Citrus Sinensis ID: 047792


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910---
MNSSAFQWLRTLLISFFLTAFCLNSFLSSATQISYSDHCNSIVPESTLNKFEPALSSFPRLHTGYYTGGDEILSQNAYSLTFRTPNVYKTEKDGVFGIEGTLLLRSRNTYSSDGGVTYVQVAKSYDPGAISHEPGVRRRRSLVRFRLHGFWSESSGNLCMVGTEDELPNLAAVLKLSNLKNSSVVTTLVSGRLECMSSANDLNYFEPISILIPPRMSYEYSLASKDLSNEFSGGNDTVKCLPLSSLPRTSFCSVVLGGNEFNLKYSSNCSSANICSPFSDSTDGYFPRVVSLKQIECLEEEKRLRVLVEFPNSSYVGYYHPFDPNRTLVAEGYWDDKMNKLFIVACRFLNSAESLANAYIGDCTTRLSLSFPSIWSIRQSRNIVGEIWSKKAVSDSGYFEKIHFQNSENSFRTVSGLKYEYSEINRARELCWPKWKPQKSNGKKYPSEHSYDMQFNIRVHRPNANSSRGYATPLSAGDQFYPRYLYSKTPLSSSTSRPTVQESFNRNSQVNISYKIGIRLLPGATFGGQVYSLDISRSSYSGVEISAEGIYDSKTGQLCMVGCRSIVSNNLSSTSDSMDCEILLNFQFPPSNPKENEDHIKGSIKSMRAESDPLYFEPMEVYSVSYSALAVKKSISKMDWEITVALISNTLACIFVGLQLLHVKKHPEVLPSISLFMLLLLTLGHMIPLMLNFEALFLKNLDRPRVLLSRGGWLEVNEVLVRIITMVAFLLEFRLLQLSWSAKLADGQDQPGLWLAEKRSLFVSFSLYAPGAIIFYLFNWREHNHYLGFLSSPQRFYPQPQRWEGLKLYTVFVLDGFLLPQILFNIFRNSKDNALASSFYIGVTSLRLLPHAYHALHTNADYFSDACNIIVSVGGMMFAAVIFLQQLFGGCCNDRKKFIDGQAYEKVSIVSET
cccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccEEEcccccEEEEEEEEEEEEcccccccccEEEEEEEEccccccccccccccccccEEEEEEccccccccccEEEEccccccccccEEEEEccccccccccccEEEEEEEccccccccccccEEEEEcccccccccccccccccccccccccccccccccccccccccccccccEEEEEEcccccccccccccccccccccccEEEEEEEEEcccccEEEEEEEEEccccccccccccccccEEEEEEEEccccEEEEEEEEEcccccccccccccccccEEEEEEccEEEEEEccEEEEEEEEccccccccccEEEEEEccccccccccccEEEEcHHHHHHHccccccccccccccccccccccccEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEEEEEcccccccccEEEEEEEcccccEEEEEEEEEEEccccEEEEEEEEEcccccccccccccccEEEEEEEccccccccccccEEEEEEEccccccccccccEEEEEEEEEHHHHHccEEEEEEEEEHHHHHHHHHHHHHHHHHEEcccccccccHHHHHHHHHHHHHHHHHHHcccEEEEccccccccEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccEEEEEHHHHHHHHEEEEEEEcccccccccccccccccccccccHHHHcHHHHHHHccccHHHHHHHHHHccccccccccEEEEHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccEEEEEccccc
ccccHHHHHHHHHHHHHHHHHHHcccccccccccHHHcccccccccccccccccccccccccccEEccccHHcccccccEEEEcccEEEcccccEEEEEEEEEEEEcccccccccccccEEEcccccccccccccccccccEEEEEEEEEEEccccEEEEEEcccccccccEEEEEEcccccccccccEEEEEEEcccccccHccccEEEEcccccccEEEEccccHcccccccccccccccccccccccHHHHcccccccccEccccccccccccccccccccccccEEEEEEEEEcccccEEEEEEEEEcccccccccccccccEEEEEEEEcccccEEEEEEEEEEcccccccccccccccEEEEEEEcEEEEEEccEEEEEEEEEccccccccccccEEEcccccccccccccEEEEEEHHHHHHHHHccccccccccccccccccccccEEEEEEccccccccccccccccccHcccccccccccccccccccccccccccccEEEEEEEEEEEcccccEEcccEEEEEEEcccccEEEEEEEEEEcccccEEEEEEEEEEEccccccccccccEEEEEEEEEccccccccccccEEEEEccccccccccccccEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHcccccccEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHcHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEccccccccccEEEEEEEccc
MNSSAFQWLRTLLISFFLTAFCLNsflssatqisysdhcnsivpestlnkfepalssfprlhtgyytggdeilsqnaysltfrtpnvyktekdgvfgieGTLLLRsrntyssdggvtYVQVAKsydpgaishepgvrrRRSLVRFRlhgfwsessgnlcmvgtedelPNLAAVLKlsnlknssVVTTLVSGRLEcmssandlnyfepisilipprmsyeYSLASkdlsnefsggndtvkclplsslprtsfcsvvlggnefnlkyssncssanicspfsdstdgyfprvVSLKQIECLEEEKRLRVLvefpnssyvgyyhpfdpnrtlvaegywddkmNKLFIVACRFLNSAESLANAyigdcttrlslsfpsiwsirqSRNIVGEIwskkavsdsgyfekihfqnsensfrtvsglKYEYSEINRarelcwpkwkpqksngkkypsehsydmqfnirvhrpnanssrgyatplsagdqfyprylysktplssstsrptvqesfnrnsqvnisykigirllpgatfggqvysldisrssysgveisaegiydsktgqlcmvgcrsivsnnlsstsdsmdceillnfqfppsnpkenedhiKGSIKsmraesdplyfepmevYSVSYSALAVKKSISKMDWEITVALISNTLACIFVGLQLlhvkkhpevlpSISLFMLLLLTLGHMIPLMLNFEALFLKnldrprvllsrggwleVNEVLVRIITMVAFLLEFRLLQLSWsakladgqdqpglwlaeKRSLFVsfslyapgAIIFYLFNWREhnhylgflsspqrfypqpqrweglkLYTVFVldgfllpqILFNIFRNSKDNALASSFYIGvtslrllphayhalhtnadyfsdACNIIVSVGGMMFAAVIFLQQLFggccndrkkfidgqayEKVSIVSET
MNSSAFQWLRTLLISFFLTAFCLNSFLSSATQISYSDHCNSIVPESTLNKFEPALSSFPRLHTGYYTGGDEILSQNAYSLTFRTpnvyktekdgvFGIEGTLLLRSRNTYSSDGGVTYVQVAKSydpgaishepgvrrRRSLVRFRLHgfwsessgnlCMVGTEDELPNLAAVLklsnlknssVVTTLVSGRLECMSSANDLNYFEPISILIPPRMSYEYSLASKDLSNEFSGGNDTVKCLPLSSLPRTSFCSVVLGGNEFNLKYSSNCSSANICSPFSDSTDGYFPRVVSLKQIECLEEEKRLRVLVEFPNSSYVGYYHPFDPNRTLVAEGYWDDKMNKLFIVACRFLNSAESLANAYIGDCTTRLSLSFPSIWSIRQSRNIVGEIWSKKAVSDSGYFEKihfqnsensfrtvSGLKYEYSEINRarelcwpkwkpqksngkkypseHSYDMQFNIRVHRPNANSSRGYATPLSAGDQFYPRYLYSKTplssstsrptvqesfnrnsqvnisYKIGIRLLPGATFGGQVYSLDISRSSYSGVEISAEGIYDSKTGQLCMVGCRSIVSNNLSSTSDSMDCEILLNFqfppsnpkenEDHIKGSIKSMRAESDPLYFEPMEVYSVSYSALAVKKSISKMDWEITVALISNTLACIFVGLQLLHVKKHPEVLPSISLFMLLLLTLGHMIPLMLNFEALFLKNLDRPRVLLsrggwlevNEVLVRIITMVAFLLEFRLLQLSWSAKLADGQDQPGLWLAEKRSLFVSFSLYAPGAIIFYLFNWREHNHYLGFLSSPQRFYPQPQRWEGLKLYTVFVLDGFLLPQILFNIFRNSKDNALASSFYIGVTSLRLLPHAYHALHTNADYFSDACNIIVSVGGMMFAAVIFLQQLFGGCCNDRKKFidgqayekvsivset
MNSSAFQWLRTLLISFFLTAFCLNSFLSSATQISYSDHCNSIVPESTLNKFEPALSSFPRLHTGYYTGGDEILSQNAYSLTFRTPNVYKTEKDGVFGIEGTLLLRSRNTYSSDGGVTYVQVAKSYDPGAISHEPGvrrrrslvrfrlHGFWSESSGNLCMVGTEDELPNLAAVLKLSNLKNSSVVTTLVSGRLECMSSANDLNYFEPISILIPPRMSYEYSLASKDLSNEFSGGNDTVKCLPLSSLPRTSFCSVVLGGNEFNLKYSSNCSSANICSPFSDSTDGYFPRVVSLKQIecleeekrlrvlveFPNSSYVGYYHPFDPNRTLVAEGYWDDKMNKLFIVACRFLNSAESLANAYIGDCTTRLSLSFPSIWSIRQSRNIVGEIWSKKAVSDSGYFEKIHFQNSENSFRTVSGLKYEYSEINRARELCWPKWKPQKSNGKKYPSEHSYDMQFNIRVHRPNANSSRGYATPLSAGDQFYPRYLYSKTPLSSSTSRPTVQESFNRNSQVNISYKIGIRLLPGATFGGQVYSLDISRSSYSGVEISAEGIYDSKTGQLCMVGCRSIVSNNLSSTSDSMDCEILLNFQFPPSNPKENEDHIKGSIKSMRAESDPLYFEPMEVYSVSYSALAVKKSISKMDWEITVALISNTLACIFVGLQLLHVKKHPEVlpsislfmlllltlghmiplmlNFEALFLKNLDRPRVLLSRGGWLEVNEVLVRIITMVAFLLEFRLLQLSWSAKLADGQDQPGLWLAEKRSLFVSFSLYAPGAIIFYLFNWREHNHYLGFLSSPQRFYPQPQRWEGLKLYTVFVLDGFLLPQILFNIFRNSKDNALASSFYIGVTSLRLLPHAYHALHTNADYFSDACNIIVSVGGMMFAAVIFLQQLFGGCCNDRKKFIDGQAYEKVSIVSET
*****FQWLRTLLISFFLTAFCLNSFLSSATQISYSDHCNSIVPESTLNKFEPALSSFPRLHTGYYTGGDEILSQNAYSLTFRTPNVYKTEKDGVFGIEGTLLLRSRNTYSSDGGVTYVQVAKSYDPGAISHEPGVRRRRSLVRFRLHGFWSESSGNLCMVGTEDELPNLAAVLKLSNLKNSSVVTTLVSGRLECMSSANDLNYFEPISILIPPRMSYEYSLASKDLSNEFSGGNDTVKCLPLSSLPRTSFCSVVLGGNEFNLKYSSNCSSANICSPFSDSTDGYFPRVVSLKQIECLEEEKRLRVLVEFPNSSYVGYYHPFDPNRTLVAEGYWDDKMNKLFIVACRFLNSAESLANAYIGDCTTRLSLSFPSIWSIRQSRNIVGEIWSKKAVSDSGYFEKIHFQNSENSFRTVSGLKYEYSEINRARELCWPKW******************************************DQFYPRYLY**********************QVNISYKIGIRLLPGATFGGQVYSLDISRSSYSGVEISAEGIYDSKTGQLCMVGCRSIVSNNL******MDCEILLNFQ**************************LYFEPMEVYSVSYSALAVKKSISKMDWEITVALISNTLACIFVGLQLLHVKKHPEVLPSISLFMLLLLTLGHMIPLMLNFEALFLKNLDRPRVLLSRGGWLEVNEVLVRIITMVAFLLEFRLLQLSWSAKLADGQDQPGLWLAEKRSLFVSFSLYAPGAIIFYLFNWREHNHYLGFLSSPQRFYPQPQRWEGLKLYTVFVLDGFLLPQILFNIFRNSKDNALASSFYIGVTSLRLLPHAYHALHTNADYFSDACNIIVSVGGMMFAAVIFLQQLFGGCCNDRKKFIDGQAYEKV******
****AFQ*LRTLLISFFLTAFCLNSFLSSATQISYSDHCN******************PRLHTGYYTGGDEILSQNAYSLTFRTPNVYKTEKDGVFGIEGTLLLRSRN****************************RRRRSLVRFRLHGFWSESSGNLCMVGTEDELPNLAAVLKLSNLKNSSVVTTLVSGRLECMSSANDLNYFEPISILIPPRMSYEYSLAS************************TSFCSVVLGGNEFNLKYS****************DGYFPRVVSLKQIECLEEEKRLRVLVEFPNSSYVGYYHPFDPNRTLVAEGYWDDKMNKLFIVACRFLNSAESLANAYIGDCTTRLSLSFPSIWSIRQSRNIVGEIWS**********************RTVSGLKYEYSEINR***********************SYDMQFNIRVHRPNA*SSRGYATPLSAGDQFYPRYLY***************************YKIGIRLLPGATFGGQVYSLDISRSSYSGVEISAEGIYDSKTGQLCMVGCRSIV**********MDCEILLNFQFPPSN********************PLYFEPMEVYSVSYSALAVKKSISKMDWEITVALISNTLACIFVGLQLLHVKKHPEVLPSISLFMLLLLTLGHMIPLMLNFEALFLKNLDRPRVLLSRGGWLEVNEVLVRIITMVAFLLEFRLLQLS*******************RSLFVSFSLYAPGAIIFYLFNWREHNHYLGFLSSPQRFYPQPQRWEGLKLYTVFVLDGFLLPQILFNIFRNSKDNALASSFYIGVTSLRLLPHAYHALHTNADYFSDACNIIVSVGGMMFAAVIFLQQLFGGCCNDRKKFIDGQAYE*VSI****
MNSSAFQWLRTLLISFFLTAFCLNSFLSSATQISYSDHCNSIVPESTLNKFEPALSSFPRLHTGYYTGGDEILSQNAYSLTFRTPNVYKTEKDGVFGIEGTLLLRSRNTYSSDGGVTYVQVAKSYDPGAISHEPGVRRRRSLVRFRLHGFWSESSGNLCMVGTEDELPNLAAVLKLSNLKNSSVVTTLVSGRLECMSSANDLNYFEPISILIPPRMSYEYSLASKDLSNEFSGGNDTVKCLPLSSLPRTSFCSVVLGGNEFNLKYSSNCSSANICSPFSDSTDGYFPRVVSLKQIECLEEEKRLRVLVEFPNSSYVGYYHPFDPNRTLVAEGYWDDKMNKLFIVACRFLNSAESLANAYIGDCTTRLSLSFPSIWSIRQSRNIVGEIWSKKAVSDSGYFEKIHFQNSENSFRTVSGLKYEYSEINRARELCWPKW***********SEHSYDMQFNIRVHRPNANSSRGYATPLSAGDQFYPRYLYSKT*************SFNRNSQVNISYKIGIRLLPGATFGGQVYSLDISRSSYSGVEISAEGIYDSKTGQLCMVGCRSIVSNNLSSTSDSMDCEILLNFQFPPSNPKENEDHIKGSIKSMRAESDPLYFEPMEVYSVSYSALAVKKSISKMDWEITVALISNTLACIFVGLQLLHVKKHPEVLPSISLFMLLLLTLGHMIPLMLNFEALFLKNLDRPRVLLSRGGWLEVNEVLVRIITMVAFLLEFRLLQLSWSAKLADGQDQPGLWLAEKRSLFVSFSLYAPGAIIFYLFNWREHNHYLGFLSSPQRFYPQPQRWEGLKLYTVFVLDGFLLPQILFNIFRNSKDNALASSFYIGVTSLRLLPHAYHALHTNADYFSDACNIIVSVGGMMFAAVIFLQQLFGGCCNDRKKFIDGQAYEKVSIVSET
***SAFQWLRTLLISFFLTAFCLNSFLSSATQISYSDHCNSIVPESTLNKFEPALSSFPRLHTGYYTGGDEILSQNAYSLTFRTPNVYKTEKDGVFGIEGTLLLRSRNTYSSDGGVTYVQVAKSYDPGAISHEPGVRRRRSLVRFRLHGFWSESSGNLCMVGTEDELPNLAAVLKLSNLKNSSVVTTLVSGRLECMSSANDLNYFEPISILIPPRMSYEYSLASKDLSNEFSGGNDTVKCLPLSSLPRTSFCSVVLGGNEFNLKYSSNCSSANICSPFSDSTDGYFPRVVSLKQIECLEEEKRLRVLVEFPNSSYVGYYHPFDPNRTLVAEGYWDDKMNKLFIVACRFLNSAESLANAYIGDCTTRLSLSFPSIWSIRQSRNIVGEIWSKKAVSDSGYFEKIHFQNSENSFRTVSGLKYEYSEINRARELCWPKWKP****GKKYPSEHSYDMQFNIRVHRPNANSSRGYATPLSAGDQFYPRYLYSKTPLSSSTSRPTVQESFNRNSQVNISYKIGIRLLPGATFGGQVYSLDISRSSYSGVEISAEGIYDSKTGQLCMVGCRSIVSNNLSSTSDSMDCEILLNFQFPPSNPKENEDHIKGSIKSMRAESDPLYFEPMEVYSVSYSALAVKKSISKMDWEITVALISNTLACIFVGLQLLHVKKHPEVLPSISLFMLLLLTLGHMIPLMLNFEALFLKNLDRPRVLLSRGGWLEVNEVLVRIITMVAFLLEFRLLQLSWSAKLAD***QPGLWLAEKRSLFVSFSLYAPGAIIFYLFNWREHNHY****SSPQR**PQPQRWEGLKLYTVFVLDGFLLPQILFNIFRNSKDNALASSFYIGVTSLRLLPHAYHALHTNADYFSDACNIIVSVGGMMFAAVIFLQQLFGGCCNDRKKFIDGQAYEKVSIV***
ooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiii
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iiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiii
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MNSSAFQWLRTLLISFFLTAFCLNSFLSSATQISYSDHCNSIVPESTLNKFEPALSSFPRLHTGYYTGGDEILSQNAYSLTFRTPNVYKTEKDGVFGIEGTLLLRSRNTYSSDGGVTYVQVAKSYDPGAISHEPGVRRRRSLVRFRLHGFWSESSGNLCMVGTEDELPNLAAVLKLSNLKNSSVVTTLVSGRLECMSSANDLNYFEPISILIPPRMSYEYSLASKDLSNEFSGGNDTVKCLPLSSLPRTSFCSVVLGGNEFNLKYSSNCSSANICSPFSDSTDGYFPRVVSLKQIECLEEEKRLRVLVEFPNSSYVGYYHPFDPNRTLVAEGYWDDKMNKLFIVACRFLNSAESLANAYIGDCTTRLSLSFPSIWSIRQSRNIVGEIWSKKAVSDSGYFEKIHFQNSENSFRTVSGLKYEYSEINRARELCWPKWKPQKSNGKKYPSEHSYDMQFNIRVHRPNANSSRGYATPLSAGDQFYPRYLYSKTPLSSSTSRPTVQESFNRNSQVNISYKIGIRLLPGATFGGQVYSLDISRSSYSGVEISAEGIYDSKTGQLCMVGCRSIVSNNLSSTSDSMDCEILLNFQFPPSNPKENEDHIKGSIKSMRAESDPLYFEPMEVYSVSYSALAVKKSISKMDWEITVALISNTLACIFVGLQLLHVKKHPEVLPSISLFMLLLLTLGHMIPLMLNFEALFLKNLDRPRVLLSRGGWLEVNEVLVRIITMVAFLLEFRLLQLSWSAKLADGQDQPGLWLAEKRSLFVSFSLYAPGAIIFYLFNWREHNHYLGFLSSPQRFYPQPQRWEGLKLYTVFVLDGFLLPQILFNIFRNSKDNALASSFYIGVTSLRLLPHAYHALHTNADYFSDACNIIVSVGGMMFAAVIFLQQLFGGCCNDRKKFIDGQAYEKVSIVSET
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query913
359493665932 PREDICTED: uncharacterized protein LOC10 0.952 0.933 0.465 0.0
225461435916 PREDICTED: uncharacterized protein LOC10 0.949 0.946 0.451 0.0
359493663946 PREDICTED: uncharacterized protein LOC10 0.936 0.903 0.451 0.0
147822078 1269 hypothetical protein VITISV_027858 [Viti 0.937 0.674 0.448 0.0
302143012 1709 unnamed protein product [Vitis vinifera] 0.927 0.495 0.445 0.0
359493667981 PREDICTED: uncharacterized protein LOC10 0.949 0.883 0.428 0.0
224126567935 predicted protein [Populus trichocarpa] 0.935 0.913 0.422 0.0
255581823856 conserved hypothetical protein [Ricinus 0.884 0.943 0.427 1e-177
255575730934 conserved hypothetical protein [Ricinus 0.948 0.927 0.397 1e-170
224125506949 predicted protein [Populus trichocarpa] 0.909 0.874 0.409 1e-165
>gi|359493665|ref|XP_002282376.2| PREDICTED: uncharacterized protein LOC100250261 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  749 bits (1934), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 441/947 (46%), Positives = 583/947 (61%), Gaps = 77/947 (8%)

Query: 8   WLRTLLISFFLTAFCLNSFLSSATQISYSDHCNSIVPESTLNKFEPALSSFPRLHTGYYT 67
           WL   L     T F   S  SS TQ+SY DHC SIVPES   + E   S F     GY+T
Sbjct: 19  WLHAFLFLVLSTVFSATSVSSSPTQLSYGDHCASIVPESRPTRPEFTTSRFTGFKVGYFT 78

Query: 68  GGDEILSQNAYSLT--------FRTPNVYKTEKDGVFGIEGTLLLRSRNTYSSDGGVTYV 119
           GG  IL QN+   +        FRT ++Y TE +GVF +EG L+L S   Y         
Sbjct: 79  GGTAILGQNSSPYSSQSSKSLSFRTRSLYATETEGVFKVEGRLVLASDRMY--------- 129

Query: 120 QVAKSYDPGAISHEPGVRRRRSLVRFRLHGFWSESSGNLCMVGTEDELPN------LAAV 173
                Y  G +SH      R S  +  L GFWSESSG LCMVG      N      L+AV
Sbjct: 130 -----YFEGDLSHG-----RPSFPQ--LQGFWSESSGELCMVGLGSAYSNGGNLLRLSAV 177

Query: 174 LKLSNLKNSSVVTTLVSGRLECMSSANDLNYFEPISILIPPRMSYEYSLASKDLSNEFSG 233
           LKLSN+KNSS +T LV+G L+ ++SA+D NYFEPISILI P M+Y+Y+LAS        G
Sbjct: 178 LKLSNVKNSSTITDLVTGTLKSLNSAHDSNYFEPISILIFPEMNYKYTLASS--GTGCPG 235

Query: 234 GNDTVKCLPLSSLPRTSFCSVVLGGNEFNLKYSSNCSSANICSPFSDSTDGYFPRVVSLK 293
           G D  +   LS+    S CS+ L    F L+Y+ +C+ +  CSPF     GY P+ +S+ 
Sbjct: 236 GADVPETASLSTDSMNSICSI-LSMERFGLEYAHDCNPSQNCSPFGGGI-GYLPQFISIT 293

Query: 294 QIECLEEEKRLRVLVEFPNSSYVGYYHPFDPNRTLVAEGYWDDKMNKLFIVACRFLNSAE 353
           + +C E+E+RL+V+V+F NSSY  YY  ++P+ TL+ EG WD   N+L +VACR LN  +
Sbjct: 294 EFQCSEDEERLQVMVKFQNSSY-DYYRTYNPSTTLIGEGSWDVNKNQLCLVACRILNEGD 352

Query: 354 SLANAYIGDCTTRLSLSFPSIWSIRQSRNIVGEIWSKKAVSDSGYFEKIHFQNSENSFRT 413
           SL +A IGDC+ +LSL FP+I SIR    +VG+IWS K V+D G+F KI FQ+  N    
Sbjct: 353 SLVDARIGDCSIKLSLRFPAILSIRNRSTVVGQIWSDKTVNDPGFFSKIMFQSIRNRMPG 412

Query: 414 VSGLKYEYSEINRARELCWPKWKPQKSNGKKYPSEHSYDMQFNIRVHRPNANSSRGYATP 473
           + G KYEY+EI RAR+LC  K KP +  G  YP+ +S DMQ ++ V          Y+  
Sbjct: 413 IPGSKYEYTEIERARKLCLKK-KPAEKKGVAYPNGYSSDMQLDMSVRNSTHLMGWAYSEL 471

Query: 474 LSAGDQFYPRYLYSKTPLSSST------SRPTVQESFNRNSQ----VNISYKIGIRLLPG 523
           ++ GD+FY RY  S   L  S+      S  T + SF  N+     +N+SY+I + L PG
Sbjct: 472 ITLGDRFYDRYAQSIVSLEESSVAVATSSASTPENSFETNASDSRPMNVSYRISLTLEPG 531

Query: 524 ATFGGQVYSLDISRSSYSGVEISAEGIYDSKTGQLCMVGCRSIVSNNLSSTSDSMDCEIL 583
             FG  + S       Y+ VEISAEGIYD+KTG LCMVGCR + S   +S++DSMDCEIL
Sbjct: 532 VKFGDMIISPSNFSGIYTPVEISAEGIYDAKTGFLCMVGCRKLSSPVKTSSNDSMDCEIL 591

Query: 584 LNFQFPPSNPKENEDHIKGSIKSMRAESDPLYFEPMEVYSVSYSALAVKKSISKMDWEIT 643
           +N QFP  N K N  +IKGSI+S R +SDPLYFE +++ + S+     ++SI +MD+EI 
Sbjct: 592 VNLQFPQLNSK-NRGYIKGSIQSTREKSDPLYFEHLDLSANSF--FGARQSIWRMDFEII 648

Query: 644 VALISNTLACIFVGLQLLHVKKHPEVLPSISLFMLLLLTLGHMIPLMLNFEALFLKNLDR 703
           + LIS+TL+C+FVGLQL +VKKH EVLPSISL ML++LTLG+MIPL+LNFEALFL + D+
Sbjct: 649 MVLISHTLSCVFVGLQLFYVKKHSEVLPSISLVMLVVLTLGYMIPLVLNFEALFLGSHDQ 708

Query: 704 PRVLLSRGGWLEVNEVLVRIITMVAFLLEFRLLQLSWSAKLADGQDQPGLWLAEKRSLFV 763
              LL  GGW++ NEV+VRI+TMV FLL+FRLLQL+W+AKL +G  Q G W AEK+ L++
Sbjct: 709 RNALLESGGWIKANEVIVRIVTMVVFLLQFRLLQLTWAAKLKEGH-QKGSWAAEKKVLYL 767

Query: 764 SFSLYAPGAIIFYLFNWREHNHYLGFLSS---PQRFYPQPQRWEGLKLYTVFVLDGFLLP 820
           +   Y  G +I   FN R  N Y   + S   P   Y Q   W  L+ Y   VLDGFL P
Sbjct: 768 ALPSYVAGCLIALFFN-RGKNEYGAAVQSYSLPD--YQQHSLWGDLRSYAGLVLDGFLFP 824

Query: 821 QILFNIFRNSKDNALASSFYIGVTSLRLLPHAY--HALHTN--------------ADYFS 864
           QIL N+F +S   AL+ SFY+G T +RLLPH Y  +  H N              AD++S
Sbjct: 825 QILLNMFTSSTVKALSHSFYVGTTFVRLLPHTYDLYRAHNNAISFNGSYIYANPGADFYS 884

Query: 865 DACNIIVSVGGMMFAAVIFLQQLFGGCCNDRKKFIDGQAYEKVSIVS 911
            A ++I+  GG++F+A+IFLQQ FGG C   K+F + +AYEK+ +VS
Sbjct: 885 TAWDVIIPCGGLLFSAIIFLQQRFGGRCILPKRFRELEAYEKIPVVS 931




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225461435|ref|XP_002282360.1| PREDICTED: uncharacterized protein LOC100260511 [Vitis vinifera] gi|302143014|emb|CBI20309.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359493663|ref|XP_002282384.2| PREDICTED: uncharacterized protein LOC100245140 [Vitis vinifera] Back     alignment and taxonomy information
>gi|147822078|emb|CAN77048.1| hypothetical protein VITISV_027858 [Vitis vinifera] Back     alignment and taxonomy information
>gi|302143012|emb|CBI20307.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359493667|ref|XP_002282367.2| PREDICTED: uncharacterized protein LOC100255441 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224126567|ref|XP_002329586.1| predicted protein [Populus trichocarpa] gi|222870295|gb|EEF07426.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255581823|ref|XP_002531712.1| conserved hypothetical protein [Ricinus communis] gi|223528655|gb|EEF30671.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|255575730|ref|XP_002528764.1| conserved hypothetical protein [Ricinus communis] gi|223531767|gb|EEF33586.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|224125506|ref|XP_002329822.1| predicted protein [Populus trichocarpa] gi|222870884|gb|EEF08015.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query913
TAIR|locus:2119078962 AT4G21700 "AT4G21700" [Arabido 0.925 0.878 0.350 2.5e-120
TAIR|locus:20115661059 AT1G52780 "AT1G52780" [Arabido 0.327 0.282 0.272 2.7e-22
TAIR|locus:2119078 AT4G21700 "AT4G21700" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1184 (421.8 bits), Expect = 2.5e-120, P = 2.5e-120
 Identities = 329/939 (35%), Positives = 474/939 (50%)

Query:    24 NSFLSSATQISYSDHCNSIVPESTLNKFEPALSSFPRL--HTGYYTGGD----EILSQNA 77
             +SF+  A +I YSDHCN IVPES ++    A+ S   L     +++GGD       SQN 
Sbjct:    48 HSFI--APRIPYSDHCNHIVPESPIDPSPSAVFSHASLAFDVSFFSGGDLFFNRFQSQNG 105

Query:    78 --YSLTFRTPNVYKTEKDG-VFGIEGTLLLRSRNTYSSDG--GVTYVQVAKSYDPGAISH 132
                S  FR  ++ KT  DG ++ +E  L L+   T +S    G  + Q  K      I  
Sbjct:   106 DVKSARFRPKSIRKTLGDGKIYKVEAKLTLQISKTSASSSYYGGDFGQ--KKLQVMQIDG 163

Query:   133 EPGXXXXXXXXXXXXHGFWSESSGNLCMVGTED-------ELPNLAAVLKLSNLKNSSVV 185
                            +GFWSES+G +CMVG+          L    A L L+  K S++ 
Sbjct:   164 R----SSWGGASFDFYGFWSESTGQVCMVGSTQVLSVEGTRLKIFDARLMLNYSKESNIY 219

Query:   186 TTLVSGRLECMSSANDLNYFEPISILIPPR--MSYEYSLASKD-LSNEFSGGNDTVKCLP 242
              +LV G LE   S + L+ F+ + IL      ++YEY L  +  L    +GG      L 
Sbjct:   220 GSLVKGVLE---SVDSLSEFKTVLILGARNTPLNYEYKLLEQSKLDCGVNGGES----LS 272

Query:   243 LSSLPRTSFCSVVLGGNE-FNLKYSSNCSSANICSPFSDSTDGYFPRVVSLKQIXXXXXX 301
             L ++     C V  G +  F L Y ++C   + CSPF    + Y P  +S+  +      
Sbjct:   273 LENV-LGGMCKVFEGRSHVFGLMYRNDCGVDHSCSPFGSDVE-YTPGFMSM--LSFLCDG 328

Query:   302 XXXXXXXXFPNSSYVGYYHPFDPNRTLVAEGYWDDKMNKLFIVACRFLNSAESLANAYIG 361
                     F N S      PFDP  +LVAEG WD + N+   VACR LN ++SL+NA + 
Sbjct:   329 EKMRMLLSFSNMSGYSSLFPFDPRTSLVAEGSWDVERNRFCGVACRILNFSDSLSNAVVD 388

Query:   362 DCTTRLSLSFPSIWSIRQSRNIVGEIWSKKAVSDSGYFEKIHFQNSENSFRTVSGLKYEY 421
             DC+ RLSL FP+I SI+    +VGE+WS +A SD  YF +I F +  +       L+YEY
Sbjct:   389 DCSLRLSLRFPAILSIKSMAPVVGELWSAQAESDPSYFRRIEFSSLNDQLWRFPSLRYEY 448

Query:   422 SEINRARELCWP-KWKPQKSNGKKYPSEHSYDMQFNIRV-HRPNANSSR-GYATPLSAGD 478
             +E  R  +LC   K +P K  G  YP   + DM+F + V +    N  R   A+P   GD
Sbjct:   449 TESERVGKLCGAGKSRP-KRKGNHYPDAQTSDMRFVMSVKYSGEGNVLRTARASPYFVGD 507

Query:   479 QFYPRYLYSKTPLSSSTSRPTVQESFNRNSQVNISYKIGIRLLPGATFGGQVYSLDISRS 538
             + Y R L  +      T  P    S  + S  NI+Y+I   L P +   G +Y       
Sbjct:   508 RLY-RDLLVRGQGVGLTGIPMNVNSVTK-SFTNITYRIR-SLNPNSESRGDIY------- 557

Query:   539 SYSGVEISAEGIYDSKTGQLCMVGCRSI-VSNNLSSTSDSMDCEILLNFQFPPSNPKENE 597
                     AEG YD  TG+LCMVGC+S+ + N ++  ++++DC + +   F P + + ++
Sbjct:   558 --------AEGTYDRDTGELCMVGCQSVRLKNTVAIQNETVDCSLAIKINFSPIDSR-SD 608

Query:   598 DHIKGSIKSMRAESDPLYFEPMEVYSVSYSALAVKKSISKMDWEITVALISNTLACIFVG 657
             D +KG+IKS R ++DPLY   MEV S S      K+S+ +MD E+ + L+SNTL+C+F+G
Sbjct:   609 DRLKGTIKSTREKTDPLYVGRMEVLSRSIYVHQAKESVWRMDLEVAMVLVSNTLSCLFLG 668

Query:   658 LQLLHVKKHPEVXXXXXXXXXXXXXXXXXXXXXXNFEALFLKNLDRPRVLLSRGGWLEVN 717
             +QL H+K+H E                       NFE LF  + ++  +      WLE  
Sbjct:   669 MQLYHMKQHQEALPFISVAMLILITLGHMIPLLLNFEELFKGSHNQRNLFFENDRWLEAK 728

Query:   718 EVLVRIITMVAFLLEFRLLQLSWSA-KLADGQDQPGLWLAEKRSLFVSFSLYAPGAIIFY 776
             E++VRI+T++AFLLE RLLQL+W+A K  D   +  +W AEK+  +V   LY  G +I +
Sbjct:   729 EIVVRIVTLIAFLLECRLLQLAWTARKTGDHHHREDVWKAEKKVSYVCLPLYITGGLIAW 788

Query:   777 LFNWREHNHYLGFLSSPQ------------RFYPQPQRWEGLKLYTVFVLDGFLLPQILF 824
             L N       + ++  PQ            R + +P  W+ LK Y   +LD FLLPQILF
Sbjct:   789 LVNRNRTPKRIVYIGKPQARNLLYRPVNLKRSFQRPPLWKDLKSYGGLMLDAFLLPQILF 848

Query:   825 NIFRNSKDNALASSFYIGVTSLRLLPHAY-----HA---------LHTN--ADYFSDACN 868
             N F NS    LA+ FY+G + +RLLPHAY     H+         ++ N   DY+S A +
Sbjct:   849 NGFSNSDLKPLAALFYVGNSFVRLLPHAYDLYRSHSYGKILDWSFIYANHKMDYYSTAWD 908

Query:   869 IIVSVGGMMFAAVIFLQQLFGGCCNDRKKFIDGQAYEKV 907
             II+   G +FA +IFLQQ FGG C   K+F +   YEKV
Sbjct:   909 IIILCIGFLFAFLIFLQQRFGGRCFIPKRFREYVGYEKV 947




GO:0008150 "biological_process" evidence=ND
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0005768 "endosome" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0005802 "trans-Golgi network" evidence=IDA
TAIR|locus:2011566 AT1G52780 "AT1G52780" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00027671001
SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (896 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query913
pfam11145871 pfam11145, DUF2921, Protein of unknown function (D 1e-180
>gnl|CDD|221000 pfam11145, DUF2921, Protein of unknown function (DUF2921) Back     alignment and domain information
 Score =  542 bits (1399), Expect = e-180
 Identities = 314/934 (33%), Positives = 458/934 (49%), Gaps = 143/934 (15%)

Query: 35  YSDHCNSIVPESTLNKFE----PALSSF--PRLHTGYY-TGGDEILSQN-------AYSL 80
           YSDHC+SIVPES+  K E    P + S         ++ +GGD +  ++           
Sbjct: 1   YSDHCSSIVPESSELKDEDPTRPLVRSRQLSFFDGDWFQSGGDPLFPRDGSDAGDSLRLA 60

Query: 81  TFRTPNVYKTEKDG-VFGIEGTLLLR-SRNTYSSD-GGVTYVQVAKSYDPGAISHEPGVR 137
           +F   ++ KT + G +  +EG L+L  SR + SS      + Q +  ++       PG  
Sbjct: 61  SFSVTHIRKTRRAGKIIKVEGVLVLTISRTSASSSYYSGDHGQSSLEFE-----LIPGGT 115

Query: 138 RRRSLVRFRLHGFWSESSGNLCMVGT----EDELPNLA----AVLKLSNLKNSSVVTTLV 189
           +    +     GF+SES G LCMVG+      + P +     A+L L   K S++ T LV
Sbjct: 116 Q----LSIVFQGFYSESEGVLCMVGSGVLKSVDGPPVKLDEDALLMLRYPKESTLTTRLV 171

Query: 190 SGRLECMSSANDLNYFEPISILIPP--RMSYEYSLASKD-----LSNEFSGGNDTVKCLP 242
           +G LE   S +DL YF+ IS++  P    +YEY L ++        +    G  ++  L 
Sbjct: 172 TGELESTDSLSDLAYFDTISLVSYPGTPDNYEYELVAEACDPFMYKDTGVNGGSSLSDL- 230

Query: 243 LSSLPRTSFCSVVLGGNE--FNLKYSSNCSSANICSPFSDSTDGYFPRVVSLKQIECLEE 300
                   FC V+       F L+Y+ +C+S + CSPF    + Y P  +S++ + C E 
Sbjct: 231 ---YKGNGFCDVLERLTSRVFTLEYNWDCNSTDECSPFGGPFE-YTPVRISMQDVHC-EG 285

Query: 301 EKRLRVLVEFPNSSYVGYYHPFDP-----NRTLVAEGYWDDKMNKLFIVACRFLNSAESL 355
              +RV V F   S   + +PFDP     N TLVAEG WD    +L +VACR  NS+ SL
Sbjct: 286 NGAVRVSVVFRAVSPYEHLYPFDPRTGLRNMTLVAEGVWDASTGRLCMVACRIGNSSASL 345

Query: 356 ANAYIGDCTTRLSLSFPSIWSIRQSRNIVGEIWSKKA--VSDSGYFEKI----HFQNSEN 409
           +NA +GDC+ RLSL FP+ +SIR    +VGEIWS      +    F +I       NS N
Sbjct: 346 SNAVVGDCSLRLSLRFPTTFSIRDRSIVVGEIWSANTGPSNFPLSFRRIVPPSDMFNSFN 405

Query: 410 SFRT-VSGLKYEYSEINRARELCWP-KWKPQKSNGKKYP---SEHSY-DMQFNIRVHRPN 463
              +    +KYEY+++ RA +L    K   +K +   YP     +S  D+ F++ V    
Sbjct: 406 RSLSNPRVVKYEYTKVERAGKLLRRNKPSGKKKSLVSYPGNLGMYSLSDLAFDLSVKFSA 465

Query: 464 ANSSRGYATPLSAGDQFYPRYLYSKT-PLSSSTSRPTVQESFN--RNSQVNISYKIGIRL 520
             +  G A+PL  G   Y     S+    + +   P +    N   +  +N+SY I +  
Sbjct: 466 GPNRTGRASPLFVGPLLYRFDPLSRNSGSTRTAPYPGIPMVVNMQHSQLLNVSYDISL-- 523

Query: 521 LPGATFGGQVYSLDISRSSYSGVEISAEGIYDSKTGQLCMVGCRSI-VSNNLSSTSDSMD 579
                       L  SRS      ISAEG+YD +TG+LCMVGCR + +   +SS  + MD
Sbjct: 524 ---------SGPLSGSRS-----VISAEGVYDRETGRLCMVGCRDVRLPWRISSNEEGMD 569

Query: 580 CEILLNFQFPPSNPKENEDHIKGSIKSMRAESDPLYFEPMEVYSVSYSALAVKKSISKMD 639
           C ILL                          S P+Y+               K SI +MD
Sbjct: 570 CSILLR-------------------------STPIYYRR-----------QAKDSIWRMD 593

Query: 640 WEITVALISNTLACIFVGLQLLHVKKHPEVLPSISLFMLLLLTLGHMIPLMLNFEALFLK 699
            E  + ++S TL+C+F GLQL HVK HP+VLP +SL ML +  LG+M PL+LNFEALF  
Sbjct: 594 LEGIMVVVSLTLSCVFAGLQLFHVKSHPDVLPFVSLVMLGVQALGYMTPLVLNFEALFKG 653

Query: 700 NLDRPRVLLSRGGWLEVNEVLVRIITMVAFLLEFRLLQLSWSAKLADGQDQPG-LWLAEK 758
           +       L R GWLE NEV VR++T++AFLL  RLLQL W ++       P     AE+
Sbjct: 654 SHRTQNTPLERDGWLEANEVTVRVLTLIAFLLTLRLLQLVWRSRARALARSPEEPSPAER 713

Query: 759 RSLFVSFSLYAPGAIIFYLFNWREHNHYLGFLSSPQ---RFYPQPQRWEGLKLYTVFVLD 815
           + L+V   LY  G +I    +    N  + ++  PQ     +  P  W  L+ Y   VLD
Sbjct: 714 KVLYVCLPLYLLGGLIALAVHRIRTNKGIVYIEKPQVVRISFQSPTLWADLESYAGLVLD 773

Query: 816 GFLLPQILFNIFRNSKDNALASSFYIGVTSLRLLPHAYHAL-----------------HT 858
           GFLLPQ++FN F +S+   L++ FY+G+T +RLLPH Y  L                 + 
Sbjct: 774 GFLLPQVIFNAFWSSRCKPLSAWFYVGITLVRLLPHVYDLLRAHNYVPYFRGSSFIYANP 833

Query: 859 NADYFSDACNIIVSVGGMMFAAVIFLQQLFGGCC 892
             D+FS A ++I+ +  ++ A +IFLQQ +GG C
Sbjct: 834 KMDFFSTAWDVIIPLVAVLLALLIFLQQRWGGAC 867


This eukaryotic family of proteins has no known function. Length = 871

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 913
PF11145909 DUF2921: Protein of unknown function (DUF2921); In 100.0
PF11145 909 DUF2921: Protein of unknown function (DUF2921); In 100.0
KOG0828636 consensus Predicted E3 ubiquitin ligase [Posttrans 99.91
>PF11145 DUF2921: Protein of unknown function (DUF2921); InterPro: IPR021319 This eukaryotic family of proteins has no known function Back     alignment and domain information
Probab=100.00  E-value=1.1e-216  Score=1916.65  Aligned_cols=829  Identities=41%  Similarity=0.677  Sum_probs=726.1

Q ss_pred             ccccCCCCCCCCCCCCCCCCC------CCCCccceeee-ecCCcccCC-----C--CceeEeecCceeecCCCc-EEEEE
Q 047792           35 YSDHCNSIVPESTLNKFEPAL------SSFPRLHTGYY-TGGDEILSQ-----N--AYSLTFRTPNVYKTEKDG-VFGIE   99 (913)
Q Consensus        35 Y~~hC~~~vP~~~~~~~~~~~------~~~~~~~~gyf-~GG~~~f~~-----~--~~s~sf~~~~v~~T~~~~-v~~v~   99 (913)
                      |++||++++|+++.++++.++      ++++++++||| +|||.||++     .  .|+|||+|++|+||++++ |+||+
T Consensus         1 Y~~hC~svvp~a~~l~~~~~~~~~~~s~~L~~~~ggyfq~GGd~Lfp~d~s~~~~~~r~~SF~~~~V~~T~~~~~vv~Vs   80 (909)
T PF11145_consen    1 YKRHCASVVPSASELKDDDDTRSLLISFELSFFNGGYFQAGGDPLFPFDDSDSPSSLRSFSFWPTHVDRTTRPGKVVKVS   80 (909)
T ss_pred             CcccccCCCCCccccccccCcccccccccccCCCCCeecCCCCCCCCCCccccccccceEEEEeeeeccccCCCcEEEEE
Confidence            899999999999976444433      33467799999 999999877     2  378999999999999999 99999


Q ss_pred             EEEEEEecccccCCCCceeeecccccCCCCCCCCCCccccceeEEEEEeeeeecCCCceeccccCC--------CCCCcc
Q 047792          100 GTLLLRSRNTYSSDGGVTYVQVAKSYDPGAISHEPGVRRRRSLVRFRLHGFWSESSGNLCMVGTED--------ELPNLA  171 (913)
Q Consensus       100 atl~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lsf~l~G~ysessg~LCMvG~g~--------~~~~~~  171 (913)
                      |+|+|+++|......       ...|++++.+.++....++++|+|+|||||||++|+|||||+|+        +++|+|
T Consensus        81 g~LtL~isr~~~~~~-------~~~~~~~~~~~~~~~~pg~ssLsf~LeG~YSe~sg~LCMVGsgs~~s~~g~~v~~~~~  153 (909)
T PF11145_consen   81 GTLTLSISRNSARSS-------YYYYDHRRRSPEFYRWPGRSSLSFSLEGFYSEGSGVLCMVGSGSGYSNDGPPVKLDDN  153 (909)
T ss_pred             EEEEEEeecCCCCcc-------ccccccccCCcceecCCCceEEEEEEEEEEEcCCCcEEEeccccccCCCCCceeeecc
Confidence            999999887643211       22333444444333333478999999999999999999999994        567889


Q ss_pred             eEEEEeccCCCcceeceeeEEEeeccCCCCCCCcccEEEeecCC--CceeeeccccccccCCCCCC--cccccCCcccCC
Q 047792          172 AVLKLSNLKNSSVVTTLVSGRLECMSSANDLNYFEPISILIPPR--MSYEYSLASKDLSNEFSGGN--DTVKCLPLSSLP  247 (913)
Q Consensus       172 vvL~LryP~~~slt~~~V~G~LeS~~~~~~~~YFd~Vslls~~~--~~Y~Yt~~~~~~~~~~~~~~--~~~~~l~~~~~~  247 (913)
                      |+|+|||||++|||+|+|+|+|||+|+++|++|||||+|++|++  +||+|++++++|+..|.++.  ++..+++ .++.
T Consensus       154 ~vL~LryPk~~sLtsr~V~G~LeS~n~~~d~~YFd~VsLls~~~~~~~Y~Y~lv~~sc~~~~~~d~~~~~~~~~~-~~~~  232 (909)
T PF11145_consen  154 AVLVLRYPKPSSLTSRFVTGELESLNSKSDSAYFDPVSLLSQLEGYSNYEYTLVSKSCDPPPYGDGDVGDGSSLS-DVYS  232 (909)
T ss_pred             eEEEEcCCCcccccccceeEEEEecCCCCCccccceeEEEecCCCccCceEEEccccCCCCcccccccccccccc-cccC
Confidence            99999999999999999999999999999999999999999999  79999999999877665542  2334456 6788


Q ss_pred             CccccccccC--CCeeeEeeCCCCCCCCccCCCCCCCCCCCCceeEEeeeeecccCceeEEEEEEeCCCccc-----ccc
Q 047792          248 RTSFCSVVLG--GNEFNLKYSSNCSSANICSPFSDSTDGYFPRVVSLKQIECLEEEKRLRVLVEFPNSSYVG-----YYH  320 (913)
Q Consensus       248 ~~~~C~~l~~--~~~~~l~y~~~c~s~~~C~Pf~~~~~~~l~~~m~~~~~~C~~~~~~~r~~~vF~~~~~~~-----~~~  320 (913)
                      +.++|++|.+  .++|+|||+|+|++++.|+|+++..+. .|.+|+||++||+++ +++||++||+|+++.+     ..|
T Consensus       233 ~~~~C~~L~~~~~~~f~l~y~~~C~st~~~~~~~gp~~~-~~~~m~~~~v~C~~~-g~vrv~~vF~~~~~~e~~~~~~~r  310 (909)
T PF11145_consen  233 GNFFCSILRRFLRGSFKLEYNWDCNSTDACCSFGGPFGL-LPVRMHMQQVRCEED-GAVRVSAVFRNVSPSEHYYPARPR  310 (909)
T ss_pred             CCCCChhhHhcCCCceEeEECCCCCCcccccCCCCCccc-CCceEEEEeeEecCC-CcEEEEEEEcCCCchhhccccccc
Confidence            9999999966  778999999999998889999977665 567899999999997 4999999999988743     556


Q ss_pred             cCCCCceEEEEEEEecCCCceEEEEEeeccccccccccccccCceEEEEEcCCcceeeccceEEEEEEeCCC--CCCCCC
Q 047792          321 PFDPNRTLVAEGYWDDKMNKLFIVACRFLNSAESLANAYIGDCTTRLSLSFPSIWSIRQSRNIVGEIWSKKA--VSDSGY  398 (913)
Q Consensus       321 ~~~~~~tlvaEG~Wd~ssgqLCMVgC~~~~s~~S~~~~~v~dC~irL~LrfP~~~SIt~RS~V~G~I~S~~~--~sds~y  398 (913)
                      ++++|+||+|||+||+++|||||||||++++++|.+++.++||+|||+||||++|||||||+|+|+|||+++  .+|+++
T Consensus       311 ~gl~~~tLvAEG~Wd~s~gqLCmvaCrv~~~~~s~~~~~v~dC~ir~sl~FPav~SIr~RS~v~G~I~s~~~~~~~~~~~  390 (909)
T PF11145_consen  311 TGLSNMTLVAEGVWDSSSGQLCMVACRVGNSDDSLANAGVGDCSIRMSLWFPAVWSIRQRSIVVGQIWSNSQGSSNDPLY  390 (909)
T ss_pred             ccccCceEEEEeeEcCCCCcEEEEeeeeccccccccccccCCCCceEEEEecCeEEEeecceEEEEEecCCccccCCCcc
Confidence            677899999999999999999999999999999999999999999999999999999999999999999998  788899


Q ss_pred             cceeE-----EeeccCccCccCCCceeecchhchhhhcCCCCCcCccc---CCcCCCC----CCCCceEEEEeeCCCC-C
Q 047792          399 FEKIH-----FQNSENSFRTVSGLKYEYSEINRARELCWPKWKPQKSN---GKKYPSE----HSYDMQFNIRVHRPNA-N  465 (913)
Q Consensus       399 Fd~Is-----f~s~~~~~~~~sg~~Y~YT~ve~A~k~c~~~~~p~k~~---g~~yP~~----~S~dl~f~~s~~~~~~-~  465 (913)
                      |+.|.     +.+..+...++++.+|+|||+|+|+|+| .+++|.++|   +++||++    ..+||+|+++++.+.+ +
T Consensus       391 f~~i~~~s~~~~~~~~~~~~l~~lkY~YTkvd~A~k~~-~~~~~~~~kks~~~~yP~~~~~~s~sDl~fdl~v~~s~~~~  469 (909)
T PF11145_consen  391 FSRIVSPSELFNSFGNSSSNLSGLKYNYTKVDEAKKHC-RRNEPSKFKKSLGLSYPDNLGNYSSSDLRFDLSVRNSAGPD  469 (909)
T ss_pred             hhheeeeccccccccccccCccCceeeeeeHHHHHHHH-HhcCCcccccccCCCCCCccccccHhhhcccEEEecccccc
Confidence            99887     5555666678888999999999999999 777776544   6899987    4599999999998876 6


Q ss_pred             CCcccccccccCCccccccccccccCcCCCCCc------ceeecccccceeEEEEEEEEeeCCCcccCCccccccccccc
Q 047792          466 SSRGYATPLSAGDQFYPRYLYSKTPLSSSTSRP------TVQESFNRNSQVNISYKIGIRLLPGATFGGQVYSLDISRSS  539 (913)
Q Consensus       466 ~~~g~a~Pf~~g~~~~~~~~~~~~~~~~~~~r~------~~~~~~~~~~llNVSy~i~~~~~P~~~~g~~~~t~~~~~~~  539 (913)
                      +.+|++.|+++|+.+.+++..   ...+...++      ....+++++.++||||+|++.       ++.         .
T Consensus       470 ~~~g~a~plslG~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~llNVSy~i~~~-------~~~---------~  530 (909)
T PF11145_consen  470 LPSGYASPLSLGSLFGRGDPL---SADDSFSRHAASPSSPEVTEMQHSRLLNVSYEISLS-------GSI---------S  530 (909)
T ss_pred             CCCCCcceEEECchhcccCcc---ccCcccccccccccccccccccccceeEEEEEEEEc-------ccc---------c
Confidence            788999999999999776554   112211111      111234555699999999995       432         3


Q ss_pred             ccceeEEEEEEEeCCCCeEEEEeeccc-ccCCCCCCCCCCCcceEEEEEeCCCCCCCCCceEEEEEEecCCCCCCCcccc
Q 047792          540 YSGVEISAEGIYDSKTGQLCMVGCRSI-VSNNLSSTSDSMDCEILLNFQFPPSNPKENEDHIKGSIKSMRAESDPLYFEP  618 (913)
Q Consensus       540 ~~~~~IsAEGVYD~~tG~LCMVGCR~v-~s~~~~~~~~~~DC~I~V~l~fP~~~s~r~~~~i~G~I~S~R~~~DPL~F~~  618 (913)
                      ...++|+|||||||+||+|||||||++ .+|+....|+++||+|+|+|||||++ +|.++++||+|+|+|+|+|||||++
T Consensus       531 ~~~~~isaEGvYD~~~G~lclVGCR~v~~~~~~~~~~~~~DC~I~V~vq~pp~~-~~~~~~~kg~I~S~R~~~DpL~F~~  609 (909)
T PF11145_consen  531 SNSSQISAEGVYDPKTGRLCLVGCRDVRLNWNISSNESSMDCEILVTVQFPPLD-AKVNPTIKGSISSTRDKSDPLYFEP  609 (909)
T ss_pred             ceEEEEEEEeeeeCCCCeEEEEeccccccCccccccCCCCCeeEEEEEEcCCCC-CCCCCcEEEEEEeccCCCCCccccc
Confidence            357999999999999999999999999 56666666889999999999999999 7789999999999999999999999


Q ss_pred             eeeechhhh-HHHHhhhhccchhhhhHHHhHhhhHHHHHhhhheecccCCCCcchhHHHHHHHHHHhhccccccchhhhc
Q 047792          619 MEVYSVSYS-ALAVKKSISKMDWEITVALISNTLACIFVGLQLLHVKKHPEVLPSISLFMLLLLTLGHMIPLMLNFEALF  697 (913)
Q Consensus       619 l~l~~~~~y-~~~~~~~i~R~d~E~im~~~s~tl~c~f~~lQL~h~k~~~~~~P~iSlvML~vqaLGy~~pLvl~~EaLF  697 (913)
                      ++|++++|| ++|++|+|||||||+||+++|+||+|+|+++||+|+|||||++|+||||||+|||||||+|||+||||||
T Consensus       610 ~~l~~~~~~~~~q~~~~i~R~d~E~i~~~~s~tl~~~~~~~QL~~~k~~~~~~P~iSlvML~v~aLGy~~pLv~n~EaLf  689 (909)
T PF11145_consen  610 LDLSTYPIYYRKQAEESIWRMDLEGIMRVISLTLSCVFIGLQLFHVKKHPDVLPYISLVMLGVQALGYMIPLVLNFEALF  689 (909)
T ss_pred             eeeeeccceeccccchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhhcCCCccchHhHHHHHHHHHhccchhhcCHHHHc
Confidence            999999965 5599999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCcceeccCCccchhhhHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCcc--ccceeEEEEEehhhhhhhhee
Q 047792          698 LKNLDRPRVLLSRGGWLEVNEVLVRIITMVAFLLEFRLLQLSWSAKLADGQDQPGLW--LAEKRSLFVSFSLYAPGAIIF  775 (913)
Q Consensus       698 ~~~~~~~~~~~~~~~w~~~ne~~vR~~tlvAflL~lRLlqlvw~aR~~~~~~~~~~~--~se~~vl~~~l~ly~~G~li~  775 (913)
                      +.++++|++++++++|+|+||++||++|||||||||||+|||||||+++.++ +..|  ++||||||+|+|+|++|++|+
T Consensus       690 ~~~~~~~~~~~~~~~w~e~~e~~vr~ltmvAflL~lRL~qlvw~aR~~~~~~-~~~~~~~sek~vl~~~l~ly~~G~li~  768 (909)
T PF11145_consen  690 KSSHNRQNIFLDSGGWLEVNEVMVRLLTMVAFLLQLRLLQLVWSARIRDGAR-KPLEPWPSEKKVLYICLPLYIAGGLIA  768 (909)
T ss_pred             CcCCCCceEEeecCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc-CCCCCCCccceEEEEEeHHHHHHHHHh
Confidence            9888999999999999999999999999999999999999999999998874 6555  999999999999999999999


Q ss_pred             eeeeccccccccc---cccCCCCCCCCCchhhhhhhhHHHHhhcchhHHHHHHhhcCCCCccccccccchhhhhhcccce
Q 047792          776 YLFNWREHNHYLG---FLSSPQRFYPQPQRWEGLKLYTVFVLDGFLLPQILFNIFRNSKDNALASSFYIGVTSLRLLPHA  852 (913)
Q Consensus       776 ~~~h~~~~~~~~~---~~~~~~~~~~~~~~w~~l~~y~gLvlD~FLLPQIi~N~~~~s~~kpLs~~fY~G~T~~Rllph~  852 (913)
                      |++|+.+++.+..   ........++++..|+|||+|+||+||||||||||+|++|++|+|||+++||+|+|++|||||+
T Consensus       769 l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~y~GLv~D~FLLPQii~N~~~~~~~~~Ls~~fY~G~T~~Rllph~  848 (909)
T PF11145_consen  769 LIVHASKTNSRRARREESYDSRISHQQHSWWEDLKSYAGLVLDGFLLPQIIGNAFWQSKVKPLSKSFYVGTTLVRLLPHV  848 (909)
T ss_pred             hhhhhhcccccccccccccccccccccccHHHHHHHhhhHHHhhhhHHHHHHHHHhccCCcccccceeehHHHHHHHHHH
Confidence            9999997743221   1122456777899999999999999999999999999999999999999999999999999999


Q ss_pred             eeeccC-----------------CCcccccccceeehHHHHHHHHHHHHHhHhCCceecc
Q 047792          853 YHALHT-----------------NADYFSDACNIIVSVGGMMFAAVIFLQQLFGGCCNDR  895 (913)
Q Consensus       853 Yd~~r~-----------------~~df~s~~~di~ip~~~~~~a~~~~~Qqr~g~~~~~p  895 (913)
                      ||++|+                 ++|||+++|||+|||++++||++||+|||||++||+|
T Consensus       849 Yd~~r~~~~~~~~~~~~~~ya~~~~dfys~awDi~Ip~~a~llA~~v~~QQr~~~~~~~~  908 (909)
T PF11145_consen  849 YDLYRAPNYVPYFDDESYVYANPRMDFYSTAWDIVIPCGAVLLAALVYLQQRWGGRCILP  908 (909)
T ss_pred             HhhccccccCcccccccccccCccccccccccceeeehHHHHHHHHHHHHhhhCCeeecc
Confidence            999998                 6899999999999999999999999999999999997



>PF11145 DUF2921: Protein of unknown function (DUF2921); InterPro: IPR021319 This eukaryotic family of proteins has no known function Back     alignment and domain information
>KOG0828 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query913
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-07
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 60.6 bits (146), Expect = 2e-09
 Identities = 86/549 (15%), Positives = 143/549 (26%), Gaps = 165/549 (30%)

Query: 16  FFLTAFCLN-SFLSSATQISYSD-HCNSIVPESTLNKFEPALSSFPRLHTGYYTGGDEI- 72
           F      +N  FL S  +         + +     ++       F + +    +      
Sbjct: 82  FVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNV---SRLQPYL 138

Query: 73  -LSQNAYSLTFRTPNVYKTEKDGVFGIEG---TLL----LRSRNTYSS-DGGVTYVQVAK 123
            L Q    L     NV       + G+ G   T +      S       D  + ++ +  
Sbjct: 139 KLRQALLELR-PAKNV------LIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKN 191

Query: 124 SYDPGAI-------------------SHEPGVRRRRSLVRFRLHGFWSESSGNLCMVGTE 164
              P  +                    H   ++ R   ++  L           C+    
Sbjct: 192 CNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCL---- 247

Query: 165 DELPNLAAVLKLSNLKNSSVV-------TTLVSGRLECMSSANDLNYFEPISILIPPRMS 217
                    L L N++N+            L++ R + ++          IS L    M+
Sbjct: 248 ---------LVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHIS-LDHHSMT 297

Query: 218 YEYSLASKDLSNEFSGGNDTVKCL--PLSSLPRTSFCSVVLGGNEFNLKYSSNCSSANIC 275
                  K L           K L      LPR      VL  N   L        A   
Sbjct: 298 LTPD-EVKSL---LL------KYLDCRPQDLPR-----EVLTTNPRRL-----SIIAESI 337

Query: 276 SPFSDSTDGYFPRV----------VSLKQIECLEEEKRLRVLVEFPNSSYVGYYHPFDPN 325
                + D  +  V           SL  +E  E  K    L  FP S+++       P 
Sbjct: 338 RDGLATWD-NWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHI-------PT 389

Query: 326 RTLVAEGYW-DDKMNKLFIVACRFLNSAESLANA-------YIGDCTTRLSLSFPSIWSI 377
             L     W D   + + +V  +      SL           I      L +   + +++
Sbjct: 390 ILLSL--IWFDVIKSDVMVVVNKLHKY--SLVEKQPKESTISIPSIYLELKVKLENEYAL 445

Query: 378 RQSRNIVG--------EIWSKKAVSDSGYF-EKI--HFQNSENS-----FRTVSGLKYEY 421
              R+IV         +           YF   I  H +N E+      FR V      +
Sbjct: 446 H--RSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMV------F 497

Query: 422 SEINRARELCWPKWKPQKSNGKKYPSEHSYDMQFNIRVHRPNANSSRGYATPLSAGDQFY 481
            +           +  QK                 IR H   A ++ G         +FY
Sbjct: 498 LDFR---------FLEQK-----------------IR-HDSTAWNASGSILNTLQQLKFY 530

Query: 482 PRYLYSKTP 490
             Y+    P
Sbjct: 531 KPYICDNDP 539


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00