Citrus Sinensis ID: 044559

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-----
MDTKIGSLDTCKPPCSDLASPPNGAVSTIQSSVPATPLVNPSESTLGRHLARRLVQIGATDVFSVPGDFNLTLLDHLIAEPGLNLIGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCYQAVVNNLEDAHELIDTAVSTALKESKPVYISVACNLPAIPHPTFSREPVPFSLSPKLSNEMGLEAAVEAAAEFLNKAVKPVLVAGPKMRVAKACNAFVELADACGYAVAVMPSAKGLVPEHHPHFIGTYWGAVSTAFFSVGYSLLLKKEKAVILQPDRVVIANGPAFGCVLMKDFLKALSKRLKSNTTAYENYHRIYVPEGQPPKCEPKEPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDDTSKELLEWGSRVSAANSRPPNPQ
cccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccEEEEccccccHHHHHcccccccccEEEcccHHHHHHHHHHHHHcccccEEEEcccccHHHHHHHHHHHccccccEEEEEccccccccccccEEEEEccccccHHHHccccccEEEEEEEccHHHHHHHHHHHHHHHHHccccEEEEccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccEEEEcccccccccHHHHHHHHHHHcccHHHcccccccccccccccEEEEcccccccccccccEEEcccccEEEEEcccEEEccccccccccHHHHHHHHHHHHccccccccccccccccccccccccccccccHHHHHHHHHHHcccccEEEEcccHHHHHccccccccccEEEEccccccHHHHHHHHHHHHHHcccccEEEEEcHHHHHHHHHHHHHHHHccccEEEEEEEccccEEEEEEccccccccccccHHHHHHHHccccccEEEEEEccHHHHHHHHHHccccccccEEEEEEEEccccccHHHHHHHHHHHHHcccccccc
ccccEcccccccccccccccccccccccccccccccccccccEEEHHHHHHHHHHHccccEEEEccccccHHHHHHHHcccccEEEEcccHHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHccccEEEEEEEccHHHcccccEcccccccccccHHHHHHccccccEEEEccHHHHHHHHHHHHHHHHHHcccEEEEEEHHHcccEcEccEEccHHHHHccccccHHHHHHHHHHHHHHHcccccEEEEEcccccccccHHHHHHHHHHHcccEEEEHHHccccccccccEEEEEcHHHccccccccHHHHccccEEEEEEccccEEcccccccccEHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEccHHHHHHHHHHcccccEEEEEcccHHHHHHHccccccccEEEEcccccccccHHHHHHHHHHHccccEEEEEEEHHHHHHHHHHHHHHHHcccccEEEEEEccccHHHHcccccHHHccccccHHHHHHHHHccccccEEEEEccHHHHHHHHHHHHHHcccccEEEEEEEcccccccccccccccHHHHcccccccc
mdtkigsldtckppcsdlasppngavstiqssvpatplvnpsestlGRHLARRLVQIgatdvfsvpgdfnlTLLDHLiaepglnligccnelnagyaadgyarsrgvGACVVTFTVGGLSVLNAIAGaysenlplicivggpnsndygtnrilhhtiglpdfsqelrcfQTVTCYQAVVNNLEDAHELIDTAVSTALKESKPVYISVacnlpaiphptfsrepvpfslspklsneMGLEAAVEAAAEFLNKAVKPVLVAGPKMRVAKACNAFVELADACGYAVAvmpsakglvpehhphfigtYWGAVSTAFFSVGYSLLLKKekavilqpdrvviangpafGCVLMKDFLKALSKRLKSNttayenyhriyvpegqppkcepkeplrvNVLFQHIQKMLSSETAVIAETgdswfncqklklpkgcgyefqmqYGSIGwsvgatlgyaqsvpeKRVIACigdgsfqvTAQDVSTMLRCGQKTIIFLINnggytieveihdgpynviknwnYTGLVDaihngegkcwttkVFCEEELIEAIEnatgpkkdcLCFIEVLVHKDDTSKELLEWGsrvsaansrppnpq
mdtkigsldtckppcsdlASPPNGAVSTIQSSVPATPLVNPSESTLGRHLARRLVQIGATDVFSVPGDFNLTLLDHLIAEPGLNLIGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCYQAVVNNLEDAHELIDTAVSTALKESKPVYISVACNLPAIPHPTFSREPVPFSLSPKLSNEMGLEAAVEAAAEFLNKAVKPVLVAGPKMRVAKACNAFVELADACGYAVAVMPSAKGLVPEHHPHFIGTYWGAVSTAFFSVGYSLLLKKEKAVILQPDRVVIANGPAFGCVLMKDFLKALSKRLKSNTTAYENYHRIYVPEGQPPKCEPKEPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAienatgpkkdCLCFIEVLVHKDDTSKEllewgsrvsaansrppnpq
MDTKIGSLDTCKPPCSDLASPPNGAVSTIQSSVPATPLVNPSESTLGRHLARRLVQIGATDVFSVPGDFNLTLLDHLIAEPGLNLIGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCYQAVVNNLEDAHELIDTAVSTALKESKPVYISVACNLPAIPHPTFSREPVPFSLSPKLSNEMGLeaaveaaaeFLNKAVKPVLVAGPKMRVAKACNAFVELADACGYAVAVMPSAKGLVPEHHPHFIGTYWGAVSTAFFSVGYSLLLKKEKAVILQPDRVVIANGPAFGCVLMKDFLKALSKRLKSNTTAYENYHRIYVPEGQPPKCEPKEPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDDTSKELLEWGSRVSAANSRPPNPQ
**********************************************GRHLARRLVQIGATDVFSVPGDFNLTLLDHLIAEPGLNLIGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCYQAVVNNLEDAHELIDTAVSTALKESKPVYISVACNLPAIPHPTF******************LEAAVEAAAEFLNKAVKPVLVAGPKMRVAKACNAFVELADACGYAVAVMPSAKGLVPEHHPHFIGTYWGAVSTAFFSVGYSLLLKKEKAVILQPDRVVIANGPAFGCVLMKDFLKALSKRLKSNTTAYENYHRIYVP***********PLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDDTSKELLEW***************
*********************************************LGRHLARRLVQIGATDVFSVPGDFNLTLLDHLIAEPGLNLIGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCYQAVVNNLEDAHELIDTAVSTALKESKPVYISVACNLPAIPHPTFSREPV***********MGLEAAVEAAAEFLNKAVKPVLVAGPKMRVAKACNAFVELADACGYAVAVMPSAKGLVPEHHPHFIGTYWGAVSTAFFSVGYSLLLKKEKAVILQPDRVVIANGPAFGCVLMKDFLKALSKRLKSNTTAYENYHRIYV*************LRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDDTSKELLE****************
********DTCKPPCSDLASPPNGAVSTIQSSVPATPLVNPSESTLGRHLARRLVQIGATDVFSVPGDFNLTLLDHLIAEPGLNLIGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCYQAVVNNLEDAHELIDTAVSTALKESKPVYISVACNLPAIPHPTFSREPVPFSLSPKLSNEMGLEAAVEAAAEFLNKAVKPVLVAGPKMRVAKACNAFVELADACGYAVAVMPSAKGLVPEHHPHFIGTYWGAVSTAFFSVGYSLLLKKEKAVILQPDRVVIANGPAFGCVLMKDFLKALSKRLKSNTTAYENYHRIYVPEGQPPKCEPKEPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDDTSKELLEWGSRV***********
*******L*TCKPPCSDLASPP******************PSESTLGRHLARRLVQIGATDVFSVPGDFNLTLLDHLIAEPGLNLIGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCYQAVVNNLEDAHELIDTAVSTALKESKPVYISVACNLPAIPHPTFSREPVPFSLSPKLSNEMGLEAAVEAAAEFLNKAVKPVLVAGPKMRVAKACNAFVELADACGYAVAVMPSAKGLVPEHHPHFIGTYWGAVSTAFFSVGYSLLLKKEKAVILQPDRVVIANGPAFGCVLMKDFLKALSKRLKSNTTAYENYHRIYVPEGQPPKCEPKEPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDDTSKELLEWGSR************
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MDTKIGSLDTCKPPCSDLASPPNGAVSTIQSSVPATPLVNPSESTLGRHLARRLVQIGATDVFSVPGDFNLTLLDHLIAEPGLNLIGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCYQAVVNNLEDAHELIDTAVSTALKESKPVYISVACNLPAIPHPTFSREPVPFSLSPKLSNEMGLEAAVEAAAEFLNKAVKPVLVAGPKMRVAKACNAFVELADACGYAVAVMPSAKGLVPEHHPHFIGTYWGAVSTAFFSVGYSLLLKKEKAVILQPDRVVIANGPAFGCVLMKDFLKALSKRLKSNTTAYENYHRIYVPEGQPPKCEPKEPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDDTSKELLEWGSRVSAANSRPPNPQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query585 2.2.26 [Sep-21-2011]
A2XFI3606 Pyruvate decarboxylase is N/A no 0.962 0.929 0.791 0.0
Q10MW3605 Pyruvate decarboxylase is yes no 0.960 0.928 0.789 0.0
P51846614 Pyruvate decarboxylase is N/A no 0.953 0.908 0.772 0.0
A2Y5L9605 Pyruvate decarboxylase is N/A no 0.974 0.942 0.768 0.0
Q0DHF6605 Pyruvate decarboxylase is no no 0.974 0.942 0.768 0.0
P28516610 Pyruvate decarboxylase is N/A no 0.923 0.885 0.789 0.0
A2YQ76587 Pyruvate decarboxylase is N/A no 0.926 0.923 0.775 0.0
Q0D3D2587 Pyruvate decarboxylase is no no 0.926 0.923 0.773 0.0
P51850593 Pyruvate decarboxylase is N/A no 0.964 0.951 0.759 0.0
P51845418 Pyruvate decarboxylase is N/A no 0.678 0.949 0.856 0.0
>sp|A2XFI3|PDC2_ORYSI Pyruvate decarboxylase isozyme 2 OS=Oryza sativa subsp. indica GN=PDC2 PE=2 SV=2 Back     alignment and function desciption
 Score =  971 bits (2510), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 463/585 (79%), Positives = 510/585 (87%), Gaps = 22/585 (3%)

Query: 22  PNGAVSTIQSSVPATPLVNPSESTLGRHLARRLVQIGATDVFSVPGDFNLTLLDHLIAEP 81
           P  AV    +S    P V+  E++LGRHLARRLVQ+G +DVF+VPGDFNLTLLDHLIAEP
Sbjct: 23  PASAVGCPMTSARPAP-VSAGEASLGRHLARRLVQVGVSDVFAVPGDFNLTLLDHLIAEP 81

Query: 82  GLNLIGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGG 141
           GL L+GCCNELNAGYAADGYAR+RGVGAC VTFTVGGLSVLNAIAGAYSENLP+ICI GG
Sbjct: 82  GLRLVGCCNELNAGYAADGYARARGVGACAVTFTVGGLSVLNAIAGAYSENLPVICIAGG 141

Query: 142 PNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCYQAVVNNLEDAHELIDTAVSTALKESK 201
           PNSNDYGTNRILHHTIGLPDFSQELRCFQTVTC+QAVV NLEDAHE IDTA++TAL+ESK
Sbjct: 142 PNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCHQAVVTNLEDAHEQIDTAIATALRESK 201

Query: 202 PVYISVACNLPAIPHPTFSREPVPFSLSPKLSNEMGLEAAVEAAAEFLNKAVKPVLVAGP 261
           PVY+S++CNLP +PHPTFSR+PVPF L+P+LSN+MGLEAAVEA  EFLNKAVKPVLV GP
Sbjct: 202 PVYLSISCNLPGLPHPTFSRDPVPFFLAPRLSNKMGLEAAVEATVEFLNKAVKPVLVGGP 261

Query: 262 KMRVAKACNAFVELADACGYAVAVMPSAKGLVPEHHPHFIGTYWGAVSTAF--------- 312
           K+RVAKA  AFV+L DA GYA AVMPSAKGLVPE HPHFIGTYWGAVSTAF         
Sbjct: 262 KLRVAKAGKAFVDLVDASGYAYAVMPSAKGLVPETHPHFIGTYWGAVSTAFCAEIVESAD 321

Query: 313 ------------FSVGYSLLLKKEKAVILQPDRVVIANGPAFGCVLMKDFLKALSKRLKS 360
                        SVGYS LLKK+KA+I+QP+RV++ NGPAFGCV+MK+FL  L+KR+  
Sbjct: 322 AYLFAGPIFNDYSSVGYSFLLKKDKAIIVQPERVIVGNGPAFGCVMMKEFLSELAKRVNK 381

Query: 361 NTTAYENYHRIYVPEGQPPKCEPKEPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKL 420
           NTTAYENY RI+VPEGQP + EP EPLRVNVLF+H+QKML+S++AVIAETGDSWFNCQKL
Sbjct: 382 NTTAYENYKRIFVPEGQPLESEPNEPLRVNVLFKHVQKMLNSDSAVIAETGDSWFNCQKL 441

Query: 421 KLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQ 480
           KLP+GCGYEFQMQYGSIGWSVGA LGYAQ   +KRVIACIGDGSFQVTAQDVSTM+RC Q
Sbjct: 442 KLPEGCGYEFQMQYGSIGWSVGALLGYAQGAKDKRVIACIGDGSFQVTAQDVSTMIRCAQ 501

Query: 481 KTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAI 540
            +IIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWT+KV CEEEL EAI
Sbjct: 502 NSIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTSKVKCEEELTEAI 561

Query: 541 ENATGPKKDCLCFIEVLVHKDDTSKELLEWGSRVSAANSRPPNPQ 585
             A G KKDCLCFIEV+ HKDDTSKELLEWGSRVSAANSRPPNPQ
Sbjct: 562 GMALGEKKDCLCFIEVIAHKDDTSKELLEWGSRVSAANSRPPNPQ 606

Oryza sativa subsp. indica (taxid: 39946)
EC: 4EC: .EC: 1EC: .EC: 1EC: .EC: 1
>sp|Q10MW3|PDC2_ORYSJ Pyruvate decarboxylase isozyme 2 OS=Oryza sativa subsp. japonica GN=PDC2 PE=2 SV=1 Back     alignment and function description
>sp|P51846|PDC2_TOBAC Pyruvate decarboxylase isozyme 2 OS=Nicotiana tabacum GN=PDC2 PE=2 SV=1 Back     alignment and function description
>sp|A2Y5L9|PDC1_ORYSI Pyruvate decarboxylase isozyme 1 OS=Oryza sativa subsp. indica GN=PDC1 PE=2 SV=1 Back     alignment and function description
>sp|Q0DHF6|PDC1_ORYSJ Pyruvate decarboxylase isozyme 1 OS=Oryza sativa subsp. japonica GN=PDC1 PE=2 SV=1 Back     alignment and function description
>sp|P28516|PDC1_MAIZE Pyruvate decarboxylase isozyme 1 OS=Zea mays GN=PDC1 PE=2 SV=1 Back     alignment and function description
>sp|A2YQ76|PDC3_ORYSI Pyruvate decarboxylase isozyme 3 OS=Oryza sativa subsp. indica GN=PDC3 PE=2 SV=2 Back     alignment and function description
>sp|Q0D3D2|PDC3_ORYSJ Pyruvate decarboxylase isozyme 3 OS=Oryza sativa subsp. japonica GN=PDC3 PE=2 SV=1 Back     alignment and function description
>sp|P51850|PDC1_PEA Pyruvate decarboxylase isozyme 1 OS=Pisum sativum GN=PDC1 PE=2 SV=1 Back     alignment and function description
>sp|P51845|PDC1_TOBAC Pyruvate decarboxylase isozyme 1 (Fragment) OS=Nicotiana tabacum GN=PDC1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query585
29373077606 pyruvate decarboxylase 1 [Lotus cornicul 0.998 0.963 0.843 0.0
449439854605 PREDICTED: pyruvate decarboxylase isozym 0.998 0.965 0.856 0.0
449483536605 PREDICTED: pyruvate decarboxylase isozym 0.998 0.965 0.854 0.0
224139168605 predicted protein [Populus trichocarpa] 0.998 0.965 0.858 0.0
255579310607 pyruvate decarboxylase, putative [Ricinu 1.0 0.963 0.856 0.0
33149681605 pyruvate decarboxylase [Dianthus caryoph 0.998 0.965 0.848 0.0
356521044607 PREDICTED: pyruvate decarboxylase isozym 0.998 0.962 0.847 0.0
297798642607 hypothetical protein ARALYDRAFT_491381 [ 1.0 0.963 0.822 0.0
15234062607 pyruvate decarboxylase [Arabidopsis thal 1.0 0.963 0.818 0.0
224087780605 predicted protein [Populus trichocarpa] 0.998 0.965 0.841 0.0
>gi|29373077|gb|AAO72533.1| pyruvate decarboxylase 1 [Lotus corniculatus] Back     alignment and taxonomy information
 Score = 1060 bits (2740), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 512/607 (84%), Positives = 546/607 (89%), Gaps = 23/607 (3%)

Query: 1   MDTKIGSLDTCKPPCSDLASPPNGAVST-IQSSVPATPLVNPSESTLGRHLARRLVQIGA 59
           MD K+GSLDT KP  +D+ S      +T IQSS+P+T  V+  ++TLGRHLARRL QIG 
Sbjct: 1   MDVKLGSLDTTKPASNDVVSCATANHTTAIQSSIPSTA-VSSCDATLGRHLARRLAQIGV 59

Query: 60  TDVFSVPGDFNLTLLDHLIAEPGLNLIGCCNELNAGYAADGYARSRGVGACVVTFTVGGL 119
           TDVFSVPGDFNLTLLDHLIAEP LNL+GCCNELNAGYAADGYAR+RGVGACVVTFTVGGL
Sbjct: 60  TDVFSVPGDFNLTLLDHLIAEPQLNLVGCCNELNAGYAADGYARARGVGACVVTFTVGGL 119

Query: 120 SVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCYQAVV 179
           SVLNAIAGAYSENLPLICIVGGPNSNDYGT+RILHHTIGLPDF+QELRCFQTVTC+QAVV
Sbjct: 120 SVLNAIAGAYSENLPLICIVGGPNSNDYGTSRILHHTIGLPDFTQELRCFQTVTCFQAVV 179

Query: 180 NNLEDAHELIDTAVSTALKESKPVYISVACNLPAIPHPTFSREPVPFSLSPKLSNEMGLE 239
           NNLEDAHE IDTA+STALKESKPVYIS+ CNLP IPHPTFSR+PVPFSLS KLSN+MGLE
Sbjct: 180 NNLEDAHEQIDTAISTALKESKPVYISIGCNLPGIPHPTFSRDPVPFSLSAKLSNQMGLE 239

Query: 240 AAVEAAAEFLNKAVKPVLVAGPKMRVAKACNAFVELADACGYAVAVMPSAKGLVPEHHPH 299
           AAVEA AEFLNKAVKPVLV GPK+RVAKA +AFVELADA GYA+AVMPSAKG VPEHHPH
Sbjct: 240 AAVEATAEFLNKAVKPVLVGGPKLRVAKASDAFVELADASGYALAVMPSAKGQVPEHHPH 299

Query: 300 FIGTYWGAVSTAF---------------------FSVGYSLLLKKEKAVILQPDRVVIAN 338
           FIGTYWGAVSTAF                      SVGYSLLLKKEKA+I+QPDRVVIAN
Sbjct: 300 FIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYSSVGYSLLLKKEKAIIVQPDRVVIAN 359

Query: 339 GPAFGCVLMKDFLKALSKRLKSNTTAYENYHRIYVPEGQPPKCEPKEPLRVNVLFQHIQK 398
           GPAFGCVLMKDFLKAL+KRLK N  AYENYHRI+VPEG+P K  PKEPLRVNV+FQHIQK
Sbjct: 360 GPAFGCVLMKDFLKALAKRLKHNNAAYENYHRIFVPEGKPLKSAPKEPLRVNVMFQHIQK 419

Query: 399 MLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIA 458
           MLS ETAVIAETGDSWFNCQKLKLP+GCGYEFQMQYGSIGWSVGATLGYAQ+VPEKRVIA
Sbjct: 420 MLSGETAVIAETGDSWFNCQKLKLPRGCGYEFQMQYGSIGWSVGATLGYAQAVPEKRVIA 479

Query: 459 CIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAI 518
           CIGDGSFQVTAQDVSTMLRCGQ TIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGL++AI
Sbjct: 480 CIGDGSFQVTAQDVSTMLRCGQNTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLIEAI 539

Query: 519 HNGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDDTSKELLEWGSRVSAAN 578
           HNGEGKCWT+KVFCEEEL+EAI  ATGPKKDCLCFIEV+VHKDDTSKELLEWGSRVSAAN
Sbjct: 540 HNGEGKCWTSKVFCEEELVEAIATATGPKKDCLCFIEVIVHKDDTSKELLEWGSRVSAAN 599

Query: 579 SRPPNPQ 585
            RPPNPQ
Sbjct: 600 GRPPNPQ 606

Source: Lotus corniculatus

Species: Lotus corniculatus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|449439854|ref|XP_004137700.1| PREDICTED: pyruvate decarboxylase isozyme 2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449483536|ref|XP_004156618.1| PREDICTED: pyruvate decarboxylase isozyme 2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224139168|ref|XP_002322997.1| predicted protein [Populus trichocarpa] gi|222867627|gb|EEF04758.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255579310|ref|XP_002530500.1| pyruvate decarboxylase, putative [Ricinus communis] gi|223529957|gb|EEF31884.1| pyruvate decarboxylase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|33149681|gb|AAP96920.1| pyruvate decarboxylase [Dianthus caryophyllus] Back     alignment and taxonomy information
>gi|356521044|ref|XP_003529168.1| PREDICTED: pyruvate decarboxylase isozyme 2-like [Glycine max] Back     alignment and taxonomy information
>gi|297798642|ref|XP_002867205.1| hypothetical protein ARALYDRAFT_491381 [Arabidopsis lyrata subsp. lyrata] gi|297313041|gb|EFH43464.1| hypothetical protein ARALYDRAFT_491381 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15234062|ref|NP_195033.1| pyruvate decarboxylase [Arabidopsis thaliana] gi|3688188|emb|CAA21216.1| pyruvate decarboxylase-1 (Pdc1) [Arabidopsis thaliana] gi|7270254|emb|CAB80024.1| pyruvate decarboxylase-1 (Pdc1) [Arabidopsis thaliana] gi|17979051|gb|AAL49793.1| putative pyruvate decarboxylase-1 Pdc1 [Arabidopsis thaliana] gi|21689675|gb|AAM67459.1| putative pyruvate decarboxylase-1 Pdc1 [Arabidopsis thaliana] gi|332660769|gb|AEE86169.1| pyruvate decarboxylase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|224087780|ref|XP_002308230.1| predicted protein [Populus trichocarpa] gi|222854206|gb|EEE91753.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query585
TAIR|locus:2123827607 AT4G33070 [Arabidopsis thalian 0.536 0.517 0.822 7.6e-273
TAIR|locus:2179132603 AT5G01320 [Arabidopsis thalian 0.531 0.515 0.802 1.5e-267
TAIR|locus:2160170607 PDC2 "pyruvate decarboxylase-2 0.533 0.514 0.805 1.9e-267
TAIR|locus:2179147592 PDC3 "pyruvate decarboxylase-3 0.478 0.472 0.825 8.4e-254
POMBASE|SPAC186.09572 SPAC186.09 "pyruvate decarboxy 0.464 0.475 0.438 2.3e-116
POMBASE|SPAC1F8.07c569 SPAC1F8.07c "pyruvate decarbox 0.458 0.471 0.444 3.3e-115
TIGR_CMR|BA_2486561 BA_2486 "indolepyruvate decarb 0.454 0.474 0.360 9.7e-74
SGD|S000004124563 PDC5 "Minor isoform of pyruvat 0.456 0.474 0.354 5.7e-68
UNIPROTKB|O53865560 kdc "Alpha-keto-acid decarboxy 0.441 0.460 0.382 1.1e-66
SGD|S000003319563 PDC6 "Minor isoform of pyruvat 0.449 0.467 0.330 3.5e-64
TAIR|locus:2123827 AT4G33070 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1372 (488.0 bits), Expect = 7.6e-273, Sum P(2) = 7.6e-273
 Identities = 259/315 (82%), Positives = 282/315 (89%)

Query:     1 MDTKIGSLDTCKPPCSDLASPPNGAVSTIQSSVPATPL-VNPSESTLGRHLARRLVQIGA 59
             MDTKIGS+D CKP   D+ SP NG V+TI +SVP++ + +N  ++TLGRHLARRLVQ G 
Sbjct:     1 MDTKIGSIDDCKPTNGDVCSPTNGTVATIHNSVPSSAITINYCDATLGRHLARRLVQAGV 60

Query:    60 TDVFSVPGDFNLTLLDHLIAEPGLNLIGCCNELNAGYAADGYARSRGVGACVVTFTVGGL 119
             TDVFSVPGDFNLTLLDHL+AEP LNLIGCCNELNAGYAADGYARSRGVGACVVTFTVGGL
Sbjct:    61 TDVFSVPGDFNLTLLDHLMAEPDLNLIGCCNELNAGYAADGYARSRGVGACVVTFTVGGL 120

Query:   120 SVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCYQAVV 179
             SVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCYQAVV
Sbjct:   121 SVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCYQAVV 180

Query:   180 NNLEDAHELIDTAVSTALKESKPVYISVACNLPAIPHPTFSREPVPFSLSPKLSNEMGLX 239
             NNL+DAHE ID A+STALKESKPVYISV+CNL AIPH TFSR+PVPFSL+P+LSN+MGL 
Sbjct:   181 NNLDDAHEQIDKAISTALKESKPVYISVSCNLAAIPHHTFSRDPVPFSLAPRLSNKMGLE 240

