Citrus Sinensis ID: 042877

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90----
Protein Sequence
HGHHQHAPHSKSLSRDVRAARPKFYWERIPIMKRKGAETLQIAGSSLPDCSHACGSCSPCRLVMVSFVCASLEEAETCPMAYKCMCNNKSYPVP
Secondary Structure (PSIPRED)
ccccccccccccccHHHHcccccEEEEEccHHHcccccEEEEcccccccccccccccccccEEEEEEcccccccccccccEEEEcccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccEEEcccccHEcccHHHHccccEEEEEccccccccccccccccccEEEEEEEHHHHHccccccEEEEEEccccccccc
Coil and Loop (DISEMBL)
hghhqhaphskslsrdvraarpkfyweripimkrkGAETLQiagsslpdcshacgscspcrLVMVSFVCASleeaetcpmaykcmcnnksypvp
Flexible Loop (DISEMBL)
hghhqhaphskslsrdvraARPKFYWERIPIMKRKGAETLQIAGSSLPDCSHACGSCSPCRLVMVSFVCASLEEAETCPMAYKCMCNNKSYPVP
Low Complexity Region (SEG)
HGHHQHAPHSKSLSRDVRAARPKFYWERIPIMKRKGAETLQIAGSSLPDCSHACGSCSPCRLVMVSFVCASLEEAETCPMAYKCMCNNKSYPVP
Disordered region (IsUnstruct)
*********************PKFYWERIPIMKRKGAETLQIAGSSLPDCSHACGSCSPCRLVMVSFVCASLEEAETCPMAYKCMCN*******
Disordered Region (DISOPRED)
************************************************DCSHACGSCSPCRLVMVSFVCASLEEAETCPMAYKCMCNNKSYP**
Disordered Region (DISEMBL)
****************VRAARPKFYWERIPIMKRKGAETLQIAGSSLPDCSHACGSCSPCRLVMVSFVCASLEEAETCPMAYKCMCNNKSYPVP
Disordered Region (DISPRO)
***************DVRAARPKFYWERIPIMKRKGAETLQIAGSSLPDCSHACGSCSPCRLVMVSFVCASLEEAETCPMAYKCMCNNKSY***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
HGHHQHAPHSKSLSRDVRAARPKFYWERIPIMKRKGAETLQIAGSSLPDCSHACGSCSPCRLVMVSFVCASLEEAETCPMAYKCMCNNKSYPVP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	94	2.2.26 [Sep-21-2011]
Q8S8I4	104	Protein EPIDERMAL PATTERN	yes	no	0.659	0.596	0.854	6e-26
Q8LC53	120	Protein EPIDERMAL PATTERN	no	no	0.648	0.508	0.507	3e-10
C4B8C5	172	EPIDERMAL PATTERNING FACT	no	no	0.521	0.284	0.538	4e-10
Q1PEY6	156	EPIDERMAL PATTERNING FACT	no	no	0.553	0.333	0.442	0.0004

>sp|Q8S8I4|EPF1_ARATH Protein EPIDERMAL PATTERNING FACTOR 1 OS=Arabidopsis thaliana GN=EPF1 PE=2 SV=1

 Score =  115 bits (289), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 53/62 (85%), Positives = 59/62 (95%)

Query: 33  KRKGAETLQIAGSSLPDCSHACGSCSPCRLVMVSFVCASLEEAETCPMAYKCMCNNKSYP 92
           +R+  +T+Q+AGS LPDCSHACGSCSPCRLVMVSFVCAS+EEAETCPMAYKCMCNNKSYP
Sbjct: 43  QRRRPDTVQVAGSRLPDCSHACGSCSPCRLVMVSFVCASVEEAETCPMAYKCMCNNKSYP 102

Query: 93  VP 94
           VP
Sbjct: 103 VP 104

Controls stomatal patterning. Regulates asymmetric cell division during guard cell differentiation. Mediates stomatal development inhibition.
Arabidopsis thaliana (taxid: 3702)

>sp|Q8LC53|EPF2_ARATH Protein EPIDERMAL PATTERNING FACTOR 2 OS=Arabidopsis thaliana GN=EPF2 PE=2 SV=1

 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 33/65 (50%), Positives = 43/65 (66%), Gaps = 4/65 (6%)

Query: 31  IMKRKGAET-LQIAGSSLPDCSHACGSCSPCRLVMVSFVCASLEEAETCPMAYKCMCNNK 89
           I K  G E  +   GSSLPDCS+ACG+CSPC+ VM+SF C+    AE+C + Y+C C  +
Sbjct: 56  ISKNGGVEMEMYPTGSSLPDCSYACGACSPCKRVMISFECSV---AESCSVIYRCTCRGR 112

Query: 90  SYPVP 94
            Y VP
Sbjct: 113 YYHVP 117

Controls stomatal patterning. Regulates the number of cells that enter, and remain in, the stomatal lineage by inhibiting protodermal cells from adopting the meristemoid mother cell (MMC) fate in a non-cell-autonomous manner. Mediates stomatal development inhibition.

Arabidopsis thaliana (taxid: 3702)

>sp|C4B8C5|EPFL7_ARATH EPIDERMAL PATTERNING FACTOR-like protein 7 OS=Arabidopsis thaliana GN=EPFL7 PE=2 SV=1

 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 28/52 (53%), Positives = 39/52 (75%), Gaps = 3/52 (5%)

Query: 43  AGSSLPDCSHACGSCSPCRLVMVSFVCASLEEAETCPMAYKCMCNNKSYPVP 94
           +GSS+PDCS+ACG C PC+LV++S  C++   +E CP+ YKC+C  K Y VP
Sbjct: 121 SGSSIPDCSNACGPCKPCKLVVISSTCSA---SEACPLVYKCLCKGKYYHVP 169

Controls stomatal patterning.

Arabidopsis thaliana (taxid: 3702)

>sp|Q1PEY6|EPFL6_ARATH EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana GN=EPFL6 PE=2 SV=1

 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/52 (44%), Positives = 29/52 (55%)

Query: 40  LQIAGSSLPDCSHACGSCSPCRLVMVSFVCASLEEAETCPMAYKCMCNNKSY 91
           L+  GSS P CS  CG C+PC+ V V     +   AE  P A++C C NK Y
Sbjct: 103 LRGLGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCGNKLY 154

Controls stomatal patterning.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	94
255553829	124	conserved hypothetical protein [Ricinus	0.978	0.741	0.691	1e-29
224127148	119	predicted protein [Populus trichocarpa]	0.957	0.756	0.728	3e-29
297739245	259	unnamed protein product [Vitis vinifera]	0.957	0.347	0.680	3e-28
449438080	124	PREDICTED: protein EPIDERMAL PATTERNING	0.978	0.741	0.659	4e-28
224124560	62	predicted protein [Populus trichocarpa]	0.659	1.0	0.919	1e-26
297836862	105	hypothetical protein ARALYDRAFT_900467 [	0.659	0.590	0.854	3e-24
15226414	104	protein EPIDERMAL PATTERNING FACTOR 1 [A	0.659	0.596	0.854	3e-24
225461371	120	PREDICTED: protein EPIDERMAL PATTERNING	0.659	0.516	0.828	6e-23
255582467	108	conserved hypothetical protein [Ricinus	0.936	0.814	0.509	3e-20
224115002	63	predicted protein [Populus trichocarpa]	0.670	1.0	0.682	1e-17

>gi|255553829|ref|XP_002517955.1| conserved hypothetical protein [Ricinus communis] gi|223542937|gb|EEF44473.1| conserved hypothetical protein [Ricinus communis]

 Score =  134 bits (336), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 65/94 (69%), Positives = 75/94 (79%), Gaps = 2/94 (2%)

Query: 1   HGHHQHAPHSKSLSRDVRAARPKFYWERIPIMKRKGAETLQIAGSSLPDCSHACGSCSPC 60
           HGHH  +  +K+  R+V  A P  Y+      KR+G +T++IAGSSLPDCSHACGSCSPC
Sbjct: 33  HGHHHSSAQAKA--REVVVANPNNYYRERRPAKRRGGDTVEIAGSSLPDCSHACGSCSPC 90

Query: 61  RLVMVSFVCASLEEAETCPMAYKCMCNNKSYPVP 94
           RLVMVSFVC+SLEEAETCPMAYKCMC NKSYPVP
Sbjct: 91  RLVMVSFVCSSLEEAETCPMAYKCMCRNKSYPVP 124

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224127148|ref|XP_002329412.1| predicted protein [Populus trichocarpa] gi|222870462|gb|EEF07593.1| predicted protein [Populus trichocarpa]

 Score =  132 bits (332), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 67/92 (72%), Positives = 76/92 (82%), Gaps = 2/92 (2%)

Query: 3   HHQHAPHSKSLSRDVRAARPKFYWERIPIMKRKGAETLQIAGSSLPDCSHACGSCSPCRL 62
           HH H   ++   +D   A+P FY ER P  KR+G +T+QIAGSSLPDCSHACGSCSPCRL
Sbjct: 30  HHGHHHSTQPRIKDGTVAQPNFYRERWP-AKRRG-DTVQIAGSSLPDCSHACGSCSPCRL 87

Query: 63  VMVSFVCASLEEAETCPMAYKCMCNNKSYPVP 94
           VMVSF+CASLEEAETCPMAYKCMC+NKSYPVP
Sbjct: 88  VMVSFICASLEEAETCPMAYKCMCHNKSYPVP 119

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297739245|emb|CBI28896.3| unnamed protein product [Vitis vinifera]

 Score =  129 bits (323), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 64/94 (68%), Positives = 77/94 (81%), Gaps = 4/94 (4%)

Query: 1   HGHHQHAPHSKSLSRDVRAARPKFYWERIPIMKRKGAETLQIAGSSLPDCSHACGSCSPC 60
           HGHH HA  ++  ++     RP+ YWE+   MK+  ++TLQ+AGSSLPDCSHACGSC+PC
Sbjct: 170 HGHH-HA--TRPRTKQGTMVRPELYWEKRG-MKQGRSDTLQVAGSSLPDCSHACGSCTPC 225

Query: 61  RLVMVSFVCASLEEAETCPMAYKCMCNNKSYPVP 94
           RLVMVSFVCASL EAETCP+AYKCMC+NKSYPVP
Sbjct: 226 RLVMVSFVCASLAEAETCPIAYKCMCHNKSYPVP 259

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449438080|ref|XP_004136818.1| PREDICTED: protein EPIDERMAL PATTERNING FACTOR 2-like [Cucumis sativus] gi|449522994|ref|XP_004168510.1| PREDICTED: protein EPIDERMAL PATTERNING FACTOR 2-like [Cucumis sativus]

 Score =  128 bits (322), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 62/94 (65%), Positives = 72/94 (76%), Gaps = 2/94 (2%)

Query: 1   HGHHQHAPHSKSLSRDVRAARPKFYWERIPIMKRKGAETLQIAGSSLPDCSHACGSCSPC 60
           HGHH+    S S    +   + K     +  M RKG ET+++AGSSLPDCSHACGSCSPC
Sbjct: 33  HGHHRKGAASSSGKAAMVVVKEK--AAMMTRMGRKGTETVEVAGSSLPDCSHACGSCSPC 90

Query: 61  RLVMVSFVCASLEEAETCPMAYKCMCNNKSYPVP 94
           RLVM+SFVCASL+EAETCPMAY+CMCNNKSYPVP
Sbjct: 91  RLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP 124

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224124560|ref|XP_002319362.1| predicted protein [Populus trichocarpa] gi|222857738|gb|EEE95285.1| predicted protein [Populus trichocarpa]

 Score =  123 bits (309), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 57/62 (91%), Positives = 62/62 (100%)

Query: 33 KRKGAETLQIAGSSLPDCSHACGSCSPCRLVMVSFVCASLEEAETCPMAYKCMCNNKSYP 92
          KR+GA+T+QIAGSSLPDCSHACGSCSPCRLVMVSF+CASLEEAETCPMAYKCMC+NKSYP
Sbjct: 1  KRRGADTVQIAGSSLPDCSHACGSCSPCRLVMVSFICASLEEAETCPMAYKCMCDNKSYP 60

Query: 93 VP 94
          VP
Sbjct: 61 VP 62

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297836862|ref|XP_002886313.1| hypothetical protein ARALYDRAFT_900467 [Arabidopsis lyrata subsp. lyrata] gi|297332153|gb|EFH62572.1| hypothetical protein ARALYDRAFT_900467 [Arabidopsis lyrata subsp. lyrata]

 Score =  115 bits (289), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 53/62 (85%), Positives = 59/62 (95%)

Query: 33  KRKGAETLQIAGSSLPDCSHACGSCSPCRLVMVSFVCASLEEAETCPMAYKCMCNNKSYP 92
           +R+  +T+Q+AGS LPDCSHACGSCSPCRLVMVSFVCASL+EAETCPMAYKCMCNNKSYP
Sbjct: 44  QRRRPDTVQVAGSRLPDCSHACGSCSPCRLVMVSFVCASLQEAETCPMAYKCMCNNKSYP 103

Query: 93  VP 94
           VP
Sbjct: 104 VP 105

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15226414|ref|NP_179684.1| protein EPIDERMAL PATTERNING FACTOR 1 [Arabidopsis thaliana] gi|75160451|sp|Q8S8I4.1|EPF1_ARATH RecName: Full=Protein EPIDERMAL PATTERNING FACTOR 1; Flags: Precursor gi|20197702|gb|AAM15214.1| predicted protein [Arabidopsis thaliana] gi|330251996|gb|AEC07090.1| protein EPIDERMAL PATTERNING FACTOR 1 [Arabidopsis thaliana]

 Score =  115 bits (289), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 53/62 (85%), Positives = 59/62 (95%)

Query: 33  KRKGAETLQIAGSSLPDCSHACGSCSPCRLVMVSFVCASLEEAETCPMAYKCMCNNKSYP 92
           +R+  +T+Q+AGS LPDCSHACGSCSPCRLVMVSFVCAS+EEAETCPMAYKCMCNNKSYP
Sbjct: 43  QRRRPDTVQVAGSRLPDCSHACGSCSPCRLVMVSFVCASVEEAETCPMAYKCMCNNKSYP 102

Query: 93  VP 94
           VP
Sbjct: 103 VP 104

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225461371|ref|XP_002284728.1| PREDICTED: protein EPIDERMAL PATTERNING FACTOR 1 [Vitis vinifera] gi|302143049|emb|CBI20344.3| unnamed protein product [Vitis vinifera]

 Score =  111 bits (277), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 53/64 (82%), Positives = 60/64 (93%), Gaps = 2/64 (3%)

Query: 31  IMKRKGAETLQIAGSSLPDCSHACGSCSPCRLVMVSFVCASLEEAETCPMAYKCMCNNKS 90
           +M+R  A+TL+ AGSSLPDCSHACGSCSPCRLVMVSFVCASL EAETCP++YKCMCN+KS
Sbjct: 59  LMRR--ADTLEDAGSSLPDCSHACGSCSPCRLVMVSFVCASLAEAETCPISYKCMCNSKS 116

Query: 91  YPVP 94
           YPVP
Sbjct: 117 YPVP 120

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255582467|ref|XP_002532020.1| conserved hypothetical protein [Ricinus communis] gi|223528315|gb|EEF30359.1| conserved hypothetical protein [Ricinus communis]

 Score =  102 bits (254), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 54/106 (50%), Positives = 70/106 (66%), Gaps = 18/106 (16%)

Query: 1   HGHHQHAPHSKSLSRDVRAARPKFYW-----------ERIPIMKRKGAETLQIAGSSLPD 49
           HGH+ H        R+++ ARP+                  +M+ + A  LQIAGS LPD
Sbjct: 9   HGHNNHG------QRELKPARPRTNNPSSSNIAEPSDSEGEMMEERNAHPLQIAGSRLPD 62

Query: 50  CSHACGSCSPCRLVMVSFVCASLEE-AETCPMAYKCMCNNKSYPVP 94
           CSHACGSCSPC+LV+VS +CA+L + AETCP++Y+CMCNNKSYPVP
Sbjct: 63  CSHACGSCSPCKLVIVSSLCAALSQAAETCPVSYRCMCNNKSYPVP 108

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224115002|ref|XP_002316914.1| predicted protein [Populus trichocarpa] gi|222859979|gb|EEE97526.1| predicted protein [Populus trichocarpa]

 Score = 93.6 bits (231), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 43/63 (68%), Positives = 52/63 (82%)

