Psyllid ID: psy10062

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-----
LPIWNYDGSSTYQSEGSNSDTFLHPVAIFKDPFRLGNNILMSHGVLGNSPNAAMNKTVLDKYLALPVPADKIQATYIWIDGTGEGIRAKDRTLTGVVKNVSGRPDQVYYLIMSHGVLGNSPNAAMNKTVLDKYLALPVPADKIQATYIWIDGTGEGIRAKCSQLPLLRKGPYYCGVGANKVYARDIVEAHYRACLYAGIEISGTNAEGPYYCGVGANKVYARDIVEAHYRACLYAGIEISGTNAEVMPSQWEFQDIAKCQDLPIWNYDGSSTYQSEMREDNGIIEIEKAIDKLSKQHLRHIQAYDPKQGKDNERRLTGKHETSSIHDFSAGVANRGASIRIPRDCAEQKKGYLEDRRVANRGASIRIPRDCAEQKKGYLEDRRPSSNCDPYSVTEALIRTCVLNE
ccccccccccccccccccccEEEEEEEEEcccccccccEEEEEccccccccccccHHHHHHHHccccccccEEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccEEEEccccccccccEEEEEEEcccccccccccccccccccccccccccccccEEEEEEccccccccccccccccccccccccEEEEccccHHHHHHHHHHHHHHHHHccccEEEEccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcHHHHHHHcccccccccccccccccccccccccEEEEcccccEEEEccccccccccccccccccccccccccHHHHHHHcccccccccccccccHHHHHHHHHHHHcccc
cccEccccccccccccccccEEEEEEEEccccccccccEEEEEEHccccccccccHHHHHHHHcccccccEEEEEEEEEEcccccccccccccccccccHHHcccEccccccccccccccccEEEEEEEEccccccccccEEEEEEEEcccccccccHHHHHHHHHHHcccccccccEEEEEEEcccccccccccccccccccccccccEEEccccccEcHHHHHHHHHHHHHHccEEEEccccEEccccEEEEEEEEcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccHHccccccccccccccccEcccccEEEEcccHHHccccccccccccccccEEEcccccHHHHcccccccccccccccHHHHHHHHHHEEccc
lpiwnydgsstyqsegsnsdtflhpvaifkdpfrlgnnilmshgvlgnspnaamnKTVLDKylalpvpadkiqatyiwidgtgegirakdrtltgvvknvsgrpdQVYYLIMSHgvlgnspnaamnKTVLDKylalpvpadkiqatyiwidgtgegirakcsqlpllrkgpyycgvgankvYARDIVEAHYRACLYAGieisgtnaegpyycgvgankVYARDIVEAHYRACLYAGieisgtnaevmpsqwefqdiakcqdlpiwnydgsstyqsemredngIIEIEKAIDKLSKQHLRHIqaydpkqgkdnerrltgkhetssihdfsagvanrgasiriprdcAEQKkgyledrrvanrgasiriprdcaeqkkgyledrrpssncdpysvTEALIRTCVLNE
lpiwnydgsstyqsegsnsDTFLHPVAIFKDPFRLGNNILMSHGVLGNSPNAAMNKTVLDKYLALPVPADKIQATYIWIDGtgegirakdrtltgvvknvsgrpDQVYYLIMSHGVLGNSPNAAMNKTVLDKYLALPVPADKIQATYIWIDGTGEGIRAKCSQLPLLRKGPYYCGVGANKVYARDIVEAHYRACLYAGIEISGTNAEGPYYCGVGANKVYARDIVEAHYRACLYAGIEISGTNAEVMPSQWEFQDIAKCQDLPIWNYDGSSTYQSEMREDNGIIEIEKAIDKLSKQHLRHiqaydpkqgkdneRRLTGkhetssihdfsagvanrgasiriprDCAEqkkgyledrrvanrgasiriprdcaeqkkgyledrrpssncdpysvtealirtcvlne
LPIWNYDGSSTYQSEGSNSDTFLHPVAIFKDPFRLGNNILMSHGVLGNSPNAAMNKTVLDKYLALPVPADKIQATYIWIDGTGEGIRAKDRTLTGVVKNVSGRPDQVYYLIMSHGVLGNSPNAAMNKTVLDKYLALPVPADKIQATYIWIDGTGEGIRAKCSQLPLLRKGPYYCGVGANKVYARDIVEAHYRACLYAGIEISGTNAEGPYYCGVGANKVYARDIVEAHYRACLYAGIEISGTNAEVMPSQWEFQDIAKCQDLPIWNYDGSSTYQSEMREDNGIIEIEKAIDKLSKQHLRHIQAYDPKQGKDNERRLTGKHETSSIHDFSAGVANRGASIRIPRDCAEQKKGYLEDRRVANRGASIRIPRDCAEQKKGYLEDRRPSSNCDPYSVTEALIRTCVLNE
********************TFLHPVAIFKDPFRLGNNILMSHGVLGNSPNAAMNKTVLDKYLALPVPADKIQATYIWIDGTGEGIRAKDRTLTGVVKNVSGRPDQVYYLIMSHGVLGNSPNAAMNKTVLDKYLALPVPADKIQATYIWIDGTGEGIRAKCSQLPLLRKGPYYCGVGANKVYARDIVEAHYRACLYAGIEISGTNAEGPYYCGVGANKVYARDIVEAHYRACLYAGIEISGTNAEVMPSQWEFQDIAKCQDLPIWNYDGSSTY********GIIEIEKAID***************************************************************************************************YSVTEALIRTCV***
LPIWNYDGSSTY***GSNSDTFLHPVAIFKDPFRLGNNILMSHGVLGNSPNAAMNKTVLDKYLALPVPADKIQATYIWIDGTGEGIRAKDRTLTGVVKNVSGRPDQVYYLIMSHGVLGNSPNAAMNKTVLDKYLALPVPADKIQATYIWIDGTGEGIRAKCSQLPLLRKGPYYCGVGANKVYARDIVEAHYRACLYAGIEISGTNAEGPYYCGVGANKVYARDIVEAHYRACLYAGIEISGTNAEVMPSQWEFQDIAKCQDLPIWNYDGSSTYQSEMREDNGIIEIEKAIDKLSKQHLRHIQAYDPKQGKDNERRLTGKHETSSIHDFSAGVANRGASIRIPRDCAEQKKGYLEDRRVANRGASIRIPRDCAEQKKGYLEDRRPSSNCDPYSVTEALIRTCVLNE
LPIWNY**********SNSDTFLHPVAIFKDPFRLGNNILMSHGVLGNSPNAAMNKTVLDKYLALPVPADKIQATYIWIDGTGEGIRAKDRTLTGVVKNVSGRPDQVYYLIMSHGVLGNSPNAAMNKTVLDKYLALPVPADKIQATYIWIDGTGEGIRAKCSQLPLLRKGPYYCGVGANKVYARDIVEAHYRACLYAGIEISGTNAEGPYYCGVGANKVYARDIVEAHYRACLYAGIEISGTNAEVMPSQWEFQDIAKCQDLPIWNYDGSSTYQSEMREDNGIIEIEKAIDKLSKQHLRHIQAYDPKQGKDNERRLTGKHETSSIHDFSAGVANRGASIRIPRDCAEQKKGYLEDRRVANRGASIRIPRDCAEQKKGYLEDRRPSSNCDPYSVTEALIRTCVLNE
*PIWNYDGSST*****SNSDTFLHPVAIFKDPFRLGNNILMSHGVLGNSPNAAMNKTVLDKYLALPVPADKIQATYIWIDGTGEGIRAKDRTLTGVVKNVSGRPDQVYYLIMS****GNSPNAAMNKTVLDKYLALPVPADKIQATYIWIDGTGEGIRAKCSQLPLLRKGPYYCGVGANKVYARDIVEAHYRACLYAGIEISGTNAEGPYYCGVGANKVYARDIVEAHYRACLYAGIEISGTNAEVMPSQWEFQDIAKCQDLPIWNYDGSSTYQSEMREDNGIIEIEKAIDKLSKQHLRHIQAYDPKQGKDNERRLTGKHETSSIHDFSAGVANRGASIRIPRDCAEQKKGYLEDRRVANRGASIRIPRDCAEQKKGYLEDRRPSSNCDPYSVTEALIRTCVLNE
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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LPIWNYDGSSTYQSEGSNSDTFLHPVAIFKDPFRLGNNILMSHGVLGNSPNAAMNKTVLDKYLALPVPADKIQATYIWIDGTGEGIRAKDRTLTGVVKNVSGRPDQVYYLIMSHGVLGNSPNAAMNKTVLDKYLALPVPADKIQATYIWIDGTGEGIRAKCSQLPLLRKGPYYCGVGANKVYARDIVEAHYRACLYAGIEISGTNAEGPYYCGVGANKVYARDIVEAHYRACLYAGIEISGTNAEVMPSQWEFQDIAKCQDLPIWNYDGSSTYQSEMREDNGIIEIEKAIDKLSKQHLRHIQAYDPKQGKDNERRLTGKHETSSIHDFSAGVANRGASIRIPRDCAEQKKGYLEDRRVANRGASIRIPRDCAEQKKGYLEDRRPSSNCDPYSVTEALIRTCVLNE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query405 2.2.26 [Sep-21-2011]
P20477399 Glutamine synthetase 1, m yes N/A 0.834 0.847 0.419 8e-71
P20478369 Glutamine synthetase 2 cy no N/A 0.738 0.810 0.4 1e-70
Q04831361 Glutamine synthetase OS=P N/A N/A 0.760 0.853 0.435 3e-69
Q4R7U3374 Glutamine synthetase OS=M N/A N/A 0.804 0.871 0.414 2e-68
Q8HZM5373 Glutamine synthetase OS=C yes N/A 0.765 0.831 0.414 4e-68
P15104373 Glutamine synthetase OS=H yes N/A 0.765 0.831 0.409 2e-66
P16580373 Glutamine synthetase OS=G yes N/A 0.797 0.865 0.405 2e-66
P15103373 Glutamine synthetase OS=B yes N/A 0.723 0.785 0.393 1e-62
P41320403 Glutamine synthetase, mit N/A N/A 0.802 0.806 0.391 3e-62
P46410373 Glutamine synthetase OS=S yes N/A 0.718 0.780 0.391 6e-62
>sp|P20477|GLNA1_DROME Glutamine synthetase 1, mitochondrial OS=Drosophila melanogaster GN=Gs1 PE=2 SV=3 Back     alignment and function desciption
 Score =  267 bits (683), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 172/410 (41%), Positives = 220/410 (53%), Gaps = 72/410 (17%)

Query: 33  FRLGNNILMSHGVLGNSPNAAMNKTVLDKYLALPVPADKIQATYIWIDGTGEGIRAKDRT 92
            R GN        L NSPN A++K++L +Y  L  PA+++QATY+WIDGTGE IR KDR 
Sbjct: 25  LRTGNT--TRSQFLANSPNTALDKSILQRYRNLETPANRVQATYLWIDGTGENIRLKDRV 82

Query: 93  LTGVVKNVSGRPDQVYYLIMSHGVLGNSPNAAMNKTVLDKYLALPVPADKIQATYIW-ID 151
           L  V  +V   PD  Y    ++   G + +  +    + +    P   D I     +  D
Sbjct: 83  LDKVPSSVEDLPDWQYDGSSTYQAHGENSDTTLKPRAIYRDPFKPGKNDVIVLCDTYSAD 142

Query: 152 G--TGEGIRAKC-SQLPLLR-KGPYYCGVGANKVYARDIVEAHYRACLYAGIEISGTNAE 207
           G  T    RA   + + L+  + P++   G  + Y    V+       +   E      +
Sbjct: 143 GKPTASNKRAAFQAAIDLISDQEPWF---GIEQEYTLLDVDGR----PFGWPENGFPAPQ 195

Query: 208 GPYYCGVGANKVYARDIVEAHYRACLYAGIEISGTNAEVMPSQWEFQ----DIAKCQDLP 263
           GPYYCGVGA++VYARD+VEAH  ACLYAGI+ +GTNAEVMP+QWEFQ     I  C DL 
Sbjct: 196 GPYYCGVGADRVYARDLVEAHVVACLYAGIDFAGTNAEVMPAQWEFQIGPAGIKACDDLW 255

Query: 264 I--------------------------WNYDGSSTYQS--EMREDNGIIEIEKAIDKLSK 295
           +                          WN  G+ T  S  EMR D GI  IE+AI+KLSK
Sbjct: 256 VSRYILQRIAEEYGVVVTFDPKPMEGQWNGAGAHTNFSTKEMRADGGIKAIEEAIEKLSK 315

Query: 296 QHLRHIQAYDPKQGKDNERRLTGKHETSSIHDFSAGVANRGASIRIPRDCAEQKKGYLED 355
           +H RHI+AYDPK+GKDNERRL G+ ETSSI  FS GVANR  S+R+PR  A   KGY   
Sbjct: 316 RHERHIKAYDPKEGKDNERRLVGRLETSSIDKFSWGVANRAVSVRVPRGVATAGKGY--- 372

Query: 356 RRVANRGASIRIPRDCAEQKKGYLEDRRPSSNCDPYSVTEALIRTCVLNE 405
                                  LEDRRPSSNCDPY+V  A++RTC+LNE
Sbjct: 373 -----------------------LEDRRPSSNCDPYAVCNAIVRTCLLNE 399

Drosophila melanogaster (taxid: 7227)
EC: 6EC: .EC: 3EC: .EC: 1EC: .EC: 2
>sp|P20478|GLNA2_DROME Glutamine synthetase 2 cytoplasmic OS=Drosophila melanogaster GN=Gs2 PE=2 SV=3 Back     alignment and function description
>sp|Q04831|GLNA_PANAR Glutamine synthetase OS=Panulirus argus PE=2 SV=1 Back     alignment and function description
>sp|Q4R7U3|GLNA_MACFA Glutamine synthetase OS=Macaca fascicularis GN=GLUL PE=2 SV=3 Back     alignment and function description
>sp|Q8HZM5|GLNA_CANFA Glutamine synthetase OS=Canis familiaris GN=GLUL PE=1 SV=3 Back     alignment and function description
>sp|P15104|GLNA_HUMAN Glutamine synthetase OS=Homo sapiens GN=GLUL PE=1 SV=4 Back     alignment and function description
>sp|P16580|GLNA_CHICK Glutamine synthetase OS=Gallus gallus GN=GLUL PE=1 SV=1 Back     alignment and function description
>sp|P15103|GLNA_BOVIN Glutamine synthetase OS=Bos taurus GN=GLUL PE=2 SV=4 Back     alignment and function description
>sp|P41320|GLNA_SQUAC Glutamine synthetase, mitochondrial OS=Squalus acanthias PE=2 SV=1 Back     alignment and function description
>sp|P46410|GLNA_PIG Glutamine synthetase OS=Sus scrofa GN=GLUL PE=2 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query405
359843246370 glutamine synthetase [Schistocerca grega 0.822 0.9 0.475 6e-84
332372941369 unknown [Dendroctonus ponderosae] 0.785 0.861 0.466 1e-81
380016995404 PREDICTED: glutamine synthetase 2 cytopl 0.782 0.784 0.459 1e-79
332025206404 Glutamine synthetase 2 cytoplasmic [Acro 0.797 0.799 0.458 3e-79
91079628369 PREDICTED: similar to AGAP002355-PA [Tri 0.659 0.723 0.467 4e-79
380016993368 PREDICTED: glutamine synthetase 2 cytopl 0.775 0.853 0.460 8e-79
307200200404 Glutamine synthetase 2 cytoplasmic [Harp 0.790 0.792 0.461 1e-78
237874151370 glutamine synthetase 2 [Acyrthosiphon pi 0.819 0.897 0.438 4e-77
242007302368 glutamine synthetase 2 cytoplasmic, puta 0.797 0.877 0.459 4e-76
340718427369 PREDICTED: glutamine synthetase 2 cytopl 0.659 0.723 0.472 8e-76
>gi|359843246|gb|AEV89758.1| glutamine synthetase [Schistocerca gregaria] Back     alignment and taxonomy information
 Score =  317 bits (812), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 191/402 (47%), Positives = 238/402 (59%), Gaps = 69/402 (17%)

Query: 41  MSHGVLGNSPNAAMNKTVLDKYLALPVPADKIQATYIWIDGTGEGIRAKDRTLTGVVKNV 100
           M+   L  SPNA + KTVL+KY+ LP P +K+QATYIWIDGTGE +RAKDRTL  + K++
Sbjct: 1   MAMETLAQSPNARICKTVLEKYMRLPQPDNKVQATYIWIDGTGENLRAKDRTLPSLPKSI 60

Query: 101 SGRPDQVYYLIMSHGVLGNSPNAAMNKTVLDKYLALPVPADKIQATYIWI---DGTGEGI 157
              P   Y    ++   G++ +  ++   + K    P   + +     +    + T    
Sbjct: 61  KDYPIWNYDGSSTYQSEGHNSDLYLHPVAVYKDPFRPGAENVLVLCDTYKPNKEPTESNK 120

Query: 158 RAKCSQLPLLRKGPYYCGVGANKVYARDIVEAHYRACLYAGIEISGTNAEGPYYCGVGAN 217
           R KC +  + R   +    G  + Y     + H       G        +GPYYCGVGAN
Sbjct: 121 RYKCLEA-MERAAAHKPWFGIEQEYTLLDTDLHPFGWPKNGF----PGPQGPYYCGVGAN 175

Query: 218 KVYARDIVEAHYRACLYAGIEISGTNAEVMPSQWEFQ----DIAKCQDLPIW-------- 265
           KVYAR++VEAHYRACLYAGI+I+GTNAEVMP+QWEFQ    +  KC D  +W        
Sbjct: 176 KVYARELVEAHYRACLYAGIDIAGTNAEVMPAQWEFQVGPGEGMKCAD-DLWVARYILHR 234

Query: 266 ------------------NYDGSSTYQS----EMREDNGIIEIEKAIDKLSKQHLRHIQA 303
                             N++G+  + +    EMRE+NGIIEIEKAIDKLSKQHLRHIQA
Sbjct: 235 ISEEYGIVVTLDPKPMPGNWNGAGAHCNFSTLEMREENGIIEIEKAIDKLSKQHLRHIQA 294

Query: 304 YDPKQGKDNERRLTGKHETSSIHDFSAGVANRGASIRIPRDCAEQKKGYLEDRRVANRGA 363
           YDPK GKDNERRLTG HETSSIH+FSAGVANRGASIRIPR+ AE+K+GY           
Sbjct: 295 YDPKGGKDNERRLTGAHETSSIHNFSAGVANRGASIRIPREVAERKQGY----------- 343

Query: 364 SIRIPRDCAEQKKGYLEDRRPSSNCDPYSVTEALIRTCVLNE 405
                          LEDRRPSSNCDPY+V EAL+RTCVLNE
Sbjct: 344 ---------------LEDRRPSSNCDPYAVCEALVRTCVLNE 370

Source: Schistocerca gregaria

Species: Schistocerca gregaria

Genus: Schistocerca

Family: Acrididae

Order: Orthoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|332372941|gb|AEE61612.1| unknown [Dendroctonus ponderosae] Back     alignment and taxonomy information
>gi|380016995|ref|XP_003692452.1| PREDICTED: glutamine synthetase 2 cytoplasmic-like isoform 2 [Apis florea] Back     alignment and taxonomy information
>gi|332025206|gb|EGI65384.1| Glutamine synthetase 2 cytoplasmic [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|91079628|ref|XP_967731.1| PREDICTED: similar to AGAP002355-PA [Tribolium castaneum] gi|270003374|gb|EEZ99821.1| hypothetical protein TcasGA2_TC002601 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|380016993|ref|XP_003692451.1| PREDICTED: glutamine synthetase 2 cytoplasmic-like isoform 1 [Apis florea] Back     alignment and taxonomy information
>gi|307200200|gb|EFN80494.1| Glutamine synthetase 2 cytoplasmic [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|237874151|ref|NP_001153848.1| glutamine synthetase 2 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|242007302|ref|XP_002424480.1| glutamine synthetase 2 cytoplasmic, putative [Pediculus humanus corporis] gi|212507898|gb|EEB11742.1| glutamine synthetase 2 cytoplasmic, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|340718427|ref|XP_003397669.1| PREDICTED: glutamine synthetase 2 cytoplasmic-like isoform 2 [Bombus terrestris] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query405
FB|FBgn0001145369 Gs2 "Glutamine synthetase 2" [ 0.6 0.658 0.454 8.2e-81
MGI|MGI:95739373 Glul "glutamate-ammonia ligase 0.422 0.458 0.549 5.4e-59
RGD|2710373 Glul "glutamate-ammonia ligase 0.422 0.458 0.549 2.9e-58
UNIPROTKB|P16580373 GLUL "Glutamine synthetase" [G 0.469 0.509 0.517 4.8e-58
UNIPROTKB|F1NQC3373 GLUL "Glutamine synthetase" [G 0.422 0.458 0.549 6.1e-58
UNIPROTKB|P15103373 GLUL "Glutamine synthetase" [B 0.422 0.458 0.549 3.3e-57
UNIPROTKB|D0G6X5373 GLUL "Glutamine synthetase" [S 0.422 0.458 0.549 3.3e-57
UNIPROTKB|Q8HZM5373 GLUL "Glutamine synthetase" [C 0.422 0.458 0.544 5.4e-57
UNIPROTKB|P46410373 GLUL "Glutamine synthetase" [S 0.422 0.458 0.549 5.4e-57
ZFIN|ZDB-GENE-030131-8417372 glulb "glutamate-ammonia ligas 0.422 0.459 0.514 1.8e-56
FB|FBgn0001145 Gs2 "Glutamine synthetase 2" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 481 (174.4 bits), Expect = 8.2e-81, Sum P(3) = 8.2e-81
 Identities = 126/277 (45%), Positives = 159/277 (57%)

Query:    96 VVKNVSGRPDQVYYLIMSHGVLGNSPNAAMNKTVLD--KYLALPVPADKIQATYIWIDGT 153
             + K+   R + +  +  ++   G   +    KT L+     A   P   I+  Y ++D  
Sbjct:    90 IYKDPFRRGNNILVMCDTYKFDGTPTDTNKRKTCLEVANKCAAEEPWFGIEQEYTFLDFD 149

Query:   154 GEGIRAKCSQLPLLRKGPYYCGVGANKVYARDIVEAHYRACLYAGIEISGTNAE------ 207
             G  +    +  P   +GPYYCGVGANKVYARDIV+AHYRACLYAGI++SGTNAE      
Sbjct:   150 GHPLGWPKNGFPG-PQGPYYCGVGANKVYARDIVDAHYRACLYAGIKVSGTNAEVMPAQW 208

Query:   208 ----GPYY-CGVGANKVYARDIVEAHYRACLYAGIEISGTNAEVMPSQWEFQDIAKCQDL 262
                 GP     +G +   AR ++   +R     GI +S  + + MP  W           
Sbjct:   209 EFQVGPCEGISIGDDLWMARFLL---HRISEEFGI-VSTLDPKPMPGDW----------- 253

Query:   263 PIWNYDGSSTYQSE--MREDNGIIEIEKAIDKLSKQHLRHIQAYDPKQGKDNERRLTGKH 320
                N  G+ T  S   MRED GI +IEKA+ KLSK H RHI+AYDPKQG+DN RRLTGKH
Sbjct:   254 ---NGAGAHTNVSTKAMREDGGIRDIEKAVAKLSKCHERHIRAYDPKQGQDNARRLTGKH 310

Query:   321 ETSSIHDFSAGVANRGASIRIPRDCAEQKKGYLEDRR 357
             ETSSI+DFSAGVANRG SIRIPR   +  KGY EDRR
Sbjct:   311 ETSSINDFSAGVANRGCSIRIPRGVNDDGKGYFEDRR 347
GO:0004356 "glutamate-ammonia ligase activity" evidence=ISS;NAS;IDA
GO:0005737 "cytoplasm" evidence=ISS;NAS
GO:0045213 "neurotransmitter receptor metabolic process" evidence=IMP
GO:0006538 "glutamate catabolic process" evidence=IMP
GO:0006542 "glutamine biosynthetic process" evidence=IEA;NAS
GO:0007416 "synapse assembly" evidence=IMP
MGI|MGI:95739 Glul "glutamate-ammonia ligase (glutamine synthetase)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|2710 Glul "glutamate-ammonia ligase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|P16580 GLUL "Glutamine synthetase" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1NQC3 GLUL "Glutamine synthetase" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|P15103 GLUL "Glutamine synthetase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|D0G6X5 GLUL "Glutamine synthetase" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q8HZM5 GLUL "Glutamine synthetase" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|P46410 GLUL "Glutamine synthetase" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-8417 glulb "glutamate-ammonia ligase (glutamine synthase) b" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q43127GLNA2_ARATH6, ., 3, ., 1, ., 20.35830.77770.7325yesN/A
P09606GLNA_RAT4, ., 1, ., 1, ., 1, 50.38420.71850.7801yesN/A
P16580GLNA_CHICK4, ., 1, ., 1, ., 1, 50.4050.79750.8659yesN/A
P15105GLNA_MOUSE4, ., 1, ., 1, ., 1, 50.38650.71850.7801yesN/A
P15104GLNA_HUMAN4, ., 1, ., 1, ., 1, 50.40920.76540.8310yesN/A
P15103GLNA_BOVIN4, ., 1, ., 1, ., 1, 50.39300.72340.7855yesN/A
Q75BT9GLNA_ASHGO6, ., 3, ., 1, ., 20.36650.70370.7723yesN/A
P0CN84GLNA_CRYNJ6, ., 3, ., 1, ., 20.38320.73820.8351yesN/A
Q8HZM5GLNA_CANFA4, ., 1, ., 1, ., 1, 50.41400.76540.8310yesN/A
P46410GLNA_PIG4, ., 1, ., 1, ., 1, 50.39120.71850.7801yesN/A
Q4W8D0GLN13_ORYSJ6, ., 3, ., 1, ., 20.35300.74320.8135yesN/A
Q874T6GLNA_KLULA6, ., 3, ., 1, ., 20.35830.70370.7661yesN/A
P20477GLNA1_DROME6, ., 3, ., 1, ., 20.41950.83450.8471yesN/A
Q6FMT6GLNA_CANGA6, ., 3, ., 1, ., 20.36810.69620.7580yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer6.3.10.921
3rd Layer6.3.1.20.914

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query405
PLN02284354 PLN02284, PLN02284, glutamine synthetase 1e-64
PLN03036432 PLN03036, PLN03036, glutamine synthetase; Provisio 5e-55
pfam00120259 pfam00120, Gln-synt_C, Glutamine synthetase, catal 1e-32
COG0174443 COG0174, GlnA, Glutamine synthetase [Amino acid tr 1e-15
PLN02284354 PLN02284, PLN02284, glutamine synthetase 2e-14
PLN03036432 PLN03036, PLN03036, glutamine synthetase; Provisio 6e-12
PLN02284354 PLN02284, PLN02284, glutamine synthetase 4e-07
pfam0395184 pfam03951, Gln-synt_N, Glutamine synthetase, beta- 1e-06
PLN02284354 PLN02284, PLN02284, glutamine synthetase 0.001
>gnl|CDD|177922 PLN02284, PLN02284, glutamine synthetase Back     alignment and domain information 
 Score =  210 bits (536), Expect = 1e-64
 Identities = 106/270 (39%), Positives = 126/270 (46%), Gaps = 103/270 (38%)

Query: 169 KGPYYCGVGANKVYARDIVEAHYRACLYAGIEISGTNAEGPYYCGVGANKVYARDIVEAH 228
           +GPYYCGVGA+K + RDIV+AHY+AC                                  
Sbjct: 154 QGPYYCGVGADKAFGRDIVDAHYKAC---------------------------------- 179

Query: 229 YRACLYAGIEISGTNAEVMPSQWEFQDIAKCQDL-------------------------- 262
               LYAGI ISG N EVMP QWEFQ +     +                          
Sbjct: 180 ----LYAGINISGINGEVMPGQWEFQ-VGPVVGISAGDQLWVARYILERITEIAGVVVSF 234

Query: 263 ---PI---WNYDGSSTYQS--EMREDNGIIEIEKAIDKLSKQHLRHIQAYDPKQGKDNER 314
              PI   WN  G+ T  S   MRED G   I+KAI+KL  +H  HI AY    G+ NER
Sbjct: 235 DPKPIPGDWNGAGAHTNYSTKSMREDGGYEVIKKAIEKLGLRHKEHIAAY----GEGNER 290

Query: 315 RLTGKHETSSIHDFSAGVANRGASIRIPRDCAEQKKGYLEDRRVANRGASIRIPRDCAEQ 374
           RLTGKHET+ I+ FS GVANRGASIR+ RD   +K+G                       
Sbjct: 291 RLTGKHETADINTFSWGVANRGASIRVGRDT--EKEG----------------------- 325

Query: 375 KKGYLEDRRPSSNCDPYSVTEALIRTCVLN 404
            KGY EDRRP+SN DPY VT  +  T +L 
Sbjct: 326 -KGYFEDRRPASNMDPYVVTSMIAETTILW 354

Length = 354
>gnl|CDD|178603 PLN03036, PLN03036, glutamine synthetase; Provisional Back     alignment and domain information
>gnl|CDD|215731 pfam00120, Gln-synt_C, Glutamine synthetase, catalytic domain Back     alignment and domain information
>gnl|CDD|223252 COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|177922 PLN02284, PLN02284, glutamine synthetase Back     alignment and domain information
>gnl|CDD|178603 PLN03036, PLN03036, glutamine synthetase; Provisional Back     alignment and domain information
>gnl|CDD|177922 PLN02284, PLN02284, glutamine synthetase Back     alignment and domain information
>gnl|CDD|217811 pfam03951, Gln-synt_N, Glutamine synthetase, beta-Grasp domain Back     alignment and domain information
>gnl|CDD|177922 PLN02284, PLN02284, glutamine synthetase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 405
KOG0683|consensus380 100.0
PLN03036432 glutamine synthetase; Provisional 100.0
PLN02284354 glutamine synthetase 100.0
KOG0683|consensus380 100.0
COG0174443 GlnA Glutamine synthetase [Amino acid transport an 100.0
TIGR00653460 GlnA glutamine synthetase, type I. Alternate name: 100.0
TIGR03105435 gln_synth_III glutamine synthetase, type III. This 100.0
PRK09469469 glnA glutamine synthetase; Provisional 100.0
PF00120259 Gln-synt_C: Glutamine synthetase, catalytic domain 99.97
PLN03036432 glutamine synthetase; Provisional 99.94
PLN02284354 glutamine synthetase 99.82
COG0174443 GlnA Glutamine synthetase [Amino acid transport an 99.5
PF0395184 Gln-synt_N: Glutamine synthetase, beta-Grasp domai 98.9
TIGR00653460 GlnA glutamine synthetase, type I. Alternate name: 98.39
PF0395184 Gln-synt_N: Glutamine synthetase, beta-Grasp domai 98.28
TIGR03105435 gln_synth_III glutamine synthetase, type III. This 98.15
PF00120259 Gln-synt_C: Glutamine synthetase, catalytic domain 97.98
PRK09469469 glnA glutamine synthetase; Provisional 97.97
COG3968 724 Uncharacterized protein related to glutamine synth 96.86
>KOG0683|consensus Back     alignment and domain information 
Probab=100.00  E-value=4.7e-86  Score=654.66  Aligned_cols=307  Identities=52%  Similarity=0.827  Sum_probs=295.6

Q ss_pred             ccCCCCcccchhhhhhhcCCCCCCCceEEEEEeeeCCCcccccccccccCcccCCCCCCCcchhhhhcCCccCCChhhhc
Q psy10062         46 LGNSPNAAMNKTVLDKYLALPVPADKIQATYIWIDGTGEGIRAKDRTLTGVVKNVSGRPDQVYYLIMSHGVLGNSPNAAM  125 (405)
Q Consensus        46 ~~~~~~~~~~~~~~~~y~~lP~~~~~~~a~yiwidg~g~~~R~k~rtl~~~~~~~~~~P~w~fd~~~~~~~~GSS~~qa~  125 (405)
                      |..+.++.++++..+.|+.|++..+||||+||||||+||++|||+||+++.++.++++|.||||        ||||+|++
T Consensus         4 l~~~~~~~~~~~~~~~~~~L~~~~~kv~a~YVwidg~ge~~rsk~rt~d~~~~~~~~lp~wnyd--------gsst~QA~   75 (380)
T KOG0683|consen    4 LAQEKRTRLSKTAILEYLYLRAKRKKVQAEYVWIDGTGENLRSKTRTLDAEPSSISELPIWNYD--------GSSTGQAP   75 (380)
T ss_pred             hhcCcccccchhhhhhhccccccCceEEEEEEEecCccccchhhcccccCCccCcccCcccccc--------Cccccccc
Confidence            4457778888999999999999889999999999999999999999999999999999999999        99999999


Q ss_pred             ccccccccccCCCcccccceeEEeeCC--CCCceeeecCC-----CCCCCCCCcchhhhhhhhh--hhhHHHHHHHhhhh
Q psy10062        126 NKTVLDKYLALPVPADKIQATYIWIDG--TGEGIRAKCSQ-----LPLLRKGPYYCGVGANKVY--ARDIVEAHYRACLY  196 (405)
Q Consensus       126 ~~~~SD~~L~~P~~~~~~~~~yi~~dp--~G~~~~v~c~~-----~P~~~qgryyc~~g~~kv~--~rdi~eahyrac~~  196 (405)
                      +. |||++|+ |++        +|+||  .|.+++|+|++     +|.++|.|.-|...+.+..  .++         ||
T Consensus        76 g~-nSd~~l~-Pva--------~~~dPfr~g~Nilv~c~~~~~~~~P~~tn~R~~c~~~~~~~~~~~~~---------PW  136 (380)
T KOG0683|consen   76 GE-NSDVYLR-PVA--------IYPDPFRNGNNILVMCDTYDFDGKPTETNKRVACARIMPKLSTKDTE---------PW  136 (380)
T ss_pred             CC-CCceEEe-ehh--------hcCCcccCCCCEEEEeeccCCCCCcccccchhhHHHHhccccccccC---------Cc
Confidence            99 9999999 999        99999  88999999998     9999999999999999886  788         99


Q ss_pred             cceeee-----------------e-cCCCCCeeeecCcchHHHHHHHHHHHHHHHHcCCeEEEecCCcCCCCcccccc--
Q psy10062        197 AGIEIS-----------------G-TNAEGPYYCGVGANKVYARDIVEAHYRACLYAGIEISGTNAEVMPSQWEFQDI--  256 (405)
Q Consensus       197 ~GIeqE-----------------G-p~~QG~yyc~vG~~~~~gRdI~eahyrace~aGI~isg~~pE~mPGQwE~q~~--  256 (405)
                      ||+|||                 | |+|||+|||+||.+..++|+|+++||++|+++||.++|+|.|+|||||||||+  
T Consensus       137 fg~Eqeyt~l~~~~~~p~gwp~~GFp~Pqgpyyc~VGad~~~~rdiveahy~acLyaGl~i~G~N~EvmPgQwEfqvGp~  216 (380)
T KOG0683|consen  137 FGMEQEYTLLDALDGHPFGWPKGGFPGPQGPYYCGVGADRVFGRDIVEAHYRACLYAGLNISGINVEVMPGQWEFQVGPC  216 (380)
T ss_pred             hhhhHHHhhhccccCCcccCCccCCCCCCCCceeeccccccccchhhhhhHHHHHhhheeeccccccccCceeEEeecch
Confidence            999999                 2 89999999999999999999999999999999999999999999999999999  


