Psyllid ID: psy10039

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450
MAEKDLLHLLMEENTNELRRRDLALFLREYCQFSQNLQPQAKENFYKTLSSLGILPALEVVLSAEDIATKNAAIDILNFIIEFSPSFIRDYTLQQAACISREEQDPMLVNVIIEQMVSDTDPELGRAVQLMSILKILIDPDNMLSSINKTEKCEFLNYFYKYSIHLLMDPLLDNTKKDEVQVDSYHNAQLLGVILELLSFCVEHHSYHIKNFVLNKDLLRKVLVLMKSCHTFLVLSSLRFMRKIIAMKDDFYNRYIIKGHLFQPVIDTFNRNKGRYNLLDSAVLELFEYIKLEDIKVLCSHVVETYGDELESIHYVQTFRSLRLKYNQAQDKLKDLKDKSSTNLLDSVSLLRNKMTTIHRSSRAHQEPRQMDEDEEIWFNEEDSFEDASADTSPPSVTSSQLGNSAASNVITFESIGKSLSEKKVSSDSLGALVDYEEDSDEEEDPQQDT
cHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccHHHHHHHHHcccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHccccHHHHHHHHHcccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHccHHHccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
cHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccHHHHHHHHccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHccccccccHHHHHHHHHHHHccccHcHcHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHccHHHHHHEHcccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccHccccccccccHcccHHHHHHHccccccccccccccccccccccccccccccccccHHccccccccccccccccccccccccccccccccccc
MAEKDLLHLLMEENTNELRRRDLALFLREYCQFSQNLQPQAKENFYKTLSSLGILPALEVVLSAEDIATKNAAIDILNFIIefspsfirDYTLQQAACisreeqdpMLVNVIIEQMVSDTDPELGRAVQLMSILKILidpdnmlssinktekceFLNYFYKYSIHLLmdplldntkkdevqvdsYHNAQLLGVILELLSFCVEHHSYHIKNFVLNKDLLRKVLVLMKSCHTFLVLSSLRFMRKIIAMKDDFYnryiikghlfqpVIDTFnrnkgrynlLDSAVLELFEYIKLEDIKVLCSHVVETYGDELESIHYVQTFRSLRLKYNQAQDKlkdlkdksstnlLDSVSLLRNKMTtihrssrahqeprqmdedeeiwfneedsfedasadtsppsvtssqlgnsaasnVITFESIGKSlsekkvssdslgalvdyeedsdeeedpqqdt
MAEKDLLHLLMEENTNELRRRDLALFLREYCQFSQNLQPQAKENFYKTLSSLGILPALEVVLSAEDIATKNAAIDILNFIIEFSPSFIRDYTLQQAACISREEQDPMLVNVIIEQMVSDTDPELGRAVQLMSILKILIDPDNMLSSINKTEKCEFLNYFYKYSIHLLMDPLLDNTKKDEVQVDSYHNAQLLGVILELLSFCVEHHSYHIKNFVLNKDLLRKVLVLMKSCHTFLVLSSLRFMRKIIAMKDDFYNRYIIKGHLFQPVIDTFNRNKGRYNLLDSAVLELFEYIKLEDIKVLCSHVVETYGDELESIHYVQTFRSLRLKYNQAQDklkdlkdksstnlLDSVSLLRNKMTtihrssrahqeprqmdEDEEIWFNEEDSFEDASADTSPPsvtssqlgnsaasNVITFESIGkslsekkvssdsLGALvdyeedsdeeedpqqdt
MAEKDLLHLLMEENTNELRRRDLALFLREYCQFSQNLQPQAKENFYKTLSSLGILPALEVVLSAEDIATKNAAIDILNFIIEFSPSFIRDYTLQQAACISREEQDPMLVNVIIEQMVSDTDPELGRAVQLMSILKILIDPDNMLSSINKTEKCEFLNYFYKYSIHLLMDPLLDNTKKDEVQVDSYHNAQLLGVILELLSFCVEHHSYHIKNFVLNKDLLRKVLVLMKSCHTFLVLSSLRFMRKIIAMKDDFYNRYIIKGHLFQPVIDTFNRNKGRYNLLDSAVLELFEYIKLEDIKVLCSHVVETYGDELESIHYVQTFRSLRLKYNQAQdklkdlkdksstnlldsVSLLRNKMTTIHRSSRAHQEPRQMDEDEEIWFNEEDSFEDASADTSPPSVTSSQLGNSAASNVITFESIGKSLSEKKVSSDSLGALVdyeedsdeeedpqqdT
*********L******ELRRRDLALFLREYCQFSQNLQPQAKENFYKTLSSLGILPALEVVLSAEDIATKNAAIDILNFIIEFSPSFIRDYTLQQAACISREEQDPMLVNVIIEQMVSDTDPELGRAVQLMSILKILIDPDNMLSSINKTEKCEFLNYFYKYSIHLLMDPLLDNTKKDEVQVDSYHNAQLLGVILELLSFCVEHHSYHIKNFVLNKDLLRKVLVLMKSCHTFLVLSSLRFMRKIIAMKDDFYNRYIIKGHLFQPVIDTFNRNKGRYNLLDSAVLELFEYIKLEDIKVLCSHVVETYGDELESIHYVQTFRSLRLKYN***************************************************************************************************************************
*AEKDLLH**************LALFLREYCQFSQNLQPQAKENFYKTLSSLGILPALEVVLSAEDIATKNAAIDILNFIIEFSPSFIRDYTL**************LVNVIIEQMVSDTDPELGRAVQLMSILKILIDPD************EFLNYFYKYSIHLLMDPLLDNTK*******SYHNAQLLGVILELLSFCVEHHSYHIKNFVLNKDLLRKVLVLMKSCHTFLVLSSLRFMRKIIAMKDDFYNRYIIKGHLFQPVIDTFNRNKGRYNLLDSAVLELFEYIKLEDIKVLCSHVVETYGDELESIHYVQTFRSLRLK*****************************************************************************************************************************
MAEKDLLHLLMEENTNELRRRDLALFLREYCQFSQNLQPQAKENFYKTLSSLGILPALEVVLSAEDIATKNAAIDILNFIIEFSPSFIRDYTLQQAACISREEQDPMLVNVIIEQMVSDTDPELGRAVQLMSILKILIDPDNMLSSINKTEKCEFLNYFYKYSIHLLMDPLLDNTKKDEVQVDSYHNAQLLGVILELLSFCVEHHSYHIKNFVLNKDLLRKVLVLMKSCHTFLVLSSLRFMRKIIAMKDDFYNRYIIKGHLFQPVIDTFNRNKGRYNLLDSAVLELFEYIKLEDIKVLCSHVVETYGDELESIHYVQTFRSLRLKYNQAQDKLKDLKDKSSTNLLDSVSLLRNKMTTI**************EDEEIWFNEED*********************SAASNVITFESIGKS**********LGALVD***************
***KDLLHLLMEENTNELRRRDLALFLREYCQFSQNLQPQAKENFYKTLSSLGILPALEVVLSAEDIATKNAAIDILNFIIEFSPSFIRDYTLQQAACISREEQDPMLVNVIIEQMVSDTDPELGRAVQLMSILKILIDPDNMLSSINKTEKCEFLNYFYKYSIHLLMDPLLDNTKKDEVQVDSYHNAQLLGVILELLSFCVEHHSYHIKNFVLNKDLLRKVLVLMKSCHTFLVLSSLRFMRKIIAMKDDFYNRYIIKGHLFQPVIDTFNRNKGRYNLLDSAVLELFEYIKLEDIKVLCSHVVETYGDELESIHYVQTFRSLRLKYNQAQD***********************************************************************************************************************
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MAEKDLLHLLMEENTNELRRRDLALFLREYCQFSQNLQPQAKENFYKTLSSLGILPALEVVLSAEDIATKNAAIDILNFIIEFSPSFIRDYTLQQAACISREEQDPMLVNVIIEQMVSDTDPELGRAVQLMSILKILIDPDNMLSSINKTEKCEFLNYFYKYSIHLLMDPLLDNTKKDEVQVDSYHNAQLLGVILELLSFCVEHHSYHIKNFVLNKDLLRKVLVLMKSCHTFLVLSSLRFMRKIIAMKDDFYNRYIIKGHLFQPVIDTFNRNKGRYNLLDSAVLELFEYIKLEDIKVLCSHVVETYGDELESIHYVQTxxxxxxxxxxxxxxxxxxxxxSSTNLLDSVSLLRNKMTTIHRSSRAHQEPRQMDEDEEIWFNEEDSFEDASADTSPPSVTSSQLGNSAASNVITFESIGKSLSEKKVSSDSLGALVDYEEDSDEEEDPQQDT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query450 2.2.26 [Sep-21-2011]
Q922R5820 Serine/threonine-protein yes N/A 0.813 0.446 0.513 1e-113
Q9VFS5 980 Serine/threonine-protein yes N/A 0.78 0.358 0.544 1e-113
Q801Q7820 Serine/threonine-protein N/A N/A 0.813 0.446 0.505 1e-112
Q7ZX60820 Serine/threonine-protein N/A N/A 0.813 0.446 0.505 1e-112
Q6P2K6820 Serine/threonine-protein no N/A 0.837 0.459 0.498 1e-111
Q5SP90818 Serine/threonine-protein yes N/A 0.831 0.457 0.478 1e-111
Q6DFT3820 Serine/threonine-protein yes N/A 0.784 0.430 0.514 1e-111
Q6IN85833 Serine/threonine-protein yes N/A 0.844 0.456 0.488 1e-110
Q5MIZ7849 Serine/threonine-protein no N/A 0.813 0.431 0.473 1e-109
Q6INN7822 Serine/threonine-protein N/A N/A 0.844 0.462 0.492 1e-108
>sp|Q922R5|P4R3B_MOUSE Serine/threonine-protein phosphatase 4 regulatory subunit 3B OS=Mus musculus GN=Smek2 PE=2 SV=2 Back     alignment and function desciption
 Score =  410 bits (1053), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 205/399 (51%), Positives = 288/399 (72%), Gaps = 33/399 (8%)

Query: 10  LMEENTNELRRRDLALFLREYCQFSQNLQPQAKENFYKTLSSLGILPALEVVLSAEDIAT 69
           L +E T++ +RR+L  F +E+C FSQ LQPQ ++ F+KTL+ LGILPALE+V+  +D+  
Sbjct: 320 LTDEATDDDKRRELVNFFKEFCAFSQTLQPQNRDAFFKTLAKLGILPALEIVMGMDDLQV 379

Query: 70  KNAAIDILNFIIEFSPSFIRDYTLQQAACISREEQDPMLVNVIIEQMVSDTDPELGRAVQ 129
           ++AA DI ++++EFSPS +R++ +Q+A    + + D +L+NV+IEQM+ DTDPELG AVQ
Sbjct: 380 RSAATDIFSYLVEFSPSMVREFVMQEA---QQSDDDVLLINVVIEQMICDTDPELGGAVQ 436

Query: 130 LMSILKILIDPDNMLSSINKTEKCEFLNYFYKYSIHLLMDPLLDNTKKDEVQ-------- 181
           LM +L+ LIDP+NML++ NKTEK EFLN+FY + +H+L  PLL NT +D+ +        
Sbjct: 437 LMGLLRTLIDPENMLATTNKTEKSEFLNFFYNHCMHVLTAPLLTNTSEDKCEKDNMLGSN 496

Query: 182 ------VDSYHNAQLLGVILELLSFCVEHHSYHIKNFVLNKDLLRKVLVLMKSCHTFLVL 235
                  D+Y  AQLL +ILELL+FCVEHH+YHIKN+++NKDLLR+VLVLM S HTFL L
Sbjct: 497 TTNTICPDNYQTAQLLALILELLTFCVEHHTYHIKNYIMNKDLLRRVLVLMNSKHTFLAL 556

Query: 236 SSLRFMRKIIAMKDDFYNRYIIKGHLFQPVIDTFNRNKGRYNLLDSAVLELFEYIKLEDI 295
            +LRFMR+II +KD+FYNRYI KG+LF+PVI+    N  RYNLL+SAV+ELFE+I++EDI
Sbjct: 557 CALRFMRRIIGLKDEFYNRYITKGNLFEPVINALLDNGTRYNLLNSAVIELFEFIRVEDI 616

Query: 296 KVLCSHVVETYGDELESIHYVQTFRSLRLKYNQAQDKLKDLKDKSSTNLLDSVSLLRNKM 355
           K L +H+VE +   LESI YVQTF+ L+ KY Q        KD+ +  L        N +
Sbjct: 617 KSLTAHIVENFYKALESIEYVQTFKGLKTKYEQE-------KDRQNQKL--------NSV 661

Query: 356 TTIHRSSRAHQEPRQMDEDEEIWFNEEDSFEDASADTSP 394
            +I RS+R  ++ + ++EDEE+WFNE+D  E+  A  +P
Sbjct: 662 PSILRSNRFRRDAKALEEDEEMWFNEDDD-EEGKAVITP 699
Regulatory subunit of serine/threonine-protein phosphatase 4 (PP4). May regulate the activity of PPP4C at centrosomal microtubule organizing centers.
Mus musculus (taxid: 10090)
>sp|Q9VFS5|PP4R3_DROME Serine/threonine-protein phosphatase 4 regulatory subunit 3 OS=Drosophila melanogaster GN=flfl PE=1 SV=4 Back     alignment and function description
>sp|Q801Q7|P4R3B_XENLA Serine/threonine-protein phosphatase 4 regulatory subunit 3-B OS=Xenopus laevis GN=smek2-b PE=2 SV=1 Back     alignment and function description
>sp|Q7ZX60|P4R3A_XENLA Serine/threonine-protein phosphatase 4 regulatory subunit 3-A OS=Xenopus laevis GN=smek2-a PE=2 SV=1 Back     alignment and function description
>sp|Q6P2K6|P4R3A_MOUSE Serine/threonine-protein phosphatase 4 regulatory subunit 3A OS=Mus musculus GN=Smek1 PE=1 SV=1 Back     alignment and function description
>sp|Q5SP90|PP4R3_DANRE Serine/threonine-protein phosphatase 4 regulatory subunit 3 OS=Danio rerio GN=smek1 PE=1 SV=1 Back     alignment and function description
>sp|Q6DFT3|PP4R3_XENTR Serine/threonine-protein phosphatase 4 regulatory subunit 3 OS=Xenopus tropicalis GN=smek2 PE=2 SV=1 Back     alignment and function description
>sp|Q6IN85|P4R3A_HUMAN Serine/threonine-protein phosphatase 4 regulatory subunit 3A OS=Homo sapiens GN=SMEK1 PE=1 SV=1 Back     alignment and function description
>sp|Q5MIZ7|P4R3B_HUMAN Serine/threonine-protein phosphatase 4 regulatory subunit 3B OS=Homo sapiens GN=SMEK2 PE=1 SV=2 Back     alignment and function description
>sp|Q6INN7|PP4R3_XENLA Serine/threonine-protein phosphatase 4 regulatory subunit 3 OS=Xenopus laevis GN=smek1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query450
357621080 786 hypothetical protein KGM_11507 [Danaus p 0.96 0.549 0.550 1e-131
270009769 786 hypothetical protein TcasGA2_TC009066 [T 0.826 0.473 0.619 1e-130
242022675 848 conserved hypothetical protein [Pediculu 0.826 0.438 0.627 1e-130
156542387 843 PREDICTED: serine/threonine-protein phos 0.873 0.466 0.615 1e-128
328722929 799 PREDICTED: serine/threonine-protein phos 0.895 0.504 0.551 1e-128
189239244 778 PREDICTED: similar to falafel CG9351-PA 0.808 0.467 0.606 1e-127
350411184 806 PREDICTED: serine/threonine-protein phos 0.866 0.483 0.600 1e-127
340714594 806 PREDICTED: serine/threonine-protein phos 0.866 0.483 0.600 1e-127
383863759 812 PREDICTED: serine/threonine-protein phos 0.866 0.480 0.598 1e-127
347969834 1136 AGAP003402-PA [Anopheles gambiae str. PE 0.855 0.338 0.556 1e-126
>gi|357621080|gb|EHJ73043.1| hypothetical protein KGM_11507 [Danaus plexippus] Back     alignment and taxonomy information
 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 254/461 (55%), Positives = 332/461 (72%), Gaps = 29/461 (6%)

Query: 5   DLLHLLMEENTNELRRRDLALFLREYCQFSQNLQPQAKENFYKTLSSLGILPALEVVLSA 64
           DL  LLM+  T + +RRDL LFL+E+C FSQNLQPQ K+ FYKTL SLGILPALE+ LS 
Sbjct: 315 DLFKLLMDVKTPDSKRRDLVLFLKEFCNFSQNLQPQDKDAFYKTLVSLGILPALEITLSI 374

Query: 65  EDIATKNAAIDILNFIIEFSPSFIRDYTLQQAACISREEQDPMLVNVIIEQMVSDTDPEL 124
           +D  TK A+IDIL +I+EFSPS +RDYTLQQA   +  E++ ML+N++IEQM+ D DPEL
Sbjct: 375 DDQKTKTASIDILTYIVEFSPSVVRDYTLQQA---NNTEEEQMLLNIVIEQMLRDQDPEL 431

Query: 125 GRAVQLMSILKILIDPDNMLSSINKTEKCEFLNYFYKYSIHLLMDPLLDNTKKDEVQVDS 184
           G AVQLM +L+IL+DP++ML+S+NK+EK +FLN+FYK+SI  L+ PLL NT  ++   + 
Sbjct: 432 GGAVQLMGVLRILLDPESMLASVNKSEKVDFLNFFYKHSIQTLIAPLLQNTTGEKPSKED 491

Query: 185 YHNAQLLGVILELLSFCVEHHSYHIKNFVLNKDLLRKVLVLMKSCHTFLVLSSLRFMRKI 244
           YH  QLLG++LELLSFCVEHH+YHIK  +LNKDLLR++LVLM+  HTFLVL +LRFMRKI
Sbjct: 492 YHTVQLLGLVLELLSFCVEHHTYHIKTCILNKDLLRRILVLMRCTHTFLVLGALRFMRKI 551

Query: 245 IAMKDDFYNRYIIKGHLFQPVIDTFNRNKGRYNLLDSAVLELFEYIKLEDIKVLCSHVVE 304
           IA+KD++YNRYIIKG LF PV+D F RN GRYNLLDSA+LELFE+IKLEDIK LCSHVVE
Sbjct: 552 IALKDEYYNRYIIKGSLFAPVVDAFLRNNGRYNLLDSAILELFEFIKLEDIKSLCSHVVE 611

Query: 305 TYGDELESIHYVQTFRSLRLKYNQAQDKLKDLKDKSSTNLLDSVSLLRNKMTTIHRSSRA 364
            YG  LE + YVQTF++L+ +Y+Q QDKLK+ +D+ S     SV++    + ++ R+ R 
Sbjct: 612 NYGKILEDVEYVQTFKALKTRYDQHQDKLKE-RDRVSG----SVAVAEAVVPSLLRT-RY 665

Query: 365 HQEPRQMDEDEEIWFNEEDSFED------------------ASADTSPPSVTSSQLGNSA 406
            +E RQ D++EE+WFN++D  ED                  A        V SS    + 
Sbjct: 666 RREARQPDDEEEMWFNDDDELEDDAPLDAAATHATAHHALDAIGKIVEKKVCSSTETVNG 725

Query: 407 ASNVITFESIGKSLSEKKVSSDSL--GALVDYEEDSDEEED 445
            S V+   S     ++ +VS+  L    LVDY+ DSDEE++
Sbjct: 726 PSRVLLSTSPKPVHTDVQVSTPRLLNKGLVDYDGDSDEEDE 766

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|270009769|gb|EFA06217.1| hypothetical protein TcasGA2_TC009066 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|242022675|ref|XP_002431764.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212517089|gb|EEB19026.1| conserved hypothetical protein [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|156542387|ref|XP_001600817.1| PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 3-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|328722929|ref|XP_001944733.2| PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 3-like isoform 1 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|189239244|ref|XP_974259.2| PREDICTED: similar to falafel CG9351-PA [Tribolium castaneum] Back     alignment and taxonomy information
>gi|350411184|ref|XP_003489266.1| PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 3-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|340714594|ref|XP_003395811.1| PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 3-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|383863759|ref|XP_003707347.1| PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 3-like isoform 1 [Megachile rotundata] Back     alignment and taxonomy information
>gi|347969834|ref|XP_311690.5| AGAP003402-PA [Anopheles gambiae str. PEST] gi|333467612|gb|EAA07402.5| AGAP003402-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query450
FB|FBgn0024555 980 flfl "falafel" [Drosophila mel 0.824 0.378 0.530 2.1e-107
UNIPROTKB|Q5MIZ7849 SMEK2 "Serine/threonine-protei 0.48 0.254 0.495 1.6e-105
UNIPROTKB|F1NNI1825 SMEK2 "Uncharacterized protein 0.813 0.443 0.503 5.1e-104
UNIPROTKB|F6R1L1820 SMEK1 "Uncharacterized protein 0.842 0.462 0.496 8.6e-104
UNIPROTKB|G3V5Z3706 SMEK1 "Uncharacterized protein 0.842 0.536 0.493 1.1e-103
UNIPROTKB|F1SD90820 SMEK1 "Uncharacterized protein 0.842 0.462 0.493 1.1e-103
MGI|MGI:1915984820 Smek1 "SMEK homolog 1, suppres 0.842 0.462 0.493 1.1e-103
MGI|MGI:2144474820 Smek2 "SMEK homolog 2, suppres 0.813 0.446 0.506 3.7e-103
UNIPROTKB|F1NPW9844 SMEK1 "Uncharacterized protein 0.831 0.443 0.498 1.3e-102
UNIPROTKB|F1SQL1756 SMEK2 "Uncharacterized protein 0.817 0.486 0.502 2e-102
FB|FBgn0024555 flfl "falafel" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 1038 (370.5 bits), Expect = 2.1e-107, Sum P(2) = 2.1e-107
 Identities = 206/388 (53%), Positives = 280/388 (72%)

