Psyllid ID: psy10031

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------22
Protein Sequence
MSWSLEFSFIQVGTEAREEYISRFLEGTIGKVTWEDVLKNNQVKIIDMTDQLSEGPLATLPKGGPPIHIAQEKADQIGYMPLRDDFEWQYDNNAESVVSGLIHLEDTDVDTTLKLVHVDMYINKLRERARRKRVVKDFQLIPKFFNAQLNPETKTVKRKFNKDDSPENGAVVNVLDFGSGGWWFKFKSKSSHKIYQVMIILVRSYLSSSSETLETVND
Secondary Structure (PSIPRED)
cccHHHHHHHHHcHHHHHHHHHHHHcccccccccHHHHHHcccccccccccccccccccccccccccccccHHHHHHccccccccccccccccHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHccccccHHHHHHHccccccccHHHHHHHHHccccHHHHHHHcHHHHHHHHHHHHHHHHHHHccHHccccccc
Secondary Structure Prediction (SSPRO)
ccHHHEHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHcccccccccHHHcccHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHccHHHHHHHHHHcccccHccccEEEEEccccccEEEEEccccHHHHHEEEEccccEEEEEEccEEEEccc
Coil and Loop (DISEMBL)
MSWSLEFSFIQVGTEAREEYISRFLEgtigkvtwEDVLKNNQVKIIdmtdqlsegplatlpkggppihiaqekadqigymplrddfewqydnnaeSVVSGLIHledtdvdttLKLVHVDMYINKLRERARRKRVVKDFQLIPKFfnaqlnpetktvkrkfnkddspengavvnvldfgsggwwfkfksksshKIYQVMIILVRSYLSsssetletvnd
Flexible Loop (DISEMBL)
MSWSLEFSFIQVGTEAREEYISRFLegtigkvtwedVLKNNQVKIIDMTDQLSEGPLATLPKGGPPIHIAQEKADQIGYMPLRDDFEWQYDNNAESVVSGLIHLEdtdvdttlklvHVDMYINklrerarrkrvvKDFQlipkffnaqlnpetktvkrkfnkddspengavvnvldfgsgGWWFKFKSKSSHKIYQVMIILVRSylssssetletvnd
Low Complexity Region (SEG)
MSWSLEFSFIQVGTEAREEYISRFLEGTIGKVTWEDVLKNNQVKIIDMTDQLSEGPLATLPKGGPPIHIAQEKADQIGYMPLRDDFEWQYDNNAESVVSGLIHLEDTDVDTTLKLVHVDMYINKLRERARRKRVVKDFQLIPKFFNAQLNPETKTVKRKFNKDDSPENGAVVNVLDfgsggwwfkfkskssHKIYQVMIILVRSYlssssetletVND
Disordered region (IsUnstruct)
***SLEFSFIQVGTEAREEYISRFLEGTIGKVTWEDVLKNNQVKIIDMTDQL*************PIHIAQEKADQIGYMPLRDDFEWQYDNNAESVVSGLIHLEDTDVDTTLKLVHVDMYINKLRERARRKRVVKDFQLIPKFFNAQL*******************GAVVNVLDFGSGGWWFKFKSKSSHKIYQVMIILVRSYL************
Disordered Region (DISOPRED)
MSWSLEFSFIQVGTEAREEYISRFLEGTIGKVT*******************************************IGYMPLRDDFEWQYDNNAESVVSGLIHLEDTDVDTTLKLVHVDMYINKLRERARRKRVVKDFQLIPKF**********************ENGAVVNVLDFGSGGWWFKFKSKSSHKIYQVMIILVRSYLSSSSETL*****
Disordered Region (DISEMBL)
MSWSLEFSFIQVGTEAREEYISRFLEGTIGKVTWEDVLKNNQVKIIDMTDQLSEGPLATLPKGGPPIHIAQEKADQIGYMPLRDDFEWQYDNNAESVVSGLIHLEDTDVDTTLKLVHVDMYINKLRERARRKRVVKDFQLIPKFFNAQLNPETKTVKRKFNKDDSPENGAVVNVLDFGSGGWWFKFKSKSSHKIYQVMIILVRSYL************
Disordered Region (DISPRO)
*SWSLEFSFIQVGTEAREEYISRFLEGTIGKVTWE*****************SEGPLATLPKGGPPIHIAQEKADQIGYMPLRDDFEWQYDNNAESVVSGLIHLEDTDVDTTLKLVHVDMYINKLRERARRKRVVKDFQLIPKFFNAQLNPETKTVKRKFNKDDSPENGAVVNVLDFGSGGWWFKFKSKSSHKIYQVMIILVRSYLSSSSETLETVN*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSWSLEFSFIQVGTEAREEYISRFLEGTIGKVTWEDVLKNNQVKIIDMTDQLSEGPLATLPKGGPPIHIAQEKADQIGYMPLRDDFEWQYDNNAESVVSGLIHLEDTDVDTTLKLVHVDMYINKLRERARRKRVVKDFQLIPKFFNAQLNPETKTVKRKFNKDDSPENGAVVNVLDFGSGGWWFKFKSKSSHKIYQVMIILVRSYLSSSSETLETVND
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	218	2.2.26 [Sep-21-2011]
Q5RBN9	420	Transcriptional adapter 2	yes	N/A	0.669	0.347	0.407	2e-27
Q86TJ2	420	Transcriptional adapter 2	yes	N/A	0.669	0.347	0.407	2e-27
Q503N9	486	Transcriptional adapter 2	yes	N/A	0.582	0.261	0.413	9e-24
Q6NRB5	420	Transcriptional adapter 2	N/A	N/A	0.674	0.35	0.372	1e-23
Q8I8V0	555	Transcriptional adapter 2	yes	N/A	0.596	0.234	0.473	8e-23
Q3SZP8	443	Transcriptional adapter 2	no	N/A	0.577	0.284	0.294	6e-08
O75478	443	Transcriptional adapter 2	no	N/A	0.577	0.284	0.294	7e-08
Q6AYE3	443	Transcriptional adapter 2	no	N/A	0.591	0.291	0.293	1e-07
Q8CHV6	443	Transcriptional adapter 2	no	N/A	0.307	0.151	0.411	2e-07
Q02336	434	Transcriptional adapter 2	yes	N/A	0.545	0.274	0.275	0.0003

>sp|Q5RBN9|TAD2B_PONAB Transcriptional adapter 2-beta OS=Pongo abelii GN=TADA2B PE=2 SV=1

 Score =  122 bits (305), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 62/152 (40%), Positives = 95/152 (62%), Gaps = 6/152 (3%)

Query: 15  EAREEYISRFLEGTIGKVTWEDVLKNNQVKIIDMTDQLSEGPLA-TLPKGGPPIHIAQEK 73
           E  E Y+S ++ G +GK    D + N   ++ D T   S GPL+ +L    PP+ I+  +
Sbjct: 105 EVMEHYVSMYIHGNLGKACIPDTIPN---RVTDHTCP-SGGPLSPSLTTPLPPLDISVAE 160

Query: 74  ADQIGYMPLRDDFEWQYDNNAESVVSGL-IHLEDTDVDTTLKLVHVDMYINKLRERARRK 132
             Q+GYMPLRDD+E +YD +AE+++SGL ++ +D DV+  LK  HVDMY+ KL+ER RRK
Sbjct: 161 QQQLGYMPLRDDYEIEYDQDAETLISGLSVNYDDDDVEIELKRAHVDMYVRKLKERQRRK 220

Query: 133 RVVKDFQLIPKFFNAQLNPETKTVKRKFNKDD 164
            + +D+ L+P F       + K +KRK  K++
Sbjct: 221 NIARDYNLVPAFLGKDKKEKEKALKRKITKEE 252

Coactivates PAX5-dependent transcription together with either SMARCA4 or GCN5L2.
Pongo abelii (taxid: 9601)

>sp|Q86TJ2|TAD2B_HUMAN Transcriptional adapter 2-beta OS=Homo sapiens GN=TADA2B PE=1 SV=2

 Score =  122 bits (305), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 62/152 (40%), Positives = 95/152 (62%), Gaps = 6/152 (3%)

Query: 15  EAREEYISRFLEGTIGKVTWEDVLKNNQVKIIDMTDQLSEGPLA-TLPKGGPPIHIAQEK 73
           E  E Y+S ++ G +GK    D + N   ++ D T   S GPL+ +L    PP+ I+  +
Sbjct: 105 EVMEHYVSMYIHGNLGKACIPDTIPN---RVTDHTCP-SGGPLSPSLTTPLPPLDISVAE 160

Query: 74  ADQIGYMPLRDDFEWQYDNNAESVVSGL-IHLEDTDVDTTLKLVHVDMYINKLRERARRK 132
             Q+GYMPLRDD+E +YD +AE+++SGL ++ +D DV+  LK  HVDMY+ KL+ER RRK
Sbjct: 161 QQQLGYMPLRDDYEIEYDQDAETLISGLSVNYDDDDVEIELKRAHVDMYVRKLKERQRRK 220

Query: 133 RVVKDFQLIPKFFNAQLNPETKTVKRKFNKDD 164
            + +D+ L+P F       + K +KRK  K++
Sbjct: 221 NIARDYNLVPAFLGKDKKEKEKALKRKITKEE 252

Coactivates PAX5-dependent transcription together with either SMARCA4 or GCN5L2.

Homo sapiens (taxid: 9606)

>sp|Q503N9|TAD2B_DANRE Transcriptional adapter 2-beta OS=Danio rerio GN=tada2b PE=2 SV=1

 Score =  110 bits (274), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 55/133 (41%), Positives = 83/133 (62%), Gaps = 6/133 (4%)

Query: 15  EAREEYISRFLEGTIGKVTWEDVLKNNQVKIIDMTDQLSEGPLA-TLPKGGPPIHIAQEK 73
           E  + Y+S ++ G +GK    D + N   ++ D T   S GPL+ +L    PP+ I   +
Sbjct: 105 EVMDHYVSMYIHGNLGKACIPDSIPN---RVTDHTCP-SGGPLSPSLTTPLPPLDITVVE 160

Query: 74  ADQIGYMPLRDDFEWQYDNNAESVVSGL-IHLEDTDVDTTLKLVHVDMYINKLRERARRK 132
             Q+GYMPLRDD+E +YD  AE ++SGL ++ +D D++  +K  HVDMY+ KLRER RRK
Sbjct: 161 QQQLGYMPLRDDYEIEYDQEAEKLISGLSVNYDDEDIEIEMKRAHVDMYVRKLRERQRRK 220

Query: 133 RVVKDFQLIPKFF 145
            + +D+ L+P F 
Sbjct: 221 NIARDYNLVPAFL 233

Transcriptional coactivator.

Danio rerio (taxid: 7955)

>sp|Q6NRB5|TAD2B_XENLA Transcriptional adapter 2-beta OS=Xenopus laevis GN=tada2b PE=2 SV=1

 Score =  109 bits (273), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 91/153 (59%), Gaps = 6/153 (3%)

Query: 14  TEAREEYISRFLEGTIGKVTWEDVLKNNQVKIIDMTDQLSEGPLA-TLPKGGPPIHIAQE 72
           TE  E Y++ ++ G +GK    D + N   ++ D T     GPL+ +L    P + +   
Sbjct: 104 TEVMEHYVTMYIHGNLGKACIPDSIPN---RVTDHTCPTG-GPLSPSLTTPLPTLDLTVA 159

Query: 73  KADQIGYMPLRDDFEWQYDNNAESVVSGL-IHLEDTDVDTTLKLVHVDMYINKLRERARR 131
              Q+GYMPLRDD+E ++D  AE+++SGL ++ +D DV+  LK  +VDMY+ KL+ER RR
Sbjct: 160 DQQQLGYMPLRDDYEIEFDQEAETLISGLSVNYDDDDVEVELKEAYVDMYVRKLKERQRR 219

Query: 132 KRVVKDFQLIPKFFNAQLNPETKTVKRKFNKDD 164
           K + +D+ L+P F       + K  KRK +K++
Sbjct: 220 KSLARDYNLVPAFLGKDKKEKEKPAKRKISKEE 252

Transcriptional coactivator.

Xenopus laevis (taxid: 8355)

>sp|Q8I8V0|TAD2B_DROME Transcriptional adapter 2B OS=Drosophila melanogaster GN=Ada2b PE=1 SV=1

 Score =  107 bits (266), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 63/133 (47%), Positives = 91/133 (68%), Gaps = 3/133 (2%)

Query: 15  EAREEYISRFLEGTIGKVTWEDVLKNNQVKIIDMTDQLSEGPLATLPKGG-PPIHIAQEK 73
           +A+EEY+++F+ GTIG+ TW    ++ + ++ID T     GPL T      PP+ I  ++
Sbjct: 108 DAKEEYVNKFVNGTIGRATWTPA-QSQRPRLIDHTGDDDAGPLGTNALSTLPPLEINSDE 166

Query: 74  ADQIGYMPLRDDFEWQYDNNAESVVSGL-IHLEDTDVDTTLKLVHVDMYINKLRERARRK 132
           A Q+GYMP RD FE +YD  AE ++S + +  EDT+VD  LKL HVD+Y  +LRERARRK
Sbjct: 167 AMQLGYMPNRDSFEREYDPTAEQLISNISLSSEDTEVDVMLKLAHVDIYTRRLRERARRK 226

Query: 133 RVVKDFQLIPKFF 145
           R+V+D+QL+  FF
Sbjct: 227 RMVRDYQLVSNFF 239

Required for the function of some acidic activation domains, which activate transcription from a distant site. Binds double-stranded DNA. Binds dinucleosomes, probably at the linker region between neighboring nucleosomes. Plays a role in chromatin remodeling.

Drosophila melanogaster (taxid: 7227)

>sp|Q3SZP8|TAD2A_BOVIN Transcriptional adapter 2-alpha OS=Bos taurus GN=TADA2A PE=2 SV=1

 Score = 57.8 bits (138), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 69/136 (50%), Gaps = 10/136 (7%)

Query: 11  QVGTEAREE----YISRFLEGTIGKVTWEDVLKNNQVKIIDMTDQLSEGPLATLPKGGPP 66
           Q+ T+ +EE    Y+  F+   +   T  ++ +  + K  D     +  P  +      P
Sbjct: 101 QMCTKTKEECEKHYMKHFINNPLFASTLLNLKQAEEAKTAD-----TAIPFHSADDPPRP 155

Query: 67  IHIAQEKADQIGYMPLRDDFEWQYDNNAESVVSGLIHLED-TDVDTTLKLVHVDMYINKL 125
              +    D  GYMP R DF  ++DN AE  +  +  +ED +D+   LK+  VD+Y ++L
Sbjct: 156 TFDSLLSRDMAGYMPARADFIEEFDNYAEWDLRDIDFVEDDSDILHALKMAVVDIYHSRL 215

Query: 126 RERARRKRVVKDFQLI 141
           +ER RRK++++D  LI
Sbjct: 216 KERQRRKKIIRDHGLI 231

Component of the ATAC complex, a complex with histone acetyltransferase activity on histones H3 and H4. Required for the function of some acidic activation domains, which activate transcription from a distant site (By similarity). Binds double-stranded DNA. Binds dinucleosomes, probably at the linker region between neighboring nucleosomes. Plays a role in chromatin remodeling.

Bos taurus (taxid: 9913)

>sp|O75478|TAD2A_HUMAN Transcriptional adapter 2-alpha OS=Homo sapiens GN=TADA2A PE=1 SV=3

 Score = 57.4 bits (137), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 69/136 (50%), Gaps = 10/136 (7%)

Query: 11  QVGTEAREE----YISRFLEGTIGKVTWEDVLKNNQVKIIDMTDQLSEGPLATLPKGGPP 66
           Q+ T+ +EE    Y+  F+   +   T  ++ +  + K  D     +  P  +      P
Sbjct: 101 QMCTKTKEECEKHYMKHFINNPLFASTLLNLKQAEEAKTAD-----TAIPFHSTDDPPRP 155

Query: 67  IHIAQEKADQIGYMPLRDDFEWQYDNNAESVVSGLIHLED-TDVDTTLKLVHVDMYINKL 125
              +    D  GYMP R DF  ++DN AE  +  +  +ED +D+   LK+  VD+Y ++L
Sbjct: 156 TFDSLLSRDMAGYMPARADFIEEFDNYAEWDLRDIDFVEDDSDILHALKMAVVDIYHSRL 215

Query: 126 RERARRKRVVKDFQLI 141
           +ER RRK++++D  LI
Sbjct: 216 KERQRRKKIIRDHGLI 231

Component of the ATAC complex, a complex with histone acetyltransferase activity on histones H3 and H4. Required for the function of some acidic activation domains, which activate transcription from a distant site (By similarity). Binds double-stranded DNA. Binds dinucleosomes, probably at the linker region between neighboring nucleosomes. Plays a role in chromatin remodeling.

Homo sapiens (taxid: 9606)

>sp|Q6AYE3|TAD2A_RAT Transcriptional adapter 2-alpha OS=Rattus norvegicus GN=Tada2a PE=2 SV=1

 Score = 56.2 bits (134), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 67/133 (50%), Gaps = 4/133 (3%)

Query: 11  QVGTEAREEYISRFLEGTIGKVTWEDVLKN-NQVKIIDMTDQLSEGPLATLPKGGPPIHI 69
           Q+ T+ +EE    +++  I    +   L N  Q +     D  +  P  +      P   
Sbjct: 101 QMCTKTKEECEKHYMKHFINNPLFASTLLNLKQAEAAKTAD--TAIPFHSADDPPRPAFD 158

Query: 70  AQEKADQIGYMPLRDDFEWQYDNNAESVVSGLIHLED-TDVDTTLKLVHVDMYINKLRER 128
           +    D  GYMP R DF  ++DN AE  +  +  +ED +D+   LK+  VD+Y ++L+ER
Sbjct: 159 SLLSRDMAGYMPARADFIEEFDNYAEWDLRDIDFVEDDSDILHALKMAVVDIYHSRLKER 218

Query: 129 ARRKRVVKDFQLI 141
            RRK++++D  L+
Sbjct: 219 QRRKKIIRDHGLV 231

Component of the ATAC complex, a complex with histone acetyltransferase activity on histones H3 and H4. Required for the function of some acidic activation domains, which activate transcription from a distant site (By similarity). Binds double-stranded DNA. Binds dinucleosomes, probably at the linker region between neighboring nucleosomes. Plays a role in chromatin remodeling.

Rattus norvegicus (taxid: 10116)

>sp|Q8CHV6|TAD2A_MOUSE Transcriptional adapter 2-alpha OS=Mus musculus GN=Tada2a PE=1 SV=1

 Score = 55.8 bits (133), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 45/68 (66%), Gaps = 1/68 (1%)

Query: 75  DQIGYMPLRDDFEWQYDNNAESVVSGLIHLED-TDVDTTLKLVHVDMYINKLRERARRKR 133
           D  GYMP R DF  ++DN AE  +  +  +ED +D+   LK+  VD+Y ++L+ER RRK+
Sbjct: 164 DMAGYMPARADFIEEFDNYAEWDLRDIDFVEDDSDILHALKMAVVDIYHSRLKERQRRKK 223

Query: 134 VVKDFQLI 141
           +++D  L+
Sbjct: 224 IIRDHGLV 231

Component of the ATAC complex, a complex with histone acetyltransferase activity on histones H3 and H4. Required for the function of some acidic activation domains, which activate transcription from a distant site (By similarity). Binds double-stranded DNA. Binds dinucleosomes, probably at the linker region between neighboring nucleosomes. Plays a role in chromatin remodeling.

Mus musculus (taxid: 10090)

>sp|Q02336|ADA2_YEAST Transcriptional adapter 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ADA2 PE=1 SV=1

 Score = 45.4 bits (106), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 19/138 (13%)

Query: 15  EAREEYISRFLEGTIGKVTWEDVLKNNQVKIIDMTDQ-------LSEGPLATLPK---GG 64
           E +E Y+  +LE     +   D+ +N  V   +  +Q         E PL    K     
Sbjct: 99  EVKEHYLKYYLESKYYPIP--DITQNIHVPQDEFLEQRRHRIESFRERPLEPPRKPMASV 156

Query: 65  PPIHIAQEKADQIGYMPLRDDFEWQYDNNAESVVSGLI-HLEDTDVDTTLKLVHVDMYIN 123
           P  H  Q      G+MP R +FE +++N AE  V  ++   +D  +D  LK   +D+Y +
Sbjct: 157 PSCHEVQ------GFMPGRLEFETEFENEAEGPVKDMVFEPDDQPLDIELKFAILDIYNS 210

Query: 124 KLRERARRKRVVKDFQLI 141
           +L  RA +KR++ +  L+
Sbjct: 211 RLTTRAEKKRLLFENHLM 228

Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation of approximately 10% of yeast genes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction (SPT3, SPT8 and SPT20) and promoter selectivity, interaction with transcription activators (GCN5, ADA2, ADA3 and TRA1), and chromatin modification through histone acetylation (GCN5) and deubiquitination (UBP8). SAGA acetylates nucleosomal histone H3 to some extent (to form H3K9ac, H3K14ac, H3K18ac and H3K23ac). SAGA interacts with DNA via upstream activating sequences (UASs). SALSA, an altered form of SAGA, may be involved in positive transcriptional regulation. SLIK is proposed to have partly overlapping functions with SAGA. It preferentially acetylates methylated histone H3, at least after activation at the GAL1-10 locus. ADA preferentially acetylates nucleosomal histones H3 (to form H3K14ac and H3K18ac) and H2B.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	218
345489503	642	PREDICTED: transcriptional adapter 2B-li	0.660	0.224	0.483	2e-29
380011537	634	PREDICTED: transcriptional adapter 2B-li	0.591	0.203	0.529	2e-28
307181003	594	Transcriptional adapter 2B [Camponotus f	0.582	0.213	0.514	2e-28
332030578	523	Transcriptional adapter 2B [Acromyrmex e	0.582	0.242	0.522	2e-28
307191574	561	Transcriptional adapter 2B [Harpegnathos	0.582	0.226	0.514	2e-28
383849195	609	PREDICTED: transcriptional adapter 2B-li	0.591	0.211	0.514	3e-28
431897265	328	Transcriptional adapter 2-beta [Pteropus	0.669	0.445	0.421	1e-26
417410533	418	Putative transcriptional adapter 2-beta-	0.669	0.349	0.421	2e-26
354468440	328	PREDICTED: transcriptional adapter 2-bet	0.669	0.445	0.414	3e-26
281427139	420	transcriptional adaptor 2B [Rattus norve	0.669	0.347	0.414	3e-26

>gi|345489503|ref|XP_001604386.2| PREDICTED: transcriptional adapter 2B-like [Nasonia vitripennis]

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 75/155 (48%), Positives = 102/155 (65%), Gaps = 11/155 (7%)

Query: 15  EAREEYISRFLEGTIGKVTWEDVLKNNQVKIIDMTDQ--LSEGPLAT-LPKGGPPIHIAQ 71
           EA++EYI+R+L+G IGK TW  +    +    ++TD   L  GPL+  L    PP+ I  
Sbjct: 103 EAKDEYIARYLDGNIGKFTWPSI----ETYSPNLTDHTTLDHGPLSPDLTSRLPPLDITP 158

Query: 72  EKADQIGYMPLRDDFEWQYDNNAESVVSGLI--HLEDTDVDTTLKLVHVDMYINKLRERA 129
           ++A Q+GYMP RDDFE  Y++ AES+VS L     ED D+D  LKL  VDMY N LRERA
Sbjct: 159 DEATQLGYMPQRDDFERDYNHEAESLVSSLFLNPAEDDDLDIALKLAQVDMYTNNLRERA 218

Query: 130 RRKRVVKDFQLIPKFFNAQLNPETKTVKRKFNKDD 164
           RRKRVV+D+QL+  FF+A  + + K VK+K  K++
Sbjct: 219 RRKRVVRDYQLVSAFFSA--SRKEKGVKKKQTKEE 251

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380011537|ref|XP_003689858.1| PREDICTED: transcriptional adapter 2B-like [Apis florea]

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 71/134 (52%), Positives = 90/134 (67%), Gaps = 5/134 (3%)

Query: 15  EAREEYISRFLEGTIGKVTWEDVLKNNQVKIIDMTDQLSEGPLAT-LPKGGPPIHIAQEK 73
           EA+EEYI+R+L+G IGK TW    ++ +  I D T +   GPL+  L    PP+ I  E+
Sbjct: 109 EAKEEYIARYLDGNIGKHTWPPT-ESYKPNITDQT-KSDHGPLSPDLTSRLPPLDITPEE 166

Query: 74  ADQIGYMPLRDDFEWQYDNNAESVVSGLI--HLEDTDVDTTLKLVHVDMYINKLRERARR 131
           A Q+GYMP RDDFE  Y++ AES+VS L     ED D+D  LKL  VDMY N LRERARR
Sbjct: 167 AAQLGYMPQRDDFERDYNHEAESLVSSLFLNPAEDDDLDIALKLAQVDMYTNNLRERARR 226

Query: 132 KRVVKDFQLIPKFF 145
           KRVV+D+QL+  FF
Sbjct: 227 KRVVRDYQLVSAFF 240

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307181003|gb|EFN68777.1| Transcriptional adapter 2B [Camponotus floridanus]

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 70/136 (51%), Positives = 89/136 (65%), Gaps = 9/136 (6%)

Query: 15  EAREEYISRFLEGTIGKVTWEDVLKNNQVKIIDMTDQLS--EGPLAT-LPKGGPPIHIAQ 71
           EA++EYI+R+L G IGK TW       +  + ++TDQ     GPL+  L    PP+ I  
Sbjct: 103 EAKDEYIARYLNGNIGKHTWPPT----ESYVPNLTDQTKSDHGPLSPDLTSKLPPLDITP 158

Query: 72  EKADQIGYMPLRDDFEWQYDNNAESVVSGLI--HLEDTDVDTTLKLVHVDMYINKLRERA 129
           E+A Q+GYMP RDDFE  Y++ AES+VS L     ED D+D  LKL  VDMY N LRERA
Sbjct: 159 EEATQLGYMPQRDDFERDYNHEAESLVSSLFLNPAEDDDLDIALKLAQVDMYTNNLRERA 218

Query: 130 RRKRVVKDFQLIPKFF 145
           RRKRVV+D+QL+  FF
Sbjct: 219 RRKRVVRDYQLVSAFF 234

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332030578|gb|EGI70266.1| Transcriptional adapter 2B [Acromyrmex echinatior]

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 71/136 (52%), Positives = 88/136 (64%), Gaps = 9/136 (6%)

Query: 15  EAREEYISRFLEGTIGKVTWEDVLKNNQVKIIDMTDQLS--EGPLAT-LPKGGPPIHIAQ 71
           EA+EEYI+R+L G IGK TW          + ++TDQ     GPL+  L    PP+ I  
Sbjct: 103 EAKEEYIARYLNGNIGKHTWPPT----DSYVPNLTDQTKSDHGPLSPDLTSKLPPLDITP 158

Query: 72  EKADQIGYMPLRDDFEWQYDNNAESVVSGLI--HLEDTDVDTTLKLVHVDMYINKLRERA 129
           E+A Q+GYMP RDDFE  Y++ AES+VS L     ED D+D  LKL  VDMY N LRERA
Sbjct: 159 EEAAQLGYMPQRDDFERDYNHEAESLVSSLFLNPAEDDDLDIALKLAQVDMYTNNLRERA 218

Query: 130 RRKRVVKDFQLIPKFF 145
           RRKRVV+D+QL+  FF
Sbjct: 219 RRKRVVRDYQLVSAFF 234

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307191574|gb|EFN75072.1| Transcriptional adapter 2B [Harpegnathos saltator]

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 70/136 (51%), Positives = 89/136 (65%), Gaps = 9/136 (6%)

Query: 15  EAREEYISRFLEGTIGKVTWEDVLKNNQVKIIDMTDQLS--EGPLAT-LPKGGPPIHIAQ 71
           EA+EEYI+R+L G IGK TW       +  + ++TDQ     GPL+  L    PP+ I  
Sbjct: 158 EAKEEYIARYLNGNIGKHTWPPT----ESYVPNLTDQTKSDHGPLSPDLTSRLPPLDITP 213

Query: 72  EKADQIGYMPLRDDFEWQYDNNAESVVSGLI--HLEDTDVDTTLKLVHVDMYINKLRERA 129
           ++A Q+GYMP RDDFE  Y++ AES+VS L     ED D+D  LKL  VDMY N LRERA
Sbjct: 214 DEAAQLGYMPQRDDFERDYNHEAESLVSSLFLNPAEDDDLDIALKLAQVDMYTNNLRERA 273

Query: 130 RRKRVVKDFQLIPKFF 145
           RRKRVV+D+QL+  FF
Sbjct: 274 RRKRVVRDYQLVSTFF 289

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383849195|ref|XP_003700231.1| PREDICTED: transcriptional adapter 2B-like [Megachile rotundata]

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 71/138 (51%), Positives = 91/138 (65%), Gaps = 9/138 (6%)

Query: 15  EAREEYISRFLEGTIGKVTWEDVLKNNQVKIIDMTDQLS--EGPLAT-LPKGGPPIHIAQ 71
           EA+EEYI+R+L+G IGK TW       +    ++TDQ     GPL+  L    PP+ I  
Sbjct: 109 EAKEEYIARYLDGNIGKHTWPPT----ESYKPNLTDQTKSDHGPLSPDLTSRLPPLDITP 164

Query: 72  EKADQIGYMPLRDDFEWQYDNNAESVVSGLI--HLEDTDVDTTLKLVHVDMYINKLRERA 129
           E+A Q+GYMP RDDFE  Y++ AES+VS L     ED D+D  LKL  VDMY N LRERA
Sbjct: 165 EEAAQLGYMPQRDDFERDYNHEAESLVSSLFLNPAEDDDLDIALKLAQVDMYTNNLRERA 224

Query: 130 RRKRVVKDFQLIPKFFNA 147
           RRKRVV+D+QL+  FF++
Sbjct: 225 RRKRVVRDYQLVSAFFSS 242

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|431897265|gb|ELK06527.1| Transcriptional adapter 2-beta [Pteropus alecto]

 Score =  125 bits (313), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 64/152 (42%), Positives = 95/152 (62%), Gaps = 6/152 (3%)

Query: 15  EAREEYISRFLEGTIGKVTWEDVLKNNQVKIIDMTDQLSEGPLA-TLPKGGPPIHIAQEK 73
           E  E Y+S ++ G +GK    D + N   ++ D T   S GPL+ +L    PP+ I+  +
Sbjct: 13  EVMEHYVSMYIHGNLGKACIPDTIPN---RVTDHTCP-SGGPLSPSLTTPLPPLDISVAE 68

Query: 74  ADQIGYMPLRDDFEWQYDNNAESVVSGL-IHLEDTDVDTTLKLVHVDMYINKLRERARRK 132
             Q+GYMPLRDD+E +YD +AE+++SGL ++ +D DV+  LK  HVDMY+ KLRER RRK
Sbjct: 69  QQQLGYMPLRDDYEIEYDQDAETLISGLSVNYDDDDVEIELKRAHVDMYVRKLRERQRRK 128

Query: 133 RVVKDFQLIPKFFNAQLNPETKTVKRKFNKDD 164
            + +D+ L+P F       + KT KRK  K++
Sbjct: 129 NIARDYNLVPAFLGRDKKEKEKTAKRKITKEE 160

Source: Pteropus alecto

Species: Pteropus alecto

Genus: Pteropus

Family: Pteropodidae

Order: Chiroptera

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|417410533|gb|JAA51738.1| Putative transcriptional adapter 2-beta-like protein, partial [Desmodus rotundus]

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 64/152 (42%), Positives = 94/152 (61%), Gaps = 6/152 (3%)

Query: 15  EAREEYISRFLEGTIGKVTWEDVLKNNQVKIIDMTDQLSEGPLA-TLPKGGPPIHIAQEK 73
           E  E Y+S ++ G +GK    D + N   ++ D T   S GPL+ +L    PP+ I+  +
Sbjct: 103 EVMEHYVSMYIHGNLGKACIPDTIPN---RVTDHTCP-SGGPLSPSLTTPLPPLDISVAE 158

Query: 74  ADQIGYMPLRDDFEWQYDNNAESVVSGL-IHLEDTDVDTTLKLVHVDMYINKLRERARRK 132
             Q+GYMPLRDD+E +YD +AE+++SGL ++ +D DV+  LK  HVDMY+ KLRER RRK
Sbjct: 159 QQQLGYMPLRDDYEIEYDQDAETLISGLSVNYDDDDVEIELKRAHVDMYVRKLRERQRRK 218

Query: 133 RVVKDFQLIPKFFNAQLNPETKTVKRKFNKDD 164
            + +D+ L+P F         KT KRK  K++
Sbjct: 219 NIARDYNLVPAFLGKDKKDREKTAKRKITKEE 250

Source: Desmodus rotundus

Species: Desmodus rotundus

Genus: Desmodus

Family: Phyllostomidae

Order: Chiroptera

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|354468440|ref|XP_003496661.1| PREDICTED: transcriptional adapter 2-beta-like [Cricetulus griseus] gi|344235502|gb|EGV91605.1| Transcriptional adapter 2-beta [Cricetulus griseus]

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 63/152 (41%), Positives = 96/152 (63%), Gaps = 6/152 (3%)

Query: 15  EAREEYISRFLEGTIGKVTWEDVLKNNQVKIIDMTDQLSEGPLA-TLPKGGPPIHIAQEK 73
           E  E Y+S ++ G +GK    D + N   ++ D T   S GPL+ +L    PP+ I+  +
Sbjct: 13  EVMEHYVSMYIHGNLGKACIPDTIPN---RVTDHTCP-SGGPLSPSLTTPLPPLDISVAE 68

Query: 74  ADQIGYMPLRDDFEWQYDNNAESVVSGL-IHLEDTDVDTTLKLVHVDMYINKLRERARRK 132
             Q+GYMPLRDD+E +YD +AE+++SGL ++ +D DV+  LK  HVDMY+ KL+ER RRK
Sbjct: 69  QQQLGYMPLRDDYEIEYDQDAETLISGLSVNYDDDDVEIELKRAHVDMYVRKLKERQRRK 128

Query: 133 RVVKDFQLIPKFFNAQLNPETKTVKRKFNKDD 164
            + +D+ L+P F       + KT+KRK  K++
Sbjct: 129 NIARDYNLVPAFLGKDKKEKEKTLKRKITKEE 160

Source: Cricetulus griseus

Species: Cricetulus griseus

Genus: Cricetulus

Family: Cricetidae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|281427139|ref|NP_001163926.1| transcriptional adaptor 2B [Rattus norvegicus] gi|298676444|ref|NP_001163925.1| transcriptional adaptor 2B [Mus musculus] gi|148705559|gb|EDL37506.1| mCG49644 [Mus musculus] gi|149047376|gb|EDM00046.1| similar to hypothetical protein (predicted) [Rattus norvegicus] gi|197246513|gb|AAI69109.1| Tada2b protein [Rattus norvegicus]

 Score =  124 bits (310), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 63/152 (41%), Positives = 96/152 (63%), Gaps = 6/152 (3%)

Query: 15  EAREEYISRFLEGTIGKVTWEDVLKNNQVKIIDMTDQLSEGPLA-TLPKGGPPIHIAQEK 73
           E  E Y+S ++ G +GK    D + N   ++ D T   S GPL+ +L    PP+ I+  +
Sbjct: 105 EVMEHYVSMYIHGNLGKACIPDTIPN---RVTDHTCP-SGGPLSPSLTTPLPPLDISVAE 160

Query: 74  ADQIGYMPLRDDFEWQYDNNAESVVSGL-IHLEDTDVDTTLKLVHVDMYINKLRERARRK 132
             Q+GYMPLRDD+E +YD +AE+++SGL ++ +D DV+  LK  HVDMY+ KL+ER RRK
Sbjct: 161 QQQLGYMPLRDDYEIEYDQDAETLISGLSVNYDDDDVEIELKRAHVDMYVRKLKERQRRK 220

Query: 133 RVVKDFQLIPKFFNAQLNPETKTVKRKFNKDD 164
            + +D+ L+P F       + KT+KRK  K++
Sbjct: 221 NIARDYNLVPAFLGKDKKEKEKTLKRKITKEE 252

Source: Rattus norvegicus

Species: Rattus norvegicus

Genus: Rattus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	218
FB|FBgn0037555	555	Ada2b "transcriptional Adaptor	0.596	0.234	0.473	1.2e-28
RGD|1561605	420	Tada2b "transcriptional adapto	0.669	0.347	0.414	1.5e-28
UNIPROTKB|F1N9A7	330	TADA2B "Uncharacterized protei	0.669	0.442	0.414	3.1e-28
UNIPROTKB|Q86TJ2	420	TADA2B "Transcriptional adapte	0.669	0.347	0.407	5e-28
UNIPROTKB|I3LTB2	420	TADA2B "Uncharacterized protei	0.669	0.347	0.407	8.2e-28
UNIPROTKB|G5E6P9	340	G5E6P9 "Uncharacterized protei	0.669	0.429	0.401	1.7e-27
UNIPROTKB|F1P6G2	330	TADA2B "Uncharacterized protei	0.669	0.442	0.394	5.7e-27
ZFIN|ZDB-GENE-050522-557	486	tada2b "transcriptional adapto	0.577	0.259	0.416	8.4e-24
UNIPROTKB|G3MYD1	422	TADA2B "Uncharacterized protei	0.669	0.345	0.375	3.9e-23
UNIPROTKB|D6RJ05	129	TADA2B "Transcriptional adapte	0.522	0.883	0.441	9e-22

FB|FBgn0037555 Ada2b "transcriptional Adaptor 2b" [Drosophila melanogaster (taxid:7227)]

 Score = 324 (119.1 bits), Expect = 1.2e-28, P = 1.2e-28
 Identities = 63/133 (47%), Positives = 91/133 (68%)

Query:    15 EAREEYISRFLEGTIGKVTWEDVLKNNQVKIIDMTDQLSEGPLATLPKGG-PPIHIAQEK 73
             +A+EEY+++F+ GTIG+ TW    ++ + ++ID T     GPL T      PP+ I  ++
Sbjct:   108 DAKEEYVNKFVNGTIGRATWTPA-QSQRPRLIDHTGDDDAGPLGTNALSTLPPLEINSDE 166

Query:    74 ADQIGYMPLRDDFEWQYDNNAESVVSGL-IHLEDTDVDTTLKLVHVDMYINKLRERARRK 132
             A Q+GYMP RD FE +YD  AE ++S + +  EDT+VD  LKL HVD+Y  +LRERARRK
Sbjct:   167 AMQLGYMPNRDSFEREYDPTAEQLISNISLSSEDTEVDVMLKLAHVDIYTRRLRERARRK 226

Query:   133 RVVKDFQLIPKFF 145
             R+V+D+QL+  FF
Sbjct:   227 RMVRDYQLVSNFF 239

GO:0005634 "nucleus" evidence=IDA

GO:0005700 "polytene chromosome" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0006338 "chromatin remodeling" evidence=IDA

GO:0000124 "SAGA complex" evidence=IDA;NAS;IPI

GO:0004402 "histone acetyltransferase activity" evidence=NAS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IDA

GO:0003682 "chromatin binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0035066 "positive regulation of histone acetylation" evidence=IMP

GO:0043966 "histone H3 acetylation" evidence=IMP

GO:0035222 "wing disc pattern formation" evidence=IGI

GO:0007412 "axon target recognition" evidence=IMP

RGD|1561605 Tada2b "transcriptional adaptor 2B" [Rattus norvegicus (taxid:10116)]

 Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
 Identities = 63/152 (41%), Positives = 96/152 (63%)

Query:    15 EAREEYISRFLEGTIGKVTWEDVLKNNQVKIIDMTDQLSEGPLA-TLPKGGPPIHIAQEK 73
             E  E Y+S ++ G +GK    D + N   ++ D T   S GPL+ +L    PP+ I+  +
Sbjct:   105 EVMEHYVSMYIHGNLGKACIPDTIPN---RVTDHTCP-SGGPLSPSLTTPLPPLDISVAE 160

Query:    74 ADQIGYMPLRDDFEWQYDNNAESVVSGL-IHLEDTDVDTTLKLVHVDMYINKLRERARRK 132
               Q+GYMPLRDD+E +YD +AE+++SGL ++ +D DV+  LK  HVDMY+ KL+ER RRK
Sbjct:   161 QQQLGYMPLRDDYEIEYDQDAETLISGLSVNYDDDDVEIELKRAHVDMYVRKLKERQRRK 220

Query:   133 RVVKDFQLIPKFFNAQLNPETKTVKRKFNKDD 164
              + +D+ L+P F       + KT+KRK  K++
Sbjct:   221 NIARDYNLVPAFLGKDKKEKEKTLKRKITKEE 252

GO:0003674 "molecular_function" evidence=ND

GO:0003677 "DNA binding" evidence=IEA

GO:0003682 "chromatin binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

GO:0030914 "STAGA complex" evidence=IEA;ISO

GO:0070461 "SAGA-type complex" evidence=ISO

UNIPROTKB|F1N9A7 TADA2B "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
 Identities = 63/152 (41%), Positives = 95/152 (62%)

Query:    15 EAREEYISRFLEGTIGKVTWEDVLKNNQVKIIDMTDQLSEGPLA-TLPKGGPPIHIAQEK 73
             E  E Y+S ++ G +GK    D + N   ++ D T   S GPL+ +L    PP+ I+  +
Sbjct:    15 EVMEHYVSMYIHGNLGKACIPDTIPN---RVTDHTCP-SGGPLSPSLTTPLPPLDISVAE 70

Query:    74 ADQIGYMPLRDDFEWQYDNNAESVVSGL-IHLEDTDVDTTLKLVHVDMYINKLRERARRK 132
               Q+GYMPLRDD+E +YD +AE+++SGL ++ +D DV+  LK  HVDMY+ KL+ER RRK
Sbjct:    71 QQQLGYMPLRDDYEIEYDQDAETLISGLSVNYDDDDVEIELKRAHVDMYVRKLKERQRRK 130

Query:   133 RVVKDFQLIPKFFNAQLNPETKTVKRKFNKDD 164
              + +D+ L+P F       + KT KRK  K++
Sbjct:   131 NIARDYNLVPAFLGKDKKDKEKTPKRKITKEE 162

GO:0003677 "DNA binding" evidence=IEA

GO:0030914 "STAGA complex" evidence=IEA

UNIPROTKB|Q86TJ2 TADA2B "Transcriptional adapter 2-beta" [Homo sapiens (taxid:9606)]

 Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
 Identities = 62/152 (40%), Positives = 95/152 (62%)

Query:    15 EAREEYISRFLEGTIGKVTWEDVLKNNQVKIIDMTDQLSEGPLA-TLPKGGPPIHIAQEK 73
             E  E Y+S ++ G +GK    D + N   ++ D T   S GPL+ +L    PP+ I+  +
Sbjct:   105 EVMEHYVSMYIHGNLGKACIPDTIPN---RVTDHTCP-SGGPLSPSLTTPLPPLDISVAE 160

Query:    74 ADQIGYMPLRDDFEWQYDNNAESVVSGL-IHLEDTDVDTTLKLVHVDMYINKLRERARRK 132
               Q+GYMPLRDD+E +YD +AE+++SGL ++ +D DV+  LK  HVDMY+ KL+ER RRK
Sbjct:   161 QQQLGYMPLRDDYEIEYDQDAETLISGLSVNYDDDDVEIELKRAHVDMYVRKLKERQRRK 220

Query:   133 RVVKDFQLIPKFFNAQLNPETKTVKRKFNKDD 164
              + +D+ L+P F       + K +KRK  K++
Sbjct:   221 NIARDYNLVPAFLGKDKKEKEKALKRKITKEE 252

GO:0003677 "DNA binding" evidence=IEA

GO:0003682 "chromatin binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0030914 "STAGA complex" evidence=IEA

GO:0070461 "SAGA-type complex" evidence=IDA

UNIPROTKB|I3LTB2 TADA2B "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
 Identities = 62/152 (40%), Positives = 94/152 (61%)

Query:    15 EAREEYISRFLEGTIGKVTWEDVLKNNQVKIIDMTDQLSEGPLA-TLPKGGPPIHIAQEK 73
             E  E Y+S ++ G +GK    D + N   ++ D T   S GPL+ +L    PP+ I+  +
Sbjct:   105 EVMEHYVSMYIHGNLGKACIPDTIPN---RVTDHTCP-SGGPLSPSLTTPLPPLDISVAE 160

Query:    74 ADQIGYMPLRDDFEWQYDNNAESVVSGL-IHLEDTDVDTTLKLVHVDMYINKLRERARRK 132
               Q+GYMPLRDD+E +YD +AE+++SGL ++ +D DV+  LK  HVDMY+ KL+ER RRK
Sbjct:   161 QQQLGYMPLRDDYEIEYDQDAETLISGLSVNYDDDDVEIELKRAHVDMYVRKLKERQRRK 220

Query:   133 RVVKDFQLIPKFFNAQLNPETKTVKRKFNKDD 164
              + +D+ L+P F       + K  KRK  K++
Sbjct:   221 NIARDYNLVPAFLGKDKKEKEKAAKRKVTKEE 252

GO:0030914 "STAGA complex" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003682 "chromatin binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

UNIPROTKB|G5E6P9 G5E6P9 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
 Identities = 61/152 (40%), Positives = 94/152 (61%)

Query:    15 EAREEYISRFLEGTIGKVTWEDVLKNNQVKIIDMTDQLSEGPLA-TLPKGGPPIHIAQEK 73
             E  E Y+S ++ G +GK    D + N   ++ D T   S GPL+ +L    PP+ I+  +
Sbjct:    18 EVMEHYVSMYIHGNLGKACIPDTIPN---RVTDHTCP-SGGPLSPSLTTPLPPLDISVAE 73

Query:    74 ADQIGYMPLRDDFEWQYDNNAESVVSGL-IHLEDTDVDTTLKLVHVDMYINKLRERARRK 132
               Q+GYMPLRDD+E +YD +AE+++SGL ++ +D DV+  LK  HVDMY+ KLRER RRK
Sbjct:    74 QQQLGYMPLRDDYEIEYDQDAETLISGLSVNYDDDDVEIELKRAHVDMYVRKLRERQRRK 133

Query:   133 RVVKDFQLIPKFFNAQLNPETKTVKRKFNKDD 164
              + +D+ L+P F       + +  +RK  K++
Sbjct:   134 NIARDYNLVPAFLGKDKKEKERAARRKVTKEE 165

GO:0003677 "DNA binding" evidence=IEA

UNIPROTKB|F1P6G2 TADA2B "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
 Identities = 60/152 (39%), Positives = 93/152 (61%)

Query:    15 EAREEYISRFLEGTIGKVTWEDVLKNNQVKIIDMTDQLSEGPLA-TLPKGGPPIHIAQEK 73
             E  E Y+S ++ G +G+    D + N   ++ D T     GPL+ +L    PP+ I+  +
Sbjct:    15 EVMEHYVSMYIHGNLGRACIPDTIPN---RVTDHTCP-GGGPLSPSLTTPLPPLDISVAE 70

Query:    74 ADQIGYMPLRDDFEWQYDNNAESVVSGL-IHLEDTDVDTTLKLVHVDMYINKLRERARRK 132
               Q+GYMPLRDD+E +YD +AE+++SGL ++ +D DV+  LK  HVDMY+ KLRER RRK
Sbjct:    71 QQQLGYMPLRDDYEIEYDQDAETLISGLSVNYDDEDVEIELKRAHVDMYVRKLRERQRRK 130

Query:   133 RVVKDFQLIPKFFNAQLNPETKTVKRKFNKDD 164
              + +D+ L+P F       + +  KRK  K++
Sbjct:   131 NIARDYNLVPAFLGKDKKDKERPAKRKVTKEE 162

GO:0030914 "STAGA complex" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

ZFIN|ZDB-GENE-050522-557 tada2b "transcriptional adaptor 2 (ADA2 homolog, yeast)-beta" [Danio rerio (taxid:7955)]

 Score = 278 (102.9 bits), Expect = 8.4e-24, P = 8.4e-24
 Identities = 55/132 (41%), Positives = 83/132 (62%)

Query:    15 EAREEYISRFLEGTIGKVTWEDVLKNNQVKIIDMTDQLSEGPLA-TLPKGGPPIHIAQEK 73
             E  + Y+S ++ G +GK    D + N   ++ D T   S GPL+ +L    PP+ I   +
Sbjct:   105 EVMDHYVSMYIHGNLGKACIPDSIPN---RVTDHTCP-SGGPLSPSLTTPLPPLDITVVE 160

Query:    74 ADQIGYMPLRDDFEWQYDNNAESVVSGL-IHLEDTDVDTTLKLVHVDMYINKLRERARRK 132
               Q+GYMPLRDD+E +YD  AE ++SGL ++ +D D++  +K  HVDMY+ KLRER RRK
Sbjct:   161 QQQLGYMPLRDDYEIEYDQEAEKLISGLSVNYDDEDIEIEMKRAHVDMYVRKLRERQRRK 220

Query:   133 RVVKDFQLIPKF 144
              + +D+ L+P F
Sbjct:   221 NIARDYNLVPAF 232

GO:0003677 "DNA binding" evidence=IEA

GO:0003682 "chromatin binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

UNIPROTKB|G3MYD1 TADA2B "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 269 (99.8 bits), Expect = 3.9e-23, P = 3.9e-23
 Identities = 57/152 (37%), Positives = 90/152 (59%)

Query:    15 EAREEYISRFLEGTIGKVTWEDVLKNNQVKIIDMTDQLSEGPLA-TLPKGGPPIHIAQEK 73
             E  E YI  ++ G +GK    D + N   ++ D T   S GPL+ +L    PP+ I+  +
Sbjct:   105 EVMEHYIIMYIHGNLGKACIPDSIPN---RVTDHTCP-SGGPLSPSLTTPLPPLDISVAE 160

Query:    74 ADQIGYMPLRDDFEWQYDNNAESVVSGL-IHLEDTDVDTTLKLVHVDMYINKLRERARRK 132
               Q+GYM LRD+++ +YD +AE++++GL ++ ++ DV+  LK  HVDMY+ KLRER RRK
Sbjct:   161 QPQLGYMLLRDEYDIEYDQDAETLITGLSVNYDEEDVEIELKRAHVDMYVRKLRERQRRK 220

Query:   133 RVVKDFQLIPKFFNAQLNPETKTVKRKFNKDD 164
              + +D+ L P F       E    +RK  K++
Sbjct:   221 NIAQDYNLAPAFLGKDKKEEEWAAQRKVTKEE 252

GO:0030914 "STAGA complex" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003682 "chromatin binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

UNIPROTKB|D6RJ05 TADA2B "Transcriptional adapter 2-beta" [Homo sapiens (taxid:9606)]

 Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
 Identities = 53/120 (44%), Positives = 78/120 (65%)

Query:    15 EAREEYISRFLEGTIGKVTWEDVLKNNQVKIIDMTDQLSEGPLA-TLPKGGPPIHIAQEK 73
             E  E Y+S ++ G +GK    D + N   ++ D T   S GPL+ +L    PP+ I+  +
Sbjct:    13 EVMEHYVSMYIHGNLGKACIPDTIPN---RVTDHTCP-SGGPLSPSLTTPLPPLDISVAE 68

Query:    74 ADQIGYMPLRDDFEWQYDNNAESVVSGL-IHLEDTDVDTTLKLVHVDMYINKLRERARRK 132
               Q+GYMPLRDD+E +YD +AE+++SGL ++ +D DV+  LK  HVDMY+ KL+ER RRK
Sbjct:    69 QQQLGYMPLRDDYEIEYDQDAETLISGLSVNYDDDDVEIELKRAHVDMYVRKLKERQRRK 128

GO:0030914 "STAGA complex" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	218
COG5114	432	COG5114, COG5114, Histone acetyltransferase comple	6e-06

>gnl|CDD|227445 COG5114, COG5114, Histone acetyltransferase complex SAGA/ADA, subunit ADA2 [Chromatin structure and dynamics]

 Score = 45.8 bits (108), Expect = 6e-06
 Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 12/133 (9%)

Query: 12  VGTEAREEYISRFLEGTIGKVTW--EDVLKNNQVKIIDMTDQLSEGPLATLPKGGPPIHI 69
           +G+ A+EE  S +L+       +   D+ +N  V   +  +Q             PPI+ 
Sbjct: 93  IGSRAKEEIKSHYLKMYDESKYYPLPDITQNIHVPQDEFLEQRRHRIETFEL---PPINP 149

Query: 70  AQEKADQ------IGYMPLRDDFEWQYDNNAESVVSGL-IHLEDTDVDTTLKLVHVDMYI 122
            + KA         GYMP R +F+ +Y N AE  +  +    +  ++   LK   +D+Y 
Sbjct: 150 RKPKASNPYCHEIQGYMPGRLEFDVEYMNEAEVPIKDMSFDGDKEELKKKLKNATLDIYN 209

Query: 123 NKLRERARRKRVV 135
           ++L  RARRK  +
Sbjct: 210 SRLTFRARRKHAI 222

Length = 432

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	218
KOG0457|consensus	438		100.0
COG5114	432	Histone acetyltransferase complex SAGA/ADA, subuni	100.0
PF00249	48	Myb_DNA-binding: Myb-like DNA-binding domain; Inte	88.79
PF13921	60	Myb_DNA-bind_6: Myb-like DNA-binding domain; PDB:	86.78

>KOG0457|consensus

Probab=100.00  E-value=3.3e-46  Score=347.92  Aligned_cols=184  Identities=24%  Similarity=0.358  Sum_probs=154.7

Q ss_pred             ccccCCCCCHHHHHHHhHhhcccCCCCCCchhhhhhcccccccCCccccC-CCCCCC-CCCCCCCCCCCcchhhhhccCC
Q psy10031          4 SLEFSFIQVGTEAREEYISRFLEGTIGKVTWEDVLKNNQVKIIDMTDQLS-EGPLAT-LPKGGPPIHIAQEKADQIGYMP   81 (218)
Q Consensus         4 ~~~~~gtRT~eEc~~HY~~~Yi~s~~~~~~lp~~~~~~~~~l~d~~~~~~-~~Pl~p-~~s~~pP~~s~p~~~e~~GYmP   81 (218)
                      .|+|+||||++||++||+++||+|++++.|+-... ...+...++..+.+ ..|+.| ...+.||..++|.+++++||||
T Consensus        98 IA~hIGtKtkeeck~hy~k~fv~s~~~~~~~i~~~-~~~~q~e~~~~~k~~~~~~~~~~~~pr~p~~~~p~~~e~~gyMp  176 (438)
T KOG0457|consen   98 IADHIGTKTKEECKEHYLKHFVNSPIFPLPDISLG-IGVNQDEDAAMAKNRAEPFQPTDLVPRKPGVSNPLRREISGYMP  176 (438)
T ss_pred             HHHHHcccchHHHHHHHHHHHhcCccccccccccc-cCcchHHHhhhcccccccCCCCCCCCCCCCCCCchHHHHhhhCc
Confidence            48899999999999999999999999976632111 01112222222223 445555 2334678899999999999999


Q ss_pred             CCCcCCccccCchhhhhhcCcc-CCCChhhhHHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHhhhcCCcchhhhcccC
Q psy10031         82 LRDDFEWQYDNNAESVVSGLIH-LEDTDVDTTLKLVHVDMYINKLRERARRKRVVKDFQLIPKFFNAQLNPETKTVKRKF  160 (218)
Q Consensus        82 ~R~dFE~EydNdAE~li~dm~f-~~D~~~e~~lKl~~l~~Yn~rL~eR~rRK~ii~e~~Ll~~~~~~~~~~~~~~~erk~  160 (218)
                      +|.|||.||||+||++|+||+| ++|++.+++||+++|+||++||++|.|||++|++|||+ +|+++|+      .++++
T Consensus       177 ~R~dFd~Eydn~AE~li~dm~f~e~D~~~d~elKla~ldiY~srl~eR~RRK~~I~d~nLl-~~rk~q~------~e~~~  249 (438)
T KOG0457|consen  177 GRLDFDEEYDNEAEQLIRDMEFEEDDTEEDHELKLAVLDIYNSRLKERKRRKRFIRDRNLL-DYRKNQA------MEKRL  249 (438)
T ss_pred             cchhhhhhhcchhhhhHhhcccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc-chhhhhH------HHhhc
Confidence            9999999999999999999999 99999999999999999999999999999999999999 7888887      99999


Q ss_pred             CCCCChhhhhhhhhccCCCCCccccccChhHHHHHHHHHHHHHH
Q psy10031        161 NKDDSPENGAVVNVLDFGSGGWWFKFKSKSSHKIYQVMIILVRS  204 (218)
Q Consensus       161 tkEErel~~~l~~~lkp~~~~~far~~s~edh~~~~~~ii~~~~  204 (218)
                      ||||    +.+++++|+     ||||+|++||++|+..++.+-.
T Consensus       250 skEe----r~l~~s~k~-----fAR~~t~~d~~kfl~~~~eE~~  284 (438)
T KOG0457|consen  250 SKEE----RELYNSIKV-----FARFLTKSDHDKFLGSVAEEKE  284 (438)
T ss_pred             cHHH----HHHHHHHHH-----HhcccChHHHHHHHHHHHHHHH
Confidence            9999    667888888     9999999999999999985543

>COG5114 Histone acetyltransferase complex SAGA/ADA, subunit ADA2 [Chromatin structure and dynamics]

Probab=100.00  E-value=1e-43  Score=322.62  Aligned_cols=188  Identities=21%  Similarity=0.328  Sum_probs=157.1

Q ss_pred             ccccCCCCCHHHHHHHhHhhcccCCCCCCchhhhhhcccccccCCcc---------ccCCCCCCCCCCCCCCCCCCcchh
Q psy10031          4 SLEFSFIQVGTEAREEYISRFLEGTIGKVTWEDVLKNNQVKIIDMTD---------QLSEGPLATLPKGGPPIHIAQEKA   74 (218)
Q Consensus         4 ~~~~~gtRT~eEc~~HY~~~Yi~s~~~~~~lp~~~~~~~~~l~d~~~---------~~~~~Pl~p~~s~~pP~~s~p~~~   74 (218)
                      .|.|+|.|+++||++||+++|+.|...  |+|.+..  ...++...+         .+..+|+.    +.+|.+|+|.||
T Consensus        89 IadyiGsr~kee~k~HylK~y~es~~y--pl~~i~~--~~~v~q~~f~~qrr~rie~f~~ppi~----prkP~aS~P~ch  160 (432)
T COG5114          89 IADYIGSRAKEEIKSHYLKMYDESKYY--PLPDITQ--NIHVPQDEFLEQRRHRIETFELPPIN----PRKPKASNPYCH  160 (432)
T ss_pred             HHHHHhhhhhHHHHHHHHHHHhhcccc--ccccccc--CCCCchHHHHHHHHhhhhhccCCCCC----CCCCCCCCCchh
Confidence            477899999999999999999999886  4443320  001111111         13344444    368999999999


Q ss_pred             hhhccCCCCCcCCccccCchhhhhhcCcc-CCCChhhhHHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHhhhcCCcch
Q psy10031         75 DQIGYMPLRDDFEWQYDNNAESVVSGLIH-LEDTDVDTTLKLVHVDMYINKLRERARRKRVVKDFQLIPKFFNAQLNPET  153 (218)
Q Consensus        75 e~~GYmP~R~dFE~EydNdAE~li~dm~f-~~D~~~e~~lKl~~l~~Yn~rL~eR~rRK~ii~e~~Ll~~~~~~~~~~~~  153 (218)
                      +++||||+|.|||+||.|+||..|+||.| +++.+++++||+++|+|||+||+.|.+||+.|++++|+ +|++-|+    
T Consensus       161 eiqgyMPgRleFd~EymnEaE~pikDm~fd~d~~el~~~lk~a~LdiYnsrlt~Ra~rK~~if~~nLm-Dyr~Lqa----  235 (432)
T COG5114         161 EIQGYMPGRLEFDVEYMNEAEVPIKDMSFDGDKEELKKKLKNATLDIYNSRLTFRARRKHAIFGKNLM-DYRNLQA----  235 (432)
T ss_pred             hhhccCCCccccchhhhhcccccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhH-HHHHHHh----
Confidence            99999999999999999999999999999 88899999999999999999999999999999999999 8998887    


Q ss_pred             hhhcccCCCCCChhhhhhhhhccCCCCCccccccChhHHHHHHHHHHH----------HHHHhccccchhhc
Q psy10031        154 KTVKRKFNKDDSPENGAVVNVLDFGSGGWWFKFKSKSSHKIYQVMIIL----------VRSYLSSSSETLET  215 (218)
Q Consensus       154 ~~~erk~tkEErel~~~l~~~lkp~~~~~far~~s~edh~~~~~~ii~----------~~~~~~~~~~~~~~  215 (218)
                        .+||+||||    +.++|++|+     |||++|+.||++|+++|.-          ---|-+.|+-|||.
T Consensus       236 --~dkk~skEe----~~l~N~iK~-----fAr~lT~~Df~~F~~~~~e~v~~~kri~~LqewR~~glttle~  296 (432)
T COG5114         236 --KDKKRSKEE----CGLVNSIKW-----FARYLTKSDFNVFFRDILEGVYIEKRIHELQEWRNNGLTTLEA  296 (432)
T ss_pred             --hhhhccHHH----HhHHHhhhH-----HHHhhcchhHHHHHHHHhhhhhHHHHHHHHHHHHhcCchhhhh
Confidence              899999999    667777666     9999999999999997652          23578889999984

>PF00249 Myb_DNA-binding: Myb-like DNA-binding domain; InterPro: IPR014778 The retroviral oncogene v-myb, and its cellular counterpart c-myb, encode nuclear DNA-binding proteins

Probab=88.79  E-value=0.17  Score=33.55  Aligned_cols=19  Identities=11%  Similarity=0.025  Sum_probs=15.9

Q ss_pred             cccCC-CCCHHHHHHHhHhh
Q psy10031          5 LEFSF-IQVGTEAREEYISR   23 (218)
Q Consensus         5 ~~~~g-tRT~eEc~~HY~~~   23 (218)
                      |.++| +||+.+|+.||.++
T Consensus        28 a~~~~~~Rt~~qc~~~~~~~   47 (48)
T PF00249_consen   28 AKRMPGGRTAKQCRSRYQNL   47 (48)
T ss_dssp             HHHHSSSSTHHHHHHHHHHH
T ss_pred             HHHcCCCCCHHHHHHHHHhh
Confidence            55666 99999999999864

These belong to the SANT domain family that specifically recognise the sequence YAAC(G/T)G [, ]. In myb, one of the most conserved regions consisting of three tandem repeats has been shown to be involved in DNA-binding [].; PDB: 1X41_A 2XAF_B 2XAG_B 2XAH_B 2UXN_B 2Y48_B 2XAQ_B 2X0L_B 2IW5_B 2XAJ_B ....

>PF13921 Myb_DNA-bind_6: Myb-like DNA-binding domain; PDB: 1A5J_A 1MBH_A 1GV5_A 1H89_C 1IDY_A 1MBK_A 1IDZ_A 1H88_C 1GVD_A 1MBG_A

Probab=86.78  E-value=0.47  Score=32.45  Aligned_cols=24  Identities=17%  Similarity=0.138  Sum_probs=18.7

Q ss_pred             cccCCCCCHHHHHHHhHhhcccCCC
Q psy10031          5 LEFSFIQVGTEAREEYISRFLEGTI   29 (218)
Q Consensus         5 ~~~~gtRT~eEc~~HY~~~Yi~s~~   29 (218)
                      |+++|+||+..|+.+|.. +|....
T Consensus        24 a~~l~~Rt~~~~~~r~~~-~l~~~~   47 (60)
T PF13921_consen   24 AEHLGNRTPKQCRNRWRN-HLRPKI   47 (60)
T ss_dssp             HHHSTTS-HHHHHHHHHH-TTSTTS
T ss_pred             HHHHCcCCHHHHHHHHHH-HCcccc
Confidence            778889999999999999 555433

...

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	218
2yus_A	79	SWI/SNF-related matrix-associated actin- dependent	96.66
2elk_A	58	SPCC24B10.08C protein; hypothetical protein, struc	96.29
1x41_A	60	Transcriptional adaptor 2-like, isoform B; transcr	96.29
1wgx_A	73	KIAA1903 protein; MYB DNA-binding domain, human cD	94.59
2yum_A	75	ZZZ3 protein, zinc finger ZZ-type-containing prote	93.89
2cqr_A	73	RSGI RUH-043, DNAJ homolog subfamily C member 1; m	91.55
2cjj_A	93	Radialis; plant development, DNA-binding protein,	91.1
4eef_G	74	F-HB80.4, designed hemagglutinin binding protein;	90.18
1gvd_A	52	MYB proto-oncogene protein; transcription, transcr	86.32
1guu_A	52	C-MYB, MYB proto-oncogene protein; transcription,	85.05
2dim_A	70	Cell division cycle 5-like protein; MYB_DNA-bindin	84.07
2d9a_A	60	B-MYB, MYB-related protein B; DNA binding, structu	80.27
2cu7_A	72	KIAA1915 protein; nuclear protein, SANT domain, DN	80.24

>2yus_A SWI/SNF-related matrix-associated actin- dependent regulator of chromatin subfamily...; SWI/SNF complex 155 kDa subunit, BRG1-associated factor 155; NMR {Homo sapiens}

Probab=96.66  E-value=0.00043  Score=50.71  Aligned_cols=26  Identities=12%  Similarity=-0.000  Sum_probs=23.6

Q ss_pred             ccccCCCCCHHHHHHHhHhhcccCCC
Q psy10031          4 SLEFSFIQVGTEAREEYISRFLEGTI   29 (218)
Q Consensus         4 ~~~~~gtRT~eEc~~HY~~~Yi~s~~   29 (218)
                      .|+++|+||+.+|+.||.++||+.+.
T Consensus        43 IA~~v~~RT~~qcr~r~~~~~i~d~~   68 (79)
T 2yus_A           43 VSEHVGSRTQDECILHFLRLPIEDPY   68 (79)
T ss_dssp             HHHHHSSCCHHHHHHHHTTSCCCCSS
T ss_pred             HHHHcCCCCHHHHHHHHHHhcccccc
Confidence            47889999999999999999999865

>2elk_A SPCC24B10.08C protein; hypothetical protein, structural genomics, NPPSFA; NMR {Schizosaccharomyces pombe}

Probab=96.29  E-value=0.0011  Score=45.49  Aligned_cols=23  Identities=17%  Similarity=0.465  Sum_probs=20.5

Q ss_pred             ccccCC-CCCHHHHHHHhHhhccc
Q psy10031          4 SLEFSF-IQVGTEAREEYISRFLE   26 (218)
Q Consensus         4 ~~~~~g-tRT~eEc~~HY~~~Yi~   26 (218)
                      .|.++| +||+.+|++||.++||+
T Consensus        35 IA~~~~~~Rt~~qcr~r~~~~~~~   58 (58)
T 2elk_A           35 IADYVGNARTKEECRDHYLKTYIE   58 (58)
T ss_dssp             HHHHHCSSCCHHHHHHHHHHHTTC
T ss_pred             HHHHHCCCCCHHHHHHHHHHHccC
Confidence            367788 99999999999999985

>1x41_A Transcriptional adaptor 2-like, isoform B; transcriptional adaptor protein2, transcriptional activation, MYB domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.1

Probab=96.29  E-value=0.0012  Score=45.44  Aligned_cols=26  Identities=12%  Similarity=0.137  Sum_probs=23.3

Q ss_pred             ccccCCCCCHHHHHHHhHhhcccCCC
Q psy10031          4 SLEFSFIQVGTEAREEYISRFLEGTI   29 (218)
Q Consensus         4 ~~~~~gtRT~eEc~~HY~~~Yi~s~~   29 (218)
                      .|.++++||+.+|++||.+++++++.
T Consensus        34 Ia~~~~~Rt~~qcr~r~~~~l~~~~~   59 (60)
T 1x41_A           34 VANQMCTKTKEECEKHYMKYFSGPSS   59 (60)
T ss_dssp             HHHHHTTSCHHHHHHHHHHHTTCSSC
T ss_pred             HHHHhCCCCHHHHHHHHHHHccCCCC
Confidence            47788999999999999999998865

>1wgx_A KIAA1903 protein; MYB DNA-binding domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: a.4.1.3

Probab=94.59  E-value=0.01  Score=43.17  Aligned_cols=20  Identities=10%  Similarity=0.074  Sum_probs=18.2

Q ss_pred             ccccCCCCCHHHHHHHhHhh
Q psy10031          4 SLEFSFIQVGTEAREEYISR   23 (218)
Q Consensus         4 ~~~~~gtRT~eEc~~HY~~~   23 (218)
                      .|++||+||++||+.||...
T Consensus        37 IA~~V~gKT~eE~~~hY~~l   56 (73)
T 1wgx_A           37 VAAAVGSRSPEECQRKYMEN   56 (73)
T ss_dssp             HHHHTTTSCHHHHHHHHHHS
T ss_pred             HHHHcCCCCHHHHHHHHHHH
Confidence            47889999999999999976

>2yum_A ZZZ3 protein, zinc finger ZZ-type-containing protein 3; transcription, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=93.89  E-value=0.017  Score=40.91  Aligned_cols=25  Identities=8%  Similarity=-0.060  Sum_probs=21.1

Q ss_pred             ccccCCCCCHHHHHHHhHhhcccCC
Q psy10031          4 SLEFSFIQVGTEAREEYISRFLEGT   28 (218)
Q Consensus         4 ~~~~~gtRT~eEc~~HY~~~Yi~s~   28 (218)
                      .|+++++||..+|+.||.+++....
T Consensus        39 IA~~~~~Rt~~qcr~r~~~~l~~~~   63 (75)
T 2yum_A           39 IADELGNRTAKQVASQVQKYFIKLT   63 (75)
T ss_dssp             HHHHHSSSCHHHHHHHHHHHHGGGS
T ss_pred             HHHHhCCCCHHHHHHHHHHHHHHHH
Confidence            3678899999999999998876653

>2cqr_A RSGI RUH-043, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3

Probab=91.55  E-value=0.086  Score=37.93  Aligned_cols=20  Identities=5%  Similarity=-0.132  Sum_probs=17.9

Q ss_pred             ccccCCCCCHHHHHHHhHhh
Q psy10031          4 SLEFSFIQVGTEAREEYISR   23 (218)
Q Consensus         4 ~~~~~gtRT~eEc~~HY~~~   23 (218)
                      .|.++++||+.||+.||...
T Consensus        47 IA~~vpGRT~~qcr~Ry~~L   66 (73)
T 2cqr_A           47 IARCVPSKSKEDCIARYKLL   66 (73)
T ss_dssp             HGGGCSSSCHHHHHHHHHHH
T ss_pred             HHHHcCCCCHHHHHHHHHHH
Confidence            58899999999999999864

>2cjj_A Radialis; plant development, DNA-binding protein, MYB transcription FA DNA-binding, nuclear protein, floral asymmetry; 1.9A {Antirrhinum majus} SCOP: a.4.1.3

Probab=91.10  E-value=0.059  Score=40.56  Aligned_cols=20  Identities=10%  Similarity=-0.074  Sum_probs=17.9

Q ss_pred             ccccCCCCCHHHHHHHhHhh
Q psy10031          4 SLEFSFIQVGTEAREEYISR   23 (218)
Q Consensus         4 ~~~~~gtRT~eEc~~HY~~~   23 (218)
                      .|.++++||++||+.||...
T Consensus        37 IA~~vpGRT~~q~k~ry~~l   56 (93)
T 2cjj_A           37 VARAVEGRTPEEVKKHYEIL   56 (93)
T ss_dssp             HHHHSTTCCHHHHHHHHHHH
T ss_pred             HHHHcCCCCHHHHHHHHHHH
Confidence            47889999999999999885

>4eef_G F-HB80.4, designed hemagglutinin binding protein; immunoglobulin, fusion of virus membrane with membrane, membrane fusion, sialic acid, virion; HET: NAG BMA; 2.70A {Artificial gene}

Probab=90.18  E-value=0.096  Score=38.25  Aligned_cols=18  Identities=11%  Similarity=0.163  Sum_probs=16.0

Q ss_pred             ccccCCCCCHHHHHHHhH
Q psy10031          4 SLEFSFIQVGTEAREEYI   21 (218)
Q Consensus         4 ~~~~~gtRT~eEc~~HY~   21 (218)
                      .|+.||+||++||+.||-
T Consensus        49 IA~~VpGKT~eEVk~hY~   66 (74)
T 4eef_G           49 VAQYVKGRTPEEVKKHYE   66 (74)
T ss_dssp             TGGGSCSSCHHHHHGGGC
T ss_pred             HHHHcCCCCHHHHHHHHH
Confidence            578888999999999994

>1gvd_A MYB proto-oncogene protein; transcription, transcription regulation, C-MYB, DNA binding, ION binding, nuclear protein; 1.45A {Mus musculus} SCOP: a.4.1.3 PDB: 1gv5_A 1mbg_A 1mbh_A

Probab=86.32  E-value=0.35  Score=31.59  Aligned_cols=20  Identities=15%  Similarity=0.232  Sum_probs=17.2

Q ss_pred             ccccCCCCCHHHHHHHhHhh
Q psy10031          4 SLEFSFIQVGTEAREEYISR   23 (218)
Q Consensus         4 ~~~~~gtRT~eEc~~HY~~~   23 (218)
                      .|.++++||..+|++||.++
T Consensus        29 Ia~~~~~Rt~~qcr~Rw~~~   48 (52)
T 1gvd_A           29 IAKHLKGRIGKQCRERWHNH   48 (52)
T ss_dssp             HHTTSTTCCHHHHHHHHHHT
T ss_pred             HHHHcCCCCHHHHHHHHHHH
Confidence            36788999999999999854

>1guu_A C-MYB, MYB proto-oncogene protein; transcription, transcription regulation, DNA binding, ION bindi proto-oncogene, nuclear protein, activator; 1.6A {Mus musculus} SCOP: a.4.1.3 PDB: 1mbe_A 1mbf_A

Probab=85.05  E-value=0.37  Score=31.39  Aligned_cols=20  Identities=0%  Similarity=0.014  Sum_probs=17.2

Q ss_pred             ccccCCCCCHHHHHHHhHhh
Q psy10031          4 SLEFSFIQVGTEAREEYISR   23 (218)
Q Consensus         4 ~~~~~gtRT~eEc~~HY~~~   23 (218)
                      .|.++++||+.+|++||.++
T Consensus        29 Ia~~~~~Rt~~qcr~Rw~~~   48 (52)
T 1guu_A           29 IANYLPNRTDVQCQHRWQKV   48 (52)
T ss_dssp             HHHTSTTCCHHHHHHHHHHH
T ss_pred             HHHHcCCCCHHHHHHHHHHH
Confidence            36788999999999999764

>2dim_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=84.07  E-value=0.54  Score=32.61  Aligned_cols=25  Identities=8%  Similarity=0.183  Sum_probs=19.7

Q ss_pred             ccccCCCCCHHHHHHHhHhhcccCCC
Q psy10031          4 SLEFSFIQVGTEAREEYISRFLEGTI   29 (218)
Q Consensus         4 ~~~~~gtRT~eEc~~HY~~~Yi~s~~   29 (218)
                      .|.++++||+.+|++||..+ |+..+
T Consensus        35 Ia~~l~~Rt~~qcr~Rw~~~-L~p~i   59 (70)
T 2dim_A           35 IASLLHRKSAKQCKARWYEW-LDPSI   59 (70)
T ss_dssp             HHHHSTTCCHHHHHHHHHHT-SCSSS
T ss_pred             HHHHhcCCCHHHHHHHHHHH-cCCcc
Confidence            36788999999999999874 55433

>2d9a_A B-MYB, MYB-related protein B; DNA binding, structural genomics, unknown function, NPPSFA; NMR {Mus musculus}

Probab=80.27  E-value=0.62  Score=31.27  Aligned_cols=20  Identities=0%  Similarity=-0.079  Sum_probs=16.9

Q ss_pred             ccccCCCCCHHHHHHHhHhh
Q psy10031          4 SLEFSFIQVGTEAREEYISR   23 (218)
Q Consensus         4 ~~~~~gtRT~eEc~~HY~~~   23 (218)
                      .|.++++||+.+|++||.++
T Consensus        34 Ia~~~~~Rt~~qcr~Rw~~~   53 (60)
T 2d9a_A           34 LASHFPNRTDQQCQYRWLRV   53 (60)
T ss_dssp             HHHHCSSSCHHHHHHHHHHT
T ss_pred             HHHHccCCCHHHHHHHHHHH
Confidence            35788899999999999854

>2cu7_A KIAA1915 protein; nuclear protein, SANT domain, DNA binding, regulation of transcription, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3

Probab=80.24  E-value=0.48  Score=33.17  Aligned_cols=23  Identities=4%  Similarity=-0.156  Sum_probs=19.0

Q ss_pred             ccccCCCCCHHHHHHHhHhhccc
Q psy10031          4 SLEFSFIQVGTEAREEYISRFLE   26 (218)
Q Consensus         4 ~~~~~gtRT~eEc~~HY~~~Yi~   26 (218)
                      .|.++++||..+|+.||..++-.
T Consensus        34 Ia~~~~~Rt~~q~k~r~~~~l~~   56 (72)
T 2cu7_A           34 ISKLIGSRTVLQVKSYARQYFKN   56 (72)
T ss_dssp             HHHHHSSSCHHHHHHHHHHHHHH
T ss_pred             HHHHcCCCCHHHHHHHHHHHHHH
Confidence            36788999999999999877543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	218
d1x41a1	47	Transcriptional adaptor 2-like, TADA2L, isoform b	96.75
d2cjja1	63	Radialis {Garden snapdragon (Antirrhinum majus) [T	89.85
d2cqra1	60	DnaJ homolog subfamily C member 1 {Human (Homo sap	88.97
d1wgxa_	73	Hypothetical protein C14orf106 (KIAA1903) {Human (	88.03
d1guua_	50	c-Myb, DNA-binding domain {Mouse (Mus musculus) [T	87.28
d2cu7a1	65	MYSM1 (KIAA1915) {Human (Homo sapiens) [TaxId: 960	87.07
d1gvda_	52	c-Myb, DNA-binding domain {Mouse (Mus musculus) [T	81.87
d2iw5b1	65	REST corepressor 1, CoREST {Human (Homo sapiens) [	81.8

>d1x41a1 a.4.1.1 (A:8-54) Transcriptional adaptor 2-like, TADA2L, isoform b {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: Homeodomain-like
family: Homeodomain
domain: Transcriptional adaptor 2-like, TADA2L, isoform b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.75  E-value=0.00015  Score=46.64  Aligned_cols=21  Identities=14%  Similarity=0.245  Sum_probs=19.3

Q ss_pred             ccccCCCCCHHHHHHHhHhhc
Q psy10031          4 SLEFSFIQVGTEAREEYISRF   24 (218)
Q Consensus         4 ~~~~~gtRT~eEc~~HY~~~Y   24 (218)
                      .|+++|+||+.+|+.||.++|
T Consensus        27 Ia~~~~~Rt~~Qcr~r~~~~f   47 (47)
T d1x41a1          27 VANQMCTKTKEECEKHYMKYF   47 (47)
T ss_dssp             HHHHHTTSCHHHHHHHHHHHT
T ss_pred             HHHHcCCCCHHHHHHHHHHhC
Confidence            378899999999999999998

>d2cjja1 a.4.1.3 (A:8-70) Radialis {Garden snapdragon (Antirrhinum majus) [TaxId: 4151]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: Homeodomain-like
family: Myb/SANT domain
domain: Radialis
species: Garden snapdragon (Antirrhinum majus) [TaxId: 4151]

Probab=89.85  E-value=0.055  Score=35.73  Aligned_cols=19  Identities=11%  Similarity=-0.039  Sum_probs=16.6

Q ss_pred             ccccCCCCCHHHHHHHhHh
Q psy10031          4 SLEFSFIQVGTEAREEYIS   22 (218)
Q Consensus         4 ~~~~~gtRT~eEc~~HY~~   22 (218)
                      .|+++++||+.+|++||..
T Consensus        30 Ia~~l~gRt~~qc~~r~~~   48 (63)
T d2cjja1          30 VARAVEGRTPEEVKKHYEI   48 (63)
T ss_dssp             HHHHSTTCCHHHHHHHHHH
T ss_pred             HHHHcCCCCHHHHHHHHHH
Confidence            4788999999999999953

>d2cqra1 a.4.1.3 (A:7-66) DnaJ homolog subfamily C member 1 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: Homeodomain-like
family: Myb/SANT domain
domain: DnaJ homolog subfamily C member 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.97  E-value=0.094  Score=34.13  Aligned_cols=19  Identities=5%  Similarity=-0.101  Sum_probs=16.9

Q ss_pred             ccccCCCCCHHHHHHHhHh
Q psy10031          4 SLEFSFIQVGTEAREEYIS   22 (218)
Q Consensus         4 ~~~~~gtRT~eEc~~HY~~   22 (218)
                      .|+++|+||+.+|+.||..
T Consensus        41 IA~~l~~Rt~~qc~~R~~~   59 (60)
T d2cqra1          41 IARCVPSKSKEDCIARYKL   59 (60)
T ss_dssp             HGGGCSSSCHHHHHHHHHH
T ss_pred             HHHHcCCCCHHHHHHHHHH
Confidence            4889999999999999964

>d1wgxa_ a.4.1.3 (A:) Hypothetical protein C14orf106 (KIAA1903) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: Homeodomain-like
family: Myb/SANT domain
domain: Hypothetical protein C14orf106 (KIAA1903)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.03  E-value=0.084  Score=36.58  Aligned_cols=19  Identities=11%  Similarity=0.095  Sum_probs=17.2

Q ss_pred             cccCCCCCHHHHHHHhHhh
Q psy10031          5 LEFSFIQVGTEAREEYISR   23 (218)
Q Consensus         5 ~~~~gtRT~eEc~~HY~~~   23 (218)
                      |-.|||||++||+.-|...
T Consensus        38 A~~VGtRSaeECQ~ky~~~   56 (73)
T d1wgxa_          38 AAAVGSRSPEECQRKYMEN   56 (73)
T ss_dssp             HHHTTTSCHHHHHHHHHHS
T ss_pred             HHHHccCCHHHHHHHHHhC
Confidence            6689999999999999876

>d1guua_ a.4.1.3 (A:) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: Homeodomain-like
family: Myb/SANT domain
domain: c-Myb, DNA-binding domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=87.28  E-value=0.12  Score=32.64  Aligned_cols=22  Identities=5%  Similarity=0.119  Sum_probs=18.2

Q ss_pred             ccccCCCCCHHHHHHHhHhhccc
Q psy10031          4 SLEFSFIQVGTEAREEYISRFLE   26 (218)
Q Consensus         4 ~~~~~gtRT~eEc~~HY~~~Yi~   26 (218)
                      .|.++++||+.+|++||.+ ||+
T Consensus        27 Ia~~~~~Rt~~qcr~Rw~~-~L~   48 (50)
T d1guua_          27 IANYLPNRTDVQCQHRWQK-VLN   48 (50)
T ss_dssp             HHHTSTTCCHHHHHHHHHH-HHS
T ss_pred             HHHHHCCCCHHHHHHHHHh-hCC
Confidence            3678899999999999987 443

>d2cu7a1 a.4.1.3 (A:8-72) MYSM1 (KIAA1915) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: Homeodomain-like
family: Myb/SANT domain
domain: MYSM1 (KIAA1915)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.07  E-value=0.071  Score=34.97  Aligned_cols=24  Identities=4%  Similarity=-0.165  Sum_probs=19.6

Q ss_pred             ccccCCCCCHHHHHHHhHhhcccC
Q psy10031          4 SLEFSFIQVGTEAREEYISRFLEG   27 (218)
Q Consensus         4 ~~~~~gtRT~eEc~~HY~~~Yi~s   27 (218)
                      .|.++++||+.+|+.||.+++-..
T Consensus        27 Ia~~~~~Rt~~q~k~ry~~~~~~~   50 (65)
T d2cu7a1          27 ISKLIGSRTVLQVKSYARQYFKNK   50 (65)
T ss_dssp             HHHHHSSSCHHHHHHHHHHHHHHH
T ss_pred             HHHHcCCCCHHHHHHHHHHHHHHH
Confidence            467899999999999998765443

>d1gvda_ a.4.1.3 (A:) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: Homeodomain-like
family: Myb/SANT domain
domain: c-Myb, DNA-binding domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=81.87  E-value=0.36  Score=30.55  Aligned_cols=20  Identities=15%  Similarity=0.232  Sum_probs=17.3

Q ss_pred             ccccCCCCCHHHHHHHhHhh
Q psy10031          4 SLEFSFIQVGTEAREEYISR   23 (218)
Q Consensus         4 ~~~~~gtRT~eEc~~HY~~~   23 (218)
                      .|.++++||+.+|+++|.++
T Consensus        29 Ia~~l~~Rt~~qc~~Rw~~~   48 (52)
T d1gvda_          29 IAKHLKGRIGKQCRERWHNH   48 (52)
T ss_dssp             HHTTSTTCCHHHHHHHHHHT
T ss_pred             HHHHHCCCCHHHHHHHHHhh
Confidence            37788999999999999853

>d2iw5b1 a.4.1.3 (B:376-440) REST corepressor 1, CoREST {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: Homeodomain-like
family: Myb/SANT domain
domain: REST corepressor 1, CoREST
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.80  E-value=0.2  Score=32.81  Aligned_cols=20  Identities=0%  Similarity=-0.079  Sum_probs=17.5

Q ss_pred             ccccCCCCCHHHHHHHhHhh
Q psy10031          4 SLEFSFIQVGTEAREEYISR   23 (218)
Q Consensus         4 ~~~~~gtRT~eEc~~HY~~~   23 (218)
                      .|.++|+||+.+|+.||...
T Consensus        30 Ia~~~~~kt~~q~~~~y~~~   49 (65)
T d2iw5b1          30 ISDVIGNKSVVQVKNFFVNY   49 (65)
T ss_dssp             HHHHHSSCCHHHHHHHHHHT
T ss_pred             HHHHcCCCCHHHHHHHHHHH
Confidence            36789999999999999875