Citrus Sinensis ID: 047572
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 595 | 2.2.26 [Sep-21-2011] | |||||||
| Q39161 | 586 | Ferredoxin--nitrite reduc | yes | no | 0.981 | 0.996 | 0.808 | 0.0 | |
| P38500 | 583 | Ferredoxin--nitrite reduc | N/A | no | 0.976 | 0.996 | 0.822 | 0.0 | |
| P05314 | 594 | Ferredoxin--nitrite reduc | N/A | no | 0.934 | 0.936 | 0.826 | 0.0 | |
| P17847 | 569 | Ferredoxin--nitrite reduc | N/A | no | 0.936 | 0.978 | 0.780 | 0.0 | |
| Q42997 | 596 | Ferredoxin--nitrite reduc | yes | no | 0.978 | 0.976 | 0.752 | 0.0 | |
| Q51879 | 510 | Ferredoxin--nitrite reduc | N/A | no | 0.825 | 0.962 | 0.497 | 1e-147 | |
| P39661 | 512 | Ferredoxin--nitrite reduc | yes | no | 0.838 | 0.974 | 0.514 | 1e-146 | |
| Q73YC1 | 555 | Sulfite reductase [ferred | N/A | no | 0.786 | 0.843 | 0.321 | 2e-57 | |
| Q73XV0 | 555 | Sulfite reductase [ferred | N/A | no | 0.783 | 0.839 | 0.316 | 1e-54 | |
| P71753 | 555 | Sulfite reductase [ferred | yes | no | 0.836 | 0.897 | 0.303 | 3e-53 |
| >sp|Q39161|NIR_ARATH Ferredoxin--nitrite reductase, chloroplastic OS=Arabidopsis thaliana GN=NIR1 PE=1 SV=1 | Back alignment and function desciption |
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Score = 1004 bits (2597), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/591 (80%), Positives = 530/591 (89%), Gaps = 7/591 (1%)
Query: 6 SSFSVRFASPLLPSPAAATSASPKTWRVHATTPAVAPVTTTSAPEVDAERLEPRVEERDG 65
+SFS+ F SPLLPS +S PK + A AP +T++ VDA+RLEPRVE +DG
Sbjct: 2 TSFSLTFTSPLLPS----SSTKPKRSVLVAAAQTTAPAESTAS--VDADRLEPRVELKDG 55
Query: 66 YFVLKEKFRKGINPQEKVKIEKEPMKLFMENGIEDLAKLSMEEIDQAKNTKDDIDVRLKW 125
+F+LKEKFRKGINPQEKVKIE+EPMKLFMENGIE+LAK SMEE+D K++KDDIDVRLKW
Sbjct: 56 FFILKEKFRKGINPQEKVKIEREPMKLFMENGIEELAKKSMEELDSEKSSKDDIDVRLKW 115
Query: 126 LGLFHRRKHHYGRFMMRLKLPNGVTTSEQTRYLASVIKKYGKDGCADVTTRQNWQIRGVV 185
LGLFHRRKH YG+FMMRLKLPNGVTTS QTRYLASVI+KYG+DGCADVTTRQNWQIRGVV
Sbjct: 116 LGLFHRRKHQYGKFMMRLKLPNGVTTSAQTRYLASVIRKYGEDGCADVTTRQNWQIRGVV 175
Query: 186 LPDVPEILKGLAQVGLTSLQSGMDNVRNPVGNPLAGIDPEEIVDTRPYTNLLSHFITANA 245
LPDVPEILKGLA VGLTSLQSGMDNVRNPVGNP+AGIDPEEIVDTRPYTNLLS FITAN+
Sbjct: 176 LPDVPEILKGLASVGLTSLQSGMDNVRNPVGNPIAGIDPEEIVDTRPYTNLLSQFITANS 235
Query: 246 QGNPTVTNLPRKWNVCVVGSHDLYEHPHINDLAYMPATKDGRFGFNLLVGGFFSPKRCAE 305
QGNP TNLPRKWNVCVVG+HDLYEHPHINDLAYMPA KDGRFGFNLLVGGFFSPKRC E
Sbjct: 236 QGNPDFTNLPRKWNVCVVGTHDLYEHPHINDLAYMPANKDGRFGFNLLVGGFFSPKRCEE 295
Query: 306 AIPLDAWVAADDVIPVCKAVLEAYRDLGFRGNRQKTRMMWLIDELGIEGFRAEVVKRMPG 365
AIPLDAWV ADDV+P+CKAVLEAYRDLG RGNRQKTRMMWLIDELG+EGFR EV KRMP
Sbjct: 296 AIPLDAWVPADDVLPLCKAVLEAYRDLGTRGNRQKTRMMWLIDELGVEGFRTEVEKRMPN 355
Query: 366 QELDRGSSEDLVQRQWDRRDYLGVYPQKQEGFSYVGLHIPVGRVQADDMDELARLADAYG 425
+L+RGSSEDLV +QW+RRDY GV PQKQEG S+VGLH+PVGR+QADDMDELARLAD YG
Sbjct: 356 GKLERGSSEDLVNKQWERRDYFGVNPQKQEGLSFVGLHVPVGRLQADDMDELARLADTYG 415
Query: 426 SGELRLTVEQNIIIPNVDNSKLEALLKEPLLE-KFSPQPSILMKGLVACTGNQFCGQAII 484
SGELRLTVEQNIIIPNV+ SK EALL+EP L+ +FSP+PSILMKGLVACTG+QFCGQAII
Sbjct: 416 SGELRLTVEQNIIIPNVETSKTEALLQEPFLKNRFSPEPSILMKGLVACTGSQFCGQAII 475
Query: 485 ETKARALKVTKEVERLVDVTKPVRMHWTGCPNSCAQVQVADIGFMGCMTRDEDGKTCEGA 544
ETK RALKVT+EVERLV V +P+RMHWTGCPN+C QVQVADIGFMGC+TR E+GK EGA
Sbjct: 476 ETKLRALKVTEEVERLVSVPRPIRMHWTGCPNTCGQVQVADIGFMGCLTRGEEGKPVEGA 535
Query: 545 DVFLGGRIGSDSHLGDIYKKGVPCKDLVPLVADILVEHFGAVLREREEAED 595
DV++GGRIGSDSH+G+IYKKGV +LVPLVA+IL++ FGAV REREE ED
Sbjct: 536 DVYVGGRIGSDSHIGEIYKKGVRVTELVPLVAEILIKEFGAVPREREENED 586
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Catalyzes the six-electron reduction of nitrite to ammonium. Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 7EC: .EC: 7EC: .EC: 1 |
| >sp|P38500|NIR_BETPN Ferredoxin--nitrite reductase, chloroplastic OS=Betula pendula GN=NIR1 PE=2 SV=1 | Back alignment and function description |
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| >sp|P05314|NIR_SPIOL Ferredoxin--nitrite reductase, chloroplastic OS=Spinacia oleracea GN=NIR PE=1 SV=1 | Back alignment and function description |
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| >sp|P17847|NIR_MAIZE Ferredoxin--nitrite reductase, chloroplastic (Fragment) OS=Zea mays GN=NIR PE=2 SV=1 | Back alignment and function description |
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| >sp|Q42997|NIR_ORYSJ Ferredoxin--nitrite reductase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0357100 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q51879|NIR_PHOLA Ferredoxin--nitrite reductase OS=Phormidium laminosum GN=nirA PE=3 SV=1 | Back alignment and function description |
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| >sp|P39661|NIR_SYNE7 Ferredoxin--nitrite reductase OS=Synechococcus elongatus (strain PCC 7942) GN=nirA PE=3 SV=1 | Back alignment and function description |
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| >sp|Q73YC1|SIR1_MYCPA Sulfite reductase [ferredoxin] 1 OS=Mycobacterium paratuberculosis (strain ATCC BAA-968 / K-10) GN=sir1 PE=3 SV=1 | Back alignment and function description |
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| >sp|Q73XV0|SIR2_MYCPA Sulfite reductase [ferredoxin] 2 OS=Mycobacterium paratuberculosis (strain ATCC BAA-968 / K-10) GN=sir2 PE=3 SV=1 | Back alignment and function description |
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| >sp|P71753|SIR_MYCTU Sulfite reductase [ferredoxin] OS=Mycobacterium tuberculosis GN=sir PE=1 SV=2 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 595 | ||||||
| 255555453 | 587 | Ferredoxin--nitrite reductase, chloropla | 0.979 | 0.993 | 0.838 | 0.0 | |
| 300119952 | 588 | nitrite reductase protein [Gossypium hir | 0.983 | 0.994 | 0.834 | 0.0 | |
| 224123494 | 588 | predicted protein [Populus trichocarpa] | 0.984 | 0.996 | 0.832 | 0.0 | |
| 118487557 | 588 | unknown [Populus trichocarpa] | 0.984 | 0.996 | 0.832 | 0.0 | |
| 46367705 | 587 | nitrite reductase [Nicotiana tabacum] | 0.983 | 0.996 | 0.815 | 0.0 | |
| 357475367 | 582 | Ferredoxin-nitrite reductase [Medicago t | 0.974 | 0.996 | 0.815 | 0.0 | |
| 356521508 | 588 | PREDICTED: ferredoxin--nitrite reductase | 0.984 | 0.996 | 0.815 | 0.0 | |
| 356500029 | 605 | PREDICTED: ferredoxin--nitrite reductase | 0.993 | 0.976 | 0.818 | 0.0 | |
| 46367703 | 584 | nitrite reductase [Nicotiana tabacum] | 0.978 | 0.996 | 0.812 | 0.0 | |
| 327198781 | 587 | nitrite reductase [Solanum tuberosum] | 0.984 | 0.998 | 0.806 | 0.0 |
| >gi|255555453|ref|XP_002518763.1| Ferredoxin--nitrite reductase, chloroplast precursor, putative [Ricinus communis] gi|223542144|gb|EEF43688.1| Ferredoxin--nitrite reductase, chloroplast precursor, putative [Ricinus communis] | Back alignment and taxonomy information |
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Score = 1038 bits (2684), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 498/594 (83%), Positives = 543/594 (91%), Gaps = 11/594 (1%)
Query: 5 SSSFSVRFASPLLPSPAAATSASP-KTWRVHATTPAVA-PVTTTSAPEVDAERLEPRVEE 62
SS SVR SP P ++ S P ++ R+ A P V PV +VDAERLEPRVEE
Sbjct: 2 SSLPSVRLLSP----PLSSHSTRPTRSTRIFAAGPTVVQPVEV----QVDAERLEPRVEE 53
Query: 63 RDGYFVLKEKFRKGINPQEKVKIEKEPMKLFMENGIEDLAKLSMEEIDQAKNTKDDIDVR 122
+DGYFVLKEKFR+GINPQEKVKIEKEPMKLFMENGIE+LAKLSMEEIDQ K TKDDIDVR
Sbjct: 54 KDGYFVLKEKFRQGINPQEKVKIEKEPMKLFMENGIEELAKLSMEEIDQNKLTKDDIDVR 113
Query: 123 LKWLGLFHRRKHHYGRFMMRLKLPNGVTTSEQTRYLASVIKKYGKDGCADVTTRQNWQIR 182
LKWLGLFHRRK YGRFMMRLKLPNGVTTSEQTRYLASVI+KYGKDGCADVTTRQNWQIR
Sbjct: 114 LKWLGLFHRRKQQYGRFMMRLKLPNGVTTSEQTRYLASVIRKYGKDGCADVTTRQNWQIR 173
Query: 183 GVVLPDVPEILKGLAQVGLTSLQSGMDNVRNPVGNPLAGIDPEEIVDTRPYTNLLSHFIT 242
GVVL DVP+ILKGLA+VGLTSLQSGMDNVRNPVGNPLAGIDPEEIVDTRPYTNLL+ F+T
Sbjct: 174 GVVLSDVPDILKGLAEVGLTSLQSGMDNVRNPVGNPLAGIDPEEIVDTRPYTNLLTQFLT 233
Query: 243 ANAQGNPTVTNLPRKWNVCVVGSHDLYEHPHINDLAYMPATKDGRFGFNLLVGGFFSPKR 302
+N+QGNP V+NLPRKWNVCV+GSHDLYEHPHINDLAYMPATKDGRFGFNLLVGGFFS KR
Sbjct: 234 SNSQGNPAVSNLPRKWNVCVIGSHDLYEHPHINDLAYMPATKDGRFGFNLLVGGFFSAKR 293
Query: 303 CAEAIPLDAWVAADDVIPVCKAVLEAYRDLGFRGNRQKTRMMWLIDELGIEGFRAEVVKR 362
CAEAIPLDAWV+ADDVIPVCKAVLEAYRDLGFRGNRQKTRMMWLIDE+G+EGFR+EV +R
Sbjct: 294 CAEAIPLDAWVSADDVIPVCKAVLEAYRDLGFRGNRQKTRMMWLIDEIGLEGFRSEVERR 353
Query: 363 MPGQELDRGSSEDLVQRQWDRRDYLGVYPQKQEGFSYVGLHIPVGRVQADDMDELARLAD 422
MP Q+L+R SSEDLVQ+QW+RRDY GV+PQ QEGFSYVG+HIPVGRVQADDMDELARLAD
Sbjct: 354 MPQQKLERASSEDLVQKQWERRDYFGVHPQSQEGFSYVGIHIPVGRVQADDMDELARLAD 413
Query: 423 AYGSGELRLTVEQNIIIPNVDNSKLEALLKEPLLE-KFSPQPSILMKGLVACTGNQFCGQ 481
YGSGELRLTVEQNIIIPN++NSK+EALL+EPLL+ KFSP+P ILMKGLVACTGN+FCGQ
Sbjct: 414 TYGSGELRLTVEQNIIIPNIENSKIEALLQEPLLKHKFSPEPPILMKGLVACTGNEFCGQ 473
Query: 482 AIIETKARALKVTKEVERLVDVTKPVRMHWTGCPNSCAQVQVADIGFMGCMTRDEDGKTC 541
AIIETKARA+KVT+EV+RLV VT+PVRMHWTGCPN+C QVQVADIGFMGCMTRDE+GK C
Sbjct: 474 AIIETKARAMKVTEEVQRLVSVTQPVRMHWTGCPNTCGQVQVADIGFMGCMTRDENGKVC 533
Query: 542 EGADVFLGGRIGSDSHLGDIYKKGVPCKDLVPLVADILVEHFGAVLREREEAED 595
EG DVFLGGRIGSDSHLGD+YKK VPCK+LVPLV DILV +FGAV REREE ED
Sbjct: 534 EGVDVFLGGRIGSDSHLGDVYKKSVPCKNLVPLVVDILVNNFGAVPREREELED 587
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|300119952|gb|ADJ68001.1| nitrite reductase protein [Gossypium hirsutum] | Back alignment and taxonomy information |
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| >gi|224123494|ref|XP_002330328.1| predicted protein [Populus trichocarpa] gi|222871363|gb|EEF08494.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|118487557|gb|ABK95605.1| unknown [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|46367705|dbj|BAD15365.1| nitrite reductase [Nicotiana tabacum] | Back alignment and taxonomy information |
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| >gi|357475367|ref|XP_003607969.1| Ferredoxin-nitrite reductase [Medicago truncatula] gi|355509024|gb|AES90166.1| Ferredoxin-nitrite reductase [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|356521508|ref|XP_003529397.1| PREDICTED: ferredoxin--nitrite reductase, chloroplastic-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|356500029|ref|XP_003518837.1| PREDICTED: ferredoxin--nitrite reductase, chloroplastic [Glycine max] | Back alignment and taxonomy information |
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| >gi|46367703|dbj|BAD15364.1| nitrite reductase [Nicotiana tabacum] | Back alignment and taxonomy information |
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| >gi|327198781|emb|CBL43265.1| nitrite reductase [Solanum tuberosum] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 595 | ||||||
| TAIR|locus:2053654 | 586 | NIR1 "nitrite reductase 1" [Ar | 0.914 | 0.928 | 0.829 | 7.9e-252 | |
| UNIPROTKB|Q81T46 | 540 | BAS1333 "Putative sulfite redu | 0.811 | 0.894 | 0.343 | 3.6e-73 | |
| TIGR_CMR|BA_1443 | 540 | BA_1443 "nitrite reductase" [B | 0.811 | 0.894 | 0.343 | 3.6e-73 | |
| UNIPROTKB|P71753 | 555 | sir "Sulfite reductase [ferred | 0.860 | 0.922 | 0.3 | 1.2e-51 | |
| TIGR_CMR|SPO_2634 | 554 | SPO_2634 "sulfite reductase, p | 0.363 | 0.389 | 0.327 | 2.7e-37 | |
| UNIPROTKB|Q4KCU2 | 557 | cysI_1 "Sulfite reductase (NAD | 0.410 | 0.438 | 0.290 | 4.4e-36 | |
| UNIPROTKB|Q48IH0 | 552 | cysI "Sulfite reductase (NADPH | 0.410 | 0.442 | 0.311 | 7.4e-36 | |
| UNIPROTKB|Q4KAG6 | 552 | cysI_2 "Sulfite reductase (NAD | 0.366 | 0.394 | 0.302 | 3.2e-34 | |
| UNIPROTKB|Q0C5D8 | 552 | HNE_0325 "Putative sulfite red | 0.371 | 0.400 | 0.292 | 3.2e-34 | |
| UNIPROTKB|O82802 | 693 | SIR1 "Sulfite reductase 1 [fer | 0.601 | 0.516 | 0.268 | 1.9e-21 |
| TAIR|locus:2053654 NIR1 "nitrite reductase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2425 (858.7 bits), Expect = 7.9e-252, P = 7.9e-252
Identities = 452/545 (82%), Positives = 494/545 (90%)
Query: 52 DAERLEPRVEERDGYFVLKEKFRKGINPQEKVKIEKEPMKLFMENGIEDLAKLSMEEIDQ 111
DA+RLEPRVE +DG+F+LKEKFRKGINPQEKVKIE+EPMKLFMENGIE+LAK SMEE+D
Sbjct: 42 DADRLEPRVELKDGFFILKEKFRKGINPQEKVKIEREPMKLFMENGIEELAKKSMEELDS 101
Query: 112 AKNTKDDIDVRLKWLGLFHRRKHHYGRFMMRLKLPNGVTTSEQTRYLASVIKKYGKDGCA 171
K++KDDIDVRLKWLGLFHRRKH YG+FMMRLKLPNGVTTS QTRYLASVI+KYG+DGCA
Sbjct: 102 EKSSKDDIDVRLKWLGLFHRRKHQYGKFMMRLKLPNGVTTSAQTRYLASVIRKYGEDGCA 161
Query: 172 DVTTRQNWQIRGVVLPDVPEILKGLAQVGLTSLQSGMDNVRNPVGNPLAGIDPEEIVDTR 231
DVTTRQNWQIRGVVLPDVPEILKGLA VGLTSLQSGMDNVRNPVGNP+AGIDPEEIVDTR
Sbjct: 162 DVTTRQNWQIRGVVLPDVPEILKGLASVGLTSLQSGMDNVRNPVGNPIAGIDPEEIVDTR 221
Query: 232 PYTNLLSHFITANAQGNPTVTNLPRKWNVCVVGSHDLYEHPHINDLAYMPATKDGRFGFN 291
PYTNLLS FITAN+QGNP TNLPRKWNVCVVG+HDLYEHPHINDLAYMPA KDGRFGFN
Sbjct: 222 PYTNLLSQFITANSQGNPDFTNLPRKWNVCVVGTHDLYEHPHINDLAYMPANKDGRFGFN 281
Query: 292 LLVGGFFSPKRCAEAIPLDAWVAADDVIPVCKAVLEAYRDLGFRGNRQKTRMMWLIDELG 351
LLVGGFFSPKRC EAIPLDAWV ADDV+P+CKAVLEAYRDLG RGNRQKTRMMWLIDELG
Sbjct: 282 LLVGGFFSPKRCEEAIPLDAWVPADDVLPLCKAVLEAYRDLGTRGNRQKTRMMWLIDELG 341
Query: 352 IEGFRAEVVKRMPGQELDRGSSEDLVQRQWDRRDYLGVYPQKQEGFSYVGLHIPVGRVQA 411
+EGFR EV KRMP +L+RGSSEDLV +QW+RRDY GV PQKQEG S+VGLH+PVGR+QA
Sbjct: 342 VEGFRTEVEKRMPNGKLERGSSEDLVNKQWERRDYFGVNPQKQEGLSFVGLHVPVGRLQA 401
Query: 412 DDMDELARLADAYGSGELRLTVEQNIIIPNVDNSXXXXXXXX-XXXXXFSPQPSILMKGL 470
DDMDELARLAD YGSGELRLTVEQNIIIPNV+ S FSP+PSILMKGL
Sbjct: 402 DDMDELARLADTYGSGELRLTVEQNIIIPNVETSKTEALLQEPFLKNRFSPEPSILMKGL 461
Query: 471 VACTGNQFCGQAIIETKARALKVTKEVERLVDVTKPVRMHWTGCPNSCAQVQVADIGFMG 530
VACTG+QFCGQAIIETK RALKVT+EVERLV V +P+RMHWTGCPN+C QVQVADIGFMG
Sbjct: 462 VACTGSQFCGQAIIETKLRALKVTEEVERLVSVPRPIRMHWTGCPNTCGQVQVADIGFMG 521
Query: 531 CMTRDEDGKTCEGADVFLGGRIGSDSHLGDIYKKGVPCKDLVPLVADILVEHFGAVLRER 590
C+TR E+GK EGADV++GGRIGSDSH+G+IYKKGV +LVPLVA+IL++ FGAV RER
Sbjct: 522 CLTRGEEGKPVEGADVYVGGRIGSDSHIGEIYKKGVRVTELVPLVAEILIKEFGAVPRER 581
Query: 591 EEAED 595
EE ED
Sbjct: 582 EENED 586
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| UNIPROTKB|Q81T46 BAS1333 "Putative sulfite reductase" [Bacillus anthracis (taxid:1392)] | Back alignment and assigned GO terms |
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| TIGR_CMR|BA_1443 BA_1443 "nitrite reductase" [Bacillus anthracis str. Ames (taxid:198094)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P71753 sir "Sulfite reductase [ferredoxin]" [Mycobacterium tuberculosis (taxid:1773)] | Back alignment and assigned GO terms |
|---|
| TIGR_CMR|SPO_2634 SPO_2634 "sulfite reductase, putative" [Ruegeria pomeroyi DSS-3 (taxid:246200)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q4KCU2 cysI_1 "Sulfite reductase (NADPH) hemoprotein, beta-component" [Pseudomonas protegens Pf-5 (taxid:220664)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q48IH0 cysI "Sulfite reductase (NADPH) hemoprotein, beta-component" [Pseudomonas syringae pv. phaseolicola 1448A (taxid:264730)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q4KAG6 cysI_2 "Sulfite reductase (NADPH) hemoprotein, beta-component" [Pseudomonas protegens Pf-5 (taxid:220664)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q0C5D8 HNE_0325 "Putative sulfite reductase" [Hyphomonas neptunium ATCC 15444 (taxid:228405)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|O82802 SIR1 "Sulfite reductase 1 [ferredoxin], chloroplastic" [Nicotiana tabacum (taxid:4097)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| P71753 | SIR_MYCTU | 1, ., 8, ., 7, ., 1 | 0.3033 | 0.8369 | 0.8972 | yes | no |
| Q39161 | NIR_ARATH | 1, ., 7, ., 7, ., 1 | 0.8087 | 0.9815 | 0.9965 | yes | no |
| P38500 | NIR_BETPN | 1, ., 7, ., 7, ., 1 | 0.8223 | 0.9764 | 0.9965 | N/A | no |
| P17847 | NIR_MAIZE | 1, ., 7, ., 7, ., 1 | 0.7803 | 0.9361 | 0.9789 | N/A | no |
| Q7TYP6 | SIR_MYCBO | 1, ., 8, ., 7, ., 1 | 0.3033 | 0.8369 | 0.8972 | yes | no |
| Q42997 | NIR_ORYSJ | 1, ., 7, ., 7, ., 1 | 0.7525 | 0.9781 | 0.9765 | yes | no |
| P05314 | NIR_SPIOL | 1, ., 7, ., 7, ., 1 | 0.8264 | 0.9344 | 0.9360 | N/A | no |
| P39661 | NIR_SYNE7 | 1, ., 7, ., 7, ., 1 | 0.5146 | 0.8386 | 0.9746 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 1.7.7 | 0.998 |
| 4th Layer | 1.7.7.1 | 0.994 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | estExt_fgenesh4_pm.C_1300024 | SubName- Full=Putative uncharacterized protein; (588 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
 | estExt_fgenesh4_pg.C_LG_V0917 | • | • | • | 0.927 | ||||||
 | eugene3.00020821 | • | • | • | 0.927 | ||||||
 | estExt_fgenesh4_pg.C_LG_XIX0409 | • | • | 0.913 | |||||||
 | estExt_fgenesh4_pg.C_LG_VII0739 | • | • | 0.913 | |||||||
 | eugene3.00130573 | • | • | 0.913 | |||||||
 | eugene3.00150904 | • | • | 0.912 | |||||||
 | estExt_fgenesh4_pg.C_1220090 | • | • | 0.912 | |||||||
 | estExt_fgenesh4_pg.C_2320019 | • | • | 0.912 | |||||||
 | estExt_Genewise1_v1.C_LG_V3325 | • | • | 0.912 | |||||||
 | estExt_Genewise1_v1.C_LG_II2125 | • | • | 0.912 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 595 | |||
| PLN02431 | 587 | PLN02431, PLN02431, ferredoxin--nitrite reductase | 0.0 | |
| PRK09566 | 513 | PRK09566, nirA, ferredoxin-nitrite reductase; Revi | 0.0 | |
| COG0155 | 510 | COG0155, CysI, Sulfite reductase, beta subunit (he | 1e-133 | |
| PRK09567 | 593 | PRK09567, nirA, ferredoxin-nitrite reductase; Revi | 1e-103 | |
| TIGR02435 | 390 | TIGR02435, CobG, precorrin-3B synthase | 8e-51 | |
| PRK13504 | 569 | PRK13504, PRK13504, sulfite reductase subunit beta | 6e-49 | |
| pfam01077 | 154 | pfam01077, NIR_SIR, Nitrite and sulphite reductase | 2e-41 | |
| TIGR02041 | 541 | TIGR02041, CysI, sulfite reductase (NADPH) hemopro | 9e-31 | |
| PLN00178 | 623 | PLN00178, PLN00178, sulfite reductase | 9e-28 | |
| TIGR02042 | 577 | TIGR02042, sir, ferredoxin-sulfite reductase | 7e-25 | |
| pfam03460 | 67 | pfam03460, NIR_SIR_ferr, Nitrite/Sulfite reductase | 9e-19 | |
| COG2221 | 317 | COG2221, DsrA, Dissimilatory sulfite reductase (de | 6e-18 | |
| pfam03460 | 67 | pfam03460, NIR_SIR_ferr, Nitrite/Sulfite reductase | 3e-16 | |
| TIGR02912 | 314 | TIGR02912, sulfite_red_C, sulfite reductase, subun | 4e-13 | |
| COG2221 | 317 | COG2221, DsrA, Dissimilatory sulfite reductase (de | 4e-11 | |
| pfam01077 | 154 | pfam01077, NIR_SIR, Nitrite and sulphite reductase | 2e-09 | |
| COG1251 | 793 | COG1251, NirB, NAD(P)H-nitrite reductase [Energy p | 2e-09 | |
| TIGR02374 | 785 | TIGR02374, nitri_red_nirB, nitrite reductase [NAD( | 4e-05 | |
| TIGR02066 | 341 | TIGR02066, dsrB, sulfite reductase, dissimilatory- | 3e-04 | |
| COG1251 | 793 | COG1251, NirB, NAD(P)H-nitrite reductase [Energy p | 0.002 |
| >gnl|CDD|178050 PLN02431, PLN02431, ferredoxin--nitrite reductase | Back alignment and domain information |
|---|
Score = 1137 bits (2942), Expect = 0.0
Identities = 469/590 (79%), Positives = 520/590 (88%), Gaps = 4/590 (0%)
Query: 1 MSSSSSSFSVRFASPLLPSPAAA-TSASPKTWRVHATTPAVAPVTTTSAPEVDAERLEPR 59
+ SS F +S LL S +A SA R A V+P + VDA+RLEPR
Sbjct: 1 SAMSSFRFLCTLSSTLLRSTSARRVSAVRAVEREVAAAATVSP---PATAAVDADRLEPR 57
Query: 60 VEERDGYFVLKEKFRKGINPQEKVKIEKEPMKLFMENGIEDLAKLSMEEIDQAKNTKDDI 119
VEERDGY+VLKE+FRKGINPQEKVK+EKEPMKLFMENGIE+LAK EEID++K +KDDI
Sbjct: 58 VEERDGYWVLKEEFRKGINPQEKVKLEKEPMKLFMENGIEELAKTPFEEIDKSKLSKDDI 117
Query: 120 DVRLKWLGLFHRRKHHYGRFMMRLKLPNGVTTSEQTRYLASVIKKYGKDGCADVTTRQNW 179
DVRLKWLGLFHRRKH YGRFMMRLKLPNGVTTS QTRYLASVI+KYG+DGCADVTTRQNW
Sbjct: 118 DVRLKWLGLFHRRKHQYGRFMMRLKLPNGVTTSAQTRYLASVIEKYGEDGCADVTTRQNW 177
Query: 180 QIRGVVLPDVPEILKGLAQVGLTSLQSGMDNVRNPVGNPLAGIDPEEIVDTRPYTNLLSH 239
QIRGVVLPDVP ILKGL +VGLTSLQSGMDNVRNPVGNPLAGIDP EIVDTRPYTNLLS
Sbjct: 178 QIRGVVLPDVPAILKGLEEVGLTSLQSGMDNVRNPVGNPLAGIDPHEIVDTRPYTNLLSD 237
Query: 240 FITANAQGNPTVTNLPRKWNVCVVGSHDLYEHPHINDLAYMPATKDGRFGFNLLVGGFFS 299
+IT N +GNP +TNLPRKWNVCVVGSHDL+EHPHINDLAYMPATKDGRFGFNLLVGGFFS
Sbjct: 238 YITNNGRGNPEITNLPRKWNVCVVGSHDLFEHPHINDLAYMPATKDGRFGFNLLVGGFFS 297
Query: 300 PKRCAEAIPLDAWVAADDVIPVCKAVLEAYRDLGFRGNRQKTRMMWLIDELGIEGFRAEV 359
PKRCAEAIPLDAWV ADDV+P+CKA+LEA+RDLG RGNRQKTRMMWLIDELG+EGFR+EV
Sbjct: 298 PKRCAEAIPLDAWVPADDVVPLCKAILEAFRDLGTRGNRQKTRMMWLIDELGVEGFRSEV 357
Query: 360 VKRMPGQELDRGSSEDLVQRQWDRRDYLGVYPQKQEGFSYVGLHIPVGRVQADDMDELAR 419
KRMP EL+R +SEDLV ++W+RRDYLGV+PQKQEG SYVGLH+PVGR+QA DMDELAR
Sbjct: 358 EKRMPNGELERAASEDLVDKKWERRDYLGVHPQKQEGLSYVGLHVPVGRLQAADMDELAR 417
Query: 420 LADAYGSGELRLTVEQNIIIPNVDNSKLEALLKEPLLEKFSPQPSILMKGLVACTGNQFC 479
LAD YGSGELRLTVEQNIIIPNV NSK+EALL EPLL++FSP P +L+KGLVACTGNQFC
Sbjct: 418 LADEYGSGELRLTVEQNIIIPNVPNSKVEALLAEPLLQRFSPNPGLLLKGLVACTGNQFC 477
Query: 480 GQAIIETKARALKVTKEVERLVDVTKPVRMHWTGCPNSCAQVQVADIGFMGCMTRDEDGK 539
GQAIIETKARALKVT+E+ERLV+V +PVRMHWTGCPNSC QVQVADIGFMGCM RDE+GK
Sbjct: 478 GQAIIETKARALKVTEELERLVEVPRPVRMHWTGCPNSCGQVQVADIGFMGCMARDENGK 537
Query: 540 TCEGADVFLGGRIGSDSHLGDIYKKGVPCKDLVPLVADILVEHFGAVLRE 589
EGAD+F+GGR+GSDSHL + YKKGVPC +LVP+VADIL+E FGA RE
Sbjct: 538 AVEGADIFVGGRVGSDSHLAEEYKKGVPCDELVPVVADILIEEFGAKERE 587
|
Length = 587 |
| >gnl|CDD|236572 PRK09566, nirA, ferredoxin-nitrite reductase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|223233 COG0155, CysI, Sulfite reductase, beta subunit (hemoprotein) [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|236573 PRK09567, nirA, ferredoxin-nitrite reductase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|233866 TIGR02435, CobG, precorrin-3B synthase | Back alignment and domain information |
|---|
| >gnl|CDD|237402 PRK13504, PRK13504, sulfite reductase subunit beta; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|216287 pfam01077, NIR_SIR, Nitrite and sulphite reductase 4Fe-4S domain | Back alignment and domain information |
|---|
| >gnl|CDD|131096 TIGR02041, CysI, sulfite reductase (NADPH) hemoprotein, beta-component | Back alignment and domain information |
|---|
| >gnl|CDD|177773 PLN00178, PLN00178, sulfite reductase | Back alignment and domain information |
|---|
| >gnl|CDD|131097 TIGR02042, sir, ferredoxin-sulfite reductase | Back alignment and domain information |
|---|
| >gnl|CDD|217572 pfam03460, NIR_SIR_ferr, Nitrite/Sulfite reductase ferredoxin-like half domain | Back alignment and domain information |
|---|
| >gnl|CDD|225131 COG2221, DsrA, Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits [Energy production and conversion] | Back alignment and domain information |
|---|
| >gnl|CDD|217572 pfam03460, NIR_SIR_ferr, Nitrite/Sulfite reductase ferredoxin-like half domain | Back alignment and domain information |
|---|
| >gnl|CDD|131958 TIGR02912, sulfite_red_C, sulfite reductase, subunit C | Back alignment and domain information |
|---|
| >gnl|CDD|225131 COG2221, DsrA, Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits [Energy production and conversion] | Back alignment and domain information |
|---|
| >gnl|CDD|216287 pfam01077, NIR_SIR, Nitrite and sulphite reductase 4Fe-4S domain | Back alignment and domain information |
|---|
| >gnl|CDD|224171 COG1251, NirB, NAD(P)H-nitrite reductase [Energy production and conversion] | Back alignment and domain information |
|---|
| >gnl|CDD|162827 TIGR02374, nitri_red_nirB, nitrite reductase [NAD(P)H], large subunit | Back alignment and domain information |
|---|
| >gnl|CDD|131121 TIGR02066, dsrB, sulfite reductase, dissimilatory-type beta subunit | Back alignment and domain information |
|---|
| >gnl|CDD|224171 COG1251, NirB, NAD(P)H-nitrite reductase [Energy production and conversion] | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 595 | |||
| PLN02431 | 587 | ferredoxin--nitrite reductase | 100.0 | |
| PRK09567 | 593 | nirA ferredoxin-nitrite reductase; Reviewed | 100.0 | |
| PRK09566 | 513 | nirA ferredoxin-nitrite reductase; Reviewed | 100.0 | |
| PLN00178 | 623 | sulfite reductase | 100.0 | |
| TIGR02042 | 577 | sir ferredoxin-sulfite reductase. monomeric enzyme | 100.0 | |
| PRK13504 | 569 | sulfite reductase subunit beta; Provisional | 100.0 | |
| TIGR02041 | 541 | CysI sulfite reductase (NADPH) hemoprotein, beta-c | 100.0 | |
| COG0155 | 510 | CysI Sulfite reductase, beta subunit (hemoprotein) | 100.0 | |
| KOG0560 | 638 | consensus Sulfite reductase (ferredoxin) [Inorgani | 100.0 | |
| TIGR02435 | 390 | CobG precorrin-3B synthase. An iron-sulfur protein | 100.0 | |
| TIGR02066 | 341 | dsrB sulfite reductase, dissimilatory-type beta su | 100.0 | |
| COG2221 | 317 | DsrA Dissimilatory sulfite reductase (desulfovirid | 100.0 | |
| PRK14989 | 847 | nitrite reductase subunit NirD; Provisional | 100.0 | |
| TIGR02374 | 785 | nitri_red_nirB nitrite reductase [NAD(P)H], large | 100.0 | |
| TIGR02912 | 314 | sulfite_red_C sulfite reductase, subunit C. Member | 100.0 | |
| TIGR02064 | 402 | dsrA sulfite reductase, dissimilatory-type alpha s | 100.0 | |
| PRK09567 | 593 | nirA ferredoxin-nitrite reductase; Reviewed | 100.0 | |
| PRK09566 | 513 | nirA ferredoxin-nitrite reductase; Reviewed | 100.0 | |
| TIGR02066 | 341 | dsrB sulfite reductase, dissimilatory-type beta su | 100.0 | |
| TIGR02374 | 785 | nitri_red_nirB nitrite reductase [NAD(P)H], large | 100.0 | |
| PRK14989 | 847 | nitrite reductase subunit NirD; Provisional | 100.0 | |
| PLN02431 | 587 | ferredoxin--nitrite reductase | 100.0 | |
| COG2221 | 317 | DsrA Dissimilatory sulfite reductase (desulfovirid | 100.0 | |
| TIGR02042 | 577 | sir ferredoxin-sulfite reductase. monomeric enzyme | 100.0 | |
| PRK13504 | 569 | sulfite reductase subunit beta; Provisional | 100.0 | |
| TIGR02041 | 541 | CysI sulfite reductase (NADPH) hemoprotein, beta-c | 100.0 | |
| PLN00178 | 623 | sulfite reductase | 100.0 | |
| TIGR02064 | 402 | dsrA sulfite reductase, dissimilatory-type alpha s | 99.98 | |
| TIGR02435 | 390 | CobG precorrin-3B synthase. An iron-sulfur protein | 99.97 | |
| PF01077 | 157 | NIR_SIR: Nitrite and sulphite reductase 4Fe-4S dom | 99.97 | |
| TIGR02912 | 314 | sulfite_red_C sulfite reductase, subunit C. Member | 99.97 | |
| COG0155 | 510 | CysI Sulfite reductase, beta subunit (hemoprotein) | 99.94 | |
| COG1251 | 793 | NirB NAD(P)H-nitrite reductase [Energy production | 99.94 | |
| PF01077 | 157 | NIR_SIR: Nitrite and sulphite reductase 4Fe-4S dom | 99.89 | |
| COG1251 | 793 | NirB NAD(P)H-nitrite reductase [Energy production | 99.88 | |
| KOG0560 | 638 | consensus Sulfite reductase (ferredoxin) [Inorgani | 99.79 | |
| PF03460 | 69 | NIR_SIR_ferr: Nitrite/Sulfite reductase ferredoxin | 99.63 | |
| PF03460 | 69 | NIR_SIR_ferr: Nitrite/Sulfite reductase ferredoxin | 99.6 | |
| PRK00366 | 360 | ispG 4-hydroxy-3-methylbut-2-en-1-yl diphosphate s | 99.0 | |
| PRK00366 | 360 | ispG 4-hydroxy-3-methylbut-2-en-1-yl diphosphate s | 98.87 | |
| PF04551 | 359 | GcpE: GcpE protein; InterPro: IPR004588 This prote | 97.23 | |
| PF04551 | 359 | GcpE: GcpE protein; InterPro: IPR004588 This prote | 96.96 | |
| TIGR00612 | 346 | ispG_gcpE 1-hydroxy-2-methyl-2-(E)-butenyl 4-dipho | 96.83 | |
| COG0821 | 361 | gcpE 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphat | 96.66 | |
| TIGR00612 | 346 | ispG_gcpE 1-hydroxy-2-methyl-2-(E)-butenyl 4-dipho | 96.52 | |
| COG0821 | 361 | gcpE 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphat | 96.34 | |
| PLN02925 | 733 | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha | 95.56 | |
| PRK00694 | 606 | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha | 94.11 | |
| PRK02048 | 611 | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha | 93.91 | |
| cd01916 | 731 | ACS_1 Acetyl-CoA synthase (ACS), also known as ace | 93.82 | |
| PLN02925 | 733 | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha | 93.71 | |
| cd01916 | 731 | ACS_1 Acetyl-CoA synthase (ACS), also known as ace | 91.28 | |
| PRK00694 | 606 | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha | 86.98 | |
| PRK00941 | 781 | acetyl-CoA decarbonylase/synthase complex subunit | 86.2 | |
| PRK02048 | 611 | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha | 83.86 | |
| PRK00941 | 781 | acetyl-CoA decarbonylase/synthase complex subunit | 80.72 |
| >PLN02431 ferredoxin--nitrite reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-127 Score=1066.08 Aligned_cols=552 Identities=83% Similarity=1.361 Sum_probs=508.6
Q ss_pred eeccCCCcCCCCcCCCccccccccCccccccCceeeecccccCCCChhhhhhcccCCcccccccchHHHHhhhhhhcccc
Q 047572 33 VHATTPAVAPVTTTSAPEVDAERLEPRVEERDGYFVLKEKFRKGINPQEKVKIEKEPMKLFMENGIEDLAKLSMEEIDQA 112 (595)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~E~~K~~~~~l~~~~~~~i~~~a~~~~~~~~~~ 112 (595)
.++++++++|+ ++++|.+.+++|++.+.+|+|.|+++.++++|++|++|.|++||++++.++|++||+.+|++|+..
