Citrus Sinensis ID: 042954
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 720 | 2.2.26 [Sep-21-2011] | |||||||
| Q689G6 | 623 | Two-component response re | yes | no | 0.805 | 0.930 | 0.362 | 2e-85 | |
| Q6LA42 | 558 | Two-component response re | yes | no | 0.281 | 0.363 | 0.607 | 8e-66 | |
| Q8L500 | 468 | Two-component response re | no | no | 0.219 | 0.337 | 0.712 | 2e-63 | |
| Q10N34 | 767 | Two-component response re | no | no | 0.201 | 0.189 | 0.579 | 2e-47 | |
| A2XFB7 | 767 | Two-component response re | N/A | no | 0.201 | 0.189 | 0.579 | 2e-47 | |
| A2YQ93 | 742 | Two-component response re | N/A | no | 0.181 | 0.176 | 0.580 | 4e-45 | |
| Q0D3B6 | 742 | Two-component response re | no | no | 0.181 | 0.176 | 0.580 | 5e-45 | |
| Q93WK5 | 727 | Two-component response re | no | no | 0.206 | 0.204 | 0.506 | 6e-41 | |
| Q689G9 | 518 | Two-component response re | no | no | 0.258 | 0.359 | 0.340 | 4e-27 | |
| Q9LKL2 | 618 | Two-component response re | no | no | 0.187 | 0.218 | 0.392 | 3e-26 |
| >sp|Q689G6|PRR95_ORYSJ Two-component response regulator-like PRR95 OS=Oryza sativa subsp. japonica GN=PRR95 PE=2 SV=1 | Back alignment and function desciption |
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Score = 317 bits (813), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 247/681 (36%), Positives = 334/681 (49%), Gaps = 101/681 (14%)
Query: 31 TRWESFLPRMVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDL 90
+R LPRM +RVLL E DDSTR II ALLRKCGYRVAA DG+ AW+ LK + +IDL
Sbjct: 32 SRETRMLPRMPVRVLLAEGDDSTRHIICALLRKCGYRVAAASDGVKAWDILKEKSFNIDL 91
Query: 91 VLTEVELPSISGFALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRR 150
VLTEVELP +SGF LL+ +MEHD CKNIPVIMMS +DS+SMV KCMLKGAADFL+KP+R+
Sbjct: 92 VLTEVELPLMSGFLLLSTIMEHDACKNIPVIMMSSNDSVSMVFKCMLKGAADFLVKPIRK 151
Query: 151 NELRNLWQHVWRRHSLLGGHVPQNLHDVYHKGGAISENNMASSHSSDYAASSQKNKGSEK 210
NELRNLWQHVWR+ G + DV H E+N+ H + +E
Sbjct: 152 NELRNLWQHVWRKQLSSG------VLDVQHTQ---QEDNLTERHEQKTGVTK-----AEH 197
Query: 211 VSDAQSSRTSSPYLEAESAYMQNMQGLSQLKCRSASNTCSTDMERQNECAKLETESLMPE 270
V+ E+ +NM+ Q + + Q+ C + E E+
Sbjct: 198 VT--------------ENVVHKNMECSEQ------------ESDAQSSCTRSELEA---- 227
Query: 271 SKTGGASDELIVSEKLNRSGSEVAQCDDALRLEEDYGCVKTMPQGEGEGPKNDRINADIT 330
+ ++ L + + R S+ D E++ G T +G R D +
Sbjct: 228 -DSRQTNNLLEYKQPMGRHFSK----PDHKNTEKNGG---TKIHASNDGNLIPRREEDAS 279
Query: 331 YGIHGC-NDELIEPSSGAIDLIGTFDNHQEVPDKLSTPNDGIPDKLSTLHNR--TKKCEF 387
C ND E +S ++L+ DN Q+ N + ++ ++R KC
Sbjct: 280 LRRMTCSNDINCEKASRDMELVHIIDNQQK-------NNTHMEMDVARANSRGNDDKCFS 332
Query: 388 SP--HLELSLRKSFPSTSNDQGNDERHTLNHSAASAFSWYNNSKACPTPTSNSAELKDGS 445
P LELSLR+S S Q +ER TLNHS +S FS YN A T + A+ S
Sbjct: 333 IPAHQLELSLRRSDYSRLESQEKNERRTLNHSTSSPFSLYNCRTASSTINAGDAQACSTS 392
Query: 446 SKSDEILSNQLSENATGGFQPCCATSSNSRENMTSLVMGQSEQAAVAFAGPHLGFIPVPG 505
+ ++ EN G + S + RE Q V F +PV G
Sbjct: 393 ATHIDL------ENKNGDSK---TPSQDKRET------NQPPIRVVPFP------VPVGG 431
Query: 506 VRFDNIFAGYSHIFPSIFYTKSGLQPAWSPNSSHQKEHHRFPISASVHSNPDVHDSEQVY 565
+ FD S+FY +S P W+ +S ++ IS + P D++QV
Sbjct: 432 LTFDGQPFWNGAPVASLFYPQSA-PPIWNSKTSTWQDATTQAISLQ-QNGPKDTDTKQVE 489
Query: 566 GRTGEINHNSVDQTVCEQSKGRPLEQLRHGSPAGNQSSNSGLCNGLANNSSSGTYSRIDR 625
+ + + P ++ RH SP +S +S + + A + SG+
Sbjct: 490 NVEEQTARSHLSANRKHLRIEIPTDEPRHVSPTTGESGSSTVLDS-ARKTLSGSVCDSSS 548
Query: 626 NSSSAKASGTGTVPQNLNGCTLFIHDGFNGISARHSSQRDAALTKFRLKRKDRCYDKKVR 685
N A + VP+N +G RH SQR+AAL KFRLKRKDRC++KKVR
Sbjct: 549 NHMIAPTESSNVVPENPDGL-------------RHLSQREAALNKFRLKRKDRCFEKKVR 595
Query: 686 YQSRKSLAEQRPRVKGQFVRQ 706
YQSRK LAEQRPRVKGQFVRQ
Sbjct: 596 YQSRKLLAEQRPRVKGQFVRQ 616
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Controls photoperiodic flowering response. Seems to be one of the component of the circadian clock. Expression of several members of the ARR-like family is controlled by circadian rhythm. The particular coordinated sequential expression of PRR73, PRR37, PRR95, PRR59 and PPR1 result to circadian waves that may be at the basis of the endogenous circadian clock. Oryza sativa subsp. japonica (taxid: 39947) |
| >sp|Q6LA42|APRR5_ARATH Two-component response regulator-like APRR5 OS=Arabidopsis thaliana GN=APRR5 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q8L500|APRR9_ARATH Two-component response regulator-like APRR9 OS=Arabidopsis thaliana GN=APRR9 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q10N34|PRR73_ORYSJ Two-component response regulator-like PRR73 OS=Oryza sativa subsp. japonica GN=PRR73 PE=2 SV=1 | Back alignment and function description |
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| >sp|A2XFB7|PRR73_ORYSI Two-component response regulator-like PRR73 OS=Oryza sativa subsp. indica GN=PRR73 PE=2 SV=2 | Back alignment and function description |
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| >sp|A2YQ93|PRR37_ORYSI Two-component response regulator-like PRR37 OS=Oryza sativa subsp. indica GN=PRR37 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q0D3B6|PRR37_ORYSJ Two-component response regulator-like PRR37 OS=Oryza sativa subsp. japonica GN=PRR37 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q93WK5|APRR7_ARATH Two-component response regulator-like APRR7 OS=Arabidopsis thaliana GN=APRR7 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q689G9|PRR1_ORYSJ Two-component response regulator-like PRR1 OS=Oryza sativa subsp. japonica GN=PRR1 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q9LKL2|APRR1_ARATH Two-component response regulator-like APRR1 OS=Arabidopsis thaliana GN=APRR1 PE=1 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 720 | ||||||
| 147776739 | 991 | hypothetical protein VITISV_027904 [Viti | 0.969 | 0.704 | 0.532 | 0.0 | |
| 157399682 | 700 | pseudo-response regulator 9 [Castanea sa | 0.901 | 0.927 | 0.570 | 0.0 | |
| 224064372 | 694 | pseudo response regulator [Populus trich | 0.934 | 0.969 | 0.548 | 0.0 | |
| 224128053 | 717 | pseudo response regulator [Populus trich | 0.931 | 0.935 | 0.543 | 0.0 | |
| 255548045 | 697 | sensory transduction histidine kinase, p | 0.931 | 0.962 | 0.505 | 1e-171 | |
| 356504197 | 703 | PREDICTED: two-component response regula | 0.934 | 0.957 | 0.470 | 1e-154 | |
| 356571269 | 695 | PREDICTED: two-component response regula | 0.934 | 0.968 | 0.474 | 1e-154 | |
| 225453624 | 641 | PREDICTED: two-component response regula | 0.669 | 0.751 | 0.559 | 1e-147 | |
| 359490833 | 688 | PREDICTED: two-component response regula | 0.916 | 0.959 | 0.471 | 1e-145 | |
| 296089013 | 593 | unnamed protein product [Vitis vinifera] | 0.618 | 0.750 | 0.579 | 1e-140 |
| >gi|147776739|emb|CAN72415.1| hypothetical protein VITISV_027904 [Vitis vinifera] | Back alignment and taxonomy information |
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Score = 730 bits (1885), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/766 (53%), Positives = 502/766 (65%), Gaps = 68/766 (8%)
Query: 3 MGEVVVSSEGGMDIDLETEKDGSSEVV-----------RTRWESFLPRMVLRVLLVEADD 51
MGE VVSS+ M+++L+ E+ E+ RW FLPRMVLRVLLVE DD
Sbjct: 1 MGEAVVSSDEVMEVELQEEEKRVXEMEGKEEKEKSSSGVVRWGRFLPRMVLRVLLVEPDD 60
Query: 52 STRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGFALLTLVME 111
STRQII+ALLRKC Y+VAAV DGL AWE LK P ++DL+LTEVELPSISGFALL+L+ME
Sbjct: 61 STRQIIAALLRKCSYKVAAVSDGLKAWEALKGEPQNVDLILTEVELPSISGFALLSLIME 120
Query: 112 HDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRRHSLLGGHV 171
D+CK IPVIMMS HDSISMVLKCMLKGAADFL+KPVR+NEL NLWQHVWRRH+ GHV
Sbjct: 121 DDICKKIPVIMMSSHDSISMVLKCMLKGAADFLVKPVRKNELXNLWQHVWRRHAPTXGHV 180
Query: 172 PQNLHDVYHKGGAISENNMASSHSSDYAASSQKNKG-SEKVSDAQSSRTSSPYLEAESAY 230
QNL +K S NN AS+HSSDY S+QK K SEK SD QSS T +PYLEAESAY
Sbjct: 181 SQNLSIAQNKVEVSSXNNTASNHSSDYVVSAQKKKECSEKGSDVQSSST-TPYLEAESAY 239
Query: 231 MQNMQGLSQLKCRSASNTCSTDMERQNECAKLETESLMPESKTG---------------- 274
M+NMQG SQLKCRS SN + ++ + +C +L+ E ES TG
Sbjct: 240 MENMQGFSQLKCRSVSNLSNEEIRKHEDCIELDKEPDRLESLTGGISNILLSFGFFEFLF 299
Query: 275 -------GASDELIVSEKLNRSGSEVAQCDD-----ALRLEEDYGCVKTMPQGEGEGPKN 322
GASD+L+V+ K+ GSEVA ++ A R EE + K + G+G GP +
Sbjct: 300 YSATLIYGASDKLLVAGKIITLGSEVAPGNEGYHSAAFRWEESHCRAKRVTSGDGVGPAS 359
Query: 323 DRINADITYGIHGCNDELIEPSSGAIDLIGTFDNHQEVPDKLSTPNDGIPDKLSTLHNRT 382
N DIT HGCN++ IEPSSGAIDLI TFDN+ + ++ S+ NDGI
Sbjct: 360 HIENTDITGENHGCNEKWIEPSSGAIDLISTFDNYPKDRNQFSSSNDGI----------- 408
Query: 383 KKCEFSPHLELSLRKSFPSTSNDQGNDERHTLNHSAASAFSWYNNSKAC----PTPTSNS 438
K F+P LELSLR+ P +S + G+DERHTLNHS +SAFSWYNN K+ PT N
Sbjct: 409 SKDGFAPQLELSLRRFQPCSSKNHGSDERHTLNHSNSSAFSWYNNGKSLQPLFPTSAINC 468
Query: 439 AELKDGSSKSDEILSNQLSENATGGFQPCCATSSNSRENMTSLVMGQSEQAAVAFAGPHL 498
+ELK+ +S S E L NQL E+ G + C A S ++ NMT+LVMGQS QA AF L
Sbjct: 469 SELKEDASYSHERLFNQLPESTVGTSERCGAALSVTQGNMTTLVMGQSNQAGAAFPTSQL 528
Query: 499 GFIPVPGVRFDNIFAGYSHIFPSIFYTKSGLQPAWSPNSSHQKEHHRFPISASVHSNPDV 558
G IPV GVRFD+ AGY H FP IF+T+ GL P WSP S+ Q+E F S+S++ NP++
Sbjct: 529 GLIPVQGVRFDSSXAGYGHXFPPIFHTQXGLPPIWSPKSAWQREQSHFSTSSSLYYNPEI 588
Query: 559 HDSEQVYGRTGEINHNSVDQTVCEQSKG-RPLEQLRHGSPAGNQSSNSGLCNGLANNSSS 617
EQ + NS DQTV EQ P+E+L HGSP QS++S LCNG+ ++ SS
Sbjct: 589 QSLEQ-----DCLTFNSTDQTVHEQENNLEPMEELSHGSPVAGQSASSSLCNGVVSHLSS 643
Query: 618 ----GTYSRIDRNSSSAKASGTGTVPQNLNGCTLFIHDGFNGISARHSSQRDAALTKFRL 673
G +R D N +S A T P+++N L +D G+ + HS+QR+AAL KFRL
Sbjct: 644 SVHGGICNRNDGNPTSNGAVVRTTAPESVNDEGLSNNDALKGMDSHHSTQREAALMKFRL 703
Query: 674 KRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDANADGC 719
KRKDRC++KKVRYQSRK LAEQRPRVKGQFVRQV+ +T ADGC
Sbjct: 704 KRKDRCFEKKVRYQSRKRLAEQRPRVKGQFVRQVQTDT--PTADGC 747
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|157399682|gb|ABV53465.1| pseudo-response regulator 9 [Castanea sativa] | Back alignment and taxonomy information |
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| >gi|224064372|ref|XP_002301443.1| pseudo response regulator [Populus trichocarpa] gi|222843169|gb|EEE80716.1| pseudo response regulator [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|224128053|ref|XP_002320232.1| pseudo response regulator [Populus trichocarpa] gi|222861005|gb|EEE98547.1| pseudo response regulator [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|255548045|ref|XP_002515079.1| sensory transduction histidine kinase, putative [Ricinus communis] gi|223545559|gb|EEF47063.1| sensory transduction histidine kinase, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|356504197|ref|XP_003520885.1| PREDICTED: two-component response regulator-like PRR95-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|356571269|ref|XP_003553801.1| PREDICTED: two-component response regulator-like PRR95-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|225453624|ref|XP_002266192.1| PREDICTED: two-component response regulator-like APRR5-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|359490833|ref|XP_003634174.1| PREDICTED: two-component response regulator-like APRR5-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|296089013|emb|CBI38716.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 720 | ||||||
| TAIR|locus:2044376 | 468 | PRR9 "pseudo-response regulato | 0.222 | 0.341 | 0.709 | 5.8e-84 | |
| TAIR|locus:2151206 | 727 | PRR7 "pseudo-response regulato | 0.840 | 0.832 | 0.281 | 2.9e-38 | |
| TAIR|locus:2163198 | 618 | TOC1 "TIMING OF CAB EXPRESSION | 0.187 | 0.218 | 0.392 | 1.1e-34 | |
| TAIR|locus:2062749 | 183 | AT2G46670 "AT2G46670" [Arabido | 0.068 | 0.267 | 0.836 | 1.6e-18 | |
| TAIR|locus:2116587 | 552 | RR10 "response regulator 10" [ | 0.168 | 0.219 | 0.412 | 2.8e-18 | |
| TAIR|locus:2040194 | 596 | RR12 "response regulator 12" [ | 0.162 | 0.196 | 0.426 | 1.1e-17 | |
| TAIR|locus:2130095 | 664 | RR2 "response regulator 2" [Ar | 0.230 | 0.25 | 0.353 | 3.7e-16 | |
| TAIR|locus:2093668 | 690 | RR1 "response regulator 1" [Ar | 0.163 | 0.171 | 0.439 | 2e-15 | |
| TAIR|locus:2008585 | 521 | ARR11 "response regulator 11" | 0.161 | 0.222 | 0.416 | 9.8e-15 | |
| UNIPROTKB|Q4GZK8 | 131 | rr3 "Type A response regulator | 0.170 | 0.938 | 0.370 | 2.1e-14 |
| TAIR|locus:2044376 PRR9 "pseudo-response regulator 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 577 (208.2 bits), Expect = 5.8e-84, Sum P(3) = 5.8e-84
Identities = 117/165 (70%), Positives = 138/165 (83%)
Query: 3 MGEVVV-SSEGGMDIDLETEKDGSSEVVRTRWESFLPRMVLRVLLVEADDSTRQIISALL 61
MGE+VV SS+ GM+ K SSEVV+ WE +LP+ VLRVLLVE+D STRQII+ALL
Sbjct: 1 MGEIVVLSSDDGMETIKNRVK--SSEVVQ--WEKYLPKTVLRVLLVESDYSTRQIITALL 56
Query: 62 RKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVI 121
RKC Y+V AV DGLAAWE LK + H+IDL+LTE++LPSISGFALL LVMEH+ CKNIPVI
Sbjct: 57 RKCCYKVVAVSDGLAAWEVLKEKSHNIDLILTELDLPSISGFALLALVMEHEACKNIPVI 116
Query: 122 MMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRRHSL 166
MMS DSI MVLKCML+GAAD+LIKP+R+NEL+NLWQHVWRR +L
Sbjct: 117 MMSSQDSIKMVLKCMLRGAADYLIKPMRKNELKNLWQHVWRRLTL 161
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| TAIR|locus:2151206 PRR7 "pseudo-response regulator 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2163198 TOC1 "TIMING OF CAB EXPRESSION 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2062749 AT2G46670 "AT2G46670" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2116587 RR10 "response regulator 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2040194 RR12 "response regulator 12" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2130095 RR2 "response regulator 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2093668 RR1 "response regulator 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2008585 ARR11 "response regulator 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q4GZK8 rr3 "Type A response regulator 3" [Oryza sativa Indica Group (taxid:39946)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q689G6 | PRR95_ORYSJ | No assigned EC number | 0.3627 | 0.8055 | 0.9309 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | PtpRR6 | pseudo response regulator (694 aa) | ||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 720 | |||
| pfam00072 | 111 | pfam00072, Response_reg, Response regulator receiv | 4e-26 | |
| cd00156 | 113 | cd00156, REC, Signal receiver domain; originally t | 6e-26 | |
| COG0784 | 130 | COG0784, CheY, FOG: CheY-like receiver [Signal tra | 4e-23 | |
| pfam06203 | 45 | pfam06203, CCT, CCT motif | 2e-20 | |
| COG2204 | 464 | COG2204, AtoC, Response regulator containing CheY- | 7e-19 | |
| COG0745 | 229 | COG0745, OmpR, Response regulators consisting of a | 2e-18 | |
| COG3706 | 435 | COG3706, PleD, Response regulator containing a Che | 3e-12 | |
| COG3437 | 360 | COG3437, COG3437, Response regulator containing a | 1e-11 | |
| PRK11361 | 457 | PRK11361, PRK11361, acetoacetate metabolism regula | 2e-11 | |
| COG4566 | 202 | COG4566, TtrR, Response regulator [Signal transduc | 3e-11 | |
| COG2197 | 211 | COG2197, CitB, Response regulator containing a Che | 1e-10 | |
| smart00448 | 55 | smart00448, REC, cheY-homologous receiver domain | 2e-10 | |
| PLN03029 | 222 | PLN03029, PLN03029, type-a response regulator prot | 3e-10 | |
| PRK10365 | 441 | PRK10365, PRK10365, transcriptional regulatory pro | 7e-10 | |
| TIGR02154 | 226 | TIGR02154, PhoB, phosphate regulon transcriptional | 8e-10 | |
| CHL00148 | 240 | CHL00148, orf27, Ycf27; Reviewed | 2e-09 | |
| TIGR01818 | 463 | TIGR01818, ntrC, nitrogen regulation protein NR(I) | 3e-08 | |
| PRK11517 | 223 | PRK11517, PRK11517, transcriptional regulatory pro | 3e-08 | |
| PRK15479 | 221 | PRK15479, PRK15479, transcriptional regulatory pro | 6e-08 | |
| PRK00742 | 354 | PRK00742, PRK00742, chemotaxis-specific methyleste | 9e-08 | |
| PRK09581 | 457 | PRK09581, pleD, response regulator PleD; Reviewed | 1e-07 | |
| TIGR02956 | 968 | TIGR02956, TMAO_torS, TMAO reductase sytem sensor | 2e-07 | |
| PRK09390 | 202 | PRK09390, fixJ, response regulator FixJ; Provision | 4e-07 | |
| PRK11083 | 228 | PRK11083, PRK11083, DNA-binding response regulator | 2e-06 | |
| PRK10610 | 129 | PRK10610, PRK10610, chemotaxis regulatory protein | 2e-06 | |
| PRK10766 | 221 | PRK10766, PRK10766, DNA-binding transcriptional re | 3e-06 | |
| COG3947 | 361 | COG3947, COG3947, Response regulator containing Ch | 5e-06 | |
| COG4753 | 475 | COG4753, COG4753, Response regulator containing Ch | 6e-06 | |
| PRK15347 | 921 | PRK15347, PRK15347, two component system sensor ki | 7e-06 | |
| PRK10336 | 219 | PRK10336, PRK10336, DNA-binding transcriptional re | 9e-06 | |
| PRK15115 | 444 | PRK15115, PRK15115, response regulator GlrR; Provi | 1e-05 | |
| PRK10955 | 232 | PRK10955, PRK10955, DNA-binding transcriptional re | 1e-05 | |
| PRK10161 | 229 | PRK10161, PRK10161, transcriptional regulator PhoB | 2e-05 | |
| TIGR01387 | 218 | TIGR01387, cztR_silR_copR, heavy metal response re | 2e-05 | |
| COG2201 | 350 | COG2201, CheB, Chemotaxis response regulator conta | 2e-05 | |
| PRK10816 | 223 | PRK10816, PRK10816, DNA-binding transcriptional re | 3e-05 | |
| PRK09836 | 227 | PRK09836, PRK09836, DNA-binding transcriptional ac | 4e-05 | |
| COG3279 | 244 | COG3279, LytT, Response regulator of the LytR/AlgR | 7e-05 | |
| COG4565 | 224 | COG4565, CitB, Response regulator of citrate/malat | 1e-04 | |
| PRK10693 | 303 | PRK10693, PRK10693, response regulator of RpoS; Pr | 2e-04 | |
| PRK10923 | 469 | PRK10923, glnG, nitrogen regulation protein NR(I); | 3e-04 | |
| PRK12555 | 337 | PRK12555, PRK12555, chemotaxis-specific methyleste | 0.001 | |
| PRK13837 | 828 | PRK13837, PRK13837, two-component VirA-like sensor | 0.002 | |
| PRK13856 | 241 | PRK13856, PRK13856, two-component response regulat | 0.004 |
| >gnl|CDD|200976 pfam00072, Response_reg, Response regulator receiver domain | Back alignment and domain information |
|---|
Score = 103 bits (258), Expect = 4e-26
Identities = 38/112 (33%), Positives = 55/112 (49%), Gaps = 4/112 (3%)
Query: 44 VLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGF 103
VL+V+ D R+++ LL K GY VA DG A E LK DL+L ++ +P + G
Sbjct: 1 VLIVDDDPLIRELLRQLLEKEGYVVAEADDGEEALELLK--EKRPDLILLDIRMPGMDGL 58
Query: 104 ALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRN 155
LL + PVI+++ H ++ + GA DFL KP EL
Sbjct: 59 ELLRRIRRRP--PTTPVIVLTAHGDEEDAVEALKAGANDFLSKPFDPEELVA 108
|
This domain receives the signal from the sensor partner in bacterial two-component systems. It is usually found N-terminal to a DNA binding effector domain. Length = 111 |
| >gnl|CDD|238088 cd00156, REC, Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems; contains a phosphoacceptor site that is phosphorylated by histidine kinase homologs; usually found N-terminal to a DNA binding effector domain; forms homodimers | Back alignment and domain information |
|---|
| >gnl|CDD|223855 COG0784, CheY, FOG: CheY-like receiver [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >gnl|CDD|203407 pfam06203, CCT, CCT motif | Back alignment and domain information |
|---|
| >gnl|CDD|225114 COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >gnl|CDD|223816 COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription] | Back alignment and domain information |
|---|
| >gnl|CDD|226229 COG3706, PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >gnl|CDD|225971 COG3437, COG3437, Response regulator containing a CheY-like receiver domain and an HD-GYP domain [Transcription / Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >gnl|CDD|183099 PRK11361, PRK11361, acetoacetate metabolism regulatory protein AtoC; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|226932 COG4566, TtrR, Response regulator [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >gnl|CDD|225107 COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] | Back alignment and domain information |
|---|
| >gnl|CDD|214668 smart00448, REC, cheY-homologous receiver domain | Back alignment and domain information |
|---|
| >gnl|CDD|215544 PLN03029, PLN03029, type-a response regulator protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|182412 PRK10365, PRK10365, transcriptional regulatory protein ZraR; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|131209 TIGR02154, PhoB, phosphate regulon transcriptional regulatory protein PhoB | Back alignment and domain information |
|---|
| >gnl|CDD|214376 CHL00148, orf27, Ycf27; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|233585 TIGR01818, ntrC, nitrogen regulation protein NR(I) | Back alignment and domain information |
|---|
| >gnl|CDD|183172 PRK11517, PRK11517, transcriptional regulatory protein YedW; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|185376 PRK15479, PRK15479, transcriptional regulatory protein TctD; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|234828 PRK00742, PRK00742, chemotaxis-specific methylesterase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|236577 PRK09581, pleD, response regulator PleD; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|234070 TIGR02956, TMAO_torS, TMAO reductase sytem sensor TorS | Back alignment and domain information |
|---|
| >gnl|CDD|181815 PRK09390, fixJ, response regulator FixJ; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|236838 PRK11083, PRK11083, DNA-binding response regulator CreB; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|170568 PRK10610, PRK10610, chemotaxis regulatory protein CheY; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|182711 PRK10766, PRK10766, DNA-binding transcriptional regulator TorR; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|226456 COG3947, COG3947, Response regulator containing CheY-like receiver and SARP domains [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >gnl|CDD|227095 COG4753, COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >gnl|CDD|237951 PRK15347, PRK15347, two component system sensor kinase SsrA; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|182387 PRK10336, PRK10336, DNA-binding transcriptional regulator QseB; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|185070 PRK15115, PRK15115, response regulator GlrR; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|182864 PRK10955, PRK10955, DNA-binding transcriptional regulator CpxR; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|182277 PRK10161, PRK10161, transcriptional regulator PhoB; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|130454 TIGR01387, cztR_silR_copR, heavy metal response regulator | Back alignment and domain information |
|---|
| >gnl|CDD|225111 COG2201, CheB, Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain [Cell motility and secretion / Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >gnl|CDD|182755 PRK10816, PRK10816, DNA-binding transcriptional regulator PhoP; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|182102 PRK09836, PRK09836, DNA-binding transcriptional activator CusR; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|225818 COG3279, LytT, Response regulator of the LytR/AlgR family [Transcription / Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >gnl|CDD|226931 COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >gnl|CDD|182652 PRK10693, PRK10693, response regulator of RpoS; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|182842 PRK10923, glnG, nitrogen regulation protein NR(I); Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237135 PRK12555, PRK12555, chemotaxis-specific methylesterase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237526 PRK13837, PRK13837, two-component VirA-like sensor kinase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|172377 PRK13856, PRK13856, two-component response regulator VirG; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 720 | |||
| COG3437 | 360 | Response regulator containing a CheY-like receiver | 100.0 | |
| COG2204 | 464 | AtoC Response regulator containing CheY-like recei | 99.89 | |
| COG0745 | 229 | OmpR Response regulators consisting of a CheY-like | 99.85 | |
| COG4753 | 475 | Response regulator containing CheY-like receiver d | 99.82 | |
| COG4566 | 202 | TtrR Response regulator [Signal transduction mecha | 99.79 | |
| COG2197 | 211 | CitB Response regulator containing a CheY-like rec | 99.79 | |
| PRK11466 | 914 | hybrid sensory histidine kinase TorS; Provisional | 99.78 | |
| COG4565 | 224 | CitB Response regulator of citrate/malate metaboli | 99.77 | |
| PF00072 | 112 | Response_reg: Response regulator receiver domain; | 99.77 | |
| PRK15347 | 921 | two component system sensor kinase SsrA; Provision | 99.73 | |
| PF06203 | 45 | CCT: CCT motif; InterPro: IPR010402 The CCT (CONST | 99.73 | |
| PRK11091 | 779 | aerobic respiration control sensor protein ArcB; P | 99.72 | |
| TIGR02956 | 968 | TMAO_torS TMAO reductase sytem sensor TorS. This p | 99.72 | |
| PRK10046 | 225 | dpiA two-component response regulator DpiA; Provis | 99.71 | |
| PRK09959 | 1197 | hybrid sensory histidine kinase in two-component r | 99.69 | |
| PRK10841 | 924 | hybrid sensory kinase in two-component regulatory | 99.69 | |
| PRK11107 | 919 | hybrid sensory histidine kinase BarA; Provisional | 99.68 | |
| COG0784 | 130 | CheY FOG: CheY-like receiver [Signal transduction | 99.68 | |
| PLN03029 | 222 | type-a response regulator protein; Provisional | 99.67 | |
| PRK10161 | 229 | transcriptional regulator PhoB; Provisional | 99.64 | |
| PRK10816 | 223 | DNA-binding transcriptional regulator PhoP; Provis | 99.64 | |
| COG3706 | 435 | PleD Response regulator containing a CheY-like rec | 99.64 | |
| TIGR02154 | 226 | PhoB phosphate regulon transcriptional regulatory | 99.64 | |
| PRK09483 | 217 | response regulator; Provisional | 99.64 | |
| PRK10529 | 225 | DNA-binding transcriptional activator KdpE; Provis | 99.64 | |
| PRK10430 | 239 | DNA-binding transcriptional activator DcuR; Provis | 99.63 | |
| PRK10766 | 221 | DNA-binding transcriptional regulator TorR; Provis | 99.63 | |
| PRK10840 | 216 | transcriptional regulator RcsB; Provisional | 99.63 | |
| PRK10643 | 222 | DNA-binding transcriptional regulator BasR; Provis | 99.63 | |
| PRK09836 | 227 | DNA-binding transcriptional activator CusR; Provis | 99.63 | |
| COG4567 | 182 | Response regulator consisting of a CheY-like recei | 99.62 | |
| PRK10955 | 232 | DNA-binding transcriptional regulator CpxR; Provis | 99.61 | |
| PRK11083 | 228 | DNA-binding response regulator CreB; Provisional | 99.61 | |
| PRK11173 | 237 | two-component response regulator; Provisional | 99.61 | |
| PRK10336 | 219 | DNA-binding transcriptional regulator QseB; Provis | 99.61 | |
| PRK13837 | 828 | two-component VirA-like sensor kinase; Provisional | 99.6 | |
| PRK15115 | 444 | response regulator GlrR; Provisional | 99.6 | |
| PRK09468 | 239 | ompR osmolarity response regulator; Provisional | 99.6 | |
| PRK10701 | 240 | DNA-binding transcriptional regulator RstA; Provis | 99.6 | |
| TIGR03787 | 227 | marine_sort_RR proteobacterial dedicated sortase s | 99.59 | |
| PRK13856 | 241 | two-component response regulator VirG; Provisional | 99.59 | |
| COG3947 | 361 | Response regulator containing CheY-like receiver a | 99.59 | |
| PRK10923 | 469 | glnG nitrogen regulation protein NR(I); Provisiona | 99.58 | |
| PRK10365 | 441 | transcriptional regulatory protein ZraR; Provision | 99.58 | |
| PRK11517 | 223 | transcriptional regulatory protein YedW; Provision | 99.57 | |
| CHL00148 | 240 | orf27 Ycf27; Reviewed | 99.57 | |
| PRK13557 | 540 | histidine kinase; Provisional | 99.57 | |
| PRK09958 | 204 | DNA-binding transcriptional activator EvgA; Provis | 99.57 | |
| TIGR02915 | 445 | PEP_resp_reg putative PEP-CTERM system response re | 99.56 | |
| TIGR01387 | 218 | cztR_silR_copR heavy metal response regulator. Mem | 99.56 | |
| PRK11361 | 457 | acetoacetate metabolism regulatory protein AtoC; P | 99.55 | |
| KOG0519 | 786 | consensus Sensory transduction histidine kinase [S | 99.55 | |
| TIGR02875 | 262 | spore_0_A sporulation transcription factor Spo0A. | 99.54 | |
| PRK09581 | 457 | pleD response regulator PleD; Reviewed | 99.54 | |
| PRK14084 | 246 | two-component response regulator; Provisional | 99.52 | |
| PRK10360 | 196 | DNA-binding transcriptional activator UhpA; Provis | 99.51 | |
| PRK09935 | 210 | transcriptional regulator FimZ; Provisional | 99.51 | |
| PRK11697 | 238 | putative two-component response-regulatory protein | 99.49 | |
| PRK15479 | 221 | transcriptional regulatory protein TctD; Provision | 99.49 | |
| PRK09581 | 457 | pleD response regulator PleD; Reviewed | 99.48 | |
| TIGR01818 | 463 | ntrC nitrogen regulation protein NR(I). This model | 99.47 | |
| PRK10710 | 240 | DNA-binding transcriptional regulator BaeR; Provis | 99.47 | |
| PRK10403 | 215 | transcriptional regulator NarP; Provisional | 99.46 | |
| PRK10100 | 216 | DNA-binding transcriptional regulator CsgD; Provis | 99.45 | |
| PRK13435 | 145 | response regulator; Provisional | 99.44 | |
| PRK10651 | 216 | transcriptional regulator NarL; Provisional | 99.44 | |
| PRK09390 | 202 | fixJ response regulator FixJ; Provisional | 99.44 | |
| PRK10610 | 129 | chemotaxis regulatory protein CheY; Provisional | 99.43 | |
| PRK12555 | 337 | chemotaxis-specific methylesterase; Provisional | 99.43 | |
| PRK11475 | 207 | DNA-binding transcriptional activator BglJ; Provis | 99.42 | |
| PRK15411 | 207 | rcsA colanic acid capsular biosynthesis activation | 99.42 | |
| PRK00742 | 354 | chemotaxis-specific methylesterase; Provisional | 99.41 | |
| PRK15369 | 211 | two component system sensor kinase SsrB; Provision | 99.41 | |
| PRK13558 | 665 | bacterio-opsin activator; Provisional | 99.38 | |
| COG2201 | 350 | CheB Chemotaxis response regulator containing a Ch | 99.36 | |
| COG3707 | 194 | AmiR Response regulator with putative antiterminat | 99.25 | |
| PRK09191 | 261 | two-component response regulator; Provisional | 99.25 | |
| cd00156 | 113 | REC Signal receiver domain; originally thought to | 99.22 | |
| PRK10693 | 303 | response regulator of RpoS; Provisional | 99.12 | |
| PRK15029 | 755 | arginine decarboxylase; Provisional | 99.09 | |
| COG3279 | 244 | LytT Response regulator of the LytR/AlgR family [T | 99.06 | |
| COG2206 | 344 | c-di-GMP phosphodiesterase class II (HD-GYP domain | 98.8 | |
| PRK11107 | 919 | hybrid sensory histidine kinase BarA; Provisional | 98.26 | |
| PRK10618 | 894 | phosphotransfer intermediate protein in two-compon | 98.15 | |
| PRK12704 | 520 | phosphodiesterase; Provisional | 98.12 | |
| COG3706 | 435 | PleD Response regulator containing a CheY-like rec | 97.92 | |
| PF06490 | 109 | FleQ: Flagellar regulatory protein FleQ; InterPro: | 97.51 | |
| smart00448 | 55 | REC cheY-homologous receiver domain. CheY regulate | 97.45 | |
| PF03709 | 115 | OKR_DC_1_N: Orn/Lys/Arg decarboxylase, N-terminal | 96.87 | |
| cd02071 | 122 | MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 bin | 96.77 | |
| PRK02261 | 137 | methylaspartate mutase subunit S; Provisional | 96.45 | |
| TIGR00277 | 80 | HDIG uncharacterized domain HDIG. This domain is f | 96.31 | |
| PRK12703 | 339 | tRNA 2'-O-methylase; Reviewed | 96.02 | |
| TIGR00295 | 164 | conserved hypothetical protein TIGR00295. This set | 95.98 | |
| TIGR00640 | 132 | acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal | 95.79 | |
| PF01966 | 122 | HD: HD domain; InterPro: IPR006674 This domain is | 95.77 | |
| cd02067 | 119 | B12-binding B12 binding domain (B12-BD). This doma | 95.66 | |
| PF09425 | 27 | CCT_2: Divergent CCT motif; InterPro: IPR018467 Th | 95.48 | |
| PRK07152 | 342 | nadD putative nicotinate-nucleotide adenylyltransf | 95.2 | |
| PRK15399 | 713 | lysine decarboxylase LdcC; Provisional | 94.69 | |
| TIGR00488 | 158 | putative HD superfamily hydrolase of NAD metabolis | 94.52 | |
| KOG1601 | 340 | consensus GATA-4/5/6 transcription factors [Transc | 94.22 | |
| TIGR01501 | 134 | MthylAspMutase methylaspartate mutase, S subunit. | 94.13 | |
| PRK15400 | 714 | lysine decarboxylase CadA; Provisional | 94.06 | |
| cd00077 | 145 | HDc Metal dependent phosphohydrolases with conserv | 93.63 | |
| PRK00106 | 535 | hypothetical protein; Provisional | 93.52 | |
| TIGR03815 | 322 | CpaE_hom_Actino helicase/secretion neighborhood Cp | 93.18 | |
| COG1418 | 222 | Predicted HD superfamily hydrolase [General functi | 92.89 | |
| smart00471 | 124 | HDc Metal dependent phosphohydrolases with conserv | 91.92 | |
| cd02070 | 201 | corrinoid_protein_B12-BD B12 binding domain of cor | 91.87 | |
| TIGR03319 | 514 | YmdA_YtgF conserved hypothetical protein YmdA/YtgF | 91.87 | |
| PRK12705 | 508 | hypothetical protein; Provisional | 90.54 | |
| cd02072 | 128 | Glm_B12_BD B12 binding domain of glutamate mutase | 90.36 | |
| cd02069 | 213 | methionine_synthase_B12_BD B12 binding domain of m | 90.21 | |
| cd04728 | 248 | ThiG Thiazole synthase (ThiG) is the tetrameric en | 90.01 | |
| PF02310 | 121 | B12-binding: B12 binding domain; InterPro: IPR0061 | 89.63 | |
| cd02068 | 127 | radical_SAM_B12_BD B12 binding domain_like associa | 89.42 | |
| PRK00043 | 212 | thiE thiamine-phosphate pyrophosphorylase; Reviewe | 89.13 | |
| PRK00208 | 250 | thiG thiazole synthase; Reviewed | 89.04 | |
| TIGR03401 | 228 | cyanamide_fam HD domain protein, cyanamide hydrata | 88.52 | |
| COG4999 | 140 | Uncharacterized domain of BarA-like signal transdu | 88.35 | |
| TIGR02370 | 197 | pyl_corrinoid methyltransferase cognate corrinoid | 88.17 | |
| PRK01130 | 221 | N-acetylmannosamine-6-phosphate 2-epimerase; Provi | 88.01 | |
| COG2185 | 143 | Sbm Methylmalonyl-CoA mutase, C-terminal domain/su | 87.84 | |
| COG1713 | 187 | Predicted HD superfamily hydrolase involved in NAD | 85.65 | |
| PRK09426 | 714 | methylmalonyl-CoA mutase; Reviewed | 84.97 | |
| TIGR02026 | 497 | BchE magnesium-protoporphyrin IX monomethyl ester | 84.86 | |
| PF10087 | 97 | DUF2325: Uncharacterized protein conserved in bact | 84.05 | |
| PF01408 | 120 | GFO_IDH_MocA: Oxidoreductase family, NAD-binding R | 83.85 | |
| TIGR01596 | 177 | cas3_HD CRISPR-associated endonuclease Cas3-HD. CR | 83.64 | |
| PRK03958 | 176 | tRNA 2'-O-methylase; Reviewed | 83.19 | |
| COG0512 | 191 | PabA Anthranilate/para-aminobenzoate synthases com | 82.14 | |
| PRK10119 | 231 | putative hydrolase; Provisional | 82.13 | |
| CHL00162 | 267 | thiG thiamin biosynthesis protein G; Validated | 82.08 | |
| PRK13480 | 314 | 3'-5' exoribonuclease YhaM; Provisional | 80.95 | |
| PF03602 | 183 | Cons_hypoth95: Conserved hypothetical protein 95; | 80.48 |
| >COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain [Transcription / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=299.25 Aligned_cols=225 Identities=21% Similarity=0.266 Sum_probs=182.8
Q ss_pred CccEEEEEecCHHHHHHHHHHHHhCCCEEEEECCHHHHHHHHHcCCCCceEEEEeccCCCCCHHHHHHHHHh-ccCCCCC
Q 042954 40 MVLRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGFALLTLVME-HDVCKNI 118 (720)
Q Consensus 40 m~~rVLIVDDd~~~r~~L~~lL~~~gyeV~~A~sg~eAle~L~~~~~~pDLVLlDv~MP~~dGieLL~~Ir~-~~~~p~i 118 (720)
.+++||+|||++..+..++.+|+..+|.|..|.+|++|++++...+ +|+||+|++||+|+|+++|.+|+. .+.+..+
T Consensus 13 ~~~~vl~vDD~~~~~~~~~~lL~~~~y~v~~ae~g~~a~kl~~~~~--~dlvllD~~mp~mdg~ev~~~lk~~~p~t~~i 90 (360)
T COG3437 13 EKLTVLLVDDEPDNLEALRQLLRMIGYRVIEAENGEEALKLLQEEP--PDLVLLDVRMPEMDGAEVLNKLKAMSPSTRRI 90 (360)
T ss_pred ccceEEEecCchhHHHHHHHHHHhcccceeeecCchHHHHHhcccC--CceEEeeccCCCccHHHHHHHHHhcCCccccc
Confidence 3579999999999999999999999999999999999999998755 999999999999999999999999 6677889
Q ss_pred eEEEEeccCCHHHHHHHHHcCCcEEEeCCCCHHHHHHHHHHHHhhccccCCCcccchhhhhcccCccccccccccCCchh
Q 042954 119 PVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRRHSLLGGHVPQNLHDVYHKGGAISENNMASSHSSDY 198 (720)
Q Consensus 119 pVIvLTs~~d~e~~~~Al~~GA~dYL~KP~~~~eL~~~l~~vlr~~~~l~~~~~~~~~~~~~~~~~~~el~~~s~~~~~~ 198 (720)
|||++|++.+.+...+|+..||+|||.|||++.+|...+...++.+..-.....+..... ..++... ...
T Consensus 91 p~i~lT~~~d~~~~~~~~~~g~~dyl~KP~~~~~l~~rv~~~~q~k~~~~~~~~~~~~le------~~e~~~~----~~e 160 (360)
T COG3437 91 PVILLTAYADSEDRQRALEAGADDYLSKPISPKELVARVSSHLQLKRNEDFLLDQNLYLE------LQELRRR----TEE 160 (360)
T ss_pred ceEEEeecCChHHHHHHHHhhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHH----HHH
Confidence 999999999999999999999999999999999999998765544321000111111111 0111000 000
Q ss_pred hhhh-----hhhhHHHHhhhhhccCCCCcchhhhhhHHHHHHHHHHHHHHHhcCCCccchhhhHHHHHHhhhhcCCCccc
Q 042954 199 AASS-----QKNKGSEKVSDAQSSRTSSPYLEAESAYMQNMQGLSQLKCRSASNTCSTDMERQNECAKLETESLMPESKT 273 (720)
Q Consensus 199 ~~~~-----~~~kei~~ls~arS~~T~~~~v~~~g~Hv~Rva~~s~~lA~~l~gl~~~~~~~~~~~~~l~~Aa~LHDIGK 273 (720)
.... .+.+++..+.+.++.+| |.|+.||+.|++++|+.+ ||++. +++.|++||+||||||
T Consensus 161 ~~~~~~~~~~t~~~L~~~~E~R~~et--------g~H~~Rv~~~~~~lAe~l-gLse~------~v~~i~~AapLHDIGK 225 (360)
T COG3437 161 LAQIEDNLDETLEELAALLEVRDYET--------GDHLERVAQYSELLAELL-GLSEE------EVDLIKKAAPLHDIGK 225 (360)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccch--------hhHHHHHHHHHHHHHHHh-CCCHH------HHHHHHhccchhhccc
Confidence 1111 12223777778899999 999999999999999999 99988 9999999999999999
Q ss_pred ccCCcccc-ccccccccCC
Q 042954 274 GGASDELI-VSEKLNRSGS 291 (720)
Q Consensus 274 I~iPD~IL-KPgkL~~~~~ 291 (720)
|+|||+|| |||+|+.-..
T Consensus 226 vaiPD~ILlKpg~Lt~ee~ 244 (360)
T COG3437 226 VAIPDSILLKPGKLTSEEF 244 (360)
T ss_pred ccCChHHhcCCCCCCHHHH
Confidence 99999999 9999986433
|
|
| >COG2204 AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG0745 OmpR Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription] | Back alignment and domain information |
|---|
| >COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG4566 TtrR Response regulator [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG2197 CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] | Back alignment and domain information |
|---|
| >PRK11466 hybrid sensory histidine kinase TorS; Provisional | Back alignment and domain information |
|---|
| >COG4565 CitB Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF00072 Response_reg: Response regulator receiver domain; InterPro: IPR001789 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions [] | Back alignment and domain information |
|---|
| >PRK15347 two component system sensor kinase SsrA; Provisional | Back alignment and domain information |
|---|
| >PF06203 CCT: CCT motif; InterPro: IPR010402 The CCT (CONSTANS, CO-like, and TOC1) domain is a highly conserved basic module of ~43 amino acids, which is found near the C terminus of plant proteins often involved in light signal transduction | Back alignment and domain information |
|---|
| >PRK11091 aerobic respiration control sensor protein ArcB; Provisional | Back alignment and domain information |
|---|
| >TIGR02956 TMAO_torS TMAO reductase sytem sensor TorS | Back alignment and domain information |
|---|
| >PRK10046 dpiA two-component response regulator DpiA; Provisional | Back alignment and domain information |
|---|
| >PRK09959 hybrid sensory histidine kinase in two-component regulatory system with EvgA; Provisional | Back alignment and domain information |
|---|
| >PRK10841 hybrid sensory kinase in two-component regulatory system with RcsB and YojN; Provisional | Back alignment and domain information |
|---|
| >PRK11107 hybrid sensory histidine kinase BarA; Provisional | Back alignment and domain information |
|---|
| >COG0784 CheY FOG: CheY-like receiver [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PLN03029 type-a response regulator protein; Provisional | Back alignment and domain information |
|---|
| >PRK10161 transcriptional regulator PhoB; Provisional | Back alignment and domain information |
|---|
| >PRK10816 DNA-binding transcriptional regulator PhoP; Provisional | Back alignment and domain information |
|---|
| >COG3706 PleD Response regulator containing a CheY-like receiver domain and a GGDEF domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >TIGR02154 PhoB phosphate regulon transcriptional regulatory protein PhoB | Back alignment and domain information |
|---|
| >PRK09483 response regulator; Provisional | Back alignment and domain information |
|---|
| >PRK10529 DNA-binding transcriptional activator KdpE; Provisional | Back alignment and domain information |
|---|
| >PRK10430 DNA-binding transcriptional activator DcuR; Provisional | Back alignment and domain information |
|---|
| >PRK10766 DNA-binding transcriptional regulator TorR; Provisional | Back alignment and domain information |
|---|
| >PRK10840 transcriptional regulator RcsB; Provisional | Back alignment and domain information |
|---|
| >PRK10643 DNA-binding transcriptional regulator BasR; Provisional | Back alignment and domain information |
|---|
| >PRK09836 DNA-binding transcriptional activator CusR; Provisional | Back alignment and domain information |
|---|
| >COG4567 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain [Signal transduction mechanisms / Transcription] | Back alignment and domain information |
|---|
| >PRK10955 DNA-binding transcriptional regulator CpxR; Provisional | Back alignment and domain information |
|---|
| >PRK11083 DNA-binding response regulator CreB; Provisional | Back alignment and domain information |
|---|
| >PRK11173 two-component response regulator; Provisional | Back alignment and domain information |
|---|
| >PRK10336 DNA-binding transcriptional regulator QseB; Provisional | Back alignment and domain information |
|---|
| >PRK13837 two-component VirA-like sensor kinase; Provisional | Back alignment and domain information |
|---|
| >PRK15115 response regulator GlrR; Provisional | Back alignment and domain information |
|---|
| >PRK09468 ompR osmolarity response regulator; Provisional | Back alignment and domain information |
|---|
| >PRK10701 DNA-binding transcriptional regulator RstA; Provisional | Back alignment and domain information |
|---|
| >TIGR03787 marine_sort_RR proteobacterial dedicated sortase system response regulator | Back alignment and domain information |
|---|
| >PRK13856 two-component response regulator VirG; Provisional | Back alignment and domain information |
|---|
| >COG3947 Response regulator containing CheY-like receiver and SARP domains [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PRK10923 glnG nitrogen regulation protein NR(I); Provisional | Back alignment and domain information |
|---|
| >PRK10365 transcriptional regulatory protein ZraR; Provisional | Back alignment and domain information |
|---|
| >PRK11517 transcriptional regulatory protein YedW; Provisional | Back alignment and domain information |
|---|
| >CHL00148 orf27 Ycf27; Reviewed | Back alignment and domain information |
|---|
| >PRK13557 histidine kinase; Provisional | Back alignment and domain information |
|---|
| >PRK09958 DNA-binding transcriptional activator EvgA; Provisional | Back alignment and domain information |
|---|
| >TIGR02915 PEP_resp_reg putative PEP-CTERM system response regulator | Back alignment and domain information |
|---|
| >TIGR01387 cztR_silR_copR heavy metal response regulator | Back alignment and domain information |
|---|
| >PRK11361 acetoacetate metabolism regulatory protein AtoC; Provisional | Back alignment and domain information |
|---|
| >KOG0519 consensus Sensory transduction histidine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >TIGR02875 spore_0_A sporulation transcription factor Spo0A | Back alignment and domain information |
|---|
| >PRK09581 pleD response regulator PleD; Reviewed | Back alignment and domain information |
|---|
| >PRK14084 two-component response regulator; Provisional | Back alignment and domain information |
|---|
| >PRK10360 DNA-binding transcriptional activator UhpA; Provisional | Back alignment and domain information |
|---|
| >PRK09935 transcriptional regulator FimZ; Provisional | Back alignment and domain information |
|---|
| >PRK11697 putative two-component response-regulatory protein YehT; Provisional | Back alignment and domain information |
|---|
| >PRK15479 transcriptional regulatory protein TctD; Provisional | Back alignment and domain information |
|---|
| >PRK09581 pleD response regulator PleD; Reviewed | Back alignment and domain information |
|---|
| >TIGR01818 ntrC nitrogen regulation protein NR(I) | Back alignment and domain information |
|---|
| >PRK10710 DNA-binding transcriptional regulator BaeR; Provisional | Back alignment and domain information |
|---|
| >PRK10403 transcriptional regulator NarP; Provisional | Back alignment and domain information |
|---|
| >PRK10100 DNA-binding transcriptional regulator CsgD; Provisional | Back alignment and domain information |
|---|
| >PRK13435 response regulator; Provisional | Back alignment and domain information |
|---|
| >PRK10651 transcriptional regulator NarL; Provisional | Back alignment and domain information |
|---|
| >PRK09390 fixJ response regulator FixJ; Provisional | Back alignment and domain information |
|---|
| >PRK10610 chemotaxis regulatory protein CheY; Provisional | Back alignment and domain information |
|---|
| >PRK12555 chemotaxis-specific methylesterase; Provisional | Back alignment and domain information |
|---|
| >PRK11475 DNA-binding transcriptional activator BglJ; Provisional | Back alignment and domain information |
|---|
| >PRK15411 rcsA colanic acid capsular biosynthesis activation protein A; Provisional | Back alignment and domain information |
|---|
| >PRK00742 chemotaxis-specific methylesterase; Provisional | Back alignment and domain information |
|---|
| >PRK15369 two component system sensor kinase SsrB; Provisional | Back alignment and domain information |
|---|
| >PRK13558 bacterio-opsin activator; Provisional | Back alignment and domain information |
|---|
| >COG2201 CheB Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain [Cell motility and secretion / Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG3707 AmiR Response regulator with putative antiterminator output domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PRK09191 two-component response regulator; Provisional | Back alignment and domain information |
|---|
| >cd00156 REC Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems; contains a phosphoacceptor site that is phosphorylated by histidine kinase homologs; usually found N-terminal to a DNA binding effector domain; forms homodimers | Back alignment and domain information |
|---|
| >PRK10693 response regulator of RpoS; Provisional | Back alignment and domain information |
|---|
| >PRK15029 arginine decarboxylase; Provisional | Back alignment and domain information |
|---|
| >COG3279 LytT Response regulator of the LytR/AlgR family [Transcription / Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG2206 c-di-GMP phosphodiesterase class II (HD-GYP domain) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PRK11107 hybrid sensory histidine kinase BarA; Provisional | Back alignment and domain information |
|---|
| >PRK10618 phosphotransfer intermediate protein in two-component regulatory system with RcsBC; Provisional | Back alignment and domain information |
|---|
| >PRK12704 phosphodiesterase; Provisional | Back alignment and domain information |
|---|
| >COG3706 PleD Response regulator containing a CheY-like receiver domain and a GGDEF domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF06490 FleQ: Flagellar regulatory protein FleQ; InterPro: IPR010518 This domain is found at the N terminus of a subset of sigma54-dependent transcriptional activators that are involved in regulation of flagellar motility e | Back alignment and domain information |
|---|
| >smart00448 REC cheY-homologous receiver domain | Back alignment and domain information |
|---|
| >PF03709 OKR_DC_1_N: Orn/Lys/Arg decarboxylase, N-terminal domain; InterPro: IPR005308 This domain has a flavodoxin-like fold, and is termed the "wing" domain because of its position in the overall 3D structure | Back alignment and domain information |
|---|
| >cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain | Back alignment and domain information |
|---|
| >PRK02261 methylaspartate mutase subunit S; Provisional | Back alignment and domain information |
|---|
| >TIGR00277 HDIG uncharacterized domain HDIG | Back alignment and domain information |
|---|
| >PRK12703 tRNA 2'-O-methylase; Reviewed | Back alignment and domain information |
|---|
| >TIGR00295 conserved hypothetical protein TIGR00295 | Back alignment and domain information |
|---|
| >TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain | Back alignment and domain information |
|---|
| >PF01966 HD: HD domain; InterPro: IPR006674 This domain is found in a superfamily of enzymes with a predicted or known phosphohydrolase activity [] | Back alignment and domain information |
|---|
| >cd02067 B12-binding B12 binding domain (B12-BD) | Back alignment and domain information |
|---|
| >PF09425 CCT_2: Divergent CCT motif; InterPro: IPR018467 The short CCT (CO, COL, TOC1) motif is found in a number of plant proteins, including Constans (CO), Constans-like (COL) and TOC1 | Back alignment and domain information |
|---|
| >PRK07152 nadD putative nicotinate-nucleotide adenylyltransferase; Validated | Back alignment and domain information |
|---|
| >PRK15399 lysine decarboxylase LdcC; Provisional | Back alignment and domain information |
|---|
| >TIGR00488 putative HD superfamily hydrolase of NAD metabolism | Back alignment and domain information |
|---|
| >KOG1601 consensus GATA-4/5/6 transcription factors [Transcription] | Back alignment and domain information |
|---|
| >TIGR01501 MthylAspMutase methylaspartate mutase, S subunit | Back alignment and domain information |
|---|
| >PRK15400 lysine decarboxylase CadA; Provisional | Back alignment and domain information |
|---|
| >cd00077 HDc Metal dependent phosphohydrolases with conserved 'HD' motif | Back alignment and domain information |
|---|
| >PRK00106 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >TIGR03815 CpaE_hom_Actino helicase/secretion neighborhood CpaE-like protein | Back alignment and domain information |
|---|
| >COG1418 Predicted HD superfamily hydrolase [General function prediction only] | Back alignment and domain information |
|---|
| >smart00471 HDc Metal dependent phosphohydrolases with conserved 'HD' motif | Back alignment and domain information |
|---|
| >cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins | Back alignment and domain information |
|---|
| >TIGR03319 YmdA_YtgF conserved hypothetical protein YmdA/YtgF | Back alignment and domain information |
|---|
| >PRK12705 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm) | Back alignment and domain information |
|---|
| >cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase | Back alignment and domain information |
|---|
| >cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism | Back alignment and domain information |
|---|
| >PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin) | Back alignment and domain information |
|---|
| >cd02068 radical_SAM_B12_BD B12 binding domain_like associated with radical SAM domain | Back alignment and domain information |
|---|
| >PRK00043 thiE thiamine-phosphate pyrophosphorylase; Reviewed | Back alignment and domain information |
|---|
| >PRK00208 thiG thiazole synthase; Reviewed | Back alignment and domain information |
|---|
| >TIGR03401 cyanamide_fam HD domain protein, cyanamide hydratase family | Back alignment and domain information |
|---|
| >COG4999 Uncharacterized domain of BarA-like signal transduction histidine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family | Back alignment and domain information |
|---|
| >PRK01130 N-acetylmannosamine-6-phosphate 2-epimerase; Provisional | Back alignment and domain information |
|---|
| >COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism] | Back alignment and domain information |
|---|
| >COG1713 Predicted HD superfamily hydrolase involved in NAD metabolism [Coenzyme metabolism] | Back alignment and domain information |
|---|
| >PRK09426 methylmalonyl-CoA mutase; Reviewed | Back alignment and domain information |
|---|
| >TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase | Back alignment and domain information |
|---|
| >PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
| >PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot | Back alignment and domain information |
|---|
| >TIGR01596 cas3_HD CRISPR-associated endonuclease Cas3-HD | Back alignment and domain information |
|---|
| >PRK03958 tRNA 2'-O-methylase; Reviewed | Back alignment and domain information |
|---|
| >COG0512 PabA Anthranilate/para-aminobenzoate synthases component II [Amino acid transport and metabolism / Coenzyme metabolism] | Back alignment and domain information |
|---|
| >PRK10119 putative hydrolase; Provisional | Back alignment and domain information |
|---|
| >CHL00162 thiG thiamin biosynthesis protein G; Validated | Back alignment and domain information |
|---|
| >PRK13480 3'-5' exoribonuclease YhaM; Provisional | Back alignment and domain information |
|---|
| >PF03602 Cons_hypoth95: Conserved hypothetical protein 95; InterPro: IPR004398 This entry contains Ribosomal RNA small subunit methyltransferase D as well as the putative rRNA methyltransferase YlbH | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 720 | ||||
| 3t6k_A | 136 | Crystal Structure Of A Hypothetical Response Regula | 2e-08 | ||
| 2oqr_A | 230 | The Structure Of The Response Regulator Regx3 From | 4e-07 | ||
| 3nhz_A | 125 | Structure Of N-Terminal Domain Of Mtra Length = 125 | 8e-07 | ||
| 3hzh_A | 157 | Crystal Structure Of The Chex-Chey-Bef3-Mg+2 Comple | 1e-06 | ||
| 3gwg_A | 129 | Crystal Structure Of Chey Of Helicobacter Pylori Le | 1e-06 | ||
| 3h1g_A | 129 | Crystal Structure Of Chey Mutant T84a Of Helicobact | 1e-06 | ||
| 3to5_A | 134 | High Resolution Structure Of Chey3 From Vibrio Chol | 2e-06 | ||
| 2jb9_A | 127 | Phob Response Regulator Receiver Domain Constitutiv | 2e-06 | ||
| 3h1f_A | 129 | Crystal Structure Of Chey Mutant D53a Of Helicobact | 2e-06 | ||
| 3dge_C | 122 | Structure Of A Histidine Kinase-response Regulator | 7e-06 | ||
| 3gl9_A | 122 | The Structure Of A Histidine Kinase-Response Regula | 1e-05 | ||
| 3ffx_A | 128 | Crystal Structure Of Chey Triple Mutant F14e, N59r, | 2e-05 | ||
| 1f51_E | 119 | A Transient Interaction Between Two Phosphorelay Pr | 2e-05 | ||
| 1srr_A | 124 | Crystal Structure Of A Phosphatase Resistant Mutant | 2e-05 | ||
| 1yio_A | 208 | Crystallographic Structure Of Response Regulator St | 2e-05 | ||
| 1u0s_Y | 118 | Chemotaxis Kinase Chea P2 Domain In Complex With Re | 2e-05 | ||
| 3tmy_A | 120 | Chey From Thermotoga Maritima (Mn-Iii) Length = 120 | 2e-05 | ||
| 1l5y_A | 155 | Crystal Structure Of Mg2+ / Bef3-bound Receiver Dom | 2e-05 | ||
| 1qkk_A | 155 | Crystal Structure Of The Receiver Domain And Linker | 2e-05 | ||
| 3cfy_A | 137 | Crystal Structure Of Signal Receiver Domain Of Puta | 3e-05 | ||
| 1b00_A | 127 | Phob Receiver Domain From Escherichia Coli Length = | 3e-05 | ||
| 1zes_A | 125 | Bef3- Activated Phob Receiver Domain Length = 125 | 3e-05 | ||
| 2ftk_E | 124 | Berylloflouride Spo0f Complex With Spo0b Length = 1 | 3e-05 | ||
| 1pux_A | 124 | Nmr Solution Structure Of Bef3-Activated Spo0f, 20 | 4e-05 | ||
| 3q15_C | 126 | Crystal Structure Of Raph Complexed With Spo0f Leng | 4e-05 | ||
| 2jvi_A | 132 | Nmr Solution Structure Of The Hyper-Sporulation Res | 5e-05 | ||
| 3gt7_A | 154 | Crystal Structure Of Signal Receiver Domain Of Sign | 6e-05 | ||
| 3nnn_A | 122 | Bef3 Activated Drrd Receiver Domain Length = 122 | 8e-05 | ||
| 3f7a_A | 394 | Structure Of Orthorhombic Crystal Form Of Pseudomon | 8e-05 | ||
| 2jvj_A | 132 | Nmr Solution Structure Of The Hyper-Sporulation Res | 8e-05 | ||
| 1j56_A | 124 | Minimized Average Structure Of Beryllofluoride-Acti | 9e-05 | ||
| 1krw_A | 124 | Solution Structure And Backbone Dynamics Of Beryllo | 9e-05 | ||
| 1dc7_A | 124 | Structure Of A Transiently Phosphorylated "switch" | 1e-04 | ||
| 3ffw_A | 128 | Crystal Structure Of Chey Triple Mutant F14q, N59k, | 1e-04 | ||
| 1e6l_A | 127 | Two-Component Signal Transduction System D13a Mutan | 1e-04 | ||
| 3eod_A | 130 | Crystal Structure Of N-Terminal Domain Of E. Coli R | 1e-04 | ||
| 1m5t_A | 124 | Crystal Structure Of The Response Regulator Divk Le | 1e-04 | ||
| 3eq2_A | 394 | Structure Of Hexagonal Crystal Form Of Pseudomonas | 1e-04 | ||
| 2wb4_A | 459 | Activated Diguanylate Cyclase Pled In Complex With | 1e-04 | ||
| 3fft_A | 128 | Crystal Structure Of Chey Double Mutant F14e, E89r | 2e-04 | ||
| 3jte_A | 143 | Crystal Structure Of Response Regulator Receiver Do | 2e-04 | ||
| 2jvk_A | 132 | Nmr Solution Structure Of The Hyper-Sporulation Res | 2e-04 | ||
| 1dc8_A | 124 | Structure Of A Transiently Phosphorylated "switch" | 2e-04 | ||
| 1w25_A | 459 | Response Regulator Pled In Complex With C-digmp Len | 2e-04 | ||
| 3rvn_A | 132 | Structure Of The Chey-Bef3 Complex With Substitutio | 2e-04 | ||
| 3oly_A | 129 | Structural And Functional Effects Of Substitution A | 2e-04 | ||
| 1ab6_A | 125 | Structure Of Chey Mutant F14n, V86t Length = 125 | 2e-04 | ||
| 3q9s_A | 249 | Crystal Structure Of Rra(1-215) From Deinococcus Ra | 3e-04 | ||
| 3fgz_A | 128 | Crystal Structure Of Chey Triple Mutant F14e, N59m, | 3e-04 | ||
| 2jba_B | 127 | Phob Response Regulator Receiver Domain Constitutiv | 3e-04 | ||
| 2jba_A | 127 | Phob Response Regulator Receiver Domain Constitutiv | 3e-04 | ||
| 3m6m_D | 143 | Crystal Structure Of Rpff Complexed With Rec Domain | 3e-04 | ||
| 2r25_B | 133 | Complex Of Ypd1 And Sln1-R1 With Bound Mg2+ And Bef | 3e-04 | ||
| 1oxb_B | 134 | Complex Between Ypd1 And Sln1 Response Regulator Do | 3e-04 | ||
| 3rvj_A | 132 | Structure Of The Chey-Bef3 Complex With Substitutio | 3e-04 | ||
| 3olv_A | 129 | Structural And Functional Effects Of Substitution A | 3e-04 | ||
| 3rvl_A | 132 | Structure Of The Chey-Bef3 Complex With Substitutio | 4e-04 | ||
| 1ab5_A | 125 | Structure Of Chey Mutant F14n, V21t Length = 125 | 4e-04 | ||
| 1zy2_A | 150 | Crystal Structure Of The Phosphorylated Receiver Do | 4e-04 | ||
| 1d4z_A | 128 | Crystal Structure Of Chey-95iv, A Hyperactive Chey | 4e-04 | ||
| 3rvp_A | 132 | Structure Of The Chey-Bef3 Complex With Substitutio | 5e-04 | ||
| 1ehc_A | 128 | Structure Of Signal Transduction Protein Chey Lengt | 5e-04 | ||
| 3f7n_A | 128 | Crystal Structure Of Chey Triple Mutant F14e, N59m, | 5e-04 | ||
| 1ymv_A | 129 | Signal Transduction Protein Chey Mutant With Phe 14 | 6e-04 | ||
| 3olw_A | 129 | Structural And Functional Effects Of Substitution A | 6e-04 | ||
| 1mih_A | 129 | A Role For Chey Glu 89 In Chez-Mediated Dephosphory | 6e-04 | ||
| 1cye_A | 129 | Three Dimensional Structure Of Chemotactic Che Y Pr | 6e-04 | ||
| 3oo0_A | 129 | Structure Of Apo Chey A113p Length = 129 | 6e-04 | ||
| 1cey_A | 128 | Assignments, Secondary Structure, Global Fold, And | 6e-04 | ||
| 1eay_A | 128 | Chey-Binding (P2) Domain Of Chea In Complex With Ch | 6e-04 | ||
| 3myy_A | 128 | Structure Of E. Coli Chey Mutant A113p Bound To Ber | 6e-04 | ||
| 1djm_A | 129 | Solution Structure Of Bef3-Activated Chey From Esch | 6e-04 | ||
| 2zwm_A | 130 | Crystal Structure Of Yycf Receiver Domain From Baci | 7e-04 | ||
| 1jbe_A | 128 | 1.08 A Structure Of Apo-Chey Reveals Meta-Active Co | 7e-04 | ||
| 3f6p_A | 120 | Crystal Structure Of Unphosphorelated Receiver Doma | 7e-04 | ||
| 1kgs_A | 225 | Crystal Structure At 1.50 A Of An OmprPHOB HOMOLOG | 8e-04 | ||
| 2zay_A | 147 | Crystal Structure Of Response Regulator From Desulf | 8e-04 | ||
| 1ymu_A | 130 | Signal Transduction Protein Chey Mutant With Met 17 | 8e-04 | ||
| 2fka_A | 129 | Crystal Structure Of Mg(2+) And Bef(3)(-)-Bound Che | 8e-04 | ||
| 2che_A | 128 | Structure Of The Mg2+-Bound Form Of Chey And Mechan | 8e-04 | ||
| 1ys6_A | 233 | Crystal Structure Of The Response Regulatory Protei | 8e-04 | ||
| 3olx_A | 129 | Structural And Functional Effects Of Substitution A | 8e-04 | ||
| 1e6k_A | 130 | Two-Component Signal Transduction System D12a Mutan | 9e-04 | ||
| 3eul_A | 152 | Structure Of The Signal Receiver Domain Of The Puta | 9e-04 |
| >pdb|3T6K|A Chain A, Crystal Structure Of A Hypothetical Response Regulator (Caur_3799) From Chloroflexus Aurantiacus J-10-Fl At 1.86 A Resolution Length = 136 | Back alignment and structure |
|
| >pdb|2OQR|A Chain A, The Structure Of The Response Regulator Regx3 From Mycobacterium Tuberculosis Length = 230 | Back alignment and structure |
| >pdb|3NHZ|A Chain A, Structure Of N-Terminal Domain Of Mtra Length = 125 | Back alignment and structure |
| >pdb|3HZH|A Chain A, Crystal Structure Of The Chex-Chey-Bef3-Mg+2 Complex From Borrelia Burgdorferi Length = 157 | Back alignment and structure |
| >pdb|3GWG|A Chain A, Crystal Structure Of Chey Of Helicobacter Pylori Length = 129 | Back alignment and structure |
| >pdb|3H1G|A Chain A, Crystal Structure Of Chey Mutant T84a Of Helicobacter Pylori Length = 129 | Back alignment and structure |
| >pdb|3TO5|A Chain A, High Resolution Structure Of Chey3 From Vibrio Cholerae Length = 134 | Back alignment and structure |
| >pdb|2JB9|A Chain A, Phob Response Regulator Receiver Domain Constitutively- Active Double Mutant D10a And D53e. Length = 127 | Back alignment and structure |
| >pdb|3H1F|A Chain A, Crystal Structure Of Chey Mutant D53a Of Helicobacter Pylori Length = 129 | Back alignment and structure |
| >pdb|3DGE|C Chain C, Structure Of A Histidine Kinase-response Regulator Complex Reveals Insights Into Two-component Signaling And A Novel Cis- Autophosphorylation Mechanism Length = 122 | Back alignment and structure |
| >pdb|3GL9|A Chain A, The Structure Of A Histidine Kinase-Response Regulator Complex Sheds Light Into Two-Component Signaling And Reveals A Novel Cis Autophosphorylation Mechanism Length = 122 | Back alignment and structure |
| >pdb|3FFX|A Chain A, Crystal Structure Of Chey Triple Mutant F14e, N59r, E89h Complexed With Bef3- And Mn2+ Length = 128 | Back alignment and structure |
| >pdb|1F51|E Chain E, A Transient Interaction Between Two Phosphorelay Proteins Trapped In A Crystal Lattice Reveals The Mechanism Of Molecular Recognition And Phosphotransfer In Singal Transduction Length = 119 | Back alignment and structure |
| >pdb|1SRR|A Chain A, Crystal Structure Of A Phosphatase Resistant Mutant Of Sporulation Response Regulator Spo0f From Bacillus Subtilis Length = 124 | Back alignment and structure |
| >pdb|1YIO|A Chain A, Crystallographic Structure Of Response Regulator Styr From Pseudomonas Fluorescens Length = 208 | Back alignment and structure |
| >pdb|1U0S|Y Chain Y, Chemotaxis Kinase Chea P2 Domain In Complex With Response Regulator Chey From The Thermophile Thermotoga Maritima Length = 118 | Back alignment and structure |
| >pdb|3TMY|A Chain A, Chey From Thermotoga Maritima (Mn-Iii) Length = 120 | Back alignment and structure |
| >pdb|1L5Y|A Chain A, Crystal Structure Of Mg2+ / Bef3-bound Receiver Domain Of Sinorhizobium Meliloti Dctd Length = 155 | Back alignment and structure |
| >pdb|1QKK|A Chain A, Crystal Structure Of The Receiver Domain And Linker Region Of Dctd From Sinorhizobium Meliloti Length = 155 | Back alignment and structure |
| >pdb|3CFY|A Chain A, Crystal Structure Of Signal Receiver Domain Of Putative Luxo Repressor Protein From Vibrio Parahaemolyticus Length = 137 | Back alignment and structure |
| >pdb|1B00|A Chain A, Phob Receiver Domain From Escherichia Coli Length = 127 | Back alignment and structure |
| >pdb|1ZES|A Chain A, Bef3- Activated Phob Receiver Domain Length = 125 | Back alignment and structure |
| >pdb|2FTK|E Chain E, Berylloflouride Spo0f Complex With Spo0b Length = 124 | Back alignment and structure |
| >pdb|1PUX|A Chain A, Nmr Solution Structure Of Bef3-Activated Spo0f, 20 Conformers Length = 124 | Back alignment and structure |
| >pdb|3Q15|C Chain C, Crystal Structure Of Raph Complexed With Spo0f Length = 126 | Back alignment and structure |
| >pdb|2JVI|A Chain A, Nmr Solution Structure Of The Hyper-Sporulation Response Regulator Spo0f Mutant H101a From Bacillus Subtilis Length = 132 | Back alignment and structure |
| >pdb|3GT7|A Chain A, Crystal Structure Of Signal Receiver Domain Of Signal Transduction Histidine Kinase From Syntrophus Aciditrophicus Length = 154 | Back alignment and structure |
| >pdb|3NNN|A Chain A, Bef3 Activated Drrd Receiver Domain Length = 122 | Back alignment and structure |
| >pdb|3F7A|A Chain A, Structure Of Orthorhombic Crystal Form Of Pseudomonas Aeruginosa Rssb Length = 394 | Back alignment and structure |
| >pdb|2JVJ|A Chain A, Nmr Solution Structure Of The Hyper-Sporulation Response Regulator Spo0f Mutant I90a From Bacillus Subtilis Length = 132 | Back alignment and structure |
| >pdb|1J56|A Chain A, Minimized Average Structure Of Beryllofluoride-Activated Ntrc Receiver Domain: Model Structure Incorporating Active Site Contacts Length = 124 | Back alignment and structure |
| >pdb|1KRW|A Chain A, Solution Structure And Backbone Dynamics Of Beryllofluoride- Activated Ntrc Receiver Domain Length = 124 | Back alignment and structure |
| >pdb|1DC7|A Chain A, Structure Of A Transiently Phosphorylated "switch" In Bacterial Signal Transduction Length = 124 | Back alignment and structure |
| >pdb|3FFW|A Chain A, Crystal Structure Of Chey Triple Mutant F14q, N59k, E89y Complexed With Bef3- And Mn2+ Length = 128 | Back alignment and structure |
| >pdb|1E6L|A Chain A, Two-Component Signal Transduction System D13a Mutant Of Chey Length = 127 | Back alignment and structure |
| >pdb|3EOD|A Chain A, Crystal Structure Of N-Terminal Domain Of E. Coli Rssb Length = 130 | Back alignment and structure |
| >pdb|1M5T|A Chain A, Crystal Structure Of The Response Regulator Divk Length = 124 | Back alignment and structure |
| >pdb|3EQ2|A Chain A, Structure Of Hexagonal Crystal Form Of Pseudomonas Aeruginosa Rssb Length = 394 | Back alignment and structure |
| >pdb|2WB4|A Chain A, Activated Diguanylate Cyclase Pled In Complex With C-Di-Gmp Length = 459 | Back alignment and structure |
| >pdb|3FFT|A Chain A, Crystal Structure Of Chey Double Mutant F14e, E89r Complexed With Bef3- And Mn2+ Length = 128 | Back alignment and structure |
| >pdb|3JTE|A Chain A, Crystal Structure Of Response Regulator Receiver Domain Protein From Clostridium Thermocellum Length = 143 | Back alignment and structure |
| >pdb|2JVK|A Chain A, Nmr Solution Structure Of The Hyper-Sporulation Response Regulator Spo0f Mutant L66a From Bacillus Subtilis Length = 132 | Back alignment and structure |
| >pdb|1DC8|A Chain A, Structure Of A Transiently Phosphorylated "switch" In Bacterial Signal Transduction Length = 124 | Back alignment and structure |
| >pdb|1W25|A Chain A, Response Regulator Pled In Complex With C-digmp Length = 459 | Back alignment and structure |
| >pdb|3RVN|A Chain A, Structure Of The Chey-Bef3 Complex With Substitutions At 59 And 89: N59d And E89y Length = 132 | Back alignment and structure |
| >pdb|3OLY|A Chain A, Structural And Functional Effects Of Substitution At Position T+1 In Chey: Cheya88m-Bef3-Mn Complex Length = 129 | Back alignment and structure |
| >pdb|1AB6|A Chain A, Structure Of Chey Mutant F14n, V86t Length = 125 | Back alignment and structure |
| >pdb|3Q9S|A Chain A, Crystal Structure Of Rra(1-215) From Deinococcus Radiodurans Length = 249 | Back alignment and structure |
| >pdb|3FGZ|A Chain A, Crystal Structure Of Chey Triple Mutant F14e, N59m, E89r Complexed With Bef3- And Mn2+ Length = 128 | Back alignment and structure |
| >pdb|2JBA|B Chain B, Phob Response Regulator Receiver Domain Constitutively- Active Double Mutant D53a And Y102c Length = 127 | Back alignment and structure |
| >pdb|2JBA|A Chain A, Phob Response Regulator Receiver Domain Constitutively- Active Double Mutant D53a And Y102c Length = 127 | Back alignment and structure |
| >pdb|3M6M|D Chain D, Crystal Structure Of Rpff Complexed With Rec Domain Of Rpfc Length = 143 | Back alignment and structure |
| >pdb|2R25|B Chain B, Complex Of Ypd1 And Sln1-R1 With Bound Mg2+ And Bef3- Length = 133 | Back alignment and structure |
| >pdb|1OXB|B Chain B, Complex Between Ypd1 And Sln1 Response Regulator Domain In Space Group P2(1)2(1)2(1) Length = 134 | Back alignment and structure |
| >pdb|3RVJ|A Chain A, Structure Of The Chey-Bef3 Complex With Substitutions At 59 And 89: N59d And E89q Length = 132 | Back alignment and structure |
| >pdb|3OLV|A Chain A, Structural And Functional Effects Of Substitution At Position T+1 In Chey: Cheya88v-Bef3-Mg Complex Length = 129 | Back alignment and structure |
| >pdb|3RVL|A Chain A, Structure Of The Chey-Bef3 Complex With Substitutions At 59 And 89: N59d And E89r Length = 132 | Back alignment and structure |
| >pdb|1AB5|A Chain A, Structure Of Chey Mutant F14n, V21t Length = 125 | Back alignment and structure |
| >pdb|1ZY2|A Chain A, Crystal Structure Of The Phosphorylated Receiver Domain Of The Transcription Regulator Ntrc1 From Aquifex Aeolicus Length = 150 | Back alignment and structure |
| >pdb|1D4Z|A Chain A, Crystal Structure Of Chey-95iv, A Hyperactive Chey Mutant Length = 128 | Back alignment and structure |
| >pdb|3RVP|A Chain A, Structure Of The Chey-Bef3 Complex With Substitutions At 59 And 89: N59d And E89k Length = 132 | Back alignment and structure |
| >pdb|1EHC|A Chain A, Structure Of Signal Transduction Protein Chey Length = 128 | Back alignment and structure |
| >pdb|3F7N|A Chain A, Crystal Structure Of Chey Triple Mutant F14e, N59m, E89l Complexed With Bef3- And Mn2+ Length = 128 | Back alignment and structure |
| >pdb|1YMV|A Chain A, Signal Transduction Protein Chey Mutant With Phe 14 Replaced By Gly, Ser 15 Replaced By Gly, And Met 17 Replaced By Gly Length = 129 | Back alignment and structure |
| >pdb|3OLW|A Chain A, Structural And Functional Effects Of Substitution At Position T+1 In Chey: Cheya88t-Bef3-Mn Complex Length = 129 | Back alignment and structure |
| >pdb|1MIH|A Chain A, A Role For Chey Glu 89 In Chez-Mediated Dephosphorylation Of The E. Coli Chemotaxis Response Regulator Chey Length = 129 | Back alignment and structure |
| >pdb|1CYE|A Chain A, Three Dimensional Structure Of Chemotactic Che Y Protein In Aqueous Solution By Nuclear Magnetic Resonance Methods Length = 129 | Back alignment and structure |
| >pdb|3OO0|A Chain A, Structure Of Apo Chey A113p Length = 129 | Back alignment and structure |
| >pdb|1CEY|A Chain A, Assignments, Secondary Structure, Global Fold, And Dynamics Of Chemotaxis Y Protein Using Three-And Four-Dimensional Heteronuclear (13c,15n) Nmr Spectroscopy Length = 128 | Back alignment and structure |
| >pdb|1EAY|A Chain A, Chey-Binding (P2) Domain Of Chea In Complex With Chey From Escherichia Coli Length = 128 | Back alignment and structure |
| >pdb|3MYY|A Chain A, Structure Of E. Coli Chey Mutant A113p Bound To Beryllium Fluoride Length = 128 | Back alignment and structure |
| >pdb|1DJM|A Chain A, Solution Structure Of Bef3-Activated Chey From Escherichia Coli Length = 129 | Back alignment and structure |
| >pdb|2ZWM|A Chain A, Crystal Structure Of Yycf Receiver Domain From Bacillus Subtilis Length = 130 | Back alignment and structure |
| >pdb|1JBE|A Chain A, 1.08 A Structure Of Apo-Chey Reveals Meta-Active Conformation Length = 128 | Back alignment and structure |
| >pdb|3F6P|A Chain A, Crystal Structure Of Unphosphorelated Receiver Domain Of Yycf Length = 120 | Back alignment and structure |
| >pdb|1KGS|A Chain A, Crystal Structure At 1.50 A Of An OmprPHOB HOMOLOG FROM THERMOTOGA Maritima Length = 225 | Back alignment and structure |
| >pdb|2ZAY|A Chain A, Crystal Structure Of Response Regulator From Desulfuromonas Acetoxidans Length = 147 | Back alignment and structure |
| >pdb|1YMU|A Chain A, Signal Transduction Protein Chey Mutant With Met 17 Replaced By Gly (M17g) Length = 130 | Back alignment and structure |
| >pdb|2FKA|A Chain A, Crystal Structure Of Mg(2+) And Bef(3)(-)-Bound Chey In Complex With Chez(200-214) Solved From A F432 Crystal Grown In Caps (Ph 10.5) Length = 129 | Back alignment and structure |
| >pdb|2CHE|A Chain A, Structure Of The Mg2+-Bound Form Of Chey And Mechanism Of Phosphoryl Transfer In Bacterial Chemotaxis Length = 128 | Back alignment and structure |
| >pdb|1YS6|A Chain A, Crystal Structure Of The Response Regulatory Protein Prra From Mycobacterium Tuberculosis Length = 233 | Back alignment and structure |
| >pdb|3OLX|A Chain A, Structural And Functional Effects Of Substitution At Position T+1 In Chey: Cheya88s-Bef3-Mn Complex Length = 129 | Back alignment and structure |
| >pdb|1E6K|A Chain A, Two-Component Signal Transduction System D12a Mutant Of Chey Length = 130 | Back alignment and structure |
| >pdb|3EUL|A Chain A, Structure Of The Signal Receiver Domain Of The Putative Response Regulator Narl From Mycobacterium Tuberculosis Length = 152 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver domain, target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405} Length = 143 | Back alignment and structure |
|---|
Score = 103 bits (259), Expect = 4e-26
Identities = 30/125 (24%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
++L+++ + + Q I LL G V +SID+V+T++++P +SG
Sbjct: 5 KILVIDDESTILQNIKFLLEIDGNEVLTASSSTEGLRIFTENCNSIDVVITDMKMPKLSG 64
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWR 162
+L + + ++ VI+++ H + + M +GA ++L KPV +L +
Sbjct: 65 MDILREIKKIT--PHMAVIILTGHGDLDNAILAMKEGAFEYLRKPVTAQDLSIAINNAIN 122
Query: 163 RHSLL 167
R LL
Sbjct: 123 RKKLL 127
|
| >3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} Length = 136 | Back alignment and structure |
|---|
| >1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E Length = 124 | Back alignment and structure |
|---|
| >3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} Length = 137 | Back alignment and structure |
|---|
| >3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633} Length = 137 | Back alignment and structure |
|---|
| >4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A Length = 146 | Back alignment and structure |
|---|
| >3luf_A Two-component system response regulator/ggdef domain protein; structural genomics, ASA_2441, PSI-2, protein structure initiative; HET: MSE; 1.76A {Aeromonas salmonicida} PDB: 3mf4_A* Length = 259 | Back alignment and structure |
|---|
| >3luf_A Two-component system response regulator/ggdef domain protein; structural genomics, ASA_2441, PSI-2, protein structure initiative; HET: MSE; 1.76A {Aeromonas salmonicida} PDB: 3mf4_A* Length = 259 | Back alignment and structure |
|---|
| >2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima} Length = 142 | Back alignment and structure |
|---|
| >1w25_A Stalked-cell differentiation controlling protein; two-component system, ggdef domain, cyclic dinucleotide, cyclic-digmp; HET: C2E; 2.70A {Caulobacter vibrioides} SCOP: c.23.1.1 c.23.1.1 d.58.29.2 PDB: 2v0n_A* 2wb4_A* Length = 459 | Back alignment and structure |
|---|
| >1w25_A Stalked-cell differentiation controlling protein; two-component system, ggdef domain, cyclic dinucleotide, cyclic-digmp; HET: C2E; 2.70A {Caulobacter vibrioides} SCOP: c.23.1.1 c.23.1.1 d.58.29.2 PDB: 2v0n_A* 2wb4_A* Length = 459 | Back alignment and structure |
|---|
| >1dc7_A NTRC, nitrogen regulation protein; receiver domain, phosphorylation, signal transduction, conformational rearrangement; NMR {Salmonella typhimurium} SCOP: c.23.1.1 PDB: 1j56_A 1krw_A 1krx_A 1ntr_A 1dc8_A* Length = 124 | Back alignment and structure |
|---|
| >1ny5_A Transcriptional regulator (NTRC family); AAA+ ATPase, sigma54 activator, bacterial transcription, DIM transcription; HET: ADP; 2.40A {Aquifex aeolicus} SCOP: c.23.1.1 c.37.1.20 PDB: 1ny6_A* 3m0e_A* 1zy2_A* Length = 387 | Back alignment and structure |
|---|
| >3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} Length = 127 | Back alignment and structure |
|---|
| >3dzd_A Transcriptional regulator (NTRC family); sigma43 activator, AAA+ ATPase, response regulator, transcriptional activator, ATP-binding; HET: ADP; 2.40A {Aquifex aeolicus} PDB: 1zit_A 2jrl_A Length = 368 | Back alignment and structure |
|---|
| >1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A* Length = 126 | Back alignment and structure |
|---|
| >1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A Length = 155 | Back alignment and structure |
|---|
| >3bre_A Probable two-component response regulator; protein-nucleotide complex, signaling protein; HET: C2E; 2.40A {Pseudomonas aeruginosa} PDB: 3i5a_A* Length = 358 | Back alignment and structure |
|---|
| >3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A Length = 394 | Back alignment and structure |
|---|
| >1yio_A Response regulatory protein; transcription regulation, DNA binding protein; 2.20A {Pseudomonas fluorescens} SCOP: a.4.6.2 c.23.1.1 PDB: 1zn2_A Length = 208 | Back alignment and structure |
|---|
| >2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis} Length = 154 | Back alignment and structure |
|---|
| >1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A Length = 129 | Back alignment and structure |
|---|
| >3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi} Length = 157 | Back alignment and structure |
|---|
| >3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5} Length = 153 | Back alignment and structure |
|---|
| >2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp} Length = 143 | Back alignment and structure |
|---|
| >3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1} Length = 132 | Back alignment and structure |
|---|
| >3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica} Length = 151 | Back alignment and structure |
|---|
| >1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ... Length = 128 | Back alignment and structure |
|---|
| >1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1 Length = 149 | Back alignment and structure |
|---|
| >2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae} Length = 132 | Back alignment and structure |
|---|
| >2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B Length = 139 | Back alignment and structure |
|---|
| >1s8n_A Putative antiterminator; RV1626, structural genomics, transcriptional antiterminator, component system, PSI; 1.48A {Mycobacterium tuberculosis} SCOP: c.23.1.1 PDB: 1sd5_A Length = 205 | Back alignment and structure |
|---|
| >3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} Length = 152 | Back alignment and structure |
|---|
| >2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis} Length = 140 | Back alignment and structure |
|---|
| >3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} PDB: 3gwg_A 3h1e_A 3h1f_A Length = 129 | Back alignment and structure |
|---|
| >1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y Length = 120 | Back alignment and structure |
|---|
| >3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12} Length = 130 | Back alignment and structure |
|---|
| >3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP} Length = 140 | Back alignment and structure |
|---|
| >1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A Length = 149 | Back alignment and structure |
|---|
| >3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} Length = 136 | Back alignment and structure |
|---|
| >3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei} Length = 184 | Back alignment and structure |
|---|
| >3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901} Length = 140 | Back alignment and structure |
|---|
| >1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1 Length = 140 | Back alignment and structure |
|---|
| >3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii} Length = 146 | Back alignment and structure |
|---|
| >3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum} Length = 140 | Back alignment and structure |
|---|
| >3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} PDB: 3dgf_C 3dge_C Length = 122 | Back alignment and structure |
|---|
| >3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus} Length = 133 | Back alignment and structure |
|---|
| >2b4a_A BH3024; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.42A {Bacillus halodurans} SCOP: c.23.1.1 Length = 138 | Back alignment and structure |
|---|
| >3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV} Length = 143 | Back alignment and structure |
|---|
| >3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp} Length = 140 | Back alignment and structure |
|---|
| >1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A Length = 124 | Back alignment and structure |
|---|
| >3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti} Length = 135 | Back alignment and structure |
|---|
| >2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus} Length = 119 | Back alignment and structure |
|---|
| >3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea} Length = 143 | Back alignment and structure |
|---|
| >2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans} Length = 147 | Back alignment and structure |
|---|
| >1qo0_D AMIR; binding protein, gene regulator, receptor; 2.25A {Pseudomonas aeruginosa} SCOP: c.23.1.3 Length = 196 | Back alignment and structure |
|---|
| >3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB} Length = 154 | Back alignment and structure |
|---|
| >3eqz_A Response regulator; structural genomics, unknown function, PSI-2, protein struct initiative; 2.15A {Colwellia psychrerythraea} Length = 135 | Back alignment and structure |
|---|
| >3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1} Length = 138 | Back alignment and structure |
|---|
| >1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1 Length = 122 | Back alignment and structure |
|---|
| >3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri} Length = 132 | Back alignment and structure |
|---|
| >3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} Length = 140 | Back alignment and structure |
|---|
| >2gwr_A DNA-binding response regulator MTRA; two-component regulatory system, transcription regulation, phosphorylation, OMPR family; 2.10A {Mycobacterium tuberculosis} PDB: 3nhz_A Length = 238 | Back alignment and structure |
|---|
| >2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A Length = 121 | Back alignment and structure |
|---|
| >2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A Length = 127 | Back alignment and structure |
|---|
| >2ayx_A Sensor kinase protein RCSC; two independent structural domains, transferase; NMR {Escherichia coli} SCOP: c.23.1.1 c.23.1.6 PDB: 2ayz_A 2ayy_A Length = 254 | Back alignment and structure |
|---|
| >3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} PDB: 2zwm_A Length = 120 | Back alignment and structure |
|---|
| >1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A Length = 123 | Back alignment and structure |
|---|
| >3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis} Length = 250 | Back alignment and structure |
|---|
| >2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A* Length = 120 | Back alignment and structure |
|---|
| >2oqr_A Sensory transduction protein REGX3; response regulator, winged-helix-turn-helix, DNA-binding, 3D swapping, two component system; 2.03A {Mycobacterium tuberculosis H37RV} Length = 230 | Back alignment and structure |
|---|
| >3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg} Length = 141 | Back alignment and structure |
|---|
| >3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1} Length = 142 | Back alignment and structure |
|---|
| >3n0r_A Response regulator; sigma factor, receiver, two-component SI transduction, signaling protein; HET: MSE GOL; 1.25A {Caulobacter vibrioides} PDB: 3t0y_A Length = 286 | Back alignment and structure |
|---|
| >1zh2_A KDP operon transcriptional regulatory protein KDPE; two-component system, gene regulation, transcription factor, KDP potassium transport system; 2.00A {Escherichia coli} SCOP: c.23.1.1 PDB: 1zh4_A Length = 121 | Back alignment and structure |
|---|
| >3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A* Length = 116 | Back alignment and structure |
|---|
| >2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile} Length = 136 | Back alignment and structure |
|---|
| >2jba_A Phosphate regulon transcriptional regulatory PROT; transcription factor, sensory transduction, phosphate regula transcription regulation; 1.45A {Escherichia coli} PDB: 2jba_B 1b00_A 2iyn_A 2jb9_A 1zes_A Length = 127 | Back alignment and structure |
|---|
| >2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A Length = 137 | Back alignment and structure |
|---|
| >1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1 Length = 136 | Back alignment and structure |
|---|
| >3t8y_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; CHEA, hydrolase; 1.90A {Thermotoga maritima} Length = 164 | Back alignment and structure |
|---|
| >3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} Length = 136 | Back alignment and structure |
|---|
| >3kyj_B CHEY6 protein, putative histidine protein kinase; protein-protein interaction, histidine kinase, response regulator, phosphorylation; 1.40A {Rhodobacter sphaeroides} PDB: 3kyi_B* Length = 145 | Back alignment and structure |
|---|
| >1dcf_A ETR1 protein; beta-alpha five sandwich, transferase; 2.50A {Arabidopsis thaliana} SCOP: c.23.1.2 Length = 136 | Back alignment and structure |
|---|
| >1a2o_A CHEB methylesterase; bacterial chemotaxis, adaptation, serine hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.23.1.1 c.40.1.1 Length = 349 | Back alignment and structure |
|---|
| >3c97_A Signal transduction histidine kinase; structural genomics, signaling, PSI-2, protein structure initiative; 1.70A {Aspergillus oryzae RIB40} Length = 140 | Back alignment and structure |
|---|
| >3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans} Length = 249 | Back alignment and structure |
|---|
| >3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} Length = 144 | Back alignment and structure |
|---|
| >1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} SCOP: a.4.6.1 c.23.1.1 PDB: 1ys6_A Length = 233 | Back alignment and structure |
|---|
| >1p2f_A Response regulator; DRRB, OMPR/PHOB, transcription; HET: MSE; 1.80A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nns_A* Length = 220 | Back alignment and structure |
|---|
| >2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B Length = 133 | Back alignment and structure |
|---|
| >1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A* Length = 225 | Back alignment and structure |
|---|
| >2hqr_A Putative transcriptional regulator; phosporylation-independent response regulator, H. pylori, SY dimer, signaling protein; NMR {Helicobacter pylori} Length = 223 | Back alignment and structure |
|---|
| >2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3} Length = 154 | Back alignment and structure |
|---|
| >1dz3_A Stage 0 sporulation protein A; response regulator, domain swapping; 1.65A {Bacillus stearothermophilus} SCOP: c.23.1.1 PDB: 1qmp_A* Length = 130 | Back alignment and structure |
|---|
| >3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12} Length = 134 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae} Length = 143 | Back alignment and structure |
|---|
| >3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus} Length = 133 | Back alignment and structure |
|---|
| >3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A Length = 206 | Back alignment and structure |
|---|
| >3klo_A Transcriptional regulator VPST; REC domain, HTH domain, DNA-binding, transcription regulation; HET: C2E TAR; 2.80A {Vibrio cholerae} PDB: 3kln_A* Length = 225 | Back alignment and structure |
|---|
| >3sy8_A ROCR; TIM barrel phosphodiesterase-A, transcription regulator; HET: EPE; 2.50A {Pseudomonas aeruginosa} Length = 400 | Back alignment and structure |
|---|
| >3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP} Length = 153 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 720 | |||
| 3to5_A | 134 | CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, p | 99.93 | |
| 3mm4_A | 206 | Histidine kinase homolog; receiver domain, CKI1, c | 99.91 | |
| 3gl9_A | 122 | Response regulator; beta-sheet, surrounded by alph | 99.88 | |
| 3t6k_A | 136 | Response regulator receiver; flavodoxin-like, stru | 99.87 | |
| 3f6p_A | 120 | Transcriptional regulatory protein YYCF; unphospho | 99.86 | |
| 2lpm_A | 123 | Two-component response regulator; transcription re | 99.85 | |
| 3h1g_A | 129 | Chemotaxis protein CHEY homolog; sulfate-bound CHE | 99.84 | |
| 2r25_B | 133 | Osmosensing histidine protein kinase SLN1; alpha5- | 99.84 | |
| 3crn_A | 132 | Response regulator receiver domain protein, CHEY-; | 99.84 | |
| 3gt7_A | 154 | Sensor protein; structural genomics, signal receiv | 99.84 | |
| 3hzh_A | 157 | Chemotaxis response regulator (CHEY-3); phosphatas | 99.83 | |
| 3rqi_A | 184 | Response regulator protein; structural genomics, s | 99.83 | |
| 1srr_A | 124 | SPO0F, sporulation response regulatory protein; as | 99.83 | |
| 1dbw_A | 126 | Transcriptional regulatory protein FIXJ; doubly wo | 99.83 | |
| 3jte_A | 143 | Response regulator receiver protein; structural ge | 99.83 | |
| 1tmy_A | 120 | CHEY protein, TMY; chemotaxis, phosphoryl transfer | 99.83 | |
| 2pl1_A | 121 | Transcriptional regulatory protein PHOP; CHEY-like | 99.83 | |
| 3lua_A | 140 | Response regulator receiver protein; two-component | 99.83 | |
| 4e7p_A | 150 | Response regulator; DNA binding, cytosol, transcri | 99.83 | |
| 3m6m_D | 143 | Sensory/regulatory protein RPFC; RPFF, REC, enoyl- | 99.82 | |
| 1zgz_A | 122 | Torcad operon transcriptional regulatory protein; | 99.82 | |
| 3r0j_A | 250 | Possible two component system response transcript | 99.82 | |
| 3f6c_A | 134 | Positive transcription regulator EVGA; structural | 99.82 | |
| 3heb_A | 152 | Response regulator receiver domain protein (CHEY); | 99.82 | |
| 3kht_A | 144 | Response regulator; PSI-II, 11023K, structural gen | 99.82 | |
| 2jba_A | 127 | Phosphate regulon transcriptional regulatory PROT; | 99.82 | |
| 1mb3_A | 124 | Cell division response regulator DIVK; signal tran | 99.82 | |
| 3hv2_A | 153 | Response regulator/HD domain protein; PSI-2, NYSGX | 99.82 | |
| 3kto_A | 136 | Response regulator receiver protein; PSI-II,struct | 99.82 | |
| 3b2n_A | 133 | Uncharacterized protein Q99UF4; structural genomic | 99.82 | |
| 3eod_A | 130 | Protein HNR; response regulator, phosphoprotein, t | 99.82 | |
| 3hdv_A | 136 | Response regulator; PSI-II, structural genomics, P | 99.82 | |
| 2a9o_A | 120 | Response regulator; essential protein, YYCF/YYCG h | 99.82 | |
| 3cfy_A | 137 | Putative LUXO repressor protein; structural genomi | 99.82 | |
| 3grc_A | 140 | Sensor protein, kinase; protein structure initiati | 99.81 | |
| 1jbe_A | 128 | Chemotaxis protein CHEY; signaling protein; 1.08A | 99.81 | |
| 3hdg_A | 137 | Uncharacterized protein; two-component sensor acti | 99.81 | |
| 3i42_A | 127 | Response regulator receiver domain protein (CHEY- | 99.81 | |
| 1p6q_A | 129 | CHEY2; chemotaxis, signal transduction, response r | 99.81 | |
| 3dzd_A | 368 | Transcriptional regulator (NTRC family); sigma43 a | 99.81 | |
| 1dz3_A | 130 | Stage 0 sporulation protein A; response regulator, | 99.81 | |
| 3nhm_A | 133 | Response regulator; protein structure initiative I | 99.81 | |
| 1mvo_A | 136 | PHOP response regulator; phosphate regulon, transc | 99.81 | |
| 3snk_A | 135 | Response regulator CHEY-like protein; P-loop conta | 99.81 | |
| 1i3c_A | 149 | Response regulator RCP1; phytochrome, signaling pr | 99.81 | |
| 3cnb_A | 143 | DNA-binding response regulator, MERR family; signa | 99.81 | |
| 3c3m_A | 138 | Response regulator receiver protein; structural ge | 99.81 | |
| 3ilh_A | 146 | Two component response regulator; NYSGXRC, PSI-II, | 99.81 | |
| 1a04_A | 215 | Nitrate/nitrite response regulator protein NARL; s | 99.81 | |
| 1k66_A | 149 | Phytochrome response regulator RCPB; CHEY homologu | 99.81 | |
| 1zh2_A | 121 | KDP operon transcriptional regulatory protein KDPE | 99.8 | |
| 1kgs_A | 225 | DRRD, DNA binding response regulator D; DNA-bindin | 99.8 | |
| 1xhf_A | 123 | DYE resistance, aerobic respiration control protei | 99.8 | |
| 4dad_A | 146 | Putative pilus assembly-related protein; response | 99.8 | |
| 3eul_A | 152 | Possible nitrate/nitrite response transcriptional | 99.8 | |
| 2qxy_A | 142 | Response regulator; regulation of transcription, N | 99.8 | |
| 1k68_A | 140 | Phytochrome response regulator RCPA; phosphorylate | 99.8 | |
| 2qzj_A | 136 | Two-component response regulator; 11017X, PSI-II, | 99.8 | |
| 3luf_A | 259 | Two-component system response regulator/ggdef doma | 99.8 | |
| 2zay_A | 147 | Response regulator receiver protein; structural ge | 99.8 | |
| 3cu5_A | 141 | Two component transcriptional regulator, ARAC FAM; | 99.79 | |
| 2qr3_A | 140 | Two-component system response regulator; structura | 99.79 | |
| 3h5i_A | 140 | Response regulator/sensory box protein/ggdef domai | 99.79 | |
| 3cg4_A | 142 | Response regulator receiver domain protein (CHEY-; | 99.79 | |
| 3cz5_A | 153 | Two-component response regulator, LUXR family; str | 99.79 | |
| 3lte_A | 132 | Response regulator; structural genomics, PSI, prot | 99.79 | |
| 3n53_A | 140 | Response regulator receiver modulated diguanylate; | 99.79 | |
| 3n0r_A | 286 | Response regulator; sigma factor, receiver, two-co | 99.79 | |
| 3kcn_A | 151 | Adenylate cyclase homolog; SGX, PSI 2, structural | 99.79 | |
| 1ny5_A | 387 | Transcriptional regulator (NTRC family); AAA+ ATPa | 99.79 | |
| 3a10_A | 116 | Response regulator; phosphoacceptor, signaling pro | 99.79 | |
| 1dcf_A | 136 | ETR1 protein; beta-alpha five sandwich, transferas | 99.78 | |
| 3q9s_A | 249 | DNA-binding response regulator; DNA binding protei | 99.78 | |
| 2rjn_A | 154 | Response regulator receiver:metal-dependent phosph | 99.78 | |
| 2gkg_A | 127 | Response regulator homolog; social motility, recei | 99.78 | |
| 1yio_A | 208 | Response regulatory protein; transcription regulat | 99.78 | |
| 3cg0_A | 140 | Response regulator receiver modulated diguanylate | 99.78 | |
| 3eq2_A | 394 | Probable two-component response regulator; adaptor | 99.77 | |
| 1s8n_A | 205 | Putative antiterminator; RV1626, structural genomi | 99.77 | |
| 2ayx_A | 254 | Sensor kinase protein RCSC; two independent struct | 99.77 | |
| 1qkk_A | 155 | DCTD, C4-dicarboxylate transport transcriptional r | 99.77 | |
| 2qsj_A | 154 | DNA-binding response regulator, LUXR family; struc | 99.76 | |
| 3eqz_A | 135 | Response regulator; structural genomics, unknown f | 99.76 | |
| 2jk1_A | 139 | HUPR, hydrogenase transcriptional regulatory prote | 99.76 | |
| 1p2f_A | 220 | Response regulator; DRRB, OMPR/PHOB, transcription | 99.76 | |
| 2gwr_A | 238 | DNA-binding response regulator MTRA; two-component | 99.76 | |
| 2oqr_A | 230 | Sensory transduction protein REGX3; response regul | 99.76 | |
| 2qvg_A | 143 | Two component response regulator; NYSGXRC, PSI-2, | 99.75 | |
| 1w25_A | 459 | Stalked-cell differentiation controlling protein; | 99.75 | |
| 2rdm_A | 132 | Response regulator receiver protein; structural ge | 99.75 | |
| 1ys7_A | 233 | Transcriptional regulatory protein PRRA; response | 99.75 | |
| 3t8y_A | 164 | CHEB, chemotaxis response regulator protein-glutam | 99.75 | |
| 2qv0_A | 143 | Protein MRKE; structural genomics, transcription, | 99.75 | |
| 3c97_A | 140 | Signal transduction histidine kinase; structural g | 99.74 | |
| 3c3w_A | 225 | Two component transcriptional regulatory protein; | 99.74 | |
| 2pln_A | 137 | HP1043, response regulator; signaling protein; 1.8 | 99.73 | |
| 3klo_A | 225 | Transcriptional regulator VPST; REC domain, HTH do | 99.73 | |
| 3bre_A | 358 | Probable two-component response regulator; protein | 99.72 | |
| 2j48_A | 119 | Two-component sensor kinase; pseudo-receiver, circ | 99.72 | |
| 3kyj_B | 145 | CHEY6 protein, putative histidine protein kinase; | 99.71 | |
| 2b4a_A | 138 | BH3024; flavodoxin-like fold, structural genomics, | 99.7 | |
| 3sy8_A | 400 | ROCR; TIM barrel phosphodiesterase-A, transcriptio | 99.7 | |
| 1dc7_A | 124 | NTRC, nitrogen regulation protein; receiver domain | 99.69 | |
| 1qo0_D | 196 | AMIR; binding protein, gene regulator, receptor; 2 | 99.69 | |
| 2hqr_A | 223 | Putative transcriptional regulator; phosporylation | 99.67 | |
| 1a2o_A | 349 | CHEB methylesterase; bacterial chemotaxis, adaptat | 99.62 | |
| 3luf_A | 259 | Two-component system response regulator/ggdef doma | 99.61 | |
| 2vyc_A | 755 | Biodegradative arginine decarboxylase; pyridoxal p | 99.57 | |
| 3cwo_X | 237 | Beta/alpha-barrel protein based on 1THF and 1TMY; | 99.05 | |
| 1w25_A | 459 | Stalked-cell differentiation controlling protein; | 99.02 | |
| 3tm8_A | 328 | BD1817, uncharacterized protein; HD-GYP, phosphodi | 98.1 | |
| 2ogi_A | 196 | Hypothetical protein SAG1661; structural genomics, | 97.32 | |
| 2o08_A | 188 | BH1327 protein; putative HD superfamily hydrolase, | 97.31 | |
| 3ccg_A | 190 | HD superfamily hydrolase; NP_347894.1, HD domain, | 97.28 | |
| 3n75_A | 715 | LDC, lysine decarboxylase, inducible; pyridoxal-5' | 97.25 | |
| 3q7r_A | 121 | Transcriptional regulatory protein; CHXR, receiver | 97.08 | |
| 2ayx_A | 254 | Sensor kinase protein RCSC; two independent struct | 96.86 | |
| 3hc1_A | 305 | Uncharacterized HDOD domain protein; HDOD domain p | 96.56 | |
| 2yxb_A | 161 | Coenzyme B12-dependent mutase; alpha/beta, structu | 95.67 | |
| 3cwo_X | 237 | Beta/alpha-barrel protein based on 1THF and 1TMY; | 95.48 | |
| 3i7a_A | 281 | Putative metal-dependent phosphohydrolase; YP_9268 | 94.7 | |
| 3ogl_Q | 21 | JAZ1 incomplete degron peptide; leucine-rich repea | 94.57 | |
| 3q58_A | 229 | N-acetylmannosamine-6-phosphate 2-epimerase; TIM b | 92.32 | |
| 1wv2_A | 265 | Thiazole moeity, thiazole biosynthesis protein THI | 91.69 | |
| 3ogk_Q | 22 | JAZ1 incomplete degron peptide; leucine rich repea | 91.64 | |
| 1ccw_A | 137 | Protein (glutamate mutase); coenzyme B12, radical | 90.75 | |
| 2pq7_A | 220 | Predicted HD superfamily hydrolase; 104161995, HD | 90.3 | |
| 3igs_A | 232 | N-acetylmannosamine-6-phosphate 2-epimerase 2; ene | 90.2 | |
| 1vqr_A | 297 | Hypothetical protein CJ0248; HD-domain/pdease-like | 89.36 | |
| 1y80_A | 210 | Predicted cobalamin binding protein; corrinoid, fa | 89.24 | |
| 3b57_A | 209 | LIN1889 protein; Q92AN1, X-RAY, NESG, structural g | 89.16 | |
| 2hek_A | 371 | Hypothetical protein; predominantly alpha helical | 89.03 | |
| 2i2x_B | 258 | MTAC, methyltransferase 1; TIM barrel and helix bu | 88.94 | |
| 3m1t_A | 275 | Putative phosphohydrolase; structural genomics, jo | 88.49 | |
| 3dto_A | 223 | BH2835 protein; all alpha-helical protein, structu | 88.37 | |
| 2pjq_A | 231 | Uncharacterized protein LP_2664; LPR71, NESG, stru | 88.04 | |
| 3ljx_A | 288 | MMOQ response regulator; structural genomics, PSI- | 87.67 | |
| 3mem_A | 457 | Putative signal transduction protein; structural g | 87.49 | |
| 3ezx_A | 215 | MMCP 1, monomethylamine corrinoid protein 1; N ter | 87.46 | |
| 2qgs_A | 225 | Protein Se1688; alpha-helical protein, structural | 87.33 | |
| 3fkq_A | 373 | NTRC-like two-domain protein; RER070207001320, str | 85.88 | |
| 3djb_A | 223 | Hydrolase, HD family; all alpha-helical protein., | 85.75 | |
| 3gw7_A | 239 | Uncharacterized protein YEDJ; all alpha-helical pr | 85.33 | |
| 2htm_A | 268 | Thiazole biosynthesis protein THIG; thiamin biosyn | 85.23 | |
| 3kp1_A | 763 | D-ornithine aminomutase E component; 5 aminomutase | 85.22 | |
| 1xrs_B | 262 | D-lysine 5,6-aminomutase beta subunit; TIM barrel, | 84.02 | |
| 3qja_A | 272 | IGPS, indole-3-glycerol phosphate synthase; struct | 83.46 | |
| 2q14_A | 410 | Phosphohydrolase; BT4208, HD domain, structural ge | 82.54 | |
| 2dqb_A | 376 | Deoxyguanosinetriphosphate triphosphohydrolase, P; | 80.33 |
| >3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.9e-25 Score=209.35 Aligned_cols=121 Identities=25% Similarity=0.526 Sum_probs=113.3
Q ss_pred ccEEEEEecCHHHHHHHHHHHHhCCCE-EEEECCHHHHHHHHHcCCCCceEEEEeccCCCCCHHHHHHHHHhccCCCCCe
Q 042954 41 VLRVLLVEADDSTRQIISALLRKCGYR-VAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIP 119 (720)
Q Consensus 41 ~~rVLIVDDd~~~r~~L~~lL~~~gye-V~~A~sg~eAle~L~~~~~~pDLVLlDv~MP~~dGieLL~~Ir~~~~~p~ip 119 (720)
.+|||||||++.+|..++.+|+..||+ |..|.+|.+|+++++. ..|||||+|+.||+|||++++++||+....+++|
T Consensus 12 ~~rILiVDD~~~~r~~l~~~L~~~G~~~v~~a~~g~~al~~~~~--~~~DlillD~~MP~mdG~el~~~ir~~~~~~~ip 89 (134)
T 3to5_A 12 NMKILIVDDFSTMRRIVKNLLRDLGFNNTQEADDGLTALPMLKK--GDFDFVVTDWNMPGMQGIDLLKNIRADEELKHLP 89 (134)
T ss_dssp TCCEEEECSCHHHHHHHHHHHHHTTCCCEEEESSHHHHHHHHHH--HCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCC
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHcCCcEEEEECCHHHHHHHHHh--CCCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCe
Confidence 469999999999999999999999996 6679999999999987 4599999999999999999999999887778999
Q ss_pred EEEEeccCCHHHHHHHHHcCCcEEEeCCCCHHHHHHHHHHHHhh
Q 042954 120 VIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRR 163 (720)
Q Consensus 120 VIvLTs~~d~e~~~~Al~~GA~dYL~KP~~~~eL~~~l~~vlr~ 163 (720)
||++|++.+.+...+|++.||+|||.|||+.++|..+|++++++
T Consensus 90 vI~lTa~~~~~~~~~~~~~Ga~~yl~KP~~~~~L~~~i~~~l~R 133 (134)
T 3to5_A 90 VLMITAEAKREQIIEAAQAGVNGYIVKPFTAATLKEKLDKIFER 133 (134)
T ss_dssp EEEEESSCCHHHHHHHHHTTCCEEEESSCCHHHHHHHHHHHCC-
T ss_pred EEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999998764
|
| >3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A | Back alignment and structure |
|---|
| >3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C | Back alignment and structure |
|---|
| >3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0 | Back alignment and structure |
|---|
| >3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A | Back alignment and structure |
|---|
| >2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti} | Back alignment and structure |
|---|
| >3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A | Back alignment and structure |
|---|
| >2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B | Back alignment and structure |
|---|
| >3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1} | Back alignment and structure |
|---|
| >3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB} | Back alignment and structure |
|---|
| >3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi} | Back alignment and structure |
|---|
| >3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
| >1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E | Back alignment and structure |
|---|
| >1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A* | Back alignment and structure |
|---|
| >3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405} | Back alignment and structure |
|---|
| >1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y | Back alignment and structure |
|---|
| >2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A | Back alignment and structure |
|---|
| >3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum} | Back alignment and structure |
|---|
| >4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A | Back alignment and structure |
|---|
| >3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
| >1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1 | Back alignment and structure |
|---|
| >3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
| >3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12} | Back alignment and structure |
|---|
| >3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0 | Back alignment and structure |
|---|
| >3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0 | Back alignment and structure |
|---|
| >2jba_A Phosphate regulon transcriptional regulatory PROT; transcription factor, sensory transduction, phosphate regula transcription regulation; 1.45A {Escherichia coli} PDB: 2jba_B 1b00_A 2iyn_A 2jb9_A 1zes_A | Back alignment and structure |
|---|
| >1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A | Back alignment and structure |
|---|
| >3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5} | Back alignment and structure |
|---|
| >3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0 | Back alignment and structure |
|---|
| >3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus} | Back alignment and structure |
|---|
| >3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12} | Back alignment and structure |
|---|
| >3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0 | Back alignment and structure |
|---|
| >2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A* | Back alignment and structure |
|---|
| >3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
| >3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP} | Back alignment and structure |
|---|
| >1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ... | Back alignment and structure |
|---|
| >3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0 | Back alignment and structure |
|---|
| >3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0 | Back alignment and structure |
|---|
| >1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A | Back alignment and structure |
|---|
| >3dzd_A Transcriptional regulator (NTRC family); sigma43 activator, AAA+ ATPase, response regulator, transcriptional activator, ATP-binding; HET: ADP; 2.40A {Aquifex aeolicus} PDB: 1zit_A 2jrl_A | Back alignment and structure |
|---|
| >1dz3_A Stage 0 sporulation protein A; response regulator, domain swapping; 1.65A {Bacillus stearothermophilus} SCOP: c.23.1.1 PDB: 1qmp_A* | Back alignment and structure |
|---|
| >3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus} | Back alignment and structure |
|---|
| >1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1 | Back alignment and structure |
|---|
| >3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti} | Back alignment and structure |
|---|
| >1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A | Back alignment and structure |
|---|
| >3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea} | Back alignment and structure |
|---|
| >3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1} | Back alignment and structure |
|---|
| >3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
| >1a04_A Nitrate/nitrite response regulator protein NARL; signal transduction protein, response regulators, two- component systems; 2.20A {Escherichia coli} SCOP: a.4.6.2 c.23.1.1 PDB: 1rnl_A | Back alignment and structure |
|---|
| >1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1 | Back alignment and structure |
|---|
| >1zh2_A KDP operon transcriptional regulatory protein KDPE; two-component system, gene regulation, transcription factor, KDP potassium transport system; 2.00A {Escherichia coli} SCOP: c.23.1.1 PDB: 1zh4_A | Back alignment and structure |
|---|
| >1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A* | Back alignment and structure |
|---|
| >1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A | Back alignment and structure |
|---|
| >4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A | Back alignment and structure |
|---|
| >3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
| >2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima} | Back alignment and structure |
|---|
| >1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1 | Back alignment and structure |
|---|
| >2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile} | Back alignment and structure |
|---|
| >3luf_A Two-component system response regulator/ggdef domain protein; structural genomics, ASA_2441, PSI-2, protein structure initiative; HET: MSE; 1.76A {Aeromonas salmonicida} PDB: 3mf4_A* | Back alignment and structure |
|---|
| >2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans} | Back alignment and structure |
|---|
| >3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg} | Back alignment and structure |
|---|
| >2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis} | Back alignment and structure |
|---|
| >3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901} | Back alignment and structure |
|---|
| >3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1} | Back alignment and structure |
|---|
| >3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP} | Back alignment and structure |
|---|
| >3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri} | Back alignment and structure |
|---|
| >3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0 | Back alignment and structure |
|---|
| >3n0r_A Response regulator; sigma factor, receiver, two-component SI transduction, signaling protein; HET: MSE GOL; 1.25A {Caulobacter vibrioides} PDB: 3t0y_A | Back alignment and structure |
|---|
| >3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica} | Back alignment and structure |
|---|
| >1ny5_A Transcriptional regulator (NTRC family); AAA+ ATPase, sigma54 activator, bacterial transcription, DIM transcription; HET: ADP; 2.40A {Aquifex aeolicus} SCOP: c.23.1.1 c.37.1.20 PDB: 1ny6_A* 3m0e_A* 1zy2_A* | Back alignment and structure |
|---|
| >3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A* | Back alignment and structure |
|---|
| >1dcf_A ETR1 protein; beta-alpha five sandwich, transferase; 2.50A {Arabidopsis thaliana} SCOP: c.23.1.2 | Back alignment and structure |
|---|
| >3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans} | Back alignment and structure |
|---|
| >2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis} | Back alignment and structure |
|---|
| >2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A | Back alignment and structure |
|---|
| >1yio_A Response regulatory protein; transcription regulation, DNA binding protein; 2.20A {Pseudomonas fluorescens} SCOP: a.4.6.2 c.23.1.1 PDB: 1zn2_A | Back alignment and structure |
|---|
| >3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp} | Back alignment and structure |
|---|
| >3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A | Back alignment and structure |
|---|
| >1s8n_A Putative antiterminator; RV1626, structural genomics, transcriptional antiterminator, component system, PSI; 1.48A {Mycobacterium tuberculosis} SCOP: c.23.1.1 PDB: 1sd5_A | Back alignment and structure |
|---|
| >2ayx_A Sensor kinase protein RCSC; two independent structural domains, transferase; NMR {Escherichia coli} SCOP: c.23.1.1 c.23.1.6 PDB: 2ayz_A 2ayy_A | Back alignment and structure |
|---|
| >1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A | Back alignment and structure |
|---|
| >2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3} | Back alignment and structure |
|---|
| >3eqz_A Response regulator; structural genomics, unknown function, PSI-2, protein struct initiative; 2.15A {Colwellia psychrerythraea} SCOP: c.23.1.0 | Back alignment and structure |
|---|
| >2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B | Back alignment and structure |
|---|
| >1p2f_A Response regulator; DRRB, OMPR/PHOB, transcription; HET: MSE; 1.80A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nns_A* | Back alignment and structure |
|---|
| >2gwr_A DNA-binding response regulator MTRA; two-component regulatory system, transcription regulation, phosphorylation, OMPR family; 2.10A {Mycobacterium tuberculosis} PDB: 3nhz_A | Back alignment and structure |
|---|
| >2oqr_A Sensory transduction protein REGX3; response regulator, winged-helix-turn-helix, DNA-binding, 3D swapping, two component system; 2.03A {Mycobacterium tuberculosis H37RV} | Back alignment and structure |
|---|
| >2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
| >1w25_A Stalked-cell differentiation controlling protein; two-component system, ggdef domain, cyclic dinucleotide, cyclic-digmp; HET: C2E; 2.70A {Caulobacter vibrioides} SCOP: c.23.1.1 c.23.1.1 d.58.29.2 PDB: 2v0n_A* 2wb4_A* | Back alignment and structure |
|---|
| >2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae} | Back alignment and structure |
|---|
| >1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} SCOP: a.4.6.1 c.23.1.1 PDB: 1ys6_A | Back alignment and structure |
|---|
| >3t8y_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; CHEA, hydrolase; 1.90A {Thermotoga maritima} | Back alignment and structure |
|---|
| >2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae} | Back alignment and structure |
|---|
| >3c97_A Signal transduction histidine kinase; structural genomics, signaling, PSI-2, protein structure initiative; 1.70A {Aspergillus oryzae RIB40} | Back alignment and structure |
|---|
| >3c3w_A Two component transcriptional regulatory protein; response regulator, two-component regulatory system, DNA-BIN protein; 2.20A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
| >2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A | Back alignment and structure |
|---|
| >3klo_A Transcriptional regulator VPST; REC domain, HTH domain, DNA-binding, transcription regulation; HET: C2E TAR; 2.80A {Vibrio cholerae} PDB: 3kln_A* | Back alignment and structure |
|---|
| >3bre_A Probable two-component response regulator; protein-nucleotide complex, signaling protein; HET: C2E; 2.40A {Pseudomonas aeruginosa} PDB: 3i5a_A* | Back alignment and structure |
|---|
| >2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus} | Back alignment and structure |
|---|
| >3kyj_B CHEY6 protein, putative histidine protein kinase; protein-protein interaction, histidine kinase, response regulator, phosphorylation; 1.40A {Rhodobacter sphaeroides} PDB: 3kyi_B* | Back alignment and structure |
|---|
| >2b4a_A BH3024; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.42A {Bacillus halodurans} SCOP: c.23.1.1 | Back alignment and structure |
|---|
| >3sy8_A ROCR; TIM barrel phosphodiesterase-A, transcription regulator; HET: EPE; 2.50A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
| >1dc7_A NTRC, nitrogen regulation protein; receiver domain, phosphorylation, signal transduction, conformational rearrangement; NMR {Salmonella typhimurium} SCOP: c.23.1.1 PDB: 1j56_A 1krw_A 1krx_A 1ntr_A 1dc8_A* | Back alignment and structure |
|---|
| >1qo0_D AMIR; binding protein, gene regulator, receptor; 2.25A {Pseudomonas aeruginosa} SCOP: c.23.1.3 | Back alignment and structure |
|---|
| >2hqr_A Putative transcriptional regulator; phosporylation-independent response regulator, H. pylori, SY dimer, signaling protein; NMR {Helicobacter pylori} | Back alignment and structure |
|---|
| >1a2o_A CHEB methylesterase; bacterial chemotaxis, adaptation, serine hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.23.1.1 c.40.1.1 | Back alignment and structure |
|---|
| >3luf_A Two-component system response regulator/ggdef domain protein; structural genomics, ASA_2441, PSI-2, protein structure initiative; HET: MSE; 1.76A {Aeromonas salmonicida} PDB: 3mf4_A* | Back alignment and structure |
|---|
| >2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli} | Back alignment and structure |
|---|
| >3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A | Back alignment and structure |
|---|
| >1w25_A Stalked-cell differentiation controlling protein; two-component system, ggdef domain, cyclic dinucleotide, cyclic-digmp; HET: C2E; 2.70A {Caulobacter vibrioides} SCOP: c.23.1.1 c.23.1.1 d.58.29.2 PDB: 2v0n_A* 2wb4_A* | Back alignment and structure |
|---|
| >3tm8_A BD1817, uncharacterized protein; HD-GYP, phosphodiesterase, unknown function, hydrolase,signa protein; 1.28A {Bdellovibrio bacteriovorus} PDB: 3tmb_A 3tmc_A 3tmd_A | Back alignment and structure |
|---|
| >2ogi_A Hypothetical protein SAG1661; structural genomics, joint center for structural genomics, J protein structure initiative; HET: GDP MES; 1.85A {Streptococcus agalactiae serogroup V} | Back alignment and structure |
|---|
| >2o08_A BH1327 protein; putative HD superfamily hydrolase, structural genomics, JOIN for structural genomics, JCSG; HET: UNL PG4 DGI; 1.90A {Bacillus halodurans} | Back alignment and structure |
|---|
| >3ccg_A HD superfamily hydrolase; NP_347894.1, HD domain, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.50A {Clostridium acetobutylicum atcc 824} | Back alignment and structure |
|---|
| >3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A* | Back alignment and structure |
|---|
| >3q7r_A Transcriptional regulatory protein; CHXR, receiver domain, transcription factor, OMPR, chlamydia transcription; 1.60A {Chlamydia trachomatis} PDB: 3q7s_A* 3q7t_A | Back alignment and structure |
|---|
| >2ayx_A Sensor kinase protein RCSC; two independent structural domains, transferase; NMR {Escherichia coli} SCOP: c.23.1.1 c.23.1.6 PDB: 2ayz_A 2ayy_A | Back alignment and structure |
|---|
| >3hc1_A Uncharacterized HDOD domain protein; HDOD domain protein with unknown function, STRU genomics, joint center for structural genomics; 1.90A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
| >2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
| >3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A | Back alignment and structure |
|---|
| >3i7a_A Putative metal-dependent phosphohydrolase; YP_926882.1, STRU genomics, joint center for structural genomics, JCSG; 2.06A {Shewanella amazonensis SB2B} | Back alignment and structure |
|---|
| >3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp} | Back alignment and structure |
|---|
| >1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1 | Back alignment and structure |
|---|
| >3ogk_Q JAZ1 incomplete degron peptide; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} | Back alignment and structure |
|---|
| >1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A* | Back alignment and structure |
|---|
| >2pq7_A Predicted HD superfamily hydrolase; 104161995, HD domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.45A {Uncultured thermotogales bacterium} SCOP: a.211.1.1 | Back alignment and structure |
|---|
| >3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0 | Back alignment and structure |
|---|
| >1vqr_A Hypothetical protein CJ0248; HD-domain/pdease-like fold, structural genomics, joint cente structural genomics, JCSG; 2.25A {Campylobacter jejuni subsp} SCOP: a.211.1.3 | Back alignment and structure |
|---|
| >1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica} | Back alignment and structure |
|---|
| >3b57_A LIN1889 protein; Q92AN1, X-RAY, NESG, structural genomics, PSI-2, protein structure initiative; 3.00A {Listeria innocua CLIP11262} SCOP: a.211.1.1 | Back alignment and structure |
|---|
| >2hek_A Hypothetical protein; predominantly alpha helical protein with GDP binding site AN site being FAR from EACH other, structural genomics, PSI; HET: GDP; 2.00A {Aquifex aeolicus} SCOP: a.211.1.1 | Back alignment and structure |
|---|
| >2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri} | Back alignment and structure |
|---|
| >3m1t_A Putative phosphohydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE GOL; 1.62A {Shewanella amazonensis} SCOP: a.211.1.0 | Back alignment and structure |
|---|
| >3dto_A BH2835 protein; all alpha-helical protein, structural genomics, PSI-2, protein structure initiative; 3.30A {Bacillus halodurans} SCOP: a.211.1.1 | Back alignment and structure |
|---|
| >2pjq_A Uncharacterized protein LP_2664; LPR71, NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Lactobacillus plantarum WCFS1} SCOP: a.211.1.1 | Back alignment and structure |
|---|
| >3ljx_A MMOQ response regulator; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Methylococcus capsulatus} PDB: 3ljv_A 3p3q_A | Back alignment and structure |
|---|
| >3mem_A Putative signal transduction protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.25A {Marinobacter aquaeolei} | Back alignment and structure |
|---|
| >3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri} | Back alignment and structure |
|---|
| >2qgs_A Protein Se1688; alpha-helical protein, structural genomics, PSI-2, protein S initiative, northeast structural genomics consortium; 2.00A {Staphylococcus epidermidis} SCOP: a.211.1.1 | Back alignment and structure |
|---|
| >3fkq_A NTRC-like two-domain protein; RER070207001320, structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: ATP 2PE; 2.10A {Eubacterium rectale} | Back alignment and structure |
|---|
| >3djb_A Hydrolase, HD family; all alpha-helical protein., structural genomics, PSI-2, protein structure initiative; 2.90A {Bacillus thuringiensis serovarkonkukian} SCOP: a.211.1.1 | Back alignment and structure |
|---|
| >3gw7_A Uncharacterized protein YEDJ; all alpha-helical protein, structural genomics, PSI-2, protein structure initiative; 3.30A {Escherichia coli k-12} | Back alignment and structure |
|---|
| >2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
| >3kp1_A D-ornithine aminomutase E component; 5 aminomutase (OAM), metal binding protein; HET: PLP B12 5AD; 2.01A {Clostridium sticklandii} PDB: 3kow_A* 3koy_A* 3koz_A* 3kp0_A* 3kox_A* | Back alignment and structure |
|---|
| >1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1 | Back alignment and structure |
|---|
| >3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A* | Back alignment and structure |
|---|
| >2q14_A Phosphohydrolase; BT4208, HD domain, structural genomics, JO center for structural genomics, JCSG; HET: MSE ADP; 2.20A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
| >2dqb_A Deoxyguanosinetriphosphate triphosphohydrolase, P; dntpase, DNTP, single-stranded DNA, DNA dGTPase, HD superfamily, structural genomics; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 720 | ||||
| d1zesa1 | 121 | c.23.1.1 (A:3-123) PhoB receiver domain {Escherich | 2e-25 | |
| d1jbea_ | 128 | c.23.1.1 (A:) CheY protein {Escherichia coli [TaxI | 8e-25 | |
| d1dcfa_ | 134 | c.23.1.2 (A:) Receiver domain of the ethylene rece | 2e-23 | |
| d1peya_ | 119 | c.23.1.1 (A:) Sporulation response regulator Spo0F | 3e-23 | |
| d1dz3a_ | 123 | c.23.1.1 (A:) Sporulation response regulator Spo0A | 5e-23 | |
| d1krwa_ | 123 | c.23.1.1 (A:) NTRC receiver domain {Salmonella typ | 6e-23 | |
| d1mb3a_ | 123 | c.23.1.1 (A:) Cell division response regulator Div | 1e-22 | |
| d1k68a_ | 140 | c.23.1.1 (A:) Response regulator for cyanobacteria | 1e-22 | |
| d1p6qa_ | 129 | c.23.1.1 (A:) CheY protein {Sinorhizobium meliloti | 3e-22 | |
| d1u0sy_ | 118 | c.23.1.1 (Y:) CheY protein {Thermotoga maritima [T | 3e-22 | |
| d2a9pa1 | 117 | c.23.1.1 (A:2-118) DNA-binding response regulator | 2e-21 | |
| d1qkka_ | 140 | c.23.1.1 (A:) Transcriptional regulatory protein D | 4e-21 | |
| d2r25b1 | 128 | c.23.1.1 (B:1087-1214) Response regulator Sin1 {Ba | 6e-21 | |
| d1a04a2 | 138 | c.23.1.1 (A:5-142) Nitrate/nitrite response regula | 1e-20 | |
| d1i3ca_ | 144 | c.23.1.1 (A:) Response regulator for cyanobacteria | 1e-20 | |
| d1a2oa1 | 140 | c.23.1.1 (A:1-140) Methylesterase CheB, N-terminal | 1e-20 | |
| d1ny5a1 | 137 | c.23.1.1 (A:1-137) Transcriptional activator sigm5 | 2e-20 | |
| d1xhfa1 | 121 | c.23.1.1 (A:2-122) Aerobic respiration control pro | 2e-20 | |
| d1yioa2 | 128 | c.23.1.1 (A:3-130) Response regulatory protein Sty | 4e-20 | |
| d1zgza1 | 120 | c.23.1.1 (A:2-121) TorCAD operon transcriptional r | 5e-20 | |
| d1s8na_ | 190 | c.23.1.1 (A:) Probable two-component system transc | 6e-20 | |
| d2pl1a1 | 119 | c.23.1.1 (A:1-119) PhoP receiver domain {Escherich | 6e-20 | |
| d1dbwa_ | 123 | c.23.1.1 (A:) Transcriptional regulatory protein F | 7e-20 | |
| d2b4aa1 | 118 | c.23.1.1 (A:2-119) Hypothetical protein BH3024 {Ba | 9e-20 | |
| d2ayxa1 | 133 | c.23.1.1 (A:817-949) Sensor kinase protein RcsC, C | 2e-19 | |
| d1zh2a1 | 119 | c.23.1.1 (A:2-120) Transcriptional regulatory prot | 5e-19 | |
| d1mvoa_ | 121 | c.23.1.1 (A:) PhoP receiver domain {Bacillus subti | 5e-19 | |
| d1p2fa2 | 120 | c.23.1.1 (A:1-120) Response regulator DrrB {Thermo | 2e-18 | |
| d1ys7a2 | 121 | c.23.1.1 (A:7-127) Transcriptional regulatory prot | 9e-18 | |
| d1kgsa2 | 122 | c.23.1.1 (A:2-123) PhoB receiver domain {Thermotog | 1e-17 | |
| d1w25a1 | 139 | c.23.1.1 (A:2-140) Response regulator PleD, receiv | 2e-17 | |
| d1w25a2 | 153 | c.23.1.1 (A:141-293) Response regulator PleD, rece | 4e-17 | |
| d1k66a_ | 149 | c.23.1.1 (A:) Response regulator for cyanobacteria | 5e-17 | |
| d1qo0d_ | 189 | c.23.1.3 (D:) Positive regulator of the amidase op | 5e-16 |
| >d1zesa1 c.23.1.1 (A:3-123) PhoB receiver domain {Escherichia coli [TaxId: 562]} Length = 121 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: CheY-like family: CheY-related domain: PhoB receiver domain species: Escherichia coli [TaxId: 562]
Score = 99.6 bits (248), Expect = 2e-25
Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 2/121 (1%)
Query: 43 RVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISG 102
R+L+VE + R+++ +L + G++ D +A L DL+L + LP SG
Sbjct: 2 RILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNEPWP--DLILLDWMLPGGSG 59
Query: 103 FALLTLVMEHDVCKNIPVIMMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWR 162
+ + + ++IPV+M++ ++ + GA D++ KP EL + V R
Sbjct: 60 IQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVMR 119
Query: 163 R 163
R
Sbjct: 120 R 120
|
| >d1dcfa_ c.23.1.2 (A:) Receiver domain of the ethylene receptor {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 134 | Back information, alignment and structure |
|---|
| >d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]} Length = 119 | Back information, alignment and structure |
|---|
| >d1dz3a_ c.23.1.1 (A:) Sporulation response regulator Spo0A {Bacillus stearothermophilus [TaxId: 1422]} Length = 123 | Back information, alignment and structure |
|---|
| >d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]} Length = 123 | Back information, alignment and structure |
|---|
| >d1mb3a_ c.23.1.1 (A:) Cell division response regulator DivK {Caulobacter crescentus [TaxId: 155892]} Length = 123 | Back information, alignment and structure |
|---|
| >d1k68a_ c.23.1.1 (A:) Response regulator for cyanobacterial phytochrome {Calothrix sp. pcc 7601, RcpA [TaxId: 1188]} Length = 140 | Back information, alignment and structure |
|---|
| >d1p6qa_ c.23.1.1 (A:) CheY protein {Sinorhizobium meliloti, CheY2 [TaxId: 382]} Length = 129 | Back information, alignment and structure |
|---|
| >d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]} Length = 118 | Back information, alignment and structure |
|---|
| >d2a9pa1 c.23.1.1 (A:2-118) DNA-binding response regulator MicA, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]} Length = 117 | Back information, alignment and structure |
|---|
| >d1qkka_ c.23.1.1 (A:) Transcriptional regulatory protein DctD, receiver domain {Sinorhizobium meliloti [TaxId: 382]} Length = 140 | Back information, alignment and structure |
|---|
| >d2r25b1 c.23.1.1 (B:1087-1214) Response regulator Sin1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 128 | Back information, alignment and structure |
|---|
| >d1a04a2 c.23.1.1 (A:5-142) Nitrate/nitrite response regulator (NarL), receiver domain {Escherichia coli [TaxId: 562]} Length = 138 | Back information, alignment and structure |
|---|
| >d1i3ca_ c.23.1.1 (A:) Response regulator for cyanobacterial phytochrome {Synechocystis sp. PCC 6803, RCP1 [TaxId: 1148]} Length = 144 | Back information, alignment and structure |
|---|
| >d1a2oa1 c.23.1.1 (A:1-140) Methylesterase CheB, N-terminal domain {Salmonella typhimurium [TaxId: 90371]} Length = 140 | Back information, alignment and structure |
|---|
| >d1ny5a1 c.23.1.1 (A:1-137) Transcriptional activator sigm54 (NtrC1), N-terminal domain {Aquifex aeolicus [TaxId: 63363]} Length = 137 | Back information, alignment and structure |
|---|
| >d1xhfa1 c.23.1.1 (A:2-122) Aerobic respiration control protein ArcA, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 121 | Back information, alignment and structure |
|---|
| >d1yioa2 c.23.1.1 (A:3-130) Response regulatory protein StyR, N-terminal domain {Pseudomonas fluorescens [TaxId: 294]} Length = 128 | Back information, alignment and structure |
|---|
| >d1zgza1 c.23.1.1 (A:2-121) TorCAD operon transcriptional regulator TorD, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 120 | Back information, alignment and structure |
|---|
| >d1s8na_ c.23.1.1 (A:) Probable two-component system transcriptional regulator Rv1626 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 190 | Back information, alignment and structure |
|---|
| >d2pl1a1 c.23.1.1 (A:1-119) PhoP receiver domain {Escherichia coli [TaxId: 562]} Length = 119 | Back information, alignment and structure |
|---|
| >d1dbwa_ c.23.1.1 (A:) Transcriptional regulatory protein FixJ, receiver domain {Rhizobium meliloti [TaxId: 382]} Length = 123 | Back information, alignment and structure |
|---|
| >d2b4aa1 c.23.1.1 (A:2-119) Hypothetical protein BH3024 {Bacillus halodurans [TaxId: 86665]} Length = 118 | Back information, alignment and structure |
|---|
| >d2ayxa1 c.23.1.1 (A:817-949) Sensor kinase protein RcsC, C-terminal domain {Escherichia coli [TaxId: 562]} Length = 133 | Back information, alignment and structure |
|---|
| >d1zh2a1 c.23.1.1 (A:2-120) Transcriptional regulatory protein KdpE, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 119 | Back information, alignment and structure |
|---|
| >d1mvoa_ c.23.1.1 (A:) PhoP receiver domain {Bacillus subtilis [TaxId: 1423]} Length = 121 | Back information, alignment and structure |
|---|
| >d1p2fa2 c.23.1.1 (A:1-120) Response regulator DrrB {Thermotoga maritima [TaxId: 2336]} Length = 120 | Back information, alignment and structure |
|---|
| >d1ys7a2 c.23.1.1 (A:7-127) Transcriptional regulatory protein PrrA, N-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 121 | Back information, alignment and structure |
|---|
| >d1kgsa2 c.23.1.1 (A:2-123) PhoB receiver domain {Thermotoga maritima [TaxId: 2336]} Length = 122 | Back information, alignment and structure |
|---|
| >d1w25a1 c.23.1.1 (A:2-140) Response regulator PleD, receiver domain {Caulobacter crescentus [TaxId: 155892]} Length = 139 | Back information, alignment and structure |
|---|
| >d1w25a2 c.23.1.1 (A:141-293) Response regulator PleD, receiver domain {Caulobacter crescentus [TaxId: 155892]} Length = 153 | Back information, alignment and structure |
|---|
| >d1k66a_ c.23.1.1 (A:) Response regulator for cyanobacterial phytochrome {Calothrix sp. pcc 7601, RcpB [TaxId: 1188]} Length = 149 | Back information, alignment and structure |
|---|
| >d1qo0d_ c.23.1.3 (D:) Positive regulator of the amidase operon AmiR {Pseudomonas aeruginosa [TaxId: 287]} Length = 189 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 720 | |||
| d2pl1a1 | 119 | PhoP receiver domain {Escherichia coli [TaxId: 562 | 99.93 | |
| d1dbwa_ | 123 | Transcriptional regulatory protein FixJ, receiver | 99.92 | |
| d1zesa1 | 121 | PhoB receiver domain {Escherichia coli [TaxId: 562 | 99.92 | |
| d1mvoa_ | 121 | PhoP receiver domain {Bacillus subtilis [TaxId: 14 | 99.92 | |
| d1kgsa2 | 122 | PhoB receiver domain {Thermotoga maritima [TaxId: | 99.92 | |
| d1ny5a1 | 137 | Transcriptional activator sigm54 (NtrC1), N-termin | 99.92 | |
| d1peya_ | 119 | Sporulation response regulator Spo0F {Bacillus sub | 99.92 | |
| d1ys7a2 | 121 | Transcriptional regulatory protein PrrA, N-termina | 99.92 | |
| d1qkka_ | 140 | Transcriptional regulatory protein DctD, receiver | 99.92 | |
| d1krwa_ | 123 | NTRC receiver domain {Salmonella typhimurium [TaxI | 99.92 | |
| d1zh2a1 | 119 | Transcriptional regulatory protein KdpE, N-termina | 99.92 | |
| d1p2fa2 | 120 | Response regulator DrrB {Thermotoga maritima [TaxI | 99.91 | |
| d2a9pa1 | 117 | DNA-binding response regulator MicA, N-terminal do | 99.91 | |
| d1mb3a_ | 123 | Cell division response regulator DivK {Caulobacter | 99.91 | |
| d1xhfa1 | 121 | Aerobic respiration control protein ArcA, N-termin | 99.91 | |
| d1w25a1 | 139 | Response regulator PleD, receiver domain {Caulobac | 99.91 | |
| d1jbea_ | 128 | CheY protein {Escherichia coli [TaxId: 562]} | 99.9 | |
| d2ayxa1 | 133 | Sensor kinase protein RcsC, C-terminal domain {Esc | 99.9 | |
| d1u0sy_ | 118 | CheY protein {Thermotoga maritima [TaxId: 2336]} | 99.9 | |
| d1zgza1 | 120 | TorCAD operon transcriptional regulator TorD, N-te | 99.9 | |
| d1p6qa_ | 129 | CheY protein {Sinorhizobium meliloti, CheY2 [TaxId | 99.9 | |
| d2r25b1 | 128 | Response regulator Sin1 {Baker's yeast (Saccharomy | 99.9 | |
| d1a04a2 | 138 | Nitrate/nitrite response regulator (NarL), receive | 99.9 | |
| d1yioa2 | 128 | Response regulatory protein StyR, N-terminal domai | 99.9 | |
| d1s8na_ | 190 | Probable two-component system transcriptional regu | 99.9 | |
| d1k66a_ | 149 | Response regulator for cyanobacterial phytochrome | 99.89 | |
| d1k68a_ | 140 | Response regulator for cyanobacterial phytochrome | 99.89 | |
| d1i3ca_ | 144 | Response regulator for cyanobacterial phytochrome | 99.89 | |
| d1w25a2 | 153 | Response regulator PleD, receiver domain {Caulobac | 99.89 | |
| d1dz3a_ | 123 | Sporulation response regulator Spo0A {Bacillus ste | 99.89 | |
| d1dcfa_ | 134 | Receiver domain of the ethylene receptor {Thale cr | 99.88 | |
| d2b4aa1 | 118 | Hypothetical protein BH3024 {Bacillus halodurans [ | 99.85 | |
| d1a2oa1 | 140 | Methylesterase CheB, N-terminal domain {Salmonella | 99.83 | |
| d1qo0d_ | 189 | Positive regulator of the amidase operon AmiR {Pse | 99.8 | |
| d1ccwa_ | 137 | Glutamate mutase, small subunit {Clostridium cochl | 93.13 | |
| d2pq7a1 | 217 | Predicted hydrolase mes0020 {Uncultured thermotoga | 91.89 | |
| d1xrsb1 | 160 | D-lysine 5,6-aminomutase beta subunit KamE, C-term | 91.18 | |
| d7reqa2 | 168 | Methylmalonyl-CoA mutase alpha subunit, C-terminal | 90.97 | |
| d2qgsa1 | 216 | Uncharacterized protein SE1688 {Staphylococcus epi | 90.61 | |
| d3b57a1 | 201 | Uncharacterized protein Lin1889 {Listeria innocua | 88.51 | |
| d3dtoa1 | 212 | Uncharacterized protein BH2835 {Bacillus haloduran | 87.55 | |
| d3djba1 | 213 | Uncharacterized protein BT9727_1981 {Bacillus thur | 87.37 | |
| d2pjqa1 | 215 | Uncharacterized protein LP2664 {Lactobacillus plan | 87.03 | |
| d3bula2 | 156 | Methionine synthase, C-terminal domain {Escherichi | 84.27 | |
| d1r8ja2 | 135 | N-terminal domain of the circadian clock protein K | 82.36 |
| >d2pl1a1 c.23.1.1 (A:1-119) PhoP receiver domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: CheY-like family: CheY-related domain: PhoP receiver domain species: Escherichia coli [TaxId: 562]
Probab=99.93 E-value=2.2e-25 Score=203.30 Aligned_cols=118 Identities=25% Similarity=0.409 Sum_probs=113.4
Q ss_pred cEEEEEecCHHHHHHHHHHHHhCCCEEEEECCHHHHHHHHHcCCCCceEEEEeccCCCCCHHHHHHHHHhccCCCCCeEE
Q 042954 42 LRVLLVEADDSTRQIISALLRKCGYRVAAVPDGLAAWETLKCRPHSIDLVLTEVELPSISGFALLTLVMEHDVCKNIPVI 121 (720)
Q Consensus 42 ~rVLIVDDd~~~r~~L~~lL~~~gyeV~~A~sg~eAle~L~~~~~~pDLVLlDv~MP~~dGieLL~~Ir~~~~~p~ipVI 121 (720)
+|||||||++.++..++.+|+..||+|..|.+|.+|+++++. ..|||||+|+.||+++|++++++|++.. +.+|||
T Consensus 1 mrILvVDDd~~~~~~l~~~L~~~G~~v~~a~~g~eal~~l~~--~~~dliilD~~mP~~~G~e~~~~i~~~~--~~~pvi 76 (119)
T d2pl1a1 1 MRVLVVEDNALLRHHLKVQIQDAGHQVDDAEDAKEADYYLNE--HIPDIAIVDLGLPDEDGLSLIRRWRSND--VSLPIL 76 (119)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHH--SCCSEEEECSCCSSSCHHHHHHHHHHTT--CCSCEE
T ss_pred CEEEEEeCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHh--cccceeehhccCCCchhHHHHHHHHhcC--cccceE
Confidence 589999999999999999999999999999999999999988 4599999999999999999999999986 789999
Q ss_pred EEeccCCHHHHHHHHHcCCcEEEeCCCCHHHHHHHHHHHHhh
Q 042954 122 MMSLHDSISMVLKCMLKGAADFLIKPVRRNELRNLWQHVWRR 163 (720)
Q Consensus 122 vLTs~~d~e~~~~Al~~GA~dYL~KP~~~~eL~~~l~~vlr~ 163 (720)
++|++.+.+...+|++.||+|||.||++.++|..+|++++++
T Consensus 77 ~lt~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~v~~~lrR 118 (119)
T d2pl1a1 77 VLTARESWQDKVEVLSAGADDYVTKPFHIEEVMARMQALMRR 118 (119)
T ss_dssp EEESCCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred eeeccCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHcc
Confidence 999999999999999999999999999999999999999875
|
| >d1dbwa_ c.23.1.1 (A:) Transcriptional regulatory protein FixJ, receiver domain {Rhizobium meliloti [TaxId: 382]} | Back information, alignment and structure |
|---|
| >d1zesa1 c.23.1.1 (A:3-123) PhoB receiver domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1mvoa_ c.23.1.1 (A:) PhoP receiver domain {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d1kgsa2 c.23.1.1 (A:2-123) PhoB receiver domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1ny5a1 c.23.1.1 (A:1-137) Transcriptional activator sigm54 (NtrC1), N-terminal domain {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
| >d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d1ys7a2 c.23.1.1 (A:7-127) Transcriptional regulatory protein PrrA, N-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d1qkka_ c.23.1.1 (A:) Transcriptional regulatory protein DctD, receiver domain {Sinorhizobium meliloti [TaxId: 382]} | Back information, alignment and structure |
|---|
| >d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
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| >d1zh2a1 c.23.1.1 (A:2-120) Transcriptional regulatory protein KdpE, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1p2fa2 c.23.1.1 (A:1-120) Response regulator DrrB {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
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| >d2a9pa1 c.23.1.1 (A:2-118) DNA-binding response regulator MicA, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
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| >d1mb3a_ c.23.1.1 (A:) Cell division response regulator DivK {Caulobacter crescentus [TaxId: 155892]} | Back information, alignment and structure |
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| >d1xhfa1 c.23.1.1 (A:2-122) Aerobic respiration control protein ArcA, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1w25a1 c.23.1.1 (A:2-140) Response regulator PleD, receiver domain {Caulobacter crescentus [TaxId: 155892]} | Back information, alignment and structure |
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| >d2ayxa1 c.23.1.1 (A:817-949) Sensor kinase protein RcsC, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
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| >d1zgza1 c.23.1.1 (A:2-121) TorCAD operon transcriptional regulator TorD, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1p6qa_ c.23.1.1 (A:) CheY protein {Sinorhizobium meliloti, CheY2 [TaxId: 382]} | Back information, alignment and structure |
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| >d2r25b1 c.23.1.1 (B:1087-1214) Response regulator Sin1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1a04a2 c.23.1.1 (A:5-142) Nitrate/nitrite response regulator (NarL), receiver domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1yioa2 c.23.1.1 (A:3-130) Response regulatory protein StyR, N-terminal domain {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
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| >d1s8na_ c.23.1.1 (A:) Probable two-component system transcriptional regulator Rv1626 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
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| >d1k66a_ c.23.1.1 (A:) Response regulator for cyanobacterial phytochrome {Calothrix sp. pcc 7601, RcpB [TaxId: 1188]} | Back information, alignment and structure |
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| >d1k68a_ c.23.1.1 (A:) Response regulator for cyanobacterial phytochrome {Calothrix sp. pcc 7601, RcpA [TaxId: 1188]} | Back information, alignment and structure |
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| >d1i3ca_ c.23.1.1 (A:) Response regulator for cyanobacterial phytochrome {Synechocystis sp. PCC 6803, RCP1 [TaxId: 1148]} | Back information, alignment and structure |
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| >d1w25a2 c.23.1.1 (A:141-293) Response regulator PleD, receiver domain {Caulobacter crescentus [TaxId: 155892]} | Back information, alignment and structure |
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| >d1dz3a_ c.23.1.1 (A:) Sporulation response regulator Spo0A {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
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| >d1dcfa_ c.23.1.2 (A:) Receiver domain of the ethylene receptor {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
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| >d2b4aa1 c.23.1.1 (A:2-119) Hypothetical protein BH3024 {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
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| >d1a2oa1 c.23.1.1 (A:1-140) Methylesterase CheB, N-terminal domain {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
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| >d1qo0d_ c.23.1.3 (D:) Positive regulator of the amidase operon AmiR {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
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| >d1ccwa_ c.23.6.1 (A:) Glutamate mutase, small subunit {Clostridium cochlearium [TaxId: 1494]} | Back information, alignment and structure |
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| >d2pq7a1 a.211.1.1 (A:1-217) Predicted hydrolase mes0020 {Uncultured thermotogales bacterium [TaxId: 221214]} | Back information, alignment and structure |
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| >d1xrsb1 c.23.6.1 (B:102-261) D-lysine 5,6-aminomutase beta subunit KamE, C-terminal domain {Clostridium sticklandii [TaxId: 1511]} | Back information, alignment and structure |
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| >d7reqa2 c.23.6.1 (A:561-728) Methylmalonyl-CoA mutase alpha subunit, C-terminal domain {Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]} | Back information, alignment and structure |
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| >d2qgsa1 a.211.1.1 (A:1-216) Uncharacterized protein SE1688 {Staphylococcus epidermidis [TaxId: 1282]} | Back information, alignment and structure |
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| >d3b57a1 a.211.1.1 (A:1-201) Uncharacterized protein Lin1889 {Listeria innocua [TaxId: 1642]} | Back information, alignment and structure |
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| >d3dtoa1 a.211.1.1 (A:2-213) Uncharacterized protein BH2835 {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
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| >d3djba1 a.211.1.1 (A:2-214) Uncharacterized protein BT9727_1981 {Bacillus thuringiensis [TaxId: 1428]} | Back information, alignment and structure |
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| >d2pjqa1 a.211.1.1 (A:1-215) Uncharacterized protein LP2664 {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
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| >d3bula2 c.23.6.1 (A:741-896) Methionine synthase, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1r8ja2 c.23.1.5 (A:1-135) N-terminal domain of the circadian clock protein KaiA {Synechococcus elongatus [TaxId: 32046]} | Back information, alignment and structure |
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