Citrus Sinensis ID: 042655


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390--
NFLLLVKPQIRLCFVTMDFPTRRIFHLIVFSSLLCFQIRAQAEPSGSVFFIDNPTRQFIRTPSQNDVAQSRSMSLLEVSAAVSVLLGFAPPASLSADGSSKLNEVLVPNPFDRPCAVFMLEVRGVGDPKLTDDLDNTQLFDAYHSKIIPGPRKADIQIPDEDQVSVVFLDELSEDRTDKEIRNFASWLGGSYVADTLEPLNGELIIPVADGDHVKLHMSKKAEKDFALKLLVLSQNIKRAVDVHEHLAQSIRRPAELMMGSFDGIKALQEQYGLGQQGMKILLATLSRIFDSLQTAYEGQIVGVVFFNETPSPQSESVLNLMYTSRPSPRMLAETEGSRNATLAAAEVLLVRRTLAWLTGIILIIATLFGIYFLLNMPLTRDTLLYSNVKLD
ccEEEEcccEEEEEEEEcccHHHHHHHHHHHHHHHHHHHHccccccEEEEEEcccccccccccccHHHHHccccHHHHHHHHHHHHcccccccccccccccccccccccccccccEEEEEEEEccccccccccccccccccccccccccccccccccccccccEEEEEcccccccccHHHHHHHHHHccccccccccccccccccEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEccccccccccEEEcccccccccccHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEcccccc
cEEEEEcccEEEEEEEccccHHHHHHHHHHHHHHHHHHHHccccccEEEEEEcccccHccccccccHHHcccccHHHHHHHHHHHHcccccccccHHHHHHHHHHccccccccccEEEEEEEEccccccccEccccHHHHHHHccccccccccccEEcccccEEEEEEcccccccccHHHHHHHHHHHccccccccccccccEEEEEccccccEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHcccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEcccccccHcccEEEccccccHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEcccccc
NFLLLVKPQIRLCfvtmdfptrrIFHLIVFSSLLCFQIraqaepsgsvffidnptrqfirtpsqndvaqsRSMSLLEVSAAVSVLLgfappaslsadgssklnevlvpnpfdrpcAVFMLevrgvgdpkltddldntqlfdayhskiipgprkadiqipdedqvSVVFLDelsedrtdKEIRNFASwlggsyvadtleplngeliipvadgdhvklhMSKKAEKDFALKLLVLSQNIKRAVDVHEHLAQSirrpaelmmGSFDGIKALQEQYGLGQQGMKILLATLSRIFDSLQTAYEGQIVGVVFfnetpspqsesvlnlmytsrpsprmlaetegSRNATLAAAEVLLVRRTLAWLTGIILIIATLFGIYFLlnmpltrdtlLYSNVKLD
NFLLLVKPQIRLCFVTMDFPTRRIFHLIVFSSLLCFQIRAQAEPSGSVFFIDNPTRQFIRTPSQNDVAQSRSMSLLEVSAAVSVLLGFAPPASLSADGSSKLNEVLVPNPFDRPCAVFMLEVRGVGDPKLTDDLDNTQLFDAYHSKiipgprkadiqipdeDQVSVVFLdelsedrtdKEIRNFASWLGGSYVADTLEPLNGELIIPVADGDHVKLHMSKKAEKDFALKLLVLSQNIKRAVDVHEHLAQSIRRPAELMMGSFDGIKALQEQYGLGQQGMKILLATLSRIFDSLQTAYEGQIVGVVFFNETPSPQSESVLNLMYTSRPSPRMLAETEGSRNATLAAAEVLLVRRTLAWLTGIILIIATLFGIYFLLNmpltrdtllysnvkld
NFLLLVKPQIRLCFVTMDFPTRRIFHLIVFSSLLCFQIRAQAEPSGSVFFIDNPTRQFIRTPSQNDVAQSRsmsllevsaavsvllGFAPPASLSADGSSKLNEVLVPNPFDRPCAVFMLEVRGVGDPKLTDDLDNTQLFDAYHSKIIPGPRKADIQIPDEDQVSVVFLDELSEDRTDKEIRNFASWLGGSYVADTLEPLNGELIIPVADGDHVKLHMSKKAEKDFALKLLVLSQNIKRAVDVHEHLAQSIRRPAELMMGSFDGIKALQEQYGLGQQGMKILLATLSRIFDSLQTAYEGQIVGVVFFNETPSPQSESVLNLMYTSRPSPRMLAETEGSRNATLAAAEVLLVRRTLAWLTGIILIIATLFGIYFLLNMPLTRDTLLYSNVKLD
*FLLLVKPQIRLCFVTMDFPTRRIFHLIVFSSLLCFQIRAQAEPSGSVFFIDNPTRQFI***************LLEVSAAVSVLLGFAP***********LNEVLVPNPFDRPCAVFMLEVRGVGDPKLTDDLDNTQLFDAYHSKIIPGPRKADIQIPDEDQVSVVFLDELSEDRTDKEIRNFASWLGGSYVADTLEPLNGELIIPVADGDHVKLHMSKKAEKDFALKLLVLSQNIKRAVDVHEHLAQSIRRPAELMMGSFDGIKALQEQYGLGQQGMKILLATLSRIFDSLQTAYEGQIVGVVFFN*********************************TLAAAEVLLVRRTLAWLTGIILIIATLFGIYFLLNMPLTRDTLLYSN****
NFLLLVKPQIRLCFVTMDFPTRRIFHLIVFSSLLCFQI*****PSGSVFFIDNPTRQF******************EVSAAVSVLLGFAPPAS***********VLVPNPFDRPCAVFMLEVRGVGDPKLT**LDNTQLFDAYHSKIIPGPRKADIQIPDEDQVSVVFLDELSEDRTDKEIRNFASWLGGSYVADTLEPLNGELIIPVADGDHVKLHMSKKAEKDFALKLLVLSQNIK*****************ELMMGSFDGIKALQ***********ILLATLSRIFDSLQTAYEGQIVGVVFFNETPS****************************ATLAAAEVLLVRRTLAWLTGIILIIATLFGIYFLLNMPLTRDTLLYSNVK**
NFLLLVKPQIRLCFVTMDFPTRRIFHLIVFSSLLCFQIRAQAEPSGSVFFIDNPTRQFIRTP*********SMSLLEVSAAVSVLLGFAPPASLSADGSSKLNEVLVPNPFDRPCAVFMLEVRGVGDPKLTDDLDNTQLFDAYHSKIIPGPRKADIQIPDEDQVSVVFLDELSEDRTDKEIRNFASWLGGSYVADTLEPLNGELIIPVADGDHVKLHMSKKAEKDFALKLLVLSQNIKRAVDVHEHLAQSIRRPAELMMGSFDGIKALQEQYGLGQQGMKILLATLSRIFDSLQTAYEGQIVGVVFFNETPSPQSESVLNLMYTSRPSPRMLAETEGSRNATLAAAEVLLVRRTLAWLTGIILIIATLFGIYFLLNMPLTRDTLLYSNVKLD
NFLLLVKPQIRLCFVTMDFPTRRIFHLIVFSSLLCFQIRAQAEPSGSVFFIDNPTRQ*IRT************SLLEVSAAVSVLLGFAPPASLSADGSSKLNEVLVPNPFDRPCAVFMLEVRGVGDPKLTDDLDNTQLFDAYHSKIIPGPRKADIQIPDEDQVSVVFLDELSEDRTDKEIRNFASWLGGSYVADTLEPLNGELIIPVADGDHVKLHMSKKAEKDFALKLLVLSQNIKRAVDVHEHLAQSIRRPAELMMGSFDGIKALQEQYGLGQQGMKILLATLSRIFDSLQTAYEGQIVGVVFFNETPSPQSESVLNLMYTSRPSPRMLAETEGSRNATLAAAEVLLVRRTLAWLTGIILIIATLFGIYFLLNMPLTRDTLLYSNV***
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiii
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NFLLLVKPQIRLCFVTMDFPTRRIFHLIVFSSLLCFQIRAQAEPSGSVFFIDNPTRQFIRTPSQNDVAQSRSMSLLEVSAAVSVLLGFAPPASLSADGSSKLNEVLVPNPFDRPCAVFMLEVRGVGDPKLTDDLDNTQLFDAYHSKIIPGPRKADIQIPDEDQVSVVFLDELSEDRTDKEIRNFASWLGGSYVADTLEPLNGELIIPVADGDHVKLHMSKKAEKDFALKLLVLSQNIKRAVDVHEHLAQSIRRPAELMMGSFDGIKALQEQYGLGQQGMKILLATLSRIFDSLQTAYEGQIVGVVFFNETPSPQSESVLNLMYTSRPSPRMLAETEGSRNATLAAAEVLLVRRTLAWLTGIILIIATLFGIYFLLNMPLTRDTLLYSNVKLD
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query392
255554150369 PMP, putative [Ricinus communis] gi|2235 0.936 0.994 0.579 1e-116
224075619372 predicted protein [Populus trichocarpa] 0.938 0.989 0.594 1e-114
224053422372 predicted protein [Populus trichocarpa] 0.941 0.991 0.612 1e-113
359477889380 PREDICTED: uncharacterized protein LOC10 0.897 0.926 0.574 1e-101
358249234369 uncharacterized protein LOC100817223 pre 0.928 0.986 0.530 1e-100
359807490369 uncharacterized protein LOC100813012 pre 0.928 0.986 0.530 5e-99
15230073364 putative type 1 membrane protein [Arabid 0.920 0.991 0.518 3e-90
449432430392 PREDICTED: uncharacterized protein LOC10 0.966 0.966 0.486 6e-90
357448563373 hypothetical protein MTR_2g030560 [Medic 0.931 0.978 0.518 3e-89
357448565371 hypothetical protein MTR_2g030560 [Medic 0.926 0.978 0.513 2e-88
>gi|255554150|ref|XP_002518115.1| PMP, putative [Ricinus communis] gi|223542711|gb|EEF44248.1| PMP, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 219/378 (57%), Positives = 281/378 (74%), Gaps = 11/378 (2%)

Query: 17  MDFPTRRIFHLIVFSSLLCFQIRAQAEPSGSVFFIDNPTRQFIRTPSQNDVAQSRSMSLL 76
           MDF  R +F+L++ SSL C  + +  E +GS+ FID  + Q++R    NDV QSR M+ +
Sbjct: 1   MDFQIRSVFNLLILSSLFC-SLASAKERTGSILFIDGNSHQYLR----NDVVQSRLMTPV 55

Query: 77  EVSAAVSVLLGFAPPASLSADGSSKLNEVLVPNPFDRPCAVFMLEVRGVGDPKLTDDLDN 136
           EV AAVSVLLGFAPP +LSA GSSKLNEVL+PNPFDRP AVF+LEV GV D   ++++ +
Sbjct: 56  EVGAAVSVLLGFAPPVTLSAAGSSKLNEVLMPNPFDRPGAVFLLEVTGVNDLVASENVMS 115

Query: 137 TQLFDAYHSKIIPGPRKADIQIPDEDQVSVVFLDELSEDRTDKEIRNFASWLGGSYVADT 196
           +   +A+  K      KA I++P E +VSV+ LDE   D TDKE+ +  SWLGGSY+ + 
Sbjct: 116 S---NAFKRKFALDSDKAQIELPGE-EVSVISLDEKLGDFTDKELSDLVSWLGGSYIVNG 171

Query: 197 LEPLNGELIIPVADGDHVKLHMSKKAEKDFALKLLVLSQNIKRAVDVHEHLAQSIRRPAE 256
           LE LNGELIIP+A G ++KLHMSKKA+++F   LL L  N KRA+++HE L+Q+I  PAE
Sbjct: 172 LESLNGELIIPLASGANLKLHMSKKADREFIESLLTLFHNSKRAIELHEDLSQAIHGPAE 231

Query: 257 LMMGSFDGIKALQEQYG--LGQQGMKILLATLSRIFDSLQTAYEGQIVGVVFFNETPSPQ 314
           L+MG F GIKALQEQYG  + QQG+++L+ATLS++ DS Q AY+GQIVGV+  NE  + +
Sbjct: 232 LIMGHFHGIKALQEQYGREVVQQGLELLVATLSKMVDSFQVAYKGQIVGVIISNERSTLE 291

Query: 315 SESVLNLMYTSRPSPRMLAETEGSRNATLAAAEVLLVRRTLAWLTGIILIIATLFGIYFL 374
           SE +LN+M+TS PS R LAE EGS     A  EV LVR+TLAWLTG+IL+I+TL GIY L
Sbjct: 292 SEKLLNVMFTSWPSARWLAEAEGSNATDTAIMEVALVRKTLAWLTGLILLISTLIGIYLL 351

Query: 375 LNMPLTRDTLLYSNVKLD 392
           LNMPLTRDTLLYSNVKLD
Sbjct: 352 LNMPLTRDTLLYSNVKLD 369




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224075619|ref|XP_002304710.1| predicted protein [Populus trichocarpa] gi|118488094|gb|ABK95867.1| unknown [Populus trichocarpa] gi|222842142|gb|EEE79689.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224053422|ref|XP_002297811.1| predicted protein [Populus trichocarpa] gi|222845069|gb|EEE82616.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359477889|ref|XP_002267189.2| PREDICTED: uncharacterized protein LOC100245241 [Vitis vinifera] gi|298205266|emb|CBI17325.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|358249234|ref|NP_001240015.1| uncharacterized protein LOC100817223 precursor [Glycine max] gi|255647811|gb|ACU24365.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|359807490|ref|NP_001241398.1| uncharacterized protein LOC100813012 precursor [Glycine max] gi|255635960|gb|ACU18326.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|15230073|ref|NP_189058.1| putative type 1 membrane protein [Arabidopsis thaliana] gi|4206765|gb|AAD11797.1| putative type 1 membrane protein [Arabidopsis thaliana] gi|11994235|dbj|BAB01357.1| unnamed protein product [Arabidopsis thaliana] gi|15450743|gb|AAK96643.1| AT3g24160/MUJ8_16 [Arabidopsis thaliana] gi|21537239|gb|AAM61580.1| type 1 membrane protein, putative [Arabidopsis thaliana] gi|22137144|gb|AAM91417.1| AT3g24160/MUJ8_16 [Arabidopsis thaliana] gi|332643343|gb|AEE76864.1| putative type 1 membrane protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449432430|ref|XP_004134002.1| PREDICTED: uncharacterized protein LOC101215254 [Cucumis sativus] gi|449487528|ref|XP_004157671.1| PREDICTED: uncharacterized LOC101215254 [Cucumis sativus] Back     alignment and taxonomy information
>gi|357448563|ref|XP_003594557.1| hypothetical protein MTR_2g030560 [Medicago truncatula] gi|355483605|gb|AES64808.1| hypothetical protein MTR_2g030560 [Medicago truncatula] Back     alignment and taxonomy information
>gi|357448565|ref|XP_003594558.1| hypothetical protein MTR_2g030560 [Medicago truncatula] gi|355483606|gb|AES64809.1| hypothetical protein MTR_2g030560 [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query392
TAIR|locus:2093706364 PMP "AT3G24160" [Arabidopsis t 0.920 0.991 0.491 5e-83
TAIR|locus:2093706 PMP "AT3G24160" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 832 (297.9 bits), Expect = 5.0e-83, P = 5.0e-83
 Identities = 183/372 (49%), Positives = 252/372 (67%)

Query:    23 RIFHLIVFSSLLCFQIRAQAEPSGSVFFIDNPTRQFIRTPSQNDVAQSRXXXXXXXXXXX 82
             + F++ V + LL    R +A  SGSVFFID    Q++R  S ++                
Sbjct:     2 KAFYVFVVALLLTLNYRGEA--SGSVFFIDGSNNQYLRPRSSSEALPM---SPVEISAAV 56

Query:    83 XXXXGFAPPASLSADGSSKLNEVLVPNPFDRPCAVFMLEVRGVGDPKLTDDLDNTQLFDA 142
                 GFAP A+L+ADGSSKLN++L PNPF+RP A F+LE+ G  D  L     ++ L +A
Sbjct:    57 SALLGFAPSATLTADGSSKLNKILKPNPFERPRAAFVLEIAGADDMLLETSPSHSFLGNA 116

Query:   143 YHSKIIPGPRKADIQIPDEDQVSVVFLDELSEDRTDKEIRNFASWLGGSYVADTLEPLNG 202
               S I     KAD ++PD ++V VV ++E S D TDK+I +FASWLGGSYVA   EP +G
Sbjct:   117 IRSSIKSDSYKADTELPD-NEVVVVSVNEPSSDVTDKDINDFASWLGGSYVAGA-EPSSG 174

Query:   203 ELIIPVADGDHVKLHMSKKAEKDFALKLLVLSQNIKRAVDVHEHLAQSIRRPAELMMGSF 262
              L IP+A G +V+ ++ K+AE+ FAL LL L QNI++AV V++ L+  I R AEL +G F
Sbjct:   175 LLSIPLAGGANVEFNLEKEAERKFALNLLGLYQNIRQAVSVYDDLSHGIDRTAELTVGRF 234

Query:   263 DGIKALQEQYGLG--QQGMKILLATLSRIFDSLQTAYEGQIVGVVFFNETPSPQSESVLN 320
              GI AL ++YG G  +QGM +LL+TLS++F+ L+T+++GQIVGV+  +E  + +SE++LN
Sbjct:   235 GGIDALAQEYGQGMAKQGMDVLLSTLSKLFNLLETSHKGQIVGVIVLDERVNQESENLLN 294

Query:   321 LMYTSRPSPRMLAETEGSRNATLAAAEVLLVRRTLAWLTGIILIIATLFGIYFLLNMPLT 380
                +SR S R + E EG  +A + A EV+LVR TLAWLTGIIL+IAT+ G+YFL+NMPLT
Sbjct:   295 FG-SSRSSARSMVEVEGIPSAAIIA-EVILVRLTLAWLTGIILLIATILGVYFLMNMPLT 352

Query:   381 RDTLLYSNVKLD 392
             +DTLLYSNVKLD
Sbjct:   353 KDTLLYSNVKLD 364


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.138   0.398    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      392       377   0.00089  117 3  11 22  0.36    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  610 (65 KB)
  Total size of DFA:  212 KB (2118 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  30.39u 0.10s 30.49t   Elapsed:  00:00:01
  Total cpu time:  30.39u 0.10s 30.49t   Elapsed:  00:00:01
  Start:  Fri May 10 18:27:29 2013   End:  Fri May 10 18:27:30 2013


GO:0003674 "molecular_function" evidence=ND
GO:0008150 "biological_process" evidence=ND
GO:0005783 "endoplasmic reticulum" evidence=IDA
GO:0005774 "vacuolar membrane" evidence=IDA
GO:0016020 "membrane" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0000902 "cell morphogenesis" evidence=RCA
GO:0006623 "protein targeting to vacuole" evidence=RCA
GO:0006816 "calcium ion transport" evidence=RCA
GO:0007030 "Golgi organization" evidence=RCA
GO:0007033 "vacuole organization" evidence=RCA
GO:0009651 "response to salt stress" evidence=RCA
GO:0016049 "cell growth" evidence=RCA
GO:0048193 "Golgi vesicle transport" evidence=RCA

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
estExt_fgenesh4_pg.C_LG_III1491
SubName- Full=Putative uncharacterized protein; (373 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 392
KOG4737326 consensus ATPase membrane sector associated protei 100.0
PF0785098 Renin_r: Renin receptor-like protein; InterPro: IP 99.73
>KOG4737 consensus ATPase membrane sector associated protein [Energy production and conversion] Back     alignment and domain information
Probab=100.00  E-value=6.3e-44  Score=342.81  Aligned_cols=278  Identities=20%  Similarity=0.251  Sum_probs=231.8

Q ss_pred             CCCceEEEEeCCCCccccCCCchhhhhhcccChHHHHHHHHHHhCcCCCCCCCcCccCCCCCccCCCCCCCCceEEEEEE
Q 042655           43 EPSGSVFFIDNPTRQFIRTPSQNDVAQSRSMSLLEVSAAVSVLLGFAPPASLSADGSSKLNEVLVPNPFDRPCAVFMLEV  122 (392)
Q Consensus        43 ~~~gs~~fid~~~~~~lr~~~~~~~~~~~~~s~~ev~~vvSvlLGfsp~~~l~~~~sskw~gllipnpF~RPrAvv~v~V  122 (392)
                      .+.+|+-|=|++           +.-++     ..|+++....|||+++++++      |+||.+.||||||||+++|.|
T Consensus        23 ~~P~sl~F~~gn-----------~~l~~-----~~i~dv~~~smG~Svk~d~~------w~gl~v~D~F~rpRa~vmV~V   80 (326)
T KOG4737|consen   23 AAPASLKFPDGN-----------ATLKT-----TLISDVNENSMGFSVKEDLS------WPGLAVGDLFHRPRATVMVMV   80 (326)
T ss_pred             cCccceecCCCC-----------Ccccc-----eEchhHHHHhhhheeccccC------CCcccccccccCcccEEEEEE
Confidence            467788887765           33333     67899999999999997777      999999999999999999999


Q ss_pred             ccCCC-----------CCCCCCccchhhhhhccccCCCCCcccccccCCCCceEEEeccccc-cccchHHHHhhhhhcCC
Q 042655          123 RGVGD-----------PKLTDDLDNTQLFDAYHSKIIPGPRKADIQIPDEDQVSVVFLDELS-EDRTDKEIRNFASWLGG  190 (392)
Q Consensus       123 ~Gvds-----------l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~L~~ee~v~v~sl~e~~-~d~t~~~l~~~~s~lgg  190 (392)
                      .|+|-           +++.+++.+|++.|.+++.+.+++ ++..|+.-. +++++++.++. ||.  .|+.        
T Consensus        81 ~Gvd~~~~~G~v~Sy~l~~~~~~G~Ds~~n~I~~~~~e~~-~vv~~~~~~-~~~~~~~~~e~fdd~--vq~~--------  148 (326)
T KOG4737|consen   81 KGVDLALPPGSVISYPLENAVPFGLDSVANSIFSLFSEET-PVVLQLAPS-RVYAVGKANEVFDDL--VQLT--------  148 (326)
T ss_pred             eccccccCCCceeeeeccCccCcChhHHHHHHHHHhhhcC-Ceeecccch-hHHHhhhHHHHHHHH--HHHH--------
Confidence            99983           467789999999999999999988 667777433 79999888766 554  3555        


Q ss_pred             cccCCCcccCCCee-eeecCCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCceEEEEeccHHHHH
Q 042655          191 SYVADTLEPLNGEL-IIPVADGDHVKLHMSKKAEKDFALKLLVLSQNIKRAVDVHEHLAQSIRRPAELMMGSFDGIKALQ  269 (392)
Q Consensus       191 sy~~~~l~~~~~~l-~ipl~~g~s~~L~~skeaD~~Fl~EL~~L~~~I~~~v~~h~dls~~~~~~pdLy~~~f~GlkaL~  269 (392)
                          +++++++..+ +.|++     +|.+|+..|++|..|++ .+|+|.-+.+.|+|+  +.++.||+|.....|+.++.
T Consensus       149 ----kr~f~~~e~~a~~pl~-----sl~~~~gv~ll~~ad~q-~l~~ig~l~s~~~hl--ae~a~pd~~s~~~a~~d~I~  216 (326)
T KOG4737|consen  149 ----KRLFQENELLASYPLN-----SLSRNNGVDLLFLADLQ-VLHDIGSLGSTHKHL--AEDASPDLYSLELAGLDEIG  216 (326)
T ss_pred             ----HHhhhhhhhhhhcchh-----hhCcccccchhhhhhhh-hhhhhhhhhhHHHHH--HhhcCccHHHHHHHhHHHHH
Confidence                3778888888 88994     99999999999999996 559999999999999  79999999999999999999


Q ss_pred             HHhCCC----hhHHHHHHHHHHHHHHHHHHhhCCcE-EEEEEecCCCCCCccccccccccccCCcchhhhhcCccchhhh
Q 042655          270 EQYGLG----QQGMKILLATLSRIFDSLQTAYEGQI-VGVVFFNETPSPQSESVLNLMYTSRPSPRMLAETEGSRNATLA  344 (392)
Q Consensus       270 ~~YG~~----k~a~~lL~~aL~kl~dsl~~aY~G~i-VgvVt~~~~~~~~~~~~~~~~~~~~r~~R~L~e~~~~~n~~~~  344 (392)
                      ++||++    .+|.|++..|.+|+.++.+.-|+|.- |... + ++              +.|.+|   |..   +.+-.
T Consensus       217 kayGe~sv~~~~A~k~ls~A~~kl~~s~~i~~~~iq~v~t~-~-~t--------------~~r~~R---ea~---~lav~  274 (326)
T KOG4737|consen  217 KAYGEDSVQFLLASKILSGAAEKLTESREIPNHGIQKVDTK-S-KT--------------PTRLAR---EAL---QLAVP  274 (326)
T ss_pred             HhhccchHHHHHHHHHHHHHHHHHHHhhhCCCCCcEEEEee-c-cc--------------hhHHHH---Hhh---ceeee
Confidence            999999    79999999999999999999998877 5433 2 23              445566   322   23224


Q ss_pred             hhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeeeccc
Q 042655          345 AAEVLLVR-RTLAWLTGIILIIATLFGIYFLLNMPLTRDTLLYSNV  389 (392)
Q Consensus       345 ~~~~~~V~-n~llW~t~IiLlvatLl~i~~L~nMdpgRDSIIYr~v  389 (392)
                      |+.+|+|+ ||++|+ ||+|.++.|..+|.||+|||||||||||=+
T Consensus       275 y~sdYpviFni~Lw~-mvil~lali~i~y~ia~mDPg~DSIIYRMT  319 (326)
T KOG4737|consen  275 YSSDYPVIFNIFLWL-MVILVLALIYIVYGIASMDPGKDSIIYRMT  319 (326)
T ss_pred             ccCCccHHHHHHHHH-HHHHHHHHHHHHhhhhccCCCcceeEEEec
Confidence            55556655 999999 799999999999999999999999999943



>PF07850 Renin_r: Renin receptor-like protein; InterPro: IPR012493 The sequences featured in this family are similar to a region of the human renin receptor (Q8NG15 from SWISSPROT) that bears a putative transmembrane spanning segment [] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00