Query: 32 MKRKGAETLQIAGSSLPDCSHACGSCSPCRLVMVSFVCASLEEAETCPMAYKCMCNNKSY 91
          MK+ GA  LQIAGS LPDCSHACGSC+PC L +VS +C+SL ++E CP++YKCMC NK Y
Sbjct: 1  MKQNGAHPLQIAGSRLPDCSHACGSCTPCVLKIVSSLCSSLAQSEACPISYKCMCKNKYY 60

Query: 92 PVP 94
          PVP
Sbjct: 61 PVP 63

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	94
TAIR|locus:3436392	104	EPF1 "AT2G20875" [Arabidopsis	0.659	0.596	0.854	1.7e-27
TAIR|locus:505006168	120	EPF2 "AT1G34245" [Arabidopsis	0.648	0.508	0.507	2.1e-13
TAIR|locus:2065719	230	CHAL "AT2G30370" [Arabidopsis	0.627	0.256	0.419	2.3e-06
TAIR|locus:1009023326	109	CLL2 "AT4G14723" [Arabidopsis	0.510	0.440	0.395	3.9e-05
TAIR|locus:2094424	107	CLL1 "AT3G22820" [Arabidopsis	0.510	0.448	0.375	0.0001

TAIR|locus:3436392 EPF1 "AT2G20875" [Arabidopsis thaliana (taxid:3702)]

 Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
 Identities = 53/62 (85%), Positives = 59/62 (95%)

Query:    33 KRKGAETLQIAGSSLPDCSHACGSCSPCRLVMVSFVCASLEEAETCPMAYKCMCNNKSYP 92
             +R+  +T+Q+AGS LPDCSHACGSCSPCRLVMVSFVCAS+EEAETCPMAYKCMCNNKSYP
Sbjct:    43 QRRRPDTVQVAGSRLPDCSHACGSCSPCRLVMVSFVCASVEEAETCPMAYKCMCNNKSYP 102

Query:    93 VP 94
             VP
Sbjct:   103 VP 104

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0010375 "stomatal complex patterning" evidence=IMP

GO:0010374 "stomatal complex development" evidence=IGI

GO:2000122 "negative regulation of stomatal complex development" evidence=IMP

TAIR|locus:505006168 EPF2 "AT1G34245" [Arabidopsis thaliana (taxid:3702)]

 Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
 Identities = 33/65 (50%), Positives = 43/65 (66%)

Query:    31 IMKRKGAET-LQIAGSSLPDCSHACGSCSPCRLVMVSFVCASLEEAETCPMAYKCMCNNK 89
             I K  G E  +   GSSLPDCS+ACG+CSPC+ VM+SF C+    AE+C + Y+C C  +
Sbjct:    56 ISKNGGVEMEMYPTGSSLPDCSYACGACSPCKRVMISFECSV---AESCSVIYRCTCRGR 112

Query:    90 SYPVP 94
              Y VP
Sbjct:   113 YYHVP 117

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0010052 "guard cell differentiation" evidence=IMP

GO:0010374 "stomatal complex development" evidence=IMP

GO:0048730 "epidermis morphogenesis" evidence=IMP

GO:2000122 "negative regulation of stomatal complex development" evidence=IMP

TAIR|locus:2065719 CHAL "AT2G30370" [Arabidopsis thaliana (taxid:3702)]

 Score = 112 (44.5 bits), Expect = 2.3e-06, P = 2.3e-06
 Identities = 26/62 (41%), Positives = 33/62 (53%)

Query:    33 KRKGAETLQIA---GSSLPDCSHACGSCSPCRLVMVSFVCASLEEAETCPMAYKCMCNNK 89
             + K AE  +I    GSS P CS  CG C+PC+ V V     +   AE  P A++C C NK
Sbjct:   167 RSKEAELRRILRGLGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCGNK 226

Query:    90 SY 91
              Y
Sbjct:   227 LY 228

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:2000122 "negative regulation of stomatal complex development" evidence=IGI;IMP

TAIR|locus:1009023326 CLL2 "AT4G14723" [Arabidopsis thaliana (taxid:3702)]

 Score = 97 (39.2 bits), Expect = 3.9e-05, P = 3.9e-05
 Identities = 19/48 (39%), Positives = 23/48 (47%)

Query:    44 GSSLPDCSHACGSCSPCRLVMVSFVCASLEEAETCPMAYKCMCNNKSY 91
             GSS P C   CG C PC+ V V          E  P A++C C NK +
Sbjct:    60 GSSPPTCRSKCGKCQPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLF 107

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0010052 "guard cell differentiation" evidence=IMP

GO:0010374 "stomatal complex development" evidence=IMP

TAIR|locus:2094424 CLL1 "AT3G22820" [Arabidopsis thaliana (taxid:3702)]

 Score = 93 (37.8 bits), Expect = 0.00010, P = 0.00010
 Identities = 18/48 (37%), Positives = 23/48 (47%)

Query:    44 GSSLPDCSHACGSCSPCRLVMVSFVCASLEEAETCPMAYKCMCNNKSY 91
             GS  P C   CG C PC+ V V      +   E  P A++C C NK +
Sbjct:    58 GSVPPMCRLKCGKCEPCKAVHVPIQPGLIMPLEYYPEAWRCKCGNKLF 105


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.131   0.444    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       94        94   0.00091  102 3  11 22  0.47    29
                                                     29  0.42    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  579 (62 KB)
  Total size of DFA:  130 KB (2082 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.34u 0.14s 11.48t   Elapsed:  00:00:01
  Total cpu time:  11.34u 0.14s 11.48t   Elapsed:  00:00:01
  Start:  Sat May 11 06:18:45 2013   End:  Sat May 11 06:18:46 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0010052 "guard cell differentiation" evidence=IMP

GO:0010374 "stomatal complex development" evidence=IMP

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8S8I4	EPF1_ARATH	No assigned EC number	0.8548	0.6595	0.5961	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	94
PLN03207	113	stomagen; Provisional	95.36

>PLN03207 stomagen; Provisional

Probab=95.36  E-value=0.011  Score=42.54  Aligned_cols=45  Identities=29%  Similarity=0.695  Sum_probs=36.1

Q ss_pred             eeccCCCCCccc-CCCCCCC-CCeeeEEeccCCCCCCCCcccceeeeecC
Q 042877           40 LQIAGSSLPDCS-HACGSCS-PCRLVMVSFVCASLEEAETCPMAYKCMCN   87 (94)
Q Consensus        40 ~~~iGS~PP~C~-~KC~~C~-PC~aVqVp~~~~~~~~seYyPl~WKCkCg   87 (94)
                      +..|||+-|.|. |-|.+|. -|.+.|||+.....-++.|   -+||-|+
T Consensus        66 r~~igs~aptctynecrgcr~kc~~eqvpv~~~dp~nsay---hy~cvch  112 (113)
T PLN03207         66 RLMIGSTAPTCTYNECRGCRYKCRAEQVPVEGNDPINSAY---HYKCVCH  112 (113)
T ss_pred             hhhhcCcCCccccccccCccccccceeccccCCCCCcccc---ccccCCC
Confidence            458999999997 6899997 4999999998776555555   4778775

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	94
2liy_A	45	Epidermal patterning factor-like protein 9; plant	97.22

>2liy_A Epidermal patterning factor-like protein 9; plant peptide hormone, EPFL family, stomatal density, positi regulator, hormone; NMR {Arabidopsis thaliana}

Probab=97.22  E-value=0.00033  Score=42.46  Aligned_cols=42  Identities=29%  Similarity=0.731  Sum_probs=35.8

Q ss_pred             cCCCCCccc-CCCCCCCC-CeeeEEeccCCCCCCCCcccceeeeecC
Q 042877           43 AGSSLPDCS-HACGSCSP-CRLVMVSFVCASLEEAETCPMAYKCMCN   87 (94)
Q Consensus        43 iGS~PP~C~-~KC~~C~P-C~aVqVp~~~~~~~~seYyPl~WKCkCg   87 (94)
                      |||+-|.|. |-|.+|.. |.+.|||+..+...++.|   -|||.|+
T Consensus         1 igS~APtCTYNECrgCr~~C~aeqvPvd~~dP~~SAY---hY~CvCh   44 (45)
T 2liy_A            1 IGSTAPTCTYNECRGCRYKCRAEQVPVEGNDPINSAY---HYRCVCH   44 (45)
T ss_dssp             CCSCTTTTCGGGGTTCCSEEEEEEEESSCSSSCSCCE---EEEEEEE
T ss_pred             CCccCCceeehhhcCcccccceeeccccCCCcccchh---eeEeEec
Confidence            799999997 68999975 999999998877667777   4899985

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00