Query:   240 XXXXXXXXFLNKAVKPVLVAGPKMRVAKACNAFVELADACGYAVAVMPSAKGLVPEHHPH 299
                     FLNKAVKPV+V GPK+RVAKAC+AFVELADA GYA+A+MPSAKG VPEHHPH
Sbjct:   241 AAVEATLEFLNKAVKPVMVGGPKLRVAKACDAFVELADASGYALAMMPSAKGFVPEHHPH 300

Query:   300 FIGTYWGAVSTAFFS 314
             FIGTYWGAVST F S
Sbjct:   301 FIGTYWGAVSTPFCS 315
GO:0000287 "magnesium ion binding" evidence=IEA
GO:0003824 "catalytic activity" evidence=IEA
GO:0004737 "pyruvate decarboxylase activity" evidence=ISS
GO:0009507 "chloroplast" evidence=ISM
GO:0016740 "transferase activity" evidence=IEA
GO:0016831 "carboxy-lyase activity" evidence=IEA
GO:0030976 "thiamine pyrophosphate binding" evidence=IEA
GO:0016020 "membrane" evidence=IDA
GO:0005829 "cytosol" evidence=IDA
GO:0001666 "response to hypoxia" evidence=RCA
GO:0006094 "gluconeogenesis" evidence=RCA
GO:0007010 "cytoskeleton organization" evidence=RCA
GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA
GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA
GO:0010498 "proteasomal protein catabolic process" evidence=RCA
TAIR|locus:2179132 AT5G01320 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2160170 PDC2 "pyruvate decarboxylase-2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2179147 PDC3 "pyruvate decarboxylase-3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
POMBASE|SPAC186.09 SPAC186.09 "pyruvate decarboxylase (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
POMBASE|SPAC1F8.07c SPAC1F8.07c "pyruvate decarboxylase (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
TIGR_CMR|BA_2486 BA_2486 "indolepyruvate decarboxylase, putative" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
SGD|S000004124 PDC5 "Minor isoform of pyruvate decarboxylase" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
UNIPROTKB|O53865 kdc "Alpha-keto-acid decarboxylase" [Mycobacterium tuberculosis (taxid:1773)] Back     alignment and assigned GO terms
SGD|S000003319 PDC6 "Minor isoform of pyruvate decarboxylase" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9CBD6KDC_MYCLE4, ., 1, ., 1, ., -0.31810.85290.8769yesno
A0QBE6KDC_MYCA14, ., 1, ., 1, ., -0.30050.86830.9023yesno
P06672PDC_ZYMMO4, ., 1, ., 1, ., 10.41920.90250.9295yesno
P87208PDC_EMENI4, ., 1, ., 1, ., 10.32120.87690.9031yesno
Q0D3D2PDC3_ORYSJ4, ., 1, ., 1, ., 10.77380.92640.9233nono
Q6FJA3PDC1_CANGA4, ., 1, ., 1, ., 10.33450.90940.9432yesno
P51845PDC1_TOBAC4, ., 1, ., 1, ., 10.85640.67860.9497N/Ano
P51846PDC2_TOBAC4, ., 1, ., 1, ., 10.77220.95380.9087N/Ano
O53865KDC_MYCTU4, ., 1, ., 1, ., -0.31310.85290.8910yesno
Q7U140KDC_MYCBO4, ., 1, ., 1, ., -0.31310.85290.8910yesno
Q10MW3PDC2_ORYSJ4, ., 1, ., 1, ., 10.78970.96060.9289yesno
A2XFI3PDC2_ORYSI4, ., 1, ., 1, ., 10.79140.96230.9290N/Ano
A1KGY5KDC_MYCBP4, ., 1, ., 1, ., -0.31310.85290.8910yesno
Q0DHF6PDC1_ORYSJ4, ., 1, ., 1, ., 10.76800.97430.9421nono
P16467PDC5_YEAST4, ., 1, ., 1, ., 10.33450.90420.9396yesno
A2Y5L9PDC1_ORYSI4, ., 1, ., 1, ., 10.76800.97430.9421N/Ano
Q12629PDC1_KLULA4, ., 1, ., 1, ., 10.32860.90760.9431yesno
P23234DCIP_ENTCL4, ., 1, ., 1, ., 7, 40.30790.85470.9057yesno
P28516PDC1_MAIZE4, ., 1, ., 1, ., 10.78960.92300.8852N/Ano
Q9P7P6PDC3_SCHPO4, ., 1, ., 1, ., 10.42370.90760.9283yesno
P51851PDC2_PEA4, ., 1, ., 1, ., 10.85920.65640.9481N/Ano
P51850PDC1_PEA4, ., 1, ., 1, ., 10.75930.96410.9510N/Ano
A5U0P1KDC_MYCTA4, ., 1, ., 1, ., -0.31310.85290.8910yesno
A2YQ76PDC3_ORYSI4, ., 1, ., 1, ., 10.77560.92640.9233N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer4.1.1.10.979
3rd Layer4.1.10.983

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query585
PLN02573578 PLN02573, PLN02573, pyruvate decarboxylase 0.0
COG3961557 COG3961, COG3961, Pyruvate decarboxylase and relat 0.0
TIGR03393539 TIGR03393, indolpyr_decarb, indolepyruvate decarbo 2e-96
cd07038162 cd07038, TPP_PYR_PDC_IPDC_like, Pyrimidine (PYR) b 2e-87
cd02005183 cd02005, TPP_PDC_IPDC, Thiamine pyrophosphate (TPP 2e-85
COG0028550 COG0028, IlvB, Thiamine pyrophosphate-requiring en 4e-57
pfam02776172 pfam02776, TPP_enzyme_N, Thiamine pyrophosphate en 9e-39
TIGR03394535 TIGR03394, indol_phenyl_DC, indolepyruvate/phenylp 2e-37
cd06586154 cd06586, TPP_enzyme_PYR, Pyrimidine (PYR) binding 2e-30
cd07035155 cd07035, TPP_PYR_POX_like, Pyrimidine (PYR) bindin 1e-29
TIGR00118558 TIGR00118, acolac_lg, acetolactate synthase, large 1e-20
TIGR03457579 TIGR03457, sulphoacet_xsc, sulfoacetaldehyde acety 2e-20
PRK08266542 PRK08266, PRK08266, hypothetical protein; Provisio 2e-19
PRK06154565 PRK06154, PRK06154, hypothetical protein; Provisio 5e-17
PRK07525588 PRK07525, PRK07525, sulfoacetaldehyde acetyltransf 1e-16
cd00568168 cd00568, TPP_enzymes, Thiamine pyrophosphate (TPP) 2e-16
cd07039164 cd07039, TPP_PYR_POX, Pyrimidine (PYR) binding dom 6e-16
pfam00205136 pfam00205, TPP_enzyme_M, Thiamine pyrophosphate en 6e-15
PRK08611576 PRK08611, PRK08611, pyruvate oxidase; Provisional 8e-15
PRK07524535 PRK07524, PRK07524, hypothetical protein; Provisio 5e-14
PRK07282566 PRK07282, PRK07282, acetolactate synthase catalyti 2e-13
PRK07092530 PRK07092, PRK07092, benzoylformate decarboxylase; 1e-12
PRK07064544 PRK07064, PRK07064, hypothetical protein; Provisio 1e-12
PRK08322547 PRK08322, PRK08322, acetolactate synthase; Reviewe 2e-12
PRK06456572 PRK06456, PRK06456, acetolactate synthase catalyti 3e-12
PRK08978548 PRK08978, PRK08978, acetolactate synthase 2 cataly 4e-12
PRK06276586 PRK06276, PRK06276, acetolactate synthase catalyti 2e-11
PRK08155564 PRK08155, PRK08155, acetolactate synthase catalyti 2e-11
PRK05858542 PRK05858, PRK05858, hypothetical protein; Provisio 3e-11
pfam02775151 pfam02775, TPP_enzyme_C, Thiamine pyrophosphate en 5e-11
COG3962617 COG3962, COG3962, Acetolactate synthase [Amino aci 1e-10
PRK08979572 PRK08979, PRK08979, acetolactate synthase 3 cataly 2e-10
cd02004172 cd02004, TPP_BZL_OCoD_HPCL, Thiamine pyrophosphate 2e-10
TIGR01504588 TIGR01504, glyox_carbo_lig, glyoxylate carboligase 2e-10
PRK06725570 PRK06725, PRK06725, acetolactate synthase 3 cataly 2e-10
PRK08527563 PRK08527, PRK08527, acetolactate synthase 3 cataly 2e-10
PRK08327569 PRK08327, PRK08327, acetolactate synthase catalyti 7e-10
PRK06965587 PRK06965, PRK06965, acetolactate synthase 3 cataly 9e-10
cd02002178 cd02002, TPP_BFDC, Thiamine pyrophosphate (TPP) fa 1e-09
PRK08199557 PRK08199, PRK08199, thiamine pyrophosphate protein 5e-09
PRK07789612 PRK07789, PRK07789, acetolactate synthase 1 cataly 6e-09
PRK06882574 PRK06882, PRK06882, acetolactate synthase 3 cataly 9e-09
COG3960592 COG3960, COG3960, Glyoxylate carboligase [General 1e-08
PRK06048561 PRK06048, PRK06048, acetolactate synthase 3 cataly 2e-08
TIGR02418539 TIGR02418, acolac_catab, acetolactate synthase, ca 3e-08
PRK09107595 PRK09107, PRK09107, acetolactate synthase 3 cataly 4e-08
PRK06112578 PRK06112, PRK06112, acetolactate synthase catalyti 4e-08
PRK06466574 PRK06466, PRK06466, acetolactate synthase 3 cataly 1e-07
PRK08273597 PRK08273, PRK08273, thiamine pyrophosphate protein 2e-07
TIGR00173430 TIGR00173, menD, 2-succinyl-5-enolpyruvyl-6-hydrox 5e-07
cd02003205 cd02003, TPP_IolD, Thiamine pyrophosphate (TPP) fa 5e-07
PRK06457549 PRK06457, PRK06457, pyruvate dehydrogenase; Provis 8e-07
PRK07979574 PRK07979, PRK07979, acetolactate synthase 3 cataly 1e-06
CHL00099585 CHL00099, ilvB, acetohydroxyacid synthase large su 1e-06
cd02015186 cd02015, TPP_AHAS, Thiamine pyrophosphate (TPP) fa 5e-06
cd02010177 cd02010, TPP_ALS, Thiamine pyrophosphate (TPP) fam 6e-06
TIGR03254554 TIGR03254, oxalate_oxc, oxalyl-CoA decarboxylase 8e-06
PRK06112578 PRK06112, PRK06112, acetolactate synthase catalyti 1e-05
cd02014178 cd02014, TPP_POX, Thiamine pyrophosphate (TPP) fam 2e-05
PRK08199557 PRK08199, PRK08199, thiamine pyrophosphate protein 3e-05
PRK06048561 PRK06048, PRK06048, acetolactate synthase 3 cataly 5e-05
PLN02470585 PLN02470, PLN02470, acetolactate synthase 5e-05
PRK07524535 PRK07524, PRK07524, hypothetical protein; Provisio 7e-05
PRK07586514 PRK07586, PRK07586, hypothetical protein; Validate 7e-05
PRK08617552 PRK08617, PRK08617, acetolactate synthase; Reviewe 9e-05
cd02006202 cd02006, TPP_Gcl, Thiamine pyrophosphate (TPP) fam 1e-04
PRK07418616 PRK07418, PRK07418, acetolactate synthase 3 cataly 1e-04
TIGR02720575 TIGR02720, pyruv_oxi_spxB, pyruvate oxidase 1e-04
PRK06163202 PRK06163, PRK06163, hypothetical protein; Provisio 2e-04
PRK08266542 PRK08266, PRK08266, hypothetical protein; Provisio 5e-04
PRK07979574 PRK07979, PRK07979, acetolactate synthase 3 cataly 5e-04
PRK11269591 PRK11269, PRK11269, glyoxylate carboligase; Provis 5e-04
cd07037162 cd07037, TPP_PYR_MenD, Pyrimidine (PYR) binding do 7e-04
PRK07789612 PRK07789, PRK07789, acetolactate synthase 1 cataly 0.001
PRK06882574 PRK06882, PRK06882, acetolactate synthase 3 cataly 0.002
>gnl|CDD|215311 PLN02573, PLN02573, pyruvate decarboxylase Back     alignment and domain information 
 Score = 1250 bits (3236), Expect = 0.0
 Identities = 494/576 (85%), Positives = 523/576 (90%), Gaps = 21/576 (3%)

Query: 31  SSVPATPLVNPSESTLGRHLARRLVQIGATDVFSVPGDFNLTLLDHLIAEPGLNLIGCCN 90
           S+      V+ S++TLGRHLARRLV+IG TDVFSVPGDFNLTLLDHLIAEPGLNLIGCCN
Sbjct: 3   SAPKPATPVSSSDATLGRHLARRLVEIGVTDVFSVPGDFNLTLLDHLIAEPGLNLIGCCN 62

Query: 91  ELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTN 150
           ELNAGYAADGYAR+RGVGACVVTFTVGGLSVLNAIAGAYSENLP+ICIVGGPNSNDYGTN
Sbjct: 63  ELNAGYAADGYARARGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTN 122

Query: 151 RILHHTIGLPDFSQELRCFQTVTCYQAVVNNLEDAHELIDTAVSTALKESKPVYISVACN 210
           RILHHTIGLPDFSQELRCFQTVTCYQAV+NNLEDAHELIDTA+STALKESKPVYISV+CN
Sbjct: 123 RILHHTIGLPDFSQELRCFQTVTCYQAVINNLEDAHELIDTAISTALKESKPVYISVSCN 182

Query: 211 LPAIPHPTFSREPVPFSLSPKLSNEMGLEAAVEAAAEFLNKAVKPVLVAGPKMRVAKACN 270
           L AIPHPTFSREPVPF L+P+LSN+M LEAAVEAAAEFLNKAVKPVLV GPK+RVAKAC 
Sbjct: 183 LAAIPHPTFSREPVPFFLTPRLSNKMSLEAAVEAAAEFLNKAVKPVLVGGPKLRVAKACK 242

Query: 271 AFVELADACGYAVAVMPSAKGLVPEHHPHFIGTYWGAVSTAFF----------------- 313
           AFVELADA GY VAVMPSAKGLVPEHHPHFIGTYWGAVST F                  
Sbjct: 243 AFVELADASGYPVAVMPSAKGLVPEHHPHFIGTYWGAVSTPFCAEIVESADAYLFAGPIF 302

Query: 314 ----SVGYSLLLKKEKAVILQPDRVVIANGPAFGCVLMKDFLKALSKRLKSNTTAYENYH 369
               SVGYSLLLKKEKA+I+QPDRV I NGPAFGCVLMKDFL+AL+KR+K NTTAYENY 
Sbjct: 303 NDYSSVGYSLLLKKEKAIIVQPDRVTIGNGPAFGCVLMKDFLEALAKRVKKNTTAYENYK 362

Query: 370 RIYVPEGQPPKCEPKEPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYE 429
           RI+VPEG+P K EP EPLRVNVLF+HIQKMLS +TAVIAETGDSWFNCQKLKLP+GCGYE
Sbjct: 363 RIFVPEGEPLKSEPGEPLRVNVLFKHIQKMLSGDTAVIAETGDSWFNCQKLKLPEGCGYE 422

Query: 430 FQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINN 489
           FQMQYGSIGWSVGATLGYAQ+ P+KRVIACIGDGSFQVTAQDVSTM+RCGQK+IIFLINN
Sbjct: 423 FQMQYGSIGWSVGATLGYAQAAPDKRVIACIGDGSFQVTAQDVSTMIRCGQKSIIFLINN 482

Query: 490 GGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKD 549
           GGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWT KV  EEELIEAI  ATG KKD
Sbjct: 483 GGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTAKVRTEEELIEAIATATGEKKD 542

Query: 550 CLCFIEVLVHKDDTSKELLEWGSRVSAANSRPPNPQ 585
           CLCFIEV+VHKDDTSKELLEWGSRVSAANSRPPNPQ
Sbjct: 543 CLCFIEVIVHKDDTSKELLEWGSRVSAANSRPPNPQ 578