Query:     5 DLLHLLMEENTNELRRRDLALFLREYCQFSQNLQPQAKENFYKTLSSLGILPALEVVLSA 64
             D+  +L +  T + +RRD  LFL+E+C ++QNLQPQ K++FYKTL+ LGIL ALE+ L  
Sbjct:   317 DVFAVLTDPTTGDAKRRDTVLFLKEFCNYAQNLQPQGKDSFYKTLTCLGILQALELTLVM 376

Query:    65 EDIATKNAAIDILNFIIEFSPSFIRDYTLQQAACISREEQDPMLVNVIIEQMVSDTDPEL 124
              D  TK+A+IDIL  I+EFSP  +R+YTL QA   +R E + ML+N+ IEQM++D++PEL
Sbjct:   377 NDKKTKSASIDILTAIVEFSPLVVRNYTLNQA---NRPEVERMLLNIAIEQMLNDSEPEL 433

Query:   125 GRAVQLMSILKILIDPDNMLSSINKTEKCEFLNYFYKYSIHLLMDPLLDNTKKDEVQVDS 184
             G AVQLM I+KIL++P+NML     TEK +FLN+FYKYS+  L+ P++ NT  D  Q + 
Sbjct:   434 GIAVQLMGIVKILLEPENML-----TEKGDFLNFFYKYSVQTLVAPVILNTIGDRPQNED 488

Query:   185 YHNAQLLGVILELLSFCVEHHSYHIKNFVLNKDLLRKVLVLMKSCHTFLVLSSLRFMRKI 244
             Y  AQLLG++L++LSFCVEHHSYHIKNF+L KDLL+++LVLMKS HTFLVL +LR +RKI
Sbjct:   489 YQTAQLLGIVLDILSFCVEHHSYHIKNFLLQKDLLKRILVLMKSTHTFLVLGALRLLRKI 548

Query:   245 IAMKDDFYNRYIIKGHLFQPVIDTFNRNKGRYNLLDSAVLELFEYIKLEDIKVLCSHVVE 304
             IA+KD+FYNR+I+K +LF PV+D F RN GRYNLL+SA+LELFE+IKLEDI+ LC + VE
Sbjct:   549 IALKDEFYNRHIVKCNLFAPVVDAFIRNNGRYNLLESAILELFEFIKLEDIRTLCVYFVE 608

Query:   305 TYGDELESIHYVQTFRSLRLKYNQAQXXXXXXXXXXXXXXXXXVSLLRNKMTTIHRSSRA 364
              +    + I YVQTF+ L+ +Y+Q Q                 + ++R+         R 
Sbjct:   609 NFSKIFDEIEYVQTFKYLKNRYDQYQDRLKDRDKMENRTDGG-LPIIRS-------GGRF 660

Query:   365 HQEPRQMDEDEEIWFNEEDSFEDASADT 392
              ++ RQM+E+EE+WFNEED F +   DT
Sbjct:   661 RRDQRQMEEEEEMWFNEEDDFTE-EIDT 687
GO:0007391 "dorsal closure" evidence=IMP
GO:0016601 "Rac protein signal transduction" evidence=IGI
GO:0006281 "DNA repair" evidence=IMP
GO:0006911 "phagocytosis, engulfment" evidence=IMP
GO:0005737 "cytoplasm" evidence=IDA
GO:0007405 "neuroblast proliferation" evidence=IMP
GO:0005515 "protein binding" evidence=IPI
GO:0008105 "asymmetric protein localization" evidence=IMP
GO:0005634 "nucleus" evidence=IDA
GO:0055059 "asymmetric neuroblast division" evidence=IMP
UNIPROTKB|Q5MIZ7 SMEK2 "Serine/threonine-protein phosphatase 4 regulatory subunit 3B" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1NNI1 SMEK2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F6R1L1 SMEK1 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|G3V5Z3 SMEK1 "Uncharacterized protein" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1SD90 SMEK1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
MGI|MGI:1915984 Smek1 "SMEK homolog 1, suppressor of mek1 (Dictyostelium)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
MGI|MGI:2144474 Smek2 "SMEK homolog 2, suppressor of mek1 (Dictyostelium)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1NPW9 SMEK1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1SQL1 SMEK2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q922R5P4R3B_MOUSENo assigned EC number0.51370.81330.4463yesN/A
Q6DFT3PP4R3_XENTRNo assigned EC number0.51420.78440.4304yesN/A
Q9VFS5PP4R3_DROMENo assigned EC number0.54490.780.3581yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query450
pfam04802193 pfam04802, SMK-1, Component of IIS longevity pathw 9e-10
>gnl|CDD|147119 pfam04802, SMK-1, Component of IIS longevity pathway SMK-1 Back     alignment and domain information 
 Score = 57.6 bits (140), Expect = 9e-10
 Identities = 22/46 (47%), Positives = 35/46 (76%)

Query: 4   KDLLHLLMEENTNELRRRDLALFLREYCQFSQNLQPQAKENFYKTL 49
           ++L  LL + +T++ RRRDL LFL E+C  +++LQPQ++  F+KTL
Sbjct: 148 EELFALLTDSSTSDERRRDLVLFLHEFCNIAKSLQPQSRSTFFKTL 193

SMK-1 is a component of the IIs longevity pathway which regulates aging in C.elegans. Specifically, SMK-1 influences DAF-16-dependant regulation of the aging process by regulating the transcriptional specificity of DAF-16 activity. SMK-1 plays a role in longevity by modulating the transcriptional specificity of DAF-16. Length = 193

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 450
KOG2175|consensus458 100.0
KOG2175|consensus458 96.97
PF10508503 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; 96.83
KOG0166|consensus514 95.5
PF01602526 Adaptin_N: Adaptin N terminal region; InterPro: IP 95.21
KOG2160|consensus342 95.1
PTZ00429 746 beta-adaptin; Provisional 94.77
PF10508503 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; 93.66
cd00020120 ARM Armadillo/beta-catenin-like repeats. An approx 92.88
PF12460415 MMS19_C: RNAPII transcription regulator C-terminal 90.9
PF12348228 CLASP_N: CLASP N terminal; InterPro: IPR024395 Thi 90.07
PF01602526 Adaptin_N: Adaptin N terminal region; InterPro: IP 89.94
KOG1062|consensus 866 87.14
PF03224312 V-ATPase_H_N: V-ATPase subunit H; InterPro: IPR004 85.94
PF08569335 Mo25: Mo25-like; InterPro: IPR013878 Mo25-like pro 85.22
KOG0166|consensus514 82.44
cd00020120 ARM Armadillo/beta-catenin-like repeats. An approx 80.78
>KOG2175|consensus Back     alignment and domain information 
Probab=100.00  E-value=2.2e-62  Score=505.16  Aligned_cols=295  Identities=53%  Similarity=0.859  Sum_probs=283.4

