Citrus Sinensis ID: 047617

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------
MVIEYANVNWDGLGFGLTPTDYMYIMNCSKGQKFSQGTLTRFGKTEMNPSSGILNYGQGLIEGLKAYRTRNERILLFRPEENAMRMQMGAERMCMSSPTIEQFVNAVKQIVHSNRRWVPPPGKGTMYIRPLLMGNGPDLGVAPASEYTFVTYASPVGNYHKGALNLVVEEKFRRATPGGTGGVKAITNYAIIYKPISEAKAKGFTDVLFLDAVTGKYVEEASTSNIFVVKENVISTPPTNGTILPGITRKSIIEIARVLGYQVEERAILVEELFDAEEVFCTGTAVVVNPVNSITYQDKRTEYKRGVGTVGQKLYEILTGIQSGCIEDEMGWTVELD
ccccccccccccccccccccccEEEEEEcccccccccEEEEccccccccccccHHHHHHHHHcccccccccccEEEEcHHHHHHHHHHcHHccccccccHHHHHHHHHHHHHHccccccccccccEEEccEEEEEcccccccccccEEEEEEEEcccccccccccEEEEccEEccccccccccccccccccccHHHHHHHHccccEEEEEEcccccEEEEccccEEEEEEccEEEcccccccccccccHHHHHHHHHHccccEEEEEEcHHccccccEEcccccEEEEcccEEEEEccEEEEEcccccHHHHHHHHHHHcccccccccccccEEEcc
cccccccccHHccccccccccEEEEEEEcccccEcccEEEEcccEEEcccEHHHHcccEEEccEEEEEEcccEEEEEcHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcHHHcccccccEEEEEEEEEEccEcccccccccEEEEEEEEEEccccHHccEEEEEccEEEEccccccccEccccHHHHHHHHHHHHHcccccEEEEccccccEEEEEccEEEEEEEccEEEEccHHHcccccHHHHHHHHHHHHccccEEEcccEccHHHHccEEEEEEcccEEEEEEEEEEcccEEEEcccccHHHHHHHHHHHcccccccccccccEEEEc
MVIEYanvnwdglgfgltptdYMYIMncskgqkfsqgtltrfgktemnpssgilnYGQGLIEGLKAYRTRNErillfrpeENAMRMQMGaermcmsspTIEQFVNAVKQIVhsnrrwvpppgkgtmyirpllmgngpdlgvapaseyTFVTyaspvgnyhkgALNLVVEEkfrratpggtggvkAITNYAIIYKpiseakakgftdvLFLDAVTGKYVEEASTSNIFVVKenvistpptngtilpgitRKSIIEIARVLGYQVEERAILVEELFDaeevfctgtavvvnpvnsityqdkrteykrgvgtvGQKLYEILTGIQsgciedemgwtveld
MVIEYAnvnwdglgfGLTPTDYMYIMNCSKGQKFSQGTLTRFGKTEMNPSSGILNYGQGLIEGLKAYRTRNERILLFRPEENAMRMQMGAERMCMSSPTIEQFVNAVKQIVhsnrrwvpppgkGTMYIRPLLMGNGPDLGVAPASEYTFVTYASPVGNYHKGALNLVVEEKFRratpggtggvkaiTNYAIIYKPISEAKAKGFTDVLFLDAVTGKYVEeastsnifvvkenvistpptngtilpgitRKSIIEIARVLGYQVEERAILVEELFDAEEVFCtgtavvvnpvnsityqdkrteykrgvgtvgQKLYEILTgiqsgciedemgwtveld
MVIEYANVNWDGLGFGLTPTDYMYIMNCSKGQKFSQGTLTRFGKTEMNPSSGILNYGQGLIEGLKAYRTRNERILLFRPEENAMRMQMGAERMCMSSPTIEQFVNAVKQIVHSNRRWVPPPGKGTMYIRPLLMGNGPDLGVAPASEYTFVTYASPVGNYHKGALNLVVEEKFRRATPGGTGGVKAITNYAIIYKPISEAKAKGFTDVLFLDAVTGKYVEEASTSNIFVVKENVISTPPTNGTILPGITRKSIIEIARVLGYQVEERAILVEELFDAEEVFCTGTAVVVNPVNSITYQDKRTEYKRGVGTVGQKLYEILTGIQSGCIEDEMGWTVELD
**IEYANVNWDGLGFGLTPTDYMYIMNCSKGQKFSQGTLTRFGKT****SSGILNYGQGLIEGLKAYRTRNERILLFRP**************CMSSPTIEQFVNAVKQIVHSNRRWVPPPGKGTMYIRPLLMGNGPDLGVAPASEYTFVTYASPVGNYHKGALNLVVEEKFRRATPGGTGGVKAITNYAIIYKPISEAKAKGFTDVLFLDAVTGKYVEEASTSNIFVVKENVISTPPTNGTILPGITRKSIIEIARVLGYQVEERAILVEELFDAEEVFCTGTAVVVNPVNSITYQDKRTEYKRGVGTVGQKLYEILTGIQSGCIEDEMGWTV***
***EYANVNWDGLGFGLTPTDYMYIMNCSKGQKFSQGTLTRFGKTEMNPSSGILNYGQGLIEGLKAYRTRNERILLFRPEENAMRMQMGAERMCMSSPTIEQFVNAVKQIVHSNRRWVPPPGKGTMYIRPLLMGNGPDLGVAPASEYTFVTYASPVGNYHKGALNLVVEEKFRRATPGGTGGVKAITNYAIIYKPISEAKAKGFTDVLFLDAVTGKYVEEASTSNIFVVKENVISTPPTNGTILPGITRKSIIEIARVLGYQVEERAILVEELFDAEEVFCTGTAVVVNPVNSITYQDKRTEYKRGVGTVGQKLYEILTGIQSGCIEDEMGWTVELD
MVIEYANVNWDGLGFGLTPTDYMYIMNCSKGQKFSQGTLTRFGKTEMNPSSGILNYGQGLIEGLKAYRTRNERILLFRPEENAMRMQMGAERMCMSSPTIEQFVNAVKQIVHSNRRWVPPPGKGTMYIRPLLMGNGPDLGVAPASEYTFVTYASPVGNYHKGALNLVVEEKFRRATPGGTGGVKAITNYAIIYKPISEAKAKGFTDVLFLDAVTGKYVEEASTSNIFVVKENVISTPPTNGTILPGITRKSIIEIARVLGYQVEERAILVEELFDAEEVFCTGTAVVVNPVNSITYQDKRTEYKRGVGTVGQKLYEILTGIQSGCIEDEMGWTVELD
****YANVNWDGLGFGLTPTDYMYIMNCSKGQKFSQGTLTRFGKTEMNPSSGILNYGQGLIEGLKAYRTRNERILLFRPEENAMRMQMGAERMCMSSPTIEQFVNAVKQIVHSNRRWVPPPGKGTMYIRPLLMGNGPDLGVAPASEYTFVTYASPVGNYHKGALNLVVEEKFRRATPGGTGGVKAITNYAIIYKPISEAKAKGFTDVLFLDAVTGKYVEEASTSNIFVVKENVISTPPTNGTILPGITRKSIIEIARVLGYQVEERAILVEELFDAEEVFCTGTAVVVNPVNSITYQDKRTEYKRGVGTVGQKLYEILTGIQSGCIEDEMGWTVELD
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MVIEYANVNWDGLGFGLTPTDYMYIMNCSKGQKFSQGTLTRFGKTEMNPSSGILNYGQGLIEGLKAYRTRNERILLFRPEENAMRMQMGAERMCMSSPTIEQFVNAVKQIVHSNRRWVPPPGKGTMYIRPLLMGNGPDLGVAPASEYTFVTYASPVGNYHKGALNLVVEEKFRRATPGGTGGVKAITNYAIIYKPISEAKAKGFTDVLFLDAVTGKYVEEASTSNIFVVKENVISTPPTNGTILPGITRKSIIEIARVLGYQVEERAILVEELFDAEEVFCTGTAVVVNPVNSITYQDKRTEYKRGVGTVGQKLYEILTGIQSGCIEDEMGWTVELD
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query337 2.2.26 [Sep-21-2011]
Q9M439388 Branched-chain-amino-acid yes no 0.988 0.858 0.625 1e-126
Q9LPM9356 Branched-chain-amino-acid no no 0.991 0.938 0.604 1e-125
Q9M401413 Branched-chain-amino-acid no no 1.0 0.815 0.619 1e-125
Q9FYA6415 Branched-chain-amino-acid no no 0.994 0.807 0.625 1e-124
Q9LPM8367 Putative branched-chain-a no no 0.991 0.910 0.607 1e-122
Q93Y32384 Branched-chain-amino-acid no no 0.988 0.867 0.610 1e-117
Q9LE06354 Methionine aminotransfera no no 0.991 0.943 0.535 1e-112
P39576363 Branched-chain-amino-acid yes no 0.961 0.892 0.386 5e-66
Q5HRJ8358 Probable branched-chain-a yes no 0.958 0.902 0.4 3e-62
Q8CQ78358 Probable branched-chain-a yes no 0.958 0.902 0.397 4e-62
>sp|Q9M439|BCAT2_ARATH Branched-chain-amino-acid aminotransferase 2, chloroplastic OS=Arabidopsis thaliana GN=BCAT2 PE=1 SV=1 Back     alignment and function desciption
 Score =  452 bits (1164), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 210/336 (62%), Positives = 267/336 (79%), Gaps = 3/336 (0%)

Query: 5   YANVNWDGLGFGLTPTDYMYIMNCSKGQKFSQGTLTRFGKTEMNPSSGILNYGQGLIEGL 64
           YA+++WD LGFGL P DYMY+M CSK  +F+QG L+ +G  +++PS+G+LNYGQ + EG 
Sbjct: 53  YADLDWDNLGFGLNPADYMYVMKCSKDGEFTQGELSPYGNIQLSPSAGVLNYGQAIYEGT 112

Query: 65  KAYRTRNERILLFRPEENAMRMQMGAERMCMSSPTIEQFVNAVKQIVHSNRRWVPPPGKG 124
           KAYR  N ++LLFRP+ NA+RM++GAERM M SP+++QFVNAVKQ   +N+RWVPP GKG
Sbjct: 113 KAYRKENGKLLLFRPDHNAIRMKLGAERMLMPSPSVDQFVNAVKQTALANKRWVPPAGKG 172