Q ss_pred             --cccc-cC-----------------------C---CCCCCcceeeec--CCCCcccHHHHHHHHHHHHHHHHHhhcccC
Q psy10062        257 --AKCQ-DL-----------------------P---IWNYDGSSTYQS--EMREDNGIIEIEKAIDKLSKQHLRHIQAYD  305 (405)
Q Consensus       257 --~~~~-~l-----------------------p---~~nG~G~H~~~S--~~r~~~g~~~i~~ai~~l~~~h~~~i~~y~  305 (405)
                        |.|| ||                       |   +|||+|||+|+|  .||.++|.+.|++||.+|+++|.+||.+||
T Consensus       217 ~GI~~gD~lw~aR~il~rVae~~Gviasf~pKp~~g~WngaG~Htn~ST~~mr~~~g~~~i~~a~~~ls~rh~~hi~~yd  296 (380)
T KOG0683|consen  217 EGISMGDQLWMARYILHRVAEKFGVIASFDPKPILGDWNGAGCHTNFSTKEMREAGGLKIIEEAIPKLSKRHREHIAAYD  296 (380)
T ss_pred             hcccchhhHHHHHHHHHHHHHHhCeeEEecCCCCCCcccCcccccccchhHHHhccCHHHHHHHhhhcchhhhhhhhhcC
Confidence              9999 88                       3   999999999999  799999999999999999999999999999


Q ss_pred             CCCCCCccccccCCCCCCCccccccccCCcccEEEeCCCcchhccchhhhhhhhccCCcccccccccccCCceeEecCCC
Q psy10062        306 PKQGKDNERRLTGKHETSSIHDFSAGVANRGASIRIPRDCAEQKKGYLEDRRVANRGASIRIPRDCAEQKKGYLEDRRPS  385 (405)
Q Consensus       306 p~~~~~n~rRL~g~~et~~~~~fS~g~~nR~asiRIP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~E~Rrp~  385 (405)
                      |+.|++|.|||||.|||+++++|||||+||++|||||+.                          |+..+|||+|||||+
T Consensus       297 p~~G~dN~rrltg~hEt~~i~~Fs~GvAnr~~siri~r~--------------------------va~~~~Gy~edrrP~  350 (380)
T KOG0683|consen  297 PKGGKDNERRLTGRHETGSIDNFSWGVANRNPSIRIPRT--------------------------VAAEGKGYFEDRRPS  350 (380)
T ss_pred             ccCCccchhhhcCCCccccccccccccccCCceeeechh--------------------------hhcccccccccCCCc
Confidence            999999999999999999999999999999999999998                          899999999999999


Q ss_pred             CCCChHHHHHHHHHHhhcCC
Q psy10062        386 SNCDPYSVTEALIRTCVLNE  405 (405)
Q Consensus       386 ~~~nPYlv~~~ll~t~~~~~  405 (405)
                      +|||||+||.+++.|+||++
T Consensus       351 sN~Dpy~Vt~~~~~t~l~~~  370 (380)
T KOG0683|consen  351 SNCDPYAVTLMIIPTTLLEA  370 (380)
T ss_pred             CCCCcceeeHHHhhHHHhcc
Confidence            99999999999999999975

>PLN03036 glutamine synthetase; Provisional Back     alignment and domain information
>PLN02284 glutamine synthetase Back     alignment and domain information
>KOG0683|consensus Back     alignment and domain information
>COG0174 GlnA Glutamine synthetase [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR00653 GlnA glutamine synthetase, type I Back     alignment and domain information
>TIGR03105 gln_synth_III glutamine synthetase, type III Back     alignment and domain information
>PRK09469 glnA glutamine synthetase; Provisional Back     alignment and domain information
>PF00120 Gln-synt_C: Glutamine synthetase, catalytic domain; InterPro: IPR008146 Glutamine synthetase (6 Back     alignment and domain information
>PLN03036 glutamine synthetase; Provisional Back     alignment and domain information
>PLN02284 glutamine synthetase Back     alignment and domain information
>COG0174 GlnA Glutamine synthetase [Amino acid transport and metabolism] Back     alignment and domain information
>PF03951 Gln-synt_N: Glutamine synthetase, beta-Grasp domain; InterPro: IPR008147 Glutamine synthetase (6 Back     alignment and domain information
>TIGR00653 GlnA glutamine synthetase, type I Back     alignment and domain information
>PF03951 Gln-synt_N: Glutamine synthetase, beta-Grasp domain; InterPro: IPR008147 Glutamine synthetase (6 Back     alignment and domain information
>TIGR03105 gln_synth_III glutamine synthetase, type III Back     alignment and domain information
>PF00120 Gln-synt_C: Glutamine synthetase, catalytic domain; InterPro: IPR008146 Glutamine synthetase (6 Back     alignment and domain information
>PRK09469 glnA glutamine synthetase; Provisional Back     alignment and domain information
>COG3968 Uncharacterized protein related to glutamine synthetase [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query405
2uu7_A381 Crystal Structure Of Apo Glutamine Synthetase From 3e-69
2ojw_A384 Crystal Structure Of Human Glutamine Synthetase In 2e-67
3fky_A370 Crystal Structure Of The Glutamine Synthetase Gln1d 1e-44
2d3a_A356 Crystal Structure Of The Maize Glutamine Synthetase 2e-43
>pdb|2UU7|A Chain A, Crystal Structure Of Apo Glutamine Synthetase From Dog ( Canis Familiaris) Length = 381 Back     alignment and structure 
Iteration: 1

 Score =  258 bits (660), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 171/413 (41%), Positives = 216/413 (52%), Gaps = 103/413 (24%)
Query: 46  LGNSPNAAMNKTVLDKYLALPVPADKIQATYIWIDGTGEGIRAKDRTLTGVVKNVSGRPD 105
           +  S ++ +NK +   Y++LP   +K+QA YIWIDGTGEG+R K RTL    K V   P+
Sbjct: 1   MATSASSHLNKGIKQVYMSLPQ-GEKVQAMYIWIDGTGEGLRCKTRTLDSEPKGVEELPE 59
Query: 106 QVY---------------YLI---MSHGVLGNSPNAAMNKTVLDKYLALPVPADKIQATY 147
             +               YL+   M        PN  +   V  KY   P   +      
Sbjct: 60  WNFDGSSTFQSEGSNSDMYLVPAAMFRDPFRKDPNKLVFCEVF-KYNRKPAETN------ 112
Query: 148 IWIDGTGEGIRAKCSQLPLL--RKGPYYCGVGANKVYARDIVEAHYRACLYAGIEISGTN 205
                    +R  C ++  +   + P++   G  + Y     + H       G       
Sbjct: 113 ---------LRHTCKRIMDMVSNQHPWF---GMEQEYTLMGTDGHPFGWPSNGF----PG 156
Query: 206 AEGPYYCGVGANKVYARDIVEAHYRACLYAGIEISGTNAEVMPSQWEFQ-------DIAK 258
            +GPYYCGVGA+K Y RDIVEAHYRACLYAGI+I+GTNAEVMP+QWEFQ       D+  
Sbjct: 157 PQGPYYCGVGADKAYGRDIVEAHYRACLYAGIKIAGTNAEVMPAQWEFQIGPCEGIDMGD 216
Query: 259 ------------CQDL---------PI---WNYDGSSTYQSE--MREDNGIIEIEKAIDK 292
                       C+D          PI   WN  G  T  S   MRE+NG+  IE++I+K
Sbjct: 217 HLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFSTKAMREENGLKYIEESIEK 276
Query: 293 LSKQHLRHIQAYDPKQGKDNERRLTGKHETSSIHDFSAGVANRGASIRIPRDCAEQKKGY 352
           LSK+H  HI+AYDPK G DN RRLTG HETS+I+DFSAGVANRGASIRIPR   ++KKGY
Sbjct: 277 LSKRHQYHIRAYDPKGGLDNARRLTGFHETSNINDFSAGVANRGASIRIPRTVGQEKKGY 336
Query: 353 LEDRRVANRGASIRIPRDCAEQKKGYLEDRRPSSNCDPYSVTEALIRTCVLNE 405
                                      EDRRPS+NCDP+SVTEALIRTC+LNE
Sbjct: 337 --------------------------FEDRRPSANCDPFSVTEALIRTCLLNE 363
>pdb|2OJW|A Chain A, Crystal Structure Of Human Glutamine Synthetase In Complex With Adp And Phosphate Length = 384 Back     alignment and structure
>pdb|3FKY|A Chain A, Crystal Structure Of The Glutamine Synthetase Gln1deltan18 From The Yeast Saccharomyces Cerevisiae Length = 370 Back     alignment and structure
>pdb|2D3A|A Chain A, Crystal Structure Of The Maize Glutamine Synthetase Complexed With Adp And Methionine Sulfoximine Phosphate Length = 356 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query405
2ojw_A384 Glutamine synthetase; amino-acid biosynthesis, lig 1e-72
2ojw_A384 Glutamine synthetase; amino-acid biosynthesis, lig 5e-16
2ojw_A384 Glutamine synthetase; amino-acid biosynthesis, lig 6e-13
2ojw_A384 Glutamine synthetase; amino-acid biosynthesis, lig 1e-09
2d3a_A356 Glutamine synthetase; ligase; HET: P3S ADP; 2.63A 6e-69
2d3a_A356 Glutamine synthetase; ligase; HET: P3S ADP; 2.63A 1e-15
2d3a_A356 Glutamine synthetase; ligase; HET: P3S ADP; 2.63A 4e-05
3fky_A370 Glutamine synthetase; beta-grAsp, catalytic domain 3e-64
3fky_A370 Glutamine synthetase; beta-grAsp, catalytic domain 4e-16
3fky_A370 Glutamine synthetase; beta-grAsp, catalytic domain 3e-10
3fky_A370 Glutamine synthetase; beta-grAsp, catalytic domain 1e-06
>2ojw_A Glutamine synthetase; amino-acid biosynthesis, ligase, structural GENO structural genomics consortium, SGC; HET: ADP; 2.05A {Homo sapiens} PDB: 2qc8_A* 2uu7_A Length = 384 Back     alignment and structure
 Score =  231 bits (590), Expect = 1e-72
 Identities = 124/234 (52%), Positives = 145/234 (61%), Gaps = 59/234 (25%)

Query: 205 NAEGPYYCGVGANKVYARDIVEAHYRACLYAGIEISGTNAEVMPSQWEFQ----DIAKCQ 260
             +GPYYCGVGA++ Y RDIVEAHYRACLYAG++I+GTNAEVMP+QWEFQ    +     
Sbjct: 175 GPQGPYYCGVGADRAYGRDIVEAHYRACLYAGVKIAGTNAEVMPAQWEFQIGPCEGISMG 234

Query: 261 DL------------------------PI---WNYDGSSTYQS--EMREDNGIIEIEKAID 291
           D                         PI   WN  G  T  S   MRE+NG+  IE+AI+
Sbjct: 235 DHLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFSTKAMREENGLKYIEEAIE 294

Query: 292 KLSKQHLRHIQAYDPKQGKDNERRLTGKHETSSIHDFSAGVANRGASIRIPRDCAEQKKG 351
           KLSK+H  HI+AYDPK G DN RRLTG HETS+I+DFSAGVANR A              
Sbjct: 295 KLSKRHQYHIRAYDPKGGLDNARRLTGFHETSNINDFSAGVANRSA-------------- 340

Query: 352 YLEDRRVANRGASIRIPRDCAEQKKGYLEDRRPSSNCDPYSVTEALIRTCVLNE 405
                       SIRIPR   ++KKGY EDRRPS+NCDP+SVTEALIRTC+LNE
Sbjct: 341 ------------SIRIPRTVGQEKKGYFEDRRPSANCDPFSVTEALIRTCLLNE 382
>2ojw_A Glutamine synthetase; amino-acid biosynthesis, ligase, structural GENO structural genomics consortium, SGC; HET: ADP; 2.05A {Homo sapiens} PDB: 2qc8_A* 2uu7_A Length = 384 Back     alignment and structure
>2ojw_A Glutamine synthetase; amino-acid biosynthesis, ligase, structural GENO structural genomics consortium, SGC; HET: ADP; 2.05A {Homo sapiens} PDB: 2qc8_A* 2uu7_A Length = 384 Back     alignment and structure
>2ojw_A Glutamine synthetase; amino-acid biosynthesis, ligase, structural GENO structural genomics consortium, SGC; HET: ADP; 2.05A {Homo sapiens} PDB: 2qc8_A* 2uu7_A Length = 384 Back     alignment and structure
>2d3a_A Glutamine synthetase; ligase; HET: P3S ADP; 2.63A {Zea mays} PDB: 2d3b_A* 2d3c_A* Length = 356 Back     alignment and structure
>2d3a_A Glutamine synthetase; ligase; HET: P3S ADP; 2.63A {Zea mays} PDB: 2d3b_A* 2d3c_A* Length = 356 Back     alignment and structure
>2d3a_A Glutamine synthetase; ligase; HET: P3S ADP; 2.63A {Zea mays} PDB: 2d3b_A* 2d3c_A* Length = 356 Back     alignment and structure
>3fky_A Glutamine synthetase; beta-grAsp, catalytic domain, acetylation, cytoplasm, ligase, UBL conjugation; HET: FLC; 2.95A {Saccharomyces cerevisiae} Length = 370 Back     alignment and structure
>3fky_A Glutamine synthetase; beta-grAsp, catalytic domain, acetylation, cytoplasm, ligase, UBL conjugation; HET: FLC; 2.95A {Saccharomyces cerevisiae} Length = 370 Back     alignment and structure
>3fky_A Glutamine synthetase; beta-grAsp, catalytic domain, acetylation, cytoplasm, ligase, UBL conjugation; HET: FLC; 2.95A {Saccharomyces cerevisiae} Length = 370 Back     alignment and structure
>3fky_A Glutamine synthetase; beta-grAsp, catalytic domain, acetylation, cytoplasm, ligase, UBL conjugation; HET: FLC; 2.95A {Saccharomyces cerevisiae} Length = 370 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query405
3fky_A370 Glutamine synthetase; beta-grAsp, catalytic domain 100.0
2ojw_A384 Glutamine synthetase; amino-acid biosynthesis, lig 100.0
2d3a_A356 Glutamine synthetase; ligase; HET: P3S ADP; 2.63A 100.0
4hpp_A443 Probable glutamine synthetase; glutamine synthase 100.0
3ng0_A473 Glutamine synthetase; GSI, nitrogen metabolism, sy 100.0
4acf_A486 Glutamine synthetase 1; ligase, nucleotide-binding 100.0
1f52_A468 Glutamine synthetase; ADP, MPD, ligase; HET: ADP; 100.0
3qaj_A444 Glutamine synthetase; AMP-PCP, ACP, ligase; HET: G 100.0
2j9i_A421 Glutamate-ammonia ligase domain-containing protein 100.0
3o6x_A 729 Glutamine synthetase; type III, beta barrel,dodeca 99.9
3fky_A370 Glutamine synthetase; beta-grAsp, catalytic domain 99.89
2d3a_A356 Glutamine synthetase; ligase; HET: P3S ADP; 2.63A 99.84
2ojw_A384 Glutamine synthetase; amino-acid biosynthesis, lig 99.83
3ng0_A 473 Glutamine synthetase; GSI, nitrogen metabolism, sy 99.33
1f52_A 468 Glutamine synthetase; ADP, MPD, ligase; HET: ADP; 99.24
4hpp_A443 Probable glutamine synthetase; glutamine synthase 99.22
4acf_A 486 Glutamine synthetase 1; ligase, nucleotide-binding 99.16
2j9i_A421 Glutamate-ammonia ligase domain-containing protein 99.15
3qaj_A444 Glutamine synthetase; AMP-PCP, ACP, ligase; HET: G 99.14
3o6x_A 729 Glutamine synthetase; type III, beta barrel,dodeca 97.37
>3fky_A Glutamine synthetase; beta-grAsp, catalytic domain, acetylation, cytoplasm, ligase, UBL conjugation; HET: FLC; 2.95A {Saccharomyces cerevisiae} Back     alignment and structure
Probab=100.00  E-value=3.2e-64  Score=504.61  Aligned_cols=292  Identities=47%  Similarity=0.754  Sum_probs=239.7

Q ss_pred             cchhhhhhhcCCCCCCCceEEEEEeeeCCCcccccccccccCcccCCCCCCCcchhhhhcCCccCCChhhhccccccccc
Q psy10062         54 MNKTVLDKYLALPVPADKIQATYIWIDGTGEGIRAKDRTLTGVVKNVSGRPDQVYYLIMSHGVLGNSPNAAMNKTVLDKY  133 (405)
Q Consensus        54 ~~~~~~~~y~~lP~~~~~~~a~yiwidg~g~~~R~k~rtl~~~~~~~~~~P~w~fd~~~~~~~~GSS~~qa~~~~~SD~~  133 (405)
                      .+.+++++|+.|++ .++++++|+|+|++| .+|+|++++...++.++++|.|+||        |||+++.... +||++
T Consensus         7 ~~~~~~~~~~~l~~-~~i~~v~~~~~D~~G-~lR~K~~~~~~~~~~~~~~~~~~fD--------Gss~g~~~~~-~sD~~   75 (370)
T 3fky_A            7 EKTQILQKYLELDQ-RGRIIAEYVWIDGTG-NLRSKGRTLKKRITSIDQLPEWNFD--------GSSTNQAPGH-DSDIY   75 (370)
T ss_dssp             ---------------CCCEEEEEEEECSSS-CEEEEEEEESSCCCSGGGSCCEEEC--------GGGTTSSCCC-C--EE
T ss_pred             ccHHHHHHHhCccc-CCeEEEEEEEEcCCC-CeEEEEEECccccchHHhCCccccC--------CcccccccCC-CCCee
Confidence            34578899999998 889999999999999 8999999999999999999999999        9999877666 99999


Q ss_pred             ccCCCcccccceeEEeeCC--CCCceeeecCC-----CCCCCCCCcchhhhhhhhhhhhHHHHHHHhhhhcceeee----
Q psy10062        134 LALPVPADKIQATYIWIDG--TGEGIRAKCSQ-----LPLLRKGPYYCGVGANKVYARDIVEAHYRACLYAGIEIS----  202 (405)
Q Consensus       134 L~~P~~~~~~~~~yi~~dp--~G~~~~v~c~~-----~P~~~qgryyc~~g~~kv~~rdi~eahyrac~~~GIeqE----  202 (405)
                      |+ |+.        ++++|  .++..+|+|+.     +|.+.+.|+.|+..++++.|..         +++|+|+|    
T Consensus        76 l~-Pdt--------~~~~Pw~~~~~a~vlcd~~~~dG~P~~~~pR~iLkr~~~~~~g~~---------~~~G~E~EF~Lf  137 (370)
T 3fky_A           76 LK-PVA--------YYPDPFRRGDNIVVLAACYNNDGTPNKFNHRHEAAKLFAAHKDEE---------IWFGLEQEYTLF  137 (370)
T ss_dssp             EE-EEE--------EEECTTTCTTCEEEEEEEECTTSSBCTTCCHHHHHHHHHHTGGGC---------CEEEEEEEEEEE
T ss_pred             Ee-eeE--------EEEcCCCCCCeEEEEEEEEcCCCCCCCCCHHHHHHHHHHHhcCCC---------ceEEeeeEEEEE
Confidence            99 964        55444  66789999986     8999999999999998877555         99999999    


Q ss_pred             ---e----------cCCCCCeeeecCcchHHHHHHHHHHHHHHHHcCCeEEEecCCcCCCCcccccc----cccc-cC--
Q psy10062        203 ---G----------TNAEGPYYCGVGANKVYARDIVEAHYRACLYAGIEISGTNAEVMPSQWEFQDI----AKCQ-DL--  262 (405)
Q Consensus       203 ---G----------p~~QG~yyc~vG~~~~~gRdI~eahyrace~aGI~isg~~pE~mPGQwE~q~~----~~~~-~l--  262 (405)
                         +          |.+||+|||.++....++++|+++++++|+++||+++++|+|++||||||++.    +++| ++  
T Consensus       138 ~~~~~~~~~p~~~~p~~~g~yy~~~~~~~~~~~~i~~~i~~~l~~~Gi~ve~~h~E~~pGQ~Ei~~~~~~~l~aAD~~~~  217 (370)
T 3fky_A          138 DMYDDVYGWPKGGYPAPQGPYYCGVGAGKVYARDMIEAHYRACLYAGLEISGINAEVMPSQWEFQVGPCTGIDMGDQLWM  217 (370)
T ss_dssp             CTTSSBTTCCTTSBCSCSSSCTTCCSTTTCSCHHHHHHHHHHHHHHTCCEEEEEECSSTTEEEEEEEEEETHHHHHHHHH
T ss_pred             ccCCCcccCCCCCccCCCCccccccchhhHHHHHHHHHHHHHHHHcCCCeeeeecCcCCCceEEecCCCCHHHHHHHHHH
Confidence               1          35689999999887778999999999999999999999999999999999999    7777 55  


Q ss_pred             ---------------------C---CCCCCcceeeecCC--CCcccHHHHHHHHHHHHHHHHHhhcccCCCCCCCccccc
Q psy10062        263 ---------------------P---IWNYDGSSTYQSEM--REDNGIIEIEKAIDKLSKQHLRHIQAYDPKQGKDNERRL  316 (405)
Q Consensus       263 ---------------------p---~~nG~G~H~~~S~~--r~~~g~~~i~~ai~~l~~~h~~~i~~y~p~~~~~n~rRL  316 (405)
                                           |   +|||||||+|+|+.  ++++|+..++++|++|+++|+++|.+|    +.||||||
T Consensus       218 ~K~~vk~vA~~~G~~ATFmpKP~~gd~~GSG~H~H~Sl~~~~~~~g~~~~~~~i~gl~~~h~~~i~a~----~~nSYkRL  293 (370)
T 3fky_A          218 ARYFLHRVAEEFGIKISFHPKPLKGDWNGAGCHANVSTKEMRQPGGTKYIEQAIEKLSKRHAEHIKLY----GSDNDMRL  293 (370)
T ss_dssp             HHHHHHHHHHTTTCEEECCSCSSSSSSCCCBEEEEEECHHHHSSSTHHHHHHHHHHHHHTHHHHHHSS----CTTGGGC-
T ss_pred             HHHHHHHHHHHhCcEEEEcccccCCCCCcccceeeeccccccCCCCHHHHHHHHHHHHHHhHHHHHHH----ccchhhhc
Confidence                                 4   59999999999975  556788889999999999999999999    46999999


Q ss_pred             cCCCCCCCccccccccCCcccEEEeCCCcchhccchhhhhhhhccCCcccccccccccCCceeEecCCCCCCChHHHHHH
Q psy10062        317 TGKHETSSIHDFSAGVANRGASIRIPRDCAEQKKGYLEDRRVANRGASIRIPRDCAEQKKGYLEDRRPSSNCDPYSVTEA  396 (405)
Q Consensus       317 ~g~~et~~~~~fS~g~~nR~asiRIP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~E~Rrp~~~~nPYlv~~~  396 (405)
                      ++.|||+++..+|||++||+|+||||..                          +...+++|||+|+|+++||||||++|
T Consensus       294 ~~~~eap~~~~~sWG~~NRsa~iRIp~~--------------------------~~~~~~~riE~R~pda~aNPYLa~Aa  347 (370)
T 3fky_A          294 TGRHETASMTAFSSGVANRGSSIRIPRS--------------------------VAKEGYGYFEDRRPASNIDPYLVTGI  347 (370)
T ss_dssp             -------CCSCCCEEESCTTSSEEECHH--------------------------HHHHTCCCEEECCCBTTCCHHHHHHH
T ss_pred             CCCccCCCcccceEecCCCceeEEecCC--------------------------CCCCCCCEEEECCCCCCCCHHHHHHH
Confidence            9999999999999999999999999987                          34445789999999999999999999


Q ss_pred             HHHHhhcC
Q psy10062        397 LIRTCVLN  404 (405)
Q Consensus       397 ll~t~~~~  404 (405)
                      ||+++++.
T Consensus       348 ilaagl~G  355 (370)
T 3fky_A          348 MCETVCGA  355 (370)
T ss_dssp             HHHHHHCC
T ss_pred             HHHHHhcC
Confidence            99999864
>2ojw_A Glutamine synthetase; amino-acid biosynthesis, ligase, structural GENO structural genomics consortium, SGC; HET: ADP; 2.05A {Homo sapiens} PDB: 2qc8_A* 2uu7_A Back     alignment and structure
>2d3a_A Glutamine synthetase; ligase; HET: P3S ADP; 2.63A {Zea mays} PDB: 2d3b_A* 2d3c_A* Back     alignment and structure
>4hpp_A Probable glutamine synthetase; glutamine synthase homolog, glutamate, polyamine, ligase; HET: GLU; 2.50A {Pseudomonas aeruginosa} Back     alignment and structure
>3ng0_A Glutamine synthetase; GSI, nitrogen metabolism, synec ligase; HET: ANP; 2.80A {Synechocystis SP} Back     alignment and structure
>4acf_A Glutamine synthetase 1; ligase, nucleotide-binding, TRI-substituted IMID TAUT state, RV2220, GLNA1; HET: 46B P3S; 2.00A {Mycobacterium tuberculosis} PDB: 2wgs_A* 2whi_A* 3zxr_A* 3zxv_A* 2bvc_A* 1hto_A* 1htq_A* Back     alignment and structure
>1f52_A Glutamine synthetase; ADP, MPD, ligase; HET: ADP; 2.49A {Salmonella typhimurium} SCOP: d.15.9.1 d.128.1.1 PDB: 1f1h_A* 1fpy_A* 1lgr_A* 2lgs_A* 2gls_A Back     alignment and structure
>2j9i_A Glutamate-ammonia ligase domain-containing protein 1; 17.00A {Mus musculus} Back     alignment and structure
>3o6x_A Glutamine synthetase; type III, beta barrel,dodecamer, ligas; HET: P3S ADP; 3.50A {Bacteroides fragilis} Back     alignment and structure
>3fky_A Glutamine synthetase; beta-grAsp, catalytic domain, acetylation, cytoplasm, ligase, UBL conjugation; HET: FLC; 2.95A {Saccharomyces cerevisiae} Back     alignment and structure
>2d3a_A Glutamine synthetase; ligase; HET: P3S ADP; 2.63A {Zea mays} PDB: 2d3b_A* 2d3c_A* Back     alignment and structure
>2ojw_A Glutamine synthetase; amino-acid biosynthesis, ligase, structural GENO structural genomics consortium, SGC; HET: ADP; 2.05A {Homo sapiens} PDB: 2qc8_A* 2uu7_A Back     alignment and structure
>3ng0_A Glutamine synthetase; GSI, nitrogen metabolism, synec ligase; HET: ANP; 2.80A {Synechocystis SP} Back     alignment and structure
>1f52_A Glutamine synthetase; ADP, MPD, ligase; HET: ADP; 2.49A {Salmonella typhimurium} SCOP: d.15.9.1 d.128.1.1 PDB: 1f1h_A* 1fpy_A* 1lgr_A* 2lgs_A* 2gls_A Back     alignment and structure
>4hpp_A Probable glutamine synthetase; glutamine synthase homolog, glutamate, polyamine, ligase; HET: GLU; 2.50A {Pseudomonas aeruginosa} Back     alignment and structure
>4acf_A Glutamine synthetase 1; ligase, nucleotide-binding, TRI-substituted IMID TAUT state, RV2220, GLNA1; HET: 46B P3S; 2.00A {Mycobacterium tuberculosis} PDB: 2wgs_A* 2whi_A* 3zxr_A* 3zxv_A* 2bvc_A* 1hto_A* 1htq_A* Back     alignment and structure
>2j9i_A Glutamate-ammonia ligase domain-containing protein 1; 17.00A {Mus musculus} Back     alignment and structure
>3o6x_A Glutamine synthetase; type III, beta barrel,dodecamer, ligas; HET: P3S ADP; 3.50A {Bacteroides fragilis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query405
d2bvca2374 Glutamine synthetase, C-terminal domain {Mycobacte 99.95
d1f52a2368 Glutamine synthetase, C-terminal domain {Salmonell 99.94
d2bvca1100 Glutamine synthetase, N-terminal domain {Mycobacte 96.83
d1f52a1100 Glutamine synthetase, N-terminal domain {Salmonell 96.77
d2bvca2 374 Glutamine synthetase, C-terminal domain {Mycobacte 95.58
d1f52a2 368 Glutamine synthetase, C-terminal domain {Salmonell 95.58
d1f52a1100 Glutamine synthetase, N-terminal domain {Salmonell 91.51
d2bvca1100 Glutamine synthetase, N-terminal domain {Mycobacte 89.86
>d2bvca2 d.128.1.1 (A:105-478) Glutamine synthetase, C-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Glutamine synthetase/guanido kinase
superfamily: Glutamine synthetase/guanido kinase
family: Glutamine synthetase catalytic domain
domain: Glutamine synthetase, C-terminal domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.95  E-value=1.1e-27  Score=238.00  Aligned_cols=174  Identities=20%  Similarity=0.226  Sum_probs=143.1

Q ss_pred             hhhHHHHHHHhhhhcceeeee----cCCCCCeeeecC--cchHHHHHHHHHHH---HHHHHcCCeEEEecCCcCCCCccc
Q psy10062        183 ARDIVEAHYRACLYAGIEISG----TNAEGPYYCGVG--ANKVYARDIVEAHY---RACLYAGIEISGTNAEVMPSQWEF  253 (405)
Q Consensus       183 ~rdi~eahyrac~~~GIeqEG----p~~QG~yyc~vG--~~~~~gRdI~eahy---race~aGI~isg~~pE~mPGQwE~  253 (405)
                      .+++++.-.++|..+||.++.    .++-|++++.+.  +...++|+++..++   ++|.++|+.+++ ||||.+++   
T Consensus        91 ~~~~~~~i~~~l~~~Gi~~~~~~~E~~~~gQ~Ei~~~~~~~l~aAD~~~~~k~~ik~vA~~~G~~atF-mpKP~~~~---  166 (374)
T d2bvca2          91 YVDLRDKMLTNLINSGFILEKGHHEVGSGGQAEINYQFNSLLHAADDMQLYKYIIKNTAWQNGKTVTF-MPKPLFGD---  166 (374)
T ss_dssp             CHHHHHHHHHHHHHTTCCEEEEEECSSTTTEEEEEECCEEHHHHHHHHHHHHHHHHHHHHHTTCEEEC-CSCSSTTS---
T ss_pred             hHHHHHHHHHHHHhcCCceEeeecccccCceEEEecCcchhhHHHHHHHHHHHHHHHHHHhcCCeEEE-eeeeccCC---
Confidence            368889999999999999994    123456666554  47899999999998   999999999998 99999999   


Q ss_pred             ccccccccCCCCCCCcceeeecCCCCc----------ccH-HHHHHHHHHHHHHHHHhhccc-CCCCCCCccccccCCCC
Q psy10062        254 QDIAKCQDLPIWNYDGSSTYQSEMRED----------NGI-IEIEKAIDKLSKQHLRHIQAY-DPKQGKDNERRLTGKHE  321 (405)
Q Consensus       254 q~~~~~~~lp~~nG~G~H~~~S~~r~~----------~g~-~~i~~ai~~l~~~h~~~i~~y-~p~~~~~n~rRL~g~~e  321 (405)
                                  +|||||+|+|+.+++          +|+ +...++|+||+ +|...+.++ +|+.  ||||||++.++
T Consensus       167 ------------~Gsg~H~h~Sl~~~~~n~~~~~~~~~~lS~~~~~~iaGlL-~h~~~l~al~~P~v--NSY~Rl~~~~~  231 (374)
T d2bvca2         167 ------------NGSGMHCHQSLWKDGAPLMYDETGYAGLSDTARHYIGGLL-HHAPSLLAFTNPTV--NSYKRLVPGYE  231 (374)
T ss_dssp             ------------CCCCEEEEEEEEETTEECSBCTTSGGGBCHHHHHHHHHHH-HHHHHHHHHHSCST--THHHHSSTTSS
T ss_pred             ------------CCcceeEEEEeccCCCCcccccccccccCHHHHHHHHHHH-hhhHHHHHHHcCCC--chhhhcCCCCc
Confidence                        999999999964321          333 34488999997 677777666 9966  99999997777


Q ss_pred             CCCccccccccCCcccEEEeCCCcchhccchhhhhhhhccCCcccccccccccCCceeEecCCCCCCChHHHHHHHHHHh
Q psy10062        322 TSSIHDFSAGVANRGASIRIPRDCAEQKKGYLEDRRVANRGASIRIPRDCAEQKKGYLEDRRPSSNCDPYSVTEALIRTC  401 (405)
Q Consensus       322 t~~~~~fS~g~~nR~asiRIP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~E~Rrp~~~~nPYlv~~~ll~t~  401 (405)
                      ++..  .+||..||+++||||..                          ...+++.|||+|.|+++||||||+||||+++
T Consensus       232 ap~~--~~Wg~~nR~~~iRi~~~--------------------------~~~~~~~riE~R~~da~aNPYL~lAailaag  283 (374)
T d2bvca2         232 APIN--LVYSQRNRSACVRIPIT--------------------------GSNPKAKRLEFRSPDSSGNPYLAFSAMLMAG  283 (374)
T ss_dssp             SCSB--CCEEETCTTSSEEECCC--------------------------CSCTTSCCEEECSCCSSSCHHHHHHHHHHHH
T ss_pred             cceE--EeeccCccccceeeccc--------------------------cCCCccceEEecCCCccccHHHHHHHHHHHh
Confidence            7665  47889999999999976                          3345677999999999999999999999987


Q ss_pred             hc
Q psy10062        402 VL  403 (405)
Q Consensus       402 ~~  403 (405)
                      +.
T Consensus       284 l~  285 (374)
T d2bvca2         284 LD  285 (374)
T ss_dssp             HH
T ss_pred             hh
Confidence            63
>d1f52a2 d.128.1.1 (A:101-468) Glutamine synthetase, C-terminal domain {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d2bvca1 d.15.9.1 (A:5-104) Glutamine synthetase, N-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1f52a1 d.15.9.1 (A:1-100) Glutamine synthetase, N-terminal domain {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d2bvca2 d.128.1.1 (A:105-478) Glutamine synthetase, C-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1f52a2 d.128.1.1 (A:101-468) Glutamine synthetase, C-terminal domain {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1f52a1 d.15.9.1 (A:1-100) Glutamine synthetase, N-terminal domain {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d2bvca1 d.15.9.1 (A:5-104) Glutamine synthetase, N-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure