Citrus Sinensis ID: 045721

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270---
Protein Sequence
MSGASLAVPRNEKDKTTTTDQNPPPNARQQQAVGGDVMGSLRVIELQLVAFITVFSASGLVPLLDLIFPAFASAYLIALSRLAFPAHGNSSSGSQELFRGGKFFRFYVVVGTTIGLFLPLAYVLGGFARGDEDAVRCTTPHLFLLSFQILTENVISGLSMFSSPVRALVPLLYTVKRLFLIIDWINDAWFNKTLPANAEVKDTAWYWFGRVLAVANLAYFASNLFCFLIPLFLPRAFERYFKERDEIQGKMAEDKRSAAASKSESKPMDKKAD
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccEEEEEHHHHHHHHHHHHHHHHHHccccccHHHHHHcccHHHHHHHHHHHHHHHHHccccccccHHHHccccHHHHHHHHHHHHHHHHHHccccccccccccEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
cccEEEEccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHEEHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHcccHHcccccccccccccccccccc
Coil and Loop (DISEMBL)
msgaslavprnekdkttttdqnpppnarqqqavggdvmGSLRVIELQLVAFITVFSasglvplldlIFPAFASAYLIALSrlafpahgnsssgsqelfrggkFFRFYVVVGTTIGLFLPLAYVlggfargdedavrcttphLFLLSFQILTENVISglsmfsspvralVPLLYTVKRLFLIIDWINDawfnktlpanaevkdTAWYWFGRVLAVANLAYFASNLFCFLIPLFLPRAFERYFKERDEIQGKMAEDKrsaaaskseskpmdkkad
Flexible Loop (DISEMBL)
msgaslavprnekdkttttdqnpppnarqqqaVGGDVMGSLRVIELQLVAFITVFSASGLVPLLDLIFPAFASAYLIALSRLAFPAHGNSSSGSQELFRGGKFFRFYVVVGTTIGLFLPLAYVLGGFARGDEDAVRCTTPHLFLLSFQILTENVISGLSMFSSPVRALVPLLYTVKRLFLIIDWINDAWFNKTLPANAEVKDTAWYWFGRVLAVANLAYFASNLFCFLIPLFLPRAFERYFKERDEIqgkmaedkrsaaaskseskpmdkkad
Low Complexity Region (SEG)
MSGASLAVPRNEKDKTTTTDqnpppnarqqqaVGGDVMGSLRVIELQLVAFITVFSASGLVPLLDLIFPAFASAYLIALSRLAFPAHGNSSSGSQELFRGGKFFRFYVVVGTTIGLFLPLAYVLGGFARGDEDAVRCTTPHLFLLSFQILTENVISGLSMFSSPVRALVPLLYTVKRLFLIIDWINDAWFNKTLPANAEVKDTAWYWFGRVLAVANLAYFASNLFCFLIPLFLPRAFERYFKERDEIQGKMaedkrsaaaskseskPMDKKAD
Disordered region (IsUnstruct)
**********************************GDVMGSLRVIELQLVAFITVFSASGLVPLLDLIFPAFASAYLIALSRLAFPAH********ELFRGGKFFRFYVVVGTTIGLFLPLAYVLGGFARGDEDAVRCTTPHLFLLSFQILTENVISGLSMFSSPVRALVPLLYTVKRLFLIIDWINDAWFNKTLPANAEVKDTAWYWFGRVLAVANLAYFASNLFCFLIPLFLPRAFERYFK*******************************
Disordered Region (DISOPRED)
******************************************VIELQLVAFITVFSASGLVPLLDLIFPAFASAYLIALSRLAFP**************GGKFFRFYVVVGTTIGLFLPLAYVLGGFARGDEDAVRCTTPHLFLLSFQILTENVISGLSMFSSPVRALVPLLYTVKRLFLIIDWINDAWFNKTLPANAEVKDTAWYWFGRVLAVANLAYFASNLFCFLIPLFLPRAFERYF********************************
Disordered Region (DISEMBL)
********************************VGGDVMGSLRVIELQLVAFITVFSASGLVPLLDLIFPAFASAYLIALSRLAFPA*********ELFRGGKFFRFYVVVGTTIGLFLPLAYVLGGFARGDEDAVRCTTPHLFLLSFQILTENVISGLSMFSSPVRALVPLLYTVKRLFLIIDWINDAWFNKTLPANAEVKDTAWYWFGRVLAVANLAYFASNLFCFLIPLFLPRAFERYFKERDEIQ*************************
Disordered Region (DISPRO)
************************************VMGSLRVIELQLVAFITVFSASGLVPLLDLIFPAFASAYLIALSRLAFPAHGNSSSGSQELFRGGKFFRFYVVVGTTIGLFLPLAYVLGGFARGDEDAVRCTTPHLFLLSFQILTENVISGLSMFSSPVRALVPLLYTVKRLFLIIDWINDAWFNKTLPANAEVKDTAWYWFGRVLAVANLAYFASNLFCFLIPLFLPRAFERYFKERD*IQG************************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSGASLAVPRNEKDKTTTTDQNPPPNARQQQAVGGDVMGSLRVIELQLVAFITVFSASGLVPLLDLIFPAFASAYLIALSRLAFPAHGNSSSGSQELFRGGKFFRFYVVVGTTIGLFLPLAYVLGGFARGDEDAVRCTTPHLFLLSFQILTENVISGLSMFSSPVRALVPLLYTVKRLFLIIDWINDAWFNKTLPANAEVKDTAWYWFGRVLAVANLAYFASNLFCFLIPLFLPRAFERYFKERDEIQGKMAEDKRSAAASKSESKPMDKKAD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	273
225468733	279	PREDICTED: uncharacterized protein LOC10	0.992	0.971	0.750	1e-110
255547650	275	conserved hypothetical protein [Ricinus	0.996	0.989	0.702	1e-108
147806249	279	hypothetical protein VITISV_014982 [Viti	0.959	0.939	0.762	1e-108
224072536	274	predicted protein [Populus trichocarpa]	0.978	0.974	0.708	1e-103
449445764	276	PREDICTED: uncharacterized protein LOC10	0.926	0.916	0.706	1e-99
356516399	267	PREDICTED: uncharacterized protein LOC10	0.978	1.0	0.659	2e-96
356508937	277	PREDICTED: uncharacterized protein LOC10	0.978	0.963	0.646	1e-94
297851234	271	hypothetical protein ARALYDRAFT_473001 [	0.985	0.992	0.672	3e-92
357464791	269	hypothetical protein MTR_3g096890 [Medic	0.970	0.985	0.648	8e-92
357464789	311	hypothetical protein MTR_3g096890 [Medic	0.978	0.858	0.643	1e-91

>gi|225468733|ref|XP_002273769.1| PREDICTED: uncharacterized protein LOC100248988 [Vitis vinifera] gi|297738484|emb|CBI27685.3| unnamed protein product [Vitis vinifera]

 Score =  403 bits (1036), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 211/281 (75%), Positives = 235/281 (83%), Gaps = 10/281 (3%)

Query: 1   MSGASLAV-PRNEKDKTTTT-----DQNP-PPNARQQQAVGGDVMGSLRVIELQLVAFIT 53
           MSG SLAV PR E DKTTTT      Q P   N   QQ+V G VMGSLRVIELQLVAFI 
Sbjct: 1   MSGVSLAVAPRTEPDKTTTTPNTKPQQQPGRHNHHHQQSVVGGVMGSLRVIELQLVAFIM 60

Query: 54  VFSASGLVPLLDLIFPAFASAYLIALSRLAFPAHGNSSS-GSQELFRGGKFFRFYVVVGT 112
           VFSASGLVPLLDLIFPAFASAYL+ALSR AFPAHG+++S GS+E+F+G + FR YV+VGT
Sbjct: 61  VFSASGLVPLLDLIFPAFASAYLLALSRFAFPAHGSTTSTGSREIFQGSRLFRLYVIVGT 120

Query: 113 TIGLFLPLAYVLGGFARGDEDAVRCTTPHLFLLSFQILTENVISGLSMFSSPVRALVPLL 172
            IGLFLPLAYVLGGFARGDE AVR  TPHLFLLSFQILTEN+ISGLS+FS PVRALVPLL
Sbjct: 121 AIGLFLPLAYVLGGFARGDEHAVRSATPHLFLLSFQILTENIISGLSLFSPPVRALVPLL 180

Query: 173 YTVKRLFLIIDWINDAWFNKTLPANAEVKDTAWYWFGRVLAVANLAYFASNLFCFLIPLF 232
           YTV+R+F+I+DWI D W NKTLPANA  KD AW+WFG+ LAVANLAYF+ NLF FLIP F
Sbjct: 181 YTVRRIFVIVDWIVDVWLNKTLPANAPFKDVAWFWFGKTLAVANLAYFSINLFVFLIPRF 240

Query: 233 LPRAFERYFKERDEIQGKMAEDKRSAAASKSESKPMDKKAD 273
           LPRAFERYF+ERDE + K+ EDKRSAAA+KS+  P DKKAD
Sbjct: 241 LPRAFERYFRERDETRAKIEEDKRSAAANKSQ--PTDKKAD 279

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255547650|ref|XP_002514882.1| conserved hypothetical protein [Ricinus communis] gi|223545933|gb|EEF47436.1| conserved hypothetical protein [Ricinus communis]

 Score =  397 bits (1019), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 194/276 (70%), Positives = 226/276 (81%), Gaps = 4/276 (1%)