Query: 125 TMYIRPLLMGNGPDLGVAPASEYTFVTYASPVGNYHK---GALNLVVEEKFRRATPGGTG 181
           T+YIRPLLMG+GP LG+ PA EYTF+ YASPVGNY K    ALNL VEE++ RA PGG G
Sbjct: 173 TLYIRPLLMGSGPILGLGPAPEYTFIVYASPVGNYFKEGMAALNLYVEEEYVRAAPGGAG 232

Query: 182 GVKAITNYAIIYKPISEAKAKGFTDVLFLDAVTGKYVEEASTSNIFVVKENVISTPPTNG 241
           GVK+ITNYA + K +S AK++GF+DVL+LD+V  KY+EEAS+ N+FVVK   ISTP TNG
Sbjct: 233 GVKSITNYAPVLKALSRAKSRGFSDVLYLDSVKKKYLEEASSCNVFVVKGRTISTPATNG 292

Query: 242 TILPGITRKSIIEIARVLGYQVEERAILVEELFDAEEVFCTGTAVVVNPVNSITYQDKRT 301
           TIL GITRKS++EIA   GYQV E+A+ V+E+ DA+EVFCTGTAVVV PV +ITYQ+KR 
Sbjct: 293 TILEGITRKSVMEIASDQGYQVVEKAVHVDEVMDADEVFCTGTAVVVAPVGTITYQEKRV 352

Query: 302 EYKRGVGTVGQKLYEILTGIQSGCIEDEMGWTVELD 337
           EYK G  +V QKL  +L GIQ+G IED  GW  +++
Sbjct: 353 EYKTGDESVCQKLRSVLVGIQTGLIEDNKGWVTDIN 388
Converts 2-oxo acids to branched-chain amino acids. Acts on leucine, isoleucine and valine.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 6EC: .EC: 1EC: .EC: 4EC: 2
>sp|Q9LPM9|BCAT6_ARATH Branched-chain-amino-acid aminotransferase 6 OS=Arabidopsis thaliana GN=BCAT6 PE=1 SV=1 Back     alignment and function description
>sp|Q9M401|BCAT3_ARATH Branched-chain-amino-acid aminotransferase 3, chloroplastic OS=Arabidopsis thaliana GN=BCAT3 PE=1 SV=1 Back     alignment and function description
>sp|Q9FYA6|BCAT5_ARATH Branched-chain-amino-acid aminotransferase 5, chloroplastic OS=Arabidopsis thaliana GN=BCAT5 PE=1 SV=1 Back     alignment and function description
>sp|Q9LPM8|BCAT7_ARATH Putative branched-chain-amino-acid aminotransferase 7 OS=Arabidopsis thaliana GN=BCAT7 PE=5 SV=1 Back     alignment and function description
>sp|Q93Y32|BCAT1_ARATH Branched-chain-amino-acid aminotransferase 1, mitochondrial OS=Arabidopsis thaliana GN=BCAT1 PE=1 SV=2 Back     alignment and function description
>sp|Q9LE06|BCAT4_ARATH Methionine aminotransferase BCAT4 OS=Arabidopsis thaliana GN=BCAT4 PE=1 SV=1 Back     alignment and function description
>sp|P39576|ILVE2_BACSU Branched-chain-amino-acid aminotransferase 2 OS=Bacillus subtilis (strain 168) GN=ilvK PE=1 SV=5 Back     alignment and function description
>sp|Q5HRJ8|ILVE_STAEQ Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=ilvE PE=3 SV=1 Back     alignment and function description
>sp|Q8CQ78|ILVE_STAES Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=ilvE PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query337
356497021406 PREDICTED: branched-chain-amino-acid ami 0.991 0.822 0.676 1e-132
363807226412 uncharacterized protein LOC100798328 [Gl 0.991 0.810 0.673 1e-132
224103809339 predicted protein [Populus trichocarpa] 0.982 0.976 0.661 1e-132
255537936399 branched-chain amino acid aminotransfera 0.988 0.834 0.660 1e-130
449451331405 PREDICTED: branched-chain-amino-acid ami 0.976 0.812 0.662 1e-129
255689399329 branched-chain amino acid aminotransfera 0.961 0.984 0.685 1e-128
388497704411 unknown [Lotus japonicus] 0.991 0.812 0.648 1e-128
255579513417 branched-chain amino acid aminotransfera 0.991 0.800 0.639 1e-126
357482487408 Branched-chain-amino-acid aminotransfera 0.991 0.818 0.646 1e-126
288310302389 branched chain amino acid transaminase [ 0.988 0.856 0.654 1e-125
>gi|356497021|ref|XP_003517363.1| PREDICTED: branched-chain-amino-acid aminotransferase 3, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
 Score =  476 bits (1226), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 228/337 (67%), Positives = 268/337 (79%), Gaps = 3/337 (0%)

Query: 3   IEYANVNWDGLGFGLTPTDYMYIMNCSKGQKFSQGTLTRFGKTEMNPSSGILNYGQGLIE 62
           IE A++ WD LGFGL PTDYMYIM C++G  FS+G L RFG  E+NPS+G+LNYGQGL E
Sbjct: 69  IELADIEWDNLGFGLQPTDYMYIMKCTRGGTFSKGELQRFGNIELNPSAGVLNYGQGLFE 128

Query: 63  GLKAYRTRNERILLFRPEENAMRMQMGAERMCMSSPTIEQFVNAVKQIVHSNRRWVPPPG 122
           GLKAYR ++  ILLFRPEEN +RMQ+GAERMCM SPT+EQFV AVK  V +N+RWVPP G
Sbjct: 129 GLKAYRKQDGSILLFRPEENGLRMQIGAERMCMPSPTMEQFVEAVKDTVLANKRWVPPAG 188

Query: 123 KGTMYIRPLLMGNGPDLGVAPASEYTFVTYASPVGNYHKGAL---NLVVEEKFRRATPGG 179
           KG++YIRPLLMG+GP LGVAPA EYTF+ Y SPVGNY K  L   NL+VE +F RATPGG
Sbjct: 189 KGSLYIRPLLMGSGPVLGVAPAPEYTFLIYVSPVGNYFKEGLAPINLIVENEFHRATPGG 248

Query: 180 TGGVKAITNYAIIYKPISEAKAKGFTDVLFLDAVTGKYVEEASTSNIFVVKENVISTPPT 239
           TGGVK I NYA + K  SEAKAKG++DVL+LD V  +Y+EE S+ NIFVVK N+ISTP  
Sbjct: 249 TGGVKTIGNYAAVLKAQSEAKAKGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNIISTPAI 308

Query: 240 NGTILPGITRKSIIEIARVLGYQVEERAILVEELFDAEEVFCTGTAVVVNPVNSITYQDK 299
            GTILPGITRKSII++AR  G+QVEER + V+EL DA+EVFCTGTAVVV+PV SITY  K
Sbjct: 309 KGTILPGITRKSIIDVARSEGFQVEERLVSVDELLDADEVFCTGTAVVVSPVGSITYLGK 368

Query: 300 RTEYKRGVGTVGQKLYEILTGIQSGCIEDEMGWTVEL 336
           R  Y  G+G V Q+LY +LT +Q G  EDEM WTVEL
Sbjct: 369 RVTYGDGIGVVAQQLYTVLTRLQMGLTEDEMNWTVEL 405

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|363807226|ref|NP_001242355.1| uncharacterized protein LOC100798328 [Glycine max] gi|255635824|gb|ACU18260.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|224103809|ref|XP_002313202.1| predicted protein [Populus trichocarpa] gi|222849610|gb|EEE87157.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255537936|ref|XP_002510033.1| branched-chain amino acid aminotransferase, putative [Ricinus communis] gi|223550734|gb|EEF52220.1| branched-chain amino acid aminotransferase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449451331|ref|XP_004143415.1| PREDICTED: branched-chain-amino-acid aminotransferase 3, chloroplastic-like [Cucumis sativus] gi|449519406|ref|XP_004166726.1| PREDICTED: branched-chain-amino-acid aminotransferase 3, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|255689399|gb|ACU30051.1| branched-chain amino acid aminotransferase, partial [Glycine max] Back     alignment and taxonomy information
>gi|388497704|gb|AFK36918.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|255579513|ref|XP_002530599.1| branched-chain amino acid aminotransferase, putative [Ricinus communis] gi|223529847|gb|EEF31779.1| branched-chain amino acid aminotransferase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|357482487|ref|XP_003611530.1| Branched-chain-amino-acid aminotransferase [Medicago truncatula] gi|355512865|gb|AES94488.1| Branched-chain-amino-acid aminotransferase [Medicago truncatula] Back     alignment and taxonomy information
>gi|288310302|gb|ADC45390.1| branched chain amino acid transaminase [Cucumis melo] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query337
TAIR|locus:2201921388 BCAT-2 "branched-chain amino a 0.988 0.858 0.625 6.4e-115
TAIR|locus:2097320413 BCAT3 "branched-chain aminotra 0.997 0.813 0.624 8.2e-115
TAIR|locus:2031030356 AT1G50110 [Arabidopsis thalian 0.991 0.938 0.604 2.8e-114
TAIR|locus:2031040367 BCAT7 "branched-chain amino ac 0.991 0.910 0.607 5.9e-112
TAIR|locus:2201931384 BCAT-1 "branched-chain amino a 0.988 0.867 0.610 8.3e-106
TAIR|locus:2091216354 BCAT4 "branched-chain aminotra 0.991 0.943 0.535 6e-103
TIGR_CMR|GSU_0656357 GSU_0656 "branched-chain amino 0.952 0.899 0.398 2.5e-58
UNIPROTKB|A0R066368 ilvE "Branched-chain-amino-aci 0.961 0.880 0.365 3e-53
UNIPROTKB|Q10399368 ilvE "Branched-chain-amino-aci 0.958 0.877 0.360 1.2e-49
ASPGD|ASPL0000058845394 AN0385 [Emericella nidulans (t 0.964 0.824 0.365 1.6e-47
TAIR|locus:2201921 BCAT-2 "branched-chain amino acid transaminase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1133 (403.9 bits), Expect = 6.4e-115, P = 6.4e-115
 Identities = 210/336 (62%), Positives = 267/336 (79%)

Query:     5 YANVNWDGLGFGLTPTDYMYIMNCSKGQKFSQGTLTRFGKTEMNPSSGILNYGQGLIEGL 64
             YA+++WD LGFGL P DYMY+M CSK  +F+QG L+ +G  +++PS+G+LNYGQ + EG 
Sbjct:    53 YADLDWDNLGFGLNPADYMYVMKCSKDGEFTQGELSPYGNIQLSPSAGVLNYGQAIYEGT 112

Query:    65 KAYRTRNERILLFRPEENAMRMQMGAERMCMSSPTIEQFVNAVKQIVHSNRRWVPPPGKG 124
             KAYR  N ++LLFRP+ NA+RM++GAERM M SP+++QFVNAVKQ   +N+RWVPP GKG
Sbjct:   113 KAYRKENGKLLLFRPDHNAIRMKLGAERMLMPSPSVDQFVNAVKQTALANKRWVPPAGKG 172

Query:   125 TMYIRPLLMGNGPDLGVAPASEYTFVTYASPVGNYHK---GALNLVVEEKFRRATPGGTG 181
             T+YIRPLLMG+GP LG+ PA EYTF+ YASPVGNY K    ALNL VEE++ RA PGG G
Sbjct:   173 TLYIRPLLMGSGPILGLGPAPEYTFIVYASPVGNYFKEGMAALNLYVEEEYVRAAPGGAG 232

Query:   182 GVKAITNYAIIYKPISEAKAKGFTDVLFLDAVTGKYVEEASTSNIFVVKENVISTPPTNG 241
             GVK+ITNYA + K +S AK++GF+DVL+LD+V  KY+EEAS+ N+FVVK   ISTP TNG
Sbjct:   233 GVKSITNYAPVLKALSRAKSRGFSDVLYLDSVKKKYLEEASSCNVFVVKGRTISTPATNG 292

Query:   242 TILPGITRKSIIEIARVLGYQVEERAILVEELFDAEEVFCTGTAVVVNPVNSITYQDKRT 301
             TIL GITRKS++EIA   GYQV E+A+ V+E+ DA+EVFCTGTAVVV PV +ITYQ+KR 
Sbjct:   293 TILEGITRKSVMEIASDQGYQVVEKAVHVDEVMDADEVFCTGTAVVVAPVGTITYQEKRV 352

Query:   302 EYKRGVGTVGQKLYEILTGIQSGCIEDEMGWTVELD 337
             EYK G  +V QKL  +L GIQ+G IED  GW  +++
Sbjct:   353 EYKTGDESVCQKLRSVLVGIQTGLIEDNKGWVTDIN 388
GO:0003824 "catalytic activity" evidence=IEA;ISS
GO:0004084 "branched-chain-amino-acid transaminase activity" evidence=IEA;IGI
GO:0005737 "cytoplasm" evidence=ISM
GO:0005739 "mitochondrion" evidence=ISM
GO:0008152 "metabolic process" evidence=IEA
GO:0009081 "branched-chain amino acid metabolic process" evidence=IEA
GO:0009507 "chloroplast" evidence=IDA
GO:0009407 "toxin catabolic process" evidence=RCA
GO:0009744 "response to sucrose stimulus" evidence=RCA
GO:0009750 "response to fructose stimulus" evidence=RCA
TAIR|locus:2097320 BCAT3 "branched-chain aminotransferase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031030 AT1G50110 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031040 BCAT7 "branched-chain amino acid transaminase 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2201931 BCAT-1 "branched-chain amino acid transaminase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2091216 BCAT4 "branched-chain aminotransferase4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_0656 GSU_0656 "branched-chain amino acid aminotransferase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
UNIPROTKB|A0R066 ilvE "Branched-chain-amino-acid aminotransferase" [Mycobacterium smegmatis str. MC2 155 (taxid:246196)] Back     alignment and assigned GO terms
UNIPROTKB|Q10399 ilvE "Branched-chain-amino-acid aminotransferase" [Mycobacterium tuberculosis (taxid:1773)] Back     alignment and assigned GO terms
ASPGD|ASPL0000058845 AN0385 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P24288BCAT1_MOUSE2, ., 6, ., 1, ., 4, 20.33130.95840.8367yesno
Q9ZJF1ILVE_HELPJ2, ., 6, ., 1, ., 4, 20.36600.97320.9647yesno
Q9M439BCAT2_ARATH2, ., 6, ., 1, ., 4, 20.6250.98810.8582yesno
O26004ILVE_HELPY2, ., 6, ., 1, ., 4, 20.36600.97320.9647yesno
O86505ILVE_STRCO2, ., 6, ., 1, ., 4, 20.37270.94650.8812yesno
Q5HRJ8ILVE_STAEQ2, ., 6, ., 1, ., 4, 20.40.95840.9022yesno
P0AB81ILVE_ECOL62, ., 6, ., 1, ., 4, 20.30220.84860.9255yesno
Q6GJB4ILVE_STAAR2, ., 6, ., 1, ., 4, 20.38730.95250.8966yesno
Q54N47BCAT_DICDI2, ., 6, ., 1, ., 4, 20.31210.94650.8439yesno
Q5HIC1ILVE_STAAC2, ., 6, ., 1, ., 4, 20.38570.96430.9078yesno
P0A1A5ILVE_SALTY2, ., 6, ., 1, ., 4, 20.30810.83670.9126yesno
Q6GBT3ILVE_STAAS2, ., 6, ., 1, ., 4, 20.38570.96430.9078yesno
Q8CQ78ILVE_STAES2, ., 6, ., 1, ., 4, 20.39700.95840.9022yesno
O32954ILVE_MYCLE2, ., 6, ., 1, ., 4, 20.36980.95840.8777yesno
P39576ILVE2_BACSU2, ., 6, ., 1, ., 4, 20.38620.96140.8925yesno
P99138ILVE_STAAN2, ., 6, ., 1, ., 4, 20.38570.96430.9078yesno
Q10399ILVE_MYCTU2, ., 6, ., 1, ., 4, 20.35500.95840.8777yesno
P63513ILVE_STAAW2, ., 6, ., 1, ., 4, 20.38570.96430.9078yesno
P63512ILVE_STAAM2, ., 6, ., 1, ., 4, 20.38570.96430.9078yesno
P54689ILVE_HAEIN2, ., 6, ., 1, ., 4, 20.38950.97320.9562yesno
A0R066ILVE_MYCS22, ., 6, ., 1, ., 4, 20.36280.96140.8804yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.6.10.963
4th Layer2.6.1.420.946

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query337
PLN02782403 PLN02782, PLN02782, Branched-chain amino acid amin 0.0
PLN03117355 PLN03117, PLN03117, Branched-chain-amino-acid amin 1e-176
PLN02259388 PLN02259, PLN02259, branched-chain-amino-acid amin 1e-157
PLN02883384 PLN02883, PLN02883, Branched-chain amino acid amin 1e-145
PRK13357356 PRK13357, PRK13357, branched-chain amino acid amin 1e-139
cd01557279 cd01557, BCAT_beta_family, BCAT_beta_family: Branc 1e-116
TIGR01123313 TIGR01123, ilvE_II, branched-chain amino acid amin 1e-103
cd00449256 cd00449, PLPDE_IV, PyridoxaL 5'-Phosphate Dependen 2e-78
COG0115284 COG0115, IlvE, Branched-chain amino acid aminotran 9e-70
TIGR01122298 TIGR01122, ilvE_I, branched-chain amino acid amino 3e-45
PRK06606306 PRK06606, PRK06606, branched-chain amino acid amin 4e-45
pfam01063231 pfam01063, Aminotran_4, Aminotransferase class IV 2e-38
cd01558270 cd01558, D-AAT_like, D-Alanine aminotransferase (D 7e-32
PRK07544292 PRK07544, PRK07544, branched-chain amino acid amin 1e-29
PRK08320288 PRK08320, PRK08320, branched-chain amino acid amin 4e-28
PRK13356286 PRK13356, PRK13356, aminotransferase; Provisional 1e-24
cd01559249 cd01559, ADCL_like, ADCL_like: 4-Amino-4-deoxychor 1e-23
PRK12479299 PRK12479, PRK12479, branched-chain amino acid amin 8e-21
PRK06680286 PRK06680, PRK06680, D-amino acid aminotransferase; 2e-17
PRK07849292 PRK07849, PRK07849, 4-amino-4-deoxychorismate lyas 1e-16
TIGR01121276 TIGR01121, D_amino_aminoT, D-amino acid aminotrans 1e-14
TIGR03461261 TIGR03461, pabC_Proteo, aminodeoxychorismate lyase 2e-13
PRK06092268 PRK06092, PRK06092, 4-amino-4-deoxychorismate lyas 4e-12
PRK07650283 PRK07650, PRK07650, 4-amino-4-deoxychorismate lyas 6e-12
PRK12400290 PRK12400, PRK12400, D-amino acid aminotransferase; 8e-10
PLN02845336 PLN02845, PLN02845, Branched-chain-amino-acid amin 6e-06
>gnl|CDD|215418 PLN02782, PLN02782, Branched-chain amino acid aminotransferase Back     alignment and domain information 
 Score =  525 bits (1353), Expect = 0.0
 Identities = 223/339 (65%), Positives = 271/339 (79%), Gaps = 4/339 (1%)

Query: 2   VIEYANVNWDGLGFGLTPTDYMYIMNCSKGQKFSQGTLTRFGKTEMNPSSGILNYGQGLI 61
           V E A+++WD LGFGL PTDYMYIM C++  +FS+G L RFG  E++PS+G+LNYGQGL 
Sbjct: 64  VTELADIDWDNLGFGLVPTDYMYIMKCNRDGEFSKGELQRFGNIELSPSAGVLNYGQGLF 123

Query: 62  EGLKAYRTRNERILLFRPEENAMRMQMGAERMCMSSPTIEQFVNAVKQIVHSNRRWVPPP 121
           EGLKAYR  +  ILLFRPEENA+RM+ GAERMCM +PT+EQFV AVK+ V +N+RWVPPP
Sbjct: 124 EGLKAYRKEDGNILLFRPEENAIRMRNGAERMCMPAPTVEQFVEAVKETVLANKRWVPPP 183

Query: 122 GKGTMYIRPLLMGNGPDLGVAPASEYTFVTYASPVGNYHK---GALNLVVEEKFRRATPG 178
           GKG++YIRPLLMG+G  LG+APA EYTF+ Y SPVGNY K     +NL+VE +F RATPG
Sbjct: 184 GKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKEGVAPINLIVENEFHRATPG 243

Query: 179 GTGGVKAITNYAIIYKPISEAKAKGFTDVLFLDAVTGKYVEEASTSNIFVVKENVISTPP 238
           GTGGVK I NYA + K  S AKAKG++DVL+LD V  KY+EE S+ NIF+VK+NVISTP 
Sbjct: 244 GTGGVKTIGNYAAVLKAQSIAKAKGYSDVLYLDCVHKKYLEEVSSCNIFIVKDNVISTPA 303

Query: 239 TNGTILPGITRKSIIEIARVLGYQVEERAILVEELFDAEEVFCTGTAVVVNPVNSITYQD 298
             GTILPGITRKSII++AR  G+QVEER + V+EL +A+EVFCTGTAVVV+PV SITY+ 
Sbjct: 304 IKGTILPGITRKSIIDVARSQGFQVEERNVTVDELLEADEVFCTGTAVVVSPVGSITYKG 363

Query: 299 KRTEY-KRGVGTVGQKLYEILTGIQSGCIEDEMGWTVEL 336
           KR  Y + G GTV Q+LY +LT +Q G IED M WTVEL
Sbjct: 364 KRVSYGEGGFGTVSQQLYTVLTSLQMGLIEDNMNWTVEL 402

Length = 403
>gnl|CDD|178664 PLN03117, PLN03117, Branched-chain-amino-acid aminotransferase; Provisional Back     alignment and domain information
>gnl|CDD|177901 PLN02259, PLN02259, branched-chain-amino-acid aminotransferase 2 Back     alignment and domain information
>gnl|CDD|178471 PLN02883, PLN02883, Branched-chain amino acid aminotransferase Back     alignment and domain information
>gnl|CDD|237363 PRK13357, PRK13357, branched-chain amino acid aminotransferase; Provisional Back     alignment and domain information
>gnl|CDD|238798 cd01557, BCAT_beta_family, BCAT_beta_family: Branched-chain aminotransferase catalyses the transamination of the branched-chain amino acids leusine, isoleucine and valine to their respective alpha-keto acids, alpha-ketoisocaproate, alpha-keto-beta-methylvalerate and alpha-ketoisovalerate Back     alignment and domain information
>gnl|CDD|233278 TIGR01123, ilvE_II, branched-chain amino acid aminotransferase, group II Back     alignment and domain information
>gnl|CDD|238254 cd00449, PLPDE_IV, PyridoxaL 5'-Phosphate Dependent Enzymes class IV (PLPDE_IV) Back     alignment and domain information
>gnl|CDD|223193 COG0115, IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|130192 TIGR01122, ilvE_I, branched-chain amino acid aminotransferase, group I Back     alignment and domain information
>gnl|CDD|235841 PRK06606, PRK06606, branched-chain amino acid aminotransferase; Validated Back     alignment and domain information
>gnl|CDD|216275 pfam01063, Aminotran_4, Aminotransferase class IV Back     alignment and domain information
>gnl|CDD|238799 cd01558, D-AAT_like, D-Alanine aminotransferase (D-AAT_like): D-amino acid aminotransferase catalyzes transamination between D-amino acids and their respective alpha-keto acids Back     alignment and domain information
>gnl|CDD|181025 PRK07544, PRK07544, branched-chain amino acid aminotransferase; Validated Back     alignment and domain information
>gnl|CDD|236238 PRK08320, PRK08320, branched-chain amino acid aminotransferase; Reviewed Back     alignment and domain information
>gnl|CDD|237362 PRK13356, PRK13356, aminotransferase; Provisional Back     alignment and domain information
>gnl|CDD|238800 cd01559, ADCL_like, ADCL_like: 4-Amino-4-deoxychorismate lyase: is a member of the fold-type IV of PLP dependent enzymes that converts 4-amino-4-deoxychorismate (ADC) to p-aminobenzoate and pyruvate Back     alignment and domain information
>gnl|CDD|183549 PRK12479, PRK12479, branched-chain amino acid aminotransferase; Provisional Back     alignment and domain information
>gnl|CDD|180656 PRK06680, PRK06680, D-amino acid aminotransferase; Reviewed Back     alignment and domain information
>gnl|CDD|236114 PRK07849, PRK07849, 4-amino-4-deoxychorismate lyase; Provisional Back     alignment and domain information
>gnl|CDD|130191 TIGR01121, D_amino_aminoT, D-amino acid aminotransferase Back     alignment and domain information
>gnl|CDD|132501 TIGR03461, pabC_Proteo, aminodeoxychorismate lyase Back     alignment and domain information
>gnl|CDD|235696 PRK06092, PRK06092, 4-amino-4-deoxychorismate lyase; Reviewed Back     alignment and domain information
>gnl|CDD|181067 PRK07650, PRK07650, 4-amino-4-deoxychorismate lyase; Provisional Back     alignment and domain information
>gnl|CDD|171470 PRK12400, PRK12400, D-amino acid aminotransferase; Reviewed Back     alignment and domain information
>gnl|CDD|215454 PLN02845, PLN02845, Branched-chain-amino-acid aminotransferase-like protein Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 337
PLN02782403 Branched-chain amino acid aminotransferase 100.0
PLN02259388 branched-chain-amino-acid aminotransferase 2 100.0
PLN02883384 Branched-chain amino acid aminotransferase 100.0
PLN03117355 Branched-chain-amino-acid aminotransferase; Provis 100.0
PRK13357356 branched-chain amino acid aminotransferase; Provis 100.0
KOG0975379 consensus Branched chain aminotransferase BCAT1, p 100.0
TIGR01123313 ilvE_II branched-chain amino acid aminotransferase 100.0
TIGR01122298 ilvE_I branched-chain amino acid aminotransferase, 100.0
PRK06606306 branched-chain amino acid aminotransferase; Valida 100.0
PRK12479299 branched-chain amino acid aminotransferase; Provis 100.0
PRK13356286 aminotransferase; Provisional 100.0
PRK07544292 branched-chain amino acid aminotransferase; Valida 100.0
PRK08320288 branched-chain amino acid aminotransferase; Review 100.0
cd01557279 BCAT_beta_family BCAT_beta_family: Branched-chain 100.0
PRK07650283 4-amino-4-deoxychorismate lyase; Provisional 100.0
PLN02845336 Branched-chain-amino-acid aminotransferase-like pr 100.0
PRK06680286 D-amino acid aminotransferase; Reviewed 100.0
PRK12400290 D-amino acid aminotransferase; Reviewed 100.0
cd01558270 D-AAT_like D-Alanine aminotransferase (D-AAT_like) 100.0
TIGR01121276 D_amino_aminoT D-amino acid aminotransferase. Spec 100.0
PRK07849292 4-amino-4-deoxychorismate lyase; Provisional 100.0
COG0115284 IlvE Branched-chain amino acid aminotransferase/4- 100.0
PRK06092268 4-amino-4-deoxychorismate lyase; Reviewed 100.0
TIGR03461261 pabC_Proteo aminodeoxychorismate lyase. Members of 100.0
cd00449256 PLPDE_IV PyridoxaL 5'-Phosphate Dependent Enzymes 100.0
cd01559249 ADCL_like ADCL_like: 4-Amino-4-deoxychorismate lya 100.0
PRK09266266 hypothetical protein; Provisional 100.0
PF01063231 Aminotran_4: Aminotransferase class IV; InterPro: 100.0
PRK07546209 hypothetical protein; Provisional 100.0
PRK07101187 hypothetical protein; Provisional 100.0
>PLN02782 Branched-chain amino acid aminotransferase Back     alignment and domain information 
Probab=100.00  E-value=4.7e-76  Score=569.67  Aligned_cols=335  Identities=66%  Similarity=1.149  Sum_probs=311.6

Q ss_pred             cccCCCCCCCCCCCCccCCceEEEEeCCCCeeeCCeeeeCCCcccCcCCccccccceeeeeeEEEeecCCeeeecChhhH
Q 047617            3 IEYANVNWDGLGFGLTPTDYMYIMNCSKGQKFSQGTLTRFGKTEMNPSSGILNYGQGLIEGLKAYRTRNERILLFRPEEN   82 (337)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ng~~~~~~~~~i~~~d~~l~yG~gvFEt~r~~~~~~G~~~~f~l~~H   82 (337)
                      .+++++||++||||.++||||+.++|..+..|.||+++|.+++.|++.|++|+||||+|||||+|++.+|++++|++++|
T Consensus        65 ~~~~~~~~~~l~fg~~~td~m~~~~~~~~~~w~ng~ivp~~~~~i~~~d~gl~YGdgvFEg~kayr~~~G~i~lFr~d~H  144 (403)
T PLN02782         65 TELADIDWDNLGFGLVPTDYMYIMKCNRDGEFSKGELQRFGNIELSPSAGVLNYGQGLFEGLKAYRKEDGNILLFRPEEN  144 (403)
T ss_pred             cccccCCccccCCCccccCceEEEEECCCCcEeCCEEEECCCCEeChhhhHHhhhhhhhheEEEEEcCCCcEeeeChHHH
Confidence            34679999999999999999999999887889999999999999999999999999999999999988999999999999


Q ss_pred             HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCCCCCCCcceEEEEEEEEecCCCCCcCCCCCcEEEEEEeecCCccC-
Q 047617           83 AMRMQMGAERMCMSSPTIEQFVNAVKQIVHSNRRWVPPPGKGTMYIRPLLMGNGPDLGVAPASEYTFVTYASPVGNYHK-  161 (337)
Q Consensus        83 l~RL~~Sa~~l~i~~~~~~~l~~~i~~ll~~~~~~~p~~~~~~~~iR~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~-  161 (337)
                      ++||.+||++|+|+.++.++|.+++.+++++|+.|+|+.+.+.+|||++++|++..+|+.++.++++++++.|.++++. 
T Consensus       145 ~~RL~~SA~rL~lp~~~~e~l~~~i~~lv~~n~~~vP~~~~~~lyiRp~v~g~~~~lG~~~~~~~~~~i~~~p~~~~~~~  224 (403)
T PLN02782        145 AIRMRNGAERMCMPAPTVEQFVEAVKETVLANKRWVPPPGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKE  224 (403)
T ss_pred             HHHHHHHHHHhCcCCCCHHHHHHHHHHHHHhccccCCCCCCccEEEEEEEEecCCCcCcCCCCCcEEEEEEEECcccccc
Confidence            9999999999999988899999999999999999999877779999999988776788877777889999999876653 


Q ss_pred             --CceEEEEEeeceecCCCCCCCCccccchhhhHHHHHHHHHCCCCeEEEEecCCCCeEEecCceeEEEEECCEEEeCCC
Q 047617          162 --GALNLVVEEKFRRATPGGTGGVKAITNYAIIYKPISEAKAKGFTDVLFLDAVTGKYVEEASTSNIFVVKENVISTPPT  239 (337)
Q Consensus       162 --~~~~l~~~~~~~r~~~~~~~~~Kt~~~y~~~~~a~~~A~~~g~de~Llln~~~~g~v~E~s~sNvf~v~~~~l~TP~l  239 (337)
                        +++++.++++++|..|.+++++|+++||+.+++++++|+++|+||+||+|..++|+|+|++++|||++++++|+||++
T Consensus       225 g~~~v~l~v~~~~~Ra~p~g~g~~Kt~~nY~~~l~a~~eA~~~G~de~L~Ld~~~~g~V~E~~~sNlF~v~~~~l~TP~l  304 (403)
T PLN02782        225 GVAPINLIVENEFHRATPGGTGGVKTIGNYAAVLKAQSIAKAKGYSDVLYLDCVHKKYLEEVSSCNIFIVKDNVISTPAI  304 (403)
T ss_pred             CCccEEEEEeCceeecCCCCCcccchhhhHHHHHHHHHHHHHcCCCEEEEEeCCCCCEEEEcCcEEEEEEECCEEEcCCC
Confidence              478888876688999989999999889999999999999999999999995337999999999999999999999999


Q ss_pred             CCCCCCChHHHHHHHHHHHcCCcEEEEecCHHHHhccceeeeecCccceEEEEEEEeCCeEEee-CCCccHHHHHHHHHH
Q 047617          240 NGTILPGITRKSIIEIARVLGYQVEERAILVEELFDAEEVFCTGTAVVVNPVNSITYQDKRTEY-KRGVGTVGQKLYEIL  318 (337)
Q Consensus       240 ~~giL~GitR~~vl~~a~~~Gi~v~e~~i~~~eL~~adevfltnt~~gi~pV~~I~~~~~~i~~-~~~~g~~~~~L~~~~  318 (337)
                      +.+||+||||+.||++|+++|++|+|+.|+++||.+|||+|+|||+.+|+||.+|+++|+.+.+ ++++||++++|++.|
T Consensus       305 ~~~iLpGITR~svlela~~~Gi~V~Er~i~~~eL~~AdEvF~tgTa~~V~PV~~I~~~g~~~~~~~g~~Gpvt~~L~~~l  384 (403)
T PLN02782        305 KGTILPGITRKSIIDVARSQGFQVEERNVTVDELLEADEVFCTGTAVVVSPVGSITYKGKRVSYGEGGFGTVSQQLYTVL  384 (403)
T ss_pred             cCCcCcCHHHHHHHHHHHHcCCeEEEEECCHHHHhhCCEEEEccCcceEEEEEEEEECCEEEeCCCCCcCHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999888988754 457899999999999


Q ss_pred             HhhHccCCCCCCCCeEECC
Q 047617          319 TGIQSGCIEDEMGWTVELD  337 (337)
Q Consensus       319 ~~~~~~~~~~~~~w~~~~~  337 (337)
                      .++|.|+.+|.++|++.|+
T Consensus       385 ~~iq~G~~~~~~~W~~~v~  403 (403)
T PLN02782        385 TSLQMGLIEDNMNWTVELS  403 (403)
T ss_pred             HHHhcCCCCCCCCCeEECC
Confidence            9999999999999999985

>PLN02259 branched-chain-amino-acid aminotransferase 2 Back     alignment and domain information
>PLN02883 Branched-chain amino acid aminotransferase Back     alignment and domain information
>PLN03117 Branched-chain-amino-acid aminotransferase; Provisional Back     alignment and domain information
>PRK13357 branched-chain amino acid aminotransferase; Provisional Back     alignment and domain information
>KOG0975 consensus Branched chain aminotransferase BCAT1, pyridoxal phosphate enzymes type IV superfamily [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR01123 ilvE_II branched-chain amino acid aminotransferase, group II Back     alignment and domain information
>TIGR01122 ilvE_I branched-chain amino acid aminotransferase, group I Back     alignment and domain information
>PRK06606 branched-chain amino acid aminotransferase; Validated Back     alignment and domain information
>PRK12479 branched-chain amino acid aminotransferase; Provisional Back     alignment and domain information
>PRK13356 aminotransferase; Provisional Back     alignment and domain information
>PRK07544 branched-chain amino acid aminotransferase; Validated Back     alignment and domain information
>PRK08320 branched-chain amino acid aminotransferase; Reviewed Back     alignment and domain information
>cd01557 BCAT_beta_family BCAT_beta_family: Branched-chain aminotransferase catalyses the transamination of the branched-chain amino acids leusine, isoleucine and valine to their respective alpha-keto acids, alpha-ketoisocaproate, alpha-keto-beta-methylvalerate and alpha-ketoisovalerate Back     alignment and domain information
>PRK07650 4-amino-4-deoxychorismate lyase; Provisional Back     alignment and domain information
>PLN02845 Branched-chain-amino-acid aminotransferase-like protein Back     alignment and domain information
>PRK06680 D-amino acid aminotransferase; Reviewed Back     alignment and domain information
>PRK12400 D-amino acid aminotransferase; Reviewed Back     alignment and domain information
>cd01558 D-AAT_like D-Alanine aminotransferase (D-AAT_like): D-amino acid aminotransferase catalyzes transamination between D-amino acids and their respective alpha-keto acids Back     alignment and domain information
>TIGR01121 D_amino_aminoT D-amino acid aminotransferase Back     alignment and domain information
>PRK07849 4-amino-4-deoxychorismate lyase; Provisional Back     alignment and domain information
>COG0115 IlvE Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>PRK06092 4-amino-4-deoxychorismate lyase; Reviewed Back     alignment and domain information
>TIGR03461 pabC_Proteo aminodeoxychorismate lyase Back     alignment and domain information
>cd00449 PLPDE_IV PyridoxaL 5'-Phosphate Dependent Enzymes class IV (PLPDE_IV) Back     alignment and domain information
>cd01559 ADCL_like ADCL_like: 4-Amino-4-deoxychorismate lyase: is a member of the fold-type IV of PLP dependent enzymes that converts 4-amino-4-deoxychorismate (ADC) to p-aminobenzoate and pyruvate Back     alignment and domain information
>PRK09266 hypothetical protein; Provisional Back     alignment and domain information
>PF01063 Aminotran_4: Aminotransferase class IV; InterPro: IPR001544 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue Back     alignment and domain information
>PRK07546 hypothetical protein; Provisional Back     alignment and domain information
>PRK07101 hypothetical protein; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query337
4dqn_A345 Crystal Structure Of The Branched-Chain Aminotransf 2e-60
3uyy_A358 Crystal Structures Of Branched-Chain Aminotransfera 8e-58
3jz6_A373 Crystal Structure Of Mycobacterium Smegmatis Branch 5e-57
3dtf_A372 Structural Analysis Of Mycobacterial Branched Chain 6e-57
3ht5_A368 Crystal Structure Of Ilve A Branched Chain Amino Ac 2e-54
2hdk_A365 Crystal Structure Of Cys315ala-Cys318ala Mutant Of 2e-40
2hgw_A365 Crystal Structure Of Cys318ala Mutant Of Human Mito 2e-40
1ekf_A365 Crystallographic Structure Of Human Branched Chain 2e-40
2hg8_A365 Crystal Structure Of Cys315ala Mutant Of Human Mito 2e-40
2hhf_B365 X-ray Crystal Structure Of Oxidized Human Mitochond 5e-39
2hhf_A365 X-ray Crystal Structure Of Oxidized Human Mitochond 4e-38
2cog_A386 Crystal Structure Of Oxidized Human Cytosolic Branc 3e-37
2abj_A366 Crystal Structure Of Human Branched Chain Amino Aci 5e-37
1a3g_A308 Branched-chain Amino Acid Aminotransferase From Esc 1e-27
1i1k_A309 Crystal Structure Of Eschelichia Coli Branched-chai 1e-27
3u0g_A328 Crystal Structure Of Branched-Chain Amino Acid Amin 1e-20
1wrv_A308 Crystal Structure Of T.Th.Hb8 Branched-Chain Amino 7e-20
3csw_A285 Crystal Structure Of A Putative Branched-Chain Amin 2e-11
3lqs_A280 Complex Structure Of D-Amino Acid Aminotransferase 7e-09
1daa_A282 Crystallographic Structure Of D-Amino Acid Aminotra 8e-09
3daa_A277 Crystallographic Structure Of D-Amino Acid Aminotra 9e-09
3sno_A315 Crystal Structure Of A Hypothetical Aminotransferas 1e-08
5daa_A277 E177k Mutant Of D-Amino Acid Aminotransferase Compl 3e-08
1g2w_A282 E177s Mutant Of The Pyridoxal-5'-phosphate Enzyme D 3e-08
1a0g_A282 L201a Mutant Of D-Amino Acid Aminotransferase Compl 4e-08
3lul_A272 Crystal Structure Of Putative 4-Amino-4-Deoxychoris 2e-07
>pdb|4DQN|A Chain A, Crystal Structure Of The Branched-Chain Aminotransferase From Streptococcus Mutans Length = 345 Back     alignment and structure 
Iteration: 1

 Score =  229 bits (583), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 131/339 (38%), Positives = 193/339 (56%), Gaps = 10/339 (2%)
Query: 7   NVNWDGLGFGLTPTDYMYIMNCSKGQKFSQGTLTRFGKTEMNPSSGILNYGQGLIEGLKA 66
           +++W  LGF      + YI     G K+  G LT      ++ SS  L+YGQ   EGLKA
Sbjct: 8   DLDWKNLGFEYHKLPFRYISYYKDG-KWDDGKLTEDATLHISESSPALHYGQEAFEGLKA 66
Query: 67  YRTRNERILLFRPEENAMRMQMGAERMCMSSPTIEQFVNAVKQIVHSNRRWVPPPGKG-T 125
           YRT++  + LFRP  NA R+Q  A+R+ M     ++F++A KQ+V +N  +VPP G G T
Sbjct: 67  YRTKDGSVQLFRPNMNAERLQRTADRLLMPQVPTDKFIDAAKQVVRANEEYVPPYGTGAT 126
Query: 126 MYIRPLLMGNGPDLGVAPASEYTFVTYASPVGNYHKGAL---NLVVEEKFRRATPGGTGG 182
           +Y+RPLL+G G  +GV PA EY F  +A PVGNY KG L   N ++++ + RA P GTG 
Sbjct: 127 LYLRPLLIGVGDVIGVHPADEYIFTIFAMPVGNYFKGGLAPTNFLIQDDYDRAAPHGTGA 186
Query: 183 VKAITNYAIIYKPISEAKAKGFTDVLFLDAVTGKYVEEASTSNIF-VVKENVISTPPTNG 241
            K   NYA    P   A  + F+DV++LD  T   +EE  ++N F + K+N   T P + 
Sbjct: 187 AKVGGNYAASLLPGKVAHERQFSDVIYLDPATHTKIEEVGSANFFGITKDNEFIT-PLSP 245
Query: 242 TILPGITRKSIIEIA-RVLGYQVEERAILVEELFDAEEVFCTGTAVVVNPVNSITYQDKR 300
           +ILP +T+ S++ +A    G +  E  + V+EL    E    GTA V++P+  + + D  
Sbjct: 246 SILPSVTKYSLLYLAEHRFGMKAIEGDVCVDELDKFVEAGACGTAAVISPIGGVQHGDDF 305
Query: 301 TEY--KRGVGTVGQKLYEILTGIQSGCIEDEMGWTVELD 337
             +  +  VG V  KLY+ LTGIQ G ++   GW  ++D
Sbjct: 306 HVFYSETEVGPVTHKLYDELTGIQFGDVKAPEGWIYKVD 344
>pdb|3UYY|A Chain A, Crystal Structures Of Branched-Chain Aminotransferase From Deinococcus Radiodurans Complexes With Alpha-Ketoisocaproate And L-Glutamate Suggest Its Radio-Resistance For Catalysis Length = 358 Back     alignment and structure
>pdb|3JZ6|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Branched Chain Aminotransferase In Complex With Pyridoxal-5'-Phosphate At 1.9 Angstrom. Length = 373 Back     alignment and structure
>pdb|3DTF|A Chain A, Structural Analysis Of Mycobacterial Branched Chain Aminotransferase- Implications For Inhibitor Design Length = 372 Back     alignment and structure
>pdb|3HT5|A Chain A, Crystal Structure Of Ilve A Branched Chain Amino Acid Transaminase From Mycobacterium Tuberculosis Length = 368 Back     alignment and structure
>pdb|2HDK|A Chain A, Crystal Structure Of Cys315ala-Cys318ala Mutant Of Human Mitochondrial Branched Chain Aminotransferase Length = 365 Back     alignment and structure
>pdb|2HGW|A Chain A, Crystal Structure Of Cys318ala Mutant Of Human Mitochondrial Branched Chain Aminotransferase Length = 365 Back     alignment and structure
>pdb|1EKF|A Chain A, Crystallographic Structure Of Human Branched Chain Amino Acid Aminotransferase (Mitochondrial) Complexed With Pyridoxal-5'- Phosphate At 1.95 Angstroms (Orthorhombic Form) Length = 365 Back     alignment and structure
>pdb|2HG8|A Chain A, Crystal Structure Of Cys315ala Mutant Of Human Mitochondrial Branched Chain Aminotransferase Complexed With Its Substrate Mimic, N-Methyl Leucine. Length = 365 Back     alignment and structure
>pdb|2HHF|B Chain B, X-ray Crystal Structure Of Oxidized Human Mitochondrial Branched Chain Aminotransferase (hbcatm) Length = 365 Back     alignment and structure
>pdb|2HHF|A Chain A, X-ray Crystal Structure Of Oxidized Human Mitochondrial Branched Chain Aminotransferase (hbcatm) Length = 365 Back     alignment and structure
>pdb|2COG|A Chain A, Crystal Structure Of Oxidized Human Cytosolic Branched-Chain Aminotransferase Complexed With 4-Methylvalerate Length = 386 Back     alignment and structure
>pdb|2ABJ|A Chain A, Crystal Structure Of Human Branched Chain Amino Acid Transaminase In A Complex With An Inhibitor, C16h10n2o4f3scl, And Pyridoxal 5' Phosphate. Length = 366 Back     alignment and structure
>pdb|1A3G|A Chain A, Branched-chain Amino Acid Aminotransferase From Escherichia Coli Length = 308 Back     alignment and structure
>pdb|1I1K|A Chain A, Crystal Structure Of Eschelichia Coli Branched-chain Amino Acid Aminotransferase. Length = 309 Back     alignment and structure
>pdb|3U0G|A Chain A, Crystal Structure Of Branched-Chain Amino Acid Aminotransferase From Burkholderia Pseudomallei Length = 328 Back     alignment and structure
>pdb|1WRV|A Chain A, Crystal Structure Of T.Th.Hb8 Branched-Chain Amino Acid Aminotransferase Length = 308 Back     alignment and structure
>pdb|3CSW|A Chain A, Crystal Structure Of A Putative Branched-Chain Amino Acid Aminotransferase (Tm0831) From Thermotoga Maritima At 2.15 A Resolution Length = 285 Back     alignment and structure
>pdb|3LQS|A Chain A, Complex Structure Of D-Amino Acid Aminotransferase And 4-Amino-4,5- Dihydro-Thiophenecarboxylic Acid (Adta) Length = 280 Back     alignment and structure
>pdb|1DAA|A Chain A, Crystallographic Structure Of D-Amino Acid Aminotransferase Complexed With Pyridoxal-5'-Phosphate Length = 282 Back     alignment and structure
>pdb|3DAA|A Chain A, Crystallographic Structure Of D-Amino Acid Aminotransferase Inactivated By Pyridoxyl-D-Alanine Length = 277 Back     alignment and structure
>pdb|3SNO|A Chain A, Crystal Structure Of A Hypothetical Aminotransferase (Ncgl2491) From Corynebacterium Glutamicum Atcc 13032 Kitasato At 1.60 A Resolution Length = 315 Back     alignment and structure
>pdb|5DAA|A Chain A, E177k Mutant Of D-Amino Acid Aminotransferase Complexed With Pyridoxamine-5'-Phosphate Length = 277 Back     alignment and structure
>pdb|1G2W|A Chain A, E177s Mutant Of The Pyridoxal-5'-phosphate Enzyme D-amino Acid Aminotransferase Length = 282 Back     alignment and structure
>pdb|1A0G|A Chain A, L201a Mutant Of D-Amino Acid Aminotransferase Complexed With Pyridoxamine-5'-Phosphate Length = 282 Back     alignment and structure
>pdb|3LUL|A Chain A, Crystal Structure Of Putative 4-Amino-4-Deoxychorismate Lyase. (Yp_094631.1) From Legionella Pneumophila Subsp. Pneumophila Str. Philadelphia 1 At 1.78 A Resolution Length = 272 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query337
3dth_A372 Branched-chain amino acid aminotransferase; open t 1e-155
2coi_A386 Branched chain aminotransferase 1, cytosolic; PLP- 1e-145
2a1h_A365 Branched chain aminotransferase; fold type IV; HET 1e-144
1iye_A309 Branched-chain amino acid aminotransferase; hexame 2e-54
3u0g_A328 Putative branched-chain amino acid aminotransfera; 2e-53
2eiy_A308 ILVE, branched-chain amino acid aminotransferase; 3e-53
3csw_A285 BCAT, putative branched-chain-amino-acid aminotran 8e-50
3lul_A272 4-amino-4-deoxychorismate lyase; structural genomi 4e-49
3sno_A315 Hypothetical aminotransferase; D-aminoacid aminotr 2e-47
2zgi_A246 Putative 4-amino-4-deoxychorismate lyase; TTHA0621 2e-44
1i2k_A269 4-amino-4-deoxychorismate lyase; pyridoxal phospha 2e-43
2xpf_A292 4-amino-4-deoxychorismate lyase; para-aminobenzoic 2e-41
3daa_A277 D-amino acid aminotransferase; pyridoxal phosphate 6e-40
3qqm_A221 MLR3007 protein; structural genomics, joint center 3e-28
3ceb_A194 D-aminoacid aminotransferase-like PLP-dependent E; 6e-16
>2coi_A Branched chain aminotransferase 1, cytosolic; PLP-dependent enzyme; HET: PLP GBN; 1.90A {Homo sapiens} PDB: 2cog_A* 2coj_A* 2abj_A* Length = 386 Back     alignment and structure
>2a1h_A Branched chain aminotransferase; fold type IV; HET: PLP GBN; 1.80A {Homo sapiens} SCOP: e.17.1.1 PDB: 1ekp_A* 1ekv_A* 1ekf_A* 1kta_A* 1kt8_A* 2hhf_B* 2hhf_A* 2hgw_A* 2hg8_A* 2hgx_A* 2hdk_A* Length = 365 Back     alignment and structure
>1iye_A Branched-chain amino acid aminotransferase; hexamer, PLP; HET: PGU; 1.82A {Escherichia coli} SCOP: e.17.1.1 PDB: 1i1l_A* 1i1m_A* 1iyd_A* 1i1k_A* 1a3g_A* Length = 309 Back     alignment and structure
>3u0g_A Putative branched-chain amino acid aminotransfera; structural genomics, seattle structural genomics center for infectious disease; 1.90A {Burkholderia pseudomallei} Length = 328 Back     alignment and structure
>2eiy_A ILVE, branched-chain amino acid aminotransferase; PLP-dependent enzyme; HET: PLP; 1.35A {Thermus thermophilus} PDB: 1wrv_A* 2ej0_A* 2ej2_A* 2ej3_A* Length = 308 Back     alignment and structure
>3csw_A BCAT, putative branched-chain-amino-acid aminotransfera; TM0831, putative branched-chain amino acid aminotransferase; HET: PLP CIT; 2.15A {Thermotoga maritima MSB8} Length = 285 Back     alignment and structure
>3lul_A 4-amino-4-deoxychorismate lyase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, pyridoxal phosphate; HET: MSE LLP; 1.78A {Legionella pneumophila} Length = 272 Back     alignment and structure
>3sno_A Hypothetical aminotransferase; D-aminoacid aminotransferase-like PLP-dependent enzymes, STR genomics; HET: MSE; 1.60A {Corynebacterium glutamicum} Length = 315 Back     alignment and structure
>2zgi_A Putative 4-amino-4-deoxychorismate lyase; TTHA0621, PLP cofactor, pyridoxal enzyme, structural NPPSFA; HET: PLP PGE; 1.93A {Thermus thermophilus} Length = 246 Back     alignment and structure
>1i2k_A 4-amino-4-deoxychorismate lyase; pyridoxal phosphate, PABC; HET: PLP; 1.79A {Escherichia coli} SCOP: e.17.1.1 PDB: 1et0_A* 1i2l_A* Length = 269 Back     alignment and structure
>3daa_A D-amino acid aminotransferase; pyridoxal phosphate, transaminase; HET: PDD; 1.90A {Bacillus SP} SCOP: e.17.1.1 PDB: 4daa_A* 3lqs_A* 1daa_A* 2daa_A* 5daa_A* 1g2w_A* 1a0g_A* 2dab_A* Length = 277 Back     alignment and structure
>3qqm_A MLR3007 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, transferase; HET: LLP; 2.30A {Mesorhizobium loti} Length = 221 Back     alignment and structure
>3ceb_A D-aminoacid aminotransferase-like PLP-dependent E; joint center for structural genomics, protein structure initiative, PSI-2, lyase; HET: LLP; 2.40A {Haemophilus somnus} Length = 194 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query337
3dth_A372 Branched-chain amino acid aminotransferase; open t 100.0
4dqn_A345 Putative branched-chain amino acid aminotransfera; 100.0
3dtg_A372 Branched-chain amino acid aminotransferase; open t 100.0
3uzo_A358 Branched-chain-amino-acid aminotransferase; BCAT, 100.0
2coi_A386 Branched chain aminotransferase 1, cytosolic; PLP- 100.0
2a1h_A365 Branched chain aminotransferase; fold type IV; HET 100.0
3u0g_A328 Putative branched-chain amino acid aminotransfera; 100.0
2eiy_A308 ILVE, branched-chain amino acid aminotransferase; 100.0
1iye_A309 Branched-chain amino acid aminotransferase; hexame 100.0
3daa_A277 D-amino acid aminotransferase; pyridoxal phosphate 100.0
1i2k_A269 4-amino-4-deoxychorismate lyase; pyridoxal phospha 100.0
3lul_A272 4-amino-4-deoxychorismate lyase; structural genomi 100.0
2xpf_A292 4-amino-4-deoxychorismate lyase; para-aminobenzoic 100.0
3sno_A315 Hypothetical aminotransferase; D-aminoacid aminotr 100.0
3csw_A285 BCAT, putative branched-chain-amino-acid aminotran 100.0
2zgi_A246 Putative 4-amino-4-deoxychorismate lyase; TTHA0621 100.0
3qqm_A221 MLR3007 protein; structural genomics, joint center 100.0
3ceb_A194 D-aminoacid aminotransferase-like PLP-dependent E; 100.0
>4dqn_A Putative branched-chain amino acid aminotransfera; aminotransferase, transferase; 1.97A {Streptococcus mutans} Back     alignment and structure
>3dtg_A Branched-chain amino acid aminotransferase; open twisted alpha/beta; HET: PLP; 1.90A {Mycobacterium smegmatis} PDB: 3dtf_A* 3jz6_A* 3ht5_A* Back     alignment and structure
>3uzo_A Branched-chain-amino-acid aminotransferase; BCAT, amino-acid biosynthesis, branched-CH acid biosynthesis, pyridoxal phosphate, L-GLUT; HET: PLP GLU; 2.00A {Deinococcus radiodurans} PDB: 3uzb_A* 3uyy_A* Back     alignment and structure
>2coi_A Branched chain aminotransferase 1, cytosolic; PLP-dependent enzyme; HET: PLP GBN; 1.90A {Homo sapiens} PDB: 2cog_A* 2coj_A* 2abj_A* Back     alignment and structure
>2a1h_A Branched chain aminotransferase; fold type IV; HET: PLP GBN; 1.80A {Homo sapiens} SCOP: e.17.1.1 PDB: 1ekp_A* 1ekv_A* 1ekf_A* 1kta_A* 1kt8_A* 2hhf_B* 2hhf_A* 2hgw_A* 2hg8_A* 2hgx_A* 2hdk_A* Back     alignment and structure
>3u0g_A Putative branched-chain amino acid aminotransfera; structural genomics, seattle structural genomics center for infectious disease; 1.90A {Burkholderia pseudomallei} Back     alignment and structure
>2eiy_A ILVE, branched-chain amino acid aminotransferase; PLP-dependent enzyme; HET: PLP; 1.35A {Thermus thermophilus} PDB: 1wrv_A* 2ej0_A* 2ej2_A* 2ej3_A* Back     alignment and structure
>1iye_A Branched-chain amino acid aminotransferase; hexamer, PLP; HET: PGU; 1.82A {Escherichia coli} SCOP: e.17.1.1 PDB: 1i1l_A* 1i1m_A* 1iyd_A* 1i1k_A* 1a3g_A* Back     alignment and structure
>3daa_A D-amino acid aminotransferase; pyridoxal phosphate, transaminase; HET: PDD; 1.90A {Bacillus SP} SCOP: e.17.1.1 PDB: 4daa_A* 3lqs_A* 1daa_A* 2daa_A* 5daa_A* 1g2w_A* 1a0g_A* 2dab_A* Back     alignment and structure
>1i2k_A 4-amino-4-deoxychorismate lyase; pyridoxal phosphate, PABC; HET: PLP; 1.79A {Escherichia coli} SCOP: e.17.1.1 PDB: 1et0_A* 1i2l_A* Back     alignment and structure
>3lul_A 4-amino-4-deoxychorismate lyase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, pyridoxal phosphate; HET: MSE LLP; 1.78A {Legionella pneumophila} Back     alignment and structure
>3sno_A Hypothetical aminotransferase; D-aminoacid aminotransferase-like PLP-dependent enzymes, STR genomics; HET: MSE; 1.60A {Corynebacterium glutamicum} Back     alignment and structure
>3csw_A BCAT, putative branched-chain-amino-acid aminotransfera; TM0831, putative branched-chain amino acid aminotransferase; HET: PLP CIT; 2.15A {Thermotoga maritima MSB8} Back     alignment and structure
>2zgi_A Putative 4-amino-4-deoxychorismate lyase; TTHA0621, PLP cofactor, pyridoxal enzyme, structural NPPSFA; HET: PLP PGE; 1.93A {Thermus thermophilus} Back     alignment and structure
>3qqm_A MLR3007 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, transferase; HET: LLP; 2.30A {Mesorhizobium loti} Back     alignment and structure
>3ceb_A D-aminoacid aminotransferase-like PLP-dependent E; joint center for structural genomics, protein structure initiative, PSI-2, lyase; HET: LLP; 2.40A {Haemophilus somnus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 337
d2a1ha1363 e.17.1.1 (A:3-365) Branched-chain aminoacid aminot 2e-68
d1iyea_304 e.17.1.1 (A:) Branched-chain aminoacid aminotransf 8e-51
d1daaa_277 e.17.1.1 (A:) D-aminoacid aminotransferase {Bacill 5e-28
d1i2ka_269 e.17.1.1 (A:) Aminodeoxychorismate lyase {Escheric 4e-21
>d2a1ha1 e.17.1.1 (A:3-365) Branched-chain aminoacid aminotransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 363 Back     information, alignment and structure

class: Multi-domain proteins (alpha and beta)
fold: D-aminoacid aminotransferase-like PLP-dependent enzymes
superfamily: D-aminoacid aminotransferase-like PLP-dependent enzymes
family: D-aminoacid aminotransferase-like PLP-dependent enzymes
domain: Branched-chain aminoacid aminotransferase
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

 Score =  216 bits (551), Expect = 2e-68
 Identities = 99/343 (28%), Positives = 164/343 (47%), Gaps = 20/343 (5%)

Query: 10  WDGLGFGLTPTDYMYIMNCSKGQKFSQGTLTRFGKTEMNPSSGILNYGQGLIEGLKAYRT 69
            + L FG T TD+M ++  +    + Q  +  F    ++P+S  L+Y   L EG+KA++ 
Sbjct: 23  GEPLVFGKTFTDHMLMVEWNDK-GWGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFKG 81

Query: 70  RNERILLFRPEENAMRMQMGAERMCMSSPTIEQFVNAVKQIVHSNRRWVPPPGKGTMYIR 129
           +++++ LFRP  N  RM   A R+C+ S    + +  +++++  ++ WVP     ++Y+R
Sbjct: 82  KDQQVRLFRPWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVR 141

Query: 130 PLLMGNGPDLGVAPASEYTFVTYASPVGNYHK----GALNLVVEEKFRRATPGGTGGVKA 185
           P+L+GN P LGV+            PVG Y        ++L+ +  F RA  GG G  K 
Sbjct: 142 PVLIGNEPSLGVSQPRRALLFVILCPVGAYFPGGSVTPVSLLADPAFIRAWVGGVGNYKL 201

Query: 186 ITNYAIIYKPISEAKAKGFTDVLFLDAVTGKYVEEASTSNIFVVK----ENVISTPPTNG 241
             NY        EA  +G   VL+L     +  E  + +             + TPP NG
Sbjct: 202 GGNYGPTVLVQQEALKRGCEQVLWLYGPDHQLTEVGTMNIFVYWTHEDGVLELVTPPLNG 261

Query: 242 TILPGITRKSIIEIARVLG-YQVEERAILVEELFDA------EEVFCTGTAVVVNPVNSI 294
            ILPG+ R+S++++A+  G ++V ER I +++L  A       EVF +GTA  V PV+ I
Sbjct: 262 VILPGVVRQSLLDMAQTWGEFRVVERTITMKQLLRALEEGRVREVFGSGTACQVCPVHRI 321

Query: 295 TYQDKRTEYKRG--VGTVGQKLYEILTGIQSGCIEDEMGWTVE 335
            Y+D+            +  +  + L  IQ G       W   
Sbjct: 322 LYKDRNLHIPTMENGPELILRFQKELKEIQYG--IRAHEWMFP 362
>d1iyea_ e.17.1.1 (A:) Branched-chain aminoacid aminotransferase {Escherichia coli [TaxId: 562]} Length = 304 Back     information, alignment and structure
>d1daaa_ e.17.1.1 (A:) D-aminoacid aminotransferase {Bacillus sp., strain YM-1 [TaxId: 1409]} Length = 277 Back     information, alignment and structure
>d1i2ka_ e.17.1.1 (A:) Aminodeoxychorismate lyase {Escherichia coli [TaxId: 562]} Length = 269 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query337
d2a1ha1363 Branched-chain aminoacid aminotransferase {Human ( 100.0
d1iyea_304 Branched-chain aminoacid aminotransferase {Escheri 100.0
d1daaa_277 D-aminoacid aminotransferase {Bacillus sp., strain 100.0
d1i2ka_269 Aminodeoxychorismate lyase {Escherichia coli [TaxI 100.0
>d2a1ha1 e.17.1.1 (A:3-365) Branched-chain aminoacid aminotransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Back     information, alignment and structure
class: Multi-domain proteins (alpha and beta)
fold: D-aminoacid aminotransferase-like PLP-dependent enzymes
superfamily: D-aminoacid aminotransferase-like PLP-dependent enzymes
family: D-aminoacid aminotransferase-like PLP-dependent enzymes
domain: Branched-chain aminoacid aminotransferase
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=100.00  E-value=7.2e-70  Score=521.21  Aligned_cols=325  Identities=32%  Similarity=0.557  Sum_probs=290.5

Q ss_pred             CCCCCCCCCCccCCceEEEEeCCCCeeeCCeeeeCCCcccCcCCccccccceeeeeeEEEeecCCeeeecChhhHHHHHH
Q 047617            8 VNWDGLGFGLTPTDYMYIMNCSKGQKFSQGTLTRFGKTEMNPSSGILNYGQGLIEGLKAYRTRNERILLFRPEENAMRMQ   87 (337)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ng~~~~~~~~~i~~~d~~l~yG~gvFEt~r~~~~~~G~~~~f~l~~Hl~RL~   87 (337)
                      .+.+.|+||.++||||+.++|.. ..|.||+++|.+++.||+.|++||||||||||||+|++++|++++|+|++|++||.
T Consensus        21 ~~~~~~~f~~~~~d~m~~~~~~~-~~W~ng~ivp~~~~~isp~~~~l~YG~gvFEgiR~y~~~~g~i~lFrld~Hl~RL~   99 (363)
T d2a1ha1          21 GPGEPLVFGKTFTDHMLMVEWND-KGWGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFKGKDQQVRLFRPWLNMDRML   99 (363)
T ss_dssp             CTTSCCCTTCSCCSEEEEEEEET-TEECCCEEEESCCEEECTTBHHHHSCCEEECCEEEEECTTSCEEEESHHHHHHHHH
T ss_pred             CCcccCCCCCcccceEEEEEecC-CeeeCCEEeEcccceeCcchhhccccceeeeeEEEEECCCCCEEEEccHHHHHHHH
Confidence            45688999999999999999995 58999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCCHHHHHHHHHHHHHHcCCCCCCCCcceEEEEEEEEecCCCCCcCCCCCcEEEEEEeecCCccC----Cc
Q 047617           88 MGAERMCMSSPTIEQFVNAVKQIVHSNRRWVPPPGKGTMYIRPLLMGNGPDLGVAPASEYTFVTYASPVGNYHK----GA  163 (337)
Q Consensus        88 ~Sa~~l~i~~~~~~~l~~~i~~ll~~~~~~~p~~~~~~~~iR~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~----~~  163 (337)
                      +||+++.++.++.+++.++|.++++.|..++|....+.+|||+++++++...++.++.....++.+.|...++.    ++
T Consensus       100 ~Sa~~l~~~~~~~~~~~~~i~~~v~~n~~~v~~~~~~~~yiR~~v~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~  179 (363)
T d2a1ha1         100 RSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSLGVSQPRRALLFVILCPVGAYFPGGSVTP  179 (363)
T ss_dssp             HHHHHTTCCCCCHHHHHHHHHHHHHHTGGGSCCSTTCEEEEEEEEEECCBCCSCSCCSEEEEEEEEEEECCSSSSSSCCC
T ss_pred             HHHHHhCCCCCChHHHHHHHHHHHHHHHhhccccccccEEEEEeeccCCccccccCCcccceeEEEeeccccCccccccc
Confidence            99999999977899999999999999998988876679999999988776777777665556666666554432    46


Q ss_pred             eEEEEEeeceecCCCCCCCCccccchhhhHHHHHHHHHCCCCeEEEEecCCCCeEEecCceeEEEEECC-----EEEeCC
Q 047617          164 LNLVVEEKFRRATPGGTGGVKAITNYAIIYKPISEAKAKGFTDVLFLDAVTGKYVEEASTSNIFVVKEN-----VISTPP  238 (337)
Q Consensus       164 ~~l~~~~~~~r~~~~~~~~~Kt~~~y~~~~~a~~~A~~~g~de~Llln~~~~g~v~E~s~sNvf~v~~~-----~l~TP~  238 (337)
                      ..+.+.+.+.|..+......|..+||+++++|.++|+++|+||+||++.+ +|+|+|++++|+|+++++     +++|||
T Consensus       180 ~~~~~~~~~~r~~~~~~~~~k~~~ny~~~~la~~eA~~~G~de~l~L~~~-dg~v~E~~~sNiF~v~~~kdG~~~l~tpp  258 (363)
T d2a1ha1         180 VSLLADPAFIRAWVGGVGNYKLGGNYGPTVLVQQEALKRGCEQVLWLYGP-DHQLTEVGTMNIFVYWTHEDGVLELVTPP  258 (363)
T ss_dssp             EEEEECTTCCSCCTTSSTTSCBGGGTTTHHHHHHHHHHTTCSEEEEEETT-TTEEEEETTEEEEEEEECTTSCEEEEECC
T ss_pred             eeEEEeeeccccCccccccccccccccchhhHHHHhhcCCceeeeecccc-cceEEeccceEEEEEEecCCCcEEEEecc
Confidence            67766666788888888888988899999999999999999999999753 799999999999999766     699999


Q ss_pred             CCCCCCCChHHHHHHHHHHHcC-CcEEEEecCHHHHhcc------ceeeeecCccceEEEEEEEeCCeEEee-CCCccH-
Q 047617          239 TNGTILPGITRKSIIEIARVLG-YQVEERAILVEELFDA------EEVFCTGTAVVVNPVNSITYQDKRTEY-KRGVGT-  309 (337)
Q Consensus       239 l~~giL~GitR~~vl~~a~~~G-i~v~e~~i~~~eL~~a------devfltnt~~gi~pV~~I~~~~~~i~~-~~~~g~-  309 (337)
                      ++.+|||||||+.||++|+++| ++|+|++|+++||.+|      ||||+|||+.+|+||.+|+++++.+.+ ++++|| 
T Consensus       259 l~~~ILpGITR~~Viela~~~g~i~V~Er~i~~~eL~~A~~~~~~dEvF~tgTa~~I~PV~~I~~~~~~~~i~~g~~g~~  338 (363)
T d2a1ha1         259 LNGVILPGVVRQSLLDMAQTWGEFRVVERTITMKQLLRALEEGRVREVFGSGTACQVCPVHRILYKDRNLHIPTMENGPE  338 (363)
T ss_dssp             CSSSSCCCHHHHHHHHHHHHHTSSEEEECCCBHHHHHHHHHTTCEEEEEEEETTTEEEEEEEEEETTEEEECTTGGGTTH
T ss_pred             ccccccCchHHHHHHHHHHHcCCCceeecCCCHHHHHhHhhcCCccEEEEcCCCcEEEEEEEEEeCCceEEeCCCCcCHH
Confidence            9999999999999999999997 9999999999999999      999999999999999999887765443 467775 


Q ss_pred             HHHHHHHHHHhhHccCCCCCCCCeEEC
Q 047617          310 VGQKLYEILTGIQSGCIEDEMGWTVEL  336 (337)
Q Consensus       310 ~~~~L~~~~~~~~~~~~~~~~~w~~~~  336 (337)
                      +|++|+++|.++|+|+.++  +|+++|
T Consensus       339 it~~L~~~l~~iq~G~~~~--~W~~~v  363 (363)
T d2a1ha1         339 LILRFQKELKEIQYGIRAH--EWMFPV  363 (363)
T ss_dssp             HHHHHHHHHHHHHTTSSCC--TTEEEC
T ss_pred             HHHHHHHHHHHHhCCCCCC--CCeeEC
Confidence            9999999999999999877  999987
>d1iyea_ e.17.1.1 (A:) Branched-chain aminoacid aminotransferase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1daaa_ e.17.1.1 (A:) D-aminoacid aminotransferase {Bacillus sp., strain YM-1 [TaxId: 1409]} Back     information, alignment and structure
>d1i2ka_ e.17.1.1 (A:) Aminodeoxychorismate lyase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure