Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
ID Alignment Graph Length
Definition
E-value
Query 124
pfam00201 500
pfam00201, UDPGT, UDP-glucoronosyl and UDP-glucosy
1e-30
PHA03392 507
PHA03392, egt, ecdysteroid UDP-glucosyltransferase
1e-29
TIGR01426 392
TIGR01426, MGT, glycosyltransferase, MGT family
2e-20
cd03784 401
cd03784, GT1_Gtf_like, This family includes the Gt
1e-18
COG1819 406
COG1819, COG1819, Glycosyl transferases, related t
3e-18
PLN02555 480
PLN02555, PLN02555, limonoid glucosyltransferase
4e-13
PLN02410 451
PLN02410, PLN02410, UDP-glucoronosyl/UDP-glucosyl
5e-13
PLN02554 481
PLN02554, PLN02554, UDP-glycosyltransferase family
4e-10
PLN00164 480
PLN00164, PLN00164, glucosyltransferase; Provision
6e-10
PLN02167 475
PLN02167, PLN02167, UDP-glycosyltransferase family
1e-09
PLN02210 456
PLN02210, PLN02210, UDP-glucosyl transferase
8e-09
PLN02448 459
PLN02448, PLN02448, UDP-glycosyltransferase family
2e-08
PLN02173 449
PLN02173, PLN02173, UDP-glucosyl transferase famil
4e-08
PLN02207 468
PLN02207, PLN02207, UDP-glycosyltransferase
4e-08
PLN02534 491
PLN02534, PLN02534, UDP-glycosyltransferase
6e-08
PLN02863 477
PLN02863, PLN02863, UDP-glucoronosyl/UDP-glucosyl
8e-08
PLN03015 470
PLN03015, PLN03015, UDP-glucosyl transferase
2e-07
pfam13528 317
pfam13528, Glyco_trans_1_3, Glycosyl transferase f
2e-07
PLN03004 451
PLN03004, PLN03004, UDP-glycosyltransferase
3e-07
PLN02562 448
PLN02562, PLN02562, UDP-glycosyltransferase
6e-07
pfam04101 167
pfam04101, Glyco_tran_28_C, Glycosyltransferase fa
1e-06
PLN02992 481
PLN02992, PLN02992, coniferyl-alcohol glucosyltran
2e-06
PLN02152 455
PLN02152, PLN02152, indole-3-acetate beta-glucosyl
4e-06
PLN03007 482
PLN03007, PLN03007, UDP-glucosyltransferase family
2e-05
PLN02670 472
PLN02670, PLN02670, transferase, transferring glyc
6e-05
PLN02764 453
PLN02764, PLN02764, glycosyltransferase family pro
1e-04
TIGR00661 321
TIGR00661, MJ1255, conserved hypothetical protein
1e-04
PLN02208 442
PLN02208, PLN02208, glycosyltransferase family pro
0.003
>gnl|CDD|201077 pfam00201, UDPGT, UDP-glucoronosyl and UDP-glucosyl transferase
Back Hide alignment and domain information
Score = 113 bits (285), Expect = 1e-30
Identities = 42/113 (37%), Positives = 68/113 (60%)
Query: 9 LVTAFSRTGLTVLWRYEGDSIENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEA 68
+ +A ++ VLWR++G L N + KW+PQ D+L HP R F++H G N EA
Sbjct: 298 IASALAQIPQKVLWRFDGTKPSTLGRNTRLVKWLPQNDLLGHPKTRAFVTHAGSNGVYEA 357
Query: 69 IHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNP 121
I +G+P++G+P +GDQ+ + +H+ GA V L+ +T E + A V+N+P
Sbjct: 358 ICHGVPMVGMPLFGDQMDNAKHMEAKGAAVTLNVLTMTSEDLLNALKTVINDP 410
>gnl|CDD|223071 PHA03392, egt, ecdysteroid UDP-glucosyltransferase; Provisional
Back Show alignment and domain information
Score = 110 bits (278), Expect = 1e-29
Identities = 44/123 (35%), Positives = 67/123 (54%), Gaps = 1/123 (0%)
Query: 1 MSDGMRTLLVTAFSRTGLTVLWRYEGD-SIENLPGNVHIRKWIPQQDVLAHPNCRLFISH 59
M + +L+ F + VLW+Y+G+ NLP NV +KW PQ+ VL H N + F++
Sbjct: 312 MDNEFLQMLLRTFKKLPYNVLWKYDGEVEAINLPANVLTQKWFPQRAVLKHKNVKAFVTQ 371
Query: 60 GGVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLN 119
GGV S EAI +P++G+P GDQ + V+LG G L ++ + A V+
Sbjct: 372 GGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALDTVTVSAAQLVLAIVDVIE 431
Query: 120 NPR 122
NP+
Sbjct: 432 NPK 434
>gnl|CDD|233407 TIGR01426, MGT, glycosyltransferase, MGT family
Back Show alignment and domain information
Score = 84.3 bits (209), Expect = 2e-20
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 2/96 (2%)
Query: 27 DSIENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQLS 86
+ LP NV +R+W+PQ ++L + FI+HGG+NS +EA+ G+P++ VP DQ
Sbjct: 268 ADLGELPPNVEVRQWVPQLEILKKAD--AFITHGGMNSTMEALFNGVPMVAVPQGADQPM 325
Query: 87 HVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPR 122
R I +LG G L +T E + A VL++PR
Sbjct: 326 TARRIAELGLGRHLPPEEVTAEKLREAVLAVLSDPR 361
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production [Cellular processes, Toxin production and resistance]. Length = 392
>gnl|CDD|99960 cd03784, GT1_Gtf_like, This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin
Back Show alignment and domain information
Score = 79.7 bits (197), Expect = 1e-18
Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 26 GDSIENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQL 85
G E+LP NV + ++P +L P C + HGG + A+ G+P + VPF+GDQ
Sbjct: 280 GLGAEDLPDNVRVVDFVPHDWLL--PRCAAVVHHGGAGTTAAALRAGVPQLVVPFFGDQP 337
Query: 86 SHVRHIVDLGAGVELSYFNITLESIAWA 113
+ +LGAG L +T E +A A
Sbjct: 338 FWAARVAELGAGPALDPRELTAERLAAA 365
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. Length = 401
>gnl|CDD|224732 COG1819, COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Back Show alignment and domain information
Score = 78.6 bits (194), Expect = 3e-18
Identities = 29/95 (30%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 27 DSIENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQLS 86
D++ N+P NV + ++PQ ++L I HGG + EA++ G+P++ +P DQ
Sbjct: 277 DTLVNVPDNVIVADYVPQLELLPR--ADAVIHHGGAGTTSEALYAGVPLVVIPDGADQPL 334
Query: 87 HVRHIVDLGAGVELSYFNITLESIAWATSIVLNNP 121
+ + +LGAG+ L + +T E + A + VL +
Sbjct: 335 NAERVEELGAGIALPFEELTEERLRAAVNEVLADD 369
>gnl|CDD|178170 PLN02555, PLN02555, limonoid glucosyltransferase
Back Show alignment and domain information
Score = 64.0 bits (156), Expect = 4e-13
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 30 ENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQLSHVR 89
E I +W PQ+ VLAHP+ F++H G NS +EA+ G+P++ P +GDQ++
Sbjct: 333 EKAGDKGKIVQWCPQEKVLAHPSVACFVTHCGWNSTMEALSSGVPVVCFPQWGDQVTDAV 392
Query: 90 HIVD-LGAGVELS 101
++VD GV L
Sbjct: 393 YLVDVFKTGVRLC 405
>gnl|CDD|178032 PLN02410, PLN02410, UDP-glucoronosyl/UDP-glucosyl transferase family protein
Back Show alignment and domain information
Score = 63.9 bits (155), Expect = 5e-13
Identities = 31/71 (43%), Positives = 42/71 (59%), Gaps = 8/71 (11%)
Query: 29 IENLP--------GNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPF 80
IE+LP G +I KW PQ++VL+HP F SH G NS LE+I G+P+I PF
Sbjct: 311 IESLPKEFSKIISGRGYIVKWAPQKEVLSHPAVGGFWSHCGWNSTLESIGEGVPMICKPF 370
Query: 81 YGDQLSHVRHI 91
DQ + R++
Sbjct: 371 SSDQKVNARYL 381
>gnl|CDD|215304 PLN02554, PLN02554, UDP-glycosyltransferase family protein
Back Show alignment and domain information
Score = 55.2 bits (133), Expect = 4e-10
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 41 WIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVD-LGAGVE 99
W PQ VLA P F++H G NS LE++ +G+P+ P Y +Q + +V+ LG VE
Sbjct: 349 WAPQVAVLAKPAIGGFVTHCGWNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVE 408
Query: 100 L 100
+
Sbjct: 409 I 409
>gnl|CDD|215084 PLN00164, PLN00164, glucosyltransferase; Provisional
Back Show alignment and domain information
Score = 54.7 bits (132), Expect = 6e-10
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 39 RKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQ-LSHVRHIVDLGAG 97
W PQ+++LAH F++H G NS LE++ +G+P+ P Y +Q L+ + D+G
Sbjct: 344 PTWAPQKEILAHAAVGGFVTHCGWNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVA 403
Query: 98 VEL 100
V +
Sbjct: 404 VAM 406
>gnl|CDD|215112 PLN02167, PLN02167, UDP-glycosyltransferase family protein
Back Show alignment and domain information
Score = 54.0 bits (130), Expect = 1e-09
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 41 WIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYGD-QLSHVRHIVDLGAGVE 99
W PQ ++LAH F+SH G NS LE++ +G+PI P Y + QL+ + +LG VE
Sbjct: 347 WAPQVEILAHKAIGGFVSHCGWNSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVE 406
Query: 100 L 100
L
Sbjct: 407 L 407
>gnl|CDD|215127 PLN02210, PLN02210, UDP-glucosyl transferase
Back Show alignment and domain information
Score = 52.0 bits (124), Expect = 8e-09
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 10/102 (9%)
Query: 9 LVTAFSRTGLTVLW----RYEGDSIENL-----PGNVHIRKWIPQQDVLAHPNCRLFISH 59
+ A G+ LW + + +++ L G + +W PQ+ +L+H F++H
Sbjct: 290 IAKALKNRGVPFLWVIRPKEKAQNVQVLQEMVKEGQGVVLEWSPQEKILSHMAISCFVTH 349
Query: 60 GGVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDL-GAGVEL 100
G NS +E + G+P++ P + DQ R +VD+ G GV +
Sbjct: 350 CGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRM 391
>gnl|CDD|215247 PLN02448, PLN02448, UDP-glycosyltransferase family protein
Back Show alignment and domain information
Score = 50.8 bits (122), Expect = 2e-08
Identities = 20/53 (37%), Positives = 30/53 (56%)
Query: 41 WIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVD 93
W Q VL H + F +H G NS LEA+ G+P++ P + DQ + + IV+
Sbjct: 330 WCDQLKVLCHSSVGGFWTHCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVE 382
>gnl|CDD|177830 PLN02173, PLN02173, UDP-glucosyl transferase family protein
Back Show alignment and domain information
Score = 49.6 bits (118), Expect = 4e-08
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 38 IRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDL-GA 96
+ KW PQ VL++ F++H G NS +E + G+P++ +P + DQ + ++I D+
Sbjct: 321 VLKWSPQLQVLSNKAIGCFMTHCGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKV 380
Query: 97 GVEL 100
GV +
Sbjct: 381 GVRV 384
>gnl|CDD|177857 PLN02207, PLN02207, UDP-glycosyltransferase
Back Show alignment and domain information
Score = 49.7 bits (118), Expect = 4e-08
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 29 IENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYGD-QLSH 87
++ + G I W PQ ++LAH F+SH G NS +E++ +G+PI+ P Y + QL+
Sbjct: 327 LDRVSGRGMICGWSPQVEILAHKAVGGFVSHCGWNSIVESLWFGVPIVTWPMYAEQQLNA 386
Query: 88 VRHIVDLGAGVEL 100
+ +L VEL
Sbjct: 387 FLMVKELKLAVEL 399
>gnl|CDD|215293 PLN02534, PLN02534, UDP-glycosyltransferase
Back Show alignment and domain information
Score = 49.5 bits (118), Expect = 6e-08
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 38 IRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVD-LGA 96
I+ W PQ +L+HP F++H G NS +E I G+P+I P + +Q + + IV+ L
Sbjct: 348 IKGWAPQVLILSHPAIGGFLTHCGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRI 407
Query: 97 GVEL 100
GV +
Sbjct: 408 GVRV 411
>gnl|CDD|215465 PLN02863, PLN02863, UDP-glucoronosyl/UDP-glucosyl transferase family protein
Back Show alignment and domain information
Score = 48.7 bits (116), Expect = 8e-08
Identities = 21/56 (37%), Positives = 31/56 (55%)
Query: 38 IRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVD 93
IR W PQ +L+H F++H G NS LE + G+P++ P DQ + +VD
Sbjct: 347 IRGWAPQVAILSHRAVGAFLTHCGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVD 402
>gnl|CDD|178589 PLN03015, PLN03015, UDP-glucosyl transferase
Back Show alignment and domain information
Score = 48.2 bits (114), Expect = 2e-07
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 38 IRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQ 84
+ +W PQ ++L+H + F+SH G +S LE++ G+PI+ P Y +Q
Sbjct: 339 VTQWAPQVEILSHRSIGGFLSHCGWSSVLESLTKGVPIVAWPLYAEQ 385
>gnl|CDD|222200 pfam13528, Glyco_trans_1_3, Glycosyl transferase family 1
Back Show alignment and domain information
Score = 47.3 bits (113), Expect = 2e-07
Identities = 21/91 (23%), Positives = 39/91 (42%), Gaps = 4/91 (4%)
Query: 24 YEGDSIENLPGNVHIRKWIPQQDVLAH-PNCRLFISHGGVNSALEAIHYGIPIIGVPFYG 82
Y + E GN+ R ++ L C I + G EA++ G P++ VP G
Sbjct: 221 YGPNKEEGREGNLTFRP-FSEEGFLRDLAECSAVICNAGFELLSEALYLGKPLLLVPLDG 279
Query: 83 --DQLSHVRHIVDLGAGVELSYFNITLESIA 111
+Q S+ ++ LG G+ + ++ +
Sbjct: 280 QFEQTSNALYLERLGYGIVMDMEDLDPAVLR 310
>gnl|CDD|178581 PLN03004, PLN03004, UDP-glycosyltransferase
Back Show alignment and domain information
Score = 47.0 bits (111), Expect = 3e-07
Identities = 22/56 (39%), Positives = 32/56 (57%)
Query: 38 IRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVD 93
++ W PQ VL H F++H G NS LEA+ G+P++ P Y +Q + IVD
Sbjct: 338 VKSWAPQVPVLNHKAVGGFVTHCGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVD 393
>gnl|CDD|215305 PLN02562, PLN02562, UDP-glycosyltransferase
Back Show alignment and domain information
Score = 46.4 bits (110), Expect = 6e-07
Identities = 33/104 (31%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Query: 9 LVTAFSRTGLTVLWRYEGDSIENLP-GNVH-------IRKWIPQQDVLAHPNCRLFISHG 60
L A +G +W E LP G V + W PQ +VL H +++H
Sbjct: 295 LALALEASGRPFIWVLNPVWREGLPPGYVERVSKQGKVVSWAPQLEVLKHQAVGCYLTHC 354
Query: 61 GVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDL-GAGVELSYF 103
G NS +EAI ++ P GDQ + +IVD+ GV +S F
Sbjct: 355 GWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRISGF 398
>gnl|CDD|217893 pfam04101, Glyco_tran_28_C, Glycosyltransferase family 28 C-terminal domain
Back Show alignment and domain information
Score = 44.6 bits (106), Expect = 1e-06
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 5/75 (6%)
Query: 55 LFISHGGVNSALEAIHYGIPIIGVP----FYGDQLSHVRHIVDLGAGVELSYFNITLESI 110
L IS G + E + G P I VP Q ++ +V GA + L +T E +
Sbjct: 75 LVISRAGAGTIAELLALGKPAILVPRPKAAGEHQDNNALELVKAGAALVLLQKELTPEKL 134
Query: 111 AWA-TSIVLNNPRRY 124
A ++L R Y
Sbjct: 135 VEALLKLLLKPLRLY 149
The glycosyltransferase family 28 includes monogalactosyldiacylglycerol synthase (EC 2.4.1.46) and UDP-N-acetylglucosamine transferase (EC 2.4.1.-). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site. Length = 167
>gnl|CDD|178572 PLN02992, PLN02992, coniferyl-alcohol glucosyltransferase
Back Show alignment and domain information
Score = 45.0 bits (106), Expect = 2e-06
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 38 IRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVD-LGA 96
+ W PQ ++LAH F++H G +S LE++ G+P+I P + +Q + + D LG
Sbjct: 342 VPSWAPQAEILAHQAVGGFLTHCGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGI 401
Query: 97 GVEL 100
V
Sbjct: 402 AVRS 405
>gnl|CDD|177813 PLN02152, PLN02152, indole-3-acetate beta-glucosyltransferase
Back Show alignment and domain information
Score = 43.9 bits (103), Expect = 4e-06
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 7/72 (9%)
Query: 25 EGDSIENLPGNVH-------IRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIG 77
E IE + G H I W Q +VL H F++H G +S+LE++ G+P++
Sbjct: 311 EETEIEKIAGFRHELEEVGMIVSWCSQIEVLRHRAVGCFVTHCGWSSSLESLVLGVPVVA 370
Query: 78 VPFYGDQLSHVR 89
P + DQ ++ +
Sbjct: 371 FPMWSDQPANAK 382
>gnl|CDD|178584 PLN03007, PLN03007, UDP-glucosyltransferase family protein
Back Show alignment and domain information
Score = 42.2 bits (99), Expect = 2e-05
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
Query: 38 IRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVP-----FYGDQL 85
IR W PQ +L H F++H G NS LE + G+P++ P FY ++L
Sbjct: 349 IRGWAPQVLILDHQATGGFVTHCGWNSLLEGVAAGLPMVTWPVGAEQFYNEKL 401
>gnl|CDD|178275 PLN02670, PLN02670, transferase, transferring glycosyl groups
Back Show alignment and domain information
Score = 40.7 bits (95), Expect = 6e-05
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 34 GNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVD 93
G +H+ W+PQ +L+H + F++H G NS +E + +G +I P +Q + R +
Sbjct: 340 GMIHV-GWVPQVKILSHESVGGFLTHCGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHG 398
Query: 94 LGAGVELS 101
G+E+
Sbjct: 399 KKLGLEVP 406
>gnl|CDD|178364 PLN02764, PLN02764, glycosyltransferase family protein
Back Show alignment and domain information
Score = 40.0 bits (93), Expect = 1e-04
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 41 WIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVD-LGAGVE 99
W+ Q +L+HP+ F+SH G S E++ I+ VP GDQ+ + R + D L VE
Sbjct: 324 WVQQPLILSHPSVGCFVSHCGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVE 383
Query: 100 LS 101
++
Sbjct: 384 VA 385
>gnl|CDD|233077 TIGR00661, MJ1255, conserved hypothetical protein
Back Show alignment and domain information
Score = 39.9 bits (93), Expect = 1e-04
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Query: 32 LPGNVHIRKWIPQQDVLAH-PNCRLFISHGGVNSALEAIHYGIPIIGVPFYG--DQLSHV 88
NV IR+ I + N L I+HGG + EA+ G P+I +P G +Q ++
Sbjct: 227 YNENVEIRR-ITTDNFKELIKNAELVITHGGFSLISEALSLGKPLIVIPDLGQFEQGNNA 285
Query: 89 RHIVDLGAGVELSYFNITLE 108
+ DLG G+ L Y + L
Sbjct: 286 VKLEDLGCGIALEYKELRLL 305
This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases [Hypothetical proteins, Conserved]. Length = 321
>gnl|CDD|177858 PLN02208, PLN02208, glycosyltransferase family protein
Back Show alignment and domain information
Score = 35.8 bits (82), Expect = 0.003
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 41 WIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQLSHVR 89
W+ Q +L HP+ F++H G + E++ ++ +PF DQ+ R
Sbjct: 318 WVQQPLILDHPSIGCFVNHCGPGTIWESLVSDCQMVLIPFLSDQVLFTR 366
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
ID Alignment Graph Length
Definition
Probability
Query
124
PF00201 500
UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera
99.97
PHA03392 507
egt ecdysteroid UDP-glucosyltransferase; Provision
99.97
PLN03004 451
UDP-glycosyltransferase
99.95
PLN02670 472
transferase, transferring glycosyl groups
99.95
PLN02562 448
UDP-glycosyltransferase
99.95
PLN02554 481
UDP-glycosyltransferase family protein
99.95
PLN02410 451
UDP-glucoronosyl/UDP-glucosyl transferase family p
99.94
PLN02207 468
UDP-glycosyltransferase
99.94
PLN02210 456
UDP-glucosyl transferase
99.94
PLN02555 480
limonoid glucosyltransferase
99.94
PLN02167 475
UDP-glycosyltransferase family protein
99.93
PLN02992 481
coniferyl-alcohol glucosyltransferase
99.93
COG1819 406
Glycosyl transferases, related to UDP-glucuronosyl
99.93
PLN02152 455
indole-3-acetate beta-glucosyltransferase
99.93
PLN00164 480
glucosyltransferase; Provisional
99.93
PLN02208 442
glycosyltransferase family protein
99.93
PLN03007 482
UDP-glucosyltransferase family protein
99.93
PLN02448 459
UDP-glycosyltransferase family protein
99.92
PLN02863 477
UDP-glucoronosyl/UDP-glucosyl transferase family p
99.92
PLN02173 449
UDP-glucosyl transferase family protein
99.92
PLN03015 470
UDP-glucosyl transferase
99.92
PLN02764 453
glycosyltransferase family protein
99.92
KOG1192|consensus 496
99.92
cd03784 401
GT1_Gtf_like This family includes the Gtfs, a grou
99.91
PLN00414 446
glycosyltransferase family protein
99.91
TIGR01426 392
MGT glycosyltransferase, MGT family. This model de
99.91
PLN02534 491
UDP-glycosyltransferase
99.88
PF13528 318
Glyco_trans_1_3: Glycosyl transferase family 1
99.79
PF04101 167
Glyco_tran_28_C: Glycosyltransferase family 28 C-t
99.79
PRK12446 352
undecaprenyldiphospho-muramoylpentapeptide beta-N-
99.75
COG0707 357
MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami
99.74
TIGR00661 321
MJ1255 conserved hypothetical protein. This model
99.73
PRK00726 357
murG undecaprenyldiphospho-muramoylpentapeptide be
99.56
cd03785 350
GT1_MurG MurG is an N-acetylglucosaminyltransferas
99.54
COG4671 400
Predicted glycosyl transferase [General function p
99.45
PRK13608 391
diacylglycerol glucosyltransferase; Provisional
99.44
KOG3349|consensus 170
99.44
PRK13609 380
diacylglycerol glucosyltransferase; Provisional
99.39
TIGR01133 348
murG undecaprenyldiphospho-muramoylpentapeptide be
99.37
PLN02605 382
monogalactosyldiacylglycerol synthase
99.36
TIGR03590 279
PseG pseudaminic acid biosynthesis-associated prot
99.32
COG3980 318
spsG Spore coat polysaccharide biosynthesis protei
99.09
TIGR03492 396
conserved hypothetical protein. This protein famil
98.89
COG5017 161
Uncharacterized conserved protein [Function unknow
98.87
TIGR00215 385
lpxB lipid-A-disaccharide synthase. Lipid-A precur
98.83
cd03814 364
GT1_like_2 This family is most closely related to
98.69
TIGR00236 365
wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras
98.67
PRK05749 425
3-deoxy-D-manno-octulosonic-acid transferase; Revi
98.64
cd03823 359
GT1_ExpE7_like This family is most closely related
98.63
PRK00025 380
lpxB lipid-A-disaccharide synthase; Reviewed
98.6
cd03795 357
GT1_like_4 This family is most closely related to
98.57
cd03800 398
GT1_Sucrose_synthase This family is most closely r
98.56
cd03804 351
GT1_wbaZ_like This family is most closely related
98.55
cd03786 363
GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th
98.55
PRK09922 359
UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D
98.49
PLN02871 465
UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
98.48
PF00534 172
Glycos_transf_1: Glycosyl transferases group 1; In
98.48
cd03817 374
GT1_UGDG_like This family is most closely related
98.48
PRK15427 406
colanic acid biosynthesis glycosyltransferase WcaL
98.47
cd05844 367
GT1_like_7 Glycosyltransferases catalyze the trans
98.46
cd03801 374
GT1_YqgM_like This family is most closely related
98.44
PRK15484 380
lipopolysaccharide 1,2-N-acetylglucosaminetransfer
98.43
cd03794 394
GT1_wbuB_like This family is most closely related
98.42
cd03821 375
GT1_Bme6_like This family is most closely related
98.41
cd04946 407
GT1_AmsK_like This family is most closely related
98.4
cd03798 377
GT1_wlbH_like This family is most closely related
98.35
cd03808 359
GT1_cap1E_like This family is most closely related
98.34
cd03799 355
GT1_amsK_like This is a family of GT1 glycosyltran
98.33
cd03812 358
GT1_CapH_like This family is most closely related
98.33
COG1519 419
KdtA 3-deoxy-D-manno-octulosonic-acid transferase
98.32
cd03820 348
GT1_amsD_like This family is most closely related
98.32
cd03805 392
GT1_ALG2_like This family is most closely related
98.31
cd04962 371
GT1_like_5 This family is most closely related to
98.29
TIGR03449 405
mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino
98.25
cd03818 396
GT1_ExpC_like This family is most closely related
98.22
cd03825 365
GT1_wcfI_like This family is most closely related
98.22
cd04951 360
GT1_WbdM_like This family is most closely related
98.2
cd03819 355
GT1_WavL_like This family is most closely related
98.2
TIGR03088 374
stp2 sugar transferase, PEP-CTERM/EpsH1 system ass
98.19
cd03807 365
GT1_WbnK_like This family is most closely related
98.17
cd03816 415
GT1_ALG1_like This family is most closely related
98.15
TIGR02149 388
glgA_Coryne glycogen synthase, Corynebacterium fam
98.13
cd03802 335
GT1_AviGT4_like This family is most closely relate
98.13
cd03822 366
GT1_ecORF704_like This family is most closely rela
98.11
cd03809 365
GT1_mtfB_like This family is most closely related
98.06
cd03811 353
GT1_WabH_like This family is most closely related
98.04
TIGR03087 397
stp1 sugar transferase, PEP-CTERM/EpsH1 system ass
98.01
TIGR02472 439
sucr_P_syn_N sucrose-phosphate synthase, putative,
98.01
cd03792 372
GT1_Trehalose_phosphorylase Trehalose phosphorylas
98.01
cd03813 475
GT1_like_3 This family is most closely related to
97.99
PRK15179 694
Vi polysaccharide biosynthesis protein TviE; Provi
97.99
PLN02275 371
transferase, transferring glycosyl groups
97.98
cd03796 398
GT1_PIG-A_like This family is most closely related
97.96
PRK10307 412
putative glycosyl transferase; Provisional
97.93
PF13692 135
Glyco_trans_1_4: Glycosyl transferases group 1; PD
97.91
cd04949 372
GT1_gtfA_like This family is most closely related
97.89
TIGR03568 365
NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase,
97.88
TIGR02918 500
accessory Sec system glycosylation protein GtfA. M
97.87
cd04955 363
GT1_like_6 This family is most closely related to
97.85
cd03806 419
GT1_ALG11_like This family is most closely related
97.78
PF02350 346
Epimerase_2: UDP-N-acetylglucosamine 2-epimerase;
97.73
PF13844 468
Glyco_transf_41: Glycosyl transferase family 41; P
97.71
cd04950 373
GT1_like_1 Glycosyltransferases catalyze the trans
97.71
TIGR02095 473
glgA glycogen/starch synthases, ADP-glucose type.
97.62
TIGR02468
1050
sucrsPsyn_pln sucrose phosphate synthase/possible
97.62
PF04007 335
DUF354: Protein of unknown function (DUF354); Inte
97.61
cd01635 229
Glycosyltransferase_GTB_type Glycosyltransferases
97.59
PRK14089 347
ipid-A-disaccharide synthase; Provisional
97.56
PLN02846 462
digalactosyldiacylglycerol synthase
97.54
PRK15490 578
Vi polysaccharide biosynthesis protein TviE; Provi
97.47
PLN02501
794
digalactosyldiacylglycerol synthase
97.47
TIGR02470 784
sucr_synth sucrose synthase. This model represents
97.42
PRK09814 333
beta-1,6-galactofuranosyltransferase; Provisional
97.4
PRK10125 405
putative glycosyl transferase; Provisional
97.34
PHA01633 335
putative glycosyl transferase group 1
97.28
PRK14098 489
glycogen synthase; Provisional
97.22
cd03791 476
GT1_Glycogen_synthase_DULL1_like This family is mo
97.2
TIGR03713 519
acc_sec_asp1 accessory Sec system protein Asp1. Th
97.15
PLN00142 815
sucrose synthase
97.15
PLN02949 463
transferase, transferring glycosyl groups
97.12
PRK00654 466
glgA glycogen synthase; Provisional
97.1
PHA01630 331
putative group 1 glycosyl transferase
96.99
PRK14099 485
glycogen synthase; Provisional
96.94
PLN02316 1036
synthase/transferase
96.5
PF13524 92
Glyco_trans_1_2: Glycosyl transferases group 1
96.43
PLN02939 977
transferase, transferring glycosyl groups
96.31
PRK10017 426
colanic acid biosynthesis protein; Provisional
96.25
PRK02155
291
ppnK NAD(+)/NADH kinase family protein; Provisiona
96.23
TIGR02919 438
accessory Sec system glycosyltransferase GtfB. Mem
96.2
COG3914 620
Spy Predicted O-linked N-acetylglucosamine transfe
96.04
TIGR02193 319
heptsyl_trn_I lipopolysaccharide heptosyltransfera
95.94
KOG0853|consensus 495
95.91
KOG4626|consensus 966
95.84
PF07429 360
Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc
95.84
PRK14077
287
pnk inorganic polyphosphate/ATP-NAD kinase; Provis
95.74
PF05159 269
Capsule_synth: Capsule polysaccharide biosynthesis
95.72
TIGR02400 456
trehalose_OtsA alpha,alpha-trehalose-phosphate syn
95.68
PF02684 373
LpxB: Lipid-A-disaccharide synthetase; InterPro: I
95.56
COG0381 383
WecB UDP-N-acetylglucosamine 2-epimerase [Cell env
95.54
COG3660 329
Predicted nucleoside-diphosphate-sugar epimerase [
95.45
PRK03372
306
ppnK inorganic polyphosphate/ATP-NAD kinase; Provi
95.44
PRK01231
295
ppnK inorganic polyphosphate/ATP-NAD kinase; Provi
95.29
PRK01911
292
ppnK inorganic polyphosphate/ATP-NAD kinase; Provi
95.27
PRK04539
296
ppnK inorganic polyphosphate/ATP-NAD kinase; Provi
95.21
PRK10422 352
lipopolysaccharide core biosynthesis protein; Prov
95.14
cd03789 279
GT1_LPS_heptosyltransferase Lipopolysaccharide hep
95.13
PRK10964 322
ADP-heptose:LPS heptosyl transferase I; Provisiona
95.02
PRK01021 608
lpxB lipid-A-disaccharide synthase; Reviewed
94.99
cd03788 460
GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a
94.9
PRK03378
292
ppnK inorganic polyphosphate/ATP-NAD kinase; Provi
94.84
COG0438 381
RfaG Glycosyltransferase [Cell envelope biogenesis
94.75
PRK02797 322
4-alpha-L-fucosyltransferase; Provisional
94.71
PRK03501
264
ppnK inorganic polyphosphate/ATP-NAD kinase; Provi
94.7
PRK02231
272
ppnK inorganic polyphosphate/ATP-NAD kinase; Provi
94.59
TIGR02195 334
heptsyl_trn_II lipopolysaccharide heptosyltransfer
94.53
COG1817 346
Uncharacterized protein conserved in archaea [Func
94.5
PRK04885
265
ppnK inorganic polyphosphate/ATP-NAD kinase; Provi
94.38
PRK10916 348
ADP-heptose:LPS heptosyltransferase II; Provisiona
94.29
PF06258 311
Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP
94.26
cd03793 590
GT1_Glycogen_synthase_GSY2_like Glycogen synthase,
93.86
PRK02649
305
ppnK inorganic polyphosphate/ATP-NAD kinase; Provi
93.81
TIGR02201 344
heptsyl_trn_III lipopolysaccharide heptosyltransfe
93.72
PF01075 247
Glyco_transf_9: Glycosyltransferase family 9 (hept
93.46
TIGR00725 159
conserved hypothetical protein, DprA/Smf-related,
93.05
PF03641 133
Lysine_decarbox: Possible lysine decarboxylase; In
92.61
COG0859 334
RfaF ADP-heptose:LPS heptosyltransferase [Cell env
92.39
PRK01185
271
ppnK inorganic polyphosphate/ATP-NAD kinase; Provi
92.16
PF04464 369
Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate
91.49
PRK14075
256
pnk inorganic polyphosphate/ATP-NAD kinase; Provis
91.47
PLN02727
986
NAD kinase
90.64
PLN03063
797
alpha,alpha-trehalose-phosphate synthase (UDP-form
90.53
PLN02929
301
NADH kinase
90.47
PLN02935
508
Bifunctional NADH kinase/NAD(+) kinase
89.9
PF11071 141
DUF2872: Protein of unknown function (DUF2872); In
89.83
PRK14076
569
pnk inorganic polyphosphate/ATP-NAD kinase; Provis
89.79
COG4370 412
Uncharacterized protein conserved in bacteria [Fun
89.64
PRK03708
277
ppnK inorganic polyphosphate/ATP-NAD kinase; Provi
89.21
TIGR00730 178
conserved hypothetical protein, DprA/Smf-related,
88.55
PRK02645
305
ppnK inorganic polyphosphate/ATP-NAD kinase; Provi
88.51
PF15024
559
Glyco_transf_18: Glycosyltransferase family 18
87.83
COG0297 487
GlgA Glycogen synthase [Carbohydrate transport and
86.72
TIGR03646 144
YtoQ_fam YtoQ family protein. Members of this fami
85.75
PRK14501
726
putative bifunctional trehalose-6-phosphate syntha
85.43
PRK12446
352
undecaprenyldiphospho-muramoylpentapeptide beta-N-
84.63
PRK04761
246
ppnK inorganic polyphosphate/ATP-NAD kinase; Revie
84.57
PF06722 97
DUF1205: Protein of unknown function (DUF1205); In
84.49
KOG1111|consensus 426
84.14
PF05693 633
Glycogen_syn: Glycogen synthase; InterPro: IPR0086
83.88
TIGR02398 487
gluc_glyc_Psyn glucosylglycerol-phosphate synthase
82.93
PRK00561
259
ppnK inorganic polyphosphate/ATP-NAD kinase; Provi
82.28
KOG2941|consensus 444
81.83
PF06506 176
PrpR_N: Propionate catabolism activator; InterPro:
80.63
COG2099 257
CobK Precorrin-6x reductase [Coenzyme metabolism]
80.44
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule
Back Hide alignment and domain information
Probab=99.97 E-value=1.6e-31 Score=199.37 Aligned_cols=124 Identities=41% Similarity=0.744 Sum_probs=108.5
Q ss_pred CCHHHHHHHHHHHhhCCCeEEEEEcCCCCCCCCCcEEEeeccChHHhhcCCCcceEEecCChhhHHHHHHhCCCeeeecc
Q psy10186 1 MSDGMRTLLVTAFSRTGLTVLWRYEGDSIENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPF 80 (124)
Q Consensus 1 l~~~~~~~~~~~l~~~~~~~i~~~g~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~g~P~l~~P~ 80 (124)
+|.+..+++++++++++.+|||++++......++|+++.+|+||.++|.|+++++||||||++|+.||+++|+|+|++|.
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~iW~~~~~~~~~l~~n~~~~~W~PQ~~lL~hp~v~~fitHgG~~s~~Ea~~~gvP~l~~P~ 369 (500)
T PF00201_consen 290 MPEEKLKEIAEAFENLPQRFIWKYEGEPPENLPKNVLIVKWLPQNDLLAHPRVKLFITHGGLNSTQEALYHGVPMLGIPL 369 (500)
T ss_dssp -HHHHHHHHHHHHHCSTTEEEEEETCSHGCHHHTTEEEESS--HHHHHTSTTEEEEEES--HHHHHHHHHCT--EEE-GC
T ss_pred hHHHHHHHHHHHHhhCCCcccccccccccccccceEEEeccccchhhhhcccceeeeeccccchhhhhhhccCCccCCCC
Confidence 35667899999999999999999988666667899999999999999999999999999999999999999999999999
Q ss_pred cccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCCCC
Q psy10186 81 YGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPRRY 124 (124)
Q Consensus 81 ~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~~r 124 (124)
++||..||.++++.|+|+.++.++++.+++.++|+++++|++||
T Consensus 370 ~~DQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~vl~~~~y~ 413 (500)
T PF00201_consen 370 FGDQPRNAARVEEKGVGVVLDKNDLTEEELRAAIREVLENPSYK 413 (500)
T ss_dssp STTHHHHHHHHHHTTSEEEEGGGC-SHHHHHHHHHHHHHSHHHH
T ss_pred cccCCccceEEEEEeeEEEEEecCCcHHHHHHHHHHHHhhhHHH
Confidence 99999999999999999999999999999999999999998874
This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Back Show alignment and domain information
Probab=99.97 E-value=2.5e-30 Score=193.25 Aligned_cols=124 Identities=35% Similarity=0.694 Sum_probs=116.5
Q ss_pred CCHHHHHHHHHHHhhCCCeEEEEEcCCCCC-CCCCcEEEeeccChHHhhcCCCcceEEecCChhhHHHHHHhCCCeeeec
Q psy10186 1 MSDGMRTLLVTAFSRTGLTVLWRYEGDSIE-NLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVP 79 (124)
Q Consensus 1 l~~~~~~~~~~~l~~~~~~~i~~~g~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~g~P~l~~P 79 (124)
+|.+.++.+++++++.+++|||.+++.... ..|+|+.+.+|+||.++|.|+++++||||||.||+.||+++|+|+|++|
T Consensus 312 ~~~~~~~~~l~a~~~l~~~viw~~~~~~~~~~~p~Nv~i~~w~Pq~~lL~hp~v~~fItHGG~~s~~Eal~~GvP~v~iP 391 (507)
T PHA03392 312 MDNEFLQMLLRTFKKLPYNVLWKYDGEVEAINLPANVLTQKWFPQRAVLKHKNVKAFVTQGGVQSTDEAIDALVPMVGLP 391 (507)
T ss_pred CCHHHHHHHHHHHHhCCCeEEEEECCCcCcccCCCceEEecCCCHHHHhcCCCCCEEEecCCcccHHHHHHcCCCEEECC
Confidence 367899999999999999999999875543 6789999999999999999999999999999999999999999999999
Q ss_pred ccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCCCC
Q psy10186 80 FYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPRRY 124 (124)
Q Consensus 80 ~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~~r 124 (124)
.+.||..||+++++.|+|+.++..+++.++|.++++++++||+||
T Consensus 392 ~~~DQ~~Na~rv~~~G~G~~l~~~~~t~~~l~~ai~~vl~~~~y~ 436 (507)
T PHA03392 392 MMGDQFYNTNKYVELGIGRALDTVTVSAAQLVLAIVDVIENPKYR 436 (507)
T ss_pred CCccHHHHHHHHHHcCcEEEeccCCcCHHHHHHHHHHHhCCHHHH
Confidence 999999999999999999999988999999999999999999875
>PLN03004 UDP-glycosyltransferase
Back Show alignment and domain information
Probab=99.95 E-value=3.7e-27 Score=173.80 Aligned_cols=124 Identities=23% Similarity=0.423 Sum_probs=109.8
Q ss_pred CCHHHHHHHHHHHhhCCCeEEEEEcCCC--------CCC-CC---------CcEEEeeccChHHhhcCCCcceEEecCCh
Q psy10186 1 MSDGMRTLLVTAFSRTGLTVLWRYEGDS--------IEN-LP---------GNVHIRKWIPQQDVLAHPNCRLFISHGGV 62 (124)
Q Consensus 1 l~~~~~~~~~~~l~~~~~~~i~~~g~~~--------~~~-~~---------~~v~~~~~~~~~~~l~~~~~d~~i~~gG~ 62 (124)
++.+.+++++.+|+.++.+|||+++... ... .| .|+.+.+|+||.++|.|+++.+||||||+
T Consensus 283 ~~~~q~~ela~gL~~s~~~FlW~~r~~~~~~~~~~~~~~~lp~gf~er~~~~g~~v~~W~PQ~~iL~H~~v~~FvTH~G~ 362 (451)
T PLN03004 283 FSKEQVIEIAVGLEKSGQRFLWVVRNPPELEKTELDLKSLLPEGFLSRTEDKGMVVKSWAPQVPVLNHKAVGGFVTHCGW 362 (451)
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEEcCCccccccccchhhhCChHHHHhccCCcEEEEeeCCHHHHhCCCccceEeccCcc
Confidence 5789999999999999999999998531 111 33 68888999999999999999999999999
Q ss_pred hhHHHHHHhCCCeeeecccccHHHHHHHHHH-cCceeEecCC---CCCHHHHHHHHHHHhcCCCCC
Q psy10186 63 NSALEAIHYGIPIIGVPFYGDQLSHVRHIVD-LGAGVELSYF---NITLESIAWATSIVLNNPRRY 124 (124)
Q Consensus 63 ~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~-~g~g~~~~~~---~~~~~~l~~~l~~ll~~~~~r 124 (124)
||++|++++|+|+|++|.+.||..||+++++ .|+|+.+..+ .+++++|.+++++++++++||
T Consensus 363 nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~~~~e~l~~av~~vm~~~~~r 428 (451)
T PLN03004 363 NSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNESETGFVSSTEVEKRVQEIIGECPVR 428 (451)
T ss_pred hHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEecCCcCCccCHHHHHHHHHHHhcCHHHH
Confidence 9999999999999999999999999999986 6999999743 469999999999999887765
>PLN02670 transferase, transferring glycosyl groups
Back Show alignment and domain information
Probab=99.95 E-value=6.2e-27 Score=173.37 Aligned_cols=121 Identities=22% Similarity=0.382 Sum_probs=106.6
Q ss_pred CCHHHHHHHHHHHhhCCCeEEEEEcCCC-C-----CCCCCc---------EEEeeccChHHhhcCCCcceEEecCChhhH
Q psy10186 1 MSDGMRTLLVTAFSRTGLTVLWRYEGDS-I-----ENLPGN---------VHIRKWIPQQDVLAHPNCRLFISHGGVNSA 65 (124)
Q Consensus 1 l~~~~~~~~~~~l~~~~~~~i~~~g~~~-~-----~~~~~~---------v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~ 65 (124)
|+.+.+.+++.+|+.++.+|||++.+.. . ...|++ +.+.+|+||.++|.|+++.+||||||+||+
T Consensus 291 l~~~q~~ela~gl~~s~~~FlWv~r~~~~~~~~~~~~lp~~f~~~~~~rG~vv~~W~PQ~~IL~H~~v~~FvtHcGwnS~ 370 (472)
T PLN02670 291 LRREEVTELALGLEKSETPFFWVLRNEPGTTQNALEMLPDGFEERVKGRGMIHVGWVPQVKILSHESVGGFLTHCGWNSV 370 (472)
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEEcCCcccccchhhcCChHHHHhccCCCeEEeCcCCHHHHhcCcccceeeecCCcchH
Confidence 5789999999999999999999997521 0 112332 667799999999999999999999999999
Q ss_pred HHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecCC----CCCHHHHHHHHHHHhcCC
Q psy10186 66 LEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYF----NITLESIAWATSIVLNNP 121 (124)
Q Consensus 66 ~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~----~~~~~~l~~~l~~ll~~~ 121 (124)
+|++++|+|+|++|.+.||..||+++++.|+|+.+... .++++++.+++++++.++
T Consensus 371 ~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~~~~~~~e~i~~av~~vm~~~ 430 (472)
T PLN02670 371 VEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDERDGSFTSDSVAESVRLAMVDD 430 (472)
T ss_pred HHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeeccccCCcCcHHHHHHHHHHHhcCc
Confidence 99999999999999999999999999999999998642 378999999999999775
>PLN02562 UDP-glycosyltransferase
Back Show alignment and domain information
Probab=99.95 E-value=7.3e-27 Score=172.52 Aligned_cols=122 Identities=23% Similarity=0.384 Sum_probs=108.4
Q ss_pred CCHHHHHHHHHHHhhCCCeEEEEEcCCC---CC-----CCCCcEEEeeccChHHhhcCCCcceEEecCChhhHHHHHHhC
Q psy10186 1 MSDGMRTLLVTAFSRTGLTVLWRYEGDS---IE-----NLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYG 72 (124)
Q Consensus 1 l~~~~~~~~~~~l~~~~~~~i~~~g~~~---~~-----~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~g 72 (124)
++.+.+.+++.+|+.+|.+|||+++... .. ..++|+.+.+|+||.++|.|+++.+||||||+||++|++++|
T Consensus 287 ~~~~~~~~l~~~l~~~g~~fiW~~~~~~~~~l~~~~~~~~~~~~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~G 366 (448)
T PLN02562 287 IGESNVRTLALALEASGRPFIWVLNPVWREGLPPGYVERVSKQGKVVSWAPQLEVLKHQAVGCYLTHCGWNSTMEAIQCQ 366 (448)
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEEcCCchhhCCHHHHHHhccCEEEEecCCHHHHhCCCccceEEecCcchhHHHHHHcC
Confidence 4778999999999999999999986421 21 145789999999999999999999999999999999999999
Q ss_pred CCeeeecccccHHHHHHHHHHc-CceeEecCCCCCHHHHHHHHHHHhcCCCCC
Q psy10186 73 IPIIGVPFYGDQLSHVRHIVDL-GAGVELSYFNITLESIAWATSIVLNNPRRY 124 (124)
Q Consensus 73 ~P~l~~P~~~~q~~~a~~~~~~-g~g~~~~~~~~~~~~l~~~l~~ll~~~~~r 124 (124)
+|+|++|.+.||+.||+++++. |+|+.+. +++.+++.+++++++++++||
T Consensus 367 vP~l~~P~~~DQ~~na~~~~~~~g~g~~~~--~~~~~~l~~~v~~~l~~~~~r 417 (448)
T PLN02562 367 KRLLCYPVAGDQFVNCAYIVDVWKIGVRIS--GFGQKEVEEGLRKVMEDSGMG 417 (448)
T ss_pred CCEEeCCcccchHHHHHHHHHHhCceeEeC--CCCHHHHHHHHHHHhCCHHHH
Confidence 9999999999999999999874 9988774 578999999999999887765
>PLN02554 UDP-glycosyltransferase family protein
Back Show alignment and domain information
Probab=99.95 E-value=3.1e-27 Score=175.92 Aligned_cols=124 Identities=27% Similarity=0.455 Sum_probs=106.8
Q ss_pred CCHHHHHHHHHHHhhCCCeEEEEEcCCC------------------CCC----CCCcEEEeeccChHHhhcCCCcceEEe
Q psy10186 1 MSDGMRTLLVTAFSRTGLTVLWRYEGDS------------------IEN----LPGNVHIRKWIPQQDVLAHPNCRLFIS 58 (124)
Q Consensus 1 l~~~~~~~~~~~l~~~~~~~i~~~g~~~------------------~~~----~~~~v~~~~~~~~~~~l~~~~~d~~i~ 58 (124)
++.+.+.+++.+|+.++++|||++++.. ..+ ..+|+.+.+|+||.++|.|+++++|||
T Consensus 287 ~~~~~~~~la~~l~~~~~~flW~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~r~~~~g~v~~W~PQ~~iL~H~~v~~Fvt 366 (481)
T PLN02554 287 FSEEQAREIAIALERSGHRFLWSLRRASPNIMKEPPGEFTNLEEILPEGFLDRTKDIGKVIGWAPQVAVLAKPAIGGFVT 366 (481)
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEEcCCcccccccccccccchhhhCChHHHHHhccCceEEeeCCHHHHhCCcccCcccc
Confidence 4678999999999999999999987521 011 345778889999999999999999999
Q ss_pred cCChhhHHHHHHhCCCeeeecccccHHHHHH-HHHHcCceeEecC-----------CCCCHHHHHHHHHHHhc-CCCCC
Q psy10186 59 HGGVNSALEAIHYGIPIIGVPFYGDQLSHVR-HIVDLGAGVELSY-----------FNITLESIAWATSIVLN-NPRRY 124 (124)
Q Consensus 59 ~gG~~t~~ea~~~g~P~l~~P~~~~q~~~a~-~~~~~g~g~~~~~-----------~~~~~~~l~~~l~~ll~-~~~~r 124 (124)
|||+||++|++++|+|+|++|.++||+.||+ .++..|+|+.+.. ..++++++.++|+++++ +++||
T Consensus 367 H~G~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~~~~~~~~~~~~~~~~e~l~~av~~vm~~~~~~r 445 (481)
T PLN02554 367 HCGWNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKYWRGDLLAGEMETVTAEEIERGIRCLMEQDSDVR 445 (481)
T ss_pred cCccchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeeccccccccccccCeEcHHHHHHHHHHHhcCCHHHH
Confidence 9999999999999999999999999999995 5788899998853 35799999999999996 56554
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Back Show alignment and domain information
Probab=99.94 E-value=2.5e-26 Score=169.68 Aligned_cols=120 Identities=28% Similarity=0.425 Sum_probs=108.1
Q ss_pred CCHHHHHHHHHHHhhCCCeEEEEEcCCC---------CC-----CCCCcEEEeeccChHHhhcCCCcceEEecCChhhHH
Q psy10186 1 MSDGMRTLLVTAFSRTGLTVLWRYEGDS---------IE-----NLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSAL 66 (124)
Q Consensus 1 l~~~~~~~~~~~l~~~~~~~i~~~g~~~---------~~-----~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ 66 (124)
++.+.+.+++.+|+.++.+|+|+++... .. +.++|..+.+|+||.++|.|+++++||||||+||++
T Consensus 277 ~~~~q~~ela~gLe~s~~~FlWv~r~~~~~~~~~~~~lp~~f~er~~~~g~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~ 356 (451)
T PLN02410 277 MEINEVMETASGLDSSNQQFLWVIRPGSVRGSEWIESLPKEFSKIISGRGYIVKWAPQKEVLSHPAVGGFWSHCGWNSTL 356 (451)
T ss_pred CCHHHHHHHHHHHHhcCCCeEEEEccCcccccchhhcCChhHHHhccCCeEEEccCCHHHHhCCCccCeeeecCchhHHH
Confidence 4788999999999999999999987421 11 145778999999999999999999999999999999
Q ss_pred HHHHhCCCeeeecccccHHHHHHHHHHc-CceeEecCCCCCHHHHHHHHHHHhcCC
Q psy10186 67 EAIHYGIPIIGVPFYGDQLSHVRHIVDL-GAGVELSYFNITLESIAWATSIVLNNP 121 (124)
Q Consensus 67 ea~~~g~P~l~~P~~~~q~~~a~~~~~~-g~g~~~~~~~~~~~~l~~~l~~ll~~~ 121 (124)
||+++|+|+|++|.+.||+.||+++++. |+|+.+. ..++++++++++++++.++
T Consensus 357 Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~-~~~~~~~v~~av~~lm~~~ 411 (451)
T PLN02410 357 ESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVE-GDLDRGAVERAVKRLMVEE 411 (451)
T ss_pred HHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeC-CcccHHHHHHHHHHHHcCC
Confidence 9999999999999999999999999887 9999987 6789999999999999776
>PLN02207 UDP-glycosyltransferase
Back Show alignment and domain information
Probab=99.94 E-value=2.5e-26 Score=170.01 Aligned_cols=119 Identities=27% Similarity=0.466 Sum_probs=104.4
Q ss_pred CCHHHHHHHHHHHhhCCCeEEEEEcCCCC-----------CCCCCcEEEeeccChHHhhcCCCcceEEecCChhhHHHHH
Q psy10186 1 MSDGMRTLLVTAFSRTGLTVLWRYEGDSI-----------ENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAI 69 (124)
Q Consensus 1 l~~~~~~~~~~~l~~~~~~~i~~~g~~~~-----------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~ 69 (124)
++.+.+++++.+|+.++++|||+++.... +..+++..+.+|+||.++|.|+++++||||||+||++|++
T Consensus 288 ~~~~q~~ela~~l~~~~~~flW~~r~~~~~~~~~lp~~f~er~~~~g~i~~W~PQ~~IL~H~~vg~FvTH~GwnS~~Eai 367 (468)
T PLN02207 288 LRGPLVKEIAHGLELCQYRFLWSLRTEEVTNDDLLPEGFLDRVSGRGMICGWSPQVEILAHKAVGGFVSHCGWNSIVESL 367 (468)
T ss_pred CCHHHHHHHHHHHHHCCCcEEEEEeCCCccccccCCHHHHhhcCCCeEEEEeCCHHHHhcccccceeeecCccccHHHHH
Confidence 57789999999999999999999985221 1145778889999999999999999999999999999999
Q ss_pred HhCCCeeeecccccHHHHHHHHHH-cCceeEec------C-CCCCHHHHHHHHHHHhc
Q psy10186 70 HYGIPIIGVPFYGDQLSHVRHIVD-LGAGVELS------Y-FNITLESIAWATSIVLN 119 (124)
Q Consensus 70 ~~g~P~l~~P~~~~q~~~a~~~~~-~g~g~~~~------~-~~~~~~~l~~~l~~ll~ 119 (124)
++|+|+|++|.+.||+.||+++++ .|+|+.+. . +.+++++|.++|+++++
T Consensus 368 ~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~~~~~~v~~e~i~~av~~vm~ 425 (468)
T PLN02207 368 WFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRVHSDEIVNANEIETAIRCVMN 425 (468)
T ss_pred HcCCCEEecCccccchhhHHHHHHHhCceEEEecccccccCCcccHHHHHHHHHHHHh
Confidence 999999999999999999998877 79998663 1 23589999999999996
>PLN02210 UDP-glucosyl transferase
Back Show alignment and domain information
Probab=99.94 E-value=8.5e-26 Score=167.14 Aligned_cols=122 Identities=25% Similarity=0.497 Sum_probs=106.4
Q ss_pred CCHHHHHHHHHHHhhCCCeEEEEEcCCCC-------CC-C-CCcEEEeeccChHHhhcCCCcceEEecCChhhHHHHHHh
Q psy10186 1 MSDGMRTLLVTAFSRTGLTVLWRYEGDSI-------EN-L-PGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHY 71 (124)
Q Consensus 1 l~~~~~~~~~~~l~~~~~~~i~~~g~~~~-------~~-~-~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~ 71 (124)
++.+.+++++.+|+..+++|||+++.... .+ . +++..+.+|+||.++|.|+++++||||||+||++|++++
T Consensus 282 ~~~~~~~e~a~~l~~~~~~flw~~~~~~~~~~~~~~~~~~~~~~g~v~~w~PQ~~iL~h~~vg~FitH~G~nS~~Eai~~ 361 (456)
T PLN02210 282 SLENQVETIAKALKNRGVPFLWVIRPKEKAQNVQVLQEMVKEGQGVVLEWSPQEKILSHMAISCFVTHCGWNSTIETVVA 361 (456)
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEEeCCccccchhhHHhhccCCCeEEEecCCHHHHhcCcCcCeEEeeCCcccHHHHHHc
Confidence 36788999999999999999999875321 11 1 356678899999999999989999999999999999999
Q ss_pred CCCeeeecccccHHHHHHHHHH-cCceeEecCC----CCCHHHHHHHHHHHhcCCC
Q psy10186 72 GIPIIGVPFYGDQLSHVRHIVD-LGAGVELSYF----NITLESIAWATSIVLNNPR 122 (124)
Q Consensus 72 g~P~l~~P~~~~q~~~a~~~~~-~g~g~~~~~~----~~~~~~l~~~l~~ll~~~~ 122 (124)
|+|+|++|.+.||..||+++++ .|+|+.+..+ .+++++|.+++++++.+++
T Consensus 362 GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~~~l~~av~~~m~~~~ 417 (456)
T PLN02210 362 GVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGELKVEEVERCIEAVTEGPA 417 (456)
T ss_pred CCCEEecccccccHHHHHHHHHHhCeEEEEeccccCCcCCHHHHHHHHHHHhcCch
Confidence 9999999999999999999998 7999988632 5799999999999997764
>PLN02555 limonoid glucosyltransferase
Back Show alignment and domain information
Probab=99.94 E-value=1.4e-25 Score=166.53 Aligned_cols=121 Identities=29% Similarity=0.485 Sum_probs=106.6
Q ss_pred CCHHHHHHHHHHHhhCCCeEEEEEcCC----C----------CCCCCCcEEEeeccChHHhhcCCCcceEEecCChhhHH
Q psy10186 1 MSDGMRTLLVTAFSRTGLTVLWRYEGD----S----------IENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSAL 66 (124)
Q Consensus 1 l~~~~~~~~~~~l~~~~~~~i~~~g~~----~----------~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ 66 (124)
++.+.+.+++.+|+..+++|||+++.. . ..+.++|+.+.+|+||.++|.|+++++||||||+||++
T Consensus 290 ~~~~q~~ela~~l~~~~~~flW~~~~~~~~~~~~~~~lp~~~~~~~~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~ 369 (480)
T PLN02555 290 LKQEQIDEIAYGVLNSGVSFLWVMRPPHKDSGVEPHVLPEEFLEKAGDKGKIVQWCPQEKVLAHPSVACFVTHCGWNSTM 369 (480)
T ss_pred CCHHHHHHHHHHHHhcCCeEEEEEecCcccccchhhcCChhhhhhcCCceEEEecCCHHHHhCCCccCeEEecCCcchHH
Confidence 467899999999999999999998631 0 11235688899999999999999999999999999999
Q ss_pred HHHHhCCCeeeecccccHHHHHHHHHHc-CceeEec-----CCCCCHHHHHHHHHHHhcCC
Q psy10186 67 EAIHYGIPIIGVPFYGDQLSHVRHIVDL-GAGVELS-----YFNITLESIAWATSIVLNNP 121 (124)
Q Consensus 67 ea~~~g~P~l~~P~~~~q~~~a~~~~~~-g~g~~~~-----~~~~~~~~l~~~l~~ll~~~ 121 (124)
||+++|+|+|++|.+.||..|++++++. |+|+.+. ...++++++.++++++++++
T Consensus 370 Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~~~~~~~v~~~~v~~~v~~vm~~~ 430 (480)
T PLN02555 370 EALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRGEAENKLITREEVAECLLEATVGE 430 (480)
T ss_pred HHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEccCCccccCcCcHHHHHHHHHHHhcCc
Confidence 9999999999999999999999999987 9999994 33578999999999999764
>PLN02167 UDP-glycosyltransferase family protein
Back Show alignment and domain information
Probab=99.93 E-value=6.1e-26 Score=168.75 Aligned_cols=121 Identities=29% Similarity=0.480 Sum_probs=103.6
Q ss_pred CCHHHHHHHHHHHhhCCCeEEEEEcCCCC------CCCCCc--------EEEeeccChHHhhcCCCcceEEecCChhhHH
Q psy10186 1 MSDGMRTLLVTAFSRTGLTVLWRYEGDSI------ENLPGN--------VHIRKWIPQQDVLAHPNCRLFISHGGVNSAL 66 (124)
Q Consensus 1 l~~~~~~~~~~~l~~~~~~~i~~~g~~~~------~~~~~~--------v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ 66 (124)
++.+.+.+++.+|+.++++|||+++.... ...|++ ..+.+|+||.++|.|+++++||||||+||++
T Consensus 293 ~~~~~~~ela~~l~~~~~~flw~~~~~~~~~~~~~~~lp~~~~er~~~rg~v~~w~PQ~~iL~h~~vg~fvtH~G~nS~~ 372 (475)
T PLN02167 293 LPAPQIKEIAQALELVGCRFLWSIRTNPAEYASPYEPLPEGFMDRVMGRGLVCGWAPQVEILAHKAIGGFVSHCGWNSVL 372 (475)
T ss_pred CCHHHHHHHHHHHHhCCCcEEEEEecCcccccchhhhCChHHHHHhccCeeeeccCCHHHHhcCcccCeEEeeCCcccHH
Confidence 46788999999999999999999875311 113333 4678999999999999999999999999999
Q ss_pred HHHHhCCCeeeecccccHHHHHHH-HHHcCceeEecC-------CCCCHHHHHHHHHHHhcCC
Q psy10186 67 EAIHYGIPIIGVPFYGDQLSHVRH-IVDLGAGVELSY-------FNITLESIAWATSIVLNNP 121 (124)
Q Consensus 67 ea~~~g~P~l~~P~~~~q~~~a~~-~~~~g~g~~~~~-------~~~~~~~l~~~l~~ll~~~ 121 (124)
|++++|+|+|++|.+.||+.||++ ++..|+|+.+.. ..++++++.+++++++.++
T Consensus 373 Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~ 435 (475)
T PLN02167 373 ESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDYVSAYGEIVKADEIAGAVRSLMDGE 435 (475)
T ss_pred HHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeecccccccCCcccHHHHHHHHHHHhcCC
Confidence 999999999999999999999976 677899998853 2468999999999999754
>PLN02992 coniferyl-alcohol glucosyltransferase
Back Show alignment and domain information
Probab=99.93 E-value=2.2e-25 Score=165.42 Aligned_cols=121 Identities=25% Similarity=0.380 Sum_probs=106.2
Q ss_pred CCHHHHHHHHHHHhhCCCeEEEEEcCC------------------C--CCCCCC---------cEEEeeccChHHhhcCC
Q psy10186 1 MSDGMRTLLVTAFSRTGLTVLWRYEGD------------------S--IENLPG---------NVHIRKWIPQQDVLAHP 51 (124)
Q Consensus 1 l~~~~~~~~~~~l~~~~~~~i~~~g~~------------------~--~~~~~~---------~v~~~~~~~~~~~l~~~ 51 (124)
|+.+.+.+++.+|+.++++|||++.+. + ....|. ++.+.+|+||.++|.|+
T Consensus 276 l~~~q~~ela~gL~~s~~~flW~~r~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~f~eR~~~rg~vv~~W~PQ~~iL~h~ 355 (481)
T PLN02992 276 LSAKQLTELAWGLEMSQQRFVWVVRPPVDGSACSAYFSANGGETRDNTPEYLPEGFVSRTHDRGFVVPSWAPQAEILAHQ 355 (481)
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEeCCcccccccccccCcccccccchhhhCCHHHHHHhcCCCEEEeecCCHHHHhCCc
Confidence 578999999999999999999999531 0 011333 47888999999999999
Q ss_pred CcceEEecCChhhHHHHHHhCCCeeeecccccHHHHHHHHH-HcCceeEecCC--CCCHHHHHHHHHHHhcCC
Q psy10186 52 NCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQLSHVRHIV-DLGAGVELSYF--NITLESIAWATSIVLNNP 121 (124)
Q Consensus 52 ~~d~~i~~gG~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~-~~g~g~~~~~~--~~~~~~l~~~l~~ll~~~ 121 (124)
++.+||||||+||++|++++|+|+|++|.+.||+.||++++ ++|+|+.+... .++.+++.+++++++.++
T Consensus 356 ~vg~FitH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~~~~l~~av~~vm~~~ 428 (481)
T PLN02992 356 AVGGFLTHCGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDPKEVISRSKIEALVRKVMVEE 428 (481)
T ss_pred ccCeeEecCchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCCCCcccHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999995 88999999753 489999999999999765
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Back Show alignment and domain information
Probab=99.93 E-value=2.2e-25 Score=162.98 Aligned_cols=119 Identities=27% Similarity=0.487 Sum_probs=111.3
Q ss_pred HHHHHHHHHHhhCCCeEEEEEcCCC--CCCCCCcEEEeeccChHHhhcCCCcceEEecCChhhHHHHHHhCCCeeeeccc
Q psy10186 4 GMRTLLVTAFSRTGLTVLWRYEGDS--IENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFY 81 (124)
Q Consensus 4 ~~~~~~~~~l~~~~~~~i~~~g~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~g~P~l~~P~~ 81 (124)
++++.+++++.+++.++|+..|+.. ....|.|+.+.+|+|+.+++ ++||+||||||+||++||+++|+|+|++|..
T Consensus 252 ~l~~~~~~a~~~l~~~vi~~~~~~~~~~~~~p~n~~v~~~~p~~~~l--~~ad~vI~hGG~gtt~eaL~~gvP~vv~P~~ 329 (406)
T COG1819 252 ELLAIVLEALADLDVRVIVSLGGARDTLVNVPDNVIVADYVPQLELL--PRADAVIHHGGAGTTSEALYAGVPLVVIPDG 329 (406)
T ss_pred HHHHHHHHHHhcCCcEEEEeccccccccccCCCceEEecCCCHHHHh--hhcCEEEecCCcchHHHHHHcCCCEEEecCC
Confidence 6788999999999999999988733 45688999999999999999 8999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCCCC
Q psy10186 82 GDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPRRY 124 (124)
Q Consensus 82 ~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~~r 124 (124)
.||..||.++++.|+|..+..+.++.+.+.++|++++++++||
T Consensus 330 ~DQ~~nA~rve~~G~G~~l~~~~l~~~~l~~av~~vL~~~~~~ 372 (406)
T COG1819 330 ADQPLNAERVEELGAGIALPFEELTEERLRAAVNEVLADDSYR 372 (406)
T ss_pred cchhHHHHHHHHcCCceecCcccCCHHHHHHHHHHHhcCHHHH
Confidence 9999999999999999999998999999999999999988764
>PLN02152 indole-3-acetate beta-glucosyltransferase
Back Show alignment and domain information
Probab=99.93 E-value=2.7e-25 Score=164.14 Aligned_cols=122 Identities=23% Similarity=0.384 Sum_probs=105.0
Q ss_pred CCHHHHHHHHHHHhhCCCeEEEEEcCCC----------------CC----CCCCcEEEeeccChHHhhcCCCcceEEecC
Q psy10186 1 MSDGMRTLLVTAFSRTGLTVLWRYEGDS----------------IE----NLPGNVHIRKWIPQQDVLAHPNCRLFISHG 60 (124)
Q Consensus 1 l~~~~~~~~~~~l~~~~~~~i~~~g~~~----------------~~----~~~~~v~~~~~~~~~~~l~~~~~d~~i~~g 60 (124)
++.+.+++++.+|+.++.+|||+++... .. ..+++..+.+|+||.++|.|+++.+|||||
T Consensus 274 l~~~q~~ela~gL~~s~~~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~g~v~~W~PQ~~iL~h~~vg~fvtH~ 353 (455)
T PLN02152 274 LSKKQIEELARALIEGKRPFLWVITDKLNREAKIEGEEETEIEKIAGFRHELEEVGMIVSWCSQIEVLRHRAVGCFVTHC 353 (455)
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEEecCcccccccccccccccccchhHHHhccCCeEEEeeCCHHHHhCCcccceEEeeC
Confidence 5789999999999999999999987520 01 145677889999999999999999999999
Q ss_pred ChhhHHHHHHhCCCeeeecccccHHHHHHHHHHc-CceeEec--CC-CCCHHHHHHHHHHHhcCCC
Q psy10186 61 GVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDL-GAGVELS--YF-NITLESIAWATSIVLNNPR 122 (124)
Q Consensus 61 G~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~-g~g~~~~--~~-~~~~~~l~~~l~~ll~~~~ 122 (124)
|+||++|++++|+|+|++|.+.||..||+++++. |+|+.+. .+ .+++++|.+++++++++++
T Consensus 354 G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~e~l~~av~~vm~~~~ 419 (455)
T PLN02152 354 GWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENSEGLVERGEIRRCLEAVMEEKS 419 (455)
T ss_pred CcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecCcCCcCcHHHHHHHHHHHHhhhH
Confidence 9999999999999999999999999999999984 6666553 23 3589999999999997654
>PLN00164 glucosyltransferase; Provisional
Back Show alignment and domain information
Probab=99.93 E-value=6.3e-25 Score=163.39 Aligned_cols=122 Identities=24% Similarity=0.459 Sum_probs=103.6
Q ss_pred CCHHHHHHHHHHHhhCCCeEEEEEcCCCC-----------C-CCCC---------cEEEeeccChHHhhcCCCcceEEec
Q psy10186 1 MSDGMRTLLVTAFSRTGLTVLWRYEGDSI-----------E-NLPG---------NVHIRKWIPQQDVLAHPNCRLFISH 59 (124)
Q Consensus 1 l~~~~~~~~~~~l~~~~~~~i~~~g~~~~-----------~-~~~~---------~v~~~~~~~~~~~l~~~~~d~~i~~ 59 (124)
++.+.+.+++.+|+.++.+|||+++.... . ..|+ ++.+.+|+||.++|.|+.+.+||||
T Consensus 285 ~~~~q~~ela~gL~~s~~~flWv~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~PQ~~iL~h~~vg~fvtH 364 (480)
T PLN00164 285 FDAPQVREIAAGLERSGHRFLWVLRGPPAAGSRHPTDADLDELLPEGFLERTKGRGLVWPTWAPQKEILAHAAVGGFVTH 364 (480)
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEcCCcccccccccccchhhhCChHHHHHhcCCCeEEeecCCHHHHhcCcccCeEEee
Confidence 46788999999999999999999874210 0 0222 3666799999999999999999999
Q ss_pred CChhhHHHHHHhCCCeeeecccccHHHHHHHHHH-cCceeEecCC-----CCCHHHHHHHHHHHhcCCC
Q psy10186 60 GGVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVD-LGAGVELSYF-----NITLESIAWATSIVLNNPR 122 (124)
Q Consensus 60 gG~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~-~g~g~~~~~~-----~~~~~~l~~~l~~ll~~~~ 122 (124)
||+||++|++++|+|+|++|.++||+.||+++++ .|+|+.+..+ .++++++.++|++++.+++
T Consensus 365 ~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~~~~~~~e~l~~av~~vm~~~~ 433 (480)
T PLN00164 365 CGWNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRKRDNFVEAAELERAVRSLMGGGE 433 (480)
T ss_pred cccchHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEeccccccCCcCcHHHHHHHHHHHhcCCc
Confidence 9999999999999999999999999999998854 7999988522 3689999999999998764
>PLN02208 glycosyltransferase family protein
Back Show alignment and domain information
Probab=99.93 E-value=7.4e-25 Score=161.53 Aligned_cols=122 Identities=25% Similarity=0.376 Sum_probs=104.8
Q ss_pred CCHHHHHHHHHHHhhCCCeEEEEEcCC----C-CCCCC---------CcEEEeeccChHHhhcCCCcceEEecCChhhHH
Q psy10186 1 MSDGMRTLLVTAFSRTGLTVLWRYEGD----S-IENLP---------GNVHIRKWIPQQDVLAHPNCRLFISHGGVNSAL 66 (124)
Q Consensus 1 l~~~~~~~~~~~l~~~~~~~i~~~g~~----~-~~~~~---------~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ 66 (124)
++.+.+.+++.+++..+..|+|+...+ . ....| .|+.+.+|+||.++|.|+++.+||||||+||++
T Consensus 264 l~~~q~~e~~~~l~~s~~pf~wv~r~~~~~~~~~~~lp~~f~~r~~~~g~~v~~W~PQ~~iL~H~~v~~FvtHcG~nS~~ 343 (442)
T PLN02208 264 LEKDQFQELCLGMELTGLPFLIAVKPPRGSSTVQEGLPEGFEERVKGRGVVWGGWVQQPLILDHPSIGCFVNHCGPGTIW 343 (442)
T ss_pred CCHHHHHHHHHHHHhCCCcEEEEEeCCCcccchhhhCCHHHHHHHhcCCcEeeccCCHHHHhcCCccCeEEccCCchHHH
Confidence 467889999998877888888877643 1 11233 578888999999999999999999999999999
Q ss_pred HHHHhCCCeeeecccccHHHHHHHHHH-cCceeEecCCC---CCHHHHHHHHHHHhcCCC
Q psy10186 67 EAIHYGIPIIGVPFYGDQLSHVRHIVD-LGAGVELSYFN---ITLESIAWATSIVLNNPR 122 (124)
Q Consensus 67 ea~~~g~P~l~~P~~~~q~~~a~~~~~-~g~g~~~~~~~---~~~~~l~~~l~~ll~~~~ 122 (124)
|++++|+|+|++|.+.||..||+++++ .|+|+.+..++ ++++++.+++++++++++
T Consensus 344 Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~~~~~l~~ai~~~m~~~~ 403 (442)
T PLN02208 344 ESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREKTGWFSKESLSNAIKSVMDKDS 403 (442)
T ss_pred HHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEeccccCCcCcHHHHHHHHHHHhcCCc
Confidence 999999999999999999999998877 79999997544 899999999999997753
>PLN03007 UDP-glucosyltransferase family protein
Back Show alignment and domain information
Probab=99.93 E-value=5.2e-25 Score=164.09 Aligned_cols=121 Identities=21% Similarity=0.344 Sum_probs=102.3
Q ss_pred CCHHHHHHHHHHHhhCCCeEEEEEcCCC--------CCC------CCCcEEEeeccChHHhhcCCCcceEEecCChhhHH
Q psy10186 1 MSDGMRTLLVTAFSRTGLTVLWRYEGDS--------IEN------LPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSAL 66 (124)
Q Consensus 1 l~~~~~~~~~~~l~~~~~~~i~~~g~~~--------~~~------~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ 66 (124)
++.+.+.+++++|+..+++|||+++... ..+ .+.|+.+.+|+||.++|.|+++++||||||+||++
T Consensus 298 ~~~~~~~~~~~~l~~~~~~flw~~~~~~~~~~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~ 377 (482)
T PLN03007 298 FKNEQLFEIAAGLEGSGQNFIWVVRKNENQGEKEEWLPEGFEERTKGKGLIIRGWAPQVLILDHQATGGFVTHCGWNSLL 377 (482)
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEEecCCcccchhhcCCHHHHHHhccCCEEEecCCCHHHHhccCccceeeecCcchHHH
Confidence 3577899999999999999999988531 111 25578889999999999999999999999999999
Q ss_pred HHHHhCCCeeeecccccHHHHHHHHHH---cCceeEe------cCCCCCHHHHHHHHHHHhcCC
Q psy10186 67 EAIHYGIPIIGVPFYGDQLSHVRHIVD---LGAGVEL------SYFNITLESIAWATSIVLNNP 121 (124)
Q Consensus 67 ea~~~g~P~l~~P~~~~q~~~a~~~~~---~g~g~~~------~~~~~~~~~l~~~l~~ll~~~ 121 (124)
||+++|+|+|++|.+.||+.||+++++ .|+++.. ..+.+++++|.+++++++.++
T Consensus 378 Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~ 441 (482)
T PLN03007 378 EGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLVKVKGDFISREKVEKAVREVIVGE 441 (482)
T ss_pred HHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEeccccccccccCcccHHHHHHHHHHHhcCc
Confidence 999999999999999999999998874 3444422 234579999999999999876
>PLN02448 UDP-glycosyltransferase family protein
Back Show alignment and domain information
Probab=99.92 E-value=1.1e-24 Score=161.62 Aligned_cols=121 Identities=24% Similarity=0.376 Sum_probs=105.1
Q ss_pred CCHHHHHHHHHHHhhCCCeEEEEEcCC--CCCC-CCCcEEEeeccChHHhhcCCCcceEEecCChhhHHHHHHhCCCeee
Q psy10186 1 MSDGMRTLLVTAFSRTGLTVLWRYEGD--SIEN-LPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIG 77 (124)
Q Consensus 1 l~~~~~~~~~~~l~~~~~~~i~~~g~~--~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~g~P~l~ 77 (124)
++.+.+.+++++|++.+++|||++..+ ...+ .++|+.+.+|+||.++|.|+++++||||||+||++||+++|+|+|+
T Consensus 287 ~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~v~~w~pQ~~iL~h~~v~~fvtHgG~nS~~eal~~GvP~l~ 366 (459)
T PLN02448 287 VSSAQMDEIAAGLRDSGVRFLWVARGEASRLKEICGDMGLVVPWCDQLKVLCHSSVGGFWTHCGWNSTLEAVFAGVPMLT 366 (459)
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEEcCchhhHhHhccCCEEEeccCCHHHHhccCccceEEecCchhHHHHHHHcCCCEEe
Confidence 356789999999999999999987643 1222 2358888999999999999999999999999999999999999999
Q ss_pred ecccccHHHHHHHHHH-cCceeEecC-----CCCCHHHHHHHHHHHhcCC
Q psy10186 78 VPFYGDQLSHVRHIVD-LGAGVELSY-----FNITLESIAWATSIVLNNP 121 (124)
Q Consensus 78 ~P~~~~q~~~a~~~~~-~g~g~~~~~-----~~~~~~~l~~~l~~ll~~~ 121 (124)
+|.+.||+.||+++++ .|+|+.+.. ..+++++|+++++++++++
T Consensus 367 ~P~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~l~~av~~vl~~~ 416 (459)
T PLN02448 367 FPLFWDQPLNSKLIVEDWKIGWRVKREVGEETLVGREEIAELVKRFMDLE 416 (459)
T ss_pred ccccccchhhHHHHHHHhCceEEEecccccCCcCcHHHHHHHHHHHhcCC
Confidence 9999999999999998 488887742 2468999999999999864
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Back Show alignment and domain information
Probab=99.92 E-value=5.8e-25 Score=163.40 Aligned_cols=123 Identities=24% Similarity=0.452 Sum_probs=103.9
Q ss_pred CCHHHHHHHHHHHhhCCCeEEEEEcCCC-----CCCCC---------CcEEEeeccChHHhhcCCCcceEEecCChhhHH
Q psy10186 1 MSDGMRTLLVTAFSRTGLTVLWRYEGDS-----IENLP---------GNVHIRKWIPQQDVLAHPNCRLFISHGGVNSAL 66 (124)
Q Consensus 1 l~~~~~~~~~~~l~~~~~~~i~~~g~~~-----~~~~~---------~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ 66 (124)
++.+.+.+++++|++++++|||+++... ....| .++.+.+|+||.++|.|+++++||||||+||++
T Consensus 296 ~~~~~~~ela~gL~~~~~~flw~~~~~~~~~~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~vL~h~~v~~fvtH~G~nS~~ 375 (477)
T PLN02863 296 LTKEQMEALASGLEKSGVHFIWCVKEPVNEESDYSNIPSGFEDRVAGRGLVIRGWAPQVAILSHRAVGAFLTHCGWNSVL 375 (477)
T ss_pred CCHHHHHHHHHHHHhCCCcEEEEECCCcccccchhhCCHHHHHHhccCCEEecCCCCHHHHhcCCCcCeEEecCCchHHH
Confidence 4678899999999999999999997421 11122 357778999999999999999999999999999
Q ss_pred HHHHhCCCeeeecccccHHHHHHHHHH-cCceeEecC---CCCCHHHHHHHHHHHh-cCCCC
Q psy10186 67 EAIHYGIPIIGVPFYGDQLSHVRHIVD-LGAGVELSY---FNITLESIAWATSIVL-NNPRR 123 (124)
Q Consensus 67 ea~~~g~P~l~~P~~~~q~~~a~~~~~-~g~g~~~~~---~~~~~~~l~~~l~~ll-~~~~~ 123 (124)
||+++|+|+|++|.+.||+.||+++++ .|+|+.+.. ...+.+++.+++++++ ++++|
T Consensus 376 Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~~~~~~~~~~v~~~v~~~m~~~~~~ 437 (477)
T PLN02863 376 EGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEGADTVPDSDELARVFMESVSENQVE 437 (477)
T ss_pred HHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccCCCCCcCHHHHHHHHHHHhhccHHH
Confidence 999999999999999999999999765 699998853 2358999999999988 44443
>PLN02173 UDP-glucosyl transferase family protein
Back Show alignment and domain information
Probab=99.92 E-value=1.7e-24 Score=159.75 Aligned_cols=120 Identities=23% Similarity=0.452 Sum_probs=103.6
Q ss_pred CCHHHHHHHHHHHhhCCCeEEEEEcCCC---CC-C----C-CCcEEEeeccChHHhhcCCCcceEEecCChhhHHHHHHh
Q psy10186 1 MSDGMRTLLVTAFSRTGLTVLWRYEGDS---IE-N----L-PGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHY 71 (124)
Q Consensus 1 l~~~~~~~~~~~l~~~~~~~i~~~g~~~---~~-~----~-~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~ 71 (124)
++.+.+.+++.+| .+.+|+|++..+. .. + . ++|+.+.+|+||.++|.|+++.+||||||+||++|++++
T Consensus 277 ~~~~~~~ela~gL--s~~~flWvvr~~~~~~lp~~~~~~~~~~~~~i~~W~PQ~~iL~H~~v~~FvtHcGwnS~~Eai~~ 354 (449)
T PLN02173 277 LSSEQMEEIASAI--SNFSYLWVVRASEESKLPPGFLETVDKDKSLVLKWSPQLQVLSNKAIGCFMTHCGWNSTMEGLSL 354 (449)
T ss_pred CCHHHHHHHHHHh--cCCCEEEEEeccchhcccchHHHhhcCCceEEeCCCCHHHHhCCCccceEEecCccchHHHHHHc
Confidence 4778999999999 6678999997421 11 1 2 577899999999999999999999999999999999999
Q ss_pred CCCeeeecccccHHHHHHHHHHc-CceeEecCC----CCCHHHHHHHHHHHhcCCC
Q psy10186 72 GIPIIGVPFYGDQLSHVRHIVDL-GAGVELSYF----NITLESIAWATSIVLNNPR 122 (124)
Q Consensus 72 g~P~l~~P~~~~q~~~a~~~~~~-g~g~~~~~~----~~~~~~l~~~l~~ll~~~~ 122 (124)
|+|+|++|.+.||..||+++++. |+|+.+..+ .++++++.+++++++.+++
T Consensus 355 GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~~~~~~~~~e~v~~av~~vm~~~~ 410 (449)
T PLN02173 355 GVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAEKESGIAKREEIEFSIKEVMEGEK 410 (449)
T ss_pred CCCEEecCchhcchHHHHHHHHHhCceEEEeecccCCcccHHHHHHHHHHHhcCCh
Confidence 99999999999999999999986 999887532 2589999999999997764
>PLN03015 UDP-glucosyl transferase
Back Show alignment and domain information
Probab=99.92 E-value=4.9e-24 Score=157.70 Aligned_cols=119 Identities=24% Similarity=0.451 Sum_probs=103.6
Q ss_pred CCHHHHHHHHHHHhhCCCeEEEEEcCC------------CCC-CCCCc---------EEEeeccChHHhhcCCCcceEEe
Q psy10186 1 MSDGMRTLLVTAFSRTGLTVLWRYEGD------------SIE-NLPGN---------VHIRKWIPQQDVLAHPNCRLFIS 58 (124)
Q Consensus 1 l~~~~~~~~~~~l~~~~~~~i~~~g~~------------~~~-~~~~~---------v~~~~~~~~~~~l~~~~~d~~i~ 58 (124)
++.+.+.+++.+|+.++.+|||++... +.. ..|++ +.+.+|+||.++|.|+++.+|||
T Consensus 280 ~~~~q~~ela~gl~~s~~~FlWv~r~~~~~~~~~~~~~~~~~~~lp~~f~er~~~rGl~v~~W~PQ~~vL~h~~vg~fvt 359 (470)
T PLN03015 280 LTFEQTVELAWGLELSGQRFVWVLRRPASYLGASSSDDDQVSASLPEGFLDRTRGVGLVVTQWAPQVEILSHRSIGGFLS 359 (470)
T ss_pred CCHHHHHHHHHHHHhCCCcEEEEEecCccccccccccccchhhcCChHHHHhhccCceEEEecCCHHHHhccCccCeEEe
Confidence 578999999999999999999998631 011 23444 56779999999999999999999
Q ss_pred cCChhhHHHHHHhCCCeeeecccccHHHHHHHH-HHcCceeEec----CCCCCHHHHHHHHHHHhc
Q psy10186 59 HGGVNSALEAIHYGIPIIGVPFYGDQLSHVRHI-VDLGAGVELS----YFNITLESIAWATSIVLN 119 (124)
Q Consensus 59 ~gG~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~-~~~g~g~~~~----~~~~~~~~l~~~l~~ll~ 119 (124)
|||+||++|++++|+|++++|.+.||..||+++ +..|+|+.+. ...++++++.++|+++++
T Consensus 360 H~GwnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~~~~v~~e~i~~~v~~lm~ 425 (470)
T PLN03015 360 HCGWSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPSEKVIGREEVASLVRKIVA 425 (470)
T ss_pred cCCchhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEecccccCCccCHHHHHHHHHHHHc
Confidence 999999999999999999999999999999999 5669999985 235799999999999995
>PLN02764 glycosyltransferase family protein
Back Show alignment and domain information
Probab=99.92 E-value=2.8e-24 Score=158.46 Aligned_cols=121 Identities=27% Similarity=0.327 Sum_probs=104.2
Q ss_pred CCHHHHHHHHHHHhhCCCeEEEEEcCCC-----CCCC---------CCcEEEeeccChHHhhcCCCcceEEecCChhhHH
Q psy10186 1 MSDGMRTLLVTAFSRTGLTVLWRYEGDS-----IENL---------PGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSAL 66 (124)
Q Consensus 1 l~~~~~~~~~~~l~~~~~~~i~~~g~~~-----~~~~---------~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ 66 (124)
++.+.+.+++.+|+..+.+|+|++.... .... ...+.+.+|+||.++|.|+++++||||||+||++
T Consensus 270 ~~~~q~~ela~gL~~s~~pflwv~r~~~~~~~~~~~lp~~f~~r~~grG~v~~~W~PQ~~vL~h~~v~~FvtH~G~nS~~ 349 (453)
T PLN02764 270 LEKDQFQELCLGMELTGSPFLVAVKPPRGSSTIQEALPEGFEERVKGRGVVWGGWVQQPLILSHPSVGCFVSHCGFGSMW 349 (453)
T ss_pred CCHHHHHHHHHHHHhCCCCeEEEEeCCCCCcchhhhCCcchHhhhccCCcEEeCCCCHHHHhcCcccCeEEecCCchHHH
Confidence 4678999999999999999999987421 1112 3345667999999999999999999999999999
Q ss_pred HHHHhCCCeeeecccccHHHHHHHHHH-cCceeEecCC---CCCHHHHHHHHHHHhcCC
Q psy10186 67 EAIHYGIPIIGVPFYGDQLSHVRHIVD-LGAGVELSYF---NITLESIAWATSIVLNNP 121 (124)
Q Consensus 67 ea~~~g~P~l~~P~~~~q~~~a~~~~~-~g~g~~~~~~---~~~~~~l~~~l~~ll~~~ 121 (124)
|++++|+|+|++|.+.||+.||+++++ .|+|+.+..+ .+++++++++++++++++
T Consensus 350 Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~~~~~~e~i~~av~~vm~~~ 408 (453)
T PLN02764 350 ESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREETGWFSKESLRDAINSVMKRD 408 (453)
T ss_pred HHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccccCCccCHHHHHHHHHHHhcCC
Confidence 999999999999999999999999965 7999887533 579999999999999775
>KOG1192|consensus
Back Show alignment and domain information
Probab=99.92 E-value=2.5e-24 Score=160.47 Aligned_cols=123 Identities=37% Similarity=0.642 Sum_probs=107.6
Q ss_pred CCHHHHHHHHHHHhhC-CCeEEEEEcCCC-------CCC-CCCcEEEeeccChHHh-hcCCCcceEEecCChhhHHHHHH
Q psy10186 1 MSDGMRTLLVTAFSRT-GLTVLWRYEGDS-------IEN-LPGNVHIRKWIPQQDV-LAHPNCRLFