Citrus Sinensis ID: 041376

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------8
Protein Sequence
MADVLRSGIVHCNDTCGCPVPCPGGAACSCSTVAYSEYYHKCCSCGGHCSCNPCTCSKIQANKIGKAHCSCGTACKCPT
Secondary Structure (PSIPRED)
ccccccccEEEEccccccccccccccccEEEcccccccccEEccccccccccccccccHHHcccccEEccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccEEEcccccccccccccccccEEccccccccccccccccccccccccccccEEEcccccEEEcccccccccc
Coil and Loop (DISEMBL)
MADVLRSgivhcndtcgcpvpcpggaacscstvAYSEyyhkccscgghcscnpctcskiqankigkahcscgtackcpt
Flexible Loop (DISEMBL)
MADVLRSGIVHCNDTCGCPVPCPGGAACSCSTVAYSEYYHKCCSCGGHCSCNPCTCSKIQANKIGKAHCSCGTACKCPT
Low Complexity Region (SEG)
MADVLRSGIVHCNDTCGCPVPCPGGAACSCSTVAYSEyyhkccscgghcscNPCTCSKIQANKIGKAHCSCGTACKCPT
Disordered region (IsUnstruct)
****LRSGIVHCNDTCGCPVPCPGGAACSCSTVAYSEYYHKCCSCGGHCSCNPCTCSKIQANKIGKAHCSCGTACK***
Disordered Region (DISOPRED)
***********CNDTCGCPVPCPGGAA****************SCGGHCSCNPCTCSKI******KAHCSCGTACKCP*
Disordered Region (DISEMBL)
MADVLRSGIVHCNDTCGCPVPCPGGAACSCSTVAYSEYYHKCCSCGGHCSCNPCTCSKIQANKIGKAHCSCGTACKCPT
Disordered Region (DISPRO)
*******GIVHCNDTCGCPVPCPGGAACSCST*******HKCCSCGGHCSCNPCTCSKIQANKIGKAHCSCGTACKCP*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MADVLRSGIVHCNDTCGCPVPCPGGAACSCSTVAYSEYYHKCCSCGGHCSCNPCTCSKIQANKIGKAHCSCGTACKCPT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	79	2.2.26 [Sep-21-2011]
Q42377	85	EC protein homolog 2 OS=A	yes	no	0.987	0.917	0.457	3e-10
P93746	84	EC protein homolog 1 OS=A	no	no	0.962	0.904	0.475	8e-10
P43401	77	EC protein homolog OS=Zea	N/A	no	0.886	0.909	0.424	7e-09
P30570	81	EC protein III OS=Triticu	N/A	no	0.860	0.839	0.454	3e-08
Q109B0	87	Class II metallothionein-	yes	no	0.886	0.804	0.472	4e-08
P30569	81	EC protein I/II OS=Tritic	N/A	no	0.860	0.839	0.441	6e-08

>sp|Q42377|EC2_ARATH EC protein homolog 2 OS=Arabidopsis thaliana GN=At2g23240 PE=2 SV=2

 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/83 (45%), Positives = 45/83 (54%), Gaps = 5/83 (6%)

Query: 1  MADVLR-SGIVHCNDTCGCPVPCPGGAACSCSTVAYS---EYYHKCCSCGGHCSCNPCTC 56
          MAD  + S    CND CGCP PCPGG +C C  ++ +   +  H  C CG HC CNPC C
Sbjct: 1  MADTGKGSASASCNDRCGCPSPCPGGESCRCKMMSEASGGDQEHNTCPCGEHCGCNPCNC 60

Query: 57 SKIQANKIGKAHCSCGTACKCPT 79
           K Q     K  C+CG  C C T
Sbjct: 61 PKTQTQTSAKG-CTCGEGCTCAT 82

Binds 5 molecules of zinc. May have a role in Zn(2+) homeostasis during embryogenesis.
Arabidopsis thaliana (taxid: 3702)

>sp|P93746|EC1_ARATH EC protein homolog 1 OS=Arabidopsis thaliana GN=At2g42000 PE=2 SV=2

 Score = 62.4 bits (150), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 38/80 (47%), Positives = 44/80 (55%), Gaps = 4/80 (5%)

Query: 1  MADVLR-SGIVHCNDTCGCPVPCPGGAACSCSTVAYS--EYYHKCCSCGGHCSCNPCTCS 57
          MAD  + S +  CND+CGCP PCPGG +C C     S  +  H  C CG HC CNPC C 
Sbjct: 1  MADTGKGSSVAGCNDSCGCPSPCPGGNSCRCRMREASAGDQGHMVCPCGEHCGCNPCNCP 60

Query: 58 KIQANKIGKAHCSCGTACKC 77
          K Q     K  C+CG  C C
Sbjct: 61 KTQTQTSAKG-CTCGEGCTC 79

Binds 5 molecules of zinc. May have a role in Zn(2+) homeostasis during embryogenesis.

Arabidopsis thaliana (taxid: 3702)

>sp|P43401|EC_MAIZE EC protein homolog OS=Zea mays PE=3 SV=2

 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 3/73 (4%)

Query: 10 VHCNDTCGCPVPCPGGAACSCSTVAYSEYYHKCCSCGGHCSCNPCTCSKI---QANKIGK 66
          + C+D CGC VPCPGG  C C++ +  +  H  C CG HC C+PCTC +       +  +
Sbjct: 1  MGCDDKCGCAVPCPGGKDCRCTSGSGGQREHTTCGCGEHCECSPCTCGRATMPSGRENRR 60

Query: 67 AHCSCGTACKCPT 79
          A+CSCG +C C +
Sbjct: 61 ANCSCGASCNCAS 73

Binds 5 molecules of zinc. May have a role in Zn(2+) homeostasis during embryogenesis.

Zea mays (taxid: 4577)

>sp|P30570|EC3_WHEAT EC protein III OS=Triticum aestivum PE=2 SV=2

 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/77 (45%), Positives = 44/77 (57%), Gaps = 9/77 (11%)

Query: 10 VHCNDTCGCPVPCPGGAACSCSTVAYSEY--YHKCCSCGGHCSCNPCTCSKI-----QAN 62
          + CND CGC VPCPGG  C C++         H  C CG HC CNPC C +      +AN
Sbjct: 1  MGCNDKCGCAVPCPGGTGCRCTSARSDAAAGEHTTCGCGEHCGCNPCACGREGTPSGRAN 60

Query: 63 KIGKAHCSCGTACKCPT 79
          +  +A+CSCG AC C +
Sbjct: 61 R--RANCSCGAACNCAS 75

Binds 5 molecules of zinc. May have a role in Zn(2+) homeostasis during embryogenesis.

Triticum aestivum (taxid: 4565)

>sp|Q109B0|MT21A_ORYSJ Class II metallothionein-like protein 1A OS=Oryza sativa subsp. japonica GN=MT21A PE=2 SV=1

 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 35/74 (47%), Positives = 44/74 (59%), Gaps = 4/74 (5%)

Query: 10 VHCNDTCGCPVPCPGGAACSCSTVAYS-EYYHKCCSCGGHCSCNPCTC---SKIQANKIG 65
          + C+D CGC VPCPGG  C C++ A S    H  CSCG HC CNPC C   S+    +  
Sbjct: 1  MGCDDKCGCAVPCPGGTGCRCASSARSGGGDHTTCSCGDHCGCNPCRCGRESQPTGRENR 60

Query: 66 KAHCSCGTACKCPT 79
          +A CSCG +C C +
Sbjct: 61 RAGCSCGDSCTCAS 74

Metallothioneins have a high content of cysteine residues that bind various heavy metals.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|P30569|EC1_WHEAT EC protein I/II OS=Triticum aestivum PE=1 SV=2

 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/77 (44%), Positives = 45/77 (58%), Gaps = 9/77 (11%)

Query: 10 VHCNDTCGCPVPCPGGAACSCSTV--AYSEYYHKCCSCGGHCSCNPCTCSKI-----QAN 62
          + C+D CGC VPCPGG  C C++     +   H  C CG HC CNPC C +      +AN
Sbjct: 1  MGCDDKCGCAVPCPGGTGCRCTSARSGAAAGEHTTCGCGEHCGCNPCACGREGTPSGRAN 60

Query: 63 KIGKAHCSCGTACKCPT 79
          +  +A+CSCG AC C +
Sbjct: 61 R--RANCSCGAACNCAS 75


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.325    0.136    0.526 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,141,525
Number of Sequences: 539616
Number of extensions: 1159181
Number of successful extensions: 6365
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 142
Number of HSP's successfully gapped in prelim test: 285
Number of HSP's that attempted gapping in prelim test: 4598
Number of HSP's gapped (non-prelim): 1503
length of query: 79
length of database: 191,569,459
effective HSP length: 50
effective length of query: 29
effective length of database: 164,588,659
effective search space: 4773071111
effective search space used: 4773071111
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)

Binds 5 molecules of zinc. May have a role in Zn(2+) homeostasis during embryogenesis.

Triticum aestivum (taxid: 4565)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	79
10834829	83	metallothionein-like protein [Sesamum in	0.987	0.939	0.592	7e-15
399931773	86	putative metallothionein type 4 [Brassic	1.0	0.918	0.518	2e-11
357513307	605	Ribosomal protein S8 [Medicago truncatul	0.797	0.104	0.477	5e-11
255559816	85	EC protein III, putative [Ricinus commun	0.987	0.917	0.518	7e-11
224132442	77	predicted protein [Populus trichocarpa]	0.924	0.948	0.512	5e-10
359474961	78	PREDICTED: EC protein homolog 1-like [Vi	0.924	0.935	0.519	9e-10
4105810	88	PGPS/NH21 [Petunia x hybrida]	0.962	0.863	0.488	1e-08
224102789	90	predicted protein [Populus trichocarpa]	0.987	0.866	0.488	1e-08
15227794	85	Plant EC metallothionein-like protein, f	0.987	0.917	0.457	1e-08
334184866	120	EC protein-1 [Arabidopsis thaliana] gi|3	0.962	0.633	0.475	2e-08

>gi|10834829|gb|AAG23841.1|AF302808_1 metallothionein-like protein [Sesamum indicum] gi|40732882|gb|AAR88997.1| seed-specific metallothionein-like protein [Sesamum indicum]

 Score = 84.7 bits (208), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 48/81 (59%), Positives = 54/81 (66%), Gaps = 3/81 (3%)

Query: 1  MADVLRSGIVHCNDTCGCPVPCPGGAACSCSTVAYSEY--YHKCCSCGGHCSCNPCTCSK 58
          MAD+  SG+V C+D CGCP PCPGG AC CST    +    HK C+CG HC CNPCTCSK
Sbjct: 1  MADMRGSGVV-CDDRCGCPSPCPGGIACRCSTGGGDDTTTEHKQCTCGEHCGCNPCTCSK 59

Query: 59 IQANKIGKAHCSCGTACKCPT 79
           +    GKA C CGT C CPT
Sbjct: 60 SEIRGTGKAFCRCGTGCTCPT 80

Source: Sesamum indicum

Species: Sesamum indicum

Genus: Sesamum

Family: Pedaliaceae

Order: Lamiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|399931773|gb|AFP57436.1| putative metallothionein type 4 [Brassica napus]

 Score = 73.6 bits (179), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/83 (51%), Positives = 52/83 (62%), Gaps = 4/83 (4%)

Query: 1  MADVLR-SGIVHCNDTCGCPVPCPGGAACSCSTVAYS--EYYHKCCSCGGHCSCNPCTCS 57
          MAD+ + + +  CND CGCP PCPGG +C C   A S  +  H  C CG HC CNPCTCS
Sbjct: 1  MADIGKGTSVAGCNDRCGCPSPCPGGESCRCRMSAASGGDQEHNMCPCGEHCGCNPCTCS 60

Query: 58 KIQAN-KIGKAHCSCGTACKCPT 79
          K Q + K GKA C+CG  C C +
Sbjct: 61 KTQTSAKGGKAFCTCGEGCTCAS 83

Source: Brassica napus

Species: Brassica napus

Genus: Brassica

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357513307|ref|XP_003626942.1| Ribosomal protein S8 [Medicago truncatula] gi|355520964|gb|AET01418.1| Ribosomal protein S8 [Medicago truncatula]

 Score = 71.6 bits (174), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 32/67 (47%), Positives = 40/67 (59%), Gaps = 4/67 (5%)

Query: 12 CNDTCGCPVPCPGGAACSCS-TVAYSEYYHKCCSCGGHCSCNPCTCSKIQANKIGKAHCS 70
          C++ CGC +PC GG+ C C+ + + SE  H  CSCG HC CNPC C K  A   G   C 
Sbjct: 10 CDNVCGCTIPCAGGSTCRCTGSESSSEVDHTTCSCGEHCGCNPCACPKNVAAGTG---CK 66

Query: 71 CGTACKC 77
          C +AC C
Sbjct: 67 CSSACAC 73

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255559816|ref|XP_002520927.1| EC protein III, putative [Ricinus communis] gi|223539893|gb|EEF41472.1| EC protein III, putative [Ricinus communis]

 Score = 71.2 bits (173), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 43/83 (51%), Positives = 49/83 (59%), Gaps = 5/83 (6%)

Query: 1  MADVLRSGIVHCNDTCGCPVPCPGGAACSC---STVAYSEYYHKCCSCGGHCSCNPCTCS 57
          MAD  R G + CND CGCPVPCPGG AC C        +   H  CSCG HC CNPCTC 
Sbjct: 1  MADT-RGGSIACNDRCGCPVPCPGGTACRCRISQAAGGAGDAHSKCSCGEHCGCNPCTCP 59

Query: 58 K-IQANKIGKAHCSCGTACKCPT 79
          K ++   +G+A C CG  C C T
Sbjct: 60 KGLETVGVGRASCKCGPGCTCAT 82

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224132442|ref|XP_002328272.1| predicted protein [Populus trichocarpa] gi|222837787|gb|EEE76152.1| predicted protein [Populus trichocarpa]

 Score = 68.6 bits (166), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 41/80 (51%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 1  MADVLRSGIVHCNDTCGCPVPCPGGAACSCSTVAYSEYYHKCCSCGGHCSCNPCTCSK-I 59
          MAD  R G V CND CGCPVPC GG +C      +++     CSCG HC CNPCTC + +
Sbjct: 1  MADT-RGGTVGCNDGCGCPVPCAGGTSCGGEGAGHNK-----CSCGEHCGCNPCTCPRSV 54

Query: 60 QANKIGKAHCSCGTACKCPT 79
              +GKA+C CG  C CPT
Sbjct: 55 VTTGVGKAYCKCGADCACPT 74

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359474961|ref|XP_003631560.1| PREDICTED: EC protein homolog 1-like [Vitis vinifera]

 Score = 67.4 bits (163), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 40/77 (51%), Positives = 44/77 (57%), Gaps = 4/77 (5%)

Query: 1  MADVLRSGIVHCNDTCGCPVPCPGGAACSCSTVAYSEYYHKCCSCGGHCSCNPCTCSKIQ 60
          MADV R G   C+  CGCPVPCPGG  C CST   S   H  C CG HC CNPCTC + +
Sbjct: 1  MADV-RGG---CDAGCGCPVPCPGGVDCKCSTTGASAADHSTCPCGEHCGCNPCTCPRGE 56

Query: 61 ANKIGKAHCSCGTACKC 77
              GK +C C   C C
Sbjct: 57 VTGTGKLYCKCADGCTC 73

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|4105810|gb|AAD02561.1| PGPS/NH21 [Petunia x hybrida]

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/84 (48%), Positives = 48/84 (57%), Gaps = 8/84 (9%)

Query: 1  MADVLRSGIVHCNDTCGCPVPCPGGAACSCSTVAYS-----EYYHKCCSCGGHCSCNPCT 55
          MAD LR     C++ CGCP PCPGG AC C++   +     +  HK C CG HC CNPCT
Sbjct: 1  MAD-LRGSSAICDERCGCPSPCPGGVACRCASGGAATAGGGDMEHKKCPCGEHCGCNPCT 59

Query: 56 CSKIQANKI--GKAHCSCGTACKC 77
          C K +      GKAHC CG  C C
Sbjct: 60 CPKSEGTTAGSGKAHCKCGPGCTC 83

Source: Petunia x hybrida

Species: Petunia x hybrida

Genus: Petunia

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224102789|ref|XP_002312801.1| predicted protein [Populus trichocarpa] gi|222849209|gb|EEE86756.1| predicted protein [Populus trichocarpa]

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/88 (48%), Positives = 49/88 (55%), Gaps = 10/88 (11%)

Query: 1  MADVLRSGIVHCNDTCGCPVPCPGGAACSCSTVAYSEYY-------HKCCSCGGH-CSCN 52
          MAD  R G V  ND  GCPVPCPGG A        S+         HK CSCG H C CN
Sbjct: 1  MADT-RGGTVGFNDGDGCPVPCPGGTARRILAAGGSDTSGEGEGAGHKKCSCGEHYCGCN 59

Query: 53 PCTCSK-IQANKIGKAHCSCGTACKCPT 79
          PCTC + +    +GKA+C+CG  C CPT
Sbjct: 60 PCTCPRSVVTTGVGKAYCTCGAGCACPT 87

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15227794|ref|NP_179905.1| Plant EC metallothionein-like protein, family 15 [Arabidopsis thaliana] gi|19884307|sp|Q42377.2|EC2_ARATH RecName: Full=EC protein homolog 2 gi|2642439|gb|AAB87107.1| metallothionein-like protein [Arabidopsis thaliana] gi|330252338|gb|AEC07432.1| Plant EC metallothionein-like protein, family 15 [Arabidopsis thaliana]

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/83 (45%), Positives = 45/83 (54%), Gaps = 5/83 (6%)

Query: 1  MADVLR-SGIVHCNDTCGCPVPCPGGAACSCSTVAYS---EYYHKCCSCGGHCSCNPCTC 56
          MAD  + S    CND CGCP PCPGG +C C  ++ +   +  H  C CG HC CNPC C
Sbjct: 1  MADTGKGSASASCNDRCGCPSPCPGGESCRCKMMSEASGGDQEHNTCPCGEHCGCNPCNC 60

Query: 57 SKIQANKIGKAHCSCGTACKCPT 79
           K Q     K  C+CG  C C T
Sbjct: 61 PKTQTQTSAKG-CTCGEGCTCAT 82

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|334184866|ref|NP_001189730.1| EC protein-1 [Arabidopsis thaliana] gi|330254967|gb|AEC10061.1| EC protein-1 [Arabidopsis thaliana]

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/80 (47%), Positives = 44/80 (55%), Gaps = 4/80 (5%)

Query: 1   MADVLR-SGIVHCNDTCGCPVPCPGGAACSCSTVAYS--EYYHKCCSCGGHCSCNPCTCS 57
           MAD  + S +  CND+CGCP PCPGG +C C     S  +  H  C CG HC CNPC C 
Sbjct: 37  MADTGKGSSVAGCNDSCGCPSPCPGGNSCRCRMREASAGDQGHMVCPCGEHCGCNPCNCP 96

Query: 58  KIQANKIGKAHCSCGTACKC 77
           K Q     K  C+CG  C C
Sbjct: 97  KTQTQTSAKG-CTCGEGCTC 115

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	79
TAIR|locus:2058593	85	AtMT4b "Arabidopsis thaliana m	0.987	0.917	0.373	2.8e-11
UNIPROTKB|I3LQ45	68	MT3 "Metallothionein" [Sus scr	0.177	0.205	0.5	0.00019
MGI|MGI:97173	68	Mt3 "metallothionein 3" [Mus m	0.177	0.205	0.5	0.00095
RGD|621252	66	Mt3 "metallothionein 3" [Rattu	0.177	0.212	0.5	0.00095

TAIR|locus:2058593 AtMT4b "Arabidopsis thaliana metallothionein 4b" [Arabidopsis thaliana (taxid:3702)]

 Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
 Identities = 31/83 (37%), Positives = 37/83 (44%)

Query:     1 MADVLR-SGIVHCNDTCGCPVPCPGGAACSCSTVAYSEXXXXXXXX---XXXXXXNPCTC 56
             MAD  + S    CND CGCP PCPGG +C C  ++ +                  NPC C
Sbjct:     1 MADTGKGSASASCNDRCGCPSPCPGGESCRCKMMSEASGGDQEHNTCPCGEHCGCNPCNC 60

Query:    57 SKIQANKIGKAHCSCGTACKCPT 79
              K Q     K  C+CG  C C T
Sbjct:    61 PKTQTQTSAKG-CTCGEGCTCAT 82

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0006829 "zinc ion transport" evidence=IMP

GO:0016020 "membrane" evidence=IDA

GO:0016114 "terpenoid biosynthetic process" evidence=RCA

UNIPROTKB|I3LQ45 MT3 "Metallothionein" [Sus scrofa (taxid:9823)]

 Score = 52 (23.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
 Identities = 9/18 (50%), Positives = 12/18 (66%)

Query:    14 DTCGCPVPCPGGAACSCS 31
             +TC    PCP G +CSC+
Sbjct:     4 ETC----PCPTGGSCSCA 17

GO:2000378 "negative regulation of reactive oxygen species metabolic process" evidence=IEA

GO:2000376 "positive regulation of oxygen metabolic process" evidence=IEA

GO:0097214 "positive regulation of lysosomal membrane permeability" evidence=IEA

GO:0071732 "cellular response to nitric oxide" evidence=IEA

GO:0071456 "cellular response to hypoxia" evidence=IEA

GO:0071276 "cellular response to cadmium ion" evidence=IEA

GO:0070374 "positive regulation of ERK1 and ERK2 cascade" evidence=IEA

GO:0070371 "ERK1 and ERK2 cascade" evidence=IEA

GO:0060547 "negative regulation of necrotic cell death" evidence=IEA

GO:0060049 "regulation of protein glycosylation" evidence=IEA

GO:0055073 "cadmium ion homeostasis" evidence=IEA

GO:0051354 "negative regulation of oxidoreductase activity" evidence=IEA

GO:0050821 "protein stabilization" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

GO:0046870 "cadmium ion binding" evidence=IEA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IEA

GO:0044242 "cellular lipid catabolic process" evidence=IEA

GO:0043524 "negative regulation of neuron apoptotic process" evidence=IEA

GO:0043491 "protein kinase B signaling cascade" evidence=IEA

GO:0043027 "cysteine-type endopeptidase inhibitor activity involved in apoptotic process" evidence=IEA

GO:0036091 "positive regulation of transcription from RNA polymerase II promoter in response to oxidative stress" evidence=IEA

GO:0035690 "cellular response to drug" evidence=IEA

GO:0033210 "leptin-mediated signaling pathway" evidence=IEA

GO:0032148 "activation of protein kinase B activity" evidence=IEA

GO:0032095 "regulation of response to food" evidence=IEA

GO:0030949 "positive regulation of vascular endothelial growth factor receptor signaling pathway" evidence=IEA

GO:0030517 "negative regulation of axon extension" evidence=IEA

GO:0030295 "protein kinase activator activity" evidence=IEA

GO:0019430 "removal of superoxide radicals" evidence=IEA

GO:0016570 "histone modification" evidence=IEA

GO:0016234 "inclusion body" evidence=IEA

GO:0014002 "astrocyte development" evidence=IEA

GO:0010940 "positive regulation of necrotic cell death" evidence=IEA

GO:0010507 "negative regulation of autophagy" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0008144 "drug binding" evidence=IEA

GO:0008021 "synaptic vesicle" evidence=IEA

GO:0006882 "cellular zinc ion homeostasis" evidence=IEA

GO:0006875 "cellular metal ion homeostasis" evidence=IEA

GO:0006829 "zinc ion transport" evidence=IEA

GO:0006707 "cholesterol catabolic process" evidence=IEA

GO:0006112 "energy reserve metabolic process" evidence=IEA

GO:0005507 "copper ion binding" evidence=IEA

GO:0000060 "protein import into nucleus, translocation" evidence=IEA

MGI|MGI:97173 Mt3 "metallothionein 3" [Mus musculus (taxid:10090)]

 Score = 52 (23.4 bits), Expect = 0.00095, Sum P(2) = 0.00095
 Identities = 9/18 (50%), Positives = 12/18 (66%)

Query:    14 DTCGCPVPCPGGAACSCS 31
             +TC    PCP G +C+CS
Sbjct:     4 ETC----PCPTGGSCTCS 17

GO:0000060 "protein import into nucleus, translocation" evidence=ISO

GO:0001666 "response to hypoxia" evidence=ISO

GO:0001934 "positive regulation of protein phosphorylation" evidence=ISO

GO:0005507 "copper ion binding" evidence=ISO

GO:0005622 "intracellular" evidence=ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0006112 "energy reserve metabolic process" evidence=IMP

GO:0006707 "cholesterol catabolic process" evidence=IMP

GO:0006829 "zinc ion transport" evidence=IDA

GO:0006875 "cellular metal ion homeostasis" evidence=IDA

GO:0006882 "cellular zinc ion homeostasis" evidence=IMP;IDA

GO:0006979 "response to oxidative stress" evidence=IMP

GO:0008021 "synaptic vesicle" evidence=IDA

GO:0008144 "drug binding" evidence=ISO

GO:0008270 "zinc ion binding" evidence=IC;ISO;IDA

GO:0010507 "negative regulation of autophagy" evidence=IMP

GO:0010628 "positive regulation of gene expression" evidence=ISO;IMP

GO:0010940 "positive regulation of necrotic cell death" evidence=ISO

GO:0010942 "positive regulation of cell death" evidence=ISO;IMP

GO:0014002 "astrocyte development" evidence=IDA

GO:0016234 "inclusion body" evidence=ISO

GO:0016570 "histone modification" evidence=ISO

GO:0019430 "removal of superoxide radicals" evidence=ISO

GO:0030295 "protein kinase activator activity" evidence=ISO

GO:0030308 "negative regulation of cell growth" evidence=ISO

GO:0030517 "negative regulation of axon extension" evidence=ISO

GO:0030949 "positive regulation of vascular endothelial growth factor receptor signaling pathway" evidence=ISO

GO:0032095 "regulation of response to food" evidence=IMP

GO:0032148 "activation of protein kinase B activity" evidence=ISO

GO:0033210 "leptin-mediated signaling pathway" evidence=IMP

GO:0034599 "cellular response to oxidative stress" evidence=IDA

GO:0035690 "cellular response to drug" evidence=ISO

GO:0036091 "positive regulation of transcription from RNA polymerase II promoter in response to oxidative stress" evidence=ISO

GO:0043027 "cysteine-type endopeptidase inhibitor activity involved in apoptotic process" evidence=ISO

GO:0043066 "negative regulation of apoptotic process" evidence=ISO;IMP

GO:0043085 "positive regulation of catalytic activity" evidence=IMP

GO:0043154 "negative regulation of cysteine-type endopeptidase activity involved in apoptotic process" evidence=ISO

GO:0043491 "protein kinase B signaling cascade" evidence=ISO

GO:0043524 "negative regulation of neuron apoptotic process" evidence=IDA

GO:0044242 "cellular lipid catabolic process" evidence=IMP

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=ISO;IMP

GO:0046870 "cadmium ion binding" evidence=ISO

GO:0046872 "metal ion binding" evidence=IDA

GO:0048471 "perinuclear region of cytoplasm" evidence=ISO

GO:0050768 "negative regulation of neurogenesis" evidence=IDA

GO:0050821 "protein stabilization" evidence=ISO

GO:0051354 "negative regulation of oxidoreductase activity" evidence=ISO

GO:0055069 "zinc ion homeostasis" evidence=ISO

GO:0055073 "cadmium ion homeostasis" evidence=ISO;IMP

GO:0060049 "regulation of protein glycosylation" evidence=IMP

GO:0060547 "negative regulation of necrotic cell death" evidence=ISO;IMP

GO:0070371 "ERK1 and ERK2 cascade" evidence=ISO

GO:0070374 "positive regulation of ERK1 and ERK2 cascade" evidence=ISO;IMP

GO:0071276 "cellular response to cadmium ion" evidence=ISO

GO:0071732 "cellular response to nitric oxide" evidence=ISO

GO:0097214 "positive regulation of lysosomal membrane permeability" evidence=IMP

GO:2000117 "negative regulation of cysteine-type endopeptidase activity" evidence=ISO

GO:2000376 "positive regulation of oxygen metabolic process" evidence=IMP

GO:2000378 "negative regulation of reactive oxygen species metabolic process" evidence=ISO

RGD|621252 Mt3 "metallothionein 3" [Rattus norvegicus (taxid:10116)]

 Score = 52 (23.4 bits), Expect = 0.00095, Sum P(2) = 0.00095
 Identities = 9/18 (50%), Positives = 12/18 (66%)

Query:    14 DTCGCPVPCPGGAACSCS 31
             +TC    PCP G +C+CS
Sbjct:     4 ETC----PCPTGGSCTCS 17

GO:0000060 "protein import into nucleus, translocation" evidence=ISO;ISS

GO:0001666 "response to hypoxia" evidence=ISO;ISS

GO:0001934 "positive regulation of protein phosphorylation" evidence=ISO;ISS

GO:0005507 "copper ion binding" evidence=ISO;ISS

GO:0005622 "intracellular" evidence=ISO;ISS

GO:0005634 "nucleus" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISO

GO:0006112 "energy reserve metabolic process" evidence=ISO;ISS

GO:0006707 "cholesterol catabolic process" evidence=ISO;ISS

GO:0006829 "zinc ion transport" evidence=ISO;ISS

GO:0006875 "cellular metal ion homeostasis" evidence=IEA;ISO

GO:0006882 "cellular zinc ion homeostasis" evidence=ISO;ISS

GO:0006979 "response to oxidative stress" evidence=ISO

GO:0008021 "synaptic vesicle" evidence=ISO;ISS

GO:0008144 "drug binding" evidence=ISO;ISS

GO:0008270 "zinc ion binding" evidence=ISO;ISS

GO:0010507 "negative regulation of autophagy" evidence=ISO;ISS

GO:0010628 "positive regulation of gene expression" evidence=ISO;ISS

GO:0010940 "positive regulation of necrotic cell death" evidence=ISO;ISS

GO:0010942 "positive regulation of cell death" evidence=ISO;ISS

GO:0014002 "astrocyte development" evidence=ISO;ISS

GO:0016234 "inclusion body" evidence=ISO;ISS

GO:0016570 "histone modification" evidence=ISO;ISS

GO:0019430 "removal of superoxide radicals" evidence=ISO;ISS

GO:0030295 "protein kinase activator activity" evidence=ISO;ISS

GO:0030308 "negative regulation of cell growth" evidence=ISO;ISS;NAS

GO:0030517 "negative regulation of axon extension" evidence=ISO;ISS

GO:0030949 "positive regulation of vascular endothelial growth factor receptor signaling pathway" evidence=ISO;ISS

GO:0032095 "regulation of response to food" evidence=ISO;ISS

GO:0032148 "activation of protein kinase B activity" evidence=ISO;ISS

GO:0033210 "leptin-mediated signaling pathway" evidence=ISO;ISS

GO:0034599 "cellular response to oxidative stress" evidence=ISO;ISS

GO:0035690 "cellular response to drug" evidence=ISO;ISS

GO:0036091 "positive regulation of transcription from RNA polymerase II promoter in response to oxidative stress" evidence=ISO;ISS

GO:0043027 "cysteine-type endopeptidase inhibitor activity involved in apoptotic process" evidence=ISO;ISS

GO:0043066 "negative regulation of apoptotic process" evidence=ISO;ISS

GO:0043085 "positive regulation of catalytic activity" evidence=ISO;ISS

GO:0043154 "negative regulation of cysteine-type endopeptidase activity involved in apoptotic process" evidence=ISO;ISS

GO:0043491 "protein kinase B signaling cascade" evidence=ISO;ISS

GO:0043524 "negative regulation of neuron apoptotic process" evidence=ISO;ISS

GO:0044242 "cellular lipid catabolic process" evidence=ISO;ISS

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=ISO;ISS

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=ISO;ISS

GO:0046870 "cadmium ion binding" evidence=ISO;ISS

GO:0046872 "metal ion binding" evidence=ISO

GO:0048471 "perinuclear region of cytoplasm" evidence=ISO;ISS

GO:0050768 "negative regulation of neurogenesis" evidence=ISO;NAS

GO:0050774 "negative regulation of dendrite morphogenesis" evidence=NAS

GO:0050821 "protein stabilization" evidence=ISO;ISS

GO:0051354 "negative regulation of oxidoreductase activity" evidence=ISO;ISS

GO:0055069 "zinc ion homeostasis" evidence=ISO;ISS

GO:0055073 "cadmium ion homeostasis" evidence=ISO;ISS

GO:0060049 "regulation of protein glycosylation" evidence=ISO;ISS

GO:0060547 "negative regulation of necrotic cell death" evidence=ISO;ISS

GO:0070371 "ERK1 and ERK2 cascade" evidence=ISO;ISS

GO:0070374 "positive regulation of ERK1 and ERK2 cascade" evidence=ISO;ISS

GO:0071276 "cellular response to cadmium ion" evidence=ISO;ISS

GO:0071456 "cellular response to hypoxia" evidence=IEA;ISO

GO:0071732 "cellular response to nitric oxide" evidence=ISO;ISS

GO:0097214 "positive regulation of lysosomal membrane permeability" evidence=ISO;ISS

GO:2000117 "negative regulation of cysteine-type endopeptidase activity" evidence=ISO;ISS

GO:2000376 "positive regulation of oxygen metabolic process" evidence=ISO;ISS

GO:2000378 "negative regulation of reactive oxygen species metabolic process" evidence=ISO;ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q109B0	MT21A_ORYSJ	No assigned EC number	0.4729	0.8860	0.8045	yes	no
Q42377	EC2_ARATH	No assigned EC number	0.4578	0.9873	0.9176	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	79
PF02068	76	Metallothio_PEC: Plant PEC family metallothionein;	100.0
PF01439	74	Metallothio_2: Metallothionein; InterPro: IPR00034	96.25

>PF02068 Metallothio_PEC: Plant PEC family metallothionein; InterPro: IPR000316 Metallothioneins (MT) are small proteins that bind heavy metals, such as zinc, copper, cadmium, nickel, etc

Probab=100.00  E-value=6e-37  Score=201.27  Aligned_cols=69  Identities=57%  Similarity=1.405  Sum_probs=34.0

Q ss_pred             EeCCCCCCCcCCCCCCcceeeec-c-cCcccceeecCCCCccccCCccCCc--eeccCCccccccCCCcccCC
Q 041376           11 HCNDTCGCPVPCPGGAACSCSTV-A-YSEYYHKCCSCGGHCSCNPCTCSKI--QANKIGKAHCSCGTACKCPT   79 (79)
Q Consensus        11 ~C~d~CGC~vPCpgG~~CrC~~~-~-~~~~~H~~C~CGEHCgCNPCtC~k~--~~~g~gka~C~CG~~C~C~s   79 (79)
                      +|||+||||||||||++|||++. + +++++|+||+|||||+||||+|||+  +++|+||||||||++|+|++
T Consensus         1 ~Cdd~CGC~vPCpgG~~CrC~~~~a~~~~~~H~~C~CGEhCgCnPCtC~k~e~~~sg~gka~C~CG~~C~C~s   73 (76)
T PF02068_consen    1 GCDDRCGCPVPCPGGTACRCTSSSAGGGGGDHTTCSCGEHCGCNPCTCPKTETTASGSGKAFCKCGSGCTCAS   73 (76)
T ss_dssp             ---GGGSS-SS-SSSTTSCCCS----------S-BTTTB--TTS--TT---------SS-S-----SS---HH
T ss_pred             CCcCCcCCCccCCCCCccccccccCCCCCCCcccccCCCcccccCccCCCcccccccccccccccCCCccccc
Confidence            69999999999999999999887 3 8899999999999999999999998  68999999999999999974

They have a high content of cysteine residues that bind the metal ions through clusters of thiolate bonds [, , , ]. An empirical classification into three classes has been proposed by Fowler and coworkers [] and Kojima []. Members of class I are defined to include polypeptides related in the positions of their cysteines to equine MT-1B, and include mammalian MTs as well as MTs from crustaceans and molluscs. Class II groups MTs from a variety of species, including sea urchins, fungi, insects and cyanobacteria. Class III MTs are atypical polypeptides composed of gamma-glutamylcysteinyl units []. This original classification system has been found to be limited, in the sense that it does not allow clear differentiation of patterns of structural similarities, either between or within classes. Consequently, all class I and class II MTs (the proteinaceous sequences) have now been grouped into families of phylogenetically-related and thus alignable sequences. This system subdivides the MT superfamily into families, subfamilies, subgroups, and isolated isoforms and alleles. The metallothionein superfamily comprises all polypeptides that resemble equine renal metallothionein in several respects []: e.g., low molecular weight; high metal content; amino acid composition with high Cys and low aromatic residue content; unique sequence with characteristic distribution of cysteines, and spectroscopic manifestations indicative of metal thiolate clusters. A MT family subsumes MTs that share particular sequence-specific features and are thought to be evolutionarily related. The inclusion of a MT within a family presupposes that its amino acid sequence is alignable with that of all members. Fifteen MT families have been characterised, each family being identified by its number and its taxonomic range: e.g., Family 1: vertebrate MTs. Family 15 consists of planta MTs. Its members are recognised by the sequence pattern [YFH]-x(5,25)-C-[SKD]-C-[GA]-[SDPAT]-x(0,1)-C-x-[CYF] which yields all plant sequences, but also MTCU_HELPO and the non-MT ITB3_HUMAN. The taxonomic range of the members extends to planta. Planta MTs are 45-84 residue proteins, containing 17 conserved cysteines that bind 5 zinc ions. Generally, there are two Cys-rich regions (domain 1 and domain 3) separated by a Cys-poor region (domain 2) and only the domain 2 contains unusual residues. It is believed that the proteins may have a role in Zn2+ homeostasis during embryogenesis. Family 15 includes the following subfamilies: p1, p2, p2v, p3, pec, p21. ; GO: 0008270 zinc ion binding; PDB: 2L62_A 2KAK_A 2L61_A.

>PF01439 Metallothio_2: Metallothionein; InterPro: IPR000347 Members of this family are metallothioneins

Probab=96.25  E-value=0.0033  Score=41.14  Aligned_cols=20  Identities=40%  Similarity=1.323  Sum_probs=17.4

Q ss_pred             cccceeecCCCCccccCCcc
Q 041376           37 EYYHKCCSCGGHCSCNPCTC   56 (79)
Q Consensus        37 ~~~H~~C~CGEHCgCNPCtC   56 (79)
                      +.++.-|.||..|.||||+|
T Consensus        55 ~~~~~GCKCGsnC~CdPCnC   74 (74)
T PF01439_consen   55 GAGGNGCKCGSNCTCDPCNC   74 (74)
T ss_pred             cccCCCCCCCCCCccCCCcC
Confidence            33678899999999999997

These proteins are cysteine rich proteins that bind to heavy metals. Members of this family appear to be closest to Class II metallothioneins.; GO: 0046872 metal ion binding

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	79
2kak_A	53	EC protein I/II; metallothionein, solution structu	99.84
2l61_A	26	EC protein I/II; metallothionein, wheat EC-1, Zn b	99.27
1qjl_A	28	Metallothionein; metal-binding, detoxification, ra	86.2
2kak_A	53	EC protein I/II; metallothionein, solution structu	83.4

>2kak_A EC protein I/II; metallothionein, solution structure, wheat EC-1, Zn binding, metal-binding, metal-thiolate cluster, zinc; NMR {Triticum aestivum}

Probab=99.84  E-value=3.4e-22  Score=123.58  Aligned_cols=42  Identities=45%  Similarity=1.243  Sum_probs=39.6

Q ss_pred             ccceeecCCCCccccCCccCCce-eccCC--ccccccCCCcccCC
Q 041376           38 YYHKCCSCGGHCSCNPCTCSKIQ-ANKIG--KAHCSCGTACKCPT   79 (79)
Q Consensus        38 ~~H~~C~CGEHCgCNPCtC~k~~-~~g~g--ka~C~CG~~C~C~s   79 (79)
                      .+|+||+|||||+||||+|||++ ++|++  ||||+||++|+|++
T Consensus         1 ~~H~tC~CGEHCgCnPCtC~k~~~~sG~g~rka~C~CG~~C~Cas   45 (53)
T 2kak_A            1 GEHTTCGCGEHCGCNPCACGREGTPSGRANRRANCSCGAACNCAS   45 (53)
T ss_dssp             CCCSCBTTTBCCTTSCCTTCCCCCCCCSSSSCSCCCCCSSCCCHH
T ss_pred             CCcccccCCCcccccCccCCCccccccccccccccccCCCccccc
Confidence            38999999999999999999998 88998  99999999999974

>2l61_A EC protein I/II; metallothionein, wheat EC-1, Zn binding, metal-thiolate CLUS metal binding protein; NMR {Triticum aestivum} PDB: 2l62_A

Probab=99.27  E-value=4.9e-13  Score=72.87  Aligned_cols=23  Identities=57%  Similarity=1.681  Sum_probs=21.3

Q ss_pred             eEeCCCCCCCcCCCCCCcceeee
Q 041376           10 VHCNDTCGCPVPCPGGAACSCST   32 (79)
Q Consensus        10 ~~C~d~CGC~vPCpgG~~CrC~~   32 (79)
                      ++|||+||||||||||++|||++
T Consensus         2 ~~cnd~cGCpvPCpGg~acRcs~   24 (26)
T 2l61_A            2 SGCDDKCGCAVPCPGGTGCRCTS   24 (26)
T ss_dssp             CCCCGGGSSCSSCSSSTTSGGGS
T ss_pred             ccccCCCCCcccCCCCcceeeee
Confidence            57999999999999999999954

>1qjl_A Metallothionein; metal-binding, detoxification, radical scavenger; NMR {Strongylocentrotus purpuratus} SCOP: g.46.1.1

Probab=86.20  E-value=0.3  Score=26.31  Aligned_cols=17  Identities=41%  Similarity=1.249  Sum_probs=14.4

Q ss_pred             eeecCCCCccccCCccC
Q 041376           41 KCCSCGGHCSCNPCTCS   57 (79)
Q Consensus        41 ~~C~CGEHCgCNPCtC~   57 (79)
                      ..|.||..|.|+||+|.
T Consensus        11 ~~CkCgs~C~C~~C~C~   27 (28)
T 1qjl_A           11 NGCKCGSGCSCTEGNCA   27 (28)
T ss_dssp             TTCCTTSCCCCBTTBCC
T ss_pred             CCCccCCCcccCCcccc
Confidence            34999999999999984

>2kak_A EC protein I/II; metallothionein, solution structure, wheat EC-1, Zn binding, metal-binding, metal-thiolate cluster, zinc; NMR {Triticum aestivum}

Probab=83.40  E-value=0.33  Score=29.67  Aligned_cols=45  Identities=31%  Similarity=0.892  Sum_probs=28.4

Q ss_pred             eEeCCCCCCCcCCCCCCcceeeecc-cCcccceeecCCCCccccCCccCCc
Q 041376           10 VHCNDTCGCPVPCPGGAACSCSTVA-YSEYYHKCCSCGGHCSCNPCTCSKI   59 (79)
Q Consensus        10 ~~C~d~CGC~vPCpgG~~CrC~~~~-~~~~~H~~C~CGEHCgCNPCtC~k~   59 (79)
                      ..|-+-|+| +||....    +... +.+....+|+||+-|.|.-|.+++.
T Consensus         6 C~CGEHCgC-nPCtC~k----~~~~sG~g~rka~C~CG~~C~CasC~~a~a   51 (53)
T 2kak_A            6 CGCGEHCGC-NPCACGR----EGTPSGRANRRANCSCGAACNCASCGSATA   51 (53)
T ss_dssp             BTTTBCCTT-SCCTTCC----CCCCCCSSSSCSCCCCCSSCCCHHHHCCSS
T ss_pred             ccCCCcccc-cCccCCC----ccccccccccccccccCCCccccccccccC
Confidence            345555666 3443322    1111 4455578999999999999888764

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00