Query: 1   MSGASLA-VPRNEKDKTTTTDQNPPPNA--RQQQAVGGDVMGSLRVIELQLVAFITVFSA 57
           MSG SLA VPRNE    T     P P    +QQQ++ G VMGSLRVIELQLVAFI VFSA
Sbjct: 1   MSGVSLATVPRNEPSDATNDPMKPLPARLDKQQQSMMGGVMGSLRVIELQLVAFIMVFSA 60

Query: 58  SGLVPLLDLIFPAFASAYLIALSRLAFPAHGNSSSGSQELFRGGKFFRFYVVVGTTIGLF 117
           SGLVPL DL+FPAFASAYL+ L+R  FP+HG + +  QE+F+G K FR YVVVGTT+GLF
Sbjct: 61  SGLVPLFDLVFPAFASAYLLVLARFVFPSHGGTRTSPQEIFQGSKLFRLYVVVGTTMGLF 120

Query: 118 LPLAYVLGGFARGDEDAVRCTTPHLFLLSFQILTENVISGLSMFSSPVRALVPLLYTVKR 177
           LPLAYVLGGFARGD+ AVR  TPHLFLLSFQILTEN+ISGLS+FS PVRALVP+LYTV+R
Sbjct: 121 LPLAYVLGGFARGDDHAVRSATPHLFLLSFQILTENIISGLSLFSPPVRALVPMLYTVRR 180

Query: 178 LFLIIDWINDAWFNKTLPANAEVKDTAWYWFGRVLAVANLAYFASNLFCFLIPLFLPRAF 237
           +F+I+DWI D W NKTLPANA+ KD AW+WFGR LA ANL YF+ NLF FLIP FLPRAF
Sbjct: 181 IFVILDWIQDVWINKTLPANAQFKDIAWFWFGRSLAAANLLYFSINLFGFLIPRFLPRAF 240

Query: 238 ERYFKERDEIQGKMAEDKRSAAASKSESKPMDKKAD 273
           E+YF+++DE   KMAEDKRS+AA+ ++S+P DKKAD
Sbjct: 241 EKYFQQKDETHSKMAEDKRSSAAA-NKSQPTDKKAD 275

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147806249|emb|CAN72198.1| hypothetical protein VITISV_014982 [Vitis vinifera]

 Score =  395 bits (1016), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 206/270 (76%), Positives = 227/270 (84%), Gaps = 8/270 (2%)

Query: 1   MSGASLAV-PRNEKDKTTTT-----DQNPP-PNARQQQAVGGDVMGSLRVIELQLVAFIT 53
           MSG SLAV PR E DKTTTT      Q P   N  QQQ+V G VMGSLRVIELQLVAFI 
Sbjct: 1   MSGVSLAVAPRTEPDKTTTTPNTKPQQQPGRHNHHQQQSVVGGVMGSLRVIELQLVAFIM 60

Query: 54  VFSASGLVPLLDLIFPAFASAYLIALSRLAFPAHGNSSS-GSQELFRGGKFFRFYVVVGT 112
           VFSASGLVPLLDLIFPAFASAYL+ALSR AFPAHG+S+S GSQE+F+G + FR YV+VGT
Sbjct: 61  VFSASGLVPLLDLIFPAFASAYLLALSRFAFPAHGSSTSTGSQEIFQGSRLFRLYVIVGT 120

Query: 113 TIGLFLPLAYVLGGFARGDEDAVRCTTPHLFLLSFQILTENVISGLSMFSSPVRALVPLL 172
            IGLFLPLAYVLGGFARGDE AVR  TPHLFLLSFQILTEN+ISGLS+FS PVRALVPLL
Sbjct: 121 AIGLFLPLAYVLGGFARGDEHAVRSATPHLFLLSFQILTENIISGLSLFSPPVRALVPLL 180

Query: 173 YTVKRLFLIIDWINDAWFNKTLPANAEVKDTAWYWFGRVLAVANLAYFASNLFCFLIPLF 232
           YTV+R+F+I+DWI D W NKTLPANA  KD AW+WFG+ LAVANLAYF+ NLF FLIP F
Sbjct: 181 YTVRRIFVIVDWIVDVWLNKTLPANAPFKDVAWFWFGKTLAVANLAYFSINLFVFLIPRF 240

Query: 233 LPRAFERYFKERDEIQGKMAEDKRSAAASK 262
           LPRAFERYF+ERDE + K+ EDKRSAAA+ 
Sbjct: 241 LPRAFERYFRERDETRAKIEEDKRSAAANN 270

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224072536|ref|XP_002303773.1| predicted protein [Populus trichocarpa] gi|222841205|gb|EEE78752.1| predicted protein [Populus trichocarpa]

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 197/278 (70%), Positives = 226/278 (81%), Gaps = 11/278 (3%)

Query: 1   MSGASLAV-PRNEKDKTT---TTDQNPPPNARQQQ--AVGGDVMGSLRVIELQLVAFITV 54
           MSG SLAV P  E + TT   T  Q   P  RQ+Q  ++ G +MGSLRVIELQLVAFI V
Sbjct: 1   MSGVSLAVNPPYEPNGTTVSATKAQQKAPLRRQEQQNSMVGGLMGSLRVIELQLVAFIMV 60

Query: 55  FSASGLVPLLDLIFPAFASAYLIALSRLAFPAHGNSSSGSQELFRGGKFFRFYVVVGTTI 114
           FS SGLVPLLDL+FPAF SAYL+ALSR AFP++G +SSG   +F+G +FFRFYV++GTTI
Sbjct: 61  FSISGLVPLLDLVFPAFTSAYLLALSRFAFPSYGRTSSG---IFQGSRFFRFYVILGTTI 117

Query: 115 GLFLPLAYVLGGFARGDEDAVRCTTPHLFLLSFQILTENVISGLSMFSSPVRALVPLLYT 174
           GLFLPLAYVLGGFARGD+ AVR  TPHLFLLSFQILTEN+ISGLS+FS PVRALVPLLYT
Sbjct: 118 GLFLPLAYVLGGFARGDDQAVRSVTPHLFLLSFQILTENIISGLSLFSPPVRALVPLLYT 177

Query: 175 VKRLFLIIDWINDAWFNKTLPANAEVKDTAWYWFGRVLAVANLAYFASNLFCFLIPLFLP 234
           V+R+F+IIDWIND W  KTLPA A+VKD AWYWFGR LA ANLAYF+ NL  FLIP FLP
Sbjct: 178 VRRIFVIIDWINDVWLTKTLPATAQVKDIAWYWFGRSLAAANLAYFSINLLLFLIPKFLP 237

Query: 235 RAFERYFKERDEIQGKMAEDKRSAAASKSESKPMDKKA 272
           RAFE+YF+E  E + KMAEDKR AAA+K++S   DKKA
Sbjct: 238 RAFEKYFREMGENESKMAEDKRFAAANKTKSA--DKKA 273

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449445764|ref|XP_004140642.1| PREDICTED: uncharacterized protein LOC101203000 [Cucumis sativus] gi|449529784|ref|XP_004171878.1| PREDICTED: uncharacterized LOC101203000 [Cucumis sativus]

 Score =  368 bits (945), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 183/259 (70%), Positives = 211/259 (81%), Gaps = 6/259 (2%)

Query: 20  DQNPPP----NARQQQAVGGDVMGSLRVIELQLVAFITVFSASGLVPLLDLIFPAFASAY 75
            Q  PP    + ++Q  V G VMGSLRVIELQLVAFI VFSASGLVP LDL+FPAF SAY
Sbjct: 19  QQLKPPLRQQHQQEQNTVVGGVMGSLRVIELQLVAFIMVFSASGLVPFLDLVFPAFTSAY 78

Query: 76  LIALSRLAFPAHGNSSSGSQELFRGGKFFRFYVVVGTTIGLFLPLAYVLGGFARGDEDAV 135
           L+ L+R AFP+HG++S+ S E+F+G   FR YVVVGTTIGLFLPLAYVLGGFARGDE AV
Sbjct: 79  LLLLARFAFPSHGHTSTRSPEIFQGSTLFRMYVVVGTTIGLFLPLAYVLGGFARGDEHAV 138

Query: 136 RCTTPHLFLLSFQILTENVISGLSMFSSPVRALVPLLYTVKRLFLIIDWINDAWFNKTLP 195
           R  TPHLFLLSFQILTENVISGLS+FS PVRALVPLLYTV+R+F+I+DW+ D W NK+LP
Sbjct: 139 RSATPHLFLLSFQILTENVISGLSLFSPPVRALVPLLYTVRRIFVIMDWMKDVWLNKSLP 198

Query: 196 ANAEVKDTAWYWFGRVLAVANLAYFASNLFCFLIPLFLPRAFERYFKER-DEIQGKMAED 254
           ANA +KD  W+WFGR LAVAN AYF  NLF FLIP FLPRAFE+YFKER DE   K  ED
Sbjct: 199 ANAPIKDIGWFWFGRTLAVANFAYFCINLFGFLIPRFLPRAFEKYFKERDDESHAKFHED 258

Query: 255 KRSAAASKSESKPMDKKAD 273
           K S+AA+ ++S+P DKK+D
Sbjct: 259 KLSSAAA-AKSQPSDKKSD 276

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356516399|ref|XP_003526882.1| PREDICTED: uncharacterized protein LOC100778708 [Glycine max]

 Score =  358 bits (919), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 180/273 (65%), Positives = 212/273 (77%), Gaps = 6/273 (2%)

Query: 1   MSGASLAVPRNEKDKTTTTDQNPPPNARQQQAVGGDVMGSLRVIELQLVAFITVFSASGL 60
           MSG SLAV       T        P  R +QA  G +MGSLRVIELQLVAFI VFSASGL
Sbjct: 1   MSGVSLAV-SGPPAATVAEAAGTKPKRRTEQAPMGGMMGSLRVIELQLVAFILVFSASGL 59

