Citrus Sinensis ID: 043621

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100---
Protein Sequence
MTSPPKPHQYSEYDKSGKPAKNHQPSNAELLSSAKLVADAAKDTLNSDHDKVDKTKVAHAAGDLLNAGSRYGNSKTNPSGGHKDSGGVYEDYLKIAEGLIRKH
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHccccccccccHHHcccHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mtsppkphqyseydksgkpaknhqpsnaellSSAKLVADAAKdtlnsdhdkvdktKVAHAAGDLLnagsrygnsktnpsgghkdsggvyEDYLKIAEGLIRKH
Flexible Loop (DISEMBL)
mtsppkphqyseydksgkpaKNHQPSNAELLSSAKLVADAAKDTlnsdhdkvdktKVAHAAGDLlnagsrygnsktnpsgghkdsggvyEDYLKIAEGLIRKH
Low Complexity Region (SEG)
MTSPPKPHQYSEYDKSGKPAKNHQPSNAELLSSAKLVADAAKDTLNSDHDKVDKTKVAHAAGDLLNAGSRYGNSKTNPSGGHKDSGGVYEDYLKIAEGLIRKH
Disordered region (IsUnstruct)
***************************************************************************************VYEDYLKIAE******
Disordered Region (DISOPRED)
***********************************LVA*******************AHAAGDLLNAGSRYG***********D**GVYEDYLKIAEGLI***
Disordered Region (DISEMBL)
**************************NAELLSSAKLVADAAKDTLNSDHDKVDKTKVAHAAGDLLNAGSRYGNSKTNPSGGHKDSGGVYEDYLKIAEGLIRKH
Disordered Region (DISPRO)
************************************************HDKVDKTKVAHAAGDLLNAGSRYGNSKTNPSGGHKDSGGVYEDYLKIAEGLIRK*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTSPPKPHQYSEYDKSGKPAKNHQPSNAELLSSAKLVADAAKDTLNSDHDKVDKTKVAHAAGDLLNAGSRYGNSKTNPSGGHKDSGGVYEDYLKIAEGLIRKH
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	103
359386144	148	HAP3-like protein [Citrus sinensis]	0.776	0.540	0.391	1e-10
225423539	140	PREDICTED: uncharacterized protein LOC10	0.825	0.607	0.335	1e-09
358248112	119	uncharacterized protein LOC100813859 [Gl	0.475	0.411	0.632	4e-08
224112154	140	predicted protein [Populus trichocarpa]	0.495	0.364	0.588	6e-08
449434740	143	PREDICTED: uncharacterized protein LOC10	0.757	0.545	0.365	4e-07
383932370	124	nodulin-like protein [Gossypium hirsutum	0.504	0.419	0.596	6e-07
356577129	125	PREDICTED: uncharacterized protein LOC10	0.466	0.384	0.562	7e-06
357113461	385	PREDICTED: uncharacterized protein LOC10	0.689	0.184	0.475	1e-05
293336229	437	uncharacterized protein LOC100382106 [Ze	0.582	0.137	0.530	1e-05
326517784	437	predicted protein [Hordeum vulgare subsp	0.689	0.162	0.475	2e-05

>gi|359386144|gb|AEV43361.1| HAP3-like protein [Citrus sinensis]

 Score = 70.5 bits (171), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/120 (39%), Positives = 59/120 (49%), Gaps = 40/120 (33%)

Query: 23  HQPSNAELLSSAKLVADAAKDTLNSDHDKVDKTKVAHAAGDLLNAGSRYGNSKTNP---- 78
           HQPSNAEL++SAK VA+AAK T + + DKVDK KVA AA +L+ AGS+YGN + N     
Sbjct: 29  HQPSNAELMASAKCVAEAAKATFSKESDKVDKAKVAGAAENLVAAGSKYGNLEENKYVDK 88

Query: 79  ------------------SGGHKDSGG------------------VYEDYLKIAEGLIRK 102
                             + GH   GG                   Y DYLK A+G + K
Sbjct: 89  AKDYLHQYHSSHSTAQTDTSGHSAQGGRDSSSVPSGGGGDEKSGGGYGDYLKTAQGFLNK 148

Source: Citrus sinensis

Species: Citrus sinensis

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225423539|ref|XP_002271911.1| PREDICTED: uncharacterized protein LOC100262861 [Vitis vinifera] gi|147815438|emb|CAN63832.1| hypothetical protein VITISV_009130 [Vitis vinifera]

 Score = 67.4 bits (163), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 43/128 (33%)

Query: 19  PAKNHQPSNAELLSSAKLVADAAKDTLNSDHDKVDKTKVAHAAGDLLNAGSRYG------ 72
           P K+HQPS++ELLSSAK+VA+AA+ + + + +KVDK++VA AA D+L A S YG      
Sbjct: 13  PQKHHQPSSSELLSSAKVVAEAAQASFHHESEKVDKSRVAGAAADILGAASHYGKLEEKS 72

Query: 73  -------------------NSKTNPSGGHKDSGGV------------------YEDYLKI 95
                              ++ T  + GH  +                     Y DYLK+
Sbjct: 73  FGKYVEKAETYLHQYQSSHSTTTTINSGHSTTNTTETHSSSHSGGGDSHSGGGYGDYLKM 132

Query: 96  AEGLIRKH 103
           AEG ++K+
Sbjct: 133 AEGFLKKY 140

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358248112|ref|NP_001239816.1| uncharacterized protein LOC100813859 [Glycine max] gi|255647164|gb|ACU24050.1| unknown [Glycine max]

 Score = 62.0 bits (149), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/49 (63%), Positives = 38/49 (77%)

Query: 24 QPSNAELLSSAKLVADAAKDTLNSDHDKVDKTKVAHAAGDLLNAGSRYG 72
          + S  EL++SAKLVA+AA+  L SD DKVDK KVA AAGDLL+A  +YG
Sbjct: 13 EQSTTELITSAKLVAEAAQSALKSDSDKVDKAKVADAAGDLLDAAGKYG 61

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224112154|ref|XP_002316101.1| predicted protein [Populus trichocarpa] gi|118481511|gb|ABK92698.1| unknown [Populus trichocarpa] gi|118484413|gb|ABK94083.1| unknown [Populus trichocarpa] gi|222865141|gb|EEF02272.1| predicted protein [Populus trichocarpa]

 Score = 61.2 bits (147), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 30/51 (58%), Positives = 39/51 (76%)

Query: 22 NHQPSNAELLSSAKLVADAAKDTLNSDHDKVDKTKVAHAAGDLLNAGSRYG 72
          + QP+ +ELLSSAKLVA AA+ +  S+ DK+D+ KVA AA DLL A S+YG
Sbjct: 13 DRQPTTSELLSSAKLVAGAAQSSFGSEGDKIDRAKVAGAAEDLLEAASKYG 63

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449434740|ref|XP_004135154.1| PREDICTED: uncharacterized protein LOC101213972 [Cucumis sativus] gi|449530179|ref|XP_004172073.1| PREDICTED: uncharacterized protein LOC101226038 [Cucumis sativus]

 Score = 58.9 bits (141), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/123 (36%), Positives = 55/123 (44%), Gaps = 45/123 (36%)

Query: 23  HQPSNAELLSSAKLVADAAKDTLNSDHDKVDKTKVAHAAGDLLNAGSRYGNSKTNPSGG- 81
           H+ S ++LLSSAKLVADAAK +     + VDK KVA A+ DLL A S YG  K NPS G 
Sbjct: 23  HKTSASDLLSSAKLVADAAKSSFGGGSESVDKGKVAGASADLLGAASDYG--KLNPSEGI 80

Query: 82  ------------------------------------------HKDSGGVYEDYLKIAEGL 99
                                                      +D G  + DYLK+AEG 
Sbjct: 81  GSYVEKAENYLHQYEKSHSAPHGSGSEPPKAEEPPKKENAAEKEDGGSGFGDYLKMAEGF 140

Query: 100 IRK 102
           I+K
Sbjct: 141 IKK 143

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|383932370|gb|AFH57282.1| nodulin-like protein [Gossypium hirsutum]

 Score = 58.2 bits (139), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 36/52 (69%)

Query: 21 KNHQPSNAELLSSAKLVADAAKDTLNSDHDKVDKTKVAHAAGDLLNAGSRYG 72
          ++ +   +ELLSSAKLVADAAK T N + DKVDK KVA A  DLL A   YG
Sbjct: 5  RDTKKGTSELLSSAKLVADAAKSTFNKESDKVDKGKVAGAGADLLGAAQHYG 56

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356577129|ref|XP_003556680.1| PREDICTED: uncharacterized protein LOC100804187 [Glycine max]

 Score = 54.7 bits (130), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 36/48 (75%)

Query: 24 QPSNAELLSSAKLVADAAKDTLNSDHDKVDKTKVAHAAGDLLNAGSRY 71
          + S  EL++SAKLVA+AA+  L  + DKVDK K+A AAGDLL+A  +Y
Sbjct: 14 EQSTTELIASAKLVAEAAQSALKRESDKVDKAKLADAAGDLLDAAGKY 61

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357113461|ref|XP_003558521.1| PREDICTED: uncharacterized protein LOC100841572 [Brachypodium distachyon]

 Score = 53.9 bits (128), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/80 (47%), Positives = 50/80 (62%), Gaps = 9/80 (11%)

Query: 19 PAKNHQPS---NAELLSSAKLVADAAKDTLNSDHD--KVDKTKVAHAAGDLLNAGSRYGN 73
          P + H+PS   + +L +SAKLVA+AAK  L  DH+  KVDK + A AA DLL+A S YG 
Sbjct: 16 PQQQHRPSGGGSGDLAASAKLVAEAAKAALQ-DHNLGKVDKGRTAEAAADLLHAASLYGK 74

Query: 74 SKTNPSGGHKDSGGVYEDYL 93
           +  P GG+ D     E+YL
Sbjct: 75 LEGKPMGGYIDKA---EEYL 91

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|293336229|ref|NP_001168338.1| uncharacterized protein LOC100382106 [Zea mays] gi|223947561|gb|ACN27864.1| unknown [Zea mays] gi|414865290|tpg|DAA43847.1| TPA: hypothetical protein ZEAMMB73_591269 [Zea mays]

 Score = 53.9 bits (128), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/66 (53%), Positives = 45/66 (68%), Gaps = 6/66 (9%)

Query: 22 NHQPS---NAELLSSAKLVADAAKDTLNSDH--DKVDKTKVAHAAGDLLNAGSRYGNSKT 76
           H+PS   + +L SSAKLVA+AAK  L  DH  +KVDK +VA AA DLL+A S+YG  + 
Sbjct: 17 QHRPSGGGSGDLASSAKLVAEAAKLALQ-DHSLEKVDKGRVAGAAADLLHAASQYGKLEG 75

Query: 77 NPSGGH 82
           P GG+
Sbjct: 76 KPVGGY 81

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326517784|dbj|BAK03810.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score = 52.8 bits (125), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/80 (47%), Positives = 50/80 (62%), Gaps = 9/80 (11%)

Query: 19 PAKNHQPS---NAELLSSAKLVADAAKDTLNSDHD--KVDKTKVAHAAGDLLNAGSRYGN 73
          P + H+PS   + +L +SAKLVA+AAK  L  DH+  KVDK + A AA DLL+A S YG 
Sbjct: 16 PPQQHRPSGGGSGDLAASAKLVAEAAKAALQ-DHNLGKVDKGRTAEAAADLLHAASLYGK 74

Query: 74 SKTNPSGGHKDSGGVYEDYL 93
           +  P GG+ +     EDYL
Sbjct: 75 LEGKPVGGYLNKA---EDYL 91

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	103
TAIR|locus:2063788	187	NRP1 "AT2G03440" [Arabidopsis	0.747	0.411	0.423	1.1e-09
TAIR|locus:2035837	155	AT1G13930 "AT1G13930" [Arabido	0.864	0.574	0.344	2.9e-09
UNIPROTKB|Q3ZBG4	280	HES1 "Transcription factor HES	0.533	0.196	0.389	0.00034
UNIPROTKB|Q14469	280	HES1 "Transcription factor HES	0.533	0.196	0.389	0.00034
UNIPROTKB|I3LM61	280	HES1 "Uncharacterized protein"	0.533	0.196	0.389	0.00034
RGD|62081	281	Hes1 "hairy and enhancer of sp	0.533	0.195	0.389	0.00034
MGI|MGI:104853	282	Hes1 "hairy and enhancer of sp	0.533	0.195	0.389	0.00034
UNIPROTKB|G3N2D5	304	HES1 "Transcription factor HES	0.533	0.180	0.389	0.00043

TAIR|locus:2063788 NRP1 "AT2G03440" [Arabidopsis thaliana (taxid:3702)]

 Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 39/92 (42%), Positives = 56/92 (60%)

Query:    18 KPAKN-----HQPS-NAELLSSAKLVADAAKDTLNSDHDKVDKTKVAHAAGDLLNAGSRY 71
             KP  N     H+P+ NAEL++SAK+VA+AA+     + DK+DK KVA A  D+L+A SRY
Sbjct:    50 KPVSNTDPTTHRPATNAELMASAKIVAEAAQAAARHESDKLDKAKVAGATADILDAASRY 109

Query:    72 GNSKTNPSGGHKDSGGVYEDYLKIAEGLIRKH 103
             G  K +      +  GV + YL+ AE  + K+
Sbjct:   110 G--KLD------EKSGVGQ-YLEKAEQYLHKY 132

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0009617 "response to bacterium" evidence=IEP

GO:0009408 "response to heat" evidence=IEP;IMP

GO:0009409 "response to cold" evidence=IEP

GO:0009738 "abscisic acid mediated signaling pathway" evidence=IMP

TAIR|locus:2035837 AT1G13930 "AT1G13930" [Arabidopsis thaliana (taxid:3702)]

 Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
 Identities = 32/93 (34%), Positives = 53/93 (56%)

Query:     2 TSPPKPHQYSEYDKSGKPAKNHQPSNAELLSSAKLVADAAKDTLNSDHDKVDKTKVAHAA 61
             ++P +P      +  G        +NAEL++SAK+VA+AA+    ++ DK+DK KVA A+
Sbjct:    14 STPEEPDHNKPVE--GTETATRPATNAELMASAKVVAEAAQAAARNESDKLDKGKVAGAS 71

Query:    62 GDLLNAGSRYGN-SKTNPSGGHKDSGGVY-EDY 92
              D+L+A  +YG   + + +G + D    Y  DY
Sbjct:    72 ADILDAAEKYGKFDEKSSTGQYLDKAEKYLNDY 104

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0046686 "response to cadmium ion" evidence=IEP;RCA

GO:0009651 "response to salt stress" evidence=RCA;IMP

GO:0006096 "glycolysis" evidence=RCA

GO:0006833 "water transport" evidence=RCA

GO:0006972 "hyperosmotic response" evidence=RCA

GO:0007030 "Golgi organization" evidence=RCA

GO:0009266 "response to temperature stimulus" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009805 "coumarin biosynthetic process" evidence=RCA

GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA

GO:0042744 "hydrogen peroxide catabolic process" evidence=RCA

UNIPROTKB|Q3ZBG4 HES1 "Transcription factor HES-1" [Bos taurus (taxid:9913)]

 Score = 78 (32.5 bits), Expect = 0.00034, Sum P(2) = 0.00034
 Identities = 23/59 (38%), Positives = 31/59 (52%)

Query:     2 TSPPKPHQYSEYDKSGKPA--KNHQPSNAELLSSAK-LVADAAKDTLNSDHDKVDKTKV 57
             T+P KP   SE+ KS KP   K  +    E LS  K L+ DA K   +S H K++K  +
Sbjct:    23 TTPDKPKTASEHRKSSKPIMEKRRRARINESLSQLKTLILDALKKD-SSRHSKLEKADI 80

GO:0021861 "forebrain radial glial cell differentiation" evidence=ISS

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=ISS

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=ISS

GO:0043565 "sequence-specific DNA binding" evidence=ISS

GO:2000978 "negative regulation of forebrain neuron differentiation" evidence=ISS

GO:0046427 "positive regulation of JAK-STAT cascade" evidence=ISS

GO:0043388 "positive regulation of DNA binding" evidence=ISS

GO:0007262 "STAT protein import into nucleus" evidence=ISS

GO:0071820 "N-box binding" evidence=ISS

GO:0001078 "RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription" evidence=ISS

GO:0042517 "positive regulation of tyrosine phosphorylation of Stat3 protein" evidence=ISS

GO:0006461 "protein complex assembly" evidence=ISS

GO:0042803 "protein homodimerization activity" evidence=ISS

GO:2000974 "negative regulation of pro-B cell differentiation" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0060253 "negative regulation of glial cell proliferation" evidence=ISS

GO:0048715 "negative regulation of oligodendrocyte differentiation" evidence=ISS

GO:0048711 "positive regulation of astrocyte differentiation" evidence=ISS

UNIPROTKB|Q14469 HES1 "Transcription factor HES-1" [Homo sapiens (taxid:9606)]

 Score = 78 (32.5 bits), Expect = 0.00034, Sum P(2) = 0.00034
 Identities = 23/59 (38%), Positives = 31/59 (52%)

Query:     2 TSPPKPHQYSEYDKSGKPA--KNHQPSNAELLSSAK-LVADAAKDTLNSDHDKVDKTKV 57
             T+P KP   SE+ KS KP   K  +    E LS  K L+ DA K   +S H K++K  +
Sbjct:    23 TTPDKPKTASEHRKSSKPIMEKRRRARINESLSQLKTLILDALKKD-SSRHSKLEKADI 80

GO:0001889 "liver development" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0007224 "smoothened signaling pathway" evidence=IEA

GO:0016477 "cell migration" evidence=IEA

GO:0021537 "telencephalon development" evidence=IEA

GO:0021555 "midbrain-hindbrain boundary morphogenesis" evidence=IEA

GO:0021557 "oculomotor nerve development" evidence=IEA

GO:0021558 "trochlear nerve development" evidence=IEA

GO:0021575 "hindbrain morphogenesis" evidence=IEA

GO:0021984 "adenohypophysis development" evidence=IEA

GO:0030324 "lung development" evidence=IEA

GO:0030513 "positive regulation of BMP signaling pathway" evidence=IEA

GO:0030901 "midbrain development" evidence=IEA

GO:0035019 "somatic stem cell maintenance" evidence=IEA

GO:0042102 "positive regulation of T cell proliferation" evidence=IEA

GO:0042668 "auditory receptor cell fate determination" evidence=IEA

GO:0045598 "regulation of fat cell differentiation" evidence=IEA

GO:0045608 "negative regulation of auditory receptor cell differentiation" evidence=IEA

GO:0045747 "positive regulation of Notch signaling pathway" evidence=IEA

GO:0046331 "lateral inhibition" evidence=IEA

GO:0048469 "cell maturation" evidence=IEA

GO:0048667 "cell morphogenesis involved in neuron differentiation" evidence=IEA

GO:0060164 "regulation of timing of neuron differentiation" evidence=IEA

GO:0060675 "ureteric bud morphogenesis" evidence=IEA

GO:0060716 "labyrinthine layer blood vessel development" evidence=IEA

GO:0061009 "common bile duct development" evidence=IEA

GO:0061106 "negative regulation of stomach neuroendocrine cell differentiation" evidence=IEA

GO:0072012 "glomerulus vasculature development" evidence=IEA

GO:0072049 "comma-shaped body morphogenesis" evidence=IEA

GO:0072050 "S-shaped body morphogenesis" evidence=IEA

GO:0072141 "renal interstitial cell development" evidence=IEA

GO:0072282 "metanephric nephron tubule morphogenesis" evidence=IEA

GO:0090102 "cochlea development" evidence=IEA

GO:2000227 "negative regulation of pancreatic A cell differentiation" evidence=IEA

GO:0007219 "Notch signaling pathway" evidence=IMP;IDA;TAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IDA

GO:0048711 "positive regulation of astrocyte differentiation" evidence=ISS

GO:0048715 "negative regulation of oligodendrocyte differentiation" evidence=ISS

GO:0060253 "negative regulation of glial cell proliferation" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:2000974 "negative regulation of pro-B cell differentiation" evidence=IMP

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IDA

GO:0042803 "protein homodimerization activity" evidence=ISS

GO:0006461 "protein complex assembly" evidence=ISS

GO:0042517 "positive regulation of tyrosine phosphorylation of Stat3 protein" evidence=ISS

GO:0001078 "RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription" evidence=ISS

GO:0071820 "N-box binding" evidence=ISS

GO:0007262 "STAT protein import into nucleus" evidence=ISS

GO:0043388 "positive regulation of DNA binding" evidence=ISS

GO:0046427 "positive regulation of JAK-STAT cascade" evidence=ISS

GO:2000978 "negative regulation of forebrain neuron differentiation" evidence=ISS

GO:0043565 "sequence-specific DNA binding" evidence=ISS

GO:0021861 "forebrain radial glial cell differentiation" evidence=ISS

GO:0097150 "neuronal stem cell maintenance" evidence=IEP

GO:2000737 "negative regulation of stem cell differentiation" evidence=IMP

GO:0008134 "transcription factor binding" evidence=NAS

GO:0003677 "DNA binding" evidence=TAS

GO:0007399 "nervous system development" evidence=TAS

GO:0031018 "endocrine pancreas development" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0042826 "histone deacetylase binding" evidence=IPI

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

GO:0003143 "embryonic heart tube morphogenesis" evidence=ISS

GO:0035910 "ascending aorta morphogenesis" evidence=ISS

GO:0045977 "positive regulation of mitotic cell cycle, embryonic" evidence=ISS

GO:0060412 "ventricular septum morphogenesis" evidence=ISS

GO:0003266 "regulation of secondary heart field cardioblast proliferation" evidence=ISS

GO:0061309 "cardiac neural crest cell development involved in outflow tract morphogenesis" evidence=ISS

GO:0003151 "outflow tract morphogenesis" evidence=ISS

GO:0003281 "ventricular septum development" evidence=ISS

GO:0008284 "positive regulation of cell proliferation" evidence=ISS

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISS

GO:0048538 "thymus development" evidence=ISS

GO:0048844 "artery morphogenesis" evidence=ISS

GO:0060037 "pharyngeal system development" evidence=ISS

GO:0097084 "vascular smooth muscle cell development" evidence=ISS

UNIPROTKB|I3LM61 HES1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 78 (32.5 bits), Expect = 0.00034, Sum P(2) = 0.00034
 Identities = 23/59 (38%), Positives = 31/59 (52%)

Query:     2 TSPPKPHQYSEYDKSGKPA--KNHQPSNAELLSSAK-LVADAAKDTLNSDHDKVDKTKV 57
             T+P KP   SE+ KS KP   K  +    E LS  K L+ DA K   +S H K++K  +
Sbjct:    23 TTPDKPKTASEHRKSSKPIMEKRRRARINESLSQLKTLILDALKKD-SSRHSKLEKADI 80

GO:2000974 "negative regulation of pro-B cell differentiation" evidence=IEA

GO:2000737 "negative regulation of stem cell differentiation" evidence=IEA

GO:2000227 "negative regulation of pancreatic A cell differentiation" evidence=IEA

GO:0097150 "neuronal stem cell maintenance" evidence=IEA

GO:0097084 "vascular smooth muscle cell development" evidence=IEA

GO:0090102 "cochlea development" evidence=IEA

GO:0072282 "metanephric nephron tubule morphogenesis" evidence=IEA

GO:0072141 "renal interstitial cell development" evidence=IEA

GO:0072050 "S-shaped body morphogenesis" evidence=IEA

GO:0072049 "comma-shaped body morphogenesis" evidence=IEA

GO:0072012 "glomerulus vasculature development" evidence=IEA

GO:0071820 "N-box binding" evidence=IEA

GO:0061309 "cardiac neural crest cell development involved in outflow tract morphogenesis" evidence=IEA

GO:0061106 "negative regulation of stomach neuroendocrine cell differentiation" evidence=IEA

GO:0061009 "common bile duct development" evidence=IEA

GO:0060716 "labyrinthine layer blood vessel development" evidence=IEA

GO:0060675 "ureteric bud morphogenesis" evidence=IEA

GO:0060412 "ventricular septum morphogenesis" evidence=IEA

GO:0060253 "negative regulation of glial cell proliferation" evidence=IEA

GO:0060164 "regulation of timing of neuron differentiation" evidence=IEA

GO:0060037 "pharyngeal system development" evidence=IEA

GO:0048715 "negative regulation of oligodendrocyte differentiation" evidence=IEA

GO:0048711 "positive regulation of astrocyte differentiation" evidence=IEA

GO:0048667 "cell morphogenesis involved in neuron differentiation" evidence=IEA

GO:0048538 "thymus development" evidence=IEA

GO:0048469 "cell maturation" evidence=IEA

GO:0046331 "lateral inhibition" evidence=IEA

GO:0045977 "positive regulation of mitotic cell cycle, embryonic" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0045747 "positive regulation of Notch signaling pathway" evidence=IEA

GO:0045608 "negative regulation of auditory receptor cell differentiation" evidence=IEA

GO:0045598 "regulation of fat cell differentiation" evidence=IEA

GO:0043388 "positive regulation of DNA binding" evidence=IEA

GO:0042826 "histone deacetylase binding" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0042668 "auditory receptor cell fate determination" evidence=IEA

GO:0042517 "positive regulation of tyrosine phosphorylation of Stat3 protein" evidence=IEA

GO:0042102 "positive regulation of T cell proliferation" evidence=IEA

GO:0035910 "ascending aorta morphogenesis" evidence=IEA

GO:0035019 "somatic stem cell maintenance" evidence=IEA

GO:0031016 "pancreas development" evidence=IEA

GO:0030901 "midbrain development" evidence=IEA

GO:0030513 "positive regulation of BMP signaling pathway" evidence=IEA

GO:0030324 "lung development" evidence=IEA

GO:0021984 "adenohypophysis development" evidence=IEA

GO:0021575 "hindbrain morphogenesis" evidence=IEA

GO:0021558 "trochlear nerve development" evidence=IEA

GO:0021557 "oculomotor nerve development" evidence=IEA

GO:0021555 "midbrain-hindbrain boundary morphogenesis" evidence=IEA

GO:0021537 "telencephalon development" evidence=IEA

GO:0016477 "cell migration" evidence=IEA

GO:0007262 "STAT protein import into nucleus" evidence=IEA

GO:0007224 "smoothened signaling pathway" evidence=IEA

GO:0007219 "Notch signaling pathway" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0006461 "protein complex assembly" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0003266 "regulation of secondary heart field cardioblast proliferation" evidence=IEA

GO:0003143 "embryonic heart tube morphogenesis" evidence=IEA

GO:0001889 "liver development" evidence=IEA

GO:0001078 "RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription" evidence=IEA

RGD|62081 Hes1 "hairy and enhancer of split 1 (Drosophila)" [Rattus norvegicus (taxid:10116)]

 Score = 78 (32.5 bits), Expect = 0.00034, Sum P(2) = 0.00034
 Identities = 23/59 (38%), Positives = 31/59 (52%)

Query:     2 TSPPKPHQYSEYDKSGKPA--KNHQPSNAELLSSAK-LVADAAKDTLNSDHDKVDKTKV 57
             T+P KP   SE+ KS KP   K  +    E LS  K L+ DA K   +S H K++K  +
Sbjct:    23 TTPDKPKTASEHRKSSKPIMEKRRRARINESLSQLKTLILDALKKD-SSRHSKLEKADI 80

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=ISO;IDA;IMP

GO:0000981 "sequence-specific DNA binding RNA polymerase II transcription factor activity" evidence=ISO

GO:0001078 "RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription" evidence=ISO;ISS

GO:0001701 "in utero embryonic development" evidence=ISO

GO:0001889 "liver development" evidence=ISO

GO:0003143 "embryonic heart tube morphogenesis" evidence=ISO

GO:0003151 "outflow tract morphogenesis" evidence=ISO

GO:0003266 "regulation of secondary heart field cardioblast proliferation" evidence=ISO

GO:0003281 "ventricular septum development" evidence=ISO

GO:0003677 "DNA binding" evidence=IEA;ISO

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISO

GO:0005515 "protein binding" evidence=IPI

GO:0005622 "intracellular" evidence=ISO

GO:0005634 "nucleus" evidence=IEA;ISO;ISS

GO:0005654 "nucleoplasm" evidence=TAS

GO:0005737 "cytoplasm" evidence=ISO

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=ISO

GO:0006461 "protein complex assembly" evidence=ISO;ISS

GO:0007155 "cell adhesion" evidence=ISO

GO:0007219 "Notch signaling pathway" evidence=ISO

GO:0007224 "smoothened signaling pathway" evidence=ISO

GO:0007262 "STAT protein import into nucleus" evidence=ISO;ISS

GO:0007389 "pattern specification process" evidence=ISO

GO:0008284 "positive regulation of cell proliferation" evidence=ISO

GO:0016477 "cell migration" evidence=ISO

GO:0021537 "telencephalon development" evidence=ISO

GO:0021555 "midbrain-hindbrain boundary morphogenesis" evidence=ISO

GO:0021557 "oculomotor nerve development" evidence=ISO

GO:0021558 "trochlear nerve development" evidence=ISO

GO:0021575 "hindbrain morphogenesis" evidence=ISO

GO:0021861 "forebrain radial glial cell differentiation" evidence=IDA

GO:0021915 "neural tube development" evidence=ISO

GO:0021983 "pituitary gland development" evidence=ISO

GO:0021984 "adenohypophysis development" evidence=ISO

GO:0030324 "lung development" evidence=ISO

GO:0030513 "positive regulation of BMP signaling pathway" evidence=ISO

GO:0030901 "midbrain development" evidence=ISO

GO:0031016 "pancreas development" evidence=ISO

GO:0035019 "somatic stem cell maintenance" evidence=ISO

GO:0035909 "aorta morphogenesis" evidence=ISO

GO:0035910 "ascending aorta morphogenesis" evidence=ISO

GO:0042102 "positive regulation of T cell proliferation" evidence=ISO

GO:0042491 "auditory receptor cell differentiation" evidence=ISO

GO:0042517 "positive regulation of tyrosine phosphorylation of Stat3 protein" evidence=ISO;ISS

GO:0042668 "auditory receptor cell fate determination" evidence=ISO

GO:0042803 "protein homodimerization activity" evidence=ISO;ISS

GO:0042826 "histone deacetylase binding" evidence=ISO

GO:0043388 "positive regulation of DNA binding" evidence=ISO;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IDA

GO:0045165 "cell fate commitment" evidence=ISO

GO:0045596 "negative regulation of cell differentiation" evidence=ISO

GO:0045598 "regulation of fat cell differentiation" evidence=ISO

GO:0045608 "negative regulation of auditory receptor cell differentiation" evidence=ISO

GO:0045665 "negative regulation of neuron differentiation" evidence=ISO

GO:0045747 "positive regulation of Notch signaling pathway" evidence=ISO

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=ISO;IDA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=ISO

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISO

GO:0045977 "positive regulation of mitotic cell cycle, embryonic" evidence=ISO

GO:0046331 "lateral inhibition" evidence=ISO

GO:0046427 "positive regulation of JAK-STAT cascade" evidence=ISO;ISS

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0048469 "cell maturation" evidence=ISO

GO:0048505 "regulation of timing of cell differentiation" evidence=ISO

GO:0048538 "thymus development" evidence=ISO

GO:0048667 "cell morphogenesis involved in neuron differentiation" evidence=ISO

GO:0048711 "positive regulation of astrocyte differentiation" evidence=ISO;ISS

GO:0048715 "negative regulation of oligodendrocyte differentiation" evidence=ISO;ISS

GO:0048844 "artery morphogenesis" evidence=ISO

GO:0050767 "regulation of neurogenesis" evidence=ISO

GO:0060037 "pharyngeal system development" evidence=ISO

GO:0060164 "regulation of timing of neuron differentiation" evidence=ISO

GO:0060253 "negative regulation of glial cell proliferation" evidence=ISO;ISS

GO:0060412 "ventricular septum morphogenesis" evidence=ISO

GO:0060716 "labyrinthine layer blood vessel development" evidence=ISO

GO:0061009 "common bile duct development" evidence=ISO

GO:0061106 "negative regulation of stomach neuroendocrine cell differentiation" evidence=ISO

GO:0061309 "cardiac neural crest cell development involved in outflow tract morphogenesis" evidence=ISO

GO:0071820 "N-box binding" evidence=ISO;ISS

GO:0090102 "cochlea development" evidence=ISO

GO:0097084 "vascular smooth muscle cell development" evidence=ISO

GO:0097150 "neuronal stem cell maintenance" evidence=ISO;IDA

GO:2000227 "negative regulation of pancreatic A cell differentiation" evidence=ISO

GO:2000737 "negative regulation of stem cell differentiation" evidence=ISO

GO:2000974 "negative regulation of pro-B cell differentiation" evidence=ISO;ISS

GO:2000978 "negative regulation of forebrain neuron differentiation" evidence=IDA

GO:2000981 "negative regulation of inner ear receptor cell differentiation" evidence=ISO

MGI|MGI:104853 Hes1 "hairy and enhancer of split 1 (Drosophila)" [Mus musculus (taxid:10090)]

 Score = 78 (32.5 bits), Expect = 0.00034, Sum P(2) = 0.00034
 Identities = 23/59 (38%), Positives = 31/59 (52%)

Query:     2 TSPPKPHQYSEYDKSGKPA--KNHQPSNAELLSSAK-LVADAAKDTLNSDHDKVDKTKV 57
             T+P KP   SE+ KS KP   K  +    E LS  K L+ DA K   +S H K++K  +
Sbjct:    23 TTPDKPKTASEHRKSSKPIMEKRRRARINESLSQLKTLILDALKKD-SSRHSKLEKADI 80

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=ISO;IGI;IMP;IDA

GO:0000981 "sequence-specific DNA binding RNA polymerase II transcription factor activity" evidence=IDA

GO:0001078 "RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription" evidence=IDA

GO:0001701 "in utero embryonic development" evidence=IGI

GO:0001889 "liver development" evidence=IMP

GO:0003143 "embryonic heart tube morphogenesis" evidence=IMP

GO:0003151 "outflow tract morphogenesis" evidence=IMP

GO:0003266 "regulation of secondary heart field cardioblast proliferation" evidence=IMP

GO:0003281 "ventricular septum development" evidence=IMP

GO:0003677 "DNA binding" evidence=IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISO

GO:0005515 "protein binding" evidence=IPI

GO:0005622 "intracellular" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=IGI

GO:0006461 "protein complex assembly" evidence=IDA

GO:0007155 "cell adhesion" evidence=IGI

GO:0007219 "Notch signaling pathway" evidence=ISO;NAS;TAS

GO:0007224 "smoothened signaling pathway" evidence=IDA

GO:0007262 "STAT protein import into nucleus" evidence=IDA

GO:0007389 "pattern specification process" evidence=IGI;IMP

GO:0008134 "transcription factor binding" evidence=NAS

GO:0008284 "positive regulation of cell proliferation" evidence=IMP

GO:0016477 "cell migration" evidence=IGI

GO:0021537 "telencephalon development" evidence=IGI;IMP

GO:0021555 "midbrain-hindbrain boundary morphogenesis" evidence=IGI

GO:0021557 "oculomotor nerve development" evidence=IGI

GO:0021558 "trochlear nerve development" evidence=IGI

GO:0021575 "hindbrain morphogenesis" evidence=IGI

GO:0021861 "forebrain radial glial cell differentiation" evidence=ISO

GO:0021915 "neural tube development" evidence=IGI

GO:0021983 "pituitary gland development" evidence=IGI;IMP

GO:0021984 "adenohypophysis development" evidence=IMP

GO:0030324 "lung development" evidence=IMP

GO:0030513 "positive regulation of BMP signaling pathway" evidence=IGI

GO:0030901 "midbrain development" evidence=IGI

GO:0031016 "pancreas development" evidence=IMP

GO:0035019 "somatic stem cell maintenance" evidence=IMP

GO:0035909 "aorta morphogenesis" evidence=IMP

GO:0035910 "ascending aorta morphogenesis" evidence=IMP

GO:0042102 "positive regulation of T cell proliferation" evidence=IMP

GO:0042491 "auditory receptor cell differentiation" evidence=IMP

GO:0042517 "positive regulation of tyrosine phosphorylation of Stat3 protein" evidence=IDA

GO:0042668 "auditory receptor cell fate determination" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=IDA

GO:0042826 "histone deacetylase binding" evidence=ISO

GO:0043388 "positive regulation of DNA binding" evidence=IDA

GO:0043565 "sequence-specific DNA binding" evidence=ISO

GO:0045165 "cell fate commitment" evidence=IMP

GO:0045596 "negative regulation of cell differentiation" evidence=IMP

GO:0045598 "regulation of fat cell differentiation" evidence=IMP

GO:0045608 "negative regulation of auditory receptor cell differentiation" evidence=IMP

GO:0045665 "negative regulation of neuron differentiation" evidence=IGI;IMP

GO:0045747 "positive regulation of Notch signaling pathway" evidence=IMP

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=ISO;IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IMP

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IGI;IMP

GO:0045977 "positive regulation of mitotic cell cycle, embryonic" evidence=IMP

GO:0046331 "lateral inhibition" evidence=IMP

GO:0046427 "positive regulation of JAK-STAT cascade" evidence=IDA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0048469 "cell maturation" evidence=IGI

GO:0048505 "regulation of timing of cell differentiation" evidence=IMP

GO:0048538 "thymus development" evidence=IMP

GO:0048667 "cell morphogenesis involved in neuron differentiation" evidence=IGI

GO:0048711 "positive regulation of astrocyte differentiation" evidence=IDA

GO:0048715 "negative regulation of oligodendrocyte differentiation" evidence=IDA

GO:0048844 "artery morphogenesis" evidence=IMP

GO:0050767 "regulation of neurogenesis" evidence=IGI

GO:0060037 "pharyngeal system development" evidence=IMP

GO:0060164 "regulation of timing of neuron differentiation" evidence=IGI;IMP

GO:0060253 "negative regulation of glial cell proliferation" evidence=IDA

GO:0060412 "ventricular septum morphogenesis" evidence=IMP

GO:0060716 "labyrinthine layer blood vessel development" evidence=IMP

GO:0061009 "common bile duct development" evidence=IMP

GO:0061106 "negative regulation of stomach neuroendocrine cell differentiation" evidence=IMP

GO:0061309 "cardiac neural crest cell development involved in outflow tract morphogenesis" evidence=IMP

GO:0071820 "N-box binding" evidence=IDA

GO:0090102 "cochlea development" evidence=IGI;IMP

GO:0097084 "vascular smooth muscle cell development" evidence=IMP

GO:0097150 "neuronal stem cell maintenance" evidence=ISO;IMP

GO:2000227 "negative regulation of pancreatic A cell differentiation" evidence=IMP

GO:2000737 "negative regulation of stem cell differentiation" evidence=ISO

GO:2000974 "negative regulation of pro-B cell differentiation" evidence=ISO

GO:2000978 "negative regulation of forebrain neuron differentiation" evidence=ISO

GO:2000981 "negative regulation of inner ear receptor cell differentiation" evidence=IMP

UNIPROTKB|G3N2D5 HES1 "Transcription factor HES-1" [Bos taurus (taxid:9913)]

 Score = 78 (32.5 bits), Expect = 0.00043, Sum P(2) = 0.00043
 Identities = 23/59 (38%), Positives = 31/59 (52%)

Query:     2 TSPPKPHQYSEYDKSGKPA--KNHQPSNAELLSSAK-LVADAAKDTLNSDHDKVDKTKV 57
             T+P KP   SE+ KS KP   K  +    E LS  K L+ DA K   +S H K++K  +
Sbjct:    23 TTPDKPKTASEHRKSSKPIMEKRRRARINESLSQLKTLILDALKKD-SSRHSKLEKADI 80

GO:2000974 "negative regulation of pro-B cell differentiation" evidence=IEA

GO:2000737 "negative regulation of stem cell differentiation" evidence=IEA

GO:2000227 "negative regulation of pancreatic A cell differentiation" evidence=IEA

GO:0097150 "neuronal stem cell maintenance" evidence=IEA

GO:0097084 "vascular smooth muscle cell development" evidence=IEA

GO:0090102 "cochlea development" evidence=IEA

GO:0072282 "metanephric nephron tubule morphogenesis" evidence=IEA

GO:0072141 "renal interstitial cell development" evidence=IEA

GO:0072050 "S-shaped body morphogenesis" evidence=IEA

GO:0072049 "comma-shaped body morphogenesis" evidence=IEA

GO:0072012 "glomerulus vasculature development" evidence=IEA

GO:0071820 "N-box binding" evidence=IEA

GO:0061309 "cardiac neural crest cell development involved in outflow tract morphogenesis" evidence=IEA

GO:0061106 "negative regulation of stomach neuroendocrine cell differentiation" evidence=IEA

GO:0061009 "common bile duct development" evidence=IEA

GO:0060716 "labyrinthine layer blood vessel development" evidence=IEA

GO:0060675 "ureteric bud morphogenesis" evidence=IEA

GO:0060412 "ventricular septum morphogenesis" evidence=IEA

GO:0060253 "negative regulation of glial cell proliferation" evidence=IEA

GO:0060164 "regulation of timing of neuron differentiation" evidence=IEA

GO:0060037 "pharyngeal system development" evidence=IEA

GO:0048715 "negative regulation of oligodendrocyte differentiation" evidence=IEA

GO:0048711 "positive regulation of astrocyte differentiation" evidence=IEA

GO:0048667 "cell morphogenesis involved in neuron differentiation" evidence=IEA

GO:0048538 "thymus development" evidence=IEA

GO:0048469 "cell maturation" evidence=IEA

GO:0046331 "lateral inhibition" evidence=IEA

GO:0045977 "positive regulation of mitotic cell cycle, embryonic" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0045747 "positive regulation of Notch signaling pathway" evidence=IEA

GO:0045608 "negative regulation of auditory receptor cell differentiation" evidence=IEA

GO:0045598 "regulation of fat cell differentiation" evidence=IEA

GO:0043388 "positive regulation of DNA binding" evidence=IEA

GO:0042826 "histone deacetylase binding" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0042668 "auditory receptor cell fate determination" evidence=IEA

GO:0042517 "positive regulation of tyrosine phosphorylation of Stat3 protein" evidence=IEA

GO:0042102 "positive regulation of T cell proliferation" evidence=IEA

GO:0035910 "ascending aorta morphogenesis" evidence=IEA

GO:0035019 "somatic stem cell maintenance" evidence=IEA

GO:0031016 "pancreas development" evidence=IEA

GO:0030901 "midbrain development" evidence=IEA

GO:0030513 "positive regulation of BMP signaling pathway" evidence=IEA

GO:0030324 "lung development" evidence=IEA

GO:0021984 "adenohypophysis development" evidence=IEA

GO:0021575 "hindbrain morphogenesis" evidence=IEA

GO:0021558 "trochlear nerve development" evidence=IEA

GO:0021557 "oculomotor nerve development" evidence=IEA

GO:0021555 "midbrain-hindbrain boundary morphogenesis" evidence=IEA

GO:0021537 "telencephalon development" evidence=IEA

GO:0016477 "cell migration" evidence=IEA

GO:0007262 "STAT protein import into nucleus" evidence=IEA

GO:0007224 "smoothened signaling pathway" evidence=IEA

GO:0007219 "Notch signaling pathway" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0006461 "protein complex assembly" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0003266 "regulation of secondary heart field cardioblast proliferation" evidence=IEA

GO:0003143 "embryonic heart tube morphogenesis" evidence=IEA

GO:0001889 "liver development" evidence=IEA

GO:0001078 "RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_Genewise1_v1.C_LG_X0897 SubName- Full=Putative uncharacterized protein; (141 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00