T Consensus 34 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ln~~E~~K~~~~~~~~~~~~~i~~~a~~g~~~i~~~ 110 (587)
T PLN02431 34 EVAAAATVSPP---ATAAVDADRLEPRVEERDGYWVLKEEFRKGINPQEKVKLEKEPMKLFMENGIEELAKTPFEEIDKS 110 (587)
T ss_pred cccCCcccCcc---ccccccccccCccccCCCCceeechhhcccCCHHHHhhcccCcccccchhhHHHHHhcChhhcCcc
Confidence 34555555554 557899999999999999999999888999999999999999999985357999999998887743
Q ss_pred cCCchhHHHHHhhcccceecccCCCeEEEEEecCCCccCHHHHHHHHHHHHHhCCCCeEEecCCCceEEecCCCCCHHHH
Q 047572 113 KNTKDDIDVRLKWLGLFHRRKHHYGRFMMRLKLPNGVTTSEQTRYLASVIKKYGKDGCADVTTRQNWQIRGVVLPDVPEI 192 (595)
Q Consensus 113 ~~~~~d~~~rlk~~G~y~~~~~~~~~fmvRvripgG~lt~~Qlr~la~iA~~yG~~G~l~iTtRq~iql~gI~~~~l~~i 192 (595)
..++||++.||||+|+|+|+++++++||||||+|+|.||++||+.||+||++||.+|++|||||||||||||+.+|++++
T Consensus 111 ~~~~~d~~~r~kw~Gl~~~~~~~~~~fMlRvRiPgG~lt~~Qlr~la~ia~~yg~~G~i~iTtRqniQl~gI~~ed~p~i 190 (587)
T PLN02431 111 KLSKDDIDVRLKWLGLFHRRKHQYGRFMMRLKLPNGVTTSAQTRYLASVIEKYGEDGCADVTTRQNWQIRGVVLPDVPAI 190 (587)
T ss_pred cCChHHHHhhhhheeeeeecCCCCCceEEEEecCCcccCHHHHHHHHHHHHHhCCCCeEEEecCcceEeCCCCHHHHHHH
Confidence 45569999999999999998888999999999999999999999999999999944899999999999999999999999
Q ss_pred HHHHHHcCCcccCCCCCCcCceecCCCCCCCCCCccChHHHHHHHHHHHHhccCCCCCccCCCCceEEEEecCCCCCCcC
Q 047572 193 LKGLAQVGLTSLQSGMDNVRNPVGNPLAGIDPEEIVDTRPYTNLLSHFITANAQGNPTVTNLPRKWNVCVVGSHDLYEHP 272 (595)
Q Consensus 193 ~~~L~~~GL~t~~a~gd~~RnI~~cP~ag~~~~~~~dt~~la~~l~~~~~~~~~~~~~~~~LPrKfkI~isgc~~~c~~~ 272 (595)
+++|+++||++.++|||++|||++||++|+|+++++||++|+++|+++|.+.+.+||++.+|||||||+|+||+++|+++
T Consensus 191 ~~~L~~vGL~t~~a~gd~vRNI~~~P~aG~~~~e~~Dt~pla~~l~~~~~~~~~~~~~~~~LPrKfkiavsG~~~~~~~~ 270 (587)
T PLN02431 191 LKGLEEVGLTSLQSGMDNVRNPVGNPLAGIDPHEIVDTRPYTNLLSDYITNNGRGNPEITNLPRKWNVCVVGSHDLFEHP 270 (587)
T ss_pred HHHHHHcCCCchhccCCCCCCcccCCCCCCCccccccHHHHHHHHHHHhhhcccCCcccccCCCCeEEEEecCccccccc
Confidence 99999999999999999999999999999999999999999999999998766679999999999999999999999999
Q ss_pred ccCceEEEeEeecCceeEEEEEcCcCCCccccccccccccCChhcHHHHHHHHHHHHHHhccCCCccchhhHHHHHhhCh
Q 047572 273 HINDLAYMPATKDGRFGFNLLVGGFFSPKRCAEAIPLDAWVAADDVIPVCKAVLEAYRDLGFRGNRQKTRMMWLIDELGI 352 (595)
Q Consensus 273 ~~~DIg~v~~~~~g~~gf~v~vGG~~g~~~~~~~~~l~~~v~~eev~~~~~ail~~~rd~g~r~~R~kaRl~~li~~~G~ 352 (595)
.+|||||+++.++|+.||+|+|||++|.++...+..++.||++||+++++++|+++|+++|+|++|+|+||+|+|++||+
T Consensus 271 ~~nDigf~~~~~~g~~Gf~v~vGG~~g~~~~~~~~~l~~~v~~e~v~~v~~av~~~f~d~G~R~~R~kaRlk~li~~~G~ 350 (587)
T PLN02431 271 HINDLAYMPATKDGRFGFNLLVGGFFSPKRCAEAIPLDAWVPADDVVPLCKAILEAFRDLGTRGNRQKTRMMWLIDELGV 350 (587)
T ss_pred cccceEEEEEEECCceEEEEEEeCCcCCCCccccchhhcccCHHHHHHHHHHHHHHHHHhCCccchhhhHHHHHHHHhhH
Confidence 99999999998888889999999999977656777889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhCCCCCCCCCCCchhhhcccCCCCccceeecccCCeEEEEEEcCCcccCHHHHHHHHHHHHHhCCCeEEEc
Q 047572 353 EGFRAEVVKRMPGQELDRGSSEDLVQRQWDRRDYLGVYPQKQEGFSYVGLHIPVGRVQADDMDELARLADAYGSGELRLT 432 (595)
Q Consensus 353 e~f~~~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~Gv~~qk~~G~~~v~i~vp~Grl~a~ql~~La~iA~~yg~g~irlT 432 (595)
|+|+++|+++++..+|+.....+.+.+.|.+++|+|||+|+++|+|||++++|+|+|+++||+.||++|++||+|+||||
T Consensus 351 e~f~~~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~Gv~~Qk~~G~~~v~v~vp~Grlt~~qL~~LA~lA~~yG~g~irlT 430 (587)
T PLN02431 351 EGFRSEVEKRMPNGELERAASEDLVDKKWERRDYLGVHPQKQEGLSYVGLHVPVGRLQAADMDELARLADEYGSGELRLT 430 (587)
T ss_pred HHHHHHHHHHhccCCCCcccccccccchhcccceeEEEeeccCCeEEEEEEcCCCCCCHHHHHHHHHHHHHhCCCeEEEc
Confidence 99999999988645676554433323457788999999999999999999999999999999999999999999999999
Q ss_pred CCCceEeeccChhhHHHHHHhhhcCCCCCCCCCCccceeecCCccccchhhhHHHHHHHHHHHHHHhhhcCCCCceEeee
Q 047572 433 VEQNIIIPNVDNSKLEALLKEPLLEKFSPQPSILMKGLVACTGNQFCGQAIIETKARALKVTKEVERLVDVTKPVRMHWT 512 (595)
Q Consensus 433 ~~Qni~l~~I~~~~v~~l~~el~~~g~~~~~~~~~r~v~AC~G~~~C~~a~~et~~~a~~l~~~l~~~~~lp~~~kI~iS 512 (595)
+||||+|+||+.++++++++++...++...+++.+++++||+|+++|+++++||++++.+|.++|.+.+.+|++++||||
T Consensus 431 ~~Qni~i~~V~~~~v~~l~~~l~~~g~~~~~~~~~r~vvACtG~~~C~~ai~eTk~~A~~L~~~l~~~~~lp~k~kI~vS 510 (587)
T PLN02431 431 VEQNIIIPNVPNSKVEALLAEPLLQRFSPNPGLLLKGLVACTGNQFCGQAIIETKARALKVTEELERLVEVPRPVRMHWT 510 (587)
T ss_pred CCCCEEECCCCHHHHHHHHHHHHhcCCCCCCCCCccceeECCCccccCccHHHHHHHHHHHHHHHHHhhcCCCCeEEEEE
Confidence 99999999999999999999987677877888899999999999999999999999999999999877889999999999
Q ss_pred cCCCCCcccccCcEEEEeEeeecCCCceeccEEEEEcCcCCCCCcccccccCCCCccCHHHHHHHHHHHHHHhHh
Q 047572 513 GCPNSCAQVQVADIGFMGCMTRDEDGKTCEGADVFLGGRIGSDSHLGDIYKKGVPCKDLVPLVADILVEHFGAVL 587 (595)
Q Consensus 513 GCpn~Ca~~~~aDIGlvG~~~~~~~G~~~~gy~I~lGG~~g~~~~lg~~~~~~v~~eel~~~l~~ll~~~~~~~~ 587 (595)
||||+|++|+++||||+|+..++.+|+.++||+||+||+.|.++++|+.+..+|+++||+++++++|.+||++..
T Consensus 511 GCpn~C~~~~iaDIG~vG~~~~~~~g~~v~gf~V~lGG~~G~~~~~g~~l~~~Vp~eel~~~v~~il~~~~~~~~ 585 (587)
T PLN02431 511 GCPNSCGQVQVADIGFMGCMARDENGKAVEGADIFVGGRVGSDSHLAEEYKKGVPCDELVPVVADILIEEFGAKE 585 (587)
T ss_pred CCcccccccccccEEEEeeeeecCCCccceEEEEEECCcCCCCCccchhhhcCCCHHHHHHHHHHHHHHHhhhcc
Confidence 999999999999999999876545788889999999999999999999999999999999999999999999853
|
|
| >PRK09567 nirA ferredoxin-nitrite reductase; Reviewed | Back alignment and domain information |
|---|
| >PRK09566 nirA ferredoxin-nitrite reductase; Reviewed | Back alignment and domain information |
|---|
| >PLN00178 sulfite reductase | Back alignment and domain information |
|---|
| >TIGR02042 sir ferredoxin-sulfite reductase | Back alignment and domain information |
|---|
| >PRK13504 sulfite reductase subunit beta; Provisional | Back alignment and domain information |
|---|
| >TIGR02041 CysI sulfite reductase (NADPH) hemoprotein, beta-component | Back alignment and domain information |
|---|
| >COG0155 CysI Sulfite reductase, beta subunit (hemoprotein) [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >KOG0560 consensus Sulfite reductase (ferredoxin) [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR02435 CobG precorrin-3B synthase | Back alignment and domain information |
|---|
| >TIGR02066 dsrB sulfite reductase, dissimilatory-type beta subunit | Back alignment and domain information |
|---|
| >COG2221 DsrA Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits [Energy production and conversion] | Back alignment and domain information |
|---|
| >PRK14989 nitrite reductase subunit NirD; Provisional | Back alignment and domain information |
|---|
| >TIGR02374 nitri_red_nirB nitrite reductase [NAD(P)H], large subunit | Back alignment and domain information |
|---|
| >TIGR02912 sulfite_red_C sulfite reductase, subunit C | Back alignment and domain information |
|---|
| >TIGR02064 dsrA sulfite reductase, dissimilatory-type alpha subunit | Back alignment and domain information |
|---|
| >PRK09567 nirA ferredoxin-nitrite reductase; Reviewed | Back alignment and domain information |
|---|
| >PRK09566 nirA ferredoxin-nitrite reductase; Reviewed | Back alignment and domain information |
|---|
| >TIGR02066 dsrB sulfite reductase, dissimilatory-type beta subunit | Back alignment and domain information |
|---|
| >TIGR02374 nitri_red_nirB nitrite reductase [NAD(P)H], large subunit | Back alignment and domain information |
|---|
| >PRK14989 nitrite reductase subunit NirD; Provisional | Back alignment and domain information |
|---|
| >PLN02431 ferredoxin--nitrite reductase | Back alignment and domain information |
|---|
| >COG2221 DsrA Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits [Energy production and conversion] | Back alignment and domain information |
|---|
| >TIGR02042 sir ferredoxin-sulfite reductase | Back alignment and domain information |
|---|
| >PRK13504 sulfite reductase subunit beta; Provisional | Back alignment and domain information |
|---|
| >TIGR02041 CysI sulfite reductase (NADPH) hemoprotein, beta-component | Back alignment and domain information |
|---|
| >PLN00178 sulfite reductase | Back alignment and domain information |
|---|
| >TIGR02064 dsrA sulfite reductase, dissimilatory-type alpha subunit | Back alignment and domain information |
|---|
| >TIGR02435 CobG precorrin-3B synthase | Back alignment and domain information |
|---|
| >PF01077 NIR_SIR: Nitrite and sulphite reductase 4Fe-4S domain; InterPro: IPR006067 Sulphite reductases (SiRs) and related nitrite reductases (NiRs) catalyse the six-electron reduction reactions of sulphite to sulphide, and nitrite to ammonia, respectively | Back alignment and domain information |
|---|
| >TIGR02912 sulfite_red_C sulfite reductase, subunit C | Back alignment and domain information |
|---|
| >COG0155 CysI Sulfite reductase, beta subunit (hemoprotein) [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >COG1251 NirB NAD(P)H-nitrite reductase [Energy production and conversion] | Back alignment and domain information |
|---|
| >PF01077 NIR_SIR: Nitrite and sulphite reductase 4Fe-4S domain; InterPro: IPR006067 Sulphite reductases (SiRs) and related nitrite reductases (NiRs) catalyse the six-electron reduction reactions of sulphite to sulphide, and nitrite to ammonia, respectively | Back alignment and domain information |
|---|
| >COG1251 NirB NAD(P)H-nitrite reductase [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG0560 consensus Sulfite reductase (ferredoxin) [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PF03460 NIR_SIR_ferr: Nitrite/Sulfite reductase ferredoxin-like half domain; InterPro: IPR005117 Sulphite reductases (SiRs) and related nitrite reductases (NiRs) catalyse the six-electron reduction reactions of sulphite to sulphide, and nitrite to ammonia, respectively | Back alignment and domain information |
|---|
| >PF03460 NIR_SIR_ferr: Nitrite/Sulfite reductase ferredoxin-like half domain; InterPro: IPR005117 Sulphite reductases (SiRs) and related nitrite reductases (NiRs) catalyse the six-electron reduction reactions of sulphite to sulphide, and nitrite to ammonia, respectively | Back alignment and domain information |
|---|
| >PRK00366 ispG 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Reviewed | Back alignment and domain information |
|---|
| >PRK00366 ispG 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Reviewed | Back alignment and domain information |
|---|
| >PF04551 GcpE: GcpE protein; InterPro: IPR004588 This protein previously of unknown biochemical function is essential in Escherichia coli | Back alignment and domain information |
|---|
| >PF04551 GcpE: GcpE protein; InterPro: IPR004588 This protein previously of unknown biochemical function is essential in Escherichia coli | Back alignment and domain information |
|---|
| >TIGR00612 ispG_gcpE 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase | Back alignment and domain information |
|---|
| >COG0821 gcpE 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase [Lipid metabolism] | Back alignment and domain information |
|---|
| >TIGR00612 ispG_gcpE 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase | Back alignment and domain information |
|---|
| >COG0821 gcpE 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase [Lipid metabolism] | Back alignment and domain information |
|---|
| >PLN02925 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | Back alignment and domain information |
|---|
| >PRK00694 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Validated | Back alignment and domain information |
|---|
| >PRK02048 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Provisional | Back alignment and domain information |
|---|
| >cd01916 ACS_1 Acetyl-CoA synthase (ACS), also known as acetyl-CoA decarbonylase, is found in acetogenic and methanogenic organisms and is responsible for the synthesis and breakdown of acetyl-CoA | Back alignment and domain information |
|---|
| >PLN02925 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | Back alignment and domain information |
|---|
| >cd01916 ACS_1 Acetyl-CoA synthase (ACS), also known as acetyl-CoA decarbonylase, is found in acetogenic and methanogenic organisms and is responsible for the synthesis and breakdown of acetyl-CoA | Back alignment and domain information |
|---|
| >PRK00694 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Validated | Back alignment and domain information |
|---|
| >PRK00941 acetyl-CoA decarbonylase/synthase complex subunit alpha; Validated | Back alignment and domain information |
|---|
| >PRK02048 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Provisional | Back alignment and domain information |
|---|
| >PRK00941 acetyl-CoA decarbonylase/synthase complex subunit alpha; Validated | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 595 | ||||
| 3b0h_A | 588 | Assimilatory Nitrite Reductase (Nii4) From Tobbaco | 0.0 | ||
| 2akj_A | 608 | Structure Of Spinach Nitrite Reductase Length = 608 | 0.0 | ||
| 3b0g_A | 591 | Assimilatory Nitrite Reductase (Nii3) From Tobbaco | 0.0 | ||
| 3b0n_A | 584 | Q448k Mutant Of Assimilatory Nitrite Reductase (Nii | 0.0 | ||
| 3vlx_A | 584 | Assimilatory Nitrite Reductase (Nii3) - N226k Mutan | 0.0 | ||
| 3b0j_A | 584 | M175e Mutant Of Assimilatory Nitrite Reductase (Nii | 0.0 | ||
| 3b0m_A | 584 | M175k Mutant Of Assimilatory Nitrite Reductase (Nii | 0.0 | ||
| 3b0l_A | 584 | M175g Mutant Of Assimilatory Nitrite Reductase (Nii | 0.0 | ||
| 1zj8_A | 566 | Structure Of Mycobacterium Tuberculosis Nira Protei | 1e-53 | ||
| 4g38_A | 570 | Mutational Analysis Of Sulfite Reductase Hemoprotei | 1e-23 | ||
| 4htr_A | 507 | N149w Variant Of Sirhp Bound To Sulfite Length = 50 | 2e-23 | ||
| 1aop_A | 497 | Sulfite Reductase Structure At 1.6 Angstrom Resolut | 3e-23 | ||
| 4g39_A | 570 | Mutational Analysis Of Sulfite Reductase Hemoprotei | 8e-23 |
| >pdb|3B0H|A Chain A, Assimilatory Nitrite Reductase (Nii4) From Tobbaco Root Length = 588 | Back alignment and structure |
|
| >pdb|2AKJ|A Chain A, Structure Of Spinach Nitrite Reductase Length = 608 | Back alignment and structure |
| >pdb|3B0G|A Chain A, Assimilatory Nitrite Reductase (Nii3) From Tobbaco Leaf Length = 591 | Back alignment and structure |
| >pdb|3B0N|A Chain A, Q448k Mutant Of Assimilatory Nitrite Reductase (Nii3) From Tobbaco Leaf Length = 584 | Back alignment and structure |
| >pdb|3VLX|A Chain A, Assimilatory Nitrite Reductase (Nii3) - N226k Mutant - Ligand Free Form From Tobacco Leaf Length = 584 | Back alignment and structure |
| >pdb|3B0J|A Chain A, M175e Mutant Of Assimilatory Nitrite Reductase (Nii3) From Tobbaco Leaf Length = 584 | Back alignment and structure |
| >pdb|3B0M|A Chain A, M175k Mutant Of Assimilatory Nitrite Reductase (Nii3) From Tobbaco Leaf Length = 584 | Back alignment and structure |
| >pdb|3B0L|A Chain A, M175g Mutant Of Assimilatory Nitrite Reductase (Nii3) From Tobbaco Leaf Length = 584 | Back alignment and structure |
| >pdb|1ZJ8|A Chain A, Structure Of Mycobacterium Tuberculosis Nira Protein Length = 566 | Back alignment and structure |
| >pdb|4G38|A Chain A, Mutational Analysis Of Sulfite Reductase Hemoprotein Reveals The Mechanism For Coordinated Electron And Proton Transfer Length = 570 | Back alignment and structure |
| >pdb|4HTR|A Chain A, N149w Variant Of Sirhp Bound To Sulfite Length = 507 | Back alignment and structure |
| >pdb|1AOP|A Chain A, Sulfite Reductase Structure At 1.6 Angstrom Resolution Length = 497 | Back alignment and structure |
| >pdb|4G39|A Chain A, Mutational Analysis Of Sulfite Reductase Hemoprotein Reveals The Mechanism For Coordinated Electron And Proton Transfer Length = 570 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3b0g_A NII3, nitrite reductase; siroheme, Fe4S4 binding protein, oxidoreductase; HET: SRM; 1.25A {Nicotiana tabacum} PDB: 3vkp_A* 3vkq_A* 3vkr_A* 3vks_A* 3vkt_A* 3b0n_A* 3b0m_A* 3b0j_A* 3b0l_A* 3b0h_A* Length = 591 | Back alignment and structure |
|---|
Score = 745 bits (1926), Expect = 0.0
Identities = 473/573 (82%), Positives = 520/573 (90%)
Query: 23 ATSASPKTWRVHATTPAVAPVTTTSAPEVDAERLEPRVEERDGYFVLKEKFRKGINPQEK 82
K TP T APEV AERLEPRVEE+DGY++LKE+FRKGINPQEK
Sbjct: 19 GRHMFSKNAVKLHATPPSVAAPPTGAPEVAAERLEPRVEEKDGYWILKEQFRKGINPQEK 78
Query: 83 VKIEKEPMKLFMENGIEDLAKLSMEEIDQAKNTKDDIDVRLKWLGLFHRRKHHYGRFMMR 142
VKIEKEPMKLFMENGIE+LAK+ +EEIDQ+K TKDDIDVRLKWLGLFHRRK+ YGRFMMR
Sbjct: 79 VKIEKEPMKLFMENGIEELAKIPIEEIDQSKLTKDDIDVRLKWLGLFHRRKNQYGRFMMR 138
Query: 143 LKLPNGVTTSEQTRYLASVIKKYGKDGCADVTTRQNWQIRGVVLPDVPEILKGLAQVGLT 202
LKLPNGVTTS QTRYLASVI+KYGK+GCAD+TTRQNWQIRGVVLPDVPEILKGLA+VGLT
Sbjct: 139 LKLPNGVTTSAQTRYLASVIRKYGKEGCADITTRQNWQIRGVVLPDVPEILKGLAEVGLT 198
Query: 203 SLQSGMDNVRNPVGNPLAGIDPEEIVDTRPYTNLLSHFITANAQGNPTVTNLPRKWNVCV 262
SLQSGMDNVRNPVGNPLAGIDPEEIVDTRPYTNLLS FIT N++GNP V+NLPRKWN CV
Sbjct: 199 SLQSGMDNVRNPVGNPLAGIDPEEIVDTRPYTNLLSQFITGNSRGNPAVSNLPRKWNPCV 258
Query: 263 VGSHDLYEHPHINDLAYMPATKDGRFGFNLLVGGFFSPKRCAEAIPLDAWVAADDVIPVC 322
VGSHDLYEHPHINDLAYMPATKDGRFGFNLLVGGFFS KRC EAIPLDAWV ADDV+PVC
Sbjct: 259 VGSHDLYEHPHINDLAYMPATKDGRFGFNLLVGGFFSAKRCDEAIPLDAWVPADDVVPVC 318
Query: 323 KAVLEAYRDLGFRGNRQKTRMMWLIDELGIEGFRAEVVKRMPGQELDRGSSEDLVQRQWD 382
+A+LEA+RDLGFRGNRQK RMMWLIDELG+EGFRAEV KRMP Q+L+R S EDLVQ+QW+
Sbjct: 319 RAILEAFRDLGFRGNRQKCRMMWLIDELGVEGFRAEVEKRMPQQQLERASPEDLVQKQWE 378
Query: 383 RRDYLGVYPQKQEGFSYVGLHIPVGRVQADDMDELARLADAYGSGELRLTVEQNIIIPNV 442
RRDYLGV+PQKQEG+S++GLHIPVGRVQADDMDELARLAD YGSGE+RLTVEQNIIIPN+
Sbjct: 379 RRDYLGVHPQKQEGYSFIGLHIPVGRVQADDMDELARLADEYGSGEIRLTVEQNIIIPNI 438
Query: 443 DNSKLEALLKEPLLEKFSPQPSILMKGLVACTGNQFCGQAIIETKARALKVTKEVERLVD 502
+ SK+EALLKEP+L FSP P ILMKGLVACTGNQFCGQAIIETKAR+LK+T+EV+R V
Sbjct: 439 ETSKIEALLKEPVLSTFSPDPPILMKGLVACTGNQFCGQAIIETKARSLKITEEVQRQVS 498
Query: 503 VTKPVRMHWTGCPNSCAQVQVADIGFMGCMTRDEDGKTCEGADVFLGGRIGSDSHLGDIY 562
+TKPVRMHWTGCPN+CAQVQVADIGFMGC+TRD++GKT EGADVFLGGRIGSDSHLG++Y
Sbjct: 499 LTKPVRMHWTGCPNTCAQVQVADIGFMGCLTRDKNGKTVEGADVFLGGRIGSDSHLGEVY 558
Query: 563 KKGVPCKDLVPLVADILVEHFGAVLREREEAED 595
KK VPC DLVPLV D+LV +FGAV REREE ED
Sbjct: 559 KKAVPCDDLVPLVVDLLVNNFGAVPREREETED 591
|
| >2akj_A Ferredoxin--nitrite reductase, chloroplast; X-RAY crystallography, heme, electron transport, oxidoreductase; HET: SRM; 2.80A {Spinacia oleracea} SCOP: d.58.36.1 d.58.36.1 d.134.1.1 d.134.1.1 Length = 608 | Back alignment and structure |
|---|
| >1zj8_A Probable ferredoxin-dependent nitrite reductase N; NIRA, sulfite, siroheme, Fe4-S4, Cys-Tyr bond, structural proteomics in europe; HET: SRM; 2.80A {Mycobacterium tuberculosis} SCOP: d.58.36.1 d.58.36.1 d.134.1.1 d.134.1.1 PDB: 1zj9_A* Length = 566 | Back alignment and structure |
|---|
| >1aop_A Sirhp, sulfite reductase hemoprotein; oxidoreductase, siroheme, [4Fe-4S], snirr, six-electron REDU phosphate complex; HET: SRM; 1.60A {Escherichia coli} SCOP: d.58.36.1 d.58.36.1 d.134.1.1 d.134.1.1 PDB: 2aop_A* 2gep_A* 3aop_A* 3geo_A* 4aop_A* 4gep_A* 5aop_A* 5gep_A* 6gep_A* 7gep_A* 8gep_A* Length = 497 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >3or1_B Sulfite reductase beta; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_B* 2v4j_B* 2xsj_B* Length = 386 | Back alignment and structure |
|---|
| >3mm5_B Sulfite reductase, dissimilatory-type subunit BET; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3c7b_B* 3mm6_B* 3mm7_B* 3mm8_B* 3mm9_B* 3mma_B* 3mmb_B* 3mmc_B* Length = 366 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 595 | |||
| 3b0g_A | 591 | NII3, nitrite reductase; siroheme, Fe4S4 binding p | 100.0 | |
| 2akj_A | 608 | Ferredoxin--nitrite reductase, chloroplast; X-RAY | 100.0 | |
| 1zj8_A | 566 | Probable ferredoxin-dependent nitrite reductase N; | 100.0 | |
| 4g38_A | 570 | SIR-HP, sirhp, sulfite reductase [NADPH] hemoprote | 100.0 | |
| 1aop_A | 497 | Sirhp, sulfite reductase hemoprotein; oxidoreducta | 100.0 | |
| 3or1_B | 386 | Sulfite reductase beta; dissimilatory sulfite redu | 100.0 | |
| 3mm5_B | 366 | Sulfite reductase, dissimilatory-type subunit BET; | 100.0 | |
| 3mm5_A | 418 | Sulfite reductase, dissimilatory-type subunit ALP; | 100.0 | |
| 3or1_A | 437 | Sulfite reductase alpha; dissimilatory sulfite red | 100.0 | |
| 3or1_B | 386 | Sulfite reductase beta; dissimilatory sulfite redu | 100.0 | |
| 3mm5_A | 418 | Sulfite reductase, dissimilatory-type subunit ALP; | 99.98 | |
| 3or1_A | 437 | Sulfite reductase alpha; dissimilatory sulfite red | 99.98 | |
| 1zj8_A | 566 | Probable ferredoxin-dependent nitrite reductase N; | 99.98 | |
| 2akj_A | 608 | Ferredoxin--nitrite reductase, chloroplast; X-RAY | 99.97 | |
| 3mm5_B | 366 | Sulfite reductase, dissimilatory-type subunit BET; | 99.97 | |
| 3b0g_A | 591 | NII3, nitrite reductase; siroheme, Fe4S4 binding p | 99.97 | |
| 1aop_A | 497 | Sirhp, sulfite reductase hemoprotein; oxidoreducta | 99.97 | |
| 4g38_A | 570 | SIR-HP, sirhp, sulfite reductase [NADPH] hemoprote | 99.96 | |
| 3noy_A | 366 | 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; | 97.51 | |
| 3noy_A | 366 | 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; | 97.36 | |
| 4g9p_A | 406 | 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; | 96.8 | |
| 4g9p_A | 406 | 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; | 95.5 |
| >3b0g_A NII3, nitrite reductase; siroheme, Fe4S4 binding protein, oxidoreductase; HET: SRM; 1.25A {Nicotiana tabacum} PDB: 3vkp_A* 3vkq_A* 3vkr_A* 3vks_A* 3vkt_A* 3b0n_A* 3b0m_A* 3b0j_A* 3b0l_A* 3b0h_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-118 Score=1000.42 Aligned_cols=561 Identities=84% Similarity=1.374 Sum_probs=499.1
Q ss_pred ceeeccCCCcCCCCcCCCccccccccCccccccCceeeecccccCCCChhhhhhcccCCcccccccc--hHHHHhhhhhh
Q 047572 31 WRVHATTPAVAPVTTTSAPEVDAERLEPRVEERDGYFVLKEKFRKGINPQEKVKIEKEPMKLFMENG--IEDLAKLSMEE 108 (595)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~E~~K~~~~~l~~~~~~~--i~~~a~~~~~~ 108 (595)
.|++++|++++|+ .|++++|+|.+++||+.+++|||+++++.++|+|++|++|.+++||+++ .+ |++|++.++++
T Consensus 28 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~E~~K~~~~~l~~~--~~~~i~~~a~~~~~~ 104 (591)
T 3b0g_A 28 VKLHATPPSVAAP-PTGAPEVAAERLEPRVEEKDGYWILKEQFRKGINPQEKVKIEKEPMKLF--MENGIEELAKIPIEE 104 (591)
T ss_dssp --------------------CCGGGGSCCEEEETTEEEECGGGCTTCCHHHHHHHHSCTTHHH--HTCHHHHHTTSCHHH
T ss_pred HhhhcCCCccCCC-cccchhhhhhcccccccccCCccccCcccccCCChhhhhhhhcCCcccc--hhhhHHHHhhccccc
Confidence 4668888777775 3467899999999999999999999878889999999999999999999 55 89999999888
Q ss_pred cccccCCchhHHHHHhhcccceecccCCCeEEEEEecCCCccCHHHHHHHHHHHHHhC-CCCeEEecCCCceEEecCCCC
Q 047572 109 IDQAKNTKDDIDVRLKWLGLFHRRKHHYGRFMMRLKLPNGVTTSEQTRYLASVIKKYG-KDGCADVTTRQNWQIRGVVLP 187 (595)
Q Consensus 109 ~~~~~~~~~d~~~rlk~~G~y~~~~~~~~~fmvRvripgG~lt~~Qlr~la~iA~~yG-~~G~l~iTtRq~iql~gI~~~ 187 (595)
+++.+|+++|++.|+||+|+|+|++++++.||||||+|+|.+|++||+.||+||++|| + |++++|||||||||||.++
T Consensus 105 ~~~~~~~~~d~~~r~k~~G~y~~~~~~~~~~mvRvr~PgG~lt~~qlr~ladia~~yg~~-G~i~~TtRq~iql~gi~~~ 183 (591)
T 3b0g_A 105 IDQSKLTKDDIDVRLKWLGLFHRRKNQYGRFMMRLKLPNGVTTSAQTRYLASVIRKYGKE-GCADITTRQNWQIRGVVLP 183 (591)
T ss_dssp HTTSHHHHHHHHTGGGGGTEEECTTTSTTEEEEECBCGGGEEEHHHHHHHHHHHHHTGGG-CEEEECTTSCEEEEEEEGG
T ss_pred cccccCCHHHHHHHhhhceeEEeccCCCCeEEEEecCCCceECHHHHHHHHHHHHHhCCC-CeEEEeCCccEEEecCCHH
Confidence 8777778999987999999999877777899999999999999999999999999999 5 9999999999999999999
Q ss_pred CHHHHHHHHHHcCCcccCCCCCCcCceecCCCCCCCCCCccChHHHHHHHHHHHHhccCCCCCccCCCCceEEEEecCCC
Q 047572 188 DVPEILKGLAQVGLTSLQSGMDNVRNPVGNPLAGIDPEEIVDTRPYTNLLSHFITANAQGNPTVTNLPRKWNVCVVGSHD 267 (595)
Q Consensus 188 ~l~~i~~~L~~~GL~t~~a~gd~~RnI~~cP~ag~~~~~~~dt~~la~~l~~~~~~~~~~~~~~~~LPrKfkI~isgc~~ 267 (595)
++++++++|.++||++.++|||++|||++||++++|+++++|+++++++|.++|.+++.+++.+.+||+||||+||||++
T Consensus 184 ~l~~i~~~L~~~gl~~~~~~gd~~Rnv~~~p~~g~c~~~~~D~~~~a~~l~~~l~~~~~~~~~~~~LPrKfKiavsgc~~ 263 (591)
T 3b0g_A 184 DVPEILKGLAEVGLTSLQSGMDNVRNPVGNPLAGIDPEEIVDTRPYTNLLSQFITGNSRGNPAVSNLPRKWNPCVVGSHD 263 (591)
T ss_dssp GHHHHHHHHHHTTCBCTTCSSSSBCCCBCCTTTTTCTTCSSCCHHHHHHHHHHHHTTTTCCGGGSCCSSCBCEEECCCTT
T ss_pred HHHHHHHHHHHcCCCCCcCccCCCCCeEeCCCcccCcchhhhHHHHHHHHHHHHhhcccCCccccccCcceEEEEccCcc
Confidence 99999999999999999999999999999999999999999999999999999987666788899999999999999999
Q ss_pred CCCcCccCceEEEeEeecCceeEEEEEcCcCCCccccccccccccCChhcHHHHHHHHHHHHHHhccCCCccchhhHHHH
Q 047572 268 LYEHPHINDLAYMPATKDGRFGFNLLVGGFFSPKRCAEAIPLDAWVAADDVIPVCKAVLEAYRDLGFRGNRQKTRMMWLI 347 (595)
Q Consensus 268 ~c~~~~~~DIg~v~~~~~g~~gf~v~vGG~~g~~~~~~~~~l~~~v~~eev~~~~~ail~~~rd~g~r~~R~kaRl~~li 347 (595)
+|+.+.+|||||+++.++|..||+|+|||++|..++..+.++..||++|++++++++|+++|+++|+|.+|+++||+|+|
T Consensus 264 ~c~~~~~~Dig~i~~~~~g~~Gf~v~vGG~~g~~~~~~~~~l~~~v~~e~v~~~~~ai~~~~~~~G~r~~R~kaR~~~li 343 (591)
T 3b0g_A 264 LYEHPHINDLAYMPATKDGRFGFNLLVGGFFSAKRCDEAIPLDAWVPADDVVPVCRAILEAFRDLGFRGNRQKCRMMWLI 343 (591)
T ss_dssp CTTCGGGSSEEEEEEEETTEEEEEEEECCEECSSCEECCEEEEEEEEGGGHHHHHHHHHHHHHHHCCCSSGGGCSHHHHH
T ss_pred cccccccceEEEEEEEcCCCceEEEEEccccCCCCcccceeeccccCHHHHHHHHHHHHHHHHHhcccccccchhHHHHH
Confidence 99999999999999998888899999999999765567888889999999999999999999999999999999999999
Q ss_pred HhhChHHHHHHHHhhCCCCCCCCCCCchhhhcccCCCCccceeecccCCeEEEEEEcCCcccCHHHHHHHHHHHHHhCCC
Q 047572 348 DELGIEGFRAEVVKRMPGQELDRGSSEDLVQRQWDRRDYLGVYPQKQEGFSYVGLHIPVGRVQADDMDELARLADAYGSG 427 (595)
Q Consensus 348 ~~~G~e~f~~~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~Gv~~qk~~G~~~v~i~vp~Grl~a~ql~~La~iA~~yg~g 427 (595)
++||+++|+++|++++...+|.+..+..++...|.+.+|+||++|+++|+|+|++++|+|+++++||+.||+||++||.|
T Consensus 344 ~~~G~e~f~~~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~G~~~qk~~g~~~v~v~~p~Grlt~~~Lr~LadiAe~yg~g 423 (591)
T 3b0g_A 344 DELGVEGFRAEVEKRMPQQQLERASPEDLVQKQWERRDYLGVHPQKQEGYSFIGLHIPVGRVQADDMDELARLADEYGSG 423 (591)
T ss_dssp HHHCHHHHHHHHHHTSGGGCCBCCCSCCSCCSSCCCCCCSEEEECSSTTEEEEEECCGGGEECHHHHHHHHHHHHHHSSS
T ss_pred HhccHHHHHHHHHHHhccCcCCCCccccccccccccccccceeecCcCCeEEEEEeCCCcCCCHHHHHHHHHHHHHhCCC
Confidence 99999999999999982246655443333233588889999999999999999999999999999999999999999999
Q ss_pred eEEEcCCCceEeeccChhhHHHHHHhhhcCCCCCCCCCCccceeecCCccccchhhhHHHHHHHHHHHHHHhhhcCCCCc
Q 047572 428 ELRLTVEQNIIIPNVDNSKLEALLKEPLLEKFSPQPSILMKGLVACTGNQFCGQAIIETKARALKVTKEVERLVDVTKPV 507 (595)
Q Consensus 428 ~irlT~~Qni~l~~I~~~~v~~l~~el~~~g~~~~~~~~~r~v~AC~G~~~C~~a~~et~~~a~~l~~~l~~~~~lp~~~ 507 (595)
++|+|+||||+|++|+.++++++++++...++...+++.+++++||+|+++|+++++||++++..|.++|+..+++|.++
T Consensus 424 ~irlT~~QnI~l~~v~~e~l~~l~~el~~~~~~~~~g~~~r~i~aC~G~~~C~~a~~dt~~~a~~l~~~l~~~~~lp~k~ 503 (591)
T 3b0g_A 424 EIRLTVEQNIIIPNIETSKIEALLKEPVLSTFSPDPPILMKGLVACTGNQFCGQAIIETKARSLKITEEVQRQVSLTKPV 503 (591)
T ss_dssp EEEECTTSCEEEEEEEGGGHHHHTTCGGGGTSCSSCCHHHHTCEECCGGGTCTTCSSCCHHHHHHHHHHHHHHEECCSCC
T ss_pred eEEECCCCceEeCCCCHHHHHHHHHHHHhccCCCCCCCCccceecCCCcccCcchhhhHHHHHHHHHHHHHHhcCCCcce
Confidence 99999999999999999999999999876777767788899999999999999999999999999999999877899999
Q ss_pred eEeeecCCCCCcccccCcEEEEeEeeecCCCceeccEEEEEcCcCCCCCcccccccCCCCccCHHHHHHHHHHHHHHhHh
Q 047572 508 RMHWTGCPNSCAQVQVADIGFMGCMTRDEDGKTCEGADVFLGGRIGSDSHLGDIYKKGVPCKDLVPLVADILVEHFGAVL 587 (595)
Q Consensus 508 kI~iSGCpn~Ca~~~~aDIGlvG~~~~~~~G~~~~gy~I~lGG~~g~~~~lg~~~~~~v~~eel~~~l~~ll~~~~~~~~ 587 (595)
+|+||||||+|++|+++||||+|...++.+|+.+++|+||+||+.|.++++|+.+..+|++++|+++++.+|.++|++.+
T Consensus 504 kI~iSGCpn~C~~~~~aDIG~vG~~~~~~~G~~~~gy~v~lGG~~g~~~rlg~~l~~~v~~eev~~~i~~ll~~~y~~~~ 583 (591)
T 3b0g_A 504 RMHWTGCPNTCAQVQVADIGFMGCLTRDKNGKTVEGADVFLGGRIGSDSHLGEVYKKAVPCDDLVPLVVDLLVNNFGAVP 583 (591)
T ss_dssp CEEEESSTTCTTCGGGSSEEEEEEEEECTTSCEEEEEEEEECCBCSSSCBCCEEEEEEEEGGGHHHHHHHHHHHHSCCEE
T ss_pred EEEEeCCCCcccCcccccEEEEEEeecCCCCccccceEEEECCcCCCCCchhhHHhcCCCHHHHHHHHHHHHHHHHhhcc
Confidence 99999999999999999999999976546788889999999999999999999999999999999999999998999998
Q ss_pred hcccccCC
Q 047572 588 REREEAED 595 (595)
Q Consensus 588 ~~r~~~~~ 595 (595)
+++++.|+
T Consensus 584 ~~~~~~~~ 591 (591)
T 3b0g_A 584 REREETED 591 (591)
T ss_dssp C-------
T ss_pred cccccCCC
Confidence 88888775
|
| >2akj_A Ferredoxin--nitrite reductase, chloroplast; X-RAY crystallography, heme, electron transport, oxidoreductase; HET: SRM; 2.80A {Spinacia oleracea} SCOP: d.58.36.1 d.58.36.1 d.134.1.1 d.134.1.1 | Back alignment and structure |
|---|
| >1zj8_A Probable ferredoxin-dependent nitrite reductase N; NIRA, sulfite, siroheme, Fe4-S4, Cys-Tyr bond, structural proteomics in europe; HET: SRM; 2.80A {Mycobacterium tuberculosis} SCOP: d.58.36.1 d.58.36.1 d.134.1.1 d.134.1.1 PDB: 1zj9_A* | Back alignment and structure |
|---|
| >4g38_A SIR-HP, sirhp, sulfite reductase [NADPH] hemoprotein beta-compon; snirr, oxidoreductase, sulfite reductase flavoprotein; HET: SRM; 1.56A {Escherichia coli} PDB: 4g39_A* 1aop_A* 2aop_A* 2gep_A* 3aop_A* 3geo_A* 4aop_A* 4gep_A* 5aop_A* 5gep_A* 6gep_A* 7gep_A* 8gep_A* | Back alignment and structure |
|---|
| >1aop_A Sirhp, sulfite reductase hemoprotein; oxidoreductase, siroheme, [4Fe-4S], snirr, six-electron REDU phosphate complex; HET: SRM; 1.60A {Escherichia coli} SCOP: d.58.36.1 d.58.36.1 d.134.1.1 d.134.1.1 PDB: 2aop_A* 2gep_A* 3aop_A* 3geo_A* 4aop_A* 4gep_A* 5aop_A* 5gep_A* 6gep_A* 7gep_A* 8gep_A* | Back alignment and structure |
|---|
| >3or1_B Sulfite reductase beta; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_B* 2v4j_B* 2xsj_B* | Back alignment and structure |
|---|
| >3mm5_B Sulfite reductase, dissimilatory-type subunit BET; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3c7b_B* 3mm6_B* 3mm7_B* 3mm8_B* 3mm9_B* 3mma_B* 3mmb_B* 3mmc_B* | Back alignment and structure |
|---|
| >3mm5_A Sulfite reductase, dissimilatory-type subunit ALP; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3mm6_A* 3mm7_A* 3mm8_A* 3mm9_A* 3mma_A* 3mmb_A* 3mmc_A* 3c7b_A* | Back alignment and structure |
|---|
| >3or1_A Sulfite reductase alpha; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_A* 2v4j_A* 2xsj_A* | Back alignment and structure |
|---|
| >3or1_B Sulfite reductase beta; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_B* 2v4j_B* 2xsj_B* | Back alignment and structure |
|---|
| >3mm5_A Sulfite reductase, dissimilatory-type subunit ALP; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3mm6_A* 3mm7_A* 3mm8_A* 3mm9_A* 3mma_A* 3mmb_A* 3mmc_A* 3c7b_A* | Back alignment and structure |
|---|
| >3or1_A Sulfite reductase alpha; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_A* 2v4j_A* 2xsj_A* | Back alignment and structure |
|---|
| >1zj8_A Probable ferredoxin-dependent nitrite reductase N; NIRA, sulfite, siroheme, Fe4-S4, Cys-Tyr bond, structural proteomics in europe; HET: SRM; 2.80A {Mycobacterium tuberculosis} SCOP: d.58.36.1 d.58.36.1 d.134.1.1 d.134.1.1 PDB: 1zj9_A* | Back alignment and structure |
|---|
| >2akj_A Ferredoxin--nitrite reductase, chloroplast; X-RAY crystallography, heme, electron transport, oxidoreductase; HET: SRM; 2.80A {Spinacia oleracea} SCOP: d.58.36.1 d.58.36.1 d.134.1.1 d.134.1.1 | Back alignment and structure |
|---|
| >3mm5_B Sulfite reductase, dissimilatory-type subunit BET; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3c7b_B* 3mm6_B* 3mm7_B* 3mm8_B* 3mm9_B* 3mma_B* 3mmb_B* 3mmc_B* | Back alignment and structure |
|---|
| >3b0g_A NII3, nitrite reductase; siroheme, Fe4S4 binding protein, oxidoreductase; HET: SRM; 1.25A {Nicotiana tabacum} PDB: 3vkp_A* 3vkq_A* 3vkr_A* 3vks_A* 3vkt_A* 3b0n_A* 3b0m_A* 3b0j_A* 3b0l_A* 3b0h_A* | Back alignment and structure |
|---|
| >1aop_A Sirhp, sulfite reductase hemoprotein; oxidoreductase, siroheme, [4Fe-4S], snirr, six-electron REDU phosphate complex; HET: SRM; 1.60A {Escherichia coli} SCOP: d.58.36.1 d.58.36.1 d.134.1.1 d.134.1.1 PDB: 2aop_A* 2gep_A* 3aop_A* 3geo_A* 4aop_A* 4gep_A* 5aop_A* 5gep_A* 6gep_A* 7gep_A* 8gep_A* | Back alignment and structure |
|---|
| >4g38_A SIR-HP, sirhp, sulfite reductase [NADPH] hemoprotein beta-compon; snirr, oxidoreductase, sulfite reductase flavoprotein; HET: SRM; 1.56A {Escherichia coli} PDB: 4g39_A* 1aop_A* 2aop_A* 2gep_A* 3aop_A* 3geo_A* 4aop_A* 4gep_A* 5aop_A* 5gep_A* 6gep_A* 7gep_A* 8gep_A* | Back alignment and structure |
|---|
| >3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus} | Back alignment and structure |
|---|
| >3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus} | Back alignment and structure |
|---|
| >4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A* | Back alignment and structure |
|---|
| >4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 595 | ||||
| d2akja2 | 153 | d.58.36.1 (A:22-174) Ferredoxin--nitrite reductase | 7e-62 | |
| d2akja2 | 153 | d.58.36.1 (A:22-174) Ferredoxin--nitrite reductase | 7e-13 | |
| d2akja4 | 171 | d.134.1.1 (A:175-345) Ferredoxin--nitrite reductas | 6e-58 | |
| d2akja4 | 171 | d.134.1.1 (A:175-345) Ferredoxin--nitrite reductas | 3e-04 | |
| d1zj8a4 | 165 | d.134.1.1 (A:162-326) Sulfite reductase NirA {Myco | 2e-40 | |
| d2akja3 | 126 | d.134.1.1 (A:431-556) Ferredoxin--nitrite reductas | 3e-37 | |
| d1zj8a2 | 152 | d.58.36.1 (A:10-161) Sulfite reductase NirA {Mycob | 1e-35 | |
| d1zj8a2 | 152 | d.58.36.1 (A:10-161) Sulfite reductase NirA {Mycob | 3e-11 | |
| d2akja1 | 85 | d.58.36.1 (A:346-430) Ferredoxin--nitrite reductas | 6e-33 | |
| d2akja1 | 85 | d.58.36.1 (A:346-430) Ferredoxin--nitrite reductas | 4e-17 | |
| d1aopa3 | 197 | d.134.1.1 (A:149-345) Sulfite reductase hemoprotei | 1e-32 | |
| d1zj8a3 | 149 | d.134.1.1 (A:407-555) Sulfite reductase NirA {Myco | 2e-24 | |
| d1aopa1 | 65 | d.58.36.1 (A:81-145) Sulfite reductase, domains 1 | 2e-21 | |
| d1aopa1 | 65 | d.58.36.1 (A:81-145) Sulfite reductase, domains 1 | 2e-08 | |
| d1zj8a1 | 80 | d.58.36.1 (A:327-406) Sulfite reductase NirA {Myco | 1e-20 | |
| d1zj8a1 | 80 | d.58.36.1 (A:327-406) Sulfite reductase NirA {Myco | 2e-17 | |
| d1aopa4 | 145 | d.134.1.1 (A:426-570) Sulfite reductase hemoprotei | 2e-19 | |
| d1aopa2 | 80 | d.58.36.1 (A:346-425) Sulfite reductase, domains 1 | 2e-16 | |
| d1aopa2 | 80 | d.58.36.1 (A:346-425) Sulfite reductase, domains 1 | 3e-09 | |
| d2v4jb2 | 134 | d.58.36.2 (B:2-135) Dissimilatory sulfite reductas | 3e-08 | |
| d2v4jb2 | 134 | d.58.36.2 (B:2-135) Dissimilatory sulfite reductas | 8e-07 | |
| d2v4jb3 | 177 | d.134.1.1 (B:136-208,B:278-381) Dissimilatory sulf | 5e-07 | |
| d3c7bb3 | 179 | d.134.1.1 (B:123-196,B:262-366) Dissimilatory sulf | 5e-06 | |
| d3c7ba3 | 185 | d.134.1.1 (A:167-238,A:305-417) Dissimilatory sulf | 6e-05 | |
| d3c7bb2 | 119 | d.58.36.2 (B:4-122) Dissimilatory sulfite reductas | 2e-04 |
| >d2akja2 d.58.36.1 (A:22-174) Ferredoxin--nitrite reductase, NIR {Spinach (Spinacia oleracea) [TaxId: 3562]} Length = 153 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: Nitrite/Sulfite reductase N-terminal domain-like family: Duplicated SiR/NiR-like domains 1 and 3 domain: Ferredoxin--nitrite reductase, NIR species: Spinach (Spinacia oleracea) [TaxId: 3562]
Score = 199 bits (507), Expect = 7e-62
Identities = 135/153 (88%), Positives = 146/153 (95%)
Query: 55 RLEPRVEERDGYFVLKEKFRKGINPQEKVKIEKEPMKLFMENGIEDLAKLSMEEIDQAKN 114
RLEPRVEERDG++VLKE+FR GINP EKVKIEK+PMKLF+E+GI DLA LSMEE+D++K+
Sbjct: 1 RLEPRVEERDGFWVLKEEFRSGINPAEKVKIEKDPMKLFIEDGISDLATLSMEEVDKSKH 60
Query: 115 TKDDIDVRLKWLGLFHRRKHHYGRFMMRLKLPNGVTTSEQTRYLASVIKKYGKDGCADVT 174
KDDIDVRLKWLGLFHRRKHHYGRFMMRLKLPNGVTTSEQTRYLASVIKKYGKDGCADVT
Sbjct: 61 NKDDIDVRLKWLGLFHRRKHHYGRFMMRLKLPNGVTTSEQTRYLASVIKKYGKDGCADVT 120
Query: 175 TRQNWQIRGVVLPDVPEILKGLAQVGLTSLQSG 207
TRQNWQIRGVVLPDVPEI+KGL VGLTSLQSG
Sbjct: 121 TRQNWQIRGVVLPDVPEIIKGLESVGLTSLQSG 153
|
| >d2akja2 d.58.36.1 (A:22-174) Ferredoxin--nitrite reductase, NIR {Spinach (Spinacia oleracea) [TaxId: 3562]} Length = 153 | Back information, alignment and structure |
|---|
| >d2akja4 d.134.1.1 (A:175-345) Ferredoxin--nitrite reductase, NIR {Spinach (Spinacia oleracea) [TaxId: 3562]} Length = 171 | Back information, alignment and structure |
|---|
| >d2akja4 d.134.1.1 (A:175-345) Ferredoxin--nitrite reductase, NIR {Spinach (Spinacia oleracea) [TaxId: 3562]} Length = 171 | Back information, alignment and structure |
|---|
| >d1zj8a4 d.134.1.1 (A:162-326) Sulfite reductase NirA {Mycobacterium tuberculosis [TaxId: 1773]} Length = 165 | Back information, alignment and structure |
|---|
| >d2akja3 d.134.1.1 (A:431-556) Ferredoxin--nitrite reductase, NIR {Spinach (Spinacia oleracea) [TaxId: 3562]} Length = 126 | Back information, alignment and structure |
|---|
| >d1zj8a2 d.58.36.1 (A:10-161) Sulfite reductase NirA {Mycobacterium tuberculosis [TaxId: 1773]} Length = 152 | Back information, alignment and structure |
|---|
| >d1zj8a2 d.58.36.1 (A:10-161) Sulfite reductase NirA {Mycobacterium tuberculosis [TaxId: 1773]} Length = 152 | Back information, alignment and structure |
|---|
| >d2akja1 d.58.36.1 (A:346-430) Ferredoxin--nitrite reductase, NIR {Spinach (Spinacia oleracea) [TaxId: 3562]} Length = 85 | Back information, alignment and structure |
|---|
| >d2akja1 d.58.36.1 (A:346-430) Ferredoxin--nitrite reductase, NIR {Spinach (Spinacia oleracea) [TaxId: 3562]} Length = 85 | Back information, alignment and structure |
|---|
| >d1aopa3 d.134.1.1 (A:149-345) Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 {Escherichia coli [TaxId: 562]} Length = 197 | Back information, alignment and structure |
|---|
| >d1zj8a3 d.134.1.1 (A:407-555) Sulfite reductase NirA {Mycobacterium tuberculosis [TaxId: 1773]} Length = 149 | Back information, alignment and structure |
|---|
| >d1aopa1 d.58.36.1 (A:81-145) Sulfite reductase, domains 1 and 3 {Escherichia coli [TaxId: 562]} Length = 65 | Back information, alignment and structure |
|---|
| >d1aopa1 d.58.36.1 (A:81-145) Sulfite reductase, domains 1 and 3 {Escherichia coli [TaxId: 562]} Length = 65 | Back information, alignment and structure |
|---|
| >d1zj8a1 d.58.36.1 (A:327-406) Sulfite reductase NirA {Mycobacterium tuberculosis [TaxId: 1773]} Length = 80 | Back information, alignment and structure |
|---|
| >d1zj8a1 d.58.36.1 (A:327-406) Sulfite reductase NirA {Mycobacterium tuberculosis [TaxId: 1773]} Length = 80 | Back information, alignment and structure |
|---|
| >d1aopa4 d.134.1.1 (A:426-570) Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 {Escherichia coli [TaxId: 562]} Length = 145 | Back information, alignment and structure |
|---|
| >d1aopa2 d.58.36.1 (A:346-425) Sulfite reductase, domains 1 and 3 {Escherichia coli [TaxId: 562]} Length = 80 | Back information, alignment and structure |
|---|
| >d1aopa2 d.58.36.1 (A:346-425) Sulfite reductase, domains 1 and 3 {Escherichia coli [TaxId: 562]} Length = 80 | Back information, alignment and structure |
|---|
| >d2v4jb2 d.58.36.2 (B:2-135) Dissimilatory sulfite reductase subunit beta, DsrB {Desulfovibrio vulgaris [TaxId: 881]} Length = 134 | Back information, alignment and structure |
|---|
| >d2v4jb2 d.58.36.2 (B:2-135) Dissimilatory sulfite reductase subunit beta, DsrB {Desulfovibrio vulgaris [TaxId: 881]} Length = 134 | Back information, alignment and structure |
|---|
| >d2v4jb3 d.134.1.1 (B:136-208,B:278-381) Dissimilatory sulfite reductase subunit beta, DsrB {Desulfovibrio vulgaris [TaxId: 881]} Length = 177 | Back information, alignment and structure |
|---|
| >d3c7bb3 d.134.1.1 (B:123-196,B:262-366) Dissimilatory sulfite reductase subunit beta, DsrB {Archaeoglobus fulgidus [TaxId: 2234]} Length = 179 | Back information, alignment and structure |
|---|
| >d3c7ba3 d.134.1.1 (A:167-238,A:305-417) Dissimilatory sulfite reductase subunit alpha, DsrA {Archaeoglobus fulgidus [TaxId: 2234]} Length = 185 | Back information, alignment and structure |
|---|
| >d3c7bb2 d.58.36.2 (B:4-122) Dissimilatory sulfite reductase subunit beta, DsrB {Archaeoglobus fulgidus [TaxId: 2234]} Length = 119 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 595 | |||
| d2akja4 | 171 | Ferredoxin--nitrite reductase, NIR {Spinach (Spina | 100.0 | |
| d2akja2 | 153 | Ferredoxin--nitrite reductase, NIR {Spinach (Spina | 100.0 | |
| d1zj8a4 | 165 | Sulfite reductase NirA {Mycobacterium tuberculosis | 100.0 | |
| d1aopa3 | 197 | Sulfite reductase hemoprotein (SiRHP), domains 2 a | 100.0 | |
| d1zj8a2 | 152 | Sulfite reductase NirA {Mycobacterium tuberculosis | 100.0 | |
| d2akja3 | 126 | Ferredoxin--nitrite reductase, NIR {Spinach (Spina | 99.96 | |
| d1zj8a3 | 149 | Sulfite reductase NirA {Mycobacterium tuberculosis | 99.93 | |
| d1zj8a3 | 149 | Sulfite reductase NirA {Mycobacterium tuberculosis | 99.93 | |
| d1aopa4 | 145 | Sulfite reductase hemoprotein (SiRHP), domains 2 a | 99.9 | |
| d2v4jb3 | 177 | Dissimilatory sulfite reductase subunit beta, DsrB | 99.89 | |
| d2v4ja3 | 189 | Dissimilatory sulfite reductase subunit alpha, Dsr | 99.87 | |
| d1aopa1 | 65 | Sulfite reductase, domains 1 and 3 {Escherichia co | 99.85 | |
| d2akja3 | 126 | Ferredoxin--nitrite reductase, NIR {Spinach (Spina | 99.85 | |
| d1aopa4 | 145 | Sulfite reductase hemoprotein (SiRHP), domains 2 a | 99.85 | |
| d3c7bb3 | 179 | Dissimilatory sulfite reductase subunit beta, DsrB | 99.84 | |
| d3c7ba3 | 185 | Dissimilatory sulfite reductase subunit alpha, Dsr | 99.84 | |
| d2akja4 | 171 | Ferredoxin--nitrite reductase, NIR {Spinach (Spina | 99.82 | |
| d2akja1 | 85 | Ferredoxin--nitrite reductase, NIR {Spinach (Spina | 99.81 | |
| d1zj8a4 | 165 | Sulfite reductase NirA {Mycobacterium tuberculosis | 99.81 | |
| d2v4jb3 | 177 | Dissimilatory sulfite reductase subunit beta, DsrB | 99.81 | |
| d2akja1 | 85 | Ferredoxin--nitrite reductase, NIR {Spinach (Spina | 99.79 | |
| d1zj8a1 | 80 | Sulfite reductase NirA {Mycobacterium tuberculosis | 99.79 | |
| d1zj8a1 | 80 | Sulfite reductase NirA {Mycobacterium tuberculosis | 99.78 | |
| d3c7bb3 | 179 | Dissimilatory sulfite reductase subunit beta, DsrB | 99.78 | |
| d3c7ba3 | 185 | Dissimilatory sulfite reductase subunit alpha, Dsr | 99.73 | |
| d2v4ja3 | 189 | Dissimilatory sulfite reductase subunit alpha, Dsr | 99.73 | |
| d1aopa3 | 197 | Sulfite reductase hemoprotein (SiRHP), domains 2 a | 99.68 | |
| d1aopa2 | 80 | Sulfite reductase, domains 1 and 3 {Escherichia co | 99.67 | |
| d1zj8a2 | 152 | Sulfite reductase NirA {Mycobacterium tuberculosis | 99.61 | |
| d2akja2 | 153 | Ferredoxin--nitrite reductase, NIR {Spinach (Spina | 99.59 | |
| d1aopa1 | 65 | Sulfite reductase, domains 1 and 3 {Escherichia co | 99.57 | |
| d2v4jb2 | 134 | Dissimilatory sulfite reductase subunit beta, DsrB | 99.5 | |
| d1aopa2 | 80 | Sulfite reductase, domains 1 and 3 {Escherichia co | 99.46 | |
| d3c7bb2 | 119 | Dissimilatory sulfite reductase subunit beta, DsrB | 99.44 | |
| d2v4jb2 | 134 | Dissimilatory sulfite reductase subunit beta, DsrB | 99.25 | |
| d3c7bb2 | 119 | Dissimilatory sulfite reductase subunit beta, DsrB | 99.06 | |
| d3c7ba2 | 166 | Dissimilatory sulfite reductase subunit alpha, Dsr | 97.02 | |
| d2v4ja2 | 166 | Dissimilatory sulfite reductase subunit alpha, Dsr | 96.85 | |
| d3c7ba2 | 166 | Dissimilatory sulfite reductase subunit alpha, Dsr | 96.64 | |
| d2v4ja2 | 166 | Dissimilatory sulfite reductase subunit alpha, Dsr | 96.55 |
| >d2akja4 d.134.1.1 (A:175-345) Ferredoxin--nitrite reductase, NIR {Spinach (Spinacia oleracea) [TaxId: 3562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Nitrite and sulphite reductase 4Fe-4S domain-like superfamily: Nitrite and sulphite reductase 4Fe-4S domain-like family: Nitrite and sulphite reductase 4Fe-4S domain-like domain: Ferredoxin--nitrite reductase, NIR species: Spinach (Spinacia oleracea) [TaxId: 3562]
Probab=100.00 E-value=1.5e-40 Score=314.77 Aligned_cols=165 Identities=82% Similarity=1.406 Sum_probs=151.8
Q ss_pred CCCcCceecCCCCCCCCCCccChHHHHHHHHHHHHhccCCCCCccCCCCceEEEEecCCCCCCcCccCceEEEeEeecCc
Q 047572 208 MDNVRNPVGNPLAGIDPEEIVDTRPYTNLLSHFITANAQGNPTVTNLPRKWNVCVVGSHDLYEHPHINDLAYMPATKDGR 287 (595)
Q Consensus 208 gd~~RnI~~cP~ag~~~~~~~dt~~la~~l~~~~~~~~~~~~~~~~LPrKfkI~isgc~~~c~~~~~~DIg~v~~~~~g~ 287 (595)
.|++||||+||++|+|+++++||+|++++|.++|..+..+++++.+|||||||+||||+++|+++++|||||+++.++|+
T Consensus 1 ~D~vRNv~~~P~aGv~~~e~~D~~pla~~l~~~~~~~~~~~~~~~~LPrKfKi~isGc~~~c~~~~~~DIG~~~~~~~g~ 80 (171)
T d2akja4 1 MDNVRNPVGNPLAGIDPHEIVDTRPFTNLISQFVTANSRGNLSITNLPRKWNPCVIGSHDLYEHPHINDLAYMPATKNGK 80 (171)
T ss_dssp SSSBCCCBCCTTTTTCTTCSSCCHHHHHHHHHHHTTTTTCCGGGSCCSSCBCEEECCCTTCTTCGGGSSEEEEEEESSSS
T ss_pred CCCCccccCCCcCCCCcccccCHHHHHHHHHHHHHhccccchhhhhCchhceeeecCCccceeeeeecceEEEEeccCCc
Confidence 48999999999999999999999999999999998755556678999999999999999999999999999999999888
Q ss_pred eeEEEEEcCcCCCccccccccccccCChhcHHHHHHHHHHHHHHhccCCCccchhhHHHHHhhChHHHHHHHHhhCCCCC
Q 047572 288 FGFNLLVGGFFSPKRCAEAIPLDAWVAADDVIPVCKAVLEAYRDLGFRGNRQKTRMMWLIDELGIEGFRAEVVKRMPGQE 367 (595)
Q Consensus 288 ~gf~v~vGG~~g~~~~~~~~~l~~~v~~eev~~~~~ail~~~rd~g~r~~R~kaRl~~li~~~G~e~f~~~v~~~~~~~~ 367 (595)
.||+|++||++|.+++..+..+..+++++++++++++|+++|+++|+|++|+++||+|+|++||+|+|+++|+++++...
T Consensus 81 ~gf~v~vgGg~g~~~~~~a~~~~~~v~~~~v~~~~~av~~~y~~~g~r~~r~~aR~~~li~~~G~e~f~~~v~~~l~~~~ 160 (171)
T d2akja4 81 FGFNLLVGGFFSIKRCEEAIPLDAWVSAEDVVPVCKAMLEAFRDLGFRGNRQKCRMMWLIDELGMEAFRGEVEKRMPEQV 160 (171)
T ss_dssp EEEEEEECCEECSSCEECCEEEEEEEEGGGHHHHHHHHHHHHHHHCCCSSGGGCSHHHHHHHHCHHHHHHHHHTTSTTSC
T ss_pred ceEEEEEeeccCccccccceeccccCCHHHHHHHHHHHHHHHHHhcccchhhhhHHHHHHHHcCHHHHHHHHHHHhCccc
Confidence 99999999999987666778888999999999999999999999999999999999999999999999999999997333
Q ss_pred CCCCC
Q 047572 368 LDRGS 372 (595)
Q Consensus 368 l~~~~ 372 (595)
++++.
T Consensus 161 ~e~a~ 165 (171)
T d2akja4 161 LERAS 165 (171)
T ss_dssp CCCCC
T ss_pred ccccC
Confidence 33443
|
| >d2akja2 d.58.36.1 (A:22-174) Ferredoxin--nitrite reductase, NIR {Spinach (Spinacia oleracea) [TaxId: 3562]} | Back information, alignment and structure |
|---|
| >d1zj8a4 d.134.1.1 (A:162-326) Sulfite reductase NirA {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d1aopa3 d.134.1.1 (A:149-345) Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1zj8a2 d.58.36.1 (A:10-161) Sulfite reductase NirA {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d2akja3 d.134.1.1 (A:431-556) Ferredoxin--nitrite reductase, NIR {Spinach (Spinacia oleracea) [TaxId: 3562]} | Back information, alignment and structure |
|---|
| >d1zj8a3 d.134.1.1 (A:407-555) Sulfite reductase NirA {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d1zj8a3 d.134.1.1 (A:407-555) Sulfite reductase NirA {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d1aopa4 d.134.1.1 (A:426-570) Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2v4jb3 d.134.1.1 (B:136-208,B:278-381) Dissimilatory sulfite reductase subunit beta, DsrB {Desulfovibrio vulgaris [TaxId: 881]} | Back information, alignment and structure |
|---|
| >d2v4ja3 d.134.1.1 (A:168-241,A:323-437) Dissimilatory sulfite reductase subunit alpha, DsrA {Desulfovibrio vulgaris [TaxId: 881]} | Back information, alignment and structure |
|---|
| >d1aopa1 d.58.36.1 (A:81-145) Sulfite reductase, domains 1 and 3 {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2akja3 d.134.1.1 (A:431-556) Ferredoxin--nitrite reductase, NIR {Spinach (Spinacia oleracea) [TaxId: 3562]} | Back information, alignment and structure |
|---|
| >d1aopa4 d.134.1.1 (A:426-570) Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d3c7bb3 d.134.1.1 (B:123-196,B:262-366) Dissimilatory sulfite reductase subunit beta, DsrB {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
| >d3c7ba3 d.134.1.1 (A:167-238,A:305-417) Dissimilatory sulfite reductase subunit alpha, DsrA {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
| >d2akja4 d.134.1.1 (A:175-345) Ferredoxin--nitrite reductase, NIR {Spinach (Spinacia oleracea) [TaxId: 3562]} | Back information, alignment and structure |
|---|
| >d2akja1 d.58.36.1 (A:346-430) Ferredoxin--nitrite reductase, NIR {Spinach (Spinacia oleracea) [TaxId: 3562]} | Back information, alignment and structure |
|---|
| >d1zj8a4 d.134.1.1 (A:162-326) Sulfite reductase NirA {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d2v4jb3 d.134.1.1 (B:136-208,B:278-381) Dissimilatory sulfite reductase subunit beta, DsrB {Desulfovibrio vulgaris [TaxId: 881]} | Back information, alignment and structure |
|---|
| >d2akja1 d.58.36.1 (A:346-430) Ferredoxin--nitrite reductase, NIR {Spinach (Spinacia oleracea) [TaxId: 3562]} | Back information, alignment and structure |
|---|
| >d1zj8a1 d.58.36.1 (A:327-406) Sulfite reductase NirA {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d1zj8a1 d.58.36.1 (A:327-406) Sulfite reductase NirA {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d3c7bb3 d.134.1.1 (B:123-196,B:262-366) Dissimilatory sulfite reductase subunit beta, DsrB {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
| >d3c7ba3 d.134.1.1 (A:167-238,A:305-417) Dissimilatory sulfite reductase subunit alpha, DsrA {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
| >d2v4ja3 d.134.1.1 (A:168-241,A:323-437) Dissimilatory sulfite reductase subunit alpha, DsrA {Desulfovibrio vulgaris [TaxId: 881]} | Back information, alignment and structure |
|---|
| >d1aopa3 d.134.1.1 (A:149-345) Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1aopa2 d.58.36.1 (A:346-425) Sulfite reductase, domains 1 and 3 {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1zj8a2 d.58.36.1 (A:10-161) Sulfite reductase NirA {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d2akja2 d.58.36.1 (A:22-174) Ferredoxin--nitrite reductase, NIR {Spinach (Spinacia oleracea) [TaxId: 3562]} | Back information, alignment and structure |
|---|
| >d1aopa1 d.58.36.1 (A:81-145) Sulfite reductase, domains 1 and 3 {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2v4jb2 d.58.36.2 (B:2-135) Dissimilatory sulfite reductase subunit beta, DsrB {Desulfovibrio vulgaris [TaxId: 881]} | Back information, alignment and structure |
|---|
| >d1aopa2 d.58.36.1 (A:346-425) Sulfite reductase, domains 1 and 3 {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d3c7bb2 d.58.36.2 (B:4-122) Dissimilatory sulfite reductase subunit beta, DsrB {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
| >d2v4jb2 d.58.36.2 (B:2-135) Dissimilatory sulfite reductase subunit beta, DsrB {Desulfovibrio vulgaris [TaxId: 881]} | Back information, alignment and structure |
|---|
| >d3c7bb2 d.58.36.2 (B:4-122) Dissimilatory sulfite reductase subunit beta, DsrB {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
| >d3c7ba2 d.58.36.2 (A:1-166) Dissimilatory sulfite reductase subunit alpha, DsrA {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
| >d2v4ja2 d.58.36.2 (A:2-167) Dissimilatory sulfite reductase subunit alpha, DsrA {Desulfovibrio vulgaris [TaxId: 881]} | Back information, alignment and structure |
|---|
| >d3c7ba2 d.58.36.2 (A:1-166) Dissimilatory sulfite reductase subunit alpha, DsrA {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
| >d2v4ja2 d.58.36.2 (A:2-167) Dissimilatory sulfite reductase subunit alpha, DsrA {Desulfovibrio vulgaris [TaxId: 881]} | Back information, alignment and structure |
|---|