Query: 61  VPLLDLIFPAFASAYLIALSRLAFPAHGNSSSGSQELFRGGKFFRFYVVVGTTIGLFLPL 120
           VPLLDL+FPAFASAY++ALS+ AFP   ++SS   E+F+G + FR YVV GTT+GLFLPL
Sbjct: 60  VPLLDLVFPAFASAYILALSQFAFP---SASSSGTEIFKGSRLFRMYVVFGTTVGLFLPL 116

Query: 121 AYVLGGFARGDEDAVRCTTPHLFLLSFQILTENVISGLSMFSSPVRALVPLLYTVKRLFL 180
           AYVLGGFARGDE AVR  TPHLFLLSFQILTEN+I GLS+FS PVRALVP++YT++R+F+
Sbjct: 117 AYVLGGFARGDEHAVRSATPHLFLLSFQILTENIIGGLSLFSPPVRALVPIIYTIRRIFV 176

Query: 181 IIDWINDAWFNKTLPANAEVKDTAWYWFGRVLAVANLAYFASNLFCFLIPLFLPRAFERY 240
            IDWI+D W NKTLP NA+ +D AWYWFG+ LAVANLAYF+ NLF FLIP FLPRAFERY
Sbjct: 177 DIDWIHDVWLNKTLPVNAKFQDLAWYWFGKGLAVANLAYFSINLFGFLIPRFLPRAFERY 236

Query: 241 FKERDEIQGKMAEDKRSAAASKSESKPMDKKAD 273
           F+E+ EI  K AEDKRS   ++++    +KK D
Sbjct: 237 FQEKGEIYTKSAEDKRSVVVNRTQLS--EKKTD 267

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356508937|ref|XP_003523209.1| PREDICTED: uncharacterized protein LOC100816629 [Glycine max]

 Score =  352 bits (902), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 183/283 (64%), Positives = 215/283 (75%), Gaps = 16/283 (5%)

Query: 1   MSGASLAVPRNEKDKTTTTDQNPP-----PNARQQQAVGGDVMGSLRVIELQLVAFITVF 55
           MSG SLAV        +  +QN P     P  R +QA  G +MGSLRVIELQLVAFI VF
Sbjct: 1   MSGVSLAV---SHPPASVGEQNVPQAGTKPKPRTEQAPIGGMMGSLRVIELQLVAFILVF 57

Query: 56  SASGLVPLLDLIFPAFASAYLIALSRLAFPAHGNSSSGS-----QELFRGGKFFRFYVVV 110
           SASGLVPLLDL+FPA ASAY++ALS  AFP+  +SS+ S      E+F+GG+ FR YVVV
Sbjct: 58  SASGLVPLLDLVFPALASAYILALSLFAFPSSSSSSTRSLHDSGTEIFKGGRLFRMYVVV 117

Query: 111 GTTIGLFLPLAYVLGGFARGDEDAVRCTTPHLFLLSFQILTENVISGLSMFSSPVRALVP 170
           G T+GLFLPLAYVLGGFARGDE AVR  TPHLFLLSFQILTEN+I GLSMFS PVRALVP
Sbjct: 118 GITVGLFLPLAYVLGGFARGDEHAVRSATPHLFLLSFQILTENIIGGLSMFSPPVRALVP 177

Query: 171 LLYTVKRLFLIIDWINDAWFNKTLPANAEVKDTAWYWFGRVLAVANLAYFASNLFCFLIP 230
           ++YTV+R+F+ IDWI+D W NKTLP NA  +D AWYWFG+ LAVANLAYF+ NLF FLIP
Sbjct: 178 MIYTVRRIFVDIDWIHDVWLNKTLPVNATFQDLAWYWFGKGLAVANLAYFSINLFGFLIP 237

Query: 231 LFLPRAFERYFKERDEIQGKMAEDKRSAAASKSESKPMDKKAD 273
            FLPRAFERYF+++ EI  K AEDKR    +K++   + +K D
Sbjct: 238 RFLPRAFERYFQDKGEIYAKSAEDKRPVVVNKTQ---LSEKKD 277

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297851234|ref|XP_002893498.1| hypothetical protein ARALYDRAFT_473001 [Arabidopsis lyrata subsp. lyrata] gi|297339340|gb|EFH69757.1| hypothetical protein ARALYDRAFT_473001 [Arabidopsis lyrata subsp. lyrata]

 Score =  343 bits (881), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 185/275 (67%), Positives = 209/275 (76%), Gaps = 6/275 (2%)

Query: 1   MSGASLAV-PRNEKDKT-TTTDQNPPPNARQQQAVGGDVMGSLRVIELQLVAFITVFSAS 58
           MSG SLAV PRN+ DKT +++++             G +MGSLRVIELQLVAFI VFSAS
Sbjct: 1   MSGVSLAVGPRNDVDKTASSSEKGRWSGMTAIGGGSGGLMGSLRVIELQLVAFILVFSAS 60

Query: 59  GLVPLLDLIFPAFASAYLIALSRLAFPAHGNSSSGSQELFRGGKFFRFYVVVGTTIGLFL 118
           GLVP+LD++FPAFAS Y+IALSRLAFP+HG S+S S E+FRG K FR YV+ GTTIGLFL
Sbjct: 61  GLVPILDMLFPAFASVYIIALSRLAFPSHGVSTS-SPEIFRGSKLFRMYVISGTTIGLFL 119

Query: 119 PLAYVLGGFARGDEDAVRCTTPHLFLLSFQILTENVISGLSMFSSPVRALVPLLYTVKRL 178
           PLAYVLGGFARGD+ AVR  TPHLFLLS QILTENVISGLS+FS PVRALVPLLYTV R+
Sbjct: 120 PLAYVLGGFARGDDQAVRSATPHLFLLSCQILTENVISGLSLFSPPVRALVPLLYTVWRI 179

Query: 179 FLIIDWINDAWFNKTLPANAEVKDTAWYWFGRVLAVANLAYFASNLFCFLIPLFLPRAFE 238
           F+II W  D W NK+LP NA     AW+WFGR LA+ANL YF  NL CFLIP FLPRAFE
Sbjct: 180 FVIIGWSKDVWLNKSLPINATPNVVAWFWFGRYLAIANLGYFGVNLLCFLIPRFLPRAFE 239

Query: 239 RYFKERDEIQGKMAEDKRSAAASKSESKPMDKKAD 273
            YF+ERDEI  K  EDK         SKP D K+D
Sbjct: 240 IYFRERDEIMSKCQEDK---PVQVPRSKPSDHKSD 271

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357464791|ref|XP_003602677.1| hypothetical protein MTR_3g096890 [Medicago truncatula] gi|358348422|ref|XP_003638246.1| hypothetical protein MTR_122s0069 [Medicago truncatula] gi|355491725|gb|AES72928.1| hypothetical protein MTR_3g096890 [Medicago truncatula] gi|355504181|gb|AES85384.1| hypothetical protein MTR_122s0069 [Medicago truncatula]

 Score =  342 bits (878), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 177/273 (64%), Positives = 209/273 (76%), Gaps = 8/273 (2%)

Query: 1   MSGASLAVPRNEKDKTTTTDQNPPPNARQQQAVGGDVMGSLRVIELQLVAFITVFSASGL 60
           MSG S+A       +T  T  N     R +    G +MGSLRVIELQLVAFI VFSASGL
Sbjct: 1   MSGVSVATAPPTAPQTPGTKAN----QRSEAPSAGGMMGSLRVIELQLVAFILVFSASGL 56

Query: 61  VPLLDLIFPAFASAYLIALSRLAFPAHGNSSSG--SQELFRGGKFFRFYVVVGTTIGLFL 118
           VPLLDL+FPA ASAY++AL+R AFP+  +++S    QE+F+    FR Y++VGTTIGLFL
Sbjct: 57  VPLLDLVFPALASAYILALARYAFPSSPSTTSNSQQQEIFQVSSMFRMYIIVGTTIGLFL 116

Query: 119 PLAYVLGGFARGDEDAVRCTTPHLFLLSFQILTENVISGLSMFSSPVRALVPLLYTVKRL 178
           PLAYVLGGFARGD+ AVR  TPHLFLLSFQILTEN+IS LS+FS PVRALVP++YT++R+
Sbjct: 117 PLAYVLGGFARGDQHAVRSATPHLFLLSFQILTENIISSLSLFSPPVRALVPMIYTIRRI 176

Query: 179 FLIIDWINDAWFNKTLPANAEVKDTAWYWFGRVLAVANLAYFASNLFCFLIPLFLPRAFE 238
           F+ IDWIND W NKT PANA  +DTAWYWFG+ LAVANLAYF+ NL  FLIP FLPRAFE
Sbjct: 177 FVDIDWINDVWLNKTFPANARFQDTAWYWFGKGLAVANLAYFSINLCVFLIPRFLPRAFE 236

Query: 239 RYFKERDEIQGKMAEDKRSAAASKSE--SKPMD 269
           RYF+ER EI  K AEDKRS + +K +   K MD
Sbjct: 237 RYFQERGEIYAKSAEDKRSVSLNKPQLSEKKMD 269

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357464789|ref|XP_003602676.1| hypothetical protein MTR_3g096890 [Medicago truncatula] gi|355491724|gb|AES72927.1| hypothetical protein MTR_3g096890 [Medicago truncatula]

 Score =  342 bits (877), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 177/275 (64%), Positives = 210/275 (76%), Gaps = 8/275 (2%)

Query: 1   MSGASLAVPRNEKDKTTTTDQNPPPNARQQQAVGGDVMGSLRVIELQLVAFITVFSASGL 60
           MSG S+A       +T  T  N     R +    G +MGSLRVIELQLVAFI VFSASGL
Sbjct: 43  MSGVSVATAPPTAPQTPGTKAN----QRSEAPSAGGMMGSLRVIELQLVAFILVFSASGL 98

Query: 61  VPLLDLIFPAFASAYLIALSRLAFPAHGNSSS--GSQELFRGGKFFRFYVVVGTTIGLFL 118
           VPLLDL+FPA ASAY++AL+R AFP+  +++S    QE+F+    FR Y++VGTTIGLFL
Sbjct: 99  VPLLDLVFPALASAYILALARYAFPSSPSTTSNSQQQEIFQVSSMFRMYIIVGTTIGLFL 158

Query: 119 PLAYVLGGFARGDEDAVRCTTPHLFLLSFQILTENVISGLSMFSSPVRALVPLLYTVKRL 178
           PLAYVLGGFARGD+ AVR  TPHLFLLSFQILTEN+IS LS+FS PVRALVP++YT++R+
Sbjct: 159 PLAYVLGGFARGDQHAVRSATPHLFLLSFQILTENIISSLSLFSPPVRALVPMIYTIRRI 218

Query: 179 FLIIDWINDAWFNKTLPANAEVKDTAWYWFGRVLAVANLAYFASNLFCFLIPLFLPRAFE 238
           F+ IDWIND W NKT PANA  +DTAWYWFG+ LAVANLAYF+ NL  FLIP FLPRAFE
Sbjct: 219 FVDIDWINDVWLNKTFPANARFQDTAWYWFGKGLAVANLAYFSINLCVFLIPRFLPRAFE 278

Query: 239 RYFKERDEIQGKMAEDKRSAAASKSESKPMDKKAD 273
           RYF+ER EI  K AEDKRS + +K +    +KK D
Sbjct: 279 RYFQERGEIYAKSAEDKRSVSLNKPQLS--EKKMD 311

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	273
TAIR|locus:2010419	271	AT1G27990 "AT1G27990" [Arabido	0.912	0.918	0.694	6e-87
TAIR|locus:2156702	242	AT5G52420 "AT5G52420" [Arabido	0.743	0.838	0.357	1.1e-32
TAIR|locus:2172878	229	AT5G23920 "AT5G23920" [Arabido	0.688	0.820	0.35	1.8e-23

TAIR|locus:2010419 AT1G27990 "AT1G27990" [Arabidopsis thaliana (taxid:3702)]

 Score = 869 (311.0 bits), Expect = 6.0e-87, P = 6.0e-87
 Identities = 175/252 (69%), Positives = 197/252 (78%)

Query:     1 MSGASLAV-PRNEKDKTTTTDXXXXXXXXXXXXVG-GDVMGSLRVIELQLVAFITVFSAS 58
             MSG SLAV PR + DKT ++              G G +MGSLRVIELQLVAFI VFSAS
Sbjct:     1 MSGVSLAVGPRTDVDKTASSSEKGRWSGMTAIGGGSGGLMGSLRVIELQLVAFILVFSAS 60

Query:    59 GLVPLLDLIFPAFASAYLIALSRLAFPAHGNSSSGSQELFRGGKFFRFYVVVGTTIGLFL 118
             GLVP+LD++FPAFAS Y+IALSRLAFP+HG S++ S E+FRG K FR YV+ GTTIGLFL
Sbjct:    61 GLVPILDMLFPAFASIYIIALSRLAFPSHGVSTA-SPEVFRGSKLFRLYVISGTTIGLFL 119

Query:   119 PLAYVLGGFARGDEDAVRCTTPHLFLLSFQILTENVISGLSMFSSPVRALVPLLYTVKRL 178
             PLAYVLGGFARGD+ AVR  TPHLFLLS QILTENVISGLS+FS PVRALVPLLYTV R+
Sbjct:   120 PLAYVLGGFARGDDHAVRSATPHLFLLSCQILTENVISGLSLFSPPVRALVPLLYTVWRI 179

Query:   179 FLIIDWINDAWFNKTLPANAEVKDTAWYWFGRVLAVANLAYFASNLFCFLIPLFLPRAFE 238
             F+II W  D WFNK+LP NA      W+WFGR LA+ANL YF  NL CFLIP FLPRAFE
Sbjct:   180 FVIIGWSKDVWFNKSLPINATPNVVTWFWFGRYLALANLGYFGVNLLCFLIPRFLPRAFE 239

Query:   239 RYFKERDEIQGK 250
             +YF+ERDEI  K
Sbjct:   240 QYFRERDEILAK 251

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2156702 AT5G52420 "AT5G52420" [Arabidopsis thaliana (taxid:3702)]

 Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
 Identities = 74/207 (35%), Positives = 111/207 (53%)

Query:    35 GDVMGSLRVIELQLVAFITVFSASGLVPLLDLIFPAFASAYLIALSRLAFPAHGNSSSGS 94
             G   G     +L ++A I V SASGLV + D IF      Y   LS+L FP H N +  +
Sbjct:    34 GKPAGFFSFRQLNILAIIIVLSASGLVTIQDFIFTILTLIYFFFLSKLIFPPHNNPNRDA 93

Query:    95 QELFRGGKFFRFYVVVGTTIGLFLPLAYVLGGFARGDEDAVRCTTPHLFLLSFQILTENV 154
                    K FR YV     +GL +P+ Y+  G    D++ V    PH+FLL+ QI  E +
Sbjct:    94 PLTSSTNKIFRIYVTAAGIVGLIIPICYIFEGIVEDDKNGVSAAAPHVFLLASQIFMEGL 153

Query:   155 ISGLSMFSSPVRALVPLLYTVKRLFLIIDWINDAWFNKTLPANAEVKDTAWYWFGRVLAV 214
              +    FS+P R LVP++Y  +R+  +++WI   +  + +      +     + G+VLA 
Sbjct:   154 ATMFG-FSAPARILVPIVYNARRVLTLVEWIMSEFSREDVTGTVSARRM---YAGKVLAA 209

Query:   215 ANLAYFASNLFCFLIPLFLPRAFERYF 241
             ANL  ++ NLF  LIP++LPRAF+RY+
Sbjct:   210 ANLGIWSFNLFGVLIPVYLPRAFKRYY 236

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IDA

TAIR|locus:2172878 AT5G23920 "AT5G23920" [Arabidopsis thaliana (taxid:3702)]

 Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
 Identities = 70/200 (35%), Positives = 102/200 (51%)

Query:    45 ELQLVAFITVFSASGLVPLLDLIFPAFASAYLIA-LSRLAFPAHGNSSSGSQELFRG-GK 102
             +L  ++F+ + +A GLV + ++ F      YL   LSR AFP     +   + L     K
Sbjct:    32 QLVFLSFMILLAAKGLVGIGEIAFVILCYIYLYEFLSRFAFPR--KQTEQKKRLSNPKNK 89

Query:   103 FFRFYVVVGTTIGLFLPLAYVLGGFARGDEDAVRCTTPHLFLLSFQILTENVISGLS-MF 161
              F+ Y +    IGL  PL Y+  G  RGD        PHLFLLS Q  TE +  G S  +
Sbjct:    90 LFQAYFLATAIIGLLFPLCYIGDGIYRGDIHGAGAAAPHLFLLSGQAFTEPI--GFSDKY 147

Query:   162 SSPVRALVPLLYTVKRLFLIIDWINDAWFNKTLPANAEVKDTAWYWFGRVLAVANLAYFA 221
             S P+  L P+ Y  +R+F ++DW+  A F+ T      ++     + GRV+A  N   + 
Sbjct:   148 SMPIGILGPVFYNARRIFALLDWVK-AEFSDTQRPGGPLR----LYGGRVIASVNTVMWF 202

Query:   222 SNLFCFLIPLFLPRAFERYF 241
              NLF  L+P+FLPR+ E YF
Sbjct:   203 YNLFGLLLPVFLPRSCEIYF 222


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.327   0.141   0.430    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      273       246    0.0010  113 3  11 22  0.49    32
                                                     32  0.46    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  609 (65 KB)
  Total size of DFA:  169 KB (2098 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  19.17u 0.09s 19.26t   Elapsed:  00:00:01
  Total cpu time:  19.17u 0.09s 19.26t   Elapsed:  00:00:01
  Start:  Fri May 10 02:15:06 2013   End:  Fri May 10 02:15:07 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005773 "vacuole" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	273
KOG0873	283	consensus C-4 sterol methyl oxidase [Lipid transpo	82.26

>KOG0873 consensus C-4 sterol methyl oxidase [Lipid transport and metabolism]

Probab=82.26  E-value=1.2  Score=42.60  Aligned_cols=40  Identities=23%  Similarity=0.302  Sum_probs=34.7

Q ss_pred             cccee-eehhhHHHHHHHHHHHHhhhHhhhhhcc-hHHHHHH
Q 045721          201 KDTAW-YWFGRVLAVANLAYFASNLFCFLIPLFL-PRAFERY  240 (273)
Q Consensus       201 ~~~~w-~~fGR~LAvANl~yw~~NLFgFLiP~fL-PrAf~rY  240 (273)
                      +|+-| .+.+-...+++++||++||+.++|=+.. |+.|+||
T Consensus        23 ~~d~~l~~~~~~~~~~~~~y~l~~lpf~~iD~t~~~~~~~rY   64 (283)
T KOG0873|consen   23 SGDFLLLCVGGPFIVHELVYWLFCLPFIFIDVTNRPPFLRRY   64 (283)
T ss_pred             CCceEEEeechhHHHHHHHHHHhcchheEeecccCcchhhhh
Confidence            34456 7777778899999999999999999888 9999999

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00