Length = 578
>gnl|CDD|226470 COG3961, COG3961, Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes [Carbohydrate transport and metabolism / Coenzyme metabolism / General function prediction only] Back     alignment and domain information
>gnl|CDD|132434 TIGR03393, indolpyr_decarb, indolepyruvate decarboxylase, Erwinia family Back     alignment and domain information
>gnl|CDD|132921 cd07038, TPP_PYR_PDC_IPDC_like, Pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC), indolepyruvate decarboxylase (IPDC) and related proteins Back     alignment and domain information
>gnl|CDD|238963 cd02005, TPP_PDC_IPDC, Thiamine pyrophosphate (TPP) family, PDC_IPDC subfamily, TPP-binding module; composed of proteins similar to pyruvate decarboxylase (PDC) and indolepyruvate decarboxylase (IPDC) Back     alignment and domain information
>gnl|CDD|223107 COG0028, IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|217224 pfam02776, TPP_enzyme_N, Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Back     alignment and domain information
>gnl|CDD|132435 TIGR03394, indol_phenyl_DC, indolepyruvate/phenylpyruvate decarboxylase, Azospirillum family Back     alignment and domain information
>gnl|CDD|132915 cd06586, TPP_enzyme_PYR, Pyrimidine (PYR) binding domain of thiamine pyrophosphate (TPP)-dependent enzymes Back     alignment and domain information
>gnl|CDD|132918 cd07035, TPP_PYR_POX_like, Pyrimidine (PYR) binding domain of POX and related proteins Back     alignment and domain information
>gnl|CDD|232833 TIGR00118, acolac_lg, acetolactate synthase, large subunit, biosynthetic type Back     alignment and domain information
>gnl|CDD|132497 TIGR03457, sulphoacet_xsc, sulfoacetaldehyde acetyltransferase Back     alignment and domain information
>gnl|CDD|181337 PRK08266, PRK08266, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|235718 PRK06154, PRK06154, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|236042 PRK07525, PRK07525, sulfoacetaldehyde acetyltransferase; Validated Back     alignment and domain information
>gnl|CDD|238318 cd00568, TPP_enzymes, Thiamine pyrophosphate (TPP) enzyme family, TPP-binding module; found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor Back     alignment and domain information
>gnl|CDD|132922 cd07039, TPP_PYR_POX, Pyrimidine (PYR) binding domain of POX Back     alignment and domain information
>gnl|CDD|215786 pfam00205, TPP_enzyme_M, Thiamine pyrophosphate enzyme, central domain Back     alignment and domain information
>gnl|CDD|181502 PRK08611, PRK08611, pyruvate oxidase; Provisional Back     alignment and domain information
>gnl|CDD|236041 PRK07524, PRK07524, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|180919 PRK07282, PRK07282, acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>gnl|CDD|235931 PRK07092, PRK07092, benzoylformate decarboxylase; Reviewed Back     alignment and domain information
>gnl|CDD|180820 PRK07064, PRK07064, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|236239 PRK08322, PRK08322, acetolactate synthase; Reviewed Back     alignment and domain information
>gnl|CDD|180569 PRK06456, PRK06456, acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>gnl|CDD|181601 PRK08978, PRK08978, acetolactate synthase 2 catalytic subunit; Reviewed Back     alignment and domain information
>gnl|CDD|235766 PRK06276, PRK06276, acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>gnl|CDD|181257 PRK08155, PRK08155, acetolactate synthase catalytic subunit; Validated Back     alignment and domain information
>gnl|CDD|235629 PRK05858, PRK05858, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|217223 pfam02775, TPP_enzyme_C, Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Back     alignment and domain information
>gnl|CDD|226471 COG3962, COG3962, Acetolactate synthase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|181602 PRK08979, PRK08979, acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>gnl|CDD|238962 cd02004, TPP_BZL_OCoD_HPCL, Thiamine pyrophosphate (TPP) family, BZL_OCoD_HPCL subfamily, TPP-binding module; composed of proteins similar to benzaldehyde lyase (BZL), oxalyl-CoA decarboxylase (OCoD) and 2-hydroxyphytanoyl-CoA lyase (2-HPCL) Back     alignment and domain information
>gnl|CDD|213633 TIGR01504, glyox_carbo_lig, glyoxylate carboligase Back     alignment and domain information
>gnl|CDD|180672 PRK06725, PRK06725, acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>gnl|CDD|181458 PRK08527, PRK08527, acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>gnl|CDD|236243 PRK08327, PRK08327, acetolactate synthase catalytic subunit; Validated Back     alignment and domain information
>gnl|CDD|180780 PRK06965, PRK06965, acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>gnl|CDD|238960 cd02002, TPP_BFDC, Thiamine pyrophosphate (TPP) family, BFDC subfamily, TPP-binding module; composed of proteins similar to Pseudomonas putida benzoylformate decarboxylase (BFDC) Back     alignment and domain information
>gnl|CDD|181285 PRK08199, PRK08199, thiamine pyrophosphate protein; Validated Back     alignment and domain information
>gnl|CDD|236098 PRK07789, PRK07789, acetolactate synthase 1 catalytic subunit; Validated Back     alignment and domain information
>gnl|CDD|168717 PRK06882, PRK06882, acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>gnl|CDD|226469 COG3960, COG3960, Glyoxylate carboligase [General function prediction only] Back     alignment and domain information
>gnl|CDD|180368 PRK06048, PRK06048, acetolactate synthase 3 catalytic subunit; Reviewed Back     alignment and domain information
>gnl|CDD|131471 TIGR02418, acolac_catab, acetolactate synthase, catabolic Back     alignment and domain information
>gnl|CDD|236380 PRK09107, PRK09107, acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>gnl|CDD|235700 PRK06112, PRK06112, acetolactate synthase catalytic subunit; Validated Back     alignment and domain information
>gnl|CDD|180578 PRK06466, PRK06466, acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>gnl|CDD|181344 PRK08273, PRK08273, thiamine pyrophosphate protein; Provisional Back     alignment and domain information
>gnl|CDD|232855 TIGR00173, menD, 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylic-acid synthase Back     alignment and domain information
>gnl|CDD|238961 cd02003, TPP_IolD, Thiamine pyrophosphate (TPP) family, IolD subfamily, TPP-binding module; composed of proteins similar to Rhizobium leguminosarum bv Back     alignment and domain information
>gnl|CDD|180570 PRK06457, PRK06457, pyruvate dehydrogenase; Provisional Back     alignment and domain information
>gnl|CDD|181185 PRK07979, PRK07979, acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>gnl|CDD|214363 CHL00099, ilvB, acetohydroxyacid synthase large subunit Back     alignment and domain information
>gnl|CDD|238973 cd02015, TPP_AHAS, Thiamine pyrophosphate (TPP) family, Acetohydroxyacid synthase (AHAS) subfamily, TPP-binding module; composed of proteins similar to the large catalytic subunit of AHAS Back     alignment and domain information
>gnl|CDD|238968 cd02010, TPP_ALS, Thiamine pyrophosphate (TPP) family, Acetolactate synthase (ALS) subfamily, TPP-binding module; composed of proteins similar to Klebsiella pneumoniae ALS, a catabolic enzyme required for butanediol fermentation Back     alignment and domain information
>gnl|CDD|132298 TIGR03254, oxalate_oxc, oxalyl-CoA decarboxylase Back     alignment and domain information
>gnl|CDD|235700 PRK06112, PRK06112, acetolactate synthase catalytic subunit; Validated Back     alignment and domain information
>gnl|CDD|238972 cd02014, TPP_POX, Thiamine pyrophosphate (TPP) family, Pyruvate oxidase (POX) subfamily, TPP-binding module; composed of proteins similar to Lactobacillus plantarum POX, which plays a key role in controlling acetate production under aerobic conditions Back     alignment and domain information
>gnl|CDD|181285 PRK08199, PRK08199, thiamine pyrophosphate protein; Validated Back     alignment and domain information
>gnl|CDD|180368 PRK06048, PRK06048, acetolactate synthase 3 catalytic subunit; Reviewed Back     alignment and domain information
>gnl|CDD|215261 PLN02470, PLN02470, acetolactate synthase Back     alignment and domain information
>gnl|CDD|236041 PRK07524, PRK07524, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|236063 PRK07586, PRK07586, hypothetical protein; Validated Back     alignment and domain information
>gnl|CDD|236312 PRK08617, PRK08617, acetolactate synthase; Reviewed Back     alignment and domain information
>gnl|CDD|238964 cd02006, TPP_Gcl, Thiamine pyrophosphate (TPP) family, Gcl subfamily, TPP-binding module; composed of proteins similar to Escherichia coli glyoxylate carboligase (Gcl) Back     alignment and domain information
>gnl|CDD|236014 PRK07418, PRK07418, acetolactate synthase 3 catalytic subunit; Reviewed Back     alignment and domain information
>gnl|CDD|213733 TIGR02720, pyruv_oxi_spxB, pyruvate oxidase Back     alignment and domain information
>gnl|CDD|235721 PRK06163, PRK06163, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|181337 PRK08266, PRK08266, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|181185 PRK07979, PRK07979, acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>gnl|CDD|183066 PRK11269, PRK11269, glyoxylate carboligase; Provisional Back     alignment and domain information
>gnl|CDD|132920 cd07037, TPP_PYR_MenD, Pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1- carboxylate synthase (MenD) and related proteins Back     alignment and domain information
>gnl|CDD|236098 PRK07789, PRK07789, acetolactate synthase 1 catalytic subunit; Validated Back     alignment and domain information
>gnl|CDD|168717 PRK06882, PRK06882, acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 585
PLN02573578 pyruvate decarboxylase 100.0
COG0028550 IlvB Thiamine pyrophosphate-requiring enzymes [ace 100.0
TIGR01504588 glyox_carbo_lig glyoxylate carboligase. Glyoxylate 100.0
COG3961557 Pyruvate decarboxylase and related thiamine pyroph 100.0
PRK08979572 acetolactate synthase 3 catalytic subunit; Validat 100.0
PRK06965587 acetolactate synthase 3 catalytic subunit; Validat 100.0
PRK07979574 acetolactate synthase 3 catalytic subunit; Validat 100.0
PRK06466574 acetolactate synthase 3 catalytic subunit; Validat 100.0
PRK09107595 acetolactate synthase 3 catalytic subunit; Validat 100.0
TIGR03393539 indolpyr_decarb indolepyruvate decarboxylase, Erwi 100.0
PRK08322547 acetolactate synthase; Reviewed 100.0
TIGR03394535 indol_phenyl_DC indolepyruvate/phenylpyruvate deca 100.0
PRK11269591 glyoxylate carboligase; Provisional 100.0
PRK07282566 acetolactate synthase catalytic subunit; Reviewed 100.0
PRK07418616 acetolactate synthase 3 catalytic subunit; Reviewe 100.0
PRK06725570 acetolactate synthase 3 catalytic subunit; Validat 100.0
PRK06048561 acetolactate synthase 3 catalytic subunit; Reviewe 100.0
PRK08978548 acetolactate synthase 2 catalytic subunit; Reviewe 100.0
PRK07789612 acetolactate synthase 1 catalytic subunit; Validat 100.0
KOG1184561 consensus Thiamine pyrophosphate-requiring enzyme 100.0
PRK06456572 acetolactate synthase catalytic subunit; Reviewed 100.0
PRK08527563 acetolactate synthase 3 catalytic subunit; Validat 100.0
PRK08617552 acetolactate synthase; Reviewed 100.0
PLN02470585 acetolactate synthase 100.0
TIGR03457579 sulphoacet_xsc sulfoacetaldehyde acetyltransferase 100.0
PRK08611576 pyruvate oxidase; Provisional 100.0
PRK08273597 thiamine pyrophosphate protein; Provisional 100.0
PRK08155564 acetolactate synthase catalytic subunit; Validated 100.0
TIGR02418539 acolac_catab acetolactate synthase, catabolic. Ace 100.0
CHL00099585 ilvB acetohydroxyacid synthase large subunit 100.0
PRK06457549 pyruvate dehydrogenase; Provisional 100.0
PRK07710571 acetolactate synthase catalytic subunit; Reviewed 100.0
PRK09124574 pyruvate dehydrogenase; Provisional 100.0
PRK06546578 pyruvate dehydrogenase; Provisional 100.0
PRK05858542 hypothetical protein; Provisional 100.0
TIGR00118558 acolac_lg acetolactate synthase, large subunit, bi 100.0
PRK06882574 acetolactate synthase 3 catalytic subunit; Validat 100.0
TIGR02720575 pyruv_oxi_spxB pyruvate oxidase. Members of this f 100.0
PRK08199557 thiamine pyrophosphate protein; Validated 100.0
PRK06154565 hypothetical protein; Provisional 100.0
PRK06276586 acetolactate synthase catalytic subunit; Reviewed 100.0
PRK07524535 hypothetical protein; Provisional 100.0
TIGR03254554 oxalate_oxc oxalyl-CoA decarboxylase. In a number 100.0
PRK07525588 sulfoacetaldehyde acetyltransferase; Validated 100.0
PRK07064544 hypothetical protein; Provisional 100.0
PRK09259569 putative oxalyl-CoA decarboxylase; Validated 100.0
PRK08266542 hypothetical protein; Provisional 100.0
PRK06112578 acetolactate synthase catalytic subunit; Validated 100.0
PRK12474518 hypothetical protein; Provisional 100.0
PRK07586514 hypothetical protein; Validated 100.0
PRK08327569 acetolactate synthase catalytic subunit; Validated 100.0
KOG1185571 consensus Thiamine pyrophosphate-requiring enzyme 100.0
PRK07092530 benzoylformate decarboxylase; Reviewed 100.0
PRK07449568 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1 100.0
KOG4166675 consensus Thiamine pyrophosphate-requiring enzyme 100.0
PLN02980 1655 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi 100.0
COG3960592 Glyoxylate carboligase [General function predictio 100.0
TIGR00173432 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohex 100.0
COG3962617 Acetolactate synthase [Amino acid transport and me 100.0
COG1165566 MenD 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-car 100.0
cd07039164 TPP_PYR_POX Pyrimidine (PYR) binding domain of POX 100.0
cd07037162 TPP_PYR_MenD Pyrimidine (PYR) binding domain of 2- 100.0
cd07038162 TPP_PYR_PDC_IPDC_like Pyrimidine (PYR) binding dom 100.0
PF02776172 TPP_enzyme_N: Thiamine pyrophosphate enzyme, N-ter 100.0
TIGR03297361 Ppyr-DeCO2ase phosphonopyruvate decarboxylase. Thi 100.0
cd02013196 TPP_Xsc_like Thiamine pyrophosphate (TPP) family, 100.0
cd02006202 TPP_Gcl Thiamine pyrophosphate (TPP) family, Gcl s 100.0
TIGR03336595 IOR_alpha indolepyruvate ferredoxin oxidoreductase 100.0
cd02005183 TPP_PDC_IPDC Thiamine pyrophosphate (TPP) family, 100.0
cd02010177 TPP_ALS Thiamine pyrophosphate (TPP) family, Aceto 100.0
cd02015186 TPP_AHAS Thiamine pyrophosphate (TPP) family, Acet 100.0
cd02003205 TPP_IolD Thiamine pyrophosphate (TPP) family, IolD 100.0
cd02009175 TPP_SHCHC_synthase Thiamine pyrophosphate (TPP) fa 100.0
cd02014178 TPP_POX Thiamine pyrophosphate (TPP) family, Pyruv 100.0
cd02004172 TPP_BZL_OCoD_HPCL Thiamine pyrophosphate (TPP) fam 100.0
cd07035155 TPP_PYR_POX_like Pyrimidine (PYR) binding domain o 100.0
PRK06163202 hypothetical protein; Provisional 99.97
cd02002178 TPP_BFDC Thiamine pyrophosphate (TPP) family, BFDC 99.97
cd02001157 TPP_ComE_PpyrDC Thiamine pyrophosphate (TPP) famil 99.97
cd07034160 TPP_PYR_PFOR_IOR-alpha_like Pyrimidine (PYR) bindi 99.97
TIGR03846181 sulfopy_beta sulfopyruvate decarboxylase, beta sub 99.97
cd03371188 TPP_PpyrDC Thiamine pyrophosphate (TPP) family, Pp 99.96
PF02775153 TPP_enzyme_C: Thiamine pyrophosphate enzyme, C-ter 99.96
cd06586154 TPP_enzyme_PYR Pyrimidine (PYR) binding domain of 99.96
cd02008178 TPP_IOR_alpha Thiamine pyrophosphate (TPP) family, 99.96
cd03375193 TPP_OGFOR Thiamine pyrophosphate (TPP family), 2-o 99.95
cd03372179 TPP_ComE Thiamine pyrophosphate (TPP) family, ComE 99.95
cd00568168 TPP_enzymes Thiamine pyrophosphate (TPP) enzyme fa 99.95
cd03376235 TPP_PFOR_porB_like Thiamine pyrophosphate (TPP fam 99.95
cd02018237 TPP_PFOR Thiamine pyrophosphate (TPP family), Pyru 99.95
PRK09628277 oorB 2-oxoglutarate-acceptor oxidoreductase subuni 99.94
TIGR03845157 sulfopyru_alph sulfopyruvate decarboxylase, alpha 99.93
PRK05778301 2-oxoglutarate ferredoxin oxidoreductase subunit b 99.93
PRK11867286 2-oxoglutarate ferredoxin oxidoreductase subunit b 99.93
PRK11869280 2-oxoacid ferredoxin oxidoreductase subunit beta; 99.92
PRK11866279 2-oxoacid ferredoxin oxidoreductase subunit beta; 99.91
TIGR02177287 PorB_KorB 2-oxoacid:acceptor oxidoreductase, beta 99.9
COG4231640 Indolepyruvate ferredoxin oxidoreductase, alpha an 99.85
PRK13030 1159 2-oxoacid ferredoxin oxidoreductase; Provisional 99.76
PRK09193 1165 indolepyruvate ferredoxin oxidoreductase; Validate 99.75
cd02012255 TPP_TK Thiamine pyrophosphate (TPP) family, Transk 99.73
TIGR03181341 PDH_E1_alph_x pyruvate dehydrogenase E1 component, 99.7
cd02000293 TPP_E1_PDC_ADC_BCADC Thiamine pyrophosphate (TPP) 99.68
PF00205137 TPP_enzyme_M: Thiamine pyrophosphate enzyme, centr 99.67
PRK13029 1186 2-oxoacid ferredoxin oxidoreductase; Provisional 99.67
TIGR03182315 PDH_E1_alph_y pyruvate dehydrogenase E1 component, 99.64
CHL00149341 odpA pyruvate dehydrogenase E1 component alpha sub 99.61
PRK05899 624 transketolase; Reviewed 99.6
PLN02374433 pyruvate dehydrogenase (acetyl-transferring) 99.47
PRK11865299 pyruvate ferredoxin oxidoreductase subunit beta; P 99.47
cd02007195 TPP_DXS Thiamine pyrophosphate (TPP) family, DXS s 99.44
PRK11864300 2-ketoisovalerate ferredoxin oxidoreductase subuni 99.37
PRK05444 580 1-deoxy-D-xylulose-5-phosphate synthase; Provision 99.36
PRK12571 641 1-deoxy-D-xylulose-5-phosphate synthase; Provision 99.09
COG1013294 PorB Pyruvate:ferredoxin oxidoreductase and relate 99.0
PRK08659376 2-oxoglutarate ferredoxin oxidoreductase subunit a 98.98
PRK09627375 oorA 2-oxoglutarate-acceptor oxidoreductase subuni 98.97
PLN02790 654 transketolase 98.96
PRK07119352 2-ketoisovalerate ferredoxin reductase; Validated 98.93
TIGR03710562 OAFO_sf 2-oxoacid:acceptor oxidoreductase, alpha s 98.91
COG4032172 Predicted thiamine-pyrophosphate-binding protein [ 98.85
PRK12754 663 transketolase; Reviewed 98.85
PF00456332 Transketolase_N: Transketolase, thiamine diphospha 98.85
PTZ00089 661 transketolase; Provisional 98.85
TIGR00232 653 tktlase_bact transketolase, bacterial and yeast. T 98.84
PRK12753 663 transketolase; Reviewed 98.83
PRK00945171 acetyl-CoA decarbonylase/synthase complex subunit 98.8
PRK08366390 vorA 2-ketoisovalerate ferredoxin oxidoreductase s 98.8
PRK12315 581 1-deoxy-D-xylulose-5-phosphate synthase; Provision 98.79
PRK08367394 porA pyruvate ferredoxin oxidoreductase subunit al 98.78
PRK09622407 porA pyruvate flavodoxin oxidoreductase subunit al 98.77
PF01855230 POR_N: Pyruvate flavodoxin/ferredoxin oxidoreducta 98.72
COG3959243 Transketolase, N-terminal subunit [Carbohydrate tr 98.71
PF00676300 E1_dh: Dehydrogenase E1 component; InterPro: IPR00 98.69
cd02017386 TPP_E1_EcPDC_like Thiamine pyrophosphate (TPP) fam 98.68
TIGR00315162 cdhB CO dehydrogenase/acetyl-CoA synthase complex, 98.65
COG1071358 AcoA Pyruvate/2-oxoglutarate dehydrogenase complex 98.61
PF13292270 DXP_synthase_N: 1-deoxy-D-xylulose-5-phosphate syn 98.59
PLN02269362 Pyruvate dehydrogenase E1 component subunit alpha 98.57
COG0021 663 TktA Transketolase [Carbohydrate transport and met 98.56
TIGR00204 617 dxs 1-deoxy-D-xylulose-5-phosphate synthase. DXP s 98.5
PLN02234 641 1-deoxy-D-xylulose-5-phosphate synthase 98.49
cd02016265 TPP_E1_OGDC_like Thiamine pyrophosphate (TPP) fami 98.46
cd03377365 TPP_PFOR_PNO Thiamine pyrophosphate (TPP family), 98.45
cd02011227 TPP_PK Thiamine pyrophosphate (TPP) family, Phosph 98.4
TIGR03186 889 AKGDH_not_PDH alpha-ketoglutarate dehydrogenase. S 98.36
COG0674365 PorA Pyruvate:ferredoxin oxidoreductase and relate 98.33
TIGR00759 885 aceE pyruvate dehydrogenase E1 component, homodime 98.23
PLN02582 677 1-deoxy-D-xylulose-5-phosphate synthase 98.19
PRK13012 896 2-oxoacid dehydrogenase subunit E1; Provisional 98.18
KOG0523 632 consensus Transketolase [Carbohydrate transport an 98.16
PRK09405 891 aceE pyruvate dehydrogenase subunit E1; Reviewed 98.1
PLN02225 701 1-deoxy-D-xylulose-5-phosphate synthase 98.08
PRK09404 924 sucA 2-oxoglutarate dehydrogenase E1 component; Re 98.05
COG1154 627 Dxs Deoxyxylulose-5-phosphate synthase [Coenzyme m 97.96
PRK05261 785 putative phosphoketolase; Provisional 97.92
TIGR00239 929 2oxo_dh_E1 2-oxoglutarate dehydrogenase, E1 compon 97.87
TIGR02176 1165 pyruv_ox_red pyruvate:ferredoxin (flavodoxin) oxid 97.75
TIGR021761165 pyruv_ox_red pyruvate:ferredoxin (flavodoxin) oxid 97.59
KOG0225394 consensus Pyruvate dehydrogenase E1, alpha subunit 97.54
KOG1182432 consensus Branched chain alpha-keto acid dehydroge 97.13
cd07035155 TPP_PYR_POX_like Pyrimidine (PYR) binding domain o 97.0
cd07039164 TPP_PYR_POX Pyrimidine (PYR) binding domain of POX 96.91
COG1880170 CdhB CO dehydrogenase/acetyl-CoA synthase epsilon 96.8
PF02776172 TPP_enzyme_N: Thiamine pyrophosphate enzyme, N-ter 96.77
cd07033156 TPP_PYR_DXS_TK_like Pyrimidine (PYR) binding domai 96.33
cd06586154 TPP_enzyme_PYR Pyrimidine (PYR) binding domain of 96.13
cd07038162 TPP_PYR_PDC_IPDC_like Pyrimidine (PYR) binding dom 96.01
cd07037162 TPP_PYR_MenD Pyrimidine (PYR) binding domain of 2- 95.53
PF09364379 XFP_N: XFP N-terminal domain; InterPro: IPR018970 95.08
TIGR03845157 sulfopyru_alph sulfopyruvate decarboxylase, alpha 94.99
smart00861168 Transket_pyr Transketolase, pyrimidine binding dom 94.98
cd02013196 TPP_Xsc_like Thiamine pyrophosphate (TPP) family, 94.73
PLN02470 585 acetolactate synthase 94.49
TIGR00232653 tktlase_bact transketolase, bacterial and yeast. T 94.4
PRK07524 535 hypothetical protein; Provisional 94.38
PRK09259 569 putative oxalyl-CoA decarboxylase; Validated 94.38
TIGR03254 554 oxalate_oxc oxalyl-CoA decarboxylase. In a number 94.35
PRK08611 576 pyruvate oxidase; Provisional 94.29
PRK06965 587 acetolactate synthase 3 catalytic subunit; Validat 94.27
PF02775153 TPP_enzyme_C: Thiamine pyrophosphate enzyme, C-ter 94.24
PRK08322 547 acetolactate synthase; Reviewed 94.24
PTZ00182355 3-methyl-2-oxobutanate dehydrogenase; Provisional 94.24
PRK07979 574 acetolactate synthase 3 catalytic subunit; Validat 94.18
COG3957 793 Phosphoketolase [Carbohydrate transport and metabo 94.12
PRK09107 595 acetolactate synthase 3 catalytic subunit; Validat 94.09
COG0028 550 IlvB Thiamine pyrophosphate-requiring enzymes [ace 94.08
TIGR01504 588 glyox_carbo_lig glyoxylate carboligase. Glyoxylate 94.07
PRK07586 514 hypothetical protein; Validated 94.05
PRK07789 612 acetolactate synthase 1 catalytic subunit; Validat 94.03
cd02004172 TPP_BZL_OCoD_HPCL Thiamine pyrophosphate (TPP) fam 94.01
PRK06725 570 acetolactate synthase 3 catalytic subunit; Validat 93.93
PTZ00089661 transketolase; Provisional 93.87
cd02006202 TPP_Gcl Thiamine pyrophosphate (TPP) family, Gcl s 93.77
PRK12753663 transketolase; Reviewed 93.76
PRK12754663 transketolase; Reviewed 93.75
PRK08266 542 hypothetical protein; Provisional 93.72
PRK06466 574 acetolactate synthase 3 catalytic subunit; Validat 93.62
PRK06276 586 acetolactate synthase catalytic subunit; Reviewed 93.61
PRK07525 588 sulfoacetaldehyde acetyltransferase; Validated 93.56
PLN02790654 transketolase 93.53
PRK05858 542 hypothetical protein; Provisional 93.46
TIGR00118 558 acolac_lg acetolactate synthase, large subunit, bi 93.41
PRK07418 616 acetolactate synthase 3 catalytic subunit; Reviewe 93.41
PRK07710 571 acetolactate synthase catalytic subunit; Reviewed 93.39
PRK08979 572 acetolactate synthase 3 catalytic subunit; Validat 93.31
cd07034160 TPP_PYR_PFOR_IOR-alpha_like Pyrimidine (PYR) bindi 93.29
PF00676300 E1_dh: Dehydrogenase E1 component; InterPro: IPR00 93.27
PRK11269 591 glyoxylate carboligase; Provisional 93.25
cd02001157 TPP_ComE_PpyrDC Thiamine pyrophosphate (TPP) famil 93.24
cd02009175 TPP_SHCHC_synthase Thiamine pyrophosphate (TPP) fa 93.24
PRK06456 572 acetolactate synthase catalytic subunit; Reviewed 93.2
PRK12474 518 hypothetical protein; Provisional 93.19
PRK06882 574 acetolactate synthase 3 catalytic subunit; Validat 93.17
TIGR03181341 PDH_E1_alph_x pyruvate dehydrogenase E1 component, 93.12
cd02005183 TPP_PDC_IPDC Thiamine pyrophosphate (TPP) family, 93.07
PF02779178 Transket_pyr: Transketolase, pyrimidine binding do 93.04
PRK06048 561 acetolactate synthase 3 catalytic subunit; Reviewe 93.0
TIGR02720 575 pyruv_oxi_spxB pyruvate oxidase. Members of this f 92.78
PRK07064 544 hypothetical protein; Provisional 92.58
PF02552167 CO_dh: CO dehydrogenase beta subunit/acetyl-CoA sy 92.57
TIGR03457 579 sulphoacet_xsc sulfoacetaldehyde acetyltransferase 92.52
cd02003205 TPP_IolD Thiamine pyrophosphate (TPP) family, IolD 92.46
PRK07282 566 acetolactate synthase catalytic subunit; Reviewed 92.46
TIGR02418 539 acolac_catab acetolactate synthase, catabolic. Ace 92.45
PRK06457 549 pyruvate dehydrogenase; Provisional 92.44
PRK06112 578 acetolactate synthase catalytic subunit; Validated 92.42
cd02010177 TPP_ALS Thiamine pyrophosphate (TPP) family, Aceto 92.38
PRK08617 552 acetolactate synthase; Reviewed 92.38
PRK08978 548 acetolactate synthase 2 catalytic subunit; Reviewe 92.35
PRK11892464 pyruvate dehydrogenase subunit beta; Provisional 92.35
PRK08527 563 acetolactate synthase 3 catalytic subunit; Validat 92.34
PRK08155 564 acetolactate synthase catalytic subunit; Validated 92.26
cd02015186 TPP_AHAS Thiamine pyrophosphate (TPP) family, Acet 92.24
PRK08327 569 acetolactate synthase catalytic subunit; Validated 92.18
cd02008178 TPP_IOR_alpha Thiamine pyrophosphate (TPP) family, 92.06
PRK08199 557 thiamine pyrophosphate protein; Validated 92.01
CHL00099 585 ilvB acetohydroxyacid synthase large subunit 91.99
TIGR00173 432 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohex 91.85
cd07036167 TPP_PYR_E1-PDHc-beta_like Pyrimidine (PYR) binding 91.7
PRK12571641 1-deoxy-D-xylulose-5-phosphate synthase; Provision 91.38
PRK11866279 2-oxoacid ferredoxin oxidoreductase subunit beta; 91.35
cd00568168 TPP_enzymes Thiamine pyrophosphate (TPP) enzyme fa 91.26
PRK08273 597 thiamine pyrophosphate protein; Provisional 90.95
PRK06154 565 hypothetical protein; Provisional 90.95
PRK06546 578 pyruvate dehydrogenase; Provisional 90.75
TIGR00204617 dxs 1-deoxy-D-xylulose-5-phosphate synthase. DXP s 90.72
PRK07092 530 benzoylformate decarboxylase; Reviewed 90.52
cd02000293 TPP_E1_PDC_ADC_BCADC Thiamine pyrophosphate (TPP) 90.51
PRK05899624 transketolase; Reviewed 90.46
TIGR03297 361 Ppyr-DeCO2ase phosphonopyruvate decarboxylase. Thi 90.42
cd07033156 TPP_PYR_DXS_TK_like Pyrimidine (PYR) binding domai 90.26
COG1071358 AcoA Pyruvate/2-oxoglutarate dehydrogenase complex 89.79
PRK05778301 2-oxoglutarate ferredoxin oxidoreductase subunit b 89.7
cd02002178 TPP_BFDC Thiamine pyrophosphate (TPP) family, BFDC 89.57
cd07036167 TPP_PYR_E1-PDHc-beta_like Pyrimidine (PYR) binding 89.51
PRK12315581 1-deoxy-D-xylulose-5-phosphate synthase; Provision 89.5
PRK05444580 1-deoxy-D-xylulose-5-phosphate synthase; Provision 89.44
TIGR03182315 PDH_E1_alph_y pyruvate dehydrogenase E1 component, 89.38
cd03375193 TPP_OGFOR Thiamine pyrophosphate (TPP family), 2-o 89.36
cd02014178 TPP_POX Thiamine pyrophosphate (TPP) family, Pyruv 89.18
PRK06163202 hypothetical protein; Provisional 88.92
TIGR03394 535 indol_phenyl_DC indolepyruvate/phenylpyruvate deca 88.57
cd03372179 TPP_ComE Thiamine pyrophosphate (TPP) family, ComE 88.52
TIGR03846181 sulfopy_beta sulfopyruvate decarboxylase, beta sub 88.14
PRK12270 1228 kgd alpha-ketoglutarate decarboxylase; Reviewed 88.09
PRK09124 574 pyruvate dehydrogenase; Provisional 87.82
cd03371188 TPP_PpyrDC Thiamine pyrophosphate (TPP) family, Pp 87.5
COG3958312 Transketolase, C-terminal subunit [Carbohydrate tr 87.44
PRK09628277 oorB 2-oxoglutarate-acceptor oxidoreductase subuni 87.35
CHL00144327 odpB pyruvate dehydrogenase E1 component beta subu 87.21
PLN02582677 1-deoxy-D-xylulose-5-phosphate synthase 87.2
PRK13012896 2-oxoacid dehydrogenase subunit E1; Provisional 87.14
PLN02374433 pyruvate dehydrogenase (acetyl-transferring) 87.07
PRK11869280 2-oxoacid ferredoxin oxidoreductase subunit beta; 86.25
CHL00149341 odpA pyruvate dehydrogenase E1 component alpha sub 86.25
PLN02683356 pyruvate dehydrogenase E1 component subunit beta 85.67
PLN02573 578 pyruvate decarboxylase 85.13
PLN02225701 1-deoxy-D-xylulose-5-phosphate synthase 84.77
cd02018237 TPP_PFOR Thiamine pyrophosphate (TPP family), Pyru 84.67
TIGR03336595 IOR_alpha indolepyruvate ferredoxin oxidoreductase 83.2
PF02779178 Transket_pyr: Transketolase, pyrimidine binding do 82.91
PRK07449568 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1 82.16
COG2609 887 AceE Pyruvate dehydrogenase complex, dehydrogenase 81.9
cd03376235 TPP_PFOR_porB_like Thiamine pyrophosphate (TPP fam 81.72
TIGR02177287 PorB_KorB 2-oxoacid:acceptor oxidoreductase, beta 80.5
COG1029429 FwdB Formylmethanofuran dehydrogenase subunit B [E 80.49
cd01460266 vWA_midasin VWA_Midasin: Midasin is a member of th 80.25
>PLN02573 pyruvate decarboxylase Back     alignment and domain information 
Probab=100.00  E-value=5.1e-97  Score=813.65  Aligned_cols=547  Identities=90%  Similarity=1.433  Sum_probs=447.1

Q ss_pred             cCCCCCcHHHHHHHHHHHcCCCEEEecCCCChHHHHHhhhcCCCCeEEeCcchHHHHHHHhHHhHhcCccEEEEeCChhh
Q 044559           39 VNPSESTLGRHLARRLVQIGATDVFSVPGDFNLTLLDHLIAEPGLNLIGCCNELNAGYAADGYARSRGVGACVVTFTVGG  118 (585)
Q Consensus        39 ~~~~~~~~a~~i~~~L~~~GV~~vFg~PG~~~~~l~~al~~~~~i~~i~~~~E~~A~~~A~Gyar~tg~~v~~~tsGpG~  118 (585)
                      +....++++++|++.|+++||+||||+||+++++|+++|.+..+|++|.+|||++|+||||||||+||.|||++|+|||+
T Consensus        11 ~~~~~~~~a~~l~~~L~~~Gv~~vFGvpG~~~~~l~dal~~~~~i~~i~~rhE~~A~~mAdgyaR~tg~gv~~~t~GpG~   90 (578)
T PLN02573         11 VSSSDATLGRHLARRLVEIGVTDVFSVPGDFNLTLLDHLIAEPGLNLIGCCNELNAGYAADGYARARGVGACVVTFTVGG   90 (578)
T ss_pred             cccccccHHHHHHHHHHHcCCCEEEECCCCchHHHHHHHhhcCCceEEEeCCHHHHHHHHHHHHHHhCCCeEEEecCccH
Confidence            34445799999999999999999999999999999999965457999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhhcCCcEEEEeCCCCCcccCCccccccccCCCChhHHHhhhcceeEEEEEeCChhhHHHHHHHHHHHhhh
Q 044559          119 LSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCYQAVVNNLEDAHELIDTAVSTALK  198 (585)
Q Consensus       119 ~n~~~~l~~A~~~~~PllvI~g~~~~~~~~~~~~~~~~~~~~~~~dq~~~~~~~tk~~~~v~~~~~~~~~l~~A~~~a~~  198 (585)
                      +|+++||++||.+++|||+|+|+.+....+++..+||.....++.++.++|+++|||+.++.+++++++.+++|++.|++
T Consensus        91 ~n~~~gla~A~~d~~Pvl~I~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itk~s~~v~~~~~~~~~l~~A~~~A~~  170 (578)
T PLN02573         91 LSVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCYQAVINNLEDAHELIDTAISTALK  170 (578)
T ss_pred             HHHHHHHHHHHHhCCCEEEEECCCChhhhhcCceeeeecCCCChHHHHHHhhceEEEEEEeCCHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999998877777667766543345567899999999999999999999999999999999


Q ss_pred             cCCcEEEEecCCCCCCCCCCCCCCCCCCcCCCCCCChhhHHHHHHHHHHHHHhcCCCEEEcCCcccccchHHHHHHHHHH
Q 044559          199 ESKPVYISVACNLPAIPHPTFSREPVPFSLSPKLSNEMGLEAAVEAAAEFLNKAVKPVLVAGPKMRVAKACNAFVELADA  278 (585)
Q Consensus       199 ~~GPV~i~iP~dv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~L~~a~rpvIi~G~g~~~~~a~~~l~~lae~  278 (585)
                      ++|||||+||.|++..+.+.....+.+....+......+.+..+++++++|.+||||+|++|.|+.++++.+++++|||+
T Consensus       171 ~~gPV~l~iP~Dv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~L~~AkrPvil~G~g~~~~~a~~~l~~lae~  250 (578)
T PLN02573        171 ESKPVYISVSCNLAAIPHPTFSREPVPFFLTPRLSNKMSLEAAVEAAAEFLNKAVKPVLVGGPKLRVAKACKAFVELADA  250 (578)
T ss_pred             cCCCEEEEeehhhhcCccccccCCCCCcccccCCCChHHHHHHHHHHHHHHHhCCCCEEEEChhhcccchHHHHHHHHHH
Confidence            99999999999997643211111111111111111112356779999999999999999999999999999999999999


Q ss_pred             hCCceEeCCCCccccCCCCCCccccccCCCCCCc---------------------ccccccccCCCccEEEEcCCcceec
Q 044559          279 CGYAVAVMPSAKGLVPEHHPHFIGTYWGAVSTAF---------------------FSVGYSLLLKKEKAVILQPDRVVIA  337 (585)
Q Consensus       279 ~~~Pv~tt~~gkg~~~~~hp~~~g~~~g~~~~~~---------------------~~~~~~~~~~~~~~i~vd~d~~~i~  337 (585)
                      +|+||+||++|||+||++||+++|.+.|..+...                     .+.+|..+.++.++||||.|+..++
T Consensus       251 ~~~PV~tt~~gkg~~pe~hpl~~G~~~G~~~~~~~~~~~~~aDlvl~lG~~l~~~~~~~~~~~~~~~~~I~id~d~~~i~  330 (578)
T PLN02573        251 SGYPVAVMPSAKGLVPEHHPHFIGTYWGAVSTPFCAEIVESADAYLFAGPIFNDYSSVGYSLLLKKEKAIIVQPDRVTIG  330 (578)
T ss_pred             hCCCEEECcccCCCCCCcCCCceEEeeCCCCCHHHHHHHHhCCEEEEECCccCCcccccccccCCCCcEEEEeCCEEEEC
Confidence            9999999999999999999999998744433221                     1223433445678999999999997


Q ss_pred             cCCccccccHHHHHHHHHHHhccCcchhhhhccccCCCCCCCCCCCCCCcCHHHHHHHHHhhCCCCCEEEecCCcccccc
Q 044559          338 NGPAFGCVLMKDFLKALSKRLKSNTTAYENYHRIYVPEGQPPKCEPKEPLRVNVLFQHIQKMLSSETAVIAETGDSWFNC  417 (585)
Q Consensus       338 ~~~~~~~~~~~~~l~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~l~~~~iiv~d~G~~~~~~  417 (585)
                      +...+...+++.+|++|.+.++.....|..|++...............++++.++++.|++.++++++++.|+|++++..
T Consensus       331 ~~~~~~~~~~~~~l~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~l~~d~iiv~D~G~~~~~~  410 (578)
T PLN02573        331 NGPAFGCVLMKDFLEALAKRVKKNTTAYENYKRIFVPEGEPLKSEPGEPLRVNVLFKHIQKMLSGDTAVIAETGDSWFNC  410 (578)
T ss_pred             CcceECCcCHHHHHHHHHHHhhccccccccccccccCcccCCCCCCCCccCHHHHHHHHHHhcCCCCEEEEecccchhhH
Confidence            32233344789999999988764322222332211111100111123469999999999999999999999999985433


Q ss_pred             ccccccCCCeeeecCCcccccchhHHHHhhhhcCCCCcEEEEEccchhcccHHHHHHHHHhCCceEEEEEeCCcceeeee
Q 044559          418 QKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVE  497 (585)
Q Consensus       418 ~~~~~~~~~~~~~~~~~g~mG~~lpaAiGaalA~p~r~vv~v~GDGsf~~~~~eL~ta~~~~lpv~ivV~NN~~~~~~~~  497 (585)
                      .+++.+++.+++.+.++|+|||++|+|||+++|.|+|+||+|+|||||+|++|||+|++||++|+++||+||++|++.+.
T Consensus       411 ~~~~~~~~~~~~~~~~~gsmG~glpaaiGa~lA~p~r~vv~i~GDG~f~m~~~EL~Ta~r~~lpvv~vV~NN~~yg~~~~  490 (578)
T PLN02573        411 QKLKLPEGCGYEFQMQYGSIGWSVGATLGYAQAAPDKRVIACIGDGSFQVTAQDVSTMIRCGQKSIIFLINNGGYTIEVE  490 (578)
T ss_pred             HhccCCCCCeEEeecchhhhhhhhhHHHHHHHhCCCCceEEEEeccHHHhHHHHHHHHHHcCCCCEEEEEeCCceeEEEe
Confidence            45667777778899999999999999999999999999999999999999999999999999999999999999998655


Q ss_pred             ecCCCcCCCCCCChHHHHHHhcCCCCCceeEEEcCHHHHHHHHHhhcCCCCCCeEEEEEEcCCCCChHHHHHHHHHhhhh
Q 044559          498 IHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDDTSKELLEWGSRVSAA  577 (585)
Q Consensus       498 ~~~~~~~~~~~~d~~~la~a~G~~~~~~~~~~V~~~~eL~~aL~~a~~~~~~gp~vIeV~v~~~~~~~~~~~~~~~~~~~  577 (585)
                      .++..+.++.++||.++|++||...+.+++++|++.+||+++|+++++...++|+||||.+++++.+..+..|..+++..
T Consensus       491 ~~~~~~~~~~~~d~~~lA~a~G~~~g~~~~~~V~~~~eL~~al~~a~~~~~~~p~lieV~v~~~~~~~~~~~~~~~~~~~  570 (578)
T PLN02573        491 IHDGPYNVIKNWNYTGLVDAIHNGEGKCWTAKVRTEEELIEAIATATGEKKDCLCFIEVIVHKDDTSKELLEWGSRVSAA  570 (578)
T ss_pred             ecccCccccCCCCHHHHHHHhcCcCCceeEEEecCHHHHHHHHHHHHhhCCCCcEEEEEEcCcCCCCHHHHHHHHHHhhc
Confidence            44445666678999999999972111128999999999999999998312689999999999999999999999999999


Q ss_pred             cCCCCCCC
Q 044559          578 NSRPPNPQ  585 (585)
Q Consensus       578 ~~~~~~~~  585 (585)
                      |++++|||
T Consensus       571 ~~~~~~~~  578 (578)
T PLN02573        571 NSRPPNPQ  578 (578)
T ss_pred             ccCCCCCC
Confidence            99999998

>COG0028 IlvB Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>TIGR01504 glyox_carbo_lig glyoxylate carboligase Back     alignment and domain information
>COG3961 Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes [Carbohydrate transport and metabolism / Coenzyme metabolism / General function prediction only] Back     alignment and domain information
>PRK08979 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK06965 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK07979 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK06466 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK09107 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>TIGR03393 indolpyr_decarb indolepyruvate decarboxylase, Erwinia family Back     alignment and domain information
>PRK08322 acetolactate synthase; Reviewed Back     alignment and domain information
>TIGR03394 indol_phenyl_DC indolepyruvate/phenylpyruvate decarboxylase, Azospirillum family Back     alignment and domain information
>PRK11269 glyoxylate carboligase; Provisional Back     alignment and domain information
>PRK07282 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>PRK07418 acetolactate synthase 3 catalytic subunit; Reviewed Back     alignment and domain information
>PRK06725 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK06048 acetolactate synthase 3 catalytic subunit; Reviewed Back     alignment and domain information
>PRK08978 acetolactate synthase 2 catalytic subunit; Reviewed Back     alignment and domain information
>PRK07789 acetolactate synthase 1 catalytic subunit; Validated Back     alignment and domain information
>KOG1184 consensus Thiamine pyrophosphate-requiring enzyme [Amino acid transport and metabolism; Coenzyme transport and metabolism] Back     alignment and domain information
>PRK06456 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>PRK08527 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK08617 acetolactate synthase; Reviewed Back     alignment and domain information
>PLN02470 acetolactate synthase Back     alignment and domain information
>TIGR03457 sulphoacet_xsc sulfoacetaldehyde acetyltransferase Back     alignment and domain information
>PRK08611 pyruvate oxidase; Provisional Back     alignment and domain information
>PRK08273 thiamine pyrophosphate protein; Provisional Back     alignment and domain information
>PRK08155 acetolactate synthase catalytic subunit; Validated Back     alignment and domain information
>TIGR02418 acolac_catab acetolactate synthase, catabolic Back     alignment and domain information
>CHL00099 ilvB acetohydroxyacid synthase large subunit Back     alignment and domain information
>PRK06457 pyruvate dehydrogenase; Provisional Back     alignment and domain information
>PRK07710 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>PRK09124 pyruvate dehydrogenase; Provisional Back     alignment and domain information
>PRK06546 pyruvate dehydrogenase; Provisional Back     alignment and domain information
>PRK05858 hypothetical protein; Provisional Back     alignment and domain information
>TIGR00118 acolac_lg acetolactate synthase, large subunit, biosynthetic type Back     alignment and domain information
>PRK06882 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>TIGR02720 pyruv_oxi_spxB pyruvate oxidase Back     alignment and domain information
>PRK08199 thiamine pyrophosphate protein; Validated Back     alignment and domain information
>PRK06154 hypothetical protein; Provisional Back     alignment and domain information
>PRK06276 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>PRK07524 hypothetical protein; Provisional Back     alignment and domain information
>TIGR03254 oxalate_oxc oxalyl-CoA decarboxylase Back     alignment and domain information
>PRK07525 sulfoacetaldehyde acetyltransferase; Validated Back     alignment and domain information
>PRK07064 hypothetical protein; Provisional Back     alignment and domain information
>PRK09259 putative oxalyl-CoA decarboxylase; Validated Back     alignment and domain information
>PRK08266 hypothetical protein; Provisional Back     alignment and domain information
>PRK06112 acetolactate synthase catalytic subunit; Validated Back     alignment and domain information
>PRK12474 hypothetical protein; Provisional Back     alignment and domain information
>PRK07586 hypothetical protein; Validated Back     alignment and domain information
>PRK08327 acetolactate synthase catalytic subunit; Validated Back     alignment and domain information
>KOG1185 consensus Thiamine pyrophosphate-requiring enzyme [Amino acid transport and metabolism; Coenzyme transport and metabolism] Back     alignment and domain information
>PRK07092 benzoylformate decarboxylase; Reviewed Back     alignment and domain information
>PRK07449 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase; Validated Back     alignment and domain information
>KOG4166 consensus Thiamine pyrophosphate-requiring enzyme [Amino acid transport and metabolism; Coenzyme transport and metabolism] Back     alignment and domain information
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding Back     alignment and domain information
>COG3960 Glyoxylate carboligase [General function prediction only] Back     alignment and domain information
>TIGR00173 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase Back     alignment and domain information
>COG3962 Acetolactate synthase [Amino acid transport and metabolism] Back     alignment and domain information
>COG1165 MenD 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [Coenzyme metabolism] Back     alignment and domain information
>cd07039 TPP_PYR_POX Pyrimidine (PYR) binding domain of POX Back     alignment and domain information
>cd07037 TPP_PYR_MenD Pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate synthase (MenD) and related proteins Back     alignment and domain information
>cd07038 TPP_PYR_PDC_IPDC_like Pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC), indolepyruvate decarboxylase (IPDC) and related proteins Back     alignment and domain information
>PF02776 TPP_enzyme_N: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; InterPro: IPR012001 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor Back     alignment and domain information
>TIGR03297 Ppyr-DeCO2ase phosphonopyruvate decarboxylase Back     alignment and domain information
>cd02013 TPP_Xsc_like Thiamine pyrophosphate (TPP) family, Xsc-like subfamily, TPP-binding module; composed of proteins similar to Alcaligenes defragrans sulfoacetaldehyde acetyltransferase (Xsc) Back     alignment and domain information
>cd02006 TPP_Gcl Thiamine pyrophosphate (TPP) family, Gcl subfamily, TPP-binding module; composed of proteins similar to Escherichia coli glyoxylate carboligase (Gcl) Back     alignment and domain information
>TIGR03336 IOR_alpha indolepyruvate ferredoxin oxidoreductase, alpha subunit Back     alignment and domain information
>cd02005 TPP_PDC_IPDC Thiamine pyrophosphate (TPP) family, PDC_IPDC subfamily, TPP-binding module; composed of proteins similar to pyruvate decarboxylase (PDC) and indolepyruvate decarboxylase (IPDC) Back     alignment and domain information
>cd02010 TPP_ALS Thiamine pyrophosphate (TPP) family, Acetolactate synthase (ALS) subfamily, TPP-binding module; composed of proteins similar to Klebsiella pneumoniae ALS, a catabolic enzyme required for butanediol fermentation Back     alignment and domain information
>cd02015 TPP_AHAS Thiamine pyrophosphate (TPP) family, Acetohydroxyacid synthase (AHAS) subfamily, TPP-binding module; composed of proteins similar to the large catalytic subunit of AHAS Back     alignment and domain information
>cd02003 TPP_IolD Thiamine pyrophosphate (TPP) family, IolD subfamily, TPP-binding module; composed of proteins similar to Rhizobium leguminosarum bv Back     alignment and domain information
>cd02009 TPP_SHCHC_synthase Thiamine pyrophosphate (TPP) family, SHCHC synthase subfamily, TPP-binding module; composed of proteins similar to Escherichia coli 2-succinyl-6-hydroxyl-2,4-cyclohexadiene-1-carboxylic acid (SHCHC) synthase (also called MenD) Back     alignment and domain information
>cd02014 TPP_POX Thiamine pyrophosphate (TPP) family, Pyruvate oxidase (POX) subfamily, TPP-binding module; composed of proteins similar to Lactobacillus plantarum POX, which plays a key role in controlling acetate production under aerobic conditions Back     alignment and domain information
>cd02004 TPP_BZL_OCoD_HPCL Thiamine pyrophosphate (TPP) family, BZL_OCoD_HPCL subfamily, TPP-binding module; composed of proteins similar to benzaldehyde lyase (BZL), oxalyl-CoA decarboxylase (OCoD) and 2-hydroxyphytanoyl-CoA lyase (2-HPCL) Back     alignment and domain information
>cd07035 TPP_PYR_POX_like Pyrimidine (PYR) binding domain of POX and related proteins Back     alignment and domain information
>PRK06163 hypothetical protein; Provisional Back     alignment and domain information
>cd02002 TPP_BFDC Thiamine pyrophosphate (TPP) family, BFDC subfamily, TPP-binding module; composed of proteins similar to Pseudomonas putida benzoylformate decarboxylase (BFDC) Back     alignment and domain information
>cd02001 TPP_ComE_PpyrDC Thiamine pyrophosphate (TPP) family, ComE and PpyrDC subfamily, TPP-binding module; composed of proteins similar to sulfopyruvate decarboxylase beta subunit (ComE) and phosphonopyruvate decarboxylase (Ppyr decarboxylase) Back     alignment and domain information
>cd07034 TPP_PYR_PFOR_IOR-alpha_like Pyrimidine (PYR) binding domain of pyruvate ferredoxin oxidoreductase (PFOR), indolepyruvate ferredoxin oxidoreductase alpha subunit (IOR-alpha), and related proteins Back     alignment and domain information
>TIGR03846 sulfopy_beta sulfopyruvate decarboxylase, beta subunit Back     alignment and domain information
>cd03371 TPP_PpyrDC Thiamine pyrophosphate (TPP) family, PpyrDC subfamily, TPP-binding module; composed of proteins similar to phosphonopyruvate decarboxylase (PpyrDC) proteins Back     alignment and domain information
>PF02775 TPP_enzyme_C: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; InterPro: IPR011766 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor Back     alignment and domain information
>cd06586 TPP_enzyme_PYR Pyrimidine (PYR) binding domain of thiamine pyrophosphate (TPP)-dependent enzymes Back     alignment and domain information
>cd02008 TPP_IOR_alpha Thiamine pyrophosphate (TPP) family, IOR-alpha subfamily, TPP-binding module; composed of proteins similar to indolepyruvate ferredoxin oxidoreductase (IOR) alpha subunit Back     alignment and domain information
>cd03375 TPP_OGFOR Thiamine pyrophosphate (TPP family), 2-oxoglutarate ferredoxin oxidoreductase (OGFOR) subfamily, TPP-binding module; OGFOR catalyzes the oxidative decarboxylation of 2-oxo-acids, with ferredoxin acting as an electron acceptor Back     alignment and domain information
>cd03372 TPP_ComE Thiamine pyrophosphate (TPP) family, ComE subfamily, TPP-binding module; composed of proteins similar to Methanococcus jannaschii sulfopyruvate decarboxylase beta subunit (ComE) Back     alignment and domain information
>cd00568 TPP_enzymes Thiamine pyrophosphate (TPP) enzyme family, TPP-binding module; found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor Back     alignment and domain information
>cd03376 TPP_PFOR_porB_like Thiamine pyrophosphate (TPP family), PFOR porB-like subfamily, TPP-binding module; composed of proteins similar to the beta subunit (porB) of the Helicobacter pylori four-subunit pyruvate ferredoxin oxidoreductase (PFOR), which are also found in archaea and some hyperthermophilic bacteria Back     alignment and domain information
>cd02018 TPP_PFOR Thiamine pyrophosphate (TPP family), Pyruvate ferredoxin/flavodoxin oxidoreductase (PFOR) subfamily, TPP-binding module; PFOR catalyzes the oxidative decarboxylation of pyruvate to form acetyl-CoA, a crucial step in many metabolic pathways Back     alignment and domain information
>PRK09628 oorB 2-oxoglutarate-acceptor oxidoreductase subunit OorB; Reviewed Back     alignment and domain information
>TIGR03845 sulfopyru_alph sulfopyruvate decarboxylase, alpha subunit Back     alignment and domain information
>PRK05778 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Validated Back     alignment and domain information
>PRK11867 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Reviewed Back     alignment and domain information
>PRK11869 2-oxoacid ferredoxin oxidoreductase subunit beta; Provisional Back     alignment and domain information
>PRK11866 2-oxoacid ferredoxin oxidoreductase subunit beta; Provisional Back     alignment and domain information
>TIGR02177 PorB_KorB 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family Back     alignment and domain information
>COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits [Energy production and conversion] Back     alignment and domain information
>PRK13030 2-oxoacid ferredoxin oxidoreductase; Provisional Back     alignment and domain information
>PRK09193 indolepyruvate ferredoxin oxidoreductase; Validated Back     alignment and domain information
>cd02012 TPP_TK Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK catalyzes the transfer of a two-carbon unit from ketose phosphates to aldose phosphates Back     alignment and domain information
>TIGR03181 PDH_E1_alph_x pyruvate dehydrogenase E1 component, alpha subunit Back     alignment and domain information
>cd02000 TPP_E1_PDC_ADC_BCADC Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; composed of proteins similar to the E1 components of the human pyruvate dehydrogenase complex (PDC), the acetoin dehydrogenase complex (ADC) and the branched chain alpha-keto acid dehydrogenase/2-oxoisovalerate dehydrogenase complex (BCADC) Back     alignment and domain information
>PF00205 TPP_enzyme_M: Thiamine pyrophosphate enzyme, central domain; InterPro: IPR012000 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor Back     alignment and domain information
>PRK13029 2-oxoacid ferredoxin oxidoreductase; Provisional Back     alignment and domain information
>TIGR03182 PDH_E1_alph_y pyruvate dehydrogenase E1 component, alpha subunit Back     alignment and domain information
>CHL00149 odpA pyruvate dehydrogenase E1 component alpha subunit; Reviewed Back     alignment and domain information
>PRK05899 transketolase; Reviewed Back     alignment and domain information
>PLN02374 pyruvate dehydrogenase (acetyl-transferring) Back     alignment and domain information
>PRK11865 pyruvate ferredoxin oxidoreductase subunit beta; Provisional Back     alignment and domain information
>cd02007 TPP_DXS Thiamine pyrophosphate (TPP) family, DXS subfamily, TPP-binding module; 1-Deoxy-D-xylulose-5-phosphate synthase (DXS) is a regulatory enzyme of the mevalonate-independent pathway involved in terpenoid biosynthesis Back     alignment and domain information
>PRK11864 2-ketoisovalerate ferredoxin oxidoreductase subunit beta; Provisional Back     alignment and domain information
>PRK05444 1-deoxy-D-xylulose-5-phosphate synthase; Provisional Back     alignment and domain information
>PRK12571 1-deoxy-D-xylulose-5-phosphate synthase; Provisional Back     alignment and domain information
>COG1013 PorB Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit [Energy production and conversion] Back     alignment and domain information
>PRK08659 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Validated Back     alignment and domain information
>PRK09627 oorA 2-oxoglutarate-acceptor oxidoreductase subunit OorA; Reviewed Back     alignment and domain information
>PLN02790 transketolase Back     alignment and domain information
>PRK07119 2-ketoisovalerate ferredoxin reductase; Validated Back     alignment and domain information
>TIGR03710 OAFO_sf 2-oxoacid:acceptor oxidoreductase, alpha subunit Back     alignment and domain information
>COG4032 Predicted thiamine-pyrophosphate-binding protein [General function prediction only] Back     alignment and domain information
>PRK12754 transketolase; Reviewed Back     alignment and domain information
>PF00456 Transketolase_N: Transketolase, thiamine diphosphate binding domain; InterPro: IPR005474 Transketolase 2 Back     alignment and domain information
>PTZ00089 transketolase; Provisional Back     alignment and domain information
>TIGR00232 tktlase_bact transketolase, bacterial and yeast Back     alignment and domain information
>PRK12753 transketolase; Reviewed Back     alignment and domain information
>PRK00945 acetyl-CoA decarbonylase/synthase complex subunit epsilon; Provisional Back     alignment and domain information
>PRK08366 vorA 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha; Reviewed Back     alignment and domain information
>PRK12315 1-deoxy-D-xylulose-5-phosphate synthase; Provisional Back     alignment and domain information
>PRK08367 porA pyruvate ferredoxin oxidoreductase subunit alpha; Reviewed Back     alignment and domain information
>PRK09622 porA pyruvate flavodoxin oxidoreductase subunit alpha; Reviewed Back     alignment and domain information
>PF01855 POR_N: Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg; InterPro: IPR002880 This family includes the N-terminal region of the pyruvate ferredoxin oxidoreductase, corresponding to the first two structural domains Back     alignment and domain information
>COG3959 Transketolase, N-terminal subunit [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF00676 E1_dh: Dehydrogenase E1 component; InterPro: IPR001017 This entry includes a number of dehydrogenases all of which use thiamine pyrophosphate as a cofactor and are members of a multienzyme complex Back     alignment and domain information
>cd02017 TPP_E1_EcPDC_like Thiamine pyrophosphate (TPP) family, E1 of E Back     alignment and domain information
>TIGR00315 cdhB CO dehydrogenase/acetyl-CoA synthase complex, epsilon subunit Back     alignment and domain information
>COG1071 AcoA Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Energy production and conversion] Back     alignment and domain information
>PF13292 DXP_synthase_N: 1-deoxy-D-xylulose-5-phosphate synthase; PDB: 2O1X_C 2O1S_B Back     alignment and domain information
>PLN02269 Pyruvate dehydrogenase E1 component subunit alpha Back     alignment and domain information
>COG0021 TktA Transketolase [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00204 dxs 1-deoxy-D-xylulose-5-phosphate synthase Back     alignment and domain information
>PLN02234 1-deoxy-D-xylulose-5-phosphate synthase Back     alignment and domain information
>cd02016 TPP_E1_OGDC_like Thiamine pyrophosphate (TPP) family, E1 of OGDC-like subfamily, TPP-binding module; composed of proteins similar to the E1 component of the 2-oxoglutarate dehydrogenase multienzyme complex (OGDC) Back     alignment and domain information
>cd03377 TPP_PFOR_PNO Thiamine pyrophosphate (TPP family), PFOR_PNO subfamily, TPP-binding module; composed of proteins similar to the single subunit pyruvate ferredoxin oxidoreductase (PFOR) of Desulfovibrio Africanus, present in bacteria and amitochondriate eukaryotes Back     alignment and domain information
>cd02011 TPP_PK Thiamine pyrophosphate (TPP) family, Phosphoketolase (PK) subfamily, TPP-binding module; PK catalyzes the conversion of D-xylulose 5-phosphate and phosphate to acetyl phosphate, D-glyceraldehyde-3-phosphate and H2O Back     alignment and domain information
>TIGR03186 AKGDH_not_PDH alpha-ketoglutarate dehydrogenase Back     alignment and domain information
>COG0674 PorA Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit [Energy production and conversion] Back     alignment and domain information
>TIGR00759 aceE pyruvate dehydrogenase E1 component, homodimeric type Back     alignment and domain information
>PLN02582 1-deoxy-D-xylulose-5-phosphate synthase Back     alignment and domain information
>PRK13012 2-oxoacid dehydrogenase subunit E1; Provisional Back     alignment and domain information
>KOG0523 consensus Transketolase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09405 aceE pyruvate dehydrogenase subunit E1; Reviewed Back     alignment and domain information
>PLN02225 1-deoxy-D-xylulose-5-phosphate synthase Back     alignment and domain information
>PRK09404 sucA 2-oxoglutarate dehydrogenase E1 component; Reviewed Back     alignment and domain information
>COG1154 Dxs Deoxyxylulose-5-phosphate synthase [Coenzyme metabolism / Lipid metabolism] Back     alignment and domain information
>PRK05261 putative phosphoketolase; Provisional Back     alignment and domain information
>TIGR00239 2oxo_dh_E1 2-oxoglutarate dehydrogenase, E1 component Back     alignment and domain information
>TIGR02176 pyruv_ox_red pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric Back     alignment and domain information
>TIGR02176 pyruv_ox_red pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric Back     alignment and domain information
>KOG0225 consensus Pyruvate dehydrogenase E1, alpha subunit [Energy production and conversion] Back     alignment and domain information
>KOG1182 consensus Branched chain alpha-keto acid dehydrogenase complex, alpha subunit [Energy production and conversion] Back     alignment and domain information
>cd07035 TPP_PYR_POX_like Pyrimidine (PYR) binding domain of POX and related proteins Back     alignment and domain information
>cd07039 TPP_PYR_POX Pyrimidine (PYR) binding domain of POX Back     alignment and domain information
>COG1880 CdhB CO dehydrogenase/acetyl-CoA synthase epsilon subunit [Energy production and conversion] Back     alignment and domain information
>PF02776 TPP_enzyme_N: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; InterPro: IPR012001 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor Back     alignment and domain information
>cd07033 TPP_PYR_DXS_TK_like Pyrimidine (PYR) binding domain of 1-deoxy-D-xylulose-5-phosphate synthase (DXS), transketolase (TK), and related proteins Back     alignment and domain information
>cd06586 TPP_enzyme_PYR Pyrimidine (PYR) binding domain of thiamine pyrophosphate (TPP)-dependent enzymes Back     alignment and domain information
>cd07038 TPP_PYR_PDC_IPDC_like Pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC), indolepyruvate decarboxylase (IPDC) and related proteins Back     alignment and domain information
>cd07037 TPP_PYR_MenD Pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate synthase (MenD) and related proteins Back     alignment and domain information
>PF09364 XFP_N: XFP N-terminal domain; InterPro: IPR018970 Phosphoketolases (PK) are key enzymes of the pentose phosphate pathway of heterofermentative and facultative homofermentative lactic acid bacteria and of the D-fructose 6-phosphate shunt of bifidobacteria Back     alignment and domain information
>TIGR03845 sulfopyru_alph sulfopyruvate decarboxylase, alpha subunit Back     alignment and domain information
>smart00861 Transket_pyr Transketolase, pyrimidine binding domain Back     alignment and domain information
>cd02013 TPP_Xsc_like Thiamine pyrophosphate (TPP) family, Xsc-like subfamily, TPP-binding module; composed of proteins similar to Alcaligenes defragrans sulfoacetaldehyde acetyltransferase (Xsc) Back     alignment and domain information
>PLN02470 acetolactate synthase Back     alignment and domain information
>TIGR00232 tktlase_bact transketolase, bacterial and yeast Back     alignment and domain information
>PRK07524 hypothetical protein; Provisional Back     alignment and domain information
>PRK09259 putative oxalyl-CoA decarboxylase; Validated Back     alignment and domain information
>TIGR03254 oxalate_oxc oxalyl-CoA decarboxylase Back     alignment and domain information
>PRK08611 pyruvate oxidase; Provisional Back     alignment and domain information
>PRK06965 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PF02775 TPP_enzyme_C: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; InterPro: IPR011766 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor Back     alignment and domain information
>PRK08322 acetolactate synthase; Reviewed Back     alignment and domain information
>PTZ00182 3-methyl-2-oxobutanate dehydrogenase; Provisional Back     alignment and domain information
>PRK07979 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>COG3957 Phosphoketolase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09107 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>COG0028 IlvB Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>TIGR01504 glyox_carbo_lig glyoxylate carboligase Back     alignment and domain information
>PRK07586 hypothetical protein; Validated Back     alignment and domain information
>PRK07789 acetolactate synthase 1 catalytic subunit; Validated Back     alignment and domain information
>cd02004 TPP_BZL_OCoD_HPCL Thiamine pyrophosphate (TPP) family, BZL_OCoD_HPCL subfamily, TPP-binding module; composed of proteins similar to benzaldehyde lyase (BZL), oxalyl-CoA decarboxylase (OCoD) and 2-hydroxyphytanoyl-CoA lyase (2-HPCL) Back     alignment and domain information
>PRK06725 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PTZ00089 transketolase; Provisional Back     alignment and domain information
>cd02006 TPP_Gcl Thiamine pyrophosphate (TPP) family, Gcl subfamily, TPP-binding module; composed of proteins similar to Escherichia coli glyoxylate carboligase (Gcl) Back     alignment and domain information
>PRK12753 transketolase; Reviewed Back     alignment and domain information
>PRK12754 transketolase; Reviewed Back     alignment and domain information
>PRK08266 hypothetical protein; Provisional Back     alignment and domain information
>PRK06466 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK06276 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>PRK07525 sulfoacetaldehyde acetyltransferase; Validated Back     alignment and domain information
>PLN02790 transketolase Back     alignment and domain information
>PRK05858 hypothetical protein; Provisional Back     alignment and domain information
>TIGR00118 acolac_lg acetolactate synthase, large subunit, biosynthetic type Back     alignment and domain information
>PRK07418 acetolactate synthase 3 catalytic subunit; Reviewed Back     alignment and domain information
>PRK07710 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>PRK08979 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>cd07034 TPP_PYR_PFOR_IOR-alpha_like Pyrimidine (PYR) binding domain of pyruvate ferredoxin oxidoreductase (PFOR), indolepyruvate ferredoxin oxidoreductase alpha subunit (IOR-alpha), and related proteins Back     alignment and domain information
>PF00676 E1_dh: Dehydrogenase E1 component; InterPro: IPR001017 This entry includes a number of dehydrogenases all of which use thiamine pyrophosphate as a cofactor and are members of a multienzyme complex Back     alignment and domain information
>PRK11269 glyoxylate carboligase; Provisional Back     alignment and domain information
>cd02001 TPP_ComE_PpyrDC Thiamine pyrophosphate (TPP) family, ComE and PpyrDC subfamily, TPP-binding module; composed of proteins similar to sulfopyruvate decarboxylase beta subunit (ComE) and phosphonopyruvate decarboxylase (Ppyr decarboxylase) Back     alignment and domain information
>cd02009 TPP_SHCHC_synthase Thiamine pyrophosphate (TPP) family, SHCHC synthase subfamily, TPP-binding module; composed of proteins similar to Escherichia coli 2-succinyl-6-hydroxyl-2,4-cyclohexadiene-1-carboxylic acid (SHCHC) synthase (also called MenD) Back     alignment and domain information
>PRK06456 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>PRK12474 hypothetical protein; Provisional Back     alignment and domain information
>PRK06882 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>TIGR03181 PDH_E1_alph_x pyruvate dehydrogenase E1 component, alpha subunit Back     alignment and domain information
>cd02005 TPP_PDC_IPDC Thiamine pyrophosphate (TPP) family, PDC_IPDC subfamily, TPP-binding module; composed of proteins similar to pyruvate decarboxylase (PDC) and indolepyruvate decarboxylase (IPDC) Back     alignment and domain information
>PF02779 Transket_pyr: Transketolase, pyrimidine binding domain; InterPro: IPR005475 Transketolase 2 Back     alignment and domain information
>PRK06048 acetolactate synthase 3 catalytic subunit; Reviewed Back     alignment and domain information
>TIGR02720 pyruv_oxi_spxB pyruvate oxidase Back     alignment and domain information
>PRK07064 hypothetical protein; Provisional Back     alignment and domain information
>PF02552 CO_dh: CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit; InterPro: IPR003704 Carbon monoxide dehydrogenase (Cdh) from Methanosarcina mazei (Methanosarcina frisia) Go1 is a Ni2+-, Fe2+-, and S2-containing alpha2beta2 heterotetramer [] Back     alignment and domain information
>TIGR03457 sulphoacet_xsc sulfoacetaldehyde acetyltransferase Back     alignment and domain information
>cd02003 TPP_IolD Thiamine pyrophosphate (TPP) family, IolD subfamily, TPP-binding module; composed of proteins similar to Rhizobium leguminosarum bv Back     alignment and domain information
>PRK07282 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>TIGR02418 acolac_catab acetolactate synthase, catabolic Back     alignment and domain information
>PRK06457 pyruvate dehydrogenase; Provisional Back     alignment and domain information
>PRK06112 acetolactate synthase catalytic subunit; Validated Back     alignment and domain information
>cd02010 TPP_ALS Thiamine pyrophosphate (TPP) family, Acetolactate synthase (ALS) subfamily, TPP-binding module; composed of proteins similar to Klebsiella pneumoniae ALS, a catabolic enzyme required for butanediol fermentation Back     alignment and domain information
>PRK08617 acetolactate synthase; Reviewed Back     alignment and domain information
>PRK08978 acetolactate synthase 2 catalytic subunit; Reviewed Back     alignment and domain information
>PRK11892 pyruvate dehydrogenase subunit beta; Provisional Back     alignment and domain information
>PRK08527 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK08155 acetolactate synthase catalytic subunit; Validated Back     alignment and domain information
>cd02015 TPP_AHAS Thiamine pyrophosphate (TPP) family, Acetohydroxyacid synthase (AHAS) subfamily, TPP-binding module; composed of proteins similar to the large catalytic subunit of AHAS Back     alignment and domain information
>PRK08327 acetolactate synthase catalytic subunit; Validated Back     alignment and domain information
>cd02008 TPP_IOR_alpha Thiamine pyrophosphate (TPP) family, IOR-alpha subfamily, TPP-binding module; composed of proteins similar to indolepyruvate ferredoxin oxidoreductase (IOR) alpha subunit Back     alignment and domain information
>PRK08199 thiamine pyrophosphate protein; Validated Back     alignment and domain information
>CHL00099 ilvB acetohydroxyacid synthase large subunit Back     alignment and domain information
>TIGR00173 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase Back     alignment and domain information
>cd07036 TPP_PYR_E1-PDHc-beta_like Pyrimidine (PYR) binding domain of the beta subunits of the E1 components of human pyruvate dehydrogenase complex (E1- PDHc) and related proteins Back     alignment and domain information
>PRK12571 1-deoxy-D-xylulose-5-phosphate synthase; Provisional Back     alignment and domain information
>PRK11866 2-oxoacid ferredoxin oxidoreductase subunit beta; Provisional Back     alignment and domain information
>cd00568 TPP_enzymes Thiamine pyrophosphate (TPP) enzyme family, TPP-binding module; found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor Back     alignment and domain information
>PRK08273 thiamine pyrophosphate protein; Provisional Back     alignment and domain information
>PRK06154 hypothetical protein; Provisional Back     alignment and domain information
>PRK06546 pyruvate dehydrogenase; Provisional Back     alignment and domain information
>TIGR00204 dxs 1-deoxy-D-xylulose-5-phosphate synthase Back     alignment and domain information
>PRK07092 benzoylformate decarboxylase; Reviewed Back     alignment and domain information
>cd02000 TPP_E1_PDC_ADC_BCADC Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; composed of proteins similar to the E1 components of the human pyruvate dehydrogenase complex (PDC), the acetoin dehydrogenase complex (ADC) and the branched chain alpha-keto acid dehydrogenase/2-oxoisovalerate dehydrogenase complex (BCADC) Back     alignment and domain information
>PRK05899 transketolase; Reviewed Back     alignment and domain information
>TIGR03297 Ppyr-DeCO2ase phosphonopyruvate decarboxylase Back     alignment and domain information
>cd07033 TPP_PYR_DXS_TK_like Pyrimidine (PYR) binding domain of 1-deoxy-D-xylulose-5-phosphate synthase (DXS), transketolase (TK), and related proteins Back     alignment and domain information
>COG1071 AcoA Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Energy production and conversion] Back     alignment and domain information
>PRK05778 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Validated Back     alignment and domain information
>cd02002 TPP_BFDC Thiamine pyrophosphate (TPP) family, BFDC subfamily, TPP-binding module; composed of proteins similar to Pseudomonas putida benzoylformate decarboxylase (BFDC) Back     alignment and domain information
>cd07036 TPP_PYR_E1-PDHc-beta_like Pyrimidine (PYR) binding domain of the beta subunits of the E1 components of human pyruvate dehydrogenase complex (E1- PDHc) and related proteins Back     alignment and domain information
>PRK12315 1-deoxy-D-xylulose-5-phosphate synthase; Provisional Back     alignment and domain information
>PRK05444 1-deoxy-D-xylulose-5-phosphate synthase; Provisional Back     alignment and domain information
>TIGR03182 PDH_E1_alph_y pyruvate dehydrogenase E1 component, alpha subunit Back     alignment and domain information
>cd03375 TPP_OGFOR Thiamine pyrophosphate (TPP family), 2-oxoglutarate ferredoxin oxidoreductase (OGFOR) subfamily, TPP-binding module; OGFOR catalyzes the oxidative decarboxylation of 2-oxo-acids, with ferredoxin acting as an electron acceptor Back     alignment and domain information
>cd02014 TPP_POX Thiamine pyrophosphate (TPP) family, Pyruvate oxidase (POX) subfamily, TPP-binding module; composed of proteins similar to Lactobacillus plantarum POX, which plays a key role in controlling acetate production under aerobic conditions Back     alignment and domain information
>PRK06163 hypothetical protein; Provisional Back     alignment and domain information
>TIGR03394 indol_phenyl_DC indolepyruvate/phenylpyruvate decarboxylase, Azospirillum family Back     alignment and domain information
>cd03372 TPP_ComE Thiamine pyrophosphate (TPP) family, ComE subfamily, TPP-binding module; composed of proteins similar to Methanococcus jannaschii sulfopyruvate decarboxylase beta subunit (ComE) Back     alignment and domain information
>TIGR03846 sulfopy_beta sulfopyruvate decarboxylase, beta subunit Back     alignment and domain information
>PRK12270 kgd alpha-ketoglutarate decarboxylase; Reviewed Back     alignment and domain information
>PRK09124 pyruvate dehydrogenase; Provisional Back     alignment and domain information
>cd03371 TPP_PpyrDC Thiamine pyrophosphate (TPP) family, PpyrDC subfamily, TPP-binding module; composed of proteins similar to phosphonopyruvate decarboxylase (PpyrDC) proteins Back     alignment and domain information
>COG3958 Transketolase, C-terminal subunit [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09628 oorB 2-oxoglutarate-acceptor oxidoreductase subunit OorB; Reviewed Back     alignment and domain information
>CHL00144 odpB pyruvate dehydrogenase E1 component beta subunit; Validated Back     alignment and domain information
>PLN02582 1-deoxy-D-xylulose-5-phosphate synthase Back     alignment and domain information
>PRK13012 2-oxoacid dehydrogenase subunit E1; Provisional Back     alignment and domain information
>PLN02374 pyruvate dehydrogenase (acetyl-transferring) Back     alignment and domain information
>PRK11869 2-oxoacid ferredoxin oxidoreductase subunit beta; Provisional Back     alignment and domain information
>CHL00149 odpA pyruvate dehydrogenase E1 component alpha subunit; Reviewed Back     alignment and domain information
>PLN02683 pyruvate dehydrogenase E1 component subunit beta Back     alignment and domain information
>PLN02573 pyruvate decarboxylase Back     alignment and domain information
>PLN02225 1-deoxy-D-xylulose-5-phosphate synthase Back     alignment and domain information
>cd02018 TPP_PFOR Thiamine pyrophosphate (TPP family), Pyruvate ferredoxin/flavodoxin oxidoreductase (PFOR) subfamily, TPP-binding module; PFOR catalyzes the oxidative decarboxylation of pyruvate to form acetyl-CoA, a crucial step in many metabolic pathways Back     alignment and domain information
>TIGR03336 IOR_alpha indolepyruvate ferredoxin oxidoreductase, alpha subunit Back     alignment and domain information
>PF02779 Transket_pyr: Transketolase, pyrimidine binding domain; InterPro: IPR005475 Transketolase 2 Back     alignment and domain information
>PRK07449 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase; Validated Back     alignment and domain information
>COG2609 AceE Pyruvate dehydrogenase complex, dehydrogenase (E1) component [Energy production and conversion] Back     alignment and domain information
>cd03376 TPP_PFOR_porB_like Thiamine pyrophosphate (TPP family), PFOR porB-like subfamily, TPP-binding module; composed of proteins similar to the beta subunit (porB) of the Helicobacter pylori four-subunit pyruvate ferredoxin oxidoreductase (PFOR), which are also found in archaea and some hyperthermophilic bacteria Back     alignment and domain information
>TIGR02177 PorB_KorB 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family Back     alignment and domain information
>COG1029 FwdB Formylmethanofuran dehydrogenase subunit B [Energy production and conversion] Back     alignment and domain information
>cd01460 vWA_midasin VWA_Midasin: Midasin is a member of the AAA ATPase family Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query585
2vbi_A566 Holostructure Of Pyruvate Decarboxylase From Acetob 1e-114
2wva_A568 Structural Insights Into The Pre-Reaction State Of 1e-113
3oe1_A568 Pyruvate Decarboxylase Variant Glu473asp From Z. Mo 1e-113
1zpd_A568 Pyruvate Decarboxylase From Zymomonas Mobilis Lengt 1e-110
2vk8_A563 Crystal Structure Of The Saccharomyces Cerevisiae P 4e-66
1qpb_A563 Pyruvate Decarboyxlase From Yeast (Form B) Complexe 4e-66
2w93_A563 Crystal Structure Of The Saccharomyces Cerevisiae P 7e-66
2vjy_A563 Pyruvate Decarboxylase From Kluyveromyces Lactis In 8e-66
2vk1_A563 Crystal Structure Of The Saccharomyces Cerevisiae P 2e-65
1pyd_A556 Catalytic Centers In The Thiamin Diphosphate Depend 2e-64
1pvd_A555 Crystal Structure Of The Thiamin Diphosphate Depend 3e-64
2vbf_A570 The Holostructure Of The Branched-Chain Keto Acid D 2e-63
1ovm_A552 Crystal Structure Of Indolepyruvate Decarboxylase F 8e-61
2nxw_A565 Crystal Structure Of Phenylpyruvate Decarboxylase O 3e-27
3fzn_A534 Intermediate Analogue In Benzoylformate Decarboxyla 5e-08
1mcz_A528 Benzoylformate Decarboxylase From Pseudomonas Putid 5e-08
1pi3_A528 E28q Mutant Benzoylformate Decarboxylase From Pseud 5e-08
3f6b_X525 Crystal Structure Of Benzoylformate Decarboxylase I 5e-08
2v3w_A528 Crystal Structure Of The Benzoylformate Decarboxyla 6e-08
1yno_A527 High Resolution Structure Of Benzoylformate Decarbo 6e-08
2fwn_A528 Phosphorylation Of An Active Site Serine In A Thdp- 6e-08
2fn3_A528 High Resolution Structure Of S26a Mutant Of Benzoyl 8e-08
1po7_A528 High Resolution Structure Of E28a Mutant Benzoylfor 9e-08
3e9y_A584 Arabidopsis Thaliana Acetohydroxyacid Synthase In C 6e-07
1ybh_A590 Crystal Structure Of Arabidopsis Thaliana Acetohydr 9e-07
1upb_A573 Carboxyethylarginine Synthase From Streptomyces Cla 7e-06
1pow_A585 The Refined Structures Of A Stabilized Mutant And O 1e-05
2ez4_A603 Pyruvate Oxidase Variant F479w Length = 603 2e-05
4fee_A603 High-Resolution Structure Of Pyruvate Oxidase In Co 2e-05
1y9d_A603 Pyruvate Oxidase Variant V265a From Lactobacillus P 2e-05
1upa_A573 Carboxyethylarginine Synthase From Streptomyces Cla 2e-05
1n0h_A677 Crystal Structure Of Yeast Acetohydroxyacid Synthas 3e-05
1jsc_A630 Crystal Structure Of The Catalytic Subunit Of Yeast 3e-05
1pox_A585 The Refined Structures Of A Stabilized Mutant And O 4e-04
>pdb|2VBI|A Chain A, Holostructure Of Pyruvate Decarboxylase From Acetobacter Pasteurianus Length = 566 Back     alignment and structure 
Iteration: 1

 Score =  407 bits (1047), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 224/557 (40%), Positives = 315/557 (56%), Gaps = 28/557 (5%)
Query: 45  TLGRHLARRLVQIGATDVFSVPGDFNLTLLDHLIAEPGLNLIGCCNELNAGYAADGYARS 104
           T+G +LA RLVQIG    F+V GD+NL LLD L+    +  I CCNELN G++A+GYARS
Sbjct: 4   TVGMYLAERLVQIGLKHHFAVAGDYNLVLLDQLLLNKDMKQIYCCNELNCGFSAEGYARS 63
Query: 105 RGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQ 164
            G  A VVTF+VG +S +NA+ GAY+ENLP+I I G PNSND GT  ILHHTIG  D+S 
Sbjct: 64  NGAAAAVVTFSVGAISAMNALGGAYAENLPVILISGAPNSNDQGTGHILHHTIGKTDYSY 123
Query: 165 ELRCFQTVTCYQAVVNNLEDAHELIDTAVSTALKESKPVYISVACNLPAIPHPTFSREPV 224
           +L   + VTC    + +   A   ID  + TAL+E KP Y+ +ACN+ +   P     PV
Sbjct: 124 QLEMARQVTCAAESITDAHSAPAKIDHVIRTALRERKPAYLDIACNIAS--EPCVRPGPV 181
Query: 225 PFSLSPKLSNEMGLXXXXXXXXXFLNKAVKPVLVAGPKMRVAKACNAFVELADACGYAVA 284
              LS    +   L          L K+  PV++ G K+R A A  A   LAD    AV 
Sbjct: 182 SSLLSEPEIDHTSLKAAVDATVALLEKSASPVMLLGSKLRAANALAATETLADKLQCAVT 241
Query: 285 VMPSAKGLVPEHHPHFIGTYWGAVS---------------------TAFFSVGYSLLLKK 323
           +M +AKG  PE H  F G YWG VS                       + +VG+S   K 
Sbjct: 242 IMAAAKGFFPEDHAGFRGLYWGEVSNPGVQELVETSDALLCIAPVFNDYSTVGWSAWPKG 301
Query: 324 EKAVILQPDRVVIANGPAFGCVLMKDFLKALSKRLKSNTTAYENYHRIYVPEGQPPKCEP 383
              ++ +PDRV + +G A+    ++ FL+AL+++  +   + +   +  VP         
Sbjct: 302 PNVILAEPDRVTV-DGRAYDGFTLRAFLQALAEKAPARPASAQ---KSSVPTCSLTATSD 357
Query: 384 KEPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGA 443
           +  L  + + +HI  +L+S T ++AETGDSWFN  ++ LP+G   E +MQ+G IGWSV +
Sbjct: 358 EAGLTNDEIVRHINALLTSNTTLVAETGDSWFNAMRMTLPRGARVELEMQWGHIGWSVPS 417
Query: 444 TLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPY 503
             G A    +++ +  +GDGSFQ+TAQ+V+ M+R     IIFLINN GY IE+ IHDGPY
Sbjct: 418 AFGNAMGSQDRQHVVMVGDGSFQLTAQEVAQMVRYELPVIIFLINNRGYVIEIAIHDGPY 477
Query: 504 NVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDDT 563
           N IKNW+Y GL++  + GEG     K    +EL EAI  A    +     IE  + + D 
Sbjct: 478 NYIKNWDYAGLMEVFNAGEGHGLGLKATTPKELTEAIARAKANTRGP-TLIECQIDRTDC 536
Query: 564 SKELLEWGSRVSAANSR 580
           +  L++WG +V++ N+R
Sbjct: 537 TDMLVQWGRKVASTNAR 553
>pdb|2WVA|A Chain A, Structural Insights Into The Pre-Reaction State Of Pyruvate Decarboxylase From Zymomonas Mobilis Length = 568 Back     alignment and structure
>pdb|3OE1|A Chain A, Pyruvate Decarboxylase Variant Glu473asp From Z. Mobilis In Complex With Reaction Intermediate 2-Lactyl-Thdp Length = 568 Back     alignment and structure
>pdb|1ZPD|A Chain A, Pyruvate Decarboxylase From Zymomonas Mobilis Length = 568 Back     alignment and structure
>pdb|2VK8|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Pyruvate Decarboxylase Variant E477q In Complex With Its Substrate Length = 563 Back     alignment and structure
>pdb|1QPB|A Chain A, Pyruvate Decarboyxlase From Yeast (Form B) Complexed With Pyruvamide Length = 563 Back     alignment and structure
>pdb|2W93|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Pyruvate Decarboxylase Variant E477q In Complex With The Surrogate Pyruvamide Length = 563 Back     alignment and structure
>pdb|2VJY|A Chain A, Pyruvate Decarboxylase From Kluyveromyces Lactis In Complex With The Substrate Analogue Methyl Acetylphosphonate Length = 563 Back     alignment and structure
>pdb|2VK1|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Pyruvate Decarboxylase Variant D28a In Complex With Its Substrate Length = 563 Back     alignment and structure
>pdb|1PYD|A Chain A, Catalytic Centers In The Thiamin Diphosphate Dependent Enzyme Pyruvate Decarboxylase At 2.4 Angstroms Resolution Length = 556 Back     alignment and structure
>pdb|1PVD|A Chain A, Crystal Structure Of The Thiamin Diphosphate Dependent Enzyme Pyruvate Decarboxylase From The Yeast Saccharomyces Cerevisiae At 2.3 Angstroms Resolution Length = 555 Back     alignment and structure
>pdb|2VBF|A Chain A, The Holostructure Of The Branched-Chain Keto Acid Decarboxylase (Kdca) From Lactococcus Lactis Length = 570 Back     alignment and structure
>pdb|1OVM|A Chain A, Crystal Structure Of Indolepyruvate Decarboxylase From Enterobacter Cloacae Length = 552 Back     alignment and structure
>pdb|2NXW|A Chain A, Crystal Structure Of Phenylpyruvate Decarboxylase Of Azospirillum Brasilense Length = 565 Back     alignment and structure
>pdb|3FZN|A Chain A, Intermediate Analogue In Benzoylformate Decarboxylase Length = 534 Back     alignment and structure
>pdb|1MCZ|A Chain A, Benzoylformate Decarboxylase From Pseudomonas Putida Complexed With An Inhibitor, R-Mandelate Length = 528 Back     alignment and structure
>pdb|1PI3|A Chain A, E28q Mutant Benzoylformate Decarboxylase From Pseudomonas Putida Length = 528 Back     alignment and structure
>pdb|3F6B|X Chain X, Crystal Structure Of Benzoylformate Decarboxylase In Complex With The Pyridyl Inhibitor Paa Length = 525 Back     alignment and structure
>pdb|2V3W|A Chain A, Crystal Structure Of The Benzoylformate Decarboxylase Variant L461a From Pseudomonas Putida Length = 528 Back     alignment and structure
>pdb|1YNO|A Chain A, High Resolution Structure Of Benzoylformate Decarboxylase From Pseudomonas Putida Complexed With Thiamine Thiazolone Diphosphate Length = 527 Back     alignment and structure
>pdb|2FWN|A Chain A, Phosphorylation Of An Active Site Serine In A Thdp- Dependent Enzyme By Phosphonate Inactivation Length = 528 Back     alignment and structure
>pdb|2FN3|A Chain A, High Resolution Structure Of S26a Mutant Of Benzoylformate Decarboxylase From Pseudomonas Putida Complexed With Thiamine Thiazolone Diphosphate Length = 528 Back     alignment and structure
>pdb|1PO7|A Chain A, High Resolution Structure Of E28a Mutant Benzoylformate Decarboxylase From Pseudomonas Putida Length = 528 Back     alignment and structure
>pdb|3E9Y|A Chain A, Arabidopsis Thaliana Acetohydroxyacid Synthase In Complex With Monosulfuron Length = 584 Back     alignment and structure
>pdb|1YBH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Acetohydroxyacid Synthase In Complex With A Sulfonylurea Herbicide Chlorimuron Ethyl Length = 590 Back     alignment and structure
>pdb|1UPB|A Chain A, Carboxyethylarginine Synthase From Streptomyces Clavuligerus Length = 573 Back     alignment and structure
>pdb|1POW|A Chain A, The Refined Structures Of A Stabilized Mutant And Of Wild-Type Pyruvate Oxidase From Lactobacillus Plantarum Length = 585 Back     alignment and structure
>pdb|2EZ4|A Chain A, Pyruvate Oxidase Variant F479w Length = 603 Back     alignment and structure
>pdb|4FEE|A Chain A, High-Resolution Structure Of Pyruvate Oxidase In Complex With Reaction Intermediate 2-Hydroxyethyl-Thiamin Diphosphate Carbanion-Enamine, Crystal B Length = 603 Back     alignment and structure
>pdb|1Y9D|A Chain A, Pyruvate Oxidase Variant V265a From Lactobacillus Plantarum Length = 603 Back     alignment and structure
>pdb|1UPA|A Chain A, Carboxyethylarginine Synthase From Streptomyces Clavuligerus (semet Structure) Length = 573 Back     alignment and structure
>pdb|1N0H|A Chain A, Crystal Structure Of Yeast Acetohydroxyacid Synthase In Complex With A Sulfonylurea Herbicide, Chlorimuron Ethyl Length = 677 Back     alignment and structure
>pdb|1JSC|A Chain A, Crystal Structure Of The Catalytic Subunit Of Yeast Acetohydroxyacid Synthase: A Target For Herbicidal Inhibitors Length = 630 Back     alignment and structure
>pdb|1POX|A Chain A, The Refined Structures Of A Stabilized Mutant And Of Wild-Type Pyruvate Oxidase From Lactobacillus Plantarum Length = 585 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query585
2vbi_A566 Pyruvate decarboxylase; thiamine pyrophosphate, ly 0.0
2wvg_A568 PDC, pyruvate decarboxylase; thiamine diphosphate, 0.0
2vk8_A563 Pyruvate decarboxylase isozyme 1; asymmetric activ 0.0
1ovm_A552 Indole-3-pyruvate decarboxylase; thiamine diphosph 0.0
2vbf_A570 Branched-chain alpha-ketoacid decarboxylase; KDCA, 0.0
2nxw_A565 Phenyl-3-pyruvate decarboxylase; thiamine pyrophos 1e-155
3eya_A549 Pyruvate dehydrogenase [cytochrome]; pyruvate oxid 8e-33
4feg_A603 Pyruvate oxidase; carbanion, structure activity re 2e-32
2x7j_A604 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene - 2e-30
1v5e_A590 Pyruvate oxidase; oxidoreductase, flavoprotein; HE 7e-30
3lq1_A578 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1e-27
2q28_A564 Oxalyl-COA decarboxylase; lyase, oxalate degradati 6e-25
1q6z_A528 BFD, BFDC, benzoylformate decarboxylase; lyase, ca 4e-23
1ozh_A566 ALS, acetolactate synthase, catabolic; acetohydrox 2e-22
3hww_A556 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 4e-22
2iht_A573 Carboxyethylarginine synthase; thiamin diphosphate 1e-20
2pgn_A589 Cyclohexane-1,2-dione hydrolase (CDH); three alpha 8e-17
2c31_A568 Oxalyl-COA decarboxylase; oxalate, thiamin diphosp 2e-15
2c31_A568 Oxalyl-COA decarboxylase; oxalate, thiamin diphosp 1e-09
2pan_A616 Glyoxylate carboligase; thiamin-diphosphate (THDP) 5e-12
2pan_A616 Glyoxylate carboligase; thiamin-diphosphate (THDP) 7e-06
1t9b_A677 Acetolactate synthase, mitochondrial; acetohydroxy 6e-07
1t9b_A677 Acetolactate synthase, mitochondrial; acetohydroxy 1e-05
1ybh_A590 Acetolactate synthase, chloroplast; acetohydroxyac 3e-06
1ybh_A590 Acetolactate synthase, chloroplast; acetohydroxyac 5e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-05
2uz1_A563 Benzaldehyde lyase; thiamine diphosphate, thiamine 2e-05
2uz1_A563 Benzaldehyde lyase; thiamine diphosphate, thiamine 3e-05
2uz1_A563 Benzaldehyde lyase; thiamine diphosphate, thiamine 9e-05
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus} Length = 566 Back     alignment and structure
 Score =  746 bits (1928), Expect = 0.0
 Identities = 229/562 (40%), Positives = 320/562 (56%), Gaps = 28/562 (4%)

Query: 45  TLGRHLARRLVQIGATDVFSVPGDFNLTLLDHLIAEPGLNLIGCCNELNAGYAADGYARS 104
           T+G +LA RLVQIG    F+V GD+NL LLD L+    +  I CCNELN G++A+GYARS
Sbjct: 4   TVGMYLAERLVQIGLKHHFAVAGDYNLVLLDQLLLNKDMKQIYCCNELNCGFSAEGYARS 63

Query: 105 RGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQ 164
            G  A VVTF+VG +S +NA+ GAY+ENLP+I I G PNSND GT  ILHHTIG  D+S 
Sbjct: 64  NGAAAAVVTFSVGAISAMNALGGAYAENLPVILISGAPNSNDQGTGHILHHTIGKTDYSY 123

Query: 165 ELRCFQTVTCYQAVVNNLEDAHELIDTAVSTALKESKPVYISVACNLPAIPHPTFSREPV 224
           +L   + VTC    + +   A   ID  + TAL+E KP Y+ +ACN+ +   P     PV
Sbjct: 124 QLEMARQVTCAAESITDAHSAPAKIDHVIRTALRERKPAYLDIACNIAS--EPCVRPGPV 181

Query: 225 PFSLSPKLSNEMGLEAAVEAAAEFLNKAVKPVLVAGPKMRVAKACNAFVELADACGYAVA 284
              LS    +   L+AAV+A    L K+  PV++ G K+R A A  A   LAD    AV 
Sbjct: 182 SSLLSEPEIDHTSLKAAVDATVALLEKSASPVMLLGSKLRAANALAATETLADKLQCAVT 241

Query: 285 VMPSAKGLVPEHHPHFIGTYWGAVST-----------------AFFS----VGYSLLLKK 323
           +M +AKG  PE H  F G YWG VS                    F+    VG+S   K 
Sbjct: 242 IMAAAKGFFPEDHAGFRGLYWGEVSNPGVQELVETSDALLCIAPVFNDYSTVGWSAWPKG 301

Query: 324 EKAVILQPDRVVIANGPAFGCVLMKDFLKALSKRLKSNTTAYENYHRIYVPEGQPPKCEP 383
              ++ +PDRV + +G A+    ++ FL+AL+++  +   + +   +  VP         
Sbjct: 302 PNVILAEPDRVTV-DGRAYDGFTLRAFLQALAEKAPARPASAQ---KSSVPTCSLTATSD 357

Query: 384 KEPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGA 443
           +  L  + + +HI  +L+S T ++AETGDSWFN  ++ LP+G   E +MQ+G IGWSV +
Sbjct: 358 EAGLTNDEIVRHINALLTSNTTLVAETGDSWFNAMRMTLPRGARVELEMQWGHIGWSVPS 417

Query: 444 TLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPY 503
             G A    +++ +  +GDGSFQ+TAQ+V+ M+R     IIFLINN GY IE+ IHDGPY
Sbjct: 418 AFGNAMGSQDRQHVVMVGDGSFQLTAQEVAQMVRYELPVIIFLINNRGYVIEIAIHDGPY 477

Query: 504 NVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDDT 563
           N IKNW+Y GL++  + GEG     K    +EL EAI  A          IE  + + D 
Sbjct: 478 NYIKNWDYAGLMEVFNAGEGHGLGLKATTPKELTEAIARAKA-NTRGPTLIECQIDRTDC 536

Query: 564 SKELLEWGSRVSAANSRPPNPQ 585
           +  L++WG +V++ N+R     
Sbjct: 537 TDMLVQWGRKVASTNARKTTLA 558
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A* Length = 568 Back     alignment and structure
>2vk8_A Pyruvate decarboxylase isozyme 1; asymmetric active sites, phenylalanine catabolism, tryptophan catabolism, thiamine pyrophosphate; HET: TPP; 1.42A {Saccharomyces cerevisiae} PDB: 1qpb_A* 2vk1_A* 2w93_A* 1pyd_A* 1pvd_A* 2vk4_A* 2vjy_A* 2g1i_A* Length = 563 Back     alignment and structure
>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 Length = 552 Back     alignment and structure
>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A* Length = 570 Back     alignment and structure
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A* Length = 565 Back     alignment and structure
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A* Length = 549 Back     alignment and structure
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A* Length = 603 Back     alignment and structure
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis} Length = 604 Back     alignment and structure
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A* Length = 590 Back     alignment and structure
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes} Length = 578 Back     alignment and structure
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A* Length = 564 Back     alignment and structure
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X* Length = 528 Back     alignment and structure
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A* Length = 566 Back     alignment and structure
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A* Length = 556 Back     alignment and structure
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A* Length = 573 Back     alignment and structure
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A* Length = 589 Back     alignment and structure
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A* Length = 568 Back     alignment and structure
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A* Length = 568 Back     alignment and structure
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli} Length = 616 Back     alignment and structure
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli} Length = 616 Back     alignment and structure
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A* Length = 677 Back     alignment and structure
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A* Length = 677 Back     alignment and structure
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A* Length = 590 Back     alignment and structure
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A* Length = 590 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A* Length = 563 Back     alignment and structure
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A* Length = 563 Back     alignment and structure
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A* Length = 563 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query585
2wvg_A568 PDC, pyruvate decarboxylase; thiamine diphosphate, 100.0
2vbi_A566 Pyruvate decarboxylase; thiamine pyrophosphate, ly 100.0
2vk8_A563 Pyruvate decarboxylase isozyme 1; asymmetric activ 100.0
1ovm_A552 Indole-3-pyruvate decarboxylase; thiamine diphosph 100.0
2vbf_A570 Branched-chain alpha-ketoacid decarboxylase; KDCA, 100.0
2nxw_A565 Phenyl-3-pyruvate decarboxylase; thiamine pyrophos 100.0
3eya_A549 Pyruvate dehydrogenase [cytochrome]; pyruvate oxid 100.0
1ozh_A566 ALS, acetolactate synthase, catabolic; acetohydrox 100.0
4feg_A603 Pyruvate oxidase; carbanion, structure activity re 100.0
1t9b_A677 Acetolactate synthase, mitochondrial; acetohydroxy 100.0
1ybh_A590 Acetolactate synthase, chloroplast; acetohydroxyac 100.0
2pgn_A589 Cyclohexane-1,2-dione hydrolase (CDH); three alpha 100.0
2x7j_A604 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene - 100.0
1q6z_A528 BFD, BFDC, benzoylformate decarboxylase; lyase, ca 100.0
2uz1_A563 Benzaldehyde lyase; thiamine diphosphate, thiamine 100.0
1v5e_A590 Pyruvate oxidase; oxidoreductase, flavoprotein; HE 100.0
3lq1_A578 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 100.0
2iht_A573 Carboxyethylarginine synthase; thiamin diphosphate 100.0
2pan_A616 Glyoxylate carboligase; thiamin-diphosphate (THDP) 100.0
2c31_A568 Oxalyl-COA decarboxylase; oxalate, thiamin diphosp 100.0
2q28_A564 Oxalyl-COA decarboxylase; lyase, oxalate degradati 100.0
3hww_A556 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 100.0
2c42_A 1231 Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, 99.78
1w85_A368 Pyruvate dehydrogenase E1 component, alpha subunit 99.64
2o1x_A 629 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, 99.62
2bfd_A400 2-oxoisovalerate dehydrogenase alpha subunit; oxid 99.62
1umd_A367 E1-alpha, 2-OXO acid dehydrogenase alpha subunit; 99.62
3l84_A 632 Transketolase; TKT, structural genomics, center fo 99.61
1yd7_A395 2-keto acid:ferredoxin oxidoreductase subunit alph 99.61
3uk1_A 711 Transketolase; structural genomics, seattle struct 99.6
1qs0_A407 2-oxoisovalerate dehydrogenase alpha-subunit; hete 99.6
3kom_A 663 Transketolase; rossmann fold, csgid, transferase, 99.58
3m49_A 690 Transketolase; alpha-beta-alpha sandwich, csgid, t 99.58
3mos_A 616 Transketolase, TK; thiamin diphosphate TPP THDP en 99.57
2o1s_A 621 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thia 99.57
2e6k_A 651 Transketolase; structural genomics, NPPSFA, nation 99.57
2r8o_A 669 Transketolase 1, TK 1; reaction intermediate, calc 99.56
1itz_A 675 Transketolase; calvin cycle, cofactor, thiamine py 99.55
1gpu_A 680 Transketolase; transferase(ketone residues); HET: 99.54
2ozl_A365 PDHE1-A type I, pyruvate dehydrogenase E1 componen 99.53
1r9j_A 673 Transketolase; domains, EACH of the alpha/beta typ 99.48
3cf4_G170 Acetyl-COA decarboxylase/synthase epsilon subunit; 99.43
3rim_A 700 Transketolase, TK; TPP, transferase; HET: TPP; 2.4 99.24
2yic_A 868 2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.9 99.0
1ytl_A174 Acetyl-COA decarboxylase/synthase complex epsilon 98.89
2qtc_A 886 Pyruvate dehydrogenase E1 component; thiamin dipho 98.88
2xt6_A 1113 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET 98.86
2jgd_A 933 2-oxoglutarate dehydrogenase E1 component; flavopr 98.76
2c42_A 1231 Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, 98.24
3ahc_A 845 Phosphoketolase, xylulose 5-phosphate/fructose 6-p 97.8
2bfd_B342 2-oxoisovalerate dehydrogenase beta subunit; oxido 94.72
3mos_A616 Transketolase, TK; thiamin diphosphate TPP THDP en 94.24
1ybh_A 590 Acetolactate synthase, chloroplast; acetohydroxyac 93.98
2pan_A 616 Glyoxylate carboligase; thiamin-diphosphate (THDP) 93.94
2ozl_B341 PDHE1-B, pyruvate dehydrogenase E1 component subun 93.78
2uz1_A 563 Benzaldehyde lyase; thiamine diphosphate, thiamine 93.74
1w85_B324 Pyruvate dehydrogenase E1 component, beta subunit; 93.63
1qs0_B338 2-oxoisovalerate dehydrogenase beta-subunit; heter 93.38
1ozh_A 566 ALS, acetolactate synthase, catabolic; acetohydrox 93.16
2iht_A 573 Carboxyethylarginine synthase; thiamin diphosphate 92.95
2r8o_A669 Transketolase 1, TK 1; reaction intermediate, calc 92.91
1t9b_A 677 Acetolactate synthase, mitochondrial; acetohydroxy 92.68
1umd_B324 E1-beta, 2-OXO acid dehydrogenase beta subunit; al 92.61
3l84_A632 Transketolase; TKT, structural genomics, center fo 92.6
1v5e_A 590 Pyruvate oxidase; oxidoreductase, flavoprotein; HE 92.29
2o1s_A621 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thia 91.86
1ik6_A369 Pyruvate dehydrogenase; E1BETA, tetramer, GXXXG, o 91.79
2e6k_A651 Transketolase; structural genomics, NPPSFA, nation 91.68
3kom_A663 Transketolase; rossmann fold, csgid, transferase, 91.51
2q28_A 564 Oxalyl-COA decarboxylase; lyase, oxalate degradati 91.34
2pgn_A 589 Cyclohexane-1,2-dione hydrolase (CDH); three alpha 91.23
3eya_A 549 Pyruvate dehydrogenase [cytochrome]; pyruvate oxid 91.21
2c31_A 568 Oxalyl-COA decarboxylase; oxalate, thiamin diphosp 90.93
1q6z_A 528 BFD, BFDC, benzoylformate decarboxylase; lyase, ca 90.78
2o1x_A629 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, 90.71
2x7j_A 604 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene - 90.61
1w85_A368 Pyruvate dehydrogenase E1 component, alpha subunit 90.59
4feg_A 603 Pyruvate oxidase; carbanion, structure activity re 90.28
2nxw_A 565 Phenyl-3-pyruvate decarboxylase; thiamine pyrophos 90.13
3uk1_A711 Transketolase; structural genomics, seattle struct 89.88
1r9j_A673 Transketolase; domains, EACH of the alpha/beta typ 89.79
1itz_A675 Transketolase; calvin cycle, cofactor, thiamine py 89.77
2vbi_A 566 Pyruvate decarboxylase; thiamine pyrophosphate, ly 89.71
3hww_A 556 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 89.6
1gpu_A680 Transketolase; transferase(ketone residues); HET: 88.83
2vk8_A 563 Pyruvate decarboxylase isozyme 1; asymmetric activ 88.82
2wvg_A 568 PDC, pyruvate decarboxylase; thiamine diphosphate, 87.74
3lq1_A 578 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 87.57
2bfd_A400 2-oxoisovalerate dehydrogenase alpha subunit; oxid 86.73
3m49_A690 Transketolase; alpha-beta-alpha sandwich, csgid, t 85.9
1qs0_A407 2-oxoisovalerate dehydrogenase alpha-subunit; hete 85.72
1ovm_A 552 Indole-3-pyruvate decarboxylase; thiamine diphosph 84.47
2ozl_A365 PDHE1-A type I, pyruvate dehydrogenase E1 componen 84.16
1ik6_A 369 Pyruvate dehydrogenase; E1BETA, tetramer, GXXXG, o 83.6
3rim_A700 Transketolase, TK; TPP, transferase; HET: TPP; 2.4 83.49
1yd7_A 395 2-keto acid:ferredoxin oxidoreductase subunit alph 83.4
2vbf_A 570 Branched-chain alpha-ketoacid decarboxylase; KDCA, 81.67
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A* Back     alignment and structure
Probab=100.00  E-value=2.7e-90  Score=764.13  Aligned_cols=534  Identities=44%  Similarity=0.749  Sum_probs=446.3

Q ss_pred             CcHHHHHHHHHHHcCCCEEEecCCCChHHHHHhhhcCCCCeEEeCcchHHHHHHHhHHhHhcCccEEEEeCChhhHHHHH
Q 044559           44 STLGRHLARRLVQIGATDVFSVPGDFNLTLLDHLIAEPGLNLIGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLN  123 (585)
Q Consensus        44 ~~~a~~i~~~L~~~GV~~vFg~PG~~~~~l~~al~~~~~i~~i~~~~E~~A~~~A~Gyar~tg~~v~~~tsGpG~~n~~~  123 (585)
                      |+++++|++.|+++||++|||+||+++++|+++|.++++|++|.++||++|+|||+||||+||.+||++|+|||++|+++
T Consensus         3 ~~~a~~l~~~L~~~GV~~vfg~PG~~~~~l~~al~~~~~i~~i~~~~E~~Aa~~A~Gyar~tg~~v~~~TsGpG~~N~~~   82 (568)
T 2wvg_A            3 YTVGTYLAERLVQIGLKHHFAVAGDYNLVLLDNLLLNKNMEQVYCCNELNCGFSAEGYARAKGAAAAVVTYSVGALSAFD   82 (568)
T ss_dssp             EEHHHHHHHHHHHTTCSEEEECCCTTTHHHHHHHHTCTTSEEEECSSHHHHHHHHHHHHHHHSCEEEEECTTTTHHHHHH
T ss_pred             cCHHHHHHHHHHHcCCCEEEeCCCCccHHHHHHHhccCCceEeccCcHHHHHHHHHHHHHhhCCeEEEEeCCCCHHHHHH
Confidence            78999999999999999999999999999999998766899999999999999999999999988999999999999999


Q ss_pred             HHHHhhhcCCcEEEEeCCCCCcccCCccccccccCCCChhHHHhhhcceeEEEEEeCChhhHHHHHHHHHHHhhhcCCcE
Q 044559          124 AIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCYQAVVNNLEDAHELIDTAVSTALKESKPV  203 (585)
Q Consensus       124 ~l~~A~~~~~PllvI~g~~~~~~~~~~~~~~~~~~~~~~~dq~~~~~~~tk~~~~v~~~~~~~~~l~~A~~~a~~~~GPV  203 (585)
                      ||++|+.+++|||+|||+++....+++..+||..+.+++.||.++|+++|||++++++++++++.+++|++.|.+++|||
T Consensus        83 gia~A~~~~vPll~itg~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~tk~~~~v~~~~~~~~~l~~A~~~A~~~~GPV  162 (568)
T 2wvg_A           83 AIGGAYAENLPVILISGAPNNNDHAAGHVLHHALGKTDYHYQLEMAKNITAAAEAIYTPEEAPAKIDHVIKTALREKKPV  162 (568)
T ss_dssp             HHHHHHHTTCCEEEEEEECCGGGTTTTCBCTTSCSSSCCCHHHHHHTTSCSCEEEECSGGGHHHHHHHHHHHHHHHTCCE
T ss_pred             HHHHHhhhCCCEEEEeCCCChhHhccCcceeeeccccchHHHHHHHHhhEeEEEEeCCHHHHHHHHHHHHHHHHhCCCCE
Confidence            99999999999999999999998888777777765567779999999999999999999999999999999999988999


Q ss_pred             EEEecCCCCCCCCCCCCCCCCCCcCCCCCCChhhHHHHHHHHHHHHHhcCCCEEEcCCcccccchHHHHHHHHHHhCCce
Q 044559          204 YISVACNLPAIPHPTFSREPVPFSLSPKLSNEMGLEAAVEAAAEFLNKAVKPVLVAGPKMRVAKACNAFVELADACGYAV  283 (585)
Q Consensus       204 ~i~iP~dv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~L~~a~rpvIi~G~g~~~~~a~~~l~~lae~~~~Pv  283 (585)
                      ||+||.|++..+  .......+....+......++.+.+++++++|.+||||+|++|.|+.++++.+++++|||++++||
T Consensus       163 ~l~iP~dv~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~a~rpvil~G~g~~~~~a~~~l~~lae~~~~Pv  240 (568)
T 2wvg_A          163 YLEIACNIASMP--CAAPGPASALFNDEASDEASLNAAVEETLKFIANRDKVAVLVGSKLRAAGAEEAAVKFADALGGAV  240 (568)
T ss_dssp             EEEEEGGGTTSE--ECEECCTHHHHCCCCCCHHHHHHHHHHHHHHHTTCCCEEEEECTTTTTTTCHHHHHHHHHHHCCEE
T ss_pred             EEEechhHhcCc--ccCCCcccccccCCCCCccccHHHHHHHHHHHHhCCCCEEEECccccccchHHHHHHHHHHhCCCE
Confidence            999999997642  111001111011111122345567999999999999999999999998899999999999999999


Q ss_pred             EeCCCCccccCCCCCCccccccCCCCCCc---------------------ccccccccCCCccEEEEcCCcceeccCCcc
Q 044559          284 AVMPSAKGLVPEHHPHFIGTYWGAVSTAF---------------------FSVGYSLLLKKEKAVILQPDRVVIANGPAF  342 (585)
Q Consensus       284 ~tt~~gkg~~~~~hp~~~g~~~g~~~~~~---------------------~~~~~~~~~~~~~~i~vd~d~~~i~~~~~~  342 (585)
                      ++|++|||.||++||+++|.+.|..+...                     .+..|..+.++.++||||.|+.+++ ...+
T Consensus       241 ~~t~~~kg~~~~~~p~~~G~~~g~~~~~~~~~~l~~aDlvl~iG~~~~~~~~~~~~~~~~~~~~i~id~d~~~~~-~~~~  319 (568)
T 2wvg_A          241 ATMAAAKSFFPEENPHYIGTSWGEVSYPGVEKTMKEADAVIALAPVFNDYSTTGWTDIPDPKKLVLAEPRSVVVN-GIRF  319 (568)
T ss_dssp             EEEGGGTTSSCTTSTTEEEEECGGGSCTTHHHHHHHCSEEEEESCCCBTTTTTTTTCCCCTTTEEEECSSEEEET-TEEE
T ss_pred             EEchhcCccCCCCCCceeccccCCcCCHHHHHHHHhCCEEEEECCCcccccccccccCCCCCcEEEEeCChhhcC-Ceec
Confidence            99999999999999999998644333221                     1223443445678999999999987 5566


Q ss_pred             ccccHHHHHHHHHHHhccCcchhhhhccccCCCCCC-CCCCCCCCcCHHHHHHHHHhhCCCCCEEEecCCcccccccccc
Q 044559          343 GCVLMKDFLKALSKRLKSNTTAYENYHRIYVPEGQP-PKCEPKEPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLK  421 (585)
Q Consensus       343 ~~~~~~~~l~~L~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~l~~~l~~~~iiv~d~G~~~~~~~~~~  421 (585)
                      .+++++.+|++|.+.+......|..|.+........ .......++++..+++.|.+.++++++++.|+|++.+...+++
T Consensus       320 ~~~~~~~~l~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~iv~~d~G~~~~~~~~~~  399 (568)
T 2wvg_A          320 PSVHLKDYLTRLAQKVSKKTGALDFFKSLNAGELKKAAPADPSAPLVNAEIARQVEALLTPNTTVIAETGDSWFNAQRMK  399 (568)
T ss_dssp             ESCCHHHHHHHHHHHCCCCCHHHHHHHHTTCCSCCCCCCCCTTSBCCHHHHHHHHHTTCCTTEEEEECSSHHHHHHHTCC
T ss_pred             CCCCHHHHHHHHHHhccccccchhhhhhhhhhcccccccCCCCCccCHHHHHHHHHHhCCCCCEEEEcCcHHHHHHhhcc
Confidence            677899999999987754332233343221101111 1111234689999999999999999999999999875555666


Q ss_pred             ccCCCeeeecCCcccccchhHHHHhhhhcCCCCcEEEEEccchhcccHHHHHHHHHhCCceEEEEEeCCcceeeeeecCC
Q 044559          422 LPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDG  501 (585)
Q Consensus       422 ~~~~~~~~~~~~~g~mG~~lpaAiGaalA~p~r~vv~v~GDGsf~~~~~eL~ta~~~~lpv~ivV~NN~~~~~~~~~~~~  501 (585)
                      .+++.+++.++++|+||+++|+|+|+++|+|+++|++++|||+|+|+++||+|++++++|+++||+||++|+|.+.++..
T Consensus       400 ~~~~~~~~~~~~~g~~G~~l~~A~G~ala~~~~~vv~i~GDGs~~~~~~el~ta~~~~l~~~ivv~NN~~~~~~~~~~~~  479 (568)
T 2wvg_A          400 LPNGARVEYEMQWGHIGWSVPAAFGYAVGAPERRNILMVGDGSFQLTAQEVAQMVRLKLPVIIFLINNYGYTIEVMIHDG  479 (568)
T ss_dssp             CCTTCEEECCTTTCCTTTHHHHHHHHHHHCTTSEEEEEEEHHHHHHHGGGHHHHHHTTCCCEEEEEECSSCHHHHTTSCC
T ss_pred             cCCCCeEEeCCCcchhhhHHHHHHHHHHhCCCCcEEEEEcChhHhccHHHHHHHHHcCCCcEEEEEECCcceEeeeeccC
Confidence            77777799999999999999999999999999999999999999999999999999999999999999999996555455


Q ss_pred             CcCCCCCCChHHHHHHhcCCC----CCceeEEEcCHHHHHHHHHhhcCCCC-CCeEEEEEEcCCCCChHHHHHHHHHhhh
Q 044559          502 PYNVIKNWNYTGLVDAIHNGE----GKCWTTKVFCEEELIEAIENATGPKK-DCLCFIEVLVHKDDTSKELLEWGSRVSA  576 (585)
Q Consensus       502 ~~~~~~~~d~~~la~a~G~~~----~~~~~~~V~~~~eL~~aL~~a~~~~~-~gp~vIeV~v~~~~~~~~~~~~~~~~~~  576 (585)
                      .|.++.++||.++|++||+..    ...++++|++.+||.++|+++++  . ++|+||||.+++++.++.++++++.+++
T Consensus       480 ~~~~~~~~d~~~~a~a~G~~~~~~~~~~~~~~v~~~~el~~al~~a~~--~~~gp~liev~~~~~~~~~~~~~~~~~~~~  557 (568)
T 2wvg_A          480 PYNNIKNWDYAGLMEVFNGNGGYDSGAGKGLKAKTGGELAEAIKVALA--NTDGPTLIECFIGREDCTEELVKWGKRVAA  557 (568)
T ss_dssp             GGGCCCCCCHHHHHHHHHCTTSSSCCCCEEEEESBHHHHHHHHHHHHH--CCSSCEEEEEECCTTCCCHHHHHHHHHHHH
T ss_pred             CCcCCCCCCHHHHHHHhCCCcccccCCcceEEeCCHHHHHHHHHHHHh--cCCCcEEEEEEcCccccCHHHHHHHHHhHh
Confidence            566777899999999999710    01158899999999999999986  5 8999999999999999999999999999


Q ss_pred             hcCCCC
Q 044559          577 ANSRPP  582 (585)
Q Consensus       577 ~~~~~~  582 (585)
                      .|+++|
T Consensus       558 ~~~~~~  563 (568)
T 2wvg_A          558 ANSRKP  563 (568)
T ss_dssp             HHHCCC
T ss_pred             hccCCc
Confidence            877665
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus} Back     alignment and structure
>2vk8_A Pyruvate decarboxylase isozyme 1; asymmetric active sites, phenylalanine catabolism, tryptophan catabolism, thiamine pyrophosphate; HET: TPP; 1.42A {Saccharomyces cerevisiae} PDB: 1qpb_A* 2vk1_A* 2w93_A* 1pyd_A* 1pvd_A* 2vk4_A* 2vjy_A* 2g1i_A* Back     alignment and structure
>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 Back     alignment and structure
>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A* Back     alignment and structure
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A* Back     alignment and structure
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A* Back     alignment and structure
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A* Back     alignment and structure
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A* Back     alignment and structure
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A* Back     alignment and structure
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A* Back     alignment and structure
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis} Back     alignment and structure
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X* Back     alignment and structure
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A* Back     alignment and structure
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A* Back     alignment and structure
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes} Back     alignment and structure
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A* Back     alignment and structure
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli} Back     alignment and structure
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A* Back     alignment and structure
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A* Back     alignment and structure
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A* Back     alignment and structure
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A* Back     alignment and structure
>1w85_A Pyruvate dehydrogenase E1 component, alpha subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.11 PDB: 3duf_A* 3dv0_A* 3dva_A* 1w88_A* Back     alignment and structure
>2o1x_A 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, isoprenoid, DXS, transferase; HET: TDP; 2.90A {Deinococcus radiodurans} Back     alignment and structure
>2bfd_A 2-oxoisovalerate dehydrogenase alpha subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.11 PDB: 1v16_A* 2bfc_A* 1v1r_A* 1olu_A* 2bfb_A* 1v1m_A* 2bew_A* 1dtw_A* 1olx_A* 1ols_A* 1wci_A* 1x80_A* 2beu_A* 1u5b_A* 2bev_A* 1v11_A* 1x7x_A* 1x7y_A* 1x7w_A* 1x7z_A* ... Back     alignment and structure
>1umd_A E1-alpha, 2-OXO acid dehydrogenase alpha subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.11 PDB: 1um9_A* 1umc_A* 1umb_A* Back     alignment and structure
>3l84_A Transketolase; TKT, structural genomics, center for structur genomics of infectious diseases, csgid, transferase; HET: MSE; 1.36A {Campylobacter jejuni} PDB: 3m6l_A* 3m34_A* 3m7i_A* Back     alignment and structure
>1yd7_A 2-keto acid:ferredoxin oxidoreductase subunit alpha; structural genomics, southeast collaboratory for structural genomics, secsg; 2.30A {Pyrococcus furiosus} Back     alignment and structure
>3uk1_A Transketolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, thiamine pyrophosphate; 2.15A {Burkholderia thailandensis} PDB: 3upt_A* Back     alignment and structure
>1qs0_A 2-oxoisovalerate dehydrogenase alpha-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.11 PDB: 2bp7_A Back     alignment and structure
>3kom_A Transketolase; rossmann fold, csgid, transferase, structural genomics, center for structural genomics of infectious DISE; HET: MSE; 1.60A {Francisella tularensis subsp} Back     alignment and structure
>3m49_A Transketolase; alpha-beta-alpha sandwich, csgid, transferase, structural genomics, center for structural genomics of infectious diseases; HET: MSE TDP PG5 TRS BTB; 2.00A {Bacillus anthracis} PDB: 3hyl_A* Back     alignment and structure
>3mos_A Transketolase, TK; thiamin diphosphate TPP THDP enzyme catalysis sugar metaboli transferase; HET: TPP; 1.75A {Homo sapiens} PDB: 3ooy_A* Back     alignment and structure
>2o1s_A 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thiamine, isoprenoid, transferase; HET: TDP; 2.40A {Escherichia coli} Back     alignment and structure
>2e6k_A Transketolase; structural genomics, NPPSFA, national project protein structural and functional analyses; 2.09A {Thermus thermophilus} Back     alignment and structure
>2r8o_A Transketolase 1, TK 1; reaction intermediate, calcium, metal-binding, thiamine pyrophosphate, transferase; HET: T5X; 1.47A {Escherichia coli K12} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2r5n_A* 2r8p_A* 1qgd_A* Back     alignment and structure
>1itz_A Transketolase; calvin cycle, cofactor, thiamine pyrophosphate, plant, transferase; HET: TPP; 2.30A {Zea mays} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 Back     alignment and structure
>1gpu_A Transketolase; transferase(ketone residues); HET: THD; 1.86A {Saccharomyces cerevisiae} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 1ngs_A* 1trk_A* 1ay0_A* 1tkb_A* 1tka_A* 1tkc_A* Back     alignment and structure
>2ozl_A PDHE1-A type I, pyruvate dehydrogenase E1 component alpha subunit, somatic form; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.11 PDB: 1ni4_A* 3exe_A* 3exi_A 3exh_A* 3exg_A 3exf_A* Back     alignment and structure
>1r9j_A Transketolase; domains, EACH of the alpha/beta type, thiamine diphosphate binding domain, transferase; HET: TPP; 2.22A {Leishmania mexicana mexicana} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 Back     alignment and structure
>3cf4_G Acetyl-COA decarboxylase/synthase epsilon subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri} Back     alignment and structure
>3rim_A Transketolase, TK; TPP, transferase; HET: TPP; 2.49A {Mycobacterium tuberculosis} Back     alignment and structure
>2yic_A 2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.96A {Mycobacterium smegmatis} PDB: 2xta_A* 2y0p_A* 2xt9_A* 2yid_A* Back     alignment and structure
>1ytl_A Acetyl-COA decarboxylase/synthase complex epsilon 2; structural genomics; 1.80A {Archaeoglobus fulgidus} SCOP: c.31.1.6 Back     alignment and structure
>2qtc_A Pyruvate dehydrogenase E1 component; thiamin diphosphate, glycolysis, MAG metal-binding, oxidoreductase, thiamine pyrophosphate; HET: TDK; 1.77A {Escherichia coli} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2qta_A* 1l8a_A* 1rp7_A* 2g25_A* 2g28_A* 2g67_A 2iea_A* 3lpl_A* 3lq2_A* 3lq4_A* Back     alignment and structure
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis} Back     alignment and structure
>2jgd_A 2-oxoglutarate dehydrogenase E1 component; flavoprotein, oxidoreductase, thiamine diphosphate, thiamine pyrophosphate, adenosine monophosphate; HET: AMP; 2.6A {Escherichia coli} PDB: 2jgd_B* Back     alignment and structure
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A* Back     alignment and structure
>3ahc_A Phosphoketolase, xylulose 5-phosphate/fructose 6-phosphate phospho; thiamine diphosphate-dependent enzyme, alpha-beta fold; HET: TPP 2PE; 1.70A {Bifidobacterium breve} PDB: 3ahd_A* 3ahe_A* 3ahf_A* 3ahj_A* 3ahi_A* 3ahh_A* 3ahg_A* 3ai7_A* Back     alignment and structure
>2bfd_B 2-oxoisovalerate dehydrogenase beta subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1dtw_B* 1olu_B* 1ols_B* 1v11_B* 1v16_B* 1v1m_B* 1u5b_B* 1wci_B* 1v1r_B* 1x7x_B* 1x7w_B* 1x7z_B* 1x80_B* 2beu_B* 2bev_B* 2bew_B* 2bfb_B* 2bfc_B* 1x7y_B* 2bfe_B* ... Back     alignment and structure
>3mos_A Transketolase, TK; thiamin diphosphate TPP THDP enzyme catalysis sugar metaboli transferase; HET: TPP; 1.75A {Homo sapiens} PDB: 3ooy_A* Back     alignment and structure
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A* Back     alignment and structure
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli} Back     alignment and structure
>2ozl_B PDHE1-B, pyruvate dehydrogenase E1 component subunit beta; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1ni4_B* 3exe_B* 3exf_B* 3exg_B 3exh_B* 3exi_B Back     alignment and structure
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A* Back     alignment and structure
>1w85_B Pyruvate dehydrogenase E1 component, beta subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1w88_B* 3dva_B* 3dv0_B* 3duf_B* Back     alignment and structure
>1qs0_B 2-oxoisovalerate dehydrogenase beta-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.7 c.48.1.2 PDB: 2bp7_B Back     alignment and structure
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A* Back     alignment and structure
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A* Back     alignment and structure
>2r8o_A Transketolase 1, TK 1; reaction intermediate, calcium, metal-binding, thiamine pyrophosphate, transferase; HET: T5X; 1.47A {Escherichia coli K12} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2r5n_A* 2r8p_A* 1qgd_A* Back     alignment and structure
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A* Back     alignment and structure
>1umd_B E1-beta, 2-OXO acid dehydrogenase beta subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1um9_B* 1umc_B* 1umb_B* Back     alignment and structure
>3l84_A Transketolase; TKT, structural genomics, center for structur genomics of infectious diseases, csgid, transferase; HET: MSE; 1.36A {Campylobacter jejuni} PDB: 3m6l_A* 3m34_A* 3m7i_A* Back     alignment and structure
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A* Back     alignment and structure
>2o1s_A 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thiamine, isoprenoid, transferase; HET: TDP; 2.40A {Escherichia coli} Back     alignment and structure
>1ik6_A Pyruvate dehydrogenase; E1BETA, tetramer, GXXXG, oxidoreductase; 2.00A {Pyrobaculum aerophilum} SCOP: c.36.1.7 c.48.1.2 Back     alignment and structure
>2e6k_A Transketolase; structural genomics, NPPSFA, national project protein structural and functional analyses; 2.09A {Thermus thermophilus} Back     alignment and structure
>3kom_A Transketolase; rossmann fold, csgid, transferase, structural genomics, center for structural genomics of infectious DISE; HET: MSE; 1.60A {Francisella tularensis subsp} Back     alignment and structure
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A* Back     alignment and structure
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A* Back     alignment and structure
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A* Back     alignment and structure
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A* Back     alignment and structure
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X* Back     alignment and structure
>2o1x_A 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, isoprenoid, DXS, transferase; HET: TDP; 2.90A {Deinococcus radiodurans} Back     alignment and structure
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis} Back     alignment and structure
>1w85_A Pyruvate dehydrogenase E1 component, alpha subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.11 PDB: 3duf_A* 3dv0_A* 3dva_A* 1w88_A* Back     alignment and structure
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A* Back     alignment and structure
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A* Back     alignment and structure
>3uk1_A Transketolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, thiamine pyrophosphate; 2.15A {Burkholderia thailandensis} PDB: 3upt_A* Back     alignment and structure
>1r9j_A Transketolase; domains, EACH of the alpha/beta type, thiamine diphosphate binding domain, transferase; HET: TPP; 2.22A {Leishmania mexicana mexicana} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 Back     alignment and structure
>1itz_A Transketolase; calvin cycle, cofactor, thiamine pyrophosphate, plant, transferase; HET: TPP; 2.30A {Zea mays} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 Back     alignment and structure
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus} Back     alignment and structure
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A* Back     alignment and structure
>1gpu_A Transketolase; transferase(ketone residues); HET: THD; 1.86A {Saccharomyces cerevisiae} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 1ngs_A* 1trk_A* 1ay0_A* 1tkb_A* 1tka_A* 1tkc_A* Back     alignment and structure
>2vk8_A Pyruvate decarboxylase isozyme 1; asymmetric active sites, phenylalanine catabolism, tryptophan catabolism, thiamine pyrophosphate; HET: TPP; 1.42A {Saccharomyces cerevisiae} PDB: 1qpb_A* 2vk1_A* 2w93_A* 1pyd_A* 1pvd_A* 2vk4_A* 2vjy_A* 2g1i_A* Back     alignment and structure
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A* Back     alignment and structure
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes} Back     alignment and structure
>2bfd_A 2-oxoisovalerate dehydrogenase alpha subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.11 PDB: 1v16_A* 2bfc_A* 1v1r_A* 1olu_A* 2bfb_A* 1v1m_A* 2bew_A* 1dtw_A* 1olx_A* 1ols_A* 1wci_A* 1x80_A* 2beu_A* 1u5b_A* 2bev_A* 1v11_A* 1x7x_A* 1x7y_A* 1x7w_A* 1x7z_A* ... Back     alignment and structure
>3m49_A Transketolase; alpha-beta-alpha sandwich, csgid, transferase, structural genomics, center for structural genomics of infectious diseases; HET: MSE TDP PG5 TRS BTB; 2.00A {Bacillus anthracis} PDB: 3hyl_A* Back     alignment and structure
>1qs0_A 2-oxoisovalerate dehydrogenase alpha-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.11 PDB: 2bp7_A Back     alignment and structure
>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 Back     alignment and structure
>2ozl_A PDHE1-A type I, pyruvate dehydrogenase E1 component alpha subunit, somatic form; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.11 PDB: 1ni4_A* 3exe_A* 3exi_A 3exh_A* 3exg_A 3exf_A* Back     alignment and structure
>1ik6_A Pyruvate dehydrogenase; E1BETA, tetramer, GXXXG, oxidoreductase; 2.00A {Pyrobaculum aerophilum} SCOP: c.36.1.7 c.48.1.2 Back     alignment and structure
>3rim_A Transketolase, TK; TPP, transferase; HET: TPP; 2.49A {Mycobacterium tuberculosis} Back     alignment and structure
>1yd7_A 2-keto acid:ferredoxin oxidoreductase subunit alpha; structural genomics, southeast collaboratory for structural genomics, secsg; 2.30A {Pyrococcus furiosus} Back     alignment and structure
>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 585
d1zpda3204 c.36.1.9 (A:363-566) Pyruvate decarboxylase {Zymom 2e-37
d1zpda1175 c.31.1.3 (A:188-362) Pyruvate decarboxylase {Zymom 2e-30
d1pvda2180 c.36.1.5 (A:2-181) Pyruvate decarboxylase {Baker's 3e-29
d1pvda3196 c.36.1.9 (A:361-556) Pyruvate decarboxylase {Baker 4e-29
d1zpda2186 c.36.1.5 (A:2-187) Pyruvate decarboxylase {Zymomon 3e-28
d1ovma3196 c.36.1.9 (A:356-551) Indole-3-pyruvate decarboxyla 1e-26
d1t9ba2175 c.36.1.5 (A:89-263) Acetohydroxyacid synthase cata 4e-23
d1ovma2178 c.36.1.5 (A:3-180) Indole-3-pyruvate decarboxylase 6e-22
d1ybha2195 c.36.1.5 (A:86-280) Acetohydroxyacid synthase cata 1e-21
d1pvda1179 c.31.1.3 (A:182-360) Pyruvate decarboxylase {Baker 6e-20
d1ovma1161 c.31.1.3 (A:181-341) Indole-3-pyruvate decarboxyla 6e-19
d2ez9a2174 c.36.1.5 (A:9-182) Pyruvate oxidase {Lactobacillus 3e-12
d2djia2184 c.36.1.5 (A:3-186) Pyruvate oxidase {Aerococcus vi 2e-11
d2ez9a3228 c.36.1.9 (A:366-593) Pyruvate oxidase {Lactobacill 3e-11
d1ozha2181 c.36.1.5 (A:7-187) Catabolic acetolactate synthase 9e-11
d2ihta3198 c.36.1.9 (A:375-572) Carboxyethylarginine synthase 8e-10
d1ybha3208 c.36.1.9 (A:460-667) Acetohydroxyacid synthase cat 2e-09
d2ihta1177 c.31.1.3 (A:198-374) Carboxyethylarginine synthase 3e-09
d2ihta2186 c.36.1.5 (A:12-197) Carboxyethylarginine synthase 5e-08
d2ji7a1175 c.31.1.3 (A:195-369) Oxalyl-CoA decarboxylase {Oxa 6e-07
d1ozha1179 c.31.1.3 (A:188-366) Catabolic acetolactate syntha 2e-06
d2ji7a2188 c.36.1.5 (A:7-194) Oxalyl-CoA decarboxylase {Oxalo 7e-06
d1ytla1158 c.31.1.6 (A:17-174) Acetyl-CoA decarbonylase/synth 9e-06
d1q6za2180 c.36.1.5 (A:2-181) Benzoylformate decarboxylase {P 1e-05
d1q6za1160 c.31.1.3 (A:182-341) Benzoylformate decarboxylase 2e-05
d1ybha1179 c.31.1.3 (A:281-459) Acetohydroxyacid synthase cat 0.001
>d1zpda3 c.36.1.9 (A:363-566) Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 542]} Length = 204 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Thiamin diphosphate-binding fold (THDP-binding)
superfamily: Thiamin diphosphate-binding fold (THDP-binding)
family: Pyruvate oxidase and decarboxylase PP module
domain: Pyruvate decarboxylase
species: Zymomonas mobilis [TaxId: 542]

 Score =  135 bits (340), Expect = 2e-37
 Identities = 100/201 (49%), Positives = 129/201 (64%), Gaps = 5/201 (2%)

Query: 386 PLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATL 445
           PL    + + ++ +L+  T VIAETGDSWFN Q++KLP G   E++MQ+G IGWSV A  
Sbjct: 2   PLVNAEIARQVEALLTPNTTVIAETGDSWFNAQRMKLPNGARVEYEMQWGHIGWSVPAAF 61

Query: 446 GYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNV 505
           GYA   PE+R I  +GDGSFQ+TAQ+V+ M+R     IIFLINN GYTIEV IHDGPYN 
Sbjct: 62  GYAVGAPERRNILMVGDGSFQLTAQEVAQMVRLKLPVIIFLINNYGYTIEVMIHDGPYNN 121

Query: 506 IKNWNYTGLVDAI----HNGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKD 561
           IKNW+Y GL++          G     K     EL EAI+ A     D    IE  + ++
Sbjct: 122 IKNWDYAGLMEVFNGNGGYDSGAAKGLKAKTGGELAEAIKVALA-NTDGPTLIECFIGRE 180

Query: 562 DTSKELLEWGSRVSAANSRPP 582
           D ++EL++WG RV+AANSR P
Sbjct: 181 DCTEELVKWGKRVAAANSRKP 201
>d1zpda1 c.31.1.3 (A:188-362) Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 542]} Length = 175 Back     information, alignment and structure
>d1pvda2 c.36.1.5 (A:2-181) Pyruvate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 180 Back     information, alignment and structure
>d1pvda3 c.36.1.9 (A:361-556) Pyruvate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 196 Back     information, alignment and structure
>d1zpda2 c.36.1.5 (A:2-187) Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 542]} Length = 186 Back     information, alignment and structure
>d1ovma3 c.36.1.9 (A:356-551) Indole-3-pyruvate decarboxylase {Enterobacter cloacae [TaxId: 550]} Length = 196 Back     information, alignment and structure
>d1t9ba2 c.36.1.5 (A:89-263) Acetohydroxyacid synthase catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 175 Back     information, alignment and structure
>d1ovma2 c.36.1.5 (A:3-180) Indole-3-pyruvate decarboxylase {Enterobacter cloacae [TaxId: 550]} Length = 178 Back     information, alignment and structure
>d1ybha2 c.36.1.5 (A:86-280) Acetohydroxyacid synthase catalytic subunit {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]} Length = 195 Back     information, alignment and structure
>d1pvda1 c.31.1.3 (A:182-360) Pyruvate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 179 Back     information, alignment and structure
>d1ovma1 c.31.1.3 (A:181-341) Indole-3-pyruvate decarboxylase {Enterobacter cloacae [TaxId: 550]} Length = 161 Back     information, alignment and structure
>d2ez9a2 c.36.1.5 (A:9-182) Pyruvate oxidase {Lactobacillus plantarum [TaxId: 1590]} Length = 174 Back     information, alignment and structure
>d2djia2 c.36.1.5 (A:3-186) Pyruvate oxidase {Aerococcus viridans [TaxId: 1377]} Length = 184 Back     information, alignment and structure
>d2ez9a3 c.36.1.9 (A:366-593) Pyruvate oxidase {Lactobacillus plantarum [TaxId: 1590]} Length = 228 Back     information, alignment and structure
>d1ozha2 c.36.1.5 (A:7-187) Catabolic acetolactate synthase {Klebsiella pneumoniae [TaxId: 573]} Length = 181 Back     information, alignment and structure
>d2ihta3 c.36.1.9 (A:375-572) Carboxyethylarginine synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 198 Back     information, alignment and structure
>d1ybha3 c.36.1.9 (A:460-667) Acetohydroxyacid synthase catalytic subunit {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]} Length = 208 Back     information, alignment and structure
>d2ihta1 c.31.1.3 (A:198-374) Carboxyethylarginine synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 177 Back     information, alignment and structure
>d2ihta2 c.36.1.5 (A:12-197) Carboxyethylarginine synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 186 Back     information, alignment and structure
>d2ji7a1 c.31.1.3 (A:195-369) Oxalyl-CoA decarboxylase {Oxalobacter formigenes [TaxId: 847]} Length = 175 Back     information, alignment and structure
>d1ozha1 c.31.1.3 (A:188-366) Catabolic acetolactate synthase {Klebsiella pneumoniae [TaxId: 573]} Length = 179 Back     information, alignment and structure
>d2ji7a2 c.36.1.5 (A:7-194) Oxalyl-CoA decarboxylase {Oxalobacter formigenes [TaxId: 847]} Length = 188 Back     information, alignment and structure
>d1ytla1 c.31.1.6 (A:17-174) Acetyl-CoA decarbonylase/synthase complex epsilon subunit 2, ACDE2 {Archaeoglobus fulgidus [TaxId: 2234]} Length = 158 Back     information, alignment and structure
>d1q6za2 c.36.1.5 (A:2-181) Benzoylformate decarboxylase {Pseudomonas putida [TaxId: 303]} Length = 180 Back     information, alignment and structure
>d1q6za1 c.31.1.3 (A:182-341) Benzoylformate decarboxylase {Pseudomonas putida [TaxId: 303]} Length = 160 Back     information, alignment and structure
>d1ybha1 c.31.1.3 (A:281-459) Acetohydroxyacid synthase catalytic subunit {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]} Length = 179 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query585
d1zpda2186 Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 100.0
d1pvda2180 Pyruvate decarboxylase {Baker's yeast (Saccharomyc 100.0
d2ez9a2174 Pyruvate oxidase {Lactobacillus plantarum [TaxId: 100.0
d2djia2184 Pyruvate oxidase {Aerococcus viridans [TaxId: 1377 100.0
d1ozha2181 Catabolic acetolactate synthase {Klebsiella pneumo 100.0
d1ybha2195 Acetohydroxyacid synthase catalytic subunit {Thale 100.0
d1t9ba2175 Acetohydroxyacid synthase catalytic subunit {Baker 100.0
d1zpda3204 Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 100.0
d1q6za2180 Benzoylformate decarboxylase {Pseudomonas putida [ 100.0
d2ihta2186 Carboxyethylarginine synthase {Streptomyces clavul 100.0
d2ji7a2188 Oxalyl-CoA decarboxylase {Oxalobacter formigenes [ 100.0
d1ovma3196 Indole-3-pyruvate decarboxylase {Enterobacter cloa 100.0
d1ovma2178 Indole-3-pyruvate decarboxylase {Enterobacter cloa 100.0
d1ybha3208 Acetohydroxyacid synthase catalytic subunit {Thale 100.0
d2ez9a3228 Pyruvate oxidase {Lactobacillus plantarum [TaxId: 100.0
d1pvda3196 Pyruvate decarboxylase {Baker's yeast (Saccharomyc 100.0
d2djia3229 Pyruvate oxidase {Aerococcus viridans [TaxId: 1377 100.0
d1ozha3192 Catabolic acetolactate synthase {Klebsiella pneumo 100.0
d1t9ba3227 Acetohydroxyacid synthase catalytic subunit {Baker 100.0
d2ihta3198 Carboxyethylarginine synthase {Streptomyces clavul 100.0
d1q6za3183 Benzoylformate decarboxylase {Pseudomonas putida [ 100.0
d2ji7a3183 Oxalyl-CoA decarboxylase {Oxalobacter formigenes [ 100.0
d1zpda1175 Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 99.83
d1ovma1161 Indole-3-pyruvate decarboxylase {Enterobacter cloa 99.8
d1pvda1179 Pyruvate decarboxylase {Baker's yeast (Saccharomyc 99.79
d1ybha1179 Acetohydroxyacid synthase catalytic subunit {Thale 99.75
d2ihta1177 Carboxyethylarginine synthase {Streptomyces clavul 99.74
d2ez9a1183 Pyruvate oxidase {Lactobacillus plantarum [TaxId: 99.72
d2djia1177 Pyruvate oxidase {Aerococcus viridans [TaxId: 1377 99.72
d1ozha1179 Catabolic acetolactate synthase {Klebsiella pneumo 99.7
d2ji7a1175 Oxalyl-CoA decarboxylase {Oxalobacter formigenes [ 99.69
d1t9ba1171 Acetohydroxyacid synthase catalytic subunit {Baker 99.69
d1q6za1160 Benzoylformate decarboxylase {Pseudomonas putida [ 99.55
d1ytla1158 Acetyl-CoA decarbonylase/synthase complex epsilon 99.25
d1w85a_365 Pyruvate dehydrogenase E1-alpha, PdhA {Bacillus st 98.86
d1qs0a_407 2-oxoisovalerate dehydrogenase (E1B), PP module {P 98.84
d2c42a2 447 Pyruvate-ferredoxin oxidoreductase, PFOR, domains 98.82
d2r8oa2331 Transketolase (TK), PP module {Escherichia coli [T 98.81
d1umda_362 Branched-chain alpha-keto acid dehydrogenase, PP m 98.8
d2bfda1395 Branched-chain alpha-keto acid dehydrogenase, PP m 98.79
d2c42a1257 Pyruvate-ferredoxin oxidoreductase, PFOR, domain I 98.74
d1r9ja2336 Transketolase (TK), PP module {Leishmania mexicana 98.74
d1itza1338 Transketolase (TK), PP module {Maize (Zea mays) [T 98.69
d1gpua1335 Transketolase (TK), PP module {Baker's yeast (Sacc 98.68
d2ozla1361 E1-beta subunit of pyruvate dehydrogenase (PP modu 98.54
d2ieaa2 415 Pyruvate dehydrogenase E1 component, PP module {Es 97.73
d1t9ba2175 Acetohydroxyacid synthase catalytic subunit {Baker 97.28
d1ozha2181 Catabolic acetolactate synthase {Klebsiella pneumo 97.17
d2djia2184 Pyruvate oxidase {Aerococcus viridans [TaxId: 1377 97.11
d2ihta2186 Carboxyethylarginine synthase {Streptomyces clavul 97.1
d1pvda2180 Pyruvate decarboxylase {Baker's yeast (Saccharomyc 97.02
d1ybha2195 Acetohydroxyacid synthase catalytic subunit {Thale 97.0
d1zpda2186 Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 96.92
d1q6za2180 Benzoylformate decarboxylase {Pseudomonas putida [ 96.76
d2ez9a2174 Pyruvate oxidase {Lactobacillus plantarum [TaxId: 96.7
d2ji7a2188 Oxalyl-CoA decarboxylase {Oxalobacter formigenes [ 96.67
d1r9ja1190 Transketolase (TK), Pyr module {Leishmania mexican 95.61
d1itza2192 Transketolase (TK), Pyr module {Maize (Zea mays) [ 95.52
d1gpua2197 Transketolase (TK), Pyr module {Baker's yeast (Sac 95.34
d1t9ba3227 Acetohydroxyacid synthase catalytic subunit {Baker 95.27
d2ez9a3228 Pyruvate oxidase {Lactobacillus plantarum [TaxId: 95.25
d2r8oa1195 Transketolase (TK), Pyr module {Escherichia coli [ 95.22
d2ji7a3183 Oxalyl-CoA decarboxylase {Oxalobacter formigenes [ 94.91
d1ovma2178 Indole-3-pyruvate decarboxylase {Enterobacter cloa 94.26
d1zpda3204 Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 94.25
d2djia3229 Pyruvate oxidase {Aerococcus viridans [TaxId: 1377 94.04
d1ozha3192 Catabolic acetolactate synthase {Klebsiella pneumo 93.93
d2ihta3198 Carboxyethylarginine synthase {Streptomyces clavul 93.84
d1w85a_365 Pyruvate dehydrogenase E1-alpha, PdhA {Bacillus st 93.54
d2bfda1395 Branched-chain alpha-keto acid dehydrogenase, PP m 93.54
d1umda_362 Branched-chain alpha-keto acid dehydrogenase, PP m 93.38
d1qs0a_407 2-oxoisovalerate dehydrogenase (E1B), PP module {P 93.13
d1ybha3208 Acetohydroxyacid synthase catalytic subunit {Thale 92.45
d2ozla1361 E1-beta subunit of pyruvate dehydrogenase (PP modu 91.26
d1ovma3196 Indole-3-pyruvate decarboxylase {Enterobacter cloa 90.31
d1q6za3183 Benzoylformate decarboxylase {Pseudomonas putida [ 88.72
d1pvda3196 Pyruvate decarboxylase {Baker's yeast (Saccharomyc 83.96
d1itza2192 Transketolase (TK), Pyr module {Maize (Zea mays) [ 83.61
d1efva2124 C-terminal domain of the electron transfer flavopr 82.28
d1qs0b1204 2-oxoisovalerate dehydrogenase (E1B), Pyr module { 80.87
>d1zpda2 c.36.1.5 (A:2-187) Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 542]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Thiamin diphosphate-binding fold (THDP-binding)
superfamily: Thiamin diphosphate-binding fold (THDP-binding)
family: Pyruvate oxidase and decarboxylase Pyr module
domain: Pyruvate decarboxylase
species: Zymomonas mobilis [TaxId: 542]

Probab=100.00  E-value=1.2e-42  Score=323.80  Aligned_cols=172  Identities=46%  Similarity=0.833  Sum_probs=161.7

Q ss_pred             CCcHHHHHHHHHHHcCCCEEEecCCCChHHHHHhhhcCCCCeEEeCcchHHHHHHHhHHhHhcCccEEEEeCChhhHHHH
Q 044559           43 ESTLGRHLARRLVQIGATDVFSVPGDFNLTLLDHLIAEPGLNLIGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVL  122 (585)
Q Consensus        43 ~~~~a~~i~~~L~~~GV~~vFg~PG~~~~~l~~al~~~~~i~~i~~~~E~~A~~~A~Gyar~tg~~v~~~tsGpG~~n~~  122 (585)
                      ++|++|+|++.|+++||++|||+||+.+++|+++|.++++|++|.+|||++|+|||+||+|++|+++|++|+|||++|++
T Consensus         1 s~Tv~~~l~~~L~~~Gv~~vFgvpG~~~~~l~dal~~~~~i~~v~~rhE~~A~~mA~gyar~tg~~~v~~t~GpG~~N~~   80 (186)
T d1zpda2           1 SYTVGTYLAERLVQIGLKHHFAVAGDYNLVLLDNLLLNKNMEQVYCCNELNCGFSAEGYARAKGAAAAVVTYSVGALSAF   80 (186)
T ss_dssp             CCBHHHHHHHHHHHTTCSEEEECCCTTTHHHHHHHHTCTTSEEEECSSHHHHHHHHHHHHHHHSCEEEEECTTTTHHHHH
T ss_pred             CeeHHHHHHHHHHHCCCCEEEEeCChhHHHHHHHHHHcCCceEeeeccccceehhhhhhhhccccceeEeeccccchhhh
Confidence            47999999999999999999999999999999999877789999999999999999999999999545568999999999


Q ss_pred             HHHHHhhhcCCcEEEEeCCCCCcccCCccccccccCCCChhHHHhhhcceeEEEEEeCChhhHHHHHHHHHHHhhhcCCc
Q 044559          123 NAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCYQAVVNNLEDAHELIDTAVSTALKESKP  202 (585)
Q Consensus       123 ~~l~~A~~~~~PllvI~g~~~~~~~~~~~~~~~~~~~~~~~dq~~~~~~~tk~~~~v~~~~~~~~~l~~A~~~a~~~~GP  202 (585)
                      +||++|+.+++|||+|+|+.+....+++...||.++..++.+|.++++++|||+.++.+++++++.+++|++.|.++|||
T Consensus        81 ~gl~~A~~~~~Pvl~isg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vtk~~~~v~~~~~~~~~i~~A~~~A~~~~~P  160 (186)
T d1zpda2          81 DAIGGAYAENLPVILISGAPNNNDHAAGHVLHHALGKTDYHYQLEMAKNITAAAEAIYTPEEAPAKIDHVIKTALREKKP  160 (186)
T ss_dssp             HHHHHHHHTTCCEEEEEEECCGGGTTTTCBCTTSCSSSCCCHHHHHHGGGCSCEEEECSGGGHHHHHHHHHHHHHHHTCC
T ss_pred             hhhhhhhhcccceEEEecccCcccccCCCcceeecCCcchhhhhhccCCceeeeeEcCCHHHHHHHHHHHHHHHhhCCCC
Confidence            99999999999999999999999888887788888766777899999999999999999999999999999999998899


Q ss_pred             EEEEecCCCCCC
Q 044559          203 VYISVACNLPAI  214 (585)
Q Consensus       203 V~i~iP~dv~~~  214 (585)
                      |||+||.|++..
T Consensus       161 V~l~iP~Dv~~~  172 (186)
T d1zpda2         161 VYLEIACNIASM  172 (186)
T ss_dssp             EEEEEETTSTTS
T ss_pred             EEEECCcchhhC
Confidence            999999999874
>d1pvda2 c.36.1.5 (A:2-181) Pyruvate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2ez9a2 c.36.1.5 (A:9-182) Pyruvate oxidase {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
>d2djia2 c.36.1.5 (A:3-186) Pyruvate oxidase {Aerococcus viridans [TaxId: 1377]} Back     information, alignment and structure
>d1ozha2 c.36.1.5 (A:7-187) Catabolic acetolactate synthase {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d1ybha2 c.36.1.5 (A:86-280) Acetohydroxyacid synthase catalytic subunit {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]} Back     information, alignment and structure
>d1t9ba2 c.36.1.5 (A:89-263) Acetohydroxyacid synthase catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1zpda3 c.36.1.9 (A:363-566) Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 542]} Back     information, alignment and structure
>d1q6za2 c.36.1.5 (A:2-181) Benzoylformate decarboxylase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d2ihta2 c.36.1.5 (A:12-197) Carboxyethylarginine synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d2ji7a2 c.36.1.5 (A:7-194) Oxalyl-CoA decarboxylase {Oxalobacter formigenes [TaxId: 847]} Back     information, alignment and structure
>d1ovma3 c.36.1.9 (A:356-551) Indole-3-pyruvate decarboxylase {Enterobacter cloacae [TaxId: 550]} Back     information, alignment and structure
>d1ovma2 c.36.1.5 (A:3-180) Indole-3-pyruvate decarboxylase {Enterobacter cloacae [TaxId: 550]} Back     information, alignment and structure
>d1ybha3 c.36.1.9 (A:460-667) Acetohydroxyacid synthase catalytic subunit {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]} Back     information, alignment and structure
>d2ez9a3 c.36.1.9 (A:366-593) Pyruvate oxidase {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
>d1pvda3 c.36.1.9 (A:361-556) Pyruvate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2djia3 c.36.1.9 (A:364-592) Pyruvate oxidase {Aerococcus viridans [TaxId: 1377]} Back     information, alignment and structure
>d1ozha3 c.36.1.9 (A:367-558) Catabolic acetolactate synthase {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d1t9ba3 c.36.1.9 (A:461-687) Acetohydroxyacid synthase catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2ihta3 c.36.1.9 (A:375-572) Carboxyethylarginine synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d1q6za3 c.36.1.9 (A:342-524) Benzoylformate decarboxylase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d2ji7a3 c.36.1.9 (A:370-552) Oxalyl-CoA decarboxylase {Oxalobacter formigenes [TaxId: 847]} Back     information, alignment and structure
>d1zpda1 c.31.1.3 (A:188-362) Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 542]} Back     information, alignment and structure
>d1ovma1 c.31.1.3 (A:181-341) Indole-3-pyruvate decarboxylase {Enterobacter cloacae [TaxId: 550]} Back     information, alignment and structure
>d1pvda1 c.31.1.3 (A:182-360) Pyruvate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ybha1 c.31.1.3 (A:281-459) Acetohydroxyacid synthase catalytic subunit {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]} Back     information, alignment and structure
>d2ihta1 c.31.1.3 (A:198-374) Carboxyethylarginine synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d2ez9a1 c.31.1.3 (A:183-365) Pyruvate oxidase {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
>d2djia1 c.31.1.3 (A:187-363) Pyruvate oxidase {Aerococcus viridans [TaxId: 1377]} Back     information, alignment and structure
>d1ozha1 c.31.1.3 (A:188-366) Catabolic acetolactate synthase {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d2ji7a1 c.31.1.3 (A:195-369) Oxalyl-CoA decarboxylase {Oxalobacter formigenes [TaxId: 847]} Back     information, alignment and structure
>d1t9ba1 c.31.1.3 (A:290-460) Acetohydroxyacid synthase catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1q6za1 c.31.1.3 (A:182-341) Benzoylformate decarboxylase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1ytla1 c.31.1.6 (A:17-174) Acetyl-CoA decarbonylase/synthase complex epsilon subunit 2, ACDE2 {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1w85a_ c.36.1.11 (A:) Pyruvate dehydrogenase E1-alpha, PdhA {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1qs0a_ c.36.1.11 (A:) 2-oxoisovalerate dehydrogenase (E1B), PP module {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d2c42a2 c.36.1.12 (A:786-1232) Pyruvate-ferredoxin oxidoreductase, PFOR, domains VI {Desulfovibrio africanus [TaxId: 873]} Back     information, alignment and structure
>d2r8oa2 c.36.1.10 (A:2-332) Transketolase (TK), PP module {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1umda_ c.36.1.11 (A:) Branched-chain alpha-keto acid dehydrogenase, PP module {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2bfda1 c.36.1.11 (A:6-400) Branched-chain alpha-keto acid dehydrogenase, PP module {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2c42a1 c.36.1.8 (A:2-258) Pyruvate-ferredoxin oxidoreductase, PFOR, domain I {Desulfovibrio africanus [TaxId: 873]} Back     information, alignment and structure
>d1r9ja2 c.36.1.10 (A:1-336) Transketolase (TK), PP module {Leishmania mexicana mexicana [TaxId: 44270]} Back     information, alignment and structure
>d1itza1 c.36.1.10 (A:10-347) Transketolase (TK), PP module {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1gpua1 c.36.1.10 (A:3-337) Transketolase (TK), PP module {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2ozla1 c.36.1.11 (A:1-361) E1-beta subunit of pyruvate dehydrogenase (PP module) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ieaa2 c.36.1.10 (A:56-470) Pyruvate dehydrogenase E1 component, PP module {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1t9ba2 c.36.1.5 (A:89-263) Acetohydroxyacid synthase catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ozha2 c.36.1.5 (A:7-187) Catabolic acetolactate synthase {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d2djia2 c.36.1.5 (A:3-186) Pyruvate oxidase {Aerococcus viridans [TaxId: 1377]} Back     information, alignment and structure
>d2ihta2 c.36.1.5 (A:12-197) Carboxyethylarginine synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d1pvda2 c.36.1.5 (A:2-181) Pyruvate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ybha2 c.36.1.5 (A:86-280) Acetohydroxyacid synthase catalytic subunit {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]} Back     information, alignment and structure
>d1zpda2 c.36.1.5 (A:2-187) Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 542]} Back     information, alignment and structure
>d1q6za2 c.36.1.5 (A:2-181) Benzoylformate decarboxylase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d2ez9a2 c.36.1.5 (A:9-182) Pyruvate oxidase {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
>d2ji7a2 c.36.1.5 (A:7-194) Oxalyl-CoA decarboxylase {Oxalobacter formigenes [TaxId: 847]} Back     information, alignment and structure
>d1r9ja1 c.36.1.6 (A:337-526) Transketolase (TK), Pyr module {Leishmania mexicana mexicana [TaxId: 44270]} Back     information, alignment and structure
>d1itza2 c.36.1.6 (A:348-539) Transketolase (TK), Pyr module {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1gpua2 c.36.1.6 (A:338-534) Transketolase (TK), Pyr module {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1t9ba3 c.36.1.9 (A:461-687) Acetohydroxyacid synthase catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2ez9a3 c.36.1.9 (A:366-593) Pyruvate oxidase {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
>d2r8oa1 c.36.1.6 (A:333-527) Transketolase (TK), Pyr module {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2ji7a3 c.36.1.9 (A:370-552) Oxalyl-CoA decarboxylase {Oxalobacter formigenes [TaxId: 847]} Back     information, alignment and structure
>d1ovma2 c.36.1.5 (A:3-180) Indole-3-pyruvate decarboxylase {Enterobacter cloacae [TaxId: 550]} Back     information, alignment and structure
>d1zpda3 c.36.1.9 (A:363-566) Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 542]} Back     information, alignment and structure
>d2djia3 c.36.1.9 (A:364-592) Pyruvate oxidase {Aerococcus viridans [TaxId: 1377]} Back     information, alignment and structure
>d1ozha3 c.36.1.9 (A:367-558) Catabolic acetolactate synthase {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d2ihta3 c.36.1.9 (A:375-572) Carboxyethylarginine synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d1w85a_ c.36.1.11 (A:) Pyruvate dehydrogenase E1-alpha, PdhA {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d2bfda1 c.36.1.11 (A:6-400) Branched-chain alpha-keto acid dehydrogenase, PP module {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1umda_ c.36.1.11 (A:) Branched-chain alpha-keto acid dehydrogenase, PP module {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1qs0a_ c.36.1.11 (A:) 2-oxoisovalerate dehydrogenase (E1B), PP module {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1ybha3 c.36.1.9 (A:460-667) Acetohydroxyacid synthase catalytic subunit {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]} Back     information, alignment and structure
>d2ozla1 c.36.1.11 (A:1-361) E1-beta subunit of pyruvate dehydrogenase (PP module) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ovma3 c.36.1.9 (A:356-551) Indole-3-pyruvate decarboxylase {Enterobacter cloacae [TaxId: 550]} Back     information, alignment and structure
>d1q6za3 c.36.1.9 (A:342-524) Benzoylformate decarboxylase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1pvda3 c.36.1.9 (A:361-556) Pyruvate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1itza2 c.36.1.6 (A:348-539) Transketolase (TK), Pyr module {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1efva2 c.31.1.2 (A:208-331) C-terminal domain of the electron transfer flavoprotein alpha subunit {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1qs0b1 c.36.1.7 (B:2-205) 2-oxoisovalerate dehydrogenase (E1B), Pyr module {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure