Citrus Sinensis ID: 038044

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200---
Protein Sequence
MGALPLHSSLLILERDVFESSYIRLAVSANQKWKNEPSTSGQTSKIGSKSACFLGKSFLMRRHGWKIAFALDTGGISGSGGQESLNGDGPDLGGTRLGRIVSAGGRQLLEKLNIARKNLPMKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEGIGMLMYKKPPSSTGRLQSFVVMMNYWKAGVCLGLFVDAFKLGS
Secondary Structure (PSIPRED)
ccccccccccccccccccccEEEEEEEEccccccccccccccccccccccccccccccccccccccEEEEEccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
ccccEcccccEEcccccccccEEEEEEHHHccccccccccccHHHccccccccccccccccccccEEEEEEccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
mgalplhssllILERDVFESSYIRLAVSAnqkwknepstsgqtskigsksacflgksflmrrHGWKIAFAldtggisgsggqeslngdgpdlggtrlGRIVSAGGRQLLEKLNIARKNLPMKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEGIGMlmykkppsstgrlQSFVVMMNYWKAGVCLGLFVDAFKLGS
Flexible Loop (DISEMBL)
mgalplhssLLILERDVFESSYIRLAVsanqkwknepstsgqtskigskSACFLGKSFLMRRHGWKIAFALDTGGISGSGGQESLNGDGPDLGGTRLGRIVSAGGRQLLEKLNIARKNLPMKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEGIGMLMYKKPPSSTGRLQSFVVMMNYWKAGVCLGLFVDAFKLGS
Low Complexity Region (SEG)
MGALPLHSSLLILERDVFESSYIRLAVSANQKWKNEPSTSGQTSKIGSKSACFLGKSFLMRRHGWKIAFALDTGGISGSGGQESLNGDGPDLGGTRLGRIVSAGGRQLLEKLNIARKNLPMKIFLLLLGFYTANALATILGQTGDWDvlvagvvvaaIEGIGMLMYKKPPSSTGRLQSFVVMMNYWKAGVCLGLFVDAFKLGS
Disordered region (IsUnstruct)
********SLLILERDVFESSYIRLAVSA********************SACFLGKSFLMRRHGWKIAFALDTGGI******************TRLGRIVSAGGRQLLEKLNIARKNLPMKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEGIGMLMYKKPPSSTGRLQSFVVMMNYWKAGVCLGLFVDAFK***
Disordered Region (DISOPRED)
****************VFESSYIRLAVSANQKWKNEPSTSGQTSKIGS*SACF********************************************GRIVSAGGRQLLEKLNIARKNLPMKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEGIGMLMYKKPPSSTGRLQSFVVMMNYWKAGVCLGLFVDAFKLGS
Disordered Region (DISEMBL)
MGALPLHSSLLILERDVFESSYIRLAVSAN****************GSKSACFLGKSFLMRRHGWKIAFALDTGGISGSGGQESLNGDGPDLGGTRLGRIVSAGGRQLLEKLNIARKNLPMKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEGIGMLMYKKPPSSTGRLQSFVVMMNYWKAGVCLGLFVDAFKLGS
Disordered Region (DISPRO)
*****LHSSLLILERDVFESSYIRLAVSANQKWKNEPSTSGQTSKIGSKSACFLGKSFLMRRHGWKIAFALDTG*****************LGGTRLGRIVSAGGRQLLEKLNIARKNLPMKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEGIGMLMYKKPPSSTGRLQSFVVMMNYWKAGVCLGLFVDAFKLGS
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHi
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGALPLHSSLLILERDVFESSYIRLAVSANQKWKNEPSTSGQTSKIGSKSACFLGKSFLMRRHGWKIAFALDTGGISGSGGQESLNGDGPDLGGTRLGRIVSAGGRQLLEKLNIARKNLPMKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEGIGMLMYKKPPSSTGRLQSFVVMMNYWKAGVCLGLFVDAFKLGS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	203	2.2.26 [Sep-21-2011]
O80813	197	Ycf20-like protein OS=Ara	yes	no	0.798	0.822	0.728	5e-58
Q9MUL5	116	Uncharacterized protein y	N/A	no	0.551	0.965	0.491	1e-17
Q1XDS2	108	Uncharacterized protein y	N/A	no	0.517	0.972	0.403	2e-12
P51214	108	Uncharacterized protein y	N/A	no	0.517	0.972	0.385	3e-12
P72983	109	Ycf20-like protein OS=Syn	N/A	no	0.522	0.972	0.348	9e-10
Q9MVP1	101	Uncharacterized protein y	N/A	no	0.394	0.792	0.362	2e-08
P48409	83	Uncharacterized protein y	N/A	no	0.369	0.903	0.376	1e-07
O78445	64	Uncharacterized protein y	yes	no	0.241	0.765	0.489	4e-06
P34813	100	Uncharacterized protein y	N/A	no	0.453	0.92	0.323	8e-06

>sp|O80813|YC20L_ARATH Ycf20-like protein OS=Arabidopsis thaliana GN=At1g65420 PE=2 SV=2

 Score =  223 bits (569), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 121/166 (72%), Positives = 133/166 (80%), Gaps = 4/166 (2%)

Query: 42  QTSKIGSKSACFLGKSFLMRRHGWKIAFALDTGG-ISGSGGQ-ESLNGDGPDLGGTRLGR 99
           + S I   S  +  KSF +RR   KIAFALDTG  I G  G+ + +NGD   LG TRLGR
Sbjct: 32  KASSITLTSFPYPMKSFQIRRPNRKIAFALDTGSSIPGDSGEGQEMNGDRTGLGSTRLGR 91

Query: 100 IVSAGGRQLLEKLNIARKNLPMKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIE 159
           I  AGG+QLL K+N ARKN PMKIFLLLLGFYTANALATILGQTGDWDVLVAG+VVAAIE
Sbjct: 92  IAIAGGKQLLGKINSARKNFPMKIFLLLLGFYTANALATILGQTGDWDVLVAGIVVAAIE 151

Query: 160 GIGMLMYKKPPSS--TGRLQSFVVMMNYWKAGVCLGLFVDAFKLGS 203
           GIGMLMYKKP SS  +G+LQSFVV MN+WKAGVCLGLFVDAFKLGS
Sbjct: 152 GIGMLMYKKPSSSMFSGKLQSFVVFMNFWKAGVCLGLFVDAFKLGS 197

Arabidopsis thaliana (taxid: 3702)

>sp|Q9MUL5|YCF20_MESVI Uncharacterized protein ycf20 OS=Mesostigma viride GN=ycf20 PE=3 SV=1

 Score = 89.7 bits (221), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/116 (49%), Positives = 73/116 (62%), Gaps = 4/116 (3%)

Query: 92  LGGTRLGRIVSAGGRQLLEKLNIARKNLPMKIFLLLLGFYTANALATILGQTGDWDVLVA 151
           +  TRL    +   + L  K+     N P+KI LLLLGF+ A  LAT+ GQTGDWDVLVA
Sbjct: 1   MSNTRLTLFFTNIFQLLDSKIQNYSINFPIKILLLLLGFFIATVLATVFGQTGDWDVLVA 60

Query: 152 GVVVAAIEGIGMLMYKKPPSSTGRL--QSFVVM--MNYWKAGVCLGLFVDAFKLGS 203
           G++VA IE +G  MY K   S  ++   SF+ +  +NY K G+  GLFVDAFKLGS
Sbjct: 61  GILVAMIEILGNKMYSKKYISKKQVFDISFLSLIGINYIKIGLIFGLFVDAFKLGS 116

Mesostigma viride (taxid: 41882)

>sp|Q1XDS2|YCF20_PORYE Uncharacterized protein ycf20 OS=Porphyra yezoensis GN=ycf20 PE=3 SV=1

 Score = 72.4 bits (176), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/109 (40%), Positives = 62/109 (56%), Gaps = 4/109 (3%)

Query: 95  TRLGRIVSAGGRQLLEKLNIARKNLPMKIFLLLLGFYTANALATILGQTGDWDVLVAGVV 154
           TRL    +   + L  KL  +   L   +  LLLGF+ +  L+TI GQTGDW ++ A ++
Sbjct: 4   TRLSTFFAYLIKNLNNKLYYSLSELTTGLISLLLGFFISTGLSTIPGQTGDWGIIAASLI 63

Query: 155 VAAIEGIGMLMYKKPPSSTGRLQSFVVMMNYWKAGVCLGLFVDAFKLGS 203
           VAA E    ++Y    SS  +L   + + N +K G+  GLFVDAFKLGS
Sbjct: 64  VAATELTSKIVY----SSHKQLNIKINLFNNFKIGITYGLFVDAFKLGS 108

Porphyra yezoensis (taxid: 2788)

>sp|P51214|YCF20_PORPU Uncharacterized protein ycf20 OS=Porphyra purpurea GN=ycf20 PE=3 SV=1

 Score = 71.6 bits (174), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 42/109 (38%), Positives = 61/109 (55%), Gaps = 4/109 (3%)

Query: 95  TRLGRIVSAGGRQLLEKLNIARKNLPMKIFLLLLGFYTANALATILGQTGDWDVLVAGVV 154
           T+L    S   + L  +L  +   L   +  LLLGF+ +  L+TI GQTGDW ++ A ++
Sbjct: 4   TKLSIFFSYFVQNLSSRLYYSLNELTAGLISLLLGFFISTGLSTIPGQTGDWGIIAASLI 63

Query: 155 VAAIEGIGMLMYKKPPSSTGRLQSFVVMMNYWKAGVCLGLFVDAFKLGS 203
           VAAIE +  ++Y        R+     ++N  K G+  GLFVDAFKLGS
Sbjct: 64  VAAIELVSKIVYSNKKKYGVRIN----LLNNLKIGITYGLFVDAFKLGS 108

Porphyra purpurea (taxid: 2787)

>sp|P72983|YC20L_SYNY3 Ycf20-like protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll1509 PE=3 SV=1

 Score = 63.5 bits (153), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 3/109 (2%)

Query: 95  TRLGRIVSAGGRQLLEKLNIARKNLPMKIFLLLLGFYTANALATILGQTGDWDVLVAGVV 154
           TRL  IV   G+QL +      + + + +   L GF+   A+AT  GQ   WDV+ A  +
Sbjct: 4   TRLNTIVEVRGQQLSQFFRNPWRRISLSLLSFLFGFFVGTAVATTAGQNSQWDVVCAAFI 63

Query: 155 VAAIEGIGMLMYKKPPSSTGRLQSFVVMMNYWKAGVCLGLFVDAFKLGS 203
           +   E +    Y++     G LQ+ V  +N +K GV   LF++AFKLGS
Sbjct: 64  LLFCELVNRWFYRRGV-KMGDLQAEV--LNIFKMGVSYSLFLEAFKLGS 109

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)

>sp|Q9MVP1|YCF20_CYACA Uncharacterized protein ycf20 OS=Cyanidium caldarium GN=ycf20 PE=3 SV=1

 Score = 59.3 bits (142), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 47/80 (58%)

Query: 124 FLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEGIGMLMYKKPPSSTGRLQSFVVMM 183
           F+ L GF+ ++A +TIL QT +W +L A ++++ +E    L +K   +      +    +
Sbjct: 22  FIFLFGFFLSSATSTILIQTNEWSILTAAILISIVELFNYLKHKFQFNDRKSGYNCFFFI 81

Query: 184 NYWKAGVCLGLFVDAFKLGS 203
           N  K G+  GLF+DAFKLGS
Sbjct: 82  NLAKLGLLYGLFIDAFKLGS 101

Cyanidium caldarium (taxid: 2771)

>sp|P48409|YCF20_GALSU Uncharacterized protein ycf20 OS=Galdieria sulphuraria GN=ycf20 PE=3 SV=1

 Score = 56.6 bits (135), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 2/77 (2%)

Query: 127 LLGFYTANALATILGQTGDWDVLVAGVVVAAIEGIGMLMYKKPPSSTGRLQSFVVMMNYW 186
           LLG +++N L TI  QTGDW + +   ++A  E I  + Y +    T +  + +   N +
Sbjct: 9   LLGIFSSNLLCTIYTQTGDWSLYLTSCIIALYEIISYISYNQFIKKTHK--NIINCFNGF 66

Query: 187 KAGVCLGLFVDAFKLGS 203
           K G+  GL++DAFKLGS
Sbjct: 67  KIGLIYGLYLDAFKLGS 83

Galdieria sulphuraria (taxid: 130081)

>sp|O78445|YCF20_GUITH Uncharacterized protein ycf20 OS=Guillardia theta GN=ycf20 PE=3 SV=1

 Score = 51.2 bits (121), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 31/49 (63%)

Query: 126 LLLGFYTANALATILGQTGDWDVLVAGVVVAAIEGIGMLMYKKPPSSTG 174
           +L GF+ +  L+TIL QTGDW +L A ++VA IE I    YKK P   G
Sbjct: 11  ILFGFFLSTLLSTILSQTGDWSILAASILVATIELINKNKYKKKPLIIG 59

Guillardia theta (taxid: 55529)

>sp|P34813|YCF20_AGLNE Uncharacterized protein ycf20 OS=Aglaothamnion neglectum GN=ycf20 PE=3 SV=1

 Score = 50.4 bits (119), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 7/99 (7%)

Query: 105 GRQLLEKLNIARKNLPMKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEGIGML 164
           G+ L   +N    NL +++  L LG++    + +I  +TGDW ++ A ++V   E +  L
Sbjct: 9   GQYLYYHIN----NLSLQLISLFLGYFFCTIICSIPKETGDWGLITALLIVGINETMSAL 64

Query: 165 MYKKPPSSTGRLQSFVVMMNYWKAGVCLGLFVDAFKLGS 203
           +Y         +   V  +N  K G+  GLFVD+FKLGS
Sbjct: 65  IYSYKKYENNII---VKTINGIKIGIIYGLFVDSFKLGS 100

Aglaothamnion neglectum (taxid: 2765)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	203
224101247	213	predicted protein [Populus trichocarpa]	1.0	0.953	0.736	1e-75
359495755	225	PREDICTED: ycf20-like protein [Vitis vin	1.0	0.902	0.756	4e-73
255547482	201	conserved hypothetical protein [Ricinus	0.975	0.985	0.758	2e-70
351725487	208	uncharacterized protein LOC100499897 [Gl	1.0	0.975	0.666	1e-62
388511147	201	unknown [Medicago truncatula]	0.965	0.975	0.666	2e-61
359807488	207	uncharacterized protein LOC100814758 [Gl	0.995	0.975	0.671	3e-60
21593789	197	antigen receptor, putative [Arabidopsis	0.798	0.822	0.728	1e-56
357476287	209	Ycf20-like protein [Medicago truncatula]	0.724	0.703	0.810	1e-56
297841047	198	hypothetical protein ARALYDRAFT_894093 [	0.793	0.813	0.732	2e-56
18408276	197	Ycf20-like protein [Arabidopsis thaliana	0.798	0.822	0.728	3e-56

>gi|224101247|ref|XP_002312200.1| predicted protein [Populus trichocarpa] gi|222852020|gb|EEE89567.1| predicted protein [Populus trichocarpa]

 Score =  288 bits (736), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 151/205 (73%), Positives = 165/205 (80%), Gaps = 2/205 (0%)

Query: 1   MGALPLHSSLLILERDVFESSYIRLAVSANQKWKNEPSTSGQTSKIGSKSACFLGKSFLM 60
           +GA  L S L ++  +V E + I +A  A Q   +EPS SGQ SKIG K   F    F +
Sbjct: 9   VGARMLQSGLSVMVNEVSERTCITIATCAMQNRNSEPSFSGQASKIGIKFVPFQKTRFQL 68

Query: 61  RRHGWKIAFALDTGGISGSGGQESLNGDGPD-LGGTRLGRIVSAGGRQLLEKLNIARKNL 119
           RR GW+IAFALDTGG+ G+GGQE++NGD P  LGGTRLGRIVSAGGRQLLEKLN ARKN 
Sbjct: 69  RRQGWRIAFALDTGGLPGNGGQENVNGDSPPGLGGTRLGRIVSAGGRQLLEKLNSARKNF 128

Query: 120 PMKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEGIGMLMYKKPPS-STGRLQS 178
           PMKIFLLLLGFYTANALATILGQTGDWDVLVAG+VVAAIEGIGMLMYKKP S ST RLQ 
Sbjct: 129 PMKIFLLLLGFYTANALATILGQTGDWDVLVAGIVVAAIEGIGMLMYKKPSSLSTRRLQY 188

Query: 179 FVVMMNYWKAGVCLGLFVDAFKLGS 203
           FV MMNYWKAGVCLGLFVDAFKLGS
Sbjct: 189 FVAMMNYWKAGVCLGLFVDAFKLGS 213

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359495755|ref|XP_002267846.2| PREDICTED: ycf20-like protein [Vitis vinifera] gi|298205056|emb|CBI38352.3| unnamed protein product [Vitis vinifera]

 Score =  279 bits (714), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 155/205 (75%), Positives = 167/205 (81%), Gaps = 2/205 (0%)

Query: 1   MGALPLHSSLLILERDVFESSYIRLAVSAN-QKWKNEPSTSGQTSKIGSKSACFLGKSFL 59
           MG + L S+L + E +  + SYI        Q W NEPS SGQ SK+G KSA F  KSF 
Sbjct: 21  MGGIMLQSTLSVPESESSDCSYITFTTCCTIQNWNNEPSFSGQISKLGMKSAPFPRKSFQ 80

Query: 60  MRRHGWKIAFALDTGGISGSGGQESLNGDGPDLGGTRLGRIVSAGGRQLLEKLNIARKNL 119
            RRHGWK AFALDTGGI  +GGQE+LNG+GPDLG TRLGRIVSAGGRQLL KLN ARKN 
Sbjct: 81  TRRHGWKTAFALDTGGIPDNGGQENLNGNGPDLGQTRLGRIVSAGGRQLLAKLNSARKNF 140

Query: 120 PMKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEGIGMLMYKKPPS-STGRLQS 178
           PMK+FLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEGIGML+YKK  S STGRLQS
Sbjct: 141 PMKVFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEGIGMLVYKKSSSQSTGRLQS 200

Query: 179 FVVMMNYWKAGVCLGLFVDAFKLGS 203
            VVM+NYWKAGVCLGLFVDAFKLGS
Sbjct: 201 LVVMINYWKAGVCLGLFVDAFKLGS 225

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255547482|ref|XP_002514798.1| conserved hypothetical protein [Ricinus communis] gi|223545849|gb|EEF47352.1| conserved hypothetical protein [Ricinus communis]

 Score =  270 bits (691), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 151/199 (75%), Positives = 164/199 (82%), Gaps = 1/199 (0%)

Query: 6   LHSSLLILERDVFESSYIRLAVSANQKWKNEPSTSGQTSKIGSKSACFLGKSFLMRRHGW 65
           L SS+ ++E +V E S I L + A Q W  EP+ S Q  KIG KSA FL K F +    W
Sbjct: 3   LQSSVSVMEGEVSERSCITLTICAMQNWSVEPTFSRQIPKIGLKSASFLRKRFKLSGQDW 62

Query: 66  KIAFALDTGGISGSGGQESLNGDGPDLGGTRLGRIVSAGGRQLLEKLNIARKNLPMKIFL 125
           +I FALDTGGISG+GG+E+L+GD   LG TRLGRIVSAGGRQLL+KLN ARKN PMKIFL
Sbjct: 63  RIPFALDTGGISGNGGEENLDGDSSGLGSTRLGRIVSAGGRQLLQKLNSARKNFPMKIFL 122

Query: 126 LLLGFYTANALATILGQTGDWDVLVAGVVVAAIEGIGMLMYKKPPS-STGRLQSFVVMMN 184
           LLLGFYTANALATILGQTGDWDVLVAGVVVAAIEGIGMLMYKKP S STGRLQSFVVMMN
Sbjct: 123 LLLGFYTANALATILGQTGDWDVLVAGVVVAAIEGIGMLMYKKPTSPSTGRLQSFVVMMN 182

Query: 185 YWKAGVCLGLFVDAFKLGS 203
           YWKAGVCLGLFVDAFKLGS
Sbjct: 183 YWKAGVCLGLFVDAFKLGS 201

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351725487|ref|NP_001237606.1| uncharacterized protein LOC100499897 [Glycine max] gi|255627495|gb|ACU14092.1| unknown [Glycine max]

 Score =  244 bits (624), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 136/204 (66%), Positives = 161/204 (78%), Gaps = 1/204 (0%)

Query: 1   MGALPLHSSLLILERDVFESSYIRLAVSANQKWKNEPSTSGQTSKIGSKSACFLGKSFLM 60
           MG + L+  L I E +  E S + LA S       EP+ +G T K   KS+ F    FL 
Sbjct: 5   MGTMTLNWRLSITENESSEKSCVNLATSRIHSCCREPNFNGLTLKACMKSSPFAQSCFLG 64

Query: 61  RRHGWKIAFALDTGGISGSGGQESLNGDGPDLGGTRLGRIVSAGGRQLLEKLNIARKNLP 120
           RR GWKIAFAL+TGG+SG+G Q+S N    +LGGTRLGRI++AGGRQLLEKLN ARKN+P
Sbjct: 65  RRAGWKIAFALNTGGVSGNGDQQSFNEASSNLGGTRLGRILTAGGRQLLEKLNSARKNIP 124

Query: 121 MKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEGIGMLMYKK-PPSSTGRLQSF 179
           +K+FLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEGIGML+Y+K P + TGRLQSF
Sbjct: 125 LKVFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEGIGMLIYRKLPTARTGRLQSF 184

Query: 180 VVMMNYWKAGVCLGLFVDAFKLGS 203
           +V+++YWKAG+CLGLFVDAFKLGS
Sbjct: 185 LVLVDYWKAGICLGLFVDAFKLGS 208

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388511147|gb|AFK43635.1| unknown [Medicago truncatula]

 Score =  240 bits (613), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 136/204 (66%), Positives = 157/204 (76%), Gaps = 8/204 (3%)

Query: 1   MGALPLHSSLLILERDVFESSYIRLAVSANQKWKNEPSTSGQTSKIGSKSACFLGKSFLM 60
           MG++ L S L I E +  + S+I            +P  S  T  +G K   FL   FL 
Sbjct: 5   MGSMNLPSKLSITENEGSKRSFIHSCCC-------QPRFSALTPNVGMKPLPFLQSRFLR 57

Query: 61  RRHGWKIAFALDTGGISGSGGQESLNGDGPDLGGTRLGRIVSAGGRQLLEKLNIARKNLP 120
           RR GW +AFAL+T G+SG+G Q+SLN  G  LGGTRLGRI+SAGGRQLL+KLN ARKN P
Sbjct: 58  RRPGWTVAFALNTDGLSGNGEQQSLNDSGSSLGGTRLGRILSAGGRQLLDKLNSARKNFP 117

Query: 121 MKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEGIGMLMYKKPPSS-TGRLQSF 179
            K+FLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEGIGML+YKKPP++ TGRLQSF
Sbjct: 118 TKVFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEGIGMLIYKKPPTTRTGRLQSF 177

Query: 180 VVMMNYWKAGVCLGLFVDAFKLGS 203
           +VM+NYWKAG+CLGLFVDAFKLGS
Sbjct: 178 LVMVNYWKAGICLGLFVDAFKLGS 201

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359807488|ref|NP_001241142.1| uncharacterized protein LOC100814758 [Glycine max] gi|255639749|gb|ACU20168.1| unknown [Glycine max]

 Score =  237 bits (604), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 137/204 (67%), Positives = 160/204 (78%), Gaps = 2/204 (0%)

Query: 1   MGALPLHSSLLILERDVFESSYIRLAVSANQKWKNEPSTSGQTSKIGSKSACFLGKSFLM 60
           MG+  L   L I +    E+S I LA S       E + +  T   G+KS+ F    FL 
Sbjct: 5   MGSTILKWRLSITDYKSSENSCIALATSRIHCCCCETNFNRLTLN-GTKSSPFSQSCFLG 63

Query: 61  RRHGWKIAFALDTGGISGSGGQESLNGDGPDLGGTRLGRIVSAGGRQLLEKLNIARKNLP 120
           RR GWKIAFAL+TGG+SG+G Q+S N    +LGGTRLGRI+SAGGRQLLEKLN ARKN+P
Sbjct: 64  RRAGWKIAFALNTGGVSGNGDQQSFNEASSNLGGTRLGRILSAGGRQLLEKLNAARKNIP 123

Query: 121 MKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEGIGMLMYKKPPSS-TGRLQSF 179
           +K+FLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEGIGML+Y+KPP+  TGRLQSF
Sbjct: 124 LKVFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEGIGMLIYRKPPTEKTGRLQSF 183

Query: 180 VVMMNYWKAGVCLGLFVDAFKLGS 203
           +V++NYWKAG+CLGLFVDAFKLGS
Sbjct: 184 LVLVNYWKAGICLGLFVDAFKLGS 207

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21593789|gb|AAM65756.1| antigen receptor, putative [Arabidopsis thaliana]

 Score =  224 bits (572), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 121/166 (72%), Positives = 133/166 (80%), Gaps = 4/166 (2%)

Query: 42  QTSKIGSKSACFLGKSFLMRRHGWKIAFALDTGG-ISGSGGQ-ESLNGDGPDLGGTRLGR 99
           + S I   S  +  KSF +RR   KIAFALDTG  I G  G+ + +NGD   LG TRLGR
Sbjct: 32  KVSSITLTSFPYPMKSFQIRRPNRKIAFALDTGSSIPGDSGEGQEMNGDRTGLGSTRLGR 91

Query: 100 IVSAGGRQLLEKLNIARKNLPMKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIE 159
           I  AGG+QLL K+N ARKN PMKIFLLLLGFYTANALATILGQTGDWDVLVAG+VVAAIE
Sbjct: 92  IAIAGGKQLLAKINSARKNFPMKIFLLLLGFYTANALATILGQTGDWDVLVAGIVVAAIE 151

Query: 160 GIGMLMYKKPPSS--TGRLQSFVVMMNYWKAGVCLGLFVDAFKLGS 203
           GIGMLMYKKP SS  +G+LQSFVV MN+WKAGVCLGLFVDAFKLGS
Sbjct: 152 GIGMLMYKKPSSSMFSGKLQSFVVFMNFWKAGVCLGLFVDAFKLGS 197

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357476287|ref|XP_003608429.1| Ycf20-like protein [Medicago truncatula] gi|355509484|gb|AES90626.1| Ycf20-like protein [Medicago truncatula]

 Score =  224 bits (572), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 120/148 (81%), Positives = 135/148 (91%), Gaps = 1/148 (0%)

Query: 57  SFLMRRHGWKIAFALDTGGISGSGGQESLNGDGPDLGGTRLGRIVSAGGRQLLEKLNIAR 116
           +FL RR GW +AFAL+T G+SG+G Q+SLN  G  LGGTRLGRI+SAGGRQLL+KLN AR
Sbjct: 62  TFLRRRPGWTVAFALNTDGLSGNGEQQSLNDSGSSLGGTRLGRILSAGGRQLLDKLNSAR 121

Query: 117 KNLPMKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEGIGMLMYKKPPSS-TGR 175
           KN P K+FLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEGIGML+YKKPP++ TGR
Sbjct: 122 KNFPTKVFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEGIGMLIYKKPPTTRTGR 181

Query: 176 LQSFVVMMNYWKAGVCLGLFVDAFKLGS 203
           LQSF+VM+NYWKAG+CLGLFVDAFKLGS
Sbjct: 182 LQSFLVMVNYWKAGICLGLFVDAFKLGS 209

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297841047|ref|XP_002888405.1| hypothetical protein ARALYDRAFT_894093 [Arabidopsis lyrata subsp. lyrata] gi|297334246|gb|EFH64664.1| hypothetical protein ARALYDRAFT_894093 [Arabidopsis lyrata subsp. lyrata]

 Score =  224 bits (571), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 123/168 (73%), Positives = 134/168 (79%), Gaps = 7/168 (4%)

Query: 42  QTSKIGSKSACFLGKSFLMRRHGWKIAFALDTG----GISGSGGQESLNGDGPDLGGTRL 97
           + S I   S  +  KSF +RR   KIAFALDTG    G +G GGQE +NGD   LG TRL
Sbjct: 32  RASSITLTSFPYPMKSFQLRRRNRKIAFALDTGSSIPGDNGGGGQE-MNGDRTGLGSTRL 90

Query: 98  GRIVSAGGRQLLEKLNIARKNLPMKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAA 157
           GRI  AGG+ LL K+N ARKN PMKIFLLLLGFYTANALATILGQTGDWDVLVAG+VVAA
Sbjct: 91  GRIAVAGGKLLLGKINSARKNFPMKIFLLLLGFYTANALATILGQTGDWDVLVAGIVVAA 150

Query: 158 IEGIGMLMYKKPPSS--TGRLQSFVVMMNYWKAGVCLGLFVDAFKLGS 203
           IEGIGMLMYKKP SS  +G+LQSFVV MN+WKAGVCLGLFVDAFKLGS
Sbjct: 151 IEGIGMLMYKKPSSSMFSGKLQSFVVFMNFWKAGVCLGLFVDAFKLGS 198

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18408276|ref|NP_564851.1| Ycf20-like protein [Arabidopsis thaliana] gi|209572697|sp|O80813.2|YC20L_ARATH RecName: Full=Ycf20-like protein gi|107738233|gb|ABF83666.1| At1g65420 [Arabidopsis thaliana] gi|332196250|gb|AEE34371.1| Ycf20-like protein [Arabidopsis thaliana]

 Score =  223 bits (569), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 121/166 (72%), Positives = 133/166 (80%), Gaps = 4/166 (2%)

Query: 42  QTSKIGSKSACFLGKSFLMRRHGWKIAFALDTGG-ISGSGGQ-ESLNGDGPDLGGTRLGR 99
           + S I   S  +  KSF +RR   KIAFALDTG  I G  G+ + +NGD   LG TRLGR
Sbjct: 32  KASSITLTSFPYPMKSFQIRRPNRKIAFALDTGSSIPGDSGEGQEMNGDRTGLGSTRLGR 91

Query: 100 IVSAGGRQLLEKLNIARKNLPMKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIE 159
           I  AGG+QLL K+N ARKN PMKIFLLLLGFYTANALATILGQTGDWDVLVAG+VVAAIE
Sbjct: 92  IAIAGGKQLLGKINSARKNFPMKIFLLLLGFYTANALATILGQTGDWDVLVAGIVVAAIE 151

Query: 160 GIGMLMYKKPPSS--TGRLQSFVVMMNYWKAGVCLGLFVDAFKLGS 203
           GIGMLMYKKP SS  +G+LQSFVV MN+WKAGVCLGLFVDAFKLGS
Sbjct: 152 GIGMLMYKKPSSSMFSGKLQSFVVFMNFWKAGVCLGLFVDAFKLGS 197

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	203
TAIR|locus:2206305	197	NPQ7 "AT1G65420" [Arabidopsis	0.729	0.751	0.717	2.2e-50
TAIR|locus:2103645	230	AT3G56830 "AT3G56830" [Arabido	0.665	0.586	0.380	6.3e-21

TAIR|locus:2206305 NPQ7 "AT1G65420" [Arabidopsis thaliana (taxid:3702)]

 Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
 Identities = 109/152 (71%), Positives = 118/152 (77%)

Query:    56 KSFLMRRHGWKIAFALDTGG-ISGSGGQ-ESLNGDGPDLGGTRLGRIVSAGGRQLLEKLN 113
             KSF +RR   KIAFALDTG  I G  G+ + +NGD   LG TRLGRI  AGG+QLL K+N
Sbjct:    46 KSFQIRRPNRKIAFALDTGSSIPGDSGEGQEMNGDRTGLGSTRLGRIAIAGGKQLLGKIN 105

Query:   114 IARKNLPMKIFLLLLGFYTANALATILGQTGDWDXXXXXXXXXXIEGIGMLMYKKPPSS- 172
              ARKN PMKIFLLLLGFYTANALATILGQTGDWD          IEGIGMLMYKKP SS 
Sbjct:   106 SARKNFPMKIFLLLLGFYTANALATILGQTGDWDVLVAGIVVAAIEGIGMLMYKKPSSSM 165

Query:   173 -TGRLQSFVVMMNYWKAGVCLGLFVDAFKLGS 203
              +G+LQSFVV MN+WKAGVCLGLFVDAFKLGS
Sbjct:   166 FSGKLQSFVVFMNFWKAGVCLGLFVDAFKLGS 197

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0010196 "nonphotochemical quenching" evidence=IMP

TAIR|locus:2103645 AT3G56830 "AT3G56830" [Arabidopsis thaliana (taxid:3702)]

 Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
 Identities = 54/142 (38%), Positives = 75/142 (52%)

Query:    61 RRHGWKIAFALDTGG--ISGSGGQESLNGDGPDLGGTRLGRIVSAGGRQLLEKLNIARKN 118
             RR  W        GG     + G  S N       G RL + +     +LL K+   +K+
Sbjct:    51 RRMSWT-TIKSSVGGDRFDPASGSSSNNSSR----GLRLIKAIQVLRSKLLVKIQEIKKD 105

Query:   119 LPMKIFLLLLGFYTANALATILGQTGDWDXXXXXXXXXXIEGIGMLMYKKPPSSTGRLQS 178
             LP K+F LL+GFY+A A +T +GQTGDWD          +E IG LMY+       +++S
Sbjct:   106 LPKKLFFLLVGFYSATAFSTFIGQTGDWDVLSAGLAVLVVECIGALMYRASIPLINKMRS 165

Query:   179 FVVMMNYWKAGVCLGLFVDAFK 200
              + M NYWK G+ LGLF+D+FK
Sbjct:   166 TITMFNYWKTGLALGLFLDSFK 187


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.138   0.414    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      203       193   0.00098  110 3  11 22  0.46    32
                                                     31  0.43    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  603 (64 KB)
  Total size of DFA:  157 KB (2093 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  16.82u 0.13s 16.95t   Elapsed:  00:00:00
  Total cpu time:  16.82u 0.13s 16.95t   Elapsed:  00:00:00
  Start:  Fri May 10 12:06:11 2013   End:  Fri May 10 12:06:11 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O80813	YC20L_ARATH	No assigned EC number	0.7289	0.7980	0.8223	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	203
pfam04483	60	pfam04483, DUF565, Protein of unknown function (DU	6e-24

>gnl|CDD|218106 pfam04483, DUF565, Protein of unknown function (DUF565)

 Score = 89.2 bits (222), Expect = 6e-24
 Identities = 30/62 (48%), Positives = 39/62 (62%), Gaps = 2/62 (3%)

Query: 142 QTGDWDVLVAGVVVAAIEGIGMLMYKKPPSSTGRLQSFVVMMNYWKAGVCLGLFVDAFKL 201
           QTGDWD+L A ++VA  E I  L Y +P     R    + ++N +K G+  GLFVDAFKL
Sbjct: 1   QTGDWDILAAAILVAITEIISKLFYSRPSKK--RRSLILELLNLFKIGLIYGLFVDAFKL 58

Query: 202 GS 203
           GS
Sbjct: 59  GS 60

Predicted transmembrane protein found in plants, chloroplasts and cyanobacteria. This family is also known as YCF20. Length = 60

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	203
PF04483	60	DUF565: Protein of unknown function (DUF565); Inte	99.91

>PF04483 DUF565: Protein of unknown function (DUF565); InterPro: IPR007572 This family represents Ycf20, it is found in cyanobacteria and is also encoded in plant and algal chloroplasts; its function is unknown

Probab=99.91  E-value=4.1e-25  Score=157.20  Aligned_cols=60  Identities=48%  Similarity=0.816  Sum_probs=55.2

Q ss_pred             hccCchHHHHHHHHHHHHHHhhhhccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhccCC
Q 038044          142 QTGDWDVLVAGVVVAAIEGIGMLMYKKPPSSTGRLQSFVVMMNYWKAGVCLGLFVDAFKLGS  203 (203)
Q Consensus       142 q~g~wD~l~A~iiVl~iEvis~l~Yr~~~~~~~~~~l~~~lLN~fKIGllYGLFLEAFKLGS  203 (203)
                      |+++|||++|+++|+++|++++++|+++....+  +++++++|+||||++||||+|||||||
T Consensus         1 Q~g~wD~i~a~~iv~~~E~i~~l~Y~~~~~~~~--~~~~~~lN~~KiGl~YgLfleAFKLGS   60 (60)
T PF04483_consen    1 QTGDWDVIAAAIIVLFIEVISRLRYSKPKKKRK--SLLVELLNNFKIGLLYGLFLEAFKLGS   60 (60)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHhhcccccccc--chHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            789999999999999999999999999875433  348999999999999999999999998

As the family is exclusively found in phototrophic organisms it may therefore play a role in photosynthesis.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00