Q ss_pred             HHHHHHhhcCCCcchHhhHHHHHHHHHHHHhhhcCCchhHHHHHHHHHhCCCHHHHHHHHhCCChhhHHHHHHHHHHHHh
Q psy10039          3 EKDLLHLLMEENTNELRRRDLALFLREYCQFSQNLQPQAKENFYKTLSSLGILPALEVVLSAEDIATKNAAIDILNFIIE   82 (450)
Q Consensus         3 ~~eLF~~l~~~~~~~~~rrd~v~FL~q~c~laK~LQ~~~r~~ff~~Lv~~GL~~vi~~~L~~~d~~ir~~atdIL~~iie   82 (450)
                      ..|||+++++++++.++|+++|.|+||||+++|+||++.|.+||++|++.|||++++++++++|.++|.++|||+..++|
T Consensus       163 l~eLf~~l~~~~t~~qkr~~li~~lke~c~~s~~L~~~~~~~~fkTlv~~~i~~~le~~~~~~d~~~r~~~~di~~~~ve  242 (458)
T KOG2175|consen  163 LIELFARLRSESTDDQKRDDLVHFLKEFCSFSKALQPQSRDAFFKTLVNKGILDALEYVLKMPDTQVRSAATDILARLVE  242 (458)
T ss_pred             HHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhcCcchhhHHHHHHHHhhhHHHHHHHhcCCcchhhHHHHHHHHHHHh
Confidence            56999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hChhHHHHHHHHhhhhcccCCCcccHHHHHHHHhhcCCCcchhHHHHHHHHHHHhcCCCCCCccCCchhHHHHHHHHHhh
Q psy10039         83 FSPSFIRDYTLQQAACISREEQDPMLVNVIIEQMVSDTDPELGRAVQLMSILKILIDPDNMLSSINKTEKCEFLNYFYKY  162 (450)
Q Consensus        83 ~dp~lvR~~~~~q~~~~s~~e~~~~Ll~~Li~~ll~d~d~~LG~~~Ql~eaLk~LLDp~~m~~~~~~~e~~~fl~~FY~~  162 (450)
                      ++|+|+|++.++++.   ...++.+++++++++|++|.||++|..+|++.++++||||++|.+.+  .++.+|+++||++
T Consensus       243 ~~~~~i~~~~~~~~~---~~~~~~~~~nl~~s~~l~d~d~~~~~~s~~~~i~~tll~~~~~~~~~--~~~se~l~~~~~~  317 (458)
T KOG2175|consen  243 MSPSMIRSFTLGEAL---DPDDEKLLLNLAISHMLEDFDPELSGASQLMLILSTLLDPENMLTLA--SEKSEFLNFFYKH  317 (458)
T ss_pred             cCHHHHHHHHHHhhc---CchhhHHHHHHHHHhhccccCccccchHHHHHHHHHhhCccccCCcc--chhHHHhhhhhcc
Confidence            999999999999986   33367889999999999999999999999999999999999999744  6899999999999


Q ss_pred             hHHHhccccccCCCCCcccccccchHHHHHHHHHHHHHHHhhccchhhhhhhhhhHHHHHHHhhccCCcchhHHHHHHHH
Q psy10039        163 SIHLLMDPLLDNTKKDEVQVDSYHNAQLLGVILELLSFCVEHHSYHIKNFVLNKDLLRKVLVLMKSCHTFLVLSSLRFMR  242 (450)
Q Consensus       163 ~~~~L~~PL~~~~~~~~~~~~~~~~~~ll~~l~eLL~Fcv~~H~~riK~fil~~~ll~rVl~Ll~~~~K~L~L~AlRf~R  242 (450)
                      |++.+.+|...+++++       +.++.+..++|++|||+.||+|+||+|+++++++++|+.|++++|++|+++|+||.|
T Consensus       318 c~~~~~~p~~~~~~s~-------~sa~~~~v~~~~l~fc~~~~s~si~n~~~~~d~~~~vlvl~~s~~~~l~~~a~~~~~  390 (458)
T KOG2175|consen  318 CMHSLSAPLVGNTSSN-------QSAQNLSVILELLTFCVEHHSFSIKNYIVSSDLLNKVLVLMSSKHSFLVLGALRYLR  390 (458)
T ss_pred             ccccCCCcchhhcccc-------cccchhhhhhhhhhHHHHhcccccccHhhcchhhccceehhccccHHHHHHHHHhhh
Confidence            9999999999887654       567889999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcCChhHHHHHHHhhCchHHHHHHhhhcCCCCcchhhHHHHHHHHHHhhChHHHHHHHHHHhHhhcc
Q psy10039        243 KIIAMKDDFYNRYIIKGHLFQPVIDTFNRNKGRYNLLDSAVLELFEYIKLEDIKVLCSHVVETYGDELE  311 (450)
Q Consensus       243 ~iI~l~Defy~ryiik~nLf~PIl~~f~~n~~R~NLlnSA~LElfe~Ir~eNik~Li~hlve~y~~~l~  311 (450)
                      .++.++|+||+||++|+  |+|+++.|.+||.||||+|||+|+||||||.||+|+|++|+|++||+.++
T Consensus       391 ~~~~L~d~~~~~~ivk~--~~p~~~~~~~n~trynll~s~~l~l~efi~~e~~k~l~~~~v~~~~~~~~  457 (458)
T KOG2175|consen  391 KIPILEDEKYNKYIVKS--FKPVIDGFIENGTRYNLLNSAVLELFEFIRVEDIKPLLSYIVENFQNGLA  457 (458)
T ss_pred             ccchhchHHHHHHHhhc--cccchhhHhhcCChhHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHhhhcc
Confidence            99999999999999999  99999999999999999999999999999999999999999999999875

>KOG2175|consensus Back     alignment and domain information
>PF10508 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; InterPro: IPR019538 The 26S proteasome is an enzymatic complex that degrades ubiquitinated proteins in eukaryotic cells Back     alignment and domain information
>KOG0166|consensus Back     alignment and domain information
>PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment Back     alignment and domain information
>KOG2160|consensus Back     alignment and domain information
>PTZ00429 beta-adaptin; Provisional Back     alignment and domain information
>PF10508 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; InterPro: IPR019538 The 26S proteasome is an enzymatic complex that degrades ubiquitinated proteins in eukaryotic cells Back     alignment and domain information
>cd00020 ARM Armadillo/beta-catenin-like repeats Back     alignment and domain information
>PF12460 MMS19_C: RNAPII transcription regulator C-terminal; InterPro: IPR024687 This domain, approximately 60 amino acids in length, is found in the N-terminal region of MMS19 proteins Back     alignment and domain information
>PF12348 CLASP_N: CLASP N terminal; InterPro: IPR024395 This domain is found in the N-terminal region of CLIP-associated proteins (CLASPs), which are widely conserved microtubule plus-end-tracking proteins that regulate the stability of dynamic microtubules [, ] Back     alignment and domain information
>PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment Back     alignment and domain information
>KOG1062|consensus Back     alignment and domain information
>PF03224 V-ATPase_H_N: V-ATPase subunit H; InterPro: IPR004908 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane Back     alignment and domain information
>PF08569 Mo25: Mo25-like; InterPro: IPR013878 Mo25-like proteins are involved in both polarised growth and cytokinesis Back     alignment and domain information
>KOG0166|consensus Back     alignment and domain information
>cd00020 ARM Armadillo/beta-catenin-like repeats Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query450
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-08
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 61.4 bits (148), Expect = 4e-10
 Identities = 67/391 (17%), Positives = 120/391 (30%), Gaps = 117/391 (29%)

Query: 7   LHLLMEENTNELRRRDLALFLREYCQFSQNLQPQAKENFYKTLSSLGILPALEV----VL 62
           L   ++ N          + LR +      L+   K   Y+    L +L  L V      
Sbjct: 205 LLYQIDPNWTSRSDHSSNIKLRIH-SIQAELRRLLKSKPYEN--CLLVL--LNVQNAKAW 259

Query: 63  SAEDIA------TKNAAI-DILN-------FIIEFSPSFIRDYTLQQ-AACISREEQD-- 105
           +A +++      T+   + D L+        +   S +   D         +    QD  
Sbjct: 260 NAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLP 319

Query: 106 -------PMLVNVI-------------------------IEQMVSDTDPELGRAV----- 128
                  P  +++I                         IE  ++  +P   R +     
Sbjct: 320 REVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLS 379

Query: 129 ----------QLMSIL---KILIDPDNMLSSINKTEKCEFLNYFYKYSIHLLMDPLLDNT 175
                      L+S++    I  D   +++ ++K    E        SI  +    L+  
Sbjct: 380 VFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSI---YLELK 436

Query: 176 KKDEVQ-------VDSY------HNAQLLGVILELLSFCVEHHSYHIKN----------- 211
            K E +       VD Y       +  L+   L+   +   H  +H+KN           
Sbjct: 437 VKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFY--SHIGHHLKNIEHPERMTLFR 494

Query: 212 -------FVLNKDLLRKVLVLMKSCHTFL-VLSSLRFMRKIIAMKDDFYNRYIIKGHLFQ 263
                  F+  K  +R       +  + L  L  L+F +  I   D  Y R +     F 
Sbjct: 495 MVFLDFRFLEQK--IRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFL 552

Query: 264 PVIDTFNRNKGRY-NLLDSAVLELFEYIKLE 293
           P I+  N    +Y +LL  A++   E I  E
Sbjct: 553 PKIEE-NLICSKYTDLLRIALMAEDEAIFEE 582
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query450
4hxt_A252 De novo protein OR329; structural genomics, PSI-bi 98.18
1xqr_A296 HSPBP1 protein; armadillo repeat, superhelical twi 98.04
2jdq_A450 Importin alpha-1 subunit; transport, PB2 subunit, 97.82
4db8_A252 Armadillo-repeat protein; solenoid repeat, de novo 97.76
4b8j_A528 Importin subunit alpha-1A; transport protein, nucl 97.66
1wa5_B530 Importin alpha subunit; nuclear transport/complex, 97.6
2jdq_A450 Importin alpha-1 subunit; transport, PB2 subunit, 97.59
3tpo_A529 Importin subunit alpha-2; nuclear import, protein 97.56
4b8j_A528 Importin subunit alpha-1A; transport protein, nucl 97.54
3ul1_B510 Importin subunit alpha-2; arm repeat, armadillo re 97.53
4hxt_A252 De novo protein OR329; structural genomics, PSI-bi 97.47
1wa5_B530 Importin alpha subunit; nuclear transport/complex, 97.37
4db6_A210 Armadillo repeat protein; solenoid repeat, armadil 97.26
4db6_A210 Armadillo repeat protein; solenoid repeat, armadil 97.23
3tpo_A529 Importin subunit alpha-2; nuclear import, protein 97.18
4db8_A252 Armadillo-repeat protein; solenoid repeat, de novo 97.1
3ul1_B510 Importin subunit alpha-2; arm repeat, armadillo re 96.73
2z6h_A644 Catenin beta-1, beta-catenin; C-terminal domain, a 96.19
4gmo_A 684 Putative uncharacterized protein; ARM, heat, solen 96.08
1jdh_A529 Beta-catenin; beta-catenin, protein-protein comple 96.08
2z6h_A 644 Catenin beta-1, beta-catenin; C-terminal domain, a 96.02
1jdh_A 529 Beta-catenin; beta-catenin, protein-protein comple 95.78
2z6g_A 780 B-catenin; FULL-length, beta-catenin, cell adhesio 95.7
1w63_A618 Adapter-related protein complex 1 gamma 1 subunit; 95.64
3grl_A 651 General vesicular transport factor P115; vesicle t 95.59
2z6g_A 780 B-catenin; FULL-length, beta-catenin, cell adhesio 95.37
1ibr_B462 P95, importin beta-1 subunit, nuclear factor; smal 95.01
3now_A810 UNC-45 protein, SD10334P; armadillo repeat, HSP90, 94.89
3nmw_A354 APC variant protein; ARMADIILO repeats domain, cel 94.64
1w63_A618 Adapter-related protein complex 1 gamma 1 subunit; 94.44
1xqr_A296 HSPBP1 protein; armadillo repeat, superhelical twi 94.14
3nmz_A458 APC variant protein; protein-protein complex, arma 94.03
3b2a_A265 TON_1937, putative uncharacterized protein; heat-r 93.93
1ibr_B462 P95, importin beta-1 subunit, nuclear factor; smal 93.39
1xm9_A457 Plakophilin 1; armadillo repeat, cell adhesion; 2. 92.89
2qk2_A242 LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2 92.61
4fdd_A 852 Transportin-1; heat repeats, karyopherin, nuclear 92.6
1qgr_A 876 Protein (importin beta subunit); transport recepto 92.54
4fdd_A852 Transportin-1; heat repeats, karyopherin, nuclear 92.15
1upk_A341 MO25 protein; transferase, armadillo; HET: MSE; 1. 91.77
3now_A810 UNC-45 protein, SD10334P; armadillo repeat, HSP90, 91.32
3opb_A778 SWI5-dependent HO expression protein 4; heat and a 89.92
2bpt_A 861 Importin beta-1 subunit; nuclear transport, nucleo 89.28
2bpt_A861 Importin beta-1 subunit; nuclear transport, nucleo 88.81
2qk2_A242 LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2 88.65
1u6g_C 1230 TIP120 protein, CAND1; cullin repeat, heat repeat, 88.13
1qgr_A876 Protein (importin beta subunit); transport recepto 87.98
3nmz_A458 APC variant protein; protein-protein complex, arma 87.77
2vgl_A621 Adaptor protein complex AP-2, alpha 2 subunit; cyt 86.59
3nmw_A354 APC variant protein; ARMADIILO repeats domain, cel 86.48
2vgl_B591 AP-2 complex subunit beta-1; cytoplasmic vesicle, 84.35
1u6g_C 1230 TIP120 protein, CAND1; cullin repeat, heat repeat, 83.65
1xm9_A457 Plakophilin 1; armadillo repeat, cell adhesion; 2. 82.09
2vgl_B 591 AP-2 complex subunit beta-1; cytoplasmic vesicle, 81.02
3l6x_A584 Catenin delta-1; catenin, armadillo, ARM, JMD, CE 80.8
3tt9_A233 Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} 80.78
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene} Back     alignment and structure
Probab=98.18  E-value=0.00035  Score=63.70  Aligned_cols=220  Identities=13%  Similarity=0.110  Sum_probs=159.3

Q ss_pred             HHHHHHhhcCCCcchHhhHHHHHHHHHHHHhhhcCCchhHHHHHHHHHhCCCHHHHHHHHhCCChhhHHHHHHHHHHHHh
Q psy10039          3 EKDLLHLLMEENTNELRRRDLALFLREYCQFSQNLQPQAKENFYKTLSSLGILPALEVVLSAEDIATKNAAIDILNFIIE   82 (450)
Q Consensus         3 ~~eLF~~l~~~~~~~~~rrd~v~FL~q~c~laK~LQ~~~r~~ff~~Lv~~GL~~vi~~~L~~~d~~ir~~atdIL~~iie   82 (450)
                      .+.|...+++++  .+-|..++..|..++.-..        ..-+.+++.|.++.+--.|++++..+|..++.+|..+..
T Consensus         4 i~~L~~~L~~~~--~~~~~~a~~~L~~l~~~~~--------~~~~~~~~~g~i~~L~~ll~~~~~~v~~~a~~~L~~l~~   73 (252)
T 4hxt_A            4 VEKLVKLLTSTD--SETQKEAARDLAEIASGPA--------SAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIAS   73 (252)
T ss_dssp             HHHHHHHTTCSC--HHHHHHHHHHHHHHHTSCH--------HHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHcCCC--HHHHHHHHHHHHHHhcCCc--------HHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHc
Confidence            467888888776  6778889888887765432        344567788999999999999999999999999999998


Q ss_pred             hChhHHHHHHHHhhhhcccCCCcccHHHHHHHHhhcCCCcchhHHHHHHHHHHHhcCCCCCCccCCchhHHHHHHHHHhh
Q psy10039         83 FSPSFIRDYTLQQAACISREEQDPMLVNVIIEQMVSDTDPELGRAVQLMSILKILIDPDNMLSSINKTEKCEFLNYFYKY  162 (450)
Q Consensus        83 ~dp~lvR~~~~~q~~~~s~~e~~~~Ll~~Li~~ll~d~d~~LG~~~Ql~eaLk~LLDp~~m~~~~~~~e~~~fl~~FY~~  162 (450)
                      +++...+. +.+..           .+..|++.|- +.++  .++.....+|..|....       ...+..+++   ..
T Consensus        74 ~~~~~~~~-~~~~~-----------~i~~l~~ll~-~~~~--~v~~~a~~~L~~l~~~~-------~~~~~~~~~---~~  128 (252)
T 4hxt_A           74 GPDEAIKA-IVDAG-----------GVEVLVKLLT-STDS--EVQKEAARALANIASGP-------DEAIKAIVD---AG  128 (252)
T ss_dssp             SCHHHHHH-HHHTT-----------HHHHHHHHTT-CSSH--HHHHHHHHHHHHHTTSC-------HHHHHHHHH---TT
T ss_pred             CChHHHHH-HHHCC-----------CHHHHHHHHc-CCCH--HHHHHHHHHHHHHHcCC-------HHHHHHHHH---CC
Confidence            87765443 33322           2555666554 4555  77999999999998421       111222222   23


Q ss_pred             hHHHhccccccCCCCCcccccccchHHHHHHHHHHHHHHHhhccchhhhhhhhhhHHHHHHHhhccCCcchhHHHHHHHH
Q psy10039        163 SIHLLMDPLLDNTKKDEVQVDSYHNAQLLGVILELLSFCVEHHSYHIKNFVLNKDLLRKVLVLMKSCHTFLVLSSLRFMR  242 (450)
Q Consensus       163 ~~~~L~~PL~~~~~~~~~~~~~~~~~~ll~~l~eLL~Fcv~~H~~riK~fil~~~ll~rVl~Ll~~~~K~L~L~AlRf~R  242 (450)
                      .++.|+.-|.+            .+..+....+..|+.+..+++-. +..+...+++..+..++.+.+.-++..|++++.
T Consensus       129 ~i~~L~~~l~~------------~~~~~~~~a~~~L~~l~~~~~~~-~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~  195 (252)
T 4hxt_A          129 GVEVLVKLLTS------------TDSEVQKEAARALANIASGPDEA-IKAIVDAGGVEVLVKLLTSTDSEVQKEAARALA  195 (252)
T ss_dssp             HHHHHHHHTTC------------SCHHHHHHHHHHHHHHTTSCHHH-HHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHH
T ss_pred             CHHHHHHHHcC------------CCHHHHHHHHHHHHHHHcCCHHH-HHHHHHCcCHHHHHHHHCCCCHHHHHHHHHHHH
Confidence            56666544432            11345566777777766655544 346778999999999999988889999999999


Q ss_pred             HHhcCChhHHHHHHHhhCchHHHHHHhhh
Q psy10039        243 KIIAMKDDFYNRYIIKGHLFQPVIDTFNR  271 (450)
Q Consensus       243 ~iI~l~Defy~ryiik~nLf~PIl~~f~~  271 (450)
                      ++.. .+.-..+.+++.+++.+++.++..
T Consensus       196 ~l~~-~~~~~~~~l~~~~~i~~L~~ll~~  223 (252)
T 4hxt_A          196 NIAS-GPTSAIKAIVDAGGVEVLQKLLTS  223 (252)
T ss_dssp             HHTT-SBHHHHHHHHHTTHHHHHHHGGGC
T ss_pred             HHHc-CCHHHHHHHHHCCCHHHHHHHHCC
Confidence            9886 566678889999999999987753
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A* Back     alignment and structure
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A Back     alignment and structure
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} Back     alignment and structure
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A Back     alignment and structure
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A Back     alignment and structure
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A Back     alignment and structure
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B Back     alignment and structure
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A Back     alignment and structure
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ... Back     alignment and structure
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene} Back     alignment and structure
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A Back     alignment and structure
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A Back     alignment and structure
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A Back     alignment and structure
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B Back     alignment and structure
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} Back     alignment and structure
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ... Back     alignment and structure
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens} Back     alignment and structure
>4gmo_A Putative uncharacterized protein; ARM, heat, solenoid, nuclear transport, chaperone, RPL5, RPL KAP104, nucleus; 2.10A {Chaetomium thermophilum var} PDB: 4gmn_A Back     alignment and structure
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A Back     alignment and structure
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens} Back     alignment and structure
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A Back     alignment and structure
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio} Back     alignment and structure
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1 Back     alignment and structure
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A Back     alignment and structure
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio} Back     alignment and structure
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A Back     alignment and structure
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster} Back     alignment and structure
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A Back     alignment and structure
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1 Back     alignment and structure
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A* Back     alignment and structure
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens} Back     alignment and structure
>3b2a_A TON_1937, putative uncharacterized protein; heat-repeats, hypothetical, unknown function; 2.20A {Thermococcus onnurineus} Back     alignment and structure
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A Back     alignment and structure
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24 Back     alignment and structure
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster} Back     alignment and structure
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B* Back     alignment and structure
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A Back     alignment and structure
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B* Back     alignment and structure
>1upk_A MO25 protein; transferase, armadillo; HET: MSE; 1.85A {Homo sapiens} SCOP: a.118.1.15 PDB: 1upl_A 2wtk_A* 3gni_A* Back     alignment and structure
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster} Back     alignment and structure
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae} Back     alignment and structure
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A Back     alignment and structure
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A Back     alignment and structure
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster} Back     alignment and structure
>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A Back     alignment and structure
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A Back     alignment and structure
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens} Back     alignment and structure
>2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A Back     alignment and structure
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A Back     alignment and structure
>2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B Back     alignment and structure
>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A Back     alignment and structure
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24 Back     alignment and structure
>2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B Back     alignment and structure
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A Back     alignment and structure
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query450
d1q1sc_434 Importin alpha {Mouse (Mus musculus) [TaxId: 10090 97.98
d1xqra1264 Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi 97.82
d1wa5b_503 Karyopherin alpha {Baker's yeast (Saccharomyces ce 97.68
d1wa5b_503 Karyopherin alpha {Baker's yeast (Saccharomyces ce 97.61
d1q1sc_434 Importin alpha {Mouse (Mus musculus) [TaxId: 10090 97.59
d1xm9a1457 Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} 96.19
d1jdha_529 beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} 95.47
d1jdha_ 529 beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} 95.33
d1xqra1264 Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi 94.57
d1ibrb_458 Importin beta {Human (Homo sapiens) [TaxId: 9606]} 94.53
d2vgla_584 Adaptin alpha C subunit N-terminal fragment {Mouse 94.3
d2bpta1 861 Importin beta {Baker's yeast (Saccharomyces cerevi 94.06
d1upka_330 Mo25 protein {Human (Homo sapiens) [TaxId: 9606]} 91.62
d2bpta1 861 Importin beta {Baker's yeast (Saccharomyces cerevi 89.97
d1u6gc_1207 Cullin-associated NEDD8-dissociated protein 1 (Tip 87.55
d2vglb_579 Adaptin beta subunit N-terminal fragment {Human (H 87.54
d1b3ua_588 Constant regulatory domain of protein phosphatase 83.52
d2vglb_579 Adaptin beta subunit N-terminal fragment {Human (H 80.02
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: Armadillo repeat
domain: Importin alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.98  E-value=0.00019  Score=68.12  Aligned_cols=238  Identities=12%  Similarity=0.138  Sum_probs=149.2

Q ss_pred             hHHHHHHhhcCCCcchHhhHHHHHHHHHHHHhhhcCCchhHHHHHHHHHhCCCHHHHHHHHhCC-ChhhHHHHHHHHHHH
Q psy10039          2 AEKDLLHLLMEENTNELRRRDLALFLREYCQFSQNLQPQAKENFYKTLSSLGILPALEVVLSAE-DIATKNAAIDILNFI   80 (450)
Q Consensus         2 ~~~eLF~~l~~~~~~~~~rrd~v~FL~q~c~laK~LQ~~~r~~ff~~Lv~~GL~~vi~~~L~~~-d~~ir~~atdIL~~i   80 (450)
                      +.++|...++++  +.+.+..++.-|+.+.+..++  + ..    ..+++.|+++.+--.|++. ++.+|..|+.+|..+
T Consensus        14 ~i~~lv~~l~s~--~~~~~~~a~~~l~~l~s~~~~--~-~~----~~i~~~g~i~~Lv~lL~~~~~~~v~~~a~~~L~~l   84 (434)
T d1q1sc_          14 SVEDIVKGINSN--NLESQLQATQAARKLLSREKQ--P-PI----DNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNI   84 (434)
T ss_dssp             CHHHHHHHHTSS--CHHHHHHHHHHHHHHHHSSSC--C-CH----HHHHHTTCHHHHHHHTTCGGGHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHcCC--CHHHHHHHHHHHHHHhcCCCC--c-hH----HHHHHCCCHHHHHHHHccCCCHHHHHHHHHHHHHH
Confidence            567899998887  567777787777776443333  2 12    3577889999999999765 678999999999999


Q ss_pred             HhhChhHHHHHHHHhhhhcccCCCcccHHHHHHHHhhcCCCcchhHHHHHHHHHHHhcCC-CCC---C-c----------
Q psy10039         81 IEFSPSFIRDYTLQQAACISREEQDPMLVNVIIEQMVSDTDPELGRAVQLMSILKILIDP-DNM---L-S----------  145 (450)
Q Consensus        81 ie~dp~lvR~~~~~q~~~~s~~e~~~~Ll~~Li~~ll~d~d~~LG~~~Ql~eaLk~LLDp-~~m---~-~----------  145 (450)
                      ..+++...+..+ ...           .+..|++.| ...++  .++.+.+.+|..|... +..   . .          
T Consensus        85 a~~~~~~~~~i~-~~~-----------~i~~l~~~L-~~~~~--~~~~~a~~~L~nl~~~~~~~~~~i~~~~~~~~l~~~  149 (434)
T d1q1sc_          85 ASGTSEQTKAVV-DGG-----------AIPAFISLL-ASPHA--HISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLAL  149 (434)
T ss_dssp             HTSCHHHHHHHH-HTT-----------HHHHHHHHT-TCSCH--HHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHH
T ss_pred             hcCChhhhhHhh-hcc-----------chhhhhhcc-ccCCH--HHHHHHHHHHHHHhccchHHHHHHHHhhhhhHHHHH
Confidence            988887665543 221           255566654 33344  5577888887766532 110   0 0          


Q ss_pred             --cCCc-hhHHHHHHHHHhhhHHHhccccccCCCCCcc-c-----------ccccchHHHHHHHHHHHHHHHhhccchhh
Q psy10039        146 --SINK-TEKCEFLNYFYKYSIHLLMDPLLDNTKKDEV-Q-----------VDSYHNAQLLGVILELLSFCVEHHSYHIK  210 (450)
Q Consensus       146 --~~~~-~e~~~fl~~FY~~~~~~L~~PL~~~~~~~~~-~-----------~~~~~~~~ll~~l~eLL~Fcv~~H~~riK  210 (450)
                        .... ......+...     -+.+.-+......... .           -....+..+....|-.|+.+..++..+ +
T Consensus       150 l~~~~~~~~~~~~~~~~-----~~~l~~~~~~~~~~~~~~~~~~~l~~l~~ll~~~~~~~~~~a~~~l~~l~~~~~~~-~  223 (434)
T d1q1sc_         150 LAVPDLSTLACGYLRNL-----TWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGPNER-I  223 (434)
T ss_dssp             TCSSCGGGSCHHHHHHH-----HHHHHHHTCCCTTCCCHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTSSCHHH-H
T ss_pred             HHhcccccchHHHHHHH-----HHHHHHHhhcccccchhhhhhhHHHHHHHHHhccccchhhhHHhhhcccchhhhhh-H
Confidence              0000 0000011000     0000000000000000 0           001123455666777777776665544 4


Q ss_pred             hhhhhhhHHHHHHHhhccCCcchhHHHHHHHHHHhcCChhHHHHHHHhhCchHHHHHHhh
Q psy10039        211 NFVLNKDLLRKVLVLMKSCHTFLVLSSLRFMRKIIAMKDDFYNRYIIKGHLFQPVIDTFN  270 (450)
Q Consensus       211 ~fil~~~ll~rVl~Ll~~~~K~L~L~AlRf~R~iI~l~Defy~ryiik~nLf~PIl~~f~  270 (450)
                      ..+...+++..+..+++..+.-++..|+++++.+.. .++.+..++++.+.+.+++.++.
T Consensus       224 ~~~~~~~~~~~Lv~ll~~~~~~~~~~al~~l~~l~~-~~~~~~~~~~~~~~~~~l~~ll~  282 (434)
T d1q1sc_         224 EMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVT-GTDEQTQKVIDAGALAVFPSLLT  282 (434)
T ss_dssp             HHHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTT-SCHHHHHHHHHTTGGGGHHHHTT
T ss_pred             HHHhhcccchhcccccccchhhhhhchhhhhhhHHh-hhhHHHHHHHhccccchHHHhhc
Confidence            467788999999999999998999999999998775 56678889999999999999875
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1upka_ a.118.1.15 (A:) Mo25 protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure