List of proteins associated with COG cluster: COG0099   RpsM Ribosomal protein S13 [Translation, ribosomal structure and biogenesis]
Protein ID
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analysis report

Similarity with COG COG0099
All predicted COG clusters
1g008575m 561 hhsearch probability: 93.68    Identity: 21%
subject length: 121   Length of aligned reigon: 43
Coverage over query: 346-390   Coverage over subject: 20-62
COG1389, DNA topoisomerase VI, subunit B [DNA replication, recombination, and repair]
COG0323, MutL DNA mismatch repair enzyme (predicted ATPase) [DNA replication, recombination, and repair]
COG0187, GyrB Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [DNA replication, recombination, and repair]
COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms]
COG0326, HtpG Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones]
COG5002, VicK Signal transduction histidine kinase [Signal transduction mechanisms]
COG2205, KdpD Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms]
COG3290, CitA Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms]
COG0642, BaeS Signal transduction histidine kinase [Signal transduction mechanisms]
COG3852, NtrB Signal transduction histidine kinase, nitrogen specific [Signal transduction mechanisms]
COG4251, Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Signal transduction mechanisms]
COG5000, NtrY Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation [Signal transduction mechanisms]
COG4192, Signal transduction histidine kinase regulating phosphoglycerate transport system [Signal transduction mechanisms]
COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]
COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms]
COG0643, CheA Chemotaxis protein histidine kinase and related kinases [Cell motility and secretion / Signal transduction mechanisms]
COG3850, NarQ Signal transduction histidine kinase, nitrate/nitrite-specific [Signal transduction mechanisms]
COG3920, Signal transduction histidine kinase [Signal transduction mechanisms]
COG3851, UhpB Signal transduction histidine kinase, glucose-6-phosphate specific [Signal transduction mechanisms]
COG2172, RsbW Anti-sigma regulatory factor (Ser/Thr protein kinase) [Signal transduction mechanisms]
COG3275, LytS Putative regulator of cell autolysis [Signal transduction mechanisms]
COG0099, RpsM Ribosomal protein S13 [Translation, ribosomal structure and biogenesis]
COG4564, Signal transduction histidine kinase [Signal transduction mechanisms]
1g022922m 290 hhsearch probability: 96.56    Identity: 31%
subject length: 121   Length of aligned reigon: 49
Coverage over query: 169-220   Coverage over subject: 13-61
COG0266, Nei Formamidopyrimidine-DNA glycosylase [DNA replication, recombination, and repair]
COG1293, Predicted RNA-binding protein homologous to eukaryotic snRNP [Transcription]
COG0099, RpsM Ribosomal protein S13 [Translation, ribosomal structure and biogenesis]
COG1389, DNA topoisomerase VI, subunit B [DNA replication, recombination, and repair]
1g022931m 290 hhsearch probability: 96.56    Identity: 31%
subject length: 121   Length of aligned reigon: 49
Coverage over query: 169-220   Coverage over subject: 13-61
COG0266, Nei Formamidopyrimidine-DNA glycosylase [DNA replication, recombination, and repair]
COG1293, Predicted RNA-binding protein homologous to eukaryotic snRNP [Transcription]
COG0099, RpsM Ribosomal protein S13 [Translation, ribosomal structure and biogenesis]
COG1389, DNA topoisomerase VI, subunit B [DNA replication, recombination, and repair]
1g015345m 408 hhsearch probability: 95.80    Identity: 34%
subject length: 121   Length of aligned reigon: 41
Coverage over query: 180-220   Coverage over subject: 21-61
COG0266, Nei Formamidopyrimidine-DNA glycosylase [DNA replication, recombination, and repair]
COG1293, Predicted RNA-binding protein homologous to eukaryotic snRNP [Transcription]
COG0099, RpsM Ribosomal protein S13 [Translation, ribosomal structure and biogenesis]
1g024924m 260 hhsearch probability: 97.07    Identity: 33%
subject length: 121   Length of aligned reigon: 40
Coverage over query: 181-220   Coverage over subject: 22-61
COG0266, Nei Formamidopyrimidine-DNA glycosylase [DNA replication, recombination, and repair]
COG0099, RpsM Ribosomal protein S13 [Translation, ribosomal structure and biogenesis]
COG1293, Predicted RNA-binding protein homologous to eukaryotic snRNP [Transcription]
COG1389, DNA topoisomerase VI, subunit B [DNA replication, recombination, and repair]
1g033487m 118 hhsearch probability: 99.96    Identity: 39%
subject length: 121   Length of aligned reigon: 85
Coverage over query: 12-118   Coverage over subject: 1-85
COG0099, RpsM Ribosomal protein S13 [Translation, ribosomal structure and biogenesis]
COG1389, DNA topoisomerase VI, subunit B [DNA replication, recombination, and repair]
COG0266, Nei Formamidopyrimidine-DNA glycosylase [DNA replication, recombination, and repair]
COG0030, KsgA Dimethyladenosine transferase (rRNA methylation) [Translation, ribosomal structure and biogenesis]
1g031813m 152 hhsearch probability: 100.00    Identity: 44%
subject length: 121   Length of aligned reigon: 119
Coverage over query: 12-152   Coverage over subject: 1-121
COG0099, RpsM Ribosomal protein S13 [Translation, ribosomal structure and biogenesis]
COG1389, DNA topoisomerase VI, subunit B [DNA replication, recombination, and repair]
COG0266, Nei Formamidopyrimidine-DNA glycosylase [DNA replication, recombination, and repair]
1g031812m 152 hhsearch probability: 100.00    Identity: 44%
subject length: 121   Length of aligned reigon: 119
Coverage over query: 12-152   Coverage over subject: 1-121
COG0099, RpsM Ribosomal protein S13 [Translation, ribosomal structure and biogenesis]
COG0266, Nei Formamidopyrimidine-DNA glycosylase [DNA replication, recombination, and repair]
1g033139m 126 hhsearch probability: 100.00    Identity: 37%
subject length: 121   Length of aligned reigon: 90
Coverage over query: 12-123   Coverage over subject: 1-90
COG0099, RpsM Ribosomal protein S13 [Translation, ribosomal structure and biogenesis]
COG1389, DNA topoisomerase VI, subunit B [DNA replication, recombination, and repair]
COG0266, Nei Formamidopyrimidine-DNA glycosylase [DNA replication, recombination, and repair]
COG0030, KsgA Dimethyladenosine transferase (rRNA methylation) [Translation, ribosomal structure and biogenesis]
1g031787m 153 hhsearch probability: 100.00    Identity: 44%
subject length: 121   Length of aligned reigon: 119
Coverage over query: 13-153   Coverage over subject: 1-121
COG0099, RpsM Ribosomal protein S13 [Translation, ribosomal structure and biogenesis]
COG1389, DNA topoisomerase VI, subunit B [DNA replication, recombination, and repair]
COG0266, Nei Formamidopyrimidine-DNA glycosylase [DNA replication, recombination, and repair]
1g031757m 153 hhsearch probability: 100.00    Identity: 49%
subject length: 121   Length of aligned reigon: 119
Coverage over query: 31-149   Coverage over subject: 1-121
COG0099, RpsM Ribosomal protein S13 [Translation, ribosomal structure and biogenesis]
1g030930m 169 hhsearch probability: 100.00    Identity: 50%
subject length: 121   Length of aligned reigon: 119
Coverage over query: 47-165   Coverage over subject: 1-121
COG0099, RpsM Ribosomal protein S13 [Translation, ribosomal structure and biogenesis]
1g033150m 126 hhsearch probability: 99.94    Identity: 38%
subject length: 121   Length of aligned reigon: 78
Coverage over query: 47-124   Coverage over subject: 1-80
COG0099, RpsM Ribosomal protein S13 [Translation, ribosomal structure and biogenesis]