 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~  169 (502)
                      +..+.+.+...+.. ...|..... .    ++++++++++|.+.+       ..++|+||++++..++.+...       
T Consensus        45 ~~~v~~a~~~~~~~-~~~y~~~~~-~----~lr~~la~~~~~~~~-------~v~~~~g~~~a~~~~~~~l~~-------  104 (365)
T 3get_A           45 PPKAIECLRQNANK-AHLYPDDSM-I----ELKSTLAQKYKVQNE-------NIIIGAGSDQVIEFAIHSKLN-------  104 (365)
T ss_dssp             CHHHHHHHHHHGGG-TTSCCCTTC-H----HHHHHHHHHHTCCGG-------GEEEESSHHHHHHHHHHHHCC-------
T ss_pred             CHHHHHHHHHHHHh-hccCCCCCh-H----HHHHHHHHHhCCCcc-------eEEECCCHHHHHHHHHHHHhC-------
Confidence            34455555555432 223332222 3    445667777887654       689999999999877766532       


Q ss_pred             ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144          170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV  249 (502)
Q Consensus       170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i  249 (502)
                          +++.|+++..+|.++...++..|.   +++.+|++ ++++ +|+++|+++++++      +.+|+++.++|++|.+
T Consensus       105 ----~gd~vl~~~~~~~~~~~~~~~~g~---~~~~v~~~-~~~~-~d~~~l~~~l~~~------~~~v~~~~p~nptG~~  169 (365)
T 3get_A          105 ----SKNAFLQAGVTFAMYEIYAKQCGA---KCYKTQSI-THNL-DEFKKLYETHKDE------IKLIFLCLPNNPLGEC  169 (365)
T ss_dssp             ----TTCEEEECSSCCTHHHHHHHHHTC---EEEECSSS-SCCH-HHHHHHHHHTTTT------EEEEEEESSCTTTCCC
T ss_pred             ----CCCEEEEeCCChHHHHHHHHHcCC---EEEEEecC-CCCC-CCHHHHHHHhCCC------CCEEEEcCCCCCCCCC
Confidence                567889999999999999999999   99999982 2368 9999999998743      3478888999999999


Q ss_pred             CChhHHHHHHH--HhCCEEEeecccccccc--cCcc---chhhhcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhh
Q 037144          250 DPLKPLCDVAK--QFGIWVHVDAAYAGSAC--ICPE---FRHFIDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLL  321 (502)
Q Consensus       250 dpl~eI~~i~~--~~g~~lhVDaA~g~~~~--~~~~---~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~  321 (502)
                      -|+++|.++++  ++|+++++|++|+.+.+  ....   ...... ....+.++.++||+++ .+...|+++. ++....
T Consensus       170 ~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~-~~~~~~  247 (365)
T 3get_A          170 LDASEATEFIKGVNEDCLVVIDAAYNEFASFKDSKKHLEPCELIK-EFDNVLYLGTFSKLYGLGGLRIGYGIA-NANIIS  247 (365)
T ss_dssp             CCHHHHHHHHHTSCTTSEEEEECTTHHHHHHHCGGGCCCHHHHHH-HCTTEEEEEESSSTTSCTTTCCEEEEE-CHHHHH
T ss_pred             cCHHHHHHHHHhCCCCcEEEEeCccHHHhcccCCcccccHhHHhc-cCCCEEEEeecchHhcCcchheEEEEc-CHHHHH
Confidence            99999999988  77999999999986553  2111   111111 1145577889999997 4456788877 444332


Q ss_pred             hhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 037144          322 STLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF-GVANLRNFIRSHVGMAKLFERLVTSDKRFE  400 (502)
Q Consensus       322 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~la~~l~~~l~~~~~~~  400 (502)
                      ........|                    +      ...+..+++...+ ..+++++..++..++++++.+.|+++ +++
T Consensus       248 ~~~~~~~~~--------------------~------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~  300 (365)
T 3get_A          248 AFYKLRAPF--------------------N------VSNLALKAAVAAMDDDEFTEKTLENNFSQMELYKEFAKKH-NIK  300 (365)
T ss_dssp             HHHHHSCTT--------------------C------SCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT-TCE
T ss_pred             HHHHhcCCC--------------------C------cCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCE
Confidence            211111000                    0      1223333333333 24678889999999999999999998 888


Q ss_pred             EecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecC
Q 037144          401 VAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGN  480 (502)
Q Consensus       401 l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~  480 (502)
                      +. ++..+++.+.+....                             ..++.+.|.++|..+.++..+. ..++|++++ 
T Consensus       301 ~~-~~~~~~~~~~~~~~~-----------------------------~~~~~~~l~~~gi~v~~g~~~~-~~~iRis~~-  348 (365)
T 3get_A          301 II-DSYTNFITYFFDEKN-----------------------------STDLSEKLLKKGIIIRNLKSYG-LNAIRITIG-  348 (365)
T ss_dssp             EC-CCSSSEEEEECSSSC-----------------------------HHHHHHHHHTTTEECEECGGGT-CSEEEEECC-
T ss_pred             EC-CCCCeEEEEECCCCC-----------------------------HHHHHHHHHHCCEEEEECccCC-CCEEEEEcC-
Confidence            75 555566666554311                             3466777777886544433333 679999975 


Q ss_pred             CCCcHHHHHHHHHHHHHHH
Q 037144          481 SMTMESHVRAAWTVVQEHL  499 (502)
Q Consensus       481 ~~t~~~di~~~~~~l~~~~  499 (502)
                         +++++++++++|+++.
T Consensus       349 ---~~~~i~~l~~~l~~~l  364 (365)
T 3get_A          349 ---TSYENEKFFTEFDKIL  364 (365)
T ss_dssp             ---CHHHHHHHHHHHHHHH
T ss_pred             ---CHHHHHHHHHHHHHHh
Confidence               5679999999998875

>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*

Probab=99.90  E-value=1.2e-22  Score=208.58  Aligned_cols=318  Identities=13%  Similarity=0.044  Sum_probs=201.6

Q ss_pred             HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH
Q 037144          115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI  194 (502)
Q Consensus       115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~  194 (502)
                      .++..++.+++++++|.+.         .+++++||+|+..++.+.+-.          +++.|+++..+|.++..+++.
T Consensus        41 ~~l~~~l~~~la~~~g~~~---------~i~~~~gt~al~~~~~~~~~~----------~gd~Vl~~~~~~~~~~~~~~~  101 (418)
T 2c81_A           41 ESMERKFAKAFADFNGVPY---------CVPTTSGSTALMLALEALGIG----------EGDEVIVPSLTWIATATAVLN  101 (418)
T ss_dssp             CCHHHHHHHHHHHHHTCSE---------EEEESCHHHHHHHHHHHTTCC----------TTCEEEEESSSCTHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCc---------EEEeCCHHHHHHHHHHHcCCC----------CcCEEEECCCccHhHHHHHHH
Confidence            4455667788889888862         578888999998887765211          567889999999999999999


Q ss_pred             cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccccc
Q 037144          195 VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAG  274 (502)
Q Consensus       195 ~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~  274 (502)
                      .|+   +++.+|++++ ++.+|+++|+++|+++      +.+|+++   +++|...|+++|.++|++||+++|+|++|+.
T Consensus       102 ~g~---~~~~~~~~~~-~~~~d~~~l~~~i~~~------~~~v~~~---~~~G~~~~~~~i~~~~~~~~~~li~D~a~~~  168 (418)
T 2c81_A          102 VNA---LPVFVDVEAD-TYCIDPQLIKSAITDK------TKAIIPV---HLFGSMANMDEINEIAQEHNLFVIEDCAQSH  168 (418)
T ss_dssp             TTC---EEEEECBCTT-TCSBCHHHHGGGCCTT------EEEECCB---CCTTCCCCHHHHHHHHHHTTCEEEEECTTCT
T ss_pred             cCC---EEEEEecCCC-CCCcCHHHHHHhhCCC------CeEEEEe---CCcCCcccHHHHHHHHHHCCCEEEEECcccc
Confidence            999   9999999752 5799999999988643      2355543   4789999999999999999999999999987


Q ss_pred             ccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCc-----
Q 037144          275 SACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKD-----  349 (502)
Q Consensus       275 ~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~-----  349 (502)
                      +......  . +..+..++++++++||+++.+ .+|+++.+++..... +.....+.......  +......+.+     
T Consensus       169 ~~~~~~~--~-~~~~~~~~~~s~s~~K~~~~g-~~g~~~~~~~~l~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  241 (418)
T 2c81_A          169 GSVWNNQ--R-AGTIGDIGAFSCQQGKVLTAG-EGGIIVTKNPRLFEL-IQQLRADSRVYCDD--SSELMHGDMQLVKKG  241 (418)
T ss_dssp             TCEETTE--E-TTSSSSEEEEECCTTSSSCSS-SCEEEEESCHHHHHH-HHHHHBTTEEECSC--GGGCCTTCBSEEECC
T ss_pred             cCccCCE--e-cccccceEEEeccCCcccCCC-CeEEEEECCHHHHHH-HHHHHHhCcccccc--ccccccchhhccccc
Confidence            7532111  1 111223556666679999773 566666655543221 11000000000000  0000000100     


Q ss_pred             ccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCe------eEEEEEeecC---cch
Q 037144          350 WQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNF------SLVCFRVTPS---AVM  420 (502)
Q Consensus       350 ~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~------~~v~f~~~~~---~~~  420 (502)
                      ..+....+...+..  ++.....++++++.++..++++++.+.|+++|++++..++..      .++++.+...   +. 
T Consensus       242 ~~~g~~~~~~~~~a--a~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  318 (418)
T 2c81_A          242 DIQGSNYCLSEFQS--AILLDQLQELDDKNAIREKNAMFLNDALSKIDGIKVMKRPPQVSRQTYYGYVFRFDPVKFGGL-  318 (418)
T ss_dssp             SSCCCBCCCCHHHH--HHHHHHHTTHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCTTEEECCCSEEEEEECGGGTTTC-
T ss_pred             cccCcCCCcCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcccCCCCCCCcccccEEEEEEEcccccccc-
Confidence            00011112222322  222223456788888999999999999999999998744432      2455665420   10 


Q ss_pred             hhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcE---EEEeee-E------C--------------------
Q 037144          421 DKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKV---FMTHAI-V------G--------------------  469 (502)
Q Consensus       421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~---~~~~~~-~------~--------------------  469 (502)
                                                ...++.+.|.++ |..   .-.+.. .      .                    
T Consensus       319 --------------------------~~~~l~~~L~~~~gI~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  372 (418)
T 2c81_A          319 --------------------------NADQFCEILREKLNMGTFYLHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRG  372 (418)
T ss_dssp             --------------------------CHHHHHHHHHHHHTCCTTTEECCCCCGGGCTTCCGGGCTTSCHHHHCCHHHHHT
T ss_pred             --------------------------CHHHHHHHHHHcCCCCcccccccccccccCchhccccccccccccccccccccc
Confidence                                      024567777777 765   322110 0      0                    


Q ss_pred             C---------EEEEEEEecCCCC-cHHHHHHHHHHHHHHHHh
Q 037144          470 G---------IYVLRFAAGNSMT-MESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       470 g---------~~~lR~~~~~~~t-~~~di~~~~~~l~~~~~~  501 (502)
                      +         ...||+++. +.+ +++||++++++|+++.++
T Consensus       373 ~~~~~~~~~~~~~lrl~~~-~~~gt~edi~~~~~~l~~~~~~  413 (418)
T 2c81_A          373 LHYPVSERASGQSIVIHHA-ILLAEPSHLSLLVDAVAELARK  413 (418)
T ss_dssp             CCCHHHHHHHHHEEEEEGG-GGGSCHHHHHHHHHHHHHHHHT
T ss_pred             CCChHHHHHHhCEEEecCC-ccCCCHHHHHHHHHHHHHHHHh
Confidence            1         258999985 556 788999999999998765

>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*

Probab=99.90  E-value=4.8e-23  Score=210.07  Aligned_cols=344  Identities=12%  Similarity=-0.009  Sum_probs=213.7

Q ss_pred             CcccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEE-cCCchHHHHH
Q 037144           77 PNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVI-QGTTCEALLC  155 (502)
Q Consensus        77 p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~-t~ggt~a~~~  155 (502)
                      |..+.+.+++..+|..+.+.+....+........+|...++.+++++++++++|++...      .+++ |+|||+|+..
T Consensus        39 ~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~------~i~~~t~g~t~al~~  112 (398)
T 2fyf_A           39 PRDGRFGSGPSKVRLEQLQTLTTTAAALFGTSHRQAPVKNLVGRVRSGLAELFSLPDGY------EVILGNGGATAFWDA  112 (398)
T ss_dssp             CSSCBCCSSSCCCCHHHHHGGGTTTTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTC------EEEEEETCHHHHHHH
T ss_pred             cCCccccCCCCCCCHHHHHHHhhcCCCccCcCcCCHHHHHHHHHHHHHHHHHhCCCCCc------eEEEeCCchhHHHHH
Confidence            33344445544444445555444221211111235666777888999999999997422      5787 9999999988


Q ss_pred             HHHHHHHHHHHHhCccCCCCeEEEeCCCCchh-HHHHHHHc--CCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCC
Q 037144          156 TLTAARDRVLKKIGRENISKLVVYSSDQTHCA-FQKAAQIV--GIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAEL  232 (502)
Q Consensus       156 al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s-~~~aa~~~--Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~  232 (502)
                      ++.+...           ++ +++++...|.. +...+...  |.   +++.||++. + ..++. +    +++      
T Consensus       113 ~~~~l~~-----------~g-v~~v~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~-g-~~~~~-~----i~~------  164 (398)
T 2fyf_A          113 AAFGLID-----------KR-SLHLTYGEFSAKFASAVSKNPFVG---EPIIITSDP-G-SAPEP-Q----TDP------  164 (398)
T ss_dssp             HHHHTCS-----------SC-EEEEECSHHHHHHHHHHHHCTTSC---CCEEEECCT-T-CCCCC-C----CCT------
T ss_pred             HHHHhcC-----------CC-eEEEeCCHHHHHHHHHHHHhCCCC---ceEEEecCC-C-CCCCc-c----ccC------
Confidence            7776532           34 23334444532 33345666  66   888999873 2 23332 1    221      


Q ss_pred             ccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEE
Q 037144          233 IPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCL  312 (502)
Q Consensus       233 ~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~  312 (502)
                      ++.+|+++.++|++|.+.|+++|.++   +|+|+|+|+||+.+....+        +..+|+++.++||+++.|.++|++
T Consensus       165 ~~~~v~~~~~~nptG~~~~~~~i~~~---~~~~vivD~a~~~~~~~~~--------~~~~di~~~s~sK~~~~~gg~g~l  233 (398)
T 2fyf_A          165 SVDVIAWAHNETSTGVAVAVRRPEGS---DDALVVIDATSGAGGLPVD--------IAETDAYYFAPQKNFASDGGLWLA  233 (398)
T ss_dssp             TCSEEEEESEETTTTEECCCCCCTTC---C-CEEEEECTTTTTTSCCC--------GGGCSEEEECTTSTTCSCSSEEEE
T ss_pred             CCCEEEEeCcCCCcceecchHHhhhh---cCCeEEEEeccccCCcccC--------cccCcEEEEecCcccCCCCceEEE
Confidence            24578888999999999999999987   8999999999987654322        125899999999999888678888


Q ss_pred             EeeCchhhhhhhc------CCcccccCccCCCCCcccccCCCcccccCCCC-CCchHHHHHHHHhcHHH-HHHHHHHHHH
Q 037144          313 WVKDPSCLLSTLS------TNPQYLKNEATDQEPKEQEVGYKDWQITLCRR-FRSLKLWVVIRNFGVAN-LRNFIRSHVG  384 (502)
Q Consensus       313 ~~r~~~~l~~~~~------~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~g~~g-~~~~~~~~~~  384 (502)
                      ++++. .+.....      ..+.|+......     .... ..... .+.. ....++..+++.+..+| ++++.++..+
T Consensus       234 ~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~-~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~  305 (398)
T 2fyf_A          234 IMSPA-ALSRIEAIAATGRWVPDFLSLPIAV-----ENSL-KNQTY-NTPAIATLALLAEQIDWLVGNGGLDWAVKRTAD  305 (398)
T ss_dssp             EECHH-HHHHHHHHHHTTCCCCGGGCHHHHH-----HHHT-TTCCS-SCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHH
T ss_pred             EECHH-HHHHhhcccccCCCCCcEEehHHHh-----hhcc-cCCCC-CCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHH
Confidence            87654 2221110      012233211000     0000 00000 0101 11234556666655565 8899999999


Q ss_pred             HHHHHHHHHhcCCCeEEec-CC--Cee-EEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCc
Q 037144          385 MAKLFERLVTSDKRFEVAF-PR--NFS-LVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGK  460 (502)
Q Consensus       385 la~~l~~~l~~~~~~~l~~-~~--~~~-~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~  460 (502)
                      +++++.+.|+++|++++.. .+  ..+ +++|++++ +.                         +  ..++.++|.++|.
T Consensus       306 ~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~-------------------------~--~~~l~~~L~~~gI  357 (398)
T 2fyf_A          306 SSQRLYSWAQERPYTTPFVTDPGLRSQVVGTIDFVD-DV-------------------------D--AGTVAKILRANGI  357 (398)
T ss_dssp             HHHHHHHHHHHSTTEEESCCSGGGBCSSEEEEEECT-TS-------------------------C--HHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHcCCceeccCChhhcCCcEEEEECCC-CC-------------------------C--HHHHHHHHHHCCc
Confidence            9999999999998999874 23  356 77787742 11                         0  2467777777787


Q ss_pred             EEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHhC
Q 037144          461 VFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEAF  502 (502)
Q Consensus       461 ~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~~  502 (502)
                      .+.++....+..++|++++. .++++|+++++++|+++.+++
T Consensus       358 ~v~~g~~~~~~~~iRis~~~-~~t~e~i~~~~~~l~~~l~~~  398 (398)
T 2fyf_A          358 VDTEPYRKLGRNQLRVAMFP-AVEPDDVSALTECVDWVVERL  398 (398)
T ss_dssp             BCCSCCTTTCSSEEEEECCT-TSCHHHHHHHHHHHHHHHHTC
T ss_pred             EEecCcccCCCCEEEEEecC-CCCHHHHHHHHHHHHHHHHhC
Confidence            54332111234689999874 467789999999999987653

>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}

Probab=99.90  E-value=7.3e-24  Score=214.14  Aligned_cols=323  Identities=14%  Similarity=0.070  Sum_probs=206.5

Q ss_pred             HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144           90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG  169 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~  169 (502)
                      +..+.+.+...+...  .|..++...++|+.    +++++|.+         .+++++|||+|+..++.++.-.      
T Consensus        16 ~~~~~~a~~~~~~~~--~~~~~~~~~~l~~~----la~~~~~~---------~~i~~~sgt~al~~~l~~l~~~------   74 (373)
T 3frk_A           16 EYEIKFKFEEIYKRN--WFILGDEDKKFEQE----FADYCNVN---------YCIGCGNGLDALHLILKGYDIG------   74 (373)
T ss_dssp             HHHHHHHHHHHHHHT--CCSSSHHHHHHHHH----HHHHHTSS---------EEEEESCHHHHHHHHHHHTTCC------
T ss_pred             CHHHHHHHHHHHHCC--CccCCchHHHHHHH----HHHHhCCC---------eEEEeCCHHHHHHHHHHHcCCC------
Confidence            333444444444332  24455666666655    55666664         3799999999998887765211      


Q ss_pred             ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144          170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV  249 (502)
Q Consensus       170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i  249 (502)
                          +++.|+++..+|.++..+++..|+   +++.++++++ ++.+|+++|+++|++++      .+|+   +++++|.+
T Consensus        75 ----~gd~Vi~~~~~~~~~~~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~l~~~~------~~v~---~~n~~G~~  137 (373)
T 3frk_A           75 ----FGDEVIVPSNTFIATALAVSYTGA---KPIFVEPDIR-TYNIDPSLIESAITEKT------KAII---AVHLYGQP  137 (373)
T ss_dssp             ----TTCEEEEETTSCTHHHHHHHHHSC---EEEEECEETT-TTEECGGGTGGGCCTTE------EEEE---EECCTTCC
T ss_pred             ----CcCEEEECCCCcHHHHHHHHHcCC---EEEEEecccc-ccCcCHHHHHHhcCCCC------eEEE---EECCCcCc
Confidence                577899999999999999999999   9999999853 57999999999886533      3555   56689999


Q ss_pred             CChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEc--cCCcCCCCCcceEEEeeCchhhhhhhcCC
Q 037144          250 DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFN--PHKWLFTTLDCCCLWVKDPSCLLSTLSTN  327 (502)
Q Consensus       250 dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~--~hK~l~~p~~~g~~~~r~~~~l~~~~~~~  327 (502)
                      .|+++|.++|++||+++|+|+||+.+......  ..  + ...|.++++  .||+++.+...|+++.+++..... +.. 
T Consensus       138 ~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~--~~--~-~~~d~~~~S~~~~K~l~~~g~gg~~~~~~~~~~~~-~~~-  210 (373)
T 3frk_A          138 ADMDEIKRIAKKYNLKLIEDAAQAHGSLYKGM--KV--G-SLGDAAGFSFYPAKNLGSLGDGGAVVTNDKDLAEK-IKA-  210 (373)
T ss_dssp             CCHHHHHHHHHHHTCEEEEECTTCTTCEETTE--ET--T-SSSSEEEEECCTTSSSCCSSSCEEEEESCHHHHHH-HHH-
T ss_pred             ccHHHHHHHHHHcCCEEEEECCcccCCEECCE--ec--c-ccccEEEEeCcCCCccCccceeEEEEeCCHHHHHH-HHH-
Confidence            99999999999999999999999865542211  11  0 136777777  669997634456666655533221 110 


Q ss_pred             cccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCC-
Q 037144          328 PQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRN-  406 (502)
Q Consensus       328 ~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~-  406 (502)
                         +......     ..  +.  ....+..+....+.+++.....++++++.++..++++++.+.|++++ +++...+. 
T Consensus       211 ---~~~~g~~-----~~--~~--~~~~g~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~  277 (373)
T 3frk_A          211 ---LSNYGSE-----KK--YH--HIYKGFNSRLDELQAGFLRVKLKYLDKWNEERRKIAQKYIAGINNPN-VIIPVEADY  277 (373)
T ss_dssp             ---HHBTTCS-----BT--TB--CCSCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHCCCTT-EECCCCCTT
T ss_pred             ---HHhcCcc-----cC--Cc--cccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-eEeccCCCC
Confidence               0000000     00  00  00011122333444555555567788889999999999999999986 77643221 


Q ss_pred             --eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEee---eE-----------C-
Q 037144          407 --FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHA---IV-----------G-  469 (502)
Q Consensus       407 --~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~---~~-----------~-  469 (502)
                        .+.+.|.+....                             ...+.+.|.++|...-...   ..           . 
T Consensus       278 ~~~~~~~~~~~~~~-----------------------------~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~  328 (373)
T 3frk_A          278 AKHVWYTFVIRSEK-----------------------------RDELQKYLNNNGIGTLIHYPIPIHLQQAYKDLGFKTG  328 (373)
T ss_dssp             EECCCSSEEEEESS-----------------------------HHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTT
T ss_pred             CceeeEEEEEEeCC-----------------------------HHHHHHHHHHCCCCcccCcCCccccChHHHhcCCCCC
Confidence              112223322211                             2456777777786432111   00           0 


Q ss_pred             --------CEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144          470 --------GIYVLRFAAGNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       470 --------g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~  500 (502)
                              ....+|+++. +.++++||++++++|++...
T Consensus       329 ~~~~~~~~~~~~lrl~~~-~~~t~~di~~~~~~l~~~~~  366 (373)
T 3frk_A          329 NFPIAEKIANEILSIPIW-YGMKNEEIEYVIDKINAWKL  366 (373)
T ss_dssp             SSHHHHHHHHHEEEECCC-TTCCHHHHHHHHHHHHTCC-
T ss_pred             CCHHHHHHHhCEEEccCC-CCCCHHHHHHHHHHHHHHhh
Confidence                    0168999975 66788899999999987654

>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*

Probab=99.90  E-value=1.8e-23  Score=212.55  Aligned_cols=309  Identities=13%  Similarity=0.106  Sum_probs=202.8

Q ss_pred             cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144          110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ  189 (502)
Q Consensus       110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~  189 (502)
                      .++...++++.    +++++|.+         .+++++|||+|+..++.++.-.          +++.|+++..+|.++.
T Consensus        54 ~~~~~~~l~~~----la~~~~~~---------~~i~~~~gt~al~~~l~~~~~~----------~gd~vl~~~~~~~~~~  110 (391)
T 3dr4_A           54 VGRFIVEFEKA----FADYCGVK---------HAIACNNGTTALHLALVAMGIG----------PGDEVIVPSLTYIASA  110 (391)
T ss_dssp             CSHHHHHHHHH----HHHHHTCS---------EEEEESSHHHHHHHHHHHHTCC----------TTCEEEEESSSCTHHH
T ss_pred             CChHHHHHHHH----HHHHhCCC---------cEEEeCCHHHHHHHHHHHcCCC----------CcCEEEECCCchHHHH
Confidence            34555555555    56666665         3789999999998888766211          5778999999999999


Q ss_pred             HHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEee
Q 037144          190 KAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVD  269 (502)
Q Consensus       190 ~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVD  269 (502)
                      .+++..|+   +++.++++++ ++.+|+++|++++++++      .+|+   .++++|.+.|+++|+++|++||+++++|
T Consensus       111 ~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~~~~~~------~~v~---~~n~tG~~~~~~~i~~l~~~~~~~li~D  177 (391)
T 3dr4_A          111 NSVTYCGA---TPVLVDNDPR-TFNLDAAKLEALITPRT------KAIM---PVHLYGQICDMDPILEVARRHNLLVIED  177 (391)
T ss_dssp             HHHHHTTC---EEEEECBCTT-TCSBCGGGSGGGCCTTE------EEEC---CBCGGGCCCCHHHHHHHHHHTTCEEEEE
T ss_pred             HHHHHCCC---EEEEEecCcc-ccCcCHHHHHHhcCCCc------eEEE---EECCCCChhhHHHHHHHHHHcCCEEEEE
Confidence            99999999   9999999853 57999999999886432      3444   3568999999999999999999999999


Q ss_pred             cccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCc
Q 037144          270 AAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKD  349 (502)
Q Consensus       270 aA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~  349 (502)
                      +||+.+....+....   .+..+++++++.||+++++ ..|+++.+++.... .+.....+-...       ....    
T Consensus       178 ~a~~~g~~~~~~~~~---~~~di~~~S~s~~K~l~~g-~gg~~~~~~~~~~~-~~~~~~~~g~~~-------~~~~----  241 (391)
T 3dr4_A          178 AAEAVGATYRGKKSG---SLGDCATFSFFGNAIITTG-EGGMITTNDDDLAA-KMRLLRGQGMDP-------NRRY----  241 (391)
T ss_dssp             CTTCTTCEETTEETT---SSSSEEEEECBTTSSSCCB-SCEEEEESCHHHHH-HHHHHHBTTCCT-------TSTT----
T ss_pred             CcccccceECCeeec---ccCCEEEEECCCCCcCCcC-CeEEEEECCHHHHH-HHHHHHhcCCCC-------CCcc----
Confidence            999865544332111   1123455666688999763 45666665553322 111000000000       0000    


Q ss_pred             ccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC--C-----CeeEEEEEeecC-cchh
Q 037144          350 WQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP--R-----NFSLVCFRVTPS-AVMD  421 (502)
Q Consensus       350 ~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~--~-----~~~~v~f~~~~~-~~~~  421 (502)
                      +....+..+....+.+++.....++++++.++..++++++.+.|+++ ++++..+  +     ...++.+.+... +.  
T Consensus       242 ~~~~~g~~~~~~~l~aa~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--  318 (391)
T 3dr4_A          242 WFPIVGFNYRMTNIQAAIGLAQLERVDEHLAARERVVGWYEQKLARL-GNRVTKPHVALTGRHVFWMYTVRLGEGLST--  318 (391)
T ss_dssp             CCSSCCCBCBCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHGGG-TTSEECCCCCTTSCCCCSSEEEEECSSCSS--
T ss_pred             cccccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CccccCcCCCCCCcceeEEEEEEECCccch--
Confidence            01111222344455555555556778889999999999999999998 8887654  2     122345555431 10  


Q ss_pred             hhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeee-------E-------------CCEEEEEEEecCC
Q 037144          422 KLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAI-------V-------------GGIYVLRFAAGNS  481 (502)
Q Consensus       422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-------~-------------~g~~~lR~~~~~~  481 (502)
                                               ...++.+.|.++|..+..+..       +             .....+|+++. +
T Consensus       319 -------------------------~~~~l~~~L~~~GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~-~  372 (391)
T 3dr4_A          319 -------------------------TRDQVIKDLDALGIESRPVFHPMHIMPPYAHLATDDLKIAEACGVDGLNLPTH-A  372 (391)
T ss_dssp             -------------------------CHHHHHHHHHHTTCCCEECCCCGGGSGGGGGGCCTTCHHHHHHHHHEEEECCC-T
T ss_pred             -------------------------hHHHHHHHHHHCCCceeecCCccccChhhhhcCcCCChHHHHHHhCeEEccCC-C
Confidence                                     024677778788875432210       0             01358999874 6


Q ss_pred             CCcHHHHHHHHHHHHHHH
Q 037144          482 MTMESHVRAAWTVVQEHL  499 (502)
Q Consensus       482 ~t~~~di~~~~~~l~~~~  499 (502)
                      .++++||++++++|+++.
T Consensus       373 ~~t~edi~~~~~~l~~~l  390 (391)
T 3dr4_A          373 GLTEADIDRVIAALDQVL  390 (391)
T ss_dssp             TCCHHHHHHHHHHHHTTC
T ss_pred             CCCHHHHHHHHHHHHHHh
Confidence            677889999999998753

>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}

Probab=99.90  E-value=5e-24  Score=220.53  Aligned_cols=290  Identities=10%  Similarity=0.003  Sum_probs=190.7

Q ss_pred             HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcC
Q 037144          117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVG  196 (502)
Q Consensus       117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~G  196 (502)
                      ...++.+++++ +|.+.        ..++|+|+|+||..++.++..           +++.|+++..+|.++..++...|
T Consensus        58 ~~~~~~~~la~-~g~~~--------~v~~~~G~t~a~~~~~~a~~~-----------~gd~Vlv~~~~h~s~~~~~~~~G  117 (446)
T 2x3l_A           58 VILKSMKQVEK-HSDYD--------GYFLVNGTTSGILSVIQSFSQ-----------KKGDILMARNVHKSVLHALDISQ  117 (446)
T ss_dssp             HHHHHHHHHCS-CTTEE--------EEEESSHHHHHHHHHHHTTTT-----------SSSCEEECTTCCHHHHHHHHHHT
T ss_pred             HHHHHHHHHHh-cCCCc--------eEEEeCCHHHHHHHHHHHhcC-----------CCCEEEEecCccHHHHHHHHHcC
Confidence            45667788999 99863        478999999999888877643           67789999999999999999999


Q ss_pred             CCCCCEEEEecCCCCC----cccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccc
Q 037144          197 IDRKNIRAIKTTKSSS----YGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAY  272 (502)
Q Consensus       197 lg~~~v~~v~~~~~~~----~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~  272 (502)
                      +   +++.++...+++    +.+|+++|   +.++      +.+|+++. +|++|.+.|+++|+++|++||+|+|+|+||
T Consensus       118 ~---~~~~v~~~~~~~~~~~~~~d~~~l---~~~~------~~~v~~~~-~n~~G~~~~l~~I~~l~~~~~~~livDea~  184 (446)
T 2x3l_A          118 Q---EGHFIETHQSPLTNHYNKVNLSRL---NNDG------HKLVVLTY-PNYYGETFNVEEVIKSLHQLNIPVLIDEAH  184 (446)
T ss_dssp             C---CEEECEEEECTTTSSEEEEEC----------------CCEEEEES-SCTTSCCCCHHHHHHHHHHTTCCEEEECTT
T ss_pred             C---eEEEEeCeeccccCcCCCCCHHHH---cCCC------ceEEEEEC-CCCCeEecCHHHHHHHHHhcCCeEEEcchh
Confidence            9   999999822122    57898887   3322      33677777 566999999999999999999999999999


Q ss_pred             ccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccc
Q 037144          273 AGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQI  352 (502)
Q Consensus       273 g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~  352 (502)
                      ++...+.+...... . .++|+++.++||+++++.++|++++++...-...+.........                   
T Consensus       185 ~~~~~f~~~~~~~~-~-~g~Di~~~S~~K~l~~~~g~g~l~~~~~~i~~~~~~~~~~~~~~-------------------  243 (446)
T 2x3l_A          185 GAHFGLQGFPDSTL-N-YQADYVVQSFHKTLPALTMGSVLYIHKNAPYRENIIEYLSYFQT-------------------  243 (446)
T ss_dssp             CTTTTSTTSCCCGG-G-GTCSEEEECHHHHSSSCTTCEEEEEETTCTTHHHHHHHHHHHSC-------------------
T ss_pred             hhhhccCCCCCChH-H-cCCCEEEECCccccccccccEEEEEcCCcCCHHHHHHHHHHHcC-------------------
Confidence            87322222100111 1 15899999999999988899999997653210111000000000                   


Q ss_pred             cCCCCCC-chHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCC
Q 037144          353 TLCRRFR-SLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGT  431 (502)
Q Consensus       353 ~~sr~~~-al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~  431 (502)
                       ++.... ...+..+++.+...+.+++.++..++++++++.     +++++.+.....+++.+.+..             
T Consensus       244 -~s~~~~~~aal~~a~~~l~~~g~~~~~~~~~~l~~~l~~~-----g~~~~~~~~~~~l~i~~~~~~-------------  304 (446)
T 2x3l_A          244 -SSPSYLIMASLESAAQFYKTYDSTLFFAKRAQLIECLENK-----GFEMLQVDDPLKLLIKYEGFT-------------  304 (446)
T ss_dssp             -SSCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH-----TCEEEECSSTTEEEEECTTSC-------------
T ss_pred             -CCchHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHc-----CCEECcCCCCeEEEEEeCCcC-------------
Confidence             111111 123444555554445555778888888888776     688775432234555553211             


Q ss_pred             cccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          432 YDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       432 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                                      ..++.+.|.++|..+ ..   .+..++|++++. .++++++ +++++|+++.+.
T Consensus       305 ----------------~~~l~~~L~~~GI~v-~~---~g~~~iRi~~~~-~~t~e~i-~l~~aL~~~~~~  352 (446)
T 2x3l_A          305 ----------------GHDIQNWFMNAHIYL-EL---ADDYQALAILPL-WHHDDTY-LFDSLLRKIEDM  352 (446)
T ss_dssp             ----------------HHHHHHHHHHTTEEE-SE---ECSSCEEEECCC-CCTTCCC-CHHHHHHHHHTC
T ss_pred             ----------------HHHHHHHHHHCCCEE-Ee---cCCCEEEEEeec-CCCHHHH-HHHHHHHHHHHh
Confidence                            235667777777543 21   134689999864 4566689 999999988654

>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*

Probab=99.90  E-value=1.7e-22  Score=205.92  Aligned_cols=321  Identities=14%  Similarity=0.091  Sum_probs=210.2

Q ss_pred             HHHHHHHHHhhcCCC---CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHH
Q 037144           90 AGIVGEMLSSGFNVV---GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLK  166 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~---~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~  166 (502)
                      +..+.+.+...+...   ...|...++..++++.+.+|+    |.+.+       ..++|+|+++++..++.+...    
T Consensus        49 ~~~v~~a~~~~~~~~~~~~~~y~~~~~~~~l~~~la~~~----g~~~~-------~v~~~~g~~~al~~~~~~~~~----  113 (397)
T 2zyj_A           49 KEEAAEAAARILREKGEVALQYSPTEGYAPLRAFVAEWI----GVRPE-------EVLITTGSQQALDLVGKVFLD----  113 (397)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTSCCCTTCCHHHHHHHHHHH----TSCGG-------GEEEESHHHHHHHHHHHHHCC----
T ss_pred             HHHHHHHHHHHHHhcchhhhCCCCCCCCHHHHHHHHHHh----CCChh-------hEEEeccHHHHHHHHHHHhCC----
Confidence            445555555544321   124444445667777666555    66543       589999999999877776532    


Q ss_pred             HhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHH-HHhcCCccEEE-EEecCCc
Q 037144          167 KIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINL-DVEAELIPLFL-CATVGTT  244 (502)
Q Consensus       167 ~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~-~~~~g~~p~~V-v~t~gtt  244 (502)
                             +++.|++...+|.++...++..|.   +++.+|.++  + .+|+++|++++++ ++      .+| +.+.++|
T Consensus       114 -------~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~--~-~~d~~~l~~~l~~~~~------~~v~~~~~~~n  174 (397)
T 2zyj_A          114 -------EGSPVLLEAPSYMGAIQAFRLQGP---RFLTVPAGE--E-GPDLDALEEVLKRERP------RFLYLIPSFQN  174 (397)
T ss_dssp             -------TTCEEEEEESCCHHHHHHHHTTCC---EEEEEEEET--T-EECHHHHHHHHHHCCC------SCEEECCBSCT
T ss_pred             -------CCCEEEEeCCCcHHHHHHHHHcCC---EEEecCcCC--C-CCCHHHHHHHHhhcCC------eEEEECCCCcC
Confidence                   567788888899999999999999   999999875  2 3999999999976 22      244 5678899


Q ss_pred             cccccCChh---HHHHHHHHhCCEEEeecccccccccCc---cchhhhcCCC---CCCeeEEccCCcCCCCCcceEEEee
Q 037144          245 AITAVDPLK---PLCDVAKQFGIWVHVDAAYAGSACICP---EFRHFIDGVE---CVDSFSFNPHKWLFTTLDCCCLWVK  315 (502)
Q Consensus       245 ~~G~idpl~---eI~~i~~~~g~~lhVDaA~g~~~~~~~---~~~~~~~~~~---~aDsi~~~~hK~l~~p~~~g~~~~r  315 (502)
                      ++|.+-|.+   +|+++|++||+++++|++|+.+.....   ..... . ..   .-..++.++||+++....+|+++++
T Consensus       175 ptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~-~-~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~  252 (397)
T 2zyj_A          175 PTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFEL-A-REAGYPGVIYLGSFSKVLSPGLRVAFAVAH  252 (397)
T ss_dssp             TTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHH-H-HHHTCCCEEEEEESTTTTCGGGCCEEEECC
T ss_pred             CCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhh-C-cccCCCeEEEEecccccccccceeEEEecC
Confidence            999997754   899999999999999999987654221   11111 0 01   1226678899999833567888876


Q ss_pred             CchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cH-HHHHHHHHHHHHHHHHHHHH
Q 037144          316 DPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GV-ANLRNFIRSHVGMAKLFERL  392 (502)
Q Consensus       316 ~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~-~g~~~~~~~~~~la~~l~~~  392 (502)
                       +... +.+.......                   +. ++   ..+..+++...+  +. +.++++.+++.++++++.+.
T Consensus       253 -~~~~-~~l~~~~~~~-------------------~~-~~---~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~  307 (397)
T 2zyj_A          253 -PEAL-QKLVQAKQGA-------------------DL-HT---PMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHA  307 (397)
T ss_dssp             -HHHH-HHHHHHHHHH-------------------HS-SC---CHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -HHHH-HHHHHHHHhh-------------------cC-CC---CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence             3322 2221100000                   00 00   223333333333  22 45777888888999999999


Q ss_pred             Hhc-CC-CeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC-
Q 037144          393 VTS-DK-RFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG-  469 (502)
Q Consensus       393 l~~-~~-~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-  469 (502)
                      |++ .| ++++..+....++++.+... .                         +  ..++.+++.++|..+.++..+. 
T Consensus       308 L~~~~~~g~~~~~~~~g~~~~~~~~~~-~-------------------------~--~~~~~~~l~~~gi~v~~g~~f~~  359 (397)
T 2zyj_A          308 LDREVPKEVRYTRPKGGMFVWMELPKG-L-------------------------S--AEGLFRRALEENVAFVPGGPFFA  359 (397)
T ss_dssp             HHHHSCTTSEECCCSBSSEEEEECSTT-C-------------------------C--HHHHHHHHHHTTEEEEESGGGCT
T ss_pred             HHHHCCCCeEEccCCccEEEEEEcCCC-C-------------------------C--HHHHHHHHHHCCCEEechHHhcC
Confidence            987 57 68876544445566665321 0                         0  2467777778886554433331 


Q ss_pred             ---CEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          470 ---GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       470 ---g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                         +..++|++++..  ++++|+++++.|.++.++
T Consensus       360 ~~~~~~~iRis~~~~--~~~~i~~~~~~l~~~l~~  392 (397)
T 2zyj_A          360 NGGGENTLRLSYATL--DREGIAEGVRRLGRALKG  392 (397)
T ss_dssp             TSCCTTEEEEECSSS--CHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCeEEEEcCCC--CHHHHHHHHHHHHHHHHH
Confidence               356899998753  678999999999887654

>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*

Probab=99.90  E-value=2.6e-22  Score=203.44  Aligned_cols=292  Identities=11%  Similarity=0.032  Sum_probs=197.1

Q ss_pred             HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144          116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV  195 (502)
Q Consensus       116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~  195 (502)
                      ....++++.+++++|.+.         .+++++||+++..++.+...           ++++|+++...|.++..+++..
T Consensus        84 ~~~~~l~~~la~~~g~~~---------~i~~~sGt~a~~~~~~~~~~-----------~gd~v~~~~~~~~~~~~~~~~~  143 (384)
T 1bs0_A           84 VVHQALEEELAEWLGYSR---------ALLFISGFAANQAVIAAMMA-----------KEDRIAADRLSHASLLEAASLS  143 (384)
T ss_dssp             HHHHHHHHHHHHHHTCSE---------EEEESCHHHHHHHHHHHHCC-----------TTCEEEEETTCCHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHhCCCc---------EEEeCCcHHHHHHHHHHhCC-----------CCcEEEEcccccHHHHHHHHHc
Confidence            344556677777788752         46667779999887765432           5678889999999999999999


Q ss_pred             CCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccc
Q 037144          196 GIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGS  275 (502)
Q Consensus       196 Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~  275 (502)
                      |.   +++.+|.       +|+++|+++|++...   .+.+|+++.++|++|.+.|+++|.++|++||+++++|++|+.+
T Consensus       144 g~---~~~~~~~-------~d~~~l~~~l~~~~~---~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~  210 (384)
T 1bs0_A          144 PS---QLRRFAH-------NDVTHLARLLASPCP---GQQMVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTG  210 (384)
T ss_dssp             SS---EEEEECT-------TCHHHHHHHHHSCCS---SCEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTT
T ss_pred             CC---CEEEeCC-------CCHHHHHHHHHhcCC---CCeEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCcccc
Confidence            98   8888873       488999999875321   2457888889999999999999999999999999999999765


Q ss_pred             ccc-C-ccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCccccc
Q 037144          276 ACI-C-PEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQIT  353 (502)
Q Consensus       276 ~~~-~-~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~  353 (502)
                      .+. . ......+ + ...|+++.++||+++ |.| |+++++ +............|....                   
T Consensus       211 ~~~~~~~~~~~~~-~-~~~di~~~s~sK~~~-~~G-G~~~~~-~~~~~~l~~~~~~~~~~~-------------------  266 (384)
T 1bs0_A          211 VIGEQGRGSCWLQ-K-VKPELLVVTFGKGFG-VSG-AAVLCS-STVADYLLQFARHLIYST-------------------  266 (384)
T ss_dssp             TSSGGGCCHHHHT-T-CCCSEEEEESSSTTS-SCC-EEEEEC-HHHHHHHHHHCHHHHSSB-------------------
T ss_pred             eecCCCCchHHhc-C-CCCcEEEeeccchhh-ccC-cEEEeC-HHHHHHHHHhchhhhcCC-------------------
Confidence            432 0 1111111 1 257899999999998 444 777774 433322111111121110                   


Q ss_pred             CCCCCCch---HHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCC
Q 037144          354 LCRRFRSL---KLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNG  430 (502)
Q Consensus       354 ~sr~~~al---~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~  430 (502)
                         ....+   .+..+++.+...+.+++.++..++++++.+.|+++ ++++. ++..+++++.+..              
T Consensus       267 ---~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~--------------  327 (384)
T 1bs0_A          267 ---SMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDL-PFTLA-DSCSAIQPLIVGD--------------  327 (384)
T ss_dssp             ---CCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTS-SCEEC-SCCSSBCCEEEES--------------
T ss_pred             ---CCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhc-CCccc-CCCCCEEEEEeCC--------------
Confidence               11222   23334444321155788889999999999999988 78876 4555666666632              


Q ss_pred             CcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeE---CCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144          431 TYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIV---GGIYVLRFAAGNSMTMESHVRAAWTVVQEH  498 (502)
Q Consensus       431 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~---~g~~~lR~~~~~~~t~~~di~~~~~~l~~~  498 (502)
                                    .....++.+.|.++|..+.....+   .+..++|++++ ..++++++++++++|+++
T Consensus       328 --------------~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~~Ri~~~-~~~~~~~i~~~~~~l~~~  383 (384)
T 1bs0_A          328 --------------NSRALQLAEKLRQQGCWVTAIRPPTVPAGTARLRLTLT-AAHEMQDIDRLLEVLHGN  383 (384)
T ss_dssp             --------------HHHHHHHHHHHHHTTEECCEECTTSSCTTCEEECCBCC-TTCCHHHHHHHHHHHHHH
T ss_pred             --------------HHHHHHHHHHHHHCCcEEEeecCCCCCCCCceEEEEEc-CCCCHHHHHHHHHHHHhh
Confidence                          112346777777777643332211   23578999986 445777999999999875

>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}

Probab=99.90  E-value=1.4e-22  Score=207.04  Aligned_cols=327  Identities=9%  Similarity=0.001  Sum_probs=218.6

Q ss_pred             HHHHHHHHhhcCCC-CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144           91 GIVGEMLSSGFNVV-GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG  169 (502)
Q Consensus        91 ~~~~~~l~~~~n~~-~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~  169 (502)
                      ..+.+.+...+... ...|...++..++++.+.+|+.+.+|.+.+.    ....++|+|+++++..++.+...       
T Consensus        63 ~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~----~~~v~~t~G~~~al~~~~~~l~~-------  131 (404)
T 2o1b_A           63 QGIIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFYQRQYNVTLDK----EDEVCILYGTKNGLVAVPTCVIN-------  131 (404)
T ss_dssp             HHHHHHHHHHTTCHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCT----TTSEEEESSHHHHHHHHHHHHCC-------
T ss_pred             HHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC----cccEEEcCCcHHHHHHHHHHhcC-------
Confidence            34556666555332 2235444567889999999999999975210    01589999999999887776532       


Q ss_pred             ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144          170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV  249 (502)
Q Consensus       170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i  249 (502)
                          +++.|+++..+|.++..+++..|.   +++.+|+++ +++.+|+++|++++++++      .+|+++.++|++|.+
T Consensus       132 ----~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~-~~~~~d~~~l~~~l~~~~------~~v~l~~p~nptG~~  197 (404)
T 2o1b_A          132 ----PGDYVLLPDPGYTDYLAGVLLADG---KPVPLNLEP-PHYLPDWSKVDSQIIDKT------KLIYLTYPNNPTGST  197 (404)
T ss_dssp             ----TTCEEEEEESCCSSHHHHHHHTTC---EEEEEECCT-TTCCCCGGGSCHHHHHHE------EEEEECSSCTTTCCC
T ss_pred             ----CCCEEEEcCCCchhHHHHHHHCCC---EEEEeccCc-ccCcCCHHHHHHhhccCc------eEEEEcCCCCCCCcc
Confidence                567788888899999999999999   999999976 346789999999997543      377778899999999


Q ss_pred             CC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhc--CCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhh
Q 037144          250 DP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFID--GVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLST  323 (502)
Q Consensus       250 dp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~--~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~  323 (502)
                      -|   +++|+++|++||+++++|++|+.+.+.. .......  +....|.++.++||+++.| ..+|+++.+ +.... .
T Consensus       198 ~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~-~~~~~-~  274 (404)
T 2o1b_A          198 ATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDA-KNPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVGN-KDMIQ-A  274 (404)
T ss_dssp             CCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSS-CCCCGGGSTTHHHHEEEEEESTTTTTCGGGCCEEEEEC-HHHHH-H
T ss_pred             CCHHHHHHHHHHHHHcCCEEEEEccchhcccCC-CCCChhhcCCCCCCEEEEEecchhccCchhheEeEecC-HHHHH-H
Confidence            65   7889999999999999999998764321 1111111  0113467888999999744 457887764 33322 2


Q ss_pred             hcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 037144          324 LSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSDKRFEV  401 (502)
Q Consensus       324 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l  401 (502)
                      +.....+...                       ....+..+++...+  +.+.+++..++..++++++.+.|++. ++++
T Consensus       275 l~~~~~~~~~-----------------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~  330 (404)
T 2o1b_A          275 LKKYQTHTNA-----------------------GMFGALQDAAIYALNHYDDFLEEQSNVFKTRRDRFEAMLAKA-DLPF  330 (404)
T ss_dssp             HHHHHHHHCC-----------------------CCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHT-TCCE
T ss_pred             HHHHHhhccC-----------------------CCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc-CCee
Confidence            2111000000                       00223333333333  35678888888999999999999988 7887


Q ss_pred             ecCCCeeE-EEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeEC--CEEEEEEE
Q 037144          402 AFPRNFSL-VCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVG--GIYVLRFA  477 (502)
Q Consensus       402 ~~~~~~~~-v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lR~~  477 (502)
                      . ++..++ +++.++. ..                         +  ..++.+++. +.|..+.++..+.  +..++|++
T Consensus       331 ~-~~~~g~~~~~~~~~-~~-------------------------~--~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRis  381 (404)
T 2o1b_A          331 V-HAKGGIYVWLETPP-GY-------------------------D--SEQFEQFLVQEKSILVAPGKPFGENGNRYVRIS  381 (404)
T ss_dssp             E-CCCBSSEEEEECCT-TC-------------------------C--HHHHHHHHHHHHCEECEESGGGCGGGTTEEEEE
T ss_pred             c-CCCcceEEEEeCCC-CC-------------------------C--HHHHHHHHHHHCCEEEeCchhhCcCCCCeEEEE
Confidence            6 444454 4455532 11                         0  234566655 3576544433232  24689999


Q ss_pred             ecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          478 AGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       478 ~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      ++.   ++++|+++++.|.+++++
T Consensus       382 ~~~---~~e~l~~~l~~l~~~l~~  402 (404)
T 2o1b_A          382 LAL---DDQKLDEAAIRLTELAYL  402 (404)
T ss_dssp             CCS---CTTHHHHHHHHHHGGGGG
T ss_pred             EcC---CHHHHHHHHHHHHHHHHh
Confidence            874   456999999999988765

>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*

Probab=99.90  E-value=5.2e-22  Score=202.45  Aligned_cols=299  Identities=13%  Similarity=0.100  Sum_probs=198.4

Q ss_pred             HHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCC
Q 037144          118 ENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGI  197 (502)
Q Consensus       118 e~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Gl  197 (502)
                      ..++.+.+++++|.+.        ..++++ |+.+++.++.+....         .++++|+++...|.++..+++..|.
T Consensus        93 ~~~l~~~la~~~~~~~--------~i~~~s-G~~a~~~~~~~l~~~---------~~gd~Vl~~~~~~~~~~~~~~~~g~  154 (401)
T 2bwn_A           93 HRRLEAEIAGLHQKEA--------ALVFSS-AYNANDATLSTLRVL---------FPGLIIYSDSLNHASMIEGIKRNAG  154 (401)
T ss_dssp             HHHHHHHHHHHTTCSE--------EEEESC-HHHHHHHHHHHHHHH---------STTCEEEEETTCCHHHHHHHHHSCC
T ss_pred             HHHHHHHHHHHhCCCc--------EEEECC-cHHHHHHHHHHHhcC---------CCCCEEEECchhhHHHHHHHHHcCC
Confidence            3445666777888643        355555 555887776654321         0567888999999999999999999


Q ss_pred             CCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccc
Q 037144          198 DRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSAC  277 (502)
Q Consensus       198 g~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~  277 (502)
                         +++.+|.+       |+++|+++++....  ..+.+|+++.++|++|.+.|+++|.++|++||+++++|++|+.+.+
T Consensus       155 ---~~~~v~~~-------d~~~le~~l~~~~~--~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~  222 (401)
T 2bwn_A          155 ---PKRIFRHN-------DVAHLRELIAADDP--AAPKLIAFESVYSMDGDFGPIKEICDIAEEFGALTYIDEVHAVGMY  222 (401)
T ss_dssp             ---CEEEECTT-------CHHHHHHHHHHSCT--TSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTS
T ss_pred             ---eEEEEcCC-------CHHHHHHHHHhhcc--CCceEEEEecCcCCCCCcCCHHHHHHHHHHcCCEEEEecccccccc
Confidence               99999863       78999999875321  1356889999999999999999999999999999999999985432


Q ss_pred             cCccchhh--hcCC-CCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcC-CcccccCccCCCCCcccccCCCccccc
Q 037144          278 ICPEFRHF--IDGV-ECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLST-NPQYLKNEATDQEPKEQEVGYKDWQIT  353 (502)
Q Consensus       278 ~~~~~~~~--~~~~-~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~~~  353 (502)
                      . +.....  ..++ +..|.+..+++|+++.|.  |+++. ++... +.+.. ...+....                   
T Consensus       223 ~-~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~G--G~~~~-~~~~~-~~l~~~~~~~~~~~-------------------  278 (401)
T 2bwn_A          223 G-PRGAGVAERDGLMHRIDIFNGTLAKAYGVFG--GYIAA-SARMV-DAVRSYAPGFIFST-------------------  278 (401)
T ss_dssp             S-TTSCCHHHHHTCGGGCSEEEEESSSTTCSCC--EEEEE-CHHHH-HHHHHHCHHHHTSB-------------------
T ss_pred             C-CCCceeeeccCccccCcEEEeechhhccCCC--CEEec-CHHHH-HHHHHhCcCceecC-------------------
Confidence            1 111111  1122 246888889999998653  66655 33322 22211 11111110                   


Q ss_pred             CCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcc
Q 037144          354 LCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYD  433 (502)
Q Consensus       354 ~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~  433 (502)
                      .........+..+++.+...++.++.++..++++++.+.|+++ ++++. ++..++++|.+..                 
T Consensus       279 ~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~-----------------  339 (401)
T 2bwn_A          279 SLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKAL-GMPII-DHGSHIVPVVIGD-----------------  339 (401)
T ss_dssp             CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH-TCCBC-CCSSSCEEEECCC-----------------
T ss_pred             CCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHC-CCccc-CCCCCeEEEEeCC-----------------
Confidence            0001123344566766656677889999999999999999987 78776 4555677776632                 


Q ss_pred             cccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeE---CCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          434 QYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIV---GGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       434 ~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~---~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                                 .....++.+.|. +.|..+.+...+   .+..++|++++ ..++++||++++++|+++.++
T Consensus       340 -----------~~~~~~~~~~L~~~~gi~v~~~~~~~~~~~~~~iRis~~-~~~t~~~i~~~~~~l~~~~~~  399 (401)
T 2bwn_A          340 -----------PVHTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPS-PVHDLKQIDGLVHAMDLLWAR  399 (401)
T ss_dssp             -----------HHHHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEECCC-TTSCHHHHHHHHHHHHHHC--
T ss_pred             -----------hHHHHHHHHHHHhcCCEEEeecCCCCCCCCCceEEEEee-CCCCHHHHHHHHHHHHHHHHh
Confidence                       111345667775 567643322211   13468999986 446777999999999988664

>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}

Probab=99.90  E-value=5.2e-22  Score=200.69  Aligned_cols=323  Identities=13%  Similarity=0.070  Sum_probs=215.5

Q ss_pred             HHHHHHHHhhcCCC-CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144           91 GIVGEMLSSGFNVV-GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG  169 (502)
Q Consensus        91 ~~~~~~l~~~~n~~-~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~  169 (502)
                      ..+.+.+...+... ...|...++..++++.+.+|+.+.+|.+...    ....++|+|+++++..++.+..+       
T Consensus        41 ~~v~~a~~~~~~~~~~~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~----~~~v~~~~g~~~a~~~~~~~l~~-------  109 (376)
T 2dou_A           41 EAPLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGRYGVGLDP----RREALALIGSQEGLAHLLLALTE-------  109 (376)
T ss_dssp             HHHHHHHHHHTTCGGGSSCCCHHHHHHHHHHHHHHHHHHHSCCCCT----TTSEEEESSHHHHHHHHHHHHCC-------
T ss_pred             HHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC----CccEEEcCCcHHHHHHHHHHhcC-------
Confidence            44566666655432 2344443467889999999999888986210    01589999999999877766532       


Q ss_pred             ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144          170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV  249 (502)
Q Consensus       170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i  249 (502)
                          +++.|+++..+|.++..+++..|.   +++.+|++  +++.+|+++|++++++.+      .+|+++.++|++|.+
T Consensus       110 ----~gd~vl~~~p~y~~~~~~~~~~g~---~~~~~~~~--~~~~~d~~~l~~~l~~~~------~~v~l~~p~nptG~~  174 (376)
T 2dou_A          110 ----PEDLLLLPEVAYPSYFGAARVASL---RTFLIPLR--EDGLADLKAVPEGVWREA------KVLLLNYPNNPTGAV  174 (376)
T ss_dssp             ----TTCEEEEESSCCHHHHHHHHHTTC---EEEEECBC--TTSSBCGGGSCHHHHHHE------EEEEECSSCTTTCCC
T ss_pred             ----CCCEEEECCCCcHhHHHHHHHcCC---EEEEeeCC--CCCCCCHHHHHHhhccCc------eEEEECCCCCCcCcc
Confidence                567888888999999999999999   99999983  346799999999996543      477778899999999


Q ss_pred             CC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhc--CCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhh
Q 037144          250 DP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFID--GVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLST  323 (502)
Q Consensus       250 dp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~--~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~  323 (502)
                      -|   +++|+++|++||+++++|++|+.+.... .....+.  +....+.+..++||+++.| ..+|+++.+ +.... .
T Consensus       175 ~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~-~~~~~-~  251 (376)
T 2dou_A          175 ADWGYFEEALGLARKHGLWLIHDNPYVDQVYEG-EAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGS-EEALA-R  251 (376)
T ss_dssp             CCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSS-CCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEEC-HHHHH-H
T ss_pred             CCHHHHHHHHHHHHHcCCEEEEEccchhcccCC-CCCChhhcCCCCCcEEEEecchhhcCChhheeEEEecC-HHHHH-H
Confidence            66   7789999999999999999998765421 1111111  1124567788999999744 457887654 43322 2


Q ss_pred             hcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 037144          324 LSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSDKRFEV  401 (502)
Q Consensus       324 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l  401 (502)
                      +........                   .  +  ...+...++...+  +.+.+++..++..++++++.+.|++.  +++
T Consensus       252 l~~~~~~~~-------------------~--~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~--~~~  306 (376)
T 2dou_A          252 LERVKGVID-------------------F--N--QYAGVLRMGVEALKTPKEVVRGYARVYRERALGMAEALKGV--LSL  306 (376)
T ss_dssp             HHHHHHHHC-------------------C--C--SCHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHTTT--SEE
T ss_pred             HHHHHHhcc-------------------c--C--CCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHh--cCc
Confidence            211000000                   0  0  0122233333333  35678888889999999999999887  776


Q ss_pred             ecCCCeeE-EEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC--CEEEEEEEe
Q 037144          402 AFPRNFSL-VCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG--GIYVLRFAA  478 (502)
Q Consensus       402 ~~~~~~~~-v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lR~~~  478 (502)
                      . ++..++ +.+.++.. .                         +  ..++.+++.++|..+.++..+.  +..++|+++
T Consensus       307 ~-~~~~~~~~~~~~~~~-~-------------------------~--~~~~~~~l~~~gi~v~~g~~f~~~~~~~~Ris~  357 (376)
T 2dou_A          307 L-PPRATMYLWGRLPEG-V-------------------------D--DLEFGLRLVERGVALAPGRGFGPGGKGFVRIAL  357 (376)
T ss_dssp             C-CCCBSSEEEEECCTT-C-------------------------C--HHHHHHHHHHTTEECEEGGGGCGGGTTEEEEEC
T ss_pred             c-CCCeeEEEEEECCCC-C-------------------------C--HHHHHHHHHHCCEEEcCchhhCCCCCCeEEEEe
Confidence            5 344443 44555321 1                         0  2356777777886544433332  246899998


Q ss_pred             cCCCCcHHHHHHHHHHHHHHH
Q 037144          479 GNSMTMESHVRAAWTVVQEHL  499 (502)
Q Consensus       479 ~~~~t~~~di~~~~~~l~~~~  499 (502)
                      +.   ++++|+++++.|.++.
T Consensus       358 ~~---~~~~i~~~l~~l~~~l  375 (376)
T 2dou_A          358 VR---PLEELLEAAKRIREAL  375 (376)
T ss_dssp             CS---CHHHHHHHHHHHHHTC
T ss_pred             cC---CHHHHHHHHHHHHHHh
Confidence            63   6779999999998754

>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}

Probab=99.90  E-value=2.4e-23  Score=215.67  Aligned_cols=347  Identities=9%  Similarity=0.035  Sum_probs=222.7

Q ss_pred             HHHHHHHHHHhhcCC-CCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHH
Q 037144           89 VAGIVGEMLSSGFNV-VGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKK  167 (502)
Q Consensus        89 ~~~~~~~~l~~~~n~-~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~  167 (502)
                      +|..+.+.+...+.. ....|....+..++++++.+|+.+.+|.+...     ...++|+||++|+..++.+..+     
T Consensus        71 ~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~-----~~v~~t~G~~~al~~~~~~l~~-----  140 (447)
T 3b46_A           71 PPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIYNTELKA-----ENVTVTTGANEGILSCLMGLLN-----  140 (447)
T ss_dssp             CCHHHHHHHHHHTTSGGGGSCCCTTCCHHHHHHHHHHHTTTTTSCCCG-----GGEEEESHHHHHHHHHHHHHCC-----
T ss_pred             CCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCh-----hhEEEeCCHHHHHHHHHHHHcC-----
Confidence            345566777666654 23456555567899999999999988864321     2689999999999888877643     


Q ss_pred             hCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCC----------CcccCHHHHHHHHHHHHhcCCccEEE
Q 037144          168 IGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSS----------SYGLSAESVLSQINLDVEAELIPLFL  237 (502)
Q Consensus       168 ~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~----------~~~~d~~~Le~~i~~~~~~g~~p~~V  237 (502)
                            +++.|+++...|.++...++..|.   +++.+|+++++          ++.+|+++|+++|+++      +.+|
T Consensus       141 ------~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v  205 (447)
T 3b46_A          141 ------AGDEVIVFEPFFDQYIPNIELCGG---KVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSK------TKAV  205 (447)
T ss_dssp             ------TTCEEEEEESCCTTHHHHHHHTTC---EEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCCTT------EEEE
T ss_pred             ------CCCEEEEeCCCchhHHHHHHHcCC---EEEEEeCCCccccccccccccCcccCHHHHHHhhccC------CeEE
Confidence                  567888888999999999999999   99999986532          4689999999988633      3478


Q ss_pred             EEecCCcccccc---CChhHHHHHHHHhCCEEEeecccccccccCc--cchhhhcCCCCCCeeEEccCCcCC-CCCcceE
Q 037144          238 CATVGTTAITAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICP--EFRHFIDGVECVDSFSFNPHKWLF-TTLDCCC  311 (502)
Q Consensus       238 v~t~gtt~~G~i---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~--~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~  311 (502)
                      +++.++|++|.+   +++++|+++|++||+++++|++|+.+.+..+  .....-.+..+.|.++.++||+++ ....+|+
T Consensus       206 ~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~riG~  285 (447)
T 3b46_A          206 IINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTVGSAGKSFAATGWRIGW  285 (447)
T ss_dssp             EEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHHHHTTEEEEEEHHHHTTCTTSCCEE
T ss_pred             EEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCCCCcCHHHcCCCCCCcEEEEecCchhcCCcchhhEE
Confidence            888999999998   5799999999999999999999987543211  111100111257888999999997 4456888


Q ss_pred             EEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHH
Q 037144          312 LWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG-VANLRNFIRSHVGMAKLFE  390 (502)
Q Consensus       312 ~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~la~~l~  390 (502)
                      ++.+++.... .+.....+..                 +   ++......++..+++... .+.++++.+++.++++++.
T Consensus       286 ~~~~~~~l~~-~l~~~~~~~~-----------------~---~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~l~  344 (447)
T 3b46_A          286 VLSLNAELLS-YAAKAHTRIC-----------------F---ASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFT  344 (447)
T ss_dssp             EECSCHHHHH-HHHHHHHHHT-----------------S---SCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred             EEeCCHHHHH-HHHHHHhhcc-----------------C---CCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHH
Confidence            8874444332 2211000000                 0   000001122223343321 3457788889999999999


Q ss_pred             HHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh-cCcEEEEeeeEC
Q 037144          391 RLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV-SGKVFMTHAIVG  469 (502)
Q Consensus       391 ~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~  469 (502)
                      +.|+++ ++++..+....++++.+.....            +.....+.... ......++.+++.+ .|.++.++..+.
T Consensus       345 ~~L~~~-g~~~~~~~~g~~~~~~~~~~~~------------p~~~~~~~~~~-~~~~~~~~~~~l~~~~gV~v~pg~~f~  410 (447)
T 3b46_A          345 SIFDEL-GLPYTAPEGTYFVLVDFSKVKI------------PEDYPYPEEIL-NKGKDFRISHWLINELGVVAIPPTEFY  410 (447)
T ss_dssp             HHHHHH-TCCEECCSBSSEEEEECTTCCC------------CTTCCCCGGGS-SSCHHHHHHHHHHHHTCEECBCGGGGS
T ss_pred             HHHHHC-CCeecCCCeeEEEEEecccccC------------ccccccccccc-cCCCHHHHHHHHHHhCCEEEECchHhC
Confidence            999987 7887643333344555532100            00000000000 00012356666654 576544433331


Q ss_pred             -------CEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144          470 -------GIYVLRFAAGNSMTMESHVRAAWTVVQEH  498 (502)
Q Consensus       470 -------g~~~lR~~~~~~~t~~~di~~~~~~l~~~  498 (502)
                             +..++|++++.   ++++|+++++.|.++
T Consensus       411 ~~~~~~~~~~~iRls~~~---~~e~l~~~~~~l~~~  443 (447)
T 3b46_A          411 IKEHEKAAENLLRFAVCK---DDAYLENAVERLKLL  443 (447)
T ss_dssp             CGGGGGGGTTEEEEECCS---CHHHHHHHHHHGGGG
T ss_pred             CCCccCCCCCEEEEEEeC---CHHHHHHHHHHHHHH
Confidence                   24689999863   678999999999874

>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0

Probab=99.90  E-value=2.9e-21  Score=193.85  Aligned_cols=288  Identities=10%  Similarity=0.011  Sum_probs=199.9

Q ss_pred             HHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCC
Q 037144          120 IVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDR  199 (502)
Q Consensus       120 ~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~  199 (502)
                      ++++++++++|.+.+       ..++|+|||+++..++.++               +.|+++..+|.++..+++..|.  
T Consensus        65 ~l~~~la~~~~~~~~-------~i~~~~g~t~al~~~~~~~---------------d~vi~~~~~~~~~~~~~~~~g~--  120 (361)
T 3ftb_A           65 RLNKSIENYLKLKDI-------GIVLGNGASEIIELSISLF---------------EKILIIVPSYAEYEINAKKHGV--  120 (361)
T ss_dssp             HHHHHHHHHHTCCSC-------EEEEESSHHHHHHHHHTTC---------------SEEEEEESCCTHHHHHHHHTTC--
T ss_pred             HHHHHHHHHhCCCcc-------eEEEcCCHHHHHHHHHHHc---------------CcEEEecCChHHHHHHHHHcCC--
Confidence            345566777787654       5899999999997766543               3577888899999999999999  


Q ss_pred             CCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hhHHHHHHHHhCCEEEeeccccccc
Q 037144          200 KNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSA  276 (502)
Q Consensus       200 ~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~eI~~i~~~~g~~lhVDaA~g~~~  276 (502)
                       +++.+|++++  +.+++++|++++++ +      .+|+++.++|++|.+-|   +++|+++|++||+++++|++|+.+.
T Consensus       121 -~~~~~~~~~~--~~~~~~~l~~~l~~-~------~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~  190 (361)
T 3ftb_A          121 -SVVFSYLDEN--MCIDYEDIISKIDD-V------DSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFT  190 (361)
T ss_dssp             -EEEEEECCTT--SCCCHHHHHHHTTT-C------SEEEEETTBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECSSGGGT
T ss_pred             -eEEEeecCcc--cCCCHHHHHHhccC-C------CEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCCEEEEECcchhhc
Confidence             9999999864  47888999998865 3      37888899999999965   6677888889999999999998765


Q ss_pred             ccCccchhh-hcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccC
Q 037144          277 CICPEFRHF-IDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITL  354 (502)
Q Consensus       277 ~~~~~~~~~-~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~  354 (502)
                      .. ...... ..+......++.++||+++ .+...|++++.++............|                        
T Consensus       191 ~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~~~~~~~~~~~~~~~------------------------  245 (361)
T 3ftb_A          191 GD-PSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNKEIAAKIKAKQNPW------------------------  245 (361)
T ss_dssp             CC-TTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESCHHHHHHHHTTSCTT------------------------
T ss_pred             CC-cccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCCHHHHHHHHhhCCCC------------------------
Confidence            53 111000 1111123356678999997 44567777756655433221111100                        


Q ss_pred             CCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EecCCCeeEEEEEeecCcchhhhhhcccCCCc
Q 037144          355 CRRFRSLKLWVVIRNF-GVANLRNFIRSHVGMAKLFERLVTSDKRFE-VAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTY  432 (502)
Q Consensus       355 sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~la~~l~~~l~~~~~~~-l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~  432 (502)
                        ....+..+++...+ ..++++++.++..++++++.+.|+++|+++ +. ++..+++.+.+....              
T Consensus       246 --~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~--------------  308 (361)
T 3ftb_A          246 --NINCFAEMAAINCLKDTNYIEESLLWIKKERKRFIEELNKIGFIKRVF-SPHANFVLCRLENIS--------------  308 (361)
T ss_dssp             --CSCHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHSSSEEEEE-CCSSSEEEEEESSSC--------------
T ss_pred             --CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCCceec-CCCCeEEEEEcCCCC--------------
Confidence              01233444444444 246778889999999999999999999998 65 556667777664311              


Q ss_pred             ccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC--CEEEEEEEecCCCCcHHHHHHHHHHHHHHHHhC
Q 037144          433 DQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG--GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEAF  502 (502)
Q Consensus       433 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~~  502 (502)
                                     ..++.+.|.++|..+.++..+.  +..++|++++    +++++++++++|+++.+.+
T Consensus       309 ---------------~~~l~~~l~~~gi~v~~g~~~~~~~~~~iRis~~----~~~~~~~l~~~l~~~~~~l  361 (361)
T 3ftb_A          309 ---------------GEKLYDSLLKEDIVIRRCCNFIGLDDSFVRFAIK----DEKKNTKFLRALKGVENNL  361 (361)
T ss_dssp             ---------------HHHHHHHHHTTTEECEECTTSTTCCTTEEEEECC----CHHHHHHHHHHHHHHHHTC
T ss_pred             ---------------HHHHHHHHHHCCeEEeeCccCCCCCCCEEEEEcC----CHHHHHHHHHHHHHHHhcC
Confidence                           2467777888886544433332  3568999975    5668999999999887653

>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*

Probab=99.90  E-value=2.1e-22  Score=206.70  Aligned_cols=346  Identities=12%  Similarity=0.045  Sum_probs=221.9

Q ss_pred             HHHHHHHHHHhhcCCC--CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHH
Q 037144           89 VAGIVGEMLSSGFNVV--GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLK  166 (502)
Q Consensus        89 ~~~~~~~~l~~~~n~~--~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~  166 (502)
                      ++..+.+.+...+...  ...|....+..++++.+.+|+.+.+|.+...    ....++|+||++++..++.+...    
T Consensus        42 ~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~----~~~i~~~~g~~~a~~~~~~~~~~----  113 (422)
T 3fvs_A           42 PPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEIDP----LRNVLVTVGGYGALFTAFQALVD----  113 (422)
T ss_dssp             CCHHHHHHHHHHHHSCGGGGSCCCTTCCHHHHHHHHHHHHHHHTCCCCH----HHHEEEESHHHHHHHHHHHHHCC----
T ss_pred             CCHHHHHHHHHHHhCCCccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCC----CCcEEEECChHHHHHHHHHHHcC----
Confidence            3444555555555332  2355555567889999999999999975320    01589999999999888776533    


Q ss_pred             HhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCC----C------CCcccCHHHHHHHHHHHHhcCCccEE
Q 037144          167 KIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTK----S------SSYGLSAESVLSQINLDVEAELIPLF  236 (502)
Q Consensus       167 ~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~----~------~~~~~d~~~Le~~i~~~~~~g~~p~~  236 (502)
                             +++.|+++...|.++...++..|.   +++.+|+++    +      .++.+|+++|+++++++      +.+
T Consensus       114 -------~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~~~~------~~~  177 (422)
T 3fvs_A          114 -------EGDEVIIIEPFFDCYEPMTMMAGG---RPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSR------TKA  177 (422)
T ss_dssp             -------TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCCTT------EEE
T ss_pred             -------CCCEEEEcCCCchhhHHHHHHcCC---EEEEEecccccccccccccccCCCCCHHHHHhhcCCC------ceE
Confidence                   567788888899999999999999   999999875    2      25689999999988643      347


Q ss_pred             EEEecCCccccccC---ChhHHHHHHHHhCCEEEeecccccccccCccchhh--hcCCCCCCeeEEccCCcCCC-CCcce
Q 037144          237 LCATVGTTAITAVD---PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF--IDGVECVDSFSFNPHKWLFT-TLDCC  310 (502)
Q Consensus       237 Vv~t~gtt~~G~id---pl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~~-p~~~g  310 (502)
                      |+++.++|++|.+-   ++++|+++|++||+++++|++|+.+..........  +......+.+..+++|+++. ....|
T Consensus       178 v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G  257 (422)
T 3fvs_A          178 LVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVG  257 (422)
T ss_dssp             EEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCE
T ss_pred             EEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhcccccCcEEEEecchhccCCccceEE
Confidence            88889999999997   59999999999999999999998754432111111  11111334677789999974 46678


Q ss_pred             EEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh---------cHHHHHHHHHH
Q 037144          311 CLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF---------GVANLRNFIRS  381 (502)
Q Consensus       311 ~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---------g~~g~~~~~~~  381 (502)
                      +++.++. .+. .+........                 +      ....+..+++...+         ..+.++++.++
T Consensus       258 ~~~~~~~-~~~-~~~~~~~~~~-----------------~------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~  312 (422)
T 3fvs_A          258 WVLGPDH-IMK-HLRTVHQNSV-----------------F------HCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQA  312 (422)
T ss_dssp             EEECCHH-HHH-HHHHHHHTTT-----------------C------CCCHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHH
T ss_pred             EEEeCHH-HHH-HHHHHHhhcc-----------------C------CCCcHHHHHHHHHHhhccccccchHHHHHHHHHH
Confidence            8876543 222 1111000000                 0      00222223332222         24567888899


Q ss_pred             HHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh-cCc
Q 037144          382 HVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV-SGK  460 (502)
Q Consensus       382 ~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~  460 (502)
                      ..++++++.+.|++. ++++..+....++++.+.......          .+  . .....  .....++.+.+.+ .|.
T Consensus       313 ~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~----------~~--~-~~~~~--~~~~~~~~~~ll~~~gv  376 (422)
T 3fvs_A          313 MQRCRDHMIRSLQSV-GLKPIIPQGSYFLITDISDFKRKM----------PD--L-PGAVD--EPYDRRFVKWMIKNKGL  376 (422)
T ss_dssp             HHHHHHHHHHHHHTT-TCEEEBCSBSSEEEEECHHHHHHC----------CC--C-CCCTT--CCHHHHHHHHHHHHHCE
T ss_pred             HHHHHHHHHHHHHHc-CCeecCCCeeeEEEEechhhcccc----------cc--c-ccccc--cccHHHHHHHHHHhcCE
Confidence            999999999999998 888775544444444443210000          00  0 00000  0002244555443 476


Q ss_pred             EEEEeeeE-------CCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHhC
Q 037144          461 VFMTHAIV-------GGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEAF  502 (502)
Q Consensus       461 ~~~~~~~~-------~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~~  502 (502)
                      .+.++..+       .+..++|++++.   ++++|+++++.|+++.+++
T Consensus       377 ~v~~g~~f~~~~~~~~~~~~iRis~~~---~~e~i~~~l~~l~~~l~~l  422 (422)
T 3fvs_A          377 VAIPVSIFYSVPHQKHFDHYIRFCFVK---DEATLQAMDEKLRKWKVEL  422 (422)
T ss_dssp             ECEEGGGGSCHHHHTTSCSEEEEECCC---CHHHHHHHHHHHHHHHHCC
T ss_pred             EEeCcHHhcCCcCCCCCCCeEEEEecC---CHHHHHHHHHHHHHHHhhC
Confidence            54443333       246799999863   7789999999999987753

>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*

Probab=99.89  E-value=2e-22  Score=202.66  Aligned_cols=305  Identities=12%  Similarity=0.031  Sum_probs=195.7

Q ss_pred             ChhhHHHHHHHHHHHHHhcCCCCccCcCCCCc-EEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh--
Q 037144          111 SPAAVELENIVMDWLGQMLDLPKSFLFSGNGG-GVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA--  187 (502)
Q Consensus       111 ~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~-g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s--  187 (502)
                      +|...++.+++++++++++|.+.+.      . .++|+|||+++..++.+...           +++.|++....|++  
T Consensus        44 ~~~~~~~~~~~~~~la~~~g~~~~~------~~i~~t~g~t~a~~~~~~~l~~-----------~gd~vl~~~~~~~~~~  106 (362)
T 2c0r_A           44 GAVYEAVHNEAQARLLALLGNPTGY------KVLFIQGGASTQFAMIPMNFLK-----------EGQTANYVMTGSWASK  106 (362)
T ss_dssp             SHHHHHHHHHHHHHHHHHTTCCSSE------EEEEESSHHHHHHHHHHHHHCC-----------TTCEEEEEECSHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHhCCCCCc------EEEEECCCchHHHHHHHHhcCC-----------CCCeEEEEecCcHhHH
Confidence            5666778889999999999997531      3 46789999999877765532           55666666566666  


Q ss_pred             HHHHHHHcCCCCCCEEEEecCC--CCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc-cCChhHHHHHHHHhCC
Q 037144          188 FQKAAQIVGIDRKNIRAIKTTK--SSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA-VDPLKPLCDVAKQFGI  264 (502)
Q Consensus       188 ~~~aa~~~Glg~~~v~~v~~~~--~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~-idpl~eI~~i~~~~g~  264 (502)
                      +...++..|    +++.+|++.  +.+..+|.++++  |++      .+.+|++++++|+||. +.|+++|      +|+
T Consensus       107 ~~~~~~~~g----~~~~v~~~~~~~~~~~~~~~~~~--i~~------~t~~v~~~~~~n~tG~~~~~l~~i------~~~  168 (362)
T 2c0r_A          107 ALKEAKLIG----DTHVAASSEASNYMTLPKLQEIQ--LQD------NAAYLHLTSNETIEGAQFKAFPDT------GSV  168 (362)
T ss_dssp             HHHHHHHHS----CEEEEEECGGGTTCSCCCGGGCC--CCT------TEEEEEEESEETTTTEECSSCCCC------TTS
T ss_pred             HHHHHHHhC----CeEEEecccccccccCCCHHHcc--cCC------CcCEEEEeCCcCccceeccccccc------CCC
Confidence            335556554    578888762  111235665553  422      2458899999999999 4899998      899


Q ss_pred             EEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccc
Q 037144          265 WVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQE  344 (502)
Q Consensus       265 ~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~  344 (502)
                      |+|||+||+.+....+        +...|+++.++|||++ |.|+|++++++...  +.+....+++......     ..
T Consensus       169 ~vivD~a~~~~~~~~~--------~~~~d~~~~s~~K~~g-~~G~G~l~~~~~~~--~~l~~~~~~~~~~~~~-----~~  232 (362)
T 2c0r_A          169 PLIGDMSSDILSRPFD--------LNQFGLVYAGAQKNLG-PSGVTVVIVREDLV--AESPKHLPTMLRYDTY-----VK  232 (362)
T ss_dssp             CEEEECTTTTTSSCCC--------GGGCSEEEEETTTTTC-CSSCEEEEEEGGGS--SSCCTTSCGGGCHHHH-----HH
T ss_pred             EEEEEChhhccCCccc--------hhHCcEEEEecccccc-CcCcEEEEEcHHHH--hhccccCchHHhHHHH-----hh
Confidence            9999999987654322        1234999999999996 77899999875421  1121111111100000     00


Q ss_pred             cCCCcccccCCCC-CCchHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHhcCCCe-EEecCC---CeeEEEEEeecCc
Q 037144          345 VGYKDWQITLCRR-FRSLKLWVVIRNFGVA-NLRNFIRSHVGMAKLFERLVTSDKRF-EVAFPR---NFSLVCFRVTPSA  418 (502)
Q Consensus       345 ~~~~~~~~~~sr~-~~al~~~~~l~~~g~~-g~~~~~~~~~~la~~l~~~l~~~~~~-~l~~~~---~~~~v~f~~~~~~  418 (502)
                      ..    ...++-. .....+..+++.+... +++++.++..++++++.+.|++++++ ++..++   ...+++|.++.  
T Consensus       233 ~~----~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~--  306 (362)
T 2c0r_A          233 NN----SLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRSDMNITFRLAS--  306 (362)
T ss_dssp             TT----TCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSCGGGBCSSEEEEECSC--
T ss_pred             cc----CcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcCCccccCCChHHcCCcEEEEEcCC--
Confidence            00    0001111 1224455566655444 78999999999999999999998546 875422   24566776532  


Q ss_pred             chhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144          419 VMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEH  498 (502)
Q Consensus       419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~  498 (502)
                                                .....++.+.|.++|.++.++..  ....+|+|+++. ++++|++++++.|+++
T Consensus       307 --------------------------~~~~~~~~~~L~~~gi~~~~g~~--~~~~iRis~~~~-~~~e~i~~l~~~l~~~  357 (362)
T 2c0r_A          307 --------------------------EELEKEFVKASEQEGFVGLKGHR--SVGGLRASIYNA-VPYESCEALVQFMEHF  357 (362)
T ss_dssp             --------------------------HHHHHHHHHHHHHTTEESCBCCT--TTCSEEEECCTT-SCHHHHHHHHHHHHHH
T ss_pred             --------------------------cchHHHHHHHHHHCCCeeccCCC--CCCEEEEECCCC-CCHHHHHHHHHHHHHH
Confidence                                      11234677777778874332211  124699998754 5678999999999988


Q ss_pred             HHh
Q 037144          499 LEA  501 (502)
Q Consensus       499 ~~~  501 (502)
                      .++
T Consensus       358 ~~~  360 (362)
T 2c0r_A          358 KRS  360 (362)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            764

>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*

Probab=99.89  E-value=2.3e-22  Score=205.20  Aligned_cols=324  Identities=16%  Similarity=0.081  Sum_probs=206.5

Q ss_pred             HHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCc
Q 037144           91 GIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGR  170 (502)
Q Consensus        91 ~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~  170 (502)
                      ..+.+.+...+...  .|..++...+++    +.+++++|.+         ..+++++||+|+..++.+++-.       
T Consensus        44 ~~v~~a~~~~~~~~--~y~~~~~~~~l~----~~la~~~~~~---------~~v~~~~Gt~a~~~~l~~~~~~-------  101 (399)
T 2oga_A           44 AETDAAIARVLDSG--RYLLGPELEGFE----AEFAAYCETD---------HAVGVNSGMDALQLALRGLGIG-------  101 (399)
T ss_dssp             HHHHHHHHHHHHHT--CCSSSHHHHHHH----HHHHHHTTSS---------EEEEESCHHHHHHHHHHHTTCC-------
T ss_pred             HHHHHHHHHHHhcC--CCCCchhHHHHH----HHHHHHHCCC---------eEEEecCHHHHHHHHHHHhCCC-------
Confidence            34445555444332  344445555555    5566777765         3688889999998887765211       


Q ss_pred             cCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC
Q 037144          171 ENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD  250 (502)
Q Consensus       171 ~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id  250 (502)
                         +++.|+++..+|.++..+++..|+   +++.+|++++ ++.+|+++|+++|+++      +.+|+   .++++|.+.
T Consensus       102 ---~gd~vl~~~~~~~~~~~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~i~~~------~~~v~---~~n~tG~~~  165 (399)
T 2oga_A          102 ---PGDEVIVPSHTYIASWLAVSATGA---TPVPVEPHED-HPTLDPLLVEKAITPR------TRALL---PVHLYGHPA  165 (399)
T ss_dssp             ---TTCEEEEESSSCTHHHHHHHHTTC---EEEEECBCSS-SSSBCHHHHHHHCCTT------EEEEC---CBCGGGCCC
T ss_pred             ---CcCEEEECCCccHHHHHHHHHCCC---EEEEEecCCC-CCCcCHHHHHHhcCCC------CeEEE---EeCCcCCcc
Confidence               567888899999999999999999   9999999753 4789999999998643      23454   357899999


Q ss_pred             ChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccC--CcCCCCCcceEEEeeCchhhhhhhcCCc
Q 037144          251 PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPH--KWLFTTLDCCCLWVKDPSCLLSTLSTNP  328 (502)
Q Consensus       251 pl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~h--K~l~~p~~~g~~~~r~~~~l~~~~~~~~  328 (502)
                      |+++|.++|+++|+++++|++|+.+....  ... +.  ...|.+++++|  |+++.|..+|+++.+++.......... 
T Consensus       166 ~l~~i~~l~~~~~~~li~Dea~~~g~~~~--~~~-~~--~~~di~~~S~~~sK~~~~~G~~g~~~~~~~~~~~~l~~~~-  239 (399)
T 2oga_A          166 DMDALRELADRHGLHIVEDAAQAHGARYR--GRR-IG--AGSSVAAFSFYPGKNLGCFGDGGAVVTGDPELAERLRMLR-  239 (399)
T ss_dssp             CHHHHHHHHHHHTCEECEECTTCTTCEET--TEE-TT--CTTCEEEEECCTTSSSCCSSCCEEEEESCHHHHHHHHHHH-
T ss_pred             CHHHHHHHHHHcCCEEEEECcccccCccC--Cee-cc--cccCEEEEeCCCCccCCcCCceEEEEeCCHHHHHHHHHHH-
Confidence            99999999999999999999997654321  111 11  12588999985  999865456666665554432211000 


Q ss_pred             ccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCC-e
Q 037144          329 QYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRN-F  407 (502)
Q Consensus       329 ~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~-~  407 (502)
                      .+   ...        ..+.........+...+.+++++..+  +.+.++.++..++++++.+.|+++|++++...+. .
T Consensus       240 ~~---g~~--------~~~~~~~~g~~~~~~~~~~a~~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~  306 (399)
T 2oga_A          240 NY---GSR--------QKYSHETKGTNSRLDEMQAAVLRIRL--AHLDSWNGRRSALAAEYLSGLAGLPGIGLPVTAPDT  306 (399)
T ss_dssp             BT---TCS--------STTCCCSCCCBCCCCHHHHHHHHHHH--HTHHHHHHHHHHHHHHHHHHTTTCTTCBCCCCCTTE
T ss_pred             hc---Ccc--------ccccccccccCCCcCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhccCCCccccCCCCCC
Confidence            00   000        00000011111233455555554433  4456777888899999999999988888754332 2


Q ss_pred             eEE--EEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC----------C-----
Q 037144          408 SLV--CFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG----------G-----  470 (502)
Q Consensus       408 ~~v--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~----------g-----  470 (502)
                      +.+  .|......                             ..++.+.|.++|..+.......          +     
T Consensus       307 ~~~~~~~~~~~~~-----------------------------~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~  357 (399)
T 2oga_A          307 DPVWHLFTVRTER-----------------------------RDELRSHLDARGIDTLTHYPVPVHLSPAYAGEAPPEGS  357 (399)
T ss_dssp             ECCCSSEEEECSS-----------------------------HHHHHHHHHHTTBCCBCSCSSCGGGSHHHHTTSCCTTS
T ss_pred             cceeEEEEEECCC-----------------------------HHHHHHHHHHCCCceecCCCCccccchhhcccCCCCCC
Confidence            211  23332211                             2356677777786432211000          0     


Q ss_pred             --------EEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          471 --------IYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       471 --------~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                              ..++|+++. ..++++|+++++++|+++.++
T Consensus       358 ~p~~~~~~~~~lRi~~~-~~~t~edi~~~~~~l~~~~~~  395 (399)
T 2oga_A          358 LPRAESFARQVLSLPIG-PHLERPQALRVIDAVREWAER  395 (399)
T ss_dssp             CHHHHHHHHHEEEECCS-TTCCHHHHHHHHHHHHHHHHS
T ss_pred             ChhHHHHHhCEEEccCC-CCCCHHHHHHHHHHHHHHHHH
Confidence                    258999975 567788999999999998765

>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...

Probab=99.89  E-value=7e-22  Score=201.50  Aligned_cols=329  Identities=11%  Similarity=0.069  Sum_probs=209.8

Q ss_pred             HHHHHHHHHhhcC-CCCcc------cccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHH
Q 037144           90 AGIVGEMLSSGFN-VVGLD------WISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARD  162 (502)
Q Consensus        90 ~~~~~~~l~~~~n-~~~~~------~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~  162 (502)
                      +..+.+.+...+. .....      |...+...++|+.+++++++++|.+..        .+++++||+|+..++.++..
T Consensus        36 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~g~~~~--------~i~~~sGt~a~~~a~~~~~~  107 (405)
T 2vi8_A           36 SRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLFGAEHA--------NVQPHSGAQANMAVYFTVLE  107 (405)
T ss_dssp             CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEE--------ECCCSSHHHHHHHHHHHHCC
T ss_pred             CHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCce--------EEEecCcHHHHHHHHHHhcC
Confidence            4455666665553 22111      223456778998899999999998742        35456669999888877632


Q ss_pred             HHHHHhCccCCCCeEEEeCCCCchhHHH-H--HHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEE
Q 037144          163 RVLKKIGRENISKLVVYSSDQTHCAFQK-A--AQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCA  239 (502)
Q Consensus       163 ~~~~~~~~~~~~~~~v~~s~~~H~s~~~-a--a~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~  239 (502)
                                 +++.|+++...|.++.. .  +...|.+. .++.+++++ .++.+|+++|++++++..     +.+|++
T Consensus       108 -----------~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~-~~~~~d~~~l~~~i~~~~-----~~~v~~  169 (405)
T 2vi8_A          108 -----------HGDTVLGMNLSHGGHLTHGSPVNFSGVQY-NFVAYGVDP-ETHVIDYDDVREKARLHR-----PKLIVA  169 (405)
T ss_dssp             -----------TTCEEEEECGGGTCCTTTTCTTSHHHHHS-EEEEECBCT-TTCSBCHHHHHHHHHHHC-----CSEEEE
T ss_pred             -----------CCCEEEEecccccchhcccchhhhcccee-EEEeccccc-ccCCcCHHHHHHHHHhcC-----CeEEEE
Confidence                       56778888888877643 1  12333211 566777653 257899999999997621     224554


Q ss_pred             ecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchh
Q 037144          240 TVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSC  319 (502)
Q Consensus       240 t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~  319 (502)
                      + + +..|...|+++|.++|++||+++|+|++|+.+....+...   ..+..+|+++.++||++++|.| |+++++ +..
T Consensus       170 ~-~-~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~---~~~~~~di~~~s~sK~~~g~~g-G~~~~~-~~~  242 (405)
T 2vi8_A          170 A-A-AAYPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHP---NPVPYAHFVTTTTHKTLRGPRG-GMILCQ-EQF  242 (405)
T ss_dssp             C-C-SSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSC---CSTTTCSEEEEESSSTTCCCSC-EEEEEC-HHH
T ss_pred             e-C-CCCCccCCHHHHHHHHHHcCCEEEEEccccccccccCcCC---CccccCCEEEEeccccCCCCCC-eEEEEc-HHH
Confidence            3 2 3457777999999999999999999999985443322111   1234689999999999987777 888775 333


Q ss_pred             hhhhhcCC-cccccCccCCCCCcccccCCCcccccCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 037144          320 LLSTLSTN-PQYLKNEATDQEPKEQEVGYKDWQITLCRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK  397 (502)
Q Consensus       320 l~~~~~~~-~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~  397 (502)
                      . +.+... ..+..                     ++.. .....+.++++.+..++++++.++..++++++.+.|+++ 
T Consensus       243 ~-~~l~~~~~~~~~---------------------~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-  299 (405)
T 2vi8_A          243 A-KQIDKAIFPGIQ---------------------GGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNE-  299 (405)
T ss_dssp             H-HHHHHHHTTTTC---------------------SSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             H-HHHHhhhccccc---------------------CCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-
Confidence            2 222110 01100                     0000 111233345555444688899999999999999999998 


Q ss_pred             CeEEecCC-CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEee------eECC
Q 037144          398 RFEVAFPR-NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHA------IVGG  470 (502)
Q Consensus       398 ~~~l~~~~-~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~------~~~g  470 (502)
                      ++++..++ ..+++++.+...+.                           ....+.+.|.+.|..+..+.      ...+
T Consensus       300 g~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~  352 (405)
T 2vi8_A          300 GFTLVSGGTDNHLLLVDLRPQQL---------------------------TGKTAEKVLDEVGITVNKNTIPYDPESPFV  352 (405)
T ss_dssp             TCEEGGGSCSSSEEEEECGGGTC---------------------------CHHHHHHHHHHHTEECEEECCTTCSSCTTT
T ss_pred             CCeEecCCCCceEEEEEccCCCC---------------------------CHHHHHHHHHHcCceeccCcCccccCCCCC
Confidence            89987542 45667776643110                           02345666666686543331      0112


Q ss_pred             EEEEEEEecCC---CCcHHHHHHHHHHHHHHHHh
Q 037144          471 IYVLRFAAGNS---MTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       471 ~~~lR~~~~~~---~t~~~di~~~~~~l~~~~~~  501 (502)
                      ..++|+++..+   ..+++++++++++|+++.++
T Consensus       353 ~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~  386 (405)
T 2vi8_A          353 TSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLKN  386 (405)
T ss_dssp             CSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHTC
T ss_pred             CCceEEeeeeeeecCCCHHHHHHHHHHHHHHHhc
Confidence            45799998642   34688999999999987653

>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A

Probab=99.89  E-value=6.5e-22  Score=205.43  Aligned_cols=335  Identities=13%  Similarity=0.049  Sum_probs=194.0

Q ss_pred             HHHHHHHHHhhc-CCCCcc------cccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHH
Q 037144           90 AGIVGEMLSSGF-NVVGLD------WISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARD  162 (502)
Q Consensus        90 ~~~~~~~l~~~~-n~~~~~------~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~  162 (502)
                      +..+.+.+...+ |.....      |...+...++|+.+++++++++|.+....    +..++++|||+||+.++.+..+
T Consensus        67 ~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~~~a~l~g~~~~~~----~~~v~~~sGt~An~~al~al~~  142 (490)
T 2a7v_A           67 SRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQW----GVNVQPYSGSPANLAVYTALLQ  142 (490)
T ss_dssp             CHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHHHTTCCTTTE----EEECCCSSHHHHHHHHHHHHCC
T ss_pred             CHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHHHHHHHcCCCcccC----ceEEeCCchHHHHHHHHHHHcC
Confidence            444555554443 444322      23334456899999999999999976310    0135566899999888876643


Q ss_pred             HHHHHhCccCCCCeEEEeCCCCchhHH--------HHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCcc
Q 037144          163 RVLKKIGRENISKLVVYSSDQTHCAFQ--------KAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIP  234 (502)
Q Consensus       163 ~~~~~~~~~~~~~~~v~~s~~~H~s~~--------~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p  234 (502)
                                 +++.|+++...|.+..        +.+.+.|... .++.+++++ +++.+|+++|++++.+..     |
T Consensus       143 -----------pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~-~~~~~~vd~-~~~~iD~d~le~~l~~~~-----~  204 (490)
T 2a7v_A          143 -----------PHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFF-ESMPYKLNP-KTGLIDYNQLALTARLFR-----P  204 (490)
T ss_dssp             -----------SCEECCC--------------------------------CCBCT-TTCSBCHHHHHHHHHHHC-----C
T ss_pred             -----------CCCEecccCccccccccchhhhcchhHHHcCCeE-EEEeccccc-ccCCcCHHHHHHHHhhcC-----C
Confidence                       7889998887775421        1334556511 233444553 357999999999997532     3


Q ss_pred             EEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEe
Q 037144          235 LFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWV  314 (502)
Q Consensus       235 ~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~  314 (502)
                      .+|+++.  +..|...|+++|+++|++||+++|+|+||+.+..........+   ..+|++++++||+|++|.| |++++
T Consensus       205 klIi~~~--s~~~~~~dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~---~~aDiv~~S~hK~l~Gp~G-G~i~~  278 (490)
T 2a7v_A          205 RLIIAGT--SAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPF---KHADIVTTTTHKTLRGARS-GLIFY  278 (490)
T ss_dssp             SEEEECC--SSCCSCCCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGG---GTCSEEEEESSGGGCSCSC-EEEEE
T ss_pred             cEEEEcC--CCCCCcccHHHHHHHHHHcCCEEEEccccccccccCCcCCCCC---CCCCEEEECCcccCccccc-hheee
Confidence            3565543  3456678999999999999999999999876544322211112   3789999999999988865 88887


Q ss_pred             eCchh-------------hhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCC-chHHHHHHHHhcHHHHHHHHH
Q 037144          315 KDPSC-------------LLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFR-SLKLWVVIRNFGVANLRNFIR  380 (502)
Q Consensus       315 r~~~~-------------l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~-al~~~~~l~~~g~~g~~~~~~  380 (502)
                      ++...             +.+.+.   ..++.                 +.+++.... ..++..+++..-.+.+.++.+
T Consensus       279 ~~~~~~~~~~~~~~~~~~l~~~i~---~~~~~-----------------g~qggp~~~~iaAla~Al~~~~~~~~~~~~~  338 (490)
T 2a7v_A          279 RKGVKAVDPKTGREIPYTFEDRIN---FAVFP-----------------SLQGGPHNHAIAAVAVALKQACTPMFREYSL  338 (490)
T ss_dssp             ECSEEEEETTTEEEEECCCHHHHH---HHHTT-----------------TTCCSCCHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred             ccchhcccccccchhhHHHHHHHH---HHhcc-----------------cCCCCchHHHHHHHHHHHHHHhhhhHHHHHH
Confidence            76410             111100   00100                 111111111 123333444433345688889


Q ss_pred             HHHHHHHHHHHHHhcCCCeEEecC-CCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcC
Q 037144          381 SHVGMAKLFERLVTSDKRFEVAFP-RNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSG  459 (502)
Q Consensus       381 ~~~~la~~l~~~l~~~~~~~l~~~-~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g  459 (502)
                      +..+++++|++.|++. |++++.. ....++.+.+.+.+..                           ..++.+.|.+.|
T Consensus       339 ~~~~na~~L~~~L~~~-G~~v~~~~t~t~lv~vdl~~~g~~---------------------------~~~~~~~L~~~G  390 (490)
T 2a7v_A          339 QVLKNARAMADALLER-GYSLVSGGTDNHLVLVDLRPKGLD---------------------------GARAERVLELVS  390 (490)
T ss_dssp             HHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECTTTTCC---------------------------HHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHc-CcEEecCCCCCeEEEEEeCCCCCC---------------------------HHHHHHHHHhCC
Confidence            9999999999999997 8999743 3456676666543210                           134555565667


Q ss_pred             cEEEEeeeEC-----CEEEEEEEec---CCCCcHHHHHHHHHHHHHHHH
Q 037144          460 KVFMTHAIVG-----GIYVLRFAAG---NSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       460 ~~~~~~~~~~-----g~~~lR~~~~---~~~t~~~di~~~~~~l~~~~~  500 (502)
                      +.+-..+...     ....||++..   +...+++|++++.+.|.+++.
T Consensus       391 I~v~~~~~p~d~~p~~~~~iRig~~a~t~~g~~~~d~~~~~~~i~~~l~  439 (490)
T 2a7v_A          391 ITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVN  439 (490)
T ss_dssp             EECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred             eEEecCccCCCCCCCCCCceEecccccccCCCCHHHHHHHHHHHHHHHH
Confidence            6432221111     1356999652   233577899999999988754

>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}

Probab=99.89  E-value=1.1e-21  Score=200.92  Aligned_cols=303  Identities=9%  Similarity=0.048  Sum_probs=193.3

Q ss_pred             HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHH----
Q 037144          117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAA----  192 (502)
Q Consensus       117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa----  192 (502)
                      ...++.+++++++|.+         .+++|+|||+|+..++.++..           +++.|+++...|.+.....    
T Consensus        57 ~~~~l~~~la~~~g~~---------~~~~~~~gt~a~~~al~~l~~-----------~gd~vi~~~~~~~~~~~~~~~~~  116 (412)
T 2cb1_A           57 TAKALEERLKALEGAL---------EAVVLASGQAATFAALLALLR-----------PGDEVVAAKGLFGQTIGLFGQVL  116 (412)
T ss_dssp             HHHHHHHHHHHHHTCS---------EEEEESSHHHHHHHHHHTTCC-----------TTCEEEEETTCCHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHhCCC---------cEEEECCHHHHHHHHHHHHhC-----------CCCEEEEeCCCchhHHHHHHHHH
Confidence            3445667788888864         378999999999888876532           5678888999998876654    


Q ss_pred             HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccc
Q 037144          193 QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAY  272 (502)
Q Consensus       193 ~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~  272 (502)
                      +..|+   +++.++.        |+++|+++|+++      +.+|+++.++|++|.+.|+++|+++|++||+++|+|++|
T Consensus       117 ~~~g~---~~~~~~~--------~~~~l~~~i~~~------~~~v~~~~~~n~~G~~~~l~~i~~l~~~~~~~li~D~~~  179 (412)
T 2cb1_A          117 SLMGV---TVRYVDP--------EPEAVREALSAK------TRAVFVETVANPALLVPDLEALATLAEEAGVALVVDNTF  179 (412)
T ss_dssp             TTTTC---EEEEECS--------SHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGG
T ss_pred             HHcCC---EEEEECC--------CHHHHHHHhccC------CeEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCC
Confidence            34677   7888875        388899888653      347888999999999999999999999999999999999


Q ss_pred             ccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc-ceEEEeeCchh-hhhhhcCCcccccCccC-CCCCccccc-CCC
Q 037144          273 AGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD-CCCLWVKDPSC-LLSTLSTNPQYLKNEAT-DQEPKEQEV-GYK  348 (502)
Q Consensus       273 g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~-~g~~~~r~~~~-l~~~~~~~~~yl~~~~~-~~~~~~~~~-~~~  348 (502)
                      +.+........      .++|+++.++||++++|.+ .|++++.++.. ........++....... ......... ...
T Consensus       180 ~~~~~~~~~~~------~~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~r  253 (412)
T 2cb1_A          180 GAAGALCRPLA------WGAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWEALRARCFPERVR  253 (412)
T ss_dssp             GTTTTSCCGGG------GTCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HHHHGGGHHHHHHH
T ss_pred             ccccccCCccc------cCCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchhhccchHHHHHHHH
Confidence            87622221111      1689999999999988876 77777765321 00000000000000000 000000000 000


Q ss_pred             ccc-ccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-----------------CeeEE
Q 037144          349 DWQ-ITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR-----------------NFSLV  410 (502)
Q Consensus       349 ~~~-~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~-----------------~~~~v  410 (502)
                      ..+ ...+....+...|..+..  .+.+.+++++..++++++.+.|.+.++++.+..|                 ..+++
T Consensus       254 ~~~~~~~g~~~~~~~a~~~~~~--l~~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~~~~~~~~~~~~~~iv  331 (412)
T 2cb1_A          254 TLGLSLCGMALSPFNAYLLFQG--LETVALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPAHRNARKYLASGGPIL  331 (412)
T ss_dssp             HHHTTTTCCCCCHHHHHHHHHH--GGGHHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTTHHHHHHHCSSSCSEE
T ss_pred             HHHHHhcCCCCChHHhHHHHcC--CchHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHHhCCCCceEE
Confidence            001 001112344555555543  3556777888889999999999999999855211                 35688


Q ss_pred             EEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEee--------eE--------------
Q 037144          411 CFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHA--------IV--------------  468 (502)
Q Consensus       411 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~--------~~--------------  468 (502)
                      +|.+ +.                           .   ..+.+.+.+.|... ...        ..              
T Consensus       332 ~~~~-~~---------------------------~---~~~~~~l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~  379 (412)
T 2cb1_A          332 TLDL-GD---------------------------L---ERASRFLGAIRLLK-AANLGDARTLLVHPWTTTHSRLKEEAR  379 (412)
T ss_dssp             EEEC-SS---------------------------H---HHHHHHHHHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHH
T ss_pred             EEEe-CC---------------------------H---HHHHHHHHhCCeee-ecccCCCcceeecCcccccccCCHHHH
Confidence            8888 42                           1   12333333446543 220        00              


Q ss_pred             --CC--EEEEEEEecCCCCcHHHHHHHHHHHHH
Q 037144          469 --GG--IYVLRFAAGNSMTMESHVRAAWTVVQE  497 (502)
Q Consensus       469 --~g--~~~lR~~~~~~~t~~~di~~~~~~l~~  497 (502)
                        .|  ...+|+|++ ..+++++|+++.++|++
T Consensus       380 ~~~g~~~~~iR~s~g-~~~~~~~i~~l~~al~~  411 (412)
T 2cb1_A          380 LQAGVTPGLVRVSVG-LEDPLDLLALFEEALEA  411 (412)
T ss_dssp             HHTTCCTTEEEEECC-SSCHHHHHHHHHHHHHC
T ss_pred             HhcCCCCCeEEEEec-cCCHHHHHHHHHHHHhh
Confidence              01  468999986 55677799999998864

>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*

Probab=99.89  E-value=5.3e-22  Score=214.97  Aligned_cols=249  Identities=12%  Similarity=0.006  Sum_probs=166.5

Q ss_pred             HHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHH-HHHcCC
Q 037144          119 NIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKA-AQIVGI  197 (502)
Q Consensus       119 ~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a-a~~~Gl  197 (502)
                      .++.+.+++++|.+.        ..++++|+|++|..++.+...           +++.|+++...|.|+..+ +.+.|+
T Consensus       176 ~e~e~~lA~~~gae~--------~i~v~nGtt~an~~ai~al~~-----------pGD~VLv~~~~H~S~~~~~~~l~Ga  236 (730)
T 1c4k_A          176 VAAEKHAARVYNADK--------TYFVLGGSSNANNTVTSALVS-----------NGDLVLFDRNNHKSVYNSALAMAGG  236 (730)
T ss_dssp             HHHHHHHHHHTTCSE--------EEEESSHHHHHHHHHHHHHCC-----------TTCEEEEETTCCHHHHHHHTTTTCC
T ss_pred             HHHHHHHHHHHCCCc--------EEEECCHHHHHHHHHHHHhcC-----------CCCEEEEcCCchHHHHHHHHHHCCC
Confidence            345677899999875        357777777899877776543           678899999999999998 888888


Q ss_pred             CCCCEEEEecCCCC---CcccCHHHH-----HHHHHHH-Hh--cCCcc-EEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144          198 DRKNIRAIKTTKSS---SYGLSAESV-----LSQINLD-VE--AELIP-LFLCATVGTTAITAVDPLKPLCDVAKQFGIW  265 (502)
Q Consensus       198 g~~~v~~v~~~~~~---~~~~d~~~L-----e~~i~~~-~~--~g~~p-~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~  265 (502)
                         +++.++.+.++   .+.+|+++|     +++|++. .+  ....| .+|+++.+ |++|.+.|+++|+++|++||++
T Consensus       237 ---~~v~v~~~~~~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~dl~~I~~la~~~g~~  312 (730)
T 1c4k_A          237 ---RPVYLQTNRNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYNAHEVVKRIGHLCDY  312 (730)
T ss_dssp             ---EEEEECEEECTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEECHHHHHHHHGGGBSE
T ss_pred             ---EEEEEeCCccccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecCHHHHHHHHHHcCCe
Confidence               88888764321   145889888     7777543 11  01123 46777777 4799999999999999999999


Q ss_pred             EEeecccccccccCccchh--hhcC-CCCCC----eeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCC
Q 037144          266 VHVDAAYAGSACICPEFRH--FIDG-VECVD----SFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQ  338 (502)
Q Consensus       266 lhVDaA~g~~~~~~~~~~~--~~~~-~~~aD----si~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~  338 (502)
                      +|||+||+++..+.+..+.  .+.. -.++|    +++.++||++++|.++|++++++... .    ....++....   
T Consensus       313 livDeAh~~~~~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~g~~~gg~I~v~~~~l-~----g~~~~i~~~~---  384 (730)
T 1c4k_A          313 IEFDSAWVGYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFSQTSQIHKKDSHI-K----GQLRYCDHKH---  384 (730)
T ss_dssp             EEEECTTCCGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCTTCEEEEEECGGG-T----TSTTCCCHHH---
T ss_pred             EEEEcccccccccCcccCCcCcccccccCCCCCCEEEEECCCCCCCCCCCEEEEEecchhh-c----CcccccCHHH---
Confidence            9999999875444443321  1110 11577    99999999999988889999987642 1    1111111000   


Q ss_pred             CCcccccCCCcccccCCCCC--CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEecC
Q 037144          339 EPKEQEVGYKDWQITLCRRF--RSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTS-DKRFEVAFP  404 (502)
Q Consensus       339 ~~~~~~~~~~~~~~~~sr~~--~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~-~~~~~l~~~  404 (502)
                            +......++.+.+.  ...++-.+++.+..++..+.+++..++++++++.|++ ++|++++.+
T Consensus       385 ------~~~~~~~~~stsp~~~~iaal~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p  447 (730)
T 1c4k_A          385 ------FNNSFNLFMSTSPFYPMYAALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVP  447 (730)
T ss_dssp             ------HHHHHHHHSCSSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSC
T ss_pred             ------HHHHHHHhCCCCCcHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEccc
Confidence                  00000011111111  1123334555555544467789999999999999998 789998754

>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}

Probab=99.89  E-value=1.8e-21  Score=204.13  Aligned_cols=334  Identities=10%  Similarity=0.038  Sum_probs=212.0

Q ss_pred             CcccccChhhHHHHHHHHHHHHHhcC-CCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCC-CCeEEEeCC
Q 037144          105 GLDWISSPAAVELENIVMDWLGQMLD-LPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENI-SKLVVYSSD  182 (502)
Q Consensus       105 ~~~~~~~p~~~~le~~~~~~l~~l~g-~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~-~~~~v~~s~  182 (502)
                      ...|..+.+..++++++.+++.+..| ++...     ...++|+|+++++..++.+..+.        |. +++.|+++.
T Consensus       122 ~~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~-----~~i~~t~G~~~ai~~~~~~l~~~--------gd~~~d~Vlv~~  188 (498)
T 3ihj_A          122 LGSYSASQGVNCIREDVAAYITRRDGGVPADP-----DNIYLTTGASDGISTILKILVSG--------GGKSRTGVMIPI  188 (498)
T ss_dssp             ------CCSCHHHHHHHHHHHHHHTTTCCCCG-----GGEEEESSHHHHHHHHHHHHCCC--------CGGGSEEEEEEE
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHhcCCCCCCc-----ccEEEcCCHHHHHHHHHHHHcCC--------CCCCCCEEEEeC
Confidence            35677777888999999999999985 64221     26899999999998777654321        00 235899999


Q ss_pred             CCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc---CChhHHHHHH
Q 037144          183 QTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV---DPLKPLCDVA  259 (502)
Q Consensus       183 ~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i---dpl~eI~~i~  259 (502)
                      ..|.++..+++.+|.   +++.++++++++|.+|+++|+++|++... +..+.+|+++.++|+||.+   +++++|+++|
T Consensus       189 p~y~~~~~~~~~~g~---~~v~~~~~~~~~~~~d~~~le~~l~~~~~-~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la  264 (498)
T 3ihj_A          189 PQYPLYSAVISELDA---IQVNYYLDEENCWALNVNELRRAVQEAKD-HCDPKVLCIINPGNPTGQVQSRKCIEDVIHFA  264 (498)
T ss_dssp             SCCTHHHHHHHHTTC---EEEEEECBGGGTTBCCHHHHHHHHHHHTT-TSEEEEEEEESSCTTTCCCCCHHHHHHHHHHH
T ss_pred             CCchhHHHHHHHcCC---EEEEeeccccccCCCCHHHHHHHHHhhhc-cCCCeEEEEECCCCCCCCcCCHHHHHHHHHHH
Confidence            999999999999999   99999998765689999999999987532 1235678888999999999   5577899999


Q ss_pred             HHhCCEEEeecccccccccCc----cchhhhcCC-----CCCCee-EEccCCcCC--CCCcceEEEe--eCchhhhhhhc
Q 037144          260 KQFGIWVHVDAAYAGSACICP----EFRHFIDGV-----ECVDSF-SFNPHKWLF--TTLDCCCLWV--KDPSCLLSTLS  325 (502)
Q Consensus       260 ~~~g~~lhVDaA~g~~~~~~~----~~~~~~~~~-----~~aDsi-~~~~hK~l~--~p~~~g~~~~--r~~~~l~~~~~  325 (502)
                      ++||+++++|.+|+.+.+...    ........+     .....+ ..+++|.+.  .....|++.+  .++........
T Consensus       265 ~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~~~l~~~l~~  344 (498)
T 3ihj_A          265 WEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEIKGQLVK  344 (498)
T ss_dssp             HHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCCHHHHHHHHH
T ss_pred             HHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecCCHHHHHHHHH
Confidence            999999999999987655321    111111101     123334 457999994  4566777764  44443221111


Q ss_pred             CCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc------------HHHHHHHHHHHHHHHHHHHHHH
Q 037144          326 TNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG------------VANLRNFIRSHVGMAKLFERLV  393 (502)
Q Consensus       326 ~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g------------~~g~~~~~~~~~~la~~l~~~l  393 (502)
                      ....++.                      +   ..+..++....+.            .+...++.+++.++++++.+.|
T Consensus       345 ~~~~~~~----------------------~---~~~~q~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L  399 (498)
T 3ihj_A          345 LLSVRLC----------------------P---PVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLF  399 (498)
T ss_dssp             HHHHSCC----------------------C---CHHHHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHhccCC----------------------C---CHHHHHHHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            1000110                      0   1222222222221            1223566778889999999999


Q ss_pred             hcCCCeEEecCCCeeEEEE-EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHH--HHHHHHhcCcEEEEeeeE--
Q 037144          394 TSDKRFEVAFPRNFSLVCF-RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRE--LLESINVSGKVFMTHAIV--  468 (502)
Q Consensus       394 ~~~~~~~l~~~~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~~l~~~g~~~~~~~~~--  468 (502)
                      +++|++++. +++.+++.| ++..+.- ..                ......+.....  +.+.+.+.|.++.++..+  
T Consensus       400 ~~~~g~~~~-~p~gg~~~~~~l~~p~~-~~----------------~~~~~~g~~~~~~~~~~ll~~~gI~v~pG~~f~~  461 (498)
T 3ihj_A          400 NQVPGIHCN-PLQGAMYAFPRIFIPAK-AV----------------EAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQ  461 (498)
T ss_dssp             HTSTTEECC-CCCBSSEECCEECCCHH-HH----------------HHHHHTTSCHHHHHHHHHHHHHCBCCEEGGGTCC
T ss_pred             hcCCCcEec-CCCeEEEEEEeccCchh-hh----------------HHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCC
Confidence            999999886 566677666 3321100 00                000000000112  234445568766554433  


Q ss_pred             -CCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          469 -GGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       469 -~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                       .+..++|+++.   .++++++++++.|.++.++
T Consensus       462 ~~~~~~~Ris~~---~~~e~l~~~i~~L~~~~~~  492 (498)
T 3ihj_A          462 REGTYHFRMTIL---PPVEKLKTVLQKVKDFHIN  492 (498)
T ss_dssp             CTTCCBEEEECC---SCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEEeC---CCHHHHHHHHHHHHHHHHH
Confidence             34568999984   4678999999999887654

>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}

Probab=99.89  E-value=1.9e-21  Score=194.97  Aligned_cols=330  Identities=10%  Similarity=0.031  Sum_probs=205.6

Q ss_pred             CCcccccCCCCCCHHHHHHHHHHhhcC-CCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHH
Q 037144           76 SPNYFAYFPATSSVAGIVGEMLSSGFN-VVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALL  154 (502)
Q Consensus        76 ~p~~~~~~~~~~~~~~~~~~~l~~~~n-~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~  154 (502)
                      +..|++.-+ .+..+..+.+++..... .....|...+...+++    +++++++|.+.         .++++|||+|+.
T Consensus        11 ~~~~l~~~~-~p~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~----~~la~~~~~~~---------~i~~~~G~~a~~   76 (357)
T 3lws_A           11 QTTGQISGH-GKRNVGVLKTAFAAVADEMASDQYGTGAIIEPFE----QKFADVLGMDD---------AVFFPSGTMAQQ   76 (357)
T ss_dssp             TCSEESSBS-SCCBHHHHHHHHTTSCTTCBCEETTEETTHHHHH----HHHHHHHTCSE---------EEEESCHHHHHH
T ss_pred             hhcccccCC-CCCCHHHHHHHHHHhhcccCcccccCChHHHHHH----HHHHHHhCCCc---------EEEecCcHHHHH
Confidence            345666654 34555666666554221 1223455556555555    55777888743         477788999998


Q ss_pred             HHHHHHHHHHHHHhCccCCCC-eEEEeCCCCchhHHH---HHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhc
Q 037144          155 CTLTAARDRVLKKIGRENISK-LVVYSSDQTHCAFQK---AAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEA  230 (502)
Q Consensus       155 ~al~~a~~~~~~~~~~~~~~~-~~v~~s~~~H~s~~~---aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~  230 (502)
                      .++.+....          ++ .+|+++...|++...   .+...|+   +++.+|.+   ++.+|+++|+++.+     
T Consensus        77 ~al~~~~~~----------gd~~~vi~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~---~~~~d~~~l~~~~~-----  135 (357)
T 3lws_A           77 VALRIWSDE----------TDNRTVAYHPLCHLEIHEQDGLKELHPI---ETILVGAA---DRLMTLDEIKALPD-----  135 (357)
T ss_dssp             HHHHHHHHH----------HTCCEEEECTTCHHHHSSTTHHHHHSSC---EEEECSCT---TSCCCHHHHHTCCS-----
T ss_pred             HHHHHHhhc----------CCCcEEEecccceeeeeccchhhhccCc---EEEEecCC---CCCcCHHHHhcCcC-----
Confidence            888776653          22 278888888887655   3456677   78877743   46899999998721     


Q ss_pred             CCccEEEEEecCCccc-cccCC---hhHHHHHHHHhCCEEEeecccccccc--cCccchhhhcCCCCCCeeEEccCCcCC
Q 037144          231 ELIPLFLCATVGTTAI-TAVDP---LKPLCDVAKQFGIWVHVDAAYAGSAC--ICPEFRHFIDGVECVDSFSFNPHKWLF  304 (502)
Q Consensus       231 g~~p~~Vv~t~gtt~~-G~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~--~~~~~~~~~~~~~~aDsi~~~~hK~l~  304 (502)
                         +.+|+++.++|++ |.+-|   +++|+++|++||+|+|+|+||.....  .........   ..+|+++.++||+++
T Consensus       136 ---~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~---~~~d~~~~s~sK~~~  209 (357)
T 3lws_A          136 ---IACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIA---GLFDSIYISFYKGLG  209 (357)
T ss_dssp             ---CSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHH---TTSSEEEEESSSTTC
T ss_pred             ---cceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChHHHH---hcCCEEEEeccccCC
Confidence               2378888888887 88765   89999999999999999999862211  111112211   367899999999998


Q ss_pred             CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHH
Q 037144          305 TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVG  384 (502)
Q Consensus       305 ~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~  384 (502)
                      +|.+ |+++ .++.......... .......                    +....+. ..++..+  +...+.+++..+
T Consensus       210 ~~~g-g~~~-~~~~~~~~~~~~~-~~~~~~~--------------------~~~~~~~-~~~~~~l--~~~~~~~~~~~~  263 (357)
T 3lws_A          210 GIAG-AILA-GPAAFCQTARIWK-RRYGGDL--------------------ISLYPYI-VSADYYY--ELRKDRMGQYYE  263 (357)
T ss_dssp             CSSC-EEEE-ECHHHHHHHHHHH-HHTTCCC--------------------SCCHHHH-HHHHHHH--HHHTTCHHHHHH
T ss_pred             CCce-EEEE-cCHHHHHHHHHHH-HHhcCCc--------------------ccchHHH-HHHHHHH--HHHHHHHHHHHH
Confidence            7876 6654 4554332221100 0010000                    0001111 1112222  113344555678


Q ss_pred             HHHHHHHHHhcCCCeEEe-cCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEE
Q 037144          385 MAKLFERLVTSDKRFEVA-FPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFM  463 (502)
Q Consensus       385 la~~l~~~l~~~~~~~l~-~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~  463 (502)
                      +++++.+.|+++|++++. .++..+++++.+....                          .....++.+.|.++|..+.
T Consensus       264 ~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~l~~~Gi~v~  317 (357)
T 3lws_A          264 QAKQLAEQFNALPGVHTTPEVPVSNMFHLHFDGQA--------------------------ADISPKLEQVQEETGLGFV  317 (357)
T ss_dssp             HHHHHHHHHHTSTTEEEESSSCSSSEEEEEEESCH--------------------------HHHHHHHHHHHHHHCEESC
T ss_pred             HHHHHHHHHHhCCCCeeccCCCcceEEEEEecCCh--------------------------HHHHHHHHHHHHhcCeEEe
Confidence            899999999999999984 4667778877775421                          1113466777777786543


Q ss_pred             EeeeE-CCEEEEEEEecCCC--CcHHHHHHHHHHHHHH
Q 037144          464 THAIV-GGIYVLRFAAGNSM--TMESHVRAAWTVVQEH  498 (502)
Q Consensus       464 ~~~~~-~g~~~lR~~~~~~~--t~~~di~~~~~~l~~~  498 (502)
                      ++... .+..++|+++...+  .++++++++++.|.+.
T Consensus       318 ~g~~~~~~~~~~r~~i~~~~~~~~~~~l~~al~~l~~a  355 (357)
T 3lws_A          318 GYLVDKDGYCSTEISVGDAYGELDQQTRDAGFARLRQA  355 (357)
T ss_dssp             SCCEECSSEEEEEEEBCTTGGGSCHHHHHHHHHHHHHH
T ss_pred             cccccCCCceEEEEEecchhhhcCHHHHHHHHHHHHHh
Confidence            33222 46679999986443  5777888888888765

>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0

Probab=99.89  E-value=3e-21  Score=194.91  Aligned_cols=318  Identities=10%  Similarity=0.019  Sum_probs=211.5

Q ss_pred             HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144           90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG  169 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~  169 (502)
                      |..+.+.+...+ .....|....+..++++++.+|+.+.+|.+...     ...++|+||++++..++.+...       
T Consensus        38 ~~~v~~a~~~~~-~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~-----~~i~~t~g~~~al~~~~~~~~~-------  104 (376)
T 3ezs_A           38 PKFIQDALKNHT-HSLNIYPKSAFEESLRAAQRGFFKRRFKIELKE-----NELISTLGSREVLFNFPSFVLF-------  104 (376)
T ss_dssp             CHHHHHHHHTTG-GGGGSCCCTTCCHHHHHHHHHHHHHHHSCCCCG-----GGEEEESSSHHHHHHHHHHHTT-------
T ss_pred             CHHHHHHHHHhh-hhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCH-----HHEEECcCcHHHHHHHHHHHcC-------
Confidence            445666666655 223345544556889999999999999983211     2689999999999888776643       


Q ss_pred             ccCCC--CeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccc
Q 037144          170 RENIS--KLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAIT  247 (502)
Q Consensus       170 ~~~~~--~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G  247 (502)
                          +  ++.|+++..+|.++..+++..|.   +++.+|+++++  .+++ +|++++.++++      +|+++.++|++|
T Consensus       105 ----~~~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~--~~~~-~l~~~~~~~~~------~v~~~~p~nptG  168 (376)
T 3ezs_A          105 ----DYQNPTIAYPNPFYQIYEGAAKFIKA---KSLLMPLTKEN--DFTP-SLNEKELQEVD------LVILNSPNNPTG  168 (376)
T ss_dssp             ----TCSSCEEEEEESCCTHHHHHHHHTTC---EEEEEECCGGG--TSCC-CCCHHHHHHCS------EEEECSSCTTTC
T ss_pred             ----CCCCCEEEEecCCcHhHHHHHHHcCC---EEEEcccCCCC--Ccch-hHHhhhccCCC------EEEEcCCCCCcC
Confidence                5  67888999999999999999999   99999998643  4555 77888876443      777788999999


Q ss_pred             ccCC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcC-------CCCCCeeEEccCCcCC-CCCcceEEEeeC
Q 037144          248 AVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDG-------VECVDSFSFNPHKWLF-TTLDCCCLWVKD  316 (502)
Q Consensus       248 ~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~-------~~~aDsi~~~~hK~l~-~p~~~g~~~~r~  316 (502)
                      .+-|   +++|+++|++||+++++|++|+.+..... .......       ....+.+..++||+++ .+..+|+++. +
T Consensus       169 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~-~  246 (376)
T 3ezs_A          169 RTLSLEELISWVKLALKHDFILINDECYSEIYENTP-PPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAG-D  246 (376)
T ss_dssp             CCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSC-CCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGGGCCEEEEE-C
T ss_pred             CCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCC-CCCHHHccccccccccCcEEEEecchhccCCccceeEEEee-C
Confidence            9966   67777889999999999999987654321 1111110       1256688889999996 4556787765 3


Q ss_pred             chhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhc
Q 037144          317 PSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF-GVANLRNFIRSHVGMAKLFERLVTS  395 (502)
Q Consensus       317 ~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~la~~l~~~l~~  395 (502)
                      +.... .+.....+..                 +      ....+..+++...+ ..+.+++..++..++++++.+.|+ 
T Consensus       247 ~~~~~-~~~~~~~~~~-----------------~------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~-  301 (376)
T 3ezs_A          247 SRLLE-KYKAFRAYLG-----------------Y------TSANAIQKASEAAWLDDRHAEFFRNIYANNLKLARKIFK-  301 (376)
T ss_dssp             HHHHH-HHHHHHTTTC-----------------C------CCCHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHST-
T ss_pred             HHHHH-HHHHHHhhhc-----------------C------CCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhc-
Confidence            43322 2211000000                 0      01223333333332 134577888888899999999887 


Q ss_pred             CCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh-cCcEEEEeeeEC----C
Q 037144          396 DKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV-SGKVFMTHAIVG----G  470 (502)
Q Consensus       396 ~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~----g  470 (502)
                        ++.  .+....++.+.+. .                              ..++.+++.+ .|..+.++..+.    +
T Consensus       302 --~~~--~~~~~~~~~~~~~-~------------------------------~~~~~~~l~~~~gi~v~~g~~~~~~~~~  346 (376)
T 3ezs_A          302 --NTL--IYPYSFYVYLPVQ-N------------------------------GENFAKTLYQNEGIITLPALYLGRNRIG  346 (376)
T ss_dssp             --TCC--CCSBSSEEEEECS-C------------------------------HHHHHHHHHHHHCCBCEEGGGGCSTTTT
T ss_pred             --CCC--CCCcceEEEEECC-C------------------------------HHHHHHHHHHhCCEEEeCcHHhCCCCCC
Confidence              454  2333334444443 1                              2355666665 687654433322    4


Q ss_pred             EEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          471 IYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       471 ~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      ..++|++++.   ++++|+++++.|.++.++
T Consensus       347 ~~~iRis~~~---~~~~i~~~l~~l~~~l~~  374 (376)
T 3ezs_A          347 ADYVRLALVY---DTPLLEKPLEIIETYREN  374 (376)
T ss_dssp             TTEEEEECCS---CHHHHHHHHHHHHHHHCC
T ss_pred             CCeEEEEEcC---CHHHHHHHHHHHHHHHHh
Confidence            5799999863   778999999999988754

>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*

Probab=99.88  E-value=1.8e-21  Score=197.77  Aligned_cols=327  Identities=15%  Similarity=0.105  Sum_probs=203.6

Q ss_pred             HHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCC
Q 037144           94 GEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENI  173 (502)
Q Consensus        94 ~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~  173 (502)
                      .+.+...+....  +..++...++++    .+++++|.+         .+++|+|||+|+..++.+.+-.          
T Consensus        23 ~~a~~~~~~~~~--~~~~~~~~~l~~----~la~~~~~~---------~~~~~~~gt~al~~~~~~~~~~----------   77 (393)
T 1mdo_A           23 LAAVKTVLDSGW--ITTGPKNQELEA----AFCRLTGNQ---------YAVAVSSATAGMHIALMALGIG----------   77 (393)
T ss_dssp             HHHHHHHHHHTC--CSSSHHHHHHHH----HHHHHHCCS---------EEEEESCHHHHHHHHHHHTTCC----------
T ss_pred             HHHHHHHHhcCC--cCCChHHHHHHH----HHHHHhCCC---------cEEEecChHHHHHHHHHHcCCC----------
Confidence            344544443321  223455555555    456666654         3789999999998887765211          


Q ss_pred             CCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChh
Q 037144          174 SKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLK  253 (502)
Q Consensus       174 ~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~  253 (502)
                      +++.|+++..+|.++..+++..|+   +++.+|++++ ++.+|+++|+++|+++      +.+|+++   +++|.+.|++
T Consensus        78 ~gd~Vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~-~~~~d~~~l~~~l~~~------~~~v~~~---~~~G~~~~~~  144 (393)
T 1mdo_A           78 EGDEVITPSMTWVSTLNMIVLLGA---NPVMVDVDRD-TLMVTPEHIEAAITPQ------TKAIIPV---HYAGAPADLD  144 (393)
T ss_dssp             TTCEEEEESSSCHHHHHHHHHTTC---EEEEECBCTT-TCCBCHHHHHHHCCTT------EEEECCB---CGGGCCCCHH
T ss_pred             CCCEEEeCCCccHhHHHHHHHCCC---EEEEEeccCC-cCCCCHHHHHHhcCCC------ceEEEEe---CCCCCcCCHH
Confidence            567889999999999999999999   9999999853 4789999999998643      3355554   4799999999


Q ss_pred             HHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccC--CcCCCCCcceEEEeeCchhhhhhhcCCcccc
Q 037144          254 PLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPH--KWLFTTLDCCCLWVKDPSCLLSTLSTNPQYL  331 (502)
Q Consensus       254 eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~h--K~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl  331 (502)
                      +|.++|+++|+++++|++|+.+.....  +..  +.  .|++++++|  |+++++ ..|+++.+++..............
T Consensus       145 ~i~~l~~~~~~~li~D~a~~~g~~~~~--~~~--~~--~d~~~~S~~k~K~l~~~-~~g~~~~~~~~~~~~l~~~~~~~~  217 (393)
T 1mdo_A          145 AIYALGERYGIPVIEDAAHATGTSYKG--RHI--GA--RGTAIFSFHAIKNITCA-EGGIVVTDNPQFADKLRSLKFHGL  217 (393)
T ss_dssp             HHHHHHHHHTCCBCEECTTCTTCEETT--EET--TS--SSEEEEECCTTSSSCSS-SCEEEEESCHHHHHHHHHHTBTTE
T ss_pred             HHHHHHHHcCCeEEEECccccCCeECC--eec--CC--CCeEEEeCCCCCccccc-cceEEEeCCHHHHHHHHHHHhcCC
Confidence            999999999999999999985543321  111  11  899999999  998654 456666654543322111000000


Q ss_pred             cCccCCCCCcccccCCCccccc---CC--CCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-
Q 037144          332 KNEATDQEPKEQEVGYKDWQIT---LC--RRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR-  405 (502)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~~~---~s--r~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~-  405 (502)
                      ......     .......+.++   .+  .+..++....++.  ..+++++..++..++++++.+.|.+++ +++...+ 
T Consensus       218 ~~~~~~-----~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~--~l~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~  289 (393)
T 1mdo_A          218 GVDAWD-----RQSGGRAPQAEVLAPGYKYNLPDLNAAIALA--QLQKLDALNARRAAIAAQYHQAMADLP-FQPLSLPS  289 (393)
T ss_dssp             ECC----------------CCEESSCCCBCCCCHHHHHHHHH--HHHTHHHHHHHHHHHHHHHHHHHHTSS-CEECCCCS
T ss_pred             cccchh-----hhcccccccccccccCccCCCCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCC-cccccCCC
Confidence            000000     00000001111   11  1223333333333  345677888888999999999999986 8876432 


Q ss_pred             -----CeeEEEEEeecC--cchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeE----------
Q 037144          406 -----NFSLVCFRVTPS--AVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIV----------  468 (502)
Q Consensus       406 -----~~~~v~f~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~----------  468 (502)
                           ...++++++.+.  +.                           ...++.+.|.+.|..+..+...          
T Consensus       290 ~~~~~~~~~~~v~~~~~~~~~---------------------------~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~~~  342 (393)
T 1mdo_A          290 WEHIHAWHLFIIRVDEARCGI---------------------------TRDALMASLKTKGIGTGLHFRAAHTQKYYRER  342 (393)
T ss_dssp             SCEECCCSCEEEECCHHHHSS---------------------------CHHHHHHHHHHTTBCCBCCCCCGGGSHHHHHH
T ss_pred             CCCCceeEEEEEEeccccccc---------------------------CHHHHHHHHHhCCCCcccccCccccChhhhcc
Confidence                 223566666420  00                           0345677777778643221100          


Q ss_pred             ------C-----CEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          469 ------G-----GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       469 ------~-----g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                            .     +..++|+++. ..++++||++++++|+++.+.
T Consensus       343 ~~~~~~~~~~~~~~~~lRi~~~-~~~t~~~i~~~~~~l~~~~~~  385 (393)
T 1mdo_A          343 FPTLTLPDTEWNSERICSLPLF-PDMTESDFDRVITALHQIAGQ  385 (393)
T ss_dssp             STTCCCHHHHHHHTTEEEECCC-TTCCHHHHHHHHHHHHHHHC-
T ss_pred             CCccCChhHHHHHhCEEEecCC-CCCCHHHHHHHHHHHHHHHhc
Confidence                  0     1237999975 556778999999999988653

>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*

Probab=99.88  E-value=3.5e-21  Score=193.75  Aligned_cols=313  Identities=12%  Similarity=0.049  Sum_probs=202.4

Q ss_pred             HHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCc
Q 037144           91 GIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGR  170 (502)
Q Consensus        91 ~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~  170 (502)
                      ..+.+.+...+.. ...|. .+...++++.    +++++|.+.+       ..++|+|+++++..++.+.  .       
T Consensus        40 ~~v~~a~~~~~~~-~~~y~-~~~~~~l~~~----la~~~~~~~~-------~v~~~~g~~~al~~~~~~~--~-------   97 (364)
T 1lc5_A           40 VSVKRALIDNLDC-IERYP-DADYFHLHQA----LARHHQVPAS-------WILAGNGETESIFTVASGL--K-------   97 (364)
T ss_dssp             HHHHHHHHHTGGG-GGSCC-CTTCHHHHHH----HHHHHTSCGG-------GEEEESSHHHHHHHHHHHH--C-------
T ss_pred             HHHHHHHHHHHHH-hhcCC-CCCHHHHHHH----HHHHHCcCHH-------HEEECCCHHHHHHHHHHHc--C-------
Confidence            3455666555533 22342 2344555554    5566677644       5899999999998777665  1       


Q ss_pred             cCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC
Q 037144          171 ENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD  250 (502)
Q Consensus       171 ~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id  250 (502)
                         + +.|++...+|.++..+++..|.   +++.+|.++++++.+ ++++.+.+.+      .+.+|+++.++|++|.+-
T Consensus        98 ---g-d~vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~-l~~~~~~~~~------~~~~v~i~~p~nptG~~~  163 (364)
T 1lc5_A           98 ---P-RRAMIVTPGFAEYGRALAQSGC---EIRRWSLREADGWQL-TDAILEALTP------DLDCLFLCTPNNPTGLLP  163 (364)
T ss_dssp             ---C-SEEEEEESCCTHHHHHHHHTTC---EEEEEECCGGGTTCC-CTTHHHHCCT------TCCEEEEESSCTTTCCCC
T ss_pred             ---C-CeEEEeCCCcHHHHHHHHHcCC---eEEEEeCCcccccch-hHHHHHhccC------CCCEEEEeCCCCCCCCCC
Confidence               3 5677788899999999999999   999999875222332 3433333321      234677788999999998


Q ss_pred             C---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcC
Q 037144          251 P---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLST  326 (502)
Q Consensus       251 p---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~  326 (502)
                      |   +++|+++|++||+++++|++|+.+..........+ +....|.++.++||+++.| ..+|++++.++.........
T Consensus       164 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~~~  242 (364)
T 1lc5_A          164 ERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPAL-KDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMARMRRQ  242 (364)
T ss_dssp             CHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGC-TTCTTEEEEEESTTTTTCTTTCCEEEECCCHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhhhcCcEEEEECcChhhccCccchhhHh-ccCCCEEEEEECchhhcCCccceEEEEECCHHHHHHHHHh
Confidence            8   99999999999999999999987653211111111 1124678888999999744 45788873444433221111


Q ss_pred             CcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC
Q 037144          327 NPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG-VANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR  405 (502)
Q Consensus       327 ~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~  405 (502)
                      ...|                          ....+..+++...+. .+.+++..++..++++++.+.|+++|++++. ++
T Consensus       243 ~~~~--------------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~  295 (364)
T 1lc5_A          243 QMPW--------------------------SVNALAALAGEVALQDSAWQQATWHWLREEGARFYQALCQLPLLTVY-PG  295 (364)
T ss_dssp             SCTT--------------------------CSCHHHHHHHHHGGGCHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEC-CC
T ss_pred             CCCC--------------------------CCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcCCCCEEC-CC
Confidence            1000                          013344455555543 3567788888899999999999998899876 55


Q ss_pred             CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC--CEEEEEEEecCCCC
Q 037144          406 NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG--GIYVLRFAAGNSMT  483 (502)
Q Consensus       406 ~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lR~~~~~~~t  483 (502)
                      ..+++.+.+...                              ..++.+.|.++|..+.++..+.  +..++|++++    
T Consensus       296 ~g~~~~~~~~~~------------------------------~~~l~~~l~~~gi~v~~g~~~~~~~~~~iRis~~----  341 (364)
T 1lc5_A          296 RANYLLLRCERE------------------------------DIDLQRRLLTQRILIRSCANYPGLDSRYYRVAIR----  341 (364)
T ss_dssp             SSSEEEEEESCT------------------------------TCCHHHHHHTTTEECEECTTSTTCCTTEEEEECC----
T ss_pred             CCeEEEEECCCc------------------------------HHHHHHHHHHCCcEEeeCcccCCCCCCEEEEEeC----
Confidence            666666655321                              1245666777786544433232  2468999975    


Q ss_pred             cHHHHHHHHHHHHHHHHh
Q 037144          484 MESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       484 ~~~di~~~~~~l~~~~~~  501 (502)
                      +++++++++++|+++.++
T Consensus       342 ~~~~~~~l~~~l~~~~~~  359 (364)
T 1lc5_A          342 SAAQNERLLAALRNVLTG  359 (364)
T ss_dssp             CHHHHHHHHHHHHHHC--
T ss_pred             CHHHHHHHHHHHHHHhhc
Confidence            467899999999887653

>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0

Probab=99.88  E-value=2.1e-21  Score=198.77  Aligned_cols=309  Identities=11%  Similarity=0.052  Sum_probs=191.3

Q ss_pred             cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144          110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ  189 (502)
Q Consensus       110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~  189 (502)
                      ..+...++|+.+.+++++++|.+..       . +++++||+|+..++.+...           +++.|+++..+|.++.
T Consensus        65 ~~~~~~~~~~~~~~~la~~~g~~~~-------~-i~~~sGt~a~~~~~~~~~~-----------~gd~vl~~~~~~~~~~  125 (417)
T 3n0l_A           65 GCEFVDEIETLAIERCKKLFNCKFA-------N-VQPNSGSQANQGVYAALIN-----------PGDKILGMDLSHGGHL  125 (417)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHTCSEE-------E-CCCSSHHHHHHHHHHHHSC-----------TTCEEEEECC------
T ss_pred             cchHHHHHHHHHHHHHHHHhCCCCc-------c-eEeccHHHHHHHHHHHhcC-----------CCCEEEeccccccccc
Confidence            3456678999999999999998653       2 4445558999888776643           6778888888887765


Q ss_pred             H---HHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEE
Q 037144          190 K---AAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWV  266 (502)
Q Consensus       190 ~---aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~l  266 (502)
                      .   .....|.+. .++.++++  +++.+|+++|+++|++..     +.+|+++.++  .|.+.|+++|.++|++||+++
T Consensus       126 ~~~~~~~~~g~~~-~~~~~~~~--~~~~~d~~~l~~~i~~~~-----~~~v~~~~~~--~G~~~~l~~i~~l~~~~~~~l  195 (417)
T 3n0l_A          126 THGAKVSSSGKMY-ESCFYGVE--LDGRIDYEKVREIAKKEK-----PKLIVCGASA--YARVIDFAKFREIADEIGAYL  195 (417)
T ss_dssp             ----------CCS-EEEEECCC--TTSSCCHHHHHHHHHHHC-----CSEEEECCSS--CCSCCCHHHHHHHHHHHTCEE
T ss_pred             chhhhhhhhccee-eeEeccCC--CCCCcCHHHHHHHHHhcC-----CeEEEECCcc--cCccCCHHHHHHHHHHcCCEE
Confidence            4   334445411 34455555  357899999999997421     2366666655  399999999999999999999


Q ss_pred             EeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccC
Q 037144          267 HVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVG  346 (502)
Q Consensus       267 hVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~  346 (502)
                      ++|++|+.+.........   .+..+|+++.++||++.+|. .|+++.+++.... .+..   .....            
T Consensus       196 i~Dea~~~g~~~~~~~~~---~~~~~di~~~s~sK~l~g~~-~G~~~~~~~~~~~-~~~~---~~~~~------------  255 (417)
T 3n0l_A          196 FADIAHIAGLVVAGEHPS---PFPYAHVVSSTTHKTLRGPR-GGIIMTNDEELAK-KINS---AIFPG------------  255 (417)
T ss_dssp             EEECTTTHHHHHTTSSCC---CTTTCSEEEEESSTTTCSCS-CEEEEESCHHHHH-HHHH---HHTTT------------
T ss_pred             EEECccchhhhhcccCCC---ccccceEEEeeCccccCCCC-eeEEEECCHHHHH-HHhh---hhCCc------------
Confidence            999997655443222111   12367999999999997776 4777776544332 2211   00000            


Q ss_pred             CCcccccCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-CCeeEEEEEeecCcchhhhh
Q 037144          347 YKDWQITLCRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP-RNFSLVCFRVTPSAVMDKLR  424 (502)
Q Consensus       347 ~~~~~~~~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~-~~~~~v~f~~~~~~~~~~~~  424 (502)
                           ..++.. ....++..++.....+++.++.++..++++++.+.|++ .++++... ...+++.+.+.+.+..    
T Consensus       256 -----~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~~~~~~~~~~~----  325 (417)
T 3n0l_A          256 -----IQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMD-RKFKLVSDGTDNHLVLMSFLDREFS----  325 (417)
T ss_dssp             -----TCSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH-TTCEEGGGSCSSSEEEEECTTSSSC----
T ss_pred             -----ccCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh-CCceeccCCCCceEEEEEcccCCCC----
Confidence                 000000 01223444555545567889999999999999999998 58888642 3344555555432210    


Q ss_pred             hcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeee------ECCEEEEEEEecCC---CCcHHHHHHHHHHH
Q 037144          425 TKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAI------VGGIYVLRFAAGNS---MTMESHVRAAWTVV  495 (502)
Q Consensus       425 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~------~~g~~~lR~~~~~~---~t~~~di~~~~~~l  495 (502)
                                             ...+.+.+.+.|..+.....      ......+|++....   ..++++|+++++.|
T Consensus       326 -----------------------~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l  382 (417)
T 3n0l_A          326 -----------------------GKDADLALGNAGITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYI  382 (417)
T ss_dssp             -----------------------HHHHHHHHHHTTEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHH
T ss_pred             -----------------------HHHHHHHHHHcCeEEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHHHHHH
Confidence                                   23455556666764332211      01234699986422   24578999999999


Q ss_pred             HHHHH
Q 037144          496 QEHLE  500 (502)
Q Consensus       496 ~~~~~  500 (502)
                      .++.+
T Consensus       383 ~~~l~  387 (417)
T 3n0l_A          383 ADILD  387 (417)
T ss_dssp             HHHHH
T ss_pred             HHHHh
Confidence            98765

>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*

Probab=99.88  E-value=2.4e-21  Score=197.28  Aligned_cols=329  Identities=12%  Similarity=0.031  Sum_probs=199.4

Q ss_pred             hhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHH
Q 037144          112 PAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKA  191 (502)
Q Consensus       112 p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a  191 (502)
                      +...++++.    +++++|.+         .+++++|||+|+..++.+.+-.          +++.|+++..+|.++..+
T Consensus        32 ~~~~~l~~~----la~~~~~~---------~v~~~~ggt~al~~~~~~l~~~----------~gd~Vl~~~~~~~~~~~~   88 (394)
T 1o69_A           32 EFVNRFEQS----VKDYSKSE---------NALALNSATAALHLALRVAGVK----------QDDIVLASSFTFIASVAP   88 (394)
T ss_dssp             HHHHHHHHH----HHHHHCCS---------EEEEESCHHHHHHHHHHHTTCC----------TTCEEEEESSSCGGGTHH
T ss_pred             hHHHHHHHH----HHHHhCCC---------cEEEeCCHHHHHHHHHHHcCCC----------CCCEEEECCCccHHHHHH
Confidence            445555554    55666652         4899999999998887765211          567889999999999999


Q ss_pred             HHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecc
Q 037144          192 AQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAA  271 (502)
Q Consensus       192 a~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA  271 (502)
                      ++..|+   +++.+|++.  ++.+|+++|+++|++..   ..+.+|+++.   ++|...|+++|.++|+++|+++++|+|
T Consensus        89 ~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~~---~~~~~v~~~~---~~G~~~~l~~i~~l~~~~~~~li~Dea  157 (394)
T 1o69_A           89 ICYLKA---KPVFIDCDE--TYNIDVDLLKLAIKECE---KKPKALILTH---LYGNAAKMDEIVEICKENDIVLIEDAA  157 (394)
T ss_dssp             HHHTTC---EEEEECBCT--TSSBCHHHHHHHHHHCS---SCCCEEEEEC---GGGCCCCHHHHHHHHHHTTCEEEEECT
T ss_pred             HHHcCC---EEEEEEeCC--CCCcCHHHHHHHHhccc---CCceEEEEEC---CCCChhhHHHHHHHHHHcCCEEEEECc
Confidence            999999   999999973  57999999999997621   0123566654   789999999999999999999999999


Q ss_pred             cccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCccc
Q 037144          272 YAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQ  351 (502)
Q Consensus       272 ~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~  351 (502)
                      |+.+.......   ...+..+|+++++.||+++ |.++|+++++++............+....        ..  +  ..
T Consensus       158 ~~~g~~~~~~~---~~~~~~~~~~s~s~~K~l~-~~~~G~~~~~~~~l~~~l~~~~~~~~~~~--------~~--~--~~  221 (394)
T 1o69_A          158 EALGSFYKNKA---LGTFGEFGVYSYNGNKIIT-TSGGGMLIGKNKEKIEKARFYSTQARENC--------LH--Y--EH  221 (394)
T ss_dssp             TCTTCEETTEE---TTSSSSEEEEECCTTSSSC-CSSCEEEEESCHHHHHHHHHHTBTCCCSS--------SS--C--CC
T ss_pred             CcccceeCCcc---cccccCcEEEEEeCCccCC-CCCceEEEECCHHHHHHHHHHHHhccccC--------cc--c--cc
Confidence            98433332211   1112357899999999876 66789988876554332211111111000        00  0  01


Q ss_pred             ccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-----CeeEEEEEeecCcchhhhhhc
Q 037144          352 ITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR-----NFSLVCFRVTPSAVMDKLRTK  426 (502)
Q Consensus       352 ~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~-----~~~~v~f~~~~~~~~~~~~~~  426 (502)
                      .+.+.+++...+.+++.....+.+++.+++..++++++.+.|+++  +++..++     .+.+++|.+.+....     +
T Consensus       222 ~~~g~~~~~~~~~aa~~l~~l~~l~~~~~~~~~~~~~l~~~L~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~  294 (394)
T 1o69_A          222 LDYGYNYRLSNVLGAIGVAQMEVLEQRVLKKREIYEWYKEFLGEY--FSFLDELENSRSNRWLSTALINFDKNE-----L  294 (394)
T ss_dssp             SSCCCBCBCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTT--EECCCCCTTEECCCSSEEEEESCCGGG-----S
T ss_pred             cccCcccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--ccccCCCCCCcceeEEEEEEecchhhc-----c
Confidence            111222223233333322123457788899999999999999887  6665432     122566766431000     0


Q ss_pred             ccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEee-------eECC----E---------EEEEEEecCCCCcHH
Q 037144          427 YKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHA-------IVGG----I---------YVLRFAAGNSMTMES  486 (502)
Q Consensus       427 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-------~~~g----~---------~~lR~~~~~~~t~~~  486 (502)
                      ..+++..........  .+....++.+.|.++|..+.++.       .+..    .         ..+|+.. ++.++++
T Consensus       295 ~~~~~~~~~~~~~~~--~~~~~~~l~~~L~~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~t~e  371 (394)
T 1o69_A          295 NACQKDINISQKNIT--LHPKISKLIEDLKNKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPS-GTAMSKD  371 (394)
T ss_dssp             CCCCEEEECCCCCCC--CCHHHHHHHHHHHHTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECC-CTTCCHH
T ss_pred             ccccccccccccccc--cccCHHHHHHHHHHcCCcccccCCccccchhhhccCCCCChHHHHHhcCeEEccC-CCCCCHH
Confidence            000000000000000  00013467777777786432220       1111    0         2455554 5778888


Q ss_pred             HHHHHHHHHHHHHH
Q 037144          487 HVRAAWTVVQEHLE  500 (502)
Q Consensus       487 di~~~~~~l~~~~~  500 (502)
                      ||++++++|+++.+
T Consensus       372 di~~~~~~l~~~~~  385 (394)
T 1o69_A          372 DVYEISKLILKSIK  385 (394)
T ss_dssp             HHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999998764

>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*

Probab=99.88  E-value=1.5e-22  Score=203.08  Aligned_cols=331  Identities=13%  Similarity=0.029  Sum_probs=208.1

Q ss_pred             CHHHHHHHHHHhhcCC----CCccccc---ChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCc-hHHHHHHHHH
Q 037144           88 SVAGIVGEMLSSGFNV----VGLDWIS---SPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTT-CEALLCTLTA  159 (502)
Q Consensus        88 ~~~~~~~~~l~~~~n~----~~~~~~~---~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~gg-t~a~~~al~~  159 (502)
                      .+|..+.+.+...+..    ....|..   ++....+..++++++++++|.++..      .+++|+|+ |+|+..++..
T Consensus        13 ~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~------~v~~~~g~gt~al~~~~~~   86 (360)
T 1w23_A           13 ALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPNDY------QILFLQGGASLQFTMLPMN   86 (360)
T ss_dssp             CCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTE------EEEEESSHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCc------eEEEECCcchHHHHHHHHH
Confidence            4444555555555532    2223333   6677778888999999999996321      57889888 8988776655


Q ss_pred             HHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHH-HHHHHHhcCCccEEEE
Q 037144          160 ARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLS-QINLDVEAELIPLFLC  238 (502)
Q Consensus       160 a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~-~i~~~~~~g~~p~~Vv  238 (502)
                      ....        +.++++|+++...|++... ++..  |  +++.+|++++ ++.+|+++|++ +++++      +.+|+
T Consensus        87 l~~~--------~~~g~~vi~~~~~~~~~~~-~~~~--g--~~~~v~~~~~-~~~~d~~~l~~~~i~~~------~k~v~  146 (360)
T 1w23_A           87 LLTK--------GTIGNYVLTGSWSEKALKE-AKLL--G--ETHIAASTKA-NSYQSIPDFSEFQLNEN------DAYLH  146 (360)
T ss_dssp             HCCT--------TCEEEEEECSHHHHHHHHH-HHTT--S--EEEEEEECGG-GTSCSCCCGGGCCCCTT------EEEEE
T ss_pred             hcCC--------CCcccEEEecchhHHHHHH-HHHh--C--CeEEeecccc-cCcCCccchHhhccCCC------CCEEE
Confidence            4321        1145678888878877433 3433  4  6888998742 34689999988 77433      45788


Q ss_pred             EecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCch
Q 037144          239 ATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPS  318 (502)
Q Consensus       239 ~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~  318 (502)
                      +++++|++|.+-|  +   |+++||+++++|++|+.+....+ .    .   ..|+++.++||+++ |.|+|++++++..
T Consensus       147 ~~~~~nptG~~~~--~---i~~~~~~~li~D~a~~~~~~~~~-~----~---~~di~~~s~sK~~~-~~G~G~~~~~~~~  212 (360)
T 1w23_A          147 ITSNNTIYGTQYQ--N---FPEINHAPLIADMSSDILSRPLK-V----N---QFGMIYAGAQKNLG-PSGVTVVIVKKDL  212 (360)
T ss_dssp             EESEETTTTEECS--S---CCCCCSSCEEEECTTTTTSSCCC-G----G---GCSEEEEETTTTTS-CTTCEEEEEEHHH
T ss_pred             EeCCCCCcceecc--c---ccccCCceEEEechhhcCCCCcC-c----c---cCCEEEEEcccccC-CCCcEEEEEcHHH
Confidence            8899999999854  2   23389999999999987654322 1    1   23899999999887 6689999887542


Q ss_pred             hhhhhhcC-CcccccCccCCCCCcccccCCCcccccCCCC-CCchHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHhc
Q 037144          319 CLLSTLST-NPQYLKNEATDQEPKEQEVGYKDWQITLCRR-FRSLKLWVVIRNFGVA-NLRNFIRSHVGMAKLFERLVTS  395 (502)
Q Consensus       319 ~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~g~~-g~~~~~~~~~~la~~l~~~l~~  395 (502)
                       +. .+.. .+.++....        ... ..... ++.. .....+..+++.+..+ +++++.++..++++++.+.|++
T Consensus       213 -~~-~~~~~~~~~~~~~~--------~~~-~~~~~-~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~  280 (360)
T 1w23_A          213 -LN-TKVEQVPTMLQYAT--------HIK-SDSLY-NTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDE  280 (360)
T ss_dssp             -HC-SCCTTCCGGGCHHH--------HHH-TTTCS-SCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             -Hh-hcccCCcchhhhhh--------hhh-ccCCC-CCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence             21 1211 111110000        000 00000 0101 1123444556555444 7888999999999999999999


Q ss_pred             CCCe-EEecCC--Cee-EEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCE
Q 037144          396 DKRF-EVAFPR--NFS-LVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGI  471 (502)
Q Consensus       396 ~~~~-~l~~~~--~~~-~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~  471 (502)
                      ++++ ....++  ..+ +++|.+++                            .....++.++|.+.|..+..+.  ...
T Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~l~~~gi~~~~~~--~~~  330 (360)
T 1w23_A          281 SNGFYVGHAEKGSRSLMNVTFNLRN----------------------------EELNQQFLAKAKEQGFVGLNGH--RSV  330 (360)
T ss_dssp             TTTSSEESSCGGGBCSSEEEEECSS----------------------------HHHHHHHHHHHHHTTEESCBCC--TTT
T ss_pred             ccCcccccCCchhccCcEEEEEcCC----------------------------CccHHHHHHHHHHCCeeeecCC--CCC
Confidence            8765 654222  344 67776532                            1113456777777786542221  123


Q ss_pred             EEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          472 YVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       472 ~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      .++|++++. .++++++++++++|+++.++
T Consensus       331 ~~iRis~~~-~~~~~~i~~~~~~l~~~~~~  359 (360)
T 1w23_A          331 GGCRASIYN-AVPIDACIALRELMIQFKEN  359 (360)
T ss_dssp             CSEEEECCT-TSCHHHHHHHHHHHHHHHHH
T ss_pred             CeEEEEecC-CCCHHHHHHHHHHHHHHHhh
Confidence            579999864 45778999999999988654

>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*

Probab=99.88  E-value=1.1e-21  Score=199.93  Aligned_cols=287  Identities=14%  Similarity=0.151  Sum_probs=191.6

Q ss_pred             HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHH--
Q 037144          115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAA--  192 (502)
Q Consensus       115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa--  192 (502)
                      .....++.+++++++|.+         ..+++++|++|+..++.+...           +++.|+++...|.++...+  
T Consensus        63 ~~~~~~l~~~la~~~g~~---------~~i~~~sG~~a~~~~l~~~~~-----------~gd~vi~~~~~~~~~~~~~~~  122 (398)
T 2rfv_A           63 NPTTDALEKKLAVLERGE---------AGLATASGISAITTTLLTLCQ-----------QGDHIVSASAIYGCTHAFLSH  122 (398)
T ss_dssp             CHHHHHHHHHHHHHHTCS---------EEEEESSHHHHHHHHHHHHCC-----------TTCEEEEESSSCHHHHHHHHT
T ss_pred             ChHHHHHHHHHHHHhCCC---------cEEEECCHHHHHHHHHHHHhC-----------CCCEEEEcCCCcccHHHHHHH
Confidence            345566778888998875         257777788999888776632           5678889999999887766  


Q ss_pred             --HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeec
Q 037144          193 --QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDA  270 (502)
Q Consensus       193 --~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDa  270 (502)
                        +..|+   +++.+|.+       |+++|+++++++      +.+|+++.++|++|.+.|+++|+++|++||+++|+|+
T Consensus       123 ~~~~~g~---~~~~v~~~-------d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De  186 (398)
T 2rfv_A          123 SMPKFGI---NVRFVDAA-------KPEEIRAAMRPE------TKVVYIETPANPTLSLVDIETVAGIAHQQGALLVVDN  186 (398)
T ss_dssp             HHHHTTC---EEEEECTT-------SHHHHHHHCCTT------EEEEEEESSBTTTTBCCCHHHHHHHHHHTTCEEEEEC
T ss_pred             HHHHcCC---EEEEeCCC-------CHHHHHHhcCCC------CeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEEC
Confidence              77888   88888863       789999988643      4588889999999999999999999999999999999


Q ss_pred             ccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCC
Q 037144          271 AYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYK  348 (502)
Q Consensus       271 A~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~  348 (502)
                      +|+.+....+.  ..     ++|+++.++||++++|.+  +|+++.++. .+...+..   +....              
T Consensus       187 ~~~~~~~~~~~--~~-----~~di~~~s~sK~~~~~g~~~~G~~~~~~~-~~~~~~~~---~~~~~--------------  241 (398)
T 2rfv_A          187 TFMSPYCQQPL--QL-----GADIVVHSVTKYINGHGDVIGGIIVGKQE-FIDQARFV---GLKDI--------------  241 (398)
T ss_dssp             TTTCTTTCCGG--GG-----TCSEEEEETTTTTTCSSCCCCEEEEECHH-HHHHHHHT---HHHHT--------------
T ss_pred             CCcccccCCch--hh-----CCcEEEEeCcccccCCCCceEEEEEECHH-HHHHHHHH---HHHhC--------------
Confidence            99876553221  11     689999999999988876  577777543 22211111   11000              


Q ss_pred             cccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE--------------ecC---CCeeEEE
Q 037144          349 DWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEV--------------AFP---RNFSLVC  411 (502)
Q Consensus       349 ~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l--------------~~~---~~~~~v~  411 (502)
                          . +-....+..|++++.+  +.+...+++..++++++.+.|++.+.++-              ..+   ...++++
T Consensus       242 ----~-~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~  314 (398)
T 2rfv_A          242 ----T-GGCMSPFNAWLTLRGV--KTLGIRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIIS  314 (398)
T ss_dssp             ----T-CCCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEE
T ss_pred             ----C-CCCCCHHHHHHHHhhh--hhHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEE
Confidence                0 0011345556665554  23445556667777888888877644332              211   2467888


Q ss_pred             EEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeee----------------------EC
Q 037144          412 FRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAI----------------------VG  469 (502)
Q Consensus       412 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~----------------------~~  469 (502)
                      |.+.+.                           .....++.+++...|.. ++.+.                      ..
T Consensus       315 ~~~~~~---------------------------~~~~~~l~~~~~~~~i~-~~~G~~~~li~~~~~~~~~~~~~~~~~~~  366 (398)
T 2rfv_A          315 FEIAGG---------------------------LEAGRRMINSVELCLLA-VSLGDTETLIQHPASMTHSPVAPEERLKA  366 (398)
T ss_dssp             EEETTH---------------------------HHHHHHHHTTCSSSEEC-SCCSSSSCEEECHHHHTSSSSCHHHHHHT
T ss_pred             EEEcCC---------------------------HHHHHHHHHhCCcceec-cCCCCcceeeecccccccccCCHHHHHhc
Confidence            866421                           11233455544333321 11110                      01


Q ss_pred             C--EEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144          470 G--IYVLRFAAGNSMTMESHVRAAWTVVQEH  498 (502)
Q Consensus       470 g--~~~lR~~~~~~~t~~~di~~~~~~l~~~  498 (502)
                      |  ..++|++++ ..+++++|+++.++|+++
T Consensus       367 g~~~~~iRls~~-~~~~~~~i~~l~~al~~~  396 (398)
T 2rfv_A          367 GITDGLIRLSVG-LEDPEDIINDLEHAIRKA  396 (398)
T ss_dssp             TCCTTEEEEECC-SSCHHHHHHHHHHHHHHH
T ss_pred             CCCCCeEEEEec-CCCHHHHHHHHHHHHHhh
Confidence            2  468999997 467788999999999764

>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}

Probab=99.88  E-value=3.5e-21  Score=195.80  Aligned_cols=323  Identities=11%  Similarity=0.042  Sum_probs=210.3

Q ss_pred             HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCC-CccCcCCCC-cEEEcCCchHHHHHHHHHHHHHHHHH
Q 037144           90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLP-KSFLFSGNG-GGVIQGTTCEALLCTLTAARDRVLKK  167 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~-~~~~~~~~~-~g~~t~ggt~a~~~al~~a~~~~~~~  167 (502)
                      +..+.+.+...+. ....|....+..++++++.+|+.+.+|.+ ...     . ..++|+|+++++..++.+.+.     
T Consensus        45 ~~~v~~a~~~~~~-~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~-----~~~i~~t~g~~~al~~~~~~~~~-----  113 (396)
T 3jtx_A           45 PKVITDALTASLH-ELEKYPLTAGLPELRQACANWLKRRYDGLTVDA-----DNEILPVLGSREALFSFVQTVLN-----  113 (396)
T ss_dssp             CHHHHHHHHHTGG-GGGSCCCTTCCHHHHHHHHHHHHHHTTTCCCCT-----TTSEEEESSHHHHHHHHHHHHCC-----
T ss_pred             CHHHHHHHHHHhh-hccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCC-----CCeEEEcCCcHHHHHHHHHHHhC-----
Confidence            3445556555553 23345444556889999999999999964 111     2 589999999999887776643     


Q ss_pred             hCccCCCC-----eEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecC
Q 037144          168 IGRENISK-----LVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVG  242 (502)
Q Consensus       168 ~~~~~~~~-----~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~g  242 (502)
                            ++     +.|+++..+|.++..+++..|.   +++.+|++. +++.+|+++|++++++.+      .+|+++.+
T Consensus       114 ------~g~~~~~d~vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~-~g~~~d~~~l~~~~~~~~------~~v~l~~p  177 (396)
T 3jtx_A          114 ------PVSDGIKPAIVSPNPFYQIYEGATLLGGG---EIHFANCPA-PSFNPDWRSISEEVWKRT------KLVFVCSP  177 (396)
T ss_dssp             ------C---CCCCEEEEEESCCHHHHHHHHHTTC---EEEEEECCT-TTCCCCGGGSCHHHHHTE------EEEEEESS
T ss_pred             ------CCCccCCCEEEEcCCCcHhHHHHHHHcCC---EEEEeecCC-CCCccCHHHHHHhhccCc------EEEEEECC
Confidence                  32     6888888999999999999999   999999954 346889999999997643      47778899


Q ss_pred             CccccccCChhH---HHHHHHHhCCEEEeecccccccccCccchhhhc------CCCCCCeeEEccCCcCCC-CCcceEE
Q 037144          243 TTAITAVDPLKP---LCDVAKQFGIWVHVDAAYAGSACICPEFRHFID------GVECVDSFSFNPHKWLFT-TLDCCCL  312 (502)
Q Consensus       243 tt~~G~idpl~e---I~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~------~~~~aDsi~~~~hK~l~~-p~~~g~~  312 (502)
                      +|++|.+-|.++   |+++|++||+++++|++|+.+............      .-...+.+..+++|.++. ...+|++
T Consensus       178 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~  257 (396)
T 3jtx_A          178 NNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFV  257 (396)
T ss_dssp             CTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTSSCGGGCCEEE
T ss_pred             CCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccCcEEEEeccccccCCcccceEEE
Confidence            999999976555   999999999999999999875443211111110      012556788899997654 4567777


Q ss_pred             EeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHH
Q 037144          313 WVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF-GVANLRNFIRSHVGMAKLFER  391 (502)
Q Consensus       313 ~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~la~~l~~  391 (502)
                      +. ++.... .+.....+...                       ....+...++...+ -.+.+.+..++..++++++.+
T Consensus       258 ~~-~~~~~~-~~~~~~~~~~~-----------------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~  312 (396)
T 3jtx_A          258 AG-DAELLK-NFLLYRTYHGS-----------------------AMSIPVQRASIAAWDDEQHVIDNRRLYQEKFERVIP  312 (396)
T ss_dssp             EE-CHHHHH-HHHHHHHHHTC-----------------------CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_pred             Ee-CHHHHH-HHHHHHhhccc-----------------------CCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence            55 443322 22111000000                       00222233333322 245678888889999999999


Q ss_pred             HHhcCCCeEEecCCCee-EEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh-cCcEEEEeeeE-
Q 037144          392 LVTSDKRFEVAFPRNFS-LVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV-SGKVFMTHAIV-  468 (502)
Q Consensus       392 ~l~~~~~~~l~~~~~~~-~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~-  468 (502)
                      .|++.  +.+. .+..+ ++++.+....                             ..++.++|.+ .|..+.++..+ 
T Consensus       313 ~l~~~--~~~~-~~~~~~~~~~~~~~~~-----------------------------~~~~~~~l~~~~gi~v~~g~~~~  360 (396)
T 3jtx_A          313 ILQQV--FDVK-LPDASFYIWLKVPDGD-----------------------------DLAFARNLWQKAAIQVLPGRFLA  360 (396)
T ss_dssp             HHTTT--SCCC-CCSSSSEEEEECTTSC-----------------------------HHHHHHHHHHHHCEECEEGGGGC
T ss_pred             HHHhc--CCcc-CCCeeEEEEEECCCCC-----------------------------HHHHHHHHHHHCCEEEeCChHhC
Confidence            99875  3333 34334 4444443211                             2345555543 47654443222 


Q ss_pred             -------CCEEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144          469 -------GGIYVLRFAAGNSMTMESHVRAAWTVVQEHL  499 (502)
Q Consensus       469 -------~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~  499 (502)
                             .+..++|++++.   ++++|+++++.|.++.
T Consensus       361 ~~~~~~~~~~~~iRis~~~---~~~~i~~~l~~l~~~l  395 (396)
T 3jtx_A          361 RDTEQGNPGEGYVRIALVA---DVATCVKAAEDIVSLY  395 (396)
T ss_dssp             CCCTTCCTTTTEEEEECCS---CHHHHHHHHHHHHHHC
T ss_pred             CcccccCCCCCeEEEEEcC---CHHHHHHHHHHHHHHh
Confidence                   235799999863   6789999999998764

>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*

Probab=99.88  E-value=8.3e-21  Score=190.58  Aligned_cols=284  Identities=10%  Similarity=0.082  Sum_probs=192.6

Q ss_pred             HHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCC-eEEEeCCCCchhHHHHHHHcCCCC
Q 037144          121 VMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISK-LVVYSSDQTHCAFQKAAQIVGIDR  199 (502)
Q Consensus       121 ~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~-~~v~~s~~~H~s~~~aa~~~Glg~  199 (502)
                      +++.+++++|.+.+       ..++|+|+++++..++.+..+           ++ +.|+++..+|.++..+++..|.  
T Consensus        63 lr~~la~~~~~~~~-------~v~~~~G~~~ai~~~~~~~~~-----------~g~d~Vl~~~p~~~~~~~~~~~~g~--  122 (356)
T 1fg7_A           63 VIENYAQYAGVKPE-------QVLVSRGADEGIELLIRAFCE-----------PGKDAILYCPPTYGMYSVSAETIGV--  122 (356)
T ss_dssp             HHHHHHHHHTSCGG-------GEEEESHHHHHHHHHHHHHCC-----------TTTCEEEECSSSCTHHHHHHHHHTC--
T ss_pred             HHHHHHHHhCCChH-------HEEEcCCHHHHHHHHHHHHhC-----------CCCCEEEEeCCChHHHHHHHHHcCC--
Confidence            44456666687654       589999999999877776542           45 7888999999999999999999  


Q ss_pred             CCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHH--hCCEEEeecccccccc
Q 037144          200 KNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQ--FGIWVHVDAAYAGSAC  277 (502)
Q Consensus       200 ~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~--~g~~lhVDaA~g~~~~  277 (502)
                       +++.+|.++  ++.+|+++|+++++ +      +.+|+++.++|+||.+-|.++|.++++.  +|+++++|++|+.+..
T Consensus       123 -~~~~v~~~~--~~~~d~~~l~~~i~-~------~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~  192 (356)
T 1fg7_A          123 -ECRTVPTLD--NWQLDLQGISDKLD-G------VKVVYVCSPNNPTGQLINPQDFRTLLELTRGKAIVVADEAYIEFCP  192 (356)
T ss_dssp             -EEEECCCCT--TSCCCHHHHHTSCT-T------EEEEEEESSCTTTCCCCCHHHHHHHHHHHTTTCEEEEECTTGGGSG
T ss_pred             -EEEEeeCCC--CCCCCHHHHHHHhc-C------CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCCEEEEEccchhhcC
Confidence             999999874  57899999998885 2      3478888999999999776655554443  8999999999986541


Q ss_pred             cCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCC
Q 037144          278 ICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCR  356 (502)
Q Consensus       278 ~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr  356 (502)
                       ......... ....+.+..++||+++.| ...|+++++ ++...........|                          
T Consensus       193 -~~~~~~~~~-~~~~~i~~~s~sK~~g~~G~r~G~~~~~-~~~~~~l~~~~~~~--------------------------  243 (356)
T 1fg7_A          193 -QASLAGWLA-EYPHLAILRTLSKAFALAGLRCGFTLAN-EEVINLLMKVIAPY--------------------------  243 (356)
T ss_dssp             -GGCSGGGTT-TCTTEEEEEESSSTTCCGGGCCEEEEEC-HHHHHHHHHHSCSS--------------------------
T ss_pred             -CCcHHHHHh-hCCCEEEEecchHhhcCchhhhEEEEeC-HHHHHHHHHhcCCC--------------------------
Confidence             111111111 113467788999999743 457888774 43322111111111                          


Q ss_pred             CCCchHHHHHHHHhcHHH---HHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcc
Q 037144          357 RFRSLKLWVVIRNFGVAN---LRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYD  433 (502)
Q Consensus       357 ~~~al~~~~~l~~~g~~g---~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~  433 (502)
                      ....+..+++...+...+   +++..++..++++++.+.|++++++....++..+++.+++. .                
T Consensus       244 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~-~----------------  306 (356)
T 1fg7_A          244 PLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQVFDSETNYILARFK-A----------------  306 (356)
T ss_dssp             CSCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCCSSSEEEEEET-T----------------
T ss_pred             CCCHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEECCCCCeEEEEECC-C----------------
Confidence            013445556666665444   67888889999999999999987654444555666666553 1                


Q ss_pred             cccccchhHhhHHHHHHHHHHHHhcCcEEEEeee-ECCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144          434 QYRQFSEEERTNEFNRELLESINVSGKVFMTHAI-VGGIYVLRFAAGNSMTMESHVRAAWTVVQEH  498 (502)
Q Consensus       434 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~  498 (502)
                                    ..++.++|.+.|..+...+. +....++|+++.    +++++++++++|+++
T Consensus       307 --------------~~~l~~~L~~~gI~v~~~g~~~~~~~~iRis~~----~~~e~~~~~~~l~~~  354 (356)
T 1fg7_A          307 --------------SSAVFKSLWDQGIILRDQNKQPSLSGCLRITVG----TREESQRVIDALRAE  354 (356)
T ss_dssp             --------------HHHHHHHHHHTTEECEECTTSTTCTTEEEEECC----CHHHHHHHHHHHHTC
T ss_pred             --------------HHHHHHHHHHCCEEEEECCCCCCCCCeEEEEeC----CHHHHHHHHHHHHhh
Confidence                          23566777677865444122 222348999985    467999999998764

>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*

Probab=99.88  E-value=7.1e-22  Score=202.36  Aligned_cols=307  Identities=11%  Similarity=0.055  Sum_probs=190.5

Q ss_pred             hhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH---
Q 037144          113 AAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ---  189 (502)
Q Consensus       113 ~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~---  189 (502)
                      ....+++.+.+++++++|.+..        -+++++|++++..++.+...           +++.|+++...|.++.   
T Consensus        73 ~~~~~~~~~~~~la~~~~~~~~--------~v~~~sGs~a~~~a~~~~~~-----------~gd~v~~~~~~~~~~~~~~  133 (420)
T 3gbx_A           73 YVDVVEQLAIDRAKELFGADYA--------NVQPHSGSQANFAVYTALLQ-----------PGDTVLGMNLAQGGHLTHG  133 (420)
T ss_dssp             -CHHHHHHHHHHHHHHHTCSEE--------ECCCSSHHHHHHHHHHHHCC-----------TTCEEEEEEEC--------
T ss_pred             HHHHHHHHHHHHHHHHhCCCCc--------eeEecCcHHHHHHHHHHhcC-----------CCCEEEecchhhcceeccc
Confidence            3456787888999999998653        24456668999887766533           6778888888887743   


Q ss_pred             HHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEee
Q 037144          190 KAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVD  269 (502)
Q Consensus       190 ~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVD  269 (502)
                      ......|.+. ..+.++.+  .++.+|+++|++++++..     +.+|+++.+++  |...|+++|+++|++||+++++|
T Consensus       134 ~~~~~~g~~~-~~~~~~~~--~~~~~d~~~l~~~i~~~~-----~~~v~~~~~~~--~~~~~l~~l~~l~~~~~~~li~D  203 (420)
T 3gbx_A          134 SPVNFSGKLY-NIVPYGID--ESGKIDYDEMAKLAKEHK-----PKMIIGGFSAY--SGVVDWAKMREIADSIGAYLFVD  203 (420)
T ss_dssp             ----CHHHHS-EEEEEEEC--TTCSCCHHHHHHHHHHHC-----CSEEEECCTTC--CSCCCHHHHHHHHHHTTCEEEEE
T ss_pred             hhhhhcccce-eEEeccCC--ccCCcCHHHHHHHHHhcC-----CeEEEEecCcc--CCccCHHHHHHHHHHcCCEEEEE
Confidence            2222333310 34455555  357899999999998741     23677766554  56889999999999999999999


Q ss_pred             cccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCc--hhhhhhhcCCcccccCccCCCCCcccccCC
Q 037144          270 AAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDP--SCLLSTLSTNPQYLKNEATDQEPKEQEVGY  347 (502)
Q Consensus       270 aA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~--~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~  347 (502)
                      ++|+.+......+..   .+..+|+++.++||++++|.+ |+++.++.  ... ..+.   .+.....            
T Consensus       204 e~~~~~~~~~~~~~~---~~~~~di~~~s~sK~~~g~~g-g~~~~~~~~~~~~-~~~~---~~~~~~~------------  263 (420)
T 3gbx_A          204 MAHVAGLIAAGVYPN---PVPHAHVVTTTTHKTLAGPRG-GLILAKGGDEELY-KKLN---SAVFPSA------------  263 (420)
T ss_dssp             CTTTHHHHHTTSSCC---STTTSSEEEEESSGGGCSCSC-EEEEESSCCHHHH-HHHH---HHHC---------------
T ss_pred             CCcchhceecccCCc---ccccCCEEEeecccCCCCCCc-eEEEEcCCcHHHH-HHhh---hhcCCCC------------
Confidence            998765543222111   123589999999999977764 66666541  222 2211   1111000            


Q ss_pred             CcccccCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-CCeeEEEEEeecCcchhhhhh
Q 037144          348 KDWQITLCRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP-RNFSLVCFRVTPSAVMDKLRT  425 (502)
Q Consensus       348 ~~~~~~~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~-~~~~~v~f~~~~~~~~~~~~~  425 (502)
                           .++.. ....++..++.....+++.++.++..++++++.+.|++. +++++.+ ...+++.+.+.+...      
T Consensus       264 -----~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~------  331 (420)
T 3gbx_A          264 -----QGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLNR-GYKVVSGGTENHLFLLDLVDKNL------  331 (420)
T ss_dssp             ------CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGGGTC------
T ss_pred             -----CCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhc-CCeeccCCCCCeEEEEEcCCCCC------
Confidence                 00000 112244445555556778889999999999999999884 8998753 345666666543211      


Q ss_pred             cccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEe------eeECCEEEEEEEecCCC---CcHHHHHHHHHHHH
Q 037144          426 KYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTH------AIVGGIYVLRFAAGNSM---TMESHVRAAWTVVQ  496 (502)
Q Consensus       426 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~------~~~~g~~~lR~~~~~~~---t~~~di~~~~~~l~  496 (502)
                                           ....+.+.+.+.|..+...      ....+...+|+++....   .++++|+++++.|+
T Consensus       332 ---------------------~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRi~~~~~~~~~~~~~~i~~~~~~l~  390 (420)
T 3gbx_A          332 ---------------------TGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRIGSPAVTRRGFKEAEVKELAGWMC  390 (420)
T ss_dssp             ---------------------CHHHHHHHHHHTTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHH
T ss_pred             ---------------------CHHHHHHHHHHCCcEeccccCCCCccccCCCcceEEecchhcccCCCHHHHHHHHHHHH
Confidence                                 0234555666668654431      11122345999985332   34789999999998


Q ss_pred             HHHHh
Q 037144          497 EHLEA  501 (502)
Q Consensus       497 ~~~~~  501 (502)
                      ++.++
T Consensus       391 ~~l~~  395 (420)
T 3gbx_A          391 DVLDN  395 (420)
T ss_dssp             HHHHT
T ss_pred             HHHhC
Confidence            87653

>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}

Probab=99.88  E-value=2.8e-21  Score=194.18  Aligned_cols=308  Identities=11%  Similarity=0.067  Sum_probs=202.6

Q ss_pred             HHHHHHHHHhhcCCC---CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHH
Q 037144           90 AGIVGEMLSSGFNVV---GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLK  166 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~---~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~  166 (502)
                      +..+.+.+...+...   ...|.. +...+    +++++++++|.+.+       ..++|+||++|+..++.+...    
T Consensus        41 ~~~v~~a~~~~~~~~~~~~~~y~~-~~~~~----lr~~la~~~g~~~~-------~i~~t~g~~~al~~~~~~l~~----  104 (360)
T 3hdo_A           41 SPEVVKAILEELGPDGAALRIYPS-ASSQK----LREVAGELYGFDPS-------WIIMANGSDEVLNNLIRAFAA----  104 (360)
T ss_dssp             CHHHHHHHHHHHTTTCGGGGSCCC-SSCHH----HHHHHHHHHTCCGG-------GEEEESSHHHHHHHHHHHHCC----
T ss_pred             CHHHHHHHHHHHhcccchhhcCCC-CchHH----HHHHHHHHhCcCcc-------eEEEcCCHHHHHHHHHHHHhC----
Confidence            344555555555443   223322 23334    45556777787554       689999999999887776532    


Q ss_pred             HhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccc
Q 037144          167 KIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAI  246 (502)
Q Consensus       167 ~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~  246 (502)
                             +++.|+++..+|.++...++..|.   +++.+|++.  ++.+  +++++++        .+.+|+++.++|++
T Consensus       105 -------~gd~Vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~--~~~~--~~l~~~~--------~~~~v~i~~p~npt  162 (360)
T 3hdo_A          105 -------EGEEIGYVHPSYSYYGTLAEVQGA---RVRTFGLTG--DFRI--AGFPERY--------EGKVFFLTTPNAPL  162 (360)
T ss_dssp             -------TTCEEEEESSSCTHHHHHHHHHTC---EEEEECBCT--TSSB--TTCCSSB--------CSSEEEEESSCTTT
T ss_pred             -------CCCEEEEcCCChHHHHHHHHHCCC---EEEEeeCCC--CCCH--HHHHhhc--------CCCEEEEeCCCCCC
Confidence                   567888899999999999999999   999999975  3455  4443322        12378888899999


Q ss_pred             cccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhhhc
Q 037144          247 TAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLS  325 (502)
Q Consensus       247 G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~  325 (502)
                      |.+-|+++|.++|+++|+++++|++|+.+.-  ........ ....+.++.++||+++ .+.+.|+++. ++........
T Consensus       163 G~~~~~~~l~~l~~~~~~~li~De~~~~~~~--~~~~~~~~-~~~~~i~~~s~sK~~g~~G~r~G~~~~-~~~~~~~~~~  238 (360)
T 3hdo_A          163 GPSFPLEYIDELARRCAGMLVLDETYAEFAE--SNALELVR-RHENVVVTRTLSKSYSLAGMRIGLAIA-RPEVIAALDK  238 (360)
T ss_dssp             CCCCCHHHHHHHHHHBSSEEEEECTTGGGSS--CCCTHHHH-HCSSEEEEEESTTTTSCTTSCCEEEEC-CHHHHHHHHH
T ss_pred             CCCcCHHHHHHHHHHCCCEEEEECChHhhCC--cchhHHhc-cCCCEEEEecchHhhcCCccceeeEee-CHHHHHHHHH
Confidence            9999999999999999999999999986421  11111111 1134466779999986 4456787776 4433221111


Q ss_pred             CCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC
Q 037144          326 TNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF-GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP  404 (502)
Q Consensus       326 ~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~  404 (502)
                      ....|                          ....+..+++...+ ..+.+.++.++..++++++.+.|++. ++++. +
T Consensus       239 ~~~~~--------------------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~  290 (360)
T 3hdo_A          239 IRDHY--------------------------NLDRLAQAACVAALRDQAYLSECCRRIRETREWFTTELRSI-GYDVI-P  290 (360)
T ss_dssp             HSCSC--------------------------CSCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEC-C
T ss_pred             hCCCC--------------------------CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEc-C
Confidence            11000                          01223333333333 24567888999999999999999998 88875 5


Q ss_pred             CCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCc
Q 037144          405 RNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTM  484 (502)
Q Consensus       405 ~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~  484 (502)
                      +..+++.+......                             ..++.+.|.++|..+.......+..++|++++    +
T Consensus       291 ~~~~~~~~~~~~~~-----------------------------~~~l~~~l~~~gi~v~~~~~~~~~~~iRis~~----~  337 (360)
T 3hdo_A          291 SQGNYLFATPPDRD-----------------------------GKRVYDGLYARKVLVRHFSDPLLAHGMRISIG----T  337 (360)
T ss_dssp             CSSSEEEEECTTCC-----------------------------HHHHHHHHHHTTEECBCCCSTTTTTSEEEECC----C
T ss_pred             CCccEEEEECCCCC-----------------------------HHHHHHHHHHCCEEEEECCCCCCCCEEEEEcC----C
Confidence            56666666543211                             24566777777865433222233578999975    6


Q ss_pred             HHHHHHHHHHHHHHHH
Q 037144          485 ESHVRAAWTVVQEHLE  500 (502)
Q Consensus       485 ~~di~~~~~~l~~~~~  500 (502)
                      ++++++++++|+++.+
T Consensus       338 ~~e~~~l~~al~~~~~  353 (360)
T 3hdo_A          338 REEMEQTLAALKEIGE  353 (360)
T ss_dssp             HHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHhc
Confidence            6799999999998765

>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}

Probab=99.88  E-value=3.6e-21  Score=198.17  Aligned_cols=314  Identities=8%  Similarity=0.031  Sum_probs=208.4

Q ss_pred             cccccChhhHHHHHHHHHHHHHhc-CCCCccCcCCCCc---EEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeC
Q 037144          106 LDWISSPAAVELENIVMDWLGQML-DLPKSFLFSGNGG---GVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSS  181 (502)
Q Consensus       106 ~~~~~~p~~~~le~~~~~~l~~l~-g~~~~~~~~~~~~---g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s  181 (502)
                      ..|....+..++++.+.+++.+.. +.+.+       .   .++|+||++|+..++.+..+           +++.|+++
T Consensus        82 ~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~-------~~~~i~~t~g~~~al~~~~~~l~~-----------~gd~Vl~~  143 (430)
T 2x5f_A           82 FPYAPPQGIEELRDLWQQKMLRDNPELSID-------NMSRPIVTNALTHGLSLVGDLFVN-----------QDDTILLP  143 (430)
T ss_dssp             SSCCCTTCCHHHHHHHHHHHHHHCTTCCGG-------GBCCCEEESHHHHHHHHHHHHHCC-----------TTCEEEEE
T ss_pred             cccCCCCCCHHHHHHHHHHHhccCcccCCC-------ccceEEEcCCchHHHHHHHHHHhC-----------CCCEEEEc
Confidence            345544467889999888887764 33322       5   79999999999888776543           56788888


Q ss_pred             CCCchhHHHHHHH-cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hhHHHH
Q 037144          182 DQTHCAFQKAAQI-VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LKPLCD  257 (502)
Q Consensus       182 ~~~H~s~~~aa~~-~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~eI~~  257 (502)
                      ..+|.++...++. .|.   +++.+|+++.+ +.+|+++|++++++.   +..+.+|+++.++|++|.+-|   +++|++
T Consensus       144 ~p~y~~~~~~~~~~~g~---~~~~~~~~~~~-~~~d~~~l~~~l~~~---~~~~~~v~i~~p~nptG~~~~~~~l~~i~~  216 (430)
T 2x5f_A          144 EHNWGNYKLVFNTRNGA---NLQTYPIFDKD-GHYTTDSLVEALQSY---NKDKVIMILNYPNNPTGYTPTHKEVTTIVE  216 (430)
T ss_dssp             SSCCTHHHHHHTTTTCC---EEEEECCBCTT-SCBCSHHHHHHHHHC---CSSEEEEEECSSCTTTCCCCCHHHHHHHHH
T ss_pred             CCcCccHHHHHHHhcCC---eEEEEeccCcc-CCcCHHHHHHHHHhc---CCCCEEEEEcCCCCCCCCcCCHHHHHHHHH
Confidence            9999999999998 899   99999987532 689999999999752   122457788889999999988   899999


Q ss_pred             HHHH-----hCCEEEeecccccccccCccchh---hhcCCCCC---CeeEEccCCcCCCC-CcceEEEe--eCchhhhhh
Q 037144          258 VAKQ-----FGIWVHVDAAYAGSACICPEFRH---FIDGVECV---DSFSFNPHKWLFTT-LDCCCLWV--KDPSCLLST  323 (502)
Q Consensus       258 i~~~-----~g~~lhVDaA~g~~~~~~~~~~~---~~~~~~~a---Dsi~~~~hK~l~~p-~~~g~~~~--r~~~~l~~~  323 (502)
                      +|++     ||+++++|++|+.+.........   .+.+....   +.+..++||+++.| ..+|++++  +++.... .
T Consensus       217 ~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~-~  295 (430)
T 2x5f_A          217 AIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRVGFMTFGTSDQTTKE-V  295 (430)
T ss_dssp             HHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEBCCCHHHHH-H
T ss_pred             HHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCCCCeEEEEEecCCHHHHH-H
Confidence            9999     99999999999876543211111   12222233   56678899999744 44788887  2443322 2


Q ss_pred             hcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc-----HHHHHHHHHHHHHHHHHHHHHHh----
Q 037144          324 LSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG-----VANLRNFIRSHVGMAKLFERLVT----  394 (502)
Q Consensus       324 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-----~~g~~~~~~~~~~la~~l~~~l~----  394 (502)
                      +...........                   .-....+..+++...+.     .+.++++.+++.++++++.+.|+    
T Consensus       296 l~~~~~~~~~~~-------------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~  356 (430)
T 2x5f_A          296 LEAKVKGLIRSN-------------------ISSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVYADQY  356 (430)
T ss_dssp             HHHHHHHHHHTT-------------------TSSCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHTCGGG
T ss_pred             HHHHHhhhhhcc-------------------cCCCChHHHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence            211100000000                   00012333333333332     12233477888889999999998    


Q ss_pred             cCCCeEEecCCCeeE-EEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh-cCcEEEEeeeECCEE
Q 037144          395 SDKRFEVAFPRNFSL-VCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV-SGKVFMTHAIVGGIY  472 (502)
Q Consensus       395 ~~~~~~l~~~~~~~~-v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~g~~  472 (502)
                      +. ++++. ++..++ +++.+.+..                             ..++.++|.+ .|..+.++    +..
T Consensus       357 ~~-g~~~~-~~~~g~~~~~~~~~~~-----------------------------~~~~~~~l~~~~gi~v~~g----~~~  401 (430)
T 2x5f_A          357 HS-HWQAY-DFNSGYFMAIKVHDVD-----------------------------PEALRKHLIDKYSIGVIAL----NAT  401 (430)
T ss_dssp             TT-TEEEC-CCCBSSEEEEEESSSC-----------------------------HHHHHHHHHHHHCEECEEC----SSS
T ss_pred             CC-Cceee-CCCceEEEEeCCCCCC-----------------------------HHHHHHHHHHhCCEEEecC----CCC
Confidence            55 78876 455554 555554110                             2356666666 68654332    456


Q ss_pred             EEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          473 VLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       473 ~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      ++|++++.  +++++|+++++.|+++.++
T Consensus       402 ~iRis~~~--~~~e~i~~~~~~l~~~l~~  428 (430)
T 2x5f_A          402 DIRIAFSC--VEKDDIPHVFDSIAKAIDD  428 (430)
T ss_dssp             EEEEEGGG--SCGGGHHHHHHHHHHHHHH
T ss_pred             eEEEEEec--CCHHHHHHHHHHHHHHHHh
Confidence            89999873  4677999999999988764

>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*

Probab=99.88  E-value=3.2e-21  Score=196.60  Aligned_cols=216  Identities=11%  Similarity=0.085  Sum_probs=153.9

Q ss_pred             HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHH----
Q 037144          117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAA----  192 (502)
Q Consensus       117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa----  192 (502)
                      ...++.+.+++++|.+         ..+++++|++|+..++.+...           +++.|+++...|.++...+    
T Consensus        66 ~~~~l~~~la~~~g~~---------~~i~~~sG~~a~~~~l~~~~~-----------~gd~vl~~~~~~~~~~~~~~~~~  125 (398)
T 1gc0_A           66 TLNLLEARMASLEGGE---------AGLALASGMGAITSTLWTLLR-----------PGDEVLLGNTLYGCTFAFLHHGI  125 (398)
T ss_dssp             HHHHHHHHHHHHHTCS---------EEEEESSHHHHHHHHHHHHCC-----------TTCEEEEESSCCSHHHHHHHHTG
T ss_pred             HHHHHHHHHHHHhCCC---------cEEEECCHHHHHHHHHHHHhc-----------CCCEEEEeCCCchhHHHHHHHHH
Confidence            3445556677888875         257777789999888876632           5678888999999887765    


Q ss_pred             HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccc
Q 037144          193 QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAY  272 (502)
Q Consensus       193 ~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~  272 (502)
                      ...|+   +++.++.+       |+++|+++|+++      +.+|+++.++|++|.+.|+++|+++|++||+++|+|++|
T Consensus       126 ~~~g~---~~~~~~~~-------d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~  189 (398)
T 1gc0_A          126 GEFGV---KLRHVDMA-------DLQALEAAMTPA------TRVIYFESPANPNMHMADIAGVAKIARKHGATVVVDNTY  189 (398)
T ss_dssp             GGGTC---EEEEECTT-------CHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHGGGTCEEEEECTT
T ss_pred             HHcCC---EEEEECCC-------CHHHHHHhcCCC------CeEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCC
Confidence            56687   88888752       789999988653      458888999999999999999999999999999999999


Q ss_pred             ccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcc
Q 037144          273 AGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDW  350 (502)
Q Consensus       273 g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~  350 (502)
                      +.+....+. .      .++|+++.++||++++|.+  +|+++.++.. +...+.....++..                 
T Consensus       190 ~~~~~~~~~-~------~~~d~~~~S~sK~~~~~~~~~~G~l~~~~~~-~~~~~~~~~~~~~~-----------------  244 (398)
T 1gc0_A          190 CTPYLQRPL-E------LGADLVVHSATKYLSGHGDITAGIVVGSQAL-VDRIRLQGLKDMTG-----------------  244 (398)
T ss_dssp             THHHHCCGG-G------GTCSEEEEETTTTTTCSSSCCCEEEEECHHH-HHHHHHTHHHHHTC-----------------
T ss_pred             cccccCCch-h------hCceEEEECCccccCCCCCCeEEEEEEChHH-HHHHHHHHhhccCC-----------------
Confidence            877654331 1      1689999999999998876  5777765432 22112111111000                 


Q ss_pred             cccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 037144          351 QITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFE  400 (502)
Q Consensus       351 ~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~  400 (502)
                           -....+..|++++.+  +.+..++++..++++++.+.|+++|+++
T Consensus       245 -----~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~~~v~  287 (398)
T 1gc0_A          245 -----AVLSPHDAALLMRGI--KTLNLRMDRHCANAQVLAEFLARQPQVE  287 (398)
T ss_dssp             -----CCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHTCTTEE
T ss_pred             -----CCCCHHHHHHHHhcc--chHHHHHHHHHHHHHHHHHHHhcCCCee
Confidence                 011345566665544  4456777888888888888888876554

>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*

Probab=99.87  E-value=1.4e-21  Score=195.21  Aligned_cols=317  Identities=15%  Similarity=0.138  Sum_probs=192.6

Q ss_pred             HHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCcc
Q 037144           92 IVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRE  171 (502)
Q Consensus        92 ~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~  171 (502)
                      .+.+.+...... ...|...+...+++    +++++++|.+         ..++++|||+|+..++.+..+         
T Consensus        19 ~~~~a~~~~~~~-~~~y~~~~~~~~l~----~~la~~~g~~---------~~~~~~~gt~a~~~~~~~~~~---------   75 (347)
T 1jg8_A           19 EMRKAMAQAEVG-DDVYGEDPTINELE----RLAAETFGKE---------AALFVPSGTMGNQVSIMAHTQ---------   75 (347)
T ss_dssp             HHHHHHHTCCCC-CGGGTCCHHHHHHH----HHHHHHHTCS---------EEEEESCHHHHHHHHHHHHCC---------
T ss_pred             HHHHHHhcCCCC-CcccCCChHHHHHH----HHHHHHhCCc---------eEEEecCcHHHHHHHHHHhcC---------
Confidence            344555443321 22455556555555    5577777764         368889999999877755432         


Q ss_pred             CCCCeEEEeCCCCchhHHH---HHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccc-c
Q 037144          172 NISKLVVYSSDQTHCAFQK---AAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAI-T  247 (502)
Q Consensus       172 ~~~~~~v~~s~~~H~s~~~---aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~-G  247 (502)
                        +++.|+++..+|.+...   .+...|+   +++.+ .++  ++.+|+++|+++|++....+.++.+|+++.++|++ |
T Consensus        76 --~gd~Vl~~~~~~~~~~~~~~~~~~~g~---~~~~v-~~~--~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G  147 (347)
T 1jg8_A           76 --RGDEVILEADSHIFWYEVGAMAVLSGV---MPHPV-PGK--NGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGG  147 (347)
T ss_dssp             --TTCEEEEETTCHHHHSSTTHHHHHTCC---EEEEE-CEE--TTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTS
T ss_pred             --CCCEEEEcCcchhhhccccchhhccCe---EEEEe-cCC--CCccCHHHHHHHhccccccccCceEEEEeccccccCC
Confidence              67788889999987543   5677888   88888 432  46799999999886411011135578889999999 9


Q ss_pred             ccCC---hhHHHHHHHHhCCEEEeeccccccccc--CccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhh
Q 037144          248 AVDP---LKPLCDVAKQFGIWVHVDAAYAGSACI--CPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLS  322 (502)
Q Consensus       248 ~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~--~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~  322 (502)
                      .+-|   +++|+++|++||+++|+|+||.-+...  ........   ..+|++++++||+++.|  .|++++.++.....
T Consensus       148 ~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~---~~~d~~~~s~sK~l~~~--~G~~~~~~~~~~~~  222 (347)
T 1jg8_A          148 RVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYA---GYADSVMFCLSKGLCAP--VGSVVVGDRDFIER  222 (347)
T ss_dssp             BCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHH---HTCSEEEEESSSTTCCS--SCEEEEECHHHHHH
T ss_pred             ccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhc---ccccEEEEecccccCCC--ceEEEEcCHHHHHH
Confidence            9865   578899999999999999987421111  01111111   26889999999999877  45445555543322


Q ss_pred             hhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144          323 TLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA  402 (502)
Q Consensus       323 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~  402 (502)
                      ..... .+...                     +-+..++..+.+...+  +...+.+++..++++++.+.|+++ ++++.
T Consensus       223 ~~~~~-~~~~~---------------------~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~  277 (347)
T 1jg8_A          223 ARKAR-KMLGG---------------------GMRQAGVLAAAGIIAL--TKMVDRLKEDHENARFLALKLKEI-GYSVN  277 (347)
T ss_dssp             HHHHH-HHHTC---------------------CCSSTHHHHHHHHHHH--HHSSTTHHHHHHHHHHHHHHHHHH-TCBCC
T ss_pred             HHHHH-HHcCC---------------------chhHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhc-Cceec
Confidence            11100 01100                     0001122222222222  111122344456778888888887 77653


Q ss_pred             -cCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCC
Q 037144          403 -FPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNS  481 (502)
Q Consensus       403 -~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~  481 (502)
                       .++..+++++.++..+.                         +  ..++.++|.++|..+....    ..++|+++. .
T Consensus       278 ~~~~~~~~~~~~~~~~~~-------------------------~--~~~~~~~l~~~gi~v~~~~----~~~iRl~~~-~  325 (347)
T 1jg8_A          278 PEDVKTNMVILRTDNLKV-------------------------N--AHGFIEALRNSGVLANAVS----DTEIRLVTH-K  325 (347)
T ss_dssp             GGGCCSSEEEEECTTSSS-------------------------C--HHHHHHHHHHHTEECEEEE----TTEEEEECC-T
T ss_pred             cCCCcceEEEEEcccccC-------------------------C--HHHHHHHHHHCCCEEecCC----CCeEEEEeC-C
Confidence             24556677776642110                         0  2356666766786543321    347999974 4


Q ss_pred             CCcHHHHHHHHHHHHHHHHh
Q 037144          482 MTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       482 ~t~~~di~~~~~~l~~~~~~  501 (502)
                      .+++++++++++.|+++.++
T Consensus       326 ~~~~e~i~~~~~~l~~~l~~  345 (347)
T 1jg8_A          326 DVSRNDIEEALNIFEKLFRK  345 (347)
T ss_dssp             TSCHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHh
Confidence            56788999999999988754

>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}

Probab=99.87  E-value=7.3e-21  Score=195.09  Aligned_cols=332  Identities=9%  Similarity=-0.006  Sum_probs=212.8

Q ss_pred             CHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHH
Q 037144           88 SVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKK  167 (502)
Q Consensus        88 ~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~  167 (502)
                      .++..+.+.+..........|....+..++++.+.+|+....+.+..      ..+++|+||++|+..++.+..+     
T Consensus        56 ~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~------~~i~~t~g~~~al~~~~~~l~~-----  124 (418)
T 3rq1_A           56 VFLKTVKEEYLSLSDSEHVGYAPIAGIPDFLCAAEKECFGNFRPEGH------IRSIATAGGTGGIHHLIHNYTE-----  124 (418)
T ss_dssp             CCCHHHHHHHHTCCHHHHHSCCCTTCCHHHHHHHHHHHHGGGCCSSE------EEEEEESHHHHHHHHHHHHHSC-----
T ss_pred             cccHHHHHHHHHhcccccCCCCCCCChHHHHHHHHHHHhcccCcccc------ccEEECCchHHHHHHHHHHhcC-----
Confidence            34444566665544333345655566788999999999887764321      1589999999999888776543     


Q ss_pred             hCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecC-Cccc
Q 037144          168 IGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVG-TTAI  246 (502)
Q Consensus       168 ~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~g-tt~~  246 (502)
                            +++.|+++..+|.++...++..|.   +++.+|++++ ++.+|+++|++++++..... ...+|+++.+ +|++
T Consensus       125 ------~gd~Vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~~-~~~~d~~~l~~~l~~~~~~~-~~~~vi~~~p~~NPt  193 (418)
T 3rq1_A          125 ------PGDEVLTADWYWGAYRVICSDTGR---TLVTYSLFDE-HNNFNHEAFQNRVNELAAKQ-TNVVVIFNTPGNNPT  193 (418)
T ss_dssp             ------TTCEEEEESSCCTHHHHHHHHTTC---EEEEECSBCT-TSSBCHHHHHHHHHHHHHHC-SEEEEEEECSSCTTT
T ss_pred             ------CCCEEEECCCCchhHHHHHHHcCC---EEEEEeeeCC-CCCcCHHHHHHHHHHhhccC-CCEEEEEeCCCCCCC
Confidence                  677889999999999999999999   9999998643 47899999999998642211 1236777778 8999


Q ss_pred             cccCChhHHH---HHHH------HhCCEEEeecccccccccCccchhh---hcCCCCCC---eeEEccCCcCCC-CCcce
Q 037144          247 TAVDPLKPLC---DVAK------QFGIWVHVDAAYAGSACICPEFRHF---IDGVECVD---SFSFNPHKWLFT-TLDCC  310 (502)
Q Consensus       247 G~idpl~eI~---~i~~------~~g~~lhVDaA~g~~~~~~~~~~~~---~~~~~~aD---si~~~~hK~l~~-p~~~g  310 (502)
                      |.+-|.+++.   ++|+      +||+++++|.+|.++..........   ..++ ..|   .++.+++|.++. ....|
T Consensus       194 G~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~S~sK~~~~~G~r~G  272 (418)
T 3rq1_A          194 GYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFNKFSHL-PKEILTCVCYSLSKGFTMYGQRVG  272 (418)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGGGGGGTTC-CTTEEEEEEEESTTTTTCCSSCCE
T ss_pred             CCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHHHHHHHhc-CCCceEEEEEeCCCCCcCcCCcce
Confidence            9998766555   5555      8999999999997655321111111   1111 123   556789999874 45678


Q ss_pred             EEEe--eCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcH--------HHHHHHHH
Q 037144          311 CLWV--KDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGV--------ANLRNFIR  380 (502)
Q Consensus       311 ~~~~--r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~--------~g~~~~~~  380 (502)
                      +++.  +++.... .+.....+.....                  . .....+...++...+..        +...++.+
T Consensus       273 ~~~~~~~~~~~~~-~~~~~~~~~~~~~------------------~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~  332 (418)
T 3rq1_A          273 AMIGISDDEEIAD-EFFEVNKSTSRAT------------------W-SNICRPAMRTMANIVADPAKFKEYEAERNCYYQ  332 (418)
T ss_dssp             EEEEEESSHHHHH-HHHHHHHHHHHHH------------------T-SSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred             EEEEEeCCHHHHH-HHHHHHHHHHhhc------------------c-CCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence            7766  2444332 2211111110000                  0 00123333344433322        12335567


Q ss_pred             HHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCc
Q 037144          381 SHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGK  460 (502)
Q Consensus       381 ~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~  460 (502)
                      ++.++++++.+.|+++ |+++. ++..+++.|...+.                              ..++.+.|.+.|.
T Consensus       333 ~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~------------------------------~~~~~~~l~~~gi  380 (418)
T 3rq1_A          333 LIRDRADIFKQEAAQV-GLPML-PYRGGFFITIPTDS------------------------------ANAICEELKKEHI  380 (418)
T ss_dssp             HHHHHHHHHHHHHHHH-TCCCC-CCCSSSEEEEECTT------------------------------HHHHHHHHHHTTE
T ss_pred             HHHHHHHHHHHHHHhc-CCCCC-CCCceEEEEcCCCC------------------------------HHHHHHHHHhCCE
Confidence            7888889999999887 77765 45555555432221                              2345666666786


Q ss_pred             EEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          461 VFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       461 ~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      .+.++     ..++|++++  ..++++|+++++.|+++.++
T Consensus       381 ~v~~g-----~~~iRis~~--~~~~~~i~~~~~~l~~~l~~  414 (418)
T 3rq1_A          381 YVIAL-----ANGIRIAAC--GIPKCQMTGLAEKIYNAMKS  414 (418)
T ss_dssp             ECEEC-----SSEEEEEGG--GSCHHHHTTHHHHHHHHHHH
T ss_pred             EEecC-----CCCeEEEEe--cCCHHHHHHHHHHHHHHHHH
Confidence            54332     357999976  24677999999999998765

>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}

Probab=99.87  E-value=2.5e-20  Score=191.60  Aligned_cols=323  Identities=13%  Similarity=0.061  Sum_probs=204.5

Q ss_pred             HHHHHHHHHhhcCCCCccccc-ChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHh
Q 037144           90 AGIVGEMLSSGFNVVGLDWIS-SPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKI  168 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~~~~~~~-~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~  168 (502)
                      |..+.+.+...+...  .|.. ++...++++.    +++++|.+         .+++|+|||+|+..++.+..       
T Consensus        31 p~~~~~a~~~~~~~~--~y~~~~~~~~~l~~~----la~~~~~~---------~v~~~~ggt~al~~~l~~l~-------   88 (424)
T 2po3_A           31 RARLYERLDRALDSQ--WLSNGGPLVREFEER----VAGLAGVR---------HAVATCNATAGLQLLAHAAG-------   88 (424)
T ss_dssp             HHHHHHHHHHHHHHT--CCSSSCHHHHHHHHH----HHHHHTSS---------EEEEESCHHHHHHHHHHHHT-------
T ss_pred             hHHHHHHHHHHHhcC--CcccCCHHHHHHHHH----HHHHhCCC---------eEEEeCCHHHHHHHHHHHcC-------
Confidence            444555565555432  2443 4555666655    55555653         47999999999988877652       


Q ss_pred             CccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144          169 GRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA  248 (502)
Q Consensus       169 ~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~  248 (502)
                           +++.|+++..+|.++..+++..|+   +++.+|++++ ++.+|+++|+++++++      +.+|+++.   ++|.
T Consensus        89 -----~gd~Vlv~~~~~~~~~~~~~~~G~---~~~~v~~~~~-~~~~d~~~l~~~i~~~------~~~v~~~~---~tG~  150 (424)
T 2po3_A           89 -----LTGEVIMPSMTFAATPHALRWIGL---TPVFADIDPD-TGNLDPDQVAAAVTPR------TSAVVGVH---LWGR  150 (424)
T ss_dssp             -----CCSEEEEESSSCTHHHHHHHHTTC---EEEEECBCTT-TSSBCHHHHGGGCCTT------EEEEEEEC---GGGC
T ss_pred             -----CCCEEEECCCccHHHHHHHHHcCC---EEEEEecCCC-cCCcCHHHHHHhhCcC------CcEEEEEC---CCCC
Confidence                 346788899999999999999999   9999999853 5789999999988643      33565543   7899


Q ss_pred             cCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccC--CcCCCCCcceEEEeeCchhhhhhhcC
Q 037144          249 VDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPH--KWLFTTLDCCCLWVKDPSCLLSTLST  326 (502)
Q Consensus       249 idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~h--K~l~~p~~~g~~~~r~~~~l~~~~~~  326 (502)
                      ..++++|.++|+++|+++++|++|+.+.....  .. +.  ...|.++.++|  |+++. ...|+++.+++.........
T Consensus       151 ~~~l~~i~~la~~~~~~li~Dea~~~g~~~~~--~~-~~--~~~di~~~S~sk~K~l~~-~~~G~~v~~~~~l~~~l~~~  224 (424)
T 2po3_A          151 PCAADQLRKVADEHGLRLYFDAAHALGCAVDG--RP-AG--SLGDAEVFSFHATKAVNA-FEGGAVVTDDADLAARIRAL  224 (424)
T ss_dssp             CCCHHHHHHHHHHTTCEEEEECTTCTTCEETT--EE-TT--SSSSEEEEECCTTSSSCC-SSCEEEEESCHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHcCCEEEEECccccCCeECC--ee-cc--cccCEEEEeCCCCCCccC-CCCeEEEeCCHHHHHHHHHH
Confidence            99999999999999999999999984332211  11 11  12477777776  87765 55677666545433221110


Q ss_pred             CcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCC
Q 037144          327 NPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRN  406 (502)
Q Consensus       327 ~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~  406 (502)
                       ..+....         .+...  ......+...+..+.++..  .++++++.++..++++++.+.|+++|++++..++.
T Consensus       225 -~~~~~~~---------~~~~~--~~g~~~~~~~~~aa~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~  290 (424)
T 2po3_A          225 -HNFGFDL---------PGGSP--AGGTNAKMSEAAAAMGLTS--LDAFPEVIDRNRRNHAAYREHLADLPGVLVADHDR  290 (424)
T ss_dssp             -HBTTTTC---------TTCCT--TCCCBCCCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHTCSCTTEEECCGGG
T ss_pred             -HhcCccc---------ccccc--ccCcCCCcCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhccCCCccccCCCC
Confidence             0000000         00000  1111223344555555543  46678888999999999999999988999875332


Q ss_pred             -----eeEEEEEeecC--cchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeee--EC------C-
Q 037144          407 -----FSLVCFRVTPS--AVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAI--VG------G-  470 (502)
Q Consensus       407 -----~~~v~f~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~--~~------g-  470 (502)
                           +.++.+.+.+.  +.                           ...++.+.|.+.|..+.....  ..      + 
T Consensus       291 ~~~~~~~~~~i~~~~~~~~~---------------------------~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~  343 (424)
T 2po3_A          291 HGLNNHQYVIVEIDEATTGI---------------------------HRDLVMEVLKAEGVHTRAYFSPGCHELEPYRGQ  343 (424)
T ss_dssp             GSCCCCCCEEEEECHHHHSS---------------------------CHHHHHHHHHHTTEECBCTTCSCGGGSTTTTTS
T ss_pred             CCccccEEEEEEECCccchh---------------------------hHHHHHHHHHHCCCceecccCCccccchhhhhc
Confidence                 23455555320  00                           023566677777864322100  00      0 


Q ss_pred             -----EE-------EEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144          471 -----IY-------VLRFAAGNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       471 -----~~-------~lR~~~~~~~t~~~di~~~~~~l~~~~~  500 (502)
                           ..       .+|+++ +..++++||++++++|+++.+
T Consensus       344 g~~~~~~~~r~~~~~l~l~~-~~~~t~e~i~~~~~~L~~~~~  384 (424)
T 2po3_A          344 PHAPLPHTERLAARVLSLPT-GTAIGDDDIRRVADLLRLCAT  384 (424)
T ss_dssp             CCCCCHHHHHHHTTEEEECC-STTCCHHHHHHHHHHHHHHHH
T ss_pred             CCCCChhHHHHhcCEEEeeC-CCCCCHHHHHHHHHHHHHHHh
Confidence                 01       277764 456788899999999988764

>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*

Probab=99.87  E-value=7.6e-21  Score=193.42  Aligned_cols=216  Identities=13%  Similarity=0.092  Sum_probs=158.7

Q ss_pred             HHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHH----H
Q 037144          118 ENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAA----Q  193 (502)
Q Consensus       118 e~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa----~  193 (502)
                      ..++.+.+++++|.+         ..++++||++|+..++.+...           +++.|+++...|.+....+    +
T Consensus        68 ~~~l~~~la~~~g~~---------~~~~~~sGt~A~~~al~~~~~-----------~gd~Vi~~~~~y~~~~~~~~~~~~  127 (392)
T 3qhx_A           68 RTALEAALAAVEDAA---------FGRAFSSGMAAADCALRAMLR-----------PGDHVVIPDDAYGGTFRLIDKVFT  127 (392)
T ss_dssp             HHHHHHHHHHHTTCS---------EEEEESSHHHHHHHHHHHHCC-----------TTCEEEEETTCCHHHHHHHHHTGG
T ss_pred             HHHHHHHHHHHhCCC---------cEEEECCHHHHHHHHHHHHhC-----------CCCEEEEeCCCcchHHHHHHHHHH
Confidence            334556678888875         368899999999888876532           5678889999998776665    5


Q ss_pred             HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccc
Q 037144          194 IVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYA  273 (502)
Q Consensus       194 ~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g  273 (502)
                      ..|+   +++.+|.+       |+++|+++|+++      +.+|++..++|++|.+.|+++|+++|++||+++|+|++|+
T Consensus       128 ~~g~---~~~~v~~~-------d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~D~~~~  191 (392)
T 3qhx_A          128 GWNV---EYTPVALA-------DLDAVRAAIRPT------TRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDNTFA  191 (392)
T ss_dssp             GGTC---EEEEECTT-------CHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTT
T ss_pred             hcCc---EEEEeCCC-------CHHHHHHhhCCC------CeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEEEECCCc
Confidence            5688   88888864       899999998754      3478889999999999999999999999999999999997


Q ss_pred             cccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCccc
Q 037144          274 GSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQ  351 (502)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~  351 (502)
                      .+....+ . ..     ++|.++.++||+++.+.+  +|+++.+++.... .+......                     
T Consensus       192 ~~~~~~~-~-~~-----~~di~~~S~sK~lg~~g~~~~G~v~~~~~~~~~-~l~~~~~~---------------------  242 (392)
T 3qhx_A          192 SPALQQP-L-SL-----GADVVLHSTTKYIGGHSDVVGGALVTNDEELDQ-SFAFLQNG---------------------  242 (392)
T ss_dssp             CTTTCCG-G-GG-----TCSEEEEETTTTTTCSSCCCCEEEEESCHHHHH-HHHHHHHH---------------------
T ss_pred             ccccCCh-H-Hh-----CCcEEEEcCccccCCCCCceEEEEEECcHHHHH-HHHHHHHh---------------------
Confidence            6543222 1 11     789999999999987643  6777776544332 11110000                     


Q ss_pred             ccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144          352 ITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA  402 (502)
Q Consensus       352 ~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~  402 (502)
                        .+....++..|.+++.+  +.+..++++..++++++.+.|++.|.+.-+
T Consensus       243 --~g~~~~~~~~~~~~~~l--~~l~~~~~~~~~~~~~l~~~L~~~~~v~~v  289 (392)
T 3qhx_A          243 --AGAVPGPFDAYLTMRGL--KTLVLRMQRHSENAAAVAEFLAEHPAISTV  289 (392)
T ss_dssp             --HCCCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHTCTTEEEE
T ss_pred             --cCCCCCHHHHHHHHhhh--hHHHHHHHHHHHHHHHHHHHHhcCCCcceE
Confidence              11122456667666644  446677888899999999999999888654

>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*

Probab=99.87  E-value=1.1e-21  Score=200.51  Aligned_cols=343  Identities=12%  Similarity=0.012  Sum_probs=216.5

Q ss_pred             HHHHHHHHHHhhcCCC-CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHH
Q 037144           89 VAGIVGEMLSSGFNVV-GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKK  167 (502)
Q Consensus        89 ~~~~~~~~l~~~~n~~-~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~  167 (502)
                      ++..+.+.+...+... ...|....+..++++.+.+++.+.+|.+...    ....++|+||++++..++.+...     
T Consensus        37 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~----~~~i~~~~g~~~a~~~~~~~~~~-----  107 (410)
T 3e2y_A           37 PPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKIYQRQIDP----NEEILVAVGAYGSLFNSIQGLVD-----  107 (410)
T ss_dssp             CCHHHHHHHHHHHTCGGGGSCCCTTCCHHHHHHHHHHHHHHHTSCCCT----TTSEEEESHHHHHHHHHHHHHCC-----
T ss_pred             CCHHHHHHHHHHHhCccccCCCCCCChHHHHHHHHHHHHHHhCCCCCC----CCCEEEeCCcHHHHHHHHHHhcC-----
Confidence            3455566666555432 2345554557889999999999998874321    01689999999999888776643     


Q ss_pred             hCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCC---------CCCcccCHHHHHHHHHHHHhcCCccEEEE
Q 037144          168 IGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTK---------SSSYGLSAESVLSQINLDVEAELIPLFLC  238 (502)
Q Consensus       168 ~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~---------~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv  238 (502)
                            +++.|+++...|.++...++..|.   +++.+|+++         ..++.+|+++|+++++++      +.+|+
T Consensus       108 ------~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~~~------~~~v~  172 (410)
T 3e2y_A          108 ------PGDEVIIMVPFYDCYEPMVRMAGA---VPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSK------TKAII  172 (410)
T ss_dssp             ------TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECEECCCCSSCCBGGGEECCHHHHHTTCCTT------EEEEE
T ss_pred             ------CCCEEEEeCCCchhhHHHHHHcCC---EEEEEeccccccccccccccCCcCCHHHHHhhcCCC------ceEEE
Confidence                  567788888899999999999999   999999862         135679999999988543      44788


Q ss_pred             EecCCcccccc---CChhHHHHHHHHhCCEEEeecccccccccCccchhh--hcCCCCCCeeEEccCCcCC-CCCcceEE
Q 037144          239 ATVGTTAITAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF--IDGVECVDSFSFNPHKWLF-TTLDCCCL  312 (502)
Q Consensus       239 ~t~gtt~~G~i---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~-~p~~~g~~  312 (502)
                      ++.++|++|.+   +++++|+++|++||+++++|++|+.+..........  +......+.+..+++|+++ ....+|++
T Consensus       173 ~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~  252 (410)
T 3e2y_A          173 LNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWS  252 (410)
T ss_dssp             EESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSSCGGGCCEEE
T ss_pred             EeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEecchhhcCCCCceEEEE
Confidence            88999999999   689999999999999999999998655422111111  1111123366778999997 44667887


Q ss_pred             EeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHH------hcHHHHHHHHHHHHHHH
Q 037144          313 WVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRN------FGVANLRNFIRSHVGMA  386 (502)
Q Consensus       313 ~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~------~g~~g~~~~~~~~~~la  386 (502)
                      +.++. .+. .+........                 +   .........+..+++.      ...+.++++.++..+++
T Consensus       253 ~~~~~-~~~-~~~~~~~~~~-----------------~---~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  310 (410)
T 3e2y_A          253 IGPAH-LIK-HLQTVQQNSF-----------------Y---TCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKR  310 (410)
T ss_dssp             ECCHH-HHH-HHHHHHHTTT-----------------C---CCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHH
T ss_pred             EECHH-HHH-HHHHHHHhhc-----------------c---CCChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHH
Confidence            76433 222 1211000000                 0   0000111222233331      12456788889999999


Q ss_pred             HHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEe
Q 037144          387 KLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTH  465 (502)
Q Consensus       387 ~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~  465 (502)
                      +++.+.|+++ ++++..+....++.+.+......           .+.  ......  .  ..++.+++. +.|..+.++
T Consensus       311 ~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~-----------~~~--~~~~~~--~--~~~~~~~ll~~~gv~v~~g  372 (410)
T 3e2y_A          311 DRMVRLLNSV-GLKPIVPDGGYFIIADVSSLGAD-----------LSD--MNSDEP--Y--DYKFVKWMTKHKKLTAIPV  372 (410)
T ss_dssp             HHHHHHHHTT-TCEEEBCSBSSEEEEECGGGCCC-----------CTT--CCSSCC--H--HHHHHHHHHHHHSEECEEG
T ss_pred             HHHHHHHHHC-CCeecCCCccEEEEEEchhhhcc-----------ccc--cccccc--C--HHHHHHHHHHHcCEEEeCc
Confidence            9999999998 88877544333444444321000           000  000000  0  123444443 447654444


Q ss_pred             eeEC-------CEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144          466 AIVG-------GIYVLRFAAGNSMTMESHVRAAWTVVQEH  498 (502)
Q Consensus       466 ~~~~-------g~~~lR~~~~~~~t~~~di~~~~~~l~~~  498 (502)
                      ..+.       +..++|++++.   ++++|++++++|+++
T Consensus       373 ~~f~~~~~~~~~~~~iRis~~~---~~e~l~~~l~~l~~~  409 (410)
T 3e2y_A          373 SAFCDSKSKPHFEKLVRFCFIK---KDSTLDAAEEIFRAW  409 (410)
T ss_dssp             GGGSCTTTHHHHTTEEEEECCC---CHHHHHHHHHHHHTC
T ss_pred             hhhCCCCCCCCCCCEEEEEEcC---CHHHHHHHHHHHHhc
Confidence            3332       24799999863   788999999998753

>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*

Probab=99.87  E-value=1.4e-20  Score=192.26  Aligned_cols=213  Identities=13%  Similarity=0.125  Sum_probs=153.3

Q ss_pred             HHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHH----HHHHc
Q 037144          120 IVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQK----AAQIV  195 (502)
Q Consensus       120 ~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~----aa~~~  195 (502)
                      ++.+++++++|.+         ..++++||++|+..++.+...           +++.|+++...|.++..    .++..
T Consensus        66 ~l~~~ia~~~g~~---------~~i~~~~g~~ai~~~~~~l~~-----------~gd~Vl~~~~~y~~~~~~~~~~~~~~  125 (404)
T 1e5e_A           66 NLEGKIAFLEKTE---------ACVATSSGMGAIAATVLTILK-----------AGDHLISDECLYGCTHALFEHALTKF  125 (404)
T ss_dssp             HHHHHHHHHHTCS---------EEEEESSHHHHHHHHHHHHCC-----------TTCEEEEESCCCHHHHHHHHTHHHHT
T ss_pred             HHHHHHHHHhCCC---------cEEEeCChHHHHHHHHHHHhC-----------CCCEEEEeCCCchhHHHHHHHHHHHc
Confidence            4555667777775         367888889998877765532           56788889999998877    77888


Q ss_pred             CCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHH-hCCEEEeeccccc
Q 037144          196 GIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQ-FGIWVHVDAAYAG  274 (502)
Q Consensus       196 Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~-~g~~lhVDaA~g~  274 (502)
                      |+   +++.+|.+       |+++|+++|+++      +.+|+++.++|++|.+.|+++|+++|++ +|+++++|++|+.
T Consensus       126 g~---~~~~v~~~-------d~~~l~~~i~~~------t~~v~l~~p~NptG~v~~l~~i~~la~~~~~~~li~De~~~~  189 (404)
T 1e5e_A          126 GI---QVDFINTA-------IPGEVKKHMKPN------TKIVYFETPANPTLKIIDMERVCKDAHSQEGVLVIADNTFCS  189 (404)
T ss_dssp             TC---EEEEECTT-------STTHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHTSTTCEEEEECTTTC
T ss_pred             CC---EEEEECCC-------CHHHHHHhcCCC------CcEEEEECCCCCCCcccCHHHHHHHHHhhcCCEEEEECCCch
Confidence            99   99998864       678899888653      3488899999999999999999999999 9999999999987


Q ss_pred             ccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccc
Q 037144          275 SACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQI  352 (502)
Q Consensus       275 ~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~  352 (502)
                      +....+.  .     .++|+++.++||+++.|.+  +|++++++. .+...+.....+...                   
T Consensus       190 ~~~~~~~--~-----~~~di~~~S~sK~~~~~g~ri~G~~~~~~~-~~~~~l~~~~~~~~g-------------------  242 (404)
T 1e5e_A          190 PMITNPV--D-----FGVDVVVHSATKYINGHTDVVAGLICGKAD-LLQQIRMVGIKDITG-------------------  242 (404)
T ss_dssp             TTTCCGG--G-----GTCSEEEEETTTTTTCSSCCCCEEEEECHH-HHHHHHHTCCCCCCC-------------------
T ss_pred             hhhCCcc--c-----cCCEEEEEcCccccCCCCCCeEEEEEECHH-HHHHHHHHHHHhCCC-------------------
Confidence            7643221  1     1689999999999998876  587777644 332122211111100                   


Q ss_pred             cCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 037144          353 TLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFE  400 (502)
Q Consensus       353 ~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~  400 (502)
                         .....+..|++++.+.  .+..++++..++++.+.+.+++.+.++
T Consensus       243 ---~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~l~~~l~~~~~v~  285 (404)
T 1e5e_A          243 ---SVISPHDAWLITRGLS--TLNIRMKAESENAMKVAEYLKSHPAVE  285 (404)
T ss_dssp             ---CCCCHHHHHHHHHHHT--THHHHHHHHHHHHHHHHHHHHTCTTEE
T ss_pred             ---CCCCHHHHHHHHHhHh--HHHHHHHHHHHHHHHHHHHHHhCCCee
Confidence               0113455666666553  345667777888888888888776554

>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*

Probab=99.87  E-value=4.7e-21  Score=194.92  Aligned_cols=325  Identities=11%  Similarity=0.040  Sum_probs=204.0

Q ss_pred             HHHHHHHHh-hcCC-CCcccccChhhHHHHHHHHHHHHHhcCC---CCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHH
Q 037144           91 GIVGEMLSS-GFNV-VGLDWISSPAAVELENIVMDWLGQMLDL---PKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVL  165 (502)
Q Consensus        91 ~~~~~~l~~-~~n~-~~~~~~~~p~~~~le~~~~~~l~~l~g~---~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~  165 (502)
                      ..+.+.+.. .+.. ....|...++..++++++.+++....+.   ++..      ..++|+||++++..++......  
T Consensus        47 ~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~~------~i~~t~g~~~a~~~~~~~~~~~--  118 (397)
T 3fsl_A           47 QAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLFGADHPVLKQQRV------ATIQTLGGSGALKVGADFLKRY--  118 (397)
T ss_dssp             HHHHHHHHHHHHSCCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCE------EEEEESHHHHHHHHHHHHHHHH--
T ss_pred             HHHHHHHHhhccCccccccCCCCCchHHHHHHHHHHHhcCCcccccccce------EEEEcCCcHHHHHHHHHHHHhc--
Confidence            445555555 5544 3345666667788998988888766552   2200      3799999999998775433211  


Q ss_pred             HHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcc
Q 037144          166 KKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTA  245 (502)
Q Consensus       166 ~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~  245 (502)
                      .       +++.|+++..+|.++...++..|.   +++.+|+..++++.+|+++|++++++.   .....+|+.+.++|+
T Consensus       119 ~-------~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~v~~~~p~np  185 (397)
T 3fsl_A          119 F-------PESGVWVSDPTWENHVAIFAGAGF---EVSTYPWYDEATNGVRFNDLLATLKTL---QAGSIVLLHPCCHNP  185 (397)
T ss_dssp             C-------TTCCEEEESSCCHHHHHHHHHTTC---CEEEECCEETTTTEECHHHHHHHHTTC---CTTCEEEECSSSCTT
T ss_pred             C-------CCCeEEEeCCCchhHHHHHHHcCC---ceEEEeeeeccCCcCcHHHHHHHHHhC---CCCCEEEEeCCCCCC
Confidence            1       567788889999999999999999   999999843235799999999999742   122457888899999


Q ss_pred             cccc---CChhHHHHHHHHhCCEEEeecccccccccCc-cchhh--hcCCCCCCeeEEccCCcCCC-CCcceEEEe--eC
Q 037144          246 ITAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICP-EFRHF--IDGVECVDSFSFNPHKWLFT-TLDCCCLWV--KD  316 (502)
Q Consensus       246 ~G~i---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~-~~~~~--~~~~~~aDsi~~~~hK~l~~-p~~~g~~~~--r~  316 (502)
                      +|.+   +++++|+++|++||+++++|.+|+.+..... .....  +.+...-..+..+++|.++. ....|++++  .+
T Consensus       186 tG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~riG~~~~~~~~  265 (397)
T 3fsl_A          186 TGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIFSLYGERVGGLSVMCED  265 (397)
T ss_dssp             TCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGGGCCEEEEEECSS
T ss_pred             CCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhcCCCEEEEecccccccCcCCCeeEEEEecCC
Confidence            9999   5677999999999999999999977654311 11111  11122344667789999974 455788765  33


Q ss_pred             chhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc--------HHHHHHHHHHHHHHHHH
Q 037144          317 PSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG--------VANLRNFIRSHVGMAKL  388 (502)
Q Consensus       317 ~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g--------~~g~~~~~~~~~~la~~  388 (502)
                      +..+.........+.....                   + ....+....+...+.        .+.++++.++..+++++
T Consensus       266 ~~~~~~~~~~~~~~~~~~~-------------------~-~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~  325 (397)
T 3fsl_A          266 AEAAGRVLGQLKATVRRNY-------------------S-SPPNFGAQVVAAVLNDEALKASWLKEVEEMRTRILAMRQE  325 (397)
T ss_dssp             HHHHHHHHHHHHHHHHTTT-------------------S-SCCSHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcc-------------------C-CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3332211111000100000                   0 001222222222221        45677888899999999


Q ss_pred             HHHHHhcCC---CeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEe
Q 037144          389 FERLVTSDK---RFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTH  465 (502)
Q Consensus       389 l~~~l~~~~---~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~  465 (502)
                      +.+.|++++   ++++. ++..+++.|.-.+                               ...+.+.+.+.|.. +.+
T Consensus       326 l~~~L~~~~~~~~~~~~-~~~~~~~~~~~~~-------------------------------~~~~~~~l~~~gi~-v~~  372 (397)
T 3fsl_A          326 LVKVLSTEMPERNFDYL-LNQRGMFSYTGLS-------------------------------AAQVDRLREEFGVY-LIA  372 (397)
T ss_dssp             HHHHHHHHCTTSCCTHH-HHCCSSEEECCCC-------------------------------HHHHHHHHHTTCEE-CCT
T ss_pred             HHHHHHhcCCCCCceee-cCCceEEEecCCC-------------------------------HHHHHHHHHhCCEE-ECC
Confidence            999998864   56554 3334444442111                               12344555566754 333


Q ss_pred             eeECCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144          466 AIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEH  498 (502)
Q Consensus       466 ~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~  498 (502)
                      +   +    |++++.. ++ ++|++++++|+++
T Consensus       373 g---~----Ris~~~~-~~-~~i~~~~~~l~~~  396 (397)
T 3fsl_A          373 S---G----RMCVAGL-NT-ANVQRVAKAFAAV  396 (397)
T ss_dssp             T---C----EEEGGGC-CT-TTHHHHHHHHHHH
T ss_pred             C---C----eEEEEec-CH-hhHHHHHHHHHhh
Confidence            2   1    9998632 44 5799999999875

>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}

Probab=99.87  E-value=4.9e-20  Score=183.01  Aligned_cols=302  Identities=11%  Similarity=0.036  Sum_probs=202.1

Q ss_pred             HHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCc
Q 037144           91 GIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGR  170 (502)
Q Consensus        91 ~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~  170 (502)
                      ..+.+.+...... ...| ..+...+    +++.+++++|.+.+       ..++|+|+++++..++...          
T Consensus        32 ~~v~~a~~~~~~~-~~~y-~~~~~~~----lr~~la~~~~~~~~-------~i~~t~G~~~~l~~~~~~~----------   88 (337)
T 3p1t_A           32 PRVQAAIAAAAAR-INRY-PFDAEPR----VMRKLAEHFSCPED-------NLMLVRGIDECFDRISAEF----------   88 (337)
T ss_dssp             HHHHHHHHHHGGG-TTSC-CTTHHHH----HHHHHHHHHTSCGG-------GEEEESHHHHHHHHHHHHS----------
T ss_pred             HHHHHHHHHhhhh-hccC-CCCchHH----HHHHHHHHhCcCHH-------HEEEeCCHHHHHHHHHHhc----------
Confidence            3444555554432 2234 2344444    44556777788654       5899999999887665543          


Q ss_pred             cCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC
Q 037144          171 ENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD  250 (502)
Q Consensus       171 ~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id  250 (502)
                         +++.|+++..+|.++...++..|+   +++.+|+++  ++.+|+++|+++.        .+.+|+++.++|++|.+-
T Consensus        89 ---~gd~vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~~--------~~~~v~i~~p~nptG~~~  152 (337)
T 3p1t_A           89 ---SSMRFVTAWPGFDGYRARIAVSGL---RHFEIGLTD--DLLLDPNDLAQVS--------RDDCVVLANPSNPTGQAL  152 (337)
T ss_dssp             ---TTSEEEEESSSCSHHHHHHTTSCC---EEEEECBCT--TSSBCHHHHTTCC--------TTEEEEEESSCTTTCCCC
T ss_pred             ---CCCeEEEeCCCcHHHHHHHHHcCC---EEEEecCCC--CCCCCHHHHHhhc--------CCCEEEEeCCCCCCCCCC
Confidence               355788888999999999999999   999999875  4799999998751        134888999999999999


Q ss_pred             ChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcc
Q 037144          251 PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQ  329 (502)
Q Consensus       251 pl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~  329 (502)
                      |+++|.++|+++++ +++|.+|+.+....+.    .......+.++.++||+++ .+.++|+++.. +.... .+.....
T Consensus       153 ~~~~l~~l~~~~~~-~ivDea~~~~~~~~~~----~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~-~~~~~-~l~~~~~  225 (337)
T 3p1t_A          153 SAGELDQLRQRAGK-LLIDETYVDYSSFRAR----GLAYGENELVFRSFSKSYGLAGLRLGALFGP-SELIA-AMKRKQW  225 (337)
T ss_dssp             CHHHHHHHHHHCSE-EEEECTTGGGSSCSSS----CCCCBTTEEEEEESSSTTCCTTTCCEEEECC-HHHHH-HHHTTSC
T ss_pred             CHHHHHHHHHhCCc-EEEECCChhhcccccc----ccccCCCEEEEeeCchhccCcchheEEEEeC-HHHHH-HHHhhcC
Confidence            99999999999997 5669999764321111    1122356688889999997 55667877664 33322 2211100


Q ss_pred             cccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCee
Q 037144          330 YLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG-VANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFS  408 (502)
Q Consensus       330 yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~  408 (502)
                      +.                         ....+...++...+. .+.+.+.+++..++++++.+.|+++ ++++. ++..+
T Consensus       226 ~~-------------------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~  278 (337)
T 3p1t_A          226 FC-------------------------NVGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGL-GYRVA-SSEAN  278 (337)
T ss_dssp             TT-------------------------CSCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT-TCCBC-CCSSS
T ss_pred             CC-------------------------CCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-cCEEC-CCCCe
Confidence            00                         002233333333332 3456778888888999999999988 78765 55666


Q ss_pred             EEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHH
Q 037144          409 LVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHV  488 (502)
Q Consensus       409 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di  488 (502)
                      ++.|.....                               ..+.+.+.+.|..+.++..+....++|++++    +++++
T Consensus       279 ~~~~~~~~~-------------------------------~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~----~~~~~  323 (337)
T 3p1t_A          279 FVLVENAAG-------------------------------ERTLRFLRERGIQVKDAGQFGLHHHIRISIG----REEDN  323 (337)
T ss_dssp             EEEEECTTT-------------------------------HHHHHHHHHTTEECEEGGGGTCCSEEEEECC----CHHHH
T ss_pred             EEEEEcCCH-------------------------------HHHHHHHHHCCeEEEECccCCCCCeEEEecC----CHHHH
Confidence            766654321                               2345566667865544443444579999976    57799


Q ss_pred             HHHHHHHHHHHH
Q 037144          489 RAAWTVVQEHLE  500 (502)
Q Consensus       489 ~~~~~~l~~~~~  500 (502)
                      ++++++|+++.+
T Consensus       324 ~~l~~al~~~~~  335 (337)
T 3p1t_A          324 DRLLAALAEYSD  335 (337)
T ss_dssp             HHHHHHHHHHTC
T ss_pred             HHHHHHHHHHhh
Confidence            999999998754

>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*

Probab=99.87  E-value=2.6e-20  Score=189.25  Aligned_cols=335  Identities=10%  Similarity=0.059  Sum_probs=199.2

Q ss_pred             HHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCcc
Q 037144           92 IVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRE  171 (502)
Q Consensus        92 ~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~  171 (502)
                      .+.+.+...+...  .|...+...++|+.    +++++|.+         ..+++++||+|+..++.+++...    ...
T Consensus        16 ~~~~a~~~~~~~~--~~~~~~~~~~l~~~----la~~~~~~---------~~i~~~sGt~a~~~al~~~~~~~----~~~   76 (390)
T 3b8x_A           16 LEYKAIQSVLDSK--MFTMGEYVKQYETQ----FAKTFGSK---------YAVMVSSGSTANLLMIAALFFTK----KPR   76 (390)
T ss_dssp             HHHHHHHHHHHHT--CCSSCHHHHHHHHH----HHHHHTCS---------EEEEESCHHHHHHHHHHHTTSSS----SCS
T ss_pred             HHHHHHHHHHHcC--CCCCChHHHHHHHH----HHHHHCCC---------cEEEECCHHHHHHHHHHHHHhhh----hcC
Confidence            3334444444322  23345555666655    56666764         36889999999988887662100    000


Q ss_pred             CCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC
Q 037144          172 NISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP  251 (502)
Q Consensus       172 ~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp  251 (502)
                      ..+++.|+++..+|.++..+++..|+   +++.+|++++ ++.+|+++|+++|++++      .+|+++   +.+|...|
T Consensus        77 ~~~g~~Vi~~~~~~~~~~~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~i~~~~------~~v~~~---~~~g~~~~  143 (390)
T 3b8x_A           77 LKKGDEIIVPAVSWSTTYYPLQQYGL---RVKFVDIDIN-TLNIDIESLKEAVTDST------KAILTV---NLLGNPNN  143 (390)
T ss_dssp             CCTTCEEEEESSSCHHHHHHHHHTTC---EEEEECBCTT-TCSBCHHHHHHHCCTTE------EEEEEE---CGGGCCCC
T ss_pred             CCCcCEEEECCCCcHHHHHHHHHcCC---EEEEEecCcc-ccCcCHHHHHHHhCcCC------eEEEEE---CCccChhh
Confidence            01567899999999999999999999   9999999864 47999999999986533      356665   36788999


Q ss_pred             hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeE--EccCCcCCCCCcceEEEeeCchhhhh--hhcCC
Q 037144          252 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFS--FNPHKWLFTTLDCCCLWVKDPSCLLS--TLSTN  327 (502)
Q Consensus       252 l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~--~~~hK~l~~p~~~g~~~~r~~~~l~~--~~~~~  327 (502)
                      +++|.++|++||+++|+|+||+.+.....  +..  +. ..|..+  ..++|.+++|.+ |+++++++.....  .+...
T Consensus       144 ~~~i~~l~~~~~~~li~D~a~~~g~~~~~--~~~--g~-~~~~~~~s~~~~k~~~~g~g-G~~~~~~~~l~~~~~~~~~~  217 (390)
T 3b8x_A          144 FDEINKIIGGRDIILLEDNCESMGATFNN--KCA--GT-FGLMGTFSSFYSNHIATMEG-GCIVTDDEEIYHILLCIRAH  217 (390)
T ss_dssp             HHHHHHHHTTSCCEEEEECTTCTTCEETT--EET--TS-SSSEEEEECCTTSSSCSSSC-EEEEESCHHHHHHHHHHTBT
T ss_pred             HHHHHHHHHHcCCEEEEECcCcccCEECC--ccc--cc-ccceEEEEccCCCCCccCCc-eEEEeCCHHHHHHHHHHHhc
Confidence            99999999999999999999985544321  111  11 224444  334455655544 7777766443211  11110


Q ss_pred             cccccCcc-C-CCCCcccccCC-Ccccc-cCCCC--CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 037144          328 PQYLKNEA-T-DQEPKEQEVGY-KDWQI-TLCRR--FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEV  401 (502)
Q Consensus       328 ~~yl~~~~-~-~~~~~~~~~~~-~~~~~-~~sr~--~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l  401 (502)
                       .+..+.. . ..........+ ..+.. ..+.+  ...+..+.++..  .+.+++..++..++++++.+.|+++|++++
T Consensus       218 -g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~--l~~l~~~~~~~~~~~~~l~~~L~~~~~~~~  294 (390)
T 3b8x_A          218 -GWTRNLPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGAIGIEQ--LKKLPRFISVRRKNAEYFLDKFKDHPYLDV  294 (390)
T ss_dssp             -TBSTTSCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHTTCSSEEE
T ss_pred             -CCCccccccccccccccccccccccceeccccccCcCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcCCCCccc
Confidence             0000000 0 00000000000 00000 11222  344555666554  367888999999999999999999999988


Q ss_pred             ecCC-CeeE--EEEEeecC-cchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEE---e------eeE
Q 037144          402 AFPR-NFSL--VCFRVTPS-AVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMT---H------AIV  468 (502)
Q Consensus       402 ~~~~-~~~~--v~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~---~------~~~  468 (502)
                      ..++ ..+.  +.+.+.+. +.                           ...++.+.|.++|...-.   +      ..+
T Consensus       295 ~~~~~~~~~~~~~i~~~~~~~~---------------------------~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~  347 (390)
T 3b8x_A          295 QQETGESSWFGFSFIIKKDSGV---------------------------IRKQLVENLNSAGIECRPIVTGNFLKNTDVL  347 (390)
T ss_dssp             CCCCSBCCCCEEEEEECTTSCC---------------------------CHHHHHHHHHHTTBCCBCSTTSSGGGCHHHH
T ss_pred             CCCCCCcccEEEEEEecCcCcc---------------------------cHHHHHHHHHHCCCCeeeecCCchhhcchhh
Confidence            6532 2333  34444321 10                           023566777777764322   1      001


Q ss_pred             C--C--------------EEEEEEEecCCCCcHHHHHHHHHHH
Q 037144          469 G--G--------------IYVLRFAAGNSMTMESHVRAAWTVV  495 (502)
Q Consensus       469 ~--g--------------~~~lR~~~~~~~t~~~di~~~~~~l  495 (502)
                      .  +              ...||+++. +.++++||+++++.|
T Consensus       348 ~~~~~~~~~~~~~~~~~~~~~l~l~~~-~~~t~~di~~i~~~l  389 (390)
T 3b8x_A          348 KYFDYTVHNNVDNAEYLDKNGLFVGNH-QIELFDEIDYLREVL  389 (390)
T ss_dssp             TTCEEEESSCCHHHHHHHHHEEEEECC-SSCCHHHHHHHHHHT
T ss_pred             hcCCCCCcCCChHHHHHhcCEEEeeCC-CCCCHHHHHHHHHhh
Confidence            1  0              136999974 677888999999876

>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}

Probab=99.87  E-value=2.6e-20  Score=192.80  Aligned_cols=307  Identities=12%  Similarity=0.005  Sum_probs=201.1

Q ss_pred             CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCC
Q 037144          105 GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQT  184 (502)
Q Consensus       105 ~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~  184 (502)
                      ...|...++..++++.+.+|+.  .|++...     ...++|+|+++++..+ .....           +++.|+++...
T Consensus       104 ~~~y~~~~g~~~lr~~ia~~~~--~g~~~~~-----~~i~~t~G~~~al~~~-~~l~~-----------~gd~Vl~~~p~  164 (449)
T 3qgu_A          104 YSGYGAEQGQGALREAVASTFY--GHAGRAA-----DEIFISDGSKCDIARI-QMMFG-----------SKPTVAVQDPS  164 (449)
T ss_dssp             CCCSTTTTCCHHHHHHHHHHHH--TTTTCCG-----GGEEEESCHHHHHHHH-HHHHC-----------SSSCEEEEESC
T ss_pred             CCCCCCCCCcHHHHHHHHHHHH--cCCCCCH-----HHEEEccCHHHHHHHH-HHHhC-----------CCCEEEEcCCC
Confidence            3455555567889999888887  5553221     2689999999888654 33221           56778889999


Q ss_pred             chhHHHHHHHcCCCCCC----------EEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---
Q 037144          185 HCAFQKAAQIVGIDRKN----------IRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---  251 (502)
Q Consensus       185 H~s~~~aa~~~Glg~~~----------v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---  251 (502)
                      |.++..+++..|.   +          ++.+|++.++.+..|++++           ..+.+|+++.++|++|.+-+   
T Consensus       165 ~~~~~~~~~~~g~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~v~l~~p~NPtG~~~~~~~  230 (449)
T 3qgu_A          165 YPVYVDTSVMMGM---TGDHNGTGFDGIEYMVCNPDNHFFPDLSKA-----------KRTDIIFFCSPNNPTGAAATRAQ  230 (449)
T ss_dssp             CTHHHHHHHHHTC---SCCBCSSSBTTEEEEECCGGGTTCCCGGGC-----------CCCSEEEEESSCTTTCCCCCHHH
T ss_pred             ChhHHHHHHHcCC---cccccccccceeEEEecccccCCcCChhHc-----------CCCCEEEEeCCCCCCCCcCCHHH
Confidence            9999999999998   7          9999998644455554321           12347777799999999855   


Q ss_pred             hhHHHHHHHHhCCEEEeecccccccccCccchhh--hcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhh------
Q 037144          252 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF--IDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLS------  322 (502)
Q Consensus       252 l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~------  322 (502)
                      +++|+++|++||+++++|++|+++..........  +.+....+.+..+++|+++ .+..+|+++.++... ..      
T Consensus       231 l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~-~~~~~~~~  309 (449)
T 3qgu_A          231 LTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGVRLGWTVVPKALK-YANGEPVH  309 (449)
T ss_dssp             HHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTCTTCCCEEEECCTTCB-CTTSCBHH
T ss_pred             HHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcCCccceeEEEecCHHHH-hhhhhhHH
Confidence            8888999999999999999998765432111111  1112355688889999997 556788888754321 10      


Q ss_pred             -hhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc---HHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 037144          323 -TLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG---VANLRNFIRSHVGMAKLFERLVTSDKR  398 (502)
Q Consensus       323 -~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g---~~g~~~~~~~~~~la~~l~~~l~~~~~  398 (502)
                       .+.....+.                    .   .....+...++...+.   .+.+.++.+++.++++++.+.|++. +
T Consensus       310 ~~~~~~~~~~--------------------~---~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g  365 (449)
T 3qgu_A          310 ADWNRVMTTC--------------------F---NGASNIVQAGGLACLQPEGLKEMNAMIKFYKENAQILKTTFTEM-G  365 (449)
T ss_dssp             HHHHHHHHHS--------------------C---CCCCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-T
T ss_pred             HHHHHHhhcc--------------------c---CCCCHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHC-C
Confidence             000000000                    0   0113344444454443   3567888899999999999999998 7


Q ss_pred             eEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcEEEEeeeE--CCEEEEE
Q 037144          399 FEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKVFMTHAIV--GGIYVLR  475 (502)
Q Consensus       399 ~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~--~g~~~lR  475 (502)
                      +++..+....++.+.+.  +..                           ..++.++|.++ |.++.++..+  .+..++|
T Consensus       366 ~~~~~~~~~~~~~~~~~--~~~---------------------------~~~~~~~l~~~~gI~v~pg~~f~~~~~~~iR  416 (449)
T 3qgu_A          366 FSVYGGDDAPYIWVGFP--GKP---------------------------SWDVFAEILERCNIVTTPGSGYGPAGEGFVR  416 (449)
T ss_dssp             CCEEESSSSSEEEEECT--TSC---------------------------HHHHHHHHHHHHCEECEEGGGGCGGGTTEEE
T ss_pred             CeeeCCCCeeEEEEECC--CCC---------------------------HHHHHHHHHHHCCEEEecchHhCCCCCCeEE
Confidence            88875444555555553  110                           23556666665 7644443322  2357999


Q ss_pred             EEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          476 FAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       476 ~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      +++.   .++++|+++++.|+++.++
T Consensus       417 is~~---~~~e~i~~~l~~l~~~~~~  439 (449)
T 3qgu_A          417 ASAF---GSRENILEAVRRFKEAYGK  439 (449)
T ss_dssp             EECC---SCHHHHHHHHHHHHHHHC-
T ss_pred             EEec---CCHHHHHHHHHHHHHHHHh
Confidence            9965   3778999999999988653

>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*

Probab=99.87  E-value=1.6e-20  Score=193.45  Aligned_cols=230  Identities=11%  Similarity=0.079  Sum_probs=161.8

Q ss_pred             HHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHH----HH
Q 037144          118 ENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKA----AQ  193 (502)
Q Consensus       118 e~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a----a~  193 (502)
                      ..++.+++++++|.+.         .+++++|++|+..++.+...           +++.|+++...|.+....    ++
T Consensus       116 ~~~l~~~lA~l~g~~~---------~v~~~sG~~Ai~~al~~l~~-----------~Gd~Vi~~~~~y~~~~~~~~~~~~  175 (445)
T 1qgn_A          116 TVVLEEKISALEGAES---------TLLMASGMCASTVMLLALVP-----------AGGHIVTTTDCYRKTRIFIETILP  175 (445)
T ss_dssp             HHHHHHHHHHHHTCSE---------EEEESCHHHHHHHHHHHHSC-----------SSCEEEEETTSCHHHHHHHHHTGG
T ss_pred             HHHHHHHHHHHhCCCc---------EEEeCCHHHHHHHHHHHHhC-----------CCCEEEEcCCCchhHHHHHHHHHH
Confidence            3445566788888752         46666777998877765432           567888888888876664    45


Q ss_pred             HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccc
Q 037144          194 IVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYA  273 (502)
Q Consensus       194 ~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g  273 (502)
                      ..|+   +++.+|.+       |+++|+++|++++     +.+|+++.++|++|.+.|+++|+++|+++|+++|+|++|+
T Consensus       176 ~~G~---~v~~v~~~-------d~~~l~~ai~~~t-----v~lV~le~p~NptG~v~dl~~I~~la~~~g~~livD~a~~  240 (445)
T 1qgn_A          176 KMGI---TATVIDPA-------DVGALELALNQKK-----VNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFA  240 (445)
T ss_dssp             GGTC---EEEEECSS-------CHHHHHHHHHHSC-----EEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTT
T ss_pred             HcCC---EEEEeCCC-------CHHHHHHHhccCC-----CCEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCc
Confidence            6788   88888753       8999999998653     2488889999999999999999999999999999999998


Q ss_pred             cccccCccchhhhcCCCCCCeeEEccCCcCCCCC--cceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCccc
Q 037144          274 GSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL--DCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQ  351 (502)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~--~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~  351 (502)
                      .+....+ . .     .++|.++.++||+++.+.  ..|+++.++ ..+. .+.   .+....                 
T Consensus       241 ~~~~~~~-~-~-----~g~Div~~S~sK~~gg~gd~~~G~l~~~~-~l~~-~l~---~~~~~~-----------------  291 (445)
T 1qgn_A          241 TPLNQKA-L-A-----LGADLVLHSATKFLGGHNDVLAGCISGPL-KLVS-EIR---NLHHIL-----------------  291 (445)
T ss_dssp             CTTTCCT-T-T-----TTCSEEEECTTTTTTCSSSCCCEEEEECH-HHHH-HHH---HHHHHH-----------------
T ss_pred             ccccCCc-c-c-----cCCEEEEECCcccccccccceEEEEEECH-HHHH-HHH---HHHHHh-----------------
Confidence            6644322 1 1     178999999999997553  277777654 3222 111   010000                 


Q ss_pred             ccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCe-EEecC-----C-----------CeeEEEEEe
Q 037144          352 ITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRF-EVAFP-----R-----------NFSLVCFRV  414 (502)
Q Consensus       352 ~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~-~l~~~-----~-----------~~~~v~f~~  414 (502)
                         +-...++..|.+++.  .+.+..++++..++++++.+.|++.|++ .+..+     |           ..++++|.+
T Consensus       292 ---g~~~~~~~a~~~~~~--l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l  366 (445)
T 1qgn_A          292 ---GGALNPNAAYLIIRG--MKTLHLRVQQQNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEV  366 (445)
T ss_dssp             ---CCCCCHHHHHHHHHH--GGGHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEE
T ss_pred             ---CCCCCHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEE
Confidence               001134455665554  4566777888888999999999999988 44433     1           357888988


Q ss_pred             ec
Q 037144          415 TP  416 (502)
Q Consensus       415 ~~  416 (502)
                      .+
T Consensus       367 ~~  368 (445)
T 1qgn_A          367 DG  368 (445)
T ss_dssp             SS
T ss_pred             CC
Confidence            54

>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}

Probab=99.87  E-value=3e-20  Score=186.38  Aligned_cols=294  Identities=11%  Similarity=0.009  Sum_probs=185.2

Q ss_pred             HHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHH---HHHHc
Q 037144          119 NIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQK---AAQIV  195 (502)
Q Consensus       119 ~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~---aa~~~  195 (502)
                      .++.+++++++|.+.         .++++||++|+..++.+....-         .+.+|+++...|++...   .+...
T Consensus        51 ~~l~~~la~~~~~~~---------~i~~~~g~~a~~~a~~~~~~~g---------~~~vvi~~~~~~~~~~~~~~~~~~~  112 (359)
T 3pj0_A           51 EDFETKIAKILGKQS---------AVFFPSGTMAQQIALRIWADRK---------ENRRVAYHPLSHLEIHEQDGLKELQ  112 (359)
T ss_dssp             HHHHHHHHHHHTCSE---------EEEESCHHHHHHHHHHHHHHHH---------TCCEEEECTTCHHHHSSTTHHHHHH
T ss_pred             HHHHHHHHHHhCCCc---------EEEeCCHHHHHHHHHHHHHhcC---------CCcEEEEeccceeeehhcchHHHhc
Confidence            345566788888753         4677899999988888776530         22357777778876543   23567


Q ss_pred             CCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccc-cccCChhHH---HHHHHHhCCEEEeecc
Q 037144          196 GIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAI-TAVDPLKPL---CDVAKQFGIWVHVDAA  271 (502)
Q Consensus       196 Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~-G~idpl~eI---~~i~~~~g~~lhVDaA  271 (502)
                      |.   +++.+|.+   ++.+|+++|+++ .+      .+.+|+++.+++++ |.+.|+++|   +++|++||+|+|+|++
T Consensus       113 g~---~~~~v~~~---~~~~d~~~l~~~-~~------~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a  179 (359)
T 3pj0_A          113 QI---TPLLLGTA---NQLLTIDDIKSL-RE------PVSSVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGA  179 (359)
T ss_dssp             CC---EEEECSCT---TSCCCHHHHHTC-SS------CCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEET
T ss_pred             Cc---eEEecCCc---CCCcCHHHHHhc-cC------CceEEEEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECc
Confidence            88   88888863   468999999987 22      23478888887777 788775555   9999999999999999


Q ss_pred             cccccccC--ccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCc
Q 037144          272 YAGSACIC--PEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKD  349 (502)
Q Consensus       272 ~g~~~~~~--~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~  349 (502)
                      |..+....  .......   ..+|++++++||++++|.+ |+ ++.++.......... .......              
T Consensus       180 ~~~~~~~~~~~~~~~~~---~~~d~~~~s~sK~~~~~~g-g~-~~~~~~l~~~~~~~~-~~~~~~~--------------  239 (359)
T 3pj0_A          180 RLWEITPFYQKSAEEIC---ALFDSVYVSFYKGIGGIAG-AI-LAGNDDFVQEAKIWK-RRYGGDL--------------  239 (359)
T ss_dssp             TCGGGHHHHTCCHHHHH---TTCSEEEEESSSTTCCSSC-EE-EEECHHHHHHHHHHH-HHTTCCC--------------
T ss_pred             chhcchhhhCCCHHHhh---ccCCEEEEeccccCCCcce-EE-EECCHHHHHHHHHHH-HHhCCCc--------------
Confidence            85443211  1111211   3689999999999988855 44 445554432211100 0000000              


Q ss_pred             ccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe-cCCCeeEEEEEeecCcchhhhhhccc
Q 037144          350 WQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA-FPRNFSLVCFRVTPSAVMDKLRTKYK  428 (502)
Q Consensus       350 ~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~-~~~~~~~v~f~~~~~~~~~~~~~~~~  428 (502)
                      +.    ....+.....+++.     ..+.+++..++++++.+.|+++|++++. .++..+++.+.+....          
T Consensus       240 ~~----~~~~~~a~~~~l~~-----~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~----------  300 (359)
T 3pj0_A          240 IS----LYPYILSADYYFEK-----RIGKMAEYFEAAKGLAERFNSCSGVKTVPEVPVSNMFHVYFENSA----------  300 (359)
T ss_dssp             SC----CHHHHHHHHHHHHH-----HGGGHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEESSCH----------
T ss_pred             ch----hHHHHHHHHHHHHH-----HHHHhHHHHHHHHHHHHHHhhCCCceeeccCCcceEEEEEecCcc----------
Confidence            00    00011111222222     1245566788899999999999999986 4566777777765421          


Q ss_pred             CCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeee--ECCEEEEEEEecCC--CCcHHHHHHHHHHHHHH
Q 037144          429 NGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAI--VGGIYVLRFAAGNS--MTMESHVRAAWTVVQEH  498 (502)
Q Consensus       429 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~--~~g~~~lR~~~~~~--~t~~~di~~~~~~l~~~  498 (502)
                                      ......+.+.+.++|..+.++..  ..+..++|+++...  ..+.++++++++.|.+.
T Consensus       301 ----------------~~~~~~l~~~l~~~GV~v~~g~~~~~~~~~~~r~~i~~~~~~~~~e~l~~~l~~l~~~  358 (359)
T 3pj0_A          301 ----------------DEIGAILTKIQDETGVGISGYLQEKSADVCAFEVSVGDAFAEIPAKNLELVFRCLEKE  358 (359)
T ss_dssp             ----------------HHHHHHHHHHHHHHCEECCSCCEEEETTEEEEEEECCTTGGGSCHHHHHHHHHHHHHH
T ss_pred             ----------------chhHHHHHHHHHhcCcEecCCccccCCCceEEEEEecCccccCCHHHHHHHHHHHHhc
Confidence                            11235677777778875443322  25678999998643  24667888888877654

>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}

Probab=99.86  E-value=5e-21  Score=196.38  Aligned_cols=304  Identities=11%  Similarity=0.074  Sum_probs=186.4

Q ss_pred             HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh-HHHHHH-
Q 037144          116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA-FQKAAQ-  193 (502)
Q Consensus       116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s-~~~aa~-  193 (502)
                      .++..+.+++++++|.+..        .++++||++|+..++.++..           +++.|+++..+|.+ +...+. 
T Consensus        78 ~~~~~a~~~~~~~~~~~~~--------~v~~~~Gs~a~~~al~~~~~-----------~gd~Vi~~~~~~~~~~~~~~~~  138 (425)
T 3ecd_A           78 EVEALAIERVKRLFNAGHA--------NVQPHSGAQANGAVMLALAK-----------PGDTVLGMSLDAGGHLTHGAKP  138 (425)
T ss_dssp             HHHHHHHHHHHHHHTCSEE--------ECCCSSHHHHHHHHHHHHCC-----------TTCEEEEECC------------
T ss_pred             HHHHHHHHHHHHHhCCCCc--------eeecCchHHHHHHHHHHccC-----------CCCEEEEcccccccceecchhh
Confidence            5566666889999998652        35688999999888776632           67788888899987 323332 


Q ss_pred             -HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccc
Q 037144          194 -IVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAY  272 (502)
Q Consensus       194 -~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~  272 (502)
                       ..|.+. .++.++.++ +++.+|+++|++++++..     +.+|+++.+++  |...++++|.++|++||+++++|++|
T Consensus       139 ~~~g~~~-~~~~~~~~~-~~~~~d~~~l~~~i~~~~-----~~~v~~~~~~~--~~~~~l~~i~~l~~~~~~~li~De~~  209 (425)
T 3ecd_A          139 ALSGKWF-NALQYGVSR-DTMLIDYDQVEALAQQHK-----PSLIIAGFSAY--PRKLDFARFRAIADSVGAKLMVDMAH  209 (425)
T ss_dssp             ------C-EEEEECCCT-TTSSCCHHHHHHHHHHHC-----CSEEEEECSCC--CSCCCHHHHHHHHHHHTCEEEEECGG
T ss_pred             hhcccce-eeeecCCCc-ccCccCHHHHHHHHhhcC-----CcEEEEccccC--CCcCCHHHHHHHHHHcCCEEEEECcC
Confidence             445411 334455543 347999999999997531     23666665444  78899999999999999999999997


Q ss_pred             ccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccc
Q 037144          273 AGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQI  352 (502)
Q Consensus       273 g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~  352 (502)
                      +.+..........   +..+|+++.++||++.+|. .|+++.+++.... .+..   +.....                 
T Consensus       210 ~~g~~~~~~~~~~---~~~~di~~~s~sK~l~g~~-~g~~~~~~~~~~~-~~~~---~~~~~~-----------------  264 (425)
T 3ecd_A          210 IAGVIAAGRHANP---VEHAHVVTSTTHKTLRGPR-GGFVLTNDEEIAK-KINS---AVFPGL-----------------  264 (425)
T ss_dssp             GHHHHHTTSSCCG---GGTCSEEEEESSGGGCCCS-CEEEEESCHHHHH-HHHH---HHC--------------------
T ss_pred             hHhhhhcccccCc---hhcCcEEEecCCcccCCCC-cEEEEeCCHHHHH-HHHh---hhCccc-----------------
Confidence            6655433222111   2258999999999997664 5777666543322 2211   111000                 


Q ss_pred             cCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-CCeeEEEEEeecCcchhhhhhcccCC
Q 037144          353 TLCRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP-RNFSLVCFRVTPSAVMDKLRTKYKNG  430 (502)
Q Consensus       353 ~~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~-~~~~~v~f~~~~~~~~~~~~~~~~~~  430 (502)
                      .++.. ....+++.++.....+++.++.++..++++++.+.|.+. +++++.+ ...+++.+.+.+...           
T Consensus       265 ~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~-----------  332 (425)
T 3ecd_A          265 QGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAG-GVDLVTGGTDNHLLLVDLRPKGL-----------  332 (425)
T ss_dssp             --CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGGGTC-----------
T ss_pred             cCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhC-CCeeccCCCCceEEEEEeCCCCC-----------
Confidence            00000 012344455555556778899999999999999999985 7888753 345566666543211           


Q ss_pred             CcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeee------ECCEEEEEEEecCC---CCcHHHHHHHHHHHHHHHH
Q 037144          431 TYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAI------VGGIYVLRFAAGNS---MTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       431 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~------~~g~~~lR~~~~~~---~t~~~di~~~~~~l~~~~~  500 (502)
                                      ....+.+.+.+.|..+.....      ......+|+++...   ..++++|+++++.|+++.+
T Consensus       333 ----------------~~~~~~~~l~~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~~l~  395 (425)
T 3ecd_A          333 ----------------KGAQVEQALERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGRLILEVFE  395 (425)
T ss_dssp             ----------------CHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred             ----------------CHHHHHHHHHHcCCEecccccCCCCCCCCCccceeccchhheeccCCHHHHHHHHHHHHHHHh
Confidence                            023455666666865432210      11234799985422   2347899999999988765

>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2

Probab=99.86  E-value=1.4e-20  Score=195.84  Aligned_cols=351  Identities=12%  Similarity=0.092  Sum_probs=198.9

Q ss_pred             cccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHH
Q 037144           78 NYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTL  157 (502)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al  157 (502)
                      .|++|..+.+.  ..+.+.+...+......|...+...++++    ++++++|.+         .+++|+|||+|+..++
T Consensus        44 ~ylD~~~~~~~--~~v~~a~~~~~~~~~~~y~~~~~~~~l~~----~la~~~~~~---------~v~~t~ggt~A~~~al  108 (467)
T 1ax4_A           44 VYIDLLTDSGT--NAMSDHQWAAMITGDEAYAGSRNYYDLKD----KAKELFNYD---------YIIPAHQGRGAENILF  108 (467)
T ss_dssp             CSEECSCSSSC--CCEEHHHHHHHHTCCCCSSSCHHHHHHHH----HHHHHHCCC---------EEEEESSHHHHHHHHH
T ss_pred             eeeecccCcCC--HHHHHHHHHHHhhcccccccCccHHHHHH----HHHHHcCCC---------cEEEcCCcHHHHHHHH
Confidence            47777544332  22333333333222234555565555554    566666653         4899999999999999


Q ss_pred             HHHHHHHHHHhCccCCCCeE---EEeCCCCch-hHHHHHHHcCCCCCCEEEEecCC----C----CCcccCHHHHHHHHH
Q 037144          158 TAARDRVLKKIGRENISKLV---VYSSDQTHC-AFQKAAQIVGIDRKNIRAIKTTK----S----SSYGLSAESVLSQIN  225 (502)
Q Consensus       158 ~~a~~~~~~~~~~~~~~~~~---v~~s~~~H~-s~~~aa~~~Glg~~~v~~v~~~~----~----~~~~~d~~~Le~~i~  225 (502)
                      .++++....       +++.   |+++ ..|+ ++..++...|.   .++.++.+.    +    .++.+|+++|+++|+
T Consensus       109 ~~~~~~~~~-------~Gd~~~~viv~-~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~  177 (467)
T 1ax4_A          109 PVLLKYKQK-------EGKAKNPVFIS-NFHFDTTAAHVELNGC---KAINIVTEKAFDSETYDDWKGDFDIKKLKENIA  177 (467)
T ss_dssp             HHHHHHHHH-------TTCCSSCEEEE-SSCCHHHHHHHHHTTC---EEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHH
T ss_pred             HHHHHhhcc-------CCCccceEEEe-ccccchhhHHHhccCC---ceecccccccccccccCCcccccCHHHHHHHHH
Confidence            988763211       2333   5556 5664 55667788888   777765431    0    135799999999998


Q ss_pred             HHHhcCCccEEEEEecCCccc-ccc---CChhHHHHHHHHhCCEEEeeccccc-ccccC--------c-cchhhhc-CCC
Q 037144          226 LDVEAELIPLFLCATVGTTAI-TAV---DPLKPLCDVAKQFGIWVHVDAAYAG-SACIC--------P-EFRHFID-GVE  290 (502)
Q Consensus       226 ~~~~~g~~p~~Vv~t~gtt~~-G~i---dpl~eI~~i~~~~g~~lhVDaA~g~-~~~~~--------~-~~~~~~~-~~~  290 (502)
                      +..  ...+.+|+++.+++++ |.+   +++++|+++|++||+|+|+|++++. +..+.        + ....... -..
T Consensus       178 ~~~--~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (467)
T 1ax4_A          178 QHG--ADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYK  255 (467)
T ss_dssp             HHC--GGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGG
T ss_pred             hcC--CCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCchhhhhhhhcc
Confidence            632  0124578888889999 665   5688999999999999999998654 11100        0 0001000 002


Q ss_pred             CCCeeEEccCCcCCCCCcceEEEeeCc-hhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCch-HHHHHHH
Q 037144          291 CVDSFSFNPHKWLFTTLDCCCLWVKDP-SCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSL-KLWVVIR  368 (502)
Q Consensus       291 ~aDsi~~~~hK~l~~p~~~g~~~~r~~-~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al-~~~~~l~  368 (502)
                      .+|++++++||+++.|.| |+++.+++ ............+ .... .            +   .+.....+ ++..++.
T Consensus       256 ~~d~~~~s~sK~~g~~~G-g~~~~~d~~~l~~~~~~~~~~~-~~~~-~------------~---~~~~~~~~~a~~~~l~  317 (467)
T 1ax4_A          256 YADALTMSAKKDPLLNIG-GLVAIRDNEEIFTLARQRCVPM-EGFV-T------------Y---GGLAGRDMAAMVQGLE  317 (467)
T ss_dssp             GCSEEEEETTSTTCCSSC-EEEEESSCHHHHHHHHHHHHHH-TCST-T------------T---TTCCHHHHHHHHHHHH
T ss_pred             ccceEEEeccccCCCCcc-eEEEeCCHHHHHHHHHhhcccc-cccc-c------------c---CCccchHHHHHHHHHH
Confidence            588999999999987743 55555545 4432211111101 0000 0            0   00000111 1111333


Q ss_pred             HhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecC--cchhhhhhcccCCCcccccccchhHhhHH
Q 037144          369 NFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPS--AVMDKLRTKYKNGTYDQYRQFSEEERTNE  446 (502)
Q Consensus       369 ~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  446 (502)
                      ..-.   .+.+++..++++++.+.|++ +++++..+.....+.+.....  ..                    ...  ..
T Consensus       318 ~~~~---~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~--~~  371 (467)
T 1ax4_A          318 EGTE---EEYLHYRIGQVKYLGDRLRE-AGIPIQYPTGGHAVFVDCKKLVPQI--------------------PGD--QF  371 (467)
T ss_dssp             HTTC---HHHHHHHHHHHHHHHHHHHH-TTCCBCSSCCSSEEEEESTTTCTTS--------------------CGG--GC
T ss_pred             Hhhh---hhHHHHHHHHHHHHHHHHHh-CCCCcccCCCceEEEEehhhhcccc--------------------ccC--CC
Confidence            2211   22444555778889999987 578776554444555552110  00                    000  00


Q ss_pred             HHHHHHHHH-HhcCcEEEEeeeE--------C-----CEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144          447 FNRELLESI-NVSGKVFMTHAIV--------G-----GIYVLRFAAGNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       447 ~~~~l~~~l-~~~g~~~~~~~~~--------~-----g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~  500 (502)
                      ...++.++| .+.|..+.+.+.+        +     ...++|+++....+++++|+++++.|+++.+
T Consensus       372 ~~~~l~~~L~~~~gv~v~~~g~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~  439 (467)
T 1ax4_A          372 PAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHMDYIADALIGLKE  439 (467)
T ss_dssp             HHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTHH
T ss_pred             CHHHHHHHHHHhcCceeeecCccccccccccccccccccceEEEecccccCCHHHHHHHHHHHHHHHH
Confidence            134566676 6668655441211        0     1369999986455788899999999988764

>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*

Probab=99.86  E-value=1.3e-19  Score=188.08  Aligned_cols=317  Identities=13%  Similarity=0.066  Sum_probs=194.8

Q ss_pred             ccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCc-
Q 037144          107 DWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTH-  185 (502)
Q Consensus       107 ~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H-  185 (502)
                      .|..++...++++.    +++++|.+         .+++|+|||+|+..++.++..           +++  +++..+| 
T Consensus        70 ~y~~~~~~~~l~~~----la~~~~~~---------~~~~~~~gt~a~~~al~~l~~-----------~gd--i~~~~~~~  123 (456)
T 2ez2_A           70 AYAGSENFYHLERT----VQELFGFK---------HIVPTHQGRGAENLLSQLAIK-----------PGQ--YVAGNMYF  123 (456)
T ss_dssp             CSSSCHHHHHHHHH----HHHHHCCS---------EEEEESSHHHHHHHHHHHHCC-----------TTC--EEEESSCC
T ss_pred             hcccChhHHHHHHH----HHHHhCCC---------cEEEeCCcHHHHHHHHHHhCC-----------CCC--Eecccccc
Confidence            45566666666665    55666653         479999999999888876632           445  4556677 


Q ss_pred             hhHHHHHHHcCCCCCCEEEEecCCC----C----CcccCHHHHHHHHHHHHhcCCccEEEEEecCCc-cccccCC---hh
Q 037144          186 CAFQKAAQIVGIDRKNIRAIKTTKS----S----SYGLSAESVLSQINLDVEAELIPLFLCATVGTT-AITAVDP---LK  253 (502)
Q Consensus       186 ~s~~~aa~~~Glg~~~v~~v~~~~~----~----~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt-~~G~idp---l~  253 (502)
                      .++..++...|.   +++.++++++    .    ++.+|+++|+++|++.++  ..+.+|+++.+++ ++|.+-|   ++
T Consensus       124 ~~~~~~~~~~G~---~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~--~~~~~v~l~~p~n~ptG~~~~~~~l~  198 (456)
T 2ez2_A          124 TTTRYHQEKNGA---VFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGA--ENIAYICLAVTVNLAGGQPVSMANMR  198 (456)
T ss_dssp             HHHHHHHHHTTC---EEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCG--GGEEEEEEESSBTTTTSBCCCHHHHH
T ss_pred             chhHHHHHHcCC---EEEEecccccccccccccccCCCCHHHHHHHHHhccc--cceeEEEEeccCCCCCCccCCHHHHH
Confidence            787889999999   9999988631    1    268999999999987541  1235777887777 8998866   99


Q ss_pred             HHHHHHHHhCCEEEeecccccc---------cccCccch-h---hhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhh
Q 037144          254 PLCDVAKQFGIWVHVDAAYAGS---------ACICPEFR-H---FIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCL  320 (502)
Q Consensus       254 eI~~i~~~~g~~lhVDaA~g~~---------~~~~~~~~-~---~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l  320 (502)
                      +|+++|++||+|+|+|++|+.+         ........ .   ...  ...|.+++++||+++.| ..|+++.+++...
T Consensus       199 ~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~--~~~d~~~~S~kk~~~~~-~gG~~~~~~~~~~  275 (456)
T 2ez2_A          199 AVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMF--SYADGCTMSGKKDCLVN-IGGFLCMNDDEMF  275 (456)
T ss_dssp             HHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHH--TTCSEEEEETTTTTCCS-SCEEEEESCHHHH
T ss_pred             HHHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhc--ccCCEEEEeCcccCCCC-ceeEEEECCHHHH
Confidence            9999999999999999999763         11111110 0   011  14688888899997755 4677666555443


Q ss_pred             hhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHH-HHHHHHHHHHHHHHHHHHhcCCCe
Q 037144          321 LSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANL-RNFIRSHVGMAKLFERLVTSDKRF  399 (502)
Q Consensus       321 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~-~~~~~~~~~la~~l~~~l~~~~~~  399 (502)
                      .........+. ....                ..+.....+.. +++...  +.+ .+..++..++++++.+.|++. ++
T Consensus       276 ~~~~~~~~~~~-~~~~----------------~~~~~~~~~~a-~a~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~  334 (456)
T 2ez2_A          276 SSAKELVVVYE-GMPS----------------YGGLAGRDMEA-MAIGLR--EAMQYEYIEHRVKQVRYLGDKLKAA-GV  334 (456)
T ss_dssp             HHHHHHHHHHT-CCTT----------------TTTCCHHHHHH-HHHHHH--HHTCHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred             HHHHHHHhhcc-Cccc----------------ccCcchhHHHH-HHHHHH--HHhHHHHHHHHHHHHHHHHHHHhcC-CC
Confidence            22111111110 0000                00000011111 022211  233 466777788889999999885 78


Q ss_pred             EEecCCCeeEEEEEeec--CcchhhhhhcccCCCcccccccchhHhhHHH-HHHHHHHH-HhcCcEEEEeee--------
Q 037144          400 EVAFPRNFSLVCFRVTP--SAVMDKLRTKYKNGTYDQYRQFSEEERTNEF-NRELLESI-NVSGKVFMTHAI--------  467 (502)
Q Consensus       400 ~l~~~~~~~~v~f~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~l-~~~g~~~~~~~~--------  467 (502)
                      ++..+.....+.+.+..  .+.                    +.   .++ ...+.++| .+.|...+....        
T Consensus       335 ~~~~p~~~~~~~~~~~~~~~~~--------------------~~---~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~  391 (456)
T 2ez2_A          335 PIVEPVGGHAVFLDARRFCEHL--------------------TQ---DEFPAQSLAASIYVETGVRSMERGIISAGRNNV  391 (456)
T ss_dssp             CBCSSCCSSEEEEEHHHHTTTS--------------------CG---GGCHHHHHHHHHHHHHSEECEEESHHHHCBCTT
T ss_pred             ccccCCCceEEEEEhHHhcCCC--------------------Ch---hhccHHHHHHHHHHhcCeeeecccccccccCcc
Confidence            77654444444444421  110                    00   112 34556666 455765444221        


Q ss_pred             -----ECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          468 -----VGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       468 -----~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                           ..+..++|+++....+++++|+++++.|+++.++
T Consensus       392 ~g~~~~~~~~~iRis~~~~~~t~e~i~~~~~~l~~~l~~  430 (456)
T 2ez2_A          392 TGEHHRPKLETVRLTIPRRVYTYAHMDVVADGIIKLYQH  430 (456)
T ss_dssp             TCSBCCCSCCEEEEECCTTTCCHHHHHHHHHHHHHHHHT
T ss_pred             ccccccCCCCeEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence                 1123689999875436788999999999987653

>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*

Probab=99.86  E-value=1.1e-21  Score=197.84  Aligned_cols=319  Identities=13%  Similarity=0.108  Sum_probs=202.1

Q ss_pred             HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144           90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG  169 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~  169 (502)
                      +..+.+.+...+...  .|..++...++|+.    +++++|.+         .+++++|||+|+..++.+++-.      
T Consensus        15 ~~~v~~a~~~~~~~~--~~~~~~~~~~l~~~----la~~~~~~---------~~~~~~sGt~al~~al~~~~~~------   73 (367)
T 3nyt_A           15 KDKIDAGIQRVLRHG--QYILGPEVTELEDR----LADFVGAK---------YCISCANGTDALQIVQMALGVG------   73 (367)
T ss_dssp             HHHHHHHHHHHHHHC--CCSSCHHHHHHHHH----HHHHHTCS---------EEEEESCHHHHHHHHHHHTTCC------
T ss_pred             CHHHHHHHHHHHhcC--CccCChHHHHHHHH----HHHHhCCC---------cEEEeCCHHHHHHHHHHHhCCC------
Confidence            334445555444332  33455666666655    56666764         3799999999998888776311      


Q ss_pred             ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144          170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV  249 (502)
Q Consensus       170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i  249 (502)
                          +++.|+++..+|.++..++...|+   +++.++++++ ++.+|+++|+++|++++      .+|+   +++++|..
T Consensus        74 ----~gd~Vi~~~~~~~~~~~~~~~~G~---~~~~~~~~~~-~~~~d~~~l~~~i~~~~------~~v~---~~~~~G~~  136 (367)
T 3nyt_A           74 ----PGDEVITPGFTYVATAETVALLGA---KPVYVDIDPR-TYNLDPQLLEAAITPRT------KAII---PVSLYGQC  136 (367)
T ss_dssp             ----TTCEEEEESSSCTHHHHHHHHTTC---EEEEECBCTT-TCSBCGGGTGGGCCTTE------EEEC---CBCGGGCC
T ss_pred             ----CcCEEEECCCccHHHHHHHHHcCC---EEEEEecCCc-cCCcCHHHHHHhcCcCC------cEEE---eeCCccCh
Confidence                677899999999999999999999   9999999864 47999999999985433      3444   66789999


Q ss_pred             CChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEc--cCCcCCCCCcceEEEeeCchhhhhhhcCC
Q 037144          250 DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFN--PHKWLFTTLDCCCLWVKDPSCLLSTLSTN  327 (502)
Q Consensus       250 dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~--~hK~l~~p~~~g~~~~r~~~~l~~~~~~~  327 (502)
                      .|+++|.++|++||+++|+|++|+.+........    +. ..|.++++  +||+++.+...|+++.+++..........
T Consensus       137 ~~~~~i~~la~~~~~~li~D~a~~~g~~~~~~~~----~~-~~di~~~Sf~~~K~l~~~g~gg~~~~~~~~l~~~~~~~~  211 (367)
T 3nyt_A          137 ADFDAINAIASKYGIPVIEDAAQSFGASYKGKRS----CN-LSTVACTSFFPSAPLGCYGDGGAIFTNDDELATAIRQIA  211 (367)
T ss_dssp             CCHHHHHHHHHHTTCCBEEECTTTTTCEETTEET----TS-SSSEEEEECCTTSSSCCSSCCEEEEESCHHHHHHHHHHT
T ss_pred             hhHHHHHHHHHHcCCEEEEECccccCCeECCeec----cC-CCCEEEEECCCCCcCCCcCceeEEEeCCHHHHHHHHHHH
Confidence            9999999999999999999999975544221111    11 12778877  59999874446666665554432211100


Q ss_pred             cccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCC-
Q 037144          328 PQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRN-  406 (502)
Q Consensus       328 ~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~-  406 (502)
                       .+   ..        ...+.......+.+...+..+.++..  .+.+++..++..++++++.+.|+++ ++.+...+. 
T Consensus       212 -~~---g~--------~~~~~~~~~g~~~~~~~~~aa~~~~~--l~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~  276 (367)
T 3nyt_A          212 -RH---GQ--------DRRYHHIRVGVNSRLDTLQAAILLPK--LEIFEEEIALRQKVAAEYDLSLKQV-GIGTPFIEVN  276 (367)
T ss_dssp             -BT---TE--------EETTEECSCCCBCCCCHHHHHHHHHH--HHTHHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCTT
T ss_pred             -hc---CC--------CcCceeeccCcCCCccHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhccC-CeeccCCCCC
Confidence             00   00        00000001111222344444444443  3556778888999999999999988 465543221 


Q ss_pred             ----eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeee--------EC-----
Q 037144          407 ----FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAI--------VG-----  469 (502)
Q Consensus       407 ----~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~--------~~-----  469 (502)
                          ..++.+... .                              ...+.+.|.++|.....+..        +.     
T Consensus       277 ~~~~~~~~~~~~~-~------------------------------~~~l~~~L~~~GI~~~~~~~~~~~~~~~~~~~~~~  325 (367)
T 3nyt_A          277 NISVYAQYTVRMD-N------------------------------RESVQASLKAAGVPTAVHYPIPLNKQPAVADEKAK  325 (367)
T ss_dssp             EECCCSSEEEECS-S------------------------------HHHHHHHHHHHTCCCBCSCSSCGGGSGGGCCTTCC
T ss_pred             CceeeEEEEEEeC-C------------------------------HHHHHHHHHHCCCceeccCCCccccChhhhccCCC
Confidence                112333221 1                              23566667777863221110        00     


Q ss_pred             -------CEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144          470 -------GIYVLRFAAGNSMTMESHVRAAWTVVQEH  498 (502)
Q Consensus       470 -------g~~~lR~~~~~~~t~~~di~~~~~~l~~~  498 (502)
                             ....||+.+ ++.++++||+++++.|++.
T Consensus       326 ~~~~~~~~~~~l~lp~-~~~~t~~~i~~v~~~~~~~  360 (367)
T 3nyt_A          326 LPVGDKAATQVMSLPM-HPYLDTASIKIICAALTNL  360 (367)
T ss_dssp             CHHHHHHHHHEEEECC-CTTCCHHHHHHHHHHHHC-
T ss_pred             ChHHHHHHhCeEEccC-CCCCCHHHHHHHHHHHHHH
Confidence                   135799986 5778888999999999764

>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3

Probab=99.86  E-value=5.7e-20  Score=186.51  Aligned_cols=279  Identities=13%  Similarity=0.111  Sum_probs=187.9

Q ss_pred             HHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHH----HHHc
Q 037144          120 IVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKA----AQIV  195 (502)
Q Consensus       120 ~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a----a~~~  195 (502)
                      ++.+.+++++|.+.         .+++++|++|+..++.++..           +++.|+++...|.+....    ++..
T Consensus        56 ~l~~~la~~~~~~~---------~i~~~sGt~a~~~~~~~~~~-----------~g~~vl~~~~~~~~~~~~~~~~~~~~  115 (386)
T 1cs1_A           56 VVQRALAELEGGAG---------AVLTNTGMSAIHLVTTVFLK-----------PGDLLVAPHDCYGGSYRLFDSLAKRG  115 (386)
T ss_dssp             HHHHHHHHHHTCSE---------EEEESSHHHHHHHHHHHHCC-----------TTCEEEEETTCCHHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHhCCCc---------EEEeCCHHHHHHHHHHHHhC-----------CCCEEEEecCCcHhHHHHHHHHHHhc
Confidence            34455667777652         34456669999888776532           567788888899875543    3556


Q ss_pred             CCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccc
Q 037144          196 GIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGS  275 (502)
Q Consensus       196 Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~  275 (502)
                      |+   +++.+|.+       |+++|+++|++++      .+|+++.++|++|.+.|+++|.++|++||+++|+|++|+++
T Consensus       116 g~---~~~~~~~~-------d~~~l~~~i~~~~------~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~  179 (386)
T 1cs1_A          116 CY---RVLFVDQG-------DEQALRAALAEKP------KLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSP  179 (386)
T ss_dssp             SC---EEEEECTT-------CHHHHHHHHHTCC------SEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCT
T ss_pred             CC---EEEEeCCC-------CHHHHHHhhccCC------cEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCccc
Confidence            77   88888753       8999999997533      37888999999999999999999999999999999999887


Q ss_pred             cccCccchhhhcCCCCCCeeEEccCCcCCCCCcc--eEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCccccc
Q 037144          276 ACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDC--CCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQIT  353 (502)
Q Consensus       276 ~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~--g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~  353 (502)
                      ....+.  .     .++|.++.++||+++.|.+.  |+++++++.... .+..   +....                   
T Consensus       180 ~~~~~~--~-----~~~di~~~s~sK~~~~~~~~~~G~~~~~~~~l~~-~l~~---~~~~~-------------------  229 (386)
T 1cs1_A          180 ALQNPL--A-----LGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVT-ELAW---WANNI-------------------  229 (386)
T ss_dssp             TTCCGG--G-----GTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHH-HHHH---HHHHH-------------------
T ss_pred             ccCCcc--c-----cCceEEEEcCcccccCCCCceeEEEEeCcHHHHH-HHHH---HHHhc-------------------
Confidence            654321  1     16899999999999988764  888887644322 2211   11000                   


Q ss_pred             CCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec-C----------------CCeeEEEEEeec
Q 037144          354 LCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAF-P----------------RNFSLVCFRVTP  416 (502)
Q Consensus       354 ~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~-~----------------~~~~~v~f~~~~  416 (502)
                       +.....+..|.+++.+  +.+..+.++..++++++.+.|++++.+.-.. +                ...++++|.+..
T Consensus       230 -~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (386)
T 1cs1_A          230 -GVTGGAFDSYLLLRGL--RTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDG  306 (386)
T ss_dssp             -TCBCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS
T ss_pred             -CCCCCHHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEECC
Confidence             0001233444444433  4456677778888999999998887665331 1                125677887643


Q ss_pred             CcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC---------------------------
Q 037144          417 SAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG---------------------------  469 (502)
Q Consensus       417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~---------------------------  469 (502)
                      .                              ...+.+.+.+.|.+. ....++                           
T Consensus       307 ~------------------------------~~~~~~~l~~~gi~~-~~~~~g~~~sl~~~~~~~~~~~~~~~~~~~~g~  355 (386)
T 1cs1_A          307 D------------------------------EQTLRRFLGGLSLFT-LAESLGGVESLISHAATMTHAGMAPEARAAAGI  355 (386)
T ss_dssp             C------------------------------HHHHHHHHHTCSSSE-EBSCCCSSSCEEEEGGGTTTTTSCHHHHHHHTC
T ss_pred             C------------------------------HHHHHHHHHhCCcce-EcccCCCcceeeecccccccccCCHHHHHhcCC
Confidence            1                              124455566667643 211111                           


Q ss_pred             CEEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144          470 GIYVLRFAAGNSMTMESHVRAAWTVVQEHL  499 (502)
Q Consensus       470 g~~~lR~~~~~~~t~~~di~~~~~~l~~~~  499 (502)
                      ...++|+++.. .+++++|+++.++|+++.
T Consensus       356 ~~~~iRis~~~-~~~~~~i~~l~~al~~~~  384 (386)
T 1cs1_A          356 SETLLRISTGI-EDGEDLIADLENGFRAAN  384 (386)
T ss_dssp             CTTEEEEECCS-SCHHHHHHHHHHHHHHHT
T ss_pred             CCCeEEEEEcc-CCHHHHHHHHHHHHHHhh
Confidence            13689999875 577779999999998764

>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*

Probab=99.86  E-value=6.6e-20  Score=188.52  Aligned_cols=326  Identities=12%  Similarity=0.082  Sum_probs=205.0

Q ss_pred             cccChhhHHHHHHHHHHHHHhcCCCCccC-c-CCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCc
Q 037144          108 WISSPAAVELENIVMDWLGQMLDLPKSFL-F-SGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTH  185 (502)
Q Consensus       108 ~~~~p~~~~le~~~~~~l~~l~g~~~~~~-~-~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H  185 (502)
                      |....+..++.+++.+++++.+|.+.... . .+....++|+|+++++..++.+..+           +++.|++...+|
T Consensus        74 Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~-----------~gd~Vlv~~p~y  142 (425)
T 2r2n_A           74 YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIIN-----------PGDNVLLDEPAY  142 (425)
T ss_dssp             CCCTTCCHHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCC-----------TTCEEEEESSCC
T ss_pred             CCCCCCCHHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCC-----------CCCEEEEeCCCc
Confidence            44445567889999999999999864100 0 0001589999999999877776543           567888899999


Q ss_pred             hhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHH------hcCCccEEEEE-ecCCccccccCChh---HH
Q 037144          186 CAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDV------EAELIPLFLCA-TVGTTAITAVDPLK---PL  255 (502)
Q Consensus       186 ~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~------~~g~~p~~Vv~-t~gtt~~G~idpl~---eI  255 (502)
                      .++...++..|.   +++.+|++.  + .+|+++|++++++..      ..+..+.+|++ ..++|+||.+-|.+   +|
T Consensus       143 ~~~~~~~~~~g~---~~~~v~~~~--~-~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l  216 (425)
T 2r2n_A          143 SGTLQSLHPLGC---NIINVASDE--S-GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEI  216 (425)
T ss_dssp             HHHHHHHGGGTC---EEEEECEET--T-EECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHH
T ss_pred             HHHHHHHHHcCC---EEEEeCcCC--C-CCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHH
Confidence            999999999999   999999874  2 499999999986311      00112335544 67899999997755   99


Q ss_pred             HHHHHHhCCEEEeecccccccccCccchhhhc-CCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCc
Q 037144          256 CDVAKQFGIWVHVDAAYAGSACICPEFRHFID-GVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNE  334 (502)
Q Consensus       256 ~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~-~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~  334 (502)
                      +++|++||+++++|++|+.+.+.......... .....+.+..+++|+++....+|+++.++. .. +.+........  
T Consensus       217 ~~~a~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~~GlRiG~~~~~~~-l~-~~l~~~~~~~~--  292 (425)
T 2r2n_A          217 YELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIISSGLRIGFLTGPKP-LI-ERVILHIQVST--  292 (425)
T ss_dssp             HHHHHHTTCEEEEECTTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTTCSTTCCEEEEEEHH-HH-HHHHHHHHTTT--
T ss_pred             HHHHHHcCCEEEEECCcccccCCCCCCCCccccCCCCCEEEEccchhhccCccceEEEecCHH-HH-HHHHHHHHHhc--
Confidence            99999999999999999865432211111110 111334667889999973345788887643 22 22211000000  


Q ss_pred             cCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcH----HHHHHHHHHHHHHHHHHHHHHhc-CCCeEEecCCCee-
Q 037144          335 ATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGV----ANLRNFIRSHVGMAKLFERLVTS-DKRFEVAFPRNFS-  408 (502)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~----~g~~~~~~~~~~la~~l~~~l~~-~~~~~l~~~~~~~-  408 (502)
                                     +   +........+..+++.++.    +.++++.+++.++++++.+.|++ .|++..+..|..+ 
T Consensus       293 ---------------~---~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p~~g~  354 (425)
T 2r2n_A          293 ---------------L---HPSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGM  354 (425)
T ss_dssp             ---------------C---SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCSBSS
T ss_pred             ---------------C---CCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCCCceE
Confidence                           0   0000111222333333222    34566677788889999999987 6777433334434 


Q ss_pred             EEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC-----CEEEEEEEecCCCC
Q 037144          409 LVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG-----GIYVLRFAAGNSMT  483 (502)
Q Consensus       409 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-----g~~~lR~~~~~~~t  483 (502)
                      ++++.+....                     +   ..   ..+.+.+.+.|..+.++..+.     +..++|++++.  .
T Consensus       355 ~~~~~~~~~~---------------------~---~~---~~~~~~l~~~gv~v~pg~~f~~~~~~~~~~iRis~~~--~  405 (425)
T 2r2n_A          355 FLWIKVKGIN---------------------D---VK---ELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSS--A  405 (425)
T ss_dssp             EEEEEETTCS---------------------C---CH---HHHHTHHHHTTEECEEGGGGSSSTTSCCCEEEEECSS--C
T ss_pred             EEEEEeCCCC---------------------C---HH---HHHHHHHHHCCcEEechhhhcCCCCCCCCEEEEEeCC--C
Confidence            4455553210                     0   01   124555666786554443332     24789999863  4


Q ss_pred             cHHHHHHHHHHHHHHHHh
Q 037144          484 MESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       484 ~~~di~~~~~~l~~~~~~  501 (502)
                      ++++|+++++.|.++.++
T Consensus       406 ~~~~i~~~~~~l~~~l~~  423 (425)
T 2r2n_A          406 SPEQMDVAFQVLAQLIKE  423 (425)
T ss_dssp             CHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHH
Confidence            778999999999988754

>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*

Probab=99.77  E-value=1.7e-23  Score=212.89  Aligned_cols=333  Identities=10%  Similarity=0.021  Sum_probs=216.1

Q ss_pred             HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144           90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG  169 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~  169 (502)
                      +..+.+.+...+......|...  ..++++++.+|+.+.+|.+...     ...++|+||++++..++.+...       
T Consensus        46 ~~~v~~a~~~~~~~~~~~y~~~--~~~l~~~la~~l~~~~g~~~~~-----~~v~~~~g~~~a~~~~~~~~~~-------  111 (392)
T 3b1d_A           46 MPEVKQAIHDYAEQLVYGYTYA--SDELLQAVLDWEKSEHQYSFDK-----EDIVFVEGVVPAISIAIQAFTK-------  111 (392)
Confidence            3445555555554333344432  6789999999999988853221     2588999999999888777643       


Q ss_pred             ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCC-CCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144          170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTK-SSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA  248 (502)
Q Consensus       170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~-~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~  248 (502)
                          +++.|++...+|.++..+++..|.   +++.+|.++ ++++.+|+++|++++++..     +.+|+++.++|++|.
T Consensus       112 ----~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~g~~~~d~~~l~~~l~~~~-----~~~v~~~~~~nptG~  179 (392)
T 3b1d_A          112 ----EGEAVLINSPVYPPFARSVRLNNR---KLVSNSLKEENGLFQIDFEQLENDIVEND-----VKLYLLCNPHNPGGR  179 (392)
Confidence                466788888999999999999999   999999853 2346799999999997321     235667889999999


Q ss_pred             cCC---hhHHHHHHHHhCCEEEeecccccccccCccchhhh---cCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhh
Q 037144          249 VDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFI---DGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLL  321 (502)
Q Consensus       249 idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~---~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~  321 (502)
                      +-|   +++|+++|++||+++++|++|+.+...........   ......+.+..+++|+++ ....+|+++++++....
T Consensus       180 ~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~  259 (392)
T 3b1d_A          180 VWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENPTLCA  259 (392)
Confidence            854   99999999999999999999987654321111111   111234567788999997 45567888876543322


Q ss_pred             hhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc-CCCeE
Q 037144          322 STLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTS-DKRFE  400 (502)
Q Consensus       322 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~-~~~~~  400 (502)
                       .+.......                   ++..........+..+++. +.+.++++.++..++++++.+.|++ +|+++
T Consensus       260 -~~~~~~~~~-------------------~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~  318 (392)
T 3b1d_A          260 -QFKHQQLVN-------------------NHHEVSSLGYIATETAYRY-GKPWLVALKAVLEENIQFAVEYFAQEAPRLK  318 (392)
Confidence             121110000                   0000011111222233332 3456778888888999999999988 78887


Q ss_pred             EecCCCeeEEE-EEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeEC--CEEEEEE
Q 037144          401 VAFPRNFSLVC-FRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVG--GIYVLRF  476 (502)
Q Consensus       401 l~~~~~~~~v~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lR~  476 (502)
                      +. ++..+++. +.+...+                           ....++.+++. +.|..+.++..+.  +..++|+
T Consensus       319 ~~-~~~~~~~~~i~~~~~~---------------------------~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi  370 (392)
T 3b1d_A          319 VM-KPQGTYLIWLDFSDYG---------------------------LTDDALFTLLHDQAKVILNRGSDYGSEGELHARL  370 (392)
Confidence            76 45555554 4443210                           01235666665 5676554443332  4678999


Q ss_pred             EecCCCCcHHHHHHHHHHHHHHHH
Q 037144          477 AAGNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       477 ~~~~~~t~~~di~~~~~~l~~~~~  500 (502)
                      +++.   ++++|+++++.|.++.+
T Consensus       371 ~~~~---~~e~i~~~l~~l~~~l~  391 (392)
T 3b1d_A          371 NIAA---PKSLVEEICKRIVCCLP  391 (392)
Confidence            9763   46799999999988754

>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}

Probab=99.86  E-value=2.3e-20  Score=188.75  Aligned_cols=309  Identities=10%  Similarity=0.067  Sum_probs=194.9

Q ss_pred             ChhhHHHHHHHHHHH-HHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHH-HHHHHHHhCccCCCCeEEEeCCCCchhH
Q 037144          111 SPAAVELENIVMDWL-GQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAA-RDRVLKKIGRENISKLVVYSSDQTHCAF  188 (502)
Q Consensus       111 ~p~~~~le~~~~~~l-~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a-~~~~~~~~~~~~~~~~~v~~s~~~H~s~  188 (502)
                      +|...++|++    + ++++|...        ..++++|||+|+..++.+. ..           +++.|+++...|.++
T Consensus        35 ~~~~~~l~~~----~~a~~~g~~~--------~~v~~~sgt~al~~al~~l~~~-----------~Gd~Vi~~~~~~~~~   91 (377)
T 3ju7_A           35 GPINQRFEQT----IMSGFFQNRG--------AVTTVANATLGLMAAIQLKKRK-----------KGKYALMPSFTFPAT   91 (377)
T ss_dssp             CHHHHHHHHH----HHHHTSTTCS--------EEEEESCHHHHHHHHHHHHSCT-----------TCCEEEEESSSCTHH
T ss_pred             CHHHHHHHHH----HHHHHhCCCC--------eEEEeCCHHHHHHHHHHHcCCC-----------CcCEEEECCCCcHHH
Confidence            5666666665    5 77777322        4799999999998887765 22           678899999999999


Q ss_pred             HHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHH-HHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEE
Q 037144          189 QKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQI-NLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVH  267 (502)
Q Consensus       189 ~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i-~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lh  267 (502)
                      ..++...|+   +++.++++++ ++.+|+++|++++ +++.    ++.+|+   +++++|...|+++|.++|+ +|+++|
T Consensus        92 ~~~~~~~G~---~~~~v~~~~~-~~~~d~~~l~~~i~~~~~----~tk~v~---~~~~~G~~~~~~~i~~la~-~~~~vi  159 (377)
T 3ju7_A           92 PLAAIWCGL---EPYFIDISID-DWYMDKTVLWDKIEELKE----EVAIVV---PYATFGSWMNLEEYEELEK-KGVPVV  159 (377)
T ss_dssp             HHHHHHTTC---EEEEECBCTT-TCSBCHHHHHHHHHHHGG----GEEEEC---CBCGGGBCCCCHHHHHHHH-TTCCBE
T ss_pred             HHHHHHcCC---EEEEEecCCc-cCCcCHHHHHHHHhcCCC----CceEEE---EECCCCCccCHHHHHHHHh-cCCEEE
Confidence            999999999   9999999853 6899999999998 4431    122454   4567899999999999999 999999


Q ss_pred             eecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCC
Q 037144          268 VDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGY  347 (502)
Q Consensus       268 VDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~  347 (502)
                      +|+||+.+.....  +..-.....++.+++++||++++ ...|+++++++.......... .+    ...     .....
T Consensus       160 ~D~a~a~g~~~~~--~~~g~~~~d~~~~S~~~~K~l~~-g~gG~~~~~~~~l~~~~~~~~-~~----g~~-----~~~~~  226 (377)
T 3ju7_A          160 VDAAPGFGLMNGG--MHYGQDFSGMIIYSFHATKPFGI-GEGGLIYSKNEEDIQRIKRMG-NF----GFD-----TNREC  226 (377)
T ss_dssp             EECTTCTTCEETT--EETTTTCSSEEEEECBTTSSSCC-BSCEEEEESCHHHHHHHHHHT-BT----TBC-----TTSCB
T ss_pred             EECCCccCCeECC--EeccCCCCcEEEEECCCCCcCCC-CCcEEEEECCHHHHHHHHHHH-hc----CCC-----CCCce
Confidence            9999976543211  11101112455666678999986 356666666654332211100 00    000     00000


Q ss_pred             CcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe-cCCC----e-eEEEEEeecCcchh
Q 037144          348 KDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA-FPRN----F-SLVCFRVTPSAVMD  421 (502)
Q Consensus       348 ~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~-~~~~----~-~~v~f~~~~~~~~~  421 (502)
                        ......-+...+..+..+.  +.+.+.++.++..++++++.+.|++++++.+. .++.    . ..+.++.....   
T Consensus       227 --~~~g~~~~~~~~~aa~~~~--~l~~l~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  299 (377)
T 3ju7_A          227 --TMMGFNCKMSEYAAAIGIA--TMKKWDDKLKERTRISEWYKQLLQSNGLMKKGWQLQKTEAVIQQFMPILCPEEV---  299 (377)
T ss_dssp             --CSSCCBCCCCHHHHHHHHH--HHHTHHHHHHHHHHHHHHHHHHHHHTTTTTTTCBCCCCSCBCCSSEEEECCTTS---
T ss_pred             --eeccccCCCCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCcceEEEEEEEeCChh---
Confidence              0001111223444444443  34778889999999999999999988754221 1111    1 12334432210   


Q ss_pred             hhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEee--e------EC-------------CEEEEEEEecC
Q 037144          422 KLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHA--I------VG-------------GIYVLRFAAGN  480 (502)
Q Consensus       422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~--~------~~-------------g~~~lR~~~~~  480 (502)
                                               ...++.+.|.++|+..-.+.  .      +.             ....||+.+ +
T Consensus       300 -------------------------~~~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lp~-~  353 (377)
T 3ju7_A          300 -------------------------RNKQVIEDLKKQKIEARLYFSPSCHQQVLFRNYKSTDLTRTNKIAKRIVSLPL-W  353 (377)
T ss_dssp             -------------------------CHHHHHHHHHTTTBCCBCTTSSCGGGSGGGTTSCBSCCHHHHHHHHHEEEECC-C
T ss_pred             -------------------------hHHHHHHHHHHCCCceecccCCccccchhhhcCCCCCCHHHHHHHhCEEECCC-C
Confidence                                     03467788888886422111  0      00             135899997 5


Q ss_pred             CCCcHHHHHHHHHHHHHHHH
Q 037144          481 SMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       481 ~~t~~~di~~~~~~l~~~~~  500 (502)
                      +.++++|++++++.|+++..
T Consensus       354 ~~~t~~di~~v~~~l~~~~~  373 (377)
T 3ju7_A          354 EGMTKEIVEQIVICLGQKVV  373 (377)
T ss_dssp             TTCCHHHHHHHHHHHTC---
T ss_pred             CCCCHHHHHHHHHHHHHHHh
Confidence            67788899999999987654

>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*

Probab=99.86  E-value=4.2e-20  Score=192.18  Aligned_cols=375  Identities=11%  Similarity=0.061  Sum_probs=204.4

Q ss_pred             CCHHHHHHHHHHhhcCCCCC-CCCCcccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCC
Q 037144           54 ESVETILQDVQEHIVPGITH-WQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLP  132 (502)
Q Consensus        54 ~~~~~il~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~  132 (502)
                      ....+-.+.+...- .+..+ .....|+.|..+.+.  ..+.+.+...+......|...+...++++    ++++++|.+
T Consensus        18 ~~~~~~~~~~~~~g-~~~~~~~~~~~ylD~~~~~~~--~~v~~a~~~~l~~~~~~y~~~~~~~~l~~----~la~~~~~~   90 (467)
T 2oqx_A           18 TTRAYREEAIIKSG-MNPFLLDSEDVFIDLLTDSGT--GAVTQSMQAAMMRGDEAYSGSRSYYALAE----SVKNIFGYQ   90 (467)
T ss_dssp             CCHHHHHHHHHHTT-SCGGGSCGGGCSEECSCCSSC--SCCCHHHHHHTTSCCCCSSSCHHHHHHHH----HHHHHHCCS
T ss_pred             ccHHHHHHHHHHcC-CCceeccCCCeeEecccCCCc--HHHHHHHHHHhccCcceeccCchhHHHHH----HHHHHhCcC
Confidence            34555555554421 11111 122357777554433  33344445555443335666666555554    566666653


Q ss_pred             CccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCC-eEEEeCCCCchhH-HHHHHHcCCCCCCEEEE-----
Q 037144          133 KSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISK-LVVYSSDQTHCAF-QKAAQIVGIDRKNIRAI-----  205 (502)
Q Consensus       133 ~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~-~~v~~s~~~H~s~-~~aa~~~Glg~~~v~~v-----  205 (502)
                               .+++|+|||+||..++.+++.......|   .++ +.|+++ ..|+.. .......|.   .++..     
T Consensus        91 ---------~v~~t~~gt~A~~~al~~~~~~~~~~~G---~~~~d~Ii~~-~~h~~t~~~~~~~~~~---~~~~~~~~~~  154 (467)
T 2oqx_A           91 ---------YTIPTHQGRGAEQIYIPVLIKKREQEKG---LDRSKMVAFS-NYFFDTTQGHSQINGC---TVRNVYIKEA  154 (467)
T ss_dssp             ---------EEEEEC--CCSHHHHHHHHHHHHHHHHC---CCTTTCEEEE-SSCCHHHHHHHHHTTC---EEEECBCTTT
T ss_pred             ---------cEEEcCCcHHHHHHHHHHHhccccccCC---CCccceEEec-ccccccchhhhhccCc---ceeecccccc
Confidence                     4899999999999999988753111111   011 445555 577543 333444555   44432     


Q ss_pred             -ecCC--CCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccc-ccc---CChhHHHHHHHHhCCEEEeeccccc-ccc
Q 037144          206 -KTTK--SSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAI-TAV---DPLKPLCDVAKQFGIWVHVDAAYAG-SAC  277 (502)
Q Consensus       206 -~~~~--~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~-G~i---dpl~eI~~i~~~~g~~lhVDaA~g~-~~~  277 (502)
                       +.+.  ..++.+|+++|+++|++..  ...+.+|+++.+++++ |.+   +++++|+++|++||+|||+|++++. ..+
T Consensus       155 ~~~~~~~~~~~~~d~~~Le~~i~~~~--~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~  232 (467)
T 2oqx_A          155 FDTGVRYDFKGNFDLEGLERGIEEVG--PNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAY  232 (467)
T ss_dssp             TCTTSCCTTTTCBCHHHHHHHHHHHC--GGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHH
T ss_pred             ccCCCCCCccCCcCHHHHHHHHHhcC--CCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhh
Confidence             1210  0246899999999998631  0123478888888887 665   5689999999999999999988755 221


Q ss_pred             --------cCc-cchhhh-cCCCCCCeeEEccCCcCCCCCcceEEEeeCc---hhhhhhhcCCcccc-cCccCCCCCccc
Q 037144          278 --------ICP-EFRHFI-DGVECVDSFSFNPHKWLFTTLDCCCLWVKDP---SCLLSTLSTNPQYL-KNEATDQEPKEQ  343 (502)
Q Consensus       278 --------~~~-~~~~~~-~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~---~~l~~~~~~~~~yl-~~~~~~~~~~~~  343 (502)
                              ... ...... .....+|++++++||+++.|.| |+++.++.   ..+.. +   ..+. .....       
T Consensus       233 ~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~s~sK~~g~~~G-g~~~~~~~~~~~~~~~-~---~~~~~~~~~~-------  300 (467)
T 2oqx_A          233 FIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDAMVPMG-GLLCMKDDSFFDVYTE-C---RTLCVVQEGF-------  300 (467)
T ss_dssp             HHHHHCGGGTTSCHHHHHHHHGGGCSEEEEESSSTTCCSSC-EEEEECSGGGHHHHHH-H---HHHHHHTTSS-------
T ss_pred             hcccccccccCccHHHHhhhhhccCCeEEEecccccCCCCc-eEEEecChhHHHHHHH-H---HHhhhccCCc-------
Confidence                    111 111110 0013588899999999987744 55555544   12211 1   1111 00000       


Q ss_pred             ccCCCcccccCCCCCCchHHHHHHHHhcHHHH-HHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeec--Ccch
Q 037144          344 EVGYKDWQITLCRRFRSLKLWVVIRNFGVANL-RNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTP--SAVM  420 (502)
Q Consensus       344 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~-~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~--~~~~  420 (502)
                              .+.+.. .+.. ..++...-.+.+ .+.+++..++++++.+.|+++ ++++. +....++.+.+..  .+. 
T Consensus       301 --------~~~~~~-~~~~-~~al~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~~~~~~~~~~-  367 (467)
T 2oqx_A          301 --------PTYGGL-EGGA-MERLAVGLYDGMNLDWLAYRIAQVQYLVDGLEEI-GVVCQ-QAGGHAAFVDAGKLLPHI-  367 (467)
T ss_dssp             --------CCCCCC-CHHH-HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHT-TCCEE-EECSSCEEEEHHHHSTTS-
T ss_pred             --------ccccch-hhhH-HHHHHHhhHhhhhHHHHHHHHHHHHHHHHHHHHC-CCeee-cCCceEEEEechhhcccC-
Confidence                    000000 1111 112221001122 235566678899999999888 78777 5445556665531  110 


Q ss_pred             hhhhhcccCCCcccccccchhHhhHHH-HHHHHHHH-HhcCcEEEEeeeE--C-----------CEEEEEEEecCCCCcH
Q 037144          421 DKLRTKYKNGTYDQYRQFSEEERTNEF-NRELLESI-NVSGKVFMTHAIV--G-----------GIYVLRFAAGNSMTME  485 (502)
Q Consensus       421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~l-~~~g~~~~~~~~~--~-----------g~~~lR~~~~~~~t~~  485 (502)
                                         +.   .++ ..++.++| .+.|..+.+...+  .           +..++|+++....+++
T Consensus       368 -------------------~~---~~~~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~~t~  425 (467)
T 2oqx_A          368 -------------------PA---DQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQ  425 (467)
T ss_dssp             -------------------CG---GGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECCCTTTSCH
T ss_pred             -------------------Cc---ccccHHHHHHHHHHhcCceecccccccccccccccccccCccCeEEEEecCCCCCH
Confidence                               00   111 34567777 6678654432211  0           2368999986332678


Q ss_pred             HHHHHHHHHHHHHHH
Q 037144          486 SHVRAAWTVVQEHLE  500 (502)
Q Consensus       486 ~di~~~~~~l~~~~~  500 (502)
                      ++|+++++.|+++.+
T Consensus       426 e~i~~~~~~l~~~l~  440 (467)
T 2oqx_A          426 THMDFIIEAFKHVKE  440 (467)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHh
Confidence            899999999998765

>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}

Probab=99.85  E-value=1.3e-20  Score=193.36  Aligned_cols=244  Identities=14%  Similarity=0.097  Sum_probs=169.0

Q ss_pred             cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144          110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ  189 (502)
Q Consensus       110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~  189 (502)
                      ..|...++|    +++++++|.+.         ++++++|++|+..++.+...           +++.|+++...|.+..
T Consensus        80 ~~p~~~~le----~~lA~l~g~~~---------~v~~~sG~~Ai~~al~al~~-----------~Gd~Vi~~~~~y~~~~  135 (430)
T 3ri6_A           80 SNPTVEDLE----QRLKNLTGALG---------VLALGSGMAAISTAILTLAR-----------AGDSVVTTDRLFGHTL  135 (430)
T ss_dssp             CCHHHHHHH----HHHHHHHTCSE---------EEEESCHHHHHHHHHHHHCC-----------TTCEEEEETTCCHHHH
T ss_pred             CCHHHHHHH----HHHHHHHCCCc---------EEEECCHHHHHHHHHHHHhC-----------CCCEEEEcCCCchhHH
Confidence            345555555    55777888653         57778889998877766533           6788899999998777


Q ss_pred             H----HHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144          190 K----AAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW  265 (502)
Q Consensus       190 ~----aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~  265 (502)
                      .    .+...|+   +++.++.+       |+++|+++|+++      +.+|+++.++|++|.+.|+++|+++|+++|++
T Consensus       136 ~~~~~~~~~~G~---~~~~v~~~-------d~~~l~~ai~~~------t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~  199 (430)
T 3ri6_A          136 SLFQKTLPSFGI---EVRFVDVM-------DSLAVEHACDET------TKLLFLETISNPQLQVADLEALSKVVHAKGIP  199 (430)
T ss_dssp             HHHHTHHHHTTC---EEEEECTT-------CHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHTTTCC
T ss_pred             HHHHHHHHHcCC---EEEEeCCC-------CHHHHHHhhCCC------CeEEEEECCCCCCCeecCHHHHHHHHHHcCCE
Confidence            6    6678899   89988864       899999998654      34888999999999999999999999999999


Q ss_pred             EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC--cceEEEeeCchhhh---------hhhcCCcccccCc
Q 037144          266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL--DCCCLWVKDPSCLL---------STLSTNPQYLKNE  334 (502)
Q Consensus       266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~--~~g~~~~r~~~~l~---------~~~~~~~~yl~~~  334 (502)
                      +++|++|+.+.+..+.  ..     ++|+++.+++|++++|.  .+|+++.+....+.         +.+. ...|+...
T Consensus       200 livD~a~~~~~~~~~~--~~-----g~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g-~~~~i~~~  271 (430)
T 3ri6_A          200 LVVDTTMTPPYLLEAK--RL-----GVDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAG-PMAFLYKA  271 (430)
T ss_dssp             EEEECTTSCTTTCCGG--GG-----TCSEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHG-GGHHHHHH
T ss_pred             EEEECCCcccccCChH--Hc-----CCEEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhc-hhhHHHHH
Confidence            9999999876553221  11     68999999999998762  34555544332110         0000 00011000


Q ss_pred             cCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCC--------
Q 037144          335 ATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRN--------  406 (502)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~--------  406 (502)
                      .            ..+....+....++..|..++  |.+.+..++++..++++++.+.|++.|+++.+..|.        
T Consensus       272 ~------------~~~~~~~g~~~~~~~a~l~l~--~l~~l~~r~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~  337 (430)
T 3ri6_A          272 R------------KEVFQNLGPSLSPHNAYLQSL--GLETMALRIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYA  337 (430)
T ss_dssp             H------------HTHHHHHCCCCCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHH
T ss_pred             H------------HHHHHhcCCCCCHHHHHHHHh--hhhhHHHHHHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHH
Confidence            0            000001122234556666665  567788899999999999999999999988654333        


Q ss_pred             --------ee-EEEEEee
Q 037144          407 --------FS-LVCFRVT  415 (502)
Q Consensus       407 --------~~-~v~f~~~  415 (502)
                              .+ +++|.+.
T Consensus       338 ~~~~~~g~Gg~~lsf~l~  355 (430)
T 3ri6_A          338 IAKRQFRYAGSILTFELE  355 (430)
T ss_dssp             HHHHHCSSCCSEEEEECS
T ss_pred             HHHHhCCCCceEEEEEEC
Confidence                    34 8888875

>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*

Probab=99.85  E-value=1.1e-20  Score=194.05  Aligned_cols=326  Identities=11%  Similarity=0.020  Sum_probs=204.8

Q ss_pred             HHHHHHHHhhcCC-CCcccccChhhHHHHHHHHHHHHHhcCC---CCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHH
Q 037144           91 GIVGEMLSSGFNV-VGLDWISSPAAVELENIVMDWLGQMLDL---PKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLK  166 (502)
Q Consensus        91 ~~~~~~l~~~~n~-~~~~~~~~p~~~~le~~~~~~l~~l~g~---~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~  166 (502)
                      ..+.+.+...+.. ....|....+..++.+.+.+++....+.   ++..      ..++|+||++|+..++......  .
T Consensus        70 ~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~------~i~~t~G~t~al~~~~~~~~~~--~  141 (420)
T 4f4e_A           70 RAVRDAEKARVEAGLPRGYLPIDGIAAYDASVQKLLLGDDSPLIAAGRV------VTAQALGGTGALKIGADFLRTL--N  141 (420)
T ss_dssp             HHHHHHHHHHHHTCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCE------EEEEEEHHHHHHHHHHHHHHHH--C
T ss_pred             HHHHHHHHHHhccCCCCCCCCCCCcHHHHHHHHHHhcCCCccccccCce------EEEECCccHHHHHHHHHHHHHh--C
Confidence            4455555554433 3345666667788998988888766552   2210      4799999999998775432111  1


Q ss_pred             HhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccc
Q 037144          167 KIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAI  246 (502)
Q Consensus       167 ~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~  246 (502)
                             +++.|+++..+|.++...++..|.   +++.+|+..++++.+|+++|++++++.   .....+|+.+.++|+|
T Consensus       142 -------~gd~Vlv~~p~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~~~v~i~~p~NPt  208 (420)
T 4f4e_A          142 -------PKAKVAISDPSWENHRALFDMAGF---EVVAYPYYDAKTNGVNFDGMLAALNGY---EPGTIVVLHACCHNPT  208 (420)
T ss_dssp             -------TTCCEEEEESCCHHHHHHHHHTTC---CEEEEECEETTTTEECHHHHHHHHTTC---CTTCEEEEECSSCTTT
T ss_pred             -------CCCEEEEeCCCcHhHHHHHHHcCC---eEEEeeeeccccCccCHHHHHHHHHhC---CCCCEEEEeCCCCCCC
Confidence                   567788899999999999999999   999999832235799999999999632   1224578888999999


Q ss_pred             ccc---CChhHHHHHHHHhCCEEEeecccccccccCc-cchhh--hcCCCCCCeeEEccCCcCCC-CCcceEEEe--eCc
Q 037144          247 TAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICP-EFRHF--IDGVECVDSFSFNPHKWLFT-TLDCCCLWV--KDP  317 (502)
Q Consensus       247 G~i---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~-~~~~~--~~~~~~aDsi~~~~hK~l~~-p~~~g~~~~--r~~  317 (502)
                      |.+   +++++|+++|++||+++++|.+|+++....+ .....  +.+....+.++.+++|.++. ...+|++++  .++
T Consensus       209 G~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~~~~~~  288 (420)
T 4f4e_A          209 GVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAAANLNVFVSSSFSKSFSLYGERVGALSIITDSK  288 (420)
T ss_dssp             CCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGGGCEEEEEEECSSH
T ss_pred             CCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHhcCCCEEEEEeCCccCcCcCCCcEEEEEEcCCH
Confidence            998   5577999999999999999999977665321 11111  11223455777889999984 455788764  333


Q ss_pred             hhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc--------HHHHHHHHHHHHHHHHHH
Q 037144          318 SCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG--------VANLRNFIRSHVGMAKLF  389 (502)
Q Consensus       318 ~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g--------~~g~~~~~~~~~~la~~l  389 (502)
                      ............+.....                 .+   ...+..+++...+.        .+.++++.+++.++++++
T Consensus       289 ~~~~~~~~~~~~~~~~~~-----------------~~---~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l  348 (420)
T 4f4e_A          289 DEAARVLSQLKRVIRTNY-----------------SN---PPTHGGAIVAAVLASPELRASWVQELGEMRDRIRAMRNGL  348 (420)
T ss_dssp             HHHHHHHHHHHHHHHTTT-----------------SS---CCSHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhccc-----------------CC---CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            322211110000000000                 00   01222222222221        345678888899999999


Q ss_pred             HHHHhcC---CCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEee
Q 037144          390 ERLVTSD---KRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHA  466 (502)
Q Consensus       390 ~~~l~~~---~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~  466 (502)
                      .+.|+++   +++++. .+..++++|.-.+                            .   ..+.+.+.+.|.. +.+.
T Consensus       349 ~~~L~~~~~~~~~~~~-~~~~g~~~~~~~~----------------------------~---~~~~~~l~~~gI~-v~~~  395 (420)
T 4f4e_A          349 VERLKAAGIERDFSFI-NAQRGMFSYSGLT----------------------------S---AQVDRLREEFGIY-AVST  395 (420)
T ss_dssp             HHHHHHTTCSSCCTHH-HHSCSSEEECCCC----------------------------H---HHHHHHHHHHCEE-CCTT
T ss_pred             HHHHHhcCCCCCceeE-CCCccEEEEeCCC----------------------------H---HHHHHHHHhCCEE-ecCC
Confidence            9999887   366554 3444555542111                            1   2334444455754 3331


Q ss_pred             eECCEEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144          467 IVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHL  499 (502)
Q Consensus       467 ~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~  499 (502)
                             .|++++. .+ +++|++++++|+++.
T Consensus       396 -------~Ris~~~-~~-~~~i~~~~~~l~~~l  419 (420)
T 4f4e_A          396 -------GRICVAA-LN-TRNLDVVANAIAAVL  419 (420)
T ss_dssp             -------SEEEGGG-CC-TTTHHHHHHHHHHHH
T ss_pred             -------CeEEEec-CC-HHHHHHHHHHHHHHh
Confidence                   2999863 24 447999999998875

>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*

Probab=99.85  E-value=4.9e-20  Score=187.39  Aligned_cols=289  Identities=10%  Similarity=0.020  Sum_probs=181.5

Q ss_pred             HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144          116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV  195 (502)
Q Consensus       116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~  195 (502)
                      ....++.+++++++|.+.+       .+++|+||++|+..++.+++... +       ++.+|+.+...|.+...++...
T Consensus        87 ~~~~~l~~~la~~~~~~~~-------~v~~~~gg~~a~~~al~~~~~~~-~-------~~~vi~~~~~y~~~~~~~~~~~  151 (395)
T 1vef_A           87 PMRGEFYRTLTAILPPELN-------RVFPVNSGTEANEAALKFARAHT-G-------RKKFVAAMRGFSGRTMGSLSVT  151 (395)
T ss_dssp             HHHHHHHHHHHHTSCTTEE-------EEEEESSHHHHHHHHHHHHHHHH-S-------CCEEEEETTCCCCSSHHHHHTC
T ss_pred             HHHHHHHHHHHHhcCCCcC-------EEEEcCcHHHHHHHHHHHHHHHh-C-------CCeEEEEcCCcCCCchhhhhhc
Confidence            4556677888899886543       58999999999999888765311 0       3344544444556666676766


Q ss_pred             CCCCCC------------EEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHHH
Q 037144          196 GIDRKN------------IRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDVA  259 (502)
Q Consensus       196 Glg~~~------------v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~  259 (502)
                      |.   .            +..++       ..|+++|+++|+++      +.+|+++..++++|.+.|    +++|+++|
T Consensus       152 g~---~~~~~~~~p~~~~~~~~~-------~~d~~~l~~~i~~~------~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~  215 (395)
T 1vef_A          152 WE---PKYREPFLPLVEPVEFIP-------YNDVEALKRAVDEE------TAAVILEPVQGEGGVRPATPEFLRAAREIT  215 (395)
T ss_dssp             CC---HHHHGGGCSCSSCEEEEC-------TTCHHHHHHHCCTT------EEEEEECSEETTTTSEECCHHHHHHHHHHH
T ss_pred             CC---cccccccCCCCCCeeEeC-------CCcHHHHHHHhccC------EEEEEEeCccCCCCccCCCHHHHHHHHHHH
Confidence            65   3            33333       24899999988642      347777777778998877    99999999


Q ss_pred             HHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCC
Q 037144          260 KQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQE  339 (502)
Q Consensus       260 ~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~  339 (502)
                      ++||+++|+|++|+++............++ .+|+++  +||+++.+.++|++++++. . .+.+... .+..       
T Consensus       216 ~~~~~~li~Dea~~~~~~~g~~~~~~~~~~-~~d~~s--~sK~~~~g~~~G~~~~~~~-~-~~~l~~~-~~~~-------  282 (395)
T 1vef_A          216 QEKGALLILDEIQTGMGRTGKRFAFEHFGI-VPDILT--LAKALGGGVPLGVAVMREE-V-ARSMPKG-GHGT-------  282 (395)
T ss_dssp             HHHTCEEEEECTTTTTTTTSSSSTHHHHTC-CCSEEE--ECGGGGTTSSCEEEEEEHH-H-HHTSCTT-SSCC-------
T ss_pred             HHcCCEEEEEecccCCccCCchhHhhhcCC-CCCEEE--EcccccCCCceEEEEehHH-H-HhhhccC-CcCC-------
Confidence            999999999999985322111111011122 468774  5999988888999998754 2 2222110 0000       


Q ss_pred             CcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC--eEEecCCCeeEEEEEeecC
Q 037144          340 PKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKR--FEVAFPRNFSLVCFRVTPS  417 (502)
Q Consensus       340 ~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~--~~l~~~~~~~~v~f~~~~~  417 (502)
                                 +. .........+..+++.+..   .++.++..++++++.+.|++++.  +... ++..+++++.+...
T Consensus       283 -----------~~-~~~~~~~~a~~~al~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~g~~~~~~~~~~  346 (395)
T 1vef_A          283 -----------TF-GGNPLAMAAGVAAIRYLER---TRLWERAAELGPWFMEKLRAIPSPKIREV-RGMGLMVGLELKEK  346 (395)
T ss_dssp             -----------SS-TTCHHHHHHHHHHHHHHHH---HTTHHHHHHHHHHHHHHHHTSCCTTEEEE-EEETTEEEEEESSC
T ss_pred             -----------Cc-CCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHhhcCceEEE-EEEEEEEEEEEcCh
Confidence                       00 0001112233344444322   34677888899999999988742  1111 22335666665421


Q ss_pred             cchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHH
Q 037144          418 AVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQ  496 (502)
Q Consensus       418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~  496 (502)
                                                    ..++.+.|. +.|..+. +   .+..++|++++ ..+++++++++++.|+
T Consensus       347 ------------------------------~~~l~~~l~~~~gi~v~-~---~~~~~iRi~~~-~~~~~~~i~~~~~~l~  391 (395)
T 1vef_A          347 ------------------------------AAPYIARLEKEHRVLAL-Q---AGPTVIRFLPP-LVIEKEDLERVVEAVR  391 (395)
T ss_dssp             ------------------------------SHHHHHHHHHHHCEECE-E---SSTTEEEECCC-TTCCHHHHHHHHHHHH
T ss_pred             ------------------------------HHHHHHHHHHHCCeEEe-c---CCCCEEEEeCC-CCCCHHHHHHHHHHHH
Confidence                                          134566666 6686443 3   23568999974 5577889999999998


Q ss_pred             HHH
Q 037144          497 EHL  499 (502)
Q Consensus       497 ~~~  499 (502)
                      ++.
T Consensus       392 ~~l  394 (395)
T 1vef_A          392 AVL  394 (395)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            865

>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}

Probab=99.85  E-value=4e-20  Score=191.10  Aligned_cols=317  Identities=10%  Similarity=0.075  Sum_probs=191.7

Q ss_pred             ccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCe----------
Q 037144          107 DWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKL----------  176 (502)
Q Consensus       107 ~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~----------  176 (502)
                      .|....+..++++++.+|+.+.+|.+...     ...++|+||++|+..++.+...           +++          
T Consensus        78 ~y~~~~g~~~lr~~ia~~l~~~~g~~~~~-----~~i~~t~G~t~al~~~~~~l~~-----------~gd~~~~~~~~~~  141 (444)
T 3if2_A           78 NYSNPQGDSAFIDALVGFFNRHYDWNLTS-----ENIALTNGSQNAFFYLFNLFGG-----------AFVNEHSQDKESK  141 (444)
T ss_dssp             SCCCTTCCHHHHHHHHHHHHHHHCCCCCG-----GGEEEESSHHHHHHHHHHHSSE-----------EEECC-------C
T ss_pred             ccCCCCCCHHHHHHHHHHHHhhcCCCCCH-----HHEEEecCcHHHHHHHHHHHhC-----------CCccccccccccc
Confidence            45555667899999999999988864321     2689999999999887776532           232          


Q ss_pred             ----EEEeC-CCCchhHHHHH------HHcCCCCCCEEEEecCCC-C--CcccCHHHHHHHHHHHHhcCCccEEEEEecC
Q 037144          177 ----VVYSS-DQTHCAFQKAA------QIVGIDRKNIRAIKTTKS-S--SYGLSAESVLSQINLDVEAELIPLFLCATVG  242 (502)
Q Consensus       177 ----~v~~s-~~~H~s~~~aa------~~~Glg~~~v~~v~~~~~-~--~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~g  242 (502)
                          .|+++ ...|..+..++      ...|.   .++.++++.+ +  ++.+|+++|++++....   ..+.+|+++.+
T Consensus       142 g~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~---~~~~~v~i~~p  215 (444)
T 3if2_A          142 SVDKSILLPLTPEYIGYSDVHVEGQHFAAVLP---HIDEVTHDGEEGFFKYRVDFEALENLPALKE---GRIGAICCSRP  215 (444)
T ss_dssp             EEEEEEEESSSSCCGGGTTCCSSSCCEEECCC---EEEEEEETTEEEEEEEECCHHHHHTCHHHHT---TCEEEEEEESS
T ss_pred             cccceEEEeCCCCccchhhcccccchhhccCc---eEEecccccccCccccCCCHHHHHHHHHhcC---CCceEEEeCCC
Confidence                45554 66666655432      22355   7777887641 1  25799999999864321   12457888889


Q ss_pred             CccccccCC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchh
Q 037144          243 TTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSC  319 (502)
Q Consensus       243 tt~~G~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~  319 (502)
                      +|++|.+-|   +++|+++|++||+++|+|++|+.+.... .+..........+.++.++||++..+.++|+++.. +..
T Consensus       216 ~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~-~~l  293 (444)
T 3if2_A          216 TNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNI-IYSDAHLNWDNNTILCFSLSKIGLPGMRTGIIVAD-AKV  293 (444)
T ss_dssp             CTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCC-BCSCCCCCCCTTEEEEEESTTTTCGGGCCEEEECC-HHH
T ss_pred             CCCCCCcCCHHHHHHHHHHHHHCCCEEEEECCCCCccccc-ccccccccCCCCEEEEechhhccCCCCceEEEEEC-HHH
Confidence            999999988   8899999999999999999997532111 11111111235678889999986555667876653 332


Q ss_pred             hhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcH----HHHHH-HHHHHHHHHHHHHHHHh
Q 037144          320 LLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGV----ANLRN-FIRSHVGMAKLFERLVT  394 (502)
Q Consensus       320 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~----~g~~~-~~~~~~~la~~l~~~l~  394 (502)
                      . ..+........                       .....+...++...+..    ....+ +.+++.++++++.+.|.
T Consensus       294 ~-~~~~~~~~~~~-----------------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  349 (444)
T 3if2_A          294 I-EAVSAMNAVVN-----------------------LAPTRFGAAIATPLVANDRIKQLSDNEIKPFYQKQATLAVKLLK  349 (444)
T ss_dssp             H-HHHHHHHHHHH-----------------------SSCCCHHHHHHHHHHHTSHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred             H-HHHHHHHHhcc-----------------------CCCChHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            2 22211000000                       00122333333322211    11222 44455666667777665


Q ss_pred             c-CC--CeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC--
Q 037144          395 S-DK--RFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG--  469 (502)
Q Consensus       395 ~-~~--~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--  469 (502)
                      + ++  ++++..+....++++.+.....                           ...++.+.+.+.|..+.++..+.  
T Consensus       350 ~~l~~~~~~~~~~~~g~~~~~~~~~~~~---------------------------~~~~l~~~l~~~gi~v~~g~~~~~~  402 (444)
T 3if2_A          350 QALGDYPLMIHKPEGAIFLWLWFKDLPI---------------------------STLDLYERLKAKGTLIVPSEYFFPG  402 (444)
T ss_dssp             HHSSSSSEEEECCCBSSEEEEEETTCSS---------------------------CHHHHHHHHHHTTEECEEGGGSCTT
T ss_pred             HhcccCCceEecCCccEEEEEEcCCCCC---------------------------CHHHHHHHHHHCCeEEecchhhcCC
Confidence            4 44  4666544434445555542111                           02356667777786544433221  


Q ss_pred             --------CEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          470 --------GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       470 --------g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                              +..++|++++.   ++++|+++++.|.++.++
T Consensus       403 ~~~~~~~~~~~~iRis~~~---~~e~i~~~l~~l~~~~~~  439 (444)
T 3if2_A          403 VDVSDYQHAHECIRMSIAA---DEQTLIDGIKVIGEVVRE  439 (444)
T ss_dssp             CCCTTCSGGGSEEEEESSS---CHHHHHHHHHHHHHHHHH
T ss_pred             CCCcccccCCCeEEEEEeC---CHHHHHHHHHHHHHHHHH
Confidence                    12589999863   778999999999987654

>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*

Probab=99.85  E-value=1.9e-20  Score=192.92  Aligned_cols=308  Identities=14%  Similarity=0.059  Sum_probs=199.2

Q ss_pred             cccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCc
Q 037144          106 LDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTH  185 (502)
Q Consensus       106 ~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H  185 (502)
                      ..|....+..++++++.+|+.+.++.+.+       ..++|+|+++++.. +.....           +++.|+++...|
T Consensus        92 ~~y~~~~g~~~l~~~ia~~~~~~~~~~~~-------~i~~t~G~~~al~~-l~~l~~-----------~gd~Vl~~~p~y  152 (432)
T 3ei9_A           92 SGYGAEQGAKPLRAAIAKTFYGGLGIGDD-------DVFVSDGAKCDISR-LQVMFG-----------SNVTIAVQDPSY  152 (432)
T ss_dssp             CCCCCTTCCHHHHHHHHHHHHTTTTCCGG-------GEEEESCHHHHHHH-HHHHHC-----------TTCCEEEEESCC
T ss_pred             cCCCCCCCCHHHHHHHHHHHHccCCCCcc-------eEEECCChHHHHHH-HHHHcC-----------CCCEEEEeCCCC
Confidence            34555556789999999999875666544       68999999988754 332221           577888899999


Q ss_pred             hhHHHHHHHcCCCC---------CCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC---Chh
Q 037144          186 CAFQKAAQIVGIDR---------KNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD---PLK  253 (502)
Q Consensus       186 ~s~~~aa~~~Glg~---------~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id---pl~  253 (502)
                      .++..+++..|...         .+++.+|++.++++..|++.           ...+.+|+++.++|++|.+-   +++
T Consensus       153 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----------~~~~~~v~l~~p~NPtG~~~~~~~l~  221 (432)
T 3ei9_A          153 PAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLST-----------VGRTDIIFFCSPNNPTGAAATREQLT  221 (432)
T ss_dssp             THHHHHHHHHTCSCCEETTTTEETTCEEEECCGGGTTSCCGGG-----------CCCCSEEEEESSCTTTCCCCCHHHHH
T ss_pred             HHHHHHHHHcCCcccccccccccCceEEeccCcccCCcCChhh-----------CCCCCEEEEeCCCCCCCCCCCHHHHH
Confidence            99999999888421         26889998754334445332           01234677789999999985   477


Q ss_pred             HHHHHHHHhCCEEEeecccccccccCccchhh--hcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchh------hhhhh
Q 037144          254 PLCDVAKQFGIWVHVDAAYAGSACICPEFRHF--IDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSC------LLSTL  324 (502)
Q Consensus       254 eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~------l~~~~  324 (502)
                      +|+++|++||+++++|.+|+.+.... .....  +.+....+.+..+++|+++ .+..+|++++++...      +...+
T Consensus       222 ~l~~la~~~~~~li~Dea~~~~~~~~-~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~  300 (432)
T 3ei9_A          222 QLVEFAKKNGSIIVYDSAYAMYMSDD-NPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTVIPKKLLYSDGFPVAKDF  300 (432)
T ss_dssp             HHHHHHHHHTCEEEEECTTGGGCCSS-CCSSGGGSTTGGGTEEEEEESHHHHCTTTTCCEEEECCTTCBCTTSCBHHHHH
T ss_pred             HHHHHHHHcCcEEEEccchHhhccCC-CCCChhhcCCCCCeEEEEecchhccCCcccceEEEEEChHHhhcchHHHHHHH
Confidence            77888999999999999998764431 11111  1122345678889999997 556688888765431      01111


Q ss_pred             cCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 037144          325 STNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF---GVANLRNFIRSHVGMAKLFERLVTSDKRFEV  401 (502)
Q Consensus       325 ~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l  401 (502)
                      .....+...                       ....+...+++..+   +.+.+.++.++..++++++.+.|+++ ++++
T Consensus       301 ~~~~~~~~~-----------------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~  356 (432)
T 3ei9_A          301 NRIICTCFN-----------------------GASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSL-GYDV  356 (432)
T ss_dssp             HHHHHHSCC-----------------------CSCHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCE
T ss_pred             HHHhccccC-----------------------CCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHC-Ccee
Confidence            100000000                       01234444444444   34567888899999999999999988 8888


Q ss_pred             ecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcEEEEeeeE--CCEEEEEEEe
Q 037144          402 AFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKVFMTHAIV--GGIYVLRFAA  478 (502)
Q Consensus       402 ~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~--~g~~~lR~~~  478 (502)
                      ..+....++.+.+....                             ..++.+++.++ |..+.++..+  .+..++|+++
T Consensus       357 ~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~ll~~~gv~v~~g~~f~~~~~~~iRis~  407 (432)
T 3ei9_A          357 YGGKNAPYVWVHFPNQS-----------------------------SWDVFAEILEKTHVVTTPGSGFGPGGEGFVRVSA  407 (432)
T ss_dssp             EECSSSSEEEEECTTSC-----------------------------HHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEEC
T ss_pred             cCCCcceEEEEECCCCC-----------------------------HHHHHHHHHHHCCEEEeCchHhCCCCCCEEEEEe
Confidence            75445556666554211                             23455555554 7654443332  2357999997


Q ss_pred             cCCCCcHHHHHHHHHHHHHHHH
Q 037144          479 GNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       479 ~~~~t~~~di~~~~~~l~~~~~  500 (502)
                      .   +++++|+++++.|++.-+
T Consensus       408 ~---~~~e~l~~~l~rl~~~~~  426 (432)
T 3ei9_A          408 F---GHRENILEACRRFKQLYK  426 (432)
T ss_dssp             C---SCHHHHHHHHHHHHHHHT
T ss_pred             c---CCHHHHHHHHHHHHHHhh
Confidence            4   478899999999987543

>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3

Probab=99.85  E-value=1.1e-19  Score=186.63  Aligned_cols=253  Identities=12%  Similarity=0.093  Sum_probs=164.6

Q ss_pred             HHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHH----HH
Q 037144          119 NIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAA----QI  194 (502)
Q Consensus       119 ~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa----~~  194 (502)
                      .++.+.+++++|.+.         .+++++|++|+..++.+...           +++.|+++...|.+....+    +.
T Consensus        61 ~~l~~~la~~~g~~~---------~v~~~sGt~A~~~~l~~~~~-----------~gd~vi~~~~~~~~~~~~~~~~~~~  120 (421)
T 2ctz_A           61 DVLEKRLAALEGGKA---------ALATASGHAAQFLALTTLAQ-----------AGDNIVSTPNLYGGTFNQFKVTLKR  120 (421)
T ss_dssp             HHHHHHHHHHHTCSE---------EEEESSHHHHHHHHHHHHCC-----------TTCEEEECSCCCHHHHHHHHTHHHH
T ss_pred             HHHHHHHHHHhCCCc---------eEEecCHHHHHHHHHHHHhC-----------CCCEEEEeCCCchHHHHHHHHHHHH
Confidence            344455777777652         46677779999888776532           5778999999999877765    67


Q ss_pred             cCCCCCCEEEE-ecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccc-
Q 037144          195 VGIDRKNIRAI-KTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAY-  272 (502)
Q Consensus       195 ~Glg~~~v~~v-~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~-  272 (502)
                      .|+   +++.+ +.+       |+++|+++|+++      +.+|+++.++|++|.+.|+++|+++|++||+++|+|++| 
T Consensus       121 ~g~---~~~~~~~~~-------d~~~l~~~i~~~------~~~v~~~~~~n~~G~~~~l~~i~~~a~~~g~~livD~~~~  184 (421)
T 2ctz_A          121 LGI---EVRFTSREE-------RPEEFLALTDEK------TRAWWVESIGNPALNIPDLEALAQAAREKGVALIVDNTFG  184 (421)
T ss_dssp             TTC---EEEECCTTC-------CHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGG
T ss_pred             cCC---EEEEECCCC-------CHHHHHHhhccC------CeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcc
Confidence            888   88888 642       889999998653      347888999999999999999999999999999999999 


Q ss_pred             ccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc-ceEEEeeC-c-hh----hhhhhcCCcccccCccCCCCCccccc
Q 037144          273 AGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD-CCCLWVKD-P-SC----LLSTLSTNPQYLKNEATDQEPKEQEV  345 (502)
Q Consensus       273 g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~-~g~~~~r~-~-~~----l~~~~~~~~~yl~~~~~~~~~~~~~~  345 (502)
                      +.+.. .....      .++|++++++||+++.|.+ .|++++.+ . ..    +.........|...............
T Consensus       185 ~~g~~-~~~~~------~~~Di~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~  257 (421)
T 2ctz_A          185 MGGYL-LRPLA------WGAALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFGELAFI  257 (421)
T ss_dssp             GGGTS-CCGGG------GTCSEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHGGGHHH
T ss_pred             ccccc-CCccc------cCCeEEEECCcccccCCCCcEEEEEEeccchhhcccchhhhccccchhhhhhhhhhcchhHHH
Confidence            65532 21111      1689999999999998763 67777753 2 11    11111111111100000000000000


Q ss_pred             CCCcc--cccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec-C-----------------C
Q 037144          346 GYKDW--QITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAF-P-----------------R  405 (502)
Q Consensus       346 ~~~~~--~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~-~-----------------~  405 (502)
                      ....+  ....+....++..|+.++.  .+.+..++++..++++++.+.|+++|+++.+. +                 .
T Consensus       258 ~~~r~~~~~~~g~~~~~~~a~~~~~~--l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~~~~~~~~~~~~~~~~~~  335 (421)
T 2ctz_A          258 VKARVDGLRDQGQALGPFEAWVVLLG--METLSLRAERHVENTLHLAHWLLEQPQVAWVNYPGLPHHPHHDRAQKYFKGK  335 (421)
T ss_dssp             HHHHHTHHHHHCCCCCHHHHHHHHHH--HTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTCTTHHHHHHHHTTC
T ss_pred             HHHHHHHHHhcCCCCCHHHHHHHHcC--cchHHHHHHHHHHhHHHHHHHHHhCCCeeEEECCCCCCCCCHHHHHHhccCC
Confidence            00000  0001223345555665543  45566778888899999999999999999863 2                 2


Q ss_pred             CeeEEEEEeec
Q 037144          406 NFSLVCFRVTP  416 (502)
Q Consensus       406 ~~~~v~f~~~~  416 (502)
                      ..++++|.+.+
T Consensus       336 ~g~ivsf~l~~  346 (421)
T 2ctz_A          336 PGAVLTFGLKG  346 (421)
T ss_dssp             CCSEEEEEETT
T ss_pred             CceEEEEEeCC
Confidence            35688888753

>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3

Probab=99.85  E-value=2.6e-20  Score=184.75  Aligned_cols=157  Identities=11%  Similarity=0.067  Sum_probs=121.3

Q ss_pred             HHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHH----HHc
Q 037144          120 IVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAA----QIV  195 (502)
Q Consensus       120 ~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa----~~~  195 (502)
                      ++.+.+++++|.+.         .+++++||+|+..++.+...           +++.|+++...|.+....+    +..
T Consensus         2 ~l~~~la~~~g~~~---------~i~~~sG~~a~~~~~~~~~~-----------~g~~v~~~~~~~~~~~~~~~~~~~~~   61 (331)
T 1pff_A            2 ALEGKIAKLEHAEA---------CAATASGMGAIAASVWTFLK-----------AGDHLISDDCLYGCTHALFEHQLRKF   61 (331)
T ss_dssp             HHHHHHHHHHTCSE---------EEEESSHHHHHHHHHHHHCC-----------TTCEEEEESCCCHHHHHHHHTHHHHT
T ss_pred             hHHHHHHHHhCCCe---------EEEeCChHHHHHHHHHHhcC-----------CCCEEEEcCCCcchHHHHHHHHHHhc
Confidence            34566888888762         46666679998877765532           5677888999998877664    457


Q ss_pred             CCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHH-hCCEEEeeccccc
Q 037144          196 GIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQ-FGIWVHVDAAYAG  274 (502)
Q Consensus       196 Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~-~g~~lhVDaA~g~  274 (502)
                      |+   +++.+|.       +|+++|+++++++      +.+|+++.++|++|.+.|+++|.++|++ +|+++++|++|+.
T Consensus        62 g~---~~~~~~~-------~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~~  125 (331)
T 1pff_A           62 GV---EVDFIDM-------AVPGNIEKHLKPN------TRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFAS  125 (331)
T ss_dssp             TC---EEEEECT-------TSTTHHHHTCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTH
T ss_pred             CC---EEEEeCC-------CCHHHHHHhhcCC------CeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCcc
Confidence            88   8888875       3778888888643      3478889999999999999999999999 9999999999987


Q ss_pred             ccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchh
Q 037144          275 SACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSC  319 (502)
Q Consensus       275 ~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~  319 (502)
                      +....+.  .     .++|.++.++||+++.|.+  +|+++.+++..
T Consensus       126 ~~~~~~~--~-----~~~d~~~~s~~K~~~~~~~r~~G~~~~~~~~~  165 (331)
T 1pff_A          126 PILTNPL--D-----LGVDIVVHSATKYINGHTDVVAGLVCSRADII  165 (331)
T ss_dssp             HHHCCGG--G-----GTCSEEEEETTTTTSSSSSCCCEEEEECHHHH
T ss_pred             cccCChh--h-----cCCcEEEEECccccCCCCCceEEEEEeCcHHH
Confidence            6654332  1     1689999999999998876  67777765243

>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}

Probab=99.85  E-value=3.1e-20  Score=192.30  Aligned_cols=307  Identities=11%  Similarity=-0.004  Sum_probs=188.7

Q ss_pred             hhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh-HHH
Q 037144          112 PAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA-FQK  190 (502)
Q Consensus       112 p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s-~~~  190 (502)
                      +....+|...++++++++|.+..        .++++|||+||..++.++++           +++.|+++...|.+ +..
T Consensus        87 ~~~~~~e~~a~~~la~~~g~~~~--------~v~~~sGs~a~~~a~~~~~~-----------~Gd~Vl~~~~~~~~~~~~  147 (447)
T 3h7f_A           87 EHVDVVENLARDRAKALFGAEFA--------NVQPHSGAQANAAVLHALMS-----------PGERLLGLDLANGGHLTH  147 (447)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCSEE--------ECCCSSHHHHHHHHHHHHCC-----------TTCEEEEECGGGTCCGGG
T ss_pred             HHHHHHHHHHHHHHHHHcCCCce--------EEEeCCHHHHHHHHHHHhcC-----------CCCEEEecCcccccccch
Confidence            33445665555999999998742        34478899999888776653           67788888888755 211


Q ss_pred             --HHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEe
Q 037144          191 --AAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHV  268 (502)
Q Consensus       191 --aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhV  268 (502)
                        .....|.+. .++.++++++ ++.+|+++|++++++..     |.+|+++.++++++.  |+++|+++|++||+++|+
T Consensus       148 ~~~~~~~g~~~-~~~~~~~~~~-~~~~d~~~l~~~i~~~~-----~~~i~~~~~~~~~~~--~l~~i~~l~~~~g~lli~  218 (447)
T 3h7f_A          148 GMRLNFSGKLY-ENGFYGVDPA-THLIDMDAVRATALEFR-----PKVIIAGWSAYPRVL--DFAAFRSIADEVGAKLLV  218 (447)
T ss_dssp             TCTTSHHHHSS-EEEEECCCTT-TCSCCHHHHHHHHHHHC-----CSEEEEECSSCCSCC--CHHHHHHHHHHHTCEEEE
T ss_pred             hhhhhhcCCee-EEEEcCcCcc-cCCcCHHHHHHHHHhcC-----CeEEEEcCCCCCCcc--CHHHHHHHHHHcCCEEEE
Confidence              112222200 4556666543 57899999999997532     236666666766654  999999999999999999


Q ss_pred             ecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcC-CcccccCccCCCCCcccccCC
Q 037144          269 DAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLST-NPQYLKNEATDQEPKEQEVGY  347 (502)
Q Consensus       269 DaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~  347 (502)
                      |++|+.+..........   ++.+|+++.++||++++|.+ |+++.++ .... .+.. ..++...              
T Consensus       219 Dea~~~g~~~~g~~~~~---~~~~di~~~s~sK~l~G~~g-G~i~~~~-~~~~-~l~~~~~~~~~~--------------  278 (447)
T 3h7f_A          219 DMAHFAGLVAAGLHPSP---VPHADVVSTTVHKTLGGGRS-GLIVGKQ-QYAK-AINSAVFPGQQG--------------  278 (447)
T ss_dssp             ECTTTHHHHHTTSSCCS---TTTCSEEEEESSGGGCCCSC-EEEEECG-GGHH-HHHHHHTTTTCS--------------
T ss_pred             ECCchhhhhcCCCCCCC---CCCCcEEEecCCcCCCCCCe-EEEEECH-HHHH-HHhhhcCCcccC--------------
Confidence            99986544322211111   23689999999999987765 7776654 2221 1110 0011100              


Q ss_pred             CcccccCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEecC-CCeeEEEEEeecCcchh
Q 037144          348 KDWQITLCRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD----KRFEVAFP-RNFSLVCFRVTPSAVMD  421 (502)
Q Consensus       348 ~~~~~~~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~----~~~~l~~~-~~~~~v~f~~~~~~~~~  421 (502)
                             +.. ....++..++.....+++.++.++..++++++.+.|++.    +|++++.. ...+++.+.+.+.+.. 
T Consensus       279 -------~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-  350 (447)
T 3h7f_A          279 -------GPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAPDVAKAGVSVVSGGTDVHLVLVDLRDSPLD-  350 (447)
T ss_dssp             -------SCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSHHHHHTTCEEGGGSCSSSEEEEECTTSSCC-
T ss_pred             -------CccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhccccCCCeEEecCCCCCCEEEEEcCCCCCC-
Confidence                   000 012344445555445678889999999999999999876    57888742 3445555555433210 


Q ss_pred             hhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEE---ee---eECCEEEEEEEecCC---CCcHHHHHHHH
Q 037144          422 KLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMT---HA---IVGGIYVLRFAAGNS---MTMESHVRAAW  492 (502)
Q Consensus       422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~---~~---~~~g~~~lR~~~~~~---~t~~~di~~~~  492 (502)
                                                ...+.+.+.+.|.++..   +.   .......+|++....   ..+++++++++
T Consensus       351 --------------------------~~~~~~~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~~~~~~~~~~~eei~~~~  404 (447)
T 3h7f_A          351 --------------------------GQAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGDTEFTEVA  404 (447)
T ss_dssp             --------------------------HHHHHHHHHHTTEECBC-------------CEEEEECHHHHHHTCCHHHHHHHH
T ss_pred             --------------------------HHHHHHHHHHCCeEEecccCCCCCCCCCCCCceeccCHHHhhCCCCHHHHHHHH
Confidence                                      12333444445754321   11   112245699986422   14678999999


Q ss_pred             HHHHHHHH
Q 037144          493 TVVQEHLE  500 (502)
Q Consensus       493 ~~l~~~~~  500 (502)
                      +.|.++.+
T Consensus       405 ~~l~~~l~  412 (447)
T 3h7f_A          405 DIIATALA  412 (447)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHh
Confidence            99988764

>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}

Probab=99.84  E-value=6e-20  Score=187.87  Aligned_cols=218  Identities=9%  Similarity=0.067  Sum_probs=158.1

Q ss_pred             HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHH---
Q 037144          117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQ---  193 (502)
Q Consensus       117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~---  193 (502)
                      ...++.+++++++|.+         ..++++||++|+..++.+...           +++.|+++...|.+....++   
T Consensus        82 ~~~~l~~~la~~~g~~---------~~~~~~sG~~Ai~~al~~l~~-----------~Gd~Vi~~~~~y~~~~~~~~~~~  141 (414)
T 3ndn_A           82 TVSVFEERLRLIEGAP---------AAFATASGMAAVFTSLGALLG-----------AGDRLVAARSLFGSCFVVCSEIL  141 (414)
T ss_dssp             HHHHHHHHHHHHHTCS---------EEEEESSHHHHHHHHHHTTCC-----------TTCEEEEESCCCHHHHHHHHTHH
T ss_pred             HHHHHHHHHHHHHCCC---------cEEEECCHHHHHHHHHHHHhC-----------CCCEEEEcCCccchHHHHHHHHH
Confidence            3445566788888864         468999999998777765532           67788888889988766654   


Q ss_pred             -HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccc
Q 037144          194 -IVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAY  272 (502)
Q Consensus       194 -~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~  272 (502)
                       ..|+   +++.+|.+       |+++|+++|++++      .+|+++.++|++|.+.|+++|+++|+++|+++++|++|
T Consensus       142 ~~~g~---~~~~v~~~-------d~~~l~~ai~~~t------~~v~le~p~NptG~~~~l~~i~~la~~~g~~livDe~~  205 (414)
T 3ndn_A          142 PRWGV---QTVFVDGD-------DLSQWERALSVPT------QAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLDNVF  205 (414)
T ss_dssp             HHTTC---EEEEECTT-------CHHHHHHHTSSCC------SEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTT
T ss_pred             HHcCc---EEEEeCCC-------CHHHHHHhcCCCC------eEEEEECCCCCCCccccHHHHHHHHHHcCCEEEEECCC
Confidence             4888   89888864       8899999986543      37888999999999999999999999999999999999


Q ss_pred             ccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcc
Q 037144          273 AGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDW  350 (502)
Q Consensus       273 g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~  350 (502)
                      +.+....+.  .     .++|.++.+++|+++.+..  .|+++.++. .+...+.......                   
T Consensus       206 ~~~~~~~~~--~-----~g~div~~S~sK~l~~~G~~~~G~vv~~~~-~~~~~l~~~~~~~-------------------  258 (414)
T 3ndn_A          206 ATPLLQQGF--P-----LGVDVVVYSGTKHIDGQGRVLGGAILGDRE-YIDGPVQKLMRHT-------------------  258 (414)
T ss_dssp             THHHHCCCG--G-----GTCSEEEEETTTTTTCSSCCCCEEEEECHH-HHTTHHHHHHHHH-------------------
T ss_pred             cccccCCch--h-----cCCCeEeccCCccccCCCCceEEEEEECHH-HHHHHHHHHHHHc-------------------
Confidence            865443332  1     1689999999999976542  676666543 2221111000000                   


Q ss_pred             cccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q 037144          351 QITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAF  403 (502)
Q Consensus       351 ~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~  403 (502)
                          +....++..|.+++  +.+.+..++++..++++++.+.|++.|+++.+.
T Consensus       259 ----g~~~~~~~a~~~~~--~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~  305 (414)
T 3ndn_A          259 ----GPAMSAFNAWVLLK--GLETLAIRVQHSNASAQRIAEFLNGHPSVRWVR  305 (414)
T ss_dssp             ----CCCCCHHHHHHHHH--HGGGHHHHHHHHHHHHHHHHHHHHTCTTEEEEE
T ss_pred             ----CCCCCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCCCEeEEE
Confidence                11124455666665  446678888999999999999999999887543

>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*

Probab=99.84  E-value=6.5e-20  Score=186.90  Aligned_cols=361  Identities=10%  Similarity=0.015  Sum_probs=215.5

Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCcccccCCCCCCHHHHHHHHHHhhcC-CCCcccccChhhHHHHHHHHHHHHHhcCCCCc
Q 037144           56 VETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFN-VVGLDWISSPAAVELENIVMDWLGQMLDLPKS  134 (502)
Q Consensus        56 ~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n-~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~  134 (502)
                      .-.+.+.+...-.++..+.....|+.+...++..+. +.+.+..... .....|....+..++.+.+.+|+...+|.+-.
T Consensus        15 i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~~~~~-v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~   93 (401)
T 7aat_A           15 ILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNC-VRKAEAMIAAKKMDKEYLPIAGLADFTRASAELALGENSEAFK   93 (401)
T ss_dssp             HHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHH-HHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHH
T ss_pred             hHHHHHHHhhCCCCCceeeeeeeEECCCCCEechHH-HHHHHHHhcccccccCCCCCCCCHHHHHHHHHHhcCCCccccc
Confidence            344444444433333333333334444433333333 3443333332 23445666667788999999998877775211


Q ss_pred             cCcCCCCcEEE--cCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCC
Q 037144          135 FLFSGNGGGVI--QGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSS  212 (502)
Q Consensus       135 ~~~~~~~~g~~--t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~  212 (502)
                      .     ...++  |+||++|+..++.+.+.. .+       +++.|+++..+|.++...++..|.   +++.+|++..++
T Consensus        94 ~-----~~i~~v~t~G~~~al~~~~~~l~~~-~~-------~gd~Vlv~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~  157 (401)
T 7aat_A           94 S-----GRYVTVQGISGTGSLRVGANFLQRF-FK-------FSRDVYLPKPSWGNHTPIFRDAGL---QLQAYRYYDPKT  157 (401)
T ss_dssp             T-----TCEEEEEEEHHHHHHHHHHHHHHHH-CT-------TCCEEEEEESCCTTHHHHHHHTTC---EEEEEECEETTT
T ss_pred             c-----CceEEEecCcchHHHHHHHHHHHHh-cc-------CCCEEEEcCCCchhHHHHHHHcCC---eeEeeeeecccc
Confidence            0     14666  999999998887665421 11       577888999999999999999999   999999864345


Q ss_pred             cccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc---CChhHHHHHHHHhCCEEEeecccccccccCcc-----chh
Q 037144          213 YGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPE-----FRH  284 (502)
Q Consensus       213 ~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~-----~~~  284 (502)
                      +.+|++.+++.+++.   ...+.+|+++.++|+||.+   +++++|+++|++||+++++|.+|+.+......     ...
T Consensus       158 ~~~d~~~l~~~l~~~---~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~  234 (401)
T 7aat_A          158 CSLDFTGAMEDISKI---PEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRH  234 (401)
T ss_dssp             TEECHHHHHHHHTTS---CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHH
T ss_pred             CccCHHHHHHHHHhC---CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHH
Confidence            799999999888652   1234688889999999976   56889999999999999999999776543210     111


Q ss_pred             hhcCCCCCCeeEEccCCcCCCC-CcceEEEee--CchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCch
Q 037144          285 FIDGVECVDSFSFNPHKWLFTT-LDCCCLWVK--DPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSL  361 (502)
Q Consensus       285 ~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r--~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al  361 (502)
                      . .....-..++.++||.++.| ..+|++++.  ++............+.....                   . ...+.
T Consensus       235 ~-~~~~~~~i~~~S~sK~~~~~G~RiG~l~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~-~~~~~  293 (401)
T 7aat_A          235 F-IEQGIDVVLSQSYAKNMGLYGERAGAFTVICRDAEEAKRVESQLKILIRPMY-------------------S-NPPMN  293 (401)
T ss_dssp             H-HHTTCCCEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHHHH-------------------S-SCCHH
T ss_pred             H-HhcCCcEEEEecCCcccccccCceEEEEEEeCCHHHHHHHHHHHHHHHHhcc-------------------C-CCChH
Confidence            1 11223446778899999744 347887762  33211101000000000000                   0 00122


Q ss_pred             HHHHHHHHh--c------HHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEecCCCeeEEEEEeecCcchhhhhhcccCC
Q 037144          362 KLWVVIRNF--G------VANLRNFIRSHVGMAKLFERLVTSDK---RFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNG  430 (502)
Q Consensus       362 ~~~~~l~~~--g------~~g~~~~~~~~~~la~~l~~~l~~~~---~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~  430 (502)
                      ....+...+  +      .+.+.+..+++.++++++.+.|+++.   ++++. +|..+++.|.-.+              
T Consensus       294 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~-~~~~~~~~~~~~~--------------  358 (401)
T 7aat_A          294 GARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLKKEGSSHNWQHI-TDQIGMFCFTGLK--------------  358 (401)
T ss_dssp             HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHH-HHCCSSEEECCCC--------------
T ss_pred             HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcee-cCCcceEEecCCC--------------
Confidence            222222222  1      34467778888899999999998862   34443 3445555552111              


Q ss_pred             CcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144          431 TYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHL  499 (502)
Q Consensus       431 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~  499 (502)
                                    .   ..+...+.+.|.. +.+       .+|++++. .+++ +|+++++.|+++.
T Consensus       359 --------------~---~~~~~ll~~~gi~-v~~-------~~Ris~~~-~~~~-~i~~~~~~l~~~~  400 (401)
T 7aat_A          359 --------------P---EQVERLTKEFSIY-MTK-------DGRISVAG-VASS-NVGYLAHAIHQVT  400 (401)
T ss_dssp             --------------H---HHHHHHHHHHCEE-CCT-------TCEEEGGG-CCTT-THHHHHHHHHHHH
T ss_pred             --------------H---HHHHHHHHhCCEe-ccC-------CCeEEecc-CChh-hHHHHHHHHHHHh
Confidence                          1   1222222344653 332       26999864 3555 5999999998875

>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*

Probab=99.84  E-value=1.7e-19  Score=183.19  Aligned_cols=215  Identities=13%  Similarity=0.103  Sum_probs=153.4

Q ss_pred             HHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHH----HH
Q 037144          118 ENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKA----AQ  193 (502)
Q Consensus       118 e~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a----a~  193 (502)
                      ..++.+++++++|.+         ..+++++|++|+..++.+...           +++.|+++...|.+....    ++
T Consensus        61 ~~~l~~~la~~~g~~---------~~i~~~sG~~ai~~~~~~~~~-----------~gd~vl~~~~~y~~~~~~~~~~~~  120 (389)
T 3acz_A           61 VEQFEEMVCSIEGAA---------GSAAFGSGMGAISSSTLAFLQ-----------KGDHLIAGDTLYGCTVSLFTHWLP  120 (389)
T ss_dssp             HHHHHHHHHHHHTCS---------EEEEESSHHHHHHHHHTTTCC-----------TTCEEEEESSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCC---------eEEEeCCHHHHHHHHHHHHhC-----------CCCEEEEeCCCchHHHHHHHHHHH
Confidence            334556678888875         257778889999877765432           567888888899886665    57


Q ss_pred             HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccc
Q 037144          194 IVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYA  273 (502)
Q Consensus       194 ~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g  273 (502)
                      ..|+   +++.+|.       .|+++|+++|+++      +.+|+++.++|++|.+.|+++|+++|+++|+++++|++|+
T Consensus       121 ~~g~---~~~~v~~-------~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~livD~~~~  184 (389)
T 3acz_A          121 RFGI---EVDLIDT-------SDVEKVKAAWKPN------TKMVYLESPANPTCKVSDIKGIAVVCHERGARLVVDATFT  184 (389)
T ss_dssp             HTTC---EEEEECT-------TCHHHHHHTCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTT
T ss_pred             HcCC---EEEEECC-------CCHHHHHHhcCCC------CeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCc
Confidence            7898   8888885       3889999988653      3488889999999999999999999999999999999998


Q ss_pred             cccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCccc
Q 037144          274 GSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQ  351 (502)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~  351 (502)
                      .+....+ ..      .++|+++.++||++++|.+  +|+++.++..... .+.....+..                   
T Consensus       185 ~~~~~~~-~~------~~~di~~~S~sK~~~~~~~~~~G~v~~~~~~~~~-~l~~~~~~~g-------------------  237 (389)
T 3acz_A          185 SPCFLKP-LE------LGADIALHSVSKYINGHGDVIGGVSSAKTAEDIA-TIKFYRKDAG-------------------  237 (389)
T ss_dssp             CTTTCCG-GG------TTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHH-HHHHHHHHHC-------------------
T ss_pred             cccccCc-cc------cCCeEEEECChhhccCCCCceeEEEEECcHHHHH-HHHHHHHhcC-------------------
Confidence            7654222 11      1789999999999998877  6888877623322 1111000000                   


Q ss_pred             ccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 037144          352 ITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEV  401 (502)
Q Consensus       352 ~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l  401 (502)
                          .....+..|.+++.+  +.+..++++..++++.+.+.|++.+.++-
T Consensus       238 ----~~~~~~~~~~~~~~l--~~l~~r~~~~~~~~~~l~~~l~~~~~v~~  281 (389)
T 3acz_A          238 ----SLMAPMDAFLCARGM--KTLPIRMQIHMENGLKVAKFLEQHEKIVK  281 (389)
T ss_dssp             ----CCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHHCTTEEE
T ss_pred             ----CCCCHHHHHHHHcCc--cHHHHHHHHHHHHHHHHHHHHHcCCCeeE
Confidence                011335566666554  44566677788888888888888765543

>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*

Probab=99.84  E-value=5.3e-20  Score=188.24  Aligned_cols=326  Identities=13%  Similarity=0.064  Sum_probs=205.2

Q ss_pred             HHHHHHHHhhc-CC-CCcccccChhhHHHHHHHHHHHHHhcCC--CCccCcCCCCcEEE--cCCchHHHHHHHHHHHHHH
Q 037144           91 GIVGEMLSSGF-NV-VGLDWISSPAAVELENIVMDWLGQMLDL--PKSFLFSGNGGGVI--QGTTCEALLCTLTAARDRV  164 (502)
Q Consensus        91 ~~~~~~l~~~~-n~-~~~~~~~~p~~~~le~~~~~~l~~l~g~--~~~~~~~~~~~g~~--t~ggt~a~~~al~~a~~~~  164 (502)
                      ..+.+.+...+ +. ....|...++..++++.+.+|+....|.  +.+       ..++  |+||++|+..++..++.. 
T Consensus        51 ~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~-------~v~~~~t~gg~~a~~~~~~~~~~~-  122 (412)
T 1ajs_A           51 PVVRKVEQRIANNSSLNHEYLPILGLAEFRTCASRLALGDDSPALQEK-------RVGGVQSLGGTGALRIGAEFLARW-  122 (412)
T ss_dssp             HHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTT-------CEEEEEEEHHHHHHHHHHHHHHHH-
T ss_pred             HHHHHHHHHhhhChhhccCCCCCCCCHHHHHHHHHHHhcCCCCccCCC-------cEEEEECCCcHHHHHHHHHHHHHh-
Confidence            44566665555 22 2334655566788888888888665553  222       5888  999999998876543321 


Q ss_pred             HHHhCccCCCC-----eEEEeCCCCchhHHHHHHHcCCCCCC-EEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEE
Q 037144          165 LKKIGRENISK-----LVVYSSDQTHCAFQKAAQIVGIDRKN-IRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLC  238 (502)
Q Consensus       165 ~~~~~~~~~~~-----~~v~~s~~~H~s~~~aa~~~Glg~~~-v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv  238 (502)
                       .       ++     +.|+++..+|.++...++..|.   + ++.+|++.++++.+|+++|++++++.   +.+..+|+
T Consensus       123 -~-------~g~~~~~d~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~v~  188 (412)
T 1ajs_A          123 -Y-------NGTNNKDTPVYVSSPTWENHNGVFTTAGF---KDIRSYRYWDTEKRGLDLQGFLSDLENA---PEFSIFVL  188 (412)
T ss_dssp             -S-------SSSSCCCSCEEEEESCCTHHHHHHHHTTC---SCEEEEECEETTTTEECHHHHHHHHHHS---CTTCEEEE
T ss_pred             -C-------cCcCCCCCeEEEcCCCcHHHHHHHHHcCC---ceeEEEeeecCCCCccCHHHHHHHHHhC---CCCcEEEE
Confidence             1       44     6788888899999999999999   9 99999853235789999999999752   11235777


Q ss_pred             EecCCcccccc---CChhHHHHHHHHhCCEEEeecccccccccC---c--cchhhhcCCCCCCeeEEccCCcCCC-CCcc
Q 037144          239 ATVGTTAITAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACIC---P--EFRHFIDGVECVDSFSFNPHKWLFT-TLDC  309 (502)
Q Consensus       239 ~t~gtt~~G~i---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~---~--~~~~~~~~~~~aDsi~~~~hK~l~~-p~~~  309 (502)
                      .+.++|+||.+   +++++|+++|++||+++++|++|.++....   +  .... +.....-+.+..++||.++. ...+
T Consensus       189 ~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~s~sK~~~~~G~ri  267 (412)
T 1ajs_A          189 HACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRY-FVSEGFELFCAQSFSKNFGLYNERV  267 (412)
T ss_dssp             ESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHH-HHHTTCCEEEEEECTTTSCCGGGCE
T ss_pred             ECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHH-HhccCCcEEEEEecccccCCCCcce
Confidence            89999999998   456789999999999999999987765421   1  1111 11111223678889999875 3447


Q ss_pred             eEEEee--CchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--c------HHHHHHHH
Q 037144          310 CCLWVK--DPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--G------VANLRNFI  379 (502)
Q Consensus       310 g~~~~r--~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g------~~g~~~~~  379 (502)
                      |++++.  ++..+.........+...                 +..+   ...+..+++...+  +      .+.++++.
T Consensus       268 G~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~---~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~  327 (412)
T 1ajs_A          268 GNLTVVAKEPDSILRVLSQMQKIVRV-----------------TWSN---PPAQGARIVARTLSDPELFHEWTGNVKTMA  327 (412)
T ss_dssp             EEEEEECSSHHHHHHHHHHHHHHHHT-----------------TTSS---CCSHHHHHHHHHHHSHHHHHHHHHHHHHHH
T ss_pred             EEEEEecCCHHHHHHHHHHHHHHHhc-----------------ccCC---CChHHHHHHHHHHcCcchhHHHHHHHHHHH
Confidence            888872  443211111000000000                 0000   0223333333332  1      24677888


Q ss_pred             HHHHHHHHHHHHHHhcCC---CeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH
Q 037144          380 RSHVGMAKLFERLVTSDK---RFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN  456 (502)
Q Consensus       380 ~~~~~la~~l~~~l~~~~---~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~  456 (502)
                      ++..++++++.+.|++++   ++++. .+..+++.|.-.+                               ...+...+.
T Consensus       328 ~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~~~~~~~~~~-------------------------------~~~~~~~l~  375 (412)
T 1ajs_A          328 DRILSMRSELRARLEALKTPGTWNHI-TDQIGMFSFTGLN-------------------------------PKQVEYLIN  375 (412)
T ss_dssp             HHHHHHHHHHHHHHHHTTCSSCCHHH-HHCCSSEEECCCC-------------------------------HHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhCCCCCeeEE-cCCCceEEEeCCC-------------------------------HHHHHHHHH
Confidence            899999999999999874   36654 3344444442111                               122333444


Q ss_pred             hcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          457 VSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       457 ~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      +.|.. +.+       .+|++++.  .++++++++++.|+++.++
T Consensus       376 ~~gv~-v~~-------~~Ris~~~--~~~~~i~~~~~~l~~~l~~  410 (412)
T 1ajs_A          376 QKHIY-LLP-------SGRINMCG--LTTKNLDYVATSIHEAVTK  410 (412)
T ss_dssp             TTCEE-CCT-------TSEEEGGG--CCTTTHHHHHHHHHHHHHH
T ss_pred             hCCEE-ecC-------CcEEEeee--CCHHHHHHHHHHHHHHHHh
Confidence            56754 333       26999873  3566999999999988765

>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0

Probab=99.83  E-value=2.5e-19  Score=181.91  Aligned_cols=296  Identities=13%  Similarity=0.075  Sum_probs=182.3

Q ss_pred             HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcC
Q 037144          117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVG  196 (502)
Q Consensus       117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~G  196 (502)
                      ...++.+++++++|. +        ..++++|||+|+..++.+++.......+.. .+++.|++...+|++....+..++
T Consensus        79 ~~~~l~~~la~~~g~-~--------~v~~~~~gt~a~~~al~~~~~~~~~~~~~~-~~~~~vi~~~~~~~~~~~~~~~~~  148 (392)
T 3ruy_A           79 QLGPWYEKVAKLTNK-E--------MVLPMNTGAEAVETAIKTARRWAYDVKKVE-ANRAEIIVCEDNFHGRTMGAVSMS  148 (392)
T ss_dssp             THHHHHHHHHHHHTC-S--------EEEEESSHHHHHHHHHHHHHHHHHHTSCCC-TTCCEEEEETTCCCCSSHHHHHTC
T ss_pred             HHHHHHHHHHHhcCC-C--------EEEEeCcHHHHHHHHHHHHHHhhhhccCCC-CCCcEEEEEcCCcCCCCHhhhhcc
Confidence            345566788888882 2        589999999999999988765321111110 135577777777765544443332


Q ss_pred             CC----------CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHHHHHh
Q 037144          197 ID----------RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDVAKQF  262 (502)
Q Consensus       197 lg----------~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~~~~  262 (502)
                      ..          ...+..++.       .|+++|+++|+++      +.+|+++.++|++|.+.|    +++|+++|++|
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~  215 (392)
T 3ruy_A          149 SNEEYKRGFGPMLPGIIVIPY-------GDLEALKAAITPN------TAAFILEPIQGEAGINIPPAGFLKEALEVCKKE  215 (392)
T ss_dssp             SCTTTTTTCCSCCSSEEEECT-------TCHHHHHHHCCTT------EEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTT
T ss_pred             CChhhccccCCCCCCCeeeCc-------ccHHHHHHHhccC------eEEEEEeCccCCCCCccCCHHHHHHHHHHHHHc
Confidence            21          012444432       2899999998733      458888889999999998    99999999999


Q ss_pred             CCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCcccccCccCCCCCc
Q 037144          263 GIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPK  341 (502)
Q Consensus       263 g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~  341 (502)
                      |+++|+|++|+++............++ ..|.++++  |++++. ...|+++.++ ... +.+..   ....        
T Consensus       216 ~~~li~De~~~~~~~~g~~~~~~~~~~-~~d~~~~S--K~l~gG~~~~G~~~~~~-~~~-~~~~~---~~~~--------  279 (392)
T 3ruy_A          216 NVLFVADEIQTGLGRTGKVFACDWDNV-TPDMYILG--KALGGGVFPISCAAANR-DIL-GVFEP---GSHG--------  279 (392)
T ss_dssp             TCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGGTTTSCCEEEEECH-HHH-TTCCT---TSSC--------
T ss_pred             CCEEEEeechhCCCccccchhhhccCC-CCCEEEEc--hhhhCChhhhEEEEECH-HHH-hhhcc---CCcC--------
Confidence            999999999975432211111111122 46888775  987653 4578877753 222 11111   0000        


Q ss_pred             ccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC--CCeEEecCCCeeEEEEEeecCcc
Q 037144          342 EQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD--KRFEVAFPRNFSLVCFRVTPSAV  419 (502)
Q Consensus       342 ~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~--~~~~l~~~~~~~~v~f~~~~~~~  419 (502)
                       .     .+      ....+.+.++...+.....++..++..++++++.+.|+++  +.+... ++..+++.|.+...  
T Consensus       280 -~-----~~------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~g~~~~~~~~~~--  344 (392)
T 3ruy_A          280 -S-----TF------GGNPLACAVSIAALEVLEEEKLTERSLQLGEKLVGQLKEIDNPMITEV-RGKGLFIGIELNEP--  344 (392)
T ss_dssp             -C-----SS------TTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTTCCCTTEEEE-EEETTEEEEEESSC--
T ss_pred             -C-----CC------CCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhcCCCceEE-EeeeeEEEEEEcch--
Confidence             0     00      1123333333333221112567888899999999999887  334443 33455666665321  


Q ss_pred             hhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144          420 MDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHL  499 (502)
Q Consensus       420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~  499 (502)
                                                  ..++.+.|.++|.. +.+.   +..++|++++ ..+++++++++++.|+++.
T Consensus       345 ----------------------------~~~l~~~l~~~gi~-v~~~---~~~~iRi~~~-~~~~~~~i~~~~~~l~~~l  391 (392)
T 3ruy_A          345 ----------------------------ARPYCEQLKAAGLL-CKET---HENVIRIAPP-LVISEEDLEWAFQKIKAVL  391 (392)
T ss_dssp             ----------------------------SHHHHHHHHTTTEE-CCCB---TTTEEEECCC-TTCCHHHHHHHHHHHHHHH
T ss_pred             ----------------------------HHHHHHHHHHCCcE-EecC---CCCEEEEECC-CCCCHHHHHHHHHHHHHHh
Confidence                                        23567777777864 3332   3568999975 4567789999999998875

>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1

Probab=99.83  E-value=4.7e-20  Score=188.69  Aligned_cols=356  Identities=10%  Similarity=-0.012  Sum_probs=214.8

Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCcccccCCCCCCHHHHHHHHHHh-hcCCC-CcccccChhhHHHHHHHHHHHHHhcCCC-
Q 037144           56 VETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSS-GFNVV-GLDWISSPAAVELENIVMDWLGQMLDLP-  132 (502)
Q Consensus        56 ~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~-~~n~~-~~~~~~~p~~~~le~~~~~~l~~l~g~~-  132 (502)
                      ...+.+.+.+.-.+......+..++++..... ++..+.+.+.. .+... ...|...++..++++.+.+|+....|.+ 
T Consensus        16 ~~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~-~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~   94 (412)
T 1yaa_A           16 LFGIKQRYGQDQRATKVDLGIGAYRDDNGKPW-VLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNAAKIIFGTQSDAL   94 (412)
T ss_dssp             THHHHHHHHTCCCSSCEECSSCCCBCTTSCBC-CCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHH
T ss_pred             HHHHHHHHhcCCCCCeEEEeeeeeeCCCCCCC-CcHHHHHHHHhhhcCcccccCCCCCCCcHHHHHHHHHHHhcCCCCCC
Confidence            44555555432112223333333333322222 33446666666 55432 3346555667889999988887766632 


Q ss_pred             -CccCcCCCCcEEE--cCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEec-C
Q 037144          133 -KSFLFSGNGGGVI--QGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKT-T  208 (502)
Q Consensus       133 -~~~~~~~~~~g~~--t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~-~  208 (502)
                       .+       ..++  |+||++|+..++...+..  .       +++.|+++..+|.++...++..|+   +++.+|+ +
T Consensus        95 ~~~-------~i~~~~t~g~~~a~~~~~~~~~~~--~-------~gd~Vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~  155 (412)
T 1yaa_A           95 QED-------RVISVQSLSGTGALHISAKFFSKF--F-------PDKLVYLSKPTWANHMAIFENQGL---KTATYPYWA  155 (412)
T ss_dssp             HTT-------CEEEEEEEHHHHHHHHHHHHHHHH--C-------TTCCEEEEESCCTTHHHHHHTTTC---CEEEEECEE
T ss_pred             Ccc-------eEEEEeccchHhHHHHHHHHHHHh--C-------CCCEEEEeCCCCccHHHHHHHcCc---eEEEEeeec
Confidence             22       5788  999999997774433221  1       456788888899999999999999   9999998 4


Q ss_pred             CCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hhHHHHHHHHhCCEEEeecccccccccC---c--
Q 037144          209 KSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACIC---P--  280 (502)
Q Consensus       209 ~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~---~--  280 (502)
                      ++ ++.+|+++|++++++..   ....+++.+.++|+||.+-+   +++|+++|++||+++++|++|+.+....   +  
T Consensus       156 ~~-~~~~d~~~l~~~l~~~~---~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~  231 (412)
T 1yaa_A          156 NE-TKSLDLNGFLNAIQKAP---EGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAY  231 (412)
T ss_dssp             TT-TTEECHHHHHHHHHHSC---TTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTH
T ss_pred             CC-CCccCHHHHHHHHHhCC---CCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhH
Confidence            32 46899999999997531   11245566899999999854   6688999999999999999997654321   1  


Q ss_pred             cchhhhcCCCC---CCeeEEccCCcCCC-CCcceEEE--e----eCchh---hhhhhcCCcccccCccCCCCCcccccCC
Q 037144          281 EFRHFIDGVEC---VDSFSFNPHKWLFT-TLDCCCLW--V----KDPSC---LLSTLSTNPQYLKNEATDQEPKEQEVGY  347 (502)
Q Consensus       281 ~~~~~~~~~~~---aDsi~~~~hK~l~~-p~~~g~~~--~----r~~~~---l~~~~~~~~~yl~~~~~~~~~~~~~~~~  347 (502)
                      ..... .....   -+.++.++||.++. ....|+++  .    +++..   +.+.+..   .....             
T Consensus       232 ~~~~~-~~~~~~~~~~i~~~s~sK~~~~~GlriG~~~~~~~~~~~~~~~~~~l~~~l~~---~~~~~-------------  294 (412)
T 1yaa_A          232 AVRLG-VEKLSTVSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQNKTIKPAVTSQLAK---IIRSE-------------  294 (412)
T ss_dssp             HHHHH-HHHTTTTCCEEEEEECTTTSCCGGGCEEEEEEECCSCTTHHHHHHHHHHHHHH---HHHTT-------------
T ss_pred             HHHHH-HhcCCCCcceEEEeccCCCCCCcCCcceEEEEEecCCCCCHHHHHHHHHHHHH---HHhhc-------------
Confidence            11111 11111   24567789999874 33468877  4    23331   1111111   00000             


Q ss_pred             CcccccCCCCCCchHHHHHHHHh--c------HHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEecCCCeeEEEEEeec
Q 037144          348 KDWQITLCRRFRSLKLWVVIRNF--G------VANLRNFIRSHVGMAKLFERLVTSDK---RFEVAFPRNFSLVCFRVTP  416 (502)
Q Consensus       348 ~~~~~~~sr~~~al~~~~~l~~~--g------~~g~~~~~~~~~~la~~l~~~l~~~~---~~~l~~~~~~~~v~f~~~~  416 (502)
                            .+ ....+..+++.+.+  +      .++++++.++..++++++.+.|++++   ++++. ++..+++.|.-.+
T Consensus       295 ------~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~~~~~~~~~~  366 (412)
T 1yaa_A          295 ------VS-NPPAYGAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLGTPGNWDHI-VNQCGMFSFTGLT  366 (412)
T ss_dssp             ------TS-SCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCTHH-HHCCSSEEECCCC
T ss_pred             ------cC-CCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeee-ccCceEEEeeCCC
Confidence                  00 00222333333332  1      24678888889999999999998864   36654 3444555542111


Q ss_pred             CcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHH
Q 037144          417 SAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQ  496 (502)
Q Consensus       417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~  496 (502)
                                                     ...+...+.+.|.. +.+       ++|++++.  .+++++++++++|+
T Consensus       367 -------------------------------~~~~~~~l~~~gi~-v~~-------~~Ris~~~--~~~~~i~~~~~~l~  405 (412)
T 1yaa_A          367 -------------------------------PQMVKRLEETHAVY-LVA-------SGRASIAG--LNQGNVEYVAKAID  405 (412)
T ss_dssp             -------------------------------HHHHHHHHHHHCEE-CCT-------TSEEEGGG--CCTTTHHHHHHHHH
T ss_pred             -------------------------------HHHHHHHHHhCCEE-ecc-------CcEEEEcc--CCHhHHHHHHHHHH
Confidence                                           12233333345754 333       47999863  35669999999999


Q ss_pred             HHHHh
Q 037144          497 EHLEA  501 (502)
Q Consensus       497 ~~~~~  501 (502)
                      ++.+.
T Consensus       406 ~~~~~  410 (412)
T 1yaa_A          406 EVVRF  410 (412)
T ss_dssp             HHHHH
T ss_pred             HHHHh
Confidence            88764

>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}

Probab=99.83  E-value=7.3e-19  Score=175.72  Aligned_cols=281  Identities=9%  Similarity=-0.009  Sum_probs=188.5

Q ss_pred             HHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCC
Q 037144          120 IVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDR  199 (502)
Q Consensus       120 ~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~  199 (502)
                      ++++++++++|.+.+       ..++|+|+++++..++.+..             ++.|+++..+|.++..+++..|.  
T Consensus        54 ~lr~~la~~~~~~~~-------~i~~t~g~~~al~~~~~~l~-------------gd~Vi~~~p~~~~~~~~~~~~g~--  111 (350)
T 3fkd_A           54 TLRQMLAKRNSVDNN-------AILVTNGPTAAFYQIAQAFR-------------GSRSLIAIPSFAEYEDACRMYEH--  111 (350)
T ss_dssp             HHHHHHHHHTTCCGG-------GEEEESHHHHHHHHHHHHTT-------------TCEEEEEESCCHHHHHHHHHTTC--
T ss_pred             HHHHHHHHHhCcCHH-------HEEEcCCHHHHHHHHHHHHC-------------CCEEEEeCCCcHHHHHHHHHcCC--
Confidence            466778888898654       58999999999977766542             35678888999999999999999  


Q ss_pred             CCEEEEec-CCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhC-CEEEeecccccccc
Q 037144          200 KNIRAIKT-TKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFG-IWVHVDAAYAGSAC  277 (502)
Q Consensus       200 ~~v~~v~~-~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g-~~lhVDaA~g~~~~  277 (502)
                       +++.+|+ ++.+  .+++        ++      +.+|+++.++|++|.+-|+++|.++++.++ .++++|++|+.+..
T Consensus       112 -~~~~v~~~~~~~--~~~~--------~~------~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~li~Dea~~~~~~  174 (350)
T 3fkd_A          112 -EVCFYPSNEDIG--EADF--------SN------MDFCWLCNPNNPDGRLLQRTEILRLLNDHPDTTFVLDQSYVSFTT  174 (350)
T ss_dssp             -EEEEEETTSCGG--GSCC--------TT------CSEEEEESSCTTTCCCCCHHHHHHHHHHCTTSEEEEECTTTTSCS
T ss_pred             -eEEEEecCCccc--cCcc--------CC------CCEEEEeCCCCCcCCCCCHHHHHHHHHhCCCCEEEEECchhhhcc
Confidence             9999999 6422  4454        11      347788999999999999999999999876 79999999976543


Q ss_pred             cCccchhhhcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCC
Q 037144          278 ICPEFRHFIDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCR  356 (502)
Q Consensus       278 ~~~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr  356 (502)
                      ........+. ....+.++.+++|+++ .+...|+++. ++.... .+......                   +      
T Consensus       175 ~~~~~~~~~~-~~~~~i~~~S~sK~~~~~G~r~G~~~~-~~~~~~-~~~~~~~~-------------------~------  226 (350)
T 3fkd_A          175 EEVIRPADIK-GRKNLVMVYSFSHAYGIPGLRIGYIVA-NKDFMK-RVAAFSTP-------------------W------  226 (350)
T ss_dssp             SCCCCGGGGT-TCSSEEEEEESHHHHSCGGGCCEEEEC-CHHHHH-HHHTTCCT-------------------T------
T ss_pred             CcchhhHHhh-cCCCEEEEecCchhccCcchheEeEEe-CHHHHH-HHHHhCCC-------------------C------
Confidence            2211111111 1234477788999997 4466788877 444332 22111000                   0      


Q ss_pred             CCCchHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccc
Q 037144          357 RFRSLKLWVVIRNFGV-ANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQY  435 (502)
Q Consensus       357 ~~~al~~~~~l~~~g~-~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~  435 (502)
                      ....+..+++...+.. +.+.+.+++..++++++.+.|+++|++++. ++..+++.++++...                 
T Consensus       227 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~-----------------  288 (350)
T 3fkd_A          227 AVNALAIEAAKFILIHPAQFTLPIRKWQRNTVDFITALNRLDGVEVH-PSGTTFFLLRLKKGT-----------------  288 (350)
T ss_dssp             CSCHHHHHHHHHHHHCTTTTCCCHHHHHHHHHHHHHHHHHSTTEEEC-CCSSSEEEEEESSSC-----------------
T ss_pred             CCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEC-CCCCcEEEEECCCCC-----------------
Confidence            0123344444444321 113334444558899999999999999985 556666666664311                 


Q ss_pred             cccchhHhhHHHHHHHHHHHHh-cCcEEEEeeeEC--CEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          436 RQFSEEERTNEFNRELLESINV-SGKVFMTHAIVG--GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       436 ~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                                  ..++.+.|.+ .|..+.++..+.  +..++|++++    +++++++++++|+++.++
T Consensus       289 ------------~~~l~~~L~~~~gi~v~~g~~f~~~~~~~iRis~~----~~~~~~~l~~al~~~~~~  341 (350)
T 3fkd_A          289 ------------AAELKKYMLEEYNMLIRDASNFRGLDESYVRITTQ----RPAQNQLFIKALETFLEK  341 (350)
T ss_dssp             ------------HHHHHHHHHHTTCEECEECTTSTTCCTTEEEEECC----CHHHHHHHHHHHHHHHTC
T ss_pred             ------------HHHHHHHHHHHCCEEEEeCccCCCCCCCEEEEEcC----CHHHHHHHHHHHHHHHHH
Confidence                        3466777777 676544433332  2579999975    566999999999988754

>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*

Probab=99.83  E-value=1.2e-19  Score=185.48  Aligned_cols=233  Identities=11%  Similarity=0.111  Sum_probs=161.3

Q ss_pred             cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144          110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ  189 (502)
Q Consensus       110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~  189 (502)
                      ..|...++|+    .+++++|.+         ..++++||++|+..++.+...           +++.|+++...|.+..
T Consensus        80 ~~p~~~~le~----~lA~l~g~~---------~~i~~ssGt~Ai~~al~~l~~-----------~Gd~Vi~~~~~y~~~~  135 (415)
T 2fq6_A           80 GTLTHFSLQQ----AMCELEGGA---------GCVLFPCGAAAVANSILAFIE-----------QGDHVLMTNTAYEPSQ  135 (415)
T ss_dssp             CCHHHHHHHH----HHHHHHTCS---------EEEEESSHHHHHHHHHHTTCC-----------TTCEEEEETTSCHHHH
T ss_pred             CCchHHHHHH----HHHHHhCCC---------eEEEeCCHHHHHHHHHHHHhC-----------CCCEEEEeCCCchHHH
Confidence            4455555555    567777764         257778999999877765422           5678888888998876


Q ss_pred             HHH----HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHH--hC
Q 037144          190 KAA----QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQ--FG  263 (502)
Q Consensus       190 ~aa----~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~--~g  263 (502)
                      ..+    +..|+   +++.++.+       |+++|+++|++++      .+|++..++|++|.+.|+++|+++|++  +|
T Consensus       136 ~~~~~~l~~~G~---~v~~v~~~-------d~~~le~ai~~~t------klV~~e~~~NptG~v~dl~~I~~la~~~~~g  199 (415)
T 2fq6_A          136 DFCSKILSKLGV---TTSWFDPL-------IGADIVKHLQPNT------KIVFLESPGSITMEVHDVPAIVAAVRSVVPD  199 (415)
T ss_dssp             HHHHHTGGGGTC---EEEEECTT-------CGGGGGGGCCTTE------EEEEEESSCTTTCCCCCHHHHHHHHHHHCTT
T ss_pred             HHHHHHHHHcCc---EEEEECCC-------CHHHHHHhhccCC------cEEEEECCCCCCCEeecHHHHHHHHHhhcCC
Confidence            554    34688   88888753       7888999886543      488889999999999999999999999  99


Q ss_pred             CEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCc
Q 037144          264 IWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPK  341 (502)
Q Consensus       264 ~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~  341 (502)
                      +++|||++|+.+....| ..      .++|.++.++||+++.+.+  .|+++.++. .+.. +.......          
T Consensus       200 ~~livD~a~a~~~~~~p-~~------~g~Div~~S~sK~lg~~g~~~~G~l~~~~~-~~~~-l~~~~~~~----------  260 (415)
T 2fq6_A          200 AIIMIDNTWAAGVLFKA-LD------FGIDVSIQAATKYLVGHSDAMIGTAVCNAR-CWEQ-LRENAYLM----------  260 (415)
T ss_dssp             CEEEEECTTTTTTSSCG-GG------GTCSEEEEETTTTTTCSSSCCCEEEEECTT-THHH-HHHHHHHT----------
T ss_pred             CEEEEECCCcccccCCc-cc------cCCeEEEEeCccccCCCCCceEEEEEeCHH-HHHH-HHHHHHhc----------
Confidence            99999999986543222 11      1789999999999987754  577766543 2221 11000000          


Q ss_pred             ccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe-cC----------------
Q 037144          342 EQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA-FP----------------  404 (502)
Q Consensus       342 ~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~-~~----------------  404 (502)
                                   +........|..++.  .+.+..++++..++++.+.+.|++.|.++-+ .+                
T Consensus       261 -------------G~~~~~~~a~~~~~~--l~~l~~r~~~~~~n~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~  325 (415)
T 2fq6_A          261 -------------GQMVDADTAYITSRG--LRTLGVRLRQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFT  325 (415)
T ss_dssp             -------------TCCCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCS
T ss_pred             -------------CCCCCHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCC
Confidence                         001123445555443  4667778888899999999999988776533 22                


Q ss_pred             CCeeEEEEEeec
Q 037144          405 RNFSLVCFRVTP  416 (502)
Q Consensus       405 ~~~~~v~f~~~~  416 (502)
                      ...++++|.+..
T Consensus       326 ~~g~i~sf~l~g  337 (415)
T 2fq6_A          326 GSSGLFSFVLKK  337 (415)
T ss_dssp             CCCSEEEEEESS
T ss_pred             CCceEEEEEECC
Confidence            135688888754

>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*

Probab=99.82  E-value=6.2e-19  Score=179.39  Aligned_cols=298  Identities=11%  Similarity=0.029  Sum_probs=184.9

Q ss_pred             HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144          116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV  195 (502)
Q Consensus       116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~  195 (502)
                      ....++.+++++++|.+         ..++|+||++|+..++.+++.....  +..+ ++.+|+.+...|.+...+++..
T Consensus        82 ~~~~~l~~~la~~~g~~---------~v~~~~gg~~a~~~al~~~~~~~~~--~~~~-~~~vi~~~~~yh~~~~~~~~~~  149 (397)
T 2ord_A           82 RPQMELAELLSKNTFGG---------KVFFANTGTEANEAAIKIARKYGKK--KSEK-KYRILSAHNSFHGRTLGSLTAT  149 (397)
T ss_dssp             HHHHHHHHHHHHTTTSC---------EEEEESSHHHHHHHHHHHHHHHHHH--HCTT-CCEEEEEBTCCCCSSHHHHHHS
T ss_pred             HHHHHHHHHHHHhcCCC---------eEEEeCCHHHHHHHHHHHHHHHhhc--CCCC-CceEEEEcCCcCCCchhhhhcc
Confidence            45556777888888732         5799999999999988877642111  0000 2345555555677777777777


Q ss_pred             CCC---------CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc----cCChhHHHHHHHHh
Q 037144          196 GID---------RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA----VDPLKPLCDVAKQF  262 (502)
Q Consensus       196 Glg---------~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~----idpl~eI~~i~~~~  262 (502)
                      |..         ...++.+|.       .|+++|+++++++      +.+|+++.++|++|.    .+++++|+++|++|
T Consensus       150 g~~~~~~~~~p~~~~~~~~~~-------~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~  216 (397)
T 2ord_A          150 GQPKYQKPFEPLVPGFEYFEF-------NNVEDLRRKMSED------VCAVFLEPIQGESGIVPATKEFLEEARKLCDEY  216 (397)
T ss_dssp             BCHHHHGGGCSCCTTEEEECT-------TCHHHHHHHCCTT------EEEEEECSEECTTTCEECCHHHHHHHHHHHHHH
T ss_pred             CChhhccccCCCCCCeeEecC-------CCHHHHHHHhhcC------eEEEEEecccCCCCcccCCHHHHHHHHHHHHHc
Confidence            761         001666664       2899999988643      458888889999999    38899999999999


Q ss_pred             CCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcc
Q 037144          263 GIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKE  342 (502)
Q Consensus       263 g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~  342 (502)
                      |+++++|++|+++............+. ..|.+++  +|+++.+.+.|++++++.. .  .+...    ...        
T Consensus       217 ~~~li~De~~~~~~~~g~~~~~~~~~~-~~d~~s~--sK~~~~G~r~G~~~~~~~~-~--~l~~~----~~~--------  278 (397)
T 2ord_A          217 DALLVFDEVQCGMGRTGKLFAYQKYGV-VPDVLTT--AKGLGGGVPIGAVIVNERA-N--VLEPG----DHG--------  278 (397)
T ss_dssp             TCEEEEECTTTTTTTTSSSSHHHHHTC-CCSEEEE--CGGGGTTSCCEEEEECSTT-C--CCCTT----SSC--------
T ss_pred             CCEEEEEecccCCccCccchhhhhhCC-CCCeeee--ccccCCCcCeEEEEEchHh-c--ccCCC----CcC--------
Confidence            999999999975422111111001122 3687755  7999977789998886542 1  11110    000        


Q ss_pred             cccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEecCCCeeEEEEEeecCc
Q 037144          343 QEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD----KRFEVAFPRNFSLVCFRVTPSA  418 (502)
Q Consensus       343 ~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~----~~~~l~~~~~~~~v~f~~~~~~  418 (502)
                      .       +. .........+..+++.+..   +++.++..++++++.+.|+++    +.+... ++..++++|.+....
T Consensus       279 ~-------~~-~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~g~~~~~~~~~~~  346 (397)
T 2ord_A          279 T-------TF-GGNPLACRAGVTVIKELTK---EGFLEEVEEKGNYLMKKLQEMKEEYDVVADV-RGMGLMIGIQFREEV  346 (397)
T ss_dssp             C-------SS-TTCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE-EEETTEEEEEECTTS
T ss_pred             C-------CC-CCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHHhCCceEEE-EEEeEEEEEEECChH
Confidence            0       00 0001112233344444332   356777888888888888764    322222 233456667664310


Q ss_pred             chhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144          419 VMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEH  498 (502)
Q Consensus       419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~  498 (502)
                                                  ...++.+.|.++|..+.+.    +..++|+++. ...+++++++++++|+++
T Consensus       347 ----------------------------~~~~l~~~l~~~gi~v~~~----~~~~iRis~~-~~~~~e~i~~~~~~l~~~  393 (397)
T 2ord_A          347 ----------------------------SNREVATKCFENKLLVVPA----GNNTIRFLPP-LTVEYGEIDLAVETLKKV  393 (397)
T ss_dssp             ----------------------------CHHHHHHHHHHTTEECEEE----TTTEEEECCC-TTCCHHHHHHHHHHHHHH
T ss_pred             ----------------------------HHHHHHHHHHHCCCEEccC----CCCEEEEECC-cCCCHHHHHHHHHHHHHH
Confidence                                        0235667777778644332    3468999974 456788999999999988


Q ss_pred             HHh
Q 037144          499 LEA  501 (502)
Q Consensus       499 ~~~  501 (502)
                      .++
T Consensus       394 l~~  396 (397)
T 2ord_A          394 LQG  396 (397)
T ss_dssp             HHT
T ss_pred             Hhh
Confidence            764

>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}

Probab=99.82  E-value=2.1e-19  Score=183.89  Aligned_cols=334  Identities=11%  Similarity=0.051  Sum_probs=194.2

Q ss_pred             HHHHHHHHhhcCCCC-----cccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHH
Q 037144           91 GIVGEMLSSGFNVVG-----LDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVL  165 (502)
Q Consensus        91 ~~~~~~l~~~~n~~~-----~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~  165 (502)
                      ..+.+.+...+..+.     ..|....+..++++.+.+|+.+.+|.+...     ...++|+|+|+|+..++.+.+..  
T Consensus        49 ~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~-----~~i~~t~G~t~al~~~~~~l~~~--  121 (417)
T 3g7q_A           49 DYFQTLLTDMVESGKAADALCNYDGPQGKTALLNALAVLLRETLGWDIEP-----QNIALTNGSQSAFFYLFNLFAGR--  121 (417)
T ss_dssp             HHHHHHHHHHHHHTHHHHHHHSTTCTTSHHHHHHHHHHHHHHHHCCCCCG-----GGEEEESCHHHHHHHHHHHHSBC--
T ss_pred             HHHHHHHHHHhhCCcccceeeccCCCCCcHHHHHHHHHHHHHHhCCCCCc-----ccEEEeCCcHHHHHHHHHHHcCC--
Confidence            445555555543221     246666677899999999999888864321     26899999999998887766431  


Q ss_pred             HHhCccCCCCeEEEeC-CCCchhHHHHHHHc----CCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEe
Q 037144          166 KKIGRENISKLVVYSS-DQTHCAFQKAAQIV----GIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCAT  240 (502)
Q Consensus       166 ~~~~~~~~~~~~v~~s-~~~H~s~~~aa~~~----Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t  240 (502)
                         |.++ .+..|+++ ...|..+...+...    +.+. .+..++.+. .++.+|+++|+  +.+      .+.+|+++
T Consensus       122 ---gd~~-~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~d~~~l~--~~~------~~~~v~~~  187 (417)
T 3g7q_A          122 ---RADG-STKKVLFPLAPEYIGYADSGLEDDLFVSARP-NIELLPEGQ-FKYHVDFEHLH--IGE------ETGMICVS  187 (417)
T ss_dssp             --------CCBEEEESSCCCHHHHHC-----CCEEECCC-EEEEEGGGE-EEEECCGGGCC--CCT------TEEEEEEE
T ss_pred             ---CccC-CcceEEEeCCCccccchhhccchhhhccccC-cccccCCcc-cccccCHHHhc--ccc------CceEEEEC
Confidence               0000 11167776 67777766655322    2210 333444321 13578999988  332      24578888


Q ss_pred             cCCccccccCC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCc
Q 037144          241 VGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDP  317 (502)
Q Consensus       241 ~gtt~~G~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~  317 (502)
                      .++|++|.+-|   +++|+++|++||+++++|++|+...-.. .+..........+.+..+++|++.....+|+++. ++
T Consensus       188 ~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~-~~  265 (417)
T 3g7q_A          188 RPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGI-IFSEARPLWNPNIILCMSLSKLGLPGSRCGIIIA-ND  265 (417)
T ss_dssp             SSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCC-BCSCCCCCCCTTEEEEEESGGGTCTTSCCEEEEC-CH
T ss_pred             CCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCccccccc-cccccccCCCCCEEEEEechhccCCCcceEEEEe-CH
Confidence            99999999988   8999999999999999999997532111 1111111123556778899997655566887665 33


Q ss_pred             hhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh---cH-HHHHH-HHHHHHHHHHHHHHH
Q 037144          318 SCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF---GV-ANLRN-FIRSHVGMAKLFERL  392 (502)
Q Consensus       318 ~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---g~-~g~~~-~~~~~~~la~~l~~~  392 (502)
                      .... .+........                       .....+...++...+   .. +...+ +.+++.++++++.+.
T Consensus       266 ~~~~-~~~~~~~~~~-----------------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (417)
T 3g7q_A          266 KTIT-AIANMNGIIS-----------------------LAPGGMGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQQTIAI  321 (417)
T ss_dssp             HHHH-HHHHHHHHHC-----------------------CCCCSHHHHHHHHHHHTTCHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             HHHH-HHHHhhccee-----------------------eCCCcHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence            3322 2211000000                       001223333333322   11 11222 455566777777777


Q ss_pred             Hhc-CC--CeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC
Q 037144          393 VTS-DK--RFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG  469 (502)
Q Consensus       393 l~~-~~--~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~  469 (502)
                      |++ ++  ++++..+....++++.+.....                           ...++.+.+.+.|..+.++..+.
T Consensus       322 l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~---------------------------~~~~l~~~l~~~gi~v~~g~~f~  374 (417)
T 3g7q_A          322 IRRYLSEERCLIHKPEGAIFLWLWFKDLPI---------------------------TTELLYQRLKARGVLMVPGHYFF  374 (417)
T ss_dssp             HHHHCCTTTCEEECCCBSSEEEEECTTCSS---------------------------CHHHHHHHHHHTTEECEEGGGGC
T ss_pred             HHHhcccCCceeeCCCcceEEEEEcCCCCC---------------------------CHHHHHHHHHHCCEEEECchhhC
Confidence            765 45  4677644334444455532111                           02356667777786554433221


Q ss_pred             -C--------EEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          470 -G--------IYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       470 -g--------~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                       +        ..++|++++.   ++++|+++++.|.++.++
T Consensus       375 ~~~~~~~~~~~~~iRis~~~---~~~~i~~~~~~l~~~l~~  412 (417)
T 3g7q_A          375 PGLDKPWPHTHQCMRMNYVP---EPDKIEAGVKILAEEIER  412 (417)
T ss_dssp             TTBSSCCGGGGGEEEEESCS---CHHHHHHHHHHHHHHHHH
T ss_pred             CCCccccccCCCeEEEEecC---CHHHHHHHHHHHHHHHHH
Confidence             1        4699999863   778999999999988754

>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}

Probab=99.82  E-value=1.3e-18  Score=180.07  Aligned_cols=360  Identities=11%  Similarity=0.023  Sum_probs=213.2

Q ss_pred             CCHHHHHHHHHHhhcCCCCCCCCCcccccCCCCCCHHHHHHHHHHhhc---CCCCcccccChhhHHHHHHHHHHHHHhcC
Q 037144           54 ESVETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGF---NVVGLDWISSPAAVELENIVMDWLGQMLD  130 (502)
Q Consensus        54 ~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~---n~~~~~~~~~p~~~~le~~~~~~l~~l~g  130 (502)
                      .+.-.+.+.+...-.+...+.....|+++...++..+. +.+.+....   +.....|...++..++.+++.+|+   +|
T Consensus        34 ~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~a-v~~a~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l---~g  109 (448)
T 3meb_A           34 DAILNLTVLYNADTNPKKVNLGVGAYRDESGKPWILPA-VKEAEAIISSDLSKYNKEYPPVAGFPLFLEAAQFLM---FG  109 (448)
T ss_dssp             CTTHHHHHHHHHCCCTTCEEESSCCCCCTTSCCCCCHH-HHHHHHHHHHCTTTTCCSCCCTTCCHHHHHHHHHHH---HC
T ss_pred             ChHHHHHHHHHhCCCCCeEEeecccccCCCCCEechHH-HHHHHHHHhhcccCCCCCCCCCcchHHHHHHHHHHh---cC
Confidence            34556666666554344344444455555444344343 344433232   223345655566777887777776   36


Q ss_pred             CCCccCcCCCCcEEE--cCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHH----HcCCCCCCEEE
Q 037144          131 LPKSFLFSGNGGGVI--QGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQ----IVGIDRKNIRA  204 (502)
Q Consensus       131 ~~~~~~~~~~~~g~~--t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~----~~Glg~~~v~~  204 (502)
                      .+...  ......++  |+|||+|+..+.......  .       +++.|+++..+|.++...++    ..|+   +++.
T Consensus       110 ~~~~~--~~~~~i~~~~t~ggt~al~l~~~~~~~~--~-------~gd~Vlv~~p~~~~~~~~~~~~~~~~G~---~v~~  175 (448)
T 3meb_A          110 KDSKA--AQEGRIASCQSLSGTGSLHIGFEFLHLW--M-------PKAEFYMPSTTWPNHYGIYDKVFNKLKV---PYKE  175 (448)
T ss_dssp             TTCHH--HHTTCEEEEEESHHHHHHHHHHHHHHHH--C-------TTCCEEEESSCCTHHHHHHHHHHCTTTS---CCEE
T ss_pred             CCccc--cCcCcEEEEECCcHHHHHHHHHHHHHHh--C-------CCCEEEECCCCCHhHHHHHHhhHHhCCC---eEEE
Confidence            54100  00015788  999999997643322111  1       56788899999999999999    8999   9999


Q ss_pred             Eec-CCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hhHHHHHHHHhCCEEEeecccccccccCc
Q 037144          205 IKT-TKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICP  280 (502)
Q Consensus       205 v~~-~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~  280 (502)
                      +|+ ++++++.+|+++|++++++..   ....+|+.+.++|+||.+-+   +++|+++|++||+++++|.+|+++.....
T Consensus       176 ~~~~~~~~~~~~d~e~l~~~l~~~~---~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~  252 (448)
T 3meb_A          176 YTYLRKDGELEIDFSNTKKDIQSAP---EKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSF  252 (448)
T ss_dssp             ECCBCTTSCSSBCHHHHHHHHHHSC---TTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCH
T ss_pred             EeccccccCCCcCHHHHHHHHHhCC---CCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCc
Confidence            998 542147999999999997521   12457788889999999865   55699999999999999999987654321


Q ss_pred             -----cchhhhcCCCCCC-eeEEccCCcCCCC-CcceEE--Ee--------eCchh---hhhhhcCCcccccCccCCCCC
Q 037144          281 -----EFRHFIDGVECVD-SFSFNPHKWLFTT-LDCCCL--WV--------KDPSC---LLSTLSTNPQYLKNEATDQEP  340 (502)
Q Consensus       281 -----~~~~~~~~~~~aD-si~~~~hK~l~~p-~~~g~~--~~--------r~~~~---l~~~~~~~~~yl~~~~~~~~~  340 (502)
                           ..+.... . ..+ .++.++||.++.| ..+|++  +.        .++..   +...+..   ......     
T Consensus       253 ~~~~~~~~~~~~-~-~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~---~~~~~~-----  322 (448)
T 3meb_A          253 EADAFAVRMFVD-A-GVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTL---QIRKTW-----  322 (448)
T ss_dssp             HHHTHHHHHHHH-T-TCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHHHHHHHHHHHHH---HHHTTT-----
T ss_pred             ccCchhHHHHhh-c-CCcEEEEecccccCCCccccceeeeeeeccccccccCCHHHHHHHHHHHHH---HHhccc-----
Confidence                 0111111 1 233 5577899999744 456776  44        33311   1111110   000000     


Q ss_pred             cccccCCCcccccCCCCCCchHHHHHHHHhcH--------HHHHHHHHHHHHHHHHHHHHHhcC--CC------eEEecC
Q 037144          341 KEQEVGYKDWQITLCRRFRSLKLWVVIRNFGV--------ANLRNFIRSHVGMAKLFERLVTSD--KR------FEVAFP  404 (502)
Q Consensus       341 ~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~--------~g~~~~~~~~~~la~~l~~~l~~~--~~------~~l~~~  404 (502)
                                    + ....+..+++...+..        +.++++.++..+++++|.+.|+++  ++      ++.. .
T Consensus       323 --------------~-~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~-~  386 (448)
T 3meb_A          323 --------------S-MSAIHGAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKRKTPGPGSKGTWDHI-L  386 (448)
T ss_dssp             --------------S-SCCHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSTTTCCCTHH-H
T ss_pred             --------------C-CccHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCccccccee-C
Confidence                          0 0122333333333321        346778888899999999999887  44      4433 2


Q ss_pred             CCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHH-HhcCcEEEEeeeECCEEEEEEEecCCCC
Q 037144          405 RNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESI-NVSGKVFMTHAIVGGIYVLRFAAGNSMT  483 (502)
Q Consensus       405 ~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~g~~~~~~~~~~g~~~lR~~~~~~~t  483 (502)
                      ++.++++|.-.+                            .    ++.+.+ .+.|.. +.++.      .|++++.. +
T Consensus       387 ~~~g~~~~~~~~----------------------------~----~~~~~ll~~~gV~-v~~G~------gRis~a~~-~  426 (448)
T 3meb_A          387 TAIGMFTFTGLT----------------------------P----EHVDYLKEKWSIY-LVKAG------GRMSMCGL-T  426 (448)
T ss_dssp             HCCSSEEECCCC----------------------------H----HHHHHHHHHHCEE-ECSGG------GEEEGGGC-C
T ss_pred             CCceEEEecCCC----------------------------H----HHHHHHHHhCCEE-EeCCC------cEEEEecC-C
Confidence            344455542111                            1    223333 234654 44422      29998632 4


Q ss_pred             cHHHHHHHHHHHHHHHHh
Q 037144          484 MESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       484 ~~~di~~~~~~l~~~~~~  501 (502)
                      + ++|++++++|.++.++
T Consensus       427 ~-~~i~~~~~~l~~~l~~  443 (448)
T 3meb_A          427 E-SNCDYVAEAIHDAVTK  443 (448)
T ss_dssp             T-TTHHHHHHHHHHHHHH
T ss_pred             H-HHHHHHHHHHHHHHHh
Confidence            4 4699999999988764

>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*

Probab=99.82  E-value=6.6e-18  Score=173.36  Aligned_cols=316  Identities=10%  Similarity=0.046  Sum_probs=182.7

Q ss_pred             HHHHHHHHHHhc-CCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcC
Q 037144          118 ENIVMDWLGQML-DLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVG  196 (502)
Q Consensus       118 e~~~~~~l~~l~-g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~G  196 (502)
                      ..++.+.+++++ | +...      .+++|+||++|+..++..++.. .+       ++.+|+.+...|.+...++...|
T Consensus        86 ~~~l~~~la~~~~~-~~~~------~v~~~~g~~~a~~~~~~~a~~~-~~-------~~~vi~~~p~y~~~~~~~~~~~g  150 (426)
T 1sff_A           86 YLELCEIMNQKVPG-DFAK------KTLLVTTGSEAVENAVKIARAA-TK-------RSGTIAFSGAYHGRTHYTLALTG  150 (426)
T ss_dssp             HHHHHHHHHHHSSC-SSCE------EEEEESSHHHHHHHHHHHHHHH-HT-------CCEEEEETTCCCCSSHHHHHHSS
T ss_pred             HHHHHHHHHHhCCc-cccc------EEEEeCchHHHHHHHHHHHHHh-hC-------CCeEEEECCCcCCCchHhhhhcC
Confidence            334556677777 4 2211      5899999999999888865432 11       44455555556666666777766


Q ss_pred             CC----------CCCEEEEecCC---CCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHHH
Q 037144          197 ID----------RKNIRAIKTTK---SSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDVA  259 (502)
Q Consensus       197 lg----------~~~v~~v~~~~---~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~  259 (502)
                      ..          ...++.+|++.   +.++.+|+++|++++++.. .+..+.+|+++...+++|.+.+    +++|.++|
T Consensus       151 ~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~-~~~~~~~v~~~p~~~ntG~~~~~~~~l~~l~~l~  229 (426)
T 1sff_A          151 KVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDA-APEDIAAIVIEPVQGEGGFYASSPAFMQRLRALC  229 (426)
T ss_dssp             CCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTC-CGGGEEEEEECSBCTTTTSCBCCHHHHHHHHHHH
T ss_pred             CccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhcc-CCCceEEEEEecccCCCCcccCCHHHHHHHHHHH
Confidence            51          01277788753   1134689999999997421 0112446666543334997777    99999999


Q ss_pred             HHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCC
Q 037144          260 KQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQE  339 (502)
Q Consensus       260 ~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~  339 (502)
                      ++||+++++|++|+++....+.......++ .+|.+  +++|+++.+..+|++++++. .. +.+... .+..       
T Consensus       230 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~-~~di~--s~sK~~~~GlriG~~~~~~~-~~-~~l~~~-~~~~-------  296 (426)
T 1sff_A          230 DEHGIMLIADEVQSGAGRTGTLFAMEQMGV-APDLT--TFAKSIAGGFPLAGVTGRAE-VM-DAVAPG-GLGG-------  296 (426)
T ss_dssp             HHHTCEEEEECTTTTTTTTSSSSGGGGTTS-CCSEE--EECGGGGTSSCCEEEEEEHH-HH-TTSCTT-SBCC-------
T ss_pred             HHcCCEEEEechhhccCcccchhhhhhcCC-CCCEE--EEcccccCCCceEEEEEcHH-HH-hhhccC-CcCc-------
Confidence            999999999999986432111110001111 36766  55699986555799888643 22 222110 0000       


Q ss_pred             CcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEecCCCeeEEEEEee
Q 037144          340 PKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTS----DKRFEVAFPRNFSLVCFRVT  415 (502)
Q Consensus       340 ~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~----~~~~~l~~~~~~~~v~f~~~  415 (502)
                                 +. .........+.++++.+..+   +..++..++++++++.|++    .+.+... ++..+++++.+.
T Consensus       297 -----------~~-~~~~~~~~a~~aal~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~  360 (426)
T 1sff_A          297 -----------TY-AGNPIACVAALEVLKVFEQE---NLLQKANDLGQKLKDGLLAIAEKHPEIGDV-RGLGAMIAIELF  360 (426)
T ss_dssp             -----------SS-SSCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHHTCTTEEEE-EEETTEEEEEEB
T ss_pred             -----------CC-CCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EEEEEEEEEEEe
Confidence                       00 00011222334444544322   3556677788888887765    4444333 233556777664


Q ss_pred             cCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHH
Q 037144          416 PSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVV  495 (502)
Q Consensus       416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l  495 (502)
                      +....                 . ...  .....++.++|.++|.++.++..  ...++|+++. ..+++++++++++.|
T Consensus       361 ~~~~~-----------------~-~~~--~~~~~~l~~~l~~~gi~v~~~~~--~~~~iRi~~~-~~~~~~~i~~~~~~l  417 (426)
T 1sff_A          361 EDGDH-----------------N-KPD--AKLTAEIVARARDKGLILLSCGP--YYNVLRILVP-LTIEDAQIRQGLEII  417 (426)
T ss_dssp             GGGCT-----------------T-SBC--HHHHHHHHHHHHHTTEECEEEST--TSCEEEECCC-TTCCHHHHHHHHHHH
T ss_pred             cCccc-----------------c-CCC--hHHHHHHHHHHHHCCcEEecCCC--CCCEEEEECC-ccCCHHHHHHHHHHH
Confidence            21000                 0 000  12235677778778865443322  2468999974 456788999999999


Q ss_pred             HHHHHh
Q 037144          496 QEHLEA  501 (502)
Q Consensus       496 ~~~~~~  501 (502)
                      +++.++
T Consensus       418 ~~~l~~  423 (426)
T 1sff_A          418 SQCFDE  423 (426)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            987654

>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}

Probab=99.82  E-value=7e-19  Score=177.42  Aligned_cols=287  Identities=11%  Similarity=0.046  Sum_probs=176.7

Q ss_pred             HHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCC-eEEEeCCCC-chhHHHHHHHcC
Q 037144          119 NIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISK-LVVYSSDQT-HCAFQKAAQIVG  196 (502)
Q Consensus       119 ~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~-~~v~~s~~~-H~s~~~aa~~~G  196 (502)
                      .++.+++++++|.+ +       .+++|+||++|+..++.+++.. ..+ +   .++ +.|+++..+ |.+...+....|
T Consensus        73 ~~l~~~la~~~g~~-~-------~v~~~~g~t~a~~~~~~~~~~~-~~~-~---~~g~~~vl~~~~~y~~~~~~~~~~~~  139 (375)
T 2eh6_A           73 EELAHKLVKHFWTE-G-------KVFFANSGTESVEAAIKLARKY-WRD-K---GKNKWKFISFENSFHGRTYGSLSATG  139 (375)
T ss_dssp             HHHHHHHHHTSSSC-E-------EEEEESSHHHHHHHHHHHHHHH-HHH-T---TCCCCEEEEEBTCCCCSSHHHHHHCB
T ss_pred             HHHHHHHHhhcCCC-C-------eEEEeCchHHHHHHHHHHHHHH-hcc-C---CCCCCEEEEECCCcCCCchhhhhhcC
Confidence            35567788888885 3       5899999999999888765422 100 0   033 566666666 444444444333


Q ss_pred             C-----CCC----CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHHHHHhC
Q 037144          197 I-----DRK----NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDVAKQFG  263 (502)
Q Consensus       197 l-----g~~----~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~~~~g  263 (502)
                      .     |..    .+..+|.       +|+++|+++++++      +.+|+++.+++++|.+.|    +++|+++|++||
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~------~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~  206 (375)
T 2eh6_A          140 QPKFHKGFEPLVPGFSYAKL-------NDIDSVYKLLDEE------TAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKD  206 (375)
T ss_dssp             CGGGTTTTCSCCSSEEEECT-------TCHHHHHTTCCTT------EEEEEECSEETTTTSEECCHHHHHHHHHHHHHHT
T ss_pred             CccccCCCCCCCCCceeCCC-------chHHHHHHHhcCC------eEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhC
Confidence            2     000    1333332       5899999888643      447888889999999977    999999999999


Q ss_pred             CEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCccc
Q 037144          264 IWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQ  343 (502)
Q Consensus       264 ~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~  343 (502)
                      +++++|++|+++............+. ..|+++++  |+++.+.++|++++++. . .+.+... .+..           
T Consensus       207 ~~li~De~~~~~~~~~~~~~~~~~~~-~~d~~s~S--K~~~~g~~~G~~~~~~~-~-~~~~~~~-~~~~-----------  269 (375)
T 2eh6_A          207 VLLIIDEVQTGIGRTGEFYAYQHFNL-KPDVIALA--KGLGGGVPIGAILAREE-V-AQSFTPG-SHGS-----------  269 (375)
T ss_dssp             CEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGGTTSCCEEEEEEHH-H-HTTCCTT-SCCC-----------
T ss_pred             CEEEEeccccCCCCCCcchhhhhcCC-CCCEEEEc--ccccCCCCeEEEEEcHH-H-HhhhcCC-CCCC-----------
Confidence            99999999985322111110001111 37888766  99988888999998653 2 2222110 0000           


Q ss_pred             ccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhh
Q 037144          344 EVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKL  423 (502)
Q Consensus       344 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~  423 (502)
                             +.    ....+...++...+..  +.+..++..++++++.+.|++++...+  ++..+++++.+...      
T Consensus       270 -------~~----~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~--~~~g~~~~~~~~~~------  328 (375)
T 2eh6_A          270 -------TF----GGNPLACRAGTVVVDE--VEKLLPHVREVGNYFKEKLKELGKGKV--KGRGLMLGLELERE------  328 (375)
T ss_dssp             -------SS----TTCHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHTTSSEE--EEETTEEEEECSSC------
T ss_pred             -------CC----CCCHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhcCCc--eEEEEEEEEEEcCc------
Confidence                   00    0123333333332211  126778888999999999988754222  23345666655321      


Q ss_pred             hhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144          424 RTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEH  498 (502)
Q Consensus       424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~  498 (502)
                                              ..++.+.+.++|..+...    +..++|++++ ..+++++++++++.|+++
T Consensus       329 ------------------------~~~~~~~l~~~gi~~~~~----~~~~iRi~~~-~~~~~~~i~~~~~~l~~~  374 (375)
T 2eh6_A          329 ------------------------CKDYVLKALEKGLLINCT----AGKVLRFLPP-LIIQKEHIDRAISVLREI  374 (375)
T ss_dssp             ------------------------CHHHHHHHHHTTEECEEE----TTTEEEECCC-TTCCHHHHHHHHHHHHHH
T ss_pred             ------------------------HHHHHHHHHHCCCEEecC----CCCEEEEECC-CCCCHHHHHHHHHHHHHh
Confidence                                    134566666678643322    3468999975 456788999999999875

>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3

Probab=99.82  E-value=2.3e-19  Score=182.53  Aligned_cols=282  Identities=11%  Similarity=0.111  Sum_probs=183.1

Q ss_pred             HHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHH----HHHH
Q 037144          119 NIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQK----AAQI  194 (502)
Q Consensus       119 ~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~----aa~~  194 (502)
                      .++.+.+++++|.+.         .+++++||+|+..++. ...           +++.|+++...|.+...    .++.
T Consensus        58 ~~lr~~la~~~g~~~---------~i~~~sGt~a~~~al~-~~~-----------~gd~Vi~~~~~y~~~~~~~~~~~~~  116 (393)
T 1n8p_A           58 ENLERAVAALENAQY---------GLAFSSGSATTATILQ-SLP-----------QGSHAVSIGDVYGGTHRYFTKVANA  116 (393)
T ss_dssp             HHHHHHHHHHTTCSE---------EEEESCHHHHHHHHHH-TSC-----------SSCEEEEESSCCHHHHHHHHHTSTT
T ss_pred             HHHHHHHHHHhCCCc---------EEEECChHHHHHHHHH-HcC-----------CCCEEEEeCCCchHHHHHHHHHHHH
Confidence            345566788888752         4666667999987776 321           56778888888875544    3455


Q ss_pred             cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh----CCEEEeec
Q 037144          195 VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF----GIWVHVDA  270 (502)
Q Consensus       195 ~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~----g~~lhVDa  270 (502)
                      .|+   +++.+|++       | ++|+++|+++      +.+|+++.++|++|.+.|+++|+++|+++    |+++|+|+
T Consensus       117 ~G~---~v~~v~~~-------d-~~l~~~i~~~------t~lv~~~~~~nptG~~~~l~~i~~la~~~~~~~~~~livD~  179 (393)
T 1n8p_A          117 HGV---ETSFTNDL-------L-NDLPQLIKEN------TKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDN  179 (393)
T ss_dssp             TCS---CCEEESSH-------H-HHHHHHSCSS------EEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEEC
T ss_pred             cCc---EEEEeCCC-------h-HHHHHhcccC------ceEEEEECCCCCcceecCHHHHHHHHHHhCCCCCCEEEEeC
Confidence            677   89998863       6 8888887543      34888899999999999999999999999    99999999


Q ss_pred             ccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-cc-eEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCC
Q 037144          271 AYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-DC-CCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYK  348 (502)
Q Consensus       271 A~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~-g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~  348 (502)
                      +|+.+...  .....     ++|.++.++||+++.+. .. |+++.+++.......... ...                 
T Consensus       180 a~~~~~~~--~~~~~-----~~di~~~S~sK~~g~~G~rigG~~~~~~~~~~~~l~~~~-~~~-----------------  234 (393)
T 1n8p_A          180 TFLSPYIS--NPLNF-----GADIVVHSATKYINGHSDVVLGVLATNNKPLYERLQFLQ-NAI-----------------  234 (393)
T ss_dssp             TTTHHHHC--CGGGG-----TCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHH-HHH-----------------
T ss_pred             CccccccC--CHHHc-----CCeEEEEECcccccCCCCceeEEEEeCCHHHHHHHHHHH-Hhc-----------------
Confidence            99877653  11111     68999999999987553 14 777665554332211000 000                 


Q ss_pred             cccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC-eEEe-cC-----C------------C-ee
Q 037144          349 DWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKR-FEVA-FP-----R------------N-FS  408 (502)
Q Consensus       349 ~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~-~~l~-~~-----~------------~-~~  408 (502)
                            +.....+..|.+++.+  +.+..++++..++++.+.+.|++.+. +.-+ .+     +            . .+
T Consensus       235 ------g~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~  306 (393)
T 1n8p_A          235 ------GAIPSPFDAWLTHRGL--KTLHLRVRQAALSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGG  306 (393)
T ss_dssp             ------CCCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCS
T ss_pred             ------CCCCCHHHHHHHHhcc--chHHHHHHHHHHHHHHHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCCCCCcc
Confidence                  0011334455544433  44566777788888999999988766 5432 12     1            2 56


Q ss_pred             EEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcE---------EEEee--eE---------
Q 037144          409 LVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKV---------FMTHA--IV---------  468 (502)
Q Consensus       409 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~---------~~~~~--~~---------  468 (502)
                      +++|.+.+.                           ......+.+.+...+..         ...+.  ..         
T Consensus       307 i~~~~l~~~---------------------------~~~~~~~l~~l~~~~~~~s~G~~~s~~~~p~~~~h~~~~~~~~~  359 (393)
T 1n8p_A          307 MISFRIKGG---------------------------AEAASKFASSTRLFTLAESLGGIESLLEVPAVMTHGGIPKEARE  359 (393)
T ss_dssp             EEEEEESSC---------------------------HHHHHHHHHHCSSSEECSCCCCSSCEEECTTTTTSCSSCTTTTT
T ss_pred             EEEEEeCCc---------------------------HHHHHHHHhhCCcceECCCCCCCcceeeccccccccccCHHHHH
Confidence            788877532                           11234555555322211         01110  00         


Q ss_pred             -CC--EEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144          469 -GG--IYVLRFAAGNSMTMESHVRAAWTVVQEHL  499 (502)
Q Consensus       469 -~g--~~~lR~~~~~~~t~~~di~~~~~~l~~~~  499 (502)
                       .|  ...+|+|++ ..+++++|+.+.++|+++.
T Consensus       360 ~~g~~~~~iRlS~g-~~~~~~~i~~l~~al~~~~  392 (393)
T 1n8p_A          360 ASGVFDDLVRISVG-IEDTDDLLEDIKQALKQAT  392 (393)
T ss_dssp             TTSCCTTEEEEECC-SSCHHHHHHHHHHHHHHHH
T ss_pred             hcCCCCCeEEEEEc-cCCHHHHHHHHHHHHHHhh
Confidence             12  368999986 5577889999999998764

>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}

Probab=99.82  E-value=7.8e-19  Score=180.23  Aligned_cols=310  Identities=10%  Similarity=0.013  Sum_probs=188.6

Q ss_pred             cc-ccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHH--HHHHHHHHHHHHHhCccCCC--------C
Q 037144          107 DW-ISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALL--CTLTAARDRVLKKIGRENIS--------K  175 (502)
Q Consensus       107 ~~-~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~--~al~~a~~~~~~~~~~~~~~--------~  175 (502)
                      .| ...++..++++.    ++++++++.+       ..++|+|+++++.  .++.+....      ..  +        +
T Consensus        64 ~Yp~~~~g~~~lr~~----ia~~~~~~~~-------~i~~t~G~~~al~~~~~~~~l~~~------~~--g~~~~~~~~g  124 (423)
T 3ez1_A           64 NYPGGVAGLPSARAL----FAGYLDVKAE-------NVLVWNNSSLELQGLVLTFALLHG------VR--GSTGPWLSQT  124 (423)
T ss_dssp             SSCSCTTCCHHHHHH----HHHHTTSCGG-------GEEECSSCHHHHHHHHHHHHHHTC------CT--TCSSCGGGGC
T ss_pred             CCCCCCCChHHHHHH----HHHHhCCChh-------hEEEeCCcHHHHHHHHHHHHHhcc------CC--CccccccCCC
Confidence            34 444445555555    5556677654       6899999999986  555544320      00  1        4


Q ss_pred             eEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEE-ecCCccccccCChh-
Q 037144          176 LVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCA-TVGTTAITAVDPLK-  253 (502)
Q Consensus       176 ~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~-t~gtt~~G~idpl~-  253 (502)
                      +.|++...+|..+...++..|.   +++.+|++.+   .+|+++|++++++.    ..+.+|++ ..++|+||.+-|.+ 
T Consensus       125 d~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~---g~d~~~l~~~l~~~----~~~~~v~~~~~~~NPtG~~~~~~~  194 (423)
T 3ez1_A          125 PKMIVTVPGYDRHFLLLQTLGF---ELLTVDMQSD---GPDVDAVERLAGTD----PSVKGILFVPTYSNPGGETISLEK  194 (423)
T ss_dssp             CEEEEEESCCHHHHHHHHHHTC---EEEEEEEETT---EECHHHHHHHHHSC----TTEEEEEECSSSCTTTCCCCCHHH
T ss_pred             CEEEEcCCCcHHHHHHHHHcCC---EEEeccCCCC---CCCHHHHHHHHhhC----CCceEEEECCCCCCCCCcCCCHHH
Confidence            7888999999999999999999   9999999752   49999999999521    12345654 47899999998877 


Q ss_pred             --HHHHHH-HHhCCEEEeecccccccccC-c-----cchhhh--cCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhh
Q 037144          254 --PLCDVA-KQFGIWVHVDAAYAGSACIC-P-----EFRHFI--DGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLS  322 (502)
Q Consensus       254 --eI~~i~-~~~g~~lhVDaA~g~~~~~~-~-----~~~~~~--~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~  322 (502)
                        +|+++| ++||+++++|++|+...+.. .     ......  .+....+.+..+++|+++.+.+.|+++.++ .... 
T Consensus       195 l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~~-~~~~-  272 (423)
T 3ez1_A          195 ARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSKITFAGAGLGFVASSE-DNIR-  272 (423)
T ss_dssp             HHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTTTSCSSSSCEEEEECH-HHHH-
T ss_pred             HHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEEEeCchhhccCCcceEEEEeCH-HHHH-
Confidence              888888 89999999999997533222 1     111110  012245577889999877777888877653 3222 


Q ss_pred             hhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcH------HHHHHHHHHHHHHHHHH----HHH
Q 037144          323 TLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGV------ANLRNFIRSHVGMAKLF----ERL  392 (502)
Q Consensus       323 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~------~g~~~~~~~~~~la~~l----~~~  392 (502)
                      .+.....+..                       .....+..+++...+..      +.+.+..+.+.+..+.+    .+.
T Consensus       273 ~~~~~~~~~~-----------------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~  329 (423)
T 3ez1_A          273 WLSKYLGAQS-----------------------IGPNKVEQARHVKFLTEYPGGLEGLMRDHAAIIAPKFRAVDEVLRAE  329 (423)
T ss_dssp             HHHHHHHHSC-----------------------SCCCHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhhhc-----------------------cCCCHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            2211000000                       00122333333333222      23334444444444444    444


Q ss_pred             HhcCC-CeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeee-E--
Q 037144          393 VTSDK-RFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAI-V--  468 (502)
Q Consensus       393 l~~~~-~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~--  468 (502)
                      +.+++ ++++..+....++.+.+....                             ...+.+.+.+.|..+.+.+. +  
T Consensus       330 l~~~~~~~~~~~p~~g~~~~~~~~~~~-----------------------------~~~~~~~l~~~gv~v~~~g~~~~~  380 (423)
T 3ez1_A          330 LGEGGEYATWTLPKGGYFISLDTAEPV-----------------------------ADRVVKLAEAAGVSLTPAGATYPA  380 (423)
T ss_dssp             HTTTTSSEEECCCSBSSCEEEEESSSC-----------------------------HHHHHHHHHHTTEECCCTTTTSST
T ss_pred             cCcCCCceEEeCCCccEEEEEECCCCc-----------------------------HHHHHHHHHHCCcEEecCcccccC
Confidence            44454 477664444445556554311                             23556667777865444121 1  


Q ss_pred             ---CCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          469 ---GGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       469 ---~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                         .+..++|++++..  ++++|+++++.|.++.++
T Consensus       381 ~~~~~~~~iRis~~~~--~~~~i~~~~~~l~~~l~~  414 (423)
T 3ez1_A          381 GQDPHNRNLRLAPTRP--PVEEVRTAMQVVAACIRL  414 (423)
T ss_dssp             TCCSSSCEEEECCSSS--CHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCeEEEEcCCC--CHHHHHHHHHHHHHHHHH
Confidence               2357999998533  677999999999887653

>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*

Probab=99.82  E-value=2.4e-19  Score=182.76  Aligned_cols=304  Identities=13%  Similarity=0.032  Sum_probs=184.2

Q ss_pred             ccccChhhHHHHHHHHHHHHHhcC-CCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCc
Q 037144          107 DWISSPAAVELENIVMDWLGQMLD-LPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTH  185 (502)
Q Consensus       107 ~~~~~p~~~~le~~~~~~l~~l~g-~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H  185 (502)
                      .|...++..++++.+.+++.  +| .+.+       ..++|+|+++++..++ ....           +++.|++...+|
T Consensus        70 ~y~~~~g~~~lr~~la~~l~--~g~~~~~-------~v~~~~G~~~al~~~~-~~~~-----------~gd~Vl~~~p~y  128 (400)
T 3asa_A           70 GYGPDFGLPALRQKLSEDFY--RGFVDAK-------EIFISDGAKVDLFRLL-SFFG-----------PNQTVAIQDPSY  128 (400)
T ss_dssp             CCCCTTCCHHHHHHHHHTTS--TTSSCGG-------GEEEESCHHHHHHHHH-HHHC-----------SSCEEEEEESCC
T ss_pred             CCCCCCCCHHHHHHHHHHHH--cCCCCHH-------HEEEccChHHHHHHHH-HHcC-----------CCCEEEECCCCc
Confidence            45444556777776665543  56 4433       6899999998886533 2211           567788888899


Q ss_pred             hhHHHHHHHcCCCCCC-EEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hhHHHHHHHH
Q 037144          186 CAFQKAAQIVGIDRKN-IRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LKPLCDVAKQ  261 (502)
Q Consensus       186 ~s~~~aa~~~Glg~~~-v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~eI~~i~~~  261 (502)
                      .++..+++..|.   + ++.+|+++++.+..|++   +.        ..+.+|+++.++|++|.+-|   +++|+++|++
T Consensus       129 ~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~l~---~~--------~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~  194 (400)
T 3asa_A          129 PAYLDIARLTGA---KEIIALPCLQENAFFPEFP---ED--------THIDILCLCSPNNPTGTVLNKDQLRAIVHYAIE  194 (400)
T ss_dssp             HHHHHHHHHTTC---SEEEEEECCGGGTTCCCCC---TT--------CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCC---cceEecccchhcCcccChh---hc--------cCccEEEEeCCCCCCCCcCCHHHHHHHHHHHHH
Confidence            999999999998   8 99999875333344432   11        12346777789999999976   6678899999


Q ss_pred             hCCEEEeecccccccccCccchhhhcCCC---CCCeeEEccCCcCC-CCCcceEEEeeCchh------hhhhhcCCcccc
Q 037144          262 FGIWVHVDAAYAGSACICPEFRHFIDGVE---CVDSFSFNPHKWLF-TTLDCCCLWVKDPSC------LLSTLSTNPQYL  331 (502)
Q Consensus       262 ~g~~lhVDaA~g~~~~~~~~~~~~~~~~~---~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~------l~~~~~~~~~yl  331 (502)
                      +|+++++|++|+.+.... .....+..+.   ..+.+..+++|+++ ....+|++++++...      +.......... 
T Consensus       195 ~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG~~~~~~~~~~~~~~~~~~~~~~~~~~-  272 (400)
T 3asa_A          195 HEILILFDAAYSTFISDP-SLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGWTVIPQELTYADGHFVIQDWERFLST-  272 (400)
T ss_dssp             TTCEEEEECTTGGGCCCT-TSCSSGGGSTTGGGTEEEEEECCGGGTTTTCCCEEEECCTTCBCTTSCBHHHHHHHHHHH-
T ss_pred             cCCEEEEEchhhhhhcCC-CCCCchhhCCCCCCceEEEecchhhcCCcchheeEEeeChhhccchhhhHHHHHHHHhcc-
Confidence            999999999998654321 1001111121   23467889999997 444578888755431      11111000000 


Q ss_pred             cCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEE
Q 037144          332 KNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVC  411 (502)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~  411 (502)
                                         +. .  ....+...++...+....++++.++..++++++.+.|++. ++++..+...++++
T Consensus       273 -------------------~~-~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~  329 (400)
T 3asa_A          273 -------------------TF-N--GASIPAQEAGVAGLSILPQLEAIHYYRENSDLLRKALLAT-GFEVFGGEHAPYLW  329 (400)
T ss_dssp             -------------------HC-C--CCCHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHT-TCEEEECSSSSEEE
T ss_pred             -------------------Cc-c--CCChHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHC-CCeeeCCCCceEEE
Confidence                               00 0  0022333333333321146677888889999999999987 78887544455666


Q ss_pred             EE-eecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcEEEEeeeEC--CEEEEEEEecCCCCcHHH
Q 037144          412 FR-VTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKVFMTHAIVG--GIYVLRFAAGNSMTMESH  487 (502)
Q Consensus       412 f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~--g~~~lR~~~~~~~t~~~d  487 (502)
                      +. .+ ...                    +       ..++.+++.++ |..+.++..+.  +..++|+++.   +++++
T Consensus       330 ~~~~~-~~~--------------------~-------~~~~~~~l~~~~gv~v~~g~~f~~~~~~~iRis~~---~~~e~  378 (400)
T 3asa_A          330 VKPTQ-ANI--------------------S-------DRDLFDFFLREYHIAITPGIGFGRSGSGFVRFSSL---GKRED  378 (400)
T ss_dssp             EECCC-TTC--------------------C-------TTTHHHHHHHHHSEECEEGGGGCGGGTTCEEEECC---SCHHH
T ss_pred             EeccC-CCC--------------------C-------HHHHHHHHHHhCCEEEeChhHhCCCCCCEEEEEee---CCHHH
Confidence            66 43 211                    0       11345555543 76544332222  3468999942   56789


Q ss_pred             HHHHHHHHHHHHHh
Q 037144          488 VRAAWTVVQEHLEA  501 (502)
Q Consensus       488 i~~~~~~l~~~~~~  501 (502)
                      ++++++.|+++.++
T Consensus       379 i~~~l~~l~~~~~~  392 (400)
T 3asa_A          379 ILAACERLQMAPAL  392 (400)
T ss_dssp             HHHHHHHHHC----
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999887654

>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}

Probab=99.82  E-value=9.4e-19  Score=179.93  Aligned_cols=315  Identities=10%  Similarity=-0.018  Sum_probs=192.0

Q ss_pred             ccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHH--HHHHHHHHHHHHHh---CccCCCCeEEEeC
Q 037144          107 DWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALL--CTLTAARDRVLKKI---GRENISKLVVYSS  181 (502)
Q Consensus       107 ~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~--~al~~a~~~~~~~~---~~~~~~~~~v~~s  181 (502)
                      .|....+..++++.+.++    ++++.+       ..++|+|+++++.  .++.+..+..  ..   .+...+++.|++.
T Consensus        73 ~Y~~~~g~~~lr~~ia~~----~~~~~~-------~i~~t~G~~~al~~~~~~~~l~~~~--~g~~~~~~~~~gd~V~v~  139 (427)
T 3ppl_A           73 NYGGLDGIVDIRQIWADL----LGVPVE-------QVLAGDASSLNIMFDVISWSYIFGN--NDSVQPWSKEETVKWICP  139 (427)
T ss_dssp             SSCCSSCCHHHHHHHHHH----HTSCGG-------GEEECSSCHHHHHHHHHHHHHHHCC--TTCSSCGGGSSCCEEEEE
T ss_pred             CCCCCCCcHHHHHHHHHH----hCCCcc-------eEEEeCCcHHHHHHHHHHHHHhccC--CcccccccCCCCCEEEEc
Confidence            454444556666665544    477654       6899999999984  4444433200  00   0000016788899


Q ss_pred             CCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEe-cCCccccccCChh---HHHH
Q 037144          182 DQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCAT-VGTTAITAVDPLK---PLCD  257 (502)
Q Consensus       182 ~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t-~gtt~~G~idpl~---eI~~  257 (502)
                      ..+|.++...++..|.   +++.+|++.  + .+|+++|+++++..     .+.+|+++ .++|+||.+-|.+   +|++
T Consensus       140 ~p~y~~~~~~~~~~g~---~~~~v~~~~--~-g~d~~~l~~~l~~~-----~~~~v~~~p~~~NPtG~~~~~~~~~~l~~  208 (427)
T 3ppl_A          140 VPGYDRHFSITERFGF---EMISVPMNE--D-GPDMDAVEELVKNP-----QVKGMWVVPVFSNPTGFTVTEDVAKRLSA  208 (427)
T ss_dssp             ESCCHHHHHHHHHTTC---EEEEEEEET--T-EECHHHHHHHTTST-----TEEEEEECCSSCTTTCCCCCHHHHHHHHH
T ss_pred             CCCcHHHHHHHHHcCC---EEEEeCCCC--C-CCCHHHHHHHHhcC-----CCeEEEECCCCCCCCCccCCHHHHHHHHH
Confidence            9999999999999999   999999985  2 39999999998421     13356555 7899999998877   8888


Q ss_pred             HH-HHhCCEEEeecccccccccCcc-----chhhh--cCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcc
Q 037144          258 VA-KQFGIWVHVDAAYAGSACICPE-----FRHFI--DGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQ  329 (502)
Q Consensus       258 i~-~~~g~~lhVDaA~g~~~~~~~~-----~~~~~--~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~  329 (502)
                      +| ++||+++|+|.+|+...+....     .....  .+..+.+.+..+++|+++.+.++|+++.. +.... .+.....
T Consensus       209 ~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G~r~G~~~~~-~~l~~-~~~~~~~  286 (427)
T 3ppl_A          209 METAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKITLAGAGVSFFLTS-AENRK-WYTGHAG  286 (427)
T ss_dssp             CCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTTSCTTSSCEEEECC-HHHHH-HHHHHHH
T ss_pred             HHhhcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEechhhccCcCccEEEEEcC-HHHHH-HHHHHhh
Confidence            88 9999999999999875432211     11110  11234567788999997666778877664 33222 2211100


Q ss_pred             cccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcH-----HHHHHHHHHHHHHHHHHHHHHh----cCCCeE
Q 037144          330 YLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGV-----ANLRNFIRSHVGMAKLFERLVT----SDKRFE  400 (502)
Q Consensus       330 yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~-----~g~~~~~~~~~~la~~l~~~l~----~~~~~~  400 (502)
                      +..                       .....+..+++...+..     +.+.+..+.+.++.+++.+.|.    .+++++
T Consensus       287 ~~~-----------------------~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~  343 (427)
T 3ppl_A          287 IRG-----------------------IGPNKVNQLAHARYFGDAEGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQ  343 (427)
T ss_dssp             HHC-----------------------SCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCE
T ss_pred             ccc-----------------------CCCCHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceE
Confidence            000                       01123333444444322     2344455555555555655553    344577


Q ss_pred             EecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeee-E-----CCEEEE
Q 037144          401 VAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAI-V-----GGIYVL  474 (502)
Q Consensus       401 l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~-----~g~~~l  474 (502)
                      +..+....++++.+....                             ..++.+.+.+.|..+.++.. +     .+..++
T Consensus       344 ~~~p~~g~~~~~~~~~~~-----------------------------~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~~  394 (427)
T 3ppl_A          344 WTVPAGGYFISLDVVPGT-----------------------------ASRVAELAKEAGIALTGAGSSYPLRQDPENKNL  394 (427)
T ss_dssp             ECCCSBSSCEEEECSTTC-----------------------------HHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEE
T ss_pred             EeCCCccEEEEEECCcch-----------------------------HHHHHHHHHHCCCEEecCcCcCCCCCCCCCCeE
Confidence            654444445555553210                             23556667777865444121 1     246799


Q ss_pred             EEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          475 RFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       475 R~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      |++++..  ++++|+++++.|.++.++
T Consensus       395 Ris~~~~--~~~~i~~~~~~l~~~l~~  419 (427)
T 3ppl_A          395 RLAPSLP--PVEELEVAMDGVATCVLL  419 (427)
T ss_dssp             EECCSSS--CHHHHHHHHHHHHHHHHH
T ss_pred             EEECCCC--CHHHHHHHHHHHHHHHHH
Confidence            9998533  677999999999887653

>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*

Probab=99.81  E-value=5.8e-19  Score=179.30  Aligned_cols=322  Identities=12%  Similarity=0.035  Sum_probs=198.4

Q ss_pred             HHHHHHHHhhcCC-CCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEE--cCCchHHHHHHHHHHHHHHHHH
Q 037144           91 GIVGEMLSSGFNV-VGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVI--QGTTCEALLCTLTAARDRVLKK  167 (502)
Q Consensus        91 ~~~~~~l~~~~n~-~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~--t~ggt~a~~~al~~a~~~~~~~  167 (502)
                      ..+.+.+...+.. ....|....+..++++.+.+++... +.+.+       ..++  |+||++|+..++.+.+...   
T Consensus        47 ~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~-~~~~~-------~v~~~~~~g~~~a~~~~~~~~~~~~---  115 (394)
T 2ay1_A           47 RAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGELILGD-GLKSE-------TTATLATVGGTGALRQALELARMAN---  115 (394)
T ss_dssp             HHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHHHHHGG-GCCGG-------GEEEEEEEHHHHHHHHHHHHHHHHC---
T ss_pred             HHHHHHHHHhcCCcccCCCCCCCCcHHHHHHHHHHHhCC-CCCcc-------cEEEEecCCchhHHHHHHHHHHhcC---
Confidence            4455555544322 2334555556678888888877432 22332       5777  9999999988877665420   


Q ss_pred             hCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccc
Q 037144          168 IGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAIT  247 (502)
Q Consensus       168 ~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G  247 (502)
                            +++.|+++..+|.++...++..|.   +++.+|.+..+++.+|+++|++++++..   ....+++.+.++|+||
T Consensus       116 ------~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~~---~~~~~~~~~~~~nptG  183 (394)
T 2ay1_A          116 ------PDLRVFVSDPTWPNHVSIMNFMGL---PVQTYRYFDAETRGVDFEGMKADLAAAK---KGDMVLLHGCCHNPTG  183 (394)
T ss_dssp             ------TTCCEEEEESCCHHHHHHHHHHTC---CEEEEECEETTTTEECHHHHHHHHHTCC---TTCEEEEESSSCTTTC
T ss_pred             ------CCCEEEEcCCCChhHHHHHHHcCC---ceEEEecccccCCccCHHHHHHHHHhCC---CCCEEEEeCCCCCCCC
Confidence                  455677888899999999999999   9999998532357899999999997531   1235677789999999


Q ss_pred             ccCC---hhHHHHHHHHhCCEEEeecccccccccC--c--cchhhhcCCCCCC-eeEEccCCcCCC-CCcceEEEe--eC
Q 037144          248 AVDP---LKPLCDVAKQFGIWVHVDAAYAGSACIC--P--EFRHFIDGVECVD-SFSFNPHKWLFT-TLDCCCLWV--KD  316 (502)
Q Consensus       248 ~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~--~--~~~~~~~~~~~aD-si~~~~hK~l~~-p~~~g~~~~--r~  316 (502)
                      .+-|   +++|+++|++||+++++|++|+++....  +  .... +... ..+ .+..++||+++. ...+|++++  ++
T Consensus       184 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~-~~~~i~~~s~sK~~~~~G~riG~~~~~~~~  261 (394)
T 2ay1_A          184 ANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRL-IASR-IPEVLIAASCSKNFGIYRERTGCLLALCAD  261 (394)
T ss_dssp             CCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHH-HHHH-CSSEEEEEECTTTTTCGGGCEEEEEEECSS
T ss_pred             CCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHH-Hhhc-CCCEEEEEeccCCCcCcCCccceEEEEeCC
Confidence            9865   6688999999999999999998754321  0  0111 1111 223 456689999974 345688887  34


Q ss_pred             chhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--c------HHHHHHHHHHHHHHHHH
Q 037144          317 PSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--G------VANLRNFIRSHVGMAKL  388 (502)
Q Consensus       317 ~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g------~~g~~~~~~~~~~la~~  388 (502)
                      +..+.............                 +..+   ...+..+++.+.+  +      .+.++++.++..+++++
T Consensus       262 ~~~~~~l~~~~~~~~~~-----------------~~~~---~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~  321 (394)
T 2ay1_A          262 AATRELAQGAMAFLNRQ-----------------TYSF---PPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQ  321 (394)
T ss_dssp             HHHHHHHHHHHHHHHHT-----------------TTSS---CCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhh-----------------hcCC---CChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHH
Confidence            43221111000000000                 0000   0223333333333  1      24677888888999999


Q ss_pred             HHHHHhcCC---CeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEe
Q 037144          389 FERLVTSDK---RFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTH  465 (502)
Q Consensus       389 l~~~l~~~~---~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~  465 (502)
                      +.+.|++++   ++++.. +..+++.|...+                            .   ..+.+.+.+.|.. +.+
T Consensus       322 l~~~L~~~~~~~~~~~~~-~~~g~~~~~~~~----------------------------~---~~~~~~l~~~gi~-v~~  368 (394)
T 2ay1_A          322 LAGELRDLSGSDRFGFVA-EHRGMFSRLGAT----------------------------P---EQVKRIKEEFGIY-MVG  368 (394)
T ss_dssp             HHHHHHHHHTSSTTTHHH-HCCSSEEECCCC----------------------------H---HHHHHHHHHHCEE-CCT
T ss_pred             HHHHHHhcCCCCCeeEEc-CCceEEEeeCCC----------------------------H---HHHHHHHHhCCEE-ecC
Confidence            999998763   355542 333344332111                            1   1344444456754 332


Q ss_pred             eeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144          466 AIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHL  499 (502)
Q Consensus       466 ~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~  499 (502)
                             .+|+++. . ++++++++++++|+++.
T Consensus       369 -------~~Ris~~-~-~~~~~i~~~~~~l~~~~  393 (394)
T 2ay1_A          369 -------DSRINIA-G-LNDNTIPILARAIIEVG  393 (394)
T ss_dssp             -------TCEEEGG-G-CCTTTHHHHHHHHHHHT
T ss_pred             -------CCeEEee-c-CCHhhHHHHHHHHHHcc
Confidence                   2699986 3 46679999999998763

>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3

Probab=99.81  E-value=9e-20  Score=189.09  Aligned_cols=159  Identities=14%  Similarity=0.130  Sum_probs=123.4

Q ss_pred             HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHH----H
Q 037144          117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKA----A  192 (502)
Q Consensus       117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a----a  192 (502)
                      ...++.+++++++|.+         ..+++++|++|+..++. ...           +++.|+++...|.++...    +
T Consensus       134 ~~~~l~~~la~~~g~~---------~~i~~~sGt~al~~~l~-~~~-----------~Gd~Vi~~~~~y~~~~~~~~~~~  192 (464)
T 1ibj_A          134 TRDALESLLAKLDKAD---------RAFCFTSGMAALSAVTH-LIK-----------NGEEIVAGDDVYGGSDRLLSQVV  192 (464)
T ss_dssp             HHHHHHHHHHHHHTCS---------EEEEESSHHHHHHHHHT-TSC-----------TTCEEEEESSCCHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHhCCC---------eEEEECCHHHHHHHHHH-HhC-----------CCCEEEEECCCchhHHHHHHHHH
Confidence            5677889999999875         35788888888755442 111           567888888899887654    4


Q ss_pred             HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccc
Q 037144          193 QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAY  272 (502)
Q Consensus       193 ~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~  272 (502)
                      +..|+   +++.+|.+       |+++|+++|+++      +.+|+++.++|++|.+.|+++|+++|++||+++++|++|
T Consensus       193 ~~~G~---~v~~v~~~-------d~~~l~~~i~~~------tk~v~l~~p~NptG~v~~l~~i~~la~~~gi~livDea~  256 (464)
T 1ibj_A          193 PRSGV---VVKRVNTT-------KLDEVAAAIGPQ------TKLVWLESPTNPRQQISDIRKISEMAHAQGALVLVDNSI  256 (464)
T ss_dssp             GGGTC---EEEEECTT-------SHHHHHHHCCSS------EEEEEECSSCTTTCCCCCHHHHHHHHHTTTCEEEEECTT
T ss_pred             HHcCC---EEEEeCCC-------CHHHHHHHhccC------ceEEEEeCCCCCCCEeecHHHHHHHHHHcCCEEEEECCC
Confidence            56788   88888863       889999988643      348889999999999999999999999999999999999


Q ss_pred             ccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcc--eEEEeeCchh
Q 037144          273 AGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDC--CCLWVKDPSC  319 (502)
Q Consensus       273 g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~--g~~~~r~~~~  319 (502)
                      +.+....+. .      .++|+++.++||++++|.|+  |+++++++..
T Consensus       257 ~~g~~~~~~-~------~~~div~~S~sK~~~g~~Gl~~G~l~~~~~~l  298 (464)
T 1ibj_A          257 MSPVLSRPL-E------LGADIVMHSATKFIAGHSDVMAGVLAVKGEKL  298 (464)
T ss_dssp             TCTTTCCGG-G------TTCSEEEEETTTTTTCSSCCCCEEEEECSHHH
T ss_pred             cccccCChh-h------cCCEEEEECCcccccCCCCCcEEEEEEChHHH
Confidence            765432221 1      16899999999999988765  8888876443

>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B

Probab=99.81  E-value=2.6e-19  Score=182.69  Aligned_cols=215  Identities=12%  Similarity=0.094  Sum_probs=145.7

Q ss_pred             ChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHH
Q 037144          111 SPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQK  190 (502)
Q Consensus       111 ~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~  190 (502)
                      .|...++|+.    +++++|.+.         .+++++|++|+..++. ...           +++.|+++...|.+...
T Consensus        66 ~p~~~~l~~~----la~~~g~~~---------~i~~~sG~~ai~~~~~-l~~-----------~gd~Vl~~~~~y~~~~~  120 (403)
T 3cog_A           66 NPTRNCLEKA----VAALDGAKY---------CLAFASGLAATVTITH-LLK-----------AGDQIICMDDVYGGTNR  120 (403)
T ss_dssp             CHHHHHHHHH----HHHHHTCSE---------EEEESCHHHHHHHHHT-TSC-----------TTCEEEEESSCCHHHHH
T ss_pred             CchHHHHHHH----HHHHhCCCc---------EEEECCHHHHHHHHHH-HhC-----------CCCEEEEeCCCcchHHH
Confidence            4555556555    566667652         4556667788876655 321           56788888889987544


Q ss_pred             H----HHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhC-CE
Q 037144          191 A----AQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFG-IW  265 (502)
Q Consensus       191 a----a~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g-~~  265 (502)
                      .    ++..|+   +++.+|.+       |+++|+++|+++      +.+|+++.++|++|.+.|+++|+++|+++| ++
T Consensus       121 ~~~~~~~~~G~---~v~~v~~~-------d~~~l~~~i~~~------t~~v~~~~p~nptG~~~~l~~i~~la~~~g~~~  184 (403)
T 3cog_A          121 YFRQVASEFGL---KISFVDCS-------KIKLLEAAITPE------TKLVWIETPTNPTQKVIDIEGCAHIVHKHGDII  184 (403)
T ss_dssp             HHHHTGGGGTC---EEEEECTT-------SHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHTSSSCCE
T ss_pred             HHHHHHHHcCC---EEEEECCC-------CHHHHHHhcCcC------CeEEEEECCCCCCCeeeCHHHHHHHHHHcCCCE
Confidence            3    456788   88888864       789999988653      347888999999999999999999999999 99


Q ss_pred             EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCccc
Q 037144          266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQ  343 (502)
Q Consensus       266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~  343 (502)
                      +++|++|+.+....+ ..      .++|.++.++||++++|.+  +|+++.+++..... +..   +....         
T Consensus       185 livD~~~~~~~~~~~-~~------~~~div~~S~sK~~~g~~~~~~G~v~~~~~~l~~~-l~~---~~~~~---------  244 (403)
T 3cog_A          185 LVVDNTFMSPYFQRP-LA------LGADISMYSATKYMNGHSDVVMGLVSVNCESLHNR-LRF---LQNSL---------  244 (403)
T ss_dssp             EEEECTTTCTTTCCT-TT------TTCSEEEEETTTTTTCSSCCCCEEEEECCHHHHHH-HHH---HHHHH---------
T ss_pred             EEEECCCcccccCCc-cc------cCCeEEEEcChhhccCCCCCeEEEEEECcHHHHHH-HHH---HHHhc---------
Confidence            999999987654222 11      1689999999999998876  48887766543321 110   10000         


Q ss_pred             ccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCe
Q 037144          344 EVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRF  399 (502)
Q Consensus       344 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~  399 (502)
                                 +-....+..|++++.+  +.+..++++..+++..+.+.+++.+.+
T Consensus       245 -----------g~~~~~~~~~~~~~~l--~~l~~r~~~~~~n~~~l~~~l~~~~~v  287 (403)
T 3cog_A          245 -----------GAVPSPIDCYLCNRGL--KTLHVRMEKHFKNGMAVAQFLESNPWV  287 (403)
T ss_dssp             -----------CCCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHTCTTE
T ss_pred             -----------CCCCCHHHHHHHHhhh--hHHHHHHHHHHHHHHHHHHHHhcCCCE
Confidence                       0001345566666544  344556666777777777777665433

>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...

Probab=99.81  E-value=3.3e-19  Score=181.20  Aligned_cols=320  Identities=11%  Similarity=0.030  Sum_probs=199.8

Q ss_pred             HHHHHHHHhhcCC-CCcccccChhhHHHHHHHHHHHHHhcCC--CCccCcCCCCcEEE--cCCchHHHHHHHHHHHHHHH
Q 037144           91 GIVGEMLSSGFNV-VGLDWISSPAAVELENIVMDWLGQMLDL--PKSFLFSGNGGGVI--QGTTCEALLCTLTAARDRVL  165 (502)
Q Consensus        91 ~~~~~~l~~~~n~-~~~~~~~~p~~~~le~~~~~~l~~l~g~--~~~~~~~~~~~g~~--t~ggt~a~~~al~~a~~~~~  165 (502)
                      ..+.+.+...+.. ....|...++..++++.+.+|+....+.  +.+       ..++  |+||++|+..++.+++..  
T Consensus        47 ~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~-------~v~~~~~~g~~~a~~~~~~~~~~~--  117 (396)
T 2q7w_A           47 TSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDK-------RARTAQTPGGTGALRVAADFLAKN--  117 (396)
T ss_dssp             HHHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTT-------CEEEEEESHHHHHHHHHHHHHHHH--
T ss_pred             HHHHHHHHhhcCcccccCCCCCCCCHHHHHHHHHHHhcCCCCccccc-------cEEEEecccchhhHHHHHHHHHHh--
Confidence            3344555544322 2334655566788888888887654332  122       4676  999999998887665431  


Q ss_pred             HHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcc
Q 037144          166 KKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTA  245 (502)
Q Consensus       166 ~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~  245 (502)
                      .       +++.|++...+|.++...++..|.   +++.+|.++.+++.+|+++|++++++..   ....+++.+.++|+
T Consensus       118 ~-------~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~~---~~~~~v~~~~p~np  184 (396)
T 2q7w_A          118 T-------SVKRVWVSNPSWPNHKSVFNSAGL---EVREYAYYDAENHTLDFDALINSLNEAQ---AGDVVLFHGCCHNP  184 (396)
T ss_dssp             S-------CCCEEEEEESCCTHHHHHHHHTTC---EEEEEECEETTTTEECHHHHHHHHTTCC---TTCEEEEECSSCTT
T ss_pred             C-------CCCEEEEcCCCchhHHHHHHHcCC---ceEEEecccCCCCCcCHHHHHHHHHhCC---CCCEEEEeCCCCCC
Confidence            0       567788888999999999999999   9999998532257899999999986421   12356778899999


Q ss_pred             ccccCC---hhHHHHHHHHhCCEEEeecccccccccC--c--cchhhhcCCCCCCeeEEccCCcCCC-CCcceEEEe--e
Q 037144          246 ITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACIC--P--EFRHFIDGVECVDSFSFNPHKWLFT-TLDCCCLWV--K  315 (502)
Q Consensus       246 ~G~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~--~--~~~~~~~~~~~aDsi~~~~hK~l~~-p~~~g~~~~--r  315 (502)
                      ||.+-|   +++|+++|++||+++++|++|+++....  +  .... +.....-+.++.++||+++. ...+|++++  +
T Consensus       185 tG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~  263 (396)
T 2q7w_A          185 TGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRA-FAAMHKELIVASSYSXNFGLYNERVGACTLVAA  263 (396)
T ss_dssp             TCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHH-HHHHCSCEEEEEECTTTTTCGGGCCEEEEEECS
T ss_pred             CCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHH-HHhcCCcEEEEEeccccccccccccceEEEEcC
Confidence            999854   6689999999999999999997754321  0  1111 11111234667889999974 344788876  3


Q ss_pred             Cchh---hhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc--------HHHHHHHHHHHHH
Q 037144          316 DPSC---LLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG--------VANLRNFIRSHVG  384 (502)
Q Consensus       316 ~~~~---l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g--------~~g~~~~~~~~~~  384 (502)
                      ++..   +...+..   .....                 ..+   ...+..+++...+.        .+.+++..+++.+
T Consensus       264 ~~~~~~~~~~~~~~---~~~~~-----------------~~~---~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~  320 (396)
T 2q7w_A          264 DSETVDRAFSQMKA---AIRAN-----------------YSN---PPAHGASVVATILSNDALRAIWEQELTDMRQRIQR  320 (396)
T ss_dssp             SHHHHHHHHHHHHH---HHHTT-----------------TSS---CCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHH
T ss_pred             CHHHHHHHHHHHHH---HHhhc-----------------cCC---CCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHH
Confidence            4421   1111110   00000                 000   02233334444332        2466777888899


Q ss_pred             HHHHHHHHHhcCC---CeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcE
Q 037144          385 MAKLFERLVTSDK---RFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKV  461 (502)
Q Consensus       385 la~~l~~~l~~~~---~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~  461 (502)
                      +++++.+.|++.+   ++++. ++..+++.|.-.+                            .   ..+.+.+.+.|..
T Consensus       321 ~~~~l~~~L~~~~~~~~~~~~-~~~~~~~~~~~~~----------------------------~---~~~~~~l~~~gv~  368 (396)
T 2q7w_A          321 MRQLFVNTLQEKGANRDFSFI-IKQNGMFSFSGLT----------------------------K---EQVLRLREEFGVY  368 (396)
T ss_dssp             HHHHHHHHHHHTTCCSCCTHH-HHCCSSEEECCCC----------------------------H---HHHHHHHHHHCEE
T ss_pred             HHHHHHHHHHhcCCCCCccee-cCCCceEEEecCC----------------------------H---HHHHHHHHhcCee
Confidence            9999999998874   36554 3444555442111                            1   1334444455754


Q ss_pred             EEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144          462 FMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEH  498 (502)
Q Consensus       462 ~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~  498 (502)
                       +.+       .+|++++..  +++++++++++|+++
T Consensus       369 -v~~-------~~Ris~~~~--~~e~i~~~~~~l~~~  395 (396)
T 2q7w_A          369 -AVA-------SGRVNVAGM--TPDNMAPLCEAIVAV  395 (396)
T ss_dssp             -CCT-------TCEEEGGGC--CTTTHHHHHHHHHHH
T ss_pred             -ecC-------CceEEEeec--CHHHHHHHHHHHHhc
Confidence             333       269998732  566999999999875

>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}

Probab=99.81  E-value=9.8e-18  Score=170.40  Aligned_cols=301  Identities=12%  Similarity=0.046  Sum_probs=178.1

Q ss_pred             HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCC-chhHHHHHH
Q 037144          115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQT-HCAFQKAAQ  193 (502)
Q Consensus       115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~-H~s~~~aa~  193 (502)
                      .....++.+++++++|. +        ..++++||++|+..++.+++...... +   .++..|++.+.. |.+...+..
T Consensus        77 ~~~~~~l~~~la~~~~~-~--------~v~~~~gg~ea~~~al~~~~~~~~~~-g---~~~~~vi~~~~~yhg~~~~~~~  143 (395)
T 3nx3_A           77 NENIAAAAKNLAKASAL-E--------RVFFTNSGTESIEGAMKTARKYAFNK-G---VKGGQFIAFKHSFHGRTLGALS  143 (395)
T ss_dssp             CHHHHHHHHHHHHHHTC-S--------EEEEESSHHHHHHHHHHHHHHHHHHT-T---CTTCEEEEETTCCCCSSHHHHT
T ss_pred             CHHHHHHHHHHHHhcCC-C--------eEEEeCCHHHHHHHHHHHHHHHhhcc-C---CCCCEEEEEcCCcCCCCHHHHh
Confidence            34566777888888873 2        58999999999999998887643221 1   134445554444 444333332


Q ss_pred             HcCC---------CCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHHHH
Q 037144          194 IVGI---------DRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDVAK  260 (502)
Q Consensus       194 ~~Gl---------g~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~~  260 (502)
                      ..+-         -...+..+|.+       |+++|+++++++      +.+|++....+++|.+.|    +++|+++|+
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~-------d~~~l~~~l~~~------~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~  210 (395)
T 3nx3_A          144 LTANEKYQKPFKPLISGVKFAKYN-------DISSVEKLVNEK------TCAIILESVQGEGGINPANKDFYKALRKLCD  210 (395)
T ss_dssp             TCCCHHHHGGGCSCCSCEEEECTT-------CHHHHHTTCCTT------EEEEEEESEECTTSCEECCHHHHHHHHHHHH
T ss_pred             hcCCcccccccCCCCCCcEEeCCC-------CHHHHHHhccCC------eEEEEEeCccCCCCcccCCHHHHHHHHHHHH
Confidence            2220         01155666542       799999988643      346777777788898877    999999999


Q ss_pred             HhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCC
Q 037144          261 QFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEP  340 (502)
Q Consensus       261 ~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~  340 (502)
                      +||+++|+|++|.++......+.....++ ..|.++++  |.++.+.+.|+++.++. .+.+.+...   ....      
T Consensus       211 ~~~~~li~Dev~~~~g~~g~~~~~~~~~~-~~d~~t~s--K~~~~G~~~G~~~~~~~-~~~~~~~~~---~~~~------  277 (395)
T 3nx3_A          211 EKDILLIADEIQCGMGRSGKFFAYEHAQI-LPDIMTSA--KALGCGLSVGAFVINQK-VASNSLEAG---DHGS------  277 (395)
T ss_dssp             HHTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGTTTSCCEEEEECHH-HHHHHSCTT---CCSS------
T ss_pred             HcCCEEEEEecccCCCcCCcchhHHhcCC-CCCEEEec--ccccCCCceEEEEEchh-hhhhhcCCc---ccCC------
Confidence            99999999999976532211111111122 46777654  98887778898877543 212222111   0000      


Q ss_pred             cccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHh----cCCCeEEecCCCeeEEEEEeec
Q 037144          341 KEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVT----SDKRFEVAFPRNFSLVCFRVTP  416 (502)
Q Consensus       341 ~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~----~~~~~~l~~~~~~~~v~f~~~~  416 (502)
                                +.    ....+.+.+++..+..-.-++..++..++.+++++.|+    +.|.+..+ ++..+++.+.+..
T Consensus       278 ----------~~----~~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~~  342 (395)
T 3nx3_A          278 ----------TY----GGNPLVCAGVNAVFEIFKEEKILENVNKLTPYLEQSLDELINEFDFCKKR-KGLGFMQGLSLDK  342 (395)
T ss_dssp             ----------CB----SCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE-EEETTEEEEEECT
T ss_pred             ----------CC----CCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EeEEEEEEEEeCC
Confidence                      00    01233333333333110112344555555556555554    45555443 2334566666643


Q ss_pred             CcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHH
Q 037144          417 SAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQ  496 (502)
Q Consensus       417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~  496 (502)
                      ..                            ...++.+.+.++|.++.+.    +..++|+++. ..++++++++++++|+
T Consensus       343 ~~----------------------------~~~~~~~~l~~~Gi~v~~~----~~~~iRi~~~-~~~t~e~i~~~l~~l~  389 (395)
T 3nx3_A          343 SV----------------------------KVAKVIQKCQENALLLISC----GENDLRFLPP-LILQKEHIDEMSEKLR  389 (395)
T ss_dssp             TS----------------------------CHHHHHHHHHHTTEECEEE----TTTEEEECCC-TTCCHHHHHHHHHHHH
T ss_pred             cc----------------------------hHHHHHHHHHHCCCEEecC----CCCEEEEECC-CCCCHHHHHHHHHHHH
Confidence            20                            0245677777788754333    3568999874 5567889999999999


Q ss_pred             HHHHhC
Q 037144          497 EHLEAF  502 (502)
Q Consensus       497 ~~~~~~  502 (502)
                      ++.+++
T Consensus       390 ~~l~~~  395 (395)
T 3nx3_A          390 KALKSF  395 (395)
T ss_dssp             HHHHTC
T ss_pred             HHHHhC
Confidence            987653

>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*

Probab=99.81  E-value=1.2e-17  Score=172.31  Aligned_cols=316  Identities=10%  Similarity=-0.058  Sum_probs=183.9

Q ss_pred             hHHHHHHHHHHHHHhcCCCC-ccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHH
Q 037144          114 AVELENIVMDWLGQMLDLPK-SFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAA  192 (502)
Q Consensus       114 ~~~le~~~~~~l~~l~g~~~-~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa  192 (502)
                      ..+...++.++++++++... +       ..+||+||++|+..++.+++... +       ++.+|+.....|.+...+.
T Consensus        84 ~~~~~~~l~~~la~~~~~~~~~-------~v~~~~ggsea~~~al~~~~~~~-~-------~~~vi~~~~~yhg~~~~~~  148 (439)
T 3dxv_A           84 SNAPAVTLAERLLASFPGEGTH-------KIWFGHSGSDANEAAYRAIVKAT-G-------RSGVIAFAGAYHGCTVGSM  148 (439)
T ss_dssp             EEHHHHHHHHHHHHTTTCTTTE-------EEEEESSHHHHHHHHHHHHHHHH-S-------CCEEEEETTCCCCSSHHHH
T ss_pred             CCHHHHHHHHHHHHhCCCCCCC-------EEEEeCCHHHHHHHHHHHHHHHh-C-------CCEEEEECCCCCCCcHHHH
Confidence            34567778899999986533 2       58999999999999999876431 0       3456666666676666555


Q ss_pred             HHcCCCC--C---------CEEEEecCCCCCccc-----CHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----h
Q 037144          193 QIVGIDR--K---------NIRAIKTTKSSSYGL-----SAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----L  252 (502)
Q Consensus       193 ~~~Glg~--~---------~v~~v~~~~~~~~~~-----d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l  252 (502)
                      .+.|...  -         .+..+|.+.  .+..     |+++|+++|++.  ....+.+|+++...+++|.+.|    +
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~le~~l~~~--~~~~~~~vi~~p~~~~~G~~~~~~~~l  224 (439)
T 3dxv_A          149 AFSGHSVQADAAKADGLILLPYPDPYRP--YRNDPTGDAILTLLTEKLAAV--PAGSIGAAFIEPIQSDGGLIVPPDGFL  224 (439)
T ss_dssp             CC-------------CEEEECCCCSSSC--BTTBTTSHHHHHHHHHHHHTS--CTTCEEEEEECSSBSTTTSBCCCTTHH
T ss_pred             hhcCCCchhhccccCCCCCCcEEcCCCc--ccccccHHHHHHHHHHHHHhc--CCCCEEEEEEccccCCCCCccCCHHHH
Confidence            4444310  0         013344332  1122     799999999511  1223567888888888999988    9


Q ss_pred             hHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCccccc
Q 037144          253 KPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLK  332 (502)
Q Consensus       253 ~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~  332 (502)
                      ++|.++|++||+++++|.+|+++............++ ..|.++  +.|.++.....|+++.++. .. +.+...   ..
T Consensus       225 ~~l~~l~~~~~~~li~DE~~~g~g~~g~~~~~~~~~~-~~di~s--~sK~~~~G~riG~~~~~~~-~~-~~~~~~---~~  296 (439)
T 3dxv_A          225 RKFADICRAHGILVVCDEVKVGLARSGRLHCFEHEGF-VPDILV--LGKGLGGGLPLSAVIAPAE-IL-DCASAF---AM  296 (439)
T ss_dssp             HHHHHHHHHTTCEEEEECTTTCTTTTSSSSGGGGTTC-CCSEEE--ECGGGGTTSCCEEEEEEHH-HH-TSCSSS---SC
T ss_pred             HHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhcCC-CCCEEE--EcchhcCCcceEEEEECHH-HH-hhhcCC---Cc
Confidence            9999999999999999999986422111011011122 366664  5699986667888877532 22 222110   00


Q ss_pred             CccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEecCCCee
Q 037144          333 NEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTS----DKRFEVAFPRNFS  408 (502)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~----~~~~~l~~~~~~~  408 (502)
                      .                .+.     ..++.+.+++..+..-.-.+++++..++.+++++.|++    .+.+..+ ++..+
T Consensus       297 ~----------------~t~-----~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~g~  354 (439)
T 3dxv_A          297 Q----------------TLH-----GNPISAAAGLAVLETIDRDDLPAMAERKGRLLRDGLSELAKRHPLIGDI-RGRGL  354 (439)
T ss_dssp             C----------------TTT-----TCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE-EEETT
T ss_pred             C----------------CCc-----ccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EEEEE
Confidence            0                001     13344444443332111134556666667777666654    4555443 33445


Q ss_pred             EEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHH
Q 037144          409 LVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHV  488 (502)
Q Consensus       409 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di  488 (502)
                      ++.+.+.......                    ........++.+.+.++|.++.+..  ....++|++++ ...+++++
T Consensus       355 ~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~l~~~Gv~v~~~~--~~~~~iRi~~~-~~~t~e~i  411 (439)
T 3dxv_A          355 ACGMELVCDRQSR--------------------EPARAETAKLIYRAYQLGLVVYYVG--MNGNVLEFTPP-LTITETDI  411 (439)
T ss_dssp             EEEEEEEEETTTT--------------------EECHHHHHHHHHHHHHHTEECEEES--TTSCEEEECCC-TTCCHHHH
T ss_pred             EEEEEEecCcccc--------------------CCCHHHHHHHHHHHHHCCcEEeecC--CCCCEEEEECC-CCCCHHHH
Confidence            5666553211000                    0002234567777777887544332  22368999874 45677899


Q ss_pred             HHHHHHHHHHHHh
Q 037144          489 RAAWTVVQEHLEA  501 (502)
Q Consensus       489 ~~~~~~l~~~~~~  501 (502)
                      ++++++|+++.++
T Consensus       412 ~~~l~~l~~~l~~  424 (439)
T 3dxv_A          412 HKALDLLDRAFSE  424 (439)
T ss_dssp             HHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999988764

>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*

Probab=99.80  E-value=1.9e-18  Score=185.76  Aligned_cols=238  Identities=11%  Similarity=0.111  Sum_probs=163.3

Q ss_pred             HHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCC
Q 037144          120 IVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDR  199 (502)
Q Consensus       120 ~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~  199 (502)
                      ++.+.+++++|.+..        .++++|++.||..++.+...           +++.|+++..+|.|+..++.+.|+  
T Consensus       199 eaE~~lA~~fGa~~a--------~~v~nGts~An~~ai~al~~-----------pGD~VLv~r~~H~S~~~~l~lsGa--  257 (715)
T 3n75_A          199 EAEQYIARVFNADRS--------YMVTNGTSTANKIVGMYSAP-----------AGSTILIDRNCHKSLTHLMMMSDV--  257 (715)
T ss_dssp             HHHHHHHHHHTCSEE--------EEESSHHHHHHHHHHHHHCC-----------TTCEEEEESSCCHHHHHHHHHSCC--
T ss_pred             HHHHHHHHHhCCCCc--------eEECcHHHHHHHHHHHHhCC-----------CCCEEEECCCccHHHHHHHHHcCC--
Confidence            445668899998753        45566667888777766543           788999999999999999999999  


Q ss_pred             CCEEEEecCCCCCcc----c-----CHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeec
Q 037144          200 KNIRAIKTTKSSSYG----L-----SAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDA  270 (502)
Q Consensus       200 ~~v~~v~~~~~~~~~----~-----d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDa  270 (502)
                       .++.++.+.+ ++.    +     |+++|+++|++..+ .+.|.+|+++.+ |++|.+.|+++|+++|+++  +++||+
T Consensus       258 -~pv~v~~~~~-~~gi~~~i~~~~~d~e~Le~~l~~~~~-~k~p~~vivt~p-n~~G~v~dl~~I~ela~~~--~livDE  331 (715)
T 3n75_A          258 -TPIYFRPTRN-AYGILGGIPQSEFQHATIAKRVKETPN-ATWPVHAVITNS-TYDGLLYNTDFIKKTLDVK--SIHFDS  331 (715)
T ss_dssp             -EEEEECCCBC-TTCCBCCCCGGGGSHHHHHHHHHHSTT-CCSCSEEEEESS-CTTSEEECHHHHHHHCCCS--EEEEEC
T ss_pred             -EEEEEecccc-ccccccCcccccCCHHHHHHHHhhCcC-ccCceEEEEECC-CCCCccCCHHHHHHHhCcC--cEEEcc
Confidence             9999987643 333    3     89999999987432 123557888888 8999999999999999876  389999


Q ss_pred             ccccccccCccchhh--hcCCCCCCee---EEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCccccc
Q 037144          271 AYAGSACICPEFRHF--IDGVECVDSF---SFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEV  345 (502)
Q Consensus       271 A~g~~~~~~~~~~~~--~~~~~~aDsi---~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~  345 (502)
                      ||+++..+.+.....  +..-..+|.+   +.++||+++++.++|++++++... ...+.....++....          
T Consensus       332 AH~~~~~f~~~~~~~~al~~g~~aD~vii~~~S~hKtL~gltqgs~i~v~~~i~-~~~~~~~~~~~~STS----------  400 (715)
T 3n75_A          332 AWVPYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVN-EETFNEAYMMHTTTS----------  400 (715)
T ss_dssp             TTCTTGGGSGGGTTSSTTSSSCCTTCEEEEEECHHHHSSCCTTCEEEEEESCCC-HHHHHHHHHHTSCSS----------
T ss_pred             ccccccccCCccccccccccCcCCCEEEEEEecccccccCCCCeeEEEeCchhh-HHHHHHHHHhhcCCC----------
Confidence            999876555543311  1110136876   899999999988899999986521 111211111221110          


Q ss_pred             CCCcccccCCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC------eEEecCC
Q 037144          346 GYKDWQITLCRRF-RSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKR------FEVAFPR  405 (502)
Q Consensus       346 ~~~~~~~~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~------~~l~~~~  405 (502)
                                -.. ...++-.+++.+-...-.+++++..+++++|++.|+++++      |+++.+.
T Consensus       401 ----------psy~~~AsldaA~~~~~~~~g~~~~~~l~~~a~~~r~~L~~i~~~~~~~~~~~~~~~  457 (715)
T 3n75_A          401 ----------PHYGIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPD  457 (715)
T ss_dssp             ----------CCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCEESSCS
T ss_pred             ----------chHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhhcccceeeccCcc
Confidence                      000 1123334454443322345788999999999999988764      6777543

>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}

Probab=99.80  E-value=7.7e-19  Score=185.57  Aligned_cols=365  Identities=8%  Similarity=0.022  Sum_probs=214.3

Q ss_pred             CHHHHHHHHHHhhcCCCCcccc-cChhhHHHHHHHHHHHHHhc-C-CCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHH
Q 037144           88 SVAGIVGEMLSSGFNVVGLDWI-SSPAAVELENIVMDWLGQML-D-LPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRV  164 (502)
Q Consensus        88 ~~~~~~~~~l~~~~n~~~~~~~-~~p~~~~le~~~~~~l~~l~-g-~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~  164 (502)
                      .+|..+.++.......   .|. ...+..++++++.+++.+.+ + .+...    ....++|+|||+|+..++.+...+.
T Consensus       116 ~~~~~v~a~~~~~~~~---~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~----~~~i~~t~G~t~al~~~~~~l~~~~  188 (533)
T 3f6t_A          116 NRDKVVAEWVNGAVAN---NYPVPDRCLVNTEKIINYFLQELSYKDANLAE----QTDLFPTEGGTAAIVYAFHSLAENH  188 (533)
T ss_dssp             CHHHHHHHHHHHHHTC---SCCSSSSCCHHHHHHHHHHHHHHHTTTCCCGG----GEEEEEEEHHHHHHHHHHHHHHHTT
T ss_pred             CCcHHHHHHHHHHHhC---CCCCCcccHHHHHHHHHHHHHHhcCCCCCCCC----cceEEEECCHHHHHHHHHHHhhhhh
Confidence            3667776666655532   232 44567889999999997773 3 32210    0158999999999987776532110


Q ss_pred             HHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCC--CCCcccCHHHHHHHHHHHHhcCCccEEEEEecC
Q 037144          165 LKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTK--SSSYGLSAESVLSQINLDVEAELIPLFLCATVG  242 (502)
Q Consensus       165 ~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~--~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~g  242 (502)
                      +      -.+++.|+++...|.++..+++..|.   .++.+|++.  +.++.+|+++|+++++++      +.+|+++.+
T Consensus       189 l------~~~gd~Viv~~p~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~~~d~~~l~~~l~~~------~k~v~l~~p  253 (533)
T 3f6t_A          189 L------LKKGDKIAINEPIFTPYLRIPELKDY---ELVEVDLHSYEKNDWEIEPNEIEKLKDPS------IKALIVVNP  253 (533)
T ss_dssp             S------SCTTCEEEEESSCCHHHHTSGGGGGS---EEEEECCCEETTTTSEECHHHHHHHSCTT------EEEEEEESS
T ss_pred             c------cCCcCEEEEcCCCcHHHHHHHHHcCC---eEEEEEecCCcccCCCCCHHHHHHHhCCC------CeEEEEeCC
Confidence            0      01567899999999999999999999   999999864  345899999999988643      347888899


Q ss_pred             CccccccCChh---HHHHHHH-HhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCc
Q 037144          243 TTAITAVDPLK---PLCDVAK-QFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDP  317 (502)
Q Consensus       243 tt~~G~idpl~---eI~~i~~-~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~  317 (502)
                      +|++|.+-|.+   +|+++|+ +||+++++|.+|+.+..........   ....+.++.+++|.++.| ..+|+++.++.
T Consensus       254 ~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~~~~~~---~~~~~i~~~S~SK~~g~~G~RiG~l~~~~~  330 (533)
T 3f6t_A          254 TNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFKSIYSV---VPYNTMLVYSYSKLFGCTGWRLGVIALNEK  330 (533)
T ss_dssp             CTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCCCHHHH---SGGGEEEEEESHHHHTCGGGCEEEEEEESS
T ss_pred             CCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCccCHhhc---CCCCEEEEecCcccCCCcccceEEEEECcH
Confidence            99999997666   8888888 5899999999998655422222111   124457888999999743 44788888776


Q ss_pred             hhhhhhhcCCcc---------cccCccCCCCCcccccCC--------CcccccCCCCCCchHHHH----HHHHh------
Q 037144          318 SCLLSTLSTNPQ---------YLKNEATDQEPKEQEVGY--------KDWQITLCRRFRSLKLWV----VIRNF------  370 (502)
Q Consensus       318 ~~l~~~~~~~~~---------yl~~~~~~~~~~~~~~~~--------~~~~~~~sr~~~al~~~~----~l~~~------  370 (502)
                      ..+.......++         |-... .    .+....+        .................+    ++..+      
T Consensus       331 ~~~~~li~~l~~~~~~~~~~~~~~~~-~----~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a~a~~a~~~L~~~~g~  405 (533)
T 3f6t_A          331 NVFDDNIAHLDKVELRQLHKRYSSVV-L----DPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIMEALFSMTHLLTSTNG  405 (533)
T ss_dssp             CHHHHHHHTSCHHHHHHHHHHHHTTC-S----CGGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHHHHHHHHHHHTTCBGG
T ss_pred             HHHHHHHHhcchhhHHHHHhhhhccc-c----CcchhhhHHHHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHhhhccc
Confidence            332222211110         00000 0    0000000        000000000011112221    23333      


Q ss_pred             --cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhH-hh--H
Q 037144          371 --GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEE-RT--N  445 (502)
Q Consensus       371 --g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~  445 (502)
                        ..+.++++.+++.+++++|.+.|. + ++++. ++..++++|.-.+.-... +.             ..+.. ..  +
T Consensus       406 ~~~~~~~~~~~~~~~~r~~~l~~~L~-~-~~~~~-~~~~g~~~~~~l~~~~~~-~~-------------g~~~~~~~~~~  468 (533)
T 3f6t_A          406 GSDDPYIDIARKLVSERYDQLHDAMQ-A-PKDET-DTNTHYYSLIDIYRLAEK-IY-------------GKEFRDYLTNN  468 (533)
T ss_dssp             GTBCHHHHHHHHHHHHHHHHHHHHHT-C-CCCCS-TTBCCSEEEEEHHHHHHH-HH-------------CHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHhcC-C-Ccccc-CCCceEEEEEehHhhhhh-cc-------------chHHHHHhhcc
Confidence              235677888888999999999997 5 45543 455555444322110000 00             00000 00  0


Q ss_pred             HHHHHHHHHHH-hcCcEEEEeeeEC-CEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          446 EFNRELLESIN-VSGKVFMTHAIVG-GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       446 ~~~~~l~~~l~-~~g~~~~~~~~~~-g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      ....++..++. +.|.++.++..+. +..++|+++++  .++++|+++++.|.++.++
T Consensus       469 ~~~~~~~~~ll~~~GV~v~pg~~f~~~~~~iRls~a~--~~~e~i~~~i~~L~~~l~~  524 (533)
T 3f6t_A          469 FEQVDFLLKLAEKNGVVLVDGVGFGAKPGELRVSQAN--LPTEDYALIGKQVLELLKE  524 (533)
T ss_dssp             CCHHHHHHHHHHHTTSSSCTTEEECSSTTEEEEESSS--SCHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHhCCEEEeCCcccCCCCCEEEEEEee--CCHHHHHHHHHHHHHHHHH
Confidence            00123444444 4576544333332 25689999864  3567999999999988764

>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*

Probab=99.80  E-value=3.5e-18  Score=169.78  Aligned_cols=298  Identities=10%  Similarity=0.010  Sum_probs=190.7

Q ss_pred             HHHHHHHHHhhcC-CCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHh
Q 037144           90 AGIVGEMLSSGFN-VVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKI  168 (502)
Q Consensus        90 ~~~~~~~l~~~~n-~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~  168 (502)
                      +..+.+.+...+. .....|.. +...++++.+.+++.+. ..+.+       ..++|+|+++++..++.+.        
T Consensus        34 ~~~v~~a~~~~~~~~~~~~y~~-~~~~~lr~~la~~~~~~-~~~~~-------~v~~~~G~~~al~~~~~~~--------   96 (335)
T 1uu1_A           34 PEDLVDEVFRRLNSDALRIYYD-SPDEELIEKILSYLDTD-FLSKN-------NVSVGNGADEIIYVMMLMF--------   96 (335)
T ss_dssp             CHHHHHHHHHTCCGGGGGSCCC-SSCHHHHHHHHHHHTCS-SCCGG-------GEEEESSHHHHHHHHHHHS--------
T ss_pred             CHHHHHHHHHHhhhhhhhcCCC-CchHHHHHHHHHHcCCC-CCCHH-------HEEEcCChHHHHHHHHHHh--------
Confidence            3445555555552 22223422 23455555544444322 15443       6899999999987666543        


Q ss_pred             CccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144          169 GRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA  248 (502)
Q Consensus       169 ~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~  248 (502)
                            ++.|+++ .+|.++...++..|.   +++.+|+++  ++.+|+++|     +      .+.+|+++.++|++|.
T Consensus        97 ------gd~Vl~~-p~y~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l-----~------~~~~v~l~~p~nptG~  153 (335)
T 1uu1_A           97 ------DRSVFFP-PTYSCYRIFAKAVGA---KFLEVPLTK--DLRIPEVNV-----G------EGDVVFIPNPNNPTGH  153 (335)
T ss_dssp             ------SEEEECS-SSCHHHHHHHHHHTC---EEEECCCCT--TSCCCCCCC-----C------TTEEEEEESSCTTTCC
T ss_pred             ------CCcEEEC-CCcHHHHHHHHHcCC---eEEEeccCC--CCCCCHHHc-----C------CCCEEEEeCCCCCCCC
Confidence                  3568888 999999999999999   999999864  467888877     1      2347777889999999


Q ss_pred             cCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCC
Q 037144          249 VDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTN  327 (502)
Q Consensus       249 idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~  327 (502)
                      +-|.++|.++++..| ++++|++|+.+...  .....+. ....+.++.+++|+++.| ..+|++++ ++..........
T Consensus       154 ~~~~~~l~~l~~~~~-~li~De~~~~~~~~--~~~~~~~-~~~~~i~~~s~sK~~g~~G~r~G~~~~-~~~~~~~l~~~~  228 (335)
T 1uu1_A          154 VFEREEIERILKTGA-FVALDEAYYEFHGE--SYVDFLK-KYENLAVIRTFSKAFSLAAQRVGYVVA-SEKFIDAYNRVR  228 (335)
T ss_dssp             CCCHHHHHHHHHTTC-EEEEECTTHHHHCC--CCGGGGG-TCSSEEEEEESTTTTTCGGGCCEEEEE-CHHHHHHHHHHS
T ss_pred             CCCHHHHHHHHHhCC-EEEEECcchhhcch--hHHHHhh-hCCCEEEEecchhhcCCcccCeEEEEe-CHHHHHHHHHhc
Confidence            999999999999989 99999999764321  1111111 124567888999999744 45788887 443322111111


Q ss_pred             cccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCC
Q 037144          328 PQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG-VANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRN  406 (502)
Q Consensus       328 ~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~  406 (502)
                      ..|                          ....+..+++.+.+. .++++++.++..++++++.+.|++. ++++. ++.
T Consensus       229 ~~~--------------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~  280 (335)
T 1uu1_A          229 LPF--------------------------NVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREM-GYRIT-DSR  280 (335)
T ss_dssp             CTT--------------------------CSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH-TCCBC-CCC
T ss_pred             CCC--------------------------CcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-CcEEc-CCC
Confidence            001                          012233333333332 3467888888999999999999887 67654 445


Q ss_pred             eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHH
Q 037144          407 FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMES  486 (502)
Q Consensus       407 ~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~  486 (502)
                      .+++.+.++.  .                           ...++.+.|.++|..+.+     +..++|++++    +++
T Consensus       281 ~~~~~~~~~~--~---------------------------~~~~~~~~l~~~gi~v~~-----~~~~iRis~~----~~~  322 (335)
T 1uu1_A          281 GNFVFVFMEK--E---------------------------EKERLLEHLRTKNVAVRS-----FREGVRITIG----KRE  322 (335)
T ss_dssp             SSEEEEECCT--H---------------------------HHHHHHHHHHHHTEEEEE-----ETTEEEEECC----CHH
T ss_pred             CeEEEEECCC--C---------------------------CHHHHHHHHHHCCEEEEE-----CCCeEEEEeC----CHH
Confidence            5555555431  0                           123566677777865433     2358999985    346


Q ss_pred             HHHHHHHHHHHH
Q 037144          487 HVRAAWTVVQEH  498 (502)
Q Consensus       487 di~~~~~~l~~~  498 (502)
                      ++++++++|+++
T Consensus       323 ~i~~~~~~l~~~  334 (335)
T 1uu1_A          323 ENDMILRELEVF  334 (335)
T ss_dssp             HHHHHHHHHHCC
T ss_pred             HHHHHHHHHHhh
Confidence            899999988753

>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}

Probab=99.80  E-value=3.9e-18  Score=175.13  Aligned_cols=316  Identities=11%  Similarity=0.005  Sum_probs=189.7

Q ss_pred             cccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHH-HHHHHHHHHHHH-HhCccCC---CCeEEEe
Q 037144          106 LDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALL-CTLTAARDRVLK-KIGRENI---SKLVVYS  180 (502)
Q Consensus       106 ~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~-~al~~a~~~~~~-~~~~~~~---~~~~v~~  180 (502)
                      ..|....+..++++.+.+|+    |++.+       ..++|+|++++++ ..+..+...  + ..|....   .++.|++
T Consensus        70 ~~Y~~~~G~~~lr~~ia~~~----~~~~~-------~i~~t~G~~~al~l~~~~~~l~~--~~~~g~~~~~~~d~~~Vl~  136 (422)
T 3d6k_A           70 RNYGGLLGIADIRELWAEAL----GLPAD-------LVVAQDGSSLNIMFDLISWSYTW--GNNDSSRPWSAEEKVKWLC  136 (422)
T ss_dssp             TSSCCSSCCHHHHHHHHHHH----TCCGG-------GEEECSSCHHHHHHHHHHHHHHH--CCTTCSSCGGGSSCCEEEE
T ss_pred             hCCCCCCCCHHHHHHHHHHh----CCChh-------HEEEecchHHHHHHHHHHHHhcC--cccccccccccCCCCEEEE
Confidence            35655555677776665554    67654       5899999999873 333222211  0 0000000   0336888


Q ss_pred             CCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEE-EecCCccccccCChh---HHH
Q 037144          181 SDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLC-ATVGTTAITAVDPLK---PLC  256 (502)
Q Consensus       181 s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv-~t~gtt~~G~idpl~---eI~  256 (502)
                      ..++|..+..+++..|.   +++.+|+++  + .+|+++|++++++.     .+.+|+ .+.++|+||.+-|.+   +|+
T Consensus       137 ~~p~y~~~~~~~~~~g~---~~~~v~~~~--~-g~d~~~l~~~l~~~-----~~~~v~~~~~~~NPtG~~~~~~~l~~l~  205 (422)
T 3d6k_A          137 PVPGYDRHFTITEHFGF---EMINVPMTD--E-GPDMGVVRELVKDP-----QVKGMWTVPVFGNPTGVTFSEQTCRELA  205 (422)
T ss_dssp             EESCCHHHHHHHHHHTC---EEEEEEEET--T-EECHHHHHHHHTST-----TEEEEEECCSSCTTTCCCCCHHHHHHHH
T ss_pred             eCCccHHHHHHHHHcCC---EEEecCCCC--C-CCCHHHHHHHHhcC-----CCeEEEEcCCCCCCCCCCCCHHHHHHHH
Confidence            88899999999999999   999999975  2 39999999998641     133555 678999999998876   777


Q ss_pred             HHHH-HhCCEEEeecccccccccCc--cchhhh-----cCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCc
Q 037144          257 DVAK-QFGIWVHVDAAYAGSACICP--EFRHFI-----DGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNP  328 (502)
Q Consensus       257 ~i~~-~~g~~lhVDaA~g~~~~~~~--~~~~~~-----~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~  328 (502)
                      ++|+ +||+++++|.+|+...+..+  ......     .+....+.+..+++|+++....+|+++.+ +... +.+....
T Consensus       206 ~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~GlriG~~~~~-~~l~-~~l~~~~  283 (422)
T 3d6k_A          206 EMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKITHAGSGVSFFASS-KENI-EWYASHA  283 (422)
T ss_dssp             HCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTTSCTTSSCEEEECC-HHHH-HHHHHHH
T ss_pred             HHHhhccCCEEEEECCccccccCCCCCCCcChhhHhhccCCCCcEEEEcChhhhcCcccceEEEEeC-HHHH-HHHHHHH
Confidence            8887 99999999999974222111  111110     11224457778899995544568888875 3332 2221110


Q ss_pred             ccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcH-----HHHHHHHHHHHHHHHHHHHHHhc----CCCe
Q 037144          329 QYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGV-----ANLRNFIRSHVGMAKLFERLVTS----DKRF  399 (502)
Q Consensus       329 ~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~-----~g~~~~~~~~~~la~~l~~~l~~----~~~~  399 (502)
                      .....                       ....+..+++...+..     +.+++..+++.+.++++.+.|.+    .+++
T Consensus       284 ~~~~~-----------------------~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~  340 (422)
T 3d6k_A          284 NVRGI-----------------------GPNKLNQLAHAQFFGDVAGLKAHMLKHAASLAPKFERVLEILDSRLSEYGVA  340 (422)
T ss_dssp             HHHCS-----------------------CCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCE
T ss_pred             HhhcC-----------------------CCCHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCce
Confidence            00000                       0123444444444432     33445555555566666666643    4446


Q ss_pred             EEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeee-E-----CCEEE
Q 037144          400 EVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAI-V-----GGIYV  473 (502)
Q Consensus       400 ~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~-----~g~~~  473 (502)
                      ++..+....++++.+....                             ...+.+.+.+.|..+.+... +     .+..+
T Consensus       341 ~~~~p~~g~~~~~~~~~~~-----------------------------~~~~~~~l~~~gV~v~~~g~~f~~~~~~~~~~  391 (422)
T 3d6k_A          341 KWTSPTGGYFISVDVVPGT-----------------------------ASRVVELAKEAGIALTGAGSSFPLHNDPNNEN  391 (422)
T ss_dssp             EECCCSBSSCEEEEESTTC-----------------------------HHHHHHHHHHTTEECCCTTTTSGGGCCTTSCE
T ss_pred             EEeCCCcceEEEEECCCCC-----------------------------HHHHHHHHHHCCeEEEcCccccCCCCCCCCCe
Confidence            7654434445555553210                             23455666677865443122 2     13578


Q ss_pred             EEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          474 LRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       474 lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      +|++++.  +++++++++++.|+++.++
T Consensus       392 iRis~~~--~~~e~i~~~~~~l~~~l~~  417 (422)
T 3d6k_A          392 IRLAPSL--PPVAELEVAMDGFATCVLM  417 (422)
T ss_dssp             EEECCSS--SCHHHHHHHHHHHHHHHHH
T ss_pred             EEEecCC--CCHHHHHHHHHHHHHHHHH
Confidence            9999864  6778999999999887654

>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A

Probab=99.80  E-value=4.8e-18  Score=173.14  Aligned_cols=297  Identities=13%  Similarity=0.043  Sum_probs=178.0

Q ss_pred             HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcC
Q 037144          117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVG  196 (502)
Q Consensus       117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~G  196 (502)
                      ...++.+++++++|.+         ..++|+||++|+..++.+++.....+ +..+ ++.+|+.+...|.+...+....|
T Consensus        82 ~~~~l~~~la~~~~~~---------~v~~~~gg~~a~~~al~~~~~~~~~~-~~~g-~~~vi~~~~~y~~~~~~~~~~~~  150 (406)
T 4adb_A           82 PVLRLAKKLIDATFAD---------RVFFCNSGAEANEAALKLARKFAHDR-YGSH-KSGIVAFKNAFHGRTLFTVSAGG  150 (406)
T ss_dssp             HHHHHHHHHHHHSSCS---------EEEEESSHHHHHHHHHHHHHHHHHHH-TCTT-CCEEEEETTCCCCSSHHHHHHSS
T ss_pred             HHHHHHHHHHhhCCCC---------eEEEeCcHHHHHHHHHHHHHHHHHhc-CCCC-CcEEEEECCCcCCCcHHHhhccC
Confidence            4556778889998764         47999999999999998876532211 1110 23455555555555555555444


Q ss_pred             CCC---------CCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc-----CChhHHHHHHHHh
Q 037144          197 IDR---------KNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV-----DPLKPLCDVAKQF  262 (502)
Q Consensus       197 lg~---------~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i-----dpl~eI~~i~~~~  262 (502)
                      ...         ..+..+|.       .|+++|+++++++      +.+|+++ +.+++|.+     +++++|.++|++|
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~------~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~  216 (406)
T 4adb_A          151 QPAYSQDFAPLPADIRHAAY-------NDINSASALIDDS------TCAVIVE-PIQGEGGVVPASNAFLQGLRELCNRH  216 (406)
T ss_dssp             CGGGTGGGCSCCSSEEEECT-------TCHHHHHTTCSTT------EEEEEEC-SEETTTTSEECCHHHHHHHHHHHHHT
T ss_pred             CccccccCCCCCCCceEeCC-------CcHHHHHHHhcCC------eEEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHc
Confidence            210         14444443       3899999988633      3477777 78888754     5799999999999


Q ss_pred             CCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcc
Q 037144          263 GIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKE  342 (502)
Q Consensus       263 g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~  342 (502)
                      |+++|+|++|+++............++ ..|.+++  ||+++.+...|+++.++. .. +.+...   ....        
T Consensus       217 ~~~li~De~~~~~~~~g~~~~~~~~~~-~~d~~t~--sK~~~~G~r~G~~~~~~~-~~-~~~~~~---~~~~--------  280 (406)
T 4adb_A          217 NALLIFDEVQTGVGRTGELYAYMHYGV-TPDLLTT--AKALGGGFPVGALLATEE-CA-RVMTVG---THGT--------  280 (406)
T ss_dssp             TCEEEEECTTTTTTTTSSSSHHHHHTC-CCSEEEE--CGGGGTTSCCEEEEECHH-HH-HTCCTT---SSCC--------
T ss_pred             CCEEEEeccccCCCccchhHHHHhcCC-CCCEEEe--chhhcCCCCeEEEEEcHH-HH-hhhccC---CcCC--------
Confidence            999999999975433221111111122 4677765  999985566888776433 22 222111   0000        


Q ss_pred             cccCCCcccccCCCCCCchHHH---HHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC----CeEEecCCCeeEEEEEee
Q 037144          343 QEVGYKDWQITLCRRFRSLKLW---VVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK----RFEVAFPRNFSLVCFRVT  415 (502)
Q Consensus       343 ~~~~~~~~~~~~sr~~~al~~~---~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~----~~~l~~~~~~~~v~f~~~  415 (502)
                              +.    ....+...   .+++.+..   .++.++..++++++.+.|+++.    .+.-. +....++.+.+.
T Consensus       281 --------~~----~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~  344 (406)
T 4adb_A          281 --------TY----GGNPLASAVAGKVLELINT---PEMLNGVKQRHDWFVERLNTINHRYGLFSEV-RGLGLLIGCVLN  344 (406)
T ss_dssp             --------SS----TTCHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE-EEETTEEEEEEC
T ss_pred             --------CC----CCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCceEE-EEEEEEEEEEEe
Confidence                    00    01223333   33333322   5677788888888888887641    11111 112345566654


Q ss_pred             cCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHH
Q 037144          416 PSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVV  495 (502)
Q Consensus       416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l  495 (502)
                      ...                          .....++.+.+.++|..+.+    .+..++|++++ ..+++++++++++.|
T Consensus       345 ~~~--------------------------~~~~~~~~~~l~~~gi~v~~----~~~~~iRi~~~-~~~~~e~i~~~~~~l  393 (406)
T 4adb_A          345 ADY--------------------------AGQAKQISQEAAKAGVMVLI----AGGNVVRFAPA-LNVSEEEVTTGLDRF  393 (406)
T ss_dssp             TTT--------------------------TTCHHHHHHHHHHTTEECEE----SSTTEEEECCC-TTCCHHHHHHHHHHH
T ss_pred             CCc--------------------------HHHHHHHHHHHHHCCcEEee----cCCCeEEEECC-CCCCHHHHHHHHHHH
Confidence            320                          00134667777778865433    23568999864 557788999999999


Q ss_pred             HHHHHh
Q 037144          496 QEHLEA  501 (502)
Q Consensus       496 ~~~~~~  501 (502)
                      +++.++
T Consensus       394 ~~~l~~  399 (406)
T 4adb_A          394 AAACEH  399 (406)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            988754

>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}

Probab=99.80  E-value=2.7e-17  Score=168.66  Aligned_cols=297  Identities=10%  Similarity=-0.005  Sum_probs=180.7

Q ss_pred             HHHHHHHHHHHhcCCC-CccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEe-CCCCchhHHHHHHH
Q 037144          117 LENIVMDWLGQMLDLP-KSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYS-SDQTHCAFQKAAQI  194 (502)
Q Consensus       117 le~~~~~~l~~l~g~~-~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~-s~~~H~s~~~aa~~  194 (502)
                      ...++.+.+++++|.+ .+       ..++|+||++|+..++.+++..          .+..|++ ....|.+...++..
T Consensus        87 ~~~~l~~~la~~~~~~~~~-------~v~~~~gg~ea~~~ai~~~~~~----------~~~~vi~~~p~yh~~~~~~~~~  149 (419)
T 2eo5_A           87 PQLELAKKLVTYSPGNFQK-------KVFFSNSGTEAIEASIKVVKNT----------GRKYIIAFLGGFHGRTFGSISL  149 (419)
T ss_dssp             HHHHHHHHHHHHSSCSSCE-------EEEEESSHHHHHHHHHHHHHTT----------SCCEEEEETTCCCCSSHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCcCC-------EEEEeCchHHHHHHHHHHHHHh----------hCCcEEEECCCcCCCCHhhHhh
Confidence            3455667889999875 33       5899999999999998877642          1334444 44556555555544


Q ss_pred             cCC------C----CCCEEEEecCCCCCcc----------------cCHHHHH-HHHHHHHhcCCccEEEEEecCCcccc
Q 037144          195 VGI------D----RKNIRAIKTTKSSSYG----------------LSAESVL-SQINLDVEAELIPLFLCATVGTTAIT  247 (502)
Q Consensus       195 ~Gl------g----~~~v~~v~~~~~~~~~----------------~d~~~Le-~~i~~~~~~g~~p~~Vv~t~gtt~~G  247 (502)
                      .|.      +    ...++.+|.+.  +++                +|+++|+ ++|++.. ....+.+|+++...+++|
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~g~~~~~~~~~~~~~~~~~l~~~~i~~~~-~~~~~~~vi~~p~~~~tG  226 (419)
T 2eo5_A          150 TASKAVQRSIVGPFMPGVIHVPYPN--PYRNPWHINGYENPSELVNRVIEFIEDYIFVNLV-PPEEVAGIFFEPIQGEGG  226 (419)
T ss_dssp             CCSCGGGGCSSCCCCTTEEEECCCC--SSSCTTCCCTTTCHHHHHHHHHHHHHHTHHHHTC-CGGGEEEEEECSSBTTTT
T ss_pred             cCCccccccccCCCCCCCEEECCCc--cccccccccccccchhhHHHHHHHHHHHHHhhcc-CCCCEEEEEEeCccCCCC
Confidence            331      1    12678888753  222                4789999 8887420 001234566655556689


Q ss_pred             ccCC----hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhh
Q 037144          248 AVDP----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLS  322 (502)
Q Consensus       248 ~idp----l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~  322 (502)
                      .+-|    +++|+++|++||+++|+|++|.++............++ ..|.++  +.|+++.+ .+.|+++.++. ..  
T Consensus       227 ~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~~~~~~~~~-~~d~~t--~sK~~~~G~~riG~~~~~~~-~~--  300 (419)
T 2eo5_A          227 YVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKLFAIENFNT-VPDVIT--LAKALGGGIMPIGATIFRKD-LD--  300 (419)
T ss_dssp             SBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEE--ECGGGGTTTSCCEEEEEEGG-GC--
T ss_pred             CccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcchhhHHhcCC-CCCEEE--ecccccCCccceEEEEEchH-hh--
Confidence            8666    99999999999999999999976532211111011122 457665  55998877 78899888653 21  


Q ss_pred             hhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144          323 TLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA  402 (502)
Q Consensus       323 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~  402 (502)
                      .+.   .....                 +.    ....+.+.+++..+.  .+.+..++..+++++|.+.|+++  +..+
T Consensus       301 ~~~---~~~~~-----------------t~----~~n~~~~~aa~aal~--~~~~~~~~~~~~~~~l~~~L~~~--~~~~  352 (419)
T 2eo5_A          301 FKP---GMHSN-----------------TF----GGNALACAIGSKVID--IVKDLLPHVNEIGKIFAEELQGL--ADDV  352 (419)
T ss_dssp             CC--------------------------CC----CCCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTTS--SSEE
T ss_pred             cCC---cccCC-----------------CC----CCCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHh--hhhe
Confidence            121   00000                 00    012333333333331  12237788889999999999876  2222


Q ss_pred             cCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCC
Q 037144          403 FPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSM  482 (502)
Q Consensus       403 ~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~  482 (502)
                       ++..+++.+.+.+.                           ..... +.+.+.++|.++.+.    +..++|+++. ..
T Consensus       353 -~~~g~~~~i~~~~~---------------------------~~~~~-~~~~l~~~Gv~v~~~----~~~~lRis~~-~~  398 (419)
T 2eo5_A          353 -RGIGLAWGLEYNEK---------------------------KVRDR-IIGESFKRGLLLLPA----GRSAIRVIPP-LV  398 (419)
T ss_dssp             -EEETTEEEEECSCH---------------------------HHHHH-HHHHHHHTTEECEEE----TTTEEEECCC-TT
T ss_pred             -EeeeEEEEEEEecC---------------------------ccHHH-HHHHHHHCCCEEecC----CCCEEEEECC-CC
Confidence             23345666655321                           11234 777777778654433    2458999874 45


Q ss_pred             CcHHHHHHHHHHHHHHHHh
Q 037144          483 TMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       483 t~~~di~~~~~~l~~~~~~  501 (502)
                      ++++++++++++|+++.++
T Consensus       399 ~t~e~i~~~l~~l~~~l~~  417 (419)
T 2eo5_A          399 ISEEEAKQGLDILKKVIKV  417 (419)
T ss_dssp             CCHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHh
Confidence            6788999999999988765

>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*

Probab=99.79  E-value=1.8e-18  Score=174.79  Aligned_cols=296  Identities=13%  Similarity=0.045  Sum_probs=177.2

Q ss_pred             HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCC---CchhHHHH
Q 037144          115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQ---THCAFQKA  191 (502)
Q Consensus       115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~---~H~s~~~a  191 (502)
                      ..+++++.+++++++|.++..      ..++++|||+|+..++.+.             +++.|+++..   .|+++...
T Consensus        57 ~~~~~~~~~~~a~~~g~~~~~------~~~~~~ggt~a~~~~~~~~-------------~gd~Vl~~~~~y~~~~~~~~~  117 (374)
T 2aeu_A           57 SYFAEKVNEYGLKHLGGDEND------KCVGFNRTSSAILATILAL-------------KPKKVIHYLPELPGHPSIERS  117 (374)
T ss_dssp             HHHHHHHHHHHHHHHTCCTTE------EEEEESSHHHHHHHHHHHH-------------CCSEEEEECSSSSCCTHHHHH
T ss_pred             hHHHHHHHHHHHHHhCCCCcc------eEEEEcChHHHHHHHHHhC-------------CCCEEEEecCCCCccHHHHHH
Confidence            456778888889999984211      5799999999998887754             2456667766   46666667


Q ss_pred             HHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEE-EEEecCCcccc-ccCChhHHHHHHHHhCCEEEee
Q 037144          192 AQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLF-LCATVGTTAIT-AVDPLKPLCDVAKQFGIWVHVD  269 (502)
Q Consensus       192 a~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~-Vv~t~gtt~~G-~idpl~eI~~i~~~~g~~lhVD  269 (502)
                      ++..|+   +++.+         +|+++|+++ ++      .+.+ |+++.++|++| ...|+++|.++|++||+++|+|
T Consensus       118 ~~~~g~---~~~~v---------~d~~~l~~~-~~------~~~~~v~~~~p~nptG~~~~~l~~i~~l~~~~~~~li~D  178 (374)
T 2aeu_A          118 CKIVNA---KYFES---------DKVGEILNK-ID------KDTLVIITGSTMDLKVIELENFKKVINTAKNKEAIVFVD  178 (374)
T ss_dssp             HHHTTC---EEEEE---------SCHHHHHTT-CC------TTEEEEEECBCTTSCBCCHHHHHHHHHHHHHHTCCEEEE
T ss_pred             HHHcCc---EEEEe---------CCHHHHHhc-CC------CccEEEEEccCCCCCCCCcccHHHHHHHHHHcCCEEEEE
Confidence            888898   88777         278888876 32      2446 78888999999 8999999999999999999999


Q ss_pred             cccccccc-cCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCC
Q 037144          270 AAYAGSAC-ICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYK  348 (502)
Q Consensus       270 aA~g~~~~-~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~  348 (502)
                      ++|+.+.. ..... ....  .++|.++.++||+++++ +.|+++.++ .... .+.....+...               
T Consensus       179 e~~~~~~~~~~~~~-~~~~--~~~di~~~S~sK~l~g~-~~G~~~~~~-~~~~-~l~~~~~~~~~---------------  237 (374)
T 2aeu_A          179 DASGARVRLLFNQP-PALK--LGADLVVTSTDKLMEGP-RGGLLAGKK-ELVD-KIYIEGTKFGL---------------  237 (374)
T ss_dssp             CTTHHHHHHHTTCC-CHHH--HTCSEEEEETTSSSSSC-SCEEEEEEH-HHHH-HHHHHHHTTTC---------------
T ss_pred             CCcccccccccccC-Cccc--cCCcEEEecCcccccCc-ceEEEEECH-HHHH-HHHHhhccccC---------------
Confidence            99977641 11010 0111  15799999999998764 788877754 3222 22110000000               


Q ss_pred             cccccCCCCCCchHH---HHHHHHhcHHHHHHHHHHHHHH----HHHHHHHHhcC---CCeEEecCCCeeEEEEEeecCc
Q 037144          349 DWQITLCRRFRSLKL---WVVIRNFGVANLRNFIRSHVGM----AKLFERLVTSD---KRFEVAFPRNFSLVCFRVTPSA  418 (502)
Q Consensus       349 ~~~~~~sr~~~al~~---~~~l~~~g~~g~~~~~~~~~~l----a~~l~~~l~~~---~~~~l~~~~~~~~v~f~~~~~~  418 (502)
                              ....+.+   ..+++.+..+.+++..++...+    .+.+.+.|..+   +++.+..++. +.+.+......
T Consensus       238 --------~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~-g~~~~~~~~~~  308 (374)
T 2aeu_A          238 --------EAQPPLLAGIYRALKNFNLERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPT-GFVIKRVYKDD  308 (374)
T ss_dssp             --------BCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSS-EEEEEEEESSH
T ss_pred             --------CCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcceeeCCc-eEEEEeecccc
Confidence                    0122223   3344433332344444444444    45556656554   3566543444 33333322110


Q ss_pred             chhhhhhcccCCCcccccccchhHhhHHHHHHHHHHH-HhcCcEEEEeeeE-CCEEEEEEEecCCCCcHHHHHHHHHHHH
Q 037144          419 VMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESI-NVSGKVFMTHAIV-GGIYVLRFAAGNSMTMESHVRAAWTVVQ  496 (502)
Q Consensus       419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~g~~~~~~~~~-~g~~~lR~~~~~~~t~~~di~~~~~~l~  496 (502)
                                            ...... ..++..++ .+.|.++.++..+ .+..++|++++.....+.+++++.++|+
T Consensus       309 ----------------------~~~~~~-~~~~~~~ll~~~gV~v~~g~~~~~~~~~lRi~~~~~~~~~~~l~~l~~~l~  365 (374)
T 2aeu_A          309 ----------------------TINIKK-LIEIGFNLLKNYGIITITVAGMPGASKSLRIDLTSRDAERIDDNYIIKAIV  365 (374)
T ss_dssp             ----------------------HHHHHH-HHHHHHHHHHHHCEECSTTSSSCSSCCSEEEETTSGGGGGSCHHHHHHHHH
T ss_pred             ----------------------cccccc-hHHHHHHHHHhCCEEEecCCCCCCCCCeEEEEcCCchHHHHHHHHHHHHHH
Confidence                                  000001 11233333 3457654433222 2345899999765555556999999998


Q ss_pred             HHHHh
Q 037144          497 EHLEA  501 (502)
Q Consensus       497 ~~~~~  501 (502)
                      +++++
T Consensus       366 ~~l~~  370 (374)
T 2aeu_A          366 ESIKM  370 (374)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            87764

>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*

Probab=99.79  E-value=6e-18  Score=173.64  Aligned_cols=301  Identities=12%  Similarity=0.030  Sum_probs=182.7

Q ss_pred             HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCC-eEEEeCCCCchhHHHHHHH
Q 037144          116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISK-LVVYSSDQTHCAFQKAAQI  194 (502)
Q Consensus       116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~-~~v~~s~~~H~s~~~aa~~  194 (502)
                      +...++.+++++++|.+         .+++|+||++|+..++.+++.....+ +..  ++ .+|+.+...|.+...++..
T Consensus        99 ~~~~~l~~~la~~~g~~---------~v~~~~ggteA~~~al~~~~~~~~~~-~~~--g~~~vi~~~~~yh~~~~~~~~~  166 (420)
T 2pb2_A           99 EPALRLGRKLIDATFAE---------RVLFMNSGTEANETAFKLARHYACVR-HSP--FKTKIIAFHNAFHGRSLFTVSV  166 (420)
T ss_dssp             HHHHHHHHHHHHHSSCS---------EEEEESSHHHHHHHHHHHHHHHHHHH-TCT--TCCEEEEETTCCCCSSHHHHHH
T ss_pred             HHHHHHHHHHHhhCCCC---------eEEEeCCHHHHHHHHHHHHHHHhhhc-cCC--CCCEEEEEeCCcCCcCHHHHHh
Confidence            45566777888888742         58999999999999999887642211 111  23 3444455556666666666


Q ss_pred             cCCC---------CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc----cCChhHHHHHHHH
Q 037144          195 VGID---------RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA----VDPLKPLCDVAKQ  261 (502)
Q Consensus       195 ~Glg---------~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~----idpl~eI~~i~~~  261 (502)
                      .|..         ...+..+|.       .|+++|+++|+++      +.+|+++...+++|.    .+++++|.++|++
T Consensus       167 ~g~~~~~~~~~p~~~~~~~~~~-------~d~~~le~~i~~~------~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~  233 (420)
T 2pb2_A          167 GGQPKYSDGFGPKPADIIHVPF-------NDLHAVKAVMDDH------TCAVVVEPIQGEGGVQAATPEFLKGLRDLCDE  233 (420)
T ss_dssp             SSCHHHHTTSSSCCSCEEEECT-------TCHHHHHHHCCTT------EEEEEECSEETTTTSEECCHHHHHHHHHHHHH
T ss_pred             cCCccccccCCCCCCCeEEecC-------CCHHHHHHHhccC------ceEEEEeCCcCCCCeecCCHHHHHHHHHHHHH
Confidence            5541         012555553       2899999988643      347777776666675    3789999999999


Q ss_pred             hCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCc
Q 037144          262 FGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPK  341 (502)
Q Consensus       262 ~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~  341 (502)
                      ||+++++|++|.++............++ ..|.+++  +|+++.+...|+++++++ . .+.+...  .  ..       
T Consensus       234 ~gi~lI~Dev~~g~~~~g~~~~~~~~~~-~~diit~--sK~l~~G~~iG~~~~~~~-l-~~~l~~~--~--~~-------  297 (420)
T 2pb2_A          234 HQALLVFDEVQCGMGRTGDLFAYMHYGV-TPDILTS--AKALGGGFPVSAMLTTQE-I-ASAFHVG--S--HG-------  297 (420)
T ss_dssp             TTCEEEEECTTTTTTTTSSSSHHHHHTC-CCSEEEE--CGGGGTTSCCEEEEECHH-H-HTTCC--------C-------
T ss_pred             cCCEEEEEcCCcCcccCCcHHHHHhcCC-CCCeEEe--cccccCCCceEEEEEhHH-H-HHhhcCC--C--cC-------
Confidence            9999999999965432211111111122 4687754  799987777999888653 2 2222110  0  00       


Q ss_pred             ccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEecCCCeeEEEEEeecC
Q 037144          342 EQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD----KRFEVAFPRNFSLVCFRVTPS  417 (502)
Q Consensus       342 ~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~----~~~~l~~~~~~~~v~f~~~~~  417 (502)
                       .       ++ ......+..+..+++.+..   +++.++..++++++.+.|+++    |.+..+ ++..+++.+.+...
T Consensus       298 -~-------t~-~~~~~~~aa~~a~L~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~g~~~~v~~~~~  364 (420)
T 2pb2_A          298 -S-------TY-GGNPLACAVAGAAFDIINT---PEVLQGIHTKRQQFVQHLQAIDEQFDIFSDI-RGMGLLIGAELKPK  364 (420)
T ss_dssp             -C-------EE-CCCHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE-EEETTEEEEEECGG
T ss_pred             -c-------cc-CcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-EecceEEEEEECCC
Confidence             0       01 0111122333444554433   356777888888888888764    433322 23345666665421


Q ss_pred             cchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHH
Q 037144          418 AVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQE  497 (502)
Q Consensus       418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~  497 (502)
                      .                          .....++.+.+.++|.++.+.    +..++|+++. ...++++++++++.|++
T Consensus       365 ~--------------------------~~~~~~l~~~l~~~Gi~v~~~----~~~~iRl~~~-~~~t~eei~~~~~~l~~  413 (420)
T 2pb2_A          365 Y--------------------------KGRARDFLYAGAEAGVMVLNA----GADVMRFAPS-LVVEEADIHEGMQRFAQ  413 (420)
T ss_dssp             G--------------------------TTCHHHHHHHHHHTTEECEES----STTEEEECCC-TTCCHHHHHHHHHHHHH
T ss_pred             c--------------------------hHHHHHHHHHHHHCCCEEEeC----CCCEEEEECC-CCCCHHHHHHHHHHHHH
Confidence            0                          001245677777778644332    2458999974 45678899999999998


Q ss_pred             HHHh
Q 037144          498 HLEA  501 (502)
Q Consensus       498 ~~~~  501 (502)
                      +.++
T Consensus       414 ~l~~  417 (420)
T 2pb2_A          414 AVGK  417 (420)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7654

>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*

Probab=99.79  E-value=2.2e-17  Score=169.86  Aligned_cols=307  Identities=10%  Similarity=-0.015  Sum_probs=181.4

Q ss_pred             HHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCC-CCchhHHHHHHHcC
Q 037144          118 ENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSD-QTHCAFQKAAQIVG  196 (502)
Q Consensus       118 e~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~-~~H~s~~~aa~~~G  196 (502)
                      ..++.+.++++++.+.+       ..+||+||++|+..++.+++... +..|   .++..|++++ ..|.+...++...|
T Consensus        88 ~~~l~~~la~~~~~~~~-------~v~~~~ggtea~~~ai~~~~~~~-~~~g---~~~~~vi~~~~~yh~~~~~~~~~~~  156 (429)
T 1s0a_A           88 AIELCRKLVAMTPQPLE-------CVFLADSGSVAVEVAMKMALQYW-QAKG---EARQRFLTFRNGYHGDTFGAMSVCD  156 (429)
T ss_dssp             HHHHHHHHHHHSCTTCC-------EEEEESSHHHHHHHHHHHHHHHH-HHHT---CCCCEEEEETTCCCCSSHHHHTTSC
T ss_pred             HHHHHHHHHHhCCCCCC-------EEEEeCCHHHHHHHHHHHHHHHh-cccC---CCCCeEEEECCCCCCCchhhhhhcC
Confidence            34455678888876543       68999999999999998776421 1111   1244555555 45655444443333


Q ss_pred             CC----------CCCEEEEecCCC----CCcccCHHHHHHHHHHHHhcCCccEEEEEecC-CccccccCC----hhHHHH
Q 037144          197 ID----------RKNIRAIKTTKS----SSYGLSAESVLSQINLDVEAELIPLFLCATVG-TTAITAVDP----LKPLCD  257 (502)
Q Consensus       197 lg----------~~~v~~v~~~~~----~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~g-tt~~G~idp----l~eI~~  257 (502)
                      ..          ...++.++++..    ..+.+|+++|+++|++..   ..+.+|+++.. ++++|.+-|    +++|++
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~---~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~  233 (429)
T 1s0a_A          157 PDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHR---HEIAAVIIEPIVQGAGGMRMYHPEWLKRIRK  233 (429)
T ss_dssp             TTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHHHT---TTEEEEEECSSEECTTTCEEBCTHHHHHHHH
T ss_pred             CchhhcccccCCCCCceEeCCCcccccccchHHHHHHHHHHHHhCC---CCEEEEEEeecccCCCCcccCCHHHHHHHHH
Confidence            10          114566776421    113689999999997521   12346666655 688998766    999999


Q ss_pred             HHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCC--cccccCc
Q 037144          258 VAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTN--PQYLKNE  334 (502)
Q Consensus       258 i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~--~~yl~~~  334 (502)
                      +|++||+++|+|++|.++............++ ..|.++++  |+++.+ .+.|+++.++ ... +.+...  ..+... 
T Consensus       234 l~~~~~~~li~De~~~~~g~~g~~~~~~~~~~-~~d~~t~s--K~l~~G~~~iG~~~~~~-~~~-~~l~~~~~~~~~~~-  307 (429)
T 1s0a_A          234 ICDREGILLIADEIATGFGRTGKLFACEHAEI-APDILCLG--KALTGGTMTLSATLTTR-EVA-ETISNGEAGCFMHG-  307 (429)
T ss_dssp             HHHHHTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGGTSSSCCEEEEECH-HHH-HHHHTSTTSSCSCC-
T ss_pred             HHHHcCCEEEEeehhhCCcccchHHHhhhcCC-CCCEEEec--ccccCCCccceEEEeCH-HHH-HHhhcCCCcccccC-
Confidence            99999999999999976422111110001122 46777654  998877 7899988764 332 223211  000000 


Q ss_pred             cCCCCCcccccCCCcccccCCCCCCchH---HHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCeEEecCCCee
Q 037144          335 ATDQEPKEQEVGYKDWQITLCRRFRSLK---LWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD---KRFEVAFPRNFS  408 (502)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~~sr~~~al~---~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~---~~~~l~~~~~~~  408 (502)
                                         .+-....+.   +.++++.+..   .+..++..++++++.+.|+++   |++..+ ++..+
T Consensus       308 -------------------~t~~~n~~~~~a~~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~-~~~g~  364 (429)
T 1s0a_A          308 -------------------PTFMGNPLACAAANASLAILES---GDWQQQVADIEVQLREQLAPARDAEMVADV-RVLGA  364 (429)
T ss_dssp             -------------------CTTTTCHHHHHHHHHHHHHHHT---CHHHHHHHHHHHHHHHHHGGGGGCTTEEEE-EEETT
T ss_pred             -------------------CCCCCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHhcCCCEEEE-EEeeE
Confidence                               000112233   3334443322   245677788899999999775   566533 22334


Q ss_pred             EEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHH
Q 037144          409 LVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHV  488 (502)
Q Consensus       409 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di  488 (502)
                      ++.+.+... .                         +  ..++.+.|.++|.+ +.+.   + .++|+++. ..++++++
T Consensus       365 ~~~~~~~~~-~-------------------------~--~~~l~~~l~~~Gi~-v~~~---~-~~iRis~~-~~~t~e~i  410 (429)
T 1s0a_A          365 IGVVETTHP-V-------------------------N--MAALQKFFVEQGVW-IRPF---G-KLIYLMPP-YIILPQQL  410 (429)
T ss_dssp             EEEEEESSC-B-------------------------C--HHHHHHHHHHTTEE-CCCB---T-TEEEECCC-TTCCHHHH
T ss_pred             EEEEEECCc-c-------------------------c--HHHHHHHHHHCCCE-Eecc---C-CEEEEECC-CCCCHHHH
Confidence            566655321 0                         0  23566677777864 3332   2 58999964 45678899


Q ss_pred             HHHHHHHHHHHHh
Q 037144          489 RAAWTVVQEHLEA  501 (502)
Q Consensus       489 ~~~~~~l~~~~~~  501 (502)
                      ++++++|+++.++
T Consensus       411 ~~~~~~l~~~~~~  423 (429)
T 1s0a_A          411 QRLTAAVNRAVQD  423 (429)
T ss_dssp             HHHHHHHHHHTSS
T ss_pred             HHHHHHHHHHHHh
Confidence            9999999987643

>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}

Probab=99.79  E-value=3.9e-18  Score=174.22  Aligned_cols=354  Identities=12%  Similarity=0.020  Sum_probs=206.5

Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCcccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCC--C
Q 037144           56 VETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLP--K  133 (502)
Q Consensus        56 ~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~--~  133 (502)
                      .-.+.+.+.+.-.+...+.....|+++...+.     +.+.+..........|...++..++++.+.+|+....+.+  .
T Consensus        28 i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~-----v~~a~~~a~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~  102 (409)
T 4eu1_A           28 ILGLGQDFRMDPAKRKVNLSIGVYRDDADQPF-----VLECVKQATLGTNMDYAPVTGIASFVEEAQKLCFGPTCAALRD  102 (409)
T ss_dssp             HHHHHHHHHHCCCSSCEECCCSSCCCTTSCCC-----CCHHHHTCCCCSCCCCCCTTCCHHHHHHHHHHHHCSSCHHHHT
T ss_pred             HHHHHHHHhhCCCcCceeeeeeEEECCCCCEe-----ecHHHHhcCccccccCCCCCCcHHHHHHHHHHHcCCCchhhcc
Confidence            34555555544333333333333333322222     3334444443444566666677888888888873222111  2


Q ss_pred             ccCcCCCCcE--EEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCC
Q 037144          134 SFLFSGNGGG--VIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSS  211 (502)
Q Consensus       134 ~~~~~~~~~g--~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~  211 (502)
                      +       ..  ..|.||+.++..+....+.. .       .+++.|+++..+|.++...++..|.   +++.+|++.++
T Consensus       103 ~-------~i~~~~~~~g~ga~~~~~~~~~~~-~-------~~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~~~~~~~~  164 (409)
T 4eu1_A          103 G-------RIASCQTLGGTGALRIGGDLLNRF-V-------ANCNRIYGPDVGYPNHESIFAKAGM---ELTPYSYYDPA  164 (409)
T ss_dssp             T-------CEEEEEESHHHHHHHHHHHHGGGT-S-------SSCCEEEEESSCCTHHHHHHHHTTC---EEEEECCEETT
T ss_pred             C-------ceeeeecccchHHHHHHHHHHHHh-c-------CCCCEEEEeCCCcHhHHHHHHHcCC---eEEEEEeecCc
Confidence            1       34  34888888886554333211 0       1567889999999999999999999   99999985334


Q ss_pred             CcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hhHHHHHHHHhCCEEEeecccccccccCc--cchhh-
Q 037144          212 SYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICP--EFRHF-  285 (502)
Q Consensus       212 ~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~--~~~~~-  285 (502)
                      ++.+|+++|++++++..   ....+++.+.++|+||.+-+   +++|+++|++||+++++|.+|+.+.....  ..... 
T Consensus       165 ~~~~d~~~l~~~l~~~~---~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~  241 (409)
T 4eu1_A          165 TKGLNLAGMLECLDKAP---EGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPR  241 (409)
T ss_dssp             TTEECHHHHHHHHHHSC---TTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHH
T ss_pred             CCcCcHHHHHHHHHhCC---CCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHH
Confidence            67999999999997521   12456777889999999976   55599999999999999999987654321  01111 


Q ss_pred             -hcCCCCCC-eeEEccCCcCCCC-CcceEE--EeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCc
Q 037144          286 -IDGVECVD-SFSFNPHKWLFTT-LDCCCL--WVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRS  360 (502)
Q Consensus       286 -~~~~~~aD-si~~~~hK~l~~p-~~~g~~--~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~a  360 (502)
                       +.+. ..+ .++.+++|.++.| ..+|++  ++.++............+.....                 .+   ...
T Consensus       242 ~~~~~-~~~~i~~~S~SK~~g~~G~riG~~~~v~~~~~~~~~l~~~~~~~~~~~~-----------------~~---~~~  300 (409)
T 4eu1_A          242 HLVDM-VPNLIVAQSFSKNFGLYGHRCGALHISTASAEEAKRLVSQLALLIRPMY-----------------NN---PPL  300 (409)
T ss_dssp             HHHTT-SSCCEEEEECTTTSSCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHHHH-----------------SS---CCH
T ss_pred             HHHhh-CCcEEEEecCcccccCccCCceEEEEEeCCHHHHHHHHHHHHHHHhhhc-----------------CC---CCh
Confidence             1111 223 4556789999744 456776  56665421111100000000000                 00   022


Q ss_pred             hHHHHHHHHhc--------HHHHHHHHHHHHHHHHHHHHHHhcCCC---eEEecCCCeeEEEEEeecCcchhhhhhcccC
Q 037144          361 LKLWVVIRNFG--------VANLRNFIRSHVGMAKLFERLVTSDKR---FEVAFPRNFSLVCFRVTPSAVMDKLRTKYKN  429 (502)
Q Consensus       361 l~~~~~l~~~g--------~~g~~~~~~~~~~la~~l~~~l~~~~~---~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~  429 (502)
                      +..+++...+.        .+.++++.+++.++++++.+.|++.+.   +++. ++..+++.|.  ...           
T Consensus       301 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~-~~~~~~~~~~--~~~-----------  366 (409)
T 4eu1_A          301 YGAWVVSSILKDPQLTALWKKELKQMSSRIAEVRKRLVSELKACGSVHDWSHI-ERQVGMMAYT--GLT-----------  366 (409)
T ss_dssp             HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHH-HHSCSSEEEC--CCC-----------
T ss_pred             HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccee-cCCceEEEEe--CCC-----------
Confidence            33333333332        334677888899999999999988731   5544 3445555552  110           


Q ss_pred             CCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144          430 GTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHL  499 (502)
Q Consensus       430 ~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~  499 (502)
                                     .    ++.+++. +.|.. +.+.       .|++++. .++ ++|++++++|+++.
T Consensus       367 ---------------~----~~~~~ll~~~gv~-v~p~-------~Ri~~~~-~~~-~~i~~~~~~l~~~l  408 (409)
T 4eu1_A          367 ---------------R----EQVELLRSEYHIY-MTLN-------GRAAVSG-LNS-TNVEYVSQAIHNVT  408 (409)
T ss_dssp             ---------------H----HHHHHHHHHHCEE-CCTT-------CEEEGGG-CCT-TTHHHHHHHHHHHH
T ss_pred             ---------------H----HHHHHHHHcCCEE-EcCC-------CEEEEEe-cCH-hhHHHHHHHHHHHh
Confidence                           1    1233333 34653 3332       3888864 344 47999999998875

>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A

Probab=99.79  E-value=4.5e-17  Score=167.74  Aligned_cols=303  Identities=8%  Similarity=-0.032  Sum_probs=168.9

Q ss_pred             HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCC-CCchhHHHHHHH
Q 037144          116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSD-QTHCAFQKAAQI  194 (502)
Q Consensus       116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~-~~H~s~~~aa~~  194 (502)
                      +...++.+.+++++|.+         .++|++||++|+..++.+++.......|.. .++..|++.+ ..|.+...++.+
T Consensus       107 ~~~~~l~~~la~~~g~~---------~v~~~~sGseA~~~al~~a~~~~~~~~g~~-~gr~~vi~~~~~yhg~~~~~~~~  176 (433)
T 1z7d_A          107 VPLGICERYLTNLLGYD---------KVLMMNTGAEANETAYKLCRKWGYEVKKIP-ENMAKIVVCKNNFSGRTLGCISA  176 (433)
T ss_dssp             HHHHHHHHHHHHHHTCS---------EEEEESSHHHHHHHHHHHHHHHHHHTSCCC-TTCCEEEEETTC-----------
T ss_pred             HHHHHHHHHHHhhcCCC---------eEEEeCCHHHHHHHHHHHHHHHhhhccCCC-CCCCeEEEEeCCcCCcchhhhcc
Confidence            34445566677777742         589999999999999998875321111100 0224555544 445555555554


Q ss_pred             cCC-------C--CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC----ChhHHHHHHHH
Q 037144          195 VGI-------D--RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD----PLKPLCDVAKQ  261 (502)
Q Consensus       195 ~Gl-------g--~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id----pl~eI~~i~~~  261 (502)
                      .|.       +  ...++.+|.       .|+++|+++|+.     ..+.+|+++...+++|.+-    ++++|.++|++
T Consensus       177 ~g~~~~~~~~~p~~~~v~~~~~-------~d~~~le~~l~~-----~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~  244 (433)
T 1z7d_A          177 STTKKCTSNFGPFAPQFSKVPY-------DDLEALEEELKD-----PNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKK  244 (433)
T ss_dssp             ---------------CEEEECT-------TCHHHHHHHHTS-----TTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHH
T ss_pred             cCCccccccCCCCCCCeEEeCC-------CCHHHHHHHhCC-----CCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHH
Confidence            441       0  014555553       289999999851     1244677666566688764    79999999999


Q ss_pred             hCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCcccccCccCCCCC
Q 037144          262 FGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEP  340 (502)
Q Consensus       262 ~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~  340 (502)
                      ||++|++|++|.++......+.....++ ..|.++  ++|+++.. ...|+++.++ ... +.+...  .  ..      
T Consensus       245 ~g~llI~DEv~~g~g~~g~~~~~~~~~~-~~di~t--~sK~l~~G~~~~G~v~~~~-~~~-~~l~~~--~--~~------  309 (433)
T 1z7d_A          245 YNVLFVADEVQTGLGRTGKLLCVHHYNV-KPDVIL--LGKALSGGHYPISAVLAND-DIM-LVIKPG--E--HG------  309 (433)
T ss_dssp             TTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEE--ECGGGGTTSSCCEEEEECH-HHH-TTCCTT--C--CC------
T ss_pred             cCCEEEEecCccCCCcCCcchhhHhcCC-CCCEEE--ECccccCCCCCeEEEEECH-HHH-hhhccc--c--cc------
Confidence            9999999999976422111111011122 568775  56999865 5688888764 322 222110  0  00      


Q ss_pred             cccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEecCCCeeEEEEEeec
Q 037144          341 KEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD----KRFEVAFPRNFSLVCFRVTP  416 (502)
Q Consensus       341 ~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~----~~~~l~~~~~~~~v~f~~~~  416 (502)
                               .++ .+.+..+....++++.+..   .++.++..++++++.+.|+++    |.+..+ ++..+++.+.+..
T Consensus       310 ---------~t~-~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~-~~~g~~~~i~~~~  375 (433)
T 1z7d_A          310 ---------STY-GGNPLAASICVEALNVLIN---EKLCENAEKLGGPFLENLKRELKDSKIVRDV-RGKGLLCAIEFKN  375 (433)
T ss_dssp             ---------CTT-TTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHTTCTTEEEE-EEETTEEEEEECT
T ss_pred             ---------ccC-CCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EeeeeEEEEEEcc
Confidence                     011 0111122233344444322   245677788888888888653    332222 2334566666543


Q ss_pred             CcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHH
Q 037144          417 SAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQ  496 (502)
Q Consensus       417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~  496 (502)
                      ..                           ....++.+.+.++|.++ .+.   +..++|+++. ...++++|+++++.|+
T Consensus       376 ~~---------------------------~~~~~~~~~l~~~Gv~v-~~~---~~~~iRi~~~-~~~t~e~i~~~l~~l~  423 (433)
T 1z7d_A          376 EL---------------------------VNVLDICLKLKENGLIT-RDV---HDKTIRLTPP-LCITKEQLDECTEIIV  423 (433)
T ss_dssp             TT---------------------------CCHHHHHHHHHHTTEEC-CEE---TTTEEEECCC-TTCCHHHHHHHHHHHH
T ss_pred             Ch---------------------------hHHHHHHHHHHHCCeEE-ecC---CCCEEEEECC-cCCCHHHHHHHHHHHH
Confidence            10                           00245677777778643 332   3468999874 4567889999999998


Q ss_pred             HHHHh
Q 037144          497 EHLEA  501 (502)
Q Consensus       497 ~~~~~  501 (502)
                      ++.++
T Consensus       424 ~~l~~  428 (433)
T 1z7d_A          424 KTVKF  428 (433)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            87653

>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*

Probab=99.79  E-value=1.1e-17  Score=170.41  Aligned_cols=220  Identities=12%  Similarity=0.119  Sum_probs=153.8

Q ss_pred             cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144          110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ  189 (502)
Q Consensus       110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~  189 (502)
                      ..|...++|+    .++++.|.+         ..+++++|++|+.. +.....           +++.|+++...|.+..
T Consensus        65 ~~p~~~~l~~----~la~l~g~~---------~~~~~~sG~~Ai~~-~~~l~~-----------~gd~Vi~~~~~y~~~~  119 (400)
T 3nmy_A           65 HNPTRFAYER----CVAALEGGT---------RAFAFASGMAATST-VMELLD-----------AGSHVVAMDDLYGGTF  119 (400)
T ss_dssp             CCHHHHHHHH----HHHHHHTCS---------EEEEESSHHHHHHH-HHTTSC-----------TTCEEEEESSCCHHHH
T ss_pred             CCHHHHHHHH----HHHHHhCCC---------CEEEecCHHHHHHH-HHHHcC-----------CCCEEEEeCCCchHHH
Confidence            3455555554    477777765         35778888888765 322111           5678888888888655


Q ss_pred             HHH-----HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCC
Q 037144          190 KAA-----QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGI  264 (502)
Q Consensus       190 ~aa-----~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~  264 (502)
                      ...     ...|+   +++.++.+       |+++|+++|+++      +.+|++..++|++|.+.|+++|+++|++||+
T Consensus       120 ~~~~~~~~~~~g~---~~~~v~~~-------d~~~l~~~i~~~------~~~v~~e~~~np~G~~~~l~~i~~la~~~g~  183 (400)
T 3nmy_A          120 RLFERVRRRTAGL---DFSFVDLT-------DPAAFKAAIRAD------TKMVWIETPTNPMLKLVDIAAIAVIARKHGL  183 (400)
T ss_dssp             HHHHHTHHHHHCC---EEEEECTT-------SHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHTTC
T ss_pred             HHHHHhhHhhcCe---EEEEECCC-------CHHHHHHHhccC------CCEEEEECCCCCCCeeecHHHHHHHHHHcCC
Confidence            543     33588   88888763       889999998654      3488889999999999999999999999999


Q ss_pred             EEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-c-ce-EEEeeCchhhhhhhcCCcccccCccCCCCCc
Q 037144          265 WVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-D-CC-CLWVKDPSCLLSTLSTNPQYLKNEATDQEPK  341 (502)
Q Consensus       265 ~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~-~g-~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~  341 (502)
                      ++++|++|+.+.+..+. . .     ++|.++.++||++++|. . .| +++++++.... .+.....+.          
T Consensus       184 ~livDe~~~~~~~~~~~-~-~-----g~div~~S~sK~l~g~g~~~gG~~vv~~~~~~~~-~l~~~~~~~----------  245 (400)
T 3nmy_A          184 LTVVDNTFASPMLQRPL-S-L-----GADLVVHSATKYLNGHSDMVGGIAVVGDNAELAE-QMAFLQNSI----------  245 (400)
T ss_dssp             EEEEECTTTHHHHCCGG-G-G-----TCSEEEEETTTTTTCSSSCCCEEEEECSCHHHHH-HHHHHHHHH----------
T ss_pred             EEEEECCCcccccCChh-h-c-----CCcEEEecCccccCCCCCcceeEEEEeCCHHHHH-HHHHHHHhc----------
Confidence            99999999865543321 1 1     79999999999998773 2 34 45555554322 221100011          


Q ss_pred             ccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q 037144          342 EQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAF  403 (502)
Q Consensus       342 ~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~  403 (502)
                                   +....++..|.+++.  .+.+..++++..++++++.+.|++.|.++-+.
T Consensus       246 -------------g~~~~~~~a~~~l~~--l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~V~  292 (400)
T 3nmy_A          246 -------------GGVQGPFDSFLALRG--LKTLPLRMRAHCENALALAQWLETHPAIEKVI  292 (400)
T ss_dssp             -------------CCBCCHHHHHHHHHH--HTTHHHHHHHHHHHHHHHHHHHTTCTTEEEEE
T ss_pred             -------------CCCCCHHHHHHHHHh--HhHHHHHHHHHHHHHHHHHHHHHcCCCEeEEE
Confidence                         111245666777764  45677888999999999999999999887653

>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*

Probab=99.78  E-value=7.1e-18  Score=172.34  Aligned_cols=233  Identities=12%  Similarity=0.066  Sum_probs=159.5

Q ss_pred             HHHHHHHhcCCCCccCcCCCCcEEE---cCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCC-CCchhHH-------
Q 037144          121 VMDWLGQMLDLPKSFLFSGNGGGVI---QGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSD-QTHCAFQ-------  189 (502)
Q Consensus       121 ~~~~l~~l~g~~~~~~~~~~~~g~~---t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~-~~H~s~~-------  189 (502)
                      +.+.+++++|.+.         .++   ++||++||..++.+...           +++.|+++. ..|....       
T Consensus        78 Le~~lA~l~g~e~---------alv~p~~~sGt~Ai~~al~all~-----------pGD~Vl~~~~~~y~~~~~~~g~~~  137 (427)
T 3i16_A           78 LDAVYARVFNTES---------ALVRPHFVNGTHALGAALFGNLR-----------PGNTMLSVCGEPYDTLHDVIGITE  137 (427)
T ss_dssp             HHHHHHHHHTCSE---------EEEETTCCSHHHHHHHHHHHHCC-----------TTCEEEESSSSCCGGGHHHHTCSC
T ss_pred             HHHHHHHHhCCcc---------eEEeCCCccHHHHHHHHHHHHhC-----------CCCEEEEeCCCccHHHHHHHhccc
Confidence            3356889999864         355   88999999777765533           677888887 7776555       


Q ss_pred             ----HHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEec----CCccccccCChhHHHHHHHH
Q 037144          190 ----KAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATV----GTTAITAVDPLKPLCDVAKQ  261 (502)
Q Consensus       190 ----~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~----gtt~~G~idpl~eI~~i~~~  261 (502)
                          +.++..|+   +++.+|+++  ++.+|+++|++++++.    ..+.+|+++.    +++++|.+.|+++|+++|++
T Consensus       138 ~~~~~~l~~~G~---~~~~v~~~~--~g~~D~e~l~~~l~~~----~~tklV~i~~s~~~p~nptg~i~dl~~i~~la~~  208 (427)
T 3i16_A          138 NSNMGSLKEFGI---NYKQVDLKE--DGKPNLEEIEKVLKED----ESITLVHIQRSTGYGWRRALLIEDIKSIVDCVKN  208 (427)
T ss_dssp             CCSSCCTGGGTC---EEEECCCCT--TSSCCHHHHHHHHHTC----TTEEEEEEECSCCSSSSCCCCHHHHHHHHHHHHH
T ss_pred             cchHHHHHHcCC---EEEEecCcc--CCCcCHHHHHHHhhCC----CCCEEEEEEcCCCCCCCCcccHHHHHHHHHHHHH
Confidence                34456688   899999875  4689999999999731    1134788887    89999999999999999999


Q ss_pred             --hCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC--cceEEEeeCchhhhhhhcC-CcccccCccC
Q 037144          262 --FGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL--DCCCLWVKDPSCLLSTLST-NPQYLKNEAT  336 (502)
Q Consensus       262 --~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~--~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~  336 (502)
                        +|+++|||++|+.+........      .++|.++.++||+++.+.  ..|+++.+ +......... ....+..   
T Consensus       209 ~~~g~~livD~a~~~~~~~~~p~~------~gaDiv~~S~sK~lgg~g~~~gG~i~~~-~~li~~l~~~~~~~~~g~---  278 (427)
T 3i16_A          209 IRKDIICFVDNCYGEFMDTKEPTD------VGADLIAGSLIKNIGGGIAPTGGYLAGT-KDCIEKTSYRLTVPGIGG---  278 (427)
T ss_dssp             HCTTSEEEEECTTTTTSSSSCGGG------GTCSEEEEETTSGGGTTTCCSCEEEEEC-HHHHHHHHHHHSCTTTGG---
T ss_pred             hCCCCEEEEECCCccccccCCccc------cCCeEEEecCcccCCCCCCceEEEEEEC-HHHHHHHHHhcccCccCc---
Confidence              9999999999987653222111      178999999999998632  23666554 4433222110 1111110   


Q ss_pred             CCCCcccccCCCcccccCCCCCCchH-HHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCee-----EE
Q 037144          337 DQEPKEQEVGYKDWQITLCRRFRSLK-LWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFS-----LV  410 (502)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~sr~~~al~-~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~-----~v  410 (502)
                                      ..+   .++. .|.+++.  ...+..++++..+++.++++.|+++ ++++. |....     ++
T Consensus       279 ----------------~~~---~~~~~a~~~l~g--l~~~~~r~~~~~~~a~~la~~L~~~-g~~V~-p~~~~~~~~~i~  335 (427)
T 3i16_A          279 ----------------ECG---STFGVVRSMYQG--LFLAPHISMEALKGAILCSRIMELA-GFEVM-PKYDEKRSDIIQ  335 (427)
T ss_dssp             ----------------GCC---CCTTCHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHT-TCEEE-SCTTSCCSSSCE
T ss_pred             ----------------cCC---ccHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhC-CCeec-CCCCCCCccEEE
Confidence                            001   1122 4555543  4556788999999999999999998 57774 43333     77


Q ss_pred             EEEee
Q 037144          411 CFRVT  415 (502)
Q Consensus       411 ~f~~~  415 (502)
                      +|.+.
T Consensus       336 ~i~l~  340 (427)
T 3i16_A          336 SIKFN  340 (427)
T ss_dssp             EEECS
T ss_pred             EEEEC
Confidence            77764

>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}

Probab=99.78  E-value=3.2e-17  Score=168.61  Aligned_cols=329  Identities=11%  Similarity=0.040  Sum_probs=175.6

Q ss_pred             HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHH-HHH
Q 037144          115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQK-AAQ  193 (502)
Q Consensus       115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~-aa~  193 (502)
                      .+...++.+|+++.++.+.+       ..++|+||++|+..++.+++.....+ |..  ++..|++.+.+++.... +..
T Consensus        71 ~~~~~~l~~~la~~~~~~~~-------~v~~~~gg~ea~~~al~~~~~~~~~~-g~~--~~~~vi~~~~~yhg~~~~~~~  140 (430)
T 3i4j_A           71 SDVLEEYAGRLARFVGLPTF-------RFWAVSGGSEATESAVKLARQYHVER-GEP--GRFKVITRVPSYHGASLGSLA  140 (430)
T ss_dssp             EHHHHHHHHHHHHHTTCTTC-------EEEEESSHHHHHHHHHHHHHHHHHHT-TCT--TCCEEEEETTC----------
T ss_pred             CHHHHHHHHHHHHhCCCCCC-------EEEEeCcHHHHHHHHHHHHHHHHHhc-CCC--CCcEEEEEeCCcCCCCccccc
Confidence            34566778899999987544       58999999999999999887653322 111  34455555555443333 222


Q ss_pred             HcCCCC---------C--CEEEEecCCC-CCcccCHHHHHHHHHHHHhcCCccEEEEEecCCc-cccccCC----hhHHH
Q 037144          194 IVGIDR---------K--NIRAIKTTKS-SSYGLSAESVLSQINLDVEAELIPLFLCATVGTT-AITAVDP----LKPLC  256 (502)
Q Consensus       194 ~~Glg~---------~--~v~~v~~~~~-~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt-~~G~idp----l~eI~  256 (502)
                      ..|...         .  .+..+|.+.. ..+..|+++|+++|++...  ..+.+|+++...+ ++|.+-+    +++|+
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~--~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~  218 (430)
T 3i4j_A          141 ASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLEREGP--ETVAAFMAEPVVGASDAALAPAPGYYERVR  218 (430)
T ss_dssp             ---------------CGGGSCEECCCCTTSCHHHHHTHHHHHHHHHCG--GGEEEEEECSSCCGGGTTCCCCTTHHHHHH
T ss_pred             ccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHHHHHhcCC--CCEEEEEEcCcccCcCCcccCCHHHHHHHH
Confidence            222100         0  2344554321 0134678999999975310  1245666666667 8888777    99999


Q ss_pred             HHHHHhCCEEEeecccccccccCccchhhhc-CCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCC-cccccC
Q 037144          257 DVAKQFGIWVHVDAAYAGSACICPEFRHFID-GVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTN-PQYLKN  333 (502)
Q Consensus       257 ~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~-~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~-~~yl~~  333 (502)
                      ++|++||+++|+|.+|.++............ ++ ..|.+++  .|.++.. ...|+++.+ +... +.+... ..+...
T Consensus       219 ~l~~~~~~~li~DEv~~~~~~~g~~~~~~~~~~~-~~di~t~--sK~l~~G~~r~G~~~~~-~~i~-~~~~~~~~~~~~~  293 (430)
T 3i4j_A          219 DICDEAGIIFIADEVMSGMGRCGSPLALSRWSGV-TPDIAVL--GKGLAAGYAPLAGLLAA-PQVY-ETVMGGSGAFMHG  293 (430)
T ss_dssp             HHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTTC-CCSEEEE--CGGGTTTSSCCEEEEEC-HHHH-HHHHHTTCBCCCC
T ss_pred             HHHHHcCCEEEEechhhCCCcccchhhhhhhcCC-CCcEEEE--cccccCCccccEEEEEC-HHHH-HHHhccCCccccc
Confidence            9999999999999999765332111110011 22 4567765  4998865 667888774 3332 222211 111111


Q ss_pred             ccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHh----cCCCeEEecCCCeeE
Q 037144          334 EATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVT----SDKRFEVAFPRNFSL  409 (502)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~----~~~~~~l~~~~~~~~  409 (502)
                      .                    +-...++.+.+++..+..-.-+++.++..++.+++++.|+    +.|++..+ ++..++
T Consensus       294 ~--------------------t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~g~~  352 (430)
T 3i4j_A          294 F--------------------TYAGHPVSVAAGLSVLDIVEREDLTGAAKERGAQLLAGLQALQARFPQMMQV-RGTGLL  352 (430)
T ss_dssp             C--------------------TTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE-EEETTE
T ss_pred             C--------------------CCCCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EEEEEE
Confidence            0                    0011233333333333110012344455555555555543    56666655 334456


Q ss_pred             EEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEee-eE--CCEEEEEEEecCCCCcHH
Q 037144          410 VCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHA-IV--GGIYVLRFAAGNSMTMES  486 (502)
Q Consensus       410 v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-~~--~g~~~lR~~~~~~~t~~~  486 (502)
                      +.+.+.....                   ...........++.+.+.++|.++.+.. ..  .+..++|+++. ...+++
T Consensus       353 ~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~~~~iRi~~~-~~~t~e  412 (430)
T 3i4j_A          353 LGVVLGDLAT-------------------GQAFETPGIASRIGAAALKRGLITYPGSGAEPNGRGDHLLLGPP-LSITAA  412 (430)
T ss_dssp             EEEEEC-------------------------------CHHHHHHHHHHTTEECC-----------CEEEECCC-TTCCHH
T ss_pred             EEEEeccccc-------------------cCCCccHHHHHHHHHHHHhCCCEEEecccccCCCCCCEEEEECC-CCCCHH
Confidence            6665542100                   0000000113567778888887543331 11  13568999975 446777


Q ss_pred             HHHHHHHHHHHHHHh
Q 037144          487 HVRAAWTVVQEHLEA  501 (502)
Q Consensus       487 di~~~~~~l~~~~~~  501 (502)
                      ++++++++|+++.++
T Consensus       413 ~i~~~l~~l~~~l~~  427 (430)
T 3i4j_A          413 EVDGLLALLAGALED  427 (430)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999988764

>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*

Probab=99.78  E-value=7.8e-18  Score=171.40  Aligned_cols=233  Identities=8%  Similarity=-0.025  Sum_probs=159.0

Q ss_pred             HHHHHHHHhcCCCCccCcCCCCcEEE---cCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCC-CCchhHHHH----
Q 037144          120 IVMDWLGQMLDLPKSFLFSGNGGGVI---QGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSD-QTHCAFQKA----  191 (502)
Q Consensus       120 ~~~~~l~~l~g~~~~~~~~~~~~g~~---t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~-~~H~s~~~a----  191 (502)
                      ++.+.+++++|.+.         .++   ++||++||..++.+...           +++.|+++. ..|......    
T Consensus        63 ~Le~~lA~l~g~e~---------alv~p~~~sGt~Ai~~al~all~-----------~GD~Vl~~~~~~y~~~~~~~~~~  122 (409)
T 3jzl_A           63 TLERVYATVFKTEA---------ALVRPQIISGTHAISTVLFGILR-----------PDDELLYITGQPYDTLEEIVGIR  122 (409)
T ss_dssp             HHHHHHHHHHTCSE---------EEEETTSCSHHHHHHHHHHHHCC-----------TTCEEEECSSSCCTTHHHHHTSS
T ss_pred             HHHHHHHHHhCCCc---------EEEECCCccHHHHHHHHHHHhcC-----------CCCEEEEeCCCCcHhHHHHHhcc
Confidence            34456788888764         355   88999999877766533           677888887 777776643    


Q ss_pred             ------HHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEec----CCccccccCChhHHHHHHHH
Q 037144          192 ------AQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATV----GTTAITAVDPLKPLCDVAKQ  261 (502)
Q Consensus       192 ------a~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~----gtt~~G~idpl~eI~~i~~~  261 (502)
                            ++..|+   +++.+|+++  +|.+|+++|+++|+++      +.+|+++.    +++++|.+.|+++|+++|++
T Consensus       123 g~~~~~l~~~G~---~~~~v~~~~--~g~~d~e~l~~ai~~~------tklV~i~~s~g~p~nptg~v~~l~~I~~la~~  191 (409)
T 3jzl_A          123 KQGQGSLKDFHI---GYSSVPLLE--NGDVDFPRIAKKMTPK------TKMIGIQRSRGYADRPSFTIEKIKEMIVFVKN  191 (409)
T ss_dssp             SSSSSCTGGGTC---EEEECCCCT--TSCCCHHHHHHHCCTT------EEEEEEECSCTTSSSCCCCHHHHHHHHHHHHH
T ss_pred             cchhhHHHHcCC---EEEEeCCCC--CCCcCHHHHHHhccCC------CeEEEEECCCCCCCCCcCccccHHHHHHHHHh
Confidence                  355688   899999875  4789999999998654      34788888    99999999999999999999


Q ss_pred             --hCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-c-ceEEEeeCchhhhhhhcC-CcccccCccC
Q 037144          262 --FGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-D-CCCLWVKDPSCLLSTLST-NPQYLKNEAT  336 (502)
Q Consensus       262 --~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~-~g~~~~r~~~~l~~~~~~-~~~yl~~~~~  336 (502)
                        +|+++|||++|+.+....... .     .++|.++.++||+++++. . .|+++. +++........ ...++...  
T Consensus       192 ~~~~~~livD~a~~~~~~~~~p~-~-----~g~Div~~S~sK~lgg~~~~~GG~v~~-~~~li~~l~~~~~~~~~g~~--  262 (409)
T 3jzl_A          192 INPEVIVFVDNCYGEFVEYQEPP-E-----VGADIIAGSLIKNPGGGLAKTGGYIAG-KEALVDLCGYRLTTPGIGRE--  262 (409)
T ss_dssp             HCTTCEEEEECTTCTTTSSCCSG-G-----GTCSEEEEETTSGGGTTTCSSCEEEEE-CHHHHHHHHHHHSCTTTGGG--
T ss_pred             hCCCCEEEEeCCcccccccCCcc-c-----cCCeEEEECccccCCccCCceEEEEEe-CHHHHHHHHHHhcccccccc--
Confidence              999999999998765322111 1     178999999999998653 2 355554 45443322110 11111110  


Q ss_pred             CCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCee-----EEE
Q 037144          337 DQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFS-----LVC  411 (502)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~-----~v~  411 (502)
                                       .+-...  ..|++++  |......++++..+++.++++.|+++ ++++. +....     +++
T Consensus       263 -----------------~g~~~~--~~~~~l~--gl~~~~~r~~~~~~~a~~la~~L~~~-g~~v~-p~~~~~~~~~i~~  319 (409)
T 3jzl_A          263 -----------------AGASLY--SLLEMYQ--GFFLAPHVTAQAIKGARFTAAMLAEF-GVEAD-PVWDAPRTDLIQS  319 (409)
T ss_dssp             -----------------CCCCTT--CHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEE-SCTTSCCSSSCCE
T ss_pred             -----------------ccccHH--HHHHHHH--HHhhHHHHHHHHHHHHHHHHHHHHhC-CCccc-CCCCCCCccEEEE
Confidence                             000001  1234443  33556778889999999999999998 67874 32323     666


Q ss_pred             EEee
Q 037144          412 FRVT  415 (502)
Q Consensus       412 f~~~  415 (502)
                      |.+.
T Consensus       320 i~l~  323 (409)
T 3jzl_A          320 VSFH  323 (409)
T ss_dssp             EECS
T ss_pred             EEeC
Confidence            7664

>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}

Probab=99.77  E-value=1.9e-16  Score=163.73  Aligned_cols=347  Identities=13%  Similarity=0.067  Sum_probs=192.0

Q ss_pred             HHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCc
Q 037144           91 GIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGR  170 (502)
Q Consensus        91 ~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~  170 (502)
                      ..+.+.+...+...... .......+...++.+.++++++.+.+       ..++|+||++|+..++.+++.... ..|.
T Consensus        69 ~~v~~a~~~~~~~~~~~-~~~~~~~~~~~~l~~~la~~~~~~~~-------~v~~~~ggsea~~~al~~~~~~~~-~~g~  139 (449)
T 3a8u_X           69 KEIQEAVAKQLSTLDYS-PGFQYGHPLSFQLAEKITDLTPGNLN-------HVFFTDSGSECALTAVKMVRAYWR-LKGQ  139 (449)
T ss_dssp             HHHHHHHHHHTTTCSCC-CSSSCCCHHHHHHHHHHHTTSSTTEE-------EEEEESSHHHHHHHHHHHHHHHHH-HTTC
T ss_pred             HHHHHHHHHHHHhCCCc-cccccCCHHHHHHHHHHHHhCCCCCC-------EEEEcCcHHHHHHHHHHHHHHHHH-hcCC
Confidence            34555555555432210 00012233455677788888875443       589999999999999988875321 1111


Q ss_pred             cCCCCeEEE-eCCCCchhHHHHHHHcCC-------C--CCCEEEEecCCC--CC-cccC--------HHHHHHHHHHHHh
Q 037144          171 ENISKLVVY-SSDQTHCAFQKAAQIVGI-------D--RKNIRAIKTTKS--SS-YGLS--------AESVLSQINLDVE  229 (502)
Q Consensus       171 ~~~~~~~v~-~s~~~H~s~~~aa~~~Gl-------g--~~~v~~v~~~~~--~~-~~~d--------~~~Le~~i~~~~~  229 (502)
                      .  +++.|+ .+...|.+...++...|.       +  ...++.++++..  .+ ..+|        +++|+++|++.. 
T Consensus       140 ~--~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~le~~l~~~~-  216 (449)
T 3a8u_X          140 A--TKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALADELLKLIELHD-  216 (449)
T ss_dssp             T--TCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHHHHHHHHHHC-
T ss_pred             C--CCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCccccCccccCChHHHHHHHHHHHHHHHHhcC-
Confidence            0  234444 455566665556565542       1  114566665421  00 0256        999999997531 


Q ss_pred             cCCccEEEEEecCCccccccCC----hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCC
Q 037144          230 AELIPLFLCATVGTTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFT  305 (502)
Q Consensus       230 ~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~  305 (502)
                       ...+.+|+++...+++|.+-|    +++|.++|++||+++++|++|.++......+.....++ ..|.+++  +|+++.
T Consensus       217 -~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~-~~di~s~--sK~l~~  292 (449)
T 3a8u_X          217 -ASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSMFGADSFGV-TPDLMCI--AKQVTN  292 (449)
T ss_dssp             -GGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTC-CCSEEEE--CGGGGT
T ss_pred             -CCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCcchhhhhcCC-CCCEEEE--cccccC
Confidence             012346666665567998888    99999999999999999999965432211111011122 4676654  599875


Q ss_pred             C-CcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHH---HHHHHHhcHHHHHHHHHH
Q 037144          306 T-LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKL---WVVIRNFGVANLRNFIRS  381 (502)
Q Consensus       306 p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~---~~~l~~~g~~g~~~~~~~  381 (502)
                      . ...|++++++ ... +.+......   ..      ...  +   ....+-....+.+   .++++.+..   .++.++
T Consensus       293 G~~~~G~~~~~~-~~~-~~l~~~~~~---~~------~~~--~---~~~~t~~~~~~~~aa~~aal~~~~~---~~~~~~  353 (449)
T 3a8u_X          293 GAIPMGAVIAST-EIY-QTFMNQPTP---EY------AVE--F---PHGYTYSAHPVACAAGLAALCLLQK---ENLVQS  353 (449)
T ss_dssp             TSSCCEEEEEEH-HHH-HHHHTCSSC---TT------SCS--S---CCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHH
T ss_pred             CCCceEEEEECH-HHH-HHhhccCcc---cc------ccc--c---cccCCCcccHHHHHHHHHHHHHHHh---cCHHHH
Confidence            3 4588888764 332 233221000   00      000  0   0000001122333   333443322   246778


Q ss_pred             HHHHHHHHHHHHhcCCCeEEec--CCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcC
Q 037144          382 HVGMAKLFERLVTSDKRFEVAF--PRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSG  459 (502)
Q Consensus       382 ~~~la~~l~~~l~~~~~~~l~~--~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g  459 (502)
                      ..++.+++++.|++++++.++.  ++..+++.+.+.....                    . .  ......+.+.+.++|
T Consensus       354 ~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~--------------------~-~--~~~~~~~~~~l~~~G  410 (449)
T 3a8u_X          354 VAEVAPHFEKALHGIKGAKNVIDIRNFGLAGAIQIAPRDG--------------------D-A--IVRPFEAGMALWKAG  410 (449)
T ss_dssp             HHHHHHHHHHHHHTTTTSTTEEEEEEETTEEEEEECCBTT--------------------B-S--SHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHhcCCCeEEEeeeEEEEEEEEecCcc--------------------c-c--cccHHHHHHHHHHCC
Confidence            8888999999998753332211  2334566666643210                    0 0  000124666777778


Q ss_pred             cEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          460 KVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       460 ~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      .++...    + .++|+++. ...+++++++++++|+++.++
T Consensus       411 v~v~~~----g-~~iRis~~-~~~t~~~i~~~l~~l~~~l~~  446 (449)
T 3a8u_X          411 FYVRFG----G-DTLQFGPT-FNSKPQDLDRLFDAVGEVLNK  446 (449)
T ss_dssp             EECEEE----T-TEEEECCC-TTCCHHHHHHHHHHHHHHHHH
T ss_pred             cEEecC----C-CEEEEECC-CcCCHHHHHHHHHHHHHHHHH
Confidence            654332    3 68999964 456788999999999988764

>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*

Probab=99.77  E-value=8.9e-17  Score=165.82  Aligned_cols=303  Identities=10%  Similarity=-0.007  Sum_probs=179.5

Q ss_pred             HHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCC-CeEEEeCCCCchhHHHHHHHcC
Q 037144          118 ENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENIS-KLVVYSSDQTHCAFQKAAQIVG  196 (502)
Q Consensus       118 e~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~-~~~v~~s~~~H~s~~~aa~~~G  196 (502)
                      ..++.+++++++|.+         .+++++||++|+..++.+++.......|.. .+ +.+|+.....|.+...++...|
T Consensus       120 ~~~l~~~la~~~g~~---------~v~~~~sGseA~~~al~~~~~~~~~~~g~~-~g~~~vi~~~~~yhg~~~~~~~~~g  189 (439)
T 2oat_A          120 LGEYEEYITKLFNYH---------KVLPMNTGVEAGETACKLARKWGYTVKGIQ-KYKAKIVFAAGNFWGRTLSAISSST  189 (439)
T ss_dssp             HHHHHHHHHHHHTCS---------EEEEESSHHHHHHHHHHHHHHHHHHTTCCC-TTCCEEEEETTCCCCSSHHHHTTCC
T ss_pred             HHHHHHHHHHhcCCC---------EEEEeCCHHHHHHHHHHHHHHHhhhccCCC-CCCCeEEEEcCCCCCCCHhHhhcCC
Confidence            334555666666632         489999999999999998875322111100 02 3444445555666666655544


Q ss_pred             C-------C--CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC----ChhHHHHHHHHhC
Q 037144          197 I-------D--RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD----PLKPLCDVAKQFG  263 (502)
Q Consensus       197 l-------g--~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id----pl~eI~~i~~~~g  263 (502)
                      .       +  ...++.+|.+       |+++|+++|+..     .+.+|+++...+++|.+.    ++++|.++|++||
T Consensus       190 ~~~~~~~~~p~~~~v~~~~~~-------d~~~le~~l~~~-----~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g  257 (439)
T 2oat_A          190 DPTSYDGFGPFMPGFDIIPYN-------DLPALERALQDP-----NVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQ  257 (439)
T ss_dssp             CHHHHTTSCSCCTTEEEECSS-------CHHHHHHHTTST-----TEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTT
T ss_pred             ChhcccCCCCCCCCeEEeCCC-------CHHHHHHHhCCC-----CEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcC
Confidence            1       1  0256677642       899999998511     244666666556688765    7999999999999


Q ss_pred             CEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCcccccCccCCCCCcc
Q 037144          264 IWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKE  342 (502)
Q Consensus       264 ~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~  342 (502)
                      +++++|++|.++......+.....++ ..|.+  +++|+++.+ ...|++++++. .. +.+..   .. ..        
T Consensus       258 illI~DEv~~g~g~~g~~~~~~~~~~-~~Di~--t~sK~l~~G~~~~G~v~~~~~-~~-~~l~~---~~-~~--------  320 (439)
T 2oat_A          258 VLFIADEIQTGLARTGRWLAVDYENV-RPDIV--LLGKALSGGLYPVSAVLCDDD-IM-LTIKP---GE-HG--------  320 (439)
T ss_dssp             CEEEEECTTTTTTTTSSSSGGGGGTC-CCSEE--EECGGGGTTSSCCEEEEECHH-HH-TTSCT---TS-SC--------
T ss_pred             CEEEEeccccCCccCCcchhHHHhCC-CCcEE--EecccccCCCCCeEEEEECHH-HH-hccCC---CC-cc--------
Confidence            99999999965422111111011122 46876  456999865 56888887643 22 22211   00 00        


Q ss_pred             cccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe--cCCCeeEEEEEeecCcch
Q 037144          343 QEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA--FPRNFSLVCFRVTPSAVM  420 (502)
Q Consensus       343 ~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~--~~~~~~~v~f~~~~~~~~  420 (502)
                             .++ .+.+..+....++++.+..   .++.++..++++++++.|+++ ++.++  .++..+++.+.+....  
T Consensus       321 -------~t~-~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~g~~~~v~l~~~~--  386 (439)
T 2oat_A          321 -------STY-GGNPLGCRVAIAALEVLEE---ENLAENADKLGIILRNELMKL-PSDVVTAVRGKGLLNAIVIKETK--  386 (439)
T ss_dssp             -------CSS-TTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHTTS-CTTTEEEEEEETTEEEEEECCCS--
T ss_pred             -------cCC-CcCHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHh-cCCCcEEEEeeeeEEEEEEecCc--
Confidence                   011 0111122233344544432   256778888999999999886 33221  1223345666554310  


Q ss_pred             hhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144          421 DKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~  500 (502)
                                         .     ....++.+++.++|.++ .+   .+..++|+++. ...++++++++++.|+++.+
T Consensus       387 -------------------~-----~~~~~l~~~l~~~Gv~v-~~---~~~~~iRi~~~-~~~t~e~i~~~l~~l~~~l~  437 (439)
T 2oat_A          387 -------------------D-----WDAWKVCLRLRDNGLLA-KP---THGDIIRFAPP-LVIKEDELRESIEIINKTIL  437 (439)
T ss_dssp             -------------------S-----CCHHHHHHHHHHTTEEC-CB---SSSSEEEECCC-TTCCHHHHHHHHHHHHHHHH
T ss_pred             -------------------c-----HHHHHHHHHHHHCCeEE-ec---CCCCEEEEECc-cCCCHHHHHHHHHHHHHHHH
Confidence                               0     00235677777778643 33   23568999874 45678899999999999876


Q ss_pred             hC
Q 037144          501 AF  502 (502)
Q Consensus       501 ~~  502 (502)
                      ++
T Consensus       438 ~~  439 (439)
T 2oat_A          438 SF  439 (439)
T ss_dssp             TC
T ss_pred             hC
Confidence            53

>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*

Probab=99.77  E-value=3.4e-17  Score=168.58  Aligned_cols=320  Identities=13%  Similarity=0.021  Sum_probs=181.5

Q ss_pred             HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCe-EEEeCCCCchhHHHHHHH
Q 037144          116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKL-VVYSSDQTHCAFQKAAQI  194 (502)
Q Consensus       116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~-~v~~s~~~H~s~~~aa~~  194 (502)
                      ....++.+.+++++|.+.+       ..++|+||++|+..++.+++...         ++. +|+.+...|.+...+...
T Consensus        85 ~~~~~l~~~la~~~~~~~~-------~v~~~~gg~ea~~~a~~~~~~~~---------~~~~vi~~~~~yhg~~~~~~~~  148 (433)
T 1zod_A           85 RPVVDLATRLANITPPGLD-------RALLLSTGAESNEAAIRMAKLVT---------GKYEIVGFAQSWHGMTGAAASA  148 (433)
T ss_dssp             HHHHHHHHHHHHHSCTTCC-------EEEEESCHHHHHHHHHHHHHHHH---------TCCEEEEETTCCCCSSHHHHHT
T ss_pred             HHHHHHHHHHHHhCCCCcC-------EEEEeCchHHHHHHHHHHHHHhh---------CCCeEEEECCCcCCCChhHHhh
Confidence            3455667778888887543       58999999999999998776421         333 444444456555444433


Q ss_pred             cCC--------CCCCEEEEecCCC--C--------CcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----h
Q 037144          195 VGI--------DRKNIRAIKTTKS--S--------SYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----L  252 (502)
Q Consensus       195 ~Gl--------g~~~v~~v~~~~~--~--------~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l  252 (502)
                      .+.        -...++.++++..  .        .+.+|+++|+++|++.  ....+.+|+++...+++|.+-|    +
T Consensus       149 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~--~~~~~~~vi~~p~~~~~G~~~~~~~~l  226 (433)
T 1zod_A          149 TYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQ--SSGNLAAFIAEPILSSGGIIELPDGYM  226 (433)
T ss_dssp             CCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHH--CCSCEEEEEECSEETTTTCEECCTTHH
T ss_pred             cCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHHHHHHhc--CCCCeEEEEEccccCCCCcccCCHHHH
Confidence            221        0124666665320  0        1235799999999753  1123446666555567897655    9


Q ss_pred             hHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCccccc
Q 037144          253 KPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLK  332 (502)
Q Consensus       253 ~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~  332 (502)
                      ++|+++|++||+++++|++|+++............++ ..|.++  +.|+++.+.+.|+++.++ ... +.+... .+..
T Consensus       227 ~~l~~l~~~~~~~li~DEv~~~~g~~g~~~~~~~~~~-~~di~s--~sK~~~~G~~ig~~~~~~-~~~-~~~~~~-~~~~  300 (433)
T 1zod_A          227 AALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDGV-TPDILT--LSKTLGAGLPLAAIVTSA-AIE-ERAHEL-GYLF  300 (433)
T ss_dssp             HHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTC-CCSEEE--ECHHHHTTSSCEEEEECH-HHH-HHHHHT-TCCC
T ss_pred             HHHHHHHHHhCCEEEEeccccCCCcCchHhHHhhcCC-CCCEEE--ecccccCCCCeeEEEEhH-HHH-HhhccC-CCCC
Confidence            9999999999999999999986532211111011122 356665  459998777889988864 332 222211 1110


Q ss_pred             CccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEecCCCee
Q 037144          333 NEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTS----DKRFEVAFPRNFS  408 (502)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~----~~~~~l~~~~~~~  408 (502)
                      ..                +. .+......++.++++.+..+   ++.++..++++++++.|++    .|.+..+ ++..+
T Consensus       301 ~~----------------t~-~~~~~~~~a~~aal~~~~~~---~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~-~~~g~  359 (433)
T 1zod_A          301 YT----------------TH-VSDPLPAAVGLRVLDVVQRD---GLVARANVMGDRLRRGLLDLMERFDCIGDV-RGRGL  359 (433)
T ss_dssp             CC----------------TT-TTCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHHHCTTEEEE-EEETT
T ss_pred             CC----------------CC-CcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EEEEE
Confidence            00                00 00011112223344433222   3566677778888887765    3544433 33445


Q ss_pred             EEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHH
Q 037144          409 LVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHV  488 (502)
Q Consensus       409 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di  488 (502)
                      ++.+.+.......               .. +    .....++.+.+.++|.++.+...+.+..++|++++ ...+++++
T Consensus       360 ~~~i~~~~~~~~~---------------~~-~----~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~lRi~~~-~~~t~~~i  418 (433)
T 1zod_A          360 LLGVEIVKDRRTK---------------EP-A----DGLGAKITRECMNLGLSMNIVQLPGMGGVFRIAPP-LTVSEDEI  418 (433)
T ss_dssp             EEEEEEEEETTTT---------------EE-C----TTHHHHHHHHHHHTTEECCEECCTTSCCEEEECCC-TTCCHHHH
T ss_pred             EEEEEEecCcccc---------------CC-C----hHHHHHHHHHHHHCCCeEeccCCCCCCCEEEEECC-cCCCHHHH
Confidence            6666554210000               00 0    01134567777777865433332222468999864 45678899


Q ss_pred             HHHHHHHHHHHHh
Q 037144          489 RAAWTVVQEHLEA  501 (502)
Q Consensus       489 ~~~~~~l~~~~~~  501 (502)
                      +++++.|+++.++
T Consensus       419 ~~~l~~l~~~l~~  431 (433)
T 1zod_A          419 DLGLSLLGQAIER  431 (433)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999987764

>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}

Probab=99.76  E-value=2.9e-16  Score=162.60  Aligned_cols=330  Identities=12%  Similarity=0.034  Sum_probs=182.4

Q ss_pred             hHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHH
Q 037144          114 AVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQ  193 (502)
Q Consensus       114 ~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~  193 (502)
                      ..+...++.++++++++.+.        ..+||+|||+|+..|+.+++...... +.. .++.+|+.....|.....+..
T Consensus        89 ~~~~~~~la~~l~~~~~~~~--------~v~~~~ggseA~~~al~~~~~~~~~~-g~~-~~~~vi~~~~~yhg~~~~~~~  158 (452)
T 3n5m_A           89 SHEPAIKLAEKLNEWLGGEY--------VIFFSNSGSEANETAFKIARQYYAQK-GEP-HRYKFMSRYRGYHGNTMATMA  158 (452)
T ss_dssp             EEHHHHHHHHHHHHHHTSCE--------EEEEESSHHHHHHHHHHHHHHHHHTT-TCT-TCCEEEEETTCCCCSSHHHHH
T ss_pred             CCHHHHHHHHHHHHhCCCCc--------eEEEeCchHHHHHHHHHHHHHHHHhc-CCC-CCCEEEEECCCcCCCCHHHHh
Confidence            34566778889999987643        37999999999999999988542211 110 023344444444544333333


Q ss_pred             HcCCC---------CCCEEEEecCCCCC----------cccCHHHHHHHHHHHHhcCCccEEEEEecC-CccccccCC--
Q 037144          194 IVGID---------RKNIRAIKTTKSSS----------YGLSAESVLSQINLDVEAELIPLFLCATVG-TTAITAVDP--  251 (502)
Q Consensus       194 ~~Glg---------~~~v~~v~~~~~~~----------~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~g-tt~~G~idp--  251 (502)
                      ..|..         ...+..++....-.          +..++++||++|++.  ....+.+|+++.. .+ +|.+-|  
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~~~~vi~ep~~~n-~G~~~~~~  235 (452)
T 3n5m_A          159 ATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVECVKEVDRVMTWE--LSETIAAFIMEPIITG-GGILMAPQ  235 (452)
T ss_dssp             SCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHHHHHHHHHHHHH--CGGGEEEEEECSSBTT-TTCBCCCT
T ss_pred             cCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHHHHHHHHHHHHHhc--CCCCEEEEEEccccCC-CCeeeCCH
Confidence            32321         11355555421100          111289999999732  1122456777776 68 998876  


Q ss_pred             --hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcC--
Q 037144          252 --LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLST--  326 (502)
Q Consensus       252 --l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~--  326 (502)
                        +++|+++|++||++|++|.+|.++......+.....++ ..|.+++  .|.++.+ .+.|+++.++. . .+.+..  
T Consensus       236 ~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~~~~~~~~-~~di~t~--sK~l~~G~~~ig~~~~~~~-i-~~~~~~~~  310 (452)
T 3n5m_A          236 DYMKAVHETCQKHGALLISDEVICGFGRTGKAFGFMNYDV-KPDIITM--AKGITSAYLPLSATAVKRE-I-YEAFKGKG  310 (452)
T ss_dssp             THHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTC-CCSEEEE--CGGGGTTSSCCEEEEEEHH-H-HGGGCSSS
T ss_pred             HHHHHHHHHHHHcCCEEEEecchhCCCcccccchhhhcCC-CCCEEee--cccccCCCcceEEEEECHH-H-HHHHhhcc
Confidence              99999999999999999999976532221111111122 4677765  4988766 67888877543 2 233322  


Q ss_pred             -CcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHh----cCCCeEE
Q 037144          327 -NPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVT----SDKRFEV  401 (502)
Q Consensus       327 -~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~----~~~~~~l  401 (502)
                       ...++..                    .+-...++.+.+++..+..-.-++++++..++.+++++.|+    +.|.+..
T Consensus       311 ~~~~~~~~--------------------~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~  370 (452)
T 3n5m_A          311 EYEFFRHI--------------------NTFGGNPAACALALKNLEIIENENLIERSAQMGSLLLEQLKEEIGEHPLVGD  370 (452)
T ss_dssp             TTCSCCCC--------------------CSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTCTTEEE
T ss_pred             CCCCcccc--------------------CCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Confidence             1111110                    00011334444444333211113345555666666666654    4455544


Q ss_pred             ecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeee--ECCEEEEEEEec
Q 037144          402 AFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAI--VGGIYVLRFAAG  479 (502)
Q Consensus       402 ~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~--~~g~~~lR~~~~  479 (502)
                      + ++...++.+.+......                  .... ......++.+.+.++|.++.+...  ..+..++|+++.
T Consensus       371 ~-~~~g~~~~i~~~~~~~~------------------~~~~-~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~~~~iRi~~~  430 (452)
T 3n5m_A          371 I-RGKGLLVGIELVNDKET------------------KEPI-DNDKIASVVNACKEKGLIIGRNGMTTAGYNNILTLAPP  430 (452)
T ss_dssp             E-EESSSCEEEEEEEETTT------------------TEEC-CHHHHHHHHHHHHHTTEECEECTTSSTTCCCEEEECCC
T ss_pred             E-EEEEEEEEEEEecCCcc------------------cCCC-CHHHHHHHHHHHHHCCcEEeecCcccCCCCCEEEEECC
Confidence            4 23334455544321100                  0000 012234677778888975443321  112578999864


Q ss_pred             CCCCcHHHHHHHHHHHHHHHHhC
Q 037144          480 NSMTMESHVRAAWTVVQEHLEAF  502 (502)
Q Consensus       480 ~~~t~~~di~~~~~~l~~~~~~~  502 (502)
                       ...++++|++++++|+++.+++
T Consensus       431 -~~~t~e~i~~~l~~l~~~l~~~  452 (452)
T 3n5m_A          431 -LVISSEEIAFVIGTLKTAMERI  452 (452)
T ss_dssp             -TTCCHHHHHHHHHHHHHHHTTC
T ss_pred             -CCCCHHHHHHHHHHHHHHHHhC
Confidence             4467789999999999987653

>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}

Probab=99.75  E-value=3.9e-17  Score=166.85  Aligned_cols=234  Identities=9%  Similarity=0.027  Sum_probs=157.2

Q ss_pred             HHHHHHHHhcCCCCccCcCCCCcEEE---cCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCC-CCchhHH------
Q 037144          120 IVMDWLGQMLDLPKSFLFSGNGGGVI---QGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSD-QTHCAFQ------  189 (502)
Q Consensus       120 ~~~~~l~~l~g~~~~~~~~~~~~g~~---t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~-~~H~s~~------  189 (502)
                      ++.+.+++++|.+.         .++   ++||++||..++.+...           +++.|+++. ..|....      
T Consensus        78 ~Le~~lA~l~g~e~---------alv~p~~~sGt~A~~~al~all~-----------pGD~Vl~~~~~~y~~~~~~~g~~  137 (427)
T 3hvy_A           78 SLDRVYANIFNTES---------AFVRPHFVNGTHAIGAALFGNLR-----------PNDTMMSICGMPYDTLHDIIGMD  137 (427)
T ss_dssp             HHHHHHHHHHTCSE---------EEEETTCCSHHHHHHHHHHHTCC-----------TTCEEEECSSSCCGGGHHHHTCC
T ss_pred             HHHHHHHHHhCCCc---------eEEeCCCCcHHHHHHHHHHHhcC-----------CCCEEEEeCCCCchhHHHHhccc
Confidence            34466888998764         356   78999999777765433           678888887 6665544      


Q ss_pred             -----HHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEec----CCccccccCChhHHHHHHH
Q 037144          190 -----KAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATV----GTTAITAVDPLKPLCDVAK  260 (502)
Q Consensus       190 -----~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~----gtt~~G~idpl~eI~~i~~  260 (502)
                           ..++..|+   +++.+|. +  ++.+|+++|++++++.    .++.+|+++.    +++++|.+.|+++|+++|+
T Consensus       138 ~~~~~~~l~~~G~---~~~~v~~-~--~~~~d~e~l~~~i~~~----~~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~  207 (427)
T 3hvy_A          138 DSKKVGSLREYGV---KYKMVDL-K--DGKVDINTVKEELKKD----DSIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIR  207 (427)
T ss_dssp             TTCCSCCTGGGTC---EEEECCC-B--TTBCCHHHHHHHHHHC----TTEEEEEEESSCCSSSSCCCCHHHHHHHHHHHH
T ss_pred             cchhhhHHHHcCC---EEEEecC-C--CCCcCHHHHHHHhhCC----CCCEEEEEECCCCCCCCccccHHHHHHHHHHHH
Confidence                 33455788   8888887 3  4689999999999741    1245788888    8999999999999999999


Q ss_pred             H--hCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC--cceEEEeeCchhhhhhhcC-CcccccCcc
Q 037144          261 Q--FGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL--DCCCLWVKDPSCLLSTLST-NPQYLKNEA  335 (502)
Q Consensus       261 ~--~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~--~~g~~~~r~~~~l~~~~~~-~~~yl~~~~  335 (502)
                      +  +|++++||+||+.+........      .++|+++.++||+++++.  ..|+++. ++......... ....+.   
T Consensus       208 ~~~~g~~livD~a~~~~~~~~~p~~------~gaDiv~~S~sK~lgg~g~~~GG~i~~-~~~li~~l~~~~~~~~~g---  277 (427)
T 3hvy_A          208 EVNENVIVFVDNCYGEFVEEKEPTD------VGADIIAGSLIKNIGGGIATTGGYIAG-KEEYVTQATFRVTVPGIG---  277 (427)
T ss_dssp             HHCSSSEEEEECTTCTTTSSSCGGG------GTCSEEEEETTSGGGTTTCCSCEEEEE-CHHHHHHHHHHHSCTTTG---
T ss_pred             HhCCCCEEEEECCccccccCCCCcc------cCCeEEEECCcccccccccceEEEEEE-CHHHHHHHHHHhhcCCcc---
Confidence            9  8999999999987653222111      168999999999998632  2366555 44433222110 111110   


Q ss_pred             CCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCee-----EE
Q 037144          336 TDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFS-----LV  410 (502)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~-----~v  410 (502)
                                      ...+-.+.  ..|.+++  |..-...++++..+++.++++.|+++ ++++. |....     ++
T Consensus       278 ----------------~~~~~~~~--~a~~~~~--gl~~~~~r~~~~~~~a~~la~~L~~~-g~~V~-p~~~~~~~~li~  335 (427)
T 3hvy_A          278 ----------------GECGSTFG--VMRSLYE--GLFMAPHVTIEAVKGAVFCARIMELA-GFDVL-PKYNDKRTDIIQ  335 (427)
T ss_dssp             ----------------GGCCCCTT--CHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEE-SCTTSCCSSSEE
T ss_pred             ----------------cccCCCHH--HHHHHHH--hHhHHHHHHHHHHHHHHHHHHHHHhC-CCeec-CCCCCCCceEEE
Confidence                            00110011  1344444  33455678889999999999999998 57774 33333     67


Q ss_pred             EEEee
Q 037144          411 CFRVT  415 (502)
Q Consensus       411 ~f~~~  415 (502)
                      +|.+.
T Consensus       336 ~~~l~  340 (427)
T 3hvy_A          336 AIKFN  340 (427)
T ss_dssp             EEECS
T ss_pred             EEeCC
Confidence            77664

>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*

Probab=99.75  E-value=1.4e-16  Score=165.13  Aligned_cols=313  Identities=9%  Similarity=-0.062  Sum_probs=183.5

Q ss_pred             HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEE-eCCCCchhHHHHHHH
Q 037144          116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVY-SSDQTHCAFQKAAQI  194 (502)
Q Consensus       116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~-~s~~~H~s~~~aa~~  194 (502)
                      +...++.++++++++.+.+       .++|++||++||..|+.+++.....+ +..  ++..|+ .....|....-+...
T Consensus       118 ~~~~~L~e~la~~~~~~~~-------~v~~~~sGseA~~~Alk~a~~~~~~~-g~~--g~~~ii~~~~~yhg~~~~~~~~  187 (457)
T 3tfu_A          118 EPAARLAKLLVDITPAGLD-------TVFFSDSGSVSVEVAAKMALQYWRGR-GLP--GKRRLMTWRGGYHGDTFLAMSI  187 (457)
T ss_dssp             HHHHHHHHHHHHHSSTTEE-------EEEEESSHHHHHHHHHHHHHHHHHHT-TCT--TCCEEEEETTCCCCSSHHHHTT
T ss_pred             HHHHHHHHHHHHhCCCCcC-------EEEEeCcHHHHHHHHHHHHHHHHHhc-CCC--CCceEEEEcCCcCCccHHhhcc
Confidence            3445677888999875443       58999999999999999998753322 111  233444 444445433333222


Q ss_pred             cC----------CCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEec-CCccccccCC----hhHHHHHH
Q 037144          195 VG----------IDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATV-GTTAITAVDP----LKPLCDVA  259 (502)
Q Consensus       195 ~G----------lg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~-gtt~~G~idp----l~eI~~i~  259 (502)
                      .+          .....+..+|....+....|+++|+++|++..   ..+.+|++.. ..+++|.+-|    +++|.++|
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~~l~~~~---~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~  264 (457)
T 3tfu_A          188 CDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQLAQHA---GELAAVVVEPVVQGAGGMRFHDPRYLHDLRDIC  264 (457)
T ss_dssp             SCCC----------CCCCEEECCCCSSCCHHHHHHHHHHHHHHG---GGEEEEEECSSEECTTTCEECCTHHHHHHHHHH
T ss_pred             cCCcccccccccCCCCCceEecCCCcccCHHHHHHHHHHHHhCC---CCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHH
Confidence            11          00113455555432223468999999997532   1245677777 7788898866    99999999


Q ss_pred             HHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-cceEEEeeCchhhhhhhcC-Ccc-cccCccC
Q 037144          260 KQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-DCCCLWVKDPSCLLSTLST-NPQ-YLKNEAT  336 (502)
Q Consensus       260 ~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~-~~~-yl~~~~~  336 (502)
                      ++||++|++|++|.++......+.....++ ..|.+++  .|.++.++ ..|+++.++. . .+.+.. .+. +....  
T Consensus       265 ~~~gillI~DEv~~g~gr~G~~~a~~~~~~-~pdiit~--sK~l~gG~~~lG~v~~~~~-i-~~~~~~~~~~~~~~~~--  337 (457)
T 3tfu_A          265 RRYEVLLIFDEIATGFGRTGALFAADHAGV-SPDIMCV--GKALTGGYLSLAATLCTAD-V-AHTISAGAAGALMHGP--  337 (457)
T ss_dssp             HHHTCEEEEECTTTTTTTTSSSSTHHHHTC-CCSEEEE--CGGGGTTSSCCEEEEEEHH-H-HHHHHHSSSCSCCCCC--
T ss_pred             HHcCCEEEEEcCccCCccccchhHhHhcCC-CceEEEE--ChhhhCCCcceEEEEEcHH-H-HHHhhccCCCceeEec--
Confidence            999999999999976532211111111122 5677765  59887763 6888887644 2 223311 011 11100  


Q ss_pred             CCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCeEEecCCCeeEEEEE
Q 037144          337 DQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD---KRFEVAFPRNFSLVCFR  413 (502)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~---~~~~l~~~~~~~~v~f~  413 (502)
                                        +-...++.+.+++..+..-.-+++.++..++.+++++.|+++   |++..+ .+...++.+.
T Consensus       338 ------------------t~~~n~~a~aaa~aaL~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~v-r~~G~~~~i~  398 (457)
T 3tfu_A          338 ------------------TFMANPLACAVSVASVELLLGQDWRTRITELAAGLTAGLDTARALPAVTDV-RVCGAIGVIE  398 (457)
T ss_dssp             ------------------TTTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHGGGGGSTTEEEE-EECSSCEEEE
T ss_pred             ------------------CCCcCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcCCCeeee-ecCCeEEEEE
Confidence                              001133444444433321111245667777888888888764   455433 2334566666


Q ss_pred             eecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHH
Q 037144          414 VTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWT  493 (502)
Q Consensus       414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~  493 (502)
                      +....                          +  ..++.+.+.++|.++ .+.    ..++|++.. ...++++|+++++
T Consensus       399 l~~~~--------------------------~--~~~~~~~l~~~Gv~v-~~~----~~~lRi~p~-~~~t~eei~~~l~  444 (457)
T 3tfu_A          399 CDRPV--------------------------D--LAVATPAALDRGVWL-RPF----RNLVYAMPP-YICTPAEITQITS  444 (457)
T ss_dssp             ESSCC--------------------------C--HHHHHHHHHHTTEEC-CCB----TTEEEECCC-TTCCHHHHHHHHH
T ss_pred             ECCcc--------------------------c--HHHHHHHHHHCCeEE-Eec----CCEEEEECC-CCCCHHHHHHHHH
Confidence            54321                          0  245677777788643 321    248999864 4467789999999


Q ss_pred             HHHHHHHh
Q 037144          494 VVQEHLEA  501 (502)
Q Consensus       494 ~l~~~~~~  501 (502)
                      +|+++.++
T Consensus       445 ~L~~~l~~  452 (457)
T 3tfu_A          445 AMVEVARL  452 (457)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99998765

>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A

Probab=99.75  E-value=4.6e-16  Score=161.04  Aligned_cols=318  Identities=12%  Similarity=0.068  Sum_probs=178.5

Q ss_pred             HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEe-CCCCchhHHHHHH
Q 037144          115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYS-SDQTHCAFQKAAQ  193 (502)
Q Consensus       115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~-s~~~H~s~~~aa~  193 (502)
                      .+...++.++++++++.+..      ...+||+|||+||..|+.+++...         ++..|++ ....|....-+..
T Consensus       103 ~~~~~~la~~l~~~~~~~~~------~~v~~~~sGseA~~~Alk~a~~~~---------g~~~ii~~~~~yhG~~~~~~~  167 (451)
T 3oks_A          103 YEGYVAVCEQLNRLTPVRGD------KRSALFNSGSEAVENAVKIARSHT---------HKPAVVAFDHAYHGRTNLTMA  167 (451)
T ss_dssp             CHHHHHHHHHHHHHSSCCSS------EEEEEESSHHHHHHHHHHHHHHHH---------CCCEEEEETTCCCCSSHHHHH
T ss_pred             CHHHHHHHHHHHHhCCcCCC------CEEEEeCcHHHHHHHHHHHHHHhc---------CCCeEEEEcCCcCCccHHHHH
Confidence            45566788899999874321      158999999999999999888641         3344444 4444544433333


Q ss_pred             HcCCC----------CCCEEEEecCCC--------CC---cccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC-
Q 037144          194 IVGID----------RKNIRAIKTTKS--------SS---YGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP-  251 (502)
Q Consensus       194 ~~Glg----------~~~v~~v~~~~~--------~~---~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp-  251 (502)
                      +.|-.          ...++.+|....        +.   ..-+++.++++|++.. .+..+.+|++....+..|.+-| 
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~-~~~~~aavi~ep~~~~gG~~~~~  246 (451)
T 3oks_A          168 LTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAITVIDKQI-GADNLAAVVIEPIQGEGGFIVPA  246 (451)
T ss_dssp             HCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHHHHHHHHT-CGGGEEEEEECSSBTTTTCBCCC
T ss_pred             hcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHHHHHHHHhhc-CCCCEEEEEEcCCcCCCCccCCC
Confidence            32210          115677776410        00   0123555556665422 1123456666665666677766 


Q ss_pred             ---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCc
Q 037144          252 ---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNP  328 (502)
Q Consensus       252 ---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~  328 (502)
                         +++|.++|++||+++++|.+|.++......+.....++ ..|.+++  .|.++.+...|+++.++. .. +.+... 
T Consensus       247 ~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~-~pdi~t~--sK~l~~G~~iG~v~~~~~-~~-~~~~~~-  320 (451)
T 3oks_A          247 DGFLPTLLDWCRKNDVVFIADEVQTGFARTGAMFACEHEGI-DPDLIVT--AKGIAGGLPLSAVTGRAE-IM-DSPHVS-  320 (451)
T ss_dssp             TTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEE--CGGGGTTSSCEEEEEEHH-HH-TCSCTT-
T ss_pred             HHHHHHHHHHHHHcCCEEEEEecccCCCccccchhhhhcCC-CCCeeee--hhhhhCCcceEEEEECHH-HH-hhhcCC-
Confidence               99999999999999999999976533221111111122 4677765  499987778898877532 22 222110 


Q ss_pred             ccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHh----cCCCeEEecC
Q 037144          329 QYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVT----SDKRFEVAFP  404 (502)
Q Consensus       329 ~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~----~~~~~~l~~~  404 (502)
                        . ..                   .+-...++...+++..+..-.-.++.++..++.+++++.|+    +.|.+..+ +
T Consensus       321 --~-~~-------------------~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~  377 (451)
T 3oks_A          321 --G-LG-------------------GTYGGNPIACAAALATIETIESEGLVARAQQIEKIMKDRLGRLQAEDDRIGDV-R  377 (451)
T ss_dssp             --S-BC-------------------CSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE-E
T ss_pred             --C-cC-------------------CCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCeEEE-E
Confidence              0 00                   00011334444444433210012345555566666666554    45555443 2


Q ss_pred             CCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCc
Q 037144          405 RNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTM  484 (502)
Q Consensus       405 ~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~  484 (502)
                      +...++.+.+..... .                 ..   ......++.+.+.++|.++.+...  ...++|+++. ...+
T Consensus       378 ~~G~~~~~~~~~~~~-~-----------------~~---~~~~~~~~~~~l~~~Gv~v~~~~~--~~~~iRi~~~-~~~t  433 (451)
T 3oks_A          378 GRGAMIAMELVKAGT-T-----------------EP---DADLTKALCAGAHAAGVIVLSCGT--YGNVVRFLPP-LSIG  433 (451)
T ss_dssp             EETTEEEEEEBSTTS-C-----------------CB---CHHHHHHHHHHHHHTTEECEEECT--TSCEEEECCC-TTCC
T ss_pred             EeeEEEEEEEecCcc-C-----------------CC---CHHHHHHHHHHHHhCCcEEecCCC--CCCEEEEECC-CCCC
Confidence            333456665532100 0                 00   022345678888888976544322  1257999864 4467


Q ss_pred             HHHHHHHHHHHHHHHHh
Q 037144          485 ESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       485 ~~di~~~~~~l~~~~~~  501 (502)
                      +++|+++++.|++++++
T Consensus       434 ~e~i~~~l~~l~~~l~~  450 (451)
T 3oks_A          434 DDLLNEGLDVLEEVLRG  450 (451)
T ss_dssp             HHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHhh
Confidence            78999999999988764

>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*

Probab=99.75  E-value=3.4e-16  Score=162.44  Aligned_cols=322  Identities=11%  Similarity=0.024  Sum_probs=181.1

Q ss_pred             HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEe-CCCCchhHHHHHH
Q 037144          115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYS-SDQTHCAFQKAAQ  193 (502)
Q Consensus       115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~-s~~~H~s~~~aa~  193 (502)
                      .+...++.++++++++.+.+       .++|++||++|+..|+.+++.....+ +..  ++..|++ ....|....-+..
T Consensus        93 ~~~~~~la~~l~~~~~~~~~-------~v~~~~ggseA~~~al~~~~~~~~~~-g~~--~~~~vi~~~~~yhg~~~~~~~  162 (459)
T 4a6r_A           93 HPAVVELSSLLAEVTPAGFD-------RVFYTNSGSESVDTMIRMVRRYWDVQ-GKP--EKKTLIGRWNGYHGSTIGGAS  162 (459)
T ss_dssp             CHHHHHHHHHHHHHSCTTCC-------EEEEESSHHHHHHHHHHHHHHHHHHT-TCT--TCCEEEEETTCCCCSSHHHHH
T ss_pred             CHHHHHHHHHHHHhCCCCCC-------EEEEeCchHHHHHHHHHHHHHHHHhc-CCC--CCCEEEEECCCcCCccHHHHh
Confidence            45666788899999876543       58999999999999999998753221 111  2344444 4444543333333


Q ss_pred             HcCCC---------CCCEEEEecCC--C-CCcccC--------HHHHHHHHHHHHhcCCccEEEEEecCCccccccCC--
Q 037144          194 IVGID---------RKNIRAIKTTK--S-SSYGLS--------AESVLSQINLDVEAELIPLFLCATVGTTAITAVDP--  251 (502)
Q Consensus       194 ~~Glg---------~~~v~~v~~~~--~-~~~~~d--------~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp--  251 (502)
                      ..|..         ...+..++...  . +++ +|        +++|+++|++...  ..+.+|++....++.|.+-|  
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~~~~~~~le~~i~~~~~--~~~~~vi~ep~~~~~G~~~~~~  239 (459)
T 4a6r_A          163 LGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFGVVAARWLEEKILEIGA--DKVAAFVGEPIQGAGGVIVPPA  239 (459)
T ss_dssp             HSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHHCG--GGEEEEEECSSBTTTTCBCCCT
T ss_pred             hcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHHcCC--CCEEEEEECCccCCCCcccCCH
Confidence            32321         11455566432  0 112 45        7889998875211  12456777777777788877  


Q ss_pred             --hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCc
Q 037144          252 --LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNP  328 (502)
Q Consensus       252 --l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~  328 (502)
                        +++|.++|++||+++++|.+|.++......+.....++ ..|.++++  |.++.+ ...|+++.++ +.. +.+....
T Consensus       240 ~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~~~~~~~~-~pdi~t~s--K~l~gg~~~lg~v~~~~-~i~-~~~~~~~  314 (459)
T 4a6r_A          240 TYWPEIERICRKYDVLLVADEVICGFGRTGEWFGHQHFGF-QPDLFTAA--KGLSSGYLPIGAVFVGK-RVA-EGLIAGG  314 (459)
T ss_dssp             THHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTC-CCSEEEEC--GGGGTTSSCCEEEEECH-HHH-HHHHHHC
T ss_pred             HHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCC-CCCeeehh--hhhcCCCCCccceeeCH-HHH-HHhhcCC
Confidence              99999999999999999999977533221111111122 46777765  988765 5788887743 332 2222100


Q ss_pred             ccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh---cHHHHHHHHHHHH-HHHHHHHHH----HhcCCCeE
Q 037144          329 QYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF---GVANLRNFIRSHV-GMAKLFERL----VTSDKRFE  400 (502)
Q Consensus       329 ~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---g~~g~~~~~~~~~-~la~~l~~~----l~~~~~~~  400 (502)
                      .+....                +.    ...++.+.+++..+   ..+   +++++.. ++.+++++.    |.+.|.+.
T Consensus       315 ~~~~~~----------------t~----~~~~~~~aaa~aal~~~~~~---~~~~~~~~~~~~~~~~~l~~~l~~~~~~~  371 (459)
T 4a6r_A          315 DFNHGF----------------TY----SGHPVCAAVAHANVAALRDE---GIVQRVKDDIGPYMQKRWRETFSRFEHVD  371 (459)
T ss_dssp             TTHHHH----------------HH----CSCHHHHHHHHHHHHHHHHT---CHHHHHHHTHHHHHHHHHHHHHTTCTTEE
T ss_pred             CcccCC----------------CC----CCCHHHHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence            010000                00    01233333333333   222   3344444 444444444    45556555


Q ss_pred             EecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecC
Q 037144          401 VAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGN  480 (502)
Q Consensus       401 l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~  480 (502)
                      .+ ++...++.|.+.......           .      ..........++.+.+.++|.++.+.    + .++|++.. 
T Consensus       372 ~~-~~~g~~~~~~~~~~~~~~-----------~------~~~~~~~~~~~~~~~l~~~Gv~v~~~----g-~~iRi~~~-  427 (459)
T 4a6r_A          372 DV-RGVGMVQAFTLVKNKAKR-----------E------LFPDFGEIGTLCRDIFFRNNLIMRAC----G-DHIVSAPP-  427 (459)
T ss_dssp             EE-EEETTEEEEEECSBTTTT-----------B------CCSSTTHHHHHHHHHHHHTTEECEEE----T-TEEEECCC-
T ss_pred             EE-EEEEEEEEEEEecCcccc-----------c------cccchHHHHHHHHHHHHHCCeEEecC----C-CEEEEECC-
Confidence            44 333445666654321000           0      00000123456778888888754443    2 68999864 


Q ss_pred             CCCcHHHHHHHHHHHHHHHHh
Q 037144          481 SMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       481 ~~t~~~di~~~~~~l~~~~~~  501 (502)
                      ...+++++++++++|+++.++
T Consensus       428 ~~~t~e~i~~~l~~l~~~l~~  448 (459)
T 4a6r_A          428 LVMTRAEVDEMLAVAERCLEE  448 (459)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHH
Confidence            456778999999999887653

>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}

Probab=99.74  E-value=6.2e-16  Score=160.90  Aligned_cols=326  Identities=10%  Similarity=0.030  Sum_probs=185.8

Q ss_pred             HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH
Q 037144          115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI  194 (502)
Q Consensus       115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~  194 (502)
                      .+...++.+.++++++.+.+       .++|++||++||..|+.+++.....+ |..+ ++.+|......|....-+...
T Consensus        98 ~~~~~~lae~l~~~~~~~~~-------~v~~~~sGseA~~~aik~a~~~~~~~-g~~~-~~~ii~~~~~yHg~t~~~~~~  168 (472)
T 3hmu_A           98 HVPAIALAQKLAELAPGDLN-------HVFFAGGGSEANDTNIRMVRTYWQNK-GQPE-KTVIISRKNAYHGSTVASSAL  168 (472)
T ss_dssp             CHHHHHHHHHHHHHSCTTEE-------EEEEESSHHHHHHHHHHHHHHHHHHT-TCTT-CCEEEEETTCCCCSSHHHHHH
T ss_pred             CHHHHHHHHHHHHhCCCCCC-------EEEEeCCHHHHHHHHHHHHHHHHHhc-CCCC-CCEEEEEcCcCCCccHHhhhc
Confidence            34555677778888865433       58999999999999999998753221 2111 233444454455443333333


Q ss_pred             cCC--------CCCCEEEEecCC--C-CCcccC--------HHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----
Q 037144          195 VGI--------DRKNIRAIKTTK--S-SSYGLS--------AESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----  251 (502)
Q Consensus       195 ~Gl--------g~~~v~~v~~~~--~-~~~~~d--------~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----  251 (502)
                      .|.        ....+..+|...  . .++ +|        +++|+++|++...  ..+.+|++....++.|.+-|    
T Consensus       169 ~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~-~~~~~~~~~~~~~le~~i~~~~~--~~~aavi~epv~~~gG~~~~~~~~  245 (472)
T 3hmu_A          169 GGMAGMHAQSGLIPDVHHINQPNWWAEGGD-MDPEEFGLARARELEEAILELGE--NRVAAFIAEPVQGAGGVIVAPDSY  245 (472)
T ss_dssp             SCCHHHHHTTCCCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHHCG--GGEEEEEECSSBSTTTCBCCCTTH
T ss_pred             cCChhhccccCCCCCcEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHhcCC--CCEEEEEEcCccCCCCcccCCHHH
Confidence            221        111466666432  0 011 34        7889998874211  22457777777778888887    


Q ss_pred             hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCccc
Q 037144          252 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQY  330 (502)
Q Consensus       252 l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~y  330 (502)
                      +++|.++|++||++|++|.+|.++......+.....++ ..|.++++  |.++.+ ...|+++.++. . .+.+.. ..+
T Consensus       246 l~~l~~l~~~~gillI~DEv~~gfgr~G~~~a~~~~~v-~pdi~t~s--K~l~gg~~plG~v~~~~~-i-~~~~~~-~~~  319 (472)
T 3hmu_A          246 WPEIQRICDKYDILLIADEVICGFGRTGNWFGTQTMGI-RPHIMTIA--KGLSSGYAPIGGSIVCDE-V-AHVIGK-DEF  319 (472)
T ss_dssp             HHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTC-CCSEEEEC--GGGTTTSSCCEEEEEEHH-H-HHHHTT-SCB
T ss_pred             HHHHHHHHHHcCCEEEEEccccCCcccCccchhHHhCC-CCceeeec--hhhhcCCcceEEEEECHH-H-HHhccc-CCc
Confidence            99999999999999999999987533221111111233 56888765  998765 46788877543 2 233311 111


Q ss_pred             ccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHH-HHHHHHHHHHhcC---CCeEEecCCC
Q 037144          331 LKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHV-GMAKLFERLVTSD---KRFEVAFPRN  406 (502)
Q Consensus       331 l~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~-~la~~l~~~l~~~---~~~~l~~~~~  406 (502)
                      ....                    +-...++.+.+++..+..-.-++++++.. ++.+++++.|+++   |.+..+ .+.
T Consensus       320 ~~~~--------------------t~~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~v-r~~  378 (472)
T 3hmu_A          320 NHGY--------------------TYSGHPVAAAVALENLRILEEENILDHVRNVAAPYLKEKWEALTDHPLVGEA-KIV  378 (472)
T ss_dssp             CCCC--------------------TTTTCHHHHHHHHHHHHHHHHTTHHHHHHHTHHHHHHHHHHGGGGSTTEEEE-EEE
T ss_pred             cccC--------------------CCCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-Eec
Confidence            1000                    00113344444444332111134566666 6777777777554   444443 233


Q ss_pred             eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHH
Q 037144          407 FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMES  486 (502)
Q Consensus       407 ~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~  486 (502)
                      ..++.|.+.......               ..... ........+.+.+.++|.++.+.    + .++|++.. ...+++
T Consensus       379 G~~~~i~~~~~~~~~---------------~~~~~-~~~~~~~~~~~~l~~~Gv~v~~~----g-~~iRi~p~-~~~t~e  436 (472)
T 3hmu_A          379 GMMASIALTPNKASR---------------AKFAS-EPGTIGYICRERCFANNLIMRHV----G-DRMIISPP-LVITPA  436 (472)
T ss_dssp             TTEEEEEECSCGGGT---------------CCBSS-CTTHHHHHHHHHHHHTTBCCEEE----T-TEEEECCC-TTCCHH
T ss_pred             CceEEEEEecCcccc---------------ccccc-hhHHHHHHHHHHHHHCCcEEEec----C-CEEEEECC-CCCCHH
Confidence            446666664321000               00000 00123456778888889755443    2 68999853 446778


Q ss_pred             HHHHHHHHHHHHHHh
Q 037144          487 HVRAAWTVVQEHLEA  501 (502)
Q Consensus       487 di~~~~~~l~~~~~~  501 (502)
                      +|++++++|+++.++
T Consensus       437 ~i~~~l~~l~~~l~~  451 (472)
T 3hmu_A          437 EIDEMFVRIRKSLDE  451 (472)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999987653

>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}

Probab=99.74  E-value=1.7e-15  Score=157.88  Aligned_cols=327  Identities=11%  Similarity=0.051  Sum_probs=189.0

Q ss_pred             HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH
Q 037144          115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI  194 (502)
Q Consensus       115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~  194 (502)
                      .+...++.+|++++++.+.+       .++|++||++||..|+.+++.....+ |..+ ++.+|......|....-+...
T Consensus        96 ~~~~~~la~~l~~~~~~~~~-------~v~~~~sGseA~~~Aik~a~~~~~~~-g~~~-~~~vi~~~~~yHg~~~~~~~~  166 (476)
T 3i5t_A           96 TSPAARLAEKIATLTPGDLN-------RIFFTTGGSTAVDSALRFSEFYNNVL-GRPQ-KKRIIVRYDGYHGSTALTAAC  166 (476)
T ss_dssp             CHHHHHHHHHHHTTSSTTCC-------EEEEESSHHHHHHHHHHHHHHHHHHT-TCTT-CCEEEEETTCCCCSSHHHHHT
T ss_pred             CHHHHHHHHHHHhcCCCCcC-------EEEEeCchHHHHHHHHHHHHHHHHhc-CCCC-CCEEEEEcCCcCcCChhhccc
Confidence            45667788999999865433       58999999999999999998764332 2111 233444455556544444433


Q ss_pred             cCCC---------CCCEEEEecCCCCC-cccC--------HHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----h
Q 037144          195 VGID---------RKNIRAIKTTKSSS-YGLS--------AESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----L  252 (502)
Q Consensus       195 ~Glg---------~~~v~~v~~~~~~~-~~~d--------~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l  252 (502)
                      .|..         ...+..++....-+ +..|        +++||++|++..  ...+.+|++....++.|.+-|    |
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~le~~i~~~~--~~~~aavi~ep~~~~~G~~~~~~~~L  244 (476)
T 3i5t_A          167 TGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQEFEDRIESLG--PDTIAAFLAEPILASGGVIIPPAGYH  244 (476)
T ss_dssp             CCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHHHHHHHHHHHHHC--GGGEEEEEECSSBTTTTSBCCCTTHH
T ss_pred             cCChhhccccCCCCCCcEEeCCCcccccCCCchHHHHHHHHHHHHHHHHhcC--CCCEEEEEECCccCCCCcccCCHHHH
Confidence            3321         12345555432000 1223        789999887521  123457777777778887665    9


Q ss_pred             hHHHHHHHHhCCEEEeecccccccccCccchhh-hcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCc--
Q 037144          253 KPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF-IDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNP--  328 (502)
Q Consensus       253 ~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~-~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~--  328 (502)
                      ++|.++|++||++|++|.+|.++......+... ..++ ..|.++++  |.++.+ ...|+++.++ +. .+.+....  
T Consensus       245 ~~l~~lc~~~gillI~DEv~~g~gr~G~~~~~~~~~~v-~pdi~t~s--K~l~~G~~plg~v~~~~-~i-~~~~~~~~~~  319 (476)
T 3i5t_A          245 ARFKAICEKHDILYISDEVVTGFGRCGEWFASEKVFGV-VPDIITFA--KGVTSGYVPLGGLAISE-AV-LARISGENAK  319 (476)
T ss_dssp             HHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHTTCC-CCSEEEEC--GGGGTTSSCCEEEEECH-HH-HHTTSGGGCT
T ss_pred             HHHHHHHHHcCCEEEEEecccCCccccCceeeecccCC-Ccchhhhh--hhhcCCCcCeEEEEECH-HH-HHHHhcCCcc
Confidence            999999999999999999998753322211111 1233 46788765  998876 5778887743 32 22332110  


Q ss_pred             --ccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCeEEec
Q 037144          329 --QYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD---KRFEVAF  403 (502)
Q Consensus       329 --~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~---~~~~l~~  403 (502)
                        .+...                    .+-...++.+.+++..+..-.-+++.++..++.+++++.|+++   |.+..+ 
T Consensus       320 ~~~~~~~--------------------~t~~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~v-  378 (476)
T 3i5t_A          320 GSWFTNG--------------------YTYSNQPVACAAALANIELMEREGIVDQAREMADYFAAALASLRDLPGVAET-  378 (476)
T ss_dssp             TCEECCC--------------------CTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTTTTSTTEEEE-
T ss_pred             ccccccc--------------------CCCCcCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-
Confidence              01100                    0001133444444443321111356677778888888888764   334333 


Q ss_pred             CCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCC
Q 037144          404 PRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMT  483 (502)
Q Consensus       404 ~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t  483 (502)
                      .+...++.+.+.......                 ............+.+.+.++|.++.+.    | .++|++.. ...
T Consensus       379 ~~~G~~~~i~~~~~~~~~-----------------~~~~~~~~~~~~~~~~l~~~Gv~v~~~----g-~~iRi~p~-l~~  435 (476)
T 3i5t_A          379 RSVGLVGCVQCLLDPTRA-----------------DGTAEDKAFTLKIDERCFELGLIVRPL----G-DLCVISPP-LII  435 (476)
T ss_dssp             EEETTEEEEEECCC----------------------CCHHHHHHHHHHHHHHHHTTEECEEE----T-TEEEECCC-TTC
T ss_pred             EecCceeEEEEecCcccc-----------------ccccchhHHHHHHHHHHHHCCCEEEec----C-CEEEEECC-CCC
Confidence            233345556554321000                 000001223567788888888654332    3 68999853 446


Q ss_pred             cHHHHHHHHHHHHHHHHh
Q 037144          484 MESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       484 ~~~di~~~~~~l~~~~~~  501 (502)
                      ++++|++++++|+++.++
T Consensus       436 t~e~i~~~l~~l~~~l~~  453 (476)
T 3i5t_A          436 SRAQIDEMVAIMRQAITE  453 (476)
T ss_dssp             CHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHH
Confidence            788999999999987653

>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*

Probab=99.74  E-value=7.1e-16  Score=160.07  Aligned_cols=329  Identities=12%  Similarity=0.022  Sum_probs=182.9

Q ss_pred             HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEe-CCCCchhHHHHHH
Q 037144          115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYS-SDQTHCAFQKAAQ  193 (502)
Q Consensus       115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~-s~~~H~s~~~aa~  193 (502)
                      .+...++.++++++++.+.+       ..+||+||++||..|+.+++.....+ |..  ++..|++ ....|....-+..
T Consensus        94 ~~~~~~la~~l~~~~~~~~~-------~v~~~~gGseA~~~al~~~~~~~~~~-g~~--~~~~vi~~~~~yhg~~~~~~~  163 (460)
T 3gju_A           94 TEASITLAKMIIDRAPKGMS-------RVYFGLSGSDANETNIKLIWYYNNVL-GRP--EKKKIISRWRGYHGSGVMTGS  163 (460)
T ss_dssp             CHHHHHHHHHHHHHSCTTEE-------EEEEESSHHHHHHHHHHHHHHHHHHT-TCT--TCCEEEEETTCCCCSSHHHHH
T ss_pred             CHHHHHHHHHHHhhCCCCcC-------EEEEeCchHHHHHHHHHHHHHHHHhc-CCC--CCCEEEEECCCcCCCCHHHhh
Confidence            34566778888888765443       58999999999999999998643221 111  3344444 4444544444444


Q ss_pred             HcCC---------CCCCEEEEecCCC---CCcccC--------HHHHHHHHHHHHhcCCccEEEEEecCCccccccCC--
Q 037144          194 IVGI---------DRKNIRAIKTTKS---SSYGLS--------AESVLSQINLDVEAELIPLFLCATVGTTAITAVDP--  251 (502)
Q Consensus       194 ~~Gl---------g~~~v~~v~~~~~---~~~~~d--------~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp--  251 (502)
                      ..|.         ....++.+|....   ++..++        +++|+++|++..  ...+.+|++....+++|.+-|  
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~le~~i~~~~--~~~~aaii~ep~~~~~G~~~~~~  241 (460)
T 3gju_A          164 LTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADKLEEMILAEG--PETIAAFIGEPILGTGGIVPPPA  241 (460)
T ss_dssp             HCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHHHHHHHHHHHC--GGGEEEEEECSSBSTTTSBCCCT
T ss_pred             ccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHHHHHHHHHHHHHhcC--CCCEEEEEECCccCCCCCccCCH
Confidence            3222         1124667764320   011233        688999887421  123457777777777888766  


Q ss_pred             --hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCC-
Q 037144          252 --LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTN-  327 (502)
Q Consensus       252 --l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~-  327 (502)
                        +++|.++|++||++|++|.+|.++......+.....++ ..|.++++  |.++.+ ...|+++.++. . .+.+... 
T Consensus       242 ~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~-~pdi~t~s--K~l~gG~~~lg~v~~~~~-i-~~~~~~~~  316 (460)
T 3gju_A          242 GYWEKIQAVLKKYDVLLVADEVVTGFGRLGTMFGSDHYGI-KPDLITIA--KGLTSAYAPLSGVIVADR-V-WQVLVQGS  316 (460)
T ss_dssp             THHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTC-CCSEEEEC--GGGTTTSSCCEEEEEEHH-H-HHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCC-CCCeeeee--hhhcCCCCCeEEEEECHH-H-HHHHhccc
Confidence              99999999999999999999986533221111111122 46777765  998776 47888877543 2 2222110 


Q ss_pred             --cccccCccCCCCCcccccCCCcccccCCCCCCchHHHH---HHHHhcHHH-HHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 037144          328 --PQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWV---VIRNFGVAN-LRNFIRSHVGMAKLFERLVTSDKRFEV  401 (502)
Q Consensus       328 --~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~---~l~~~g~~g-~~~~~~~~~~la~~l~~~l~~~~~~~l  401 (502)
                        ...+....                   +-...++.+.+   +++.+..+. ++...+....+.+.|.+.+.+.|.+..
T Consensus       317 ~~~~~~~~~~-------------------t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~  377 (460)
T 3gju_A          317 DKLGSLGHGW-------------------TYSAHPICVAAGVANLELIDEMDLVTNAGETGAYFRAELAKAVGGHKNVGE  377 (460)
T ss_dssp             HHHCSCSCCC-------------------TTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTSTTEEE
T ss_pred             ccccccccCC-------------------CCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Confidence              00010000                   00112333333   343332222 233333333444455555566666554


Q ss_pred             ecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCC
Q 037144          402 AFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNS  481 (502)
Q Consensus       402 ~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~  481 (502)
                      + .+...++.+.+.......           .    ...  .......++.+.+.++|.++.+..   +..++|++.. .
T Consensus       378 ~-~~~g~~~~~~~~~~~~~~-----------~----~~~--~~~~~~~~~~~~l~~~Gv~v~~~~---~~~~iRi~~~-~  435 (460)
T 3gju_A          378 V-RGDGMLAAVEFVADKDDR-----------V----FFD--ASQKIGPQVATALAASGVIGRAMP---QGDILGFAPP-L  435 (460)
T ss_dssp             E-EEETTEEEEEECSBTTTT-----------B----CCC--GGGCHHHHHHHHHHHTTEECEECS---SSCEEEECCC-T
T ss_pred             E-eeeeEEEEEEEccCcccc-----------c----ccc--chHHHHHHHHHHHHHCCeEEecCC---CCCEEEEECC-C
Confidence            4 333445666554321000           0    000  001234567788888897544332   3468999864 4


Q ss_pred             CCcHHHHHHHHHHHHHHHHh
Q 037144          482 MTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       482 ~t~~~di~~~~~~l~~~~~~  501 (502)
                      ..++++|++++++|+++.++
T Consensus       436 ~~t~e~i~~~l~~l~~~l~~  455 (460)
T 3gju_A          436 CLTREQADIVVSKTADAVKS  455 (460)
T ss_dssp             TCCHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHH
Confidence            46778999999999987654

>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*

Probab=99.74  E-value=1.4e-16  Score=163.82  Aligned_cols=312  Identities=13%  Similarity=0.039  Sum_probs=173.1

Q ss_pred             HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCC-eEEEeCCCCchhHHHHHHHc
Q 037144          117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISK-LVVYSSDQTHCAFQKAAQIV  195 (502)
Q Consensus       117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~-~~v~~s~~~H~s~~~aa~~~  195 (502)
                      ...++.+.++++++ ..+       ..+|++|||+|+..|+.+++...         ++ .+|..+...|.....+....
T Consensus        94 ~~~~l~~~la~~~~-~~~-------~v~~~~~Gsea~~~ai~~a~~~~---------~~~~vi~~~~~yhg~~~~~~~~~  156 (429)
T 3k28_A           94 IENKLAKLVIERVP-SIE-------IVRMVNSGTEATMSALRLARGYT---------GRNKILKFIGCYHGHGDSLLIKA  156 (429)
T ss_dssp             HHHHHHHHHHHHST-TCS-------EEEEESSHHHHHHHHHHHHHHHH---------TCCEEEEEETCCCCSCGGGCSSC
T ss_pred             HHHHHHHHHHHhCC-CCC-------EEEEeCChHHHHHHHHHHHHHhh---------CCCEEEEECCCcCCCcHHHHHhc
Confidence            33445566777775 222       58999999999999999887631         33 34444444554433333223


Q ss_pred             CCCCCCEEEEecCCCCCcc------------cCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHHH
Q 037144          196 GIDRKNIRAIKTTKSSSYG------------LSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDVA  259 (502)
Q Consensus       196 Glg~~~v~~v~~~~~~~~~------------~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~  259 (502)
                      |.   .+..++........            -|+++|++++++...   .+.+|++....+++|.+.|    +++|.++|
T Consensus       157 g~---~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~---~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~  230 (429)
T 3k28_A          157 GS---GVATLGLPDSPGVPEGVAKNTITVAYNDLESVKYAFEQFGD---DIACVIVEPVAGNMGVVPPQPGFLEGLREVT  230 (429)
T ss_dssp             CT---TC-----CCCTTCCHHHHTTEEEEETTCHHHHHHHHHHHGG---GEEEEEECSSBCTTSCBCCCTTHHHHHHHHH
T ss_pred             CC---cccccCCCCcCCCCCcccCceeecCCCCHHHHHHHHHhCCC---CEEEEEEcCCCCCCCcccCCHHHHHHHHHHH
Confidence            32   22222111100000            189999999975321   2456777777777888888    99999999


Q ss_pred             HHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCC
Q 037144          260 KQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQE  339 (502)
Q Consensus       260 ~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~  339 (502)
                      ++||+++|+|++|.++ ...........++ ..|.+++  .|.++++...|+++.++ +.. +.+.........      
T Consensus       231 ~~~~~~li~DEv~~g~-~~g~~~~~~~~~~-~~di~t~--sK~~~~G~~iG~~~~~~-~~~-~~~~~~~~~~~~------  298 (429)
T 3k28_A          231 EQNGALLIFDEVMTGF-RVAYNCGQGYYGV-TPDLTCL--GKVIGGGLPVGAYGGKA-EIM-RQVAPSGPIYQA------  298 (429)
T ss_dssp             HHHTCEEEEECTTTTT-TSSTTHHHHHHTC-CCSEEEE--CGGGGTTSCCEEEEECH-HHH-TTBTTTSSBCCC------
T ss_pred             HHcCCEEEEecccccc-ccCcchHHHHhCC-CCceehh--hhhhcCCCCeEEEEEcH-HHH-hhhccCCCcccc------
Confidence            9999999999999765 3221111111122 4577665  59998777888887753 332 222211111000      


Q ss_pred             CcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEecCCCeeEEEEEee
Q 037144          340 PKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD----KRFEVAFPRNFSLVCFRVT  415 (502)
Q Consensus       340 ~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~----~~~~l~~~~~~~~v~f~~~  415 (502)
                                    .+-....+.+.+++..+.... ++++++..++++++++.|+++    +.+..+ ++..+++.|.+.
T Consensus       299 --------------~t~~~~~~a~aaa~aal~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~g~~~~~~~~  362 (429)
T 3k28_A          299 --------------GTLSGNPLAMAAGYETLVQLT-PESYVEFERKAEMLEAGLRKAAEKHGIPHHI-NRAGSMIGIFFT  362 (429)
T ss_dssp             --------------CTTTTCHHHHHHHHHHHHTCC-HHHHHHHHHHHHHHHHHHHHHHHHTTCCCEE-EEETTEEEEESS
T ss_pred             --------------CCCCCChHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhCCCCEEE-EeeccEEEEEEe
Confidence                          001113344444444332111 567777778888888777653    332222 223345566553


Q ss_pred             cCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHH
Q 037144          416 PSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVV  495 (502)
Q Consensus       416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l  495 (502)
                      .......          ..   .  .........++.+.+.++|.++ .+.   +...+|+++   ..+++++++++++|
T Consensus       363 ~~~~~~~----------~~---~--~~~~~~~~~~~~~~l~~~Gv~v-~~~---~~~~~r~~~---~~t~e~i~~~l~~l  420 (429)
T 3k28_A          363 DEPVINY----------DA---A--KSSNLQFFAAYYREMVEQGVFL-PPS---QFEGLFLST---VHSDADIEATIAAA  420 (429)
T ss_dssp             SSCCCSH----------HH---H--TTSCHHHHHHHHHHHHHTTEEC-CSS---TTSCBCCCT---TCCHHHHHHHHHHH
T ss_pred             cCCcccc----------cc---c--ccccHHHHHHHHHHHHHCCeEE-ecC---CCCCEEEEC---CCCHHHHHHHHHHH
Confidence            2210000          00   0  0000223456778888888643 332   234577753   46788999999999


Q ss_pred             HHHHHh
Q 037144          496 QEHLEA  501 (502)
Q Consensus       496 ~~~~~~  501 (502)
                      +++.++
T Consensus       421 ~~~l~~  426 (429)
T 3k28_A          421 EIAMSK  426 (429)
T ss_dssp             HHHHHT
T ss_pred             HHHHHH
Confidence            998765

>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*

Probab=99.74  E-value=1.9e-15  Score=156.33  Aligned_cols=324  Identities=10%  Similarity=0.014  Sum_probs=172.7

Q ss_pred             HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCC-chhHHHHHH
Q 037144          115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQT-HCAFQKAAQ  193 (502)
Q Consensus       115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~-H~s~~~aa~  193 (502)
                      .+...++.++++++++...+       .++||+|||+|+..|+.+++...... |..  .++.|++.+.+ |.+...+..
T Consensus        86 ~~~~~~la~~l~~~~~~~~~-------~v~~~~sGseA~~~al~~~~~~~~~~-G~~--~~~~vi~~~~~yhg~~~~~~~  155 (448)
T 3dod_A           86 NVPATQLAETLIDISPKKLT-------RVFYSDSGAEAMEIALKMAFQYWKNI-GKP--EKQKFIAMKNGYHGDTIGAVS  155 (448)
T ss_dssp             EHHHHHHHHHHHHHSCTTEE-------EEEEESSHHHHHHHHHHHHHHHHHHT-TCT--TCCEEEEEC------------
T ss_pred             CHHHHHHHHHHHHhCCCCCC-------EEEEeCchHHHHHHHHHHHHHHHHhh-CCC--CCCEEEEECCCCCCccHHHHH
Confidence            44566788899999865433       58999999999999999998753221 100  14555555555 433333333


Q ss_pred             HcCCC---------CCCEEEEecCCCCCccc-----------CHHHHHHHHHHHHhcCCccEEEEEecCC-ccccccCC-
Q 037144          194 IVGID---------RKNIRAIKTTKSSSYGL-----------SAESVLSQINLDVEAELIPLFLCATVGT-TAITAVDP-  251 (502)
Q Consensus       194 ~~Glg---------~~~v~~v~~~~~~~~~~-----------d~~~Le~~i~~~~~~g~~p~~Vv~t~gt-t~~G~idp-  251 (502)
                      ..|..         ...+..+|.+.  .++.           |+++||++|+...   ..+.+|++.... ++.|.+-| 
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~d~~~le~~l~~~~---~~~a~vi~ep~~~~~~G~~~~~  230 (448)
T 3dod_A          156 VGSIELFHHVYGPLMFESYKAPIPY--VYRSESGDPDECRDQCLRELAQLLEEHH---EEIAALSIESMVQGASGMIVMP  230 (448)
T ss_dssp             -----------------CEEECCCC--CTTSSSCCHHHHHHHHHHHHHHHHHHHG---GGEEEEEEESSEESTTTCEECC
T ss_pred             hcCCccccccccCCCCCceEeCCCc--cccCCccchhhhhHHHHHHHHHHHHhCC---CCEEEEEEeCcccCCCCeecCC
Confidence            22210         01345555532  2232           5899999997321   124466666665 77887755 


Q ss_pred             ---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-cceEEEeeCchhhhhhhcCC
Q 037144          252 ---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-DCCCLWVKDPSCLLSTLSTN  327 (502)
Q Consensus       252 ---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~  327 (502)
                         +++|.++|++||++|++|.+|.++......+.....++ ..|.++++  |.++.++ ..|+++.++. . .+.+...
T Consensus       231 ~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~-~~di~t~s--K~l~~G~~~ig~v~~~~~-~-~~~~~~~  305 (448)
T 3dod_A          231 EGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMFACEHENV-QPDLMAAG--KGITGGYLPIAVTFATED-I-YKAFYDD  305 (448)
T ss_dssp             TTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGGTTSSCCEEEEEEHH-H-HHTTCSC
T ss_pred             HHHHHHHHHHHHHhCCEEEEeccccCCCcccchhhhhhcCC-CCCEEEec--ccccCCcCceEEEEECHH-H-HHHhhhc
Confidence               99999999999999999999986533221111111122 46777654  9998764 7888877543 2 2233220


Q ss_pred             ---cccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHh---cCCCeEE
Q 037144          328 ---PQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVT---SDKRFEV  401 (502)
Q Consensus       328 ---~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~---~~~~~~l  401 (502)
                         ...+...                   .+-...++.+.+++..+..-.-+++.++..++.+++++.|+   ..|.+..
T Consensus       306 ~~~~~~~~~~-------------------~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~  366 (448)
T 3dod_A          306 YENLKTFFHG-------------------HSYTGNQLGCAVALENLALFESENIVEQVAEKSKKLHFLLQDLHALPHVGD  366 (448)
T ss_dssp             GGGCCCCCCC-------------------CTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTSTTEEE
T ss_pred             cccCCccccc-------------------CCCCcCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcCCCeEE
Confidence               0000000                   00111333333333333110012345555556666665554   4444433


Q ss_pred             ecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCC
Q 037144          402 AFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNS  481 (502)
Q Consensus       402 ~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~  481 (502)
                      + .+...++.+.+.......           .    .....  .....++.+.+.++|.++ .+.   + .++|++.. .
T Consensus       367 ~-~~~g~~~~~~~~~~~~~~-----------~----~~~~~--~~~~~~~~~~l~~~Gv~~-~~~---~-~~iRi~~~-~  422 (448)
T 3dod_A          367 I-RQLGFMCGAELVRSKETK-----------E----PYPAD--RRIGYKVSLKMRELGMLT-RPL---G-DVIAFLPP-L  422 (448)
T ss_dssp             E-EEETTEEEEEECSBTTTT-----------B----CCCGG--GCHHHHHHHHHHHTTEEC-CEE---T-TEEEECCC-T
T ss_pred             E-EeeeEEEEEEEccCcccc-----------c----ccchh--hHHHHHHHHHHHHCCcEE-ecc---C-CEEEEECC-C
Confidence            2 223345556554321000           0    00000  011346777777888654 332   2 68999864 4


Q ss_pred             CCcHHHHHHHHHHHHHHHHh
Q 037144          482 MTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       482 ~t~~~di~~~~~~l~~~~~~  501 (502)
                      ..++++|++++++|+++.++
T Consensus       423 ~~t~e~i~~~l~~l~~~l~~  442 (448)
T 3dod_A          423 ASTAEELSEMVAIMKQAIHE  442 (448)
T ss_dssp             TCCHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHH
Confidence            56778999999999988754

>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}

Probab=99.73  E-value=2.1e-17  Score=169.57  Aligned_cols=225  Identities=10%  Similarity=-0.001  Sum_probs=153.0

Q ss_pred             HHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCC-CCchhHHHHHHH--
Q 037144          118 ENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSD-QTHCAFQKAAQI--  194 (502)
Q Consensus       118 e~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~-~~H~s~~~aa~~--  194 (502)
                      ..++.+++++++|.+...      .-++++|||+|+..++.+...           +++.|+++. ..|.++...+.+  
T Consensus        67 ~~~l~~~la~~~g~~~~~------~~i~~~sGt~Ai~~al~al~~-----------~Gd~Vl~~~~~~y~~~~~~~~l~g  129 (431)
T 3ht4_A           67 RDTLEKVYADVFGAEAGL------VRPQIISGTHAISTALFGILR-----------PGDELLYITGKPYDTLEEIVGVRG  129 (431)
T ss_dssp             HHHHHHHHHHHTTCSEEC------CBTTSCSHHHHHHHHHHTTCC-----------TTCEEEECSSSCCTTHHHHTTSSS
T ss_pred             HHHHHHHHHHHhCCCccc------ccceeeCHHHHHHHHHHHhCC-----------CCCEEEEeCCCCchhHHHHHhhcc
Confidence            566778899999987542      112245789999877765432           567788887 788888866543  


Q ss_pred             --------cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEec----CCccccccCChhHHHHHHHH-
Q 037144          195 --------VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATV----GTTAITAVDPLKPLCDVAKQ-  261 (502)
Q Consensus       195 --------~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~----gtt~~G~idpl~eI~~i~~~-  261 (502)
                              .|+   +++.+|.++  +|.+|+++|+++|+++      +.+|+++.    +++.+|.++|+++|+++|++ 
T Consensus       130 ~~~~~~~~~G~---~~~~v~~~~--~~~~d~e~l~~~l~~~------tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~  198 (431)
T 3ht4_A          130 KGVGSFKEYNI---GYNAVPLTE--GGLVDFEAVAAAIHSN------TKMIGIQRSKGYATRPSFTISQIKEMIAFVKEI  198 (431)
T ss_dssp             CSSSCSGGGTC---EEEECCBCT--TSSBCHHHHHHHCCTT------EEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHH
T ss_pred             cccchHHHcCC---EEEEeCCCC--CCCcCHHHHHhhcCCC------CeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhh
Confidence                    677   899999875  4799999999999654      34777776    78888889999999999999 


Q ss_pred             -hCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCC---CCcceEEEeeCchhhhhhhcC-CcccccCccC
Q 037144          262 -FGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFT---TLDCCCLWVKDPSCLLSTLST-NPQYLKNEAT  336 (502)
Q Consensus       262 -~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~---p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~  336 (502)
                       +|++++||++|+.+....... ..     ++|.++.++||++++   |.| |+++.+ +......... ....+..   
T Consensus       199 ~~~~~livDea~~~~~~~~~~~-~~-----g~Di~~~S~sK~lgg~~~~~G-G~v~~~-~~li~~l~~~~~~~~~g~---  267 (431)
T 3ht4_A          199 KPDVVVFVDNCYGEFIEEQEPC-HV-----GADLMAGSLIKNPGGGIVKTG-GYIVGK-EQYVEACAYRLTSPGIGA---  267 (431)
T ss_dssp             CTTCEEEEECTTCTTSSSCCGG-GT-----TCSEEEEETTSGGGTTTCSSC-EEEEEC-HHHHHHHHHHHSCTTTTT---
T ss_pred             CCCCEEEEeCCChhhccCCCcc-cc-----CCeEEEcCccccCCCCCCCce-EEEEec-HHHHHHHHHHhccCCccc---
Confidence             999999999998876432211 11     689999999999765   444 666654 4332221110 0001100   


Q ss_pred             CCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144          337 DQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA  402 (502)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~  402 (502)
                                      ..+-.+..  .|.+++  +.+.+..++++..++++++.+.|+++ ++++.
T Consensus       268 ----------------~~~~~~~~--~~~~~~--~l~~~~~~~~~~~~~a~~l~~~L~~~-g~~v~  312 (431)
T 3ht4_A          268 ----------------EAGASLYS--LQEMYQ--GFFLAPHVAGQALKGAIFTAAFLEKL-GMNTS  312 (431)
T ss_dssp             ----------------SCSCCCSC--SHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHH-TCCEE
T ss_pred             ----------------ccCccHHH--HHHHHh--HhhhHHHHHHHHHHHHHHHHHHHHhC-cCEec
Confidence                            00111111  122333  33455778889999999999999988 57764

>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}

Probab=99.73  E-value=1.1e-15  Score=158.32  Aligned_cols=318  Identities=10%  Similarity=0.053  Sum_probs=173.8

Q ss_pred             HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEE-eCCCCchhHHHHHH
Q 037144          115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVY-SSDQTHCAFQKAAQ  193 (502)
Q Consensus       115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~-~s~~~H~s~~~aa~  193 (502)
                      .+...++.++++++++.+..      ...+||+|||+||..|+..++...         ++..|+ .....|....-+..
T Consensus       106 ~~~~~~la~~l~~~~~~~~~------~~v~~~~sGseA~~~alk~a~~~~---------g~~~ii~~~~~yhg~~~~~~~  170 (453)
T 4ffc_A          106 YEQYVQVAELLNALTPGDHD------KRTALFNSGAEAVENAIKVARLAT---------GRPAVVAFDNAYHGRTNLTMA  170 (453)
T ss_dssp             CHHHHHHHHHHHHHSSCSSC------EEEEEESSHHHHHHHHHHHHHHHH---------CCCEEEEETTCCCCSSHHHHH
T ss_pred             CHHHHHHHHHHHHhCCCCCC------cEEEEeCcHHHHHHHHHHHHHHhc---------CCCEEEEEcCccCCcchHHHh
Confidence            45666788999999875321      158999999999999999887531         334444 44445544444444


Q ss_pred             HcCCC----------CCCEEEEecCCC--CCcccC-HHHHHHH---HHHHHhcCCccEEEEEecCCccccccCC----hh
Q 037144          194 IVGID----------RKNIRAIKTTKS--SSYGLS-AESVLSQ---INLDVEAELIPLFLCATVGTTAITAVDP----LK  253 (502)
Q Consensus       194 ~~Glg----------~~~v~~v~~~~~--~~~~~d-~~~Le~~---i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~  253 (502)
                      +.|-.          ...+..+|....  +.+.++ .+.++..   |++.. ....+.+|++....+..|.+-|    ++
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~i-~~~~~aavi~ep~~~~gG~~~~~~~~l~  249 (453)
T 4ffc_A          171 LTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIETQI-GAQSLAAIIIEPIQGEGGFIVPAPGFLA  249 (453)
T ss_dssp             HCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHHT-CGGGEEEEEECSSBTTTTSBCCCTTHHH
T ss_pred             hcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHHhc-CCCCEEEEEEcCCCCCCCcccCCHHHHH
Confidence            33321          114667776420  111223 2333322   22211 1122445666555555667755    99


Q ss_pred             HHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccC
Q 037144          254 PLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKN  333 (502)
Q Consensus       254 eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~  333 (502)
                      +|.++|++||++|++|.+|.++......+.....++ ..|.++++  |.++.+...|+++.++. .. +.+...   . .
T Consensus       250 ~l~~l~~~~~~llI~DEv~~g~g~~g~~~a~~~~~~-~pdi~t~s--K~~~~G~~~G~~~~~~~-i~-~~~~~~---~-~  320 (453)
T 4ffc_A          250 TLTAWASENGVVFIADEVQTGFARTGAWFASEHEGI-VPDIVTMA--KGIAGGMPLSAVTGRAE-LM-DAVYAG---G-L  320 (453)
T ss_dssp             HHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTC-CCSEEEEC--GGGGTTSSCEEEEEEHH-HH-TTSCTT---S-S
T ss_pred             HHHHHHHHcCCEEEEecCccCCCcccccchhhhcCC-CcchHhhh--hhhcCCcCeEEEEECHH-HH-hhhccc---C-c
Confidence            999999999999999999976533221111111122 45777654  99977778898877533 22 222110   0 0


Q ss_pred             ccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHh----cCCCeEEecCCCeeE
Q 037144          334 EATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVT----SDKRFEVAFPRNFSL  409 (502)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~----~~~~~~l~~~~~~~~  409 (502)
                      ..               +    -...++...+++..+..-.-.++.++..++.+++++.|+    +.|.+..+ +....+
T Consensus       321 ~~---------------t----~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~g~~  380 (453)
T 4ffc_A          321 GG---------------T----YGGNPVTCAAAVAALGVMRELDLPARARAIEASVTSRLSALAEEVDIIGEV-RGRGAM  380 (453)
T ss_dssp             CC---------------S----SSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCSSEEEE-EEETTE
T ss_pred             CC---------------C----CCcCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhCCCeEEE-EeeceE
Confidence            00               0    011334444444333211112344555555555555554    45655443 233345


Q ss_pred             EEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHH
Q 037144          410 VCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVR  489 (502)
Q Consensus       410 v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~  489 (502)
                      +.+.+..... .                 ..   ......++.+.+.++|.++.+...  ...++|+++. ...++++|+
T Consensus       381 ~~~~~~~~~~-~-----------------~~---~~~~~~~~~~~l~~~Gv~v~~~~~--~~~~iRi~~~-~~~t~e~i~  436 (453)
T 4ffc_A          381 LAIEIVKPGT-L-----------------EP---DAALTKSIAAEALSQGVLILTCGT--FGNVIRLLPP-LVIGDDLLD  436 (453)
T ss_dssp             EEEEEBCTTS-C-----------------CB---CHHHHHHHHHHHHHTTEECCEECT--TSCEEEECCC-TTCCHHHHH
T ss_pred             EEEEEecCcc-c-----------------CC---CHHHHHHHHHHHHhCCCEEecCCC--CCCEEEEECC-CCCCHHHHH
Confidence            5665532100 0                 00   023355777888888975444322  1358999874 446777999


Q ss_pred             HHHHHHHHHHHh
Q 037144          490 AAWTVVQEHLEA  501 (502)
Q Consensus       490 ~~~~~l~~~~~~  501 (502)
                      +++++|+++.++
T Consensus       437 ~~l~~l~~~l~~  448 (453)
T 4ffc_A          437 EGITALSDIIRA  448 (453)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999999988764

>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0

Probab=99.73  E-value=2.2e-16  Score=162.55  Aligned_cols=305  Identities=10%  Similarity=0.033  Sum_probs=170.5

Q ss_pred             HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCC-chhHHHHHHHc
Q 037144          117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQT-HCAFQKAAQIV  195 (502)
Q Consensus       117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~-H~s~~~aa~~~  195 (502)
                      ...++.+++++.++ +.+       ..+|++|||+|+..|+.+++...         ++..|++.+.+ |.....+....
T Consensus        96 ~~~~l~~~la~~~~-~~~-------~v~~~~sGsea~~~ai~~a~~~~---------~~~~vi~~~~~yhg~~~~~~~~~  158 (434)
T 3l44_A           96 LEVKFAKMLKEAMP-ALD-------KVRFVNSGTEAVMTTIRVARAYT---------GRTKIMKFAGCYHGHSDLVLVAA  158 (434)
T ss_dssp             HHHHHHHHHHHHCT-TCS-------EEEEESSHHHHHHHHHHHHHHHH---------CCCEEEEETTCCCCSSGGGGBC-
T ss_pred             HHHHHHHHHHHhCC-CCC-------EEEEeCchHHHHHHHHHHHHHhh---------CCCEEEEEcCccCCCcHHHHhhc
Confidence            34456677888876 222       58999999999999999887631         34455554444 43332222222


Q ss_pred             CCCC----------------CCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHH
Q 037144          196 GIDR----------------KNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPL  255 (502)
Q Consensus       196 Glg~----------------~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI  255 (502)
                      |.+.                ..+..+|.       -|+++|++++++...   .+.+|+++...+++|.+.|    +++|
T Consensus       159 g~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~~~---~~~~vi~ep~~~~~G~~~~~~~~l~~l  228 (434)
T 3l44_A          159 GSGPSTLGTPDSAGVPQSIAQEVITVPF-------NNVETLKEALDKWGH---EVAAILVEPIVGNFGIVEPKPGFLEKV  228 (434)
T ss_dssp             ------CCCBSSTTCCHHHHTTEEEECT-------TCHHHHHHHHHHHGG---GEEEEEECSSBCTTSCBCCCTTHHHHH
T ss_pred             CCcccccCCCCcCCCCCcCCCceEecCc-------ccHHHHHHHHHhCCC---CEEEEEEcCCCCCCCCccCCHHHHHHH
Confidence            2210                02233332       189999999975321   2356777777777888887    9999


Q ss_pred             HHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCc-ccccCc
Q 037144          256 CDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNP-QYLKNE  334 (502)
Q Consensus       256 ~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~-~yl~~~  334 (502)
                      .++|++||++||+|++|.++ ...........++ ..|.++++  |.++++...|+++.+ ++.. +.+.... .+... 
T Consensus       229 ~~l~~~~~illI~DEv~~g~-~~g~~~~~~~~~~-~~di~t~s--K~~~~G~~iG~~~~~-~~i~-~~~~~~~~~~~~~-  301 (434)
T 3l44_A          229 NELVHEAGALVIYDEVITAF-RFMYGGAQDLLGV-TPDLTALG--KVIGGGLPIGAYGGK-KEIM-EQVAPLGPAYQAG-  301 (434)
T ss_dssp             HHHHHTTTCEEEEECTTTTT-TSSSSCHHHHHTC-CCSEEEEE--GGGGTTSSCEEEEEC-HHHH-TTBTTTSSBCCCC-
T ss_pred             HHHHHHcCCEEEEeccccce-eccccHHHHHcCC-CCCeeehh--hhhcCCcCeeeEEEc-HHHH-HhhccCCCcccCC-
Confidence            99999999999999999876 3221111111122 46766654  998887889988664 3332 2221110 01100 


Q ss_pred             cCCCCCcccccCCCcccccCCCCCCchHHHH---HHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEecCCCe
Q 037144          335 ATDQEPKEQEVGYKDWQITLCRRFRSLKLWV---VIRNFGVANLRNFIRSHVGMAKLFERLVTS----DKRFEVAFPRNF  407 (502)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~---~l~~~g~~g~~~~~~~~~~la~~l~~~l~~----~~~~~l~~~~~~  407 (502)
                                          +-....+.+.+   +++.+..   ++++++..++.+++++.|++    .+.+..+ ++..
T Consensus       302 --------------------t~~~~~~a~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~g  357 (434)
T 3l44_A          302 --------------------TMAGNPASMASGIACLEVLQQ---EGLYEKLDELGATLEKGILEQAAKHNIDITL-NRLK  357 (434)
T ss_dssp             --------------------TTTTCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHHTTCCEEE-EEET
T ss_pred             --------------------CCCcCHHHHHHHHHHHHHHHc---ccHHHHHHHHHHHHHHHHHHHHHhCCCCEEE-Eeec
Confidence                                00113333333   3333322   34556666677777776655    3332222 2334


Q ss_pred             eEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHH
Q 037144          408 SLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESH  487 (502)
Q Consensus       408 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~d  487 (502)
                      +++.+.+..........               ..........++.+.+.++|.++ .+.   +...+|++.   ..++++
T Consensus       358 ~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~l~~~Gv~v-~~~---~~~~~rl~~---~~t~e~  415 (434)
T 3l44_A          358 GALTVYFTTNTIEDYDA---------------AQDTDGEMFGKFFKLMLQEGVNL-APS---KYEAWFLTT---EHTKED  415 (434)
T ss_dssp             TEEEEEESSSCCCSHHH---------------HHHSCHHHHHHHHHHHHHTTEEC-CSS---TTCCEECCT---TCCHHH
T ss_pred             cEEEEEEecCcccchhh---------------ccccCHHHHHHHHHHHHHCCeEE-eec---CCCcEEEec---ccCHHH
Confidence            56666653321100000               00000223456778888888643 322   224577753   467889


Q ss_pred             HHHHHHHHHHHHHh
Q 037144          488 VRAAWTVVQEHLEA  501 (502)
Q Consensus       488 i~~~~~~l~~~~~~  501 (502)
                      +++++++|+++.++
T Consensus       416 i~~~l~~l~~~l~~  429 (434)
T 3l44_A          416 IEYTIEAVGRAFAA  429 (434)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999988754

>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A

Probab=99.73  E-value=3.5e-16  Score=161.87  Aligned_cols=314  Identities=10%  Similarity=0.008  Sum_probs=177.3

Q ss_pred             HHHHHHHHHHHhcC-CCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHH---hCccCCCCeEEEeCCCC-chhHHHH
Q 037144          117 LENIVMDWLGQMLD-LPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKK---IGRENISKLVVYSSDQT-HCAFQKA  191 (502)
Q Consensus       117 le~~~~~~l~~l~g-~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~---~~~~~~~~~~v~~s~~~-H~s~~~a  191 (502)
                      ...++.+.++++++ .+.+       ..+|++|||+||..|+.+++.....+   .+..+.+++.|++.+.+ |....-+
T Consensus       102 ~~~~la~~la~~~~~~~~~-------~v~~~~~gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~  174 (449)
T 2cjg_A          102 AMARFVETFARVLGDPALP-------HLFFVEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYT  174 (449)
T ss_dssp             HHHHHHHHHHHHHCCTTCC-------EEEEESSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTG
T ss_pred             HHHHHHHHHHHhcCCCCCC-------EEEEeCchHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccch
Confidence            34456667777776 2222       68999999999999999887432211   01111125556665544 4322211


Q ss_pred             HHH--------cCCC--CCCEEEEecCC--CCC------cccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC--
Q 037144          192 AQI--------VGID--RKNIRAIKTTK--SSS------YGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP--  251 (502)
Q Consensus       192 a~~--------~Glg--~~~v~~v~~~~--~~~------~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp--  251 (502)
                      ...        .|.+  ...++.+|.+.  ...      ...++++|+++|++.   +..+.+|+++...+++|.+-+  
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~le~~i~~~---~~~~~~vi~ep~~~~~G~~~~~~  251 (449)
T 2cjg_A          175 LSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALRQARAAFETR---PHDIACFVAEPIQGEGGDRHFRP  251 (449)
T ss_dssp             GGTCCSCHHHHTTSCCCCCCEECCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHS---TTTEEEEEECSEETTTTCEECCH
T ss_pred             hhhcCCchhhcccCCCCCCCcEEEcCCCchhhccccchhhHHHHHHHHHHHHhc---CCceEEEEEeCcCCCCCCccCCH
Confidence            111        1221  12566777653  110      135677799888642   122456777766678898766  


Q ss_pred             --hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcc
Q 037144          252 --LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQ  329 (502)
Q Consensus       252 --l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~  329 (502)
                        +++|.++|++||+++++|++|.++......+.....++ ..|.++++  |++  |  .|++++++ +.. +.+.  +.
T Consensus       252 ~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~-~~di~t~s--K~l--~--iG~~~~~~-~~~-~~l~--~~  320 (449)
T 2cjg_A          252 EFFAAMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQLDV-APDIVAFG--KKT--Q--VCGVMAGR-RVD-EVAD--NV  320 (449)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSTHHHHTC-CCSEEEEC--GGG--S--SEEEEECG-GGG-GSTT--CT
T ss_pred             HHHHHHHHHHHHCCcEEEEeccccCCCccCcceeecccCC-CceEEEec--Ccc--c--EEEEEECH-HHh-hhhh--hc
Confidence              99999999999999999999986433211111111122 46777654  988  4  78887764 322 2110  00


Q ss_pred             cccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCC-eEEecC
Q 037144          330 YLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTS----DKR-FEVAFP  404 (502)
Q Consensus       330 yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~----~~~-~~l~~~  404 (502)
                      ++.....            ..++ ++......++.++++.+..   .++.++..++++++++.|++    .|. +..+ +
T Consensus       321 ~~~~~~~------------~~t~-~~n~~~~~aa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~-~  383 (449)
T 2cjg_A          321 FAVPSRL------------NSTW-GGNLTDMVRARRILEVIEA---EGLFERAVQHGKYLRARLDELAADFPAVVLDP-R  383 (449)
T ss_dssp             TTSTTSS------------CCSS-SSCHHHHHHHHHHHHHHHH---HTHHHHHHHHHHHHHHHHHHHHHHSTTTSEEE-E
T ss_pred             ccCCccc------------ccCC-CCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeE-e
Confidence            1100000            0000 1111112233334443322   34567778888888888875    454 5443 2


Q ss_pred             CCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCc
Q 037144          405 RNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTM  484 (502)
Q Consensus       405 ~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~  484 (502)
                      +..+++.|.+..                            .....++.++|.++|.++...    +..++|+++. ..++
T Consensus       384 ~~g~~~~~~~~~----------------------------~~~~~~~~~~l~~~Gv~v~~~----g~~~iRi~~~-~~~t  430 (449)
T 2cjg_A          384 GRGLMCAFSLPT----------------------------TADRDELIRQLWQRAVIVLPA----GADTVRFRPP-LTVS  430 (449)
T ss_dssp             EETTEEEEECSS----------------------------HHHHHHHHHHHHHTTEECEEE----TTTEEEECCC-TTCC
T ss_pred             eccEEEEEEECC----------------------------hHHHHHHHHHHHHCCeEEecC----CCCEEEEECC-CCCC
Confidence            344566665532                            111346777777778654332    3468999864 5567


Q ss_pred             HHHHHHHHHHHHHHHHh
Q 037144          485 ESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       485 ~~di~~~~~~l~~~~~~  501 (502)
                      +++|+++++.|+++.++
T Consensus       431 ~e~i~~~l~~l~~~l~~  447 (449)
T 2cjg_A          431 TAEIDAAIAAVRSALPV  447 (449)
T ss_dssp             HHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            88999999999988764

>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*

Probab=99.71  E-value=7.4e-16  Score=158.27  Aligned_cols=311  Identities=11%  Similarity=-0.012  Sum_probs=172.8

Q ss_pred             HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH
Q 037144          115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI  194 (502)
Q Consensus       115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~  194 (502)
                      .....++.+++++.++ +.+       ..++++||++|+..++..++...    +    ++.+|+.....|.....+...
T Consensus        91 ~~~~~~la~~l~~~~~-~~~-------~v~~~~ggsea~~~al~~a~~~~----~----~~~vi~~~~~yhg~~~~~~~~  154 (427)
T 3fq8_A           91 CALENVLAEMVNDAVP-SIE-------MVRFVNSGTEACMAVLRIMRAYT----G----RDKIIKFEGCYHGHADMFLVK  154 (427)
T ss_dssp             CHHHHHHHHHHHHHST-TCS-------EEEEESSHHHHHHHHHHHHHHHH----C----CCEEEEEETCCCCSCGGGCSS
T ss_pred             CHHHHHHHHHHHHhCC-CCC-------EEEEeCCHHHHHHHHHHHHHHhh----C----CCEEEEECCCcCCCCHHHHHh
Confidence            4566678889999987 322       58999999999999998877531    0    233444444445332221111


Q ss_pred             cCCC----------------CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhH
Q 037144          195 VGID----------------RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKP  254 (502)
Q Consensus       195 ~Glg----------------~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~e  254 (502)
                      .|.+                ...++.+|.+       |+++|++++++..   ..+.+|+++...+++|.+.|    +++
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------d~~~le~~l~~~~---~~~~~vi~~p~~~~~G~~~~~~~~l~~  224 (427)
T 3fq8_A          155 AGSGVATLGLPSSPGVPKKTTANTLTTPYN-------DLEAVKALFAENP---GEIAGVILEPIVGNSGFIVPDAGFLEG  224 (427)
T ss_dssp             CCTHHHHHTCCSCSSSCHHHHTTEEEEETT-------CHHHHHHHHHHST---TTEEEEEECSSBCTTSCBCCCTTHHHH
T ss_pred             cCCcccccCCCCCCCCCCcccCceeecCCC-------CHHHHHHHHHhCC---CCEEEEEEcCCcCCCCCcCCCHHHHHH
Confidence            1110                0024444431       8999999997631   23567888888888899988    999


Q ss_pred             HHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCc
Q 037144          255 LCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNE  334 (502)
Q Consensus       255 I~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~  334 (502)
                      |.++|++||+++++|++|+++ ...........++ ..|.++++  |+++.....|+++.+ +... +.+.....+... 
T Consensus       225 l~~l~~~~~~~li~DEv~~g~-~~g~~~~~~~~~~-~~di~t~s--K~~~~G~~~G~~~~~-~~~~-~~~~~~~~~~~~-  297 (427)
T 3fq8_A          225 LREITLEHDALLVFDEVITGF-RIAYGGVQEKFGV-TPDLTTLG--KIIGGGLPVGAYGGK-REIM-QLVAPAGPMYQA-  297 (427)
T ss_dssp             HHHHHHHTTCEEEEECTTTBT-TTBTTHHHHHTTC-CCSEEEEC--GGGGTTSSCEEEEEC-HHHH-TTBTTTSSBCCC-
T ss_pred             HHHHHHHcCCEEEEecccccc-ccCcchhhHhcCC-CCChhhhh--hhhhCCcceEEEEEc-HHHH-HhhccCCCcccc-
Confidence            999999999999999999865 3221111111122 45776665  999866668887664 3332 222211111110 


Q ss_pred             cCCCCCcccccCCCcccccCCCCCCchHHHHH---HHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEecCCCee
Q 037144          335 ATDQEPKEQEVGYKDWQITLCRRFRSLKLWVV---IRNFGVANLRNFIRSHVGMAKLFERLVTSDK---RFEVAFPRNFS  408 (502)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~---l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~---~~~l~~~~~~~  408 (502)
                                         .+-....+.+.++   ++.+..   +++.++..++.+++++.|+++.   ++....+....
T Consensus       298 -------------------~t~~~~~~~~aa~~aal~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~  355 (427)
T 3fq8_A          298 -------------------GTLSGNPLAMTAGIKTLELLRQ---PGTYEYLDQITKRLSDGLLAIAQETGHAACGGQVSG  355 (427)
T ss_dssp             -------------------CTTTTCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETT
T ss_pred             -------------------CCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeee
Confidence                               0001123333333   333322   3455666666677766665420   11111112234


Q ss_pred             EEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHH
Q 037144          409 LVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHV  488 (502)
Q Consensus       409 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di  488 (502)
                      ++.|.+.........          . .    .........++.+.+.++|.++.+..    .  .|+++. ...+++++
T Consensus       356 ~~~~~~~~~~~~~~~----------~-~----~~~~~~~~~~l~~~l~~~Gi~v~~~~----~--~r~~~~-~~~t~e~i  413 (427)
T 3fq8_A          356 MFGFFFTEGPVHNYE----------D-A----KKSDLQKFSRFHRGMLEQGIYLAPSQ----F--EAGFTS-LAHTEEDI  413 (427)
T ss_dssp             EEEEESSSCCCCSHH----------H-H----TTSCHHHHHHHHHHHHHTTEECCSST----T--SCEECC-TTCCHHHH
T ss_pred             EEEEEEecCcccccc----------c-c----ccccHHHHHHHHHHHHHCCcEEecCC----C--CCEEee-CcCCHHHH
Confidence            555655332110000          0 0    00002234567788888886443221    1  144443 44678899


Q ss_pred             HHHHHHHHHHHHhC
Q 037144          489 RAAWTVVQEHLEAF  502 (502)
Q Consensus       489 ~~~~~~l~~~~~~~  502 (502)
                      ++++++|+++.+++
T Consensus       414 ~~~l~~l~~~l~~~  427 (427)
T 3fq8_A          414 DATLAAARTVMSAL  427 (427)
T ss_dssp             HHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHhC
Confidence            99999999987753

>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}

Probab=99.71  E-value=2.3e-15  Score=155.81  Aligned_cols=327  Identities=12%  Similarity=0.027  Sum_probs=176.4

Q ss_pred             HHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCcc
Q 037144           92 IVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRE  171 (502)
Q Consensus        92 ~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~  171 (502)
                      .+.+.+...+.... .+   ....+++.++.+|++++++ ..+       ..++++||++|+..++.++|... +     
T Consensus        77 ~v~~a~~~~~~~~~-~~---~~~~~~~~~la~~l~~~~~-~~~-------~v~~~~gg~eA~~~al~~ar~~~-~-----  138 (453)
T 2cy8_A           77 RVNAAIAEALSHGV-QY---AASHPLEVRWAERIVAAFP-SIR-------KLRFTGSGTETTLLALRVARAFT-G-----  138 (453)
T ss_dssp             HHHHHHHHHHTTTC-SS---CSSCHHHHHHHHHHHHHCT-TCS-------EEEEESCHHHHHHHHHHHHHHHH-C-----
T ss_pred             HHHHHHHHHHHhCC-CC---CCCCHHHHHHHHHHHhhCC-CCC-------EEEEeCCHHHHHHHHHHHHHHhh-C-----
Confidence            34455555554321 12   1245788899999999986 322       58999999999999999876421 1     


Q ss_pred             CCCCeEEEeCCCCchhHHHHHHH----------cCCCC---CCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEE
Q 037144          172 NISKLVVYSSDQTHCAFQKAAQI----------VGIDR---KNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLC  238 (502)
Q Consensus       172 ~~~~~~v~~s~~~H~s~~~aa~~----------~Glg~---~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv  238 (502)
                        ++.+|+.....|.....+...          .|+..   ..+..+|.       .|+++|+++|++..   ..+.+|+
T Consensus       139 --~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------~d~~~le~~l~~~~---~~~~~vi  206 (453)
T 2cy8_A          139 --RRMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIRP-------DDIEGMREVFANHG---SDIAAFI  206 (453)
T ss_dssp             --CCEEEEECC----------------------------CGGGEEEECT-------TCHHHHHHHHHHHG---GGEEEEE
T ss_pred             --CCEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecCC-------CCHHHHHHHHHhcC---CCEEEEE
Confidence              334444443344222211111          13200   02333332       38999999997531   1244666


Q ss_pred             EecCCccccccCC----hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEe
Q 037144          239 ATVGTTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWV  314 (502)
Q Consensus       239 ~t~gtt~~G~idp----l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~  314 (502)
                      ++...+++|.+-|    +++|.++|++||++|++|++|+++ ...+.......++ ..|.++  ++|+++.+...|+++.
T Consensus       207 ~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~-~~di~s--~sK~l~~G~~~G~v~~  282 (453)
T 2cy8_A          207 AEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGF-RVGNHGMQALLDV-QPDLTC--LAKASAGGLPGGILGG  282 (453)
T ss_dssp             ECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTT-TTCTTHHHHHHTC-CCSEEE--EEGGGGTTSSCEEEEE
T ss_pred             ECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcccc-ccCchhhhHHhCC-CCcEEE--EChhhhCCcceEEEec
Confidence            6665567898877    999999999999999999999865 3221111101122 467665  4599987677899887


Q ss_pred             eCchhhhhhhcCC--c-ccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcH-HHHHHHHHHHHHHHHHHH
Q 037144          315 KDPSCLLSTLSTN--P-QYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGV-ANLRNFIRSHVGMAKLFE  390 (502)
Q Consensus       315 r~~~~l~~~~~~~--~-~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~-~g~~~~~~~~~~la~~l~  390 (502)
                      ++ +.. +.+...  . .+...                 +.    ....+.+.+++..+.. - .+++.++..+++++++
T Consensus       283 ~~-~~~-~~l~~~~~~~~~~~~-----------------t~----~~n~~~~aa~~aal~~~~-~~~~~~~~~~~~~~l~  338 (453)
T 2cy8_A          283 RE-DVM-GVLSRGSDRKVLHQG-----------------TF----TGNPITAAAAIAAIDTIL-EDDVCAKINDLGQFAR  338 (453)
T ss_dssp             CH-HHH-TTSSSCC--------------------------C----CCCHHHHHHHHHHHHHHH-HTTHHHHHHHHHHHHH
T ss_pred             hH-HHH-HHhccccCCCceeCC-----------------CC----CCCHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHH
Confidence            64 322 222110  0 00000                 00    1123333333332211 1 2345677778888888


Q ss_pred             HHHhcC----CCeEEecCCCeeEEEEEeec-----C-cchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCc
Q 037144          391 RLVTSD----KRFEVAFPRNFSLVCFRVTP-----S-AVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGK  460 (502)
Q Consensus       391 ~~l~~~----~~~~l~~~~~~~~v~f~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~  460 (502)
                      +.|+++    +....+ ++...++.+.+..     . ......     ..      ...+    .....++.+.+.++|.
T Consensus       339 ~~L~~~~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~-----~~------~~~~----~~~~~~l~~~l~~~Gv  402 (453)
T 2cy8_A          339 EAMNHLFARKGLNWLA-YGRFSGFHLMPGLPPNTTDTGSITRA-----EV------ARPD----VKMIAAMRMALILEGV  402 (453)
T ss_dssp             HHHHHHHHHTTCCEEE-ECCTTEEEEEETSCTTCCCCHHHHTT-----CS------CCCC----HHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHhhCCCcEEE-EEeeeEEEEEEecccccccccccccc-----cc------cccc----HHHHHHHHHHHHHCCe
Confidence            888653    322222 3445567776643     1 000000     00      0000    1223467777777786


Q ss_pred             EEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          461 VFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       461 ~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      ++ .+   .+.  +|++   ...++++|++++++|+++.++
T Consensus       403 ~v-~~---~~~--~~l~---~~~t~~~i~~~l~~l~~~l~~  434 (453)
T 2cy8_A          403 DI-GG---RGS--VFLS---AQHEREHVEHLVTTFDRVLDR  434 (453)
T ss_dssp             EC-BT---TTE--EECC---TTCCHHHHHHHHHHHHHHHHH
T ss_pred             EE-eC---CCC--EEee---ccCCHHHHHHHHHHHHHHHHH
Confidence            43 22   122  5543   446788999999999987653

>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}

Probab=99.71  E-value=2.9e-15  Score=153.93  Aligned_cols=308  Identities=9%  Similarity=0.029  Sum_probs=164.8

Q ss_pred             HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144          116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV  195 (502)
Q Consensus       116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~  195 (502)
                      +...++.++++++++ ..+       ..+|++|||+|+..|+..++...    +    ++.+|......|.....+....
T Consensus        93 ~~~~~la~~l~~~~~-~~~-------~v~~~~sGsea~~~al~~a~~~~----~----~~~ii~~~~~yhg~~~~~~~~~  156 (429)
T 4e77_A           93 EMEVKMAQLVTDLVP-TMD-------MVRMVNSGTEATMSAIRLARGYT----G----RDKIIKFEGCYHGHADCLLVKA  156 (429)
T ss_dssp             HHHHHHHHHHHHHST-TCS-------EEEEESSHHHHHHHHHHHHHHHH----C----CCEEEEETTCCCC---------
T ss_pred             HHHHHHHHHHHhhCC-CCC-------EEEEeCcHHHHHHHHHHHHHHhh----C----CCEEEEEcCccCCCChhhhhhc
Confidence            445566778888886 222       58999999999999999887531    0    2344444554554444332222


Q ss_pred             CCCCC----------------CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHH
Q 037144          196 GIDRK----------------NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPL  255 (502)
Q Consensus       196 Glg~~----------------~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI  255 (502)
                      |.|..                .+..+|.       .|+++|++++++..   ..+.+|+++...+..|.+.|    +++|
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~~---~~~~~vi~ep~~~~~g~~~~~~~~l~~l  226 (429)
T 4e77_A          157 GSGALTLGQPNSPGVPTDFAKHTLTCTY-------NDLASVRQAFEQYP---QEVACIIVEPVAGNMNCIPPLPEFLPGL  226 (429)
T ss_dssp             ---------CCCTTSCGGGGTTEEEECT-------TCHHHHHHHHHHST---TTEEEEEECSSBCTTSCBCCCTTHHHHH
T ss_pred             CCcccccCCCCcCCCCCccCCceeecCC-------CCHHHHHHHHHhcC---CCEEEEEECCccCCCCCcCCCHHHHHHH
Confidence            22110                1222221       28999999997521   12446666666666788877    9999


Q ss_pred             HHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCc-ccccCc
Q 037144          256 CDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNP-QYLKNE  334 (502)
Q Consensus       256 ~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~-~yl~~~  334 (502)
                      .++|++||++|++|++|+++ ...........++ ..|.++++  |.++.+...|+++.+ +... +.+.... .+... 
T Consensus       227 ~~l~~~~~~lli~DEv~~g~-r~g~~~~~~~~~~-~pdi~t~s--K~~~~G~~~G~~~~~-~~~~-~~l~~~~~~~~~~-  299 (429)
T 4e77_A          227 RALCDEFGALLIIDEVMTGF-RVALAGAQDYYHV-IPDLTCLG--KIIGGGMPVGAFGGR-REVM-NALAPTGPVYQAG-  299 (429)
T ss_dssp             HHHHHHHTCEEEEEETTTBT-TTBTTCHHHHTTC-CCSEEEEE--GGGGTTSCCEEEEEC-HHHH-TTBTTTSSBCC---
T ss_pred             HHHHHHcCCEEEEeccccCc-ccCcchHHHhcCC-CCCeeeec--ccccCCCCeEEEEEC-HHHH-HHhccCCCccccC-
Confidence            99999999999999999865 3221111111122 35776554  999877778877664 3332 2221110 01100 


Q ss_pred             cCCCCCcccccCCCcccccCCCCCCchHHH---HHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEecCCCe
Q 037144          335 ATDQEPKEQEVGYKDWQITLCRRFRSLKLW---VVIRNFGVANLRNFIRSHVGMAKLFERLVTS----DKRFEVAFPRNF  407 (502)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~~sr~~~al~~~---~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~----~~~~~l~~~~~~  407 (502)
                                          +-....+.+.   ++++.+..   +++.++..++.+++++.|++    .+..... +...
T Consensus       300 --------------------t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~g  355 (429)
T 4e77_A          300 --------------------TLSGNPIAMAAGFACLTEISQ---VGVYETLTELTDSLATGLRHAAKEENIPLVV-NHVG  355 (429)
T ss_dssp             --------------------CCCCCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHHTTCCCEE-EEET
T ss_pred             --------------------CCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCceEE-EEee
Confidence                                0011233333   33443322   34555666666666666654    3321111 2233


Q ss_pred             eEEEEEeecCc-chhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHH
Q 037144          408 SLVCFRVTPSA-VMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMES  486 (502)
Q Consensus       408 ~~v~f~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~  486 (502)
                      .++.+.+.... ...          ..    . ..........++.+.+.++|.++.+.    +...+|++   ...+++
T Consensus       356 ~~~~~~~~~~~~~~~----------~~----~-~~~~~~~~~~~~~~~l~~~Gi~v~~~----~~~~~~~~---~~~t~e  413 (429)
T 4e77_A          356 GMFGLFFTNADTVTC----------YQ----D-VMNCDVERFKRFFHLMLEEGVYLAPS----AFEAGFMS---LAHSNE  413 (429)
T ss_dssp             TEEEEECCSSSCCCS----------HH----H-HHTSCHHHHHHHHHHHHHTTEECCSS----TTSCEECC---TTCCHH
T ss_pred             eEEEEEEccCccccc----------cc----c-cccccHHHHHHHHHHHHHCCeEEeec----CCCCEEEe---ccCCHH
Confidence            45666554320 000          00    0 00000123457788888888643322    11234443   446788


Q ss_pred             HHHHHHHHHHHHHHhC
Q 037144          487 HVRAAWTVVQEHLEAF  502 (502)
Q Consensus       487 di~~~~~~l~~~~~~~  502 (502)
                      ++++++++|+++.+++
T Consensus       414 ~i~~~l~~l~~~l~~~  429 (429)
T 4e77_A          414 DIQKTVNAARRCFAKL  429 (429)
T ss_dssp             HHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHhC
Confidence            9999999999987653

>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0

Probab=99.71  E-value=1.4e-16  Score=162.30  Aligned_cols=325  Identities=9%  Similarity=0.024  Sum_probs=201.8

Q ss_pred             HHHHHHHHHHhhc-C-CCCcccccChhhHHHHHHHHHHHHHhcCCC--CccCcCCCCcEEEcCCchHHHHHHHHHHHHHH
Q 037144           89 VAGIVGEMLSSGF-N-VVGLDWISSPAAVELENIVMDWLGQMLDLP--KSFLFSGNGGGVIQGTTCEALLCTLTAARDRV  164 (502)
Q Consensus        89 ~~~~~~~~l~~~~-n-~~~~~~~~~p~~~~le~~~~~~l~~l~g~~--~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~  164 (502)
                      ++..+.+... .+ + .....|....+..++.+.+.+|+.+..+.+  ++.     -.+++|.||++|+..++.+..+. 
T Consensus        48 ~~~~v~~a~~-~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~-----i~i~~t~G~~~al~~~~~~l~~~-  120 (405)
T 3k7y_A           48 IFDSVLNADK-LVTENYKEKPYLLGNGTEDFSTLTQNLIFGNNSKYIEDKK-----ICTIQCIGGTGAIFVLLEFLKML-  120 (405)
T ss_dssp             CCHHHHHHHH-HHHHHCCCCCCCTTSSCHHHHHHHHHHHHCSSCTTTTTTC-----EEEEEEEHHHHHHHHHHHHHHTT-
T ss_pred             ccHHHHHHHH-HhcCCCCCCCCCCCCCcHHHHHHHHHHHcCCCCccccccc-----eEEEEcCchHHHHHHHHHHHHhc-
Confidence            4455656554 32 2 234567777788999999999997665543  110     03588999999887776654431 


Q ss_pred             HHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecC-C
Q 037144          165 LKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVG-T  243 (502)
Q Consensus       165 ~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~g-t  243 (502)
                              .+ +.|+++.+++..+..+++..|.   +++.+|+...+++.+|+++|++++++..+    ..+|+++.+ +
T Consensus       121 --------~~-d~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~~~----~~~i~l~~~~~  184 (405)
T 3k7y_A          121 --------NV-ETLYVTNPPYINHVNMIESRGF---NLKYINFFDYNLIDINYDLFLNDLRNIPN----GSSVILQISCY  184 (405)
T ss_dssp             --------TC-CEEEEESSCCHHHHHHHHTTTC---EEEEECCEETTTTEECHHHHHHHHHHSCS----SCEEEECCSSC
T ss_pred             --------CC-CEEEEeCCCCHhHHHHHHHcCC---eEEEEeccccccCCcCHHHHHHHHHhCCC----CeEEEEeCCCC
Confidence                    15 7899999999999999999999   99999983223579999999999975321    225666654 8


Q ss_pred             ccccccC---ChhHHHHHHHHhCCEEEeecccccccccC-c----cchhhhcCCCCCC-eeEEccCCcCC-CCCcceEEE
Q 037144          244 TAITAVD---PLKPLCDVAKQFGIWVHVDAAYAGSACIC-P----EFRHFIDGVECVD-SFSFNPHKWLF-TTLDCCCLW  313 (502)
Q Consensus       244 t~~G~id---pl~eI~~i~~~~g~~lhVDaA~g~~~~~~-~----~~~~~~~~~~~aD-si~~~~hK~l~-~p~~~g~~~  313 (502)
                      |+||.+-   .+++|+++|++||+|+++|.+|....... +    ..+. +... .-. .+..++.|.++ ....+|+++
T Consensus       185 NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~-~~~~-~~~~i~~~S~SK~~~l~GlRiG~~~  262 (405)
T 3k7y_A          185 NPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRK-FEEK-NIAFSVCQSFSKNMSLYGERAGALH  262 (405)
T ss_dssp             TTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHH-HHTT-TCCEEEEEECTTTSCCTTTTEEEEE
T ss_pred             CCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHH-HHhc-CCcEEEEeeCCccCCCccccceEEE
Confidence            9999984   57788899999999999999997765321 0    0111 1111 122 44567999997 567788875


Q ss_pred             e--eCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh-----c---HHHHHHHHHHHH
Q 037144          314 V--KDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF-----G---VANLRNFIRSHV  383 (502)
Q Consensus       314 ~--r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-----g---~~g~~~~~~~~~  383 (502)
                      +  .++.......... ..+....                  .+ ....+...++...+     +   .+.+.++.+++.
T Consensus       263 ~~~~~~~~~~~~~~~l-~~~~~~~------------------~~-~~~~~~q~~~~~~l~~~~l~~~~~~~l~~~~~~~~  322 (405)
T 3k7y_A          263 IVCKNQEEKKIVFNNL-CFIVRKF------------------YS-SPVIHTNRILCQLLNNQNLKLNWIKELSQLSQRIT  322 (405)
T ss_dssp             EECSSHHHHHHHHHHH-HHHHHTT------------------TS-SCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEeCCHHHHHHHHHHH-HHHHhcc------------------cC-CCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence            4  3443321111000 0000000                  00 00122222222222     1   123455667788


Q ss_pred             HHHHHHHHHHh----cCC---CeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH
Q 037144          384 GMAKLFERLVT----SDK---RFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN  456 (502)
Q Consensus       384 ~la~~l~~~l~----~~~---~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~  456 (502)
                      ++++++.+.|+    ++.   ++++. +|+.++++|.-.+.                                +++++|.
T Consensus       323 ~~R~~l~~~L~~~~~~~g~~~~~~~~-~p~gg~f~~~~l~~--------------------------------~~~~~L~  369 (405)
T 3k7y_A          323 NNRILFFNKLETYQKKYNLNYDWNVY-KKQRGLFSFVPLLA--------------------------------KIAEHLK  369 (405)
T ss_dssp             HHHHHHHHHHHHHGGGGTCCCCGGGG-SSCCSSEEECGGGG--------------------------------GGTTTTT
T ss_pred             HHHHHHHHHHHhhhhhcCCCCCCccc-cCCceEEEecCCCH--------------------------------HHHHHHH
Confidence            89999999998    762   14544 56677766632110                                1234453


Q ss_pred             hcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          457 VSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       457 ~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      +.| +++.+.   +    |+++++  .++++|++++++|.++.++
T Consensus       370 ~~g-V~v~p~---~----Ris~a~--~~~~~i~~~~~~i~~~~~~  404 (405)
T 3k7y_A          370 THH-IYIINN---G----RINVSG--ITKNNVDYIADKICLSLSQ  404 (405)
T ss_dssp             TTT-EECCTT---S----EEEGGG--CCTTHHHHHHHHHHHHHHC
T ss_pred             HCC-EeecCC---C----eEEEec--cCHHHHHHHHHHHHHHHhh
Confidence            345 444442   2    999864  3556899999999998765

>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*

Probab=99.70  E-value=2.3e-15  Score=156.57  Aligned_cols=315  Identities=11%  Similarity=0.028  Sum_probs=176.4

Q ss_pred             hHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHH-hC----------------ccCC-CC
Q 037144          114 AVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKK-IG----------------RENI-SK  175 (502)
Q Consensus       114 ~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~-~~----------------~~~~-~~  175 (502)
                      ..++++++.+.++++++...+       .++|++|||+||..|+.+++.....+ .+                ..|. ++
T Consensus       108 ~~~l~~~la~~l~~~~~~~~~-------~v~f~~sGseA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~  180 (472)
T 1ohv_A          108 PENFVEKLRESLLSVAPKGMS-------QLITMACGSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDY  180 (472)
T ss_dssp             BTTHHHHHHHTGGGGCCTTCC-------EEEEESSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCC
T ss_pred             HHHHHHHHHHHHHHhCCCCcC-------EEEEeCCchhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCC
Confidence            356777777777777643322       58999999999999999997543210 01                0111 13


Q ss_pred             eEEEeCCCCchhHHHHHHHcCC--------CCCCEEEEecCCC-CC------c-----ccCHHHHHHHHHHHHhcCCccE
Q 037144          176 LVVYSSDQTHCAFQKAAQIVGI--------DRKNIRAIKTTKS-SS------Y-----GLSAESVLSQINLDVEAELIPL  235 (502)
Q Consensus       176 ~~v~~s~~~H~s~~~aa~~~Gl--------g~~~v~~v~~~~~-~~------~-----~~d~~~Le~~i~~~~~~g~~p~  235 (502)
                      .+|......|.+..-+..+.|.        ....+..++.... ..      +     ..|+++|+++|++....+..+.
T Consensus       181 ~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~  260 (472)
T 1ohv_A          181 SILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVA  260 (472)
T ss_dssp             EEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCCCEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEE
T ss_pred             eEEEECCCcccccHHHHhcCCCccccccCCCCCCCcccCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEE
Confidence            3444444556555555444442        1111122333210 00      0     2378999999976422122355


Q ss_pred             EEEEecCCccccccCC----hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCC-CCCeeEEccCCcC-CCCCcc
Q 037144          236 FLCATVGTTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE-CVDSFSFNPHKWL-FTTLDC  309 (502)
Q Consensus       236 ~Vv~t~gtt~~G~idp----l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~-~aDsi~~~~hK~l-~~p~~~  309 (502)
                      +|++....+++|.+-|    +++|.++|++||++||+|++|.++......+.....++. ..|.++++  |++ +    .
T Consensus       261 ~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~gv~~~~Di~t~s--K~~l~----G  334 (472)
T 1ohv_A          261 GIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQTGGGSTGKFWAHEHWGLDDPADVMTFS--KKMMT----G  334 (472)
T ss_dssp             EEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGCCSSCCSEEEEC--GGGSS----E
T ss_pred             EEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEeCcccCCCCCCCchhccccCCCCCCCEEEEc--ccccc----C
Confidence            7777777778998877    999999999999999999999763221110011011221 37887766  984 3    2


Q ss_pred             eEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHH
Q 037144          310 CCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLF  389 (502)
Q Consensus       310 g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l  389 (502)
                      |++ + ++. +.   ...+.+...                 ++ ++......++.++++.+..   .++.++..+++++|
T Consensus       335 G~~-~-~~~-~~---~~~~~~~~~-----------------T~-~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l  387 (472)
T 1ohv_A          335 GFF-H-KEE-FR---PNAPYRIFN-----------------TW-LGDPSKNLLLAEVINIIKR---EDLLSNAAHAGKVL  387 (472)
T ss_dssp             EEE-E-CGG-GS---CSSSSSSCC-----------------SS-SSCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHH
T ss_pred             Ccc-C-chh-hc---ccccccccC-----------------cc-CccHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHH
Confidence            444 3 222 11   001000000                 00 1111122233344444322   24567778888888


Q ss_pred             HHHHhcC----CC-eEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEE
Q 037144          390 ERLVTSD----KR-FEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMT  464 (502)
Q Consensus       390 ~~~l~~~----~~-~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~  464 (502)
                      ++.|+++    |+ +.-+ .+...++.|.+..                            ......+.++|.++|..+..
T Consensus       388 ~~~L~~l~~~~~~~v~~~-~~~g~~~~~~~~~----------------------------~~~~~~~~~~l~~~Gv~~~~  438 (472)
T 1ohv_A          388 LTGLLDLQARYPQFISRV-RGRGTFCSFDTPD----------------------------ESIRNKLISIARNKGVMLGG  438 (472)
T ss_dssp             HHHHHHHHHHCTTTCEEE-EEETTEEEEECSS----------------------------HHHHHHHHHHHHHTTEECEE
T ss_pred             HHHHHHHHhhCCCcEEee-cCCceEEEEEeCC----------------------------hhHHHHHHHHHHHCCeEEec
Confidence            8888654    43 3322 2233455554321                            11235677777778865433


Q ss_pred             eeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHhC
Q 037144          465 HAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEAF  502 (502)
Q Consensus       465 ~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~~  502 (502)
                      .    +..+||+++. ..++++||+++++.|.++.+++
T Consensus       439 ~----g~~~iRi~~~-~~~t~e~i~~~~~~l~~~l~~~  471 (472)
T 1ohv_A          439 C----GDKSIRFRPT-LVFRDHHAHLFLNIFSDILADF  471 (472)
T ss_dssp             E----TTTEEEECCC-TTCCHHHHHHHHHHHHHHHHTC
T ss_pred             C----CCCEEEEECC-CCCCHHHHHHHHHHHHHHHHhc
Confidence            2    3458999875 5577889999999999987653

>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*

Probab=99.69  E-value=1.8e-15  Score=155.79  Aligned_cols=309  Identities=11%  Similarity=0.036  Sum_probs=172.2

Q ss_pred             HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH
Q 037144          115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI  194 (502)
Q Consensus       115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~  194 (502)
                      .+...++.++++++++ ..+       ..+|++|||+|+..++.++|... +       ++.+|+.....|.....+...
T Consensus        95 ~~~~~~l~~~la~~~~-~~~-------~v~~~~sgseA~~~al~~ar~~~-~-------~~~vi~~~~~yhg~~~~~~~~  158 (434)
T 2epj_A           95 GEAEVLLAEKILGYVK-RGG-------MIRFVNSGTEATMTAIRLARGYT-G-------RDLILKFDGCYHGSHDAVLVA  158 (434)
T ss_dssp             CHHHHHHHHHHHHHHC-TTC-------EEEEESSHHHHHHHHHHHHHHHH-C-------CCEEEEEETCCCCSSGGGSEE
T ss_pred             CHHHHHHHHHHHHhCC-CCC-------EEEEeCCHHHHHHHHHHHHHHhh-C-------CCeEEEEcCCcCCCCHHHHHh
Confidence            3455667788888874 222       58999999999999999876421 1       334444443444322211111


Q ss_pred             -------------cCCC---CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhH
Q 037144          195 -------------VGID---RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKP  254 (502)
Q Consensus       195 -------------~Glg---~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~e  254 (502)
                                   .|+.   ...++.+|.       .|+++|+++|++..   ..+.+|+++...+++|.+.|    +++
T Consensus       159 ~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~~l~~~~---~~~~~vi~ep~~~~~G~~~~~~~~l~~  228 (434)
T 2epj_A          159 AGSAAAHYGVPTSAGVPEAVARLTLVTPY-------NDVEALERVFAEYG---DRIAGVIVEPVIANAGVIPPRREFLAA  228 (434)
T ss_dssp             CC------CEESSTTCCHHHHTTEEEEET-------TCHHHHHHHHHHHG---GGEEEEEECSSBCSSSCBCCCHHHHHH
T ss_pred             cCCCccccCCCCCCCCCCcccCceEecCC-------CCHHHHHHHHHhCC---CCEEEEEEeCCcCCCCccCCCHHHHHH
Confidence                         1220   013555653       28999999997531   12456777666667899888    999


Q ss_pred             HHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcc-cccC
Q 037144          255 LCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQ-YLKN  333 (502)
Q Consensus       255 I~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~-yl~~  333 (502)
                      |.++|++||++|++|++|+++ ...+.......++ ..|.+++  +|+++.+...|+++.++ +.. +.+..... +...
T Consensus       229 l~~l~~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~-~~di~s~--sK~l~~G~~~G~v~~~~-~~~-~~l~~~~~~~~~~  302 (434)
T 2epj_A          229 LQRLSRESGALLILDEVVTGF-RLGLEGAQGYFNI-EGDIIVL--GKIIGGGFPVGAVAGSR-EVM-SLLTPQGKVFNAG  302 (434)
T ss_dssp             HHHHHHHHTCEEEEEETTTTT-TSSTTHHHHHHTC-CCSEEEE--EGGGGTTSSCEEEEECH-HHH-TTBTTTSSBCCCC
T ss_pred             HHHHHHHcCCEEEEEcchhce-eCCcchhhHHhCC-CCCeeee--cchhcCCcceeeeeecH-HHH-HhhccCCCcccCC
Confidence            999999999999999999865 3222111111122 4676655  59998766788888764 322 22221000 1000


Q ss_pred             ccCCCCCcccccCCCcccccCCCCCCchHH---HHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEecCCCe
Q 037144          334 EATDQEPKEQEVGYKDWQITLCRRFRSLKL---WVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK---RFEVAFPRNF  407 (502)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~~sr~~~al~~---~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~---~~~l~~~~~~  407 (502)
                                       ++    ....+.+   ..+++.+..   +++.++..++++++++.|+++.   ++....++..
T Consensus       303 -----------------t~----~~~~~~~aa~~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g  358 (434)
T 2epj_A          303 -----------------TF----NAHPITMAAGLATLKALEE---EPVYSVSREAAKALEEAASEVLDRTGLPYTINRVE  358 (434)
T ss_dssp             -----------------TT----TTCHHHHHHHHHHHHHHHH---SCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEET
T ss_pred             -----------------CC----CcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEee
Confidence                             00    1122333   333443322   3466777788888888887641   2321112334


Q ss_pred             eEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHH
Q 037144          408 SLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESH  487 (502)
Q Consensus       408 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~d  487 (502)
                      +++.+.+..........               ..........++.+.|.++|.+ +.+..   ...+|++   ...++++
T Consensus       359 ~~~~i~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~l~~~Gv~-v~~~~---~~~~~~~---~~~t~e~  416 (434)
T 2epj_A          359 SMMQLFIGVEEVSNAAQ---------------ARKADKKFYVKLHEEMLRRGVF-IAPSN---LEAVFTG---LPHQGEA  416 (434)
T ss_dssp             TEEEEEETCSCCSSHHH---------------HTTSCHHHHHHHHHHHHHTTEE-CCSST---TSCEECC---TTCSHHH
T ss_pred             eEEEEEEeCCCcccchh---------------ccccCHHHHHHHHHHHHHCCeE-EeccC---CCcEEEe---ccCCHHH
Confidence            56666664310000000               0000012245677778778864 33321   1234543   3467889


Q ss_pred             HHHHHHHHHHHHHh
Q 037144          488 VRAAWTVVQEHLEA  501 (502)
Q Consensus       488 i~~~~~~l~~~~~~  501 (502)
                      ++++++.|+++.++
T Consensus       417 i~~~l~~l~~~l~~  430 (434)
T 2epj_A          417 LEIAVEGLRSSLKT  430 (434)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999987654

>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*

Probab=99.68  E-value=2.5e-15  Score=152.60  Aligned_cols=291  Identities=10%  Similarity=-0.018  Sum_probs=182.6

Q ss_pred             cccccChhh-----HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCe----
Q 037144          106 LDWISSPAA-----VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKL----  176 (502)
Q Consensus       106 ~~~~~~p~~-----~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~----  176 (502)
                      ..|....+.     .++++.+.+|+. ..|.+...    ....++|+|+++++..++.+..+           +++    
T Consensus        57 ~~Y~~~~G~~~~~~~~lr~aia~~~~-~~g~~~~~----~~~i~~t~G~~~al~~~~~~l~~-----------~Gd~~~~  120 (391)
T 3bwn_A           57 SYFSDMTNLCWFLEPELEDAIKDLHG-VVGNAATE----DRYIVVGTGSTQLCQAAVHALSS-----------LARSQPV  120 (391)
T ss_dssp             SSCSCTTSSSTTSCHHHHHHHHHHHH-HHCSBCCS----SSEEEEEEHHHHHHHHHHHHHHH-----------TSSSSSE
T ss_pred             hcCCCCCCcccccCHHHHHHHHHHHH-hcCCCCCC----CCeEEEeCChHHHHHHHHHHhcC-----------CCCCCcc
Confidence            456655565     889999988887 45653210    01589999999998877766544           566    


Q ss_pred             EEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHH
Q 037144          177 VVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLC  256 (502)
Q Consensus       177 ~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~  256 (502)
                      .|+++.+.|.++..+++..|.   +++.+++|.+   .++        .      ..+.+|+++.++|+||.+-+  +|+
T Consensus       121 ~Vlv~~P~y~~~~~~~~~~g~---~~~~~~~d~~---~l~--------~------~~~k~v~l~~p~NPtG~~~~--~l~  178 (391)
T 3bwn_A          121 SVVAAAPFYSTYVEETTYVRS---GMYKWEGDAW---GFD--------K------KGPYIELVTSPNNPDGTIRE--TVV  178 (391)
T ss_dssp             EEEECSSCCTHHHHHHHTTCB---TTEEEEEEST---TCC--------C------CSCEEEEEESSCTTTCCCCC--CCC
T ss_pred             eEEEcCCCchhHHHHHHHcCC---eEEEecCCHH---HcC--------C------CCCEEEEECCCCCCCchhHH--HHH
Confidence            899999999999999999999   9999998753   222        0      12457778999999999975  554


Q ss_pred             HHHHHhC--CEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCcccccC
Q 037144          257 DVAKQFG--IWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQYLKN  333 (502)
Q Consensus       257 ~i~~~~g--~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~  333 (502)
                      +  ++++  +++++|.+|+...     .. .+......+.+..++||.++.| ..+|++++.++.... .+.....+...
T Consensus       179 ~--~~~~~~~~ii~De~y~~~~-----~~-~l~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~l~~-~l~~~~~~~~~  249 (391)
T 3bwn_A          179 N--RPDDDEAKVIHDFAYYWPH-----YT-PITRRQDHDIMLFTFSKITGHAGSRIGWALVKDKEVAK-KMVEYIIVNSI  249 (391)
T ss_dssp             -------CCCEEEEECTTCSTT-----TS-CCCCCBCCSEEEEEHHHHHSCGGGCEEEEEECCHHHHH-HHHHHHHHHHS
T ss_pred             H--HhhcCCCEEEEeCCCCCCC-----CC-ccccCCCCeEEEEechhhcCCCccceEEEEecCHHHHH-HHHHHhccccc
Confidence            4  2255  9999999996311     11 1111235678888999998744 446888775554332 22111111100


Q ss_pred             ccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--c----------HHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 037144          334 EATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--G----------VANLRNFIRSHVGMAKLFERLVTSDKRFEV  401 (502)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g----------~~g~~~~~~~~~~la~~l~~~l~~~~~~~l  401 (502)
                                             ....+..+++...+  +          .+.++++.+++.++++++.+.|+++|++++
T Consensus       250 -----------------------~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~  306 (391)
T 3bwn_A          250 -----------------------GVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVVKESDAFTL  306 (391)
T ss_dssp             -----------------------SCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTCSSEEC
T ss_pred             -----------------------CCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCccc
Confidence                                   00222223332222  2          345778888899999999999999888877


Q ss_pred             ecCCCe------------e-EEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeE
Q 037144          402 AFPRNF------------S-LVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIV  468 (502)
Q Consensus       402 ~~~~~~------------~-~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~  468 (502)
                      ..+...            + .+++.+...                               ..+.+.+.+.|..+.++..+
T Consensus       307 ~~p~~~~~~f~~~~~~~~g~~~~~~~~~~-------------------------------~~~~~~l~~~gV~v~pg~~f  355 (391)
T 3bwn_A          307 PKYPEAFCNYFGKSLESYPAFAWLGTKEE-------------------------------TDLVSELRRHKVMSRAGERC  355 (391)
T ss_dssp             CCCCCEEETTTTEEECCCCSEEEEEESSS-------------------------------CCHHHHHHHTTEECEEGGGG
T ss_pred             ccCCccccccccccCCCcceEEEecCCcH-------------------------------HHHHHHHHHCCEEEccCCCC
Confidence            532211            1 233443211                               12334455567655544433


Q ss_pred             C-CEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144          469 G-GIYVLRFAAGNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       469 ~-g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~  500 (502)
                      . +..++|++++   ++++++++++++|+++.+
T Consensus       356 g~~~~~iRis~~---~~~e~i~~~~~~L~~~~~  385 (391)
T 3bwn_A          356 GSDKKHVRVSML---SREDVFNVFLERLANMKL  385 (391)
T ss_dssp             TCCTTEEEEESC---SCHHHHHHHHHHHHSCC-
T ss_pred             CCCCCEEEEEec---CCHHHHHHHHHHHHHHHH
Confidence            3 2568999987   367799999999987654

>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*

Probab=99.67  E-value=8.6e-16  Score=162.41  Aligned_cols=189  Identities=8%  Similarity=0.029  Sum_probs=127.8

Q ss_pred             ccccChhhHHHHHH-HHHHHHHhcCC---C-CccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeC
Q 037144          107 DWISSPAAVELENI-VMDWLGQMLDL---P-KSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSS  181 (502)
Q Consensus       107 ~~~~~p~~~~le~~-~~~~l~~l~g~---~-~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s  181 (502)
                      .|....+...+.++ +..|+.+.++.   + ..      ...++|+|+++++..++.+...+.+      ..+++.|+++
T Consensus       133 ~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~------~~I~~t~G~~eal~~~~~~l~~~~l------~~~Gd~Vlv~  200 (546)
T 2zy4_A          133 NYPVPPRMLNISEKIVRQYIIREMGADAIPSES------VNLFAVEGGTAAMAYIFESLKLNGL------LKAGDKVAIG  200 (546)
T ss_dssp             SCCSSSSCCHHHHHHHHHHHHHHTTCTTSCGGG------EEEEEEEHHHHHHHHHHHHHHHTTS------SCTTCEEEEE
T ss_pred             CCCCCcCCHHHHHHHHHHHHHHhccCCCCCCCc------ceEEEECCHHHHHHHHHHHhhhhhc------CCCCCEEEEe
Confidence            45544444445544 55566776543   1 11      2689999999998776655321100      0156788888


Q ss_pred             CCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hhHHHHH
Q 037144          182 DQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LKPLCDV  258 (502)
Q Consensus       182 ~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~eI~~i  258 (502)
                      .++|..+..++.+.+.|. +++.+|+++++++.+|+++|++++...      +.+|+++.++|+||.+-+   +++|+++
T Consensus       201 ~P~y~~~~~~~~~~~~g~-~~~~v~~~~~~~~~~d~~~l~~~~~~~------~k~v~l~~p~NPtG~~~~~~~l~~l~~~  273 (546)
T 2zy4_A          201 MPVFTPYIEIPELAQYAL-EEVAINADPSLNWQYPDSELDKLKDPA------IKIFFCVNPSNPPSVKMDQRSLERVRNI  273 (546)
T ss_dssp             ESCCHHHHHHHHSTTSCC-EEEEEECBGGGTTBCCHHHHGGGGSTT------EEEEEEESSCSSSCBCCCHHHHHHHHHH
T ss_pred             CCCCccHHHHHHHcCCCc-EEEEEecCcccCCCCCHHHHHHhhCCC------CeEEEEECCCCCCCccCCHHHHHHHHHH
Confidence            899999988877654322 788899876556789999998876332      447777899999999966   6667888


Q ss_pred             H--HHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCc
Q 037144          259 A--KQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDP  317 (502)
Q Consensus       259 ~--~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~  317 (502)
                      |  +++|+++++|.+|+.+..........   ....+.+..+++|+++.| ..+|+++..+.
T Consensus       274 a~~~~~~~~ii~De~y~~~~~~~~s~~~~---~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~  332 (546)
T 2zy4_A          274 VAEHRPDLMILTDDVYGTFADDFQSLFAI---CPENTLLVYSFSKYFGATGWRLGVVAAHQQ  332 (546)
T ss_dssp             HHHTCTTCEEEEECTTGGGSTTCCCHHHH---CGGGEEEEEESTTTTTCGGGCEEEEEEESS
T ss_pred             HHhccCCcEEEEeCcchhhcccCcCHHHh---CCCCEEEEEeCccccCCCCcceEEEEECCH
Confidence            8  77999999999998765321111111   113457788899999744 56898888765

>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}

Probab=99.62  E-value=2.6e-14  Score=146.58  Aligned_cols=306  Identities=12%  Similarity=0.058  Sum_probs=169.3

Q ss_pred             HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH
Q 037144          115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI  194 (502)
Q Consensus       115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~  194 (502)
                      .+++.++.++++++++ ..+       ..++++||++|+..++.+||... +       ++.+|+.+...|.....+...
T Consensus        91 ~~~~~~l~~~l~~~~~-~~~-------~v~~~~~g~ea~~~al~~ar~~~-~-------~~~vi~~~~~yhg~~~~~~~~  154 (424)
T 2e7u_A           91 SPLEVALAKKVKRAYP-FVD-------LVRFVNSGTEATMSALRLARGYT-G-------RPYIVKFRGNYHGHADGLLVE  154 (424)
T ss_dssp             CHHHHHHHHHHHHHCT-TCC-------EEEEESSHHHHHHHHHHHHHHHH-C-------CCEEEEETTCCCCCCGGGSEE
T ss_pred             CHHHHHHHHHHHHhCC-CCC-------EEEEeCCHHHHHHHHHHHHHHhh-C-------CCEEEEECCCcCCCcHHHHHh
Confidence            4456677788888875 222       58999999999999999876431 1       344555544445322222111


Q ss_pred             c-------------CCC---CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhH
Q 037144          195 V-------------GID---RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKP  254 (502)
Q Consensus       195 ~-------------Glg---~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~e  254 (502)
                      .             |+.   ...++.+|.       .|+++|++++++..   ..+.+|+++...+++|.+-|    +++
T Consensus       155 ~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~~l~~~~---~~~~~vi~ep~~~~~G~~~~~~~~l~~  224 (424)
T 2e7u_A          155 AGSGALTLGVPSSAGVPEEYAKLTLVLEY-------NDPEGLREVLKRRG---EEIAAIIFEPVVGNAGVLVPTEDFLKA  224 (424)
T ss_dssp             CCSSSCCBCEESSTTCCHHHHTTEEEECT-------TCHHHHHHHHHHHG---GGEEEEEECSSBCTTSCBCCCHHHHHH
T ss_pred             cCCcccccCCCCCCCCCCccCCceEeCCC-------CCHHHHHHHHHhCC---CCEEEEEEeCCCCCCCCcCCCHHHHHH
Confidence            1             210   013455543       38999999997531   12446666655555898877    999


Q ss_pred             HHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcC-CcccccC
Q 037144          255 LCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLST-NPQYLKN  333 (502)
Q Consensus       255 I~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~-~~~yl~~  333 (502)
                      |.++ ++||+++++|.+|+++ ...........++ ..|.+  +++|+++.+...|+++.++ +.. +.+.. ...+...
T Consensus       225 l~~l-~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~-~~di~--s~sK~l~~G~~~G~~~~~~-~~~-~~~~~~~~~~~~~  297 (424)
T 2e7u_A          225 LHEA-KAYGVLLIADEVMTGF-RLAFGGATELLGL-KPDLV--TLGKILGGGLPAAAYAGRR-EIM-EKVAPLGPVYQAG  297 (424)
T ss_dssp             HHHG-GGGTCEEEEECTTTTT-TSSTTHHHHHHTC-CCSEE--EECGGGGTTSSCEEEEECH-HHH-TTBTTTSSBCCCC
T ss_pred             HHHH-HHcCCEEEEecCcccc-ccchhHHHHHhCC-Ccchh--hhhhhhhCCcceEEEEEcH-HHH-hhhcccCCcccCC
Confidence            9999 9999999999999865 3221111111122 46765  5579998767788888764 322 22221 1001100


Q ss_pred             ccCCCCCcccccCCCcccccCCCCCCchHHH---HHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCeEEecCCCe
Q 037144          334 EATDQEPKEQEVGYKDWQITLCRRFRSLKLW---VVIRNFGVANLRNFIRSHVGMAKLFERLVTSD---KRFEVAFPRNF  407 (502)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~---~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~---~~~~l~~~~~~  407 (502)
                                       ++    ....+.+.   ++++.+..  .+++.++..++++++++.|+++   .++....++..
T Consensus       298 -----------------t~----~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g  354 (424)
T 2e7u_A          298 -----------------TL----SGNPLAMAAGLATLELLEE--NPGYYAYLEDLGARLEAGLKEVLKEKGLPHTVNRVG  354 (424)
T ss_dssp             -----------------TT----CSCHHHHHHHHHHHHHHHH--CTHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEET
T ss_pred             -----------------CC----CCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeec
Confidence                             00    11233333   33333212  2456777888888888888764   12321112334


Q ss_pred             eEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHH
Q 037144          408 SLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESH  487 (502)
Q Consensus       408 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~d  487 (502)
                      +++.+.+.........               ...........++.+.+.++|.++ .+..   ...+|++   ...++++
T Consensus       355 ~~~~i~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~l~~~Gv~v-~~~~---~~~~~~~---~~~t~~~  412 (424)
T 2e7u_A          355 SMITVFFTEGPVVTFQ---------------DARRTDTELFKRFFHGLLDRGIYW-PPSN---FEAAFLS---VAHREED  412 (424)
T ss_dssp             TEEEEESSSSCCCSHH---------------HHTTSCHHHHHHHHHHHHTTTEEC-CSSS---SSCEECC---TTCCHHH
T ss_pred             eEEEEEEeCCCCcchh---------------hhcccCHHHHHHHHHHHHHCCeEE-eccC---CCceEee---ccCCHHH
Confidence            4666665431100000               000000122456778888878643 3321   1224544   3467789


Q ss_pred             HHHHHHHHHHH
Q 037144          488 VRAAWTVVQEH  498 (502)
Q Consensus       488 i~~~~~~l~~~  498 (502)
                      +++++++|+++
T Consensus       413 i~~~l~~l~~~  423 (424)
T 2e7u_A          413 VEKTLEALRKA  423 (424)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHh
Confidence            99999999875

>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*

Probab=99.60  E-value=5.2e-15  Score=151.98  Aligned_cols=307  Identities=9%  Similarity=-0.063  Sum_probs=190.4

Q ss_pred             HHHHHHHHHHhhc-CCC--CcccccCh-h---hHHHHHHHHHHHHHhcCC--CCccCcCCCCcEEEcCCchHHHHHHHHH
Q 037144           89 VAGIVGEMLSSGF-NVV--GLDWISSP-A---AVELENIVMDWLGQMLDL--PKSFLFSGNGGGVIQGTTCEALLCTLTA  159 (502)
Q Consensus        89 ~~~~~~~~l~~~~-n~~--~~~~~~~p-~---~~~le~~~~~~l~~l~g~--~~~~~~~~~~~g~~t~ggt~a~~~al~~  159 (502)
                      +|..+.+.+...+ ...  ...|.... +   ..++++.+.+|+.+..+.  +.+       ..++|+|+++++..++.+
T Consensus        70 ~~~~v~~a~~~~l~~~~~~~~~Y~~~~~G~~~~~~lr~aia~~~~~~~~~~~~~~-------~iv~t~G~~~al~~~~~~  142 (427)
T 2hox_A           70 EEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDR-------YIVFGVGVTQLIHGLVIS  142 (427)
T ss_dssp             HHHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTC-------EEEEESHHHHHHHHHHHH
T ss_pred             CCHHHHHhHHhhhhcCCcccccCCCCCCCccchHHHHHHHHHHHHHhCCcCCCCC-------EEEEeCCHHHHHHHHHHH
Confidence            3444555555544 222  22355444 5   688999999999876553  222       589999999998777665


Q ss_pred             H--------HHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcC
Q 037144          160 A--------RDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAE  231 (502)
Q Consensus       160 a--------~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g  231 (502)
                      .        .+           +++.|+++.+.|..+...++..|.   +++.        +.+|+++|++++++.    
T Consensus       143 l~~~~~~~~~~-----------~Gd~Vlv~~P~y~~~~~~~~~~g~---~~~~--------~~~d~~~l~~~~~~~----  196 (427)
T 2hox_A          143 LSPNMTATPDA-----------PESKVVAHAPFYPVFREQTKYFDK---KGYV--------WAGNAANYVNVSNPE----  196 (427)
T ss_dssp             HSCCTTTCTTS-----------CCEEEEECSSCCHHHHHHHHHSCB---TTEE--------EEEEGGGGTTCSCGG----
T ss_pred             HhhccccccCC-----------CCCEEEEeCCCcccHHHHHHHcCC---eeee--------ecCCHHHHHHhhcCC----
Confidence            5        22           678999999999999999999998   7653        356778888877543    


Q ss_pred             CccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-Ccce
Q 037144          232 LIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCC  310 (502)
Q Consensus       232 ~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g  310 (502)
                        +.+|+++.++|+||.+-+ +.    ++  +++.+.|.++....   ..... +.  ...+.+..+++|.++.| ..+|
T Consensus       197 --~k~v~l~~p~NPtG~~~~-~~----l~--~~~~i~d~~~~~~~---~s~~~-~~--~~~~i~~~S~SK~~g~~G~RiG  261 (427)
T 2hox_A          197 --QYIEMVTSPNNPEGLLRH-AV----IK--GCKSIYDMVYYWPH---YTPIK-YK--ADEDILLFTMSKFTGHSGSRFG  261 (427)
T ss_dssp             --GEEEEEESSCTTTCCCCC-CS----ST--TCEEEEECTTCSTT---TSCCC-SC--BCCSEEEEEHHHHTSCGGGCCE
T ss_pred             --ceEEEEcCCCCCcccccH-HH----Hc--CCCEEEeecccCCC---CCccc-cC--CCceEEEEeChhcCCCCCceEE
Confidence              347788899999999988 42    33  56788887663211   01111 11  35788999999998744 4578


Q ss_pred             EEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cH-----------HHHHH
Q 037144          311 CLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GV-----------ANLRN  377 (502)
Q Consensus       311 ~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~-----------~g~~~  377 (502)
                      +++++++....... ....+...                       ....+..+++...+  +.           +.+++
T Consensus       262 ~~~~~~~~l~~~l~-~~~~~~~~-----------------------~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~  317 (427)
T 2hox_A          262 WALIKDESVYNNLL-NYMTKNTE-----------------------GTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTF  317 (427)
T ss_dssp             EEEECCHHHHHHHH-HHHHHHTS-----------------------SCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHH
T ss_pred             EEEECCHHHHHHHH-HHHHhcCC-----------------------CCCHHHHHHHHHHhhcchhhhccccchhHHHHHH
Confidence            88886655433221 11111100                       00222222333222  11           23455


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCeEE--ec-----------CCCeeE-EEEEeecCcchhhhhhcccCCCcccccccchhHh
Q 037144          378 FIRSHVGMAKLFERLVTSDKRFEV--AF-----------PRNFSL-VCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEER  443 (502)
Q Consensus       378 ~~~~~~~la~~l~~~l~~~~~~~l--~~-----------~~~~~~-v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  443 (502)
                      ..+++.++++++.+.|++.+++++  +.           .|..++ +++.+...                          
T Consensus       318 ~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~p~~g~f~~~~~~~~--------------------------  371 (427)
T 2hox_A          318 GFKKLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEWE--------------------------  371 (427)
T ss_dssp             HHHHHHHHHHHHHHHHTTSSSEECCCCCSCEEETTTTEEECCCCSEEEEEECSG--------------------------
T ss_pred             HHHHHHHHHHHHHHHHHhCcCccccccccccccccccccCCCCceEEEEECCCc--------------------------
Confidence            667888899999999999888876  21           122233 33444321                          


Q ss_pred             hHHHHHHHHHHHH-hcCcEEEEeeeEC-CEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144          444 TNEFNRELLESIN-VSGKVFMTHAIVG-GIYVLRFAAGNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       444 ~~~~~~~l~~~l~-~~g~~~~~~~~~~-g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~  500 (502)
                          ..++.+++. +.|..+.++..+. +..++|+|+++   ++++++++++.|.++.+
T Consensus       372 ----~~~~~~~ll~~~gI~v~pg~~f~~~~~~~Ris~~~---~~e~l~~~l~~l~~~~~  423 (427)
T 2hox_A          372 ----EDKDCYQTFQNGRINTQNGVGFEASSRYVRLSLIK---TQDDFDQLMYYLKDMVK  423 (427)
T ss_dssp             ----GGCSHHHHHHHTTEECEEGGGGTSCTTEEEEECSS---CHHHHHHHHHHHHHHHT
T ss_pred             ----HHHHHHHHHHHCCEEEcCCCccCCCCCEEEEEecC---CHHHHHHHHHHHHHHHh
Confidence                113344443 4576544443333 35789999873   67799999999988764

>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}

Probab=99.59  E-value=2.3e-13  Score=135.87  Aligned_cols=353  Identities=12%  Similarity=0.063  Sum_probs=196.8

Q ss_pred             ccCCCCCCHHHHHHHHHHhhc-CCCCcc------cccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEE-cCCchHH
Q 037144           81 AYFPATSSVAGIVGEMLSSGF-NVVGLD------WISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVI-QGTTCEA  152 (502)
Q Consensus        81 ~~~~~~~~~~~~~~~~l~~~~-n~~~~~------~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~-t~ggt~a  152 (502)
                      ...++-+.....+.+.+.+.+ |.+.-+      |...-...++|.-+++..+++||++...     .++-+ ..||+.|
T Consensus        58 eLIASEN~~S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la~~rak~lF~a~~A~-----w~VNVQP~SGs~A  132 (490)
T 3ou5_A           58 ELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQ-----WGVNVQPYSGSPA  132 (490)
T ss_dssp             ECCTTCCCCCHHHHHHHTSGGGTCCCCC----------CHHHHHHHHHHHHHHHHTTCCTTT-----EEEECCCSSHHHH
T ss_pred             eEecCCCcCCHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHHHHHHHHHhCCCccc-----cCCCCCcCCHHHH
Confidence            334443333344555555544 444333      3344457899999999999999997542     02233 4489999


Q ss_pred             HHHHHHHHHHHHHHHhCccCCCCeEEEeCCC---CchhHHH-----HHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHH
Q 037144          153 LLCTLTAARDRVLKKIGRENISKLVVYSSDQ---THCAFQK-----AAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQI  224 (502)
Q Consensus       153 ~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~---~H~s~~~-----aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i  224 (502)
                      |+.+..+..+           |++.|+.-+.   +|.+.-.     .....|.-. +.+..++|++ ++.+|.+++++..
T Consensus       133 N~avy~All~-----------PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~-~~~~Y~vd~~-t~~IDyd~~~~~A  199 (490)
T 3ou5_A          133 NLAVYTALLQ-----------PHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFF-ESMPYKLNPK-TGLIDYNQLALTA  199 (490)
T ss_dssp             HHHHHHHHCC------------CCCEECBC-----------------------------CBCEETT-TTEECHHHHHHHH
T ss_pred             HHHHHHHHcC-----------CCCEEEecccCCCCcccccccCCCcccccccccc-cccccccCCC-CCcccHHHHHHHH
Confidence            9877666654           6777765444   3555432     223334311 3444555643 5799999999988


Q ss_pred             HHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCC
Q 037144          225 NLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLF  304 (502)
Q Consensus       225 ~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~  304 (502)
                      .+.+     |.+|++  |.+..-..-|++++.+||++.|++|++|.||-++......+...+.   .||++|.+.||+|.
T Consensus       200 ~~~k-----PklIi~--G~SaY~r~id~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~~---~ADvVTtTTHKTLr  269 (490)
T 3ou5_A          200 RLFR-----PRLIIA--GTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFK---HADIVTTTTHKTLR  269 (490)
T ss_dssp             HHHC-----CSEEEE--CCSSCCSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGG---TCSEEEEESSSTTC
T ss_pred             hhcC-----CCeEEE--CCccCccccCHHHHHHHHhhcccEEEechhhhhhhhcccccCCccc---cceEEecccccccc
Confidence            7753     666665  3445556678999999999999999999999777665443333333   79999999999999


Q ss_pred             CCCcceEEEeeCchhhhhh-hcCCcccccCccCCCCCcccccCCC-cccccCCCCCCch-HHHHHHHHhcHHHHHHHHHH
Q 037144          305 TTLDCCCLWVKDPSCLLST-LSTNPQYLKNEATDQEPKEQEVGYK-DWQITLCRRFRSL-KLWVVIRNFGVANLRNFIRS  381 (502)
Q Consensus       305 ~p~~~g~~~~r~~~~l~~~-~~~~~~yl~~~~~~~~~~~~~~~~~-~~~~~~sr~~~al-~~~~~l~~~g~~g~~~~~~~  381 (502)
                      +|. .|++++++...-.+. ......|-..         ..++.. -.+++++-....+ +...+++..-...+.+..++
T Consensus       270 GPr-GG~Il~~~~~~~~~~k~~~~~~~~~~---------kkin~aVFPg~qggp~~h~IAAkAVaf~Ea~~p~fk~Ya~q  339 (490)
T 3ou5_A          270 GAR-SGLIFYRKGVKAVDPKTGREIPYTFE---------DRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQ  339 (490)
T ss_dssp             SCS-CEEEEEECSEEEECC--CCEEECCCH---------HHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred             CCC-ceEEEeccccccccccccchhHHHHH---------HHHHhhcCccccccchHHHHHHHHHHHHHHHhHhHHHHHHH
Confidence            996 677777763110000 0000000000         000000 0022222222222 22333443334567888999


Q ss_pred             HHHHHHHHHHHHhcCCCeEEecC-CCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCc
Q 037144          382 HVGMAKLFERLVTSDKRFEVAFP-RNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGK  460 (502)
Q Consensus       382 ~~~la~~l~~~l~~~~~~~l~~~-~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~  460 (502)
                      ..++|+.|.+.|.+. |+.++.- ....++.+.+.+.++.                        .   ++..+.|.+.|+
T Consensus       340 Vv~NAkaLA~~L~~~-G~~vvsGgTdnHlvLvDl~~~g~t------------------------G---~~ae~~Le~agI  391 (490)
T 3ou5_A          340 VLKNARAMADALLER-GYSLVSGGTDNHLVLVDLRPKGLD------------------------G---ARAERVLELVSI  391 (490)
T ss_dssp             HHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGGGTCC------------------------H---HHHHHHHHHTTE
T ss_pred             HHHHHHHHHHHHHhC-CCeeecCCCCceEEEEeccccCCC------------------------H---HHHHHHHHHcCc
Confidence            999999999999987 8999852 3345666666554321                        1   122233333465


Q ss_pred             EEEEeeeEC-----CEEEEEEEec---CCCCcHHHHHHHHHHHHHHH
Q 037144          461 VFMTHAIVG-----GIYVLRFAAG---NSMTMESHVRAAWTVVQEHL  499 (502)
Q Consensus       461 ~~~~~~~~~-----g~~~lR~~~~---~~~t~~~di~~~~~~l~~~~  499 (502)
                      ..-.-+...     ....||+...   ...-.++|++++.+.|.+++
T Consensus       392 tvNkN~iP~D~sp~~~SGiRiGTpa~TtRG~~e~dm~~IA~~I~~~l  438 (490)
T 3ou5_A          392 TANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGV  438 (490)
T ss_dssp             ECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred             EECCCCCCCCCCCCCCCeeEECCHHHHhCCCCHHHHHHHHHHHHHHH
Confidence            322111111     1236899863   23356678888888877654

>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}

Probab=99.54  E-value=6.8e-14  Score=142.64  Aligned_cols=328  Identities=10%  Similarity=-0.010  Sum_probs=191.6

Q ss_pred             HHHHHHHhhcCCCC-cccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCc
Q 037144           92 IVGEMLSSGFNVVG-LDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGR  170 (502)
Q Consensus        92 ~~~~~l~~~~n~~~-~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~  170 (502)
                      .+.++....+..+. ..|....+..++.+.+.+++   +|-....   +.-..+-|.|||.|+..++......+.     
T Consensus        66 ~Vk~A~~~~~~~~~~~~Y~p~~G~p~lr~aia~~~---~g~~~~~---~~~~~~qt~ggtga~~~a~~~l~~~~~-----  134 (420)
T 4h51_A           66 VVRKAEQLLLDMNLDYEYLPISGYQPFIDEAVKII---YGNTVEL---ENLVAVQTLSGTGAVSLGAKLLTRVFD-----  134 (420)
T ss_dssp             HHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHH---HC---CG---GGEEEEEEEHHHHHHHHHHHHHTTTSC-----
T ss_pred             HHHHHHHHHhcCCCCCCCCCcCChHHHHHHHHHHh---cCCCccc---cccceeeecCchHHHHHHHHHHHHhcC-----
Confidence            34444444443333 35877788888988887765   3321110   001345588899888776655433211     


Q ss_pred             cCCCCeEEEeCCCCchhHHHHHHHcCCCCCCE-EEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144          171 ENISKLVVYSSDQTHCAFQKAAQIVGIDRKNI-RAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV  249 (502)
Q Consensus       171 ~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v-~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i  249 (502)
                        .+++.|+++++++.+.....+..|.   .. ...+....+++.+|.+.+.+.+....+   ...+++.+.++|+||..
T Consensus       135 --~pgd~V~ip~P~w~~y~~i~~~aG~---~~V~~~~~~~~~~~~~d~~~~~~~l~~~~~---~~~vll~~~p~NPtG~~  206 (420)
T 4h51_A          135 --AETTPIYLSDPTWPNHYGVVKAAGW---KNICTYAYYDPKTVSLNFEGMKKDILAAPD---GSVFILHQCAHNPTGVD  206 (420)
T ss_dssp             --TTTSCEEEEESCCTHHHHHHHHTTC---CCEEEEECEEGGGTEECHHHHHHHHHHSCS---SCEEEEESSSCTTTCCC
T ss_pred             --CCCCEEEEecCCchhHHHHHHHcCC---eEEEeeccccccccCCCHHHHHHHHhccCC---CcEEEEeCCCCCCCCCC
Confidence              1678899999999999999999998   64 444443334578899999998876432   24567778899999998


Q ss_pred             ---CChhHHHHHHHHhCCEEEeecccccccccCccchh---h-hcCCCCCCeeEEccCCcCCC-CCcceEEEeeCchh--
Q 037144          250 ---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRH---F-IDGVECVDSFSFNPHKWLFT-TLDCCCLWVKDPSC--  319 (502)
Q Consensus       250 ---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~---~-~~~~~~aDsi~~~~hK~l~~-p~~~g~~~~r~~~~--  319 (502)
                         +.+++|+++|++++++++.|.+|.++.........   + ......--.++.++.|.++. ...+|++.+.....  
T Consensus       207 ~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RvG~~~~~~~~~~~  286 (420)
T 4h51_A          207 PSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFARRGIEVLLAQSFSKNMGLYSERAGTLSLLLKDKTK  286 (420)
T ss_dssp             CCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSCHHH
T ss_pred             CCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhHHhhCceEEEEeccccccccccCceEEEEecccCHHH
Confidence               56889999999999999999999876543211110   0 00000112455679998764 46688877654421  


Q ss_pred             hhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc--------HHHHHHHHHHHHHHHHHHHH
Q 037144          320 LLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG--------VANLRNFIRSHVGMAKLFER  391 (502)
Q Consensus       320 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g--------~~g~~~~~~~~~~la~~l~~  391 (502)
                      ........ ..+....                  .+ ...+.....+...+.        .+-+..+.+++.++++.|.+
T Consensus       287 ~~~~~~~l-~~~~r~~------------------~s-~~p~~~a~~~~~~l~d~~l~~~~~~~~~~m~~r~~~~R~~l~~  346 (420)
T 4h51_A          287 RADVKSVM-DSLIREE------------------YT-CPPAHGARLAHLILSNNELRKEWEAELSAMAERIRTMRRTVYD  346 (420)
T ss_dssp             HHHHHHHH-HHHHHTT------------------TS-SCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHH-HHhhhcc------------------cC-cchHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            11000000 0000000                  00 001122222222221        23456677788889999999


Q ss_pred             HHhcCC--C-eEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeE
Q 037144          392 LVTSDK--R-FEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIV  468 (502)
Q Consensus       392 ~l~~~~--~-~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~  468 (502)
                      .|++..  + |..+ +++.++++|.  +..                              .+.++.|.+.|+ ++.+   
T Consensus       347 ~L~~~g~~~~~~~i-~~q~GmF~~~--gls------------------------------~e~v~~L~e~~V-y~~~---  389 (420)
T 4h51_A          347 ELLRLQTPGSWEHV-INQIGMFSFL--GLS------------------------------KAQCEYCQNHNI-FITV---  389 (420)
T ss_dssp             HHHHTTCSSCCTHH-HHCCSSEEEC--CCC------------------------------HHHHHHHHHTTE-ECCT---
T ss_pred             HHHHhCCCCCCCee-cCCCceEEec--CcC------------------------------HHHHHHHHhCCE-EEcC---
Confidence            998762  1 2222 2344666652  211                              112344545564 4433   


Q ss_pred             CCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          469 GGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       469 ~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      .|    |||+++  .+++.|+++.++|.++.++
T Consensus       390 ~g----Ris~Ag--l~~~ni~~~a~aI~~vvr~  416 (420)
T 4h51_A          390 SG----RANMAG--LTHETALMLAQTINDAVRN  416 (420)
T ss_dssp             TC----EEEGGG--CCHHHHHHHHHHHHHHHC-
T ss_pred             CC----EEEecc--CCHHHHHHHHHHHHHHHHH
Confidence            12    999875  3667999999999998764

>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*

Probab=99.47  E-value=6.4e-12  Score=128.79  Aligned_cols=307  Identities=10%  Similarity=0.012  Sum_probs=168.0

Q ss_pred             HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcC
Q 037144          117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVG  196 (502)
Q Consensus       117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~G  196 (502)
                      +|.++.+.+++++.-.+        ...|++||||||..|+..||... .       +..+|......|-...-.....+
T Consensus       128 ~~~~lae~l~~~~p~~~--------~v~f~~SGsEA~e~AiklAr~~t-g-------r~~ii~~~~~yHG~t~~~~~~~~  191 (454)
T 4ao9_A          128 LEGRLARLICERFPQIE--------QLRFTNSGTEANLMALTAALHFT-G-------RRKIVVFSGGYHGGVLGFGARPS  191 (454)
T ss_dssp             SHHHHHHHHHHHSTTCS--------EEEEESSHHHHHHHHHHHHHHHH-T-------CCEEEEETTCBCSTTCBBSSSBC
T ss_pred             HHHHHHHHHHHhCCCCC--------EEEEeCchHHHHHHHHHHHHhcc-c-------CCeEEEEeCCcCCcccccccccc
Confidence            44556677777774322        57999999999999999998753 1       23344444445543211100011


Q ss_pred             CC--CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHHHHHhCCEEEeec
Q 037144          197 ID--RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDVAKQFGIWVHVDA  270 (502)
Q Consensus       197 lg--~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~~~~g~~lhVDa  270 (502)
                      -.  ......+|.       -|++.+++.|++...   ...+|++.......|.+-|    |++|.++|++||++|++|.
T Consensus       192 ~~~~~~~~~~~p~-------nd~~~l~~~l~~~~~---~iAavIvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DE  261 (454)
T 4ao9_A          192 PTTVPFDFLVLPY-------NDAQTARAQIERHGP---EIAVVLVEPMQGASGCIPGQPDFLQALRESATQVGALLVFDE  261 (454)
T ss_dssp             TTSCCSEEEEECT-------TCHHHHHHHHHHTGG---GEEEEEECSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEEC
T ss_pred             CccCCCCcccCCC-------chHHHHHHHHhhcCC---ceEEEEeccccCCCCccCCchhhHHHHHHHHhhcCCEEEEEC
Confidence            00  002233332       388999999976432   2456777665666788877    9999999999999999999


Q ss_pred             ccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcc
Q 037144          271 AYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDW  350 (502)
Q Consensus       271 A~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~  350 (502)
                      ++.|  .....+..-..|+ ..|.+|++  |.++..++.|.+..++. . .+.+......+....               
T Consensus       262 V~tG--R~G~~~a~e~~gv-~PDi~t~g--K~lggG~Piga~~~~~e-i-~~~~~~~~~~~~h~~---------------  319 (454)
T 4ao9_A          262 VMTS--RLAPHGLANKLGI-RSDLTTLG--KYIGGGMSFGAFGGRAD-V-MALFDPRTGPLAHSG---------------  319 (454)
T ss_dssp             TTGG--GGSTTCHHHHHTC-CCSEEEEE--GGGGTTSSCEEEEECHH-H-HGGGCTTTCSCCCCC---------------
T ss_pred             CCcC--CCccccchhccCC-CCcEEEec--cccCCCCcceeeeeHHH-H-HHHHhhccCCccccC---------------
Confidence            9864  2222222222244 57888876  88876677888887644 2 233322111111100               


Q ss_pred             cccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----CC-eEEecCCCeeEEEEEeecCcchhhhhh
Q 037144          351 QITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD----KR-FEVAFPRNFSLVCFRVTPSAVMDKLRT  425 (502)
Q Consensus       351 ~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~----~~-~~l~~~~~~~~v~f~~~~~~~~~~~~~  425 (502)
                      |+ .+.+..+.+..++|+.+-.+   +..++..++.++|+++|+++    +- .++-+  ...++.+.+.......    
T Consensus       320 T~-~gnPla~AAala~L~~l~~~---~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg--~G~m~gi~f~~~~~~~----  389 (454)
T 4ao9_A          320 TF-NNNVMTMAAGYAGLTKLFTP---EAAGALAERGEALRARLNALCANEGVAMQFTG--IGSLMNAHFVQGDVRS----  389 (454)
T ss_dssp             TT-TTCHHHHHHHHHHHHHTSCH---HHHHHHHHHHHHHHHHHHHHHHHHTBSCEEEE--ETTEEEEESCCSCCCS----
T ss_pred             CC-CCCHHHHHHHHHHHHHHhcc---ChhHHHHHHHHHHHHHHHHHHhhCCCCEEEee--eceEEEEEEecCCCCC----
Confidence            11 11111223334455555433   34556666777777776542    21 11211  1224444443221100    


Q ss_pred             cccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          426 KYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       426 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                            ..    . ......++...+...+.++|.+ +.+.   +  .+.  +.-++ |++|||+++++|++++.+
T Consensus       390 ------~~----~-~~~~d~~~~~~~~~~ll~~Gv~-~~p~---~--~~~--~s~~~-T~~dId~~l~al~~~l~~  445 (454)
T 4ao9_A          390 ------SE----D-LAAVDGRLRQLLFFHLLNEDIY-SSPR---G--FVV--LSLPL-TDADIDRYVAAIGSFIGG  445 (454)
T ss_dssp             ------GG----G-GTTCCHHHHHHHHHHHHHTTEE-CCTT---C--EEE--CCTTC-CHHHHHHHHHHHHHHHHH
T ss_pred             ------HH----H-HHhhhHHHHHHHHHHHHHCCEE-EcCC---C--CEE--EeCCC-CHHHHHHHHHHHHHHHHh
Confidence                  00    0 0000133456677788888853 3331   1  222  33333 567999999999998765

>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*

Probab=99.15  E-value=1.1e-14  Score=150.09  Aligned_cols=307  Identities=9%  Similarity=-0.018  Sum_probs=166.0

Q ss_pred             HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCC-CCchhHHHHH-
Q 037144          115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSD-QTHCAFQKAA-  192 (502)
Q Consensus       115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~-~~H~s~~~aa-  192 (502)
                      .+.+.++.+.|+++++ ..+       ..+|++|||+||..|+.++|...         ++..|++.+ ..|.+...+. 
T Consensus       139 ~~~~~~Lae~L~~~~p-~~~-------~v~~~nSGseA~~~Aik~ar~~t---------gr~~ii~~~~~yHG~~~~~~s  201 (465)
T 2yky_A          139 TENEALFAEAVCDRFP-SID-------LVRFTNSGTEANLMALATATAIT---------GRKTVLAFDGGYHGGLLNFAS  201 (465)
Confidence            4455566677778774 112       47899999999999999887431         233444444 4454333322 


Q ss_pred             --HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHHHHHhCCEE
Q 037144          193 --QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDVAKQFGIWV  266 (502)
Q Consensus       193 --~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~~~~g~~l  266 (502)
                        ...|+.. .++.+|.       -|+++|+++|++..   ..+.+|++....+++|.+-|    +++|.++|++||++|
T Consensus       202 g~~~~g~~~-~~~~~~~-------~d~~~l~~~l~~~~---~~~aavi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~ll  270 (465)
T 2yky_A          202 GHAPTNAPY-HVVLGVY-------NDVEGTADLLKRHG---HDCAAILVEPMLGAGGCVPAERAFLDLLRAEASRCGALL  270 (465)
Confidence              1122211 1222221       37899999997421   12336666655556897766    999999999999999


Q ss_pred             EeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcC---CcccccCccCCCCCccc
Q 037144          267 HVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLST---NPQYLKNEATDQEPKEQ  343 (502)
Q Consensus       267 hVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~---~~~yl~~~~~~~~~~~~  343 (502)
                      ++|.+|. + ...+....-..++ ..|.++  +.|+++.+...|+++.++. .. +.+..   .+-+...          
T Consensus       271 I~DEv~~-~-r~g~~~a~~~~gv-~pDi~t--~sK~lg~G~piG~v~~~~~-i~-~~l~~~~~g~~~~~~----------  333 (465)
T 2yky_A          271 IFDEVMT-S-RLSGGGAQEMLGI-SADLTT--LGKYIGGGMSFGAFGGRRD-LM-ERFDPARDGAFAHAG----------  333 (465)
Confidence            9999998 4 2211110001122 356665  5699987777888776543 21 22211   0001100          


Q ss_pred             ccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEe--cCCCeeEEEEEeecCcch
Q 037144          344 EVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK-RFEVA--FPRNFSLVCFRVTPSAVM  420 (502)
Q Consensus       344 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~-~~~l~--~~~~~~~v~f~~~~~~~~  420 (502)
                             ++ ++.+....+..++++.+..+   .+.++..++.++|+++|+++- .+.+.  .+....++.|.+......
T Consensus       334 -------T~-~~npla~aAa~aaL~~l~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~g~G~~~~i~~~~~~~~  402 (465)
T 2yky_A          334 -------TF-NNNILTMSAGHAALTQIYTR---QAASDLSASGDRFRANLNRIAVENQAPLQFTGLGSLGTIHFSRAPIR  402 (465)
Confidence                   11 11122223333445544332   466777888888888887641 12221  123344566655321100


Q ss_pred             hhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144          421 DKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~  500 (502)
                      ..               ........+...++.+++.++|.++.+.. +.   .  +++   ..+++||++++++|.++.+
T Consensus       403 ~~---------------~~~~~~d~~~~~~~~~~ll~~GV~v~p~~-~~---~--~s~---~~t~edid~~l~~l~~~l~  458 (465)
T 2yky_A          403 SA---------------GDVRAADQQLKELFFFHMLRKGIYLAPRG-MY---A--LSL---EIADAGRDAFAEALADFIG  458 (465)
Confidence            00               00000001234567778888887543332 21   1  333   3466799999999988765


Q ss_pred             h
Q 037144          501 A  501 (502)
Q Consensus       501 ~  501 (502)
                      +
T Consensus       459 ~  459 (465)
T 2yky_A          459 E  459 (465)
Confidence            4

>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*

Probab=99.42  E-value=3.8e-10  Score=116.03  Aligned_cols=318  Identities=13%  Similarity=0.041  Sum_probs=177.7

Q ss_pred             HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEE-eCCCCchhHHHHHHHc
Q 037144          117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVY-SSDQTHCAFQKAAQIV  195 (502)
Q Consensus       117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~-~s~~~H~s~~~aa~~~  195 (502)
                      .+.++.+.|.+++..+..      ...+|++||||||..|+..||...         ++..|+ .....|-...-+....
T Consensus       108 ~~~~lae~L~~~~p~~~~------~~v~f~~sGsEA~e~AlklAr~~t---------~r~~ii~~~~~yHG~t~~als~t  172 (456)
T 4atq_A          108 GYVAVTEQLNRLTPGDHA------KRTVLFNSGAEAVENAVKVARLAT---------GRDAVVAFDHAYHGRTNLTMALT  172 (456)
T ss_dssp             HHHHHHHHHHHHSSCSSC------EEEEEESSHHHHHHHHHHHHHHHH---------CCCEEEEETTCCCCSSHHHHHHC
T ss_pred             HHHHHHHHHHHhCCCCCC------cEEEEeCChHHHHHHHHHHHhhhh---------cCCeEEEEecccCCccccccccc
Confidence            334566778888743321      147899999999999999998753         233344 4444564433333333


Q ss_pred             CCC----------CCCEEEEecCCC----CCcccCHHHHHHHHHHHHh--cCCccEEEEEecCCccccccCC----hhHH
Q 037144          196 GID----------RKNIRAIKTTKS----SSYGLSAESVLSQINLDVE--AELIPLFLCATVGTTAITAVDP----LKPL  255 (502)
Q Consensus       196 Glg----------~~~v~~v~~~~~----~~~~~d~~~Le~~i~~~~~--~g~~p~~Vv~t~gtt~~G~idp----l~eI  255 (502)
                      |-.          ...+..+|....    ....-+.+.+++.++...+  .+..+.+|++--.....|.+-|    +++|
T Consensus       173 ~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~l  252 (456)
T 4atq_A          173 AKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAITMIEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPAL  252 (456)
T ss_dssp             CCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHH
T ss_pred             cCccccccCCCCccccceecccccccccCCCcccHHHHHHHHHHHHHHhhcCCceEEEEeccccCCCCccccchhhhHHH
Confidence            221          124666765320    0112345566655543221  2334566777655555677744    9999


Q ss_pred             HHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCcc
Q 037144          256 CDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEA  335 (502)
Q Consensus       256 ~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~  335 (502)
                      .++|++||+.|++|.++.|+.....-+..-.-++ ..|.++++  |.++..+..|.++.+++.  .+.+.  +....+  
T Consensus       253 r~lc~~~gillI~DEV~tG~GRtG~~~a~e~~gv-~PDivt~g--K~lggg~P~~av~~~~~i--~~~~~--~~~~~~--  323 (456)
T 4atq_A          253 SEWAKEKGIVFIADEVQSGFCRTGEWFAVDHEGV-VPDIITMA--KGIAGGLPLSAITGRADL--LDAVH--PGGLGG--  323 (456)
T ss_dssp             HHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTC-CCSEEEEC--GGGGTTSSCEEEEEEHHH--HTTSC--TTSSCC--
T ss_pred             HHHHhhcCCceEecccccccCCccccccccccCC-CCchhhhh--hcccCcCCceeeEecHHH--Hhccc--ccCCCC--
Confidence            9999999999999999987644332222222244 58999887  777766778888887542  12221  111110  


Q ss_pred             CCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----CC--eEEecCCC--e
Q 037144          336 TDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD----KR--FEVAFPRN--F  407 (502)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~----~~--~~l~~~~~--~  407 (502)
                                     |+ .+.+..+.+..++++.+-+++   +.++..++.++|.++|+++    +.  ..++...+  .
T Consensus       324 ---------------Tf-~gnpla~aaala~L~~i~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~~~~~~v~~VRG~G  384 (456)
T 4atq_A          324 ---------------TY-GGNPVACAAALAAIDTMEQHD---LNGRARHIEELALGKLRELAAELSAGGGSVVGDIRGRG  384 (456)
T ss_dssp             ---------------SS-SSCHHHHHHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHHHHCC-----CEEEEEEET
T ss_pred             ---------------CC-CCChHHHHhhHHHHHHHhhcc---HHHHHHHHHHHHHHHHHHHHHhcccccCCceEEeeecc
Confidence                           11 111122233344444444443   4455566666666666542    21  11121111  1


Q ss_pred             eEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHH
Q 037144          408 SLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESH  487 (502)
Q Consensus       408 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~d  487 (502)
                      .++.+.+..+..                     .+...++..++.+++.++|.++.....  ...+||++.. ...++++
T Consensus       385 l~~giel~~~~~---------------------~~~~~~~~~~v~~~~~~~Gvl~~~~g~--~~~~irl~Pp-L~it~~~  440 (456)
T 4atq_A          385 AMLAIELVQPGS---------------------KEPNAELTKAVAAACLKEGVIILTCGT--YGNVIRLLPP-LVISDEL  440 (456)
T ss_dssp             TEEEEEEBCTTS---------------------CCBCHHHHHHHHHHHHHTTEECEEECT--TSCEEEECCC-TTCCHHH
T ss_pred             eEEEEEEecCCC---------------------CCcCHHHHHHHHHHHHHCCCEEEecCC--CCCEEEEECC-CCCCHHH
Confidence            244454432210                     000134567788888899975443322  2347898753 3467889


Q ss_pred             HHHHHHHHHHHHHh
Q 037144          488 VRAAWTVVQEHLEA  501 (502)
Q Consensus       488 i~~~~~~l~~~~~~  501 (502)
                      ||++++.|.++++.
T Consensus       441 id~~l~~l~~al~a  454 (456)
T 4atq_A          441 LIDGLEVLAAAIKA  454 (456)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999998775

>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A

Probab=99.29  E-value=1.3e-09  Score=112.45  Aligned_cols=326  Identities=9%  Similarity=0.013  Sum_probs=174.9

Q ss_pred             HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcC
Q 037144          117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVG  196 (502)
Q Consensus       117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~G  196 (502)
                      .+.++.+.|.++...+-+       .++|++|||+||..|++.||.....+ +..+ +..+|-.....|-...-++...|
T Consensus       112 ~~~~lAe~L~~~~p~~~~-------~v~f~~sGsEA~e~AiKlAr~~~~~~-g~~~-r~~ii~~~~~yHG~t~~a~s~tg  182 (473)
T 4e3q_A          112 QTVMLSEKLVEVSPFDSG-------RVFYTNSGSEANDTMVKMLWFLHAAE-GKPQ-KRKILTRWNAYHGVTAVSASMTG  182 (473)
T ss_dssp             HHHHHHHHHHHHSSCSSC-------EEEEESSHHHHHHHHHHHHHHHHHHT-TCTT-CCEEEEETTCCCCSSHHHHHHSC
T ss_pred             HHHHHHHHHHhhCCCCcc-------EEEEeCchHHHHHHHHHHHHHHHHhc-CCCC-cceEEEeeceECCCccccccccc
Confidence            444567788888754432       58999999999999999998754332 2111 22233334445644444444332


Q ss_pred             --------CCCCCEEEEecCC----CCCccc-------CHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hh
Q 037144          197 --------IDRKNIRAIKTTK----SSSYGL-------SAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LK  253 (502)
Q Consensus       197 --------lg~~~v~~v~~~~----~~~~~~-------d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~  253 (502)
                              .....+..++...    ...+..       ..++|++.|.+..  ...+.+|++--.....|.+-|    ++
T Consensus       183 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~--~~~iAavi~EPiqg~gG~~~p~~~fl~  260 (473)
T 4e3q_A          183 KPYNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQFVARLARELEETIQREG--ADTIAGFFAEPVMGAGGVIPPAKGYFQ  260 (473)
T ss_dssp             CGGGGGGTCSCTTEEEECCCCHHHHSCTTCCHHHHHHHHHHHHHHHHHHHC--GGGEEEEEECSSBSTTTSBCCCTTHHH
T ss_pred             cccccccCCCCCcccccCCCcccccccccchhhHHHHHHHHHHHHHHHhhC--CCceEEEEeCCccCCCCceeCCHHHHH
Confidence                    2223455555421    000111       1344555554321  123456666655555677644    89


Q ss_pred             HHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCccccc
Q 037144          254 PLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQYLK  332 (502)
Q Consensus       254 eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~  332 (502)
                      +|.++|++||+.|++|..+.|+.....-+..-..++ ..|.+++.  |.++.. ++.|.++++++- . +.+........
T Consensus       261 ~lr~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv-~PDi~t~~--K~l~gG~~Pl~av~~~~~i-~-~~~~~~~~~~~  335 (473)
T 4e3q_A          261 AILPILRKYDIPVISDEVICGFGRTGNTWGCVTYDF-TPDAIISS--KNLTAGFFPMGAVILGPEL-S-KRLETAIEAIE  335 (473)
T ss_dssp             HHHHHHHHTTCCEEEECTTTSSSTTSSSCHHHHTTC-CCSEEEEC--GGGGTTSSCCEEEEECHHH-H-HHHHHHHHHHS
T ss_pred             HHHHHhcccceEEeccCccccCCcccchhHHHhcCC-CCChHHhc--ccccCCCCCcccccccHHH-H-HHhcccccccc
Confidence            999999999999999999988644333222222344 58988876  888655 678888887542 1 22211100000


Q ss_pred             CccCCCCCcccccCCCcccccCCCCCCchHHH---HHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCeEEecCCC
Q 037144          333 NEATDQEPKEQEVGYKDWQITLCRRFRSLKLW---VVIRNFGVANLRNFIRSHVGMAKLFERLVTSD---KRFEVAFPRN  406 (502)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~---~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~---~~~~l~~~~~  406 (502)
                      ...            ...|+    ...++++.   ++++.+-++   .++++..++.++|.++|+++   |.+.=+. -.
T Consensus       336 ~~~------------hg~T~----~Gnpla~Aaala~L~~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~~v~~vR-G~  395 (473)
T 4e3q_A          336 EFP------------HGFTA----SGHPVGCAIALKAIDVVMNE---GLAENVRRLAPRFEERLKHIAERPNIGEYR-GI  395 (473)
T ss_dssp             CCC------------CCCTT----TTCHHHHHHHHHHHHHHHHS---SHHHHHHHHHHHHHHHHHHHTTSTTEEEEE-EE
T ss_pred             ccc------------cCCCC----CCCcchhhhhhhhhhhhccc---cHHHHHHHHHHHHHHHHHHHhcCCCeeEEe-ec
Confidence            000            00010    11334333   444444333   34556667777887777653   3332110 01


Q ss_pred             eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHH
Q 037144          407 FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMES  486 (502)
Q Consensus       407 ~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~  486 (502)
                      ..++.+.+.......               .  ..........++.+.+.++|.+..+.    | ..+|++.. ...+++
T Consensus       396 Gl~~gielv~~~~~~---------------~--~~~~~~~~~~~~~~~~~~~Gll~~~~----g-~~i~l~PP-L~it~~  452 (473)
T 4e3q_A          396 GFMWALEAVKDKASK---------------T--PFDGNLSVSERIANTCTDLGLICRPL----G-QSVVLCPP-FILTEA  452 (473)
T ss_dssp             TTEEEEEECSBTTTT---------------B--CCCGGGCHHHHHHHHHHHTTEECEEE----T-TEEEECCC-TTCCHH
T ss_pred             ceEEEEEEecCcccc---------------c--cccccHHHHHHHHHHHHHCCcEEEec----C-CEEEEeCC-CCCCHH
Confidence            123444443211000               0  00001223557788888889653222    2 36888742 446788


Q ss_pred             HHHHHHHHHHHHHHh
Q 037144          487 HVRAAWTVVQEHLEA  501 (502)
Q Consensus       487 di~~~~~~l~~~~~~  501 (502)
                      +||++++.+.+++++
T Consensus       453 eid~~~~~l~~al~~  467 (473)
T 4e3q_A          453 QMDEMFDKLEKALDK  467 (473)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999998887654

>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*

Probab=99.18  E-value=1e-09  Score=120.81  Aligned_cols=328  Identities=13%  Similarity=0.030  Sum_probs=166.1

Q ss_pred             HHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccC------CCCe-EEEeCCCCchhHHHHH
Q 037144          120 IVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGREN------ISKL-VVYSSDQTHCAFQKAA  192 (502)
Q Consensus       120 ~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~------~~~~-~v~~s~~~H~s~~~aa  192 (502)
                      ++.+.|+++++-+.-      ..++|++|||+||-.|+..|+.++..+.|..+      .++. +|......|-+..-++
T Consensus       428 ~Lae~L~~~~p~~~l------~~vff~~SGSeA~E~AlK~A~r~~~~~~g~~~~~~~~~~~r~~iI~~~~syHG~T~gal  501 (831)
T 4a0g_A          428 KCAELLLDGVGKGWA------SRVYFSDNGSTAIEIALKMAFRKFCVDHNFCEATEEEKHIVVKVIALRGSYHGDTLGAM  501 (831)
T ss_dssp             HHHHHHHHTTTTTTC------CEEEEESSHHHHHHHHHHHHHHHHHHTTTC---------CCEEEEEETTCCCCSSHHHH
T ss_pred             HHHHHHHHhCCCCCC------CEEEECCChhHHHHHHHHHHHHHHHhhcCCCccccccccCccEEEEecCCcccCceeee
Confidence            455667777653210      15899999999999999999543333222210      0233 4444555677777777


Q ss_pred             HHcCCCC-------------------------CCEEEEecCCC------CC-cccC------------------HHHHHH
Q 037144          193 QIVGIDR-------------------------KNIRAIKTTKS------SS-YGLS------------------AESVLS  222 (502)
Q Consensus       193 ~~~Glg~-------------------------~~v~~v~~~~~------~~-~~~d------------------~~~Le~  222 (502)
                      ...|...                         ..+..++....      +. -.-+                  .++|++
T Consensus       502 s~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~  581 (831)
T 4a0g_A          502 EAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSNGSWNISLPESFSEIAPEYGTFTSRDEIFDKSRDASTLARIYSAYLSK  581 (831)
T ss_dssp             HTSCCCGGGSTTTCTTCCCCEEEECCCEEEEETTEEEEECCTTSCCCCSSTTEESCHHHHHCGGGGGSHHHHHHHHHHHH
T ss_pred             eccCccccccccccccccCCccccCCccccccCCceEecCCccccccccccccccchhhhhcccccchhhhHHHHHHHHH
Confidence            7665310                         01122332210      00 0001                  256777


Q ss_pred             HHHHHH--hcCCccEEEEEecC-CccccccCC----hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCee
Q 037144          223 QINLDV--EAELIPLFLCATVG-TTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSF  295 (502)
Q Consensus       223 ~i~~~~--~~g~~p~~Vv~t~g-tt~~G~idp----l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi  295 (502)
                      .|++..  ..+..+.+|++-.. ....|.+-|    +++|.++|++||+++++|.++.|+......+..-..++ ..|.+
T Consensus       582 ~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv-~PDii  660 (831)
T 4a0g_A          582 HLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVETTTELLGC-KPDIA  660 (831)
T ss_dssp             HC---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSSTHHHHSS-CCSEE
T ss_pred             HHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCCchhhHhcCC-CCcEE
Confidence            765421  11233455555543 455666654    99999999999999999999877533322221111234 57888


Q ss_pred             EEccCCcCCCC-CcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHH---HHHHHhc
Q 037144          296 SFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLW---VVIRNFG  371 (502)
Q Consensus       296 ~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~---~~l~~~g  371 (502)
                      |++  |.++.. ...|++++++.  +.+.+...... .                .+....+....++.+.   ++++.+.
T Consensus       661 tls--K~L~gG~~Plgav~~~~~--i~~~~~~~~~~-~----------------~~~hg~T~~g~Pla~Aaala~L~~i~  719 (831)
T 4a0g_A          661 CFA--KLLTGGMVPLAVTLATDA--VFDSFSGDSKL-K----------------ALLHGHSYSAHAMGCATAAKAIQWFK  719 (831)
T ss_dssp             EEC--GGGGTTSSCCEEEEECHH--HHHTTCSSCGG-G----------------SCCCCCTTTTCHHHHHHHHHHHHHHH
T ss_pred             EEe--cccccCccCcEEEEECHH--HHHHHhccccc-c----------------cceeecCCcccHHHHHHHHHHHHHHH
Confidence            755  988665 36788887644  22333221100 0                0000011111333333   3444432


Q ss_pred             HHHHHHHHHHH-HHH----HHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHH
Q 037144          372 VANLRNFIRSH-VGM----AKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNE  446 (502)
Q Consensus       372 ~~g~~~~~~~~-~~l----a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  446 (502)
                      .+.+.+.+.+. ..+    .+.+.+.+.+.|.+.-+. ....++.+.+......                   . .....
T Consensus       720 ~~~l~~~~~~~~~~l~~~l~~~l~~~l~~~~~v~~vr-g~Gl~~~iel~~~~~~-------------------~-~~~~~  778 (831)
T 4a0g_A          720 DPETNHNITSQGKTLRELWDEELVQQISSHSAVQRVV-VIGTLFALELKADASN-------------------S-GYASL  778 (831)
T ss_dssp             CTTTCTTBCTTSSBBCCCSCHHHHHHHHHSTTEEEEE-EETTEEEEEEC-----------------------------CH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCceeEe-ecccEEEEEEecCccc-------------------c-ccchH
Confidence            22221111110 111    223445566666654432 2223455555322100                   0 00012


Q ss_pred             HHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHhC
Q 037144          447 FNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEAF  502 (502)
Q Consensus       447 ~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~~  502 (502)
                      ...++.+.+.++|.++ .+.   + ..||++.. +..+++||+++++.|.++.+++
T Consensus       779 ~a~~~~~~l~e~Gv~v-~p~---g-~~lrl~pp-~~~t~e~id~~~~~l~~~l~~l  828 (831)
T 4a0g_A          779 YAKSLLIMLREDGIFT-RPL---G-NVIYLMCG-PCTSPEICRRLLTKLYKRLGEF  828 (831)
T ss_dssp             HHHHHHHHHHHTTEEC-CCB---T-TEEEEECC-TTCCHHHHHHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHHHCCcEE-Eec---C-CEEEEECC-CCCCHHHHHHHHHHHHHHHHHh
Confidence            3456778888888643 322   2 58999864 4567889999999999887653

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=80.87  E-value=12  Score=34.42  Aligned_cols=68  Identities=7%  Similarity=-0.026  Sum_probs=43.1

Q ss_pred             CeEEEeCCCCchhHHHHHH---HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC
Q 037144          175 KLVVYSSDQTHCAFQKAAQ---IVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD  250 (502)
Q Consensus       175 ~~~v~~s~~~H~s~~~aa~---~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id  250 (502)
                      +..|++.........+.++   ..|.   ++..+++|     --|.+++++.+++..++..++-++|-++|....+.+.
T Consensus        33 Ga~Vvi~~~~~~~~~~~~~~l~~~g~---~~~~~~~D-----v~~~~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~  103 (255)
T 4g81_D           33 GARVILNDIRATLLAESVDTLTRKGY---DAHGVAFD-----VTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMV  103 (255)
T ss_dssp             TCEEEECCSCHHHHHHHHHHHHHTTC---CEEECCCC-----TTCHHHHHHHHHHHHHTTCCCCEEEECCCCCCCCCGG
T ss_pred             CCEEEEEECCHHHHHHHHHHHHhcCC---cEEEEEee-----CCCHHHHHHHHHHHHHHCCCCcEEEECCCCCCCCChh
Confidence            4445555444333444333   3355   88888887     3488999999988776654555777788876666553

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	502
d1js3a_	476	c.67.1.6 (A:) DOPA decarboxylase {Pig (Sus scrofa)	1e-132
d1pmma_	450	c.67.1.6 (A:) Glutamate decarboxylase beta, GadB {	4e-48
d3bc8a1	445	c.67.1.9 (A:23-467) Selenocysteinyl-tRNA synthase	3e-27
d2z67a1	434	c.67.1.9 (A:1-434) Selenocysteinyl-tRNA synthase (	2e-24
d2v1pa1	467	c.67.1.2 (A:5-471) Tryptophan indol-lyase (tryptop	9e-07

>d1js3a_ c.67.1.6 (A:) DOPA decarboxylase {Pig (Sus scrofa) [TaxId: 9823]} Length = 476

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: DOPA decarboxylase
species: Pig (Sus scrofa) [TaxId: 9823]

 Score =  389 bits (1001), Expect = e-132
 Identities = 201/510 (39%), Positives = 280/510 (54%), Gaps = 48/510 (9%)

Query: 1   MDQAYAQEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETIL 60
           M+   A +FRR+G   VD+MA+Y + I+   V   V+PGYL+  +P +AP  P++ E IL
Sbjct: 1   MN---ASDFRRRGKEMVDYMADYLEGIEGRQVYPDVQPGYLRPLIPATAPQEPDTFEDIL 57

Query: 61  QDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENI 120
           QDV++ I+PG+THW SP +FAYFP  SS   ++ +ML      +G  W +SPA  ELE +
Sbjct: 58  QDVEKIIMPGVTHWHSPYFFAYFPTASSYPAMLADMLCGAIGCIGFSWAASPACTELETV 117

Query: 121 VMDWLGQMLDLPKSFLFSGNG--GGVIQGTTCEALLCTLTAARDRVLKKIGREN------ 172
           +MDWLG+ML LP++FL    G  GGVIQG+  EA L  L AAR +V++++   +      
Sbjct: 118 MMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQG 177

Query: 173 --ISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEA 230
             + KLV Y+SDQ H + ++A  I G+  K I          + + A ++   +  D  A
Sbjct: 178 AVLEKLVAYASDQAHSSVERAGLIGGVKLKAIP-----SDGKFAMRASALQEALERDKAA 232

Query: 231 ELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE 290
            LIP F+ AT+GTT+  + D L  +  +  +  IW+HVDAAYAGSA ICPEFRH ++GVE
Sbjct: 233 GLIPFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVE 292

Query: 291 CVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDW 350
             DSF+FNPHKWL    DC  +WVK  + L      +P YLK+             Y+ W
Sbjct: 293 FADSFNFNPHKWLLVNFDCSAMWVKRRTDLTGAFKLDPVYLKHSHQGS---GLITDYRHW 349

Query: 351 QITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLV 410
           Q+ L RRFRSLK+W V R +GV  L+ +IR HV ++  FE  V  D RFEV       LV
Sbjct: 350 QLPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQDPRFEVCAEVTLGLV 409

Query: 411 CFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGG 470
           CFR+  S                           +  N  LLE IN + K+ +    + G
Sbjct: 410 CFRLKGS---------------------------DGLNEALLERINSARKIHLVPCRLRG 442

Query: 471 IYVLRFAAGNSMTMESHVRAAWTVVQEHLE 500
            +VLRFA  +      HVR AW  ++    
Sbjct: 443 QFVLRFAICSRKVESGHVRLAWEHIRGLAA 472

>d1pmma_ c.67.1.6 (A:) Glutamate decarboxylase beta, GadB {Escherichia coli [TaxId: 562]} Length = 450

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: Glutamate decarboxylase beta, GadB
species: Escherichia coli [TaxId: 562]

 Score =  170 bits (430), Expect = 4e-48
 Identities = 69/503 (13%), Positives = 133/503 (26%), Gaps = 77/503 (15%)

Query: 16  FVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQEHIVPGITHWQ 75
             D  +E   +         +      KR P       +    I+ D  E  + G     
Sbjct: 4   VTDLRSELLDSRFGAKS---ISTIAESKRFPLHEM-RDDVAFQIIND--ELYLDGNARQ- 56

Query: 76  SPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSF 135
                A F   +     V +++    N   +D    P +  ++   ++ +  +   P   
Sbjct: 57  ---NLATF-CQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAP- 111

Query: 136 LFSGNGGGVIQGTTCEALLCTLTAARDRVLKKI-GRENISKLVVYSSDQTHCAFQKAAQI 194
             +G   G     + EA +    A + R  K++      +             + K A+ 
Sbjct: 112 -KNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGPVQICWHKFARY 170

Query: 195 VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKP 254
             ++ + I            +  + ++   + +       + +  T G T     +  +P
Sbjct: 171 WDVELREIPMRPGQ----LFMDPKRMIEACDEN------TIGVVPTFGVTYTGNYEFPQP 220

Query: 255 LCDV------AKQFGIWVHVDAAYAGS-ACICPEFRHFIDGVECVDSFSFNPHKWLFTTL 307
           L D            I +H+DAA  G  A        +   +  V S S + HK+    L
Sbjct: 221 LHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPL 280

Query: 308 DCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVI 367
            C  +  +D   L   L  N  YL                  + I   R    +      
Sbjct: 281 GCGWVIWRDEEALPQELVFNVDYL------------GGQIGTFAINFSRPAGQVIAQYYE 328

Query: 368 RN-FGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNF----SLVCFRVTPSAVMDK 422
               G         +   +A      +     +E             VCF++        
Sbjct: 329 FLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGE---- 384

Query: 423 LRTKYKNGTYDQYRQFSEEERTNEFNRELLES-INVSGKVFMTHAIVGGIYVLRFAAGNS 481
                                  + +  L      V        A    I V+R      
Sbjct: 385 ----------------DPGYTLYDLSERLRLRGWQVPAFTLGGEAT--DIVVMRIMCRRG 426

Query: 482 MTME------SHVRAAWTVVQEH 498
             M+         +A+   + +H
Sbjct: 427 FEMDFAELLLEDYKASLKYLSDH 449

>d3bc8a1 c.67.1.9 (A:23-467) Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mus musculus) [TaxId: 10090]} Length = 445

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  111 bits (278), Expect = 3e-27
 Identities = 38/337 (11%), Positives = 90/337 (26%), Gaps = 40/337 (11%)

Query: 42  KKRLPESAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGF 101
           + + PE   +   ++E  L ++            S N+            +   +++   
Sbjct: 16  QGKCPED-GWDESTLELFLHELAVM--------DSNNFLGNCGVGEREGRVASALVARRH 66

Query: 102 NVVG-------------LDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGT 148
                                 S    ++ N ++  + ++  +            V+   
Sbjct: 67  YRFIHGIGRSGDISAVQPKAAGSSLLNKITNSLVLNVIKLAGVHSV-----ASCFVVPMA 121

Query: 149 TCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTT 208
           T  +L       R +              +        +  K+    G +   I  +   
Sbjct: 122 TGMSLTLCFLTLRHK--------RPKAKYIIWPRIDQKSCFKSMVTAGFEPVVIENVLEG 173

Query: 209 KSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHV 268
                 L  ++V ++I       ++   L +T    A    D L+ L  +   + I   V
Sbjct: 174 DELRTDL--KAVEAKIQELGPEHIL--CLHSTTACFAPRVPDRLEELAVICANYDIPHVV 229

Query: 269 DAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNP 328
           + AY   +  C         V  +D+F  +  K     +    +   +   +       P
Sbjct: 230 NNAYGLQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNEPFIQDISKMYP 289

Query: 329 QY-LKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLW 364
                + + D       +G   ++  L  R       
Sbjct: 290 GRASASPSLDVLITLLSLGCSGYRKLLKERKEMFVYL 326

>d2z67a1 c.67.1.9 (A:1-434) Selenocysteinyl-tRNA synthase (SepSecS) {Methanococcus maripaludis [TaxId: 39152]} Length = 434

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Methanococcus maripaludis [TaxId: 39152]

 Score =  103 bits (257), Expect = 2e-24
 Identities = 56/506 (11%), Positives = 139/506 (27%), Gaps = 100/506 (19%)

Query: 7   QEFRRQGHMFVDFMAEYYKNIDKYPV--RSQVEPGYLKKRLPESAPYSPESVETILQDVQ 64
           +   ++G + ++   +  +++  +     + ++   +K  L   +    +     ++  +
Sbjct: 12  KNMEKRGELVLNEYLKEIEDVFNHRKIPENGIDDEKIKLFLKFLSMMDTDKDPKSVRIGE 71

Query: 65  ---EHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIV 121
                         S        + +     + +               +     L N +
Sbjct: 72  REARTYSKIHEELSSGFCHGIGRSGN-----LVDPQPKASG--------ASIMYALTNKI 118

Query: 122 MDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSS 181
           ++   + L L    + +    G        ++   L+AAR +    +         V   
Sbjct: 119 LESFFKQLGLNVHAIATPISTG-------MSISLCLSAARKKYGSNV---------VIYP 162

Query: 182 DQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATV 241
             +H +  KA   VG++ + +  +         +  E + + I  ++E    P  + +T+
Sbjct: 163 YASHKSPIKAVSFVGMNMRLVETVLDGDR--VYVPVEDIENAIKKEIELGNRP-CVLSTL 219

Query: 242 GTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHK 301
                   D +  +  + + + I   ++ AYA       E          VD+   +  K
Sbjct: 220 TFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKA-FKYRVDAVVSSSDK 278

Query: 302 WLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSL 361
            L T +    ++  D   +     + P                                +
Sbjct: 279 NLLTPIGGGLVYSTDAEFIKEISLSYPGRA------------------------SATPVV 314

Query: 362 KLWVVIRNFGVANLRNFIRSHVGMAKLFERL---VTSDKRFEVAFPRNFSLVCFRVT--P 416
              V + + G  N    +++     KL + L   ++     +     +    C  V   P
Sbjct: 315 NTLVSLLSMGSKNYLELVKNQKNSKKLLDELLNDLSKKTGGKFLDVESPIASCISVNSDP 374

Query: 417 SAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRF 476
             +  KL                                 V+G   +      G   L  
Sbjct: 375 VEIAAKLYNL-----------------------------RVTGPRGIKKTDHFGNCYLGT 405

Query: 477 AAGNSMTMESHVRAAWTVVQEHLEAF 502
              + +     + AA  V  E +   
Sbjct: 406 YTHDYIV----MNAAIGVRTEDIVNS 427

>d2v1pa1 c.67.1.2 (A:5-471) Tryptophan indol-lyase (tryptophanase) {Escherichia coli [TaxId: 562]} Length = 467

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Escherichia coli [TaxId: 562]

 Score = 48.8 bits (115), Expect = 9e-07
 Identities = 40/297 (13%), Positives = 80/297 (26%), Gaps = 37/297 (12%)

Query: 43  KRLPESAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYFPA--------TSSVAGIVG 94
           K LPE  P+    +E + +  + +    I      N F    +        T S  G V 
Sbjct: 1   KHLPE--PFRIRVIEPVKRTTRAYREEAIIK-SGMNPFL-LDSEDVFIDLLTDSGTGAVT 56

Query: 95  EMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCE-AL 153
           + + +        +  S +   L   V +  G    +P             QG   E   
Sbjct: 57  QSMQAAMMRGDEAFSGSRSYYALAESVKNIFGYQYTIP-----------THQGRGAEQIY 105

Query: 154 LCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSY 213
           +  L   R++       + ++    +       +      +  +  K             
Sbjct: 106 IPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKG 165

Query: 214 GLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP--LKPLCDVAKQFGIWVHVDAA 271
               E +   I       +  +    T  +     V    LK +  +AK++ I V +D+A
Sbjct: 166 NFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSA 225

Query: 272 YAGSACICPEFRHF-----------IDGVECVDSFSFNPHKWLFTTLDCCCLWVKDP 317
                    + R              +  +  D  + +  K     +        D 
Sbjct: 226 RFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDAMVPMGGLLCMKDDS 282

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	502
d1js3a_	476	DOPA decarboxylase {Pig (Sus scrofa) [TaxId: 9823]	100.0
d1pmma_	450	Glutamate decarboxylase beta, GadB {Escherichia co	100.0
d3bc8a1	445	Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mu	100.0
d2z67a1	434	Selenocysteinyl-tRNA synthase (SepSecS) {Methanoco	100.0
d1jf9a_	405	NifS-like protein/selenocysteine lyase {Escherichi	99.97
d1elua_	381	Cystine C-S lyase C-des {Synechocystis sp. [TaxId:	99.97
d1t3ia_	408	Probable cysteine desulfurase SufS {Synechocystis	99.97
d2e7ja1	364	Selenocysteinyl-tRNA synthase (SepSecS) {Archaeogl	99.96
d1p3wa_	391	Cysteine desulfurase IscS {Escherichia coli [TaxId	99.96
d1qz9a_	404	Kynureninase {Pseudomonas fluorescens [TaxId: 294]	99.94
d1h0ca_	388	Alanine-glyoxylate aminotransferase {Human (Homo s	99.94
d1eg5a_	376	NifS-like protein/selenocysteine lyase {Thermotoga	99.93
d1fc4a_	401	2-amino-3-ketobutyrate CoA ligase {Escherichia col	99.91
d1vjoa_	377	Alanine-glyoxylate aminotransferase {Cyanobacteria	99.91
d1m32a_	361	2-aminoethylphosphonate transaminase {Salmonella t	99.91
d1j32a_	388	Aspartate aminotransferase, AAT {Phormidium lapide	99.9
d1v72a1	345	Phenylserine aldolase PSALD {Pseudomonas putida [T	99.9
d2bwna1	396	5-aminolevulinate synthase {Rhodobacter capsulatus	99.9
d2bkwa1	382	Alanine-glyoxylate aminotransferase {Baker's yeast	99.89
d2ch1a1	388	3-hydroxykynurenine transaminase {Malaria mosquito	99.89
d1bs0a_	383	PLP-dependent acyl-CoA synthase (8-amino-7-oxonano	99.89
d1c4ka2	462	Ornithine decarboxylase major domain {Lactobacillu	99.88
d1b5pa_	382	Aspartate aminotransferase, AAT {Thermus thermophi	99.88
d1gdea_	388	Aromatic aminoacid aminotransferase, AroAT {Archae	99.88
d1m7ya_	431	1-aminocyclopropane-1-carboxylate synthase (ACC sy	99.86
d1iaya_	428	1-aminocyclopropane-1-carboxylate synthase (ACC sy	99.86
d1iuga_	348	Subgroup IV putative aspartate aminotransferase {T	99.86
d1bw0a_	412	Tyrosine aminotransferase (TAT) {Trypanosoma cruzi	99.86
d1xi9a_	395	Putative alanine aminotransferase {Pyrococcus furi	99.85
d1d2fa_	361	Modulator in mal gene expression, MalY {Escherichi	99.85
d1svva_	340	Low-specificity threonine aldolase {Leishmania maj	99.84
d1wyua1	437	Glycine dehydrogenase (decarboxylating) subunit 1	99.84
d1m6sa_	343	Low-specificity threonine aldolase {Thermotoga mar	99.84
d1c7na_	394	Cystalysin {Treponema denticola [TaxId: 158]}	99.83
d1v2da_	368	Glutamine aminotransferase {Thermus thermophilus [	99.82
d1o4sa_	375	Aspartate aminotransferase, AAT {Thermotoga mariti	99.82
d1vp4a_	420	Putative aminotransferase TM1131 {Thermotoga marit	99.82
d1wyub1	471	Glycine dehydrogenase subunit 2 (P-protein) {Therm	99.8
d1lc5a_	355	L-threonine-O-3-phosphate decarboxylase CobD {Salm	99.8
d1wsta1	403	Multiple substrate aminotransferase, MSAT {Thermoc	99.8
d1mdoa_	376	Aminotransferase ArnB {Salmonella typhimurium [Tax	99.8
d2gb3a1	389	AAT homologue TM1698 {Thermotoga maritima [TaxId:	99.79
d2c0ra1	361	Phosphoserine aminotransferase, PSAT {Bacillus cir	99.78
d1bjna_	360	Phosphoserine aminotransferase, PSAT {Escherichia	99.77
d1b9ha_	384	3-amino-5-hydroxybenzoic acid synthase (AHBA synth	99.77
d2r5ea1	418	Kynurenine--oxoglutarate transaminase I {Yellowfev	99.77
d1u08a_	382	Putative methionine aminotransferase YdbL {Escheri	99.76
d1c7ga_	456	Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 5	99.75
d1w7la_	418	Kynurenine--oxoglutarate transaminase I {Human (Ho	99.74
d2v1pa1	467	Tryptophan indol-lyase (tryptophanase) {Escherichi	99.74
d1fg7a_	354	Histidinol-phosphate aminotransferase HisC {Escher	99.73
d2aeua1	366	Hypothetical protein MJ0158 {Archaeon Methanococcu	99.72
d1ax4a_	465	Tryptophan indol-lyase (tryptophanase) {Proteus vu	99.7
d1kl1a_	405	Serine hydroxymethyltransferase {Bacillus stearoth	99.69
d2f8ja1	334	Histidinol-phosphate aminotransferase HisC {Thermo	99.69
d1y4ia1	397	Methionine gamma-lyase, MGL {Citrobacter freundii	99.67
d1w23a_	360	Phosphoserine aminotransferase, PSAT {Bacillus alc	99.66
d1dfoa_	416	Serine hydroxymethyltransferase {Escherichia coli	99.66
d1gc0a_	392	Methionine gamma-lyase, MGL {Pseudomonas putida [T	99.66
d7aata_	401	Aspartate aminotransferase, AAT {Chicken (Gallus g	99.65
d2fnua1	371	Spore coat polysaccharide biosynthesis protein C {	99.63
d1rv3a_	470	Serine hydroxymethyltransferase {Rabbit (Oryctolag	99.63
d2a7va1	463	Serine hydroxymethyltransferase {Human (Homo sapie	99.6
d1ajsa_	412	Aspartate aminotransferase, AAT {Pig (Sus scrofa),	99.6
d1cs1a_	384	Cystathionine gamma-synthase, CGS {Escherichia col	99.6
d2q7wa1	396	Aspartate aminotransferase, AAT {Escherichia coli	99.59
d1yaaa_	412	Aspartate aminotransferase, AAT {Baker's yeast (Sa	99.59
d2ay1a_	394	Aromatic aminoacid aminotransferase, AroAT {Paraco	99.59
d1ibja_	380	Cystathionine beta-lyase, CBL {Thale cress (Arabid	99.57
d1qgna_	398	Cystathionine gamma-synthase, CGS {Common tobacco	99.56
d3tata_	397	Aromatic aminoacid aminotransferase, AroAT {Escher	99.53
d1e5ea_	394	Methionine gamma-lyase, MGL {Trichomonas vaginalis	99.5
d2ctza1	421	O-acetyl-L-homoserine sulfhydrylase {Thermus therm	99.5
d1pffa_	331	Methionine gamma-lyase, MGL {Trichomonas vaginalis	99.49
d1cl1a_	391	Cystathionine beta-lyase, CBL {Escherichia coli [T	99.47
d2byla1	404	Ornithine aminotransferase {Human (Homo sapiens) [	99.45
d1o69a_	374	Aminotransferase homolog WlaK (PglE, Cj1121c) {Cam	99.43
d1n8pa_	393	Cystathionine gamma-lyase (CYS3) {Baker's yeast (S	99.41
d1vefa1	387	Acetylornithine/acetyl-lysine aminotransferase Arg	99.39
d2hoxa1	425	Alliinase {Garlic (Allium sativum) [TaxId: 4682]}	99.37
d1sffa_	425	4-aminobutyrate aminotransferase, GABA-aminotransf	99.37
d2gsaa_	427	Glutamate-1-semialdehyde aminomutase (aminotransfe	99.34
d1z7da1	404	Ornithine aminotransferase {Plasmodium yoelii yoel	99.32
d1s0aa_	429	Adenosylmethionine-8-amino-7-oxononanoate aminotra	99.26
d1zoda1	431	Dialkylglycine decarboxylase {Pseudomonas cepacia	99.24
d1ohwa_	461	4-aminobutyrate aminotransferase, GABA-aminotransf	99.18

>d1js3a_ c.67.1.6 (A:) DOPA decarboxylase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: DOPA decarboxylase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=100.00  E-value=1.8e-88  Score=702.07  Aligned_cols=463  Identities=43%  Similarity=0.829  Sum_probs=424.2

Q ss_pred             cCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHhhcCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCcccccC
Q 037144            4 AYAQEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYF   83 (502)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~   83 (502)
                      ||+|+||+.+++++|++.||+++++++||.|.++|+++++.++..+|++|.+.+++++++.+.+.++.++|+||+|+||+
T Consensus         1 m~~~~fr~~~~~~~d~i~d~~~~~~~~~v~~~~~p~~l~~~~~~~~P~~g~~~~~~l~~~~~~i~~~~~~~~~P~f~~~~   80 (476)
T d1js3a_           1 MNASDFRRRGKEMVDYMADYLEGIEGRQVYPDVQPGYLRPLIPATAPQEPDTFEDILQDVEKIIMPGVTHWHSPYFFAYF   80 (476)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTGGGSCSSCCCCTTCSGGGSCSSCCSSCCCHHHHHHHHHHTTGGGCCCTTSTTBCSSS
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCChHHHHHhcCcccCcCCCCHHHHHHHHHHHHhCCCCCCCCCCeeEeC
Confidence            79999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCc--CCCCcEEEcCCchHHHHHHHHHHH
Q 037144           84 PATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLF--SGNGGGVIQGTTCEALLCTLTAAR  161 (502)
Q Consensus        84 ~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~--~~~~~g~~t~ggt~a~~~al~~a~  161 (502)
                      ++++++++++++++...+|+|...|..+|.++++|+++++|+++++|+|+++.+  .+.++|++|+|||+||++|+++||
T Consensus        81 ~~~~~~~~~l~~~~~~~~n~n~~~~~~sp~~t~iE~~v~~wl~~l~g~p~~~~~~~~~~~~G~~~~Ggs~anl~al~~AR  160 (476)
T d1js3a_          81 PTASSYPAMLADMLCGAIGCIGFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAAR  160 (476)
T ss_dssp             CCCCCHHHHHHHHHHHHHCCCCSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHhhcccccchhhhhhHHHHHHHHHHHHHHHhCCCcccccCCCCCCCceECCcHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999987543  345689999999999999999999


Q ss_pred             HHHHHHhCcc--C------CCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCc
Q 037144          162 DRVLKKIGRE--N------ISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELI  233 (502)
Q Consensus       162 ~~~~~~~~~~--~------~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~  233 (502)
                      ++.+++....  +      .+++++|+|+.+|||+.|++.++|+   .++.||+|+  +|+||+++|+++|++++++|..
T Consensus       161 ~~~~~~~~~~~~g~~~~~~~~~~vv~~s~~~H~Si~ka~~~lGl---~~~~v~~d~--~~~md~~~L~~~i~~~~~~g~~  235 (476)
T d1js3a_         161 TKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGV---KLKAIPSDG--KFAMRASALQEALERDKAAGLI  235 (476)
T ss_dssp             HHHHHHHHHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHTC---EEEEECCCT--TSCCCHHHHHHHHHHHHHTTCE
T ss_pred             HHHHHhhcccccCcccccccCceEEEecccccHHHHHHHHhcCc---eEEEeccCC--CCCcCHHHHHHHHHHHHhcCCC
Confidence            9876542111  1      2578999999999999999999999   799999975  6799999999999999999999


Q ss_pred             cEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEE
Q 037144          234 PLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLW  313 (502)
Q Consensus       234 p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~  313 (502)
                      |++||+|+|||.+|++|||++|+++|++||+|+||||||||++.+++++++++.++++|||+++|+|||+++|++||+++
T Consensus       236 p~~VvataGtt~~G~iDpl~~I~~i~~~~~~wlHVDAA~Gg~~~~~~~~~~~~~gi~~aDSit~d~HK~l~~P~~~g~~l  315 (476)
T d1js3a_         236 PFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNFDCSAMW  315 (476)
T ss_dssp             EEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSCCSSCEEEE
T ss_pred             cEEEeecCCCccceeeccHHHHHHHHHhcCcEEEEecccchhhhhhcchhhhhcCCcccceeeecCccccccCCcceeec
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHH
Q 037144          314 VKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLV  393 (502)
Q Consensus       314 ~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l  393 (502)
                      +|++..+...+...+.|+......   ....+++.++++++||+++++++|++++.+|.+|+++++++..+++++|.+.|
T Consensus       316 ~r~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~sr~~~al~lw~~l~~~G~~g~~~~i~~~~~lA~~l~~~l  392 (476)
T d1js3a_         316 VKRRTDLTGAFKLDPVYLKHSHQG---SGLITDYRHWQLPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFV  392 (476)
T ss_dssp             ESCHHHHHGGGC---------------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccchHHHHHHHhcChhhhcccccc---ccccccccccccccchhhHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHH
Confidence            999988877887778887654432   33456888999999999999999999999999999999999999999999999


Q ss_pred             hcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEE
Q 037144          394 TSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYV  473 (502)
Q Consensus       394 ~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~  473 (502)
                      ++.|+|+++.+|.+++|||++.+.                           +.+|+++.+++.++|.++++++.++|+.+
T Consensus       393 ~~~~~fel~~~p~l~iV~Fr~~~~---------------------------d~~n~~l~~~l~~~G~~~~s~t~~~g~~~  445 (476)
T d1js3a_         393 LQDPRFEVCAEVTLGLVCFRLKGS---------------------------DGLNEALLERINSARKIHLVPCRLRGQFV  445 (476)
T ss_dssp             HHCTTEEECSCCCSSEEEEEESSC---------------------------HHHHHHHHHHHHHHTSCBCEEEEETTEEE
T ss_pred             hcCCCeEEECCCceEEEEEEccCC---------------------------hHHHHHHHHHHHhcCCEEEeeeeECCEEE
Confidence            999999999999999999999764                           66788999999999999999999999999


Q ss_pred             EEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          474 LRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       474 lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      ||++++|++|+++||+.+++.|++++++
T Consensus       446 lR~~i~n~~Tt~~did~~~~~i~~~a~~  473 (476)
T d1js3a_         446 LRFAICSRKVESGHVRLAWEHIRGLAAE  473 (476)
T ss_dssp             EEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999876

>d1pmma_ c.67.1.6 (A:) Glutamate decarboxylase beta, GadB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: Glutamate decarboxylase beta, GadB
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.9e-54  Score=443.07  Aligned_cols=400  Identities=15%  Similarity=0.154  Sum_probs=319.6

Q ss_pred             CCCCCCCCHHHHHHHHHHhhc-CCCCCCCCCcccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHH
Q 037144           48 SAPYSPESVETILQDVQEHIV-PGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLG  126 (502)
Q Consensus        48 ~~p~~~~~~~~il~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~  126 (502)
                      .+|++|.+.+++.+.+.+.+. ++..++   ++..|+.+  .++..+.+++...+|.|...+..+|.++++|.++++|++
T Consensus        29 ~~p~~~~~~~~~~~~i~d~l~~dg~~~~---n~asf~~t--~~~~~~~~l~~~~~~~N~~~~~~~P~~~~lE~~~v~~la  103 (450)
T d1pmma_          29 RFPLHEMRDDVAFQIINDELYLDGNARQ---NLATFCQT--WDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVA  103 (450)
T ss_dssp             SCCCSCCCHHHHHHHHHHHGGGSCCGGG---BCSCCSCC--CCCHHHHHHHHHTTTCBTTCTTTSHHHHHHHHHHHHHHH
T ss_pred             cCCccCCCHHHHHHHHHHHhccCCCccc---cccccccC--CCCHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHH
Confidence            589999999999999987653 432222   23334332  334567899999999999999999999999999999999


Q ss_pred             HhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccC-CCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEE
Q 037144          127 QMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGREN-ISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAI  205 (502)
Q Consensus       127 ~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~-~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v  205 (502)
                      +|+|+|..+  .+.+.|++|+|||+||++|++++|+++.++....+ .....++++..+|+||.|+|+++|+   .++.|
T Consensus       104 ~L~~~p~~~--~~~~~G~~t~GgSeA~~~a~~aar~~~~~~~~~~g~~~~~~~~~~~~~H~s~~Kaa~~~gi---~~~~v  178 (450)
T d1pmma_         104 DLWHAPAPK--NGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGPVQICWHKFARYWDV---ELREI  178 (450)
T ss_dssp             HHTTCCCCT--TSCCSEEEESSHHHHHHHHHHHHHHHHHHHHHHHTCCCSCCEEEESSCCHHHHHHHHHTTC---EEEEC
T ss_pred             HHhCCCccc--cCCCcCeeeCchHHHHHHHHHHHHHHHHHHhhhcCCCCCCceEEecccHHHHHHHHHHcCC---CceEe
Confidence            999998643  12346999999999999999999998765532222 1334566788899999999999999   99999


Q ss_pred             ecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHH------HhCCEEEeecccccccccC
Q 037144          206 KTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAK------QFGIWVHVDAAYAGSACIC  279 (502)
Q Consensus       206 ~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~------~~g~~lhVDaA~g~~~~~~  279 (502)
                      |++++ +|+||+++|+++++++      +++|++++|+|.+|.+||+++|+++|+      ++|+|+|||||+||+.+++
T Consensus       179 ~~~~~-~~~~d~~~L~~~i~~~------t~~Vv~t~gtt~tG~~dpv~~i~~i~~~~~~a~~~~i~lHVDAA~gG~~~p~  251 (450)
T d1pmma_         179 PMRPG-QLFMDPKRMIEACDEN------TIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPF  251 (450)
T ss_dssp             CCBTT-BCSCCHHHHHHHCCTT------EEEEECBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHH
T ss_pred             eecCC-CCcCcHHHHHHHhhhC------ceEEEeeeeeccCCCccccchhhHHHHHHHHHhccCcEEEeehhhccceeee
Confidence            99863 5899999999998765      469999999999999999999999864      4799999999999987643


Q ss_pred             -ccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCC
Q 037144          280 -PEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRF  358 (502)
Q Consensus       280 -~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~  358 (502)
                       +.......+++++||+++|+|||+++|++||++++|++..+...+...+.|+...            +.++++++||++
T Consensus       252 ~~~~~~~~~~~~~aDSi~~s~HK~~~~p~g~g~l~~r~~~~~~~~~~~~~~yl~~~------------~~~~~~~~sr~~  319 (450)
T d1pmma_         252 VAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQ------------IGTFAINFSRPA  319 (450)
T ss_dssp             HCTTCCCSTTSTTEEEEEEETTTTTCCCSSCEEEEESSGGGSCGGGCEEEEETTEE------------EEECCSCCSCBS
T ss_pred             echhhhhhhcccceeEeecChhhccCCCCCeeEEEecChhhhhhhcccccCcCCCC------------cCCCcccCccch
Confidence             4445556788999999999999999999999999999987766666667777532            235688999986


Q ss_pred             C-chHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC----CCeeEEEEEeecCcchhhhhhcccCCCcc
Q 037144          359 R-SLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP----RNFSLVCFRVTPSAVMDKLRTKYKNGTYD  433 (502)
Q Consensus       359 ~-al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~----~~~~~v~f~~~~~~~~~~~~~~~~~~~~~  433 (502)
                      . ++++|+.++.+|.+|+++++++..+++++|.+.|++.++|+++.+    +.+++|||++.+....             
T Consensus       320 ~~~~~~~~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~~~el~~~~~p~~~l~~V~Fr~~~~~~~-------------  386 (450)
T d1pmma_         320 GQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDP-------------  386 (450)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCEEEEEECCTTTBSSEEEEEECTTCCC-------------
T ss_pred             HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeCCCCCCceEEEEEecCCcccC-------------
Confidence            5 568999999999999999999999999999999999999999853    4578899999764210             


Q ss_pred             cccccchhHhhHHHHHHHHHHHHhcCcEEEEee---eECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          434 QYRQFSEEERTNEFNRELLESINVSGKVFMTHA---IVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       434 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~---~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                             ..  +  ...+.++|.++|..+.+++   ...+..++|++++ .+++++++|++++.|+++.+.
T Consensus       387 -------~~--~--~~~l~~~L~~~Gw~v~~~~~p~~~~~~~~lRvvv~-~~~t~e~~d~lv~dl~~~v~~  445 (450)
T d1pmma_         387 -------GY--T--LYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCR-RGFEMDFAELLLEDYKASLKY  445 (450)
T ss_dssp             -------SS--C--HHHHHHHHHTTTCBCCEEECCTTCTTCEEEEEECC-TTCCHHHHHHHHHHHHHHHHH
T ss_pred             -------CC--C--HHHHHHHHHHcCCeeeccCcCCCcCCcEEEEEEcc-CCCCHHHHHHHHHHHHHHHHH
Confidence                   00  1  1245677778897543332   2345679999986 557788999999999998765

>d3bc8a1 c.67.1.9 (A:23-467) Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.4e-36  Score=312.71  Aligned_cols=384  Identities=10%  Similarity=0.027  Sum_probs=259.7

Q ss_pred             CCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCcccccCCCCCCHHHHHHHHHHhhcCCCCcc-------------cccChh
Q 037144           47 ESAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLD-------------WISSPA  113 (502)
Q Consensus        47 ~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~-------------~~~~p~  113 (502)
                      ..+|++|.+.++|++.+.+...-+.     +.|.++...+.......++++...+......             ...++.
T Consensus        17 ~~lP~~G~~~~~i~~~l~~~~~~d~-----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (445)
T d3bc8a1          17 GKCPEDGWDESTLELFLHELAVMDS-----NNFLGNCGVGEREGRVASALVARRHYRFIHGIGRSGDISAVQPKAAGSSL   91 (445)
T ss_dssp             CCCCSSCCCHHHHHHHHHHHHHTBG-----GGCTTCCCCSSCCCCCSCHHHHHHTTTCCSCBCC-------CCSBHHHHH
T ss_pred             CCCCcCCCCHHHHHHHHHHHHhccC-----CcccCcccccccCccccHHHHHHHHHhhccccccCcchhhhhhhhccchH
Confidence            4689999999999998887643322     2333333222111111223333322221111             122345


Q ss_pred             hHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHH
Q 037144          114 AVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQ  193 (502)
Q Consensus       114 ~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~  193 (502)
                      ...+|.+++.|+++++|++...      .|++|+|||+++++++..++...       ..++++|++|..+|+|+.+++.
T Consensus        92 ~~~le~~~~~~~~~l~g~~~~~------~~~~~~~~t~~~~~~~l~a~~~~-------~~~~~~vi~~~~~H~s~~~a~~  158 (445)
T d3bc8a1          92 LNKITNSLVLNVIKLAGVHSVA------SCFVVPMATGMSLTLCFLTLRHK-------RPKAKYIIWPRIDQKSCFKSMV  158 (445)
T ss_dssp             HHHHHHHHHHHHHHHHTCTTCC------EEEEESSCHHHHHHHHHHHHHHH-------CTTCCEEEEECCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCccc------CccccccchHHHHHHHHHHHHHh-------CCCCCEEEEcCcccHHHHHHHH
Confidence            6789999999999999998753      78999999976666555544322       1256789999999999999999


Q ss_pred             HcCCCCCCEEEEecCC-CCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccc
Q 037144          194 IVGIDRKNIRAIKTTK-SSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAY  272 (502)
Q Consensus       194 ~~Glg~~~v~~v~~~~-~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~  272 (502)
                      ++|+   ..+.|+... ++++.||+++|+++|++....  .+.+|++++|++.+|.+||+++|+++|++||+|+|||+||
T Consensus       159 ~~g~---~~~~v~~~~~~~~~~id~~~l~~~i~~~~~~--~~~~v~~~~~~~~~G~~~~~~~i~~~~~~~~~~l~vD~a~  233 (445)
T d3bc8a1         159 TAGF---EPVVIENVLEGDELRTDLKAVEAKIQELGPE--HILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAY  233 (445)
T ss_dssp             HTTC---EEEEECCEEETTEEECCHHHHHHHHHHHCGG--GEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTT
T ss_pred             HcCC---eeEEEEeeccCcccccCHHHHHHHHHhcccc--CeEEEEEeCCCCCCeeehhHHHHHHHHHHhCCcEEEEccc
Confidence            9999   777775422 246899999999999886543  2678999999999999999999999999999999999999


Q ss_pred             ccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccc
Q 037144          273 AGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQI  352 (502)
Q Consensus       273 g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~  352 (502)
                      |++..++........++.++|++++++||++++|.++|++++++...+....   ..|...                   
T Consensus       234 ~~~~~~~~~~~~~~~~~~~vd~~~~s~hK~~~~p~g~~~l~~~~~~~~~~~~---~~~~~~-------------------  291 (445)
T d3bc8a1         234 GLQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNEPFIQDIS---KMYPGR-------------------  291 (445)
T ss_dssp             TTTCHHHHHHHHHHHHHSCCCEEEEEHHHHHSCCSSCEEEEESCHHHHHHHH---HHSCSC-------------------
T ss_pred             hhhhhhccccchhccCcCCcceEEecCccccccCCCCceeeeCChHHHHHHH---HHHhhc-------------------
Confidence            9887766544443344568999999999999999999999999876543211   111111                   


Q ss_pred             cCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEecCCCeeE-EEEEeecCcchhhhhhccc
Q 037144          353 TLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK---RFEVAFPRNFSL-VCFRVTPSAVMDKLRTKYK  428 (502)
Q Consensus       353 ~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~---~~~l~~~~~~~~-v~f~~~~~~~~~~~~~~~~  428 (502)
                        ......+.+|.++..+|.+++.+..++...+++++.+.|+++.   +..++..+.... .++.+.....         
T Consensus       292 --~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~L~~l~~~~~~~~l~~~~~~~~~~~~l~~~~~---------  360 (445)
T d3bc8a1         292 --ASASPSLDVLITLLSLGCSGYRKLLKERKEMFVYLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTIDG---------  360 (445)
T ss_dssp             --BCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCTTCSSEEEEECTTTSS---------
T ss_pred             --ccCcchHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHHhhcCceeecCCCCCcceEEEeeeccc---------
Confidence              1122457899999999999999999999999999999887642   455554333322 2232221110         


Q ss_pred             CCCcccccccchhHhhHHHHHHHHHHHHhcCc---EEEEee--------eE---------CCEEEEEEEecCCCCcHHHH
Q 037144          429 NGTYDQYRQFSEEERTNEFNRELLESINVSGK---VFMTHA--------IV---------GGIYVLRFAAGNSMTMESHV  488 (502)
Q Consensus       429 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~---~~~~~~--------~~---------~g~~~lR~~~~~~~t~~~di  488 (502)
                                .......++.    ..|.+.|.   -+..+.        .+         ....++|++.+ ..++++||
T Consensus       361 ----------~~~~~~~~l~----~~L~~~gI~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~i~i~~~-~~~T~eDI  425 (445)
T d3bc8a1         361 ----------HHDKAVTQLG----SMLFTRQVSGARAVPLGNVQTVSGHTFRGFMSHADNYPCAYLNAAAA-IGMKMQDV  425 (445)
T ss_dssp             ----------SSSCHHHHHH----HHHHHTTCCSCEEECSCCEEEETTEEEETTTTTSSCCSSCEEEEECC-TTCCHHHH
T ss_pred             ----------cCCCCHHHHH----HHHHHcCCCcceeeccccccchhhhhhhhcCCCCccCCCCeEEEeCc-CCCCHHHH
Confidence                      0111223333    33433332   111110        00         01246898864 66788899


Q ss_pred             HHHHHHHHHHHHh
Q 037144          489 RAAWTVVQEHLEA  501 (502)
Q Consensus       489 ~~~~~~l~~~~~~  501 (502)
                      |++++.|+++.++
T Consensus       426 D~~v~~L~kilk~  438 (445)
T d3bc8a1         426 DLFIKRLDKCLNI  438 (445)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999998875

>d2z67a1 c.67.1.9 (A:1-434) Selenocysteinyl-tRNA synthase (SepSecS) {Methanococcus maripaludis [TaxId: 39152]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Methanococcus maripaludis [TaxId: 39152]

Probab=100.00  E-value=1.6e-35  Score=303.74  Aligned_cols=404  Identities=14%  Similarity=0.091  Sum_probs=281.6

Q ss_pred             CccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHhhcCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCcccc
Q 037144            2 DQAYAQEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQEHIVPGITHWQSPNYFA   81 (502)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~   81 (502)
                      +.|=++++++.++.+++...+.++++-+.                ..+|++|.+.+++.+.+.+....+...|......|
T Consensus         7 ~~~ip~~~~~~~~~~~~~~~~~~~~l~~~----------------~~lP~~g~~~~~i~~~l~~l~~~~~~~~~~~~~~g   70 (434)
T d2z67a1           7 EGLIPKNMEKRGELVLNEYLKEIEDVFNH----------------RKIPENGIDDEKIKLFLKFLSMMDTDKDPKSVRIG   70 (434)
T ss_dssp             CSSSCHHHHHHHHHHHHHHTHHHHHHHHH----------------CSCCSSCCCHHHHHHHHHHHHTTBGGGCTTCEECS
T ss_pred             hccCCccHHHHHHHHHHHHHHHHHHHHhc----------------ccCCCCCCCHHHHHHHHHHHHhcCccccccccccc
Confidence            45677899999999999888877665431                24688899999999999887655555555444444


Q ss_pred             cCCCCCCHHHHHHHHHHh---hcCCC--Cccc----ccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHH
Q 037144           82 YFPATSSVAGIVGEMLSS---GFNVV--GLDW----ISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEA  152 (502)
Q Consensus        82 ~~~~~~~~~~~~~~~l~~---~~n~~--~~~~----~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a  152 (502)
                      ...... ++..+......   .....  ...+    ..+.....+|.++..|+++++|.+..       +..+.+|++++
T Consensus        71 ~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~-------~~~~~~~t~~~  142 (434)
T d2z67a1          71 EREART-YSKIHEELSSGFCHGIGRSGNLVDPQPKASGASIMYALTNKILESFFKQLGLNVH-------AIATPISTGMS  142 (434)
T ss_dssp             SCCCCC-SCHHHHHHTTTCTTCBSBTTBTTSCCTTBHHHHHHHHHHHHHHHHHHHHTTCCCE-------EEEESSCHHHH
T ss_pred             ceeccc-chhHHhhcccccccccccccchhhhhhhhhhhHHHHHHHHHHHHHHHHhcCCCcc-------eeecCcHHHHH
Confidence            332221 12223222111   11111  1111    12235578899999999999999864       34444555556


Q ss_pred             HHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCC-CCCcccCHHHHHHHHHHHHhcC
Q 037144          153 LLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTK-SSSYGLSAESVLSQINLDVEAE  231 (502)
Q Consensus       153 ~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~-~~~~~~d~~~Le~~i~~~~~~g  231 (502)
                      +..++.+.|...         ++.+|++|...|+|+.+++.++|+   .++.|++.. ++++.+|+++|+++|+++...+
T Consensus       143 ~~~~l~a~r~~~---------~~~~vi~s~~~H~s~~k~~~~~g~---~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~~  210 (434)
T d2z67a1         143 ISLCLSAARKKY---------GSNVVIYPYASHKSPIKAVSFVGM---NMRLVETVLDGDRVYVPVEDIENAIKKEIELG  210 (434)
T ss_dssp             HHHHHHHHHHHH---------CCCEEEEECCCCHHHHHHHHHTTC---EEEEECCEEETTEEECCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHhh---------cCceEEEeccCCHHHHHHHHHhCC---cceEEEeecCCCccCCCHHHHHHHHHhhhhcC
Confidence            655666555432         577899999999999999999999   777776421 2367999999999999987766


Q ss_pred             CccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceE
Q 037144          232 LIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCC  311 (502)
Q Consensus       232 ~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~  311 (502)
                      ..+ +|+++.+++..|.++||++|+++|++||+|+|||+|||++...++...... +..++|++++++||++++|.|+|+
T Consensus       211 ~~~-~v~~~~~~~~~g~~~~l~~i~~~~~~~~~~l~vD~a~g~~~~~~~~~~~~~-~~~~~D~~~~s~hK~l~~~~g~~~  288 (434)
T d2z67a1         211 NRP-CVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKA-FKYRVDAVVSSSDKNLLTPIGGGL  288 (434)
T ss_dssp             CCE-EEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHH-HTSCCSEEEEEHHHHHCCCSSCEE
T ss_pred             Cce-EEEeccCcCCCccccCHHHHHHHHHHhCCeEEEeccchhhhhhcccccccc-ccCCcceEEEcCccccccCCCccc
Confidence            544 799999999999999999999999999999999999988765544332222 234899999999999999999999


Q ss_pred             EEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHH
Q 037144          312 LWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFER  391 (502)
Q Consensus       312 ~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~  391 (502)
                      ++++++..+...- ..  +..                     ++....+..+|+++..+|.+|+.++.++..++++++++
T Consensus       289 ~~~~~~~~~~~~~-~~--~~~---------------------~~~~~~~~~~~a~l~~~~~~g~~~~~~~~~~~a~~l~~  344 (434)
T d2z67a1         289 VYSTDAEFIKEIS-LS--YPG---------------------RASATPVVNTLVSLLSMGSKNYLELVKNQKNSKKLLDE  344 (434)
T ss_dssp             EEESCHHHHHHHH-TT--SCS---------------------CBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccCcHHHHHHHH-hh--ccc---------------------ccccchHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHH
Confidence            9999876654321 11  110                     11223567889999999999999999999999999999


Q ss_pred             HHhcC---CCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcE---EEEe
Q 037144          392 LVTSD---KRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKV---FMTH  465 (502)
Q Consensus       392 ~l~~~---~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~---~~~~  465 (502)
                      .|+++   .++.++..+....+++.....                              ..++...|.+.|..   +..+
T Consensus       345 ~L~~l~~~~g~~ll~~~~~~~~~~~~~~~------------------------------~~~l~~~L~~~gI~g~~v~~~  394 (434)
T d2z67a1         345 LLNDLSKKTGGKFLDVESPIASCISVNSD------------------------------PVEIAAKLYNLRVTGPRGIKK  394 (434)
T ss_dssp             HHHHHHHHSSCCBCCCCCSSEEEEECSSC------------------------------HHHHHHHHHHTTEESCEEECT
T ss_pred             HHHHhhhhcCceecCCCCCceeeeecCCC------------------------------HHHHHHHHHHcCCeeeehhhh
Confidence            98764   366666555555555554322                              22445555555642   2221


Q ss_pred             ee--------ECCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144          466 AI--------VGGIYVLRFAAGNSMTMESHVRAAWTVVQEH  498 (502)
Q Consensus       466 ~~--------~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~  498 (502)
                      ..        .....++|++++ ..+|+||||+++++|+++
T Consensus       395 l~~~g~~~~~~~~~~~l~~~~s-~~~T~edID~~i~~L~kI  434 (434)
T d2z67a1         395 TDHFGNCYLGTYTHDYIVMNAA-IGVRTEDIVNSVSKLEKI  434 (434)
T ss_dssp             TCHHHHTCSSCCSCCEEEEECC-TTCCHHHHHHHHHHHHTC
T ss_pred             ccccCeeeecccCCCeEEEecC-CCCCHHHHHHHHHHHhcC
Confidence            11        112468999875 667888999999999864

>d1jf9a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=2e-29  Score=255.51  Aligned_cols=356  Identities=14%  Similarity=0.089  Sum_probs=244.5

Q ss_pred             cccccCCCCCCHHHHHHHHHHhhc-----CCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHH
Q 037144           78 NYFAYFPATSSVAGIVGEMLSSGF-----NVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEA  152 (502)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~l~~~~-----n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a  152 (502)
                      -||++..+++.+..++ +.+..++     |++...+..+..+.+.-+++++.+++++|..+..      ..+|++++|++
T Consensus        24 iYld~a~~~~~p~~v~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~e~~R~~ia~~l~~~~~~------~i~~~~~~T~~   96 (405)
T d1jf9a_          24 AYLDSAASAQKPSQVI-DAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSAE------ELVFVRGTTEG   96 (405)
T ss_dssp             EECCTTTCCCCCHHHH-HHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTTCSCGG------GEEEESSHHHH
T ss_pred             EEEeCccccCCCHHHH-HHHHHHHHhccCCCccchhHHHHHHHHHHHHHHHHHHHHcCCCCcc------cccccCcHHHH
Confidence            4788776665555444 3333322     3332233333344556668899999999975432      68999999999


Q ss_pred             HHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh----HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHH
Q 037144          153 LLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA----FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDV  228 (502)
Q Consensus       153 ~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s----~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~  228 (502)
                      +...+........       .+++.|+++...|+|    |.+.++..|+   +++.+|+++  ++.+|++.+++++++++
T Consensus        97 ~~~~~~~~~~~~~-------~~g~~il~~~~e~~s~~~~~~~~a~~~g~---~v~~~~~~~--~g~~~~~~~~~~i~~~t  164 (405)
T d1jf9a_          97 INLVANSWGNSNV-------RAGDNIIISQMEHHANIVPWQMLCARVGA---ELRVIPLNP--DGTLQLETLPTLFDEKT  164 (405)
T ss_dssp             HHHHHHHHHHHHC-------CTTCEEEEETTCCGGGTHHHHHHHHHHTC---EEEEECBCT--TSCBCGGGHHHHCCTTE
T ss_pred             HHHHHhccccccc-------CCCCEEEEEeCcccchHHHHHHHHHHcCc---EEEEECCCC--CCcCCHHHHHHhccCCc
Confidence            8766654332211       167889999999987    5566677899   999999986  46999999999887765


Q ss_pred             hcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc
Q 037144          229 EAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD  308 (502)
Q Consensus       229 ~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~  308 (502)
                      +      +|++++.++.+|.+.|+++|+++|+++|+++|||++++.+.++.+-...      ++|++++++|||+ +|.|
T Consensus       165 ~------lv~~~~v~~~tG~~~pi~~i~~~~~~~g~~~~vD~~q~~g~~~id~~~~------~~D~~~~s~hK~~-Gp~G  231 (405)
T d1jf9a_         165 R------LLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQAL------DCDFYVFSGHKLY-GPTG  231 (405)
T ss_dssp             E------EEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHH------TCSEEEEEGGGTT-SCSS
T ss_pred             E------EEEEecCCCcccccCchHHhhhHHHHcCCeeecccceeccccccchhhc------CCceeeccccccc-cCCC
Confidence            4      8999999999999999999999999999999999999999887653222      8999999999996 6999


Q ss_pred             ceEEEeeCchhhhhhhcCCcccccCccCC---CCCcccccCCCcccccCCCC-C-CchHHHHHHHHhcHHHHHHHHHHHH
Q 037144          309 CCCLWVKDPSCLLSTLSTNPQYLKNEATD---QEPKEQEVGYKDWQITLCRR-F-RSLKLWVVIRNFGVANLRNFIRSHV  383 (502)
Q Consensus       309 ~g~~~~r~~~~l~~~~~~~~~yl~~~~~~---~~~~~~~~~~~~~~~~~sr~-~-~al~~~~~l~~~g~~g~~~~~~~~~  383 (502)
                      +|++++++... ..    ..+........   .......+......++.+.+ . ..+++..+++.+...|++.+.++..
T Consensus       232 ~g~l~v~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~  306 (405)
T d1jf9a_         232 IGILYVKEALL-QE----MPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQ  306 (405)
T ss_dssp             CEEEEECHHHH-TT----CCCSSCSSSSEEECCTTTCCEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred             ceeeeechhhh-cc----cCcccccccccCccccccccccccchhhhcCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHH
Confidence            99999976532 11    11111110000   00000000111112222222 1 2246666777766678888889999


Q ss_pred             HHHHHHHHHHhcCCCeEEecC-CCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEE
Q 037144          384 GMAKLFERLVTSDKRFEVAFP-RNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVF  462 (502)
Q Consensus       384 ~la~~l~~~l~~~~~~~l~~~-~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~  462 (502)
                      .+++++.+.++..+...+..+ ...++++|.++...                             ...+.+.|.+.|+. 
T Consensus       307 ~L~~~~~~~l~~~~~~~~~~~~~r~~ivsf~~~~~~-----------------------------~~~~~~~L~~~gI~-  356 (405)
T d1jf9a_         307 NLMHYALSQLESVPDLTLYGPQNRLGVIAFNLGKHH-----------------------------AYDVGSFLDNYGIA-  356 (405)
T ss_dssp             HHHHHHHHHHTTSTTEEEESCTTCCSEEEEEETTCC-----------------------------HHHHHHHHHHTTEE-
T ss_pred             HHHHHHHhhhhcCCcccccCCcCcCcEEEEEcCCCC-----------------------------HHHHHHHHHHCCcE-
Confidence            999999999999988877754 34788999885432                             22445556566753 


Q ss_pred             EEeee---------ECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          463 MTHAI---------VGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       463 ~~~~~---------~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      ++.+.         .+..+++|+|++ +.++++|||+++++|+++.+-
T Consensus       357 v~~G~~c~~~~~~~~~~~g~iRiS~~-~ynt~eDid~l~~~l~~i~r~  403 (405)
T d1jf9a_         357 VRTGHHCAMPLMAYYNVPAMCRASLA-MYNTHEEVDRLVTGLQRIHRL  403 (405)
T ss_dssp             CEEECTTCHHHHHHTTCSCEEEEECC-TTCCHHHHHHHHHHHHHHHHH
T ss_pred             EEccchhhhhHHHhcCCCCEEEEECC-CCCCHHHHHHHHHHHHHHHHh
Confidence            33221         122468999986 667888999999999998764

>d1elua_ c.67.1.3 (A:) Cystine C-S lyase C-des {Synechocystis sp. [TaxId: 1143]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystine C-S lyase C-des
species: Synechocystis sp. [TaxId: 1143]

Probab=99.97  E-value=3.7e-30  Score=258.87  Aligned_cols=353  Identities=12%  Similarity=0.088  Sum_probs=233.3

Q ss_pred             cccccCCCCCCHHHHHHHHHHhh----cCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHH
Q 037144           78 NYFAYFPATSSVAGIVGEMLSSG----FNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEAL  153 (502)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~l~~~----~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~  153 (502)
                      .||++-..++.+..+ .+.+...    .+.+...+..+.....+..++++.+++++|.+.+       .++||+|+|+++
T Consensus         9 ~yld~~~~~~~p~~v-~ea~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~-------~i~~~~g~t~a~   80 (381)
T d1elua_           9 TYFNFGGQGILPTVA-LEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETFNVDPN-------TITITDNVTTGC   80 (381)
T ss_dssp             EECCTTTCCCCCHHH-HHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHTTSCGG-------GEEEESSHHHHH
T ss_pred             EEeeCCcccCCCHHH-HHHHHHHHHHhhcCCCccchhhHHHHHHHHHHHHHHHHHhCCCcc-------cEEEECChHHHh
Confidence            477776555554443 3343333    3333334445555667777889999999999765       689999999998


Q ss_pred             HHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHH----HHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHh
Q 037144          154 LCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQK----AAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVE  229 (502)
Q Consensus       154 ~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~----aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~  229 (502)
                      .+++.+.+..          +++.|+++...|+++..    .++..|+   .++.+|.+.......+.+.++++++++  
T Consensus        81 ~~~~~~l~~~----------~g~~i~~~~~~~~s~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~~~~~l~~~i~~~--  145 (381)
T d1elua_          81 DIVLWGLDWH----------QGDEILLTDCEHPGIIAIVQAIAARFGI---TYRFFPVAATLNQGDAAAVLANHLGPK--  145 (381)
T ss_dssp             HHHHHHSCCC----------TTCEEEEETTCCHHHHHHHHHHHHHHCC---EEEEECCGGGSSSSCHHHHHHTTCCTT--
T ss_pred             hhcchhhhhc----------CCceEEEeccccceeeeccccccccccc---cccccccccccccchHHHHHHhhhccc--
Confidence            7776654221          67788889999987554    4555788   999999864321122244454444433  


Q ss_pred             cCCccEEEEEecCCccccccCChhHHHHHHHHh----CCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCC
Q 037144          230 AELIPLFLCATVGTTAITAVDPLKPLCDVAKQF----GIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFT  305 (502)
Q Consensus       230 ~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~----g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~  305 (502)
                          +.+|+++.++|++|.+.|+++|.++|+++    ++++|||++++.+..+.+-..      .++|++++++|||+++
T Consensus       146 ----t~~v~i~~~~n~tG~~~~~~~I~~l~~~~~~~~~~~~~vD~~~~~g~~~~~~~~------~~~D~~~~s~~K~~~~  215 (381)
T d1elua_         146 ----TRLVILSHLLWNTGQVLPLAEIMAVCRRHQGNYPVRVLVDGAQSAGSLPLDFSR------LEVDYYAFTGHKWFAG  215 (381)
T ss_dssp             ----EEEEEEESBCTTTCCBCCHHHHHHHHHHCCSSSCCEEEEECTTTBTTBCCCTTT------SCCSEEEEESSSTTCC
T ss_pred             ----ccccccccccccccccchhhHHHHHHhhcccccccccccccccccccccccccc------cccccccccccccccc
Confidence                45899999999999999999999999984    699999999988776654221      1799999999999999


Q ss_pred             CCcceEEEeeCchhhhhhhcCCcccccCccCC--CCCcccccCCCcccccCCCCC--CchHHHHHHHHhcHHHH-HHHHH
Q 037144          306 TLDCCCLWVKDPSCLLSTLSTNPQYLKNEATD--QEPKEQEVGYKDWQITLCRRF--RSLKLWVVIRNFGVANL-RNFIR  380 (502)
Q Consensus       306 p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~--~~~~~~~~~~~~~~~~~sr~~--~al~~~~~l~~~g~~g~-~~~~~  380 (502)
                      |.|+|++++++....  .+  .+.+.......  ..............+..+.+.  ..+.+.+++..+...|. +.+.+
T Consensus       216 p~G~g~l~~~~~~~~--~~--~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~~~~a~~~~~~~g~~~~~~~  291 (381)
T d1elua_         216 PAGVGGLYIHGDCLG--EI--NPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQ  291 (381)
T ss_dssp             CTTCEEEEECTTTGG--GC--CCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHH
T ss_pred             cchhhHHHhhHHHHH--hc--CcccccccccccccccccccccccccccccccccchhhhhhhhhhhhHHHhcccccchh
Confidence            999999999876431  11  12221110000  000000000000111111111  12345556665555554 45578


Q ss_pred             HHHHHHHHHHHHHhcCCCeEEecC--CCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc
Q 037144          381 SHVGMAKLFERLVTSDKRFEVAFP--RNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS  458 (502)
Q Consensus       381 ~~~~la~~l~~~l~~~~~~~l~~~--~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~  458 (502)
                      +..++++++.+.|+++|+++++.+  +..++++|.+.+...                            .+.+.+.|.++
T Consensus       292 ~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~vsf~~~~~~~----------------------------~~~i~~~L~~~  343 (381)
T d1elua_         292 AICQRSEFLWRGLNQLPHVHCLATSAPQAGLVSFTVDSPLG----------------------------HRAIVQKLEEQ  343 (381)
T ss_dssp             HHHHHHHHHHHHHHHSTTEEESCSSCCSSSEEEEEECSSSC----------------------------HHHHHHHHHHT
T ss_pred             hhhhHHHHHHHHHhcCCCeEecCCCCccccEEEEEcCCCCC----------------------------HHHHHHHHHhC
Confidence            889999999999999999999853  567899998754310                            23566677777


Q ss_pred             CcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144          459 GKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHL  499 (502)
Q Consensus       459 g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~  499 (502)
                      |.. +.  ...+.+++|+|++ +.|+++|||+++++|++++
T Consensus       344 gi~-v~--~~~~~~~lRis~~-~~nt~edid~ll~~l~e~~  380 (381)
T d1elua_         344 RIY-LR--TIADPDCIRACCH-YITDEEEINHLLARLADFG  380 (381)
T ss_dssp             TEE-CE--EETTTTEEEEECC-TTCCHHHHHHHHHHHTTCC
T ss_pred             CcE-EE--ecCCCCEEEEecC-CCCCHHHHHHHHHHHHhhC
Confidence            854 22  2345678999985 6678889999999998753

>d1t3ia_ c.67.1.3 (A:) Probable cysteine desulfurase SufS {Synechocystis sp. PCC 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Probable cysteine desulfurase SufS
species: Synechocystis sp. PCC 6803 [TaxId: 1148]

Probab=99.97  E-value=7.4e-29  Score=251.54  Aligned_cols=357  Identities=13%  Similarity=0.086  Sum_probs=245.5

Q ss_pred             cccccCCCCCCHHHHHHHHHHhhc-----CCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHH
Q 037144           78 NYFAYFPATSSVAGIVGEMLSSGF-----NVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEA  152 (502)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~l~~~~-----n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a  152 (502)
                      -||++..+++.+..++ +.+...+     |++...+..+....++-+++++.+++++|.+...      ..++++++|++
T Consensus        24 iYld~a~~~~~p~~v~-~~~~~~~~~~~~n~~s~~~~~~~~~~~~~e~aR~~ia~llga~~~~------~i~~~~~tt~~   96 (408)
T d1t3ia_          24 VYLDNAATSQKPRAVL-EKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFINARSPR------EIVYTRNATEA   96 (408)
T ss_dssp             EECBTTTCCCCCHHHH-HHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTTCSCGG------GEEEESSHHHH
T ss_pred             EEeeCccccCCCHHHH-HHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCcc------cEEeecchHHH
Confidence            4888887776555544 4333332     2222234444445556667899999999997542      58888998888


Q ss_pred             HHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh----HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHH
Q 037144          153 LLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA----FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDV  228 (502)
Q Consensus       153 ~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s----~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~  228 (502)
                      +...+........       .++..|+++...|.+    +...++..|.   .++.+|.+.  ++..+.+.|++++++++
T Consensus        97 ~n~~~~~~~~~~~-------~~g~~il~s~~e~~s~~~~~~~~~~~~g~---~v~~~~~~~--~~~~~~~~l~~~~~~~t  164 (408)
T d1t3ia_          97 INLVAYSWGMNNL-------KAGDEIITTVMEHHSNLVPWQMVAAKTGA---VLKFVQLDE--QESFDLEHFKTLLSEKT  164 (408)
T ss_dssp             HHHHHHHTHHHHC-------CTTCEEEEETTCCGGGTHHHHHHHHHHCC---EEEEECBCT--TSSBCHHHHHHHCCTTE
T ss_pred             HHHHHhhcccccc-------CCCCEEEeecccchhhhhhhhhhhhccCc---eEeeeeccc--cccccHHHhhhccCCCc
Confidence            7665544322111       156789999999976    4455667799   999999875  45889999999987765


Q ss_pred             hcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc
Q 037144          229 EAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD  308 (502)
Q Consensus       229 ~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~  308 (502)
                      +      +|++++.++.+|.+.|+++|+++|+++|+++||||+++.+..+.+-.. .     ++|++++++|||+ +|.|
T Consensus       165 ~------lv~i~~~~~~tG~~~p~~~i~~~~~~~g~~~ivDa~q~~g~~~id~~~-~-----~~D~~~~s~hK~~-gp~G  231 (408)
T d1t3ia_         165 K------LVTVVHISNTLGCVNPAEEIAQLAHQAGAKVLVDACQSAPHYPLDVQL-I-----DCDWLVASGHKMC-APTG  231 (408)
T ss_dssp             E------EEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHH-H-----TCSEEEEEGGGTT-SCTT
T ss_pred             e------EEEEecccccccccCcHHHHhhhhhccCceeeeccceecccccccccc-c-----CCceEEecccccc-CCCC
Confidence            4      899999999999999999999999999999999999999988875322 2     8999999999995 6889


Q ss_pred             ceEEEeeCchhhhhhhcCCcccccCccCCCC--CcccccCCCcccccCCCCC--CchHHHHHHHHhcHHHHHHHHHHHHH
Q 037144          309 CCCLWVKDPSCLLSTLSTNPQYLKNEATDQE--PKEQEVGYKDWQITLCRRF--RSLKLWVVIRNFGVANLRNFIRSHVG  384 (502)
Q Consensus       309 ~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~--~~~~~~~~~~~~~~~sr~~--~al~~~~~l~~~g~~g~~~~~~~~~~  384 (502)
                      +|++++++.....     .+++..+......  ............++.+.+.  ..+++-.+++.+...|.+++.++...
T Consensus       232 ~g~l~v~~~~~~~-----~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~  306 (408)
T d1t3ia_         232 IGFLYGKEEILEA-----MPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVE  306 (408)
T ss_dssp             CEEEEECHHHHHH-----SCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred             ccccccchhhhhc-----CCceecCCcccccccccccccCCchhhhcCCcHHHHHHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence            9999998764311     1222221110000  0000000111123333221  12355566666666788888889999


Q ss_pred             HHHHHHHHHhcCCCeEEecCC-----CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcC
Q 037144          385 MAKLFERLVTSDKRFEVAFPR-----NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSG  459 (502)
Q Consensus       385 la~~l~~~l~~~~~~~l~~~~-----~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g  459 (502)
                      +++++.+.+.+.+++.++.+.     ..++++|.+....                             ...+.+.|.+.|
T Consensus       307 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~iv~f~~~~~~-----------------------------~~~v~~~L~~~g  357 (408)
T d1t3ia_         307 LTHYLWQGLGQIPQLRLYGPNPKHGDRAALASFNVAGLH-----------------------------ASDVATMVDQDG  357 (408)
T ss_dssp             HHHHHHHHHHTCTTEEEESCCGGGSCBCSEEEEEETTBC-----------------------------HHHHHHHHHTTT
T ss_pred             HHhHHhhhhccCccccccCCCccccCcceEEEEEeCCCC-----------------------------HHHHHHHHhhCC
Confidence            999999999999999988632     3578999875431                             234566676777


Q ss_pred             cEEEEeee---------ECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHhC
Q 037144          460 KVFMTHAI---------VGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEAF  502 (502)
Q Consensus       460 ~~~~~~~~---------~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~~  502 (502)
                      +. ++.+.         .+..+++|+|+. +.+|++|||+++++|+++.+.|
T Consensus       358 I~-v~~G~~c~~~~~~~~~~~g~vRiS~~-~ynt~~did~li~~L~~~~~~f  407 (408)
T d1t3ia_         358 IA-IRSGHHCTQPLHRLFDASGSARASLY-FYNTKEEIDLFLQSLQATIRFF  407 (408)
T ss_dssp             EE-CBCSCTTCHHHHHHTTCCCCEEEECC-TTCCHHHHHHHHHHHHHHHHHT
T ss_pred             cE-EecCcccccHHHHhhcCCccEEEECC-CCCCHHHHHHHHHHHHHHHHHh
Confidence            53 33211         123468999985 7788889999999999998764

>d2e7ja1 c.67.1.9 (A:8-371) Selenocysteinyl-tRNA synthase (SepSecS) {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.96  E-value=5.5e-27  Score=233.62  Aligned_cols=312  Identities=13%  Similarity=0.107  Sum_probs=205.3

Q ss_pred             HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcC
Q 037144          117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVG  196 (502)
Q Consensus       117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~G  196 (502)
                      +...+.+.+++++|.+         ..++|+|||+||+.++.+..+           ++++|+++..+|+|+..+++..|
T Consensus        48 l~~~~~~~~A~~~g~e---------~~~~t~g~t~a~~~~~~al~~-----------~gd~Vi~~~~~h~s~~~~~~~~g  107 (364)
T d2e7ja1          48 IHDFIHNQLPKFLGCD---------VARVTNGAREAKFAVMHSLAK-----------KDAWVVMDENCHYSSYVAAERAG  107 (364)
T ss_dssp             HHHHHHTHHHHHTTSS---------EEEEESSHHHHHHHHHHHHCC-----------TTCEEEEETTCCHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHhCcC---------EEEEECcHHHHHHHHHHHHhC-----------CCcEEEeecccccccchHHHhcc
Confidence            3444556688899975         378999999999988876643           68899999999999999999999


Q ss_pred             CCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccccccc
Q 037144          197 IDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSA  276 (502)
Q Consensus       197 lg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~  276 (502)
                      +   +++.+|++..+++.+|+++|+++|++.++.. .+.+|++++++|++|.+.|+++|+++|++||+++|+|+||+.+.
T Consensus       108 ~---~v~~v~~~~~~~~~i~~~~l~~~i~~~~k~~-~~~lv~i~~~~n~tG~~~~l~~I~~ia~~~~i~livD~a~~~g~  183 (364)
T d2e7ja1         108 L---NIALVPKTDYPDYAITPENFAQTIEETKKRG-EVVLALITYPDGNYGNLPDVKKIAKVCSEYDVPLLVNGAYAIGR  183 (364)
T ss_dssp             C---EEEEECCCCTTTCCCCHHHHHHHHHHHTTTS-CEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTTBTT
T ss_pred             c---eEEEeeeccccccccCHHHHHhhhhhhcccC-CceEEEeecCCCCCceeecchhheeccccccchhhccccchhhh
Confidence            9   9999999876678999999999999876543 45678889999999999999999999999999999999998877


Q ss_pred             ccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCC
Q 037144          277 CICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCR  356 (502)
Q Consensus       277 ~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr  356 (502)
                      ++.+ ....     ++|++++++||+++.|.++|+++.++... ...+.....|....               .......
T Consensus       184 ~~~~-~~~~-----g~D~~~~S~~K~~~~~g~~g~l~~~~~~~-~~~~~~~~~~~~~~---------------~~~~~~~  241 (364)
T d2e7ja1         184 MPVS-LKEI-----GADFIVGSGHKSMAASGPIGVMGMKEEWA-EIVLRRSEKYKNKE---------------VELLGCT  241 (364)
T ss_dssp             BCCC-HHHH-----TCSEEEEEHHHHSSCCSSCEEEEECTTTT-TTTTCBCSSCTTSB---------------GGGTTCC
T ss_pred             hhhc-cccc-----ccceeeeccccccCCCCCEEEEEECHHHH-HHHHhhccccCccc---------------ccccccc
Confidence            6543 2222     79999999999999998899888875532 21221111221110               0110111


Q ss_pred             CCCchHHH---HHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-CCeeEEEEEeecCcchhhhhhcccCCCc
Q 037144          357 RFRSLKLW---VVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP-RNFSLVCFRVTPSAVMDKLRTKYKNGTY  432 (502)
Q Consensus       357 ~~~al~~~---~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~-~~~~~v~f~~~~~~~~~~~~~~~~~~~~  432 (502)
                       ..+...+   .++... .+.+ +...+..++++++.+.|.++ ++.++.. +....+.|...+.....           
T Consensus       242 -~~~~~~~~~~~~l~~~-~~~~-~~~~~~~~~~~~~~~~l~~~-g~~~~~~~~~~~~~~~~~~~~~~~~-----------  306 (364)
T d2e7ja1         242 -ARGATIITLMASFPHV-RERI-KRWDEEVEKARRFAAEMEKL-GIKQLGDNPHNHDLMFFHAEVLYEI-----------  306 (364)
T ss_dssp             -CCSHHHHHHHHHHHHH-HHHG-GGHHHHHHHHHHHHHHHHHT-TCEEESSSSCCSSEEEEECHHHHHH-----------
T ss_pred             -cchhHHHHHHHHHHHH-HHHH-HHHHHHHHHHHHHHHHHHHc-CCeecCCCCCCcceEEEeccchHHH-----------
Confidence             1122222   222221 1222 22344567788899999988 6777653 22222333332210000           


Q ss_pred             ccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHhC
Q 037144          433 DQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEAF  502 (502)
Q Consensus       433 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~~  502 (502)
                              ..........+...+..+|...+.   .+....+|++  .+.++++||++++++|++++++|
T Consensus       307 --------~~~~~~~~~~~~~~l~~~~~~~~~---~g~~~~~~~~--~~~~t~edid~~~~~l~ei~~~y  363 (364)
T d2e7ja1         307 --------SKKAKGGRFFLYRELKSRKIHGIK---PGLTRYFKLS--TYGLSDEEVDYVLNAFKEIIEKY  363 (364)
T ss_dssp             --------HHHSSSGGGHHHHHHHHTTEECSC---TTCCSEEEEE--CTTCCHHHHHHHHHHHHHHHHHC
T ss_pred             --------HHHhhccchHHHHHHHhcCCceec---CCCcceEEEe--ccCCCHHHHHHHHHHHHHHHHHh
Confidence                    000000011223344445542211   1223456765  35567889999999999999875

>d1p3wa_ c.67.1.3 (A:) Cysteine desulfurase IscS {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cysteine desulfurase IscS
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=3.5e-27  Score=237.80  Aligned_cols=343  Identities=13%  Similarity=0.106  Sum_probs=226.3

Q ss_pred             CcccccCCCCCCHHHHHHHHHHhhcCCC-------CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCc
Q 037144           77 PNYFAYFPATSSVAGIVGEMLSSGFNVV-------GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTT  149 (502)
Q Consensus        77 p~~~~~~~~~~~~~~~~~~~l~~~~n~~-------~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~gg  149 (502)
                      |-||++..+++.++.++ +.+...+...       ...+..+..+.++-.++++.+++++|.+.+       ..+||+|+
T Consensus         3 ~iYlD~aa~~p~~~~v~-ea~~~~~~~~~~~~np~~~~~~~~~~~~~~~~~~R~~iA~~lg~~~~-------~I~~~~~~   74 (391)
T d1p3wa_           3 PIYLDYSATTPVDPRVA-EKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPR-------EIVFTSGA   74 (391)
T ss_dssp             SEECBTTTCCCCCHHHH-HHHHTTTSTTSCCCCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCGG-------GEEEESSH
T ss_pred             eEEeeCccccCCCHHHH-HHHHHHHHhccccCCCchhhhHHHHHHHHHHHHHHHHHHHHcCCCCC-------cEEEECCH
Confidence            67888887777777655 5555554221       112233334455566788999999999875       68999999


Q ss_pred             hHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHH---HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHH
Q 037144          150 CEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAA---QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINL  226 (502)
Q Consensus       150 t~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa---~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~  226 (502)
                      |+++..++.+......+       +++.|++++..|.++....   +..|+   +++.+|.+.  ++.+|+++++++|++
T Consensus        75 t~~l~~~~~~~~~~~~~-------~gd~Vv~~~~~~~s~~~~~~~~~~~G~---~v~~v~~~~--~~~~d~~~~~~~i~~  142 (391)
T d1p3wa_          75 TESDNLAIKGAANFYQK-------KGKHIITSKTEHKAVLDTCRQLEREGF---EVTYLAPQR--NGIIDLKELEAAMRD  142 (391)
T ss_dssp             HHHHHHHHHHHHHHHGG-------GCCEEEEETTSCHHHHHHHHHHHHTTC---EEEEECCCT--TSCCCHHHHHHHCCT
T ss_pred             HHHHHHHHhhhhhhhcC-------CCCEEEEeccccchHHHHHHHHHHcCC---EEEEeCCCC--CCeEcHHHHHHhCCC
Confidence            99987777665543222       5788999999998875544   44588   999999875  468999999999987


Q ss_pred             HHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC
Q 037144          227 DVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT  306 (502)
Q Consensus       227 ~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p  306 (502)
                      +++      +|+++++++++|.+.|+++|+++|+++|++++||++|+.+..+.+-..      ..+|++++++|||+ +|
T Consensus       143 ~T~------lv~is~~~n~tG~~~~~~~I~~~~~~~~~~~ivD~~~~~g~~~~d~~~------~~~D~~~~s~~k~~-g~  209 (391)
T d1p3wa_         143 DTI------LVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKLPIDLSQ------LKVDLMSFSGHKIY-GP  209 (391)
T ss_dssp             TEE------EEECCSBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTBTTBCCCTTT------SCCSEEEEESTTTT-SC
T ss_pred             CcE------EEEEECCCCCCeeECCHHHHHHHhccCCcEEEEeeccccCCccccchh------cccccccccccccc-CC
Confidence            654      899999999999999999999999999999999999988877654321      17999999999996 67


Q ss_pred             CcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCc--hHHHHHHHHhcHHHHHHHHHHHHH
Q 037144          307 LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRS--LKLWVVIRNFGVANLRNFIRSHVG  384 (502)
Q Consensus       307 ~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~a--l~~~~~l~~~g~~g~~~~~~~~~~  384 (502)
                      .++|++++++....    ...+.+......             .....+....+  ..+..++.. ..+...+..++...
T Consensus       210 ~g~g~~~~~~~~~~----~~~~~~~gg~~~-------------~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~  271 (391)
T d1p3wa_         210 KGIGALYVRRKPRV----RIEAQMHGGGHE-------------RGMRSGTLPVHQIVGMGEAYRI-AKEEMATEMERLRG  271 (391)
T ss_dssp             SSCEEEEECBTTBC----CCCCSSCSSCTT-------------TTTSCSCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHH
T ss_pred             CceEEEEEecchhc----ccCCcccCCccc-------------cCcccCcchhhhhhhhhhhhhH-HHHHhhHHHHHHHH
Confidence            78999999765321    111111111100             00111111111  111122222 23445566778888


Q ss_pred             HHHHHHHHHhcCCCeEEecCC---CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH----h
Q 037144          385 MAKLFERLVTSDKRFEVAFPR---NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN----V  457 (502)
Q Consensus       385 la~~l~~~l~~~~~~~l~~~~---~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~----~  457 (502)
                      ++.++.++|.++++..+....   ...++.|......                             ...+...+.    +
T Consensus       272 ~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~l~~i~v~  322 (391)
T d1p3wa_         272 LRNRLWNGIKDIEEVYLNGDLEHGAPNILNVSFNYVE-----------------------------GESLIMALKDLAVS  322 (391)
T ss_dssp             HHHHHHHTTTTSTTEEECSCTTTSCTTEEEEEETTSC-----------------------------HHHHHHHTTTEECB
T ss_pred             HHHHHHHHHHhhcCeeecccccccCceEEEEEeCCCC-----------------------------hHHHHHHhCCCEEE
Confidence            999999999999877764321   2345556554321                             112233332    1


Q ss_pred             cCcEEEEeeeEC--------------CEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          458 SGKVFMTHAIVG--------------GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       458 ~g~~~~~~~~~~--------------g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      .|..+. .....              ..+++|+|++ +.+|++|||+++++|++++++
T Consensus       323 ~G~~c~-~~~~~~~~~l~~~g~~~~~~~g~iRiS~~-~~nt~edid~l~~~l~~~l~~  378 (391)
T d1p3wa_         323 SGSACT-SASLEPSYVLRALGLNDELAHSSIRFSLG-RFTTEEEIDYTIELVRKSIGR  378 (391)
T ss_dssp             CCCC-------CCCHHHHHHTCCHHHHHTEEEEECC-TTCCHHHHHHHHHHHHHHHHH
T ss_pred             cccccc-CCccchhHHHHHcCCCccccCCEEEEecC-CCCCHHHHHHHHHHHHHHHHH
Confidence            222111 11111              1247999985 667788999999999998764

>d1qz9a_ c.67.1.3 (A:) Kynureninase {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Kynureninase
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.94  E-value=1.1e-25  Score=227.70  Aligned_cols=356  Identities=13%  Similarity=0.030  Sum_probs=215.6

Q ss_pred             CcccccCCCCCCHHHHHHHHHHhhc-CCC--C--cccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchH
Q 037144           77 PNYFAYFPATSSVAGIVGEMLSSGF-NVV--G--LDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCE  151 (502)
Q Consensus        77 p~~~~~~~~~~~~~~~~~~~l~~~~-n~~--~--~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~  151 (502)
                      -.||++-..++.+.. +.+.+..++ +.+  .  ..|.. ..+.++.+++++.+++++|++++       +.+||+++|+
T Consensus        28 ~iYLd~as~g~~p~~-v~~a~~~~l~~~~~~~~~~~~~~-~~~~~~~e~~R~~iA~llga~~~-------ei~~~~~~T~   98 (404)
T d1qz9a_          28 VIYLDGNSLGARPVA-ALARAQAVIAEEWGNGLIRSWNS-AGWRDLSERLGNRLATLIGARDG-------EVVVTDTTSI   98 (404)
T ss_dssp             CEECCTTTSCCCBTT-HHHHHHHHHHTCCCCCGGGHHHH-TSGGGHHHHHHHHHHTTTTCCTT-------SEEECSCHHH
T ss_pred             CEEcCCcccccCCHH-HHHHHHHHHHHHhcccCcccccc-hhHHHHHHHHHHHHHHHhCCCCC-------cEEEecCchH
Confidence            357776544444333 344433333 221  1  12222 22345666899999999999876       6899999999


Q ss_pred             HHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcC
Q 037144          152 ALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAE  231 (502)
Q Consensus       152 a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g  231 (502)
                      ++...+..+.......    . ++..+++++..|++........+.   ++..++.+.  ++..+++.++++|+++++  
T Consensus        99 ~~~~~~~~~~~~~~~~----~-~~~~vi~~~~~~~~~~~~~~~~~~---~~~~~~~~~--~~~~~~~~~~~~i~~~T~--  166 (404)
T d1qz9a_          99 NLFKVLSAALRVQATR----S-PERRVIVTETSNFPTDLYIAEGLA---DMLQQGYTL--RLVDSPEELPQAIDQDTA--  166 (404)
T ss_dssp             HHHHHHHHHHHHHHHH----S-TTCCEEEEETTSCHHHHHHHHHHH---HHHCSSCEE--EEESSGGGHHHHCSTTEE--
T ss_pred             HHHHHhhhhhhhhccc----C-CCcEEEEeccccchHHHHHHhhhh---eeeeeceec--cccccchhHHHhcCCCce--
Confidence            9876665443221111    0 344555566666654443333333   233333332  246678889998877664  


Q ss_pred             CccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc-ce
Q 037144          232 LIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD-CC  310 (502)
Q Consensus       232 ~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~-~g  310 (502)
                          +|++++.++.+|.+.|+++|+++|+++|+++|||++++.+....+-...      ++|+++++.|||++.|.+ +|
T Consensus       167 ----lV~i~~v~~~tG~~~pv~~i~~~~~~~~~~~~vD~~q~~g~~~~~~~~~------~~d~~~~s~~K~~~~~~g~~g  236 (404)
T d1qz9a_         167 ----VVMLTHVNYKTGYMHDMQALTALSHECGALAIWDLAHSAGAVPVDLHQA------GADYAIGCTYKYLNGGPGSQA  236 (404)
T ss_dssp             ----EEEEESBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCHHHH------TCSEEEECSSSTTCCCTTCCC
T ss_pred             ----EEEEecccccccceecHHHHhccccccccceeEEeeccccccccccccc------cceEEEEechhhcccCCceEE
Confidence                8999999999999999999999999999999999999998877653322      899999999999976655 56


Q ss_pred             EEEeeCchhhhhhhcCCcccccCccCCCCCccccc--CCCcccccCCC-CC-CchHHHHHHHH---hcHHHHHHHHHHHH
Q 037144          311 CLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEV--GYKDWQITLCR-RF-RSLKLWVVIRN---FGVANLRNFIRSHV  383 (502)
Q Consensus       311 ~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~--~~~~~~~~~sr-~~-~al~~~~~l~~---~g~~g~~~~~~~~~  383 (502)
                      +++.++.. +. ................ ......  .......+.+. .. ....+..+++.   .|.+.+++......
T Consensus       237 ~~~~~~~~-~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  313 (404)
T d1qz9a_         237 FVWVSPQL-CD-LVPQPLSGWFGHSRQF-AMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALT  313 (404)
T ss_dssp             EEEECTTT-TT-TSCCSCCCGGGBCTTS-CCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHH
T ss_pred             EEEechhh-hh-hCCccccccCCccccc-cccccccccccchhhhhhhccchhHHHHHHHHHHHHHhhHHHHHHHHHHhH
Confidence            66655432 21 1111111110000000 000000  00000000110 00 11222233333   35566666666666


Q ss_pred             HHHHHHHHHHhcCCCeEEecCC----CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcC
Q 037144          384 GMAKLFERLVTSDKRFEVAFPR----NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSG  459 (502)
Q Consensus       384 ~la~~l~~~l~~~~~~~l~~~~----~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g  459 (502)
                      .....+.+.+...++++++++.    ..++|+|..+.                               ...+.+.|.++|
T Consensus       314 ~~~~~l~~~~~~~~~~~i~~p~~~~~r~~~vsf~~~~-------------------------------~~~v~~~L~~~g  362 (404)
T d1qz9a_         314 DLFIELVEQRCAAHELTLVTPREHAKRGSHVSFEHPE-------------------------------GYAVIQALIDRG  362 (404)
T ss_dssp             HHHHHHHHHHHTTSCCEECSCSSGGGBCSEEEEECTT-------------------------------HHHHHHHHHTTT
T ss_pred             HHHHHHHHhhccCCCEEEECCCCccceeeEEEEecCC-------------------------------HHHHHHHHHHCC
Confidence            6666677777778899998753    35788887642                               235677788778


Q ss_pred             cEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          460 KVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       460 ~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      ++ +   .....++||+|+++.+||++|||+++++|+++.++
T Consensus       363 i~-~---~~r~~~~lRiS~~h~ynt~~did~~~~~L~~vl~~  400 (404)
T d1qz9a_         363 VI-G---DYREPRIMRFGFTPLYTTFTEVWDAVQILGEILDR  400 (404)
T ss_dssp             EE-C---EEETTTEEEEECCTTTCCHHHHHHHHHHHHHHHHH
T ss_pred             CE-E---eecCCCeEEEECCCCCCCHHHHHHHHHHHHHHHHh
Confidence            53 2   22233589999976568888999999999998864

>d1h0ca_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=8.1e-26  Score=227.36  Aligned_cols=353  Identities=12%  Similarity=0.072  Sum_probs=228.6

Q ss_pred             CcccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHH
Q 037144           77 PNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCT  156 (502)
Q Consensus        77 p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~a  156 (502)
                      |+.+-|.|++...+.-+.+.+.    ....+ .-++.+.++..++.+.+++++|.++..      ..+||+|||+++..+
T Consensus        18 ~~~~l~~pGP~~~~~~Vl~am~----~~~i~-HRs~~f~~i~~ea~~~l~~llg~~~~~------~ii~~gsgT~a~~~~   86 (388)
T d1h0ca_          18 PNQLLLGPGPSNLPPRIMAAGG----LQMIG-SMSKDMYQIMDEIKEGIQYVFQTRNPL------TLVISGSGHCALEAA   86 (388)
T ss_dssp             CCCEECSSSCCCCCHHHHHHHT----CCCCC-TTSHHHHHHHHHHHHHHHHHHTCCCSE------EEEESSCHHHHHHHH
T ss_pred             CcCccccCCCCCCCHHHHHHhC----cCCCC-CCCHHHHHHHHHHHHHHHHHhCCCCCc------EEEEcCcHHHHHHHH
Confidence            4444466655544444433332    21112 246788899999999999999998764      588999999998777


Q ss_pred             HHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH--HHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCcc
Q 037144          157 LTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ--KAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIP  234 (502)
Q Consensus       157 l~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~--~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p  234 (502)
                      +.....           ++..+++....|++..  ..+...+.   .+..++.+.  ....|.+.+++.+....     +
T Consensus        87 i~~l~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~--~~~~~~~~~~~~~~~~~-----~  145 (388)
T d1h0ca_          87 LVNVLE-----------PGDSFLVGANGIWGQRAVDIGERIGA---RVHPMTKDP--GGHYTLQEVEEGLAQHK-----P  145 (388)
T ss_dssp             HHHHCC-----------SSCCEEECBSSHHHHHHHHHHHHHC-----CBCCBCCT--TCCCCHHHHHHHHHHHC-----C
T ss_pred             HHHhhc-----------cCCceeeecccceeeeeccccccccc---cccccccCC--ccccchHHHHHHhccCC-----c
Confidence            665532           4556666667777643  34455676   667777665  34889999988876643     3


Q ss_pred             EEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEe
Q 037144          235 LFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWV  314 (502)
Q Consensus       235 ~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~  314 (502)
                      .+|++++.+|.+|.+.|+++|+++|+++|+++|||++++.+..+.+-...      ++|+++++.|||+++|.+.|++++
T Consensus       146 ~~v~~~~~~n~tG~i~pi~~i~~~~~~~g~~~~vD~~qs~g~~~~d~~~~------~~D~~~~s~~K~~~gp~g~~~~~~  219 (388)
T d1h0ca_         146 VLLFLTHGESSTGVLQPLDGFGELCHRYKCLLLVDSVASLGGTPLYMDRQ------GIDILYSGSQKALNAPPGTSLISF  219 (388)
T ss_dssp             SEEEEESEETTTTEECCCTTHHHHHHTTTCEEEEECTTTTTTSCCCTTTT------TCSEEEEESSSTTCCCTTCEEEEE
T ss_pred             ceEEEeeeeeccccccCHHHHHHHhhcccccceecccccccccccccccc------ccceecccccccccCCCceEEEee
Confidence            48999999999999999999999999999999999999888777643222      899999999999999999999988


Q ss_pred             eCchhhhhhhcC----CcccccCccCCCCCcccccC-CCcccccCCCC-C-CchHHHHHHHHhcHHHHHHHHHHHHHHHH
Q 037144          315 KDPSCLLSTLST----NPQYLKNEATDQEPKEQEVG-YKDWQITLCRR-F-RSLKLWVVIRNFGVANLRNFIRSHVGMAK  387 (502)
Q Consensus       315 r~~~~l~~~~~~----~~~yl~~~~~~~~~~~~~~~-~~~~~~~~sr~-~-~al~~~~~l~~~g~~g~~~~~~~~~~la~  387 (502)
                      ++... ......    ...|+......     .... ........+.. . ....+..++..+...|+..+.++..++++
T Consensus       220 ~~~~~-~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~t~~~~~~~~~~~al~~~~~~g~~~~~~~~~~l~~  293 (388)
T d1h0ca_         220 SDKAK-KKMYSRKTKPFSFYLDIKWLA-----NFWGCDDQPRMYHHTIPVISLYSLRESLALIAEQGLENSWRQHREAAA  293 (388)
T ss_dssp             CHHHH-HHHTTCSSCCSCSTTCHHHHH-----HHTTCSSSCCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred             cHHHH-Hhhhhccccccccccccchhh-----hhhhhccccccccccccHHHHHHHHHHHHHHHHhccccccccccchhH
Confidence            76532 111111    11111100000     0000 00000001111 1 11244455666666778888899999999


Q ss_pred             HHHHHHhcCCCeEEecC-C--C-eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEE
Q 037144          388 LFERLVTSDKRFEVAFP-R--N-FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFM  463 (502)
Q Consensus       388 ~l~~~l~~~~~~~l~~~-~--~-~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~  463 (502)
                      ++++.+.+. ++.++.+ +  . .++++|.++.. .+                           ..++.+.|.++..+.+
T Consensus       294 ~l~~~~~~~-g~~~~~~~~~~rs~~i~~~~~p~~-~~---------------------------~~~~~~~L~~~~gI~v  344 (388)
T d1h0ca_         294 YLHGRLQAL-GLQLFVKDPALRLPTVTTVAVPAG-YD---------------------------WRDIVSYVIDHFDIEI  344 (388)
T ss_dssp             HHHHHHHHH-TCCBSSCSGGGBCTTEEEEECCTT-CC---------------------------HHHHHHHHHHHHCEEC
T ss_pred             HHHHHHhhc-CcccccCCHHHcCCeEEEEECCCC-CC---------------------------HHHHHHHHHhcCCEEE
Confidence            999999887 5555432 2  1 34678877432 10                           2345555555433333


Q ss_pred             EeeeE-CCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHhC
Q 037144          464 THAIV-GGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEAF  502 (502)
Q Consensus       464 ~~~~~-~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~~  502 (502)
                      ..+.. ....++|++.+++.++++|||+++++|+++.+++
T Consensus       345 ~~G~~~~~~~~iRis~~g~~~t~edid~li~aL~~~L~~l  384 (388)
T d1h0ca_         345 MGGLGPSTGKVLRIGLLGCNATRENVDRVTEALRAALQHC  384 (388)
T ss_dssp             EECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHS
T ss_pred             eCCchhhcCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHh
Confidence            33221 1234799995456778889999999999998764

>d1eg5a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.93  E-value=7.6e-24  Score=211.98  Aligned_cols=341  Identities=12%  Similarity=0.069  Sum_probs=217.5

Q ss_pred             ccccCCCCCCHHHHHHHHHHhhc-CCCC---cccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHH
Q 037144           79 YFAYFPATSSVAGIVGEMLSSGF-NVVG---LDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALL  154 (502)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~l~~~~-n~~~---~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~  154 (502)
                      ||++..+++.++.++. .+...+ +...   ..+..+..+.++-.++++.+++++|++++       +.+|++|+|+++.
T Consensus         4 yld~a~~~~~p~~v~e-a~~~~~~~~~~np~~~~~~~~~~~~~~~~aR~~ia~l~~~~~~-------~i~~~~~~T~~l~   75 (376)
T d1eg5a_           4 YFDNNATTRVDDRVLE-EMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLGVSPS-------EIFFTSCATESIN   75 (376)
T ss_dssp             ECBTTTCCCCCHHHHH-HHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTSCGG-------GEEEESCHHHHHH
T ss_pred             EEECcccccCCHHHHH-HHHHHHHHcCCCCccccHHHHHHHHHHHHHHHHHHHHcCCCCC-------cEEEECCHHHHHH
Confidence            6777655565555554 443333 2211   12223334455555788999999999875       6899999999987


Q ss_pred             HHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH---HHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcC
Q 037144          155 CTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ---KAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAE  231 (502)
Q Consensus       155 ~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~---~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g  231 (502)
                      .++........       .++.+++++...|.+..   +.++..|+   +++.||+++  ++++|+++++++|++++   
T Consensus        76 ~~~~~~~~~~~-------~~g~~v~~~~~~~~~~~~~~~~~~~~g~---~v~~vp~~~--~~~id~~~l~~~i~~~t---  140 (376)
T d1eg5a_          76 WILKTVAETFE-------KRKRTIITTPIEHKAVLETMKYLSMKGF---KVKYVPVDS--RGVVKLEELEKLVDEDT---  140 (376)
T ss_dssp             HHHHHHHHHTT-------TTCCEEEECTTSCHHHHHHHHHHHHTTC---EEEECCBCT--TSCBCHHHHHHHCCTTE---
T ss_pred             hhhhccccccc-------ccCcccccccccchhhHHHHHHHHhcCC---EEEEEcCCC--CCeECHHHHHHhcCCCc---
Confidence            76654332211       15667777777776644   44455688   999999986  56999999999997765   


Q ss_pred             CccEEEEEecCCccccccCChhHHHHHHHHh--CCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcc
Q 037144          232 LIPLFLCATVGTTAITAVDPLKPLCDVAKQF--GIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDC  309 (502)
Q Consensus       232 ~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~--g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~  309 (502)
                         .+|++++.++.+|.+.|++++.++|+.+  ++.++||++++.+..+.+-...      ++|++++++|||+ +|.|+
T Consensus       141 ---~lv~is~v~~~tG~~~~~~~i~~~~~~~~~~~~~~vD~~q~~g~~~~d~~~~------~~D~~~~s~~K~~-gp~G~  210 (376)
T d1eg5a_         141 ---FLVSIMAANNEVGTIQPVEDVTRIVKKKNKETLVHVDAVQTIGKIPFSLEKL------EVDYASFSAHKFH-GPKGV  210 (376)
T ss_dssp             ---EEEEEESBCTTTCBBCCHHHHHHHHHHHCTTCEEEEECTTTTTTSCCCCTTT------CCSEEEEEGGGGT-SCTTC
T ss_pred             ---eEEEEECCccccceeeeehhhhhhhhhcccCceeEEEeeecccccccccccc------Cccceecccceee-cCCCc
Confidence               4999999999999999999999999776  8999999999998887653221      7999999999995 68999


Q ss_pred             eEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHH
Q 037144          310 CCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKL  388 (502)
Q Consensus       310 g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~  388 (502)
                      |++++++...+      .+.+.......             ....+.. ..+........................+..+
T Consensus       211 ~~l~~~~~~~~------~p~~~g~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (376)
T d1eg5a_         211 GITYIRKGVPI------RPLIHGGGQER-------------GLRSGTQNVPGIVGAARAMEIAVEELSEAAKHMEKLRSK  271 (376)
T ss_dssp             EEEEECTTSCC------CCSBCSSCTTT-------------TTBCSCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             eeEEeccCccc------CCcccCCCCcc-------------cccCCcccchhhhhHHHHhhccccchhhhhhhhhhhhhh
Confidence            99998765321      12221111000             0001111 1111111112222233445566677778888


Q ss_pred             HHHHHhcCCCeEEec--CCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEE--
Q 037144          389 FERLVTSDKRFEVAF--PRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMT--  464 (502)
Q Consensus       389 l~~~l~~~~~~~l~~--~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~--  464 (502)
                      +.+.|.......+..  .....++.+.+....                             ...+...|.+.|+.+-+  
T Consensus       272 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~L~~~gI~vr~G~  322 (376)
T d1eg5a_         272 LVSGLMNLGAHIITPLEISLPNTLSVSFPNIR-----------------------------GSTLQNLLSGYGIYVSTSS  322 (376)
T ss_dssp             HHHHHHTTTCEECSCTTSBCTTEEEEECTTCC-----------------------------HHHHHHHHHHTTEECBC--
T ss_pred             hccccccccccccccccccccceeeeccCCCC-----------------------------HHHHHHHHhhCCeEEeCcc
Confidence            999998874433322  123445666664421                             22344445555643211  


Q ss_pred             ---eeeE--------CC------EEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          465 ---HAIV--------GG------IYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       465 ---~~~~--------~g------~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                         ....        .|      .+++|+|+. ++||++|||+++++|++++.-
T Consensus       323 ~c~~~~~~~~~~l~~~gi~~~~~~~~iRiS~~-~ynt~edid~l~~~L~~iv~~  375 (376)
T d1eg5a_         323 ACTSKDERLRHVLDAMGVDRRIAQGAIRISLC-KYNTEEEVDYFLKKIEEILSF  375 (376)
T ss_dssp             ----------CHHHHTTCCHHHHHHEEEEECC-TTCCHHHHHHHHHHHHHHHHH
T ss_pred             hhcCCccchhHHHHHcCCCcccCCCEEEEecC-CCCCHHHHHHHHHHHHHHHhh
Confidence               1110        01      247999985 667888999999999998763

>d1fc4a_ c.67.1.4 (A:) 2-amino-3-ketobutyrate CoA ligase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 2-amino-3-ketobutyrate CoA ligase
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=7.2e-23  Score=205.90  Aligned_cols=302  Identities=11%  Similarity=0.057  Sum_probs=210.3

Q ss_pred             HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcC
Q 037144          117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVG  196 (502)
Q Consensus       117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~G  196 (502)
                      +..++.+.+++++|.+.         .+++++|++||..++.+...           ++++|++....|.|+..++...+
T Consensus        91 ~~~~lE~~lA~~~g~e~---------al~~~SG~~An~~~i~~l~~-----------~~d~i~~d~~~h~s~~~G~~~~~  150 (401)
T d1fc4a_          91 SHKELEQKLAAFLGMED---------AILYSSCFDANGGLFETLLG-----------AEDAIISDALNHASIIDGVRLCK  150 (401)
T ss_dssp             HHHHHHHHHHHHHTCSE---------EEEESCHHHHHHTTHHHHCC-----------TTCEEEEETTCCHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHhhcCCc---------eEEecchhhhhHHHHHHhcC-----------CCcEEEeCCcchHHHHccccccC
Confidence            33345555788888763         68999999999887765533           67889999999999999999888


Q ss_pred             CCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccccccc
Q 037144          197 IDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSA  276 (502)
Q Consensus       197 lg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~  276 (502)
                      .   ++..++.       .|.+++++++++..+.+....+|++....++.|.+.||++|.++|++||+++++|.||+.+.
T Consensus       151 a---~~~~~~~-------~d~~~le~~~~~~~~~~~~~~liv~egv~s~~G~~~~L~~l~~L~~~~~a~LivDeah~~g~  220 (401)
T d1fc4a_         151 A---KRYRYAN-------NDMQELEARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGF  220 (401)
T ss_dssp             S---EEEEECT-------TCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTEEEEEECTTTTTT
T ss_pred             c---eEEEEcC-------CChHHHHHHHHHhhhcccCceEEEEcCCCCCCCchhhhhHHHHHHhhcCcEEEehhhhcccc
Confidence            8   8887764       48889999888777666666677777777889999999999999999999999999998876


Q ss_pred             ccCcc--chhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccC
Q 037144          277 CICPE--FRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITL  354 (502)
Q Consensus       277 ~~~~~--~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~  354 (502)
                      +-...  ......-...+|.++.++.|.++++.  |.+++.+...........++|++.....                 
T Consensus       221 ~g~~G~G~~~~~~~~~~~dii~~tl~Ka~gg~~--Gg~v~g~~~~~~~l~~~~~~~~~s~~l~-----------------  281 (401)
T d1fc4a_         221 VGENGRGSHEYCDVMGRVDIITGTLGKALGGAS--GGYTAARKEVVEWLRQRSRPYLFSNSLA-----------------  281 (401)
T ss_dssp             SSTTSCCHHHHTTCTTCCSEEEEESSSTTCSSS--CEEEEECHHHHHHHHHHCHHHHHSCCCC-----------------
T ss_pred             ccCCCCccchhccCCCCCeEEEeecccccccCC--cccccCCHHHHHHHHcCChhhhhcCCCC-----------------
Confidence            54311  11112224579999999999996542  3444444443322222334454432110                 


Q ss_pred             CCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCccc
Q 037144          355 CRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQ  434 (502)
Q Consensus       355 sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~  434 (502)
                        +..+.++..+++.+  ....++.++..++.++|++.+... ++.+. ...++++.+.+..                  
T Consensus       282 --p~~~~aa~~~l~~~--~~~~~~~~~l~~~~~~~~~~l~~~-g~~~~-~~~~pIv~v~~~~------------------  337 (401)
T d1fc4a_         282 --PAIVAASIKVLEMV--EAGSELRDRLWANARQFREQMSAA-GFTLA-GADHAIIPVMLGD------------------  337 (401)
T ss_dssp             --HHHHHHHHHHHHHH--HTCHHHHHHHHHHHHHHHHHHHHT-TCCBC-CSSSSEEEEEEEC------------------
T ss_pred             --HHHHHHHHhhhccc--ccCHHHHHHHHHHHHHHHhhhccc-CCccC-CCCCCEEEEEECC------------------
Confidence              00112222333332  234667889999999999999987 66665 3456777665532                  


Q ss_pred             ccccchhHhhHHHHHHHHHHHHhcCcEE---EEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHhC
Q 037144          435 YRQFSEEERTNEFNRELLESINVSGKVF---MTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEAF  502 (502)
Q Consensus       435 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~---~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~~  502 (502)
                                ......+.++|.++|..+   ..|++..+...||++++..+| ++|||+++++|+++.+++
T Consensus       338 ----------~~~a~~~~~~L~~~Gi~v~~i~~PtVp~g~~~lRi~~~a~hT-~edId~~v~al~ev~~~l  397 (401)
T d1fc4a_         338 ----------AVVAQKFARELQKEGIYVTGFFYPVVPKGQARIRTQMSAAHT-PEQITRAVEAFTRIGKQL  397 (401)
T ss_dssp             ----------HHHHHHHHHHHHHTTEECCEECTTSSCTTCEEEEEECCTTCC-HHHHHHHHHHHHHHHHHT
T ss_pred             ----------HHHHHHHHHHHHHCCceEEeECCCCCCCCCceEEEEECCCCC-HHHHHHHHHHHHHHHHHh
Confidence                      233557888888889742   223344667789999875555 559999999999998875

>d1vjoa_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]

Probab=99.91  E-value=7.3e-23  Score=204.52  Aligned_cols=356  Identities=13%  Similarity=0.043  Sum_probs=219.3

Q ss_pred             CCCcccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHH
Q 037144           75 QSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALL  154 (502)
Q Consensus        75 ~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~  154 (502)
                      +-|+-+=+.|++...|.-+.+.+    +....+ .-++.+.++-+++++.+++++|.++..      ..+|++|||+++.
T Consensus        15 ~~p~~~l~~PGP~~v~~~Vl~am----~~~~~~-hr~~ef~~i~~~~r~~l~~ll~~~~~~------~i~~~g~gT~~~~   83 (377)
T d1vjoa_          15 EVPSRLLLGPGPSNAHPSVLQAM----NVSPVG-HLDPAFLALMDEIQSLLRYVWQTENPL------TIAVSGTGTAAME   83 (377)
T ss_dssp             CCCCCEECSSSCCCCCHHHHHHH----SSCCCC-TTSHHHHHHHHHHHHHHHHHHTCCCSC------EEEESSCHHHHHH
T ss_pred             CCCcceeecCCCCCCCHHHHHHh----CcCCCC-CCCHHHHHHHHHHHHHHHHHhCCCCCe------EEEEcCcHHHHHH
Confidence            34544444555555454443433    222111 246788899999999999999998764      5788888999987


Q ss_pred             HHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhH--HHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCC
Q 037144          155 CTLTAARDRVLKKIGRENISKLVVYSSDQTHCAF--QKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAEL  232 (502)
Q Consensus       155 ~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~--~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~  232 (502)
                      .++.....           ++..+++....|.+.  ...+...+.   ....+....+  ...+.+..+....+..    
T Consensus        84 ~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~--~~~~~~~~~~~~~~~~----  143 (377)
T d1vjoa_          84 ATIANAVE-----------PGDVVLIGVAGYFGNRLVDMAGRYGA---DVRTISKPWG--EVFSLEELRTALETHR----  143 (377)
T ss_dssp             HHHHHHCC-----------TTCEEEEEESSHHHHHHHHHHHHTTC---EEEEEECCTT--CCCCHHHHHHHHHHHC----
T ss_pred             HHHHhccc-----------cccccceeeechhhhhhhhhhhhhcc---cccccccCCC--CcccchhhhhhhhcCc----
Confidence            66655432           345555555677653  334455565   6666665543  2556666665554432    


Q ss_pred             ccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEE
Q 037144          233 IPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCL  312 (502)
Q Consensus       233 ~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~  312 (502)
                       +.+|+.++.+|.+|.+.|+++|+++|+++|..+|||++++.+...++-...      ++|+++++.|||+++|.++|++
T Consensus       144 -~~~v~~~~~~~~tg~~~~i~~i~~~~~~~g~~~~vDa~~~~g~~~~~~~~~------~~d~~~~s~~K~~~gp~g~~~~  216 (377)
T d1vjoa_         144 -PAILALVHAETSTGARQPLEGVGELCREFGTLLLVDTVTSLGGVPIFLDAW------GVDLAYSCSQKGLGCSPGASPF  216 (377)
T ss_dssp             -CSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTTTTSCCCTTTT------TCSEEECCSSSTTCSCSSCEEE
T ss_pred             -ceeeeeeeeeccceeeechhhhhhhhhhccceEEEecchhhhhhhhccccc------ccceeeecccccccCCCEEEEe
Confidence             347888999999999999999999999999999999999877766542221      8999999999999999999999


Q ss_pred             EeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCc-hHHHHHHHHhcHHHHHHHHHHHHHHHHHHHH
Q 037144          313 WVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRS-LKLWVVIRNFGVANLRNFIRSHVGMAKLFER  391 (502)
Q Consensus       313 ~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~a-l~~~~~l~~~g~~g~~~~~~~~~~la~~l~~  391 (502)
                      ++++... .........+........  ...............-.... ..+-.++......|...+.++..++++++.+
T Consensus       217 ~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~l~~  293 (377)
T d1vjoa_         217 TMSSRAI-EKLQRRRTKVANWYLDMN--LLGKYWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWE  293 (377)
T ss_dssp             EECHHHH-HHHHTCSSCCSCSTTCHH--HHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred             cchhhHH-hhhhccCCCCcceeeccc--hhhhccCcccccccccceechhhhHHHHhhhhhcCchHHHHHHHHHhhhhhh
Confidence            8876543 211111111110000000  00000000000000000001 1222334445677888899999999999999


Q ss_pred             HHhcCCCeEEecCCC---eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcEEEEeee
Q 037144          392 LVTSDKRFEVAFPRN---FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKVFMTHAI  467 (502)
Q Consensus       392 ~l~~~~~~~l~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~  467 (502)
                      .+.+. ++.++.++.   ..+++|..+. +.+                           ..++.+.|.++ |..+..+..
T Consensus       294 ~l~~~-~~~~~~~~~~rs~~v~~~~~p~-~~~---------------------------~~~l~~~L~~~~gI~v~~G~~  344 (377)
T d1vjoa_         294 RLEDI-GLSLHVEKEYRLPTLTTVCIPD-GVD---------------------------GKAVARRLLNEHNIEVGGGLG  344 (377)
T ss_dssp             HHHHT-TCCBSSCGGGBCSSEEEEECCT-TCC---------------------------HHHHHHHHHHHHCEECEECCG
T ss_pred             hhhcc-CceeecChHhcCCeEEEEECCC-CCC---------------------------HHHHHHHHHhcCCEEEecCcc
Confidence            99886 666654332   3456777642 110                           23455555444 553322211


Q ss_pred             ECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144          468 VGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       468 ~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~  500 (502)
                      ..+..++|++.++++++++|||+++++|+++++
T Consensus       345 ~~~~~~~Ris~~g~~~t~edi~~lv~al~~~l~  377 (377)
T d1vjoa_         345 ELAGKVWRVGLMGFNSRKESVDQLIPALEQVLR  377 (377)
T ss_dssp             GGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHC
T ss_pred             cccCCEEEEecCcCCCCHHHHHHHHHHHHHHhC
Confidence            112357999966677888899999999998764

>d1m32a_ c.67.1.3 (A:) 2-aminoethylphosphonate transaminase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: 2-aminoethylphosphonate transaminase
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.91  E-value=5.8e-24  Score=211.39  Aligned_cols=324  Identities=10%  Similarity=0.070  Sum_probs=198.8

Q ss_pred             hhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh-HHH
Q 037144          112 PAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA-FQK  190 (502)
Q Consensus       112 p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s-~~~  190 (502)
                      +.+.++.+++.+.+++++|.+++.     ...++|+|||+++..++......          ++.+++++...+.+ +..
T Consensus        29 ~~~~~~~~~~r~~l~~l~~~~~~~-----~~i~~t~s~T~~~~~~~~~l~~~----------~~~~~~~~~~~~~~~~~~   93 (361)
T d1m32a_          29 DYNIGVVEQIRQQLTALATASEGY-----TSVLLQGSGSYAVEAVLGSALGP----------QDKVLIVSNGAYGARMVE   93 (361)
T ss_dssp             HHHTTTHHHHHHHHHHHHCSSSSE-----EEEEEESCHHHHHHHHHHHSCCT----------TCCEEEEESSHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCCC-----EEEEECCCHHHHHHHHHHHhhhh----------ccccceeeehhhhhhHHH
Confidence            344556678999999999998652     13678899999987665433221          34455555433333 444


Q ss_pred             HHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeec
Q 037144          191 AAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDA  270 (502)
Q Consensus       191 aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDa  270 (502)
                      .+...+.   ....+......  ..+.+..+.+....    ..+.+|.+++.+|.+|.+.|+++|+++|+++|++++||+
T Consensus        94 ~~~~~~~---~~~~~~~~~~~--~~~~~~~~~~~~~~----~~~~~v~~~~~~~~tG~~~~i~~i~~~~~~~g~~~~vDa  164 (361)
T d1m32a_          94 MAGLMGI---AHHAYDCGEVA--RPDVQAIDAILNAD----PTISHIAMVHSETTTGMLNPIDEVGALAHRYGKTYIVDA  164 (361)
T ss_dssp             HHHHHTC---CEEEEECCTTS--CCCHHHHHHHHHHC----TTCCEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEEC
T ss_pred             Hhhhhhc---ccccccccccC--CccchhhHHHHHhc----cCccceEEEeeecccccchhhhhhhhhhcccceeeEeec
Confidence            5566676   77777665433  33333333222221    124589999999999999999999999999999999999


Q ss_pred             ccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcc
Q 037144          271 AYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDW  350 (502)
Q Consensus       271 A~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~  350 (502)
                      +++.+..+.+-. ..     ++|++++++|||+++|.|.|+++++++....    ..+........... ..........
T Consensus       165 ~qs~G~~~~d~~-~~-----~~D~~~~s~~K~l~gp~G~g~l~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~  233 (361)
T d1m32a_         165 MSSFGGIPMDIA-AL-----HIDYLISSANKCIQGVPGFAFVIAREQKLAA----CKGHSRSLSLDLYA-QWRCMEDNHG  233 (361)
T ss_dssp             TTTTTTSCCCTT-TT-----TCSEEEEESSSTTCCCSSEEEEEEEHHHHTT----CTTCCSCSTTCHHH-HHHHHHHTTT
T ss_pred             ccccCccccccc-cc-----ccceEEeeecccccCCCCceEEEechhhhhh----hccccccccccchh-hhcccccccc
Confidence            999888876532 22     8999999999999999999999998654321    11111100000000 0000000000


Q ss_pred             cccCCCC-CCchHHHHHHHHhcHHH-HHHHHHHHHHHHHHHHHHHhcCCCeEEecCC--Ce-eEEEEEeecCcchhhhhh
Q 037144          351 QITLCRR-FRSLKLWVVIRNFGVAN-LRNFIRSHVGMAKLFERLVTSDKRFEVAFPR--NF-SLVCFRVTPSAVMDKLRT  425 (502)
Q Consensus       351 ~~~~sr~-~~al~~~~~l~~~g~~g-~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~--~~-~~v~f~~~~~~~~~~~~~  425 (502)
                      ....+.. .....+..++..+..++ .....++...+++.+.+.++.. ++.+..++  ++ .+++|..+...       
T Consensus       234 ~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-g~~~~~~~~~rs~~v~~~~~p~~~-------  305 (361)
T d1m32a_         234 KWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRAL-GFNTLLDDELHSPIITAFYSPEDP-------  305 (361)
T ss_dssp             CCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCGGGBCSSEEEEECCCCT-------
T ss_pred             ccCCCCCchhhhHHHHHHHHHHHhcchhhhHHHHHHHHHHHHHHHhhc-CCcccCChhhcCCcEEEEECCCCC-------
Confidence            0000101 11234444555444444 4455567778888899998886 56655443  23 35667654211       


Q ss_pred             cccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144          426 KYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHL  499 (502)
Q Consensus       426 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~  499 (502)
                                         .....++.+.|.++|.+..++ .....+++|++.+++ ++++||++++++|++++
T Consensus       306 -------------------~~~~~~~~~~l~~~gi~i~~G-~~~~~~~~Ris~~g~-~~~~di~~lv~al~~~L  358 (361)
T d1m32a_         306 -------------------QYRFSEFYRRLKEQGFVIYPG-KVSQSDCFRIGNIGE-VYAADITALLTAIRTAM  358 (361)
T ss_dssp             -------------------TCCHHHHHHHHHHTTEECEEC-CCSSSCEEEEECCSS-CCHHHHHHHHHHHHHHC
T ss_pred             -------------------CCCHHHHHHHHHHCCcEEECC-CcCCCCEEEEeCCCC-CCHHHHHHHHHHHHHHc
Confidence                               001345677788888754333 334456899997655 56779999999999864

>d1j32a_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Phormidium lapideum [TaxId: 32060]

Probab=99.90  E-value=1.6e-23  Score=210.43  Aligned_cols=332  Identities=9%  Similarity=0.044  Sum_probs=229.1

Q ss_pred             HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144           90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG  169 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~  169 (502)
                      |..+.+.+...+......|....+..++.+.+.+|+.+.+|.+-..     ...++|+|+++++..++.+..+       
T Consensus        45 p~~v~~a~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~-----~~i~it~G~~~al~~~~~~~~~-------  112 (388)
T d1j32a_          45 PKHIVEAAKAALEQGKTRYGPAAGEPRLREAIAQKLQRDNGLCYGA-----DNILVTNGGKQSIFNLMLAMIE-------  112 (388)
T ss_dssp             CHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCG-----GGEEEESHHHHHHHHHHHHHCC-------
T ss_pred             CHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCC-----ceEEEcCCHHHHHHHHHHHHhC-------
Confidence            4556677776665555567777778889999999999998875331     2689999999998777665533       


Q ss_pred             ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144          170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV  249 (502)
Q Consensus       170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i  249 (502)
                          +++.|+++.+.+..+...++..|.   .++.++.+.++++.+|+++|++++++.+      .+++++.++|+||.+
T Consensus       113 ----~gd~Vlv~~P~y~~~~~~~~~~~~---~~v~~~~~~~~~~~~d~~~l~~~~~~~~------~~~~~~~P~NPTG~~  179 (388)
T d1j32a_         113 ----PGDEVIIPAPFWVSYPEMVKLAEG---TPVILPTTVETQFKVSPEQIRQAITPKT------KLLVFNTPSNPTGMV  179 (388)
T ss_dssp             ----TTCEEEEESSCCTHHHHHHHHTTC---EEEEECCCGGGTTCCCHHHHHHHCCTTE------EEEEEESSCTTTCCC
T ss_pred             ----CCCEEEEcCCCcHHHHHHHHHhcC---eEEEEecccccccCCCHHHHHHhCCCCC------eEEEECCCCCCCCcc
Confidence                678899999999999999999998   8999998766668999999999886543      378888899999998


Q ss_pred             CC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCC---CCCeeEEccCCcCCCC-CcceEEEeeCchhhhh
Q 037144          250 DP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE---CVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLS  322 (502)
Q Consensus       250 dp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~---~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~  322 (502)
                      -+   +++|+++|+++|+++++|.+|+......+.+........   .-..+..+++|.++.| ..+|+++.. ...+..
T Consensus       180 ~~~~~~~~l~~~~~~~~~~iI~De~Y~~~~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~GlRvG~~~~~-~~~~~~  258 (388)
T d1j32a_         180 YTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGP-VPLVKA  258 (388)
T ss_dssp             CCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCEEEECC-HHHHHH
T ss_pred             cchhhhhhhhcccccCCeEEEchhhhhcccccCCCCCCHHHhCcccccceeEecCChhhhhcchhHeEEEEEC-HHHHHH
Confidence            44   778888899999999999999766554332222111100   1225567799999754 668887653 333322


Q ss_pred             hhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHH--hcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 037144          323 TLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRN--FGVANLRNFIRSHVGMAKLFERLVTSDKRFE  400 (502)
Q Consensus       323 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~--~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~  400 (502)
                      .. ....+...                       .......+++...  .+.+.+.+..+++.++++.+.+.|++.++++
T Consensus       259 ~~-~~~~~~~~-----------------------~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~  314 (388)
T d1j32a_         259 AT-KIQGHSTS-----------------------NVCTFAQYGAIAAYENSQDCVQEMLAAFAERRRYMLDALNAMPGLE  314 (388)
T ss_dssp             HH-HHHHTTTC-----------------------SCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHTCTTCB
T ss_pred             HH-Hhhhhccc-----------------------cccHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCE
Confidence            11 11111100                       0022222333333  3567788899999999999999999998888


Q ss_pred             EecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeECCEEEEEEEec
Q 037144          401 VAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVGGIYVLRFAAG  479 (502)
Q Consensus       401 l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lR~~~~  479 (502)
                      +. +|+.++++|.-.+...                      .  +  ..++.+++. +.|..+.++..+++.+++|++++
T Consensus       315 ~~-~p~gg~~l~~~l~~~~----------------------~--~--~~~~~~~ll~~~gV~v~pG~~F~~~~~~Rls~~  367 (388)
T d1j32a_         315 CP-KPDGAFYMFPSIAKTG----------------------R--S--SLDFCSELLDQHQVATVPGAAFGADDCIRLSYA  367 (388)
T ss_dssp             CC-CCCBTTEECCBCGGGT----------------------C--C--HHHHHHHHHHHHCEECEEGGGGTCTTBEEEECC
T ss_pred             ec-CCCceEEEEEECCCCC----------------------C--C--HHHHHHHHHHhCCEEEEeccccCCCCeEEEEEe
Confidence            75 5666665553222110                      0  0  123444444 34766666666666789999986


Q ss_pred             CCCCcHHHHHHHHHHHHHHHHh
Q 037144          480 NSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       480 ~~~t~~~di~~~~~~l~~~~~~  501 (502)
                         +++++++++++.|+++.+.
T Consensus       368 ---~~~e~l~~al~rl~~~l~~  386 (388)
T d1j32a_         368 ---TDLDTIKRGMERLEKFLHG  386 (388)
T ss_dssp             ---SCHHHHHHHHHHHHHHHHH
T ss_pred             ---CCHHHHHHHHHHHHHHHHH
Confidence               4677999999999998765

>d1v72a1 c.67.1.1 (A:6-350) Phenylserine aldolase PSALD {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Phenylserine aldolase PSALD
species: Pseudomonas putida [TaxId: 303]

Probab=99.90  E-value=3.4e-23  Score=202.63  Aligned_cols=326  Identities=12%  Similarity=0.021  Sum_probs=209.0

Q ss_pred             CHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHH
Q 037144           88 SVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKK  167 (502)
Q Consensus        88 ~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~  167 (502)
                      ..|.++..+..+..+ ....|...+    +.+++.+++++++|.+.        +.+||+|||+||+.++..++.     
T Consensus        15 ~~P~v~~A~~~a~~~-~~~~~~~~~----~~~~l~~~la~~~g~~~--------~v~f~~sGt~An~~a~~~~~~-----   76 (345)
T d1v72a1          15 ASPEVAQALVKHSSG-QAGPYGTDE----LTAQVKRKFCEIFERDV--------EVFLVPTGTAANALCLSAMTP-----   76 (345)
T ss_dssp             CCHHHHHHHHHTTSS-CCCSTTCSH----HHHHHHHHHHHHHTSCC--------EEEEESCHHHHHHHHHHTSCC-----
T ss_pred             CCHHHHHHHHHHhcc-CccccCCCH----HHHHHHHHHHHHHCCCc--------EEEECCchHHHHHHHHHHHHh-----
Confidence            356666554443222 233454444    55567788899999864        478999999999998887654     


Q ss_pred             hCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccE--EEEEecCC--
Q 037144          168 IGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPL--FLCATVGT--  243 (502)
Q Consensus       168 ~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~--~Vv~t~gt--  243 (502)
                            .+..+++....|+++.......+.+...+..++.+.  ++.++++.+++.+.+.......+.  ++..+.++  
T Consensus        77 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (345)
T d1v72a1          77 ------PWGNIYCHPASHINNDECGAPEFFSNGAKLMTVDGP--AAKLDIVRLRERTREKVGDVHTTQPACVSITQATEV  148 (345)
T ss_dssp             ------TTEEEEECTTSHHHHSSTTHHHHHTTSCEEEECCCG--GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCTT
T ss_pred             ------cCCccccccccceeeechhhHHHhcCcccccccccc--cccccHHHhhhhhcccccccccccceeeeeeccccc
Confidence                  456677788899887765544433333777766553  568999999999987654333333  33333322  


Q ss_pred             ccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhh-cCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhh
Q 037144          244 TAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFI-DGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLS  322 (502)
Q Consensus       244 t~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~-~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~  322 (502)
                      ...+.+++++++.++|++||+++|+|++++++........... ......+.++.+.+|.+...  .+............
T Consensus       149 ~~~~~~~~~~~i~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~  226 (345)
T d1v72a1         149 GSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKNGVLA--AEAIVLFNTSLATE  226 (345)
T ss_dssp             SCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGGGTCCEEEECCGGGTCSS--CEEEEESSGGGHHH
T ss_pred             cccccchhhhhHHHHHHhcCceeeecccccceeccccccCHHHhhccccccccccCcccccccc--ccccccchhhhhhh
Confidence            2233457788999999999999999999977654432211100 11123455666666655433  44444433322111


Q ss_pred             hhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144          323 TLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA  402 (502)
Q Consensus       323 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~  402 (502)
                      .. .  .+..                   ...+....+...+.+...+......+...+...+++++.+.+.++|++++.
T Consensus       227 ~~-~--~~~~-------------------~~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~  284 (345)
T d1v72a1         227 MS-Y--RRKR-------------------AGHLSSKMRFLSAQIDAYLTDDLWLRNARKANAAAQRLAQGLEGLGGVEVL  284 (345)
T ss_dssp             HH-H--HHHH-------------------TTCCCSSTHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEE
T ss_pred             cc-c--cccc-------------------cccccchhhHHhhhhHHHHHHhhhhhhccchhhHHHHHHHHHHhcCCcEec
Confidence            10 0  0000                   001112234455566666777778888888999999999999999999998


Q ss_pred             cCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCC
Q 037144          403 FPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSM  482 (502)
Q Consensus       403 ~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~  482 (502)
                      .+...+++.+....                                 .+.++|.++|..+..  ...+...||+++ +..
T Consensus       285 ~p~~~niv~~~~~~---------------------------------~~~~~L~~~gi~v~~--~~~~~~~lR~~~-~~~  328 (345)
T d1v72a1         285 GGTEANILFCRLDS---------------------------------AMIDALLKAGFGFYH--DRWGPNVVRFVT-SFA  328 (345)
T ss_dssp             SCCCSSEEEEEECH---------------------------------HHHHHHHHTTCBCBC--SSSSTTEEEEEC-CTT
T ss_pred             cCCCccEEEEEcCH---------------------------------HHHHHHHHcCCCccc--cCCCCCEEEEEC-CCC
Confidence            88888888876631                                 345667777875422  223567899997 477


Q ss_pred             CcHHHHHHHHHHHHHHH
Q 037144          483 TMESHVRAAWTVVQEHL  499 (502)
Q Consensus       483 t~~~di~~~~~~l~~~~  499 (502)
                      +|+||||+++++|++++
T Consensus       329 ~T~edid~~le~lr~aa  345 (345)
T d1v72a1         329 TTAEDVDHLLNQVRLAA  345 (345)
T ss_dssp             CCHHHHHHHHHHHHHTC
T ss_pred             CCHHHHHHHHHHHHHhC
Confidence            88889999999998763

>d2bwna1 c.67.1.4 (A:2-397) 5-aminolevulinate synthase {Rhodobacter capsulatus [TaxId: 1061]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 5-aminolevulinate synthase
species: Rhodobacter capsulatus [TaxId: 1061]

Probab=99.90  E-value=5.1e-22  Score=197.84  Aligned_cols=338  Identities=13%  Similarity=0.111  Sum_probs=223.5

Q ss_pred             CCCCCCcccccCCCCCCHHHHHHHHHHhhcCCCCcccccCh---hhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCC
Q 037144           72 THWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSP---AAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGT  148 (502)
Q Consensus        72 ~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p---~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~g  148 (502)
                      .++.+-.|+|.-. .+..-....+.+..    .+.+...++   +...+..++.+.+++++|.+.         .++.++
T Consensus        48 ~~FsSndYLGL~~-~p~v~~a~~~al~~----yG~gs~~Sr~~~G~~~~h~~LE~~lA~~~g~e~---------all~~s  113 (396)
T d2bwna1          48 TVWCGNDYLGMGQ-HPVVLAAMHEALEA----VGAGSGGTRNISGTTAYHRRLEAEIAGLHQKEA---------ALVFSS  113 (396)
T ss_dssp             EECSCSCTTSGGG-CHHHHHHHHHHHHH----HCSCCCSBTTTBCCBHHHHHHHHHHHHHTTCSE---------EEEESC
T ss_pred             EEEEcccccCcCC-CHHHHHHHHHHHHH----hCCCccccccccCCchHHHHHHHHHHHHhCCCc---------eeeeec
Confidence            4466777888742 22222222333332    222222222   234455566677999999874         588888


Q ss_pred             chHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHH
Q 037144          149 TCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDV  228 (502)
Q Consensus       149 gt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~  228 (502)
                      |..||+..+.+....         .++++|+.....|.|+..++++.+.   +++.++.+       |+++|++.++...
T Consensus       114 G~~An~~~i~~l~~~---------~~~d~i~~D~~~Hasi~~g~~ls~a---~~~~f~Hn-------d~~~l~~l~~~~~  174 (396)
T d2bwna1         114 AYNANDATLSTLRVL---------FPGLIIYSDSLNHASMIEGIKRNAG---PKRIFRHN-------DVAHLRELIAADD  174 (396)
T ss_dssp             HHHHHHHHHHHHHHH---------STTCEEEEETTCCHHHHHHHHHSCC---CEEEECTT-------CHHHHHHHHHHSC
T ss_pred             chHHHHHHHHHHhcc---------cCCCceeehhhhhhccchhhhcccc---CceEeecc-------hHHHhhhHHhhhc
Confidence            999997666554221         0578999999999999999999998   99988754       7888988877543


Q ss_pred             hcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhh---cCCCCCCeeEEccCCcCCC
Q 037144          229 EAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFI---DGVECVDSFSFNPHKWLFT  305 (502)
Q Consensus       229 ~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~---~~~~~aDsi~~~~hK~l~~  305 (502)
                      +  ..+.+|++....++.|.+.||++|.++|++||++++||.||+.+.+- +..+...   .-...+|.++.++.|.++.
T Consensus       175 ~--~~~~~iv~egvySmdGd~apl~~l~~L~~~y~~~L~vDeAHs~Gv~G-~~G~G~~~~~~~~~~~di~~gTlsKa~g~  251 (396)
T d2bwna1         175 P--AAPKLIAFESVYSMDGDFGPIKEICDIAEEFGALTYIDEVHAVGMYG-PRGAGVAERDGLMHRIDIFNGTLAKAYGV  251 (396)
T ss_dssp             T--TSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSS-TTSCCHHHHHTCGGGCSEEEEESSSTTCS
T ss_pred             c--cCceeEEEEeeccCcccccccHhHHHHhhhhcceeeeccceeeeeec-cccccchhhcCCceeeeeeeecccccccc
Confidence            3  34567888889999999999999999999999999999999887653 2222221   1124689999999999975


Q ss_pred             CCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHH
Q 037144          306 TLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGM  385 (502)
Q Consensus       306 p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~l  385 (502)
                      .  .|+ +..++...........+|++.....                   +..+..+..+++.+..+...++.++...+
T Consensus       252 ~--Gg~-v~~~~~~i~~l~~~~~~~ifStalp-------------------p~~~aa~~~al~i~~~~~~~~~r~~l~~~  309 (396)
T d2bwna1         252 F--GGY-IAASARMVDAVRSYAPGFIFSTSLP-------------------PAIAAGAQASIAFLKTAEGQKLRDAQQMH  309 (396)
T ss_dssp             C--CEE-EEECHHHHHHHHHHCHHHHTSBCCC-------------------HHHHHHHHHHHHHHTSHHHHHHHHHHHHH
T ss_pred             c--ccc-cchhHHHHHHHHhhcchhhhcccCc-------------------HHHHHHHHHHHHHhhcchHHHHHHHHHHH
Confidence            4  334 4445544332223344565543211                   01122333445544444455667778889


Q ss_pred             HHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcE---
Q 037144          386 AKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKV---  461 (502)
Q Consensus       386 a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~---  461 (502)
                      .+++++.+.+. |+.+. +..++++.+.+..                            ++.+..+.++|. +.|.+   
T Consensus       310 ~~~~~~~l~~~-g~~~~-~~~spIvpv~ig~----------------------------~~~~~~~a~~lL~e~Gi~v~~  359 (396)
T d2bwna1         310 AKVLKMRLKAL-GMPII-DHGSHIVPVVIGD----------------------------PVHTKAVSDMLLSDYGVYVQP  359 (396)
T ss_dssp             HHHHHHHHHHH-TCCBC-CCSSSCEEEECCC----------------------------HHHHHHHHHHHHHHHCEECCE
T ss_pred             HHHHHHHHHhc-CCCcC-CCCCCEEEEEeCC----------------------------HHHHHHHHHHHHHhCCEEEEE
Confidence            99999999887 67765 4567788776632                            223455666654 45864   


Q ss_pred             EEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144          462 FMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEH  498 (502)
Q Consensus       462 ~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~  498 (502)
                      +..|++..+...+|++++..+|. +|||+++++|+++
T Consensus       360 i~~PtVp~g~~rlRi~lsa~ht~-edId~l~~~L~~i  395 (396)
T d2bwna1         360 INFPTVPRGTERLRFTPSPVHDL-KQIDGLVHAMDLL  395 (396)
T ss_dssp             ECTTTSCTTCCEEEECCCTTSCH-HHHHHHHHHHHHH
T ss_pred             ECCCcCCCCCeeEEEEeCccCCH-HHHHHHHHHHHHh
Confidence            22344456777899999866555 5999999999875

>d2bkwa1 c.67.1.3 (A:3-384) Alanine-glyoxylate aminotransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.89  E-value=3.3e-22  Score=200.32  Aligned_cols=325  Identities=12%  Similarity=0.005  Sum_probs=216.9

Q ss_pred             ChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh--H
Q 037144          111 SPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA--F  188 (502)
Q Consensus       111 ~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s--~  188 (502)
                      ++.+.++-.++.+.++++++.....   .....+||+|||+++..++......        ..+++.+++....|++  +
T Consensus        31 ~~~f~~~~~~~~~~~r~~~~~~~~~---~~~~i~~t~sgT~a~~~~~~~l~~~--------~~~gd~vlv~~~~~~~~~~   99 (382)
T d2bkwa1          31 SPEFVSIFQRVLKNTRAVFKSAAAS---KSQPFVLAGSGTLGWDIFASNFILS--------KAPNKNVLVVSTGTFSDRF   99 (382)
T ss_dssp             SHHHHHHHHHHHHHHHHHTTCCGGG---TCEEEEEESCTTHHHHHHHHHHSCT--------TCSCCEEEEECSSHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHhhhcCC---CCeEEEEeCcHHHHHHHHHHHHHHh--------cCCCCceEEEEechhhhhh
Confidence            5677888888999999999863210   0125889999999997776654211        1156777777778876  3


Q ss_pred             HHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhC--CEE
Q 037144          189 QKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFG--IWV  266 (502)
Q Consensus       189 ~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g--~~l  266 (502)
                      ...++..|.   .+..+...+. ....+.+.+++++.+..     +.+|++++.+|.+|...|+++++++|++++  +++
T Consensus       100 ~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~tg~~~~~~~~~~~~~~~~~~~~~  170 (382)
T d2bkwa1         100 ADCLRSYGA---QVDVVRPLKI-GESVPLELITEKLSQNS-----YGAVTVTHVDTSTAVLSDLKAISQAIKQTSPETFF  170 (382)
T ss_dssp             HHHHHHTTC---EEEEECCSST-TSCCCHHHHHHHHHHSC-----CSEEEEESEETTTTEECCHHHHHHHHHHHCTTSEE
T ss_pred             hhhcccccc---ccccccccCC-CCccchhHHHHHhhhcc-----chheeeeeccccccccccchhhhhhccccccceee
Confidence            445666777   6766654432 23678898988886542     348999999999999999999999998875  999


Q ss_pred             EeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhh-----cCCcccccCccCCCCCc
Q 037144          267 HVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTL-----STNPQYLKNEATDQEPK  341 (502)
Q Consensus       267 hVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~-----~~~~~yl~~~~~~~~~~  341 (502)
                      |||++++.+..+++-...      ++|++++++|||+++|.|+|+++++++.... ..     .....|......     
T Consensus       171 ~vDa~qs~g~~pid~~~~------giD~~~~s~~K~l~gP~G~g~l~vs~~~~~~-~~~~~~~~~~~~~~~~~~~-----  238 (382)
T d2bkwa1         171 VVDAVCSIGCEEFEFDEW------GVDFALTASQKAIGAPAGLSISLCSSRFMDY-ALNDSKNGHVHGYFSSLRR-----  238 (382)
T ss_dssp             EEECTTTTTTSCCCTTTT------TCSEEEEESSSTTCCCSCEEEEEECHHHHHH-HTCHHHHCCCSCSTTCHHH-----
T ss_pred             eeeccccccccccccccc------CeeEEeecccccCcCCCchhhhhccHHHHhh-hhhcccCCCcccchhhhhh-----
Confidence            999999999888764332      8999999999999999999999998764321 11     011112111000     


Q ss_pred             ccccCCC--cccccCCCCC-----CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC--C---CeeE
Q 037144          342 EQEVGYK--DWQITLCRRF-----RSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP--R---NFSL  409 (502)
Q Consensus       342 ~~~~~~~--~~~~~~sr~~-----~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~--~---~~~~  409 (502)
                        .....  ..........     ...++-.+++.+..+|..++.+++.++++++++.+.+.+++..+..  +   ...+
T Consensus       239 --~~~~~~~~~~~~~~~~~Tp~~~~i~al~~aL~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~s~~v  316 (382)
T d2bkwa1         239 --WTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNGLQLTSVSRYPSNMSAHGL  316 (382)
T ss_dssp             --HHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTTCCEESSCSSSTTBCSSC
T ss_pred             --hhhhhhcccccccccccCCcHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhhhcccccccccCchhccCCcE
Confidence              00000  0000000111     1135557777777889999999999999999999988777766542  1   1245


Q ss_pred             EEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeE--CCEEEEEEEecCCCCcHHH
Q 037144          410 VCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIV--GGIYVLRFAAGNSMTMESH  487 (502)
Q Consensus       410 v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~--~g~~~lR~~~~~~~t~~~d  487 (502)
                      ++|..+.                               ...+.+.|.+.|.. +..+..  .+..++|++.+++.++++|
T Consensus       317 ~~~~~~~-------------------------------~~~~~~~L~~~gi~-i~~G~~~~~~~~~~Ri~~~G~~~~~e~  364 (382)
T d2bkwa1         317 TAVYVAD-------------------------------PPDVIAFLKSHGVV-IAGGIHKDIGPKYIRIGHMGVTACNKN  364 (382)
T ss_dssp             EEEECSC-------------------------------HHHHHHHHHHTTEE-CBCCCCTTTGGGEEEECCCGGGTSSTT
T ss_pred             EEEcCCC-------------------------------HHHHHHHHHHCCeE-EECCCChhhcCCEEEEeCCcCCCCHHH
Confidence            5666542                               12445556666764 333222  2356899996667777778


Q ss_pred             HHHHHHHHHHHHHh
Q 037144          488 VRAAWTVVQEHLEA  501 (502)
Q Consensus       488 i~~~~~~l~~~~~~  501 (502)
                      |++++++|..+.+.
T Consensus       365 i~~l~~~l~~i~~~  378 (382)
T d2bkwa1         365 LPYMKNCFDLIKLA  378 (382)
T ss_dssp             CTHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH
Confidence            88888888766543

>d2ch1a1 c.67.1.3 (A:2-389) 3-hydroxykynurenine transaminase {Malaria mosquito (Anopheles gambiae) [TaxId: 7165]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: 3-hydroxykynurenine transaminase
species: Malaria mosquito (Anopheles gambiae) [TaxId: 7165]

Probab=99.89  E-value=4.5e-22  Score=199.66  Aligned_cols=352  Identities=13%  Similarity=0.039  Sum_probs=219.6

Q ss_pred             CcccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHH
Q 037144           77 PNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCT  156 (502)
Q Consensus        77 p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~a  156 (502)
                      |+.+-+.|++...+.-+-+.+.   ....++  -++.+.++-+++++.|++++|.++..      ..+||+|||+++..+
T Consensus        16 ~~~~l~~PGP~~~~~~V~~Am~---~~~~~h--r~~ef~~i~~~~r~~L~~ll~~~~~~------~i~~~gsgT~a~ea~   84 (388)
T d2ch1a1          16 PEKIMMGPGPSNCSKRVLTAMT---NTVLSN--FHAELFRTMDEVKDGLRYIFQTENRA------TMCVSGSAHAGMEAM   84 (388)
T ss_dssp             CCCBCCSSSSCCCCHHHHHHTT---SCCCCT--TCHHHHHHHHHHHHHHHHHHTCCCSC------EEEESSCHHHHHHHH
T ss_pred             CcceeeeCCCCCCCHHHHHHhC---cCCCCC--CCHHHHHHHHHHHHHHHHHhCCCCCe------EEEEcCcHHHHHHHH
Confidence            4444455665544433333322   222222  35788889999999999999997542      466788899988766


Q ss_pred             HHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH--HHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCcc
Q 037144          157 LTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ--KAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIP  234 (502)
Q Consensus       157 l~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~--~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p  234 (502)
                      +.....           ++..+++....|++..  ..+..++.   ..+.++..+.  ...+.+.+++++....     +
T Consensus        85 ~~~l~~-----------~~~~vl~~~~g~~~~~~~~~~~~~~~---~~~~~~~~~~--~~~~~~~~~~~~~~~~-----~  143 (388)
T d2ch1a1          85 LSNLLE-----------EGDRVLIAVNGIWAERAVEMSERYGA---DVRTIEGPPD--RPFSLETLARAIELHQ-----P  143 (388)
T ss_dssp             HHHHCC-----------TTCEEEEEESSHHHHHHHHHHHHTTC---EEEEEECCTT--SCCCHHHHHHHHHHHC-----C
T ss_pred             HHHhcc-----------ccccccccccccccccchhhhhhhcc---cccccccccc--cccchhhhhhhhccCC-----c
Confidence            555432           3445555556776643  44566677   7888887753  3678887777765432     3


Q ss_pred             EEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEe
Q 037144          235 LFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWV  314 (502)
Q Consensus       235 ~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~  314 (502)
                      .+|++++.+|.+|.+.|+++|+++|+++|..++||++++.+..+++-...      ++|+++++.|||+++|.|+|++++
T Consensus       144 ~~v~~~~~~t~tG~~~~~~~i~~~~~~~~~~~~vD~~ss~g~~pid~~~~------~~d~~~~s~~K~~~gp~G~g~~~~  217 (388)
T d2ch1a1         144 KCLFLTHGDSSSGLLQPLEGVGQICHQHDCLLIVDAVASLCGVPFYMDKW------EIDAVYTGAQKVLGAPPGITPISI  217 (388)
T ss_dssp             SEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCCTTTT------TCCEEECCCC-CCCCCSSCEEEEE
T ss_pred             ceeeeeecccccccccchhhhcchhccccceeeeeeeecccccccchhcc------CceEEEEccccccCCCCeEEEEec
Confidence            48999999999999999999999999999999999999888877653222      899999999999999999999998


Q ss_pred             eCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccC-CCCCC-----chHHHHHHHHhcHHHHHHHHHHHHHHHHH
Q 037144          315 KDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITL-CRRFR-----SLKLWVVIRNFGVANLRNFIRSHVGMAKL  388 (502)
Q Consensus       315 r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~-sr~~~-----al~~~~~l~~~g~~g~~~~~~~~~~la~~  388 (502)
                      ++..... ..............    ............+. .++..     ...+..+++.+..++.....++...+..+
T Consensus       218 ~~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~t~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~  292 (388)
T d2ch1a1         218 SPKALDV-IRNRRTKSKVFYWD----LLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQI  292 (388)
T ss_dssp             CHHHHHH-HHTCSSCCSCGGGC----HHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred             cHHHHHh-hhcccCcccccccc----chhhhhhhcccccccccCccchHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence            7664321 11111111000000    00000000000001 11111     12444556666667777777777887777


Q ss_pred             HHHHHhcCCCeEEe-cCC--Ce-eEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcEEE
Q 037144          389 FERLVTSDKRFEVA-FPR--NF-SLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKVFM  463 (502)
Q Consensus       389 l~~~l~~~~~~~l~-~~~--~~-~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~  463 (502)
                      ....+.... +.+. ..+  ++ .+++|.++.. .+                           ..++.+.|.++ |.. +
T Consensus       293 ~~~~~~~~~-~~~~~~~~~~rs~~v~~~~~p~g-~~---------------------------~~~l~~~l~~~~gI~-v  342 (388)
T d2ch1a1         293 LYEGLGKMG-LDIFVKDPRHRLPTVTGIMIPKG-VD---------------------------WWKVSQYAMNNFSLE-V  342 (388)
T ss_dssp             HHHHHHHHT-CCBSSCSGGGBCTTEEEEECCTT-CC---------------------------HHHHHHHHHHHHCBC-C
T ss_pred             HHhhhhhcc-cccccCCHHHhCCeEEEEECCCC-CC---------------------------HHHHHHHHhhcCCEE-E
Confidence            777776653 3332 222  23 4678887542 10                           12445555444 543 3


Q ss_pred             EeeeE-CCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          464 THAIV-GGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       464 ~~~~~-~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      ..+.. ....++|++.+++.+++|||++++++|++++++
T Consensus       343 ~~G~~~~~~~~~RIs~~g~~~t~edI~~ll~alke~L~~  381 (388)
T d2ch1a1         343 QGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGFKESLKA  381 (388)
T ss_dssp             BCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred             eCCCccccCCEEEEcCCcCCCCHHHHHHHHHHHHHHHHh
Confidence            33221 123489999656677888999999999998875

>d1bs0a_ c.67.1.4 (A:) PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS)
species: Escherichia coli [TaxId: 562]

Probab=99.89  E-value=7.4e-22  Score=197.33  Aligned_cols=296  Identities=11%  Similarity=0.051  Sum_probs=205.0

Q ss_pred             HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH
Q 037144          115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI  194 (502)
Q Consensus       115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~  194 (502)
                      ..+..++.+.|++++|.+.         .+++++|++||+.++.+...           +++.|++....|.|+..+++.
T Consensus        82 ~~~~~~lE~~LA~~~g~e~---------al~~~SG~~an~~~i~al~~-----------~~d~v~~d~~~h~si~~g~~~  141 (383)
T d1bs0a_          82 SVVHQALEEELAEWLGYSR---------ALLFISGFAANQAVIAAMMA-----------KEDRIAADRLSHASLLEAASL  141 (383)
T ss_dssp             CHHHHHHHHHHHHHHTCSE---------EEEESCHHHHHHHHHHHHCC-----------TTCEEEEETTCCHHHHHHHHT
T ss_pred             chHHHHHHHHHHHhcCCCc---------eEEecccchhhHHHHHhhcC-----------CCceEEeeccccHHHhhcccc
Confidence            3444555566888888763         68889999999887766543           678899999999999999998


Q ss_pred             cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccccc
Q 037144          195 VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAG  274 (502)
Q Consensus       195 ~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~  274 (502)
                      .+.   .++.++.       .|+++|++.+.+...   ...+|++....++.|.+.|+++|.++|++||++++||.||+.
T Consensus       142 ~~~---~~~~~~h-------nd~~~le~~l~~~~~---~~~~vv~e~v~s~~G~i~pl~~l~~l~~~~~~~livDeah~~  208 (383)
T d1bs0a_         142 SPS---QLRRFAH-------NDVTHLARLLASPCP---GQQMVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGT  208 (383)
T ss_dssp             SSS---EEEEECT-------TCHHHHHHHHHSCCS---SCEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTT
T ss_pred             CCC---cceEecc-------hHHHHHHHHhcccCC---CceEEEecCCCCCCCcccchhHHHHHHHhcCcEEEeecceee
Confidence            887   8888874       489999999875432   235788888899999999999999999999999999999988


Q ss_pred             ccccCccchhh--hcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccc
Q 037144          275 SACICPEFRHF--IDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQI  352 (502)
Q Consensus       275 ~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~  352 (502)
                      +.+.-. .+..  ..++ ..|.+..++.|.++.+  .|++.. +.............|++.....               
T Consensus       209 gv~G~~-g~G~~~~~~~-~~~~~~~t~~ka~g~~--Gg~v~~-~~~~~~~l~~~~~~~~~s~~~~---------------  268 (383)
T d1bs0a_         209 GVIGEQ-GRGSCWLQKV-KPELLVVTFGKGFGVS--GAAVLC-SSTVADYLLQFARHLIYSTSMP---------------  268 (383)
T ss_dssp             TTSSGG-GCCHHHHTTC-CCSEEEEESSSTTSSC--CEEEEE-CHHHHHHHHHHCHHHHSSBCCC---------------
T ss_pred             eecCCc-ccchHHHcCC-cccccccccccccccc--cccccc-chhHHHHHHhhchhhhhccccc---------------
Confidence            766422 2211  1122 5667777888988765  334433 3333222222334454432210               


Q ss_pred             cCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCc
Q 037144          353 TLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTY  432 (502)
Q Consensus       353 ~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~  432 (502)
                          +..+.++..+++.+-......+.++..++..++++.|.+. ++.+. +..++++.+....                
T Consensus       269 ----p~~~aa~~~a~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~-g~~~~-~~~s~Ii~v~~g~----------------  326 (383)
T d1bs0a_         269 ----PAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDL-PFTLA-DSCSAIQPLIVGD----------------  326 (383)
T ss_dssp             ----HHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTS-SCEEC-SCCSSBCCEEEES----------------
T ss_pred             ----chHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhc-CCccC-CCCCCEEEEEECC----------------
Confidence                0111233344544444556677888889999999999988 68775 4456666555432                


Q ss_pred             ccccccchhHhhHHHHHHHHHHHHhcCcEE---EEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144          433 DQYRQFSEEERTNEFNRELLESINVSGKVF---MTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEH  498 (502)
Q Consensus       433 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~---~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~  498 (502)
                                  ++...++.++|.++|...   ..|++..|...+|++++..+| ++|||+++++|..+
T Consensus       327 ------------~~~a~~~~~~L~~~Gi~v~~~~~PtVp~g~~~lRi~~~a~ht-~edid~l~~~L~~~  382 (383)
T d1bs0a_         327 ------------NSRALQLAEKLRQQGCWVTAIRPPTVPAGTARLRLTLTAAHE-MQDIDRLLEVLHGN  382 (383)
T ss_dssp             ------------HHHHHHHHHHHHHTTEECCEECTTSSCTTCEEECCBCCTTCC-HHHHHHHHHHHHHH
T ss_pred             ------------HHHHHHHHHHHHHCCceEEEEcCCCCCCCCceEEEEeCCCCC-HHHHHHHHHHHHhc
Confidence                        233567788888888742   233445677889999976655 55999999999865

>d1c4ka2 c.67.1.5 (A:108-569) Ornithine decarboxylase major domain {Lactobacillus sp., strain 30a [TaxId: 1591]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Ornithine decarboxylase major domain
domain: Ornithine decarboxylase major domain
species: Lactobacillus sp., strain 30a [TaxId: 1591]

Probab=99.88  E-value=1.2e-21  Score=201.28  Aligned_cols=247  Identities=10%  Similarity=-0.061  Sum_probs=154.4

Q ss_pred             HHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCC
Q 037144          121 VMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRK  200 (502)
Q Consensus       121 ~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~  200 (502)
                      +.+.++++||.+.         .+|+++||+++..|+..+.-.          ++++|+++..+|.|+..++..++....
T Consensus        71 ae~~~A~~~ga~~---------a~f~~~Gtt~~n~a~i~a~~~----------~gd~Vi~~~~~H~Sv~~~~~~l~~~~~  131 (462)
T d1c4ka2          71 AEKHAARVYNADK---------TYFVLGGSSNANNTVTSALVS----------NGDLVLFDRNNHKSVYNSALAMAGGRP  131 (462)
T ss_dssp             HHHHHHHHTTCSE---------EEEESSHHHHHHHHHHHHHCC----------TTCEEEEETTCCHHHHHHHTTTTCCEE
T ss_pred             HHHHHHHHhCCCe---------EEEECCchHHHHHHHHHHhcC----------CCCeEEecccchHHHHHHHHHHhcCCc
Confidence            4466899999864         567766666555554444322          789999999999999998776644221


Q ss_pred             CEEEEecCCCC-Cc-----ccCHHHHHHHHHH---HHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecc
Q 037144          201 NIRAIKTTKSS-SY-----GLSAESVLSQINL---DVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAA  271 (502)
Q Consensus       201 ~v~~v~~~~~~-~~-----~~d~~~Le~~i~~---~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA  271 (502)
                      .++.+++++.+ .+     .++.+.+++.+..   .......+..|++....|..|.+.|+++|+++|++||+++|||+|
T Consensus       132 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~G~~~dl~~I~~ia~~~g~~l~vD~A  211 (462)
T d1c4ka2         132 VYLQTNRNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLGTYDGTIYNAHEVVKRIGHLCDYIEFDSA  211 (462)
T ss_dssp             EEECEEECTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESBCTTSEEECHHHHHHHHGGGBSEEEEECT
T ss_pred             eeeecccccccccCCCChHHhhHHHHHhhhhhhcHHhhhccCCceeEEEEeeeeccchhhHHHHHHHHHHcCCEEEEech
Confidence            33344444321 11     3344444443321   122334455666677778999999999999999999999999999


Q ss_pred             cccccccCccchhhhc--C-----CCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccc
Q 037144          272 YAGSACICPEFRHFID--G-----VECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQE  344 (502)
Q Consensus       272 ~g~~~~~~~~~~~~~~--~-----~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~  344 (502)
                      |+++....+.++....  +     ...+|++++++||+++++.+++++..++.....     ...+.....         
T Consensus       212 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~~S~HK~lg~~~~g~ll~~~~~~~~~-----~~~~~~~~~---------  277 (462)
T d1c4ka2         212 WVGYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFSQTSQIHKKDSHIKG-----QLRYCDHKH---------  277 (462)
T ss_dssp             TCCGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCTTCEEEEEECGGGTT-----STTCCCHHH---------
T ss_pred             hhccccccCcCCcchhhccccccccCCccEEEEecCcccccccceEEEEeccccccc-----cchhhhHHH---------
Confidence            9999887776543321  1     124699999999999999888888777653311     111111000         


Q ss_pred             cCCCcccccCCCCC--CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 037144          345 VGYKDWQITLCRRF--RSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFE  400 (502)
Q Consensus       345 ~~~~~~~~~~sr~~--~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~  400 (502)
                      ........+.+.+.  ....+-.+...+..+...++.++..++++++++++.+++++.
T Consensus       278 ~~~~~~~~~t~sp~~~~~asl~~a~~~~~~~~g~~l~~~~~~~a~~~r~~l~~~~~~~  335 (462)
T d1c4ka2         278 FNNSFNLFMSTSPFYPMYAALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMF  335 (462)
T ss_dssp             HHHHHHHHSCSSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred             HHHhhhhcccCCchHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence            00000001111111  112223344444556677888899999999999998876543

>d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermus thermophilus [TaxId: 274]

Probab=99.88  E-value=5.8e-22  Score=198.62  Aligned_cols=327  Identities=12%  Similarity=0.058  Sum_probs=219.1

Q ss_pred             HHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHh
Q 037144           89 VAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKI  168 (502)
Q Consensus        89 ~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~  168 (502)
                      +|..+.+.+...+......|....+..++.+.+.+|+.+..|.+-+.     ...++|+|+++++..++.+..+      
T Consensus        45 ~p~~i~~a~~~~~~~~~~~Y~~~~G~~~lR~~ia~~~~~~~~~~~~~-----~~i~it~G~~~al~~~~~~l~~------  113 (382)
T d1b5pa_          45 TPEHVKEAARRALAQGKTKYAPPAGIPELREALAEKFRRENGLSVTP-----EETIVTVGGSQALFNLFQAILD------  113 (382)
T ss_dssp             CCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHTTCCCCCG-----GGEEEESHHHHHHHHHHHHHCC------
T ss_pred             CCHHHHHHHHHHHhcCCcCCCCCCCCHHHHHHHHhhhhhhccccccc-----ccceecCCHHHHHHHHHHHhCC------
Confidence            35556677777776666678777788999999999999998875321     2689999999888776665543      


Q ss_pred             CccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144          169 GRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA  248 (502)
Q Consensus       169 ~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~  248 (502)
                           +++.|++..+.+..+..+++..|.   +++.+|+++++++.+|+++|++++++.+      .+++++.++|+||.
T Consensus       114 -----~gd~vl~~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~~~~~~------~~i~~~~P~NPTG~  179 (382)
T d1b5pa_         114 -----PGDEVIVLSPYWVSYPEMVRFAGG---VVVEVETLPEEGFVPDPERVRRAITPRT------KALVVNSPNNPTGA  179 (382)
T ss_dssp             -----TTCEEEEEESCCTHHHHHHHHTTC---EEEEEECCGGGTTCCCHHHHHTTCCTTE------EEEEEESSCTTTCC
T ss_pred             -----CCCEEEECCCCcHHHHHHHHHhcC---eEEEEecccccccCCCHHHHHHhCCCCC------eEEEECCCCCCcch
Confidence                 577888888899999999999999   9999998765568999999999875443      37778889999999


Q ss_pred             c---CChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhh
Q 037144          249 V---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTL  324 (502)
Q Consensus       249 i---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~  324 (502)
                      +   +.+++|+++|++||+|++.|.+|+...+....... ......-..+..++.|.++.| ..+|+++.. +..+....
T Consensus       180 ~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~-~~~~~~~~i~~~s~SK~~~~~GlR~G~~~~~-~~~i~~~~  257 (382)
T d1b5pa_         180 VYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP-GRVAPEHTLTVNGAAKAFAMTGWRIGYACGP-KEVIKAMA  257 (382)
T ss_dssp             CCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCG-GGTCTTTEEEEEESTTTTTCGGGCCEEEECC-HHHHHHHH
T ss_pred             hCCHHHHHHHHHHHHHcCeEEEEEccccceecCCCCCCH-HHcCCCCEEEEecchhhccCcHhheEEEEEC-HHHHHHHH
Confidence            9   45788999999999999999999876553322211 111112224456799999755 678887764 33332221


Q ss_pred             cCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHH-----hcHHHHHHHHHHHHHHHHHHHHHHhcCCCe
Q 037144          325 STNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRN-----FGVANLRNFIRSHVGMAKLFERLVTSDKRF  399 (502)
Q Consensus       325 ~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~-----~g~~g~~~~~~~~~~la~~l~~~l~~~~~~  399 (502)
                      ... .+....                       ......+.+...     .....+....+.+..+++.+.+.+.+. ++
T Consensus       258 ~~~-~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~  312 (382)
T d1b5pa_         258 SVS-RQSTTS-----------------------PDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTAL-GL  312 (382)
T ss_dssp             HHH-HTTTCS-----------------------CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TC
T ss_pred             HHH-HhcccC-----------------------cccccccccccccccccchhHHHHHHHHHHHhhhhHHHHHHhhc-CC
Confidence            110 000000                       011111111111     123334555566677777888888776 67


Q ss_pred             EEecCCCeeEEEE-EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEe
Q 037144          400 EVAFPRNFSLVCF-RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAA  478 (502)
Q Consensus       400 ~l~~~~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~  478 (502)
                      ++. +|+.++++| .+.+...                         +  ...+.+.+.++|.++.++..+.+.+++|+++
T Consensus       313 ~~~-~p~gg~~~~~~~~~~~~-------------------------~--~~~~~~~l~e~gV~v~PG~~F~~~~~iRis~  364 (382)
T d1b5pa_         313 KAV-RPSGAFYVLMDTSPIAP-------------------------D--EVRAAERLLEAGVAVVPGTDFAAFGHVRLSY  364 (382)
T ss_dssp             CBC-CCSBTTEEEEECTTTCS-------------------------S--HHHHHHHHHHTTEECEESGGGTCTTEEEEEC
T ss_pred             eEe-cCCceEEEeEeCCCCCC-------------------------C--HHHHHHHHHHCCEEEEeCcccCCCCeEEEEE
Confidence            765 455555444 4433211                         0  2345666777887776666667778999998


Q ss_pred             cCCCCcHHHHHHHHHHHHHH
Q 037144          479 GNSMTMESHVRAAWTVVQEH  498 (502)
Q Consensus       479 ~~~~t~~~di~~~~~~l~~~  498 (502)
                      +   +++++|++++++|.++
T Consensus       365 ~---~~~e~l~~al~rl~~~  381 (382)
T d1b5pa_         365 A---TSEENLRKALERFARV  381 (382)
T ss_dssp             C---SCHHHHHHHHHHGGGG
T ss_pred             c---CCHHHHHHHHHHHHHh
Confidence            5   3677899888887664

>d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=99.88  E-value=7.2e-22  Score=198.28  Aligned_cols=333  Identities=11%  Similarity=0.042  Sum_probs=217.6

Q ss_pred             HHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHh
Q 037144           89 VAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKI  168 (502)
Q Consensus        89 ~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~  168 (502)
                      +|..+.+.+...++.....|....+..++.+++.+|+.+..+.....    ....++|+|+++++..++.+..+      
T Consensus        39 ~p~~v~~~~~~a~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~----~~~i~~t~G~~~~l~~~~~~l~~------  108 (388)
T d1gdea_          39 TPQHIKEYAKEALDKGLTHYGPNIGLLELREAIAEKLKKQNGIEADP----KTEIMVLLGANQAFLMGLSAFLK------  108 (388)
T ss_dssp             CCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCT----TTSEEEESSTTHHHHHHHTTTCC------
T ss_pred             CCHHHHHHHHHHHhcCccCCCCCcCCHHHHHHHHHHHHhhccccCCC----hheeeeccCcchHHHHHHHHhcC------
Confidence            45566677777666555567777778899999999998877653211    12689999999998777665443      


Q ss_pred             CccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144          169 GRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA  248 (502)
Q Consensus       169 ~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~  248 (502)
                           +++.|++..++|..+..+++.+|.   +++.+|+++++++.+|+++|++++++.+      .+++++.++|+||.
T Consensus       109 -----~gd~vlv~~P~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~~~------~~i~~~~P~NPtG~  174 (388)
T d1gdea_         109 -----DGEEVLIPTPAFVSYAPAVILAGG---KPVEVPTYEEDEFRLNVDELKKYVTDKT------RALIINSPCNPTGA  174 (388)
T ss_dssp             -----TTCEEEEEESCCTTHHHHHHHHTC---EEEEEECCGGGTTCCCHHHHHHHCCTTE------EEEEEESSCTTTCC
T ss_pred             -----CCCEEEECCCCcHHHHHHHHHcCC---EEEEeecccccCCCCCHHHHHHhCccCC------eEEEECCCcCCCCC
Confidence                 677888888999999999999999   9999999876678999999999886543      47888899999999


Q ss_pred             c---CChhHHHHHHHHhCCEEEeecccccccccCccchhhh--cCCCCCCeeEEccCCcCCC-CCcceEEEeeCchhhhh
Q 037144          249 V---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFI--DGVECVDSFSFNPHKWLFT-TLDCCCLWVKDPSCLLS  322 (502)
Q Consensus       249 i---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~--~~~~~aDsi~~~~hK~l~~-p~~~g~~~~r~~~~l~~  322 (502)
                      +   +.+++|+++|++|++++++|.+|+......+......  .....-..+..+++|.++. ...+|+++..+. ....
T Consensus       175 ~~s~~~~~~l~~~a~~~~~~vi~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~ii~~~~-~~~~  253 (388)
T d1gdea_         175 VLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSW-IIER  253 (388)
T ss_dssp             CCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGGCCEEEECCHH-HHHH
T ss_pred             cCCHHHHHHHHHHHHHcCCEEEEEcCChhhhhccCCCCChhhccCCCCeEEEEeCChhhccCccccEEEEEeecc-chhh
Confidence            9   4578889999999999999999977654322222111  1111112456679999874 477888876543 2211


Q ss_pred             hhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc----HHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 037144          323 TLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG----VANLRNFIRSHVGMAKLFERLVTSDKR  398 (502)
Q Consensus       323 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g----~~g~~~~~~~~~~la~~l~~~l~~~~~  398 (502)
                      ..... .....                       ....+....+...+.    .+.+....+++.+....+.+.+... +
T Consensus       254 ~~~~~-~~~~~-----------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~  308 (388)
T d1gdea_         254 MVKFQ-MYNAT-----------------------CPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEM-G  308 (388)
T ss_dssp             HHHHH-HTTTC-----------------------SCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHT-T
T ss_pred             hhhcc-ccccc-----------------------cccccchhhHHHHHhhccchhHHHHHHHHHHHhhhhhhhhhhhc-c
Confidence            11100 00000                       001222222222221    2334556666677788888888876 5


Q ss_pred             eEEecCCCeeEEEE-EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcEEEEeeeE--CCEEEE
Q 037144          399 FEVAFPRNFSLVCF-RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKVFMTHAIV--GGIYVL  474 (502)
Q Consensus       399 ~~l~~~~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~--~g~~~l  474 (502)
                      ++.. +|+.+++.| ++.+...                           ...++.+++.++ |..+.++..+  .+..++
T Consensus       309 ~~~~-~p~gg~fl~~~l~~~~~---------------------------~~~~~~~~ll~e~gV~v~PG~~F~~~~~~~i  360 (388)
T d1gdea_         309 LPTV-KPKGAFYIFPRIRDTGL---------------------------TSKKFSELMLKEARVAVVPGSAFGKAGEGYV  360 (388)
T ss_dssp             CCCC-CCCBTTEECCBCGGGTC---------------------------CHHHHHHHHHHHTCEECEEGGGGCGGGTTBE
T ss_pred             cccc-CCCceEEEEEECCCCCC---------------------------CHHHHHHHHHHhCCEEEEechhhCCCCCCEE
Confidence            6654 455444443 3322110                           023455555544 6544444333  235789


Q ss_pred             EEEecCCCCcHHHHHHHHHHHHHHHHhC
Q 037144          475 RFAAGNSMTMESHVRAAWTVVQEHLEAF  502 (502)
Q Consensus       475 R~~~~~~~t~~~di~~~~~~l~~~~~~~  502 (502)
                      |++++   +++++++++++.|+++.+++
T Consensus       361 Ris~~---~~~e~l~~al~rL~~~l~e~  385 (388)
T d1gdea_         361 RISYA---TAYEKLEEAMDRMERVLKER  385 (388)
T ss_dssp             EEECC---SCHHHHHHHHHHHHHHHHHT
T ss_pred             EEEec---CCHHHHHHHHHHHHHHHHhc
Confidence            99986   36679999999999988764

>d1m7ya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Apple (Malus domestica) [TaxId: 3750]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Apple (Malus domestica) [TaxId: 3750]

Probab=99.86  E-value=8.3e-21  Score=193.16  Aligned_cols=330  Identities=12%  Similarity=0.099  Sum_probs=214.2

Q ss_pred             cccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh
Q 037144          108 WISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA  187 (502)
Q Consensus       108 ~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s  187 (502)
                      |....+..++.+++.+|+.+.+|.....   .....++|+|+++++..++.+..+           +++.|+++.+.|..
T Consensus        80 Y~~~~G~~~LR~aiA~~l~~~~~~~~~~---~pe~I~it~G~~~al~~~~~~l~~-----------pGd~Vlv~~P~y~~  145 (431)
T d1m7ya_          80 FQDYHGLPAFKKAMVDFMAEIRGNKVTF---DPNHLVLTAGATSANETFIFCLAD-----------PGEAVLIPTPYYPG  145 (431)
T ss_dssp             CCCTTCCHHHHHHHHHHHHHHTTTSSCC---CGGGEEEEEHHHHHHHHHHHHHCC-----------TTCEEEEEESCCTT
T ss_pred             CcCCcCcHHHHHHHHHHHHHHhCCCCCC---CcceEEECCCHHHHHHHHHHHhcC-----------CCCEEEEeCCCchh
Confidence            4444566789999999999998843211   012689999999999877766543           67888898889988


Q ss_pred             HHHHHHH-cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC---ChhHHHHHHHHhC
Q 037144          188 FQKAAQI-VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD---PLKPLCDVAKQFG  263 (502)
Q Consensus       188 ~~~aa~~-~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id---pl~eI~~i~~~~g  263 (502)
                      +...+.. .|+   +++.++++.++++.+|++.+++++.+..+.+.++.+|+++.++|+||.+-   .+++|+++|+++|
T Consensus       146 ~~~~~~~~~g~---~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~nP~NPtG~~~s~~~l~~i~~~a~~~~  222 (431)
T d1m7ya_         146 FDRDLKWRTGV---EIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKG  222 (431)
T ss_dssp             HHHHTTTTTCC---EEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHhcCc---eeccccccchhcccccHHHhhhhhhhhhhccCcceEEEecCccccccccccccccccccccccccC
Confidence            8887764 467   89999998766689999999999999888888888999999999999984   4888899999999


Q ss_pred             CEEEeecccccccccCccchhhh---cCC------CCC--CeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCcccc
Q 037144          264 IWVHVDAAYAGSACICPEFRHFI---DGV------ECV--DSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQYL  331 (502)
Q Consensus       264 ~~lhVDaA~g~~~~~~~~~~~~~---~~~------~~a--Dsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl  331 (502)
                      +++++|.+|+...+..+.+....   ...      ...  -.+..+++|.++.| ..+|+++..+.. +.........+.
T Consensus       223 ~~vI~De~Y~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~RiG~~~~~~~~-i~~~~~~~~~~~  301 (431)
T d1m7ya_         223 IHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDM-VVAAATKMSSFG  301 (431)
T ss_dssp             CEEEEECTTGGGCCSSSCCCCHHHHTTTTTCSSSSSGGGGEEEEEESSSSSCCGGGCEEEEEESCHH-HHHHHHHHGGGS
T ss_pred             cceeecccccccccCCCCCCCHHHHhhhcccccccccCceEEEEecCcccccCCCCccceeccchhh-hHHHHHHHhccc
Confidence            99999999987654332221111   000      001  14566799999855 567877765443 222221111111


Q ss_pred             cCccCCCCCcccccCCCcccccCCCCCCchHHHHHHH--HhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeE
Q 037144          332 KNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIR--NFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSL  409 (502)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~--~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~  409 (502)
                      ...                      ......+.+.+.  ....+.+.+..+++.+.++.+.+.|++. |+++. +|+.++
T Consensus       302 ~~~----------------------~~~~~~~~a~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-gi~~~-~p~gg~  357 (431)
T d1m7ya_         302 LVS----------------------SQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKS-GISCL-NGNAGL  357 (431)
T ss_dssp             CCC----------------------HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-TCEEC-CCCSSS
T ss_pred             ccc----------------------ccccchhhhhhccchhhhhhhhhhhhhhhhhhhhhhhhhhcC-CcEEe-cCCcee
Confidence            000                      000011111111  1223456667777788888899999874 89987 455555


Q ss_pred             EEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcEEEEeeeE--CCEEEEEEEecCCCCcHH
Q 037144          410 VCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKVFMTHAIV--GGIYVLRFAAGNSMTMES  486 (502)
Q Consensus       410 v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~--~g~~~lR~~~~~~~t~~~  486 (502)
                      ++|.-.+.....                 ..    .+...++.++|.++ |.++.++..+  .+.+++|++++.  .+++
T Consensus       358 f~w~~l~~~~~~-----------------~~----~~~~~~l~~~ll~~~gV~v~PG~~F~~~~~~~~Ri~~a~--~~e~  414 (431)
T d1m7ya_         358 FCWVDMRHLLRS-----------------NT----FEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFAN--LPER  414 (431)
T ss_dssp             EEEEECGGGSSS-----------------SS----HHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEECSS--SCHH
T ss_pred             EEEEECcccccc-----------------Cc----ccCHHHHHHHHHHHCCEEEEeccccCCCCCCEEEEEeCc--CCHH
Confidence            554332211100                 00    11234566666654 5544443333  235799999863  4677


Q ss_pred             HHHHHHHHHHHHHHhC
Q 037144          487 HVRAAWTVVQEHLEAF  502 (502)
Q Consensus       487 di~~~~~~l~~~~~~~  502 (502)
                      +++.+++.|+++.+++
T Consensus       415 ~l~~al~rL~~~l~~~  430 (431)
T d1m7ya_         415 TLDLAMQRLKAFVGEY  430 (431)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHh
Confidence            8999999999987763

>d1iaya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Tomato (Lycopersicon esculentum) [TaxId: 4081]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Tomato (Lycopersicon esculentum) [TaxId: 4081]

Probab=99.86  E-value=8.1e-21  Score=193.04  Aligned_cols=326  Identities=13%  Similarity=0.103  Sum_probs=212.2

Q ss_pred             cccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh
Q 037144          108 WISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA  187 (502)
Q Consensus       108 ~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s  187 (502)
                      |....+..++.+++.+|+.+.+|..-..   .....++|+|+++++..++.+..+           +++.|+++.+.|.+
T Consensus        79 Y~~~~G~~~LR~aiA~~l~~~~~~~~~~---~~e~Ivit~G~~~al~~~~~~l~~-----------~Gd~Vlv~~P~y~~  144 (428)
T d1iaya_          79 FQDYHGLPEFRKAIAKFMEKTRGGRVRF---DPERVVMAGGATGANETIIFCLAD-----------PGDAFLVPSPYYPA  144 (428)
T ss_dssp             CCCTTCCHHHHHHHHHHHHHHTTTCSCC---CTTSCEEEEHHHHHHHHHHHHHCC-----------TTCEEEEESSCCTT
T ss_pred             CcCCcchHHHHHHHHHHHHHHhCCCCCC---ChhhEEEcCCHHHHHHHHHHHhCC-----------CCCEEEEccCCchH
Confidence            4444566789999999999998853210   012589999999998777665543           67888899889988


Q ss_pred             HHHHHHH-cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hhHHHHHHHHhC
Q 037144          188 FQKAAQI-VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LKPLCDVAKQFG  263 (502)
Q Consensus       188 ~~~aa~~-~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~eI~~i~~~~g  263 (502)
                      +...+.. .|+   +++.|+++..+++.+|+++++++++...+.+.++.+|+++.++|+||.+-+   +++|+++|++||
T Consensus       145 ~~~~~~~~~g~---~~v~v~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~nP~NPtG~~~s~~~~~~i~~~a~~~~  221 (428)
T d1iaya_         145 FNRDLRWRTGV---QLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHN  221 (428)
T ss_dssp             HHHHTTTTTCC---EEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTT
T ss_pred             HHHHHHHhcCC---eEEEeecccccccccccccccchhhhhhccCCCceEEEEccCCCcccccccccccchhheeeccCc
Confidence            8887764 477   899999987777999999999999887777777788899999999999855   788999999999


Q ss_pred             CEEEeecccccccccCccchhh---hc----CCCCC--CeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCcccccC
Q 037144          264 IWVHVDAAYAGSACICPEFRHF---ID----GVECV--DSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQYLKN  333 (502)
Q Consensus       264 ~~lhVDaA~g~~~~~~~~~~~~---~~----~~~~a--Dsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~  333 (502)
                      +++++|.+|+...+..+.+...   ..    ....-  ..+..+++|.++.| ..+|+++..++... ........+...
T Consensus       222 ~~vI~De~Y~~~~~~~~~~~s~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~GlRiG~~~~~~~~l~-~~~~~~~~~~~~  300 (428)
T d1iaya_         222 IHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFNDDVV-NCARKMSSFGLV  300 (428)
T ss_dssp             CEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGGGCEEEEEESCHHHH-HHHHHHHTTSCC
T ss_pred             EEEEecccccccccCcccccccccccchhhccccccceEEEEecCCCcccCCCcccccccccccchh-hhhhhhhccccc
Confidence            9999999998765533222111   00    01111  25677899988654 56788776555432 222111111000


Q ss_pred             ccCCCCCcccccCCCcccccCCCCCCchH-HHHHH---HHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeE
Q 037144          334 EATDQEPKEQEVGYKDWQITLCRRFRSLK-LWVVI---RNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSL  409 (502)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~~sr~~~al~-~~~~l---~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~  409 (502)
                      .                        .... ...+.   ...-.+.+++..+++.++++.+.+.|+.. |+++. +|+.++
T Consensus       301 ~------------------------~~~~~~~~a~l~~~~~~~~~~~~~~~~l~~r~~~~~~~L~~~-gi~~~-~p~gg~  354 (428)
T d1iaya_         301 S------------------------TQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVV-GIKCL-KNNAGL  354 (428)
T ss_dssp             C------------------------HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCBC-CCSSSS
T ss_pred             c------------------------cccccchhhhhhhhccccccccccccccchhHHHHHHHHHhC-CCEEe-cCCcce
Confidence            0                        0111 11111   11112345666667777888899999875 88876 555555


Q ss_pred             EEE-EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcEEEEeeeE--CCEEEEEEEecCCCCcH
Q 037144          410 VCF-RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKVFMTHAIV--GGIYVLRFAAGNSMTME  485 (502)
Q Consensus       410 v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~--~g~~~lR~~~~~~~t~~  485 (502)
                      ++| .+.+. ...                 ..    .+...++.++|.++ |.++.++..+  .+.+++|++++.  .++
T Consensus       355 f~w~~l~~~-~~~-----------------~~----~~~~~~l~~~Ll~~~gV~v~PG~~F~~~~~g~~Ris~a~--~~~  410 (428)
T d1iaya_         355 FCWMDLRPL-LRE-----------------ST----FDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFAN--MDD  410 (428)
T ss_dssp             EEEEECGGG-CSS-----------------SS----HHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECSS--SCH
T ss_pred             EEEEECccc-ccc-----------------CC----CCCHHHHHHHHHHhCCEEEEcchhcCCCCCCEEEEEeCC--CCH
Confidence            554 44321 000                 00    11123566666655 5544443333  346899999863  366


Q ss_pred             HHHHHHHHHHHHHHHh
Q 037144          486 SHVRAAWTVVQEHLEA  501 (502)
Q Consensus       486 ~di~~~~~~l~~~~~~  501 (502)
                      ++|+.++++|++++..
T Consensus       411 ~~l~~al~Rl~~~l~~  426 (428)
T d1iaya_         411 GTVDIALARIRRFVGV  426 (428)
T ss_dssp             HHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhh
Confidence            7899999999987653

>d1iuga_ c.67.1.3 (A:) Subgroup IV putative aspartate aminotransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Subgroup IV putative aspartate aminotransferase
species: Thermus thermophilus [TaxId: 274]

Probab=99.86  E-value=1.5e-20  Score=185.24  Aligned_cols=308  Identities=14%  Similarity=0.003  Sum_probs=200.7

Q ss_pred             ChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh--H
Q 037144          111 SPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA--F  188 (502)
Q Consensus       111 ~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s--~  188 (502)
                      ++.+.++.+++.+.++++++.+..       ..++++|||.++-.++.....           ++..+++...++++  +
T Consensus        28 ~~~f~~i~~~~~~~l~~ll~~~~~-------~i~~~gsgT~a~e~~~~nl~~-----------~g~~vlv~~~G~f~~~~   89 (348)
T d1iuga_          28 TEAAREVFLKARGLLREAFRTEGE-------VLILTGSGTLAMEALVKNLFA-----------PGERVLVPVYGKFSERF   89 (348)
T ss_dssp             SHHHHHHHHHHHHHHHHHHTCSSE-------EEEEESCHHHHHHHHHHHHCC-----------TTCEEEEEECSHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHhCCCCC-------EEEEeCchHHHHHHHHHhccc-----------ccccceeecchHHHHHH
Confidence            577888999999999999998654       578899999998666554432           34445555567764  6


Q ss_pred             HHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhC--CEE
Q 037144          189 QKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFG--IWV  266 (502)
Q Consensus       189 ~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g--~~l  266 (502)
                      .+.++.+|.   ++..++.++.+  ..+++++         ....+..|+.++.+|++|.+.|+++|+++|++++  .++
T Consensus        90 ~~~a~~~~~---~~~~~~~~~g~--~~~~~~~---------~~~~~~~v~~~h~eTstG~~~~i~~i~~~~~~~~~~~l~  155 (348)
T d1iuga_          90 YEIALEAGL---VVERLDYPYGD--TPRPEDV---------AKEGYAGLLLVHSETSTGALADLPALARAFKEKNPEGLV  155 (348)
T ss_dssp             HHHHHHTTC---EEEEEECCTTC--CCCTTTS---------CCSSCSEEEEESEETTTTEECCHHHHHHHHHHHCTTCEE
T ss_pred             HHHHHhcCc---ccccccccCCC--ccccccc---------cccCCCeeEEEecchhhhhhccHHHHHHHHHhhhcccee
Confidence            667788888   88888886543  3343321         1123457999999999999999999999999985  799


Q ss_pred             EeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccC
Q 037144          267 HVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVG  346 (502)
Q Consensus       267 hVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~  346 (502)
                      +||++.+.+..+.+-...      ++|.+++++|||+++|.|.|+++++++.. . .......|+.....        .+
T Consensus       156 ~vDavss~g~~~i~~d~~------~iD~~~~~sqK~l~gppG~~~v~~s~~~l-e-~~~~~~~~~dl~~~--------~~  219 (348)
T d1iuga_         156 GADMVTSLLVGEVALEAM------GVDAAASGSQKGLMCPPGLGFVALSPRAL-E-RLKPRGYYLDLARE--------LK  219 (348)
T ss_dssp             EEECTTTBTTBCCCSGGG------TCSEEEEESSSTTCCCSCEEEEEECHHHH-H-TCCCCSSTTCHHHH--------HH
T ss_pred             echhhhcccccccccccc------cCCEEEeccccceecCCceeeeeechHHH-h-hhcccccccchhhh--------hh
Confidence            999988776665543222      79999999999999999999999987643 2 22222223321100        00


Q ss_pred             CCcccccCCCCCC-----chHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCee-EEEEEeecCcch
Q 037144          347 YKDWQITLCRRFR-----SLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFS-LVCFRVTPSAVM  420 (502)
Q Consensus       347 ~~~~~~~~sr~~~-----al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~-~v~f~~~~~~~~  420 (502)
                         ..-....++.     ..++-.+++.+-.++ .+..++.......+++.+++. ++++.....++ +++|+++. +.+
T Consensus       220 ---~~~~~~~~~Tp~v~~i~~l~~aL~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-gl~~~~~~~s~~v~~~~~P~-g~~  293 (348)
T d1iuga_         220 ---AQKEGESAWTPAINLVLAVAAVLEEVLPRL-EEHLALKAWQNALLYGVGEEG-GLRPVPKRFSPAVAAFYLPE-GVP  293 (348)
T ss_dssp             ---HHTTTCCSSCCCHHHHHHHHHHHHHHGGGH-HHHHHHHHHHHHHHHHHHHHT-TCEESCSSBCTTCEEEECCT-TCC
T ss_pred             ---hhccCcccccccchHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHhhhhhhh-hhccChhhcCCeEEEEECCC-CCC
Confidence               0001111211     134445565543343 344444444555555555555 88886543333 56777743 210


Q ss_pred             hhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeE-CCEEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144          421 DKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIV-GGIYVLRFAAGNSMTMESHVRAAWTVVQEHL  499 (502)
Q Consensus       421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~-~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~  499 (502)
                                                 ..++.+.|.++|.+ +.++.. -....+|++.++. .+++|++++++.|+++.
T Consensus       294 ---------------------------~~~~~~~l~~~gi~-i~~G~~~l~~~~~RIg~mG~-~~~~d~~~~~~~l~~~l  344 (348)
T d1iuga_         294 ---------------------------YARVKEAFAQRGAV-IAGGQGPLKGKVFRLSLMGA-YDRYEALGVAGMFREVL  344 (348)
T ss_dssp             ---------------------------HHHHHHHHHTTTEE-CEECCGGGTTTEEEECCCSS-CCHHHHHHHHHHHHHHH
T ss_pred             ---------------------------HHHHHHHHHHCCeE-EEcCccccCCCEEEEeCCCC-CCHHHHHHHHHHHHHHH
Confidence                                       24667778778854 333221 1124899998876 45669999999999988


Q ss_pred             Hh
Q 037144          500 EA  501 (502)
Q Consensus       500 ~~  501 (502)
                      ++
T Consensus       345 ~~  346 (348)
T d1iuga_         345 EE  346 (348)
T ss_dssp             HH
T ss_pred             HH
Confidence            76

>d1bw0a_ c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Tyrosine aminotransferase (TAT)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.86  E-value=1.3e-20  Score=190.63  Aligned_cols=346  Identities=10%  Similarity=0.040  Sum_probs=221.8

Q ss_pred             HHHHHHHHhhcC-CCCcccccChhhHHHHHHHHHHHHHhcCCCCccCc-CCCCcEEEcCCchHHHHHHHHHHHHHHHHHh
Q 037144           91 GIVGEMLSSGFN-VVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLF-SGNGGGVIQGTTCEALLCTLTAARDRVLKKI  168 (502)
Q Consensus        91 ~~~~~~l~~~~n-~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~-~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~  168 (502)
                      ..+.+.+...++ .....|....+..++.+.+++|+.+.++....... ......++|+|+++++..++.+..+      
T Consensus        50 ~~~~~~~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~------  123 (412)
T d1bw0a_          50 AAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAICD------  123 (412)
T ss_dssp             HHHHHHHHHHHHTTCSSSCCCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCCGGGEEEESHHHHHHHHHHHHHCC------
T ss_pred             HHHHHHHHHHhhCCCCCCCCCCcCCHHHHHHHHHHHHHhcCcccccCCCCCCCeEEEecccccchhhhhhhhhc------
Confidence            444455544443 33345777777889999999999998765321100 1112689999999998877766543      


Q ss_pred             CccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144          169 GRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA  248 (502)
Q Consensus       169 ~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~  248 (502)
                           +++.|+++++++..+...++..|+   +++.+|+++++++..++++|++++.+.+      .+++++.++|+||.
T Consensus       124 -----~Gd~Vlv~~P~y~~~~~~~~~~G~---~~~~v~~~~~~~~~~~~~~l~~~~~~~~------~~~~l~np~NPtG~  189 (412)
T d1bw0a_         124 -----AGDYALVPQPGFPHYETVCKAYGI---GMHFYNCRPENDWEADLDEIRRLKDDKT------KLLIVTNPSNPCGS  189 (412)
T ss_dssp             -----TTCEEEEEESCCTHHHHHHHHTTC---EEEEEEEEGGGTTEECHHHHHHHCCTTE------EEEEEESSCTTTCC
T ss_pred             -----cccceeeeeccchhhhhhhhccCc---cccccccccccccchhhHHHHhhhhccc------cccccccccccccc
Confidence                 678888898999999999999999   9999999876678999999988775543      47888999999999


Q ss_pred             c---CChhHHHHHHHHhCCEEEeecccccccccCccchhh---hcCCCCCC-ee-EEccCCcCC-CCCcceEEEeeCchh
Q 037144          249 V---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF---IDGVECVD-SF-SFNPHKWLF-TTLDCCCLWVKDPSC  319 (502)
Q Consensus       249 i---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~---~~~~~~aD-si-~~~~hK~l~-~p~~~g~~~~r~~~~  319 (502)
                      +   +.+++|+++|++|++|+++|.+|....+........   ....+... .+ ..++.|.++ ....+|++++.+...
T Consensus       190 ~~~~~~~~~i~~~~~~~~~~vi~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~SK~~~~~G~RvG~~~~~~~~~  269 (412)
T d1bw0a_         190 NFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVVPGWRLGWLLYVDPHG  269 (412)
T ss_dssp             CCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTTTTSCGGGCCEEEEEECTTC
T ss_pred             cchhhhccccccccccCCeeeechhhHHHhccCCCCCccccccccccccccccccccccCccCccCCCCcccccccchhh
Confidence            8   557788888999999999999997765432211111   11112222 33 345889876 457788888764321


Q ss_pred             hhhhhcCCcccccCccCCCCCcccccCCCcccccCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 037144          320 LLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKR  398 (502)
Q Consensus       320 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~  398 (502)
                      ....+......+....                  ++-. .....+...+.....+.+.+..+++.+.++++.+.|.+.+|
T Consensus       270 ~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~l~~~~g  331 (412)
T d1bw0a_         270 NGPSFLEGLKRVGMLV------------------CGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIGECIG  331 (412)
T ss_dssp             SCHHHHHHHHHHHHHH------------------TCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHTTSTT
T ss_pred             cchhhhhhhccccccc------------------cCCchhhhhhcccccccccccccccccchhHHHHHHHHHHHHHhcC
Confidence            1000000000000000                  0000 00011112222224667888889999999999999988889


Q ss_pred             eEEecCCCeeEEEE-EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh-cCcEEEEeeeECCEEEEEE
Q 037144          399 FEVAFPRNFSLVCF-RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV-SGKVFMTHAIVGGIYVLRF  476 (502)
Q Consensus       399 ~~l~~~~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~g~~~lR~  476 (502)
                      +++. .|+.+++.| ++......                   ....    ..++.++|.+ .|.+++++..+++.+++|+
T Consensus       332 ~~~~-~p~gg~~l~~~~~~~~~~-------------------~~~~----~~~~~~~ll~~~gV~v~PG~~Fg~~g~iRi  387 (412)
T d1bw0a_         332 LAPT-MPRGAMYLMSRIDLEKYR-------------------DIKT----DVEFFEKLLEEENVQVLPGTIFHAPGFTRL  387 (412)
T ss_dssp             EEEC-CCCBTTEEEEEECGGGBS-------------------SCCS----HHHHHHHHHHHHCEECEEGGGGTCTTEEEE
T ss_pred             ceec-CCCCceEEEEeCChhhcC-------------------CCCC----HHHHHHHHHHhCCEEEEeccccCCCCeEEE
Confidence            9876 455555444 33211100                   0000    2344555544 4776666666666779999


Q ss_pred             EecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          477 AAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       477 ~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      |++   +++++++++++.|++.+++
T Consensus       388 s~~---~~~e~l~eal~Rl~~~l~~  409 (412)
T d1bw0a_         388 TTT---RPVEVYREAVERIKAFCQR  409 (412)
T ss_dssp             ECC---SCHHHHHHHHHHHHHHHHH
T ss_pred             EEc---CCHHHHHHHHHHHHHHHHh
Confidence            986   4677999999999887765

>d1xi9a_ c.67.1.1 (A:) Putative alanine aminotransferase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative alanine aminotransferase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=99.85  E-value=8.4e-21  Score=190.87  Aligned_cols=337  Identities=11%  Similarity=0.058  Sum_probs=221.6

Q ss_pred             HHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHh
Q 037144           89 VAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKI  168 (502)
Q Consensus        89 ~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~  168 (502)
                      +|..+.+.+...++.....|....+..++.+.+.+|+.+.+|.+...     ...++|+|+++++..++.+..+      
T Consensus        47 ~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~-----~~i~i~~G~~~~~~~~~~~~~~------  115 (395)
T d1xi9a_          47 PPEHMKEAYCKAIKEGHNYYGDSEGLPELRKAIVEREKRKNGVDITP-----DDVRVTAAVTEALQLIFGALLD------  115 (395)
T ss_dssp             CCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCG-----GGEEEESHHHHHHHHHHHHHCC------
T ss_pred             CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhcccccccc-----cccccccccchhhhhhhhhhcC------
Confidence            45566777777775555568777788999999999999999986432     2688899998888766655443      


Q ss_pred             CccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144          169 GRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA  248 (502)
Q Consensus       169 ~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~  248 (502)
                           +++.|++..+++..+...++..|.   +++.+|.+..+++.+|++++++++.+.+      .+|+++.++|+||.
T Consensus       116 -----~Gd~vlv~~P~y~~~~~~~~~~g~---~~v~v~~~~~~~~~~d~~~~~~~~~~~~------~~v~l~~P~NPTG~  181 (395)
T d1xi9a_         116 -----PGDEILVPGPSYPPYTGLVKFYGG---KPVEYRTIEEEDWQPDIDDIRKKITDRT------KAIAVINPNNPTGA  181 (395)
T ss_dssp             -----TTCEEEEEESCCHHHHHHHHHTTC---EEEEEEEEGGGTSEECHHHHHHHCCTTE------EEEEEESSCTTTCC
T ss_pred             -----CCCEEEEcCCccccchhhhhhcCC---EEEEEeccccccccchHHHHHHhhcccc------cEEEecCCCCCccc
Confidence                 677888888999999999999999   9999998765578999999999886543      37888889999999


Q ss_pred             cC---ChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCC-eeEEccCCcCCCC-CcceEEEeeCchhhhhh
Q 037144          249 VD---PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVD-SFSFNPHKWLFTT-LDCCCLWVKDPSCLLST  323 (502)
Q Consensus       249 id---pl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aD-si~~~~hK~l~~p-~~~g~~~~r~~~~l~~~  323 (502)
                      +-   .+++|+++|++|++|++.|.+|.......+..... .-..... .+..+++|.++.| ..+|++++.+.......
T Consensus       182 ~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~-~~~~~~~vi~~~S~SK~~~~~GlRvG~~~~~~~~~~~~~  260 (395)
T d1xi9a_         182 LYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPG-SLTKDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKLSE  260 (395)
T ss_dssp             CCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHH-HHCSSSCEEEEEESTTTTCCGGGCCEEEEEECTTCTTHH
T ss_pred             hhhHHHHHHHHhhhhhcCeeEEeccccccccccccccchh-hcCCCCCEEEEeCcchhcccchhhcEeeEecCHHHHHHH
Confidence            94   46788889999999999999997655432211111 1011222 3445799988754 56788776543221111


Q ss_pred             hcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHH--hcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 037144          324 LSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRN--FGVANLRNFIRSHVGMAKLFERLVTSDKRFEV  401 (502)
Q Consensus       324 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~--~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l  401 (502)
                      +......+....                   . ....+...++...  .+.+.+++..+.+.++++.+.+.|++++++.+
T Consensus       261 ~~~~~~~~~~~~-------------------~-~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~  320 (395)
T d1xi9a_         261 VREAIDRLARIR-------------------L-CPNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYIYKRLNEIPGIST  320 (395)
T ss_dssp             HHHHHHHHHHHT-------------------C-CSCSHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHTSTTEEC
T ss_pred             HHHHHHHhhcCC-------------------C-CcCHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhCCCcee
Confidence            100000010000                   0 0011222222222  24677888888899999999999999977766


Q ss_pred             ecCCCeeEEEE-EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeEC--CEEEEEEE
Q 037144          402 AFPRNFSLVCF-RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVG--GIYVLRFA  477 (502)
Q Consensus       402 ~~~~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lR~~  477 (502)
                      . +|+.+++.| .+.....                      .  +  ..++..++. +.|.++.++..+.  +.+++|++
T Consensus       321 ~-~p~gg~~~~~~l~~~~~----------------------~--~--~~~~~~~ll~~~gV~v~PG~~Fg~~~~~~~Ris  373 (395)
T d1xi9a_         321 T-KPQGAFYIFPKIEVGPW----------------------K--N--DKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAV  373 (395)
T ss_dssp             C-CCCBSSEECCEECSCSC----------------------S--S--HHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEE
T ss_pred             c-CCCeeEEEeEECCCCCC----------------------C--C--HHHHHHHHHHhCCEEEEcChhhCCCCCCEEEEE
Confidence            4 555454443 3432110                      0  0  123333333 3476655544442  35689999


Q ss_pred             ecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          478 AGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       478 ~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      ++   +++++++++++.|+++.++
T Consensus       374 ~~---~~~e~l~eal~rl~~~l~e  394 (395)
T d1xi9a_         374 FL---PPIEILEEAMDRFEKFMKE  394 (395)
T ss_dssp             CC---SCHHHHHHHHHHHHHHHHH
T ss_pred             ec---CCHHHHHHHHHHHHHHHhc
Confidence            85   4677999999999988764

>d1d2fa_ c.67.1.3 (A:) Modulator in mal gene expression, MalY {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Modulator in mal gene expression, MalY
species: Escherichia coli [TaxId: 562]

Probab=99.85  E-value=2.5e-20  Score=185.00  Aligned_cols=333  Identities=12%  Similarity=0.033  Sum_probs=211.2

Q ss_pred             HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144           90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG  169 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~  169 (502)
                      |..+.+.+...+......|....+ .++.+.+.+|+.+.+|.+-+.     ..+++|+|+++++..++.+..+       
T Consensus        14 p~~i~eal~~~~~~~~~~Y~~~~g-~~lr~~ia~~~~~~~g~~~~~-----~~i~it~G~~~~l~~~~~~l~~-------   80 (361)
T d1d2fa_          14 APCIIEALNQRLMHGVFGYSRWKN-DEFLAAIAHWFSTQHYTAIDS-----QTVVYGPSVIYMVSELIRQWSE-------   80 (361)
T ss_dssp             CHHHHHHHHHHHTTCCCCCCCSCC-HHHHHHHHHHHHHHSCCCCCG-----GGEEEESCHHHHHHHHHHHSSC-------
T ss_pred             CHHHHHHHHHHHhCCCCCCCCCCC-HHHHHHHHHHHHHHhCCCCCc-----ceEEEeCCHHHHHHHHhhhccc-------
Confidence            344556666655444445655555 578889999999999985331     2689999999988665554432       


Q ss_pred             ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCC-CCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144          170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTK-SSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA  248 (502)
Q Consensus       170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~-~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~  248 (502)
                          +++.|++..+.|..+..+++..|.   .++.++.+. ++++.+|++.+++.+.+.     ++.+|+++.++|+||.
T Consensus        81 ----~gd~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~d~~~~~~~~~~~-----~~~~i~l~~p~NPTG~  148 (361)
T d1d2fa_          81 ----TGEGVVIHTPAYDAFYKAIEGNQR---TVMPVALEKQADGWFCDMGKLEAVLAKP-----ECKIMLLCSPQNPTGK  148 (361)
T ss_dssp             ----TTCEEEEEESCCHHHHHHHHHTTC---EEEEEECEECSSSEECCHHHHHHHHTST-----TEEEEEEESSCTTTCC
T ss_pred             ----cccccccccccccchhHHHHhhcc---eEEeecccccccccccccccchhhcccC-----CceeEEeccccccccc
Confidence                677888888999999999999999   898888764 235679999999988542     2447888889999998


Q ss_pred             cCC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCC-eeEEccCCcCCCC-CcceEEEeeCchhhhhh
Q 037144          249 VDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVD-SFSFNPHKWLFTT-LDCCCLWVKDPSCLLST  323 (502)
Q Consensus       249 idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aD-si~~~~hK~l~~p-~~~g~~~~r~~~~l~~~  323 (502)
                      +-+   +++|+++|+++|+++++|.+|....+....... +.....-+ .+..++.|.++.| ...|++++.+.......
T Consensus       149 ~~s~~~~~~i~~~~~~~~~~lI~De~y~~~~~~~~~~~~-~~~~~~~~~v~~~s~SK~~~~~g~R~g~~~~~~~~~~~~~  227 (361)
T d1d2fa_         149 VWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIP-WSNVARGDWALLTSGSKSFNIPALTGAYGIIENSSSRDAY  227 (361)
T ss_dssp             CCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCC-GGGTCCSSEEEEECSHHHHTCGGGCCEEEEECSHHHHHHH
T ss_pred             ccchhhhhhhhhhhhhhheeeeecccccccccccccccc-cccccccccccccccccccccccccceeeecchhHHHHHH
Confidence            854   778999999999999999999776543221111 11111223 4556678877644 56777777655332221


Q ss_pred             hcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHH--hcHHHHHHHHHHHHHHHHHHHHHHhc-CCCeE
Q 037144          324 LSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRN--FGVANLRNFIRSHVGMAKLFERLVTS-DKRFE  400 (502)
Q Consensus       324 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~--~g~~g~~~~~~~~~~la~~l~~~l~~-~~~~~  400 (502)
                      ...   +.....                  .+.. ....+.+++..  ...+..++......++++.+.+.+.+ .+++.
T Consensus       228 ~~~---~~~~~~------------------~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~  285 (361)
T d1d2fa_         228 LSA---LKGRDG------------------LSSP-SVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELN  285 (361)
T ss_dssp             HHH---HHTTSC------------------CCSC-CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSSCC
T ss_pred             hhh---cccccc------------------cccc-hhhhHHHHHHHhhccchhhhcccccchhhHHHHHHHhhhhccccc
Confidence            111   000000                  0000 11112222222  24555666767777777777776643 45666


Q ss_pred             EecCCCeeEEEE-EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcEEEEeeeEC--CEEEEEE
Q 037144          401 VAFPRNFSLVCF-RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKVFMTHAIVG--GIYVLRF  476 (502)
Q Consensus       401 l~~~~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~--g~~~lR~  476 (502)
                      +. +|+.+++.| .+.+...                         +  ..++.++|.++ |.+++++..+.  +..++|+
T Consensus       286 ~~-~p~gg~~~~~~l~~~~~-------------------------~--~~~~~~~Ll~~~gv~v~pG~~F~~~~~~~vRi  337 (361)
T d1d2fa_         286 WQ-IPQSTYLAWLDLRPLNI-------------------------D--DNALQKALIEQEKVAIMPGYTYGEEGRGFVRL  337 (361)
T ss_dssp             CC-CCSBCSEEEEECGGGCC-------------------------C--HHHHHHHHHHTTCEECEEGGGGCGGGTTEEEE
T ss_pred             cc-ccCceeEEEEEccCCCC-------------------------C--HHHHHHHHHHhCCEEEEeccccCCCCCCEEEE
Confidence            54 455555444 4433211                         0  23566666555 76554443332  4568999


Q ss_pred             EecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          477 AAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       477 ~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      |+.   +++++++++++.|.++.++
T Consensus       338 s~~---~~~e~l~~al~rl~~~l~~  359 (361)
T d1d2fa_         338 NAG---CPRSKLEKGVAGLINAIRA  359 (361)
T ss_dssp             ECC---SCHHHHHHHHHHHHHHHHH
T ss_pred             EEc---CCHHHHHHHHHHHHHHHHh
Confidence            975   4678999999999988775

>d1svva_ c.67.1.1 (A:) Low-specificity threonine aldolase {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Leishmania major [TaxId: 5664]

Probab=99.84  E-value=5.4e-20  Score=177.89  Aligned_cols=325  Identities=11%  Similarity=0.082  Sum_probs=199.6

Q ss_pred             CCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHH
Q 037144           87 SSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLK  166 (502)
Q Consensus        87 ~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~  166 (502)
                      ...|.++ +.+..........|..    .+..+++++.+++++|.+..       .++||+|||+||+.++.....    
T Consensus        11 g~~P~v~-eAl~~~~~~~~~~y~~----~~~~~~lr~~ia~~~g~~~~-------~v~~tsggtean~~a~~~~~~----   74 (340)
T d1svva_          11 GMHPKIL-DLMARDNMTQHAGYGQ----DSHCAKAARLIGELLERPDA-------DVHFISGGTQTNLIACSLALR----   74 (340)
T ss_dssp             CCCHHHH-HHHHHHTTCCCCSTTC----SHHHHHHHHHHHHHHTCTTS-------EEEEESCHHHHHHHHHHHHCC----
T ss_pred             CCCHHHH-HHHHHHhhcCCCCCCC----CHHHHHHHHHHHHHhCCCcc-------eEEEcCCHHHHHHHHHHHHhh----
Confidence            3356544 4444433222333433    34556788889999999864       689999999999988876654    


Q ss_pred             HhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccc
Q 037144          167 KIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAI  246 (502)
Q Consensus       167 ~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~  246 (502)
                             ++..++.....|.++.......+.+. ....+...   ....+.+...++..........+..++.....+..
T Consensus        75 -------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (340)
T d1svva_          75 -------PWEAVIATQLGHISTHETGAIEATGH-KVVTAPCP---DGKLRVADIESALHENRSEHMVIPKLVYISNTTEV  143 (340)
T ss_dssp             -------TTEEEEEETTSHHHHSSTTHHHHTTC-CEEEECCT---TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESSCTT
T ss_pred             -------hccccccccccceeeeecccccccce-eeeecccc---cccccchhHHHHhhhhhcccCCcceeeeecccccc
Confidence                   56677778888888766544444422 33333322   23556666666666555444445555555555566


Q ss_pred             ccc---CChhHHHHHHHHhCCEEEeecccccccccCccchhhhc-CCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhh
Q 037144          247 TAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFID-GVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLS  322 (502)
Q Consensus       247 G~i---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~-~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~  322 (502)
                      |.+   +++..+.++|+++|.++|+|+++++.....+....... .....+..++.++|.+..+.  +............
T Consensus       144 ~~~~~~~~~~~~~~~~~~~g~~~~~d~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~  221 (340)
T d1svva_         144 GTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKAGGMFG--EALIILNDALKPN  221 (340)
T ss_dssp             SCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCSEEEEECTTTTCSSC--EEEEECSGGGCTT
T ss_pred             cccccHHHhhhhhcccccccceeeeeccceeeeecccccccccccccccceeeecCCcccccccc--ccccccchhhhhh
Confidence            665   45667789999999999999999877665432211100 01134567777777665543  3333322211110


Q ss_pred             hhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHH-HhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 037144          323 TLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIR-NFGVANLRNFIRSHVGMAKLFERLVTSDKRFEV  401 (502)
Q Consensus       323 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~-~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l  401 (502)
                      ..    ...                   ....+....+..+++++. .+.........++...+++++.+.+++. |+++
T Consensus       222 ~~----~~~-------------------~~~~~~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~  277 (340)
T d1svva_         222 AR----HLI-------------------KQRGALMAKGWLLGIQFEVLMKDNLFFELGAHSNKMAAILKAGLEAC-GIRL  277 (340)
T ss_dssp             HH----HHH-------------------HHTTCCCTTTHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHT-TCCB
T ss_pred             hh----hhc-------------------ccccCccchhhHHHHHHHHHhhhhHHHHHHHHHHHHHhhhHHHHhcC-CCee
Confidence            00    000                   000011112222333333 3455667778888899999999999986 8998


Q ss_pred             ecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCC
Q 037144          402 AFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNS  481 (502)
Q Consensus       402 ~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~  481 (502)
                      +.|++.+++.+.+.+                                 ...++|.+++.+...++...+..++|+|+ ++
T Consensus       278 ~~p~~~~~v~~~~~~---------------------------------~~~~~l~~~~~~~~~~~~~~~~~~vR~s~-~~  323 (340)
T d1svva_         278 AWPSASNQLFPILEN---------------------------------TMIAELNNDFDMYTVEPLKDGTCIMRLCT-SW  323 (340)
T ss_dssp             SSCCSSSEECBEEEH---------------------------------HHHHHHTTTEECEEEEEETTTEEEEEEEC-CT
T ss_pred             ecCCCceEEEEeCCH---------------------------------HHHHHHHHhhhhhcccccCCCCcEEEEEC-CC
Confidence            877788877665532                                 12344555565555555567899999997 57


Q ss_pred             CCcHHHHHHHHHHHHHH
Q 037144          482 MTMESHVRAAWTVVQEH  498 (502)
Q Consensus       482 ~t~~~di~~~~~~l~~~  498 (502)
                      .+|++|||+++++|+++
T Consensus       324 ~~t~edid~~l~~l~~l  340 (340)
T d1svva_         324 ATEEKECHRFVEVLKRL  340 (340)
T ss_dssp             TCCHHHHHHHHHHHHHC
T ss_pred             CCCHHHHHHHHHHHhcC
Confidence            88999999999999874

>d1wyua1 c.67.1.7 (A:1-437) Glycine dehydrogenase (decarboxylating) subunit 1 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Glycine dehydrogenase subunits (GDC-P)
domain: Glycine dehydrogenase (decarboxylating) subunit 1
species: Thermus thermophilus [TaxId: 274]

Probab=99.84  E-value=9e-19  Score=175.03  Aligned_cols=400  Identities=14%  Similarity=0.095  Sum_probs=246.7

Q ss_pred             ccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHhhcCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCccccc
Q 037144            3 QAYAQEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQEHIVPGITHWQSPNYFAY   82 (502)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~   82 (502)
                      |.++++++++++.+    -  ++++++  .+..+ |+.++ .-+..+|+ +.|..++++++.++...+..-  ...|++-
T Consensus         5 p~s~~d~~~mL~~i----G--~~s~~d--l~~~I-P~~~~-~~~~~lp~-~~sE~e~~r~~~~ls~kN~~~--~~~fig~   71 (437)
T d1wyua1           5 PHTEEEIREMLRRV----G--AASLED--LFAHL-PKEIL-SPPIDLPE-PLPEWKVLEELRRLAAQNLPA--HKAFLGG   71 (437)
T ss_dssp             CCCHHHHHHHHHHH----T--CSSTGG--GGTTS-CGGGS-SCCCCCCC-CCCHHHHHHHHHHHHHTSCCC--TTCCCCS
T ss_pred             CcCHHHHHHHHHHc----C--CCCHHH--HHHhc-cHHHh-cCCCCCCC-CCCHHHHHHHHHHHHhCCCCc--CccccCc
Confidence            45667777544432    1  112222  23344 66664 33566775 589999999999987666422  1235553


Q ss_pred             CCCCCCHHHHHHHHHH--hhcCCC-CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHH
Q 037144           83 FPATSSVAGIVGEMLS--SGFNVV-GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTA  159 (502)
Q Consensus        83 ~~~~~~~~~~~~~~l~--~~~n~~-~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~  159 (502)
                      -...--.|+.+.+++.  ..++.. ...-+.+-+.-++-.+...||+++.|++...        .-...|+.|.+.|+.+
T Consensus        72 G~~~~~~p~~i~~~~~~~~~~t~ytPyqpE~sQG~Lq~l~e~q~~l~eltGmd~~n--------~s~~~ga~a~~~~~~~  143 (437)
T d1wyua1          72 GVRSHHVPPVVQALAARGEFLTAYTPYQPEVSQGVLQATFEYQTMIAELAGLEIAN--------ASMYDGATALAEGVLL  143 (437)
T ss_dssp             SCCCCCCCHHHHHHHTSHHHHHCCSCCSGGGCHHHHHHHHHHHHHHHHHHTSSEEC--------SCBSSHHHHHHHHHHH
T ss_pred             ccCCceeCHHHHHHHhChhhhhhCCCcchHHHHHHHHHHHHHHHHHHHhhCCCccc--------cCchHHHHHHHHHHHH
Confidence            3333334455544332  123222 1233455666677778889999999997531        1122456677788887


Q ss_pred             HHHHHHHHhCccCCCCeEEEeCCCCchhH----HHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccE
Q 037144          160 ARDRVLKKIGRENISKLVVYSSDQTHCAF----QKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPL  235 (502)
Q Consensus       160 a~~~~~~~~~~~~~~~~~v~~s~~~H~s~----~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~  235 (502)
                      ++...         ++..++++...|.+.    ...|+..|+   +++.+|.+.+   ..+.++    +.++      ..
T Consensus       144 ~~~~~---------~~~~~~v~~~~~p~~~~v~~t~a~~~g~---~vv~v~~~~~---~~~~~~----~~~~------~A  198 (437)
T d1wyua1         144 ALRET---------GRMGVLVSQGVHPEYRAVLRAYLEAVGA---KLLTLPLEGG---RTPLPE----VGEE------VG  198 (437)
T ss_dssp             HHHHH---------TCCEEEEETTSCHHHHHHHHHHHHHTTC---EEEEECCBTT---BCCCCC----CCTT------EE
T ss_pred             HHhhh---------cccccccccccChHHhhhhhhhccccee---eEEeeecccc---cchhhh----hccc------ee
Confidence            76542         233566788888653    345678899   9999998742   333222    2233      35


Q ss_pred             EEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcc-----e
Q 037144          236 FLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDC-----C  310 (502)
Q Consensus       236 ~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~-----g  310 (502)
                      .|+++.++| .|.+.++++|++++++.|..+.+|+.--+.....+ ....     ++|.++.+ ||.|+.|.+.     |
T Consensus       199 avmi~~Pnt-~G~~ed~~~i~~~~h~~G~l~~~~ad~~al~~l~~-Pg~~-----GaDi~~g~-~q~fg~p~g~GGP~~G  270 (437)
T d1wyua1         199 AVVVQNPNF-LGALEDLGPFAEAAHGAGALFVAVADPLSLGVLKP-PGAY-----GADIAVGD-GQSLGLPMGFGGPHFG  270 (437)
T ss_dssp             EEEEESSCT-TSBCCCHHHHHHHHHHTTCEEEEECCTTGGGTBCC-HHHH-----TCSEEEEE-CTTTTCCCGGGCSCCE
T ss_pred             EEEEccccc-cccccchHHHHHHhhhccceEEeeechhhhhcccc-cccc-----ccceEeec-cceeccccCCCcCccc
Confidence            788888864 69999999999999999998888875433222222 2232     89999999 7777777554     8


Q ss_pred             EEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCccccc-----------CCCCC-----CchHHHHHHHHhcHHH
Q 037144          311 CLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQIT-----------LCRRF-----RSLKLWVVIRNFGVAN  374 (502)
Q Consensus       311 ~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~-----------~sr~~-----~al~~~~~l~~~g~~g  374 (502)
                      ++.++++-  .   ...|..+.....+   ..+...+. ++++           .|+-.     -++..|..+..+|.+|
T Consensus       271 ~~a~~~~l--~---r~lPgrivg~s~d---~~G~~~~~-l~lqtreqhIrRekatsnict~q~l~a~~a~~Y~~~lG~~G  341 (437)
T d1wyua1         271 FLATKKAF--V---RQLPGRLVSETVD---VEGRRGFI-LTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGPEG  341 (437)
T ss_dssp             EEEECGGG--G---GGCCSCCEEEEEB---TTSCEEEE-ECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHHHHH
T ss_pred             cccccchh--h---ccccccccccccc---cCCcccce-eecccccccccccccccchhhHHHHHHHHHHHHhhhcCccc
Confidence            88887542  1   2234443322111   01111110 0000           11111     2346677778899999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCeEEecC-CCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHH
Q 037144          375 LRNFIRSHVGMAKLFERLVTSDKRFEVAFP-RNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLE  453 (502)
Q Consensus       375 ~~~~~~~~~~la~~l~~~l~~~~~~~l~~~-~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  453 (502)
                      ++++.++...+|+|+.++|.+++|++++.+ +.+..+++.....                              ...+.+
T Consensus       342 L~~ia~~a~~~A~yl~~~L~~~~g~~~~~~~~~f~ef~v~~~~~------------------------------~~~i~k  391 (437)
T d1wyua1         342 LREVALKSVEMAHKLHALLLEVPGVRPFTPKPFFNEFALALPKD------------------------------PEAVRR  391 (437)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTSTTCEECSCSSBCSEEEEECSSC------------------------------HHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCeeccCCCCeeeEEEEECCCC------------------------------HHHHHH
Confidence            999999999999999999999999997643 3445555544221                              235667


Q ss_pred             HHHhcCcEEEEeee---ECCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144          454 SINVSGKVFMTHAI---VGGIYVLRFAAGNSMTMESHVRAAWTVVQEH  498 (502)
Q Consensus       454 ~l~~~g~~~~~~~~---~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~  498 (502)
                      +|.+.|..  .++.   +.+...+.++++.. ++++|||+++++|+++
T Consensus       392 ~L~d~G~~--~~~~~~~~~~~~~lli~~TE~-~tkeeiD~~v~al~ei  436 (437)
T d1wyua1         392 ALAERGFH--GATPVPREYGENLALFAATEL-HEEEDLLALREALKEV  436 (437)
T ss_dssp             HHHHTTCC--CCEECCTTSCSSEEEEECCTT-CCHHHHHHHHHHHHHH
T ss_pred             HHHhCCCC--CCcccccCCCCCeEEEecCCC-CCHHHHHHHHHHHHHh
Confidence            77777863  2222   22346788998754 6677999999999886

>d1m6sa_ c.67.1.1 (A:) Low-specificity threonine aldolase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.84  E-value=4.9e-21  Score=187.20  Aligned_cols=325  Identities=12%  Similarity=0.089  Sum_probs=192.5

Q ss_pred             HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144           90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG  169 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~  169 (502)
                      |. +.+.+.+. +.....|..+|...++|++    +++++|.+.         +++++|||+||+.++.+++.       
T Consensus        14 p~-v~~A~~~a-~~g~~~yg~~p~~~~le~~----lA~~~G~~~---------~~~~~sGt~A~~~al~a~~~-------   71 (343)
T d1m6sa_          14 EE-MRKAMAQA-EVGDDVYGEDPTINELERL----AAETFGKEA---------ALFVPSGTMGNQVSIMAHTQ-------   71 (343)
T ss_dssp             HH-HHHHHHTC-CCCCGGGTCCHHHHHHHHH----HHHHTTCSE---------EEEESCHHHHHHHHHHHHCC-------
T ss_pred             HH-HHHHHHhh-hcCCcccCCCHHHHHHHHH----HHHHHCCCe---------EEEeCCHHHHHHHHHHHHhc-------
Confidence            44 33444332 3334457777888877765    678889763         68999999999999887765       


Q ss_pred             ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEec-CCccccc
Q 037144          170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATV-GTTAITA  248 (502)
Q Consensus       170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~-gtt~~G~  248 (502)
                          +++.+++....|++........+.+...++.++.+   .+..|++.+++.+...++....+..++.+. .++..|.
T Consensus        72 ----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  144 (343)
T d1m6sa_          72 ----RGDEVILEADSHIFWYEVGAMAVLSGVMPHPVPGK---NGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGR  144 (343)
T ss_dssp             ----TTCEEEEETTCHHHHSSTTHHHHHTCCEEEEECEE---TTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSB
T ss_pred             ----cCCceeccccccceeeecccccccccceeeccccc---cCccCHHHHHHhhhhhhcccccccccccccccccCCce
Confidence                45666677778877654333332222255555544   458899999999987766555444444444 5555555


Q ss_pred             c---CChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhc
Q 037144          249 V---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLS  325 (502)
Q Consensus       249 i---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~  325 (502)
                      +   +++++|.++|+++|+++|+|++++++......... .......+..+++.+|.++...+.+.+..  .........
T Consensus       145 ~~~~~~l~~i~~~~~~~g~~~~~D~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~  221 (343)
T d1m6sa_         145 VVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPV-KEYAGYADSVMFCLSKGLCAPVGSVVVGD--RDFIERARK  221 (343)
T ss_dssp             CCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCH-HHHHHTCSEEEEESSSTTCCSSCEEEEEC--HHHHHHHHH
T ss_pred             ecCHHHHHHHHHHHHhcCeEEEeccccccccccccccch-hhhcccccccccccccccccccccccccc--HHHHhhhHh
Confidence            5   45667777889999999999999776543211111 01112566788888887776654444332  222111110


Q ss_pred             CCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC
Q 037144          326 TNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR  405 (502)
Q Consensus       326 ~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~  405 (502)
                      .. .+....                   .+......+++........    ...+...+++.++.+.+.++++.....+.
T Consensus       222 ~~-~~~~~~-------------------~~~~~~~~a~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (343)
T d1m6sa_         222 AR-KMLGGG-------------------MRQAGVLAAAGIIALTKMV----DRLKEDHENARFLALKLKEIGYSVNPEDV  277 (343)
T ss_dssp             HH-HHHTCC-------------------CSSTHHHHHHHHHHHHHSS----TTHHHHHHHHHHHHHHHHHHTCBCCGGGC
T ss_pred             hC-cccccc-------------------cchhHHHHHhhhhhhhhhH----HHHHHHHHHHHHhhhHHHHhccCccCCCC
Confidence            00 000000                   0000011122221111112    23334455566666666666566555556


Q ss_pred             CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcH
Q 037144          406 NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTME  485 (502)
Q Consensus       406 ~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~  485 (502)
                      ..+++++.+.....                           ...+|.++|.++|+.+ .+.   +..++|++++ ..+++
T Consensus       278 ~~~~v~~~~~~~~~---------------------------~a~~l~~~L~~~Gi~v-~~~---~~~~iRi~~~-~~~t~  325 (343)
T d1m6sa_         278 KTNMVILRTDNLKV---------------------------NAHGFIEALRNSGVLA-NAV---SDTEIRLVTH-KDVSR  325 (343)
T ss_dssp             CSSEEEEECTTSSS---------------------------CHHHHHHHHHHHTEEC-EEE---ETTEEEEECC-TTSCH
T ss_pred             CceEEEEEeCCCcc---------------------------cHHHHHHHHHHCCCEE-ecC---CCCEEEEECC-CCCCH
Confidence            67788887654321                           1346778888889643 332   2347999874 77888


Q ss_pred             HHHHHHHHHHHHHHHhC
Q 037144          486 SHVRAAWTVVQEHLEAF  502 (502)
Q Consensus       486 ~di~~~~~~l~~~~~~~  502 (502)
                      ||||+++++|++++++|
T Consensus       326 edid~~v~~l~~v~~~~  342 (343)
T d1m6sa_         326 NDIEEALNIFEKLFRKF  342 (343)
T ss_dssp             HHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHh
Confidence            89999999999999874

>d1c7na_ c.67.1.3 (A:) Cystalysin {Treponema denticola [TaxId: 158]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystalysin
species: Treponema denticola [TaxId: 158]

Probab=99.83  E-value=1e-19  Score=182.84  Aligned_cols=334  Identities=11%  Similarity=0.025  Sum_probs=215.8

Q ss_pred             CHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHH
Q 037144           88 SVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKK  167 (502)
Q Consensus        88 ~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~  167 (502)
                      .+|..+.+.+...++.+...|..+  ..++.+.+++|+++.+|++.+.     ...++|+|+++++..++.+..+     
T Consensus        44 ~~p~~v~~al~~~~~~~~~~Y~~g--~~~Lr~aia~~~~~~~g~~~~~-----~~I~vt~G~~~al~~~~~~~~~-----  111 (394)
T d1c7na_          44 KNPPELIEGLKKYLDETVLGYTGP--TEEYKKTVKKWMKDRHQWDIQT-----DWIINTAGVVPAVFNAVREFTK-----  111 (394)
T ss_dssp             CCCHHHHHHHHHHHHHCCCSSBCC--CHHHHHHHHHHHHHHHCCCCCG-----GGEEEESSHHHHHHHHHHHHCC-----
T ss_pred             CCCHHHHHHHHHHHhCCCcCCCCC--CHHHHHHHHHHHHHhcCCCCCC-----cceEeeccchhhhhhhhccccc-----
Confidence            345556666666665555566543  4689999999999999985332     2689999999999888776544     


Q ss_pred             hCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCC-CCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccc
Q 037144          168 IGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTK-SSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAI  246 (502)
Q Consensus       168 ~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~-~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~  246 (502)
                            +++.|++....++.....+...|.   ..+.++... +..+.+|.+.++.++...     .+.+++++.++|+|
T Consensus       112 ------pgd~vi~~~p~~~~~~~~~~~~g~---~~v~~~~~~~~~~~~~d~~~~~~~~~~~-----~~~~i~l~~P~NPT  177 (394)
T d1c7na_         112 ------PGDGVIIITPVYYPFFMAIKNQER---KIIECELLEKDGYYTIDFQKLEKLSKDK-----NNKALLFCSPHNPV  177 (394)
T ss_dssp             ------TTCEEEECSSCCTHHHHHHHTTTC---EEEECCCEEETTEEECCHHHHHHHHTCT-----TEEEEEEESSBTTT
T ss_pred             ------cccccccccCcccchhhHHhhhhh---cccccccccccccccchhhhhhhhhccc-----cceEEEeccccccc
Confidence                  678888888899999999999998   888777643 335678999888876432     23478889999999


Q ss_pred             cccC---ChhHHHHHHHHhCCEEEeecccccccccCccchhhhc---CCCCCCeeEEccCCcCCC-CCcceEEEeeCchh
Q 037144          247 TAVD---PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFID---GVECVDSFSFNPHKWLFT-TLDCCCLWVKDPSC  319 (502)
Q Consensus       247 G~id---pl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~---~~~~aDsi~~~~hK~l~~-p~~~g~~~~r~~~~  319 (502)
                      |.+-   .+++|+++|+++++|+++|.+|....+..+.......   .....-.++.++.|.++. +..+|++++.+...
T Consensus       178 G~v~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~R~g~~~~~~~~i  257 (394)
T d1c7na_         178 GRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNPDI  257 (394)
T ss_dssp             TBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHH
T ss_pred             ceeccHHHhhhhhccccccceeEeccccccccccCCccccchhhhhcccccceeecccccccccccccccccccccChhh
Confidence            9994   4777889999999999999999776543222111111   011223455678998874 46678888876644


Q ss_pred             hhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHH--HHHHhcHHHHHHHHHHHHHHHHHHHHHHhc-C
Q 037144          320 LLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWV--VIRNFGVANLRNFIRSHVGMAKLFERLVTS-D  396 (502)
Q Consensus       320 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~--~l~~~g~~g~~~~~~~~~~la~~l~~~l~~-~  396 (502)
                      . ..+.....+....                      ........+  .......+...+..+...+..+.+.+.++. .
T Consensus       258 ~-~~~~~~~~~~~~~----------------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  314 (394)
T d1c7na_         258 R-ERFTKSRDATSGM----------------------PFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVNH  314 (394)
T ss_dssp             H-HHHHHHHHHTTCC----------------------CCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             h-hhhhhhhhhcccc----------------------ccccccchhhhhhhcchhhhhcccccccchhhhhhhhhhhccc
Confidence            2 2221111111100                      001111111  122224566777777777777777777764 4


Q ss_pred             CCeEEecCCCeeEEEE-EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcEEEEeeeEC--CEE
Q 037144          397 KRFEVAFPRNFSLVCF-RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKVFMTHAIVG--GIY  472 (502)
Q Consensus       397 ~~~~l~~~~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~--g~~  472 (502)
                      +++++. +|+.++++| .++..+.                           ...++.++|.++ |.++.++..++  +.+
T Consensus       315 ~~~~~~-~p~g~~~~~~~~~~~~~---------------------------~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~~  366 (394)
T d1c7na_         315 PEIKAP-LIEGTYLQWIDFRALKM---------------------------DHKAMEEFMIHKAQIFFDEGYIFGDGGIG  366 (394)
T ss_dssp             TTSBCC-CCSBSSEEEEECGGGCC---------------------------CHHHHHHHHHHTTCCCCEEGGGGCGGGTT
T ss_pred             cceeec-CCCceeEEEEECCCCCC---------------------------CHHHHHHHHHHhCCEEEEcchhhCCCCCC
Confidence            566654 455555444 3322111                           023566666655 66555544442  356


Q ss_pred             EEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          473 VLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       473 ~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      ++|+|++   +++++|+++++.|+++.++
T Consensus       367 ~iRis~~---~~~e~i~eal~rl~~~l~~  392 (394)
T d1c7na_         367 FERINLA---APSSVIQESLERLNKALKD  392 (394)
T ss_dssp             EEEEECC---SCHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEe---CCHHHHHHHHHHHHHHHHh
Confidence            9999986   4677899999999988775

>d1v2da_ c.67.1.1 (A:) Glutamine aminotransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Glutamine aminotransferase
species: Thermus thermophilus [TaxId: 274]

Probab=99.82  E-value=1.8e-19  Score=179.27  Aligned_cols=318  Identities=10%  Similarity=0.002  Sum_probs=201.0

Q ss_pred             HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144           90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG  169 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~  169 (502)
                      |..+.+.+...+.. ...|....+..++++.    +++.++++.+       ..++|+|+++++..++.+...       
T Consensus        40 p~~i~~al~~~l~~-~~~Y~~~~G~~elr~a----iA~~~~~~~~-------~Iiit~G~~~al~~~~~~l~~-------  100 (368)
T d1v2da_          40 PPFLLEAVRRALGR-QDQYAPPAGLPALREA----LAEEFAVEPE-------SVVVTSGATEALYVLLQSLVG-------  100 (368)
T ss_dssp             CHHHHHHHHHHTTT-SCSCCCTTCCHHHHHH----HHHHHTSCGG-------GEEEESSHHHHHHHHHHHHCC-------
T ss_pred             CHHHHHHHHHHhhc-ccCCCCCcCCHHHHHH----HHhhcccCCc-------ceeeccchHHHHHHHhhcccc-------
Confidence            45555666665543 2356666666666655    4555678765       689999999999877765533       


Q ss_pred             ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCC-CCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144          170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTK-SSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA  248 (502)
Q Consensus       170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~-~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~  248 (502)
                          +++.|+++...|......++..|.   +++.++++. .+.+.+|++.|++++++.+      .+|+.+.++|+||.
T Consensus       101 ----~~d~v~~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~d~~~l~~~~~~~~------~~i~~~~p~NPtG~  167 (368)
T d1v2da_         101 ----PGDEVVVLEPFFDVYLPDAFLAGA---KARLVRLDLTPEGFRLDLSALEKALTPRT------RALLLNTPMNPTGL  167 (368)
T ss_dssp             ----TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECEEETTEEECCHHHHHTTCCTTE------EEEEEESSCTTTCC
T ss_pred             ----ccccccccCCcchhhhhHHHhcCC---ccceeccccccccccCCHHHHHHhhccCc------eEEEEcCCCCcccc
Confidence                567888888899999999999999   898888753 2357899999999986644      37788899999999


Q ss_pred             cCC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCC-CCcceEEEeeCchhhhhhh
Q 037144          249 VDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFT-TLDCCCLWVKDPSCLLSTL  324 (502)
Q Consensus       249 idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~-p~~~g~~~~r~~~~l~~~~  324 (502)
                      +-+   +++|+++|++||+++++|++|+......+....... ......+..+..|.++. ...+|++...+. ......
T Consensus       168 ~~~~~~l~~l~~~a~~~~i~ii~D~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~sk~~~~~G~R~g~~~~~~~-~~~~~~  245 (368)
T d1v2da_         168 VFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLREF-APERTFTVGSAGKRLEATGYRVGWIVGPKE-FMPRLA  245 (368)
T ss_dssp             CCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCHHHH-CTTTEEEEEEHHHHTTCGGGCCEEEECCTT-THHHHH
T ss_pred             cCCHHHHHHHHHHHHHcCCeeeechhhhhhcccccccccccc-cccccceeeccccccccccccccccccccc-ccchhh
Confidence            965   888999999999999999998765443322221111 11233445566665544 455777655433 222111


Q ss_pred             cCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q 037144          325 STNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG-VANLRNFIRSHVGMAKLFERLVTSDKRFEVAF  403 (502)
Q Consensus       325 ~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~  403 (502)
                      .....+...                     +.......+..++.... .+.++...+.+.++++++.+.|++. |+++..
T Consensus       246 ~~~~~~~~~---------------------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~  303 (368)
T d1v2da_         246 GMRQWTSFS---------------------APTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAM-GLRVYV  303 (368)
T ss_dssp             HHHHHHTSS---------------------CCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHT-TCCEEC
T ss_pred             hhhhccccc---------------------cccccccccccccccccchhhHHHHHHHHHHhhhhhhhhHHhc-CcEEec
Confidence            100000000                     00001111122222211 2356777777888999999999987 898874


Q ss_pred             CCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeE----CCEEEEEEEec
Q 037144          404 PRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIV----GGIYVLRFAAG  479 (502)
Q Consensus       404 ~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~----~g~~~lR~~~~  479 (502)
                      +.....+++.++...                             ..++   +.+.|.++.++..+    .+.+++|++++
T Consensus       304 p~g~~~~~~~l~~~~-----------------------------~~~l---l~~~gI~v~pg~~F~~~~~~~~~iRis~~  351 (368)
T d1v2da_         304 PEGTYFLMAELPGWD-----------------------------AFRL---VEEARVALIPASAFYLEDPPKDLFRFAFC  351 (368)
T ss_dssp             CSBSSEEEEECTTCC-----------------------------HHHH---HHHTCEECEEGGGGCSSSCCTTEEEEECC
T ss_pred             CCceeEEEEeCCccH-----------------------------HHHH---HHhCCEEEEechhhCCCCCCCCEEEEEec
Confidence            433344444443211                             1122   44567655443333    24579999986


Q ss_pred             CCCCcHHHHHHHHHHHHHH
Q 037144          480 NSMTMESHVRAAWTVVQEH  498 (502)
Q Consensus       480 ~~~t~~~di~~~~~~l~~~  498 (502)
                         +++++|+++++.|+++
T Consensus       352 ---~~~e~i~~ai~rL~~~  367 (368)
T d1v2da_         352 ---KTEEELHLALERLGRV  367 (368)
T ss_dssp             ---SCHHHHHHHHHHHHHH
T ss_pred             ---CCHHHHHHHHHHHHHh
Confidence               3677999999999876

>d1o4sa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermotoga maritima [TaxId: 2336]

Probab=99.82  E-value=3.5e-19  Score=177.58  Aligned_cols=326  Identities=10%  Similarity=0.033  Sum_probs=215.6

Q ss_pred             HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144           90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG  169 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~  169 (502)
                      |..+.+.+...++.....|....+..++.+.+.+|+.+..|.+.+.     ...++|+|+++++..++.+..+       
T Consensus        43 p~~i~~~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~-----~~i~~t~G~~~al~~~~~~l~~-------  110 (375)
T d1o4sa_          43 PEPVVEEAVRFLQKGEVKYTDPRGIYELREGIAKRIGERYKKDISP-----DQVVVTNGAKQALFNAFMALLD-------  110 (375)
T ss_dssp             CHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHHHHTCCCCG-----GGEEEESHHHHHHHHHHHHHCC-------
T ss_pred             CHHHHHHHHHHHhcCCcCCCCCcCCHHHHHHHHhhhhhcccccccc-----ccccccCcHHHHHHHHHHHHhC-------
Confidence            4556666666666655668777788999999999999998876432     2689999999988776665543       


Q ss_pred             ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144          170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV  249 (502)
Q Consensus       170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i  249 (502)
                          +++.|++..+.++.+...+...|.   .++.++.+.++.+.+|.+.++....+.      +.+++++.++|+||.+
T Consensus       111 ----~gd~vlv~~P~y~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~l~nP~NPTG~~  177 (375)
T d1o4sa_         111 ----PGDEVIVFSPVWVSYIPQIILAGG---TVNVVETFMSKNFQPSLEEVEGLLVGK------TKAVLINSPNNPTGVV  177 (375)
T ss_dssp             ----TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECCGGGTTCCCHHHHHHTCCTT------EEEEEEESSCTTTCCC
T ss_pred             ----CCCEEEEccCccccchhhhhcccc---ccccccccccccccchhHHHHHhhccC------ccEEEEeCCCCCccCC
Confidence                567788888899888888899998   899998887667888988887755443      3478889999999998


Q ss_pred             ---CChhHHHHHHHHhCCEEEeecccccccccCccchhh-hcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhhh
Q 037144          250 ---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF-IDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTL  324 (502)
Q Consensus       250 ---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~-~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~  324 (502)
                         +.+++|+++|++|++||+.|.+|+......+..... ..+...--.+..++.|.++ ....+|+++..+. ......
T Consensus       178 ~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~G~R~G~~~~~~~-~~~~~~  256 (375)
T d1o4sa_         178 YRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISSEK-VATAVS  256 (375)
T ss_dssp             CCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTTTCGGGCCEEEECCHH-HHHHHH
T ss_pred             CCHHHHHHHHHhHHHcCCceehHhhhccccccccccccccccCCCCCEEEEeechhhccCCcccccccccccc-chhhhh
Confidence               457788888999999999999886554432211111 1111122255677999987 4577788765433 222111


Q ss_pred             cCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC
Q 037144          325 STNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP  404 (502)
Q Consensus       325 ~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~  404 (502)
                      ........                        .............+ ........+...+.++.+.+.|++. |+++. +
T Consensus       257 ~~~~~~~~------------------------~~~~~~~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~l~~~-g~~~~-~  309 (375)
T d1o4sa_         257 KIQSHTTS------------------------CINTVAQYAALKAL-EVDNSYMVQTFKERKNFVVERLKKM-GVKFV-E  309 (375)
T ss_dssp             HHHHHHTC------------------------SCCHHHHHHHHHHT-TCCCHHHHHHHHHHHHHHHHHHHHT-TCCCC-C
T ss_pred             hhhccccc------------------------cccccchhhhhhhc-ccchhhhHHHHHHHHHHHHHHHHhc-CceEe-c
Confidence            11100000                        00112222222222 2333445566777788888888887 78875 5


Q ss_pred             CCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeECCEEEEEEEecCCCC
Q 037144          405 RNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVGGIYVLRFAAGNSMT  483 (502)
Q Consensus       405 ~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lR~~~~~~~t  483 (502)
                      |+.+++.|.-.+..                             ..++.+++. +.|.++.++..+...+++|++++   +
T Consensus       310 p~gg~f~~~~~~~~-----------------------------~~~~~~~ll~~~gV~v~pG~~F~~~g~iRis~~---~  357 (375)
T d1o4sa_         310 PEGAFYLFFKVRGD-----------------------------DVKFCERLLEEKKVALVPGSAFLKPGFVRLSFA---T  357 (375)
T ss_dssp             CSBSSEEEEECSSC-----------------------------HHHHHHHHHHHHCEECEEGGGGTCTTEEEEECC---S
T ss_pred             CCccEEEEEECCCC-----------------------------HHHHHHHHHHhCCEEEEEccccCCCCeEEEEEc---C
Confidence            55555444332221                             123334433 45876666666666779999986   4


Q ss_pred             cHHHHHHHHHHHHHHHH
Q 037144          484 MESHVRAAWTVVQEHLE  500 (502)
Q Consensus       484 ~~~di~~~~~~l~~~~~  500 (502)
                      ++++++++++.|+++.+
T Consensus       358 ~~e~l~~al~rl~~~l~  374 (375)
T d1o4sa_         358 SIERLTEALDRIEDFLN  374 (375)
T ss_dssp             CHHHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHHHhc
Confidence            67899999999998765

>d1vp4a_ c.67.1.1 (A:) Putative aminotransferase TM1131 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative aminotransferase TM1131
species: Thermotoga maritima [TaxId: 2336]

Probab=99.82  E-value=4e-19  Score=179.99  Aligned_cols=335  Identities=9%  Similarity=0.025  Sum_probs=210.2

Q ss_pred             HHHHHHHHHhhcCCC---CcccccChhhHHHHHHHHHHHHHhcCCCC-ccCcCCCCcEEEcCCchHHHHHHHHHHHHHHH
Q 037144           90 AGIVGEMLSSGFNVV---GLDWISSPAAVELENIVMDWLGQMLDLPK-SFLFSGNGGGVIQGTTCEALLCTLTAARDRVL  165 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~---~~~~~~~p~~~~le~~~~~~l~~l~g~~~-~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~  165 (502)
                      ...+.+.+...+...   ...|....+..++.+.+++|+.+.+|.+. +.     ...++|+|+++++..++.+..+   
T Consensus        55 ~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~-----~~I~it~G~~~al~~~~~~~~~---  126 (420)
T d1vp4a_          55 RKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLLERMYGITGLDE-----DNLIFTVGSQQALDLIGKLFLD---  126 (420)
T ss_dssp             HHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHHHHHHHHHCCCSCCG-----GGEEEEEHHHHHHHHHHHHHCC---
T ss_pred             HHHHHHHHHHHHhhCCccccCCCCCcCCHHHHHHHHHHHHHHhCCCCCCH-----HHeEeccchhhhHHHHHHhhhc---
Confidence            445555555544332   23577777789999999999999998752 11     2689999999998777665443   


Q ss_pred             HHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCC---ccEEEEEecC
Q 037144          166 KKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAEL---IPLFLCATVG  242 (502)
Q Consensus       166 ~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~---~p~~Vv~t~g  242 (502)
                              +++.|+++...+..+...++..|.   +++.+|.++   ..+|++.++..+.+......   ...+++.+.+
T Consensus       127 --------~Gd~Vlv~~P~y~~~~~~~~~~g~---~~~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~p  192 (420)
T d1vp4a_         127 --------DESYCVLDDPAYLGAINAFRQYLA---NFVVVPLED---DGMDLNVLERKLSEFDKNGKIKQVKFIYVVSNF  192 (420)
T ss_dssp             --------TTCEEEEEESCCHHHHHHHHTTTC---EEEEEEEET---TEECHHHHHHHHHHHHHTTCGGGEEEEEEECSS
T ss_pred             --------cccccccccccccchhHHHHHHhh---hcccccccc---cccccchhhhhhhhhHHHhhccccceeeEecCC
Confidence                    678888999999999999999999   999999874   36899999998876544332   2345566778


Q ss_pred             Ccccccc---CChhHHHHHHHHhCCEEEeecccccccccCccchhhh-cCCCCCCeeEEccCCcCCCCCcceEEEeeCch
Q 037144          243 TTAITAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFI-DGVECVDSFSFNPHKWLFTTLDCCCLWVKDPS  318 (502)
Q Consensus       243 tt~~G~i---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~-~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~  318 (502)
                      +|+||.+   +.+++|+++|++|++++++|.+|....+..+...... ..-...-.+..++.|+++....+|+++. ++.
T Consensus       193 ~NPtG~~~s~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~i~~~s~sk~~~~G~RiG~~~~-~~~  271 (420)
T d1vp4a_         193 HNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSKVLAPGLRIGMVAG-SKE  271 (420)
T ss_dssp             CTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTEEEEEESTTTTCGGGCEEEEEC-CHH
T ss_pred             CCccchhhhhhhhhhhhhhhhcccccccccchhhhccccCcccccccccccccceeEEeccccccccccccccccc-cch
Confidence            9999998   4578999999999999999999976654332211111 0111233455668898887778888765 444


Q ss_pred             hhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh----cHHHHHHHHHHHHHHHHH----HH
Q 037144          319 CLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF----GVANLRNFIRSHVGMAKL----FE  390 (502)
Q Consensus       319 ~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~----g~~g~~~~~~~~~~la~~----l~  390 (502)
                      .+.........+...                        ...+..+.+...+    -.+.+++..+.+.+..+.    |.
T Consensus       272 ~i~~l~~~~~~~~~~------------------------~~~~~q~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~  327 (420)
T d1vp4a_         272 FIRKIVQAKQSADLC------------------------SPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALE  327 (420)
T ss_dssp             HHHHHHHHHHHHHSS------------------------CCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhhhhhhhhcccc------------------------CchhhhhhhhhhcccccccccchhHHHHhhhhcccchhhhh
Confidence            333221111110000                        0111111111111    122334444444444444    44


Q ss_pred             HHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC-
Q 037144          391 RLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG-  469 (502)
Q Consensus       391 ~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-  469 (502)
                      +.+.+.||+++. +|..++++|.-.+.+.+                           ..++.+.+.+.|.++.++..+. 
T Consensus       328 ~~~~~~~g~~~~-~p~gg~f~~~~~~~~~d---------------------------~~~~~~~l~~~gV~v~PG~~F~~  379 (420)
T d1vp4a_         328 EYFSDIPGVKWV-KSEGGLFIWLTLPEGFD---------------------------TWEMFEYAKRKKVFYVPGRVFKV  379 (420)
T ss_dssp             HHSTTSTTCEEC-CCSBSSEEEEECCTTCC---------------------------TTTTHHHHHHHTEECEEGGGGCT
T ss_pred             hhhccCCCcEEe-cCCceEEEEEECCCCCC---------------------------HHHHHHHHHHCCeEEEechhhCC
Confidence            444567889886 55555554433332210                           1134455666687665554432 


Q ss_pred             ---CEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          470 ---GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       470 ---g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                         +..++|+|++.  .++++++++++.|++++++
T Consensus       380 ~~~~~~~iRls~~~--~~~e~l~~a~~rL~~~l~~  412 (420)
T d1vp4a_         380 YDEPSPSMRLSFCL--PPDEKIVEGIKRLREVVLE  412 (420)
T ss_dssp             TCCCCSEEEEECSS--SCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEEeCc--CCHHHHHHHHHHHHHHHHH
Confidence               35699999864  3567899999888887765

>d1wyub1 c.67.1.7 (B:2-472) Glycine dehydrogenase subunit 2 (P-protein) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Glycine dehydrogenase subunits (GDC-P)
domain: Glycine dehydrogenase subunit 2 (P-protein)
species: Thermus thermophilus [TaxId: 274]

Probab=99.80  E-value=2.1e-17  Score=167.18  Aligned_cols=393  Identities=13%  Similarity=0.079  Sum_probs=234.7

Q ss_pred             chhHhhcCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCcccccCC--CCCCHHHHHHHHHHhhcCCCCc-ccccChhh
Q 037144           38 PGYLKKRLPESAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYFP--ATSSVAGIVGEMLSSGFNVVGL-DWISSPAA  114 (502)
Q Consensus        38 ~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~--~~~~~~~~~~~~l~~~~n~~~~-~~~~~p~~  114 (502)
                      |++++..-+..||+  .|..|+++++.++..+|.....+..++|...  -.|.....+..+++ .+.+++. ..+++...
T Consensus        30 P~~~~~~~~l~LP~--~sE~El~r~~~~la~kN~~~~~~~~~lG~~~~hy~P~v~~~~~~~~T-aYTPYQPaEiSQG~LQ  106 (471)
T d1wyub1          30 PKEHLREVPPRLPE--VDELTLVRHYTGLSRRQVGVDTTFYPLGSCTMKYNPKLHEEAARLFA-DLHPYQDPRTAQGALR  106 (471)
T ss_dssp             CGGGBCSSCCCCCC--CCHHHHHHHHHHHHTTCCCTTTSCCCBTTTCCCCCCHHHHHHHHTTS-SCCTTSCGGGCHHHHH
T ss_pred             CHHHHcCCCCCCCC--CCHHHHHHHHHHHHhCCCCccccccCCccccCccCcchhhhHHHHHh-ccCCCCCHHHHHHHHH
Confidence            45555455567884  8999999999999887764444555666211  11223333333322 2334442 33344444


Q ss_pred             HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH
Q 037144          115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI  194 (502)
Q Consensus       115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~  194 (502)
                      .-+|  ...++++|.|++-..       ...- .|..|...|+.+++....++ +. .....+++++...|.........
T Consensus       107 alfE--fQtmi~eLTGMdvaN-------aS~y-DGatA~aeA~~ma~r~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~  174 (471)
T d1wyub1         107 LMWE--LGEYLKALTGMDAIT-------LEPA-AGAHGELTGILIIRAYHEDR-GE-GRTRRVVLVPDSAHGSNPATASM  174 (471)
T ss_dssp             HHHH--HHHHHHHHHTCSEEE-------CCCS-SHHHHHHHHHHHHHHHHHHT-TC-TTTCCEEEEETTSCTHHHHHHHH
T ss_pred             HHHH--HHHHHHHHhCCCccc-------cccc-hHHHHHHHHHHHHHHHhhhc-cc-ccccccccCCcccccceeeeeec
Confidence            4455  458999999997531       1122 23445556666665432221 11 11234555666666666677777


Q ss_pred             cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccccc
Q 037144          195 VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAG  274 (502)
Q Consensus       195 ~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~  274 (502)
                      .+.   .++.++.+.  .+..|.+.++.++.++.      ..++++.+++..+..+.++++++++++.|..+++|++...
T Consensus       175 ~~~---~~~~~~~~~--~~~~~~~~~~~~~~~~~------a~v~v~~p~~~g~~e~~~~~~~~~~h~~g~~~~~~~~~~~  243 (471)
T d1wyub1         175 AGY---QVREIPSGP--EGEVDLEALKRELGPHV------AALMLTNPNTLGLFERRILEISRLCKEAGVQLYYDGANLN  243 (471)
T ss_dssp             TTC---EEEEECBCT--TSSBCHHHHHHHCSTTE------EEEEECSSCTTSCCCTTHHHHHHHHHHHTCEEEEEGGGGG
T ss_pred             ccc---eeecccccc--cccccchhhhhhhhccc------cceeeccCCCcccccchhhhhHHHHHhccccccccccchh
Confidence            777   888888764  45889999888766554      3677777776666667799999999999999999987544


Q ss_pred             ccccCccchhhhcCCCCCCeeEEccCCcCCCC-----CcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCc
Q 037144          275 SACICPEFRHFIDGVECVDSFSFNPHKWLFTT-----LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKD  349 (502)
Q Consensus       275 ~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-----~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~  349 (502)
                      ..+........     ++|.++++.|+.|+.|     .++|++.++++.  .+.   .|..+......   .......+.
T Consensus       244 ~~~~l~~p~~~-----g~div~vg~~q~~G~P~~~GGP~~G~~a~~~~~--~R~---~PGRiV~~~~~---~~~~~~~RE  310 (471)
T d1wyub1         244 AIMGWARPGDM-----GFDVVHLNLHKTFTVPHGGGGPGSGPVGVKAHL--APY---LPVPLVERGEE---GFYLDFDRP  310 (471)
T ss_dssp             GTTTTCCHHHH-----TCSEEECCTTTTTCCCCTTSCCCCCCEEECGGG--GGG---CCSCEEEECSS---CEEEECCCT
T ss_pred             hhhhccccCcc-----cccccccccccccccccccccccccceeehhhh--hcc---CCCceecCCCc---cccccCCCc
Confidence            43322222222     7899999999988776     446667776542  122   22222211110   000000011


Q ss_pred             cccc----CCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-CCeeEEEEEeecCcchhhh
Q 037144          350 WQIT----LCRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP-RNFSLVCFRVTPSAVMDKL  423 (502)
Q Consensus       350 ~~~~----~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~-~~~~~v~f~~~~~~~~~~~  423 (502)
                      ..+.    |+.. ..++..+..+..+|.+|++++.+.+..+|+|++++|+. +|+++..+ +.++-+++..+. +.    
T Consensus       311 qhIrRe~actnqaL~al~A~vYlsllG~~GL~elA~~~~~~A~Yla~~L~~-~G~~~~~~~~ff~EFvv~~~~-~~----  384 (471)
T d1wyub1         311 KSIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKE-KGYRVPYDGPSMHEFVAQPPE-GF----  384 (471)
T ss_dssp             TCCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCBCSSCSSCCSCEEEBCST-TC----
T ss_pred             ccccchhhhhhhHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHhh-cCceeccCcceeeEEeecCCC-CC----
Confidence            1110    1111 12245556677789999999999999999999999976 69998643 334444443321 11    


Q ss_pred             hhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeee-E--CCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144          424 RTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAI-V--GGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~--~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~  500 (502)
                                      +       ...+.++|.+.|..  .++. +  .+...+-+|++.. ++++|||+++++|+++.+
T Consensus       385 ----------------~-------~~~i~k~L~~~G~~--~~~~~~p~~~~~~llv~vTE~-~tkedID~lv~aL~~i~~  438 (471)
T d1wyub1         385 ----------------R-------ALDLAKGLLELGFH--PPTVYFPLIVKEALMVEPTET-EAKETLEAFAEAMGALLK  438 (471)
T ss_dssp             ----------------C-------HHHHHHHHHHTTCC--CCEESCSTTSTTCEEECCCTT-SCHHHHHHHHHHHHHHHT
T ss_pred             ----------------C-------HHHHHHHHHHcCCC--CCcccCcCCCCCeEEEecCCC-CCHHHHHHHHHHHHHHHH
Confidence                            0       12355556666863  2222 1  1345688898855 556699999999999887


Q ss_pred             h
Q 037144          501 A  501 (502)
Q Consensus       501 ~  501 (502)
                      +
T Consensus       439 e  439 (471)
T d1wyub1         439 K  439 (471)
T ss_dssp             S
T ss_pred             h
Confidence            4

>d1lc5a_ c.67.1.1 (A:) L-threonine-O-3-phosphate decarboxylase CobD {Salmonella enterica [TaxId: 28901]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: L-threonine-O-3-phosphate decarboxylase CobD
species: Salmonella enterica [TaxId: 28901]

Probab=99.80  E-value=6.3e-18  Score=167.08  Aligned_cols=285  Identities=12%  Similarity=0.072  Sum_probs=183.2

Q ss_pred             HHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCC
Q 037144          121 VMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRK  200 (502)
Q Consensus       121 ~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~  200 (502)
                      +++++++.+|.+..       ..++++|+++++...+. +..           ++.+++. .+.+..+.......+.   
T Consensus        62 Lr~aia~~~~v~~~-------~I~~~~g~~~~~~~~~~-~~~-----------~~~~~v~-~p~~~~~~~~~~~~~~---  118 (355)
T d1lc5a_          62 LHQALARHHQVPAS-------WILAGNGETESIFTVAS-GLK-----------PRRAMIV-TPGFAEYGRALAQSGC---  118 (355)
T ss_dssp             HHHHHHHHHTSCGG-------GEEEESSHHHHHHHHHH-HHC-----------CSEEEEE-ESCCTHHHHHHHHTTC---
T ss_pred             HHHHHHHHhCCCHH-------HEEecccHHHHHHHHHh-hhc-----------ccccccc-CCccceeccccccccc---
Confidence            45567777898875       57888877776654333 211           2333333 3456566777788888   


Q ss_pred             CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hhHHHHHHHHhCCEEEeecccccccc
Q 037144          201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSAC  277 (502)
Q Consensus       201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~  277 (502)
                      .++.+|++.++++.++ +++++++..+      +.+|+++.++|+||.+-+   +.+|+++|++|++++++|.+|..+..
T Consensus       119 ~~~~v~~~~~~~~~~~-~~~~~~~~~~------~~~v~l~nP~NPtG~~~~~e~l~~i~~~a~~~~~~li~De~y~~~~~  191 (355)
T d1lc5a_         119 EIRRWSLREADGWQLT-DAILEALTPD------LDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIP  191 (355)
T ss_dssp             EEEEEECCGGGTTCCC-TTHHHHCCTT------CCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGST
T ss_pred             cceeeeeeccCCccce-eeeeeccccc------cceeeeecccCcccccchhhhhhhhhhhccccccccccccceeeeee
Confidence            8999999765445555 4454444333      337888899999999865   77888889999999999999976543


Q ss_pred             cCccchhhhcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhhhcC-CcccccCccCCCCCcccccCCCcccccCC
Q 037144          278 ICPEFRHFIDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLST-NPQYLKNEATDQEPKEQEVGYKDWQITLC  355 (502)
Q Consensus       278 ~~~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~~~~s  355 (502)
                      ..+....... ...-..+..+++|+++ ....+|+++..+... ...+.. ...+                         
T Consensus       192 ~~~~~~~~~~-~~~~~i~~~S~SK~~~l~GlR~G~~i~~~~~~-~~~~~~~~~~~-------------------------  244 (355)
T d1lc5a_         192 HETGFIPALK-DNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAA-MARMRRQQMPW-------------------------  244 (355)
T ss_dssp             TCCCSGGGCT-TCTTEEEEEESTTTTTCTTTCCEEEECCCHHH-HHHHHHHSCTT-------------------------
T ss_pred             eccccccccc-ccccceeecccccccccccccccceeccchhh-hHHHHhhcCCc-------------------------
Confidence            2222111111 1122366778999987 446678877655432 222211 1000                         


Q ss_pred             CCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCccc
Q 037144          356 RRFRSLKLWVVIRNF-GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQ  434 (502)
Q Consensus       356 r~~~al~~~~~l~~~-g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~  434 (502)
                       ....+...++...+ ..+.+.+.+++..+..+++.+.|.+++++++. +...+.+++.....                 
T Consensus       245 -~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-p~~~~f~~~~~~~~-----------------  305 (355)
T d1lc5a_         245 -SVNALAALAGEVALQDSAWQQATWHWLREEGARFYQALCQLPLLTVY-PGRANYLLLRCERE-----------------  305 (355)
T ss_dssp             -CSCHHHHHHHHHGGGCHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEC-CCSSSEEEEEESCT-----------------
T ss_pred             -cccccccccccccccccchhHHHHHHHHHHHHHHHHHHhhcCCcEEC-CCCCEEEEEECCCC-----------------
Confidence             01234444444443 35667788888889999999999999999865 55556666555321                 


Q ss_pred             ccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC--CEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144          435 YRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG--GIYVLRFAAGNSMTMESHVRAAWTVVQEH  498 (502)
Q Consensus       435 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lR~~~~~~~t~~~di~~~~~~l~~~  498 (502)
                                   ..++.++|.++|.++.++..+.  +..++|+++.    +++++++++++|+++
T Consensus       306 -------------~~~~~~~L~~~gv~vr~~~~f~~~~~~~iRis~~----~~~e~~~li~aL~~i  354 (355)
T d1lc5a_         306 -------------DIDLQRRLLTQRILIRSCANYPGLDSRYYRVAIR----SAAQNERLLAALRNV  354 (355)
T ss_dssp             -------------TCCHHHHHHTTTEECEECTTSTTCCTTEEEEECC----CHHHHHHHHHHHHHH
T ss_pred             -------------HHHHHHHHHHCCcEEEeCccCCCCCCCEEEEEeC----CHHHHHHHHHHHHHh
Confidence                         1246677888887655555454  3569999975    567999999999886

>d1wsta1 c.67.1.1 (A:13-415) Multiple substrate aminotransferase, MSAT {Thermococcus profundus [TaxId: 49899]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Multiple substrate aminotransferase, MSAT
species: Thermococcus profundus [TaxId: 49899]

Probab=99.80  E-value=8.2e-19  Score=176.61  Aligned_cols=337  Identities=9%  Similarity=0.012  Sum_probs=211.3

Q ss_pred             HHHHHHHHHhhcCCC---CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHH
Q 037144           90 AGIVGEMLSSGFNVV---GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLK  166 (502)
Q Consensus        90 ~~~~~~~l~~~~n~~---~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~  166 (502)
                      ...+.+.+...+...   ...|....+..++.+.+.+|+.+.+|.+-+.     ...++|+|+++++..++.+..+    
T Consensus        46 ~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aia~~l~~~~g~~~~~-----~~I~it~G~~~al~~~~~~l~~----  116 (403)
T d1wsta1          46 VETIKKIAVEVLEEHADKALQYGTTKGFTPLRLALARWMEKRYDIPMSK-----VEIMTVAGSQQALDLIGRVFLN----  116 (403)
T ss_dssp             HHHHHHHHHHHHHHSHHHHHSCCCSSCCHHHHHHHHHHHHHHHCCCCTT-----CEEEEESSHHHHHHHHHHHHCC----
T ss_pred             HHHHHHHHHHHHHhCcccccCCCCCcCCHHHHHHHHHHHHHHhCCCCCh-----HHeeecccchHHHHHHHHHHhh----
Confidence            344555555544222   2347777778899999999999999875321     2689999999999877665433    


Q ss_pred             HhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcC-CccEEEEEecCCcc
Q 037144          167 KIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAE-LIPLFLCATVGTTA  245 (502)
Q Consensus       167 ~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g-~~p~~Vv~t~gtt~  245 (502)
                             +++.|++.+++|..+...+..+|.   +++.||.+..   ..+...+........++. ..+.+++.+.++|+
T Consensus       117 -------~gd~v~~~~P~y~~~~~~~~~~g~---~~~~v~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~NP  183 (403)
T d1wsta1         117 -------PGDPIVVEAPTYLAAIQAFKYYDP---EFISIPLDDK---GMRVDLLEEKLEELRKQGKRVKIVYTVSTFQNP  183 (403)
T ss_dssp             -------TTCEEEEEESCCHHHHHHHHTTCC---EEEEEEEETT---EECHHHHHHHHHHHHHTTCCCCEEEECCSSCTT
T ss_pred             -------cCCccccCCCcchhhhHHHhhccc---cceeEeeccc---CCccccccccchhhhhccccccccccccccCCC
Confidence                   677888889999999999999999   9999998753   345555555554443333 34567777889999


Q ss_pred             ccccC---ChhHHHHHHHHhCCEEEeecccccccccCccchhhhc-CCCCCCeeEEccCCcCCCCCcceEEEeeCchhhh
Q 037144          246 ITAVD---PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFID-GVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLL  321 (502)
Q Consensus       246 ~G~id---pl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~-~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~  321 (502)
                      ||.+-   .+++|+++|++||+++++|.+|+...+.......... .-..-..++.+++|+++....+|+++.. +..+.
T Consensus       184 tG~~~s~~~l~~i~~~a~~~~~~li~De~y~~l~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G~RiG~~i~~-~~~i~  262 (403)
T d1wsta1         184 AGVTMSVDRRKKLLELANEYDFLIVEDGPYSELRYSGEPTPPIKHFDDYGRVIYLGTFSKILAPGFRIGWVAAH-PHLIR  262 (403)
T ss_dssp             TCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGGCSSSCEEEEEESTTTTCGGGCCEEEEEC-HHHHH
T ss_pred             CCccCCHHHHHHHHHHHHhcCceeccccchhheecCCCCCCcccccCCCCcEEEEccccceecCcccccccccc-hHHHH
Confidence            99884   4678888999999999999999765543322211110 0012335667899999866788888763 33322


Q ss_pred             hhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcC--C
Q 037144          322 STLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSD--K  397 (502)
Q Consensus       322 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~--~  397 (502)
                      ...... .+....                    . ......+..++...  ....+.+..+.....++.+.+.|.+.  .
T Consensus       263 ~~~~~~-~~~~~~--------------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~  320 (403)
T d1wsta1         263 KMEIAK-QSIDLC--------------------T-NTFGQAIAWKYVENGYLDEHIPKIIEFYKPRRDAMLEALEEYMPE  320 (403)
T ss_dssp             HHHHHH-HHHHSS--------------------C-CHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCT
T ss_pred             HHHHHH-hhhccc--------------------c-ccchhhhHHhhhhccccchhHHHHHHHHHHHHHHHHHHHHhhccC
Confidence            211110 000000                    0 00011111111111  23445667777777888888888663  3


Q ss_pred             CeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeE----CCEEE
Q 037144          398 RFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIV----GGIYV  473 (502)
Q Consensus       398 ~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~----~g~~~  473 (502)
                      ++... .|..++++|...+.+.+                           ...+.+.+.++|.+++++..+    .+..+
T Consensus       321 ~~~~~-~p~gg~~~~~~~~~~~~---------------------------~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~  372 (403)
T d1wsta1         321 GVEWT-KPEGGMFVRVTLPEGID---------------------------TKLMMERAVAKGVAYVPGEAFFVHRDKKNT  372 (403)
T ss_dssp             TCEEC-CCSBSSEEEEECCTTCC---------------------------TTTTHHHHHHTTEECEEGGGGSTTCCCCSE
T ss_pred             CeEEe-CCCceeEEEEECCCCCC---------------------------HHHHHHHHHHCCEEEEechhhcCCCCCCCE
Confidence            56654 45555555443333210                           124566677778765554333    24579


Q ss_pred             EEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          474 LRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       474 lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      +|++++.  .++++++++++.|++++++
T Consensus       373 iRi~~~~--~~~~~l~~al~rl~~~l~~  398 (403)
T d1wsta1         373 MRLNFTY--VPEETIREGVRRLAETIKE  398 (403)
T ss_dssp             EEEECSS--SCHHHHHHHHHHHHHHHHH
T ss_pred             EEEEecC--CCHHHHHHHHHHHHHHHHH
Confidence            9999864  4677899888888877654

>d1mdoa_ c.67.1.4 (A:) Aminotransferase ArnB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Aminotransferase ArnB
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.80  E-value=2.5e-19  Score=178.57  Aligned_cols=261  Identities=14%  Similarity=0.090  Sum_probs=171.0

Q ss_pred             HHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCC
Q 037144           96 MLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISK  175 (502)
Q Consensus        96 ~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~  175 (502)
                      .+...+...  .+..+|...++|+.    +++++|.+.         ++++++||.|+..++.+..-.          ++
T Consensus        17 ~~~~~~~~~--~~~~G~~v~~~E~~----la~~~g~~~---------ai~~~sgt~Al~~al~al~~~----------~g   71 (376)
T d1mdoa_          17 AVKTVLDSG--WITTGPKNQELEAA----FCRLTGNQY---------AVAVSSATAGMHIALMALGIG----------EG   71 (376)
T ss_dssp             HHHHHHHHT--CCSSSHHHHHHHHH----HHHHHCCSE---------EEEESCHHHHHHHHHHHTTCC----------TT
T ss_pred             HHHHHHhcC--CCcCCHHHHHHHHH----HHHHHCcCe---------EEEeCCHHHHHHHHHHHhCCC----------CC
Confidence            344444332  34457877777755    788888753         688899999999888764211          67


Q ss_pred             eEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHH
Q 037144          176 LVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPL  255 (502)
Q Consensus       176 ~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI  255 (502)
                      ++|+++..+|.+...++...|.   .++.++++++ ++.||+++|+++|++.++      +|+++   ...|...|+++|
T Consensus        72 deVi~~~~~~~~~~~ai~~~g~---~pv~~d~~~~-~~~~d~~~l~~~i~~~tk------aIi~~---h~~G~~~~~~~i  138 (376)
T d1mdoa_          72 DEVITPSMTWVSTLNMIVLLGA---NPVMVDVDRD-TLMVTPEHIEAAITPQTK------AIIPV---HYAGAPADLDAI  138 (376)
T ss_dssp             CEEEEESSSCHHHHHHHHHTTC---EEEEECBCTT-TCCBCHHHHHHHCCTTEE------EECCB---CGGGCCCCHHHH
T ss_pred             CEEEEecccccccccchhcccc---ceeeeccccc-ccCCCHHHHHHhcCCCCe------EEEEe---CCCCCccchhHH
Confidence            8999999999999999999999   9999999874 589999999999976553      56655   468999999999


Q ss_pred             HHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCcc
Q 037144          256 CDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEA  335 (502)
Q Consensus       256 ~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~  335 (502)
                      .++|+++|++++.|+|++.+...-..    ..|..+...+++.++|++.++ +.|++++.+...................
T Consensus       139 ~~i~~~~~i~vIeD~a~a~g~~~~~~----~~g~~g~~~~Sf~~~K~l~~g-~GG~i~t~~~~l~~~~~~~~~~g~~~~~  213 (376)
T d1mdoa_         139 YALGERYGIPVIEDAAHATGTSYKGR----HIGARGTAIFSFHAIKNITCA-EGGIVVTDNPQFADKLRSLKFHGLGVDA  213 (376)
T ss_dssp             HHHHHHHTCCBCEECTTCTTCEETTE----ETTSSSEEEEECCTTSSSCSS-SCEEEEESCHHHHHHHHHHTBTTEECC-
T ss_pred             HHHHHhcCceEEeccchhccCeeCCe----ecccccCccccCCCcCCCCCC-CCCEEEEechhHHHHHHhhcccCCcccc
Confidence            99999999999999999776543221    112224456778889999764 4577777766543222111100000000


Q ss_pred             CCCCCcccccCCCccc-ccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144          336 TDQEPKEQEVGYKDWQ-ITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA  402 (502)
Q Consensus       336 ~~~~~~~~~~~~~~~~-~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~  402 (502)
                      ..   .........+. ...+..++...+-+++-......+.+.+++..++++++.+.|++++...+.
T Consensus       214 ~~---~~~~~~~~~~~~~~~g~n~~~~~~~Aai~~~qL~~~~~~~~~r~~~~~~~~~~L~~~~~~~~~  278 (376)
T d1mdoa_         214 WD---RQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQLQKLDALNARRAAIAAQYHQAMADLPFQPLS  278 (376)
T ss_dssp             -------------CCEESSCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTSSCEECC
T ss_pred             cc---cccccccccccchhcccccccchhhhhhhhhhhhhhhHHHHHHhhhhhhhhhhcccccccccc
Confidence            00   00000000000 111112222233333433345667888999999999999999998766554

>d2gb3a1 c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: AAT homologue TM1698
species: Thermotoga maritima [TaxId: 2336]

Probab=99.79  E-value=1.1e-18  Score=174.86  Aligned_cols=332  Identities=11%  Similarity=0.050  Sum_probs=212.7

Q ss_pred             HHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHh
Q 037144           89 VAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKI  168 (502)
Q Consensus        89 ~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~  168 (502)
                      +|..+.+.+.+.. .....|....+..++.+.+++|+.+.+|.+-+.     ...++|+|+++++..++.+..+      
T Consensus        42 ~p~~~~~al~~~~-~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~-----~~I~it~G~~~~l~~~~~~l~~------  109 (389)
T d2gb3a1          42 TPEVFFERIYENK-PEVVYYSHSAGIWELREAFASYYKRRQRVDVKP-----ENVLVTNGGSEAILFSFAVIAN------  109 (389)
T ss_dssp             CCTHHHHHHHHTC-CSSCCCCCTTCCHHHHHHHHHHHHHTSCCCCCG-----GGEEEESHHHHHHHHHHHHHCC------
T ss_pred             CCHHHHHHHHhcC-CCCCCCCCCcCCHHHHHHHHHHHHHhcCCCccc-----ceEEeccccccccccccccccc------
Confidence            3555666666544 345568777778999999999999998875321     2689999999988776665543      


Q ss_pred             CccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144          169 GRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA  248 (502)
Q Consensus       169 ~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~  248 (502)
                           +++.|++..+.++.+...+...|.   .++.++.+.+ .+..+.+.+.+.+.+.      +.+++++.++|+||.
T Consensus       110 -----~gd~V~i~~P~y~~~~~~~~~~g~---~~~~~~~~~~-~~~~~~~~~~~~~~~~------~~~~~l~nP~NPtG~  174 (389)
T d2gb3a1         110 -----PGDEILVLEPFYANYNAFAKIAGV---KLIPVTRRME-EGFAIPQNLESFINER------TKGIVLSNPCNPTGV  174 (389)
T ss_dssp             -----TTCEEEEEESCCTHHHHHHHHHTC---EEEEEECCGG-GTSCCCTTGGGGCCTT------EEEEEEESSCTTTCC
T ss_pred             -----CCCeEEEeCCCCccccccccccCc---cccccccccc-cccchhhhhhhhcccC------ccEEEeCCCCccccc
Confidence                 567888888899999999999999   9999998754 3344544444443332      447788889999999


Q ss_pred             c---CChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhh
Q 037144          249 V---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTL  324 (502)
Q Consensus       249 i---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~  324 (502)
                      +   +.+++|.++|++|+++++.|.+|+......... ........-..+..+..|.++.| ..+|+++..++.......
T Consensus       175 ~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~-~~~~~~~~~~~v~~s~sK~~~~~GlRiG~~~~~~~~i~~~~~  253 (389)
T d2gb3a1         175 VYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFA-SALSIESDKVVVIDSVSKKFSACGARVGCLITRNEELISHAM  253 (389)
T ss_dssp             CCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCC-CGGGSCCTTEEEEEESTTTTTCGGGCCEEEECSCHHHHHHHH
T ss_pred             cchHHHHHHHHhhcccCCEEEEEeccccccccccccc-cccccccccccccccccccccCcccceeeeeccchhHHHHHh
Confidence            8   458899999999999999999997665433211 11222223335566777887765 668888776654322111


Q ss_pred             cCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHH--hcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144          325 STNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRN--FGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA  402 (502)
Q Consensus       325 ~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~--~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~  402 (502)
                      .....+..                         ...+...++...  ...+.+++..+++.++++++.+.|+++++.. .
T Consensus       254 ~~~~~~~~-------------------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~-~  307 (389)
T d2gb3a1         254 KLAQGRLA-------------------------PPLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKLEEHGLKR-F  307 (389)
T ss_dssp             HHHHHSCC-------------------------CCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCC-B
T ss_pred             hhhhcccc-------------------------ccccccccccccccccchhcccccccccccchhhhhhhhhhcccc-c
Confidence            11100100                         011222222222  2456778888889999999999999985443 3


Q ss_pred             cCCCeeE-EEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHH--HHhcCcEEEEeeeE-----CCEEEE
Q 037144          403 FPRNFSL-VCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLES--INVSGKVFMTHAIV-----GGIYVL  474 (502)
Q Consensus       403 ~~~~~~~-v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--l~~~g~~~~~~~~~-----~g~~~l  474 (502)
                      ..|..++ ++++++...                         ..++.+++.++  +..+|..+.++..+     .+..++
T Consensus       308 ~~p~~g~~~~~~lp~~~-------------------------~~~~~~~ll~e~~l~~~~v~v~pg~~f~~~~~~~~~~i  362 (389)
T d2gb3a1         308 TKPSGAFYITAELPVED-------------------------AEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEI  362 (389)
T ss_dssp             CCCSBSSEEEEECSSSC-------------------------HHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEE
T ss_pred             cCCCceEEEEEeCCCCC-------------------------HHHHHHHHHHhhhhhhCCEEEEeCcccccCCCCCCCEE
Confidence            3455444 444443221                         12333333332  11234333333322     136799


Q ss_pred             EEEecCCCCcHHHHHHHHHHHHHHHHhC
Q 037144          475 RFAAGNSMTMESHVRAAWTVVQEHLEAF  502 (502)
Q Consensus       475 R~~~~~~~t~~~di~~~~~~l~~~~~~~  502 (502)
                      |++++   .++++++++++.|.+..++|
T Consensus       363 Ris~~---~~~~~l~~a~~~L~~~lk~f  387 (389)
T d2gb3a1         363 RIACV---LEKDLLSRAIDVLMEGLKMF  387 (389)
T ss_dssp             EEECC---SCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEc---CCHHHHHHHHHHHHHHHHHh
Confidence            99985   46778999999998887753

>d2c0ra1 c.67.1.4 (A:2-362) Phosphoserine aminotransferase, PSAT {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Bacillus circulans, subsp. alkalophilus [TaxId: 1397]

Probab=99.78  E-value=2.8e-19  Score=177.30  Aligned_cols=338  Identities=10%  Similarity=-0.033  Sum_probs=201.7

Q ss_pred             cccccCCCCCCHHHHHHHHHHhhc-CC---CCcccc---cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCch
Q 037144           78 NYFAYFPATSSVAGIVGEMLSSGF-NV---VGLDWI---SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTC  150 (502)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~l~~~~-n~---~~~~~~---~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt  150 (502)
                      |-++|.|++...|..+.+.+...+ |.   +....+   -++.+.++.+++++.|++++|.+++.      ..+|++|++
T Consensus         3 ~~~~F~pGP~~vp~~V~eam~~~~~~~~~~~~~~~~~sHRs~ef~~~~~~~r~~l~~l~~~~~~~------~i~~~~gs~   76 (361)
T d2c0ra1           3 RAYNFNAGPAALPLEVLERAQAEFVDYQHTGMSIMEMSHRGAVYEAVHNEAQARLLALLGNPTGY------KVLFIQGGA   76 (361)
T ss_dssp             CCEECCSSSCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHTTCCSSE------EEEEESSHH
T ss_pred             CCcccCCCCcCCCHHHHHHHHHHHhhhcccCccccccCcCCHHHHHHHHHHHHHHHHHhCCCCCC------EEEEECCCc
Confidence            456777877776666666665443 32   211111   36888999999999999999998754      578888877


Q ss_pred             HHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCch--hHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHH
Q 037144          151 EALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHC--AFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDV  228 (502)
Q Consensus       151 ~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~--s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~  228 (502)
                      ++++.++......          ++.++++....++  .+.+.++..|.   .+..++.+..  ...+++.+++.+....
T Consensus        77 t~~~ea~~~~l~~----------~~~~~l~~~~g~~~~~~~~~~~~~g~---~~~~~~~~~~--~~~~~~~~~~~~~~~~  141 (361)
T d2c0ra1          77 STQFAMIPMNFLK----------EGQTANYVMTGSWASKALKEAKLIGD---THVAASSEAS--NYMTLPKLQEIQLQDN  141 (361)
T ss_dssp             HHHHHHHHHHHCC----------TTCEEEEEECSHHHHHHHHHHHHHSC---EEEEEECGGG--TTCSCCCGGGCCCCTT
T ss_pred             hHHHHHHHhcccc----------CCCceEEEeechhhhhhhhhhhhcCc---eeeeeccccc--cccchhhhhhhcccCc
Confidence            7776554433211          3344443333443  46678888999   8888888763  3677777776554332


Q ss_pred             hcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc
Q 037144          229 EAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD  308 (502)
Q Consensus       229 ~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~  308 (502)
                             ++   +.++.+|.+.|+++|.++|+++|++++||++++.+..+++..        ..|...++.||+++.|.+
T Consensus       142 -------~~---~v~~~tg~~~~~~~i~~~~~~~~al~~vDavss~g~~~id~~--------~~di~~~s~~k~~~~~~~  203 (361)
T d2c0ra1         142 -------AA---YLHLTSNETIEGAQFKAFPDTGSVPLIGDMSSDILSRPFDLN--------QFGLVYAGAQKNLGPSGV  203 (361)
T ss_dssp             -------EE---EEEEESEETTTTEECSSCCCCTTSCEEEECTTTTTSSCCCGG--------GCSEEEEETTTTTCCSSC
T ss_pred             -------ce---EEEEecccceecceEEEeeccCCceEEEEeeccccccccccc--------cceeEEEecccccccccC
Confidence                   22   235678899999999999999999999999998888877643        567777788999887665


Q ss_pred             ceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCC--CCc---hHHHHHHHH-hcHHHHHHHHHHH
Q 037144          309 CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRR--FRS---LKLWVVIRN-FGVANLRNFIRSH  382 (502)
Q Consensus       309 ~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~--~~a---l~~~~~l~~-~g~~g~~~~~~~~  382 (502)
                      .++++. ...... .-.....+.              ++..+.....+.  ...   ..+..+... ....+.....++.
T Consensus       204 ~~~~~~-~~~~~~-~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (361)
T d2c0ra1         204 TVVIVR-EDLVAE-SPKHLPTML--------------RYDTYVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQAN  267 (361)
T ss_dssp             EEEEEE-GGGSSS-CCTTSCGGG--------------CHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHH
T ss_pred             cEEEEE-hHHhhh-Ccccccccc--------------ccccccccccccccccceeeehhhhHHHhhhhccchHHHHHHH
Confidence            555444 332111 000000110              000000000000  011   111111111 2233444555666


Q ss_pred             HHHHHHHHHHHhcCCCeEE-ecCC--Ce-eEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc
Q 037144          383 VGMAKLFERLVTSDKRFEV-AFPR--NF-SLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS  458 (502)
Q Consensus       383 ~~la~~l~~~l~~~~~~~l-~~~~--~~-~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~  458 (502)
                      ...+..+............ ...+  .+ .+++|++++                            .....++.+.|.+.
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~rS~~~~~~~~~~----------------------------~~~~~~~~~~L~~~  319 (361)
T d2c0ra1         268 RKKASLIYDAIDQSGGFYRGCVDVDSRSDMNITFRLAS----------------------------EELEKEFVKASEQE  319 (361)
T ss_dssp             HHHHHHHHHHHHTSTTSSEESSCGGGBCSSEEEEECSC----------------------------HHHHHHHHHHHHHT
T ss_pred             HHHHHHhhhhhhhcccccccCCChhhccceEEEEECCC----------------------------cccHHHHHHHHHHC
Confidence            6666666666655433333 2222  23 457787753                            11235677777778


Q ss_pred             CcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          459 GKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       459 g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      |++..++  ++..+.+|++++++ ++.|||++|+++|++..++
T Consensus       320 GI~~~~G--~~~~g~~RIs~~~~-~~~edv~~Lv~~l~~~~~~  359 (361)
T d2c0ra1         320 GFVGLKG--HRSVGGLRASIYNA-VPYESCEALVQFMEHFKRS  359 (361)
T ss_dssp             TEESCBC--CTTTCSEEEECCTT-SCHHHHHHHHHHHHHHHHH
T ss_pred             CCEEecC--CCcCCeEEEEecCC-CCHHHHHHHHHHHHHHHHh
Confidence            8654333  12112399998755 5677999999999998764

>d1bjna_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Escherichia coli [TaxId: 562]

Probab=99.77  E-value=8.4e-20  Score=180.43  Aligned_cols=341  Identities=10%  Similarity=-0.046  Sum_probs=205.5

Q ss_pred             cccCCCCCCHHHHHHHHHHhhc-CCC---Ccccc---cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHH
Q 037144           80 FAYFPATSSVAGIVGEMLSSGF-NVV---GLDWI---SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEA  152 (502)
Q Consensus        80 ~~~~~~~~~~~~~~~~~l~~~~-n~~---~~~~~---~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a  152 (502)
                      |+|.|++...|..+.+.+...+ |.+   ...++   -++.+.++-+++++.+++++|.++..      ..+|++|++++
T Consensus         3 ~nF~pGP~~~p~~Vl~a~~~~~~~~~~~~~~~~~~sHRs~ef~~l~~~~r~~l~~l~~~~~~~------~v~~~~gs~t~   76 (360)
T d1bjna_           3 FNFSSGPAMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDLLNVPSNY------KVLFCHGGGRG   76 (360)
T ss_dssp             EECCSSSCCCCHHHHHHHHHTSSSGGGSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTE------EEEEESSHHHH
T ss_pred             EEeCCCCcCCCHHHHHHHHHHHhhhcccCccccccCcCCHHHHHHHHHHHHHHHHHhCCCCCC------EEEEECCchHH
Confidence            6777887777766766666544 322   11111   36788889899999999999998653      57888888877


Q ss_pred             HHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCch--hHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhc
Q 037144          153 LLCTLTAARDRVLKKIGRENISKLVVYSSDQTHC--AFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEA  230 (502)
Q Consensus       153 ~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~--s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~  230 (502)
                      ++.+.......          ++.++++....++  .+...++..|.   .++.+..+.+  ...+.+.+++.+...+  
T Consensus        77 ~~~a~~~~~~~----------~~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~--~~~~~~~~~~~~~~~~--  139 (360)
T d1bjna_          77 QFAAVPLNILG----------DKTTADYVDAGYWAASAIKEAKKYCT---PNVFDAKVTV--DGLRAVKPMREWQLSD--  139 (360)
T ss_dssp             HHHHHHHHHCT----------TCCEEEEEESSHHHHHHHHHHTTTSE---EEEEECEEEE--TTEEEECCGGGCCCCS--
T ss_pred             HHhhhhhcccc----------cccccceecccchhhhhHHHHhhcCc---cceeeccccC--CCcchhhhhhhhccCC--
Confidence            76654433221          4555655544443  23444455555   5666555432  2445555555443332  


Q ss_pred             CCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcce
Q 037144          231 ELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCC  310 (502)
Q Consensus       231 g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g  310 (502)
                          .++++++.+|.||...|++++.  ++.+++.+++|++.+.+....+..        .+|...++.||+++.|.+.+
T Consensus       140 ----~~v~v~~~~~~t~~~~~~~~i~--~~~~~~~v~vDa~~~~~~~~vd~~--------~~dv~~~ss~k~~~~~~~~~  205 (360)
T d1bjna_         140 ----NAAYMHYCPNETIDGIAIDETP--DFGADVVVAADFSSTILSRPIDVS--------RYGVIYAGAQKNIGPAGLTI  205 (360)
T ss_dssp             ----SCSCEEECSEETTTTEECCCCC--CCCTTCCEEEECTTTTTSSCCCGG--------GCSEEEEETTTTTSSTTCEE
T ss_pred             ----ceeEEEecccccccCcccccee--cccccceeeeeeeccccceeeeec--------cceeEEEEcccccccCCCce
Confidence                3567777889999998888775  466789999999998877766543        78999999999999998888


Q ss_pred             EEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCC---chHHHHHHHHhcHHHHHHHHHHHHHHHH
Q 037144          311 CLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFR---SLKLWVVIRNFGVANLRNFIRSHVGMAK  387 (502)
Q Consensus       311 ~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~---al~~~~~l~~~g~~g~~~~~~~~~~la~  387 (502)
                      ++++.+.....  ......+.....           .............   .......+......+.....++..+.+.
T Consensus       206 ~~~~~~~~~~~--~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (360)
T d1bjna_         206 VIVREDLLGKA--NIACPSILDYSI-----------LNDNGSMFNTPPTFAWYLSGLVFKWLKANGGVAEMDKINQQKAE  272 (360)
T ss_dssp             EEEEGGGCSCC--CTTSCGGGCHHH-----------HHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred             eEeeehhhhhc--cccCCcchhhHH-----------HHhhhhhccccccchHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence            88875543211  000101110000           0000000000100   0111222222334456667777777788


Q ss_pred             HHHHHHhcCCCeEEecCC---CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEE
Q 037144          388 LFERLVTSDKRFEVAFPR---NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMT  464 (502)
Q Consensus       388 ~l~~~l~~~~~~~l~~~~---~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~  464 (502)
                      ++.+.+...........+   ...+++|.+++..                            ....+.+.+.++|.+..+
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~rs~~v~~f~~~~~~----------------------------~~~~~~~~l~~~Gi~~~~  324 (360)
T d1bjna_         273 LLYGVIDNSDFYRNDVAKRNRSRMNVPFQLADSA----------------------------LDKLFLEESFAAGLHALK  324 (360)
T ss_dssp             HHHHHHHHCSSEECCBCGGGBCSSEEEEEESSGG----------------------------GHHHHHHHHHHTTEECCB
T ss_pred             HHHHhhhccccccccCCcccccceEEEEEcCCcc----------------------------cHHHHHHHHHHCCCEeec
Confidence            887777776444333222   2357888885321                            124566677778865443


Q ss_pred             eeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          465 HAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       465 ~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                      +.  +..+.+|+|+.+ .+++|||++|+++|++..++
T Consensus       325 G~--~~~g~~Ris~~~-~~t~edV~~li~~l~e~~~~  358 (360)
T d1bjna_         325 GH--RVVGGMRASIYN-AMPLEGVKALTDFMVEFERR  358 (360)
T ss_dssp             CC--TTTCSEEEECCT-TSCHHHHHHHHHHHHHHHHH
T ss_pred             CC--CccCeEEEEecC-CCCHHHHHHHHHHHHHHHHH
Confidence            31  111248999865 46777999999999998764

>d1b9ha_ c.67.1.4 (A:) 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase) {Amycolatopsis mediterranei [TaxId: 33910]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase)
species: Amycolatopsis mediterranei [TaxId: 33910]

Probab=99.77  E-value=2.9e-17  Score=163.88  Aligned_cols=333  Identities=13%  Similarity=0.076  Sum_probs=211.2

Q ss_pred             HHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCC
Q 037144           94 GEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENI  173 (502)
Q Consensus        94 ~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~  173 (502)
                      .+.+...++.+...+..+|...++|++    +++++|.+.         ++++++||.|+..|+.+..-+          
T Consensus        16 ~~~~~~~l~~g~~~~~~g~~v~~fE~~----~a~~~g~~~---------~v~~~SGt~Al~lal~~l~~~----------   72 (384)
T d1b9ha_          16 RNGLVRALEQGQWWRMGGDEVNSFERE----FAAHHGAAH---------ALAVTNGTHALELALQVMGVG----------   72 (384)
T ss_dssp             HHHHHHHHHTSCCBTTTCSHHHHHHHH----HHHHTTCSE---------EEEESCHHHHHHHHHHHTTCC----------
T ss_pred             HHHHHHHHHcCCeeecCCHHHHHHHHH----HHHHHCcCe---------EEEeCCHHHHHHHHHHHcCCC----------
Confidence            344555555544334567888888866    678888764         688999999998888764211          


Q ss_pred             CCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChh
Q 037144          174 SKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLK  253 (502)
Q Consensus       174 ~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~  253 (502)
                      ++++|+++..++.+...++...|.   .++.+++++. ++.+|++.+++.+.+.++      .|+   .++..|...+++
T Consensus        73 ~gdeVi~p~~t~~a~~~ai~~~g~---~p~~~d~~~~-~~~~d~~~~~~~i~~~tk------~i~---~~~~~g~~~d~~  139 (384)
T d1b9ha_          73 PGTEVIVPAFTFISSSQAAQRLGA---VTVPVDVDAA-TYNLDPEAVAAAVTPRTK------VIM---PVHMAGLMADMD  139 (384)
T ss_dssp             TTCEEEEESSSCTHHHHHHHHTTC---EEEEECBCTT-TCCBCHHHHHHHCCTTEE------EEC---CBCGGGCCCCHH
T ss_pred             CCCEEEEecccccccccccccccc---cccccccccc-ccccchhhhccccccccc------ccc---cccccccccccc
Confidence            678899999999999999999999   9999999864 689999999998876654      343   456888999999


Q ss_pred             HHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccC
Q 037144          254 PLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKN  333 (502)
Q Consensus       254 eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~  333 (502)
                      +|.++|++++++++.|+|++-+...-...   ......+.++++++.|.+.++ ..|++++.++................
T Consensus       140 ~i~~~~~~~~i~lieD~a~a~ga~~~g~~---~g~~g~~~~~Sf~~~K~i~~g-~GG~i~t~~~~~~~~~~~~~~~g~~~  215 (384)
T d1b9ha_         140 ALAKISADTGVPLLQDAAHAHGARWQGKR---VGELDSIATFSFQNGKLMTAG-EGGAVVFPDGETEKYETAFLRHSCGR  215 (384)
T ss_dssp             HHHHHHHHHTCCBCEECTTCTTCEETTEE---GGGSSSCEEEECCTTSSSCSS-SCEEEEECTTCHHHHHHHHHHTBTTC
T ss_pred             cchhhhhhhhhhhhhhhceecccccCCEe---cCcccccceeccccccccccc-ccchhhhhhHHHHHHHHHHHhcCCCC
Confidence            99999999999999999997765432211   111234567788899998654 45667777665432211100000000


Q ss_pred             ccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCC------e
Q 037144          334 EATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRN------F  407 (502)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~------~  407 (502)
                      ..       ....+....+...-|...+.+...+.  ..+.+.+.+++..++++++.+.|++++++.....+.      .
T Consensus       216 ~~-------~~~~~~~~~~G~n~rms~l~Aaig~~--qL~~ld~~~~~R~~~~~~y~~~L~~~~~i~~~~~~~~~~~~~~  286 (384)
T d1b9ha_         216 PR-------DDRRYFHKIAGSNMRLNEFSASVLRA--QLARLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSH  286 (384)
T ss_dssp             CT-------TCSSCCCCSCCCBCBCBHHHHHHHHH--HHTTHHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCC
T ss_pred             cc-------ccccccccccccccccccchhhhhhh--hhhhcccchhhhhhhhhhhhhhhhccccccccccccccccccc
Confidence            00       00000000111112233343333333  346678888999999999999999998876543211      2


Q ss_pred             eEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEE-EEeeeEC-----------------
Q 037144          408 SLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVF-MTHAIVG-----------------  469 (502)
Q Consensus       408 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~-~~~~~~~-----------------  469 (502)
                      ....|.+....                          .....++.+.|.+.|+-. +.+....                 
T Consensus       287 ~~~~~~~~~~~--------------------------~~~Rd~l~~~L~~~GI~~~~~y~plh~~~~~~~~~~~~~~~~~  340 (384)
T d1b9ha_         287 YMAMFRIPGLT--------------------------EERRNALVDRLVEAGLPAFAAFRAIYRTDAFWELGAPDESVDA  340 (384)
T ss_dssp             SEEEEECTTCC--------------------------HHHHHHHHHHHHHTTCCEEECCCCGGGSHHHHHSSCCSSCHHH
T ss_pred             ccccceecccc--------------------------cccHHHHHHHHHHCCCCeeeeCcchhcCHHHHhcCCCcccccc
Confidence            23445443221                          111246778888888632 1111000                 


Q ss_pred             -----------CEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144          470 -----------GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA  501 (502)
Q Consensus       470 -----------g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~  501 (502)
                                 ....+.+=+....|+++||++.++.|++++++
T Consensus       341 ~~~~~Pna~~l~~~~l~LP~~~~Lt~e~ei~~I~~~i~~~l~~  383 (384)
T d1b9ha_         341 IARRCPNTDAISSDCVWLHHRVLLAGEPELHATAEIIADAVAR  383 (384)
T ss_dssp             HHHTCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHH
T ss_pred             cccCCHHHHHHHhCEEEccCCCCCCCHHHHHHHHHHHHHHHhh
Confidence                       01246665433345578999999999997753

>d2r5ea1 c.67.1.1 (A:12-429) Kynurenine--oxoglutarate transaminase I {Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]

Probab=99.77  E-value=1.3e-17  Score=168.63  Aligned_cols=345  Identities=10%  Similarity=0.022  Sum_probs=216.2

Q ss_pred             HHHHHHHHHHhhcCCC---CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHH
Q 037144           89 VAGIVGEMLSSGFNVV---GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVL  165 (502)
Q Consensus        89 ~~~~~~~~l~~~~n~~---~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~  165 (502)
                      +|..+.+.+...+...   ...|....+..++.+.+++|+.+.+|.+...    ...+++|+|+++++..++.+..+   
T Consensus        40 ~p~~i~eal~~a~~~~~~~~~~Y~~~~G~~~lReaiA~~~~~~~g~~~~p----~~~I~it~G~~~al~~~~~~l~~---  112 (418)
T d2r5ea1          40 APKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTINP----MTEVLVTVGAYEALYATIQGHVD---  112 (418)
T ss_dssp             CCHHHHHHHHHHHTCSCGGGGSCCCTTCCHHHHHHHHHHHHHHHTSCCCT----TTSEEEESHHHHHHHHHHHHHCC---
T ss_pred             CCHHHHHHHHHHHhCCCccCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCc----cceEEEcCCCchhhhhhhhhccc---
Confidence            3566677776666433   2357777788899999999999999975320    02689999999999777766554   


Q ss_pred             HHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCC--------CcccCHHHHHHHHHHHHhcCCccEEE
Q 037144          166 KKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSS--------SYGLSAESVLSQINLDVEAELIPLFL  237 (502)
Q Consensus       166 ~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~--------~~~~d~~~Le~~i~~~~~~g~~p~~V  237 (502)
                              +++.|++....++.+...+...|.   +++.|++++++        .+.++.+.+++.....      +.++
T Consensus       113 --------~gd~vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~  175 (418)
T d2r5ea1         113 --------EGDEVIIIEPFFDCYEPMVKAAGG---IPRFIPLKPNKTGGTISSADWVLDNNELEALFNEK------TKMI  175 (418)
T ss_dssp             --------TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECEESCCSSCEEGGGEECCHHHHHHHCCTT------EEEE
T ss_pred             --------cccceeccccccchhhHHHHHcCC---eEEEEEecccccccchhhhhhhhhHHHHhhhhhcc------ccce
Confidence                    678888999999999999999999   99999986532        2567888877765443      3478


Q ss_pred             EEecCCccccccCC---hhHHHHHHHHhCCEEEeecccccccccCccchhh--hcCCCCCCeeEEccCCcCC-CCCcceE
Q 037144          238 CATVGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF--IDGVECVDSFSFNPHKWLF-TTLDCCC  311 (502)
Q Consensus       238 v~t~gtt~~G~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~-~p~~~g~  311 (502)
                      +++.++|+||.+-+   +++|+++|++||++++.|.+|.............  +.+...--.+..++.|.++ ....+|+
T Consensus       176 ~i~~p~NPtG~~~s~e~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~pGlRiG~  255 (418)
T d2r5ea1         176 IINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGW  255 (418)
T ss_dssp             EEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCGGGCCEE
T ss_pred             ecCCcCccccccccHHHHHHHhhhhhcCCeeeecccchhhhccCCCccccccccccccceeeeeecCCccccCCCccccc
Confidence            88899999999844   6678889999999999999997655432211111  1111111134457899987 4477888


Q ss_pred             EEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHH------hcHHHHHHHHHHHHHH
Q 037144          312 LWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRN------FGVANLRNFIRSHVGM  385 (502)
Q Consensus       312 ~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~------~g~~g~~~~~~~~~~l  385 (502)
                      ++..+. .+.. +.........                   .++.. ....+...+..      ...+.+.++.+++..+
T Consensus       256 ~~~~~~-~i~~-~~~~~~~~~~-------------------~~~~~-~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  313 (418)
T d2r5ea1         256 AYGPEA-LLKN-LQMVHQNCVY-------------------TCATP-IQEAIAVGFETELKRLKSPECYFNSISGELMAK  313 (418)
T ss_dssp             EESCHH-HHHH-HHHHHTTTTC-------------------SCCHH-HHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHH
T ss_pred             ccccch-hhhh-hhhccccccc-------------------ccccc-hhhhccccccccccccccchhhHHHHHHHHHHh
Confidence            766433 2221 1110000000                   00000 00111111111      1234567788888899


Q ss_pred             HHHHHHHHhcCCCeEEecCCCeeEEEE-EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcEEE
Q 037144          386 AKLFERLVTSDKRFEVAFPRNFSLVCF-RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKVFM  463 (502)
Q Consensus       386 a~~l~~~l~~~~~~~l~~~~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~  463 (502)
                      ++++.+.|++. |+++. +|+.+++.| .+.+...           ..+... ...    .....++.++|.++ |.+++
T Consensus       314 r~~l~~~L~~~-g~~~~-~P~gg~f~~~~~~~~~~-----------~~~~~~-~~~----~~~~~~~~~~ll~~~gV~v~  375 (418)
T d2r5ea1         314 RDYMASFLAEV-GMNPT-VPQGGYFMVADWSSLDS-----------KVDLTQ-ETD----ARKDYRFTKWMTKSVGLQGI  375 (418)
T ss_dssp             HHHHHHHHHHT-TCEEE-ECSBSSEEEEECGGGST-----------TCCGGG-CCC----SSHHHHHHHHHHHHHSEECB
T ss_pred             hhhHHhhHhhc-CCccc-CCCceeEEEEEcccccc-----------cccchh-ccc----ccCHHHHHHHHHHHCCEEEe
Confidence            99999999998 88876 566565555 4432100           000000 000    01123555555554 65544


Q ss_pred             EeeeEC-------CEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144          464 THAIVG-------GIYVLRFAAGNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       464 ~~~~~~-------g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~  500 (502)
                      ++..+.       +.+++|+|++   +++++|+++++.|++...
T Consensus       376 PG~~F~~~~~~~~g~~~iRis~~---~~~e~l~~a~~rl~~~lg  416 (418)
T d2r5ea1         376 PPSAFYSEPNKHLGEDFVRYCFF---KKDENLQKAAEILRKWKG  416 (418)
T ss_dssp             CGGGGSCGGGHHHHTTEEEEECC---SCHHHHHHHHHHHHHHHT
T ss_pred             CchhhCCCCCccCCCCEEEEEec---CCHHHHHHHHHHHHHHHc
Confidence            443332       2468999986   367799999999998764

>d1u08a_ c.67.1.1 (A:) Putative methionine aminotransferase YdbL {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative methionine aminotransferase YdbL
species: Escherichia coli [TaxId: 562]

Probab=99.76  E-value=1.4e-17  Score=166.16  Aligned_cols=330  Identities=11%  Similarity=0.052  Sum_probs=216.4

Q ss_pred             HHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHh
Q 037144           89 VAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKI  168 (502)
Q Consensus        89 ~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~  168 (502)
                      +|..+.+.+...++.....|....+..++.+.+++|+.+.+|.+...    ....++|+|+++++..++.+..+      
T Consensus        40 ~p~~i~~a~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~----~~~I~vt~G~~~al~~~~~~l~~------  109 (382)
T d1u08a_          40 GPRYLQERLAHHVAQGANQYAPMTGVQALREAIAQKTERLYGYQPDA----DSDITVTAGATEALYAAITALVR------  109 (382)
T ss_dssp             CCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHSCCCCT----TTTEEEESSHHHHHHHHHHHHCC------
T ss_pred             CCHHHHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHHHHHhCCCCCC----CceEEeccchHHHHHHHHhhccc------
Confidence            35567777776676666678888888999999999999999975321    12589999999999887776654      


Q ss_pred             CccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144          169 GRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA  248 (502)
Q Consensus       169 ~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~  248 (502)
                           +++.|+++...++.....+...|.   .+..++.+.+ ++.+|++++++++.+.+      .+++++.++|+||.
T Consensus       110 -----~gd~vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~~~~~~------~~i~l~~P~NPtG~  174 (382)
T d1u08a_         110 -----NGDEVICFDPSYDSYAPAIALSGG---IVKRMALQPP-HFRVDWQEFAALLSERT------RLVILNTPHNPSAT  174 (382)
T ss_dssp             -----TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECCTT-TCCCCHHHHHHHCCTTE------EEEEEESSCTTTCC
T ss_pred             -----ccceEEEecccccchhhhhhhccc---cceecccccc-cccCCHHHHhhhhccCc------cEEEECCCCccccc
Confidence                 677888888899999999999998   8888888753 57899999988776543      47888999999999


Q ss_pred             cCC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhc--CCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhh
Q 037144          249 VDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFID--GVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLS  322 (502)
Q Consensus       249 idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~--~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~  322 (502)
                      +-+   +++|+++|++++++++.|..|.-.............  ....--.+..++.|.++.| ..+|+++.. +..+..
T Consensus       175 v~~~~~~~~l~~~~~~~~~~ii~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~pG~RiG~~v~~-~~~~~~  253 (382)
T d1u08a_         175 VWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAP-APISAE  253 (382)
T ss_dssp             CCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECC-HHHHHH
T ss_pred             ccccccchhhhhhhccccceeeeecchhhccccccccccccccccccCcEEEEeeccccccCCcccchhhhcc-chhHHH
Confidence            955   566677788899999999988654432211111000  0001124566788888655 778887763 333221


Q ss_pred             hhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144          323 TLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA  402 (502)
Q Consensus       323 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~  402 (502)
                       +.....+...                    +........+..++.. +.+.+..+.+++.++++.+.+.+... ++++.
T Consensus       254 -~~~~~~~~~~--------------------~~~~~~q~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~~~~~-g~~~~  310 (382)
T d1u08a_         254 -IRKVHQYLTF--------------------SVNTPAQLALADMLRA-EPEHYLALPDFYRQKRDILVNALNES-RLEIL  310 (382)
T ss_dssp             -HHHHHHHHTS--------------------SCCHHHHHHHHHHHHH-CTHHHHTHHHHHHHHHHHHHHHTTSS-SCEEC
T ss_pred             -HHhhhccccc--------------------cccccccccccccccc-chHHHHHHHHHHHhhhhhhhhhhccC-CcEEe
Confidence             1111111110                    0000111222233332 56778888888889999999888765 78876


Q ss_pred             cCCCeeEEEEEeecC-cchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh-cCcEEEEeeeE----CCEEEEEE
Q 037144          403 FPRNFSLVCFRVTPS-AVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV-SGKVFMTHAIV----GGIYVLRF  476 (502)
Q Consensus       403 ~~~~~~~v~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~----~g~~~lR~  476 (502)
                       +|+.+++.|.-.+. ..                      .  +  ..++.++|.+ .|.+++++..+    .+..++|+
T Consensus       311 -~p~gg~~~~~~~~~~~~----------------------~--d--~~e~~~~ll~e~gV~v~PG~~F~~~~~~~~~~Ri  363 (382)
T d1u08a_         311 -PCEGTYFLLVDYSAVST----------------------L--D--DVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRL  363 (382)
T ss_dssp             -CCCBSSEEEEECTTTCC----------------------S--C--HHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEE
T ss_pred             -cCCceEEEEEecCCCCC----------------------C--C--HHHHHHHHHHHCCEEEEcchhhCCCCCCCCEEEE
Confidence             56666555433231 10                      0  0  2345555544 46655554433    24569999


Q ss_pred             EecCCCCcHHHHHHHHHHHHH
Q 037144          477 AAGNSMTMESHVRAAWTVVQE  497 (502)
Q Consensus       477 ~~~~~~t~~~di~~~~~~l~~  497 (502)
                      |++   +++++++++++.|++
T Consensus       364 s~~---~~~e~l~~al~RL~~  381 (382)
T d1u08a_         364 CFA---KKESTLLAAAERLRQ  381 (382)
T ss_dssp             ECC---SCHHHHHHHHHHHTT
T ss_pred             EEe---CCHHHHHHHHHHHhC
Confidence            986   366789999888765

>d1c7ga_ c.67.1.2 (A:) Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 549]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tyrosine phenol-lyase
species: Erwinia herbicola [TaxId: 549]

Probab=99.75  E-value=5.8e-17  Score=164.84  Aligned_cols=325  Identities=10%  Similarity=0.053  Sum_probs=185.6

Q ss_pred             CCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCC
Q 037144          103 VVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSD  182 (502)
Q Consensus       103 ~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~  182 (502)
                      ..-..|..+|...++|+.    +++++|.+.         ++++++||+||..++.+...           ++++|++..
T Consensus        66 ~GDd~Y~~dpt~~~lE~~----~a~l~G~e~---------al~~~SGt~An~~a~~~l~~-----------~Gd~Vi~~~  121 (456)
T d1c7ga_          66 IGDEAYAGSENFYHLEKT----VKELFGFKH---------IVPTHQGRGAENLLSQLAIK-----------PGQYVAGNM  121 (456)
T ss_dssp             SCCCCSSSCHHHHHHHHH----HHHHHCCSE---------EEEESSHHHHHHHHHHHHCC-----------TTEEEEESS
T ss_pred             ccchhccCCchHHHHHHH----HHHHhCCCe---------EEECCCHHHHHHHHHHHhcC-----------CCCeEecCc
Confidence            344568889999999977    567888874         68999999999888877643           677887764


Q ss_pred             CCchhHHHHHHHcCCCCCCEEEEecCC--------CCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccc----ccC
Q 037144          183 QTHCAFQKAAQIVGIDRKNIRAIKTTK--------SSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAIT----AVD  250 (502)
Q Consensus       183 ~~H~s~~~aa~~~Glg~~~v~~v~~~~--------~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G----~id  250 (502)
                      ..+ +........|.   ..+.+..+.        ...+.+|+++|+++|++..+.  .+.+|++...++..|    ..+
T Consensus       122 ~f~-~~~~~i~~~g~---~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~I~~~~~~--~~~~i~~e~~~n~~gG~~~~~~  195 (456)
T d1c7ga_         122 YFT-TTRFHQEKNGA---TFVDIVRDEAHDASLNLPFKGDIDLNKLATLIKEKGAE--NIAYICLAVTVNLAGGQPVSMA  195 (456)
T ss_dssp             CCH-HHHHHHHHTTE---EEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGG--GEEEEEEESSBTTTTSBCCCHH
T ss_pred             chH-HHHHHHHHcCc---eeeeccccccccccccCCccccCCHHHHHHHhhhcCCc--cceeEEeeecccccccceecHH
Confidence            433 33333455666   454443321        124689999999999886542  234666666666665    336


Q ss_pred             ChhHHHHHHHHhCCEEEeeccccccccc-----Cccchh-----hhc-CCCCCCeeEEccCCcCCCCCcceEEEeeCchh
Q 037144          251 PLKPLCDVAKQFGIWVHVDAAYAGSACI-----CPEFRH-----FID-GVECVDSFSFNPHKWLFTTLDCCCLWVKDPSC  319 (502)
Q Consensus       251 pl~eI~~i~~~~g~~lhVDaA~g~~~~~-----~~~~~~-----~~~-~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~  319 (502)
                      ++++|.++|++||+.+|+|+|+..+...     ...+..     ... -...+|++++++||.+++|.| |++++++...
T Consensus       196 ~l~~i~~~a~~~~~~~~~D~a~~~~~a~~~~~~~~~~~~~~i~~i~~~~~~~ad~~s~s~~K~~~~~~G-G~i~~~~~~l  274 (456)
T d1c7ga_         196 NMRAVHEMASTYGIKIFYDATRCVENAYFIKEQEAGYENVSIKDIVHEMFSYADGCTMSGKKDCLVNIG-GFLCMNDEEM  274 (456)
T ss_dssp             HHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEEEETTTTTCCSSC-EEEEESCHHH
T ss_pred             HHHHHHHHHHHcCCEEEEEcchhhcchhhhcccccccCCCChhhhccccccccccEEEeccccccccce-eEEEcCCHHH
Confidence            7899999999999999999998543211     011111     000 013689999999999988754 6777776654


Q ss_pred             hhhhhcCCcccccCccCCCCCcccccCCCcccccCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 037144          320 LLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKR  398 (502)
Q Consensus       320 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~  398 (502)
                      ..........+-...                 ..++.. ....++...+.....   .+.+++..+++++|.+.|.+. +
T Consensus       275 ~~~~r~~~~~~~g~~-----------------~~g~~~~~~~~a~a~~l~e~~~---~~~l~~r~~~~~~L~e~L~~~-g  333 (456)
T d1c7ga_         275 FSAAKELVVVYEGMP-----------------SYGGLAGRDMEAMAIGLREAMQ---YEYIEHRVKQVRYLGDKLREA-G  333 (456)
T ss_dssp             HHHHHHHHHHHTCCT-----------------TTTTCCHHHHHHHHHHHHHHTC---HHHHHHHHHHHHHHHHHHHHT-T
T ss_pred             HHHHHHhccccCCCc-----------------ccchhhHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHhc-c
Confidence            332211110000000                 000000 011222222222111   234556677888999999887 6


Q ss_pred             eEEecCCCeeEEEEEee--cCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeE--------
Q 037144          399 FEVAFPRNFSLVCFRVT--PSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIV--------  468 (502)
Q Consensus       399 ~~l~~~~~~~~v~f~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~--------  468 (502)
                      +.++.++....+.....  ....                  ..+......+   +.+.+.+.|.-.+.....        
T Consensus       334 ~~vv~p~g~~~v~vda~~~~~~i------------------~~~~~~~~~~---~~~l~~~~GIr~~~~g~~~~~~~~~~  392 (456)
T d1c7ga_         334 VPIVEPTGGHAVFLDARRFCPHL------------------TQDQFPAQSL---AASIYMETGVRSMERGIVSAGRSKET  392 (456)
T ss_dssp             CCBCSSCCSSEEEEEHHHHCTTS------------------CGGGCHHHHH---HHHHHHHHSEECEEESHHHHCBCSSS
T ss_pred             CCcccCCCCcceeEechhhccCC------------------CcccccHHHH---HHHHHHHhCeeecccCccccccCCcc
Confidence            77765544333322111  0000                  0000001112   222233446432221110        


Q ss_pred             -----CCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144          469 -----GGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       469 -----~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~  500 (502)
                           .....+|+++.....|++|||++++.|+++.+
T Consensus       393 g~~~~~~~e~vRLaip~~~~T~e~iD~Vae~i~~v~~  429 (456)
T d1c7ga_         393 GENHRPKLETVRLTIPRRVYTYAHMDVVADGIIKLYQ  429 (456)
T ss_dssp             CCBCCCSCCEEEEECCTTSCCHHHHHHHHHHHHHHHT
T ss_pred             cCccCCccceEEEecCcccCCHHHHHHHHHHHHHHHh
Confidence                 11236999985444478899999999999865

>d1w7la_ c.67.1.1 (A:) Kynurenine--oxoglutarate transaminase I {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=1.9e-17  Score=167.33  Aligned_cols=346  Identities=11%  Similarity=0.010  Sum_probs=215.4

Q ss_pred             HHHHHHHHHHhhcCCC--CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHH
Q 037144           89 VAGIVGEMLSSGFNVV--GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLK  166 (502)
Q Consensus        89 ~~~~~~~~l~~~~n~~--~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~  166 (502)
                      +|..+.+.+...+...  ...|....+..++.+.+++|+.+.+|.+-..    ...+++|+|+++++..++.+..+    
T Consensus        39 ~p~~v~~a~~~al~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~----~~~I~it~G~~~al~~~~~~l~~----  110 (418)
T d1w7la_          39 PPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEIDP----LRNVLVTVGGYGALFTAFQALVD----  110 (418)
T ss_dssp             CCHHHHHHHHHHTSSCGGGGSCCCTTCCHHHHHHHHHHHHHHHTCCCCH----HHHEEEESHHHHHHHHHHHHHCC----
T ss_pred             CCHHHHHHHHHHHhCCCcccCCCCCcCCHHHHHHHHHHHHHHhCCCCCc----ccceeeccCcHHHHHHHHHhhcc----
Confidence            3566777777766543  2357777788999999999999999986320    01589999999998777766544    


Q ss_pred             HhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCC----------CCcccCHHHHHHHHHHHHhcCCccEE
Q 037144          167 KIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKS----------SSYGLSAESVLSQINLDVEAELIPLF  236 (502)
Q Consensus       167 ~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~----------~~~~~d~~~Le~~i~~~~~~g~~p~~  236 (502)
                             +++.|++....+..+...+...|.   +++.++.++.          .++.+|.+++.....+.      ..+
T Consensus       111 -------~g~~vlv~~p~~~~y~~~~~~~g~---~~v~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~------~~~  174 (418)
T d1w7la_         111 -------EGDEVIIIEPFFDCYEPMTMMAGG---RPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSR------TKA  174 (418)
T ss_dssp             -------TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECEECC---CCSEEGGGEECCHHHHHHHCCTT------EEE
T ss_pred             -------CCceeeccccccchhHHHHHHcCC---EeeccccccccccccccccccCcccchhhhhcccccc------ccc
Confidence                   678888888899999999999999   8888886531          24667877776654433      347


Q ss_pred             EEEecCCcccccc---CChhHHHHHHHHhCCEEEeecccccccccCccchhhh--cCCCCCCeeEEccCCcCCC-CCcce
Q 037144          237 LCATVGTTAITAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFI--DGVECVDSFSFNPHKWLFT-TLDCC  310 (502)
Q Consensus       237 Vv~t~gtt~~G~i---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~--~~~~~aDsi~~~~hK~l~~-p~~~g  310 (502)
                      ++++.++|+||.+   +.+++|+++|++++++++.|.+|....+..+......  .+...--.+..++.|.++. ...+|
T Consensus       175 i~~~~p~NPtG~~~s~~~~~~i~~~a~~~~v~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~pG~RvG  254 (418)
T d1w7la_         175 LVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVG  254 (418)
T ss_dssp             EEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCGGGCCE
T ss_pred             eeccCcCCcccccccHHHHHHHHHHHHhcCCCchhhhhhHHhhcCCCCCCCHHHccccccccceecccCccccCCCCccc
Confidence            8889999999998   4578899999999999999999977654322211111  1111112556779998764 47788


Q ss_pred             EEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHH---h---cHHHHHHHHHHHHH
Q 037144          311 CLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRN---F---GVANLRNFIRSHVG  384 (502)
Q Consensus       311 ~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~---~---g~~g~~~~~~~~~~  384 (502)
                      +++..+. .+. .+.....+....                   .+.. ....+..++..   +   ..+.+....+++.+
T Consensus       255 ~~v~~~~-~~~-~l~~~~~~~~~~-------------------~~~~-~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  312 (418)
T d1w7la_         255 WVLGPDH-IMK-HLRTVHQNSVFH-------------------CPTQ-SQAAVAESFEREQLLFRQPSSYFVQFPQAMQR  312 (418)
T ss_dssp             EEECCHH-HHH-HHHHHHHTTTSC-------------------CCHH-HHHHHHHHHHHHHHTTTSTTSHHHHHHHHHHH
T ss_pred             ccccchh-hhh-hhcccccccccc-------------------ccch-hhHHHHHHhhhccccccccccccccchhhhhh
Confidence            8876433 221 111100000000                   0000 01111111111   1   13456677788888


Q ss_pred             HHHHHHHHHhcCCCeEEecCCCeeEEEE-EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh-cCcEE
Q 037144          385 MAKLFERLVTSDKRFEVAFPRNFSLVCF-RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV-SGKVF  462 (502)
Q Consensus       385 la~~l~~~l~~~~~~~l~~~~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~  462 (502)
                      +++.+.+.|.+. |+++. +|+.+++.| .+... ....           ..... ...  .....+++++|.+ .|.++
T Consensus       313 ~r~~l~~~L~~~-g~~~~-~P~gg~f~~~~~~~~-~~~~-----------~~~~~-~~~--~~~~~~~~~~ll~~~gV~v  375 (418)
T d1w7la_         313 CRDHMIRSLQSV-GLKPL-IPQGSYFLITDISDF-KRKM-----------PDLPG-AVD--EPYDRRFVKWMIKNKGLVA  375 (418)
T ss_dssp             HHHHHHHHHHTT-TCEEE-ECSBSSEEEEECHHH-HHHC-----------CCCCC-CTT--CCHHHHHHHHHHHHHCEEC
T ss_pred             hhhhhhhhhhhc-CCccc-CCCceeEEEEECccc-cccc-----------chhcc-ccc--cccHHHHHHHHHHHCCEEE
Confidence            999999999987 78876 455555544 33210 0000           00000 000  0112344555443 47665


Q ss_pred             EEeeeEC-------CEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144          463 MTHAIVG-------GIYVLRFAAGNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       463 ~~~~~~~-------g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~  500 (502)
                      +++..+.       +..++|+|++   ++++++++++++|+++..
T Consensus       376 ~PG~~F~~~~~~~~~~~~iRis~~---~~~~~l~~a~~rl~~~~~  417 (418)
T d1w7la_         376 IPVSIFYSVPHQKHFDHYIRFCFV---KDEATLQAMDEKLRKWKV  417 (418)
T ss_dssp             EEGGGGSCHHHHTTSCSEEEEECC---CCHHHHHHHHHHHHHHHC
T ss_pred             EcchhhcCCCccCCCCCEEEEEEc---CCHHHHHHHHHHHHHHhc
Confidence            5554332       3579999986   467899999999998754

>d2v1pa1 c.67.1.2 (A:5-471) Tryptophan indol-lyase (tryptophanase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Escherichia coli [TaxId: 562]

Probab=99.74  E-value=1.2e-16  Score=163.80  Aligned_cols=195  Identities=15%  Similarity=0.139  Sum_probs=129.8

Q ss_pred             CCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCC
Q 037144          103 VVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSD  182 (502)
Q Consensus       103 ~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~  182 (502)
                      .....|..+|...++|+.    +++++|.+.         ++++++||+||..|+.+++..........  ....+..+.
T Consensus        65 ~gd~~Y~~~~~~~~le~~----~a~l~G~~~---------~~~~~sGt~A~~~a~~~~~~~g~~~~~~~--~~~~i~~~~  129 (467)
T d2v1pa1          65 RGDEAFSGSRSYYALAES----VKNIFGYQY---------TIPTHQGRGAEQIYIPVLIKKREQEKGLD--RSKMVAFSN  129 (467)
T ss_dssp             SCCCCSSSCHHHHHHHHH----HHHHTCCSE---------EEEECSSTTTHHHHHHHHHHHHHHHHCCC--TTTCEEEES
T ss_pred             ccchhhcCCchHHHHHHH----HHHHHCCCE---------EEECCCCHHHHHHHHHHHhhccceEecCC--CCcEEEEec
Confidence            334457778888888865    688999863         68999999999999998877533221111  222344555


Q ss_pred             CCchhHHHHHHHcCCCCCCEEEEecCCC--------CCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccc-c---cC
Q 037144          183 QTHCAFQKAAQIVGIDRKNIRAIKTTKS--------SSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAIT-A---VD  250 (502)
Q Consensus       183 ~~H~s~~~aa~~~Glg~~~v~~v~~~~~--------~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G-~---id  250 (502)
                      ..|.....++.+.|.   .++.++.+..        ..+.+|+++|++++++.....  ..+|++...++..| .   .+
T Consensus       130 ~~~~~~~~~~~~~G~---~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~--~~~i~~e~~~~~~gg~~~~~~  204 (467)
T d2v1pa1         130 YFFDTTQGHSQINGC---TVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNN--VPYIVATITSNSAGGQPVSLA  204 (467)
T ss_dssp             SCCHHHHHHHHHTTC---EEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGG--CCCEEEESSBCGGGCBCCCHH
T ss_pred             ccccccHHHHHHcCC---eeeecccccccccccccccccCCCHHHHHHHHhhcCccc--cceeeecceeeccccccCCHH
Confidence            566777778888998   8888876532        136899999999998764422  22344443333333 3   36


Q ss_pred             ChhHHHHHHHHhCCEEEeecccccccccC-----ccchh-----hh-cCCCCCCeeEEccCCcCCCCCcceEEEeeCch
Q 037144          251 PLKPLCDVAKQFGIWVHVDAAYAGSACIC-----PEFRH-----FI-DGVECVDSFSFNPHKWLFTTLDCCCLWVKDPS  318 (502)
Q Consensus       251 pl~eI~~i~~~~g~~lhVDaA~g~~~~~~-----~~~~~-----~~-~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~  318 (502)
                      ++++|.++|++||++||+|+|+..+....     ..+.+     .. .-...+|+++++.||.+++|. .|+++.++..
T Consensus       205 ~l~~i~~ia~~~g~~l~~D~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~d~~s~s~~K~~~~~~-gg~i~~~~~~  282 (467)
T d2v1pa1         205 NLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDAMVPM-GGLLCMKDDS  282 (467)
T ss_dssp             HHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCSEEEEESSSTTCCSS-CEEEEECSGG
T ss_pred             HHHHHHHHHHHcCCEEEEechhhhccccccccccccccCCcccccchhhcccCCEEEecCCCCCCCCC-ceeEEecchh
Confidence            78999999999999999999985543211     11110     00 012379999999999998874 4555555543

>d1fg7a_ c.67.1.1 (A:) Histidinol-phosphate aminotransferase HisC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Escherichia coli [TaxId: 562]

Probab=99.73  E-value=2.1e-16  Score=155.99  Aligned_cols=284  Identities=10%  Similarity=0.067  Sum_probs=187.2

Q ss_pred             HHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCe-EEEeCCCCchhHHHHHHHcCCC
Q 037144          120 IVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKL-VVYSSDQTHCAFQKAAQIVGID  198 (502)
Q Consensus       120 ~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~-~v~~s~~~H~s~~~aa~~~Glg  198 (502)
                      ++++++++.+|++.+       .+++|+|+++++..++.+..+           +++ +|+++.+++..+...++..|. 
T Consensus        60 ~Lr~~ia~~~gv~pe-------~I~it~Gs~eai~~~~~~~~~-----------pgd~~Vl~~~P~y~~~~~~~~~~g~-  120 (354)
T d1fg7a_          60 AVIENYAQYAGVKPE-------QVLVSRGADEGIELLIRAFCE-----------PGKDAILYCPPTYGMYSVSAETIGV-  120 (354)
T ss_dssp             HHHHHHHHHHTSCGG-------GEEEESHHHHHHHHHHHHHCC-----------TTTCEEEECSSSCTHHHHHHHHHTC-
T ss_pred             HHHHHHHHHhCCChH-------HeeeccCchHHHHHHHHHhhc-----------cccccccccccccccchhhhhccCc-
Confidence            466778899999876       689999999998877766543           444 788888899999999999999 


Q ss_pred             CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHH--HhCCEEEeeccccccc
Q 037144          199 RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAK--QFGIWVHVDAAYAGSA  276 (502)
Q Consensus       199 ~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~--~~g~~lhVDaA~g~~~  276 (502)
                        +++.++.++  ++.+|++++++++.+       +.+|+.+.++|++|.+-+-+++..++.  +++.++++|.+|..+.
T Consensus       121 --~v~~~~~~~--~~~~d~~~l~~~~~~-------~~~v~~~~pnNPtG~~~~~~~~~~~~~~~~~~~~~iidd~~~~f~  189 (354)
T d1fg7a_         121 --ECRTVPTLD--NWQLDLQGISDKLDG-------VKVVYVCSPNNPTGQLINPQDFRTLLELTRGKAIVVADEAYIEFC  189 (354)
T ss_dssp             --EEEECCCCT--TSCCCHHHHHTSCTT-------EEEEEEESSCTTTCCCCCHHHHHHHHHHHTTTCEEEEECTTGGGS
T ss_pred             --eeecccccc--ccccchhhhhhcccc-------cceeeccCCCccceeEeeecccccccccccccccccccccchhhc
Confidence              999888864  689999999876631       348889999999999977555444433  3578888888875543


Q ss_pred             ccCccchhhhcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCC
Q 037144          277 CICPEFRHFIDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLC  355 (502)
Q Consensus       277 ~~~~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~s  355 (502)
                      ... .... ......--.+.-+++|.++ ....+|+++. +++...........|-.                       
T Consensus       190 ~~~-~~~~-~~~~~~~~iv~~S~SK~~~laGlRiGy~i~-~~~~i~~l~~~~~~~~~-----------------------  243 (354)
T d1fg7a_         190 PQA-SLAG-WLAEYPHLAILRTLSKAFALAGLRCGFTLA-NEEVINLLMKVIAPYPL-----------------------  243 (354)
T ss_dssp             GGG-CSGG-GTTTCTTEEEEEESSSTTCCGGGCCEEEEE-CHHHHHHHHHHSCSSCS-----------------------
T ss_pred             ccc-ccch-hhcccccceEEeCCccccCCCccccccccc-cchhhhhhhhhcCccch-----------------------
Confidence            211 1111 1111122245568999997 4466787764 44443322111111100                       


Q ss_pred             CCCCchHHHHHHHHhc---HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCc
Q 037144          356 RRFRSLKLWVVIRNFG---VANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTY  432 (502)
Q Consensus       356 r~~~al~~~~~l~~~g---~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~  432 (502)
                         .......+...+.   .+.+...+++..+.++++.+.+.+++++..+.++..+.+.++...                
T Consensus       244 ---~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~~~~~~~~~~p~~~~f~~~~~~~----------------  304 (354)
T d1fg7a_         244 ---STPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQVFDSETNYILARFKA----------------  304 (354)
T ss_dssp             ---CHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCCSSSEEEEEETT----------------
T ss_pred             ---hhHHHHHHHHHHhhhccccccccchhhhhHHHHHHHHHHhCCCcceeCCCCceEEEEeCCC----------------
Confidence               1112222222222   234456667778888999999999988776656666666665531                


Q ss_pred             ccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC-CEEEEEEEecCCCCcHHHHHHHHHHHHH
Q 037144          433 DQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG-GIYVLRFAAGNSMTMESHVRAAWTVVQE  497 (502)
Q Consensus       433 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-g~~~lR~~~~~~~t~~~di~~~~~~l~~  497 (502)
                                     ..++.+.|.++|.++..+..+. ..+++|++++    ++++.++++++|+.
T Consensus       305 ---------------~~~~~~~L~~~gIlvr~~~~~~~~~~~lRisig----t~ee~~~~l~aLka  351 (354)
T d1fg7a_         305 ---------------SSAVFKSLWDQGIILRDQNKQPSLSGCLRITVG----TREESQRVIDALRA  351 (354)
T ss_dssp             ---------------HHHHHHHHHHTTEECEECTTSTTCTTEEEEECC----CHHHHHHHHHHHHT
T ss_pred             ---------------HHHHHHHHHHCCcEEecCCCCCCCCCEEEEEeC----CHHHHHHHHHHHhh
Confidence                           2356777778887655544432 2569999985    45689999999873

>d2aeua1 c.67.1.8 (A:9-374) Hypothetical protein MJ0158 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SelA-like
domain: Hypothetical protein MJ0158
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.72  E-value=1.9e-17  Score=164.19  Aligned_cols=163  Identities=17%  Similarity=0.124  Sum_probs=116.1

Q ss_pred             HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeC-CCCchhHHHHHHHc
Q 037144          117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSS-DQTHCAFQKAAQIV  195 (502)
Q Consensus       117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s-~~~H~s~~~aa~~~  195 (502)
                      ++.++.+...+.++..+..      ..++|+||++|++.++.+. ..          ++.+++++ ..+|.++..++++.
T Consensus        51 ~~~~l~~~~~~~~~~~~~e------~~~~~~~~~~a~~~~l~al-~~----------~~~vi~~~~~~~~~~~~~~~~l~  113 (366)
T d2aeua1          51 FAEKVNEYGLKHLGGDEND------KCVGFNRTSSAILATILAL-KP----------KKVIHYLPELPGHPSIERSCKIV  113 (366)
T ss_dssp             HHHHHHHHHHHHHTCCTTE------EEEEESSHHHHHHHHHHHH-CC----------SEEEEECSSSSCCTHHHHHHHHT
T ss_pred             hHHHHHHHHHHHccCCCcc------EEEEeCCHHHHHHHHHHHh-CC----------CCEEEEecCCCcchhHHHHHHhc
Confidence            3445556666667665432      5889999999998777653 21          44555555 46899999999999


Q ss_pred             CCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcc-ccccCChhHHHHHHHHhCCEEEeeccccc
Q 037144          196 GIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTA-ITAVDPLKPLCDVAKQFGIWVHVDAAYAG  274 (502)
Q Consensus       196 Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~-~G~idpl~eI~~i~~~~g~~lhVDaA~g~  274 (502)
                      |.   ++  ++.+       |+++|+++|+++++      +|+++.++|+ ++.+++|++|+++|++||+|+++|++|+.
T Consensus       114 g~---~~--v~~~-------d~e~l~~~i~~~tk------~i~~~~p~n~~~~~~~~l~~i~~ia~~~~~~~i~De~y~~  175 (366)
T d2aeua1         114 NA---KY--FESD-------KVGEILNKIDKDTL------VIITGSTMDLKVIELENFKKVINTAKNKEAIVFVDDASGA  175 (366)
T ss_dssp             TC---EE--EEES-------CHHHHHTTCCTTEE------EEEECBCTTSCBCCHHHHHHHHHHHHHHTCCEEEECTTHH
T ss_pred             CC---eE--ECCC-------CHHHHHHhcCCCce------EEEEEecCCCCcCCHHHHHHHHHHhccCcEEEEEecCccc
Confidence            98   54  4432       78999999987654      7777777664 55788999999999999999999999976


Q ss_pred             ccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCc
Q 037144          275 SACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDP  317 (502)
Q Consensus       275 ~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~  317 (502)
                      +.+..........  .++|.++.+.||+++++ ..|+++.++.
T Consensus       176 ~~~~~~~~~~~~~--~~~di~~~S~sK~~~g~-~~G~i~~~~~  215 (366)
T d2aeua1         176 RVRLLFNQPPALK--LGADLVVTSTDKLMEGP-RGGLLAGKKE  215 (366)
T ss_dssp             HHHHHTTCCCHHH--HTCSEEEEETTSSSSSC-SCEEEEEEHH
T ss_pred             cccccccCCCHhh--cCceEEEeccccccccc-ceeEEEecHH
Confidence            6543111100000  16899999999988755 5777776543

>d1ax4a_ c.67.1.2 (A:) Tryptophan indol-lyase (tryptophanase) {Proteus vulgaris [TaxId: 585]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Proteus vulgaris [TaxId: 585]

Probab=99.70  E-value=1.7e-15  Score=154.98  Aligned_cols=332  Identities=12%  Similarity=0.055  Sum_probs=183.2

Q ss_pred             cccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCc
Q 037144          106 LDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTH  185 (502)
Q Consensus       106 ~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H  185 (502)
                      ..|..+|...++|+.    +++++|.+         .+++++|||+||..|+.++++..-..    +..+..++.+...|
T Consensus        69 ~~y~~~~~~~~le~~----~a~l~g~~---------~~~~~~sGt~A~~~a~~~~~~~g~~~----~~~~~~~i~~~~h~  131 (465)
T d1ax4a_          69 EAYAGSRNYYDLKDK----AKELFNYD---------YIIPAHQGRGAENILFPVLLKYKQKE----GKAKNPVFISNFHF  131 (465)
T ss_dssp             CCSSSCHHHHHHHHH----HHHHHCCC---------EEEEESSHHHHHHHHHHHHHHHHHHT----TCCSSCEEEESSCC
T ss_pred             hhhccChHHHHHHHH----HHHHHCCC---------EEEECCCcHHHHHHHHHHHHHHHHhc----CCCCCeEEeccchh
Confidence            457777887788765    56788875         37999999999999999998753221    11333344454444


Q ss_pred             hhHHHHHHHcCCCCCCEEEEecC--------CCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccc-cc---CChh
Q 037144          186 CAFQKAAQIVGIDRKNIRAIKTT--------KSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAIT-AV---DPLK  253 (502)
Q Consensus       186 ~s~~~aa~~~Glg~~~v~~v~~~--------~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G-~i---dpl~  253 (502)
                      .+....+...|.   ..+.++..        ....+.+|+++|+++|++....  .+.+++.+...+..| ..   ++|+
T Consensus       132 ~t~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~l~  206 (465)
T d1ax4a_         132 DTTAAHVELNGC---KAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGAD--NIVAIVSTVTCNSAGGQPVSMSNLK  206 (465)
T ss_dssp             HHHHHHHHHTTC---EEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGG--GEEEEEEESSBTTTTSBCCCHHHHH
T ss_pred             hhhHHHHHHcCC---eeecccccccCCCCCCCCccCccCHHHHHHHHHhhccc--cccceeeccccccCceecCCHHHHH
Confidence            556556667776   55544321        1235789999999999875432  233444444333333 22   5688


Q ss_pred             HHHHHHHHhCCEEEeecccccccccC-----c-----cchhhh-cCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhh
Q 037144          254 PLCDVAKQFGIWVHVDAAYAGSACIC-----P-----EFRHFI-DGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLS  322 (502)
Q Consensus       254 eI~~i~~~~g~~lhVDaA~g~~~~~~-----~-----~~~~~~-~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~  322 (502)
                      +|.++|++||++||+|+|+..+....     +     ...... .-...+|+++++.||.++.|. .|++++++......
T Consensus       207 ~i~~~~~~~g~~l~~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~d~~s~s~~k~~~~~~-~g~l~~~~~~~~~~  285 (465)
T d1ax4a_         207 EVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDPLLNI-GGLVAIRDNEEIFT  285 (465)
T ss_dssp             HHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCSEEEEETTSTTCCSS-CEEEEESSCHHHHH
T ss_pred             HHHHHHHHcCCEEEEECcchhhhhcccccccccccccchhhhccccccccceeEeecccCccccc-ceeEeecchHHHHH
Confidence            99999999999999999986432211     0     011100 012258999999999988775 47777776533221


Q ss_pred             hhcC-CcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHH-HHHHHHHHHHHHHHHHHHHhcCCCeE
Q 037144          323 TLST-NPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVAN-LRNFIRSHVGMAKLFERLVTSDKRFE  400 (502)
Q Consensus       323 ~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g-~~~~~~~~~~la~~l~~~l~~~~~~~  400 (502)
                      .... ...+....                    +....+.....++.....+. ....+++..+++++|.+.|++. ++.
T Consensus       286 ~~~~~~~~~~~~~--------------------~~~~~~~~~~~a~~~~~~e~~~~~~~~~~~~~~~~l~~~L~~~-g~~  344 (465)
T d1ax4a_         286 LARQRCVPMEGFV--------------------TYGGLAGRDMAAMVQGLEEGTEEEYLHYRIGQVKYLGDRLREA-GIP  344 (465)
T ss_dssp             HHHHHHHHHTCST--------------------TTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHT-TCC
T ss_pred             hhhccccccccCC--------------------CcchhhHHHHHHHhhhhHHhhhHHHHHHHHHHHHHHHHHHHhh-cCc
Confidence            1100 00000000                    00011112222222211221 2345666777889999999987 677


Q ss_pred             EecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeee-------------
Q 037144          401 VAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAI-------------  467 (502)
Q Consensus       401 l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-------------  467 (502)
                      ++.+.....+.+..... ...               .........   ..+.+.+.+.|...+....             
T Consensus       345 ~v~~~~~~~~~~~~~~~-~~~---------------~~~~~~~~~---~~~~~ll~~~GI~~~~~~~~~~~~~~~~g~~~  405 (465)
T d1ax4a_         345 IQYPTGGHAVFVDCKKL-VPQ---------------IPGDQFPAQ---AVINALYLESGVRAVEIGSFLLGRDPATGEQK  405 (465)
T ss_dssp             BCSSCCSSEEEEESTTT-CTT---------------SCGGGCHHH---HHHHHHHHHHCEECEEESHHHHCBCTTTCSBC
T ss_pred             cccCCCcceeeeehhhh-cCC---------------CccccchhH---HHHHHHHHhcCceeccccccccccccccCCcc
Confidence            76554433333222110 000               000000001   1222333444643222110             


Q ss_pred             ECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144          468 VGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       468 ~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~  500 (502)
                      ......+|+++.-...|++|||+++++|.++.+
T Consensus       406 ~~~~~~vRlalP~~~~T~eeiD~vv~~l~~v~~  438 (465)
T d1ax4a_         406 HADMEFMRLTIARRVYTNDHMDYIADALIGLKE  438 (465)
T ss_dssp             CCSCCEEEEECCTTSSCHHHHHHHHHHHHTTHH
T ss_pred             CCCCCceEEeCCCCCCCHHHHHHHHHHHHHHHH
Confidence            011347999863223377899999999998865

>d1kl1a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.69  E-value=8.9e-16  Score=149.16  Aligned_cols=338  Identities=12%  Similarity=0.068  Sum_probs=213.3

Q ss_pred             ccccCCCCCCHHHHHHHHHHhhc-CCCCcc------cccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchH
Q 037144           79 YFAYFPATSSVAGIVGEMLSSGF-NVVGLD------WISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCE  151 (502)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~l~~~~-n~~~~~------~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~  151 (502)
                      .+...++-...+..+.+.+.+.+ |.+.-+      |....-..++|..+++...++||+...        -+=..||+.
T Consensus        25 ~l~LiaSEN~~S~~v~~a~~S~l~nkyaeG~pg~ryy~G~~~id~iE~la~~ra~~lF~a~~a--------nVqp~SGs~   96 (405)
T d1kl1a_          25 KIELIASENFVSRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLFGAEHA--------NVQPHSGAQ   96 (405)
T ss_dssp             SEECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHCCSEE--------ECCCSSHHH
T ss_pred             CceEeccCCcCCHHHHHHhcCcccCcCcCCCCCccccCCchhHHHHHHHHHHHHHHHhCCCcc--------eeeccCchH
Confidence            34444544444455666666655 544332      334456789999999999999998532        233457899


Q ss_pred             HHHHHHHHHHHHHHHHhCccCCCCeEEEeCC---CCchhHHHHHHH--cCCCCCCEEEEecCCCCCcccCHHHHHHHHHH
Q 037144          152 ALLCTLTAARDRVLKKIGRENISKLVVYSSD---QTHCAFQKAAQI--VGIDRKNIRAIKTTKSSSYGLSAESVLSQINL  226 (502)
Q Consensus       152 a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~---~~H~s~~~aa~~--~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~  226 (502)
                      ||+....+..+           |++.|+.-+   -+|.+.-.....  ...   +++..|++++ ++.+|.+++++.+++
T Consensus        97 An~av~~all~-----------pGD~im~l~l~~GGHlshg~~~~~~g~~~---~~~~y~~d~~-~~~ID~d~l~~~a~~  161 (405)
T d1kl1a_          97 ANMAVYFTVLE-----------HGDTVLGMNLSHGGHLTHGSPVNFSGVQY---NFVAYGVDPE-THVIDYDDVREKARL  161 (405)
T ss_dssp             HHHHHHHHHCC-----------TTCEEEEECGGGTCCGGGTCTTSHHHHHS---EEEEECBCTT-TCSBCHHHHHHHHHH
T ss_pred             HHHHHHHHhcC-----------CCCEEEEeecccccccccCccccccceEE---EEEEeccchh-cccccHHHHHHHHHh
Confidence            99766555543           677776543   457665433222  234   6777788864 579999999999876


Q ss_pred             HHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC
Q 037144          227 DVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT  306 (502)
Q Consensus       227 ~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p  306 (502)
                      .+     |.+|++  |.+..-..-|++++.+||++.|+++++|+||-.+......+...   ++.+|++|.+.||+|.+|
T Consensus       162 ~k-----PklIi~--G~S~y~r~~d~~~~reIad~vga~l~~D~aH~~GLIa~g~~~~P---~~~aDvvt~tThKtlrGP  231 (405)
T d1kl1a_         162 HR-----PKLIVA--AASAYPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNP---VPYAHFVTTTTHKTLRGP  231 (405)
T ss_dssp             HC-----CSEEEE--CCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCS---TTTCSEEEEESSSTTCCC
T ss_pred             hC-----cceEEe--cccccccccChHHHHHHHhhhCCEEecchhhHhhhhhhhhcCCh---hhhhhheeccccccccCC
Confidence            53     656655  33344455679999999999999999999997776655444333   348999999999999999


Q ss_pred             CcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCc-hHHHHHHHHhcHHHHHHHHHHHHHH
Q 037144          307 LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRS-LKLWVVIRNFGVANLRNFIRSHVGM  385 (502)
Q Consensus       307 ~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~a-l~~~~~l~~~g~~g~~~~~~~~~~l  385 (502)
                      . +|+++++++ .........-+.                     ++++-.... .+...+++......+++..++..++
T Consensus       232 r-gg~I~~~~~-~~~~i~~avfPg---------------------~qggp~~~~iAa~Aval~Ea~~~~fk~Ya~qvv~N  288 (405)
T d1kl1a_         232 R-GGMILCQEQ-FAKQIDKAIFPG---------------------IQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDN  288 (405)
T ss_dssp             S-CEEEEECHH-HHHHHHHHHTTT---------------------TCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHH
T ss_pred             C-CceEEecch-hHHHHHhhhCcc---------------------cccCcchhHHHHHHHHHHHHhChHHHHHHHHHHHH
Confidence            5 566666543 222111111011                     112212122 2333445443456778899999999


Q ss_pred             HHHHHHHHhcCCCeEEecC-CCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEE
Q 037144          386 AKLFERLVTSDKRFEVAFP-RNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMT  464 (502)
Q Consensus       386 a~~l~~~l~~~~~~~l~~~-~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~  464 (502)
                      |+.|.+.|.+. |+.++.. .+..++.+.+.+.+..                        ..   +..+.|.+.|+..-.
T Consensus       289 AkaLa~~L~~~-G~~vv~ggTd~H~vlvdl~~~~~~------------------------g~---~ae~~Le~agI~~Nk  340 (405)
T d1kl1a_         289 AKRLASALQNE-GFTLVSGGTDNHLLLVDLRPQQLT------------------------GK---TAEKVLDEVGITVNK  340 (405)
T ss_dssp             HHHHHHHHHHT-TCEEGGGSCSSSEEEEECGGGTCC------------------------HH---HHHHHHHHHTEECEE
T ss_pred             HHHHHHHHhcC-CceeecCCCccceeeccccccCCc------------------------HH---HHHHHHHHcCeEEcC
Confidence            99999999987 8999853 3456777776554321                        11   222233334754322


Q ss_pred             eeeEC------CEEEEEEEec---CCCCcHHHHHHHHHHHHHHHH
Q 037144          465 HAIVG------GIYVLRFAAG---NSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       465 ~~~~~------g~~~lR~~~~---~~~t~~~di~~~~~~l~~~~~  500 (502)
                      -+...      ....||+...   ...-.++|+.++.+.|.++.+
T Consensus       341 n~iP~d~~~~~~~SGiRiGT~a~TtrG~~e~dm~~ia~~I~~~l~  385 (405)
T d1kl1a_         341 NTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLK  385 (405)
T ss_dssp             CCCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHT
T ss_pred             CcCCCCCCCCCCCCceeecCHHHHhCCCCHHHHHHHHHHHHHHHh
Confidence            11111      1246999863   233467899999998887764

>d2f8ja1 c.67.1.1 (A:1-334) Histidinol-phosphate aminotransferase HisC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Thermotoga maritima [TaxId: 2336]

Probab=99.69  E-value=3.1e-14  Score=138.98  Aligned_cols=300  Identities=10%  Similarity=-0.017  Sum_probs=188.6

Q ss_pred             HHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHh
Q 037144           89 VAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKI  168 (502)
Q Consensus        89 ~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~  168 (502)
                      +|..+.+.+...++.....|...++..++.+++.+|+... +.+.+       .+++|+|+++++...+    .      
T Consensus        33 ~p~~i~~~~~~~~~~~~~~~yp~~g~~~Lr~aia~~~~~~-~v~~d-------~I~it~G~~~~l~~l~----~------   94 (334)
T d2f8ja1          33 FPEDLVDEVFRRLNSDALRIYYDSPDEELIEKILSYLDTD-FLSKN-------NVSVGNGADEIIYVMM----L------   94 (334)
T ss_dssp             CCHHHHHHHHHHCCTTGGGSCCCSSCHHHHHHHHHHHTCS-SCCGG-------GEEEEEHHHHHHHHHH----H------
T ss_pred             CCHHHHHHHHHHhhcchhcCCCCCCcHHHHHHHHHHhccc-CCCcc-------eEEecCcchhHHHHHh----h------
Confidence            3455566666667666555555566778888888877543 34443       5888988887765432    2      


Q ss_pred             CccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144          169 GRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA  248 (502)
Q Consensus       169 ~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~  248 (502)
                           ..+.|++.++++..+..+++.+|+   +++.||++++.  ..+-     +.      ..++.+++++.++|++|.
T Consensus        95 -----~~d~v~i~~P~y~~~~~~~~~~g~---~~v~v~~~~~~--~~~~-----~~------~~~~~~l~l~nP~NPtG~  153 (334)
T d2f8ja1          95 -----MFDRSVFFPPTYSCYRIFAKAVGA---KFLEVPLTKDL--RIPE-----VN------VGEGDVVFIPNPNNPTGH  153 (334)
T ss_dssp             -----HSSEEEECSSCCHHHHHHHHHHTC---CEEECCCCTTS--CCCC-----CC------CCTTEEEEEESSCTTTCC
T ss_pred             -----hccccccccccccccccchhccCC---ccccccccccc--cccc-----cc------cccceEEEecccccccce
Confidence                 134577788899999999999999   99999998642  3321     01      112347788889999999


Q ss_pred             cCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCC
Q 037144          249 VDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTN  327 (502)
Q Consensus       249 idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~  327 (502)
                      +-+.++|.+++ ++++++++|.+|..........  .... ..--.++.++.|.++.| ..+|+++. ++..........
T Consensus       154 ~~s~~~l~~~~-~~~~~ii~Dd~~~~~~~~~~~~--~~~~-~~~~i~~~S~SK~~~~~G~R~G~~~~-~~~~i~~l~~~~  228 (334)
T d2f8ja1         154 VFEREEIERIL-KTGAFVALDEAYYEFHGESYVD--FLKK-YENLAVIRTFSKAFSLAAQRVGYVVA-SEKFIDAYNRVR  228 (334)
T ss_dssp             CCCHHHHHHHH-TTTCEEEEECTTGGGTCCCCGG--GGGT-CSSEEEEEESTTTSSCTTTCEEEEEE-CHHHHHHHHHHS
T ss_pred             eecHHHhhccc-cceeEEeecccchhhccccccc--cccc-CceEEEEecCccccchhhhhhhhccc-chHHHHHHHHhh
Confidence            99988888765 5789999998875433221111  1111 11225567899998755 56777776 443332221111


Q ss_pred             cccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCe
Q 037144          328 PQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNF  407 (502)
Q Consensus       328 ~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~  407 (502)
                      . +.                     ..+. .....++..+.  ..+.+.+..+++.+.++++.+.|+++ |+++. ++..
T Consensus       229 ~-~~---------------------~~s~-~~~~~a~~~l~--~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~-~~~g  281 (334)
T d2f8ja1         229 L-PF---------------------NVSY-VSQMFAKVALD--HREIFEERTKFIVEERERMKSALREM-GYRIT-DSRG  281 (334)
T ss_dssp             C-TT---------------------CSCH-HHHHHHHHHHH--THHHHHHHHHHHHHHHHHHHHHHHHH-TCEEC-CCCS
T ss_pred             c-cc---------------------ccch-hhhhhcccccc--cccchhhHHHHHHHHHHHHHHHHHHC-CCeEC-CCCc
Confidence            0 00                     0000 01111222222  35677788888899999999999998 78886 5666


Q ss_pred             eEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHH
Q 037144          408 SLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESH  487 (502)
Q Consensus       408 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~d  487 (502)
                      +.+.+.+..                             ....++.+.|.++|.++ .+  +  ..++|++++    +.++
T Consensus       282 ~f~~~~~~~-----------------------------~~~~~~~~~L~~~GI~v-r~--~--~~~vRis~g----~~ee  323 (334)
T d2f8ja1         282 NFVFVFMEK-----------------------------EEKERLLEHLRTKNVAV-RS--F--REGVRITIG----KREE  323 (334)
T ss_dssp             SEEEEECCH-----------------------------HHHHHHHHHHHHTTEEC-EE--E--TTEEEEECC----CHHH
T ss_pred             eEEEEECCC-----------------------------CCHHHHHHHHHHCCCEE-CC--C--CCeEEEEcC----CHHH
Confidence            655444321                             11356778888888643 22  2  358999985    3458


Q ss_pred             HHHHHHHHHH
Q 037144          488 VRAAWTVVQE  497 (502)
Q Consensus       488 i~~~~~~l~~  497 (502)
                      +++++++|++
T Consensus       324 ~~~l~~~l~~  333 (334)
T d2f8ja1         324 NDMILRELEV  333 (334)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHhc
Confidence            8999988865

>d1y4ia1 c.67.1.3 (A:2-398) Methionine gamma-lyase, MGL {Citrobacter freundii [TaxId: 546]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Citrobacter freundii [TaxId: 546]

Probab=99.67  E-value=8.8e-15  Score=143.87  Aligned_cols=237  Identities=15%  Similarity=0.211  Sum_probs=170.0

Q ss_pred             ccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCch
Q 037144          107 DWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHC  186 (502)
Q Consensus       107 ~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~  186 (502)
                      .-...|....+|+.    ++.+-|..         .+++++||..|+..++.+...           +++.|+++...|.
T Consensus        58 ~R~~nPT~~~LE~~----la~LEgg~---------~a~~~sSGmaAi~~~l~~ll~-----------~Gd~vi~~~~~Yg  113 (397)
T d1y4ia1          58 TRLGNPTTDALEKK----LAVLERGE---------AGLATASGISAITTTLLTLCQ-----------QGDHIVSASAIYG  113 (397)
T ss_dssp             CTTSCHHHHHHHHH----HHHHHTCS---------EEEEESSHHHHHHHHHHHHCC-----------TTCEEEEESSSCH
T ss_pred             eCCCCHHHHHHHHH----HHHHhCCc---------cceeehHHHHHHHHHHhhccC-----------CCCeeeeeccccc
Confidence            33467777777766    56776653         468888888887666655433           6788888888886


Q ss_pred             hHHHH----HHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh
Q 037144          187 AFQKA----AQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF  262 (502)
Q Consensus       187 s~~~a----a~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~  262 (502)
                      ...+.    ....|+   ++..++..       |++.++++|+++++      +|.+-.++|++..+-||++|+++|+++
T Consensus       114 ~t~~~~~~~l~~~Gi---~~~~vd~~-------d~~~~~~~i~~~Tk------lv~~Esp~NP~l~v~Di~~i~~iA~~~  177 (397)
T d1y4ia1         114 CTHAFLSHSMPKFGI---NVRFVDAG-------KPEEIRAAMRPETK------VVYIETPANPTLSLVDIETVAGIAHQQ  177 (397)
T ss_dssp             HHHHHHHTHHHHTTC---EEEEECTT-------SHHHHHHHCCTTEE------EEEEESSCTTTCCCCCHHHHHHHHHHT
T ss_pred             ccchhhhcccCCCce---EeeccCCC-------CHHHHHHhcCCCCc------EEEecCCcccceeecccHHHHHHhhcC
Confidence            65443    445688   88888642       78999999977654      899999999999999999999999999


Q ss_pred             CCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhh-hcCCcccccCccCCCC
Q 037144          263 GIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLST-LSTNPQYLKNEATDQE  339 (502)
Q Consensus       263 g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~-~~~~~~yl~~~~~~~~  339 (502)
                      |++++||.+++...+.-| ...      +||.+.-+.-|++++...  .|.++.++. .+.+. +......+        
T Consensus       178 gi~~vvDnT~atP~~~~P-l~~------GaDivihS~TKyi~Ghsdvl~G~v~~~~~-~~~~~r~~~~~~~~--------  241 (397)
T d1y4ia1         178 GALLVVDNTFMSPYCQQP-LQL------GADIVVHSVTKYINGHGDVIGGIIVGKQE-FIDQARFVGLKDIT--------  241 (397)
T ss_dssp             TCEEEEECTTTCTTTCCG-GGG------TCSEEEEETTTTTTCSSCCCCEEEEECHH-HHHHHHHTHHHHTT--------
T ss_pred             CceEEecCcccCcccCcc-hhc------CCCEEEEehhhhcCCCcceeeeccCCCHH-HHHHHHHHHHHhCc--------
Confidence            999999999977665444 222      899999999999974422  455554443 32211 10000000        


Q ss_pred             CcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec-C-----C--------
Q 037144          340 PKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAF-P-----R--------  405 (502)
Q Consensus       340 ~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~-~-----~--------  405 (502)
                                     +-...+...|..++  |.+-+.-+++++.++|..+.+.|+++|.++-+. |     |        
T Consensus       242 ---------------G~~l~p~~a~l~~r--gl~TL~lRm~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~h~~~~~~  304 (397)
T d1y4ia1         242 ---------------GGCMSPFNAWLTLR--GVKTLGIRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQ  304 (397)
T ss_dssp             ---------------CCCCCHHHHHHHHH--HHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTCTTHHHHHHH
T ss_pred             ---------------CCcCCHHHHHHHHc--CcCcHHHHHHHHHHHHHHHHHHHHhCCCcCeEeCCCCCCCccccccccc
Confidence                           11225677888776  457788899999999999999999999987543 2     1        


Q ss_pred             ---CeeEEEEEeec
Q 037144          406 ---NFSLVCFRVTP  416 (502)
Q Consensus       406 ---~~~~v~f~~~~  416 (502)
                         ..++++|.+.+
T Consensus       305 ~~g~gg~~sf~~~~  318 (397)
T d1y4ia1         305 MSLPGGIISFEIAG  318 (397)
T ss_dssp             CSSCCSEEEEEETT
T ss_pred             cCCCCeEEEEEecC
Confidence               25688887753

>d1w23a_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Bacillus alcalophilus [TaxId: 1445]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Bacillus alcalophilus [TaxId: 1445]

Probab=99.66  E-value=4.9e-17  Score=160.66  Aligned_cols=339  Identities=12%  Similarity=-0.022  Sum_probs=180.3

Q ss_pred             ccccCCCCCCHHHHHHHHHHhhc-CCCC---cccc---cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchH
Q 037144           79 YFAYFPATSSVAGIVGEMLSSGF-NVVG---LDWI---SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCE  151 (502)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~l~~~~-n~~~---~~~~---~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~  151 (502)
                      -|+|.+++...|..+.+.+...+ |-+.   ....   -++.+.++-+++++.++++++.+++.      ..++++|+++
T Consensus         4 ~~nF~pGP~~~p~~V~~a~~~~~~~~~~~~~~~~~~sHRs~~~~~~~~~~r~~l~~l~~~~~~~------~i~~~~gt~~   77 (360)
T d1w23a_           4 VFNFNAGPSALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPNDY------QILFLQGGAS   77 (360)
T ss_dssp             CEECCSSSCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTE------EEEEESSHHH
T ss_pred             eeEeCCCCcCCCHHHHHHHHHHHHhhcccCccccccCcCCHHHHHHHHHHHHHHHHHhCCCCCC------EEEEeCCcHH
Confidence            45677776666666666665544 3211   1111   36788889999999999999998763      4677777766


Q ss_pred             HHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCch--hHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHh
Q 037144          152 ALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHC--AFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVE  229 (502)
Q Consensus       152 a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~--s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~  229 (502)
                      +++.+.......          ++.++++....|+  .+...+...+.   .++.+......  ..+++.++..+.    
T Consensus        78 ~~~~~~~~~~~~----------~~~~v~~~~~g~~~~~~~~~~~~~~~---~~~~~~~~~~~--~~~~~~~~~~~~----  138 (360)
T d1w23a_          78 LQFTMLPMNLLT----------KGTIGNYVLTGSWSEKALKEAKLLGE---THIAASTKANS--YQSIPDFSEFQL----  138 (360)
T ss_dssp             HHHHHHHHHHCC----------TTCEEEEEECSHHHHHHHHHHHTTSE---EEEEEECGGGT--SCSCCCGGGCCC----
T ss_pred             HHHHHHHhhhcc----------cCcccceeeccchhhhhHHHHHHhhh---cceeecccccc--ccchhhhhhccc----
Confidence            665444333221          3444444333433  24444555555   55555543322  223333322221    


Q ss_pred             cCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcc
Q 037144          230 AELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDC  309 (502)
Q Consensus       230 ~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~  309 (502)
                            .+..++.+|.+|.+.|+++|+++|+++|+.++|||+++.+..+.+-...      ++|+++++.||+  .|.+.
T Consensus       139 ------~~~~~~~~~~tg~~~~~~~i~~~~~~~g~l~ivDavqs~g~~~id~~~~------~vd~~~~~~~k~--~~~~~  204 (360)
T d1w23a_         139 ------NENDAYLHITSNNTIYGTQYQNFPEINHAPLIADMSSDILSRPLKVNQF------GMIYAGAQKNLG--PSGVT  204 (360)
T ss_dssp             ------CTTEEEEEEESEETTTTEECSSCCCCCSSCEEEECTTTTTSSCCCGGGC------SEEEEETTTTTS--CTTCE
T ss_pred             ------ccccceeEecCCccccceeeeeccccceeeEEeeccccccccccccccc------cceEEeeccccc--cCCcc
Confidence                  1223455678899999999999999999999999999888877654321      677777777765  44455


Q ss_pred             eEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCc--hHHHHHHHHh-cHHHHHHHHHHHHHHH
Q 037144          310 CCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRS--LKLWVVIRNF-GVANLRNFIRSHVGMA  386 (502)
Q Consensus       310 g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~a--l~~~~~l~~~-g~~g~~~~~~~~~~la  386 (502)
                      ++++.+.... . .......+.....           ..............  ......+..+ ...+.....++....+
T Consensus       205 ~~~~~~~~~~-~-~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (360)
T d1w23a_         205 VVIVKKDLLN-T-KVEQVPTMLQYAT-----------HIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKA  271 (360)
T ss_dssp             EEEEEHHHHC-S-CCTTCCGGGCHHH-----------HHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred             eeeEechhhh-c-ccccCCcchhhhh-----------hhhhhhhcccccceeeechhHHHHHHhhhhhhHHHHHHHHHHH
Confidence            6655433211 1 1011111110000           00000000011111  1111111111 1112223333333444


Q ss_pred             HHHHHHHhcCCCeEEec-CC--C-eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEE
Q 037144          387 KLFERLVTSDKRFEVAF-PR--N-FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVF  462 (502)
Q Consensus       387 ~~l~~~l~~~~~~~l~~-~~--~-~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~  462 (502)
                      ............+.... .+  + ..+++|.++.                            ......+.+.+.++|.+.
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~rS~~vvsf~i~~----------------------------~~~~~~~~~~l~~~GI~~  323 (360)
T d1w23a_         272 KIIYDTIDESNGFYVGHAEKGSRSLMNVTFNLRN----------------------------EELNQQFLAKAKEQGFVG  323 (360)
T ss_dssp             HHHHHHHHTTTTSSEESSCGGGBCSSEEEEECSS----------------------------HHHHHHHHHHHHHTTEES
T ss_pred             HHHHHHHhhcccccccCCChhhcceeEEEEEcCC----------------------------CccHHHHHHHHHHCCCee
Confidence            44444444433333332 22  2 3478888753                            223456777788888754


Q ss_pred             EEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144          463 MTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       463 ~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~  500 (502)
                      ..+.  +..+.+|+|+-| .++.|||++|++.|++.-+
T Consensus       324 ~~G~--~~~ggiRiS~~~-~~t~e~V~~Li~~~~~~~~  358 (360)
T d1w23a_         324 LNGH--RSVGGCRASIYN-AVPIDACIALRELMIQFKE  358 (360)
T ss_dssp             CBCC--TTTCSEEEECCT-TSCHHHHHHHHHHHHHHHH
T ss_pred             eeCC--CccCcEEEEeeC-CCCHHHHHHHHHHHHHHHh
Confidence            3321  111248999754 4567799999999998754

>d1dfoa_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Escherichia coli [TaxId: 562]

Probab=99.66  E-value=3.7e-15  Score=145.46  Aligned_cols=340  Identities=11%  Similarity=0.065  Sum_probs=213.5

Q ss_pred             cccCCCCCCHHHHHHHHHHhhc-CCCCcc------cccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHH
Q 037144           80 FAYFPATSSVAGIVGEMLSSGF-NVVGLD------WISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEA  152 (502)
Q Consensus        80 ~~~~~~~~~~~~~~~~~l~~~~-n~~~~~------~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a  152 (502)
                      +...++-..++..+.+++.+.+ |.+.-+      |....-..++|.-+++...++||+...        -+=..||+.|
T Consensus        29 i~LiaSEN~~S~~v~~a~~S~l~nkYaeG~pg~Ryy~G~~~iD~iE~la~~ra~~lF~a~~a--------nVqp~SGs~A  100 (416)
T d1dfoa_          29 IELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGADYA--------NVQPHSGSQA  100 (416)
T ss_dssp             EECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEE--------ECCCSSHHHH
T ss_pred             ceEecCcccCCHHHHHHhcCcccCcccCCCCCCcccCCChhHHHHHHHHHHHHHHHhCCCcc--------eeecccCccH
Confidence            3444444444455666666555 443332      233445689999999999999998532        2335678999


Q ss_pred             HHHHHHHHHHHHHHHhCccCCCCeEEEeCCC---CchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHh
Q 037144          153 LLCTLTAARDRVLKKIGRENISKLVVYSSDQ---THCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVE  229 (502)
Q Consensus       153 ~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~---~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~  229 (502)
                      |+.++.+..+           |++.|+.-+.   +|.+.-..+...|... +.+..+++.  ++.+|.+++++...+.+ 
T Consensus       101 N~av~~All~-----------pGD~Il~l~l~~GGHlshg~~~~~~g~~~-~~~~y~~d~--~~~IDyd~l~~~a~~~k-  165 (416)
T d1dfoa_         101 NFAVYTALLE-----------PGDTVLGMNLAHGGHLTHGSPVNFSGKLY-NIVPYGIDA--TGHIDYADLEKQAKEHK-  165 (416)
T ss_dssp             HHHHHHHHCC-----------TTCEEEEECTTTTCCGGGTCTTSHHHHHS-EEEEECBCS--SSSBCHHHHHHHHHHHC-
T ss_pred             HHHHHHHhcC-----------CCCeeeeccccccccccccccccccCceE-EEEecccCC--ccCccHHHHHHHHHHhc-
Confidence            9777666543           6777765443   4665544333333311 456666664  56899999999887653 


Q ss_pred             cCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcc
Q 037144          230 AELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDC  309 (502)
Q Consensus       230 ~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~  309 (502)
                          |.+|++-  .+.....-|++++.+||++.|+++++|+||-.+.+....+...   ++.+|++|.+.||+|.+|. +
T Consensus       166 ----PklIi~G--~S~y~r~~d~~~~reiad~vga~l~~D~aH~~GLIa~g~~~sP---~~~aDvvt~tThKtlrGPr-g  235 (416)
T d1dfoa_         166 ----PKMIIGG--FSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNP---VPHAHVVTTTTHKTLAGPR-G  235 (416)
T ss_dssp             ----CSEEEEE--CSSCCSCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCC---TTTSSEEEEESSSTTCCCS-C
T ss_pred             ----cceEEec--ccccccccCHHHHHHHHHhcCceEEcchhhhhcceeccccCCc---ccccceeeeehhhcccCCC-c
Confidence                6566653  4566677889999999999999999999997776654333322   3478999999999999985 6


Q ss_pred             eEEEeeCc-hhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCc-hHHHHHHHHhcHHHHHHHHHHHHHHHH
Q 037144          310 CCLWVKDP-SCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRS-LKLWVVIRNFGVANLRNFIRSHVGMAK  387 (502)
Q Consensus       310 g~~~~r~~-~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~a-l~~~~~l~~~g~~g~~~~~~~~~~la~  387 (502)
                      |++++++. +.+...+...   ++.                 +++++-.... .+...+++..-...+.+..++..++|+
T Consensus       236 giI~~~~~~~~~~~~i~~a---vfP-----------------g~qggp~~~~iaa~Aval~Ea~~~~fk~Y~~qvv~NA~  295 (416)
T d1dfoa_         236 GLILAKGGSEELYKKLNSA---VFP-----------------GGQGGPLMHVIAGKAVALKEAMEPEFKTYQQQVAKNAK  295 (416)
T ss_dssp             EEEEESSCCHHHHHHHHHH---HTT-----------------TTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHH
T ss_pred             eEEEeccchHhHHHHHHhh---hCc-----------------ccccCccHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence            77777643 2221111000   000                 1112212122 234455555455678899999999999


Q ss_pred             HHHHHHhcCCCeEEecC-CCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEee
Q 037144          388 LFERLVTSDKRFEVAFP-RNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHA  466 (502)
Q Consensus       388 ~l~~~l~~~~~~~l~~~-~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~  466 (502)
                      .|.+.|.+. ||+++.. .+..++.+.+.+.++.                           .+...+.|.+.|+..-.-+
T Consensus       296 ~La~~L~~~-G~~iv~ggTdnHlvlvdl~~~~~~---------------------------G~~a~~~Le~~gI~~Nkn~  347 (416)
T d1dfoa_         296 AMVEVFLER-GYKVVSGGTDNHLFLVDLVDKNLT---------------------------GKEADAALGRANITVNKNS  347 (416)
T ss_dssp             HHHHHHHHT-TCEEGGGSCSSSEEEEECGGGTCC---------------------------HHHHHHHHHHTTEECEECC
T ss_pred             HHHHHHHhC-CcccccCCCCCceeEEEecccCCC---------------------------HHHHHHHHHHcCeEEeCCc
Confidence            999999997 8999852 3456777776553321                           1233333444475432211


Q ss_pred             eEC------CEEEEEEEec---CCCCcHHHHHHHHHHHHHHHH
Q 037144          467 IVG------GIYVLRFAAG---NSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       467 ~~~------g~~~lR~~~~---~~~t~~~di~~~~~~l~~~~~  500 (502)
                      ...      ....||+...   ...-.++|++++.+.|.++.+
T Consensus       348 iP~d~~~~~~~SGiRiGT~a~TtrG~~e~d~~~iA~~I~~~l~  390 (416)
T d1dfoa_         348 VPNDPKSPFVTSGIRVGTPAITRRGFKEAEAKELAGWMCDVLD  390 (416)
T ss_dssp             CTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCceEeCCHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence            111      1346999863   233466899999888877654

>d1gc0a_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Pseudomonas putida [TaxId: 303]

Probab=99.66  E-value=3.5e-15  Score=146.72  Aligned_cols=222  Identities=13%  Similarity=0.117  Sum_probs=161.0

Q ss_pred             ccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhH
Q 037144          109 ISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAF  188 (502)
Q Consensus       109 ~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~  188 (502)
                      ...|....+|+.    ++++-|..         .++++++|..|+..++.+...           +++.|+++...|...
T Consensus        56 ~~nPT~~~LE~~----la~LEg~~---------~a~~~~SGmaAi~~~l~~l~~-----------~Gd~vl~~~~~Yg~t  111 (392)
T d1gc0a_          56 ISNPTLNLLEAR----MASLEGGE---------AGLALASGMGAITSTLWTLLR-----------PGDEVLLGNTLYGCT  111 (392)
T ss_dssp             -CCHHHHHHHHH----HHHHHTCS---------EEEEESSHHHHHHHHHHHHCC-----------TTCEEEEESSCCSHH
T ss_pred             CCChHHHHHHHH----HHHHhCCc---------ceeehhhHHHHHHHHHHhhcc-----------CCCeeecccccchhh
Confidence            466777777766    67776654         467888888887666655433           677888888888766


Q ss_pred             HHHHH----HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCC
Q 037144          189 QKAAQ----IVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGI  264 (502)
Q Consensus       189 ~~aa~----~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~  264 (502)
                      .+.++    .+|+   ++..++.       .|++.++++|+++++      +|.+..++|++..+.||++|+++|+++|+
T Consensus       112 ~~l~~~~~~~~Gi---~~~~~d~-------~d~~~~~~ai~~~t~------lv~~Esp~NP~l~v~Di~~i~~ia~~~g~  175 (392)
T d1gc0a_         112 FAFLHHGIGEFGV---KLRHVDM-------ADLQALEAAMTPATR------VIYFESPANPNMHMADIAGVAKIARKHGA  175 (392)
T ss_dssp             HHHHHHTGGGGTC---EEEEECT-------TCHHHHHHHCCTTEE------EEEEESSCTTTCCCCCHHHHHHHHGGGTC
T ss_pred             hhhhhhhhccCCc---ccccCCc-------cCHHHHHHhCCCCCe------EEEecccccceeeecchHHHHHHHHhcCC
Confidence            55543    4588   8888764       378999999987665      89999999999999999999999999999


Q ss_pred             EEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC--cceEEEeeCchhhhhhhcCCcccccCccCCCCCcc
Q 037144          265 WVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL--DCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKE  342 (502)
Q Consensus       265 ~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~--~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~  342 (502)
                      .++||.+++...+.-| ...      +||.+.-+..|++++..  -.|+++.++....+..+......+           
T Consensus       176 ~~vvDnT~atP~~~~P-l~~------GaDivihS~TKyi~Ghsd~~~G~v~~~~~~~~~~r~~~~~~~~-----------  237 (392)
T d1gc0a_         176 TVVVDNTYCTPYLQRP-LEL------GADLVVHSATKYLSGHGDITAGIVVGSQALVDRIRLQGLKDMT-----------  237 (392)
T ss_dssp             EEEEECTTTHHHHCCG-GGG------TCSEEEEETTTTTTCSSSCCCEEEEECHHHHHHHHHTHHHHHT-----------
T ss_pred             EEEEecCccCccccCh-HHh------CCCEEEEecceeecCCcccccccccchhHHHHHHHHHHHHHcc-----------
Confidence            9999999977766433 332      89999999999997542  245555544332111110000001           


Q ss_pred             cccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144          343 QEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA  402 (502)
Q Consensus       343 ~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~  402 (502)
                                  +-...+...|..++  |.+-+..++++..++|..+.+.|++.|.++-+
T Consensus       238 ------------G~~~~p~da~ll~r--gl~TL~lRm~~~~~nA~~lA~~L~~hp~V~~V  283 (392)
T d1gc0a_         238 ------------GAVLSPHDAALLMR--GIKTLNLRMDRHCANAQVLAEFLARQPQVELI  283 (392)
T ss_dssp             ------------CCCCCHHHHHHHHH--HHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEE
T ss_pred             ------------CCcCChhhHHHHHh--ccccHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence                        11124567777776  56888999999999999999999999988854

>d7aata_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chicken (Gallus gallus), mitochondria [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Chicken (Gallus gallus), mitochondria [TaxId: 9031]

Probab=99.65  E-value=3e-15  Score=150.12  Aligned_cols=332  Identities=11%  Similarity=0.017  Sum_probs=195.0

Q ss_pred             HHHHHHHHhhcCCC-CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCC-chHHHHHHHHHHHHHHHHHh
Q 037144           91 GIVGEMLSSGFNVV-GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGT-TCEALLCTLTAARDRVLKKI  168 (502)
Q Consensus        91 ~~~~~~l~~~~n~~-~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~g-gt~a~~~al~~a~~~~~~~~  168 (502)
                      ..+.+......+.. ...|....+..++.+++.+|+.+..+.....     ...+.+.+ ++.....++......++.  
T Consensus        49 ~~V~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~-----~~i~~~~~~~~~g~~~~~~~~~~~l~~--  121 (401)
T d7aata_          49 NCVRKAEAMIAAKKMDKEYLPIAGLADFTRASAELALGENSEAFKS-----GRYVTVQGISGTGSLRVGANFLQRFFK--  121 (401)
T ss_dssp             HHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHT-----TCEEEEEEEHHHHHHHHHHHHHHHHCT--
T ss_pred             HHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhccCCcccCc-----CceEEeccchHHHHHHHHHHhhHhhcC--
Confidence            44555555554333 3468888889999999999999887753221     12222222 122222233332222222  


Q ss_pred             CccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144          169 GRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA  248 (502)
Q Consensus       169 ~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~  248 (502)
                           +++.|+++++.+..+...++..|+   +++.+|+.+++++..|.+.+++.+....   .+..+++.+.++|+||.
T Consensus       122 -----pGd~Vlv~~P~y~~y~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~iii~~p~NPTG~  190 (401)
T d7aata_         122 -----FSRDVYLPKPSWGNHTPIFRDAGL---QLQAYRYYDPKTCSLDFTGAMEDISKIP---EKSIILLHACAHNPTGV  190 (401)
T ss_dssp             -----TCCEEEEEESCCTTHHHHHHHTTC---EEEEEECEETTTTEECHHHHHHHHTTSC---TTCEEEEESSSCTTTCC
T ss_pred             -----CCceEEEecCCCcchhhHHHHcCC---eEEEEeccccccccccHHHHHHHHhcCC---CceEEEEecCCCCCccc
Confidence                 788999999999999999999999   9999999766678899999988876432   23468888999999999


Q ss_pred             c---CChhHHHHHHHHhCCEEEeecccccccccCccchhh----hcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhh
Q 037144          249 V---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF----IDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCL  320 (502)
Q Consensus       249 i---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~----~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l  320 (502)
                      +   +.+++|+++|++|+++++.|.+|....+........    ......--.+..++.|.++ ....+|++....... 
T Consensus       191 ~~s~e~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~sk~~~~~G~RiG~~~~~~~~~-  269 (401)
T d7aata_         191 DPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAKNMGLYGERAGAFTVICRDA-  269 (401)
T ss_dssp             CCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSSH-
T ss_pred             cCCHHHHHHHHHHHhcceEEEEEeccchhhhcCCcccchhhhhhhhhhhcccceeEeccccceeeccccceeecchHHH-
Confidence            9   557899999999999999999998766532111110    0101011134456677665 446678877755421 


Q ss_pred             hhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--------cHHHHHHHHHHHHHHHHHHHHH
Q 037144          321 LSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--------GVANLRNFIRSHVGMAKLFERL  392 (502)
Q Consensus       321 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--------g~~g~~~~~~~~~~la~~l~~~  392 (502)
                      . ........+.....             ....+.   .++....+...+        ....++.+.+++.++++.+.+.
T Consensus       270 ~-~~~~~~~~~~~~~~-------------~~~~~~---~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~  332 (401)
T d7aata_         270 E-EAKRVESQLKILIR-------------PMYSNP---PMNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSN  332 (401)
T ss_dssp             H-HHHHHHHHHHHHHH-------------HHHSSC---CHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             H-HHHHHHHHHHHHhh-------------cccccc---chHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            1 00000000000000             000000   111111121111        1344566777788888999999


Q ss_pred             HhcCCC---eEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC
Q 037144          393 VTSDKR---FEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG  469 (502)
Q Consensus       393 l~~~~~---~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~  469 (502)
                      |++...   +..+ +++.++++|.  +..                          .    +++++|.++..+++.++   
T Consensus       333 L~~~~~~~~~~~~-~~~~G~F~~~--~ls--------------------------~----e~~~~L~~e~gV~~~pg---  376 (401)
T d7aata_         333 LKKEGSSHNWQHI-TDQIGMFCFT--GLK--------------------------P----EQVERLTKEFSIYMTKD---  376 (401)
T ss_dssp             HHHTTCCSCCHHH-HHCCSSEEEC--CCC--------------------------H----HHHHHHHHHHCEECCTT---
T ss_pred             HHHhCCCCCcceE-CCCCeEEEec--CCC--------------------------H----HHHHHHHHhCCEEECCC---
Confidence            988632   2222 3455666552  211                          1    22344433333444442   


Q ss_pred             CEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144          470 GIYVLRFAAGNSMTMESHVRAAWTVVQEHLE  500 (502)
Q Consensus       470 g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~  500 (502)
                          .||+++..  ++++|+++.++|.++.+
T Consensus       377 ----~Ris~a~~--~~~~i~~la~ai~~v~k  401 (401)
T d7aata_         377 ----GRISVAGV--ASSNVGYLAHAIHQVTK  401 (401)
T ss_dssp             ----CEEEGGGC--CTTTHHHHHHHHHHHHC
T ss_pred             ----cEEEeccC--CHHHHHHHHHHHHHHhC
Confidence                49998643  45589999999998764

>d2fnua1 c.67.1.4 (A:2-372) Spore coat polysaccharide biosynthesis protein C {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Spore coat polysaccharide biosynthesis protein C
species: Helicobacter pylori [TaxId: 210]

Probab=99.63  E-value=6.1e-15  Score=146.20  Aligned_cols=331  Identities=11%  Similarity=0.055  Sum_probs=206.9

Q ss_pred             HHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCC
Q 037144           94 GEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENI  173 (502)
Q Consensus        94 ~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~  173 (502)
                      .+.+...+...  .+..+|...++|++    +++++|...         ++++++||.|+..++.+....        ..
T Consensus        15 ~~~v~~~l~~~--~~~~G~~v~~fE~~----~~~~~g~k~---------ai~~~Sgt~Al~~al~al~~~--------~~   71 (371)
T d2fnua1          15 KKAVLEVLNSK--QLTQGKRSLLFEEA----LCEFLGVKH---------ALVFNSATSALLTLYRNFSEF--------SA   71 (371)
T ss_dssp             HHHHHHHHTSS--CCSSSHHHHHHHHH----HHHHHTCSE---------EEEESCHHHHHHHHHHHSSCC--------CT
T ss_pred             HHHHHHHHcCC--CccCCHHHHHHHHH----HHHHHCcCe---------EEEEecHHHHHHHHHHHhccc--------CC
Confidence            34455555443  35568888888876    677888763         688999999998887765321        11


Q ss_pred             CCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChh
Q 037144          174 SKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLK  253 (502)
Q Consensus       174 ~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~  253 (502)
                      ++++|+++..++.+...++...|.   .++.++++++  ..++.+++++++++.++      +|+++   ...|...+++
T Consensus        72 ~~~eVi~p~~t~~a~~~ai~~~G~---~pv~vDi~~~--~~~~~~~~~~~~~~~t~------avi~v---h~~G~~~~~~  137 (371)
T d2fnua1          72 DRNEIITTPISFVATANMLLESGY---TPVFAGIKND--GNIDELALEKLINERTK------AIVSV---DYAGKSVEVE  137 (371)
T ss_dssp             TSCEEEECSSSCTHHHHHHHHTTC---EEEECCBCTT--SSBCGGGSGGGCCTTEE------EEEEE---CGGGCCCCHH
T ss_pred             CCCeeecccccccccceeeeccCc---cccccccccc--ccccchhhhhhccchhh------ccccc---cccccccccc
Confidence            346899999999999999999999   9999999874  36777887777665443      56555   4789999999


Q ss_pred             HHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccC
Q 037144          254 PLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKN  333 (502)
Q Consensus       254 eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~  333 (502)
                      +|.++|+++|++++.|+|++-+.........   ....+.++++.+.|.+.+. +.|++++.++................
T Consensus       138 ~i~~~~~~~~i~lIEDaaqa~Ga~~~~~~~G---~~g~~~~~Sf~~~K~l~~g-~GG~i~t~~~~~~~~~~~~~~~g~~~  213 (371)
T d2fnua1         138 SVQKLCKKHSLSFLSDSSHALGSEYQNKKVG---GFALASVFSFHAIKPITTA-EGGAVVTNDSELHEKMKLFRSHGMLK  213 (371)
T ss_dssp             HHHHHHHHHTCEEEEECTTCTTCEETTEETT---SSSSEEEEECCTTSSSCCS-SCEEEEESCHHHHHHHHHHTBTTEEE
T ss_pred             cccccccccchhhccchhhccCceeccccCC---ccccccccccccccccccc-cceEEEeechhhhhhccccccccccc
Confidence            9999999999999999999877654322211   1234567788889998764 46777777765543322111100000


Q ss_pred             ccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-----Cee
Q 037144          334 EATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR-----NFS  408 (502)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~-----~~~  408 (502)
                      .. .     ...+.  ..+...-|..-+.+...+.  ..+.+.+.+++..++++++.+.|.+.+++.++.+.     ...
T Consensus       214 ~~-~-----~~~~~--~~~G~n~r~sel~Aaigl~--qL~~l~~~~~~R~~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~  283 (371)
T d2fnua1         214 KD-F-----FEGEV--KSIGHNFRLNEIQSALGLS--QLKKAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNH  283 (371)
T ss_dssp             SS-S-----SCEEE--SSCCCBCCCCHHHHHHHHH--HHTTHHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCS
T ss_pred             cc-c-----ccccc--ccccccccccchhhhhhhh--hhhhccchhhhhhhhhhhhcccccccccccccccccccccccc
Confidence            00 0     00000  0111122333333333333  33667888889999999999999999888876432     112


Q ss_pred             EEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEE---Eeee----E-----CC------
Q 037144          409 LVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFM---THAI----V-----GG------  470 (502)
Q Consensus       409 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~---~~~~----~-----~g------  470 (502)
                      .+.+.+....                          .....++.+.|.++|+-.-   .+..    +     .+      
T Consensus       284 ~~~i~~~~~~--------------------------~~~r~~~~~~L~~~gI~~~~~y~pl~~~~~~~~~~~~~~~pnae  337 (371)
T d2fnua1         284 LYPILMHQKF--------------------------FTCKKLILESLHKRGILAQVHYKPIYQYQLYQQLFNTAPLKSAE  337 (371)
T ss_dssp             CEEEEECGGG--------------------------GGGHHHHHHHHHHTTEECBCCCCCGGGSHHHHHHHCCCCCHHHH
T ss_pred             cccccccccc--------------------------hhHHHHHHHHHHHCCCCcceeCcccccCHHHHhccccCCCHHHH
Confidence            2333332210                          0012356677777775211   0100    0     01      


Q ss_pred             ---EEEEEEEecCCCCcHHHHHHHHHHHHHHHHhC
Q 037144          471 ---IYVLRFAAGNSMTMESHVRAAWTVVQEHLEAF  502 (502)
Q Consensus       471 ---~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~~  502 (502)
                         ...|.+= +++..+++||++.++.|.+..+.|
T Consensus       338 ~~~~~~l~LP-~~~~lt~~di~~I~~~i~~~~~~~  371 (371)
T d2fnua1         338 DFYHAEISLP-CHANLNLESVQNIAHSVLKTFESF  371 (371)
T ss_dssp             HHHHHEEEEC-CCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhCeEECc-CCCCCCHHHHHHHHHHHHHHHHcC
Confidence               1245543 466778889999999999987753

>d1rv3a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.63  E-value=5.6e-14  Score=139.12  Aligned_cols=351  Identities=12%  Similarity=0.070  Sum_probs=212.6

Q ss_pred             ccccCCCCCCHHHHHHHHHHhhc-CCCCcc------cccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEE-cCCch
Q 037144           79 YFAYFPATSSVAGIVGEMLSSGF-NVVGLD------WISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVI-QGTTC  150 (502)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~l~~~~-n~~~~~------~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~-t~ggt  150 (502)
                      .+...++-...+..+.+++.+.+ |.+.-+      |....-..++|..+++...++||++....     ..-+ ..||+
T Consensus        33 ~l~LIaSEN~~S~~v~~algS~l~nkYaeG~pg~Ryy~G~~~iD~iE~la~~ra~~lF~~~~~~~-----~anVqp~SGs  107 (470)
T d1rv3a_          33 GLELIASENFASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCW-----GVNVQPYSGS  107 (470)
T ss_dssp             SEECCTTCCCCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTCCTTTE-----EEECCCSSHH
T ss_pred             CceEecCCCcCCHHHHHHhcchhcccccCCCCCccccCCchhHHHHHHHHHHHHHHHhCCChhhc-----cccccccCCc
Confidence            34555555555555666666655 444333      33445678999999999999999974320     2233 45889


Q ss_pred             HHHHHHHHHHHHHHHHHhCccCCCCeEEEe---CCCCchhHHH-------HHHHcCCCCCCEEEEecCCCCCcccCHHHH
Q 037144          151 EALLCTLTAARDRVLKKIGRENISKLVVYS---SDQTHCAFQK-------AAQIVGIDRKNIRAIKTTKSSSYGLSAESV  220 (502)
Q Consensus       151 ~a~~~al~~a~~~~~~~~~~~~~~~~~v~~---s~~~H~s~~~-------aa~~~Glg~~~v~~v~~~~~~~~~~d~~~L  220 (502)
                      .||+.+..+..+           |++.|+.   +.-+|.|.-.       .+.-...   +.+..+++++ ++.+|.+++
T Consensus       108 ~An~av~~all~-----------pgD~im~~~l~~GGHlshg~~~~~~~~~~~~~~~---~~~~y~v~~~-~~~IDyd~l  172 (470)
T d1rv3a_         108 PANFAVYTALVE-----------PHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFF---ESMAYKVNPD-TGYIDYDRL  172 (470)
T ss_dssp             HHHHHHHHHHTC-----------TTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHS---EEEEECBCTT-TCSBCHHHH
T ss_pred             cHHHHHHHHhcC-----------CCCeEeeeccccCCcccccccccCCCccccccee---EeeEEEEecc-cCcccHHHH
Confidence            999777665543           6666665   3335665421       1112234   6778888864 579999999


Q ss_pred             HHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccC
Q 037144          221 LSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPH  300 (502)
Q Consensus       221 e~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~h  300 (502)
                      ++...+.+     |.+|++  |.+..-..-|++++.+||++.|++|++|+||-++.+....+...+   +.+|++|.+.|
T Consensus       173 ~~~a~~~k-----PklIi~--G~S~y~r~~d~~~~reIad~vga~l~~D~aH~aGLIA~g~~~sPl---~~aDvvt~tTH  242 (470)
T d1rv3a_         173 EENARLFH-----PKLIIA--GTSCYSRNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPF---EHCHVVTTTTH  242 (470)
T ss_dssp             HHHHHHHC-----CSEEEE--CCSSCCSCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGG---GTCSEEEEESS
T ss_pred             HHHHHhhC-----cceEee--chhhccccCCHHHHHHHHhccCCeEEecchhhhhhccccccCChh---heeeeeeeehh
Confidence            99887643     656655  344555567999999999999999999999977765443333333   37899999999


Q ss_pred             CcCCCCCcceEEEeeCchhhhh-hhcCC--cccccCccCCCCCcccccCCCc-ccccCCCCCCc-hHHHHHHHHhcHHHH
Q 037144          301 KWLFTTLDCCCLWVKDPSCLLS-TLSTN--PQYLKNEATDQEPKEQEVGYKD-WQITLCRRFRS-LKLWVVIRNFGVANL  375 (502)
Q Consensus       301 K~l~~p~~~g~~~~r~~~~l~~-~~~~~--~~yl~~~~~~~~~~~~~~~~~~-~~~~~sr~~~a-l~~~~~l~~~g~~g~  375 (502)
                      |+|.+|. +|++++++...-.+ .....  ..|-.           .++..- -+++++-.... .++..+++.....-+
T Consensus       243 KtlrGPr-gGiI~~~~~~~~~~~~~~~~~~~~~~~-----------~i~~avFPg~qggph~~~IAa~Ava~~ea~~~~f  310 (470)
T d1rv3a_         243 KTLRGCR-AGMIFYRRGVRSVDPKTGKEILYNLES-----------LINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEF  310 (470)
T ss_dssp             GGGCCCS-CEEEEEECSBCC-------CCBCCHHH-----------HHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHH
T ss_pred             hhccCCc-ceEEEEccccccccccccchhHHHHHH-----------HHhhhcCccccccchhhHHHHHHHHHHHhcChHH
Confidence            9999996 57777775411000 00000  00000           000000 01222222222 344445555445567


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCeEEecC-CCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHH
Q 037144          376 RNFIRSHVGMAKLFERLVTSDKRFEVAFP-RNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLES  454 (502)
Q Consensus       376 ~~~~~~~~~la~~l~~~l~~~~~~~l~~~-~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  454 (502)
                      .+..++..++|+.|.+.|.+. |+.++.. ....++.+.+.+.++.                        .   .+..+.
T Consensus       311 k~Ya~qvv~NAk~La~~L~~~-G~~v~~ggTdnHlvlvdl~~~g~~------------------------g---~~ae~~  362 (470)
T d1rv3a_         311 KEYQRQVVANCRALSAALVEL-GYKIVTGGSDNHLILVDLRSKGTD------------------------G---GRAEKV  362 (470)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEEGGGGTCC------------------------H---HHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhC-CceeccCCCCCceEEEeecccCCc------------------------H---HHHHHH
Confidence            899999999999999999997 8999742 3445666666543321                        1   122223


Q ss_pred             HHhcCcEEEEeeeEC-----CEEEEEEEec---CCCCcHHHHHHHHHHHHHHH
Q 037144          455 INVSGKVFMTHAIVG-----GIYVLRFAAG---NSMTMESHVRAAWTVVQEHL  499 (502)
Q Consensus       455 l~~~g~~~~~~~~~~-----g~~~lR~~~~---~~~t~~~di~~~~~~l~~~~  499 (502)
                      |.+-|+..-.-+...     ....||+...   ...-.++|+.++.+.|.++.
T Consensus       363 Le~~gI~~Nkn~iP~D~~~~~~sGiRiGT~alTtrG~~e~dm~~iA~~I~~~l  415 (470)
T d1rv3a_         363 LEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGI  415 (470)
T ss_dssp             HHHTTEECEEECCSSCSCTTSCCEEEEECHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred             HHHcCcEECCCcCCCCCCCCCCCeeEecCHHHHhCCCCHHHHHHHHHHHHHHH
Confidence            333465322111111     1246999863   33456788888888887655

>d2a7va1 c.67.1.4 (A:26-488) Serine hydroxymethyltransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=99.60  E-value=1.1e-13  Score=136.55  Aligned_cols=351  Identities=13%  Similarity=0.064  Sum_probs=197.7

Q ss_pred             ccccCCCCCCHHHHHHHHHHhhc-CCCCccc------ccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcE--EEcCCc
Q 037144           79 YFAYFPATSSVAGIVGEMLSSGF-NVVGLDW------ISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGG--VIQGTT  149 (502)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~l~~~~-n~~~~~~------~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g--~~t~gg  149 (502)
                      .+...++-...+..+.+.+.+.+ |.+.-+|      ....-..++|..+++...++||++...      ++  +=..||
T Consensus        29 ~l~LiaSEN~~S~~v~~algS~l~nkYaeG~pg~Ryy~G~~~iD~iE~la~~ra~~lF~~~~a~------w~vNVqp~SG  102 (463)
T d2a7va1          29 GLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQ------WGVNVQPYSG  102 (463)
T ss_dssp             SEECCTTCCCCCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHHHTTCCTTT------EEEECCCSSH
T ss_pred             CeeEeccCCcCCHHHHHHhcchhcccccCCCCCccccCCchhHHHHHHHHHHHHHHHhCCCchh------ccCCcccccc
Confidence            34455555555555666666555 4443333      233356899999999999999998542      22  234578


Q ss_pred             hHHHHHHHHHHHHHHHHHhCccCCCCeEEEe---CCCCchhHHH-----HHHHcCCCCCCEEEEecCCCCCcccCHHHHH
Q 037144          150 CEALLCTLTAARDRVLKKIGRENISKLVVYS---SDQTHCAFQK-----AAQIVGIDRKNIRAIKTTKSSSYGLSAESVL  221 (502)
Q Consensus       150 t~a~~~al~~a~~~~~~~~~~~~~~~~~v~~---s~~~H~s~~~-----aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le  221 (502)
                      +.||+.+..+..+           |++.|+.   +.-.|.|.-.     -....|.-. +...+++++ .++.+|.++++
T Consensus       103 s~An~av~~all~-----------pgD~Im~l~l~~GGHlshg~~~~~~~~~~~g~~~-~~~~Y~~d~-~~~~IDyd~~~  169 (463)
T d2a7va1         103 SPANLAVYTALLQ-----------PHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFF-ESMPYKLNP-KTGLIDYNQLA  169 (463)
T ss_dssp             HHHHHHHHHHHCC-----------SCEECCC--------------------------------CCBCT-TTCSBCHHHHH
T ss_pred             HHHHHHHHHHHcC-----------CCceEEeeccCcCcccccccccccccccceeeEe-eeeeeeccC-CCCcCcHHHHH
Confidence            8999766655543           6666653   3334665442     223334311 344445554 35799999999


Q ss_pred             HHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCC
Q 037144          222 SQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHK  301 (502)
Q Consensus       222 ~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK  301 (502)
                      +...+.+     |.+|++  |.+..-..-|++++.+||++.|++|++|+||-++.+....+...+   +.+|++|.+.||
T Consensus       170 ~~a~~~k-----PklIi~--G~S~y~r~~d~~~~reIad~vga~l~~D~aH~aGLIA~g~~~sP~---~~aDvvt~tTHK  239 (463)
T d2a7va1         170 LTARLFR-----PRLIIA--GTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPF---KHADIVTTTTHK  239 (463)
T ss_dssp             HHHHHHC-----CSEEEE--CCSSCCSCCCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGG---GTCSEEEEESSG
T ss_pred             HHHhhcC-----CceEEe--cccccccccCHHHHHHHhhcccceEEechhhhhHHhhhhhhcChh---hhhhhhhchhhh
Confidence            9987753     666655  344455567999999999999999999999977766544333333   379999999999


Q ss_pred             cCCCCCcceEEEeeCchhhhhh-hcC--CcccccCccCCCCCcccccCC-CcccccCCCCCCc-hHHHHHHHHhcHHHHH
Q 037144          302 WLFTTLDCCCLWVKDPSCLLST-LST--NPQYLKNEATDQEPKEQEVGY-KDWQITLCRRFRS-LKLWVVIRNFGVANLR  376 (502)
Q Consensus       302 ~l~~p~~~g~~~~r~~~~l~~~-~~~--~~~yl~~~~~~~~~~~~~~~~-~~~~~~~sr~~~a-l~~~~~l~~~g~~g~~  376 (502)
                      +|.+|. +|++++++...-... -..  ...|-.           .++. .-.+++++-.... .+...+++..-...++
T Consensus       240 TlrGPr-gGiIl~~~~~~~~~~~~~~~~~~~~~~-----------~i~~avFPg~qggph~h~iAa~Ava~~ea~~~~fk  307 (463)
T d2a7va1         240 TLRGAR-SGLIFYRKGVKAVDPKTGREIPYTFED-----------RINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFR  307 (463)
T ss_dssp             GGCSCS-CEEEEEECSEEEEETTTEEEEECCCHH-----------HHHHHHTTTTCCSCCHHHHHHHHHHHHHHHSHHHH
T ss_pred             hhcCCC-ceEEEEcccccccccccCccchhHHHH-----------HhhhhcCcccchhhhhhhHHHHHHHHHHhcCchHH
Confidence            999996 677777763110000 000  000000           0000 0001222222222 2334455544455688


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCeEEecC-CCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHH
Q 037144          377 NFIRSHVGMAKLFERLVTSDKRFEVAFP-RNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESI  455 (502)
Q Consensus       377 ~~~~~~~~la~~l~~~l~~~~~~~l~~~-~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l  455 (502)
                      +..++..++|+.|.+.|.+. |+.++.. .+..++.+.+.+.+..                        .   ....+.|
T Consensus       308 ~Ya~qVv~NAk~La~~L~~~-G~~vv~ggTdnHlvlvdl~~~~~~------------------------G---~~ae~~L  359 (463)
T d2a7va1         308 EYSLQVLKNARAMADALLER-GYSLVSGGTDNHLVLVDLRPKGLD------------------------G---ARAERVL  359 (463)
T ss_dssp             HHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECTTTTCC------------------------H---HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhC-CCeeecCCCCCceeeeeccccCCC------------------------H---HHHHHHH
Confidence            99999999999999999987 8999853 3455677766554321                        1   2223333


Q ss_pred             HhcCcEEEEeeeE-C-----CEEEEEEEecC---CCCcHHHHHHHHHHHHHHH
Q 037144          456 NVSGKVFMTHAIV-G-----GIYVLRFAAGN---SMTMESHVRAAWTVVQEHL  499 (502)
Q Consensus       456 ~~~g~~~~~~~~~-~-----g~~~lR~~~~~---~~t~~~di~~~~~~l~~~~  499 (502)
                      .+.|+. +.--.+ .     ....||+....   ..-.++|+.++.+.|.++.
T Consensus       360 e~~gI~-~Nkn~iP~D~~~~~~sGiRiGT~a~TtrG~~e~dm~~iA~~I~~~l  411 (463)
T d2a7va1         360 ELVSIT-ANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGV  411 (463)
T ss_dssp             HHTTEE-CEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred             HhccCc-cCCccCCCCCCCCCCCceEeCCHHHHhCCCCHHHHHHHHHHHHHHH
Confidence            344643 222111 1     12358998632   2245678888888877654

>d1ajsa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig (Sus scrofa), cytosolic form [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Pig (Sus scrofa), cytosolic form [TaxId: 9823]

Probab=99.60  E-value=3.8e-14  Score=142.45  Aligned_cols=324  Identities=13%  Similarity=0.032  Sum_probs=190.2

Q ss_pred             cccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCc
Q 037144          106 LDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTH  185 (502)
Q Consensus       106 ~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H  185 (502)
                      ..|....+..++.+++.+|+.+..+.+-..   +....+.|++++.++..+....... +.   .-..+++.|++++..+
T Consensus        68 ~~Y~p~~G~p~lreaia~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~-~~---~~~~pGd~Vlv~~P~y  140 (412)
T d1ajsa_          68 HEYLPILGLAEFRTCASRLALGDDSPALQE---KRVGGVQSLGGTGALRIGAEFLARW-YN---GTNNKDTPVYVSSPTW  140 (412)
T ss_dssp             CCCCCTTCCHHHHHHHHHHHHCTTCHHHHT---TCEEEEEEEHHHHHHHHHHHHHHHH-SS---SSSCCCSCEEEEESCC
T ss_pred             CCCCCCCCCHHHHHHHHHHHhccCCccccc---ccceeecccchhhHHHHHHHHHHHH-hh---hcCCCCCEEEEeCCcc
Confidence            458777888999999999998877653111   0013556677776665554433221 10   0112788899999999


Q ss_pred             hhHHHHHHHcCCCCCCEEEEe-cCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc---CChhHHHHHHHH
Q 037144          186 CAFQKAAQIVGIDRKNIRAIK-TTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV---DPLKPLCDVAKQ  261 (502)
Q Consensus       186 ~s~~~aa~~~Glg~~~v~~v~-~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i---dpl~eI~~i~~~  261 (502)
                      ..+...++..|+   +.+.++ ..+++.+..|.+.+++.+....   .+..+++.+.++|+||.+   +.+++|+++|++
T Consensus       141 ~~y~~~~~~~G~---~~v~~~~~~~~~~~~~d~~~~~~~~~~~~---~~~~~il~~~P~NPTG~v~s~e~~~~i~~la~~  214 (412)
T d1ajsa_         141 ENHNGVFTTAGF---KDIRSYRYWDTEKRGLDLQGFLSDLENAP---EFSIFVLHACAHNPTGTDPTPEQWKQIASVMKR  214 (412)
T ss_dssp             THHHHHHHHTTC---SCEEEEECEETTTTEECHHHHHHHHHHSC---TTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred             hhhHHHHHHcCC---eEEEeecccccccccccHHHHHHHHHhcc---CCcEEEEecCCCCCcCCCCCHHHHHHHHHHHhh
Confidence            999999999998   766554 3333456789988888776533   234678888999999999   458899999999


Q ss_pred             hCCEEEeecccccccccCccchh----hhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCcccccCccC
Q 037144          262 FGIWVHVDAAYAGSACICPEFRH----FIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQYLKNEAT  336 (502)
Q Consensus       262 ~g~~lhVDaA~g~~~~~~~~~~~----~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~  336 (502)
                      ||++++.|.+|....+.......    .......-..+..++.|.++.| ..+|++++....... .... ..++.....
T Consensus       215 ~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~sk~~~~~G~R~G~~~~~~~~~~~-~~~~-~~~~~~~~~  292 (412)
T d1ajsa_         215 RFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDS-ILRV-LSQMQKIVR  292 (412)
T ss_dssp             HTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCEEEEEEECSSHHH-HHHH-HHHHHHHHH
T ss_pred             CCEEEEecHhhhhhhcCCcccchhhhhhhhhhcccccccccccccccCCCCCccccccchhHHHH-HHHH-HHHHHHHhh
Confidence            99999999999776543221110    0111112335556667776544 567887776542210 0000 000000000


Q ss_pred             CCCCcccccCCCcccccCCCCCCchHHHHHHHHh--------cHHHHHHHHHHHHHHHHHHHHHHhcCCC---eEEecCC
Q 037144          337 DQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--------GVANLRNFIRSHVGMAKLFERLVTSDKR---FEVAFPR  405 (502)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--------g~~g~~~~~~~~~~la~~l~~~l~~~~~---~~l~~~~  405 (502)
                      .             +..+.   ..+....+...+        ..+.+..+.+++.++++.+.+.|++...   |..+ ++
T Consensus       293 ~-------------~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~l~~~L~~~~~~~~~~~i-~~  355 (412)
T d1ajsa_         293 V-------------TWSNP---PAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTPGTWNHI-TD  355 (412)
T ss_dssp             T-------------TTSSC---CSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHH-HH
T ss_pred             c-------------ccccc---chHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeeee-cC
Confidence            0             00001   112222221111        2334566677788888889999988631   2222 23


Q ss_pred             CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcH
Q 037144          406 NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTME  485 (502)
Q Consensus       406 ~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~  485 (502)
                      +.++++|  .+..                              .+.+++|.++..+++.++       .|++++.  .++
T Consensus       356 ~~G~F~~--~~ls------------------------------~~~v~~L~~e~gV~~vpg-------~Ri~~ag--~~~  394 (412)
T d1ajsa_         356 QIGMFSF--TGLN------------------------------PKQVEYLINQKHIYLLPS-------GRINMCG--LTT  394 (412)
T ss_dssp             CCSSEEE--CCCC------------------------------HHHHHHHHHTTCEECCTT-------SEEEGGG--CCT
T ss_pred             CCeEEEe--cCCC------------------------------HHHHHHHHHhCCEEEeCC-------CeEEecc--CCH
Confidence            3445544  2211                              122344544444454442       1999864  345


Q ss_pred             HHHHHHHHHHHHHHHhC
Q 037144          486 SHVRAAWTVVQEHLEAF  502 (502)
Q Consensus       486 ~di~~~~~~l~~~~~~~  502 (502)
                      ++|+++.++|.++.+++
T Consensus       395 ~~i~~~a~aI~~av~~~  411 (412)
T d1ajsa_         395 KNLDYVATSIHEAVTKI  411 (412)
T ss_dssp             TTHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHhc
Confidence            68999999999988764

>d1cs1a_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-synthase, CGS
species: Escherichia coli [TaxId: 562]

Probab=99.60  E-value=1.3e-13  Score=135.15  Aligned_cols=223  Identities=12%  Similarity=0.133  Sum_probs=159.7

Q ss_pred             cccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh
Q 037144          108 WISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA  187 (502)
Q Consensus       108 ~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s  187 (502)
                      -...|....+|+.    |+++-|.+         .++.++||..|+..++.+...           +++.|+++...+..
T Consensus        46 R~~nPt~~~le~~----la~LEgg~---------~a~~~sSGMaAi~~~l~~l~~-----------~gd~vv~~~~~yg~  101 (384)
T d1cs1a_          46 RRGNPTRDVVQRA----LAELEGGA---------GAVLTNTGMSAIHLVTTVFLK-----------PGDLLVAPHDCYGG  101 (384)
T ss_dssp             TTCCHHHHHHHHH----HHHHHTCS---------EEEEESSHHHHHHHHHHHHCC-----------TTCEEEEETTCCHH
T ss_pred             CCCCHHHHHHHHH----HHHHhCCC---------ceEEecChHHHHHHHHhhccc-----------ccceecccccccch
Confidence            3467877888876    56776643         468888888887666655433           67888888877765


Q ss_pred             HHHHH----HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhC
Q 037144          188 FQKAA----QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFG  263 (502)
Q Consensus       188 ~~~aa----~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g  263 (502)
                      ..+..    ...|+   .+..+.       ..|.+.+++++.++++      +|.+-.++|++..+-||++|+++|+++|
T Consensus       102 t~~~~~~~~~~~g~---~~~~~d-------~~d~~~~~~~~~~~t~------~v~~EspsNP~l~v~Di~~i~~ia~~~g  165 (384)
T d1cs1a_         102 SYRLFDSLAKRGCY---RVLFVD-------QGDEQALRAALAEKPK------LVLVESPSNPLLRVVDIAKICHLAREVG  165 (384)
T ss_dssp             HHHHHHHHHTTTSC---EEEEEC-------TTCHHHHHHHHHTCCS------EEEEECSCTTTCCCCCHHHHHHHHHHTT
T ss_pred             hhhhhhhhhccccc---cccccc-------CCCHHHHHhhcccccc------EEEEeccccccceeccHHHHhhhhhhcC
Confidence            54433    23355   555554       2378999999987765      8999999999999999999999999999


Q ss_pred             CEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCc
Q 037144          264 IWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPK  341 (502)
Q Consensus       264 ~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~  341 (502)
                      +.++||.+++...+.-| ...      +||.+.-+..|++++-..  .|+++.+++..... +......+          
T Consensus       166 ~~~vVDNT~atP~~~~P-l~~------GaDiVvhS~TKyi~Ghsdv~~G~vv~~~~~~~~~-~~~~~~~~----------  227 (384)
T d1cs1a_         166 AVSVVDNTFLSPALQNP-LAL------GADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTE-LAWWANNI----------  227 (384)
T ss_dssp             CEEEEECTTTCTTTCCG-GGG------TCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHH-HHHHHHHH----------
T ss_pred             cEEEEeccccCcccccc-ccc------CCCEEEEccccccccCCCcccccccCCchhhhhh-hhhhhhhh----------
Confidence            99999999977655433 222      899999999999975433  45566655543221 10000001          


Q ss_pred             ccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q 037144          342 EQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAF  403 (502)
Q Consensus       342 ~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~  403 (502)
                                   +-...+...|+.++  |.+-+.-+++++.++|..+.+.|+++|.++-+.
T Consensus       228 -------------G~~~~p~~a~ll~r--gL~TL~lRm~~~~~nA~~lA~~L~~hp~V~~V~  274 (384)
T d1cs1a_         228 -------------GVTGGAFDSYLLLR--GLRTLVPRMELAQRNAQAIVKYLQTQPLVKKLY  274 (384)
T ss_dssp             -------------TCBCCHHHHHHHHH--HHTTHHHHHHHHHHHHHHHHHHHTTCTTEEEEE
T ss_pred             -------------hhccccccHHHHhh--ccchhHHHHHHHHHHHHHHHHhcccCCceeeee
Confidence                         11124567787776  567789999999999999999999999987553

>d2q7wa1 c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Escherichia coli [TaxId: 562]

Probab=99.59  E-value=9.7e-15  Score=146.03  Aligned_cols=329  Identities=11%  Similarity=0.010  Sum_probs=193.2

Q ss_pred             HHHHHHHhhcC-CCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCc
Q 037144           92 IVGEMLSSGFN-VVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGR  170 (502)
Q Consensus        92 ~~~~~l~~~~n-~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~  170 (502)
                      .+.+.+....+ .....|....+..++.+.+.+|+.+..+.....   .....+.+.+++.+...++......       
T Consensus        48 ~V~~A~~~~~~~~~~~~Y~p~~G~~~lR~aia~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~l~~~-------  117 (396)
T d2q7wa1          48 SVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALIND---KRARTAQTPGGTGALRVAADFLAKN-------  117 (396)
T ss_dssp             HHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHT---TCEEEEEESHHHHHHHHHHHHHHHH-------
T ss_pred             HHHHHHHHHhhCCCCCCCCCCcCCHHHHHHHHHHHHhhcCCcccc---cceeeeccchHHHHHHHHHHHHhhc-------
Confidence            34455444443 334468888889999999999998887752110   0012345555554443333322211       


Q ss_pred             cCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc-
Q 037144          171 ENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV-  249 (502)
Q Consensus       171 ~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i-  249 (502)
                        .+++.|++++..+..+...++..|+   +++.+|...++++..+...+++.+...   ..+..+++.+.++|+||.+ 
T Consensus       118 --~~gd~Vlvp~P~y~~y~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~i~~~~P~NPTG~~~  189 (396)
T d2q7wa1         118 --TSVKRVWVSNPSWPNHKSVFNSAGL---EVREYAYYDAENHTLDFDALINSLNEA---QAGDVVLFHGCCHNPTGIDP  189 (396)
T ss_dssp             --SCCCEEEEEESCCTHHHHHHHHTTC---EEEEEECEETTTTEECHHHHHHHHTTC---CTTCEEEEECSSCTTTCCCC
T ss_pred             --ccceEEEEecCCCccchHHHHHcCC---eeEecccccccccccccchHHHHHHHh---ccCcEEEEecCCcCCcCeec
Confidence              1678899999999999999999999   999999976666677888877766443   2335688888999999998 


Q ss_pred             --CChhHHHHHHHHhCCEEEeecccccccccCccchhh---hcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhh
Q 037144          250 --DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF---IDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLST  323 (502)
Q Consensus       250 --dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~---~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~  323 (502)
                        +.+++|+++|++|+++++.|.+|.......+.....   ......-..+..++.|.++ ....+|++.......- ..
T Consensus       190 s~e~~~~l~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~sk~~~~~G~R~G~~~~~~~~~~-~~  268 (396)
T d2q7wa1         190 TLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGACTLVAADSE-TV  268 (396)
T ss_dssp             CHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTCGGGCCEEEEEECSSHH-HH
T ss_pred             CHHHHHHHHHHHhcCCeEEEEeccccccccCCccCchHhhhhhhhcccccccccccccccccCCCccccccchhHHH-HH
Confidence              457789999999999999999998765432211111   1111123355566778775 4466788877654221 10


Q ss_pred             hcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--------cHHHHHHHHHHHHHHHHHHHHHHhc
Q 037144          324 LSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--------GVANLRNFIRSHVGMAKLFERLVTS  395 (502)
Q Consensus       324 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--------g~~g~~~~~~~~~~la~~l~~~l~~  395 (502)
                      .... ..+......             ...++   .....+++...+        ..+.+.++.+++.++++.+.+.|++
T Consensus       269 ~~~~-~~~~~~~~~-------------~~~~~---~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~  331 (396)
T d2q7wa1         269 DRAF-SQMKAAIRA-------------NYSNP---PAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQE  331 (396)
T ss_dssp             HHHH-HHHHHHHHT-------------TTSSC---CHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHH
T ss_pred             HHhh-hhhhhhhhc-------------cccCC---CHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            0000 000000000             00000   122222222222        2345666777788889999999988


Q ss_pred             CCC---eEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEE
Q 037144          396 DKR---FEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIY  472 (502)
Q Consensus       396 ~~~---~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~  472 (502)
                      +..   +..+ ++..++++|.  +..                          .    +..++|.++..+++.++   +  
T Consensus       332 ~~~~~~~~~~-~~~~G~F~~~--~l~--------------------------~----e~~~~L~~e~gV~~~~g---~--  373 (396)
T d2q7wa1         332 KGANRDFSFI-IKQNGMFSFS--GLT--------------------------K----EQVLRLREEFGVYAVAS---G--  373 (396)
T ss_dssp             TTCCSCCTHH-HHCCSSEEEC--CCC--------------------------H----HHHHHHHHHHCEECCTT---C--
T ss_pred             hCCCCCccee-cCCCeEEEee--CCC--------------------------H----HHHHHHHHhCCEEECCC---C--
Confidence            621   2222 2334555542  211                          1    22344444333444332   2  


Q ss_pred             EEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144          473 VLRFAAGNSMTMESHVRAAWTVVQEH  498 (502)
Q Consensus       473 ~lR~~~~~~~t~~~di~~~~~~l~~~  498 (502)
                        |+++++.  ++++|+++.++|.++
T Consensus       374 --Ri~~a~l--~~~~i~~~~~ai~~v  395 (396)
T d2q7wa1         374 --RVNVAGM--TPDNMAPLCEAIVAV  395 (396)
T ss_dssp             --EEEGGGC--CTTTHHHHHHHHHHH
T ss_pred             --EEEecCC--CHHHHHHHHHHHHHh
Confidence              9998743  455899999999876

>d1yaaa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]

Probab=99.59  E-value=3.7e-14  Score=142.48  Aligned_cols=333  Identities=9%  Similarity=0.007  Sum_probs=196.2

Q ss_pred             HHHHHHHHhhcCC--CCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHh
Q 037144           91 GIVGEMLSSGFNV--VGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKI  168 (502)
Q Consensus        91 ~~~~~~l~~~~n~--~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~  168 (502)
                      ..+.+......+.  ....|....+..++.+++.+++.+..+......   .-.++.+++++.+...++......     
T Consensus        50 ~~V~~A~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-----  121 (412)
T d1yaaa_          50 PSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNAAKIIFGTQSDALQED---RVISVQSLSGTGALHISAKFFSKF-----  121 (412)
T ss_dssp             HHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTT---CEEEEEEEHHHHHHHHHHHHHHHH-----
T ss_pred             HHHHHHHHHHHhCcccCCCCCCCCCCHHHHHHHHHHHhcccCcccccc---ceeEEecccchhHHHHHHHHHhcc-----
Confidence            3344444433322  234577788889999999999988776421110   001222233333332222211111     


Q ss_pred             CccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144          169 GRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA  248 (502)
Q Consensus       169 ~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~  248 (502)
                          .+++.|++++..+......++..|.   +++.+|+..++++..+.+.+++.+...+   ....+++.+.++|+||.
T Consensus       122 ----~~gd~Vlip~P~~~~y~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~i~~P~NPTG~  191 (412)
T d1yaaa_         122 ----FPDKLVYLSKPTWANHMAIFENQGL---KTATYPYWANETKSLDLNGFLNAIQKAP---EGSIFVLHSCAHNPTGL  191 (412)
T ss_dssp             ----CTTCCEEEEESCCTTHHHHHHTTTC---CEEEEECEETTTTEECHHHHHHHHHHSC---TTCEEEEECSSCTTTCC
T ss_pred             ----CCCCEEecccccCchhHHHHHHcCC---ceecccccccccccccchhhhcccccCC---CceEEEEecCCCCCccc
Confidence                1678899999999999999999999   9999998766678899999988887543   23568888999999999


Q ss_pred             cC---ChhHHHHHHHHhCCEEEeecccccccccCccchh-----hhcCCCCC--CeeEEccCCcCC-CCCcceEEEeeCc
Q 037144          249 VD---PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRH-----FIDGVECV--DSFSFNPHKWLF-TTLDCCCLWVKDP  317 (502)
Q Consensus       249 id---pl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~-----~~~~~~~a--Dsi~~~~hK~l~-~p~~~g~~~~r~~  317 (502)
                      +-   .+++|+++|++++++++.|.+|............     ........  -++..++.|.++ ....+|++++...
T Consensus       192 ~~s~~~~~~i~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~~~~~~~  271 (412)
T d1yaaa_         192 DPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKNAGMYGERVGCFHLALT  271 (412)
T ss_dssp             CCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTTCCEEEEEECTTTSCCGGGCEEEEEEECC
T ss_pred             cCCHHHHHHHHhhhccCCEEEeecceeeecccCCcccchhhhhhhhhccccCCCeEEEEecCCccccCcCceEEEEEchh
Confidence            94   5889999999999999999999876553211100     01111112  256668999876 5677888887654


Q ss_pred             hh-----hhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--------cHHHHHHHHHHHHH
Q 037144          318 SC-----LLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--------GVANLRNFIRSHVG  384 (502)
Q Consensus       318 ~~-----l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--------g~~g~~~~~~~~~~  384 (502)
                      ..     ....+..........                +..+.   ..+....+...+        ..+.++.+.+++.+
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~---~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  332 (412)
T d1yaaa_         272 KQAQNKTIKPAVTSQLAKIIRS----------------EVSNP---PAYGAKIVAKLLETPELTEQWHKDMVTMSSRITK  332 (412)
T ss_dssp             SCTTHHHHHHHHHHHHHHHHHT----------------TTSSC---CHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhHHHHHHHHHHHHHHHHHH----------------HhcCC---ChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHH
Confidence            21     011110000000000                00000   112222222222        13445667777888


Q ss_pred             HHHHHHHHHhcCCC---eEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcE
Q 037144          385 MAKLFERLVTSDKR---FEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKV  461 (502)
Q Consensus       385 la~~l~~~l~~~~~---~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~  461 (502)
                      +++.+.+.|+++..   |..+ +++.++++|.  +..                          .+    ++++|.++..+
T Consensus       333 ~r~~l~~~L~~~g~~~~~~~~-~~~gG~F~~~--~ls--------------------------~e----~~~~L~~e~~V  379 (412)
T d1yaaa_         333 MRHALRDHLVKLGTPGNWDHI-VNQCGMFSFT--GLT--------------------------PQ----MVKRLEETHAV  379 (412)
T ss_dssp             HHHHHHHHHHHHTCSSCCTHH-HHCCSSEEEC--CCC--------------------------HH----HHHHHHHHHCE
T ss_pred             HHHHHHHHHHHhCCCCCCcee-CCCceEEEec--CcC--------------------------HH----HHHHHHHhCCE
Confidence            88888888877621   2222 3455665552  211                          12    23334333334


Q ss_pred             EEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHhC
Q 037144          462 FMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEAF  502 (502)
Q Consensus       462 ~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~~  502 (502)
                      ++.++       .||++++.  +++.|+++.++|.++.+.|
T Consensus       380 ~~~~g-------~Ris~~g~--~~~~i~~l~~ai~~v~k~~  411 (412)
T d1yaaa_         380 YLVAS-------GRASIAGL--NQGNVEYVAKAIDEVVRFY  411 (412)
T ss_dssp             ECCTT-------SEEEGGGC--CTTTHHHHHHHHHHHHHHC
T ss_pred             EECCC-------CEEEeccC--CHHHHHHHHHHHHHHHHhh
Confidence            44442       39998753  4458999999999988754

>d2ay1a_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Paracoccus denitrificans [TaxId: 266]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.59  E-value=8.4e-15  Score=146.38  Aligned_cols=242  Identities=12%  Similarity=0.049  Sum_probs=152.1

Q ss_pred             CCHHHHHHHHHHhhcCCCCCCCCCcccccCCCCCCHHHHHHHHHHhhcCCC-CcccccChhhHHHHHHHHHHHHHhcCCC
Q 037144           54 ESVETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVV-GLDWISSPAAVELENIVMDWLGQMLDLP  132 (502)
Q Consensus        54 ~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~-~~~~~~~p~~~~le~~~~~~l~~l~g~~  132 (502)
                      .++-.+.+.+++.-.++..+-.-.-|.+- .+.+.++..+.+.+....+.. ...|....+..++.+++.+++.+..+..
T Consensus        11 d~i~~l~~~~~~d~~~~~InL~iG~~~d~-~g~~~~~~~V~~A~~~~~~~~~~~~Y~p~~G~~~lr~aia~~~~~~~~~~   89 (394)
T d2ay1a_          11 DKILALMGEFRADPRQGKIDLGVGVYKDA-TGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGELILGDGLKS   89 (394)
T ss_dssp             CSHHHHHHHHHHCCCTTCEECCCCSCCCT-TSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHHHHHGGGCCG
T ss_pred             ChHHHHHHHHhCCCCCCCEEccCCCccCC-CCCCCCCHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhcccccc
Confidence            35556666666543233332222222111 122222334566555554333 3468888888999999999988776653


Q ss_pred             CccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCC
Q 037144          133 KSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSS  212 (502)
Q Consensus       133 ~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~  212 (502)
                      ...      ..++++||+.+...++......         .+++.|+++...+......++..|.   +++.+|+..+++
T Consensus        90 ~~~------~~~~~~~~~~~~~l~~~~~~~~---------~~gd~V~~p~p~~~~y~~~~~~~g~---~~v~~~~~~~~~  151 (394)
T d2ay1a_          90 ETT------ATLATVGGTGALRQALELARMA---------NPDLRVFVSDPTWPNHVSIMNFMGL---PVQTYRYFDAET  151 (394)
T ss_dssp             GGE------EEEEEEHHHHHHHHHHHHHHHH---------CTTCCEEEEESCCHHHHHHHHHHTC---CEEEEECEETTT
T ss_pred             ccc------cceeccCchHHHHHHHHHhhhc---------CCceEEEEecccccchHHHHHHcCC---EEEEecccchhc
Confidence            322      3566666665544333322211         1677899999999999999999999   999999876556


Q ss_pred             cccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc---CChhHHHHHHHHhCCEEEeecccccccccCccchhhh--c
Q 037144          213 YGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFI--D  287 (502)
Q Consensus       213 ~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~--~  287 (502)
                      +..+.+++++.+....   .+..+++.+.++|+||.+   +.+++|+++|++|+++++.|.+|.......+......  .
T Consensus       152 ~~~~~~~~~~~~~~~~---~~~~i~~~~~p~NPTG~~~s~e~~~~l~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~  228 (394)
T d2ay1a_         152 RGVDFEGMKADLAAAK---KGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLI  228 (394)
T ss_dssp             TEECHHHHHHHHHTCC---TTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHH
T ss_pred             ccccchhHHHHHhhcc---cCcEEEEeCCCCCCCCCCCCHHHHHHHHHHhhcceEEEEEeccchhhcccccccchhhhhh
Confidence            7788888877765432   234677788899999998   4588999999999999999999987755322111110  0


Q ss_pred             CCCCCC-eeEEccCCcCCC-CCcceEEEeeCc
Q 037144          288 GVECVD-SFSFNPHKWLFT-TLDCCCLWVKDP  317 (502)
Q Consensus       288 ~~~~aD-si~~~~hK~l~~-p~~~g~~~~r~~  317 (502)
                      ...... .+..++.|.+.. ....|++.+...
T Consensus       229 ~~~~~~~~~~~s~sk~~~~~G~R~G~~~~~~~  260 (394)
T d2ay1a_         229 ASRIPEVLIAASCSKNFGIYRERTGCLLALCA  260 (394)
T ss_dssp             HHHCSSEEEEEECTTTTTCGGGCEEEEEEECS
T ss_pred             hhhcccccccccccccccCCcccccchhhchh
Confidence            001222 334456676654 466777776654

>d1ibja_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine beta-lyase, CBL
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.57  E-value=9.7e-14  Score=136.00  Aligned_cols=220  Identities=15%  Similarity=0.181  Sum_probs=157.5

Q ss_pred             ccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhH
Q 037144          109 ISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAF  188 (502)
Q Consensus       109 ~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~  188 (502)
                      ...|....+|+.    |+.+-|.+         .++.+++|..|+ .++.....           +++.|+++...|...
T Consensus        46 ~~nPt~~~le~~----la~LE~~~---------~a~~fsSGMaAi-sall~ll~-----------~Gd~vv~~~~~Yg~t  100 (380)
T d1ibja_          46 SGNPTRDALESL----LAKLDKAD---------RAFCFTSGMAAL-SAVTHLIK-----------NGEEIVAGDDVYGGS  100 (380)
T ss_dssp             TCCHHHHHHHHH----HHHHHTCS---------EEEEESSHHHHH-HHHHTTSC-----------TTCEEEEESSCCHHH
T ss_pred             CCChHHHHHHHH----HHHHcCCc---------eEEehhhHHHHH-HHHHHhhC-----------CCCEEEEEecccccc
Confidence            467777777766    56776653         467888887665 45543221           677888888888776


Q ss_pred             HHHHHH----cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCC
Q 037144          189 QKAAQI----VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGI  264 (502)
Q Consensus       189 ~~aa~~----~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~  264 (502)
                      .+..+.    .|+   .+..++.       .|++.++++++++++      +|.+..++|++..+-||++|+++|+++|+
T Consensus       101 ~~l~~~~~~~~gi---~~~~~d~-------~~~~~~~~ai~~~t~------li~~EtpsNP~l~v~Di~~i~~iA~~~g~  164 (380)
T d1ibja_         101 DRLLSQVVPRSGV---VVKRVNT-------TKLDEVAAAIGPQTK------LVWLESPTNPRQQISDIRKISEMAHAQGA  164 (380)
T ss_dssp             HHHHHHTSGGGTC---EEEEECT-------TSHHHHHHHCCSSEE------EEEECSSCTTTCCCCCHHHHHHHHHTTTC
T ss_pred             cchhhhhhccccc---cccccCc-------chHHHHHHHhccCcc------EEEeccccccccccccHHHHHHHHHHcCC
Confidence            665543    477   6666653       378889988866543      89999999999999999999999999999


Q ss_pred             EEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCcc
Q 037144          265 WVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKE  342 (502)
Q Consensus       265 ~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~  342 (502)
                      +++||.+++.....-| ...      +||.+.-+..|++++-..  .|.+.+++........ .....            
T Consensus       165 ~~vVDnT~atP~~~~P-l~~------GaDiVvhS~TKyi~GhsDv~~G~v~~~~~~~~~~~~-~~~~~------------  224 (380)
T d1ibja_         165 LVLVDNSIMSPVLSRP-LEL------GADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVY-FLQNS------------  224 (380)
T ss_dssp             EEEEECTTTCTTTCCG-GGT------TCSEEEEETTTTTTCSSCCCCEEEEECSHHHHHHHH-HHHHH------------
T ss_pred             eEEeeccccccccccc-ccc------CCCEEEecccceeccccCccccccccchhhHHHHHH-hhccc------------
Confidence            9999999977665433 222      899999999999975433  4555565543322111 00000            


Q ss_pred             cccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144          343 QEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA  402 (502)
Q Consensus       343 ~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~  402 (502)
                                 .+....+...|..++  |.+-+..+++++.++|..+.+.|++.|.++-+
T Consensus       225 -----------~G~~l~p~~a~ll~r--gl~Tl~lRm~~~~~nA~~lA~~L~~hp~V~~V  271 (380)
T d1ibja_         225 -----------EGSGLAPFDCWLCLR--GIKTMALRIEKQQENARKIAMYLSSHPRVKKV  271 (380)
T ss_dssp             -----------TTCBCCHHHHHHHHH--HHTTHHHHHHHHHHHHHHHHHHHHTCTTCCEE
T ss_pred             -----------cCCcCCHHHHHHHHh--cchhhhhhHHHHHHHHHHHHHHHHhCCCeeEE
Confidence                       111225567777776  56888999999999999999999999988754

>d1qgna_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Common tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-synthase, CGS
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=99.56  E-value=6e-13  Score=130.81  Aligned_cols=223  Identities=12%  Similarity=0.091  Sum_probs=155.2

Q ss_pred             ccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCch
Q 037144          107 DWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHC  186 (502)
Q Consensus       107 ~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~  186 (502)
                      .-...|....+|+.    ++++-|..         ..+++++|..|+..++.+...           +++.|+++...|.
T Consensus        62 ~R~~nPt~~~LE~~----la~LEgg~---------~a~~~sSGMaAi~~~l~~l~~-----------~Gd~iv~~~~~Yg  117 (398)
T d1qgna_          62 GRYGNPTTVVLEEK----ISALEGAE---------STLLMASGMCASTVMLLALVP-----------AGGHIVTTTDCYR  117 (398)
T ss_dssp             GGGCCHHHHHHHHH----HHHHHTCS---------EEEEESCHHHHHHHHHHHHSC-----------SSCEEEEETTSCH
T ss_pred             cCCCChHHHHHHHH----HHHHhCCc---------eEEEecCcchHHHHHHhhccc-----------ccccccccccccc
Confidence            33467877778876    56666643         468888888887666655432           6788888888876


Q ss_pred             hHHHH----HHHcCCCCCCEEEEecCCCCCcccCHHHHHHHH-HHHHhcCCccEEEEEecCCccccccCChhHHHHHHHH
Q 037144          187 AFQKA----AQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQI-NLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQ  261 (502)
Q Consensus       187 s~~~a----a~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i-~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~  261 (502)
                      ...+.    ...+|+   .+..++..       +.+..++.+ .+.+      .+|.+-.++|++..+-||++|+++|++
T Consensus       118 ~t~~l~~~~~~~~gi---~~~~~~~~-------~~~~~~~~~~~~~t------~~v~~EspsNP~l~v~Di~~ia~ia~~  181 (398)
T d1qgna_         118 KTRIFIETILPKMGI---TATVIDPA-------DVGALELALNQKKV------NLFFTESPTNPFLRCVDIELVSKLCHE  181 (398)
T ss_dssp             HHHHHHHHTGGGGTC---EEEEECSS-------CHHHHHHHHHHSCE------EEEEEESSCTTTCCCCCHHHHHHHHHH
T ss_pred             hhhhhhccccccccc---cccccccc-------chhhhhhhhccccc------eEEEccCccccccccchHHHHHHHHhh
Confidence            55444    344677   77777532       445444443 3333      488999999999999999999999999


Q ss_pred             hCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc-ceEEEeeCchhhhhhhcCCcccccCccCCCCC
Q 037144          262 FGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD-CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEP  340 (502)
Q Consensus       262 ~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~-~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~  340 (502)
                      +|+.++||.+++...+.-| ...      +||.+.-+..|++++... .|..++.+.........    +...       
T Consensus       182 ~g~~~vVDnT~atP~~~~P-l~~------GaDiVihS~TKy~~Ghsdv~~G~v~~~~~~~~~~~~----~~~~-------  243 (398)
T d1qgna_         182 KGALVCIDGTFATPLNQKA-LAL------GADLVLHSATKFLGGHNDVLAGCISGPLKLVSEIRN----LHHI-------  243 (398)
T ss_dssp             TTCEEEEECTTTCTTTCCT-TTT------TCSEEEECTTTTTTCSSSCCCEEEEECHHHHHHHHH----HHHH-------
T ss_pred             cCCEEEecceeeccccCCc-hhh------CCCEEEEechhhcCcccceeehhhcchhhhhhhhhh----hccc-------
Confidence            9999999999977655433 222      899999999999976543 23344555543322110    1100       


Q ss_pred             cccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144          341 KEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA  402 (502)
Q Consensus       341 ~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~  402 (502)
                                   .+--..+...|..++  |.+-+..+++++.++|..+.+.|+++|.++-+
T Consensus       244 -------------~G~~l~p~~a~ll~r--gl~TL~lRm~~~~~nA~~lA~~L~~hp~V~~V  290 (398)
T d1qgna_         244 -------------LGGALNPNAAYLIIR--GMKTLHLRVQQQNSTALRMAEILEAHPKVRHV  290 (398)
T ss_dssp             -------------HCCCCCHHHHHHHHH--HGGGHHHHHHHHHHHHHHHHHHHHTCTTEEEE
T ss_pred             -------------CCCcCCHHHHHHHHh--cchHHHHHHHHHHHHHHHHHHHHHhCCCeeec
Confidence                         011125567787776  55888999999999999999999999999744

>d3tata_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Escherichia coli [TaxId: 562]

Probab=99.53  E-value=1.4e-14  Score=144.84  Aligned_cols=208  Identities=13%  Similarity=-0.052  Sum_probs=142.0

Q ss_pred             HHHHHHHHhhcCC--CCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHh
Q 037144           91 GIVGEMLSSGFNV--VGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKI  168 (502)
Q Consensus        91 ~~~~~~l~~~~n~--~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~  168 (502)
                      ..+.++.....+.  ....|....+..++.+.+.+|+.+..|.+...     ...+.+.+++.+...++.........  
T Consensus        47 ~~V~~A~~~l~~~~~~~~~Y~p~~G~~~lR~aia~~~~~~~~~~~~~-----~~i~~~~~~~~~~~~~l~~~~~~~~~--  119 (397)
T d3tata_          47 QAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLFGADHPVLKQ-----QRVATIQTLGGSGALKVGADFLKRYF--  119 (397)
T ss_dssp             HHHHHHHHHHTTSCCSSBCCCCTTCCHHHHHHHHHHHTCSSCHHHHT-----TCEEECCBSHHHHHHHHHHHHHHHHC--
T ss_pred             HHHHHHHHHHHhCcccCCCCCCcccCHHHHHHHHHHHhhccCCcCCc-----CcEEEecCchhHHHHHHHHHHhhhcC--
Confidence            4455554443322  24458888889999999999988877753221     13455555555444444433332222  


Q ss_pred             CccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144          169 GRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA  248 (502)
Q Consensus       169 ~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~  248 (502)
                           +++.|+++++.+......++.+|.   +++.+|++.++.+..|.+++.+.+....   .++.+++.+.++|+||.
T Consensus       120 -----pgd~Vlv~~P~y~~y~~~~~~~G~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~p~NPTG~  188 (397)
T d3tata_         120 -----PESGVWVSDPTWENHVAIFAGAGF---EVSTYPWYDEATNGVRFNDLLATLKTLP---ARSIVLLHPCCHNPTGA  188 (397)
T ss_dssp             -----SSCCCEECSSCCTTHHHHHHTTTC---CCEECCCCCTTTSSCCHHHHHHHHTTCC---SSCCCEECSSSCSSSCC
T ss_pred             -----CCCcceecccCccccHHHHHHcCC---EEEEEecchhhccccchHHHHHHhhhcc---cccEEEEecCCCCCCCe
Confidence                 788899999999999999999999   9999999877778889888887765432   23457788889999999


Q ss_pred             c---CChhHHHHHHHHhCCEEEeecccccccccCccchhh---hcCCCCCC-eeEEccCCcCCC-CCcceEEEeeCc
Q 037144          249 V---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF---IDGVECVD-SFSFNPHKWLFT-TLDCCCLWVKDP  317 (502)
Q Consensus       249 i---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~---~~~~~~aD-si~~~~hK~l~~-p~~~g~~~~r~~  317 (502)
                      +   +.+++|+++|++|+++++.|.+|....+..+.....   .... .-. .+..++.|.++. ...+|++.....
T Consensus       189 ~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~-~~~~i~~~s~SK~~~~~G~RiG~~~~~~~  264 (397)
T d3tata_         189 DLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASA-GLPALVSNSFSKIFSLYGERVGGLSVMCE  264 (397)
T ss_dssp             CCCHHHHHHHHHHHHHTTCCCEECBSCTTSSSCHHHHHHHHHHHHTT-TCCCEECBCCHHHHTBTTTCCBCCEEECS
T ss_pred             eCCHHHHHHHHHHHhhcCeeEEeehhhhhhccCCcccchhhhhhhhc-CCceEEEecCcccccccCccccccccchh
Confidence            8   557889999999999999999998765432111111   1111 122 445668898765 466788776554

>d1e5ea_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL1 [TaxId: 5722]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Trichomonas vaginalis, MGL1 [TaxId: 5722]

Probab=99.50  E-value=2.5e-12  Score=126.60  Aligned_cols=223  Identities=14%  Similarity=0.167  Sum_probs=158.2

Q ss_pred             cccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh
Q 037144          108 WISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA  187 (502)
Q Consensus       108 ~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s  187 (502)
                      -...|....+|+.    ++.+-|.+         .++.++||..|+..++.+...           +++.|+++...+..
T Consensus        55 R~~nPT~~~le~~----la~LEg~~---------~a~~~sSGmaAi~~~~l~l~~-----------~gd~vv~~~~~yg~  110 (394)
T d1e5ea_          55 RLGNPTVSNLEGK----IAFLEKTE---------ACVATSSGMGAIAATVLTILK-----------AGDHLISDECLYGC  110 (394)
T ss_dssp             TTCCHHHHHHHHH----HHHHHTCS---------EEEEESSHHHHHHHHHHHHCC-----------TTCEEEEESCCCHH
T ss_pred             CCCCHHHHHHHHH----HHHHhCCc---------ceeeeccchHHHHHHHHhhcc-----------cccccccccceeeh
Confidence            3467777778866    66776654         367788888777666655433           67888888877755


Q ss_pred             HH----HHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHH-h
Q 037144          188 FQ----KAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQ-F  262 (502)
Q Consensus       188 ~~----~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~-~  262 (502)
                      ..    +.....|+   .+..++..       |+++++++|++.++      +|.+..++|++..+-|++++++++++ +
T Consensus       111 t~~~~~~~~~~~gi---~~~~~d~~-------d~~~~~~~i~~~t~------lv~~Etp~NP~l~v~Di~~~~~~~~~~~  174 (394)
T d1e5ea_         111 THALFEHALTKFGI---QVDFINTA-------IPGEVKKHMKPNTK------IVYFETPANPTLKIIDMERVCKDAHSQE  174 (394)
T ss_dssp             HHHHHHTHHHHTTC---EEEEECTT-------STTHHHHHCCTTEE------EEEEESSCTTTCCCCCHHHHHHHHHTST
T ss_pred             hhHhHHHHhhccce---eeeccCCC-------CHHHHHHhhccccc------EEEEeccCCcceeeehhhhhhhcccccc
Confidence            33    34556788   88888753       66788998877654      89999999999999999999887764 7


Q ss_pred             CCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCC
Q 037144          263 GIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEP  340 (502)
Q Consensus       263 g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~  340 (502)
                      |+.++||.+++...+.-| ...      +||.+.-+..|++++...  +|+++.++.........    ++...      
T Consensus       175 g~~vvvDnT~atP~~~~P-l~~------GaDiVvhS~TKy~~GhsDv~~G~v~~~~~~~~~~~~~----~~~~~------  237 (394)
T d1e5ea_         175 GVLVIADNTFCSPMITNP-VDF------GVDVVVHSATKYINGHTDVVAGLICGKADLLQQIRMV----GIKDI------  237 (394)
T ss_dssp             TCEEEEECTTTCTTTCCG-GGG------TCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHT----CCCCC------
T ss_pred             CeEEEecCcccCcccCCc-hhc------CCCEEEechhhhcCCCcccccccccchhhHHHHHHHH----HHHHh------
Confidence            899999999977665433 332      899999999999975533  45555544332211111    11100      


Q ss_pred             cccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144          341 KEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA  402 (502)
Q Consensus       341 ~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~  402 (502)
                                   .+-...+..+|..++  |.+-+..+++++.++|..+.+.|+++|.++-+
T Consensus       238 -------------~G~~lsp~~a~ll~r--gl~TL~lRm~r~~~nA~~lA~~L~~hp~V~~V  284 (394)
T d1e5ea_         238 -------------TGSVISPHDAWLITR--GLSTLNIRMKAESENAMKVAEYLKSHPAVEKV  284 (394)
T ss_dssp             -------------CCCCCCHHHHHHHHH--HHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEE
T ss_pred             -------------hCCCCChHHHHHHHh--hchhHHHHHHHHHHHHHHHHHHHhhcCCccEE
Confidence                         111225567777776  56888999999999999999999999998654

>d2ctza1 c.67.1.3 (A:1-421) O-acetyl-L-homoserine sulfhydrylase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: O-acetyl-L-homoserine sulfhydrylase
species: Thermus thermophilus [TaxId: 274]

Probab=99.50  E-value=2.6e-12  Score=126.99  Aligned_cols=246  Identities=13%  Similarity=0.110  Sum_probs=157.2

Q ss_pred             ccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCch
Q 037144          107 DWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHC  186 (502)
Q Consensus       107 ~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~  186 (502)
                      +-...|....+|+.    |+.+-|..         .++.+++|..|+..++.+...           +++.|+++...+.
T Consensus        53 sR~~nPT~~~LE~~----la~LE~~~---------~a~~~~SGmaAi~~~~~~l~~-----------~gd~il~~~~~Yg  108 (421)
T d2ctza1          53 SRIMNPTVDVLEKR----LAALEGGK---------AALATASGHAAQFLALTTLAQ-----------AGDNIVSTPNLYG  108 (421)
T ss_dssp             BTTBCHHHHHHHHH----HHHHHTCS---------EEEEESSHHHHHHHHHHHHCC-----------TTCEEEECSCCCH
T ss_pred             cCCCCHHHHHHHHH----HHHHhCCC---------eEEEecChHHHHHHHHHhhcc-----------cccceeecCCcCC
Confidence            33467777777766    56665543         467888888776555554433           6788889988885


Q ss_pred             hHHH----HHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh
Q 037144          187 AFQK----AAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF  262 (502)
Q Consensus       187 s~~~----aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~  262 (502)
                      ...+    .....|+   .+..++.+      -..+..++.++++++      +|.+-.++|++..+-||++|+++|+++
T Consensus       109 ~t~~l~~~~~~~~gi---~~~~~d~~------~~~~~~~~~~~~~t~------li~~EtpsNP~l~v~Di~~i~~iA~~~  173 (421)
T d2ctza1         109 GTFNQFKVTLKRLGI---EVRFTSRE------ERPEEFLALTDEKTR------AWWVESIGNPALNIPDLEALAQAAREK  173 (421)
T ss_dssp             HHHHHHHTHHHHTTC---EEEECCTT------CCHHHHHHHCCTTEE------EEEEESSCTTTCCCCCHHHHHHHHHHH
T ss_pred             chhHHHHHHHhhccc---cceecccc------cCcchhccccCCCce------EEEEcCCCcceeEecchHHHHHHHHhc
Confidence            5443    4456788   77776532      144555666665554      899999999999999999999999999


Q ss_pred             CCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhh-----hcCCcccccCcc
Q 037144          263 GIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLST-----LSTNPQYLKNEA  335 (502)
Q Consensus       263 g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~-----~~~~~~yl~~~~  335 (502)
                      |+.++||..++...+.+.....      +||.+.-+..|++++...  .|+++..+.......     ....+.|-....
T Consensus       174 g~~~vvDnT~a~tP~~~~Pl~~------GaDiVvhS~TKyl~GHsD~l~G~vv~~~~~~~~~~r~~~~~~~~~~~~~~~~  247 (421)
T d2ctza1         174 GVALIVDNTFGMGGYLLRPLAW------GAALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRL  247 (421)
T ss_dssp             TCEEEEECGGGGGGTSCCGGGG------TCSEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCH
T ss_pred             CCceEecccccccceecccccc------CCcEEEEechhhccCCCCeEEEEEEcCCcchhhhcccccccCCchhhhhhHH
Confidence            9999999999744443333333      899999999999975433  455555443211000     000001100000


Q ss_pred             CCCCCcccccCCCc-----ccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144          336 TDQEPKEQEVGYKD-----WQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA  402 (502)
Q Consensus       336 ~~~~~~~~~~~~~~-----~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~  402 (502)
                      ..   .-+...+..     ..-..+-...+...|..++  |.+-+.-+++++.++|..+.+.|++.|.++-+
T Consensus       248 ~~---~~~~~~~~~~~~~~~~~~~G~~~sP~~a~l~~r--gl~TL~lRm~~~~~nA~~vA~~L~~hp~V~~V  314 (421)
T d2ctza1         248 TE---AFGELAFIVKARVDGLRDQGQALGPFEAWVVLL--GMETLSLRAERHVENTLHLAHWLLEQPQVAWV  314 (421)
T ss_dssp             HH---HHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHH--HHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEE
T ss_pred             HH---HhccHHHHHHHHHHHHHhccCCCCHHHHHHHhc--CCcchhhHHHHHHHHHHHHHhhhccCCCeeEE
Confidence            00   000000000     0000122335567787776  56788899999999999999999999998644

>d1pffa_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL2 [TaxId: 5722]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Trichomonas vaginalis, MGL2 [TaxId: 5722]

Probab=99.49  E-value=7.5e-13  Score=127.62  Aligned_cols=212  Identities=13%  Similarity=0.124  Sum_probs=150.1

Q ss_pred             HHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhH----HHHHHHcCCC
Q 037144          123 DWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAF----QKAAQIVGID  198 (502)
Q Consensus       123 ~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~----~~aa~~~Glg  198 (502)
                      +.++.+-|..         .++.++||..|+..++.+...           +++.|+++...|...    .+....+|+ 
T Consensus         5 ~~la~Leg~~---------~a~~~sSGMaAi~~~l~~ll~-----------~Gd~iv~~~~~Yg~t~~~~~~~l~~~gi-   63 (331)
T d1pffa_           5 GKIAKLEHAE---------ACAATASGMGAIAASVWTFLK-----------AGDHLISDDCLYGCTHALFEHQLRKFGV-   63 (331)
T ss_dssp             HHHHHHHTCS---------EEEEESSHHHHHHHHHHHHCC-----------TTCEEEEESCCCHHHHHHHHTHHHHTTC-
T ss_pred             HHHHHHhCCC---------eEEEECCHHHHHHHHHHHHhC-----------CCCEEEEeCCCchHHHHHHHHHHHhcCe-
Confidence            3467776643         467888998887666665433           677888888777543    344566898 


Q ss_pred             CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHH-HHhCCEEEeecccccccc
Q 037144          199 RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVA-KQFGIWVHVDAAYAGSAC  277 (502)
Q Consensus       199 ~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~-~~~g~~lhVDaA~g~~~~  277 (502)
                        ++..++..       |++.+++++++.++      +|.+..++|++..+.|++++.+++ +++|+.++||-+++.+.+
T Consensus        64 --~~~~~d~~-------d~~~~~~~i~~~t~------~i~~Es~~np~~~v~d~~~~~~~~a~~~~~~~vVDnT~atp~~  128 (331)
T d1pffa_          64 --EVDFIDMA-------VPGNIEKHLKPNTR------IVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPIL  128 (331)
T ss_dssp             --EEEEECTT-------STTHHHHTCCTTEE------EEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHH
T ss_pred             --EEEEeccc-------chhhHhhhcccccc------eeeeecccccccccccchhhhhhhhcccCceEEeecccccccc
Confidence              88888653       67888888876654      888999999999999999999985 568999999999977665


Q ss_pred             cCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCC
Q 037144          278 ICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLC  355 (502)
Q Consensus       278 ~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~s  355 (502)
                      .-| ...      +||.+.-+..|++++-..  .|.++.++.... .....   ++...                   .+
T Consensus       129 ~~p-l~~------GaDiVv~S~TKy~~Gh~d~~~G~v~~~~~~~~-~~~~~---~~~~~-------------------~G  178 (331)
T d1pffa_         129 TNP-LDL------GVDIVVHSATKYINGHTDVVAGLVCSRADIIA-KVKSQ---GIKDI-------------------TG  178 (331)
T ss_dssp             CCG-GGG------TCSEEEEETTTTTSSSSSCCCEEEEECHHHHH-HHHHT---CCCCC-------------------CC
T ss_pred             ccc-ccc------CCCEEEecchhhcCCCCccccccccccccchh-hhhhh---hhhhc-------------------cC
Confidence            433 222      799999999999975422  355554433222 11111   01000                   11


Q ss_pred             CCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144          356 RRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA  402 (502)
Q Consensus       356 r~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~  402 (502)
                      ....+..+|..++  |.+-+..+++++.++|..+.+.|++.|.++-+
T Consensus       179 ~~l~p~~a~ll~r--gl~Tl~~Rm~~~~~nA~~lA~~L~~hp~V~~V  223 (331)
T d1pffa_         179 AIISPHDAWLITR--GTLTLDMRVKRAAENAQKVAEFLHEHKAVKKV  223 (331)
T ss_dssp             CCCCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCE
T ss_pred             CCCCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhhhhCCcEEee
Confidence            1225567787776  56889999999999999999999999988543

>d1cl1a_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine beta-lyase, CBL
species: Escherichia coli [TaxId: 562]

Probab=99.47  E-value=3.8e-12  Score=125.07  Aligned_cols=224  Identities=11%  Similarity=0.119  Sum_probs=158.7

Q ss_pred             ccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCch
Q 037144          107 DWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHC  186 (502)
Q Consensus       107 ~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~  186 (502)
                      .-...|....+|+.    ++++-|..         .++.+++|..|+..++.+...           +++.|+++...|.
T Consensus        53 ~R~~nPt~~~le~~----la~LEg~~---------~a~~~~SGMaAi~~~l~~l~~-----------~Gd~iv~~~~~Yg  108 (391)
T d1cl1a_          53 GRRGTLTHFSLQQA----MCELEGGA---------GCVLFPCGAAAVANSILAFIE-----------QGDHVLMTNTAYE  108 (391)
T ss_dssp             TTTCCHHHHHHHHH----HHHHHTCS---------EEEEESSHHHHHHHHHHHHCC-----------TTCEEEEETTSCH
T ss_pred             ECCCChhHHHHHHH----HHHHhCCc---------cEEEeccccceeeehhhcccC-----------CCCeEEEeccccc
Confidence            33467777777766    56776643         468888888888766665533           6778888988887


Q ss_pred             hHHHHHH----HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh
Q 037144          187 AFQKAAQ----IVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF  262 (502)
Q Consensus       187 s~~~aa~----~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~  262 (502)
                      ...+..+    ..|+   ++..++..       |.++++++++++++      +|.+-.++|++..+-||++|+++|+++
T Consensus       109 ~T~~l~~~~l~~~Gi---~~~~~d~~-------d~~~~~~~i~~~t~------~i~~EtpsNP~l~v~Di~~i~~~a~~~  172 (391)
T d1cl1a_         109 PSQDFCSKILSKLGV---TTSWFDPL-------IGADIVKHLQPNTK------IVFLESPGSITMEVHDVPAIVAAVRSV  172 (391)
T ss_dssp             HHHHHHHHTGGGGTC---EEEEECTT-------CGGGGGGTCCTTEE------EEEEESSCTTTCCCCCHHHHHHHHHHH
T ss_pred             chhhhhhhccccccc---ccccccCc-------cccccccccccccc------eeeecccCcccccccccHHHHHHHHhc
Confidence            6555443    4576   77776532       56778888776554      899999999999999999999999875


Q ss_pred             --CCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc-ceEEEeeCchhhhhhhcCCcccccCccCCCC
Q 037144          263 --GIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD-CCCLWVKDPSCLLSTLSTNPQYLKNEATDQE  339 (502)
Q Consensus       263 --g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~-~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~  339 (502)
                        |+.++||.+++...+.-| ...      +||.+.-+..|++++-.. .|.+++.++......... . +.        
T Consensus       173 ~~g~~~vVDnT~atP~~~~P-l~~------GaDivvhS~TKy~~GhsdvlgG~vv~~~~~~~~~~~~-~-~~--------  235 (391)
T d1cl1a_         173 VPDAIIMIDNTWAAGVLFKA-LDF------GIDVSIQAATKYLVGHSDAMIGTAVCNARCWEQLREN-A-YL--------  235 (391)
T ss_dssp             CTTCEEEEECTTTTTTSSCG-GGG------TCSEEEEETTTTTTCSSSCCCEEEEECTTTHHHHHHH-H-HH--------
T ss_pred             cCCcEEEEeccccchhhhcc-ccc------ccceEEeecchhccccccccccceeccccccccchhh-h-hc--------
Confidence              999999999977655433 332      899999999999976543 334444444332211100 0 00        


Q ss_pred             CcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q 037144          340 PKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAF  403 (502)
Q Consensus       340 ~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~  403 (502)
                                    .+-...+...|..++  |.+-+..+++++.++|..+.+.|+++|.++-+.
T Consensus       236 --------------~G~~~~p~~a~ll~r--gl~TL~lR~~~~~~nA~~vA~~L~~hp~V~~V~  283 (391)
T d1cl1a_         236 --------------MGQMVDADTAYITSR--GLRTLGVRLRQHHESSLKVAEWLAEHPQVARVN  283 (391)
T ss_dssp             --------------TTCCCCHHHHHHHHH--HHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEE
T ss_pred             --------------ccccCCchhhhhhhc--cchhHHHHHHHHHHHHHHHHHHHHhcccccccc
Confidence                          011124566777766  567888999999999999999999999988654

>d2byla1 c.67.1.4 (A:36-439) Ornithine aminotransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=2.3e-11  Score=121.06  Aligned_cols=301  Identities=11%  Similarity=0.039  Sum_probs=173.0

Q ss_pred             HHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH------
Q 037144          121 VMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI------  194 (502)
Q Consensus       121 ~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~------  194 (502)
                      +.+.+.++.+.+         ...++.+||+|+..|+..||............+..++......|....-+...      
T Consensus        88 ~~~~~~~~~~~~---------~v~~~~sGseA~e~Aik~ar~~~~~~~~~~~~~~~i~~~~~~~hg~t~~~~~~~~~~~~  158 (404)
T d2byla1          88 YEEYITKLFNYH---------KVLPMNTGVEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTS  158 (404)
T ss_dssp             HHHHHHHHHTCS---------EEEEESSHHHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCCSHHHHTTCCCHHH
T ss_pred             HHHhhhhccccc---------ccccccCccccchhHHHHHHHHhhhccccccccccccccCCCccccccceeccCCCccc
Confidence            445566776653         47899999999999999999764433222222334555555556433222221      


Q ss_pred             -cCC--CCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHHHHHhCCEEE
Q 037144          195 -VGI--DRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDVAKQFGIWVH  267 (502)
Q Consensus       195 -~Gl--g~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~~~~g~~lh  267 (502)
                       .+.  ....+..+|.+       |+++|++++.+.     ...+|++.-.....|.+-|    +++|.++|++||+.++
T Consensus       159 ~~~~~p~~~~~~~~p~~-------d~~~l~~~l~~~-----~iAaviiEPi~g~~G~~~~~~~~l~~l~~lc~~~g~llI  226 (404)
T d2byla1         159 YDGFGPFMPGFDIIPYN-------DLPALERALQDP-----NVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFI  226 (404)
T ss_dssp             HTTSCSCCTTEEEECTT-------CHHHHHHHHTST-----TEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEE
T ss_pred             ccCCCCCCCCeeEeccc-------CHHHHHHhcCCC-----CeEEEEECCccCCCCCccCCHHHHHHHHHHHHhcCeEEE
Confidence             122  12245566643       788999988532     2345666544555576644    9999999999999999


Q ss_pred             eecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccC
Q 037144          268 VDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVG  346 (502)
Q Consensus       268 VDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~  346 (502)
                      +|.++.|+.....-+..-..++ ..|.++++  |.++.. ...|.+++++. . .+.+.  +....+             
T Consensus       227 ~DEV~tGfgR~G~~~a~~~~gv-~PDi~~~g--K~l~gG~~p~~av~~~~~-i-~~~~~--~~~~~~-------------  286 (404)
T d2byla1         227 ADEIQTGLARTGRWLAVDYENV-RPDIVLLG--KALSGGLYPVSAVLCDDD-I-MLTIK--PGEHFS-------------  286 (404)
T ss_dssp             EECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGGTTSSCCEEEEECHH-H-HTTSC--TTSSCC-------------
T ss_pred             eeccccccccccccchhhhcCC-CCCEEEEC--chhhCCCccceeeeechh-h-hhccC--CCCCCc-------------
Confidence            9999977644433333223344 47988776  888655 46788777643 2 22221  111111             


Q ss_pred             CCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC--CeeEEEEEeecCcchhhhh
Q 037144          347 YKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR--NFSLVCFRVTPSAVMDKLR  424 (502)
Q Consensus       347 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~--~~~~v~f~~~~~~~~~~~~  424 (502)
                          |+ .+.+....+..++|..+-.+   +..++..++.+++.+.|+++.. .++...  ...+..+.+....      
T Consensus       287 ----T~-~gnpl~~aaa~a~L~~i~~~---~l~~~~~~~g~~l~~~l~~l~~-~~i~~vRg~Gl~~~i~~~~~~------  351 (404)
T d2byla1         287 ----TY-GGNPLGCRVAIAALEVLEEE---NLAENADKLGIILRNELMKLPS-DVVTAVRGKGLLNAIVIKETK------  351 (404)
T ss_dssp             ----SS-TTCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHTSCT-TTEEEEEEETTEEEEEECCCS------
T ss_pred             ----CC-CcCHHHHHHHHHHHHHHHhc---CchhhhhHhhHHHHHHHHhhcc-ccceeeeecccEEEEEEecCC------
Confidence                00 11111223334445544333   3556677788889888887522 111110  0113344443211      


Q ss_pred             hcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHhC
Q 037144          425 TKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEAF  502 (502)
Q Consensus       425 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~~  502 (502)
                                          .....++.+++.++|.+....  .  ...+|++.. ...+++|||++++.|++..++|
T Consensus       352 --------------------~~~~~~~~~~l~~~Gvl~~~~--~--~~~i~l~Pp-L~it~~~id~~~~~l~~al~~f  404 (404)
T d2byla1         352 --------------------DWDAWKVCLRLRDNGLLAKPT--H--GDIIRFAPP-LVIKEDELRESIEIINKTILSF  404 (404)
T ss_dssp             --------------------SCCHHHHHHHHHHTTEECEEE--E--TTEEEECCC-TTCCHHHHHHHHHHHHHHHHTC
T ss_pred             --------------------chhHHHHHHHHHhCCeEEecC--C--CCEEEEECC-cCCCHHHHHHHHHHHHHHHHcC
Confidence                                001235677788889754321  1  236888742 3467889999999999998765

>d1o69a_ c.67.1.4 (A:) Aminotransferase homolog WlaK (PglE, Cj1121c) {Campylobacter jejuni [TaxId: 197]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Aminotransferase homolog WlaK (PglE, Cj1121c)
species: Campylobacter jejuni [TaxId: 197]

Probab=99.43  E-value=2.1e-12  Score=127.62  Aligned_cols=234  Identities=14%  Similarity=0.027  Sum_probs=150.0

Q ss_pred             ChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHH
Q 037144          111 SPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQK  190 (502)
Q Consensus       111 ~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~  190 (502)
                      +|....+|++    +++.+|...         ++++++||.|++.|+.+..-+          ++++|++|..++.+...
T Consensus        20 G~~~~~fE~~----~~~~~~~~~---------~~~~~SgT~Al~lal~~l~~~----------~gdeVi~p~~t~~a~~~   76 (374)
T d1o69a_          20 GEFVNRFEQS----VKDYSKSEN---------ALALNSATAALHLALRVAGVK----------QDDIVLASSFTFIASVA   76 (374)
T ss_dssp             THHHHHHHHH----HHHHHCCSE---------EEEESCHHHHHHHHHHHTTCC----------TTCEEEEESSSCGGGTH
T ss_pred             CHHHHHHHHH----HHHHHCcCe---------EEEeCCHHHHHHHHHHHcCCC----------CcCEEEeCCcchHhhHH
Confidence            7888888877    567777753         689999999999888765321          67899999999999999


Q ss_pred             HHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeec
Q 037144          191 AAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDA  270 (502)
Q Consensus       191 aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDa  270 (502)
                      ++..+|+   .++.++++++ ...++++..+. ......   .+.+|++++   ..|...++++|.++|+++|+.|+.|+
T Consensus        77 ~~~~~g~---~pv~~Di~~~-~~~~~~~~~~~-~~~~~~---~~~aii~~~---~~G~~~d~~~i~~~~~~~~i~vIED~  145 (374)
T d1o69a_          77 PICYLKA---KPVFIDCDET-YNIDVDLLKLA-IKECEK---KPKALILTH---LYGNAAKMDEIVEICKENDIVLIEDA  145 (374)
T ss_dssp             HHHHTTC---EEEEECBCTT-SSBCHHHHHHH-HHHCSS---CCCEEEEEC---GGGCCCCHHHHHHHHHHTTCEEEEEC
T ss_pred             HHhhccc---eeEecccccc-ccccccccccc-chhccc---ccccccccc---cccchhhhHHHHHHhhccCcchhhhh
Confidence            9999999   9999999863 23444443332 222211   123555544   57889999999999999999999999


Q ss_pred             ccccccccCccchhhhcCCCCCCe--eEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCC
Q 037144          271 AYAGSACICPEFRHFIDGVECVDS--FSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYK  348 (502)
Q Consensus       271 A~g~~~~~~~~~~~~~~~~~~aDs--i~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~  348 (502)
                      |++-+...-.    ...|- ..|.  +++.+.|.+.+. +.|++++.++.................        ...   
T Consensus       146 a~a~g~~~~~----~~~G~-~gd~~~fSf~~~K~l~tg-eGG~i~tnn~~~~~~~~~~~~~g~~~~--------~~~---  208 (374)
T d1o69a_         146 AEALGSFYKN----KALGT-FGEFGVYSYNGNKIITTS-GGGMLIGKNKEKIEKARFYSTQARENC--------LHY---  208 (374)
T ss_dssp             TTCTTCEETT----EETTS-SSSEEEEECCTTSSSCCS-SCEEEEESCHHHHHHHHHHTBTCCCSS--------SSC---
T ss_pred             hhhhcceECC----eecCC-CCceEEEeccCccccccc-cceeehhhhHHHHHhhccccccccccc--------ccc---
Confidence            9977654321    11121 2354  455556888764 557888877765433221110000000        000   


Q ss_pred             cccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC
Q 037144          349 DWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD  396 (502)
Q Consensus       349 ~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~  396 (502)
                       .....+-.++.-.+.+++-....+.+.+.+++..++++++.+.|.+.
T Consensus       209 -~~~~~G~N~rm~ei~Aaig~~qL~~l~~~i~~r~~i~~~y~~~L~~~  255 (374)
T d1o69a_         209 -EHLDYGYNYRLSNVLGAIGVAQMEVLEQRVLKKREIYEWYKEFLGEY  255 (374)
T ss_dssp             -CCSSCCCBCBCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             -ccccCCccccccchhhhhhHHHHhhhhhhcchhHHHHHHHHhhcccc
Confidence             00111222233333344433344667888888899999999999765

>d1n8pa_ c.67.1.3 (A:) Cystathionine gamma-lyase (CYS3) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-lyase (CYS3)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.41  E-value=1.3e-11  Score=121.24  Aligned_cols=220  Identities=12%  Similarity=0.126  Sum_probs=148.3

Q ss_pred             cccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh
Q 037144          108 WISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA  187 (502)
Q Consensus       108 ~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s  187 (502)
                      -...|....+|+.    |+.+-|..         .++.+++|..|+ .++.....           +++.|+++...+..
T Consensus        51 R~gnPT~~~lE~~----la~LE~~~---------~a~~~sSGmaAi-~~~l~~l~-----------~gd~iv~~~~~yg~  105 (393)
T d1n8pa_          51 RSQNPNRENLERA----VAALENAQ---------YGLAFSSGSATT-ATILQSLP-----------QGSHAVSIGDVYGG  105 (393)
T ss_dssp             TTCCHHHHHHHHH----HHHHTTCS---------EEEEESCHHHHH-HHHHHTSC-----------SSCEEEEESSCCHH
T ss_pred             CCCChHHHHHHHH----HHHHhCCc---------eEEEecCchhHH-Hhhhhccc-----------CCCeeeeeeeeccc
Confidence            3466777777766    66776643         367778876555 33333322           45567777777766


Q ss_pred             HHHHHH----HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHH---
Q 037144          188 FQKAAQ----IVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAK---  260 (502)
Q Consensus       188 ~~~aa~----~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~---  260 (502)
                      ......    ..|+   ++..++.        +.++++++++++++      +|.+-.++|++..+-||++|+++|+   
T Consensus       106 t~~~~~~~l~~~gi---~~~~~~~--------~~~~~~~~i~~~t~------lv~~EspsNP~l~v~Di~~ia~~a~~~~  168 (393)
T d1n8pa_         106 THRYFTKVANAHGV---ETSFTND--------LLNDLPQLIKENTK------LVWIETPTNPTLKVTDIQKVADLIKKHA  168 (393)
T ss_dssp             HHHHHHHTSTTTCS---CCEEESS--------HHHHHHHHSCSSEE------EEEECSSCTTTCCCCCHHHHHHHHHHHT
T ss_pred             chhhhhhhhhcccc---eeEEeec--------chHHHHHHhhhhcc------eeEecCcchhhhhccchhhhhhhhhhhc
Confidence            554443    3455   6666541        45678888876554      8999999999999999999999999   


Q ss_pred             -HhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCC
Q 037144          261 -QFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATD  337 (502)
Q Consensus       261 -~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~  337 (502)
                       ++|+.++||..++...+.-| ...      +||.+.-+.-|++++...  .|++..++..... .+......+      
T Consensus       169 ~~~g~~lvVDnT~atP~~~~P-l~~------GADiVvhS~TKyi~GhsDv~~G~v~~~~~~~~~-~l~~~~~~~------  234 (393)
T d1n8pa_         169 AGQDVILVVDNTFLSPYISNP-LNF------GADIVVHSATKYINGHSDVVLGVLATNNKPLYE-RLQFLQNAI------  234 (393)
T ss_dssp             TTTTCEEEEECTTTHHHHCCG-GGG------TCSEEEEETTTTTTCSSCCCCEEEEESCHHHHH-HHHHHHHHH------
T ss_pred             ccCCceEEEecCccCcccCCc-hhh------CCCEEEEccccccCCCCccccceeeecchhHHH-HHHHHHhhc------
Confidence             67899999999977765433 222      899999999999976533  3545445443321 111100011      


Q ss_pred             CCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEe
Q 037144          338 QEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD-KRFEVA  402 (502)
Q Consensus       338 ~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~-~~~~l~  402 (502)
                                       +-...+..+|..++  |.+-+..+++++.++|..+.+.|++. |.++-+
T Consensus       235 -----------------G~~~~p~~a~ll~r--gl~Tl~lR~~~~~~nA~~lA~~L~~~~~~V~~V  281 (393)
T d1n8pa_         235 -----------------GAIPSPFDAWLTHR--GLKTLHLRVRQAALSANKIAEFLAADKENVVAV  281 (393)
T ss_dssp             -----------------CCCCCHHHHHHHHH--HHTTHHHHHHHHHHHHHHHHHHHTSCTTTEEEE
T ss_pred             -----------------CCCCChHHHHHHHh--CCcchhhHHHHHHHHHHHHHHHHHhccCcEEEE
Confidence                             11124567777776  56788899999999999999999875 667654

>d1vefa1 c.67.1.4 (A:9-395) Acetylornithine/acetyl-lysine aminotransferase ArgD {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Acetylornithine/acetyl-lysine aminotransferase ArgD
species: Thermus thermophilus [TaxId: 274]

Probab=99.39  E-value=3.7e-11  Score=118.83  Aligned_cols=293  Identities=10%  Similarity=0.014  Sum_probs=167.2

Q ss_pred             HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144          116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV  195 (502)
Q Consensus       116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~  195 (502)
                      +.+.++.+.+.........       ...|+.+||+|+..|++.||... .       ++.++......|-...-+....
T Consensus        79 ~~~~~la~~l~~~~~~~~~-------~v~f~~sGseA~e~Aik~Ar~~t-~-------r~~ii~~~~~yHG~t~~~~~~s  143 (387)
T d1vefa1          79 PMRGEFYRTLTAILPPELN-------RVFPVNSGTEANEAALKFARAHT-G-------RKKFVAAMRGFSGRTMGSLSVT  143 (387)
T ss_dssp             HHHHHHHHHHHHTSCTTEE-------EEEEESSHHHHHHHHHHHHHHHH-S-------CCEEEEETTCCCCSSHHHHHTC
T ss_pred             chHHHHHHHhhhhccccce-------eeccccCchHHHHHHHHHHHhhc-c-------cceecccccCCCCCccceEecc
Confidence            3444555566665443322       47899999999999999998753 1       2334444444554443333333


Q ss_pred             CC---------CCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHHHHHh
Q 037144          196 GI---------DRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDVAKQF  262 (502)
Q Consensus       196 Gl---------g~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~~~~  262 (502)
                      |-         -...+..+|.+       |.+.|++.+.++      +.+|++.-.....|.+-|    +++|.++|++|
T Consensus       144 ~~~~~~~~~~p~~~~~~~~p~~-------d~~~l~~~~~~~------iAavi~EPi~g~~G~~~~~~~~l~~l~~lc~~~  210 (387)
T d1vefa1         144 WEPKYREPFLPLVEPVEFIPYN-------DVEALKRAVDEE------TAAVILEPVQGEGGVRPATPEFLRAAREITQEK  210 (387)
T ss_dssp             CCHHHHGGGCSCSSCEEEECTT-------CHHHHHHHCCTT------EEEEEECSEETTTTSEECCHHHHHHHHHHHHHH
T ss_pred             CCccccCCCCCCCCCceEeCCC-------CHHHHHHhcCCC------eEEEEEECCCCCCCCccCCHHHHHHHHHHHHHc
Confidence            21         11245566642       788999888654      335666544445576655    99999999999


Q ss_pred             CCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcc
Q 037144          263 GIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKE  342 (502)
Q Consensus       263 g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~  342 (502)
                      |+.+++|.++.|+......+....-++ ..|.++++  |.++..+..+.++.+++..  ..+  .+.+...         
T Consensus       211 g~llI~DEV~tGfgR~G~~~~~~~~~v-~PDi~~~g--K~l~gG~~~~~~~~~~~~~--~~~--~~~~~g~---------  274 (387)
T d1vefa1         211 GALLILDEIQTGMGRTGKRFAFEHFGI-VPDILTLA--KALGGGVPLGVAVMREEVA--RSM--PKGGHGT---------  274 (387)
T ss_dssp             TCEEEEECTTTTTTTTSSSSTHHHHTC-CCSEEEEC--GGGGTTSSCEEEEEEHHHH--HTS--CTTSSCC---------
T ss_pred             CceEEecccccccCccCCCcccccCCc-CCceeeec--ccCCCCccccccccceeee--ecc--ccCCccc---------
Confidence            999999999977633322122112234 58999987  8887667777777765432  111  1111111         


Q ss_pred             cccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC--CeEEecCCCeeEEEEEeecCcch
Q 037144          343 QEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK--RFEVAFPRNFSLVCFRVTPSAVM  420 (502)
Q Consensus       343 ~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~--~~~l~~~~~~~~v~f~~~~~~~~  420 (502)
                              |+    ...++.+.+++..+..---.+..++..++.+++.+.|+++.  .+.-+. -...+..+.+....  
T Consensus       275 --------T~----~gnPla~aaa~a~L~~l~~~~~~~~v~~~g~~l~~~L~~l~~~~v~~vr-g~Gl~~~ie~~~~~--  339 (387)
T d1vefa1         275 --------TF----GGNPLAMAAGVAAIRYLERTRLWERAAELGPWFMEKLRAIPSPKIREVR-GMGLMVGLELKEKA--  339 (387)
T ss_dssp             --------SS----TTCHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTSCCTTEEEEE-EETTEEEEEESSCS--
T ss_pred             --------cC----CCCcchhhhcccchhhcccccccchHhhhhHHHHHHHHhcCCCceEEEe-ecceEEEEEEeCCc--
Confidence                    00    11334444444333211113456677788889999998752  211110 00123344443221  


Q ss_pred             hhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144          421 DKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHL  499 (502)
Q Consensus       421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~  499 (502)
                                                 ...+.+.+.+.|.+++..    +...+|++.. ...+++|||+++++|+++.
T Consensus       340 ---------------------------~~~~~~~~~~~g~l~~~~----g~~~ir~~Pp-l~it~~~ld~~~~~i~~aL  386 (387)
T d1vefa1         340 ---------------------------APYIARLEKEHRVLALQA----GPTVIRFLPP-LVIEKEDLERVVEAVRAVL  386 (387)
T ss_dssp             ---------------------------HHHHHHHHHHHCEECEES----STTEEEECCC-TTCCHHHHHHHHHHHHHHH
T ss_pred             ---------------------------hHHHHHHHHHCCCeEEec----CCCEEEEECC-ccCCHHHHHHHHHHHHHHh
Confidence                                       123344444557654332    3457898753 4567889999999998864

>d2hoxa1 c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativum) [TaxId: 4682]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Alliinase
species: Garlic (Allium sativum) [TaxId: 4682]

Probab=99.37  E-value=2.1e-12  Score=129.18  Aligned_cols=296  Identities=10%  Similarity=-0.016  Sum_probs=171.6

Q ss_pred             HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH
Q 037144          115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI  194 (502)
Q Consensus       115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~  194 (502)
                      .+|++++.+.- ...|-....    ....++++|+++++..++.+.....   ......+++.|+++.+.+..+...+++
T Consensus       103 ~~L~~~i~~lh-~~~gna~t~----~~~IvvG~Gsteli~~~~~AL~~~~---~~~~~~pg~~Vv~~~P~y~~Y~~~~~~  174 (425)
T d2hoxa1         103 FELEKTIKELH-EVVGNAAAK----DRYIVFGVGVTQLIHGLVISLSPNM---TATPDAPESKVVAHAPFYPVFREQTKY  174 (425)
T ss_dssp             HHHHHHHHHHH-HHHTCBCCT----TCEEEEESHHHHHHHHHHHHHSCCT---TTCTTSCCEEEEECSSCCHHHHHHHHH
T ss_pred             HHHHHHHHHHH-hhhCCCCCC----CCEEEECCCHHHHHHHHHHHhcccc---ccccCCCCCEEEEecCccccHHHHHHH
Confidence            56777665544 344421110    0137888888887766555442100   000012678899999899888888999


Q ss_pred             cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccccc
Q 037144          195 VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAG  274 (502)
Q Consensus       195 ~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~  274 (502)
                      +|.   ....++        +|.+.++++++++      +.+++++.|+|+||.+..       +-.+++++++|.+|..
T Consensus       175 ~~~---~~~~~~--------~D~~~~~~~~~~~------~~ii~l~sPnNPtG~l~~-------~v~~~~~~I~DEaY~~  230 (425)
T d2hoxa1         175 FDK---KGYVWA--------GNAANYVNVSNPE------QYIEMVTSPNNPEGLLRH-------AVIKGCKSIYDMVYYW  230 (425)
T ss_dssp             SCB---TTEEEE--------EEGGGGTTCSCGG------GEEEEEESSCTTTCCCCC-------CSSTTCEEEEECTTCS
T ss_pred             cCC---CCCccC--------CCHHHHHhhCCCC------ceEEEEECCCCCCcchhh-------hhhhCCEEEEeccccC
Confidence            887   544444        4556666655544      358999999999999732       1225899999999954


Q ss_pred             ccccCccchhhhcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCccccc
Q 037144          275 SACICPEFRHFIDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQIT  353 (502)
Q Consensus       275 ~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~  353 (502)
                      ..+. +     +.....-+.+..++.|.++ .....|+++++++....... ....+....                   
T Consensus       231 ~~f~-~-----~~~~~~~~Ivl~S~SK~fglaGlRiGw~i~~~~~i~~~~~-~~~~~~~~~-------------------  284 (425)
T d2hoxa1         231 PHYT-P-----IKYKADEDILLFTMSKFTGHSGSRFGWALIKDESVYNNLL-NYMTKNTEG-------------------  284 (425)
T ss_dssp             TTTS-C-----CCSCBCCSEEEEEHHHHTSCGGGCCEEEEECCHHHHHHHH-HHHHHHTSS-------------------
T ss_pred             cccc-c-----hhhhcCCeEEEEeCHHhccCcchheeeEEeCCHHHHHHHH-HhhccCccc-------------------
Confidence            3221 1     1111234577788999987 55678988888775533221 111111000                   


Q ss_pred             CCCCCCchHHHHHHHH----------hcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeE--------------
Q 037144          354 LCRRFRSLKLWVVIRN----------FGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSL--------------  409 (502)
Q Consensus       354 ~sr~~~al~~~~~l~~----------~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~--------------  409 (502)
                      .+ ....+++..+++.          ...+-+....+...+..+++.+.|.+.+.+.+...|....              
T Consensus       285 vs-~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~~~~~l~~~p~~~~~~f~~~~~~~~~~f  363 (425)
T d2hoxa1         285 TP-RETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPSY  363 (425)
T ss_dssp             CC-HHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEECCCCCSCEEETTTTEEECCCCSE
T ss_pred             CC-HHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeccCCccceeeeeeccCCCcce
Confidence            00 0011222222221          1233455566777778888999999887776543232211              


Q ss_pred             EEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC-CEEEEEEEecCCCCcHHHH
Q 037144          410 VCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG-GIYVLRFAAGNSMTMESHV  488 (502)
Q Consensus       410 v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-g~~~lR~~~~~~~t~~~di  488 (502)
                      ..++....                      +    .+   .+.+.|.+.|+++.++..++ +..++|+++.   ++++++
T Consensus       364 ~wl~~~~~----------------------~----~~---~~~~lL~e~gI~v~pGs~FG~~~~yvRisl~---~~~e~l  411 (425)
T d2hoxa1         364 AWVKCEWE----------------------E----DK---DCYQTFQNGRINTQNGVGFEASSRYVRLSLI---KTQDDF  411 (425)
T ss_dssp             EEEEECSG----------------------G----GC---SHHHHHHHTTEECEEGGGGTSCTTEEEEECS---SCHHHH
T ss_pred             eeeeCCCC----------------------h----HH---HHHHHHHhCCEEEEechhcCCCCCEEEEEec---CCHHHH
Confidence            11111110                      0    11   12334555677666665554 3579999986   467799


Q ss_pred             HHHHHHHHHHHHh
Q 037144          489 RAAWTVVQEHLEA  501 (502)
Q Consensus       489 ~~~~~~l~~~~~~  501 (502)
                      ++++++|+++.++
T Consensus       412 d~~l~rL~~~v~a  424 (425)
T d2hoxa1         412 DQLMYYLKDMVKA  424 (425)
T ss_dssp             HHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHhc
Confidence            9999999998764

>d1sffa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 4-aminobutyrate aminotransferase, GABA-aminotransferase
species: Escherichia coli [TaxId: 562]

Probab=99.37  E-value=2.2e-10  Score=114.75  Aligned_cols=320  Identities=11%  Similarity=0.034  Sum_probs=171.5

Q ss_pred             HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH
Q 037144          115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI  194 (502)
Q Consensus       115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~  194 (502)
                      .+.+.++.+.+.+++.-....      ..+|+++||+|+..|++.||...-        +..+|-.....|-...-+..+
T Consensus        82 ~~~~~~la~~l~~~~p~~~~~------~v~f~~sGseA~e~Alk~ar~~t~--------r~~ii~~~~~yHG~t~~~~~~  147 (425)
T d1sffa_          82 YEPYLELCEIMNQKVPGDFAK------KTLLVTTGSEAVENAVKIARAATK--------RSGTIAFSGAYHGRTHYTLAL  147 (425)
T ss_dssp             CHHHHHHHHHHHHHSSCSSCE------EEEEESSHHHHHHHHHHHHHHHHT--------CCEEEEETTCCCCSSHHHHHH
T ss_pred             CcHHHHHHHHHHhhhhhcccc------eeeeeccccchhhhHHHHhhhhhc--------ccceEeecCCCcCccccchhh
Confidence            345556778888887532211      478899999999999999998631        233444444456544444444


Q ss_pred             cCCC----------CCCEEEEecCC--CCCcccCHH-HHHHHHHHHHhcCCccEEEEEecCCccccccC----ChhHHHH
Q 037144          195 VGID----------RKNIRAIKTTK--SSSYGLSAE-SVLSQINLDVEAELIPLFLCATVGTTAITAVD----PLKPLCD  257 (502)
Q Consensus       195 ~Glg----------~~~v~~v~~~~--~~~~~~d~~-~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id----pl~eI~~  257 (502)
                      .|-.          .......+.+.  .+....... .+++.+.. ......+.+|++.-.....|.+.    -++.|.+
T Consensus       148 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~vaavi~EPi~g~~G~~~~~~~~l~~l~~  226 (425)
T d1sffa_         148 TGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKN-DAAPEDIAAIVIEPVQGEGGFYASSPAFMQRLRA  226 (425)
T ss_dssp             SSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHH-TCCGGGEEEEEECSBCTTTTSCBCCHHHHHHHHH
T ss_pred             cCCCCcccCCcccccCCccccCCccccccccchhhHHHHHHHHHh-cccccceEEEEecCccCCCCcccCCHHHHHHHHH
Confidence            4421          11222222221  011111111 12222221 12222355666654444556653    3889999


Q ss_pred             HHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCC
Q 037144          258 VAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATD  337 (502)
Q Consensus       258 i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~  337 (502)
                      +|++||+.+++|.++.|+......+....-++ ..|.++++  |.++..++.|.++++++-  .+.+..  ....+    
T Consensus       227 lc~~~gillI~DEV~tG~gR~g~~~a~~~~gv-~PDi~~~g--K~l~gG~P~~av~~~~~i--~~~~~~--~~~~~----  295 (425)
T d1sffa_         227 LCDEHGIMLIADEVQSGAGRTGTLFAMEQMGV-APDLTTFA--KSIAGGFPLAGVTGRAEV--MDAVAP--GGLGG----  295 (425)
T ss_dssp             HHHHHTCEEEEECTTTTTTTTSSSSGGGGTTS-CCSEEEEC--GGGGTSSCCEEEEEEHHH--HTTSCT--TSBCC----
T ss_pred             HHHHcCceEEeccccccCCCcchhhHHHhcCC-Cccceecc--cccCCCcceEEEEEcHHH--HHhhCC--CCCCC----
Confidence            99999999999999987544332222222244 68988876  988777889999887652  122211  11100    


Q ss_pred             CCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHH----HhcCCCeEEecCCCeeEEEEE
Q 037144          338 QEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERL----VTSDKRFEVAFPRNFSLVCFR  413 (502)
Q Consensus       338 ~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~----l~~~~~~~l~~~~~~~~v~f~  413 (502)
                                   |+ .+.+....+..++|+.+-++.   ..++...+.+++.+.    +++.|.+.-+. -...++.+.
T Consensus       296 -------------T~-~gnpl~~aaa~a~L~~i~~~~---~~~~~~~~g~~l~~~l~~~~~~~~~v~~vr-g~Gl~~~i~  357 (425)
T d1sffa_         296 -------------TY-AGNPIACVAALEVLKVFEQEN---LLQKANDLGQKLKDGLLAIAEKHPEIGDVR-GLGAMIAIE  357 (425)
T ss_dssp             -------------SS-SSCHHHHHHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHHHTCTTEEEEE-EETTEEEEE
T ss_pred             -------------CC-CcCHHHHHHHHHHHHHHHHhh---hhhhhhhhhhhhhhhhhhhHhhCCceEEEE-ccccEEEEE
Confidence                         11 111112233344444443333   344444555555554    44555332221 112344555


Q ss_pred             eecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHH
Q 037144          414 VTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWT  493 (502)
Q Consensus       414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~  493 (502)
                      +......                    .....++...+.+++.++|.++.....  ....+|++.. ...+++|||++++
T Consensus       358 f~~~~~~--------------------~~~~~~~~~~~~~~l~~~Gvl~~~~g~--~~n~i~~~Pp-L~it~~eid~~l~  414 (425)
T d1sffa_         358 LFEDGDH--------------------NKPDAKLTAEIVARARDKGLILLSCGP--YYNVLRILVP-LTIEDAQIRQGLE  414 (425)
T ss_dssp             EBGGGCT--------------------TSBCHHHHHHHHHHHHHTTEECEEEST--TSCEEEECCC-TTCCHHHHHHHHH
T ss_pred             EeccCcc--------------------CCccHHHHHHHHHHHHHCCCEEeccCC--CCCEEEEECC-CCCCHHHHHHHHH
Confidence            5332100                    000134566788888899975433321  2346898853 4467789999999


Q ss_pred             HHHHHHHh
Q 037144          494 VVQEHLEA  501 (502)
Q Consensus       494 ~l~~~~~~  501 (502)
                      +++++.++
T Consensus       415 ~l~~al~e  422 (425)
T d1sffa_         415 IISQCFDE  422 (425)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99998775

>d2gsaa_ c.67.1.4 (A:) Glutamate-1-semialdehyde aminomutase (aminotransferase) {Synechococcus sp., strain GR6 [TaxId: 1131]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Glutamate-1-semialdehyde aminomutase (aminotransferase)
species: Synechococcus sp., strain GR6 [TaxId: 1131]

Probab=99.34  E-value=1.2e-10  Score=116.60  Aligned_cols=332  Identities=11%  Similarity=-0.010  Sum_probs=173.2

Q ss_pred             HHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHh
Q 037144           89 VAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKI  168 (502)
Q Consensus        89 ~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~  168 (502)
                      .|. +.+.+...++.......  +  ...+..+.+.+.++.+..+        ...|+++|++||..|+..||...    
T Consensus        70 hp~-i~~ai~~~~~~~~~~~~--~--~~~~~~la~~~~~~~~~~~--------~v~f~~sGseA~e~Alk~ar~~t----  132 (427)
T d2gsaa_          70 HPE-VIEALKVAMEKGTSFGA--P--CALENVLAEMVNDAVPSIE--------MVRFVNSGTEACMAVLRLMRAYT----  132 (427)
T ss_dssp             CHH-HHHHHHHHHTTCSCCSS--C--CHHHHHHHHHHHHHSTTCS--------EEEEESSHHHHHHHHHHHHHHHH----
T ss_pred             cHH-HHHHHHHHHHhcCcccc--c--hhHHHHHHHHHHhhCCccc--------cccccCCcHHHHHHHHHHHHHhc----
Confidence            454 34555555554332221  1  2234455666777765432        47899999999999999998753    


Q ss_pred             CccCCCCeEEEe-CCCCchhHHH-------HHHHcCCCC---------CCEEEEecCCCCCcccCHHHHHHHHHHHHhcC
Q 037144          169 GRENISKLVVYS-SDQTHCAFQK-------AAQIVGIDR---------KNIRAIKTTKSSSYGLSAESVLSQINLDVEAE  231 (502)
Q Consensus       169 ~~~~~~~~~v~~-s~~~H~s~~~-------aa~~~Glg~---------~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g  231 (502)
                           .+..|+. ....|-...-       .....++..         .....+|       .-|+++||+.+++.   .
T Consensus       133 -----~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-------~~~~~~le~~~~~~---~  197 (427)
T d2gsaa_         133 -----GRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTP-------YNDLEAVKALFAEN---P  197 (427)
T ss_dssp             -----CCCEEEEETTCCCCSCGGGCSSCCHHHHHTTCCSCSSSCHHHHTTEEEEC-------TTCHHHHHHHHTTS---T
T ss_pred             -----CCCeEEEEecccccCcceeeeecCCcccccCCCCCCCCcccCccceeccC-------cchHHHHHHHHHhC---C
Confidence                 2333443 3444522110       111222211         0222222       34899999998753   2


Q ss_pred             CccEEEEEecCCccccccCC----hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC
Q 037144          232 LIPLFLCATVGTTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL  307 (502)
Q Consensus       232 ~~p~~Vv~t~gtt~~G~idp----l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~  307 (502)
                      ....+|++.......|.+-|    +++|.++|++||++|++|.++.|+ .....+..-.-++ ..|.++++  |.++..+
T Consensus       198 ~~iaavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~-r~g~~~~~~~~gi-~PDi~~~g--K~lggG~  273 (427)
T d2gsaa_         198 GEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVMTGF-RIAYGGVQEKFGV-TPDLTTLG--KIIGGGL  273 (427)
T ss_dssp             TTEEEEEECSSBCSSSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTBTTCHHHHTTC-CCSEEEEC--GGGGTTS
T ss_pred             CCeEEEEEcCCcCCCCCccCCHHHHHHHHHHHHHhceeeeeccccccc-eecccchHHhcCC-CHHHHhhh--hccCCCc
Confidence            23456766665556688877    999999999999999999999775 2222222112234 57998887  6776556


Q ss_pred             cceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHH
Q 037144          308 DCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAK  387 (502)
Q Consensus       308 ~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~  387 (502)
                      ..|.++.+++ .. +.+.....+....                |. .+.+..+.+..++++.+-++.   ..++..++.+
T Consensus       274 p~~a~~~~~~-i~-~~~~~~~~~~~~~----------------T~-~gnpla~AAala~Le~i~~~~---l~~~~~~~g~  331 (427)
T d2gsaa_         274 PVGAYGGKRE-IM-QLVAPAGPMYQAG----------------TL-SGNPLAMTAGIKTLELLRQPG---TYEYLDQITK  331 (427)
T ss_dssp             CCEEEEECHH-HH-TTBTTTSSBCCCC----------------TT-TTCHHHHHHHHHHHHHHTSTT---HHHHHHHHHH
T ss_pred             ceeeeeehHH-HH-HHhcccCCCcCCC----------------CC-CCCchhhHHHHHhhHHhhhhh---HHhhhhHHHH
Confidence            6677766543 22 2232211111100                00 111112223334444444433   3455555566


Q ss_pred             HHHHHHh----cCCC-eEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEE
Q 037144          388 LFERLVT----SDKR-FEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVF  462 (502)
Q Consensus       388 ~l~~~l~----~~~~-~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~  462 (502)
                      +|.+.|+    +.+. ..+..  ..+++++.+..........              ....+ .+...++...+.++|. +
T Consensus       332 ~l~~~L~~l~~~~~~~~~v~~--~ggm~~i~~~~~~v~~~~~--------------~~~~d-~~~~~~~~~~ll~~Gv-~  393 (427)
T d2gsaa_         332 RLSDGLLAIAQETGHAACGGQ--VSGMFGFFFTEGPVHNYED--------------AKKSD-LQKFSRFHRGMLEQGI-Y  393 (427)
T ss_dssp             HHHHHHHHHHHHTTCCCEEEE--ETTEEEEESSSCCCCSHHH--------------HTTSC-HHHHHHHHHHHHHTTE-E
T ss_pred             HHHHHHHHHHhhcCCCcEEcc--cCCeEEEEEeccCCCCHHH--------------hhccc-HHHHHHHHHHHHHCCE-E
Confidence            6665554    3321 11211  1124444432211100000              00001 2234567777888885 3


Q ss_pred             EEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHhC
Q 037144          463 MTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEAF  502 (502)
Q Consensus       463 ~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~~  502 (502)
                      +.+...  .   ++.+ ....+++|||+++++++++.+++
T Consensus       394 l~p~~~--~---~~~~-~l~~Te~dId~~l~al~~al~~L  427 (427)
T d2gsaa_         394 LAPSQF--E---AGFT-SLAHTEEDIDATLAAARTVMSAL  427 (427)
T ss_dssp             CCSSTT--S---CEEC-CTTCCHHHHHHHHHHHHHHHTCC
T ss_pred             ECCCCC--c---ceeC-CCCCCHHHHHHHHHHHHHHHHhC
Confidence            443211  1   1112 34457789999999999998764

>d1z7da1 c.67.1.4 (A:7-410) Ornithine aminotransferase {Plasmodium yoelii yoelii [TaxId: 73239]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Plasmodium yoelii yoelii [TaxId: 73239]

Probab=99.32  E-value=6.1e-10  Score=110.65  Aligned_cols=302  Identities=9%  Similarity=0.009  Sum_probs=159.9

Q ss_pred             HHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEe-CCCCchhHHHHHHHcCCC-
Q 037144          121 VMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYS-SDQTHCAFQKAAQIVGID-  198 (502)
Q Consensus       121 ~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~-s~~~H~s~~~aa~~~Glg-  198 (502)
                      +.+.++++.+.+         ...++.+|++|+..|+..+|....+.... ......+.. ....|..........+.. 
T Consensus        86 ~~~~~~~~~~~~---------~v~~~~sgs~a~~~a~k~ar~~~~~~~~~-~~~~~~~~~~~~~~hg~~~~~~~~~~~~~  155 (404)
T d1z7da1          86 CERYLTNLLGYD---------KVLMMNTGAEANETAYKLCRKWGYEVKKI-PENMAKIVVCKNNFSGRTLGCISASTTKK  155 (404)
T ss_dssp             HHHHHHHHHTCS---------EEEEESSHHHHHHHHHHHHHHHHHHTSCC-CTTCCEEEEETTC----------------
T ss_pred             HHHhhhhccccc---------eeeeeccccchHHHHHHHHHHHHhhcccc-cccccccccccccCCCCcccccccccccc
Confidence            445566666653         46889999999999999999865432111 112222332 333343333232222221 


Q ss_pred             --------CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHHHHHhCCEE
Q 037144          199 --------RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDVAKQFGIWV  266 (502)
Q Consensus       199 --------~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~~~~g~~l  266 (502)
                              ...+..+|.+       +.+.|+.++.+.     ...+|++.-.....|.+-|    +++|.++|++||+.+
T Consensus       156 ~~~~~~~~~~~~~~~~~~-------~~~~l~~~~~~~-----~iAavi~EPi~g~~G~~~~~~~fl~~l~~lc~~~g~ll  223 (404)
T d1z7da1         156 CTSNFGPFAPQFSKVPYD-------DLEALEEELKDP-----NVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLF  223 (404)
T ss_dssp             ----------CEEEECTT-------CHHHHHHHHTST-----TEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEE
T ss_pred             cccCCCCCCccccccccc-------hHHHHHHHhcCC-----CEEEEEEEEEcCCCCCccCCHHHHHHHHHHHHHcCCEE
Confidence                    1123333322       556666665322     2456666655666787766    999999999999999


Q ss_pred             EeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCcccccCccCCCCCccccc
Q 037144          267 HVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEV  345 (502)
Q Consensus       267 hVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~  345 (502)
                      ++|.++.|+......+..-.-++ ..|.++++  |.++.. +..|.+++++.-  .+.+.  +....+            
T Consensus       224 I~DEV~tGfgRtG~~~~~e~~gv-~PDivt~g--K~l~gG~~p~~~v~~~~~i--~~~~~--~~~~~~------------  284 (404)
T d1z7da1         224 VADEVQTGLGRTGKLLCVHHYNV-KPDVILLG--KALSGGHYPISAVLANDDI--MLVIK--PGEHGS------------  284 (404)
T ss_dssp             EEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGGTTSSCCEEEEECHHH--HTTCC--TTCCCC------------
T ss_pred             EEEcCccCCCcccccccccccCC-CCCEEEEc--ccccCCCCCcccccchHHH--HccCC--CCCcCc------------
Confidence            99999976543322222222345 68999877  888654 457777776442  11211  111110            


Q ss_pred             CCCcccccCCCCCCchHHHHHHHHhcHHHHHHHH-HHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhh
Q 037144          346 GYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFI-RSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLR  424 (502)
Q Consensus       346 ~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~-~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~  424 (502)
                           |+ .+.+..+.+..++++.+-.+.+.+.+ +....+.+.+.+.+++.+.+.-+. -...++.+.+.....     
T Consensus       285 -----T~-~gnpl~~aaa~a~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~vr-g~Gl~~~i~~~~~~~-----  352 (404)
T d1z7da1         285 -----TY-GGNPLAASICVEALNVLINEKLCENAEKLGGPFLENLKRELKDSKIVRDVR-GKGLLCAIEFKNELV-----  352 (404)
T ss_dssp             -----TT-TTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEE-EETTEEEEEECTTTC-----
T ss_pred             -----CC-CCCcchhhhhhhhhhhhhcchhhhhhccchhHHHHHHHHHHhcCCCeEEEE-eeCcEEEEEEcCCcc-----
Confidence                 11 11122233444445544444333333 334445555666666665443221 112245555543211     


Q ss_pred             hcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHhC
Q 037144          425 TKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEAF  502 (502)
Q Consensus       425 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~~  502 (502)
                                            .+.++..++.++|.++ .+.   +...+|++. ....++++||++++.|+++.++|
T Consensus       353 ----------------------~~~~~~~~l~~~Gl~~-~~~---~~~~ir~~P-pl~it~~~id~~~~~l~~alk~~  403 (404)
T d1z7da1         353 ----------------------NVLDICLKLKENGLIT-RDV---HDKTIRLTP-PLCITKEQLDECTEIIVKTVKFF  403 (404)
T ss_dssp             ----------------------CHHHHHHHHHHTTEEC-CEE---TTTEEEECC-CTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             ----------------------cHHHHHHHHHhCCeEE-ecC---CCCEEEEEC-CcCCCHHHHHHHHHHHHHHHHhh
Confidence                                  0235667777888643 221   234688875 24457889999999999998764

>d1s0aa_ c.67.1.4 (A:) Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA
species: Escherichia coli [TaxId: 562]

Probab=99.26  E-value=1e-09  Score=109.73  Aligned_cols=310  Identities=9%  Similarity=-0.036  Sum_probs=166.0

Q ss_pred             HHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCC--
Q 037144          120 IVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGI--  197 (502)
Q Consensus       120 ~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Gl--  197 (502)
                      ++.+.+.+....+..       ..+|+.+|++|+..|+..+|.....+..   .++.+|......|-...-+..+.|-  
T Consensus        90 ~l~~~l~~~~~~~~~-------~v~f~~sGseA~e~A~k~ar~~~~~~g~---~~~~ii~~~~~yHG~t~~a~~~t~~~~  159 (429)
T d1s0aa_          90 ELCRKLVAMTPQPLE-------CVFLADSGSVAVEVAMKMALQYWQAKGE---ARQRFLTFRNGYHGDTFGAMSVCDPDN  159 (429)
T ss_dssp             HHHHHHHHHSCTTCC-------EEEEESSHHHHHHHHHHHHHHHHHHHTC---CCCEEEEETTCCCCSSHHHHTTSCTTT
T ss_pred             HHHHHHHhhhccCcc-------eeeeccccccchhhhhhhhhheeecccc---cccEEEEecCCccccchhhhhhcCCcc
Confidence            344566666655433       5789999999999999999976543311   1223444444456555444444332  


Q ss_pred             --------CCCCEEEEecCCC-CCccc---CHHHHHHHHHHHHhcCCccEEEEEecC-CccccccC--C--hhHHHHHHH
Q 037144          198 --------DRKNIRAIKTTKS-SSYGL---SAESVLSQINLDVEAELIPLFLCATVG-TTAITAVD--P--LKPLCDVAK  260 (502)
Q Consensus       198 --------g~~~v~~v~~~~~-~~~~~---d~~~Le~~i~~~~~~g~~p~~Vv~t~g-tt~~G~id--p--l~eI~~i~~  260 (502)
                              ........|.... .....   +++.+++.+.+   .+..+.+|++.-. .+..|.+.  |  +++|.++|+
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~iaavivEPi~~~~gg~~~~~~~fl~~lr~lc~  236 (429)
T d1s0aa_         160 SMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAA---HRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICD  236 (429)
T ss_dssp             TTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHH---HTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHH
T ss_pred             ccccccCccccccccccccccccccccchhhhhhhhhhhhh---cCCccceeeecceeccCCCccCCCHHHHHHHHHHHH
Confidence                    1112333333211 11122   44555554443   2334555555532 23333432  2  899999999


Q ss_pred             HhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcC-CcccccCccCCC
Q 037144          261 QFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLST-NPQYLKNEATDQ  338 (502)
Q Consensus       261 ~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~  338 (502)
                      +||+.+++|..+.|+.....-+.....++ ..|.++++  |.++.. ...|+++++++- . +.+.. ...-+...    
T Consensus       237 ~~gillI~DEV~tGfGRtG~~~~~~~~~v-~PDi~~~g--K~l~gG~~p~~av~~~~~i-~-~~~~~~~~~~~~~~----  307 (429)
T d1s0aa_         237 REGILLIADEIATGFGRTGKLFACEHAEI-APDILCLG--KALTGGTMTLSATLTTREV-A-ETISNGEAGCFMHG----  307 (429)
T ss_dssp             HHTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGGTSSSCCEEEEECHHH-H-HHHHTSTTSSCSCC----
T ss_pred             HcCcceehhhcccccccccccccccccee-cccccccc--cccccccccccchhhHHHH-H-hccCCCCCcceeec----
Confidence            99999999999987644333222222234 57888877  777443 457777766442 2 22211 11111100    


Q ss_pred             CCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCeEEecCCCeeEEEEEee
Q 037144          339 EPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD---KRFEVAFPRNFSLVCFRVT  415 (502)
Q Consensus       339 ~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~---~~~~l~~~~~~~~v~f~~~  415 (502)
                                     .+-...++.+.+++..+..-.-.+..++..++.++|+++|+++   +.+.=+. -...+..+.+.
T Consensus       308 ---------------~T~~gnp~~~aaa~a~L~~i~~~~~~~~~~~~g~~l~~~L~~l~~~~~v~~vr-g~Gl~~~~e~~  371 (429)
T d1s0aa_         308 ---------------PTFMGNPLACAAANASLAILESGDWQQQVADIEVQLREQLAPARDAEMVADVR-VLGAIGVVETT  371 (429)
T ss_dssp             ---------------CTTTTCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHGGGGGCTTEEEEE-EETTEEEEEES
T ss_pred             ---------------CCCCCCcccchhhhccccccccccccchhhHHHHHHHHHHHHhccCCceEEEe-ecccEEEEEec
Confidence                           0011133444444443321111345677777888898888654   2221010 01124445543


Q ss_pred             cCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHH
Q 037144          416 PSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVV  495 (502)
Q Consensus       416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l  495 (502)
                      .+.                            ...++.+.+.++|.+. .+   .+ ..+|++.. ...+++|||++++.|
T Consensus       372 ~~~----------------------------~~~~~~~~~~~~Gl~~-~~---~g-~~i~~~Pp-l~it~~eid~~~~~l  417 (429)
T d1s0aa_         372 HPV----------------------------NMAALQKFFVEQGVWI-RP---FG-KLIYLMPP-YIILPQQLQRLTAAV  417 (429)
T ss_dssp             SCB----------------------------CHHHHHHHHHHTTEEC-CC---BT-TEEEECCC-TTCCHHHHHHHHHHH
T ss_pred             Ccc----------------------------cHHHHHHHHHHCCcEE-Ee---cC-CEEEEeCC-cCCCHHHHHHHHHHH
Confidence            321                            0235677777788643 22   12 37898742 446888999999999


Q ss_pred             HHHHHh
Q 037144          496 QEHLEA  501 (502)
Q Consensus       496 ~~~~~~  501 (502)
                      ++..++
T Consensus       418 ~~al~e  423 (429)
T d1s0aa_         418 NRAVQD  423 (429)
T ss_dssp             HHHTSS
T ss_pred             HHHHHh
Confidence            988654

>d1zoda1 c.67.1.4 (A:3-433) Dialkylglycine decarboxylase {Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Dialkylglycine decarboxylase
species: Pseudomonas cepacia [TaxId: 292]

Probab=99.24  E-value=8.9e-10  Score=110.46  Aligned_cols=319  Identities=12%  Similarity=-0.002  Sum_probs=162.9

Q ss_pred             HHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCC--
Q 037144          120 IVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGI--  197 (502)
Q Consensus       120 ~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Gl--  197 (502)
                      ++.+.|.++..-.-       ...+|+.+||+|+..|+..||... +       +..++-.....|-...-+....+-  
T Consensus        87 ~la~~L~~~~~~~~-------~~v~f~~sGseA~e~Alk~Ar~~t-~-------r~~i~~~~~~yHG~t~~~~~~~~~~~  151 (431)
T d1zoda1          87 DLATRLANITPPGL-------DRALLLSTGAESNEAAIRMAKLVT-G-------KYEIVGFAQSWHGMTGAAASATYSAG  151 (431)
T ss_dssp             HHHHHHHHHSCTTC-------CEEEEESCHHHHHHHHHHHHHHHH-T-------CCEEEEETTCCCCSSHHHHHTCCSSC
T ss_pred             HHHHHHHHhCCccc-------ceeeecccccchHHHHHHHHHHhc-C-------Ccceeecccccccccchhhccccccc
Confidence            46677777763211       157999999999999999998763 1       233344444455444434333221  


Q ss_pred             ------CCCCEEEEecCCCC-------CcccCHHHHHHHHHHHHh-cCCccEEEEEecCCccccccCC----hhHHHHHH
Q 037144          198 ------DRKNIRAIKTTKSS-------SYGLSAESVLSQINLDVE-AELIPLFLCATVGTTAITAVDP----LKPLCDVA  259 (502)
Q Consensus       198 ------g~~~v~~v~~~~~~-------~~~~d~~~Le~~i~~~~~-~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~  259 (502)
                            .......++.....       ....+.+.++.......+ ....+.+|++.-.....|.+-|    +++|.++|
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~EPi~g~~G~~~~~~~yl~~lr~lc  231 (431)
T d1zoda1         152 RKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKC  231 (431)
T ss_dssp             CSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHHCCSCEEEEEECSEETTTTCEECCTTHHHHHHHHH
T ss_pred             ccccCCcccCceeeeeecccccccccccchhhhhhHHHHHHHHHHhccccccceeeccccccCCccCCCHHHHHHHHHHH
Confidence                  11133444332110       011233444444332221 2234556666554444566644    99999999


Q ss_pred             HHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCC
Q 037144          260 KQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQE  339 (502)
Q Consensus       260 ~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~  339 (502)
                      ++||+.|++|..+.|+......+.....++ ..|.++++  |.++..+..+.++++++.. .......  +....     
T Consensus       232 ~~~gillI~DEV~tG~gRtG~~~~~~~~gv-~PDi~~~g--K~l~gG~p~~av~~~~~~~-~~~~~~~--~~~~~-----  300 (431)
T d1zoda1         232 EARGMLLILDEAQTGVGRTGTMFACQRDGV-TPDILTLS--KTLGAGLPLAAIVTSAAIE-ERAHELG--YLFYT-----  300 (431)
T ss_dssp             HHHTCEEEEECTTTTTTTTSSSSTHHHHTC-CCSEEEEC--HHHHTTSSCEEEEECHHHH-HHHHHTT--CCCCC-----
T ss_pred             HhcCceEEeccccccccccccccccccCCC-Ccchhccc--cccccccccceeeeeecch-hhhhccc--ccccC-----
Confidence            999999999999987543332222222344 68999987  8776666677777654422 1111100  11000     


Q ss_pred             CcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHH----HhcCCCeEEecCCCeeEEEEEee
Q 037144          340 PKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERL----VTSDKRFEVAFPRNFSLVCFRVT  415 (502)
Q Consensus       340 ~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~----l~~~~~~~l~~~~~~~~v~f~~~  415 (502)
                                 |. .+.+..+.+..+++..+..+.   ..++..++.+++.+.    +.+.|-+.-+. -...++.+.+.
T Consensus       301 -----------T~-~g~pl~~aaa~a~l~~i~~~~---~~~~~~~~g~~l~~~l~~~~~~~~~i~~vr-G~Glm~~ie~~  364 (431)
T d1zoda1         301 -----------TH-VSDPLPAAVGLRVLDVVQRDG---LVARANVMGDRLRRGLLDLMERFDCIGDVR-GRGLLLGVEIV  364 (431)
T ss_dssp             -----------TT-TTCHHHHHHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHHHHCTTEEEEE-EETTEEEEEEE
T ss_pred             -----------CC-CCCcchHHHHHHHHHHhhhhh---hhHHHHHHHHHHhhhhhhhhhcCCCeEEEe-ecceEEEEEEe
Confidence                       00 111112223334444443333   344444444444444    44444322110 01123444442


Q ss_pred             cCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHH
Q 037144          416 PSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVV  495 (502)
Q Consensus       416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l  495 (502)
                      ....                    ..+..+....++.+.+.+.|...-.........+||++.. ...+++|||+++++|
T Consensus       365 ~~~~--------------------~~~~~~~~~~~i~~~~~~~Gl~~~~~~~~~~~~~i~l~Pp-l~it~~eid~~~~~l  423 (431)
T d1zoda1         365 KDRR--------------------TKEPADGLGAKITRECMNLGLSMNIVQLPGMGGVFRIAPP-LTVSEDEIDLGLSLL  423 (431)
T ss_dssp             EETT--------------------TTEECTTHHHHHHHHHHHTTEECCEECCTTSCCEEEECCC-TTCCHHHHHHHHHHH
T ss_pred             cCCc--------------------ccCccHHHHHHHHHHHHHhCcccCeeeecCCCCEEEEECC-CCCCHHHHHHHHHHH
Confidence            2100                    0000123355677788888853100011123457998853 446778999999999


Q ss_pred             HHHHHh
Q 037144          496 QEHLEA  501 (502)
Q Consensus       496 ~~~~~~  501 (502)
                      .+..++
T Consensus       424 ~~al~~  429 (431)
T d1zoda1         424 GQAIER  429 (431)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            988765

>d1ohwa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 4-aminobutyrate aminotransferase, GABA-aminotransferase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.18  E-value=3.1e-09  Score=107.18  Aligned_cols=294  Identities=12%  Similarity=0.065  Sum_probs=162.2

Q ss_pred             cEEEcCCchHHHHHHHHHHHHHHHHHh-C----------------ccCCCCeEEE-eCCCCchhHHHHHHHcCCC-----
Q 037144          142 GGVIQGTTCEALLCTLTAARDRVLKKI-G----------------RENISKLVVY-SSDQTHCAFQKAAQIVGID-----  198 (502)
Q Consensus       142 ~g~~t~ggt~a~~~al~~a~~~~~~~~-~----------------~~~~~~~~v~-~s~~~H~s~~~aa~~~Glg-----  198 (502)
                      ..+|+.+|++|+..|+..||.....+. +                ..+.++..|+ .....|-...-+..+.|-.     
T Consensus       119 ~v~f~~sGseAve~Aik~Ar~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~~~~syHG~t~~a~s~tg~~~~~~~  198 (461)
T d1ohwa_         119 QLITMACGSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKI  198 (461)
T ss_dssp             EEEEESSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHTCCSCHHHHT
T ss_pred             eeeeecchhhhhHHHHHHHHHHhhhcccCcccccchhhhhhhhccccCCCCceEEEecCCcCCCCcccccccCCcccccc
Confidence            589999999999999999987543221 0                1112333444 4455565554444444320     


Q ss_pred             ---CCCEEEEecCCC-CC-----------cccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHHH
Q 037144          199 ---RKNIRAIKTTKS-SS-----------YGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDVA  259 (502)
Q Consensus       199 ---~~~v~~v~~~~~-~~-----------~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~  259 (502)
                         .......|.... ..           ...+.+++++.+......+..+.+|++.......|.+-|    +++|.++|
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPi~g~~G~~~~~~~fl~~lr~lc  278 (461)
T d1ohwa_         199 DIPSFDWPIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDIS  278 (461)
T ss_dssp             TCCCCCCCEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHH
T ss_pred             cccccCCcccccccccccccccccccchhhhhhHHHHHHHHHHHHhCCCccceeeeccccccccccCchhhHHHHHHHHH
Confidence               001111221110 00           012456777777665555555667777665555666643    89999999


Q ss_pred             HHhCCEEEeecccccccccCccchhhhcCCC-CCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCC
Q 037144          260 KQFGIWVHVDAAYAGSACICPEFRHFIDGVE-CVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQ  338 (502)
Q Consensus       260 ~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~-~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~  338 (502)
                      ++||+.|++|.++.|+.....-+.....+++ ..|.++++  |.++    .|.+....      .+.....+....    
T Consensus       279 ~~~gillI~DEV~tG~gRtG~~~~~e~~gi~~~PDiv~~g--K~l~----~g~~~~~~------~~~~~~~~~~~~----  342 (461)
T d1ohwa_         279 RKHGCAFLVDEVQTGGGSTGKFWAHEHWGLDDPADVMTFS--KKMM----TGGFFHKE------EFRPNAPYRIFN----  342 (461)
T ss_dssp             HHTTCEEEEECTTTCSSTTSSSSGGGGGCCSSCCSEEEEC--GGGS----SEEEEECG------GGSCSSTTSSCC----
T ss_pred             HhhCcceeccccccccccccccccccccccccCchhhhhh--hccc----cccccccc------cccccccccccc----
Confidence            9999999999999776433222222222443 47889876  7664    34444321      111111111000    


Q ss_pred             CCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCC-e-EEecCCCeeEEEE
Q 037144          339 EPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTS----DKR-F-EVAFPRNFSLVCF  412 (502)
Q Consensus       339 ~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~----~~~-~-~l~~~~~~~~v~f  412 (502)
                                  |. .+.+..+.+..++++.+.++   +++++..++.++|.++|++    .|. + ++-+  ...++.+
T Consensus       343 ------------T~-~g~p~~~aaa~a~l~~i~~~---~l~~~~~~~g~~l~~~l~~l~~~~~~~i~~vrG--~Gl~~~i  404 (461)
T d1ohwa_         343 ------------TW-LGDPSKNLLLAEVINIIKRE---DLLSNAAHAGKVLLTGLLDLQARYPQFISRVRG--RGTFCSF  404 (461)
T ss_dssp             ------------SC-SSCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHHHCTTTCEEEEE--ETTEEEE
T ss_pred             ------------cc-ccccccchhhcccchhhhhh---hHHHHHHHHHHHHHHHHHHHHhhCCCceEEeee--eeEEEEE
Confidence                        10 11112223334445544333   3455666666777776654    332 1 1111  1124455


Q ss_pred             EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHH
Q 037144          413 RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAW  492 (502)
Q Consensus       413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~  492 (502)
                      .+..                            .+...++.+.+.++|.++ .+.   +...||+.. ....+++|||.++
T Consensus       405 e~~~----------------------------~~~~~~i~~~~~~~Gll~-~~~---~~~~ir~~P-pL~it~~eid~~~  451 (461)
T d1ohwa_         405 DTPD----------------------------ESIRNKLISIARNKGVML-GGC---GDKSIRFRP-TLVFRDHHAHLFL  451 (461)
T ss_dssp             ECSS----------------------------HHHHHHHHHHHHHTTEEC-EEE---TTTEEECCC-CTTCCHHHHHHHH
T ss_pred             EcCC----------------------------HHHHHHHHHHHHHCCeEE-eeC---CCCEEEEeC-CcCCCHHHHHHHH
Confidence            4432                            334567888888889643 222   235789874 3456888999999


Q ss_pred             HHHHHHHHhC
Q 037144          493 TVVQEHLEAF  502 (502)
Q Consensus       493 ~~l~~~~~~~  502 (502)
                      +.|.+++++|
T Consensus       452 ~~l~~~l~ef  461 (461)
T d1ohwa_         452 NIFSDILADF  461 (461)
T ss_dssp             HHHHHHHHTC
T ss_pred             HHHHHHHhcC
Confidence            9999998876