Citrus Sinensis ID: 047604

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380--
Protein Sequence
MVFMADLREKHQQELENLTLTTQPFKTIKLFILGVIQYLKRSVLYLLAKGGWLMLSCTVVAALGILLVTIDGPHEKHLEELSEYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALFTIKAMQCGRVDLKSAPYDTIQLKRGPSWLDKDCDEFGPPLFSSSEGSRVPLSSILPQVQLEAILWGVGTALGELPPYFISRAASISGSRLDAMDEFDDSSTESDGVVPNPLFDLAGIMCGQFGVPFWKFFLATLIGKAIIKTHIQTVFIISVCNNQLLDWIENELIWVLSLVPGFAPVLPSLVAKLHTMRAKYLKPQQPSSHIKVKKWDFSFASVWNTIVWLMLMNFFVKIVTDTAQRYLKKQQDKEIAALTNNSSASRQSS
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHccHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHcccccHHHHHHHHccccccccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHEEEEEEEEcHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHcEEcccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHccccHHHHHHHHHHHHHccccccccHHHHHcccccccHcHHHHHHHHHHHHHHHHHHHHHHHEHHHHccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccc
Coil and Loop (DISEMBL)
MVFMADLREKHQQELENltlttqpfkTIKLFILGVIQYLKRSVLYLLAKGGWLMLSCTVVAALGILLVTidgphekhLEELSEYFRFGLWWVALGVAssiglgsgLHTFVLYLGPHIALFTIKAMqcgrvdlksapydtiqlkrgpswldkdcdefgpplfsssegsrvplssilpqVQLEAILWGVgtalgelppyfISRAAsisgsrldamdefddsstesdgvvpnplfdlagimcgqfgvPFWKFFLATLIGKAIIKTHIQTVFIISVCNNQLLDWIENELIWVLSlvpgfapvlPSLVAKLHTMRakylkpqqpsshikvkkwdFSFASVWNTIVWLMLMNFFVKIVTDTAQRYLKKQQDKEIAaltnnssasrqss
Flexible Loop (DISEMBL)
MVFMADLREKHQQELenltlttqpfkTIKLFILGVIQYLKRSVLYLLAKGGWLMLSCTVVAALGILLVTIDGPHEKHLEELSEYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALFTIKAMQCGRVDLKSAPYDTIQLKRGPSWLDKDCDEFGPPLFSSSEGSRVPLSSILPQVQLEAILWGVGTALGELPPYFISRAASISGSRLDAMDEFDDSSTESDGVVPNPLFDLAGIMCGQFGVPFWKFFLATLIGKAIIKTHIQTVFIISVCNNQLLDWIENELIWVLSLVPGFAPVLPSLVAKLHTMRAKYlkpqqpsshikvkkWDFSFASVWNTIVWLMLMNFFVKIVTDTAQRYLKKQQdkeiaaltnnssasrqss
Low Complexity Region (SEG)
MVFMADLREKHQQELENLTLTTQPFKTIKLFILGVIQYLKRSVLYLLAKGGWLMLSCTVVAALGILLVTIDGPHEKHLEELSEYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALFTIKAMQCGRVDLKSAPYDTIQLKRGPSWLDKDCDEFGPPLFSSSEGSRVPLSSILPQVQLEAILWGVGTALGELPPYFISRAASISGSRLDAMDEFDDSSTESDGVVPNPLFDLAGIMCGQFGVPFWKFFLATLIGKAIIKTHIQTVFIISVCNNQLLDWIENELIWVLSLVPGFAPVLPSLVAKLHTMRAKYLKPQQPSSHIKVKKWDFSFASVWNTIVWLMLMNFFVKIVTDTAQRYLKKQQDKEIAALTNNSSASRQSS
Disordered region (IsUnstruct)
****************NLTLTTQPFKTIKLFILGVIQYLKRSVLYLLAKGGWLMLSCTVVAALGILLVTIDGPHEKHLEELSEYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALFTIKAMQCGRVDLKSAPYDTIQLKRGPSWLDKDCDEFG*************LSSILPQVQLEAILWGVGTALGELPPYFISRAAS*********************VVPNPLFDLAGIMCGQFGVPFWKFFLATLIGKAIIKTHIQTVFIISVCNNQLLDWIENELIWVLSLVPGFAPVLPSLVAKLHTMRAKYLKPQ**SSHIKVKKWDFSFASVWNTIVWLMLMNFFVKIVTDTAQRYL**********************
Disordered Region (DISOPRED)
*****************LTLTTQPFKTIKLFILGVIQYLKRSVLYLLAKGGWLMLSCTVVAALGILLVTIDGPHEKHLEELSEYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALFTIKAMQCGRVDLKSAPYDTIQLKRGPSWLDKDCDEFGPPLFSSSEGSRVPLSSILPQVQLEAILWGVGTALGELPPYFISRAASISGSRLDAMDEFDDSSTESDGVVPNPLFDLAGIMCGQFGVPFWKFFLATLIGKAIIKTHIQTVFIISVCNNQLLDWIENELIWVLSLVPGFAPVLPSLVAKLH************************FASVWNTIVWLMLMNFFVKIVTDTAQR************************
Disordered Region (DISEMBL)
MVFMADLREKHQQELENLTLTTQPFKTIKLFILGVIQYLKRSVLYLLAKGGWLMLSCTVVAALGILLVTIDGPHEKHLEELSEYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALFTIKAMQCGRVDLKSAPYDTIQLKRGPSWLDKDCDEFGPPLFSSSEGSRVPLSSILPQVQLEAILWGVGTALGELPPYFISRAASISGSRLDAM***********GVVPNPLFDLAGIMCGQFGVPFWKFFLATLIGKAIIKTHIQTVFIISVCNNQLLDWIENELIWVLSLVPGFAPVLPSLVAKLHTMRAKY**********KVKKWDFSFASVWNTIVWLMLMNFFVKIVTDTAQRYLKKQQDKEIAA************
Disordered Region (DISPRO)
MVFMADLREKHQQELENLTLTTQPFKTIKLFILGVIQYLKRSVLYLLAKGGWLMLSCTVVAALGILLVTIDGPHEKHLEELSEYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALFTIKAMQCGRVDLKSAPYDTIQLKRGPSWLDKDCDEFGPPLFSSSEGSRVPLSSILPQVQLEAILWGVGTALGELPPYFISRAASISGSRLDAMDEFDDSSTESDGVVPNPLFDLAGIMCGQFGVPFWKFFLATLIGKAIIKTHIQTVFIISVCNNQLLDWIENELIWVLSLVPGFAPVLPSLVAKLHTMRAKYLKPQ********KKWDFSFASVWNTIVWLMLMNFFVKIVTDTAQRYLKKQQDKEI**************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVFMADLREKHQQELENLTLTTQPFKTIKLFILGVIQYLKRSVLYLLAKGGWLMLSCTVVAALGILLVTIDGPHEKHLEELSEYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALFTIKAMQCGRVDLKSAPYDTIQLKRGPSWLDKDCDEFGPPLFSSSEGSRVPLSSILPQVQLEAILWGVGTALGELPPYFISRAASISGSRLDAMDEFDDSSTESDGVVPNPLFDLAGIMCGQFGVPFWKFFLATLIGKAIIKTHIQTVFIISVCNNQLLDWIENELIWVLSLVPGFAPVLPSLVAKLHTMRAKYLKPQQPSSHIKVKKWDFSFASVWNTIVWLMLMNFFVKIVTDTAQRYLKKQQDKEIAALTNNSSASRQSS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	382	2.2.26 [Sep-21-2011]
Q68EQ9	406	Vacuole membrane protein	yes	no	0.897	0.844	0.332	3e-53
Q91ZQ0	406	Vacuole membrane protein	yes	no	0.882	0.830	0.322	3e-53
Q99KU0	406	Vacuole membrane protein	yes	no	0.882	0.830	0.314	1e-52
Q6INE8	406	Vacuole membrane protein	N/A	no	0.897	0.844	0.329	2e-52
Q6NYY9	406	Vacuole membrane protein	yes	no	0.876	0.825	0.34	3e-52
Q5R9K4	406	Vacuole membrane protein	yes	no	0.845	0.795	0.327	6e-52
Q96GC9	406	Vacuole membrane protein	yes	no	0.845	0.795	0.327	7e-52
Q0VCK9	406	Vacuole membrane protein	yes	no	0.882	0.830	0.319	1e-51
Q54NL4	403	Vacuole membrane protein	yes	no	0.866	0.821	0.317	3e-48
Q9XWU8	458	Ectopic P granules protei	yes	no	0.858	0.716	0.316	1e-46

>sp|Q68EQ9|VMP1_XENTR Vacuole membrane protein 1 OS=Xenopus tropicalis GN=vmp1 PE=2 SV=1

 Score =  209 bits (531), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 132/397 (33%), Positives = 219/397 (55%), Gaps = 54/397 (13%)

Query: 3   FMADLREKHQQELENLTLTTQPFKTIKLFILGVIQYLKRSVLYLLAKGGWLMLSCTVVAA 62
           F++D + + ++E +++ L  +P  T++ FIL V+  LK   + L  +   +++S  ++ A
Sbjct: 29  FLSDRKSRDREERQSIVLWRKPLITLQYFILEVLITLKDWSIRLWHRR-MMVVSVLLLLA 87

Query: 63  LGILLVTIDGPHEKHLEELSEYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALFTI 122
           +  ++  I+G H+++++ + +   +  +WV LG+ SS+GLG+GLHTF+LYLGPHIA  TI
Sbjct: 88  VLSVVYYIEGTHQQYVQYVEKKCLWCAYWVGLGILSSVGLGTGLHTFLLYLGPHIASVTI 147

Query: 123 KAMQCGRVDLKSAPYDTIQLKRGPSWLDKDCDEFGPPLFSSSEGSRVPLSSILPQVQLEA 182
            A +C  V+    PY                DE   P    +EG+ + L +I+ +V+LEA
Sbjct: 148 AAYECNSVNFPEPPYP---------------DEIICPDEEGTEGA-ISLWTIISKVRLEA 191

Query: 183 ILWGVGTALGELPPYFISRAASISGSRLDAMD--EFDD----SSTESD------------ 224
            +WG GTA+GELPPYF++RAA +SG   D  +  EF++    + T  D            
Sbjct: 192 CMWGAGTAIGELPPYFMARAARLSGVETDDEEYAEFEEMLEHAQTAQDFATRAKLAVQNL 251

Query: 225 ------------GVVPNPLFDLAGIMCGQFGVPFWKFFLATLIGKAIIKTHIQTVFIISV 272
                         +PNPLFDLAGI CG F VPFW FF ATLIGKAIIK HIQ +F+I  
Sbjct: 252 VQKVGFLGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAIIKMHIQKLFVIIT 311

Query: 273 CNNQLLDWIENELIWVLSLVPGFAPVLPSLVAKLHTMRAKYLKPQQPSSHIKVKKWDFSF 332
            +  +++    +++ ++ ++P   P L     +    + K L  ++ S   + + W  S+
Sbjct: 312 FSKHIVE----QMVSLIGVIPSIGPSLQKPFQEYLEAQRKKLHHKEDSGAPQSENW-LSW 366

Query: 333 ASVWNTIVWLMLMNFFVKIVTDTAQRYLKKQQDKEIA 369
           A  +  +V +M+  F + I+   AQ Y K+ Q ++++
Sbjct: 367 A--FEKLVIIMVFYFILSIINSMAQSYAKRVQQRKLS 401

Xenopus tropicalis (taxid: 8364)

>sp|Q91ZQ0|VMP1_RAT Vacuole membrane protein 1 OS=Rattus norvegicus GN=Vmp1 PE=1 SV=1

 Score =  209 bits (531), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 126/391 (32%), Positives = 205/391 (52%), Gaps = 54/391 (13%)

Query: 6   DLREKHQQELENLTLTTQPFKTIKLFILGVIQYLKRSVLYLLAKGGWLMLSCTVVAALGI 65
           + + + ++E +N+ L  QP  T++ F L  +  LK     L  +   ++    ++AAL +
Sbjct: 32  EKKRRDREERQNIVLWRQPLITLQYFSLETLVVLKEWTSKLWHRQSMVVSFFLLLAAL-V 90

Query: 66  LLVTIDGPHEKHLEELSEYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALFTIKAM 125
               ++G H+++++ + + F    +W+ LG+ SS+GLG+GLHTF+LYLGPHIA  T+ A 
Sbjct: 91  ATYYVEGAHQQYVQRIEKQFLLYAYWIGLGILSSVGLGTGLHTFLLYLGPHIASVTLAAY 150

Query: 126 QCGRVDLKSAPYDTIQLKRGPSWLDKDCDEFGPPLFSSSEGSRVPLSSILPQVQLEAILW 185
           +C  V+    PY                D+   P    +EG+ + L SI+ +V++EA +W
Sbjct: 151 ECNSVNFPEPPYP---------------DQIICPDEEGTEGA-ISLWSIISKVRIEACMW 194

Query: 186 GVGTALGELPPYFISRAASISGSRLDAMD--EFDD----SSTESD--------------- 224
           G+GTA+GELPPYF++RAA +SG+  D  +  EF++    + T  D               
Sbjct: 195 GIGTAIGELPPYFMARAARLSGAEPDDEEYQEFEEMLEHAETAQDFASRAKLAVQKLVQK 254

Query: 225 ---------GVVPNPLFDLAGIMCGQFGVPFWKFFLATLIGKAIIKTHIQTVFIISVCNN 275
                      +PNPLFDLAGI CG F VPFW FF ATLIGKAIIK HIQ +F+I   + 
Sbjct: 255 VGFFGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAIIKMHIQKIFVIVTFSK 314

Query: 276 QLLDWIENELIWVLSLVPGFAPVLPSLVAKLHTMRAKYLKPQQPSSHIKVKKWDFSFASV 335
            +++    +++  +  VPG  P L     +    + + L  +  +   + + W    +  
Sbjct: 315 HIVE----QMVAFIGAVPGIGPSLQKPFQEYLEAQRQKLHHRSEAGTAQGENW---LSWT 367

Query: 336 WNTIVWLMLMNFFVKIVTDTAQRYLKKQQDK 366
           +  +V  M+  F + I+   AQ Y K+ Q +
Sbjct: 368 FEKLVVAMVCYFILSIINSMAQSYAKRIQQR 398

Stress-induced protein that, when overexpressed, promotes formation of intracellular vacuoles followed by cell death. May be involved in the cytoplasmic vacuolization of acinar cells during the early stage of acute pancreatitis. Involved in cell-cell adhesion (By similarity). Plays an essential role in formation of cell junctions (By similarity). Plays a role in the initial stages of the autophagic process through its interaction with BECN1.

Rattus norvegicus (taxid: 10116)

>sp|Q99KU0|VMP1_MOUSE Vacuole membrane protein 1 OS=Mus musculus GN=Vmp1 PE=2 SV=2

 Score =  207 bits (526), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 123/391 (31%), Positives = 205/391 (52%), Gaps = 54/391 (13%)

Query: 6   DLREKHQQELENLTLTTQPFKTIKLFILGVIQYLKRSVLYLLAKGGWLMLSCTVVAALGI 65
           + + + ++E +N+ L  QP  T++ F L  +  LK     L  +   +++S  ++ A  +
Sbjct: 32  EKKRRDREERQNIVLWRQPLITLQYFSLETLVVLKEWTSKLWHRQS-IVVSFLLLLAALV 90

Query: 66  LLVTIDGPHEKHLEELSEYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALFTIKAM 125
               ++G H+++++ + + F    +W+ LG+ SS+GLG+GLHTF+LYLGPHIA  T+ A 
Sbjct: 91  ATYYVEGAHQQYVQRIEKQFLLYAYWIGLGILSSVGLGTGLHTFLLYLGPHIASVTLAAY 150

Query: 126 QCGRVDLKSAPYDTIQLKRGPSWLDKDCDEFGPPLFSSSEGSRVPLSSILPQVQLEAILW 185
           +C  V+    PY                D+   P    +EG+ + L SI+ +V++EA +W
Sbjct: 151 ECNSVNFPEPPYP---------------DQIICPEEEGAEGA-ISLWSIISKVRIEACMW 194

Query: 186 GVGTALGELPPYFISRAASISGSRLDAMD--EFDDSSTESDGV----------------- 226
           G+GTA+GELPPYF++RAA +SG+  D  +  EF++    ++                   
Sbjct: 195 GIGTAIGELPPYFMARAARLSGAEPDDEEYQEFEEMLEHAEAAQDFASRAKLAVQKLVQK 254

Query: 227 -----------VPNPLFDLAGIMCGQFGVPFWKFFLATLIGKAIIKTHIQTVFIISVCNN 275
                      +PNPLFDLAGI CG F VPFW FF ATLIGKAIIK HIQ +F+I   + 
Sbjct: 255 VGFFGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAIIKMHIQKIFVIVTFSK 314

Query: 276 QLLDWIENELIWVLSLVPGFAPVLPSLVAKLHTMRAKYLKPQQPSSHIKVKKWDFSFASV 335
            +++    +++  +  VPG  P L     +    + + L  +  +   + + W    + +
Sbjct: 315 HIVE----QMVTFIGAVPGIGPSLQKPFQEYLEAQRQKLHHRSEAGTPQGENW---LSWM 367

Query: 336 WNTIVWLMLMNFFVKIVTDTAQRYLKKQQDK 366
           +  +V  M+  F + I+   AQ Y K+ Q +
Sbjct: 368 FEKLVVAMVCYFVLSIINSMAQNYAKRIQQR 398

Stress-induced protein that, when overexpressed, promotes formation of intracellular vacuoles followed by cell death. May be involved in the cytoplasmic vacuolization of acinar cells during the early stage of acute pancreatitis. Involved in cell-cell adhesion. Plays an essential role in formation of cell junctions (By similarity). Plays a role in the initial stages of the autophagic process through its interaction with BECN1.

Mus musculus (taxid: 10090)

>sp|Q6INE8|VMP1_XENLA Vacuole membrane protein 1 OS=Xenopus laevis GN=vmp1 PE=2 SV=1

 Score =  206 bits (525), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 131/397 (32%), Positives = 213/397 (53%), Gaps = 54/397 (13%)

Query: 3   FMADLREKHQQELENLTLTTQPFKTIKLFILGVIQYLKRSVLYLLAKGGWLMLSCTVVAA 62
           FM + + + ++E +++ L  +P  T++ FIL V+  LK   + L  +   +++S  ++ A
Sbjct: 29  FMCNRKRRDREERQSIVLWRKPLITLQYFILEVLINLKEWSVRLWHRR-MMVVSVLLLLA 87

Query: 63  LGILLVTIDGPHEKHLEELSEYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALFTI 122
           +  +   I+G H++ ++ + +   +  +WV LG+ SS+GLG+GLHTF+LYLGPHIA  TI
Sbjct: 88  VLSVAYYIEGEHQQCVQYIEKKCLWCAYWVGLGILSSVGLGTGLHTFLLYLGPHIASVTI 147

Query: 123 KAMQCGRVDLKSAPYDTIQLKRGPSWLDKDCDEFGPPLFSSSEGSRVPLSSILPQVQLEA 182
            A +C  V+    PY                DE   P    +EG+ + L +I+ +V+LEA
Sbjct: 148 AAYECNSVNFPEPPYP---------------DEIICPDEEGTEGA-ISLWTIISKVRLEA 191

Query: 183 ILWGVGTALGELPPYFISRAASISGSRLDAMD--EFDD----SSTESD------------ 224
            +WG GTA+GELPPYF++RAA +SG   D  +  EF++    + T  D            
Sbjct: 192 CMWGAGTAIGELPPYFMARAARLSGVETDDEEYAEFEEMLEHAQTAQDFATRAKLTVQNL 251

Query: 225 ------------GVVPNPLFDLAGIMCGQFGVPFWKFFLATLIGKAIIKTHIQTVFIISV 272
                         +PNPLFDLAGI CG F VPFW FF ATLIGKAIIK HIQ +F+I  
Sbjct: 252 VQKVGFLGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAIIKMHIQKLFVIIT 311

Query: 273 CNNQLLDWIENELIWVLSLVPGFAPVLPSLVAKLHTMRAKYLKPQQPSSHIKVKKWDFSF 332
            +  +++    +++ ++ ++P   P L     +    + K L  +  S   + + W    
Sbjct: 312 FSKHIVE----QMVSLIGVIPSIGPSLQKPFQEYLEAQRKKLHHKGDSGTPQSENW---L 364

Query: 333 ASVWNTIVWLMLMNFFVKIVTDTAQRYLKKQQDKEIA 369
           +  +  +V +M+  F + I+   AQ Y K+ Q K+++
Sbjct: 365 SWAFEKLVIIMVFYFILSIINSMAQSYAKRVQQKKLS 401

Xenopus laevis (taxid: 8355)

>sp|Q6NYY9|VMP1_DANRE Vacuole membrane protein 1 OS=Danio rerio GN=vmp1 PE=2 SV=1

 Score =  206 bits (524), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 136/400 (34%), Positives = 210/400 (52%), Gaps = 65/400 (16%)

Query: 5   ADLREKHQQELE---NLTLTTQPFKTIKLFILGVIQYLKRSVLYLLAKGGWLMLSCTVVA 61
           + LRE+ Q + E   +L L  +PF T++ F L     LK     L  + G + L+  V+ 
Sbjct: 28  SSLRERKQLDREERLSLVLWKRPFITLQYFFLETAITLKEWTWKLWQRRGVVFLT-VVLF 86

Query: 62  ALGILLVTIDGPHEKHLEELSEYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALFT 121
           +L  L  +I+G H+++++ L + F +  +WV LG+ SS+GLG+GLHTF+LYLGPHIA  T
Sbjct: 87  SLFSLAYSIEGAHQEYVQHLEKKFLWCAYWVGLGILSSVGLGTGLHTFLLYLGPHIASVT 146

Query: 122 IKAMQCGRVDLKSAPYDTIQLKRGPSWLDKDCDEFGPPLFSSSEGSRVPLSSILPQVQLE 181
           + A +CG V+    PY        P+ +    DE        +    + L +I+ +V+LE
Sbjct: 147 LAAYECGSVNFPEPPY--------PAQIVCPEDE--------ALQESISLWTIMSKVRLE 190

Query: 182 AILWGVGTALGELPPYFISRAASISGS--------RLDAMDEFDDSSTE----------- 222
           A +WG GTA+GELPPYF++RAA +SG+          + M E   S+ +           
Sbjct: 191 ACMWGAGTAIGELPPYFMARAARMSGADPDDEDYEEFEEMLEHSQSAQDFASRAKLAVQN 250

Query: 223 -----------SDGVVPNPLFDLAGIMCGQFGVPFWKFFLATLIGKAIIKTHIQTVFIIS 271
                      +   +PNPLFDLAGI CG F +PFW FF ATLIGKAIIK HIQ +F+I 
Sbjct: 251 MVQKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLIGKAIIKMHIQKLFVII 310

Query: 272 VCNNQLLDWIENELIWVLSLVPGFAPVLPSLVAKLHTMRAKYLKPQQPSSHIKVKKWDFS 331
             +  +++    +++ ++ ++PG         A L     +YL+ Q+   H        +
Sbjct: 311 TFSKHIVE----QMVSLIGVIPGVG-------ASLQKPFREYLEAQRTKLHNPAGDGAAA 359

Query: 332 FAS----VWNTIVWLMLMNFFVKIVTDTAQRYLKKQQDKE 367
             S    V+  +V +M+  F + I+   AQ Y K+ Q K+
Sbjct: 360 GESWLSWVFEKVVLVMVCYFILSIINSMAQSYAKRLQQKK 399

Danio rerio (taxid: 7955)

>sp|Q5R9K4|VMP1_PONAB Vacuole membrane protein 1 OS=Pongo abelii GN=VMP1 PE=2 SV=1

 Score =  205 bits (521), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 126/385 (32%), Positives = 203/385 (52%), Gaps = 62/385 (16%)

Query: 16  ENLTLTTQPFKTIKLFILGVIQYLKRSVLYLLAKGGWLMLSCTVVAALGILLVTIDGPHE 75
           +N+ L  QP  T++ F L ++  LK     L  +   +++S  ++ A+ I    ++G H+
Sbjct: 42  QNIVLWRQPLITLQYFSLEILVILKEWTSKLWHRQS-IVVSFLLLLAVLIATYYVEGAHQ 100

Query: 76  KHLEELSEYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALFTIKAMQCGRVDLKSA 135
           ++++ + + F    +W+ LG+ SS+GLG+GLHTF+LYLGPHIA  T+ A +C  V+    
Sbjct: 101 QYVQRIEKQFLLYAYWIGLGILSSVGLGTGLHTFLLYLGPHIASVTLAAYECNSVNFPEP 160

Query: 136 PYDTIQLKRGPSWLDKDCDEFGPPLFSSSEGSRVPLSSILPQVQLEAILWGVGTALGELP 195
           PY                D+   P    +EG+ + L SI+ +V++EA +WG+GTA+GELP
Sbjct: 161 PYP---------------DQIICPDEGGTEGT-ISLWSIISKVRIEACMWGIGTAIGELP 204

Query: 196 PYFISRAASISGSRLD--AMDEFDDSSTESDGV--------------------------- 226
           PYF++RAA +SG+  D     EF++    ++                             
Sbjct: 205 PYFMARAARLSGAEPDDEEYQEFEEMLEHAESAQDFASRAKLAVQKLVQKVGFFGILACA 264

Query: 227 -VPNPLFDLAGIMCGQFGVPFWKFFLATLIGKAIIKTHIQTVFIISVCNNQLLDWIENEL 285
            +PNPLFDLAGI CG F VPFW FF ATLIGKAIIK HIQ +F+I   +  +++    ++
Sbjct: 265 SIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAIIKMHIQKIFVIITFSKHIVE----QM 320

Query: 286 IWVLSLVPGFAPVLPSLVAKLHTMRAKYLKPQQPSSHIKVK----KWDFSFASVWNTIVW 341
           +  +  VPG  P        L     +YL+ Q+   H K +    + +   + ++  +V 
Sbjct: 321 VAFIGAVPGIGP-------SLQKPFQEYLEAQRQKLHHKSEMGTPQGENWLSWMFEKLVV 373

Query: 342 LMLMNFFVKIVTDTAQRYLKKQQDK 366
           +M+  F + I+   AQ Y K+ Q +
Sbjct: 374 VMVCYFILSIINSMAQSYAKRIQQR 398

Stress-induced protein that, when overexpressed, promotes formation of intracellular vacuoles followed by cell death. May be involved in the cytoplasmic vacuolization of acinar cells during the early stage of acute pancreatitis. Involved in cell-cell adhesion. Plays an essential role in formation of cell junctions. Plays a role in the initial stages of the autophagic process through its interaction with BECN1.

Pongo abelii (taxid: 9601)

>sp|Q96GC9|VMP1_HUMAN Vacuole membrane protein 1 OS=Homo sapiens GN=VMP1 PE=1 SV=1

 Score =  204 bits (520), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 126/385 (32%), Positives = 203/385 (52%), Gaps = 62/385 (16%)

Query: 16  ENLTLTTQPFKTIKLFILGVIQYLKRSVLYLLAKGGWLMLSCTVVAALGILLVTIDGPHE 75
           +N+ L  QP  T++ F L ++  LK     L  +   +++S  ++ A+ I    ++G H+
Sbjct: 42  QNIVLWRQPLITLQYFSLEILVILKEWTSKLWHRQS-IVVSFLLLLAVLIATYYVEGVHQ 100

Query: 76  KHLEELSEYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALFTIKAMQCGRVDLKSA 135
           ++++ + + F    +W+ LG+ SS+GLG+GLHTF+LYLGPHIA  T+ A +C  V+    
Sbjct: 101 QYVQRIEKQFLLYAYWIGLGILSSVGLGTGLHTFLLYLGPHIASVTLAAYECNSVNFPEP 160

Query: 136 PYDTIQLKRGPSWLDKDCDEFGPPLFSSSEGSRVPLSSILPQVQLEAILWGVGTALGELP 195
           PY                D+   P    +EG+ + L SI+ +V++EA +WG+GTA+GELP
Sbjct: 161 PYP---------------DQIICPDEEGTEGT-ISLWSIISKVRIEACMWGIGTAIGELP 204

Query: 196 PYFISRAASISGSRLD--AMDEFDDSSTESDGV--------------------------- 226
           PYF++RAA +SG+  D     EF++    ++                             
Sbjct: 205 PYFMARAARLSGAEPDDEEYQEFEEMLEHAESAQDFASRAKLAVQKLVQKVGFFGILACA 264

Query: 227 -VPNPLFDLAGIMCGQFGVPFWKFFLATLIGKAIIKTHIQTVFIISVCNNQLLDWIENEL 285
            +PNPLFDLAGI CG F VPFW FF ATLIGKAIIK HIQ +F+I   +  +++    ++
Sbjct: 265 SIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAIIKMHIQKIFVIITFSKHIVE----QM 320

Query: 286 IWVLSLVPGFAPVLPSLVAKLHTMRAKYLKPQQPSSHIKVK----KWDFSFASVWNTIVW 341
           +  +  VPG  P        L     +YL+ Q+   H K +    + +   + ++  +V 
Sbjct: 321 VAFIGAVPGIGP-------SLQKPFQEYLEAQRQKLHHKSEMGTPQGENWLSWMFEKLVV 373

Query: 342 LMLMNFFVKIVTDTAQRYLKKQQDK 366
           +M+  F + I+   AQ Y K+ Q +
Sbjct: 374 VMVCYFILSIINSMAQSYAKRIQQR 398

Stress-induced protein that, when overexpressed, promotes formation of intracellular vacuoles followed by cell death. May be involved in the cytoplasmic vacuolization of acinar cells during the early stage of acute pancreatitis. Plays a role in the initial stages of the autophagic process through its interaction with BECN1 (By similarity). Involved in cell-cell adhesion. Plays an essential role in formation of cell junctions.

Homo sapiens (taxid: 9606)

>sp|Q0VCK9|VMP1_BOVIN Vacuole membrane protein 1 OS=Bos taurus GN=VMP1 PE=2 SV=1

 Score =  204 bits (519), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 125/391 (31%), Positives = 206/391 (52%), Gaps = 54/391 (13%)

Query: 6   DLREKHQQELENLTLTTQPFKTIKLFILGVIQYLKRSVLYLLAKGGWLMLSCTVVAALGI 65
           + + + ++E +N+ L  QP  T++ F L  +  LK     L  +   +++S  ++ A+  
Sbjct: 32  EKKRRDREERQNIVLWRQPLITLQYFSLETLVILKEWTSKLWHRQS-IVVSFLLLLAVLT 90

Query: 66  LLVTIDGPHEKHLEELSEYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALFTIKAM 125
               ++G H+++++ + + F    +W+ LG+ SS+GLG+GLHTF+LYLGPHIA  T+ A 
Sbjct: 91  ATYYVEGAHQQYVQRIEKQFLLYAYWIGLGILSSVGLGTGLHTFLLYLGPHIASVTLAAY 150

Query: 126 QCGRVDLKSAPYDTIQLKRGPSWLDKDCDEFGPPLFSSSEGSRVPLSSILPQVQLEAILW 185
           +C  V+    PY                D+   P    +EG+ + L SI+ +V++EA +W
Sbjct: 151 ECNSVNFPEPPYP---------------DQIICPDEEGTEGT-ISLWSIISKVRIEACMW 194

Query: 186 GVGTALGELPPYFISRAASISGSRLDAMD--EFDD----SSTESD--------------- 224
           G+GTA+GELPPYF++RAA +SG+  D  +  EF++    + T  D               
Sbjct: 195 GIGTAIGELPPYFMARAARLSGAEPDDEEYQEFEEMLEHAETAQDFASRAKLAVQNLVQK 254

Query: 225 ---------GVVPNPLFDLAGIMCGQFGVPFWKFFLATLIGKAIIKTHIQTVFIISVCNN 275
                      +PNPLFDLAGI CG F VPFW FF ATLIGKAIIK HIQ +F+I   + 
Sbjct: 255 VGFFGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAIIKMHIQKLFVIVAFSK 314

Query: 276 QLLDWIENELIWVLSLVPGFAPVLPSLVAKLHTMRAKYLKPQQPSSHIKVKKWDFSFASV 335
            +++    +++  +  VPG  P L     +    + + L  +      + + W    + +
Sbjct: 315 HIVE----QMVAFIGAVPGIGPSLQKPFQEYLEAQRQKLHHRSEMGTPQGENW---LSWM 367

Query: 336 WNTIVWLMLMNFFVKIVTDTAQRYLKKQQDK 366
           +  +V +M+  F + I+   AQ Y K+ Q +
Sbjct: 368 FEKLVVVMVCYFILSIINSMAQSYAKRIQQR 398

Stress-induced protein that, when overexpressed, promotes formation of intracellular vacuoles followed by cell death. May be involved in the cytoplasmic vacuolization of acinar cells during the early stage of acute pancreatitis. Involved in cell-cell adhesion. Plays an essential role in formation of cell junctions. Plays a role in the initial stages of the autophagic process through its interaction with BECN1.

Bos taurus (taxid: 9913)

>sp|Q54NL4|VMP1_DICDI Vacuole membrane protein 1 homolog OS=Dictyostelium discoideum GN=vmp1 PE=3 SV=1

 Score =  192 bits (489), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 128/403 (31%), Positives = 198/403 (49%), Gaps = 72/403 (17%)

Query: 9   EKHQQELENLTLTTQPFKTIKLFILGVIQYLKRSVLYLLAKGGWLMLSCTVVAALGILLV 68
           E+ +++ +N+ L   P KT K F+  +   L   + Y   +  +L+    + A+L  + V
Sbjct: 23  EERKEKRKNVKLLFSPIKTTKYFLYILKDTLVSGIRYFQTRP-FLLFFIALFASLTFIAV 81

Query: 69  TIDGPHEKHLEELSEYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALFTIKAMQCG 128
            + G H+K++ + S+     +WWV LGV SSIGLG+GLHTFVLYLGPHIA  T+ A +  
Sbjct: 82  YVPGEHQKYMGKYSDLISDCIWWVGLGVLSSIGLGTGLHTFVLYLGPHIAKVTLAATEWN 141

Query: 129 RVDLKSAPYDTIQLKRGPSWLDKDCDEFGPPLFSSSEGSRVPLSSILPQVQLEAILWGVG 188
            V+                      + F  P  +   G  V    IL +VQ  A+ WG G
Sbjct: 142 SVNFNVY----------------GANSFIQPATAMIGG--VSFWMILQKVQWAALFWGAG 183

Query: 189 TALGELPPYFISRAASISGSRLDAMDEF--------DDSSTESDGV-------------- 226
           TA+GELPPYF++R A + G +L+   +         D+      G+              
Sbjct: 184 TAIGELPPYFVARTARLKGLKLEQEKKLKEQQEKPIDEKDQPKKGLLERLSEKVPALIGN 243

Query: 227 -----------VPNPLFDLAGIMCGQFGVPFWKFFLATLIGKAIIKTHIQTVFIISVCNN 275
                      +PNPLFDLAGI CG F VPFWKFF AT IGKA++K HIQ  F+I   N 
Sbjct: 244 LGFFGILAFASIPNPLFDLAGITCGHFLVPFWKFFGATFIGKAVVKAHIQACFVILAFNM 303

Query: 276 QLL----DWIENELIWVLSLVPGFAPVLPSLVAKLHTMRAKYLKPQQPSSHIKVKKWDFS 331
           + L     +IE+++ ++ + +    P+L     KL++     +    P S + +      
Sbjct: 304 ETLTMVISFIEDKIPFLKNKI---QPILEKERQKLNST----VSANSPKSLVGL------ 350

Query: 332 FASVWNTIVWLMLMNFFVKIVTDTAQRYLKKQQDKEIAALTNN 374
               W+ +++LM+  F + IV  + Q YL ++ +K+I  L + 
Sbjct: 351 ---AWDCVLFLMISYFLMSIVDSSVQEYLIEKDNKKIELLKSK 390

Required for organelle biogenesis, protein secretion, and development. Required for maintaining integrity of the endoplasmic reticulum. May play a role in autophagy.

Dictyostelium discoideum (taxid: 44689)

>sp|Q9XWU8|VMP1_CAEEL Ectopic P granules protein 3 OS=Caenorhabditis elegans GN=epg-3 PE=2 SV=2

 Score =  187 bits (476), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 128/404 (31%), Positives = 194/404 (48%), Gaps = 76/404 (18%)

Query: 11  HQQELENLTLTTQPFKTIKLFILGVIQYLKRSVLYLLAKGGWLMLSCTVVAALGILLVTI 70
           ++ E E +    +P   I   ++ +          +LA    L+L+   +  L +     
Sbjct: 48  NRMERETIVFWRRPHIVIPYALMEIAHLAVELFFKILAHKTVLLLTAISIG-LAVYGYHA 106

Query: 71  DGPHEKHLEELSEYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALFTIKAMQCGRV 130
            G H++H++ + ++  +  WWV LGV SSIGLGSGLHTF++YLGPHIA  T+ A +C  +
Sbjct: 107 PGAHQEHVQTIEKHILWWSWWVLLGVLSSIGLGSGLHTFLIYLGPHIAAVTMAAYECQSL 166

Query: 131 DLKSAPY-DTIQLKRGPSWLDKDCDEFGPPLFSSSEGSRVPLSSILPQVQLEAILWGVGT 189
           D    PY ++IQ           C        S+     V    I+ +V++E++LWG GT
Sbjct: 167 DFPQPPYPESIQ-----------CP-------STKSSIAVTFWQIVAKVRVESLLWGAGT 208

Query: 190 ALGELPPYFISRAASISGSRLDAMD-----EFDDSSTESD-------------------- 224
           ALGELPPYF++RAA ISG   D  +     E  ++  ESD                    
Sbjct: 209 ALGELPPYFMARAARISGQEPDDEEYREFLELMNADKESDADQKLSIVERAKSWVEHNIH 268

Query: 225 ----------GVVPNPLFDLAGIMCGQFGVPFWKFFLATLIGKAIIKTHIQTVFIISVCN 274
                       +PNPLFDLAGI CG F VPFW FF ATLIGKA++K H+Q  F+I   +
Sbjct: 269 RLGFPGILLFASIPNPLFDLAGITCGHFLVPFWSFFGATLIGKALVKMHVQMGFVILAFS 328

Query: 275 NQLLDWIENELIWVLSLVPGFAPVLPSLVAKLHTMRAKYLKPQQPSSHIKVK----KWDF 330
           +   +      + +L  +P   P +   ++ L   + K L  + P  H +       W  
Sbjct: 329 DHHAE----NFVKILEKIPAVGPYIRQPISDLLEKQRKALH-KTPGEHSEQSTSYLAWGL 383

Query: 331 SFASVWNTIVWLMLMNFFVKIVTDTAQRY------LKKQQDKEI 368
           S       +V  M++ FF+ IV   A+ Y       K++Q+K++
Sbjct: 384 SL------MVTFMILFFFLSIVNSLAKDYHKRLWERKRRQNKDL 421

Involved in autophagy. Thought to act in autophagasome and omegasome formation.

Caenorhabditis elegans (taxid: 6239)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	382
255551449	427	vacuole membrane protein, putative [Rici	0.981	0.878	0.740	1e-173
224102045	413	predicted protein [Populus trichocarpa]	0.986	0.912	0.739	1e-169
225432616	439	PREDICTED: vacuole membrane protein 1 [V	0.992	0.863	0.704	1e-167
357480837	417	Transmembrane protein [Medicago truncatu	0.979	0.896	0.714	1e-166
224108059	393	predicted protein [Populus trichocarpa]	0.947	0.921	0.739	1e-166
42572911	406	SNARE associated Golgi protein [Arabidop	0.968	0.911	0.71	1e-164
18414346	416	SNARE associated Golgi protein [Arabidop	0.976	0.896	0.704	1e-164
449444771	424	PREDICTED: vacuole membrane protein 1-li	0.986	0.889	0.684	1e-164
16604571	416	unknown protein [Arabidopsis thaliana]	0.976	0.896	0.699	1e-163
297804772	417	predicted protein [Arabidopsis lyrata su	0.971	0.889	0.703	1e-163

>gi|255551449|ref|XP_002516770.1| vacuole membrane protein, putative [Ricinus communis] gi|223543858|gb|EEF45384.1| vacuole membrane protein, putative [Ricinus communis]

 Score =  613 bits (1581), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 300/405 (74%), Positives = 334/405 (82%), Gaps = 30/405 (7%)

Query: 7   LREKHQQELENLTLTTQPFKTIKLFILGVIQYLKRSVLYLLAKGGWLMLSCTVVAALGIL 66
           L E+ QQELENLTLTTQP KT+K FIL +IQY K+SVLYLLAKGGWLML   +VAA+GIL
Sbjct: 22  LHERQQQELENLTLTTQPLKTLKFFILAMIQYFKKSVLYLLAKGGWLMLLSIMVAAIGIL 81

Query: 67  LVTIDGPHEKHLEELSEYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALFTIKAMQ 126
           LVTIDGPHEKH++ELS Y RFGLWW+ALGVASSIGLGSGLHTFVLYLGPHIALFTIKAMQ
Sbjct: 82  LVTIDGPHEKHIDELSHYSRFGLWWIALGVASSIGLGSGLHTFVLYLGPHIALFTIKAMQ 141

Query: 127 CGRVDLKSAPYDTIQLKRGPSWLDKDCDEFGPPLFSSSEGSRVPLSSILPQVQLEAILWG 186
           CGRVDLKSA YDTIQLKRGPSWLDKDC EFG P+F  S G RVPLSSILPQVQ+EA+LWG
Sbjct: 142 CGRVDLKSAIYDTIQLKRGPSWLDKDCHEFGDPVFPLSHGLRVPLSSILPQVQIEAVLWG 201

Query: 187 VGTALGELPPYFISRAASISGSRLDAMDEFDDSSTESDGV-------------------- 226
           VGTALGELPPYFISRAAS+SGS++DAM+E + SS+E  G                     
Sbjct: 202 VGTALGELPPYFISRAASVSGSKVDAMEELNASSSEDSGFIATHLNAIKRWLLSHSQHLN 261

Query: 227 ---------VPNPLFDLAGIMCGQFGVPFWKFFLATLIGKAIIKTHIQTVFIISVCNNQL 277
                    VPNPLFDLAGIMCGQFG+ FWKFF ATLIGKAIIKTHIQTVFIISVCNNQL
Sbjct: 262 FFTILVLASVPNPLFDLAGIMCGQFGISFWKFFFATLIGKAIIKTHIQTVFIISVCNNQL 321

Query: 278 LDWIENELIWVLSLVPGFAPVLPSLVAKLHTMRAKYLKPQQP-SSHIKVKKWDFSFASVW 336
           L+W+ENELIWVLS VPG A VLP+++AKLHT++ KY+ P  P SS  KVKKWDFSFA++W
Sbjct: 322 LNWMENELIWVLSFVPGLASVLPNIIAKLHTIKEKYMAPAPPVSSSNKVKKWDFSFAALW 381

Query: 337 NTIVWLMLMNFFVKIVTDTAQRYLKKQQDKEIAALTNNSSASRQS 381
           NTIVWLML+NFF KIV  TAQRYLKKQQ+K++A LTNN S+S  S
Sbjct: 382 NTIVWLMLLNFFFKIVNATAQRYLKKQQEKQLAELTNNVSSSTHS 426

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224102045|ref|XP_002312524.1| predicted protein [Populus trichocarpa] gi|222852344|gb|EEE89891.1| predicted protein [Populus trichocarpa]

 Score =  599 bits (1544), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 301/407 (73%), Positives = 330/407 (81%), Gaps = 30/407 (7%)

Query: 5   ADLREKHQQELENLTLTTQPFKTIKLFILGVIQYLKRSVLYLLAKGGWLMLSCTVVAALG 64
           A +RE+HQQELENLTLT QPFKT+K F L ++QY KRSV YLLAKGGWLML  TVVAA+G
Sbjct: 6   ACIRERHQQELENLTLTAQPFKTLKFFALAMVQYCKRSVFYLLAKGGWLMLLSTVVAAVG 65

Query: 65  ILLVTIDGPHEKHLEELSEYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALFTIKA 124
           ++LVTID PHEKH+EELS Y RFGLWW+ALGVASSIGLGSGLHTFV+YLGPHIALFTIKA
Sbjct: 66  VVLVTIDSPHEKHVEELSHYLRFGLWWIALGVASSIGLGSGLHTFVMYLGPHIALFTIKA 125

Query: 125 MQCGRVDLKSAPYDTIQLKRGPSWLDKDCDEFGPPLFSSSEGSRVPLSSILPQVQLEAIL 184
           MQCGRVDLKSAPYDTIQLKRGPSWLD+DC E+G P+F  S G RVPLSSILPQVQ+EAIL
Sbjct: 126 MQCGRVDLKSAPYDTIQLKRGPSWLDRDCHEYGDPVFPLSHGLRVPLSSILPQVQVEAIL 185

Query: 185 WGVGTALGELPPYFISRAASISGSRLDAMDEFDDSSTESDGV------------------ 226
           WGVGTALGELPPYFISRAA +SGS LDAM+E D SS    G+                  
Sbjct: 186 WGVGTALGELPPYFISRAARMSGSNLDAMEELDASSDGDSGIVAARLKAIKHWLLNHSQH 245

Query: 227 -----------VPNPLFDLAGIMCGQFGVPFWKFFLATLIGKAIIKTHIQTVFIISVCNN 275
                      VPNPLFDLAGIMCGQFGVPFWKFFLATLIGKAI+KTHIQTVFIISVCNN
Sbjct: 246 LNFFTILVLASVPNPLFDLAGIMCGQFGVPFWKFFLATLIGKAIVKTHIQTVFIISVCNN 305

Query: 276 QLLDWIENELIWVLSLVPGFAPVLPSLVAKLHTMRAKYLKPQQP-SSHIKVKKWDFSFAS 334
           QLL+WIENELIWVL LVPGF   LP L AKLH M+ KY+ P  P S+ IKVKKWDFSF  
Sbjct: 306 QLLNWIENELIWVLGLVPGFDSALPDLTAKLHAMKEKYMAPAPPASADIKVKKWDFSFTG 365

Query: 335 VWNTIVWLMLMNFFVKIVTDTAQRYLKKQQDKEIAALTNNSSASRQS 381
           +WNT+VWLML+NFF KIV  TAQ YLKKQQ+KE+AALTN +SAS  S
Sbjct: 366 IWNTVVWLMLLNFFFKIVNATAQMYLKKQQEKELAALTNRASASTHS 412

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225432616|ref|XP_002281783.1| PREDICTED: vacuole membrane protein 1 [Vitis vinifera] gi|297737027|emb|CBI26228.3| unnamed protein product [Vitis vinifera]

 Score =  595 bits (1533), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 288/409 (70%), Positives = 333/409 (81%), Gaps = 30/409 (7%)

Query: 4   MADLREKHQQELENLTLTTQPFKTIKLFILGVIQYLKRSVLYLLAKGGWLMLSCTVVAAL 63
           ++ LRE+ QQE+ENLTL T+PFK +K FIL V+Q++K+SV YLLAKGGW+ML   V  AL
Sbjct: 24  ISGLRERQQQEMENLTLKTEPFKVLKFFILVVVQHVKQSVAYLLAKGGWVMLLSVVAMAL 83

Query: 64  GILLVTIDGPHEKHLEELSEYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALFTIK 123
           G +L+ IDGPHEKH++EL +YF FGLWW+ALG+ASSIGLGSGLHTFVLYLGPHIALFTIK
Sbjct: 84  GFVLMAIDGPHEKHVQELHQYFLFGLWWIALGIASSIGLGSGLHTFVLYLGPHIALFTIK 143

Query: 124 AMQCGRVDLKSAPYDTIQLKRGPSWLDKDCDEFGPPLFSSSEGSRVPLSSILPQVQLEAI 183
           AMQCGRVD+KSAPYDTI+LK GPSWLDKDC EFGPP+FSS    RVPLSSILPQVQ+EA+
Sbjct: 144 AMQCGRVDIKSAPYDTIRLKSGPSWLDKDCSEFGPPVFSSLHALRVPLSSILPQVQVEAV 203

Query: 184 LWGVGTALGELPPYFISRAASISGSRLDAMDEFDDSSTESDGVV---------------- 227
           LWG+GTALGELPPYFIS+AAS+SGS+ DA++E D SS E DGVV                
Sbjct: 204 LWGIGTALGELPPYFISKAASLSGSKSDAIEELDASSPEDDGVVSTHLKQIKRWFLSHSQ 263

Query: 228 -------------PNPLFDLAGIMCGQFGVPFWKFFLATLIGKAIIKTHIQTVFIISVCN 274
                        PNPLFDLAGIMCGQFG+PFWKFFLAT IGKAIIKTHIQTVFIISVCN
Sbjct: 264 HLNFFTILVLASVPNPLFDLAGIMCGQFGIPFWKFFLATFIGKAIIKTHIQTVFIISVCN 323

Query: 275 NQLLDWIENELIWVLSLVPGFAPVLPSLVAKLHTMRAKYLKPQQP-SSHIKVKKWDFSFA 333
           NQLLDWIENELIWVLSL+PGFA VLP+L++KL+ MR KYL P  P  S++KVKKWD SFA
Sbjct: 324 NQLLDWIENELIWVLSLIPGFASVLPNLISKLNAMRDKYLAPSPPVPSNMKVKKWDLSFA 383

Query: 334 SVWNTIVWLMLMNFFVKIVTDTAQRYLKKQQDKEIAALTNNSSASRQSS 382
           S+WNT+VWLML+NFF KIVT TAQ +LKKQQ+KE+ AL +  S S  S+
Sbjct: 384 SIWNTVVWLMLINFFFKIVTATAQNFLKKQQEKELLALKDELSESTVSN 432

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357480837|ref|XP_003610704.1| Transmembrane protein [Medicago truncatula] gi|217074688|gb|ACJ85704.1| unknown [Medicago truncatula] gi|355512039|gb|AES93662.1| Transmembrane protein [Medicago truncatula] gi|388502006|gb|AFK39069.1| unknown [Medicago truncatula]

 Score =  591 bits (1523), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 288/403 (71%), Positives = 322/403 (79%), Gaps = 29/403 (7%)

Query: 4   MADLREKHQQELENLTLTTQPFKTIKLFILGVIQYLKRSVLYLLAKGGWLMLSCTVVAAL 63
           ++ L EKH+ ELENLTLTTQPFKT+K   L VIQY+K+++LYLLAKGGWLML    V  L
Sbjct: 18  ISGLHEKHKMELENLTLTTQPFKTLKYSTLAVIQYIKKTMLYLLAKGGWLMLFSVAVGTL 77

Query: 64  GILLVTIDGPHEKHLEELSEYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALFTIK 123
           G++L+T+   HEKHLEE  EYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALFTIK
Sbjct: 78  GVVLMTLGCLHEKHLEEFLEYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALFTIK 137

Query: 124 AMQCGRVDLKSAPYDTIQLKRGPSWLDKDCDEFGPPLFSSSEGSRVPLSSILPQVQLEAI 183
           AMQCGRVDLKSAPYDTIQL RGPSWLDK+C +FGPPLF S  G+RVPLSSILPQVQ+EA+
Sbjct: 138 AMQCGRVDLKSAPYDTIQLNRGPSWLDKNCSQFGPPLFQSEYGTRVPLSSILPQVQMEAV 197

Query: 184 LWGVGTALGELPPYFISRAASISGSRLDAMDEFDDSSTESDGV----------------- 226
           LWG+GTA+GELPPYFISRAA +SGSR+DAM+E D   +E  GV                 
Sbjct: 198 LWGLGTAIGELPPYFISRAARLSGSRMDAMEELD---SEDKGVLNQIKCWFFSHTQHLNF 254

Query: 227 --------VPNPLFDLAGIMCGQFGVPFWKFFLATLIGKAIIKTHIQTVFIISVCNNQLL 278
                   VPNPLFDLAGIMCGQFG+PFW FFLATLIGKAIIKTHIQTVFIISVCNNQLL
Sbjct: 255 FTILVLASVPNPLFDLAGIMCGQFGIPFWNFFLATLIGKAIIKTHIQTVFIISVCNNQLL 314

Query: 279 DWIENELIWVLSLVPGFAPVLPSLVAKLHTMRAKYLKPQQP-SSHIKVKKWDFSFASVWN 337
           DWIENE IWVLS +PGFA VLP L A LH M+ KYLK   P S + K KKWDFSF S+WN
Sbjct: 315 DWIENEFIWVLSHIPGFASVLPKLTANLHAMKDKYLKAPHPVSPNTKGKKWDFSFTSIWN 374

Query: 338 TIVWLMLMNFFVKIVTDTAQRYLKKQQDKEIAALTNNSSASRQ 380
           T+VWLMLMNFF+KIV  TAQ +LKKQQ+ E+AALT  S +  Q
Sbjct: 375 TVVWLMLMNFFIKIVNSTAQTHLKKQQESEVAALTKKSDSDTQ 417

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224108059|ref|XP_002314707.1| predicted protein [Populus trichocarpa] gi|222863747|gb|EEF00878.1| predicted protein [Populus trichocarpa]

 Score =  590 bits (1522), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 290/392 (73%), Positives = 319/392 (81%), Gaps = 30/392 (7%)

Query: 20  LTTQPFKTIKLFILGVIQYLKRSVLYLLAKGGWLMLSCTVVAALGILLVTIDGPHEKHLE 79
           +T QPFKT+K F+L ++QY KRSV YLLAKGGWLML  TVVAA+GI+LVTIDGPHEKH+E
Sbjct: 1   MTGQPFKTLKFFVLAMVQYCKRSVFYLLAKGGWLMLLSTVVAAVGIVLVTIDGPHEKHVE 60

Query: 80  ELSEYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALFTIKAMQCGRVDLKSAPYDT 139
           ELS Y RFGLWW+ALGVASSIGLGSGLHTFVLYLGPHIALFTIKAMQCGRVDLKSAPYDT
Sbjct: 61  ELSNYLRFGLWWIALGVASSIGLGSGLHTFVLYLGPHIALFTIKAMQCGRVDLKSAPYDT 120

Query: 140 IQLKRGPSWLDKDCDEFGPPLFSSSEGSRVPLSSILPQVQLEAILWGVGTALGELPPYFI 199
           IQLKR PSWL KDC EFG P+F  S G RVP+SSIL QVQ+EAILWGVGTALGELPPYFI
Sbjct: 121 IQLKRVPSWLGKDCKEFGDPVFPFSHGLRVPISSILFQVQIEAILWGVGTALGELPPYFI 180

Query: 200 SRAASISGSRLDAMDEFDDSSTESDGV-----------------------------VPNP 230
           SRAA ISGS+LDAM+E D S  E+ G+                             VPNP
Sbjct: 181 SRAARISGSKLDAMEELDASLDENSGIIATRLTAIKHWLLTHSQHLNFFTILVLASVPNP 240

Query: 231 LFDLAGIMCGQFGVPFWKFFLATLIGKAIIKTHIQTVFIISVCNNQLLDWIENELIWVLS 290
           LFDLAGIMCGQFGVPFWKFF ATLIGKAI+KTHIQT+FIISVCNNQLL+WIENELIWVLS
Sbjct: 241 LFDLAGIMCGQFGVPFWKFFAATLIGKAIVKTHIQTIFIISVCNNQLLNWIENELIWVLS 300

Query: 291 LVPGFAPVLPSLVAKLHTMRAKYLKPQQP-SSHIKVKKWDFSFASVWNTIVWLMLMNFFV 349
           L+PGFAP LP L AKLH M+ KY+ P  P SS +KVK WDFSFA +WNT+VWLML+NFF 
Sbjct: 301 LIPGFAPALPHLTAKLHAMKEKYMAPAPPASSDMKVKNWDFSFAGMWNTVVWLMLLNFFF 360

Query: 350 KIVTDTAQRYLKKQQDKEIAALTNNSSASRQS 381
           KIV  TAQ YLKKQQ+KEIAALTN++SA   S
Sbjct: 361 KIVNSTAQSYLKKQQEKEIAALTNSASALTHS 392

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42572911|ref|NP_974552.1| SNARE associated Golgi protein [Arabidopsis thaliana] gi|332658127|gb|AEE83527.1| SNARE associated Golgi protein [Arabidopsis thaliana]

 Score =  584 bits (1505), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 284/400 (71%), Positives = 321/400 (80%), Gaps = 30/400 (7%)

Query: 5   ADLREKHQQELENLTLTTQPFKTIKLFILGVIQYLKRSVLYLLAKGGWLMLSCTVVAALG 64
           A LREKH++E+ENLTLTTQP  T+KLF+   IQY+KRS+ YLLA GGW +L  T++   G
Sbjct: 6   ATLREKHEKEVENLTLTTQPLNTLKLFVEATIQYIKRSISYLLAHGGWFILITTLLVVSG 65

Query: 65  ILLVTIDGPHEKHLEELSEYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALFTIKA 124
            LLVT+DGPH KH+EE+ EY R+GLWW+ALGVASSIGLGSGLHTFVLYLGPHIALFT+KA
Sbjct: 66  GLLVTVDGPHGKHVEEVLEYVRYGLWWIALGVASSIGLGSGLHTFVLYLGPHIALFTLKA 125

Query: 125 MQCGRVDLKSAPYDTIQLKRGPSWLDKDCDEFGPPLFSSSEGSRVPLSSILPQVQLEAIL 184
             CGRVDLKSAPYDTIQLKR PSWLDK C EFGPPL  S+ GSRVPL+SILPQVQLEAIL
Sbjct: 126 TLCGRVDLKSAPYDTIQLKRVPSWLDKSCSEFGPPLMISAAGSRVPLTSILPQVQLEAIL 185

Query: 185 WGVGTALGELPPYFISRAASISGSRLDAMDEFDDSSTESDGV------------------ 226
           WG+GTALGELPPYFISRAASISGS +D M+E D SSTE  G                   
Sbjct: 186 WGIGTALGELPPYFISRAASISGSTVDGMEELDGSSTEDSGFMATHLNRVKRWLLTHSQH 245

Query: 227 -----------VPNPLFDLAGIMCGQFGVPFWKFFLATLIGKAIIKTHIQTVFIISVCNN 275
                      VPNPLFDLAGIMCGQFG+PFW+FFLATLIGKAIIKTHIQT+FII VCNN
Sbjct: 246 LNFFTVLVLASVPNPLFDLAGIMCGQFGIPFWEFFLATLIGKAIIKTHIQTIFIICVCNN 305

Query: 276 QLLDWIENELIWVLSLVPGFAPVLPSLVAKLHTMRAKYLKPQQP-SSHIKVKKWDFSFAS 334
           QLLDW+ENELIW+LS VPG A +LP L AKLH M+ KY+    P  SHIKVKKWDFSFAS
Sbjct: 306 QLLDWMENELIWILSHVPGLASMLPGLTAKLHAMKEKYIDAPSPVPSHIKVKKWDFSFAS 365

Query: 335 VWNTIVWLMLMNFFVKIVTDTAQRYLKKQQDKEIAALTNN 374
           +WN IVWLML+NFFVKIVT TAQR+LKK+Q+KE+A LT++
Sbjct: 366 IWNGIVWLMLLNFFVKIVTATAQRHLKKKQEKEMATLTHS 405

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18414346|ref|NP_567450.1| SNARE associated Golgi protein [Arabidopsis thaliana] gi|53749170|gb|AAU90070.1| At4g14950 [Arabidopsis thaliana] gi|332658128|gb|AEE83528.1| SNARE associated Golgi protein [Arabidopsis thaliana]

 Score =  583 bits (1503), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 284/403 (70%), Positives = 323/403 (80%), Gaps = 30/403 (7%)

Query: 2   VFMADLREKHQQELENLTLTTQPFKTIKLFILGVIQYLKRSVLYLLAKGGWLMLSCTVVA 61
           V ++ LREKH++E+ENLTLTTQP  T+KLF+   IQY+KRS+ YLLA GGW +L  T++ 
Sbjct: 13  VAISALREKHEKEVENLTLTTQPLNTLKLFVEATIQYIKRSISYLLAHGGWFILITTLLV 72

Query: 62  ALGILLVTIDGPHEKHLEELSEYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALFT 121
             G LLVT+DGPH KH+EE+ EY R+GLWW+ALGVASSIGLGSGLHTFVLYLGPHIALFT
Sbjct: 73  VSGGLLVTVDGPHGKHVEEVLEYVRYGLWWIALGVASSIGLGSGLHTFVLYLGPHIALFT 132

Query: 122 IKAMQCGRVDLKSAPYDTIQLKRGPSWLDKDCDEFGPPLFSSSEGSRVPLSSILPQVQLE 181
           +KA  CGRVDLKSAPYDTIQLKR PSWLDK C EFGPPL  S+ GSRVPL+SILPQVQLE
Sbjct: 133 LKATLCGRVDLKSAPYDTIQLKRVPSWLDKSCSEFGPPLMISAAGSRVPLTSILPQVQLE 192

Query: 182 AILWGVGTALGELPPYFISRAASISGSRLDAMDEFDDSSTESDGV--------------- 226
           AILWG+GTALGELPPYFISRAASISGS +D M+E D SSTE  G                
Sbjct: 193 AILWGIGTALGELPPYFISRAASISGSTVDGMEELDGSSTEDSGFMATHLNRVKRWLLTH 252

Query: 227 --------------VPNPLFDLAGIMCGQFGVPFWKFFLATLIGKAIIKTHIQTVFIISV 272
                         VPNPLFDLAGIMCGQFG+PFW+FFLATLIGKAIIKTHIQT+FII V
Sbjct: 253 SQHLNFFTVLVLASVPNPLFDLAGIMCGQFGIPFWEFFLATLIGKAIIKTHIQTIFIICV 312

Query: 273 CNNQLLDWIENELIWVLSLVPGFAPVLPSLVAKLHTMRAKYLKPQQP-SSHIKVKKWDFS 331
           CNNQLLDW+ENELIW+LS VPG A +LP L AKLH M+ KY+    P  SHIKVKKWDFS
Sbjct: 313 CNNQLLDWMENELIWILSHVPGLASMLPGLTAKLHAMKEKYIDAPSPVPSHIKVKKWDFS 372

Query: 332 FASVWNTIVWLMLMNFFVKIVTDTAQRYLKKQQDKEIAALTNN 374
           FAS+WN IVWLML+NFFVKIVT TAQR+LKK+Q+KE+A LT++
Sbjct: 373 FASIWNGIVWLMLLNFFVKIVTATAQRHLKKKQEKEMATLTHS 415

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449444771|ref|XP_004140147.1| PREDICTED: vacuole membrane protein 1-like [Cucumis sativus] gi|449481070|ref|XP_004156073.1| PREDICTED: vacuole membrane protein 1-like [Cucumis sativus]

 Score =  583 bits (1502), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 282/412 (68%), Positives = 334/412 (81%), Gaps = 35/412 (8%)

Query: 2   VFMADLREKHQQELENLTLTTQPFKTIKLFILGVIQYLKRSVLYLLAKGGWLMLSCTVVA 61
           V +++LR+K +QELENLTL  QPFKT+K FILGV+QY KRS+ Y+LAKGGWL+L   ++ 
Sbjct: 17  VSISELRKKQKQELENLTLVNQPFKTLKFFILGVLQYSKRSIAYILAKGGWLLLLNLIIG 76

Query: 62  ALGILLVTIDGPHEKHLEELSEYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALFT 121
           A GIL++TI+GPHEKH+EE+ +YF +GLWWV LGVASSIGLGSGLHTFVLYLGPHI  FT
Sbjct: 77  AAGILILTIEGPHEKHVEEIVKYFDYGLWWVILGVASSIGLGSGLHTFVLYLGPHIGFFT 136

Query: 122 IKAMQCGRVDLKSAPYDTIQLKRGPSWLDKDCDEFGPPLFSSSEGSRVPLSSILPQVQLE 181
           IKA+QCGRVDLKSA YDTIQLKRGPSWL+K+C EFGPPLF+    S+VPLSSILP VQ+E
Sbjct: 137 IKAVQCGRVDLKSATYDTIQLKRGPSWLEKECSEFGPPLFT----SQVPLSSILPMVQVE 192

Query: 182 AILWGVGTALGELPPYFISRAASISGSRLDAMDEFDDSSTESDGV--------------- 226
           AILWG+GTALGELPPYFISRAA +SG+R +AM+E D SS ES+G                
Sbjct: 193 AILWGIGTALGELPPYFISRAARLSGARSEAMEELDASSRESNGFIPTYLNRVKRWFLSH 252

Query: 227 --------------VPNPLFDLAGIMCGQFGVPFWKFFLATLIGKAIIKTHIQTVFIISV 272
                         VPNPLFDLAGIMCGQFG+PFW+FF ATL+GKAIIKTHIQT+FII+V
Sbjct: 253 AQHLNFLTILLLASVPNPLFDLAGIMCGQFGIPFWEFFFATLVGKAIIKTHIQTIFIIAV 312

Query: 273 CNNQLLDWIENELIWVLSLVPGFAPVLPSLVAKLHTMRAKYLKP--QQPSSHIKVKKWDF 330
           CNNQLLDWIENELIW+LS VPGF+ VLP L+AKL+ ++AKYLK   Q  +++ KVKKWDF
Sbjct: 313 CNNQLLDWIENELIWILSFVPGFSSVLPGLIAKLNAIKAKYLKAPSQAMTTNPKVKKWDF 372

Query: 331 SFASVWNTIVWLMLMNFFVKIVTDTAQRYLKKQQDKEIAALTNNSSASRQSS 382
           S +S+WNTIVWLM+MNF +KI+T TAQRYLKKQQDKE+AALTN   AS  S+
Sbjct: 373 SVSSIWNTIVWLMIMNFSIKIMTSTAQRYLKKQQDKELAALTNKVPASTCSN 424

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|16604571|gb|AAL24087.1| unknown protein [Arabidopsis thaliana]

 Score =  579 bits (1493), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 282/403 (69%), Positives = 322/403 (79%), Gaps = 30/403 (7%)

Query: 2   VFMADLREKHQQELENLTLTTQPFKTIKLFILGVIQYLKRSVLYLLAKGGWLMLSCTVVA 61
           V ++ LREKH++E+ENLTLTTQP  T+KLF+   IQY+KRS+ YLLA GGW +L  T++ 
Sbjct: 13  VAISALREKHEKEVENLTLTTQPLNTLKLFVEATIQYIKRSISYLLAHGGWFILITTLLV 72

Query: 62  ALGILLVTIDGPHEKHLEELSEYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALFT 121
             G LLVT+DGPH KH+EE+  Y R+GLWW+ALGVASSIGLGSGLHTFVLYLGPHIALFT
Sbjct: 73  VSGGLLVTVDGPHGKHVEEVLGYVRYGLWWIALGVASSIGLGSGLHTFVLYLGPHIALFT 132

Query: 122 IKAMQCGRVDLKSAPYDTIQLKRGPSWLDKDCDEFGPPLFSSSEGSRVPLSSILPQVQLE 181
           +KA  CGRVDLKSAPYDTIQLKR PSWLDK C EFGPPL  S+ GSRVPL+SILPQVQLE
Sbjct: 133 LKATLCGRVDLKSAPYDTIQLKRVPSWLDKSCSEFGPPLMISAAGSRVPLTSILPQVQLE 192

Query: 182 AILWGVGTALGELPPYFISRAASISGSRLDAMDEFDDSSTESDGV--------------- 226
           AILWG+GTALGELPPYFISRAASISGS +D M+E D SSTE  G                
Sbjct: 193 AILWGIGTALGELPPYFISRAASISGSTVDGMEELDGSSTEDSGFMATHLNRVKRWLLTH 252

Query: 227 --------------VPNPLFDLAGIMCGQFGVPFWKFFLATLIGKAIIKTHIQTVFIISV 272
                         VPNPLFDLAGIMCGQFG+PFW+FFLATLIGKAIIKTHIQT+FII V
Sbjct: 253 SQHLNFFTVLVLASVPNPLFDLAGIMCGQFGIPFWEFFLATLIGKAIIKTHIQTIFIICV 312

Query: 273 CNNQLLDWIENELIWVLSLVPGFAPVLPSLVAKLHTMRAKYLKPQQP-SSHIKVKKWDFS 331
           CNNQLLDW+ENELIW+LS VPG A +LP L AKLH M+ KY+    P  SHIKVKKWDFS
Sbjct: 313 CNNQLLDWMENELIWILSHVPGLASMLPGLTAKLHAMKEKYIDAPSPVPSHIKVKKWDFS 372

Query: 332 FASVWNTIVWLMLMNFFVKIVTDTAQRYLKKQQDKEIAALTNN 374
           FAS+WN +VWLML+NFFVKIVT TAQR+LKK+Q+KE+A LT++
Sbjct: 373 FASIWNGMVWLMLLNFFVKIVTATAQRHLKKKQEKEMATLTHS 415

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297804772|ref|XP_002870270.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297316106|gb|EFH46529.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  579 bits (1492), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 283/402 (70%), Positives = 324/402 (80%), Gaps = 31/402 (7%)

Query: 4   MADLREKHQQELENLTLTTQPFKTIKLFILGVIQYLKRSVLYLLAKGGWLMLSCTVVAAL 63
           ++ LREKH++E+ENLTLTTQP  T+KLF+   IQY+KRS+ YL+A GGW +L  T++ A 
Sbjct: 15  ISALREKHEKEVENLTLTTQPLNTLKLFVEATIQYIKRSISYLVAHGGWFILITTLLVAS 74

Query: 64  GILLVTIDGPHEKHLEELSEYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALFTIK 123
           G LLVT+DGPH KH+EE+ EY R+GLWW+ALGVASSIGLGSGLHTFVLYLGPHIALFT+K
Sbjct: 75  GGLLVTVDGPHGKHVEEVLEYVRYGLWWIALGVASSIGLGSGLHTFVLYLGPHIALFTLK 134

Query: 124 AMQCGRVDLKSAPYDTIQLKRGPSWLDKDCDEFGPPLFSSSEGSRVPLSSILPQVQLEAI 183
           A  CGRVDLKSAPYDTIQLKR PSWLDK C EFGPPL  S+ GSRVPL+SILPQVQLEAI
Sbjct: 135 ATLCGRVDLKSAPYDTIQLKRVPSWLDKSCSEFGPPLMISAAGSRVPLTSILPQVQLEAI 194

Query: 184 LWGVGTALGELPPYFISRAASISGSRLDAMDEFDDSSTESDGV----------------- 226
           LWG+GTALGELPPYFISRAASISGS +D M+E D SS+E  G                  
Sbjct: 195 LWGIGTALGELPPYFISRAASISGSTVDGMEELDGSSSEDSGFMATYLNRIKRWLLTHSQ 254

Query: 227 ------------VPNPLFDLAGIMCGQFGVPFWKFFLATLIGKAIIKTHIQTVFIISVCN 274
                       VPNPLFDLAGIMCGQFG+PFW+FFLATLIGKAIIKTHIQT+FII VCN
Sbjct: 255 HLNFFTVLVLASVPNPLFDLAGIMCGQFGIPFWEFFLATLIGKAIIKTHIQTIFIICVCN 314

Query: 275 NQLLDWIENELIWVLSLVPGFAPVLPSLVAKLHTMRAKYLKPQQP-SSHIK-VKKWDFSF 332
           NQLLDW+ENELIW+LS VPG A +LP L AKLH M+ KY+    P  SHIK VKKWDFSF
Sbjct: 315 NQLLDWMENELIWILSHVPGLASMLPGLTAKLHAMKEKYIDAPSPVPSHIKVVKKWDFSF 374

Query: 333 ASVWNTIVWLMLMNFFVKIVTDTAQRYLKKQQDKEIAALTNN 374
           AS+WN IVWLML+NFFVKIVT TAQR+LKK+Q+KE+AALT++
Sbjct: 375 ASIWNGIVWLMLLNFFVKIVTATAQRHLKKKQEKEMAALTHS 416

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	382
TAIR|locus:2129530	416	KMS1 "AT4G14950" [Arabidopsis	0.602	0.552	0.734	1.3e-154
TAIR|locus:2207180	416	KMS2 "AT1G05360" [Arabidopsis	0.568	0.521	0.705	6.1e-144
UNIPROTKB|Q68EQ9	406	vmp1 "Vacuole membrane protein	0.892	0.839	0.343	8.3e-51
UNIPROTKB|Q6INE8	406	vmp1 "Vacuole membrane protein	0.892	0.839	0.345	4.6e-50
ZFIN|ZDB-GENE-030131-8733	406	vmp1 "vacuole membrane protein	0.884	0.832	0.355	9.5e-50
UNIPROTKB|Q5R9K4	406	VMP1 "Vacuole membrane protein	0.874	0.822	0.338	4.1e-49
RGD|70367	406	Vmp1 "vacuole membrane protein	0.871	0.820	0.340	4.1e-49
UNIPROTKB|Q96GC9	406	VMP1 "Vacuole membrane protein	0.871	0.820	0.342	6.7e-49
UNIPROTKB|F1S226	406	LOC100524644 "Uncharacterized	0.871	0.820	0.337	6.7e-49
MGI|MGI:1923159	406	Vmp1 "vacuole membrane protein	0.874	0.822	0.330	1.8e-48

TAIR|locus:2129530 KMS1 "AT4G14950" [Arabidopsis thaliana (taxid:3702)]

 Score = 897 (320.8 bits), Expect = 1.3e-154, Sum P(2) = 1.3e-154
 Identities = 169/230 (73%), Positives = 193/230 (83%)

Query:     2 VFMADLREKHQQELENLTLTTQPFKTIKLFILGVIQYLKRSVLYLLAKGGWLMLSCTVVA 61
             V ++ LREKH++E+ENLTLTTQP  T+KLF+   IQY+KRS+ YLLA GGW +L  T++ 
Sbjct:    13 VAISALREKHEKEVENLTLTTQPLNTLKLFVEATIQYIKRSISYLLAHGGWFILITTLLV 72

Query:    62 ALGILLVTIDGPHEKHLEELSEYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALFT 121
               G LLVT+DGPH KH+EE+ EY R+GLWW+ALGVASSIGLGSGLHTFVLYLGPHIALFT
Sbjct:    73 VSGGLLVTVDGPHGKHVEEVLEYVRYGLWWIALGVASSIGLGSGLHTFVLYLGPHIALFT 132

Query:   122 IKAMQCGRVDLKSAPYDTIQLKRGPSWLDKDCDEFGPPLFSSSEGSRVPLSSILPQVQLE 181
             +KA  CGRVDLKSAPYDTIQLKR PSWLDK C EFGPPL  S+ GSRVPL+SILPQVQLE
Sbjct:   133 LKATLCGRVDLKSAPYDTIQLKRVPSWLDKSCSEFGPPLMISAAGSRVPLTSILPQVQLE 192

Query:   182 AILWGVGTALGELPPYFISRAASISGSRLDAMDEFDDSSTESDGVVPNPL 231
             AILWG+GTALGELPPYFISRAASISGS +D M+E D SSTE  G +   L
Sbjct:   193 AILWGIGTALGELPPYFISRAASISGSTVDGMEELDGSSTEDSGFMATHL 242

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0005783 "endoplasmic reticulum" evidence=IDA

TAIR|locus:2207180 KMS2 "AT1G05360" [Arabidopsis thaliana (taxid:3702)]

 Score = 820 (293.7 bits), Expect = 6.1e-144, Sum P(2) = 6.1e-144
 Identities = 158/224 (70%), Positives = 183/224 (81%)

Query:     4 MADLREKHQQELENLTLTTQPFKTIKLFILGVIQYLKRSVLYLLAKGGWLMLSCTVVAAL 63
             ++ LREKHQQ+LE LTLT+QPFKT++LF++ V  Y++R   YLLA  GWL+L C++  A 
Sbjct:    14 ISGLREKHQQDLEKLTLTSQPFKTLRLFVVAVFLYVRRWSSYLLANVGWLILFCSIFVAF 73

Query:    64 GILLVTIDGPHEKHLEELSEYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALFTIK 123
               LLVT+DGPH KH+EELSEY RFGLWW+ LGVASSIGLGSGLHTFVLYLGPHIALFTIK
Sbjct:    74 AALLVTLDGPHVKHVEELSEYTRFGLWWIFLGVASSIGLGSGLHTFVLYLGPHIALFTIK 133

Query:   124 AMQCGRVDLKSAPYDTIQLKRGPSWLDKDCDEFGPPLFSSSEGSRVPLSSILPQVQLEAI 183
              MQCGRVDLKSA YDTIQLKR PSWLDK C EFG P+FSS     VPLSSILPQVQ+EAI
Sbjct:   134 VMQCGRVDLKSAIYDTIQLKRSPSWLDKPCHEFGSPVFSSG----VPLSSILPQVQIEAI 189

Query:   184 LWGVGTALGELPPYFISRAASISGSRLDAMDEFDDSSTESDGVV 227
             LWG+GTALGELPPYFISRAAS+SG +   M E +  S + +G +
Sbjct:   190 LWGLGTALGELPPYFISRAASLSGGK---MKELETCSGDDNGFI 230

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0005783 "endoplasmic reticulum" evidence=IDA

UNIPROTKB|Q68EQ9 vmp1 "Vacuole membrane protein 1" [Xenopus (Silurana) tropicalis (taxid:8364)]

 Score = 528 (190.9 bits), Expect = 8.3e-51, P = 8.3e-51
 Identities = 137/399 (34%), Positives = 221/399 (55%)

Query:     3 FMADLREKHQQELENLTLTTQPFKTIKLFILGVIQYLKRSVLYLLAKGGWLMLSCTVVAA 62
             F++D + + ++E +++ L  +P  T++ FIL V+  LK   + L  +    M+  +V+  
Sbjct:    29 FLSDRKSRDREERQSIVLWRKPLITLQYFILEVLITLKDWSIRLWHRR---MMVVSVLLL 85

Query:    63 LGILLVT--IDGPHEKHLEELSEYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALF 120
             L +L V   I+G H+++++ + +   +  +WV LG+ SS+GLG+GLHTF+LYLGPHIA  
Sbjct:    86 LAVLSVVYYIEGTHQQYVQYVEKKCLWCAYWVGLGILSSVGLGTGLHTFLLYLGPHIASV 145

Query:   121 TIKAMQCGRVDLKSAPYDTIQLKRGPSWLDKDCDEFGPPLFSSSEGSRVPLSSILPQVQL 180
             TI A +C  V+    PY        P       DE   P    +EG+ + L +I+ +V+L
Sbjct:   146 TIAAYECNSVNFPEPPY--------P-------DEIICPDEEGTEGA-ISLWTIISKVRL 189

Query:   181 EAILWGVGTALGELPPYFISRAASISGSRLDAMD--EFDD----SSTESD---------- 224
             EA +WG GTA+GELPPYF++RAA +SG   D  +  EF++    + T  D          
Sbjct:   190 EACMWGAGTAIGELPPYFMARAARLSGVETDDEEYAEFEEMLEHAQTAQDFATRAKLAVQ 249

Query:   225 ---------GV-----VPNPLFDLAGIMCGQFGVPFWKFFLATLIGKAIIKTHIQTVFII 270
                      G+     +PNPLFDLAGI CG F VPFW FF ATLIGKAIIK HIQ +F+I
Sbjct:   250 NLVQKVGFLGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAIIKMHIQKLFVI 309

Query:   271 SVCNNQLLDWIENELIWVLSLVPGFAPVLPSLVAKLHTMRAKYLKPQQPSSHIKVKKWDF 330
                +  +++    +++ ++ ++P   P L     +    + K L  ++ S   + + W  
Sbjct:   310 ITFSKHIVE----QMVSLIGVIPSIGPSLQKPFQEYLEAQRKKLHHKEDSGAPQSENW-L 364

Query:   331 SFASVWNTIVWLMLMNFFVKIVTDTAQRYLKKQQDKEIA 369
             S+A  +  +V +M+  F + I+   AQ Y K+ Q ++++
Sbjct:   365 SWA--FEKLVIIMVFYFILSIINSMAQSYAKRVQQRKLS 401

GO:0005783 "endoplasmic reticulum" evidence=ISS

UNIPROTKB|Q6INE8 vmp1 "Vacuole membrane protein 1" [Xenopus laevis (taxid:8355)]

 Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
 Identities = 138/399 (34%), Positives = 218/399 (54%)

Query:     3 FMADLREKHQQELENLTLTTQPFKTIKLFILGVIQYLKRSVLYLLAKGGWLMLSCTVVAA 62
             FM + + + ++E +++ L  +P  T++ FIL V+  LK   + L  +    M+  +V+  
Sbjct:    29 FMCNRKRRDREERQSIVLWRKPLITLQYFILEVLINLKEWSVRLWHRR---MMVVSVLLL 85

Query:    63 LGILLVT--IDGPHEKHLEELSEYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALF 120
             L +L V   I+G H++ ++ + +   +  +WV LG+ SS+GLG+GLHTF+LYLGPHIA  
Sbjct:    86 LAVLSVAYYIEGEHQQCVQYIEKKCLWCAYWVGLGILSSVGLGTGLHTFLLYLGPHIASV 145

Query:   121 TIKAMQCGRVDLKSAPYDTIQLKRGPSWLDKDCDEFGPPLFSSSEGSRVPLSSILPQVQL 180
             TI A +C  V+    PY        P       DE   P    +EG+ + L +I+ +V+L
Sbjct:   146 TIAAYECNSVNFPEPPY--------P-------DEIICPDEEGTEGA-ISLWTIISKVRL 189

Query:   181 EAILWGVGTALGELPPYFISRAASISGSRLDAMD--EFDD----SSTESD---------- 224
             EA +WG GTA+GELPPYF++RAA +SG   D  +  EF++    + T  D          
Sbjct:   190 EACMWGAGTAIGELPPYFMARAARLSGVETDDEEYAEFEEMLEHAQTAQDFATRAKLTVQ 249

Query:   225 ---------GV-----VPNPLFDLAGIMCGQFGVPFWKFFLATLIGKAIIKTHIQTVFII 270
                      G+     +PNPLFDLAGI CG F VPFW FF ATLIGKAIIK HIQ +F+I
Sbjct:   250 NLVQKVGFLGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAIIKMHIQKLFVI 309

Query:   271 SVCNNQLLDWIENELIWVLSLVPGFAPVLPSLVAKLHTMRAKYLKPQQPSSHIKVKKWDF 330
                +  +++    +++ ++ ++P   P L     +    + K L  +  S   + + W  
Sbjct:   310 ITFSKHIVE----QMVSLIGVIPSIGPSLQKPFQEYLEAQRKKLHHKGDSGTPQSENW-L 364

Query:   331 SFASVWNTIVWLMLMNFFVKIVTDTAQRYLKKQQDKEIA 369
             S+A  +  +V +M+  F + I+   AQ Y K+ Q K+++
Sbjct:   365 SWA--FEKLVIIMVFYFILSIINSMAQSYAKRVQQKKLS 401

GO:0005783 "endoplasmic reticulum" evidence=ISS

ZFIN|ZDB-GENE-030131-8733 vmp1 "vacuole membrane protein 1" [Danio rerio (taxid:7955)]

 Score = 518 (187.4 bits), Expect = 9.5e-50, P = 9.5e-50
 Identities = 141/397 (35%), Positives = 214/397 (53%)

Query:     5 ADLREKHQQELE---NLTLTTQPFKTIKLFILGVIQYLKRSVLYLLAKGGWLMLSCTVVA 61
             + LRE+ Q + E   +L L  +PF T++ F L     LK     L  + G + L+  V+ 
Sbjct:    28 SSLRERKQLDREERLSLVLWKRPFITLQYFFLETAITLKEWTWKLWQRRGVVFLT-VVLF 86

Query:    62 ALGILLVTIDGPHEKHLEELSEYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALFT 121
             +L  L  +I+G H+++++ L + F +  +WV LG+ SS+GLG+GLHTF+LYLGPHIA  T
Sbjct:    87 SLFSLAYSIEGAHQEYVQHLEKKFLWCAYWVGLGILSSVGLGTGLHTFLLYLGPHIASVT 146

Query:   122 IKAMQCGRVDLKSAPYDTIQLKRGPSWLDKDCDEFGPPLFSSSEGSRVPLSSILPQVQLE 181
             + A +CG V+    PY        P+ +   C E    L  S     + L +I+ +V+LE
Sbjct:   147 LAAYECGSVNFPEPPY--------PAQIV--CPE-DEALQES-----ISLWTIMSKVRLE 190

Query:   182 AILWGVGTALGELPPYFISRAASISGSRLDAMD--EFDD----SSTESD----------- 224
             A +WG GTA+GELPPYF++RAA +SG+  D  D  EF++    S +  D           
Sbjct:   191 ACMWGAGTAIGELPPYFMARAARMSGADPDDEDYEEFEEMLEHSQSAQDFASRAKLAVQN 250

Query:   225 --------GV-----VPNPLFDLAGIMCGQFGVPFWKFFLATLIGKAIIKTHIQTVFIIS 271
                     G+     +PNPLFDLAGI CG F +PFW FF ATLIGKAIIK HIQ +F+I 
Sbjct:   251 MVQKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLIGKAIIKMHIQKLFVII 310

Query:   272 VCNNQLLDWIENELIWVLSLVPGFAPVLPSLVAK-LHTMRAKYLKPQQPSSHIKVKKWDF 330
               +  +++    +++ ++ ++PG    L     + L   R K   P    +    + W  
Sbjct:   311 TFSKHIVE----QMVSLIGVIPGVGASLQKPFREYLEAQRTKLHNPAGDGAAAG-ESW-- 363

Query:   331 SFASVWNTIVWLMLMNFFVKIVTDTAQRYLKKQQDKE 367
               + V+  +V +M+  F + I+   AQ Y K+ Q K+
Sbjct:   364 -LSWVFEKVVLVMVCYFILSIINSMAQSYAKRLQQKK 399

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005773 "vacuole" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0033116 "endoplasmic reticulum-Golgi intermediate compartment membrane" evidence=IEA

GO:0005774 "vacuolar membrane" evidence=IEA

UNIPROTKB|Q5R9K4 VMP1 "Vacuole membrane protein 1" [Pongo abelii (taxid:9601)]

 Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
 Identities = 132/390 (33%), Positives = 212/390 (54%)

Query:     8 REKHQQELENLTLTTQPFKTIKLFILGVIQYLKRSVLYLLAKGGWLMLSCTVVAALGILL 67
             + + ++E +N+ L  QP  T++ F L ++  LK     L  +   +++S  ++ A+ I  
Sbjct:    34 KRREREERQNIVLWRQPLITLQYFSLEILVILKEWTSKLWHRQS-IVVSFLLLLAVLIAT 92

Query:    68 VTIDGPHEKHLEELSEYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALFTIKAMQC 127
               ++G H+++++ + + F    +W+ LG+ SS+GLG+GLHTF+LYLGPHIA  T+ A +C
Sbjct:    93 YYVEGAHQQYVQRIEKQFLLYAYWIGLGILSSVGLGTGLHTFLLYLGPHIASVTLAAYEC 152

Query:   128 GRVDLKSAPYDTIQLKRGPSWLDKDCDEFGPPLFSSSEGSRVPLSSILPQVQLEAILWGV 187
               V+    PY        P  +   C + G      +EG+ + L SI+ +V++EA +WG+
Sbjct:   153 NSVNFPEPPY--------PDQII--CPDEG-----GTEGT-ISLWSIISKVRIEACMWGI 196

Query:   188 GTALGELPPYFISRAASISGSRLDAMD--EFDD--SSTES--D----------------- 224
             GTA+GELPPYF++RAA +SG+  D  +  EF++     ES  D                 
Sbjct:   197 GTAIGELPPYFMARAARLSGAEPDDEEYQEFEEMLEHAESAQDFASRAKLAVQKLVQKVG 256

Query:   225 --GV-----VPNPLFDLAGIMCGQFGVPFWKFFLATLIGKAIIKTHIQTVFIISVCNNQL 277
               G+     +PNPLFDLAGI CG F VPFW FF ATLIGKAIIK HIQ +F+I   +  +
Sbjct:   257 FFGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAIIKMHIQKIFVIITFSKHI 316

Query:   278 LDWIENELIWVLSLVPGFAPVLPSLVAK-LHTMRAKYLKPQQPSSHIKVKKWDFSFASVW 336
             ++    +++  +  VPG  P L     + L   R K L  +      + + W    + ++
Sbjct:   317 VE----QMVAFIGAVPGIGPSLQKPFQEYLEAQRQK-LHHKSEMGTPQGENW---LSWMF 368

Query:   337 NTIVWLMLMNFFVKIVTDTAQRYLKKQQDK 366
               +V +M+  F + I+   AQ Y K+ Q +
Sbjct:   369 EKLVVVMVCYFILSIINSMAQSYAKRIQQR 398

GO:0000421 "autophagic vacuole membrane" evidence=ISS

GO:0005783 "endoplasmic reticulum" evidence=ISS

GO:0010506 "regulation of autophagy" evidence=ISS

GO:0016337 "cell-cell adhesion" evidence=ISS

GO:0034329 "cell junction assembly" evidence=ISS

RGD|70367 Vmp1 "vacuole membrane protein 1" [Rattus norvegicus (taxid:10116)]

 Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
 Identities = 133/391 (34%), Positives = 210/391 (53%)

Query:     8 REKHQQELENLTLTTQPFKTIKLFILGVIQYLKRSVLYLLAKGGWLMLSCTVVAALGILL 67
             + + ++E +N+ L  QP  T++ F L  +  LK     L  +   ++    ++AAL +  
Sbjct:    34 KRRDREERQNIVLWRQPLITLQYFSLETLVVLKEWTSKLWHRQSMVVSFFLLLAAL-VAT 92

Query:    68 VTIDGPHEKHLEELSEYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALFTIKAMQC 127
               ++G H+++++ + + F    +W+ LG+ SS+GLG+GLHTF+LYLGPHIA  T+ A +C
Sbjct:    93 YYVEGAHQQYVQRIEKQFLLYAYWIGLGILSSVGLGTGLHTFLLYLGPHIASVTLAAYEC 152

Query:   128 GRVDLKSAPYDTIQLKRGPSWLDKDC-DEFGPPLFSSSEGSRVPLSSILPQVQLEAILWG 186
               V+    PY        P  +   C DE G      +EG+ + L SI+ +V++EA +WG
Sbjct:   153 NSVNFPEPPY--------PDQII--CPDEEG------TEGA-ISLWSIISKVRIEACMWG 195

Query:   187 VGTALGELPPYFISRAASISGSRLDAMD--EFDD----SSTESD---------------- 224
             +GTA+GELPPYF++RAA +SG+  D  +  EF++    + T  D                
Sbjct:   196 IGTAIGELPPYFMARAARLSGAEPDDEEYQEFEEMLEHAETAQDFASRAKLAVQKLVQKV 255

Query:   225 ---GV-----VPNPLFDLAGIMCGQFGVPFWKFFLATLIGKAIIKTHIQTVFIISVCNNQ 276
                G+     +PNPLFDLAGI CG F VPFW FF ATLIGKAIIK HIQ +F+I   +  
Sbjct:   256 GFFGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAIIKMHIQKIFVIVTFSKH 315

Query:   277 LLDWIENELIWVLSLVPGFAPVLPSLVAK-LHTMRAKYLKPQQPSSHIKVKKWDFSFASV 335
             +++    +++  +  VPG  P L     + L   R K L  +  +   + + W    +  
Sbjct:   316 IVE----QMVAFIGAVPGIGPSLQKPFQEYLEAQRQK-LHHRSEAGTAQGENW---LSWT 367

Query:   336 WNTIVWLMLMNFFVKIVTDTAQRYLKKQQDK 366
             +  +V  M+  F + I+   AQ Y K+ Q +
Sbjct:   368 FEKLVVAMVCYFILSIINSMAQSYAKRIQQR 398

GO:0000407 "pre-autophagosomal structure" evidence=IEA;ISO

GO:0000421 "autophagic vacuole membrane" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005783 "endoplasmic reticulum" evidence=ISO;ISS

GO:0005886 "plasma membrane" evidence=IEA

GO:0006914 "autophagy" evidence=IEA

GO:0007566 "embryo implantation" evidence=IEA;ISO

GO:0010506 "regulation of autophagy" evidence=ISO;IDA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016337 "cell-cell adhesion" evidence=ISO;ISS

GO:0033116 "endoplasmic reticulum-Golgi intermediate compartment membrane" evidence=IEA

GO:0034329 "cell junction assembly" evidence=ISO;ISS

UNIPROTKB|Q96GC9 VMP1 "Vacuole membrane protein 1" [Homo sapiens (taxid:9606)]

 Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
 Identities = 134/391 (34%), Positives = 213/391 (54%)

Query:     8 REKHQQELENLTLTTQPFKTIKLFILGVIQYLKRSVLYLLAKGGWLMLSCTVVAALGILL 67
             + + ++E +N+ L  QP  T++ F L ++  LK     L  +   +++S  ++ A+ I  
Sbjct:    34 KRREREERQNIVLWRQPLITLQYFSLEILVILKEWTSKLWHRQS-IVVSFLLLLAVLIAT 92

Query:    68 VTIDGPHEKHLEELSEYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALFTIKAMQC 127
               ++G H+++++ + + F    +W+ LG+ SS+GLG+GLHTF+LYLGPHIA  T+ A +C
Sbjct:    93 YYVEGVHQQYVQRIEKQFLLYAYWIGLGILSSVGLGTGLHTFLLYLGPHIASVTLAAYEC 152

Query:   128 GRVDLKSAPYDTIQLKRGPSWLDKDC-DEFGPPLFSSSEGSRVPLSSILPQVQLEAILWG 186
               V+    PY        P  +   C DE G      +EG+ + L SI+ +V++EA +WG
Sbjct:   153 NSVNFPEPPY--------PDQII--CPDEEG------TEGT-ISLWSIISKVRIEACMWG 195

Query:   187 VGTALGELPPYFISRAASISGSRLDAMD--EFDD--SSTES--D---------------- 224
             +GTA+GELPPYF++RAA +SG+  D  +  EF++     ES  D                
Sbjct:   196 IGTAIGELPPYFMARAARLSGAEPDDEEYQEFEEMLEHAESAQDFASRAKLAVQKLVQKV 255

Query:   225 ---GV-----VPNPLFDLAGIMCGQFGVPFWKFFLATLIGKAIIKTHIQTVFIISVCNNQ 276
                G+     +PNPLFDLAGI CG F VPFW FF ATLIGKAIIK HIQ +F+I   +  
Sbjct:   256 GFFGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAIIKMHIQKIFVIITFSKH 315

Query:   277 LLDWIENELIWVLSLVPGFAPVLPSLVAK-LHTMRAKYLKPQQPSSHIKVKKWDFSFASV 335
             +++    +++  +  VPG  P L     + L   R K L  +      + + W    + +
Sbjct:   316 IVE----QMVAFIGAVPGIGPSLQKPFQEYLEAQRQK-LHHKSEMGTPQGENW---LSWM 367

Query:   336 WNTIVWLMLMNFFVKIVTDTAQRYLKKQQDK 366
             +  +V +M+  F + I+   AQ Y K+ Q +
Sbjct:   368 FEKLVVVMVCYFILSIINSMAQSYAKRIQQR 398

GO:0006914 "autophagy" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0000407 "pre-autophagosomal structure" evidence=IEA

GO:0007566 "embryo implantation" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0033116 "endoplasmic reticulum-Golgi intermediate compartment membrane" evidence=IEA

GO:0034329 "cell junction assembly" evidence=IMP

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0010506 "regulation of autophagy" evidence=ISS

GO:0016337 "cell-cell adhesion" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0000421 "autophagic vacuole membrane" evidence=ISS

UNIPROTKB|F1S226 LOC100524644 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
 Identities = 132/391 (33%), Positives = 212/391 (54%)

Query:     8 REKHQQELENLTLTTQPFKTIKLFILGVIQYLKRSVLYLLAKGGWLMLSCTVVAALGILL 67
             + + ++E +N+ L  QP  T++ F L  +  LK     L  +   +++S  ++ A+ I  
Sbjct:    34 KRRDREERQNIVLWRQPLITLQYFSLETLVILKEWTSKLWHRQS-VVVSFLLLLAVLIAT 92

Query:    68 VTIDGPHEKHLEELSEYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALFTIKAMQC 127
               ++G H+++++ + + F    +W+ LG+ SS+GLG+GLHTF+LYLGPHIA  T+ A +C
Sbjct:    93 YYVEGAHQQYVQRIEKQFLLYAYWIGLGILSSVGLGTGLHTFLLYLGPHIASVTLAAYEC 152

Query:   128 GRVDLKSAPYDTIQLKRGPSWLDKDC-DEFGPPLFSSSEGSRVPLSSILPQVQLEAILWG 186
               V+    PY        P  +   C DE G      +EG+ + L SI+ +V++EA +WG
Sbjct:   153 NSVNFPEPPY--------PDQII--CPDEEG------TEGA-ISLWSIISKVRIEACMWG 195

Query:   187 VGTALGELPPYFISRAASISGSRLDAMD--EFDD----SSTESD---------------- 224
             +GTA+GELPPYF++RAA +SG+  D  +  EF++    +    D                
Sbjct:   196 IGTAIGELPPYFMARAARLSGAEPDDEEYQEFEEMLEHAQAAQDFASRAKLAVQNLVQKV 255

Query:   225 ---GV-----VPNPLFDLAGIMCGQFGVPFWKFFLATLIGKAIIKTHIQTVFIISVCNNQ 276
                G+     +PNPLFDLAGI CG F VPFW FF ATLIGKAIIK HIQ +F+I   +  
Sbjct:   256 GFFGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAIIKMHIQKIFVIITFSKH 315

Query:   277 LLDWIENELIWVLSLVPGFAPVLPSLVAK-LHTMRAKYLKPQQPSSHIKVKKWDFSFASV 335
             +++    +++  +  VPG  P L     + L   R K L  +     ++ + W    + +
Sbjct:   316 IVE----QMVAFIGAVPGIGPSLQKPFQEYLEAQRQK-LHHKSEMGTLQGENW---LSWL 367

Query:   336 WNTIVWLMLMNFFVKIVTDTAQRYLKKQQDK 366
             +  +V +M+  F + I+   AQ Y K+ Q +
Sbjct:   368 FEKLVVVMVCYFILSIINSMAQSYAKRIQQR 398

GO:0034329 "cell junction assembly" evidence=IEA

GO:0016337 "cell-cell adhesion" evidence=IEA

GO:0010506 "regulation of autophagy" evidence=IEA

GO:0007566 "embryo implantation" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0000407 "pre-autophagosomal structure" evidence=IEA

MGI|MGI:1923159 Vmp1 "vacuole membrane protein 1" [Mus musculus (taxid:10090)]

 Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
 Identities = 129/390 (33%), Positives = 208/390 (53%)

Query:     8 REKHQQELENLTLTTQPFKTIKLFILGVIQYLKRSVLYLLAKGGWLMLSCTVVAALGILL 67
             + + ++E +N+ L  QP  T++ F L  +  LK     L  +   ++    ++AAL +  
Sbjct:    34 KRRDREERQNIVLWRQPLITLQYFSLETLVVLKEWTSKLWHRQSIVVSFLLLLAAL-VAT 92

Query:    68 VTIDGPHEKHLEELSEYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALFTIKAMQC 127
               ++G H+++++ + + F    +W+ LG+ SS+GLG+GLHTF+LYLGPHIA  T+ A +C
Sbjct:    93 YYVEGAHQQYVQRIEKQFLLYAYWIGLGILSSVGLGTGLHTFLLYLGPHIASVTLAAYEC 152

Query:   128 GRVDLKSAPYDTIQLKRGPSWLDKDCDEFGPPLFSSSEGSRVPLSSILPQVQLEAILWGV 187
               V+    PY        P       D+   P    +EG+ + L SI+ +V++EA +WG+
Sbjct:   153 NSVNFPEPPY--------P-------DQIICPEEEGAEGA-ISLWSIISKVRIEACMWGI 196

Query:   188 GTALGELPPYFISRAASISGSRLDAMD--EFDDSSTESD--------------------- 224
             GTA+GELPPYF++RAA +SG+  D  +  EF++    ++                     
Sbjct:   197 GTAIGELPPYFMARAARLSGAEPDDEEYQEFEEMLEHAEAAQDFASRAKLAVQKLVQKVG 256

Query:   225 --GV-----VPNPLFDLAGIMCGQFGVPFWKFFLATLIGKAIIKTHIQTVFIISVCNNQL 277
               G+     +PNPLFDLAGI CG F VPFW FF ATLIGKAIIK HIQ +F+I   +  +
Sbjct:   257 FFGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAIIKMHIQKIFVIVTFSKHI 316

Query:   278 LDWIENELIWVLSLVPGFAPVLPSLVAK-LHTMRAKYLKPQQPSSHIKVKKWDFSFASVW 336
             ++    +++  +  VPG  P L     + L   R K L  +  +   + + W    + ++
Sbjct:   317 VE----QMVTFIGAVPGIGPSLQKPFQEYLEAQRQK-LHHRSEAGTPQGENW---LSWMF 368

Query:   337 NTIVWLMLMNFFVKIVTDTAQRYLKKQQDK 366
               +V  M+  F + I+   AQ Y K+ Q +
Sbjct:   369 EKLVVAMVCYFVLSIINSMAQNYAKRIQQR 398

GO:0000407 "pre-autophagosomal structure" evidence=IDA

GO:0000421 "autophagic vacuole membrane" evidence=ISO

GO:0003674 "molecular_function" evidence=ND

GO:0005773 "vacuole" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=ISO

GO:0005886 "plasma membrane" evidence=IEA

GO:0006914 "autophagy" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0007566 "embryo implantation" evidence=IDA

GO:0010506 "regulation of autophagy" evidence=ISO;IDA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016337 "cell-cell adhesion" evidence=ISO

GO:0034329 "cell junction assembly" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q0VCK9	VMP1_BOVIN	No assigned EC number	0.3196	0.8821	0.8300	yes	no
Q91ZQ0	VMP1_RAT	No assigned EC number	0.3222	0.8821	0.8300	yes	no
Q68EQ9	VMP1_XENTR	No assigned EC number	0.3324	0.8979	0.8448	yes	no
Q6NYY9	VMP1_DANRE	No assigned EC number	0.34	0.8769	0.8251	yes	no
Q99KU0	VMP1_MOUSE	No assigned EC number	0.3145	0.8821	0.8300	yes	no
Q54NL4	VMP1_DICDI	No assigned EC number	0.3176	0.8664	0.8213	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	382
pfam09335	123	pfam09335, SNARE_assoc, SNARE associated Golgi pro	0.001

>gnl|CDD|220186 pfam09335, SNARE_assoc, SNARE associated Golgi protein

 Score = 38.4 bits (90), Expect = 0.001
 Identities = 10/34 (29%), Positives = 15/34 (44%)

Query: 226 VVPNPLFDLAGIMCGQFGVPFWKFFLATLIGKAI 259
           ++P    DL   + G   V F +F L T +G   
Sbjct: 79  LLPGVPRDLVNYVAGLSRVSFRRFLLGTFLGILP 112

This is a family of SNARE associated Golgi proteins. The yeast member of this family localises with the t-SNARE Tlg2. Length = 123

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	382
KOG1109	440	consensus Vacuole membrane protein VMP1 [General f	100.0
KOG1109	440	consensus Vacuole membrane protein VMP1 [General f	98.13
PF09335	123	SNARE_assoc: SNARE associated Golgi protein; Inter	96.3
PF11044	49	TMEMspv1-c74-12: Plectrovirus spv1-c74 ORF 12 tran	90.84
COG1238	161	Predicted membrane protein [Function unknown]	81.21

>KOG1109 consensus Vacuole membrane protein VMP1 [General function prediction only]

Probab=100.00  E-value=4e-114  Score=853.27  Aligned_cols=350  Identities=40%  Similarity=0.653  Sum_probs=311.5

Q ss_pred             cHHHHHHHHHhhccCcccccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHH
Q 047604            4 MADLREKHQQELENLTLTTQPFKTIKLFILGVIQYLKRSVLYLLAKGGWLMLSCTVVAALGILLVTIDGPHEKHLEELSE   83 (382)
Q Consensus         4 ~~~~~~~~~~ere~l~Lwr~Pi~TL~yF~le~~~~l~~~~~~l~~~~~~~~~~~~l~i~~~~~l~~i~GpH~~~v~~~~~   83 (382)
                      +-+.++++|.||..++|||+|++|++||.+|+..+++.+..+|+++++|++.+..++ .+.+++|++|||||.|++++++
T Consensus        51 ~~~~~~~~R~er~~~vlwr~p~~tl~y~~~ei~~~~~~wst~Ll~~k~wLlt~~~~l-~~f~~ly~~~g~hq~~v~~l~~  129 (440)
T KOG1109|consen   51 IFLQKLRERLERCILVLWRQPLITLEYFDLEIFELLREWSTKLLAVKRWLLTFSQLL-NVFTVLYLTDGPHQVHVEQLEK  129 (440)
T ss_pred             hhHHHHHhhhhhheEEEecCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhccchHHHHHHHHHH
Confidence            447788889999999999999999999999999999999999999999988877766 5677788899999999999999


Q ss_pred             HHHHHHHHHHHHhhhhccCCcchhHHHHhhchhhHHHhHhhhhcCCCCCCCCCCccccccCCCCcccccCCCCCCCCCCC
Q 047604           84 YFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALFTIKAMQCGRVDLKSAPYDTIQLKRGPSWLDKDCDEFGPPLFSS  163 (382)
Q Consensus        84 ~~~~~~wWvgLGVLSSVGLGTGLHTflLyLgPHIa~vtlaA~eC~sl~F~~~py~~~~~~~~~~w~~~~C~~~~~~~~~~  163 (382)
                      +++|.+||++|||+|||||||||||||||||||||+||+||||||++|||+||||+          |++||++..     
T Consensus       130 ~~~~~l~WI~lgVlssigLgsGLhtfLlyLgphIaavT~aayec~s~nfp~ppYP~----------~i~Cpet~~-----  194 (440)
T KOG1109|consen  130 WTLFELWWILLGVLSSIGLGSGLHTFLLYLGPHIAAVTLAAYECNSVNFPQPPYPD----------DIICPETEE-----  194 (440)
T ss_pred             HHHHHHHHHHhcchhhccccccHHHHHHHhccccccccchhhhhcccCCCCCCCCC----------CCCCCCchh-----
Confidence            99999999999999999999999999999999999999999999999999999998          899998732     


Q ss_pred             CCCCCCChhhhhhHHHHHHHHHhhhhhccCCChHHHHHHHHhcCCCcchhh--hhhhcccCCC-----------------
Q 047604          164 SEGSRVPLSSILPQVQLEAILWGVGTALGELPPYFISRAASISGSRLDAMD--EFDDSSTESD-----------------  224 (382)
Q Consensus       164 ~~~~~vt~~~I~~kV~~ea~lWG~GTAiGELPPYf~araArlsG~~~~e~e--e~~~~~~~~~-----------------  224 (382)
                       ..+...+|+|++|||.||+|||+|||+|||||||||||||+||.++||.|  |+++....+.                 
T Consensus       195 -s~~v~~~wsi~~kVrieailwg~gtalgElppyFmaraarlsg~~p~dee~~ef~~g~~~d~e~~~~r~~r~k~wv~~~  273 (440)
T KOG1109|consen  195 -SRGVPGLWSIFSKVRIEAILWGAGTALGELPPYFMARAARLSGVEPDDEEYTEFEEGLNWDAEIALSRVHRAKSWVENQ  273 (440)
T ss_pred             -cccCccHHHHHHHHHhhhhhhccccccccCchHHHHHHHHhcCCCCcHHHhhhhhhhhhhhHHHHhhHHHHhHHHHHHH
Confidence             33445599999999999999999999999999999999999999999842  4444311100                 


Q ss_pred             ------------CCCCChhhhhhhhhccccchhHHHHHHHHHhhhhhhhhccceeeEEeeechhHHHHHHHHHHHHhhcC
Q 047604          225 ------------GVVPNPLFDLAGIMCGQFGVPFWKFFLATLIGKAIIKTHIQTVFIISVCNNQLLDWIENELIWVLSLV  292 (382)
Q Consensus       225 ------------~s~PNplFDLaGi~CGhFlvPFWtFFgATlIGKAiIK~hiQ~~fvI~~fs~~~ve~~e~~i~~~l~~v  292 (382)
                                  +|||||+|||||||||||++|||+||||||||||+||||||++|||.+||+|++|.    .+.+++.|
T Consensus       274 v~~lgffgIli~aSIpnPlfdlaGitcghflvpfw~ffGaTLigKaiikmhIq~~fVi~~f~~~~~ee----~V~~l~tV  349 (440)
T KOG1109|consen  274 VQRLGFFGILICASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAIIKMHIQKIFVIIAFNIHLFEE----RVSILDTV  349 (440)
T ss_pred             hhhcccceeEEEecCCCcchhhcccccccccchHHHHhhHHHHHHHHHHHhhheEEEEEeccHHHHHH----HHHHHhhc
Confidence                        09999999999999999999999999999999999999999999999999999996    58899999


Q ss_pred             CCCCCcchhHH-HHHHHHHHHhcCCCCC-CCccccc-chhhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhHHHHH
Q 047604          293 PGFAPVLPSLV-AKLHTMRAKYLKPQQP-SSHIKVK-KWDFSFASVWNTIVWLMLMNFFVKIVTDTAQRYLKKQQDKEIA  369 (382)
Q Consensus       293 p~~~~~l~~~~-~~l~~~k~k~~~~~~~-~~~~~~~-~~~~~ls~~~~~~V~~mi~yF~iSiVns~AQ~y~k~~~~~~~~  369 (382)
                      |++++.+|.++ +.|++||+++|+.... .+..+++ +|   +++.|+.+|+.|+|||+.||||++||+|+||+|++...
T Consensus       350 p~lg~~lr~p~~~~le~Q~~llh~~~~s~~~lk~~~~~~---~ss~~e~~V~~m~c~f~~sii~slaq~y~kki~~~~~~  426 (440)
T KOG1109|consen  350 PGLGHRLREPFRWLLEKQKQLLHSPIVSEKGLKEGESNT---LSSPFENVVENMVCYFTLSIINSLAQSYQKKIQNLFPS  426 (440)
T ss_pred             cccccchhhHHHHHHHHHHhhcccccccccccccccccc---cccchhccchhhhHHHHHHHHHhhhHHHHHHHhhhcCC
Confidence            99999999997 4789999999865433 2223333 44   99999999999999999999999999999999999887


Q ss_pred             HHhccCcc
Q 047604          370 ALTNNSSA  377 (382)
Q Consensus       370 ~~~~~~~~  377 (382)
                      ......+.
T Consensus       427 ~v~tt~~~  434 (440)
T KOG1109|consen  427 GVMTTGEI  434 (440)
T ss_pred             ccccccce
Confidence            76665543

>KOG1109 consensus Vacuole membrane protein VMP1 [General function prediction only]

Probab=98.13  E-value=2.2e-06  Score=87.35  Aligned_cols=140  Identities=34%  Similarity=0.398  Sum_probs=91.9

Q ss_pred             CCCCCChhhhhhHHHHHHHHHhhhhhccCCChHHHHHHHHhcCCCcchhhhhhh-cccCCC---C--CCCChhhhhhhhh
Q 047604          165 EGSRVPLSSILPQVQLEAILWGVGTALGELPPYFISRAASISGSRLDAMDEFDD-SSTESD---G--VVPNPLFDLAGIM  238 (382)
Q Consensus       165 ~~~~vt~~~I~~kV~~ea~lWG~GTAiGELPPYf~araArlsG~~~~e~ee~~~-~~~~~~---~--s~PNplFDLaGi~  238 (382)
                      ..++.++.+|+.+|++++.+||+|||.||+|||+.+||.+......-+.+...+ ..+..-   +  -+-=+.||+.=..
T Consensus         5 ~g~~k~~~~~~~~~~~s~~l~g~~~~~~~~~~~~~~rAG~~t~~~~~~~~~~~~R~er~~~vlwr~p~~tl~y~~~ei~~   84 (440)
T KOG1109|consen    5 AGSRKPLTSILPQVQLSKILWGIGTAEGELPMYFLSRAGLKTDPSSIFLQKLRERLERCILVLWRQPLITLEYFDLEIFE   84 (440)
T ss_pred             ccccccccccCcchhhHHHHhcccccccCCCcccccccccCCCcchhhHHHHHhhhhhheEEEecCcchhHHHhhHHHHH
Confidence            456778889999999999999999999999999999999876543322222211 111100   0  1122345554321


Q ss_pred             ccccchhHHHHHH----------HHHhhhhhhhhccceeeEEeeechhHHHHHHHHHHHHhhcCCCCCCcchhHHHHHHH
Q 047604          239 CGQFGVPFWKFFL----------ATLIGKAIIKTHIQTVFIISVCNNQLLDWIENELIWVLSLVPGFAPVLPSLVAKLHT  308 (382)
Q Consensus       239 CGhFlvPFWtFFg----------ATlIGKAiIK~hiQ~~fvI~~fs~~~ve~~e~~i~~~l~~vp~~~~~l~~~~~~l~~  308 (382)
                          +.=+|.+-.          +.+++=..+=.+  +.+.+..+++++.++++..+.|++..||+.....+-+..+|..
T Consensus        85 ----~~~~wst~Ll~~k~wLlt~~~~l~~f~~ly~--~~g~hq~~v~~l~~~~~~~l~WI~lgVlssigLgsGLhtfLly  158 (440)
T KOG1109|consen   85 ----LLREWSTKLLAVKRWLLTFSQLLNVFTVLYL--TDGPHQVHVEQLEKWTLFELWWILLGVLSSIGLGSGLHTFLLY  158 (440)
T ss_pred             ----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--ccchHHHHHHHHHHHHHHHHHHHHhcchhhccccccHHHHHHH
Confidence                223665522          222333333333  6677778899999999999999999999877777776666655


Q ss_pred             HH
Q 047604          309 MR  310 (382)
Q Consensus       309 ~k  310 (382)
                      ..
T Consensus       159 Lg  160 (440)
T KOG1109|consen  159 LG  160 (440)
T ss_pred             hc
Confidence            44

>PF09335 SNARE_assoc: SNARE associated Golgi protein; InterPro: IPR015414 This is a entry contains SNARE associated Golgi proteins

Probab=96.30  E-value=0.0018  Score=53.53  Aligned_cols=82  Identities=27%  Similarity=0.452  Sum_probs=57.6

Q ss_pred             HHHHHHHHHhhhhhccCCChHHHHHHHHhcC-C----Ccchhhh---hhhcccCCCC--------CCCChhhhhhhhhcc
Q 047604          177 QVQLEAILWGVGTALGELPPYFISRAASISG-S----RLDAMDE---FDDSSTESDG--------VVPNPLFDLAGIMCG  240 (382)
Q Consensus       177 kV~~ea~lWG~GTAiGELPPYf~araArlsG-~----~~~e~ee---~~~~~~~~~~--------s~PNplFDLaGi~CG  240 (382)
                      ....-.++-.+|+.+|.+..|+++|-..... .    +++-.+.   .++..+ +++        -+|-.-+|+.-+.||
T Consensus        15 g~~~~~~~~~~g~~~g~~~~y~lgr~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~l~~~~~~P~~P~~~~~~~ag   93 (123)
T PF09335_consen   15 GPWLGFLIATLGAVLGSLLAYLLGRYFGRRRLRRKLRKKKRIKRIERIERWFQ-KYGFWVLFLSRFIPGLPFDVVNYLAG   93 (123)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHccHHHHHHHHH
Confidence            4444666778999999999999999886311 0    1111122   333221 222        356655899999999


Q ss_pred             ccchhHHHHHHHHHhhhhh
Q 047604          241 QFGVPFWKFFLATLIGKAI  259 (382)
Q Consensus       241 hFlvPFWtFFgATlIGKAi  259 (382)
                      ..-||||+|+.++++|+.+
T Consensus        94 ~~~~~~~~f~~~~~~g~~~  112 (123)
T PF09335_consen   94 ITRMPFRRFFLASLIGKLP  112 (123)
T ss_pred             ccCCCHHHHHHHHHHHHHH
Confidence            9999999999999999975

The yeast member of this family (P36164 from SWISSPROT) localises with the t-SNARE Tlg2 [].

>PF11044 TMEMspv1-c74-12: Plectrovirus spv1-c74 ORF 12 transmembrane protein; InterPro: IPR022743 This is a group of proteins expressed by Plectroviruses

Probab=90.84  E-value=1.1  Score=33.72  Aligned_cols=43  Identities=19%  Similarity=0.278  Sum_probs=37.2

Q ss_pred             HHHHHHHHHHH-HHHHHHHHHHhhHHHHHHHHHhHHHHHHHhcc
Q 047604          332 FASVWNTIVWL-MLMNFFVKIVTDTAQRYLKKQQDKEIAALTNN  374 (382)
Q Consensus       332 ls~~~~~~V~~-mi~yF~iSiVns~AQ~y~k~~~~~~~~~~~~~  374 (382)
                      +.++|+.++++ ..+||-.||-.-.-|---|++|++++|+.+.+
T Consensus         5 lt~iFsvvIil~If~~iGl~IyQkikqIrgKkk~KKeie~ke~~   48 (49)
T PF11044_consen    5 LTTIFSVVIILGIFAWIGLSIYQKIKQIRGKKKEKKEIERKEDK   48 (49)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHhhc
Confidence            88999998887 55899999999999999999999999876543

The Plectroviruses are single-stranded DNA viruses belonging to the Inoviridae. This entry represents putative transmembrane proteins of unknown function.

>COG1238 Predicted membrane protein [Function unknown]

Probab=81.21  E-value=0.54  Score=43.24  Aligned_cols=80  Identities=23%  Similarity=0.367  Sum_probs=55.0

Q ss_pred             hHHHHHHHHHhhhhhccCCChHHHHHHHHhcCCCc------chhhhhhhcccCCCC----------CCCChhhhhhhhhc
Q 047604          176 PQVQLEAILWGVGTALGELPPYFISRAASISGSRL------DAMDEFDDSSTESDG----------VVPNPLFDLAGIMC  239 (382)
Q Consensus       176 ~kV~~ea~lWG~GTAiGELPPYf~araArlsG~~~------~e~ee~~~~~~~~~~----------s~PNplFDLaGi~C  239 (382)
                      .+....+.+=.+|.-+|-+--|+++|-+-..-.+.      +..|+.++..-++.+          -||    |+-=++|
T Consensus        49 ~~~~~~~~vAt~gs~lG~~~~y~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~ryg~~~ll~s~lp~ig----d~~t~~a  124 (161)
T COG1238          49 LNAWILALVATLGSVLGGLVNYALGRFLPEFIARRWFPGSEEALEKLQEKWYRRYGVWTLLLSWLPPIG----DVLTLLA  124 (161)
T ss_pred             CchHHHHHHHHHHhhHhHHHHHHHHhcchHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHhccccc----hHHHHHH
Confidence            34455566668899999999999999875544332      112222211001112          355    8889999


Q ss_pred             cccchhHHHHHHHHHhhhhh
Q 047604          240 GQFGVPFWKFFLATLIGKAI  259 (382)
Q Consensus       240 GhFlvPFWtFFgATlIGKAi  259 (382)
                      |=+-+|||.|..+.+|||+.
T Consensus       125 G~~~~~~~~f~~~~~igk~~  144 (161)
T COG1238         125 GWLRLNFLPFILLVFLGKAA  144 (161)
T ss_pred             HHHHccHHHHHHHHHHHHHH
Confidence            99999999999999999985

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	382
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 46.0 bits (108), Expect = 2e-05
 Identities = 65/405 (16%), Positives = 115/405 (28%), Gaps = 129/405 (31%)

Query: 5   ADLREKHQQELENLTLTTQPFKTIKLFILGVIQYLK-RSVLYLLAKGGWL----MLSC-- 57
           + +   + ++ + L    Q F   K  +  +  YLK R  L  L     +    +L    
Sbjct: 106 SMMTRMYIEQRDRLYNDNQVFA--KYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGK 163

Query: 58  TVVAALGILLVTIDGPHEKHLEELSEYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHI 117
           T VA      V +         ++     F ++W+ L   +S             L    
Sbjct: 164 TWVALD----VCLS-------YKVQCKMDFKIFWLNLKNCNSPE---------TVLEMLQ 203

Query: 118 ALFT-IKAMQCGRVD-LKSAPYDTIQLKRGPSWLDKDCDEFGPPLFSSSEGSRVPLSSIL 175
            L   I      R D   +       ++   + L +        L  S       L  +L
Sbjct: 204 KLLYQIDPNWTSRSDHSSNIKLRIHSIQ---AELRR--------LLKSKPYENCLL--VL 250

Query: 176 PQVQ----LEA------ILWGVGTALGELPPYFISRAASISGSRLDA-------MDEFDD 218
             VQ      A      IL               +R   ++   L A       +D    
Sbjct: 251 LNVQNAKAWNAFNLSCKIL-------------LTTRFKQVT-DFLSAATTTHISLDHHSM 296

Query: 219 SSTESDG------VVPNPLFDLAGIMCGQFGVPFWKFFLATLIGKAIIKTHIQTVFIISV 272
           + T  +        +     DL   +      P       ++I    I+  + T      
Sbjct: 297 TLTPDEVKSLLLKYLDCRPQDLPREVLT--TNP----RRLSIIA-ESIRDGLAT------ 343

Query: 273 CNNQLLDWIENELIWVLSLVPGFAPVLPSLVAKLHTMRAKYLKPQQPSSHIKVKK--WDF 330
                  W +N   W                 KL T+    L   +P+ +   +K     
Sbjct: 344 -------W-DN---W-----------KHVNCDKLTTIIESSLNVLEPAEY---RKMFDRL 378

Query: 331 S-F-ASVWNT-----IVWLMLMNFFVKIVTDTAQRY-LKKQQDKE 367
           S F  S         ++W  ++   V +V +   +Y L ++Q KE
Sbjct: 379 SVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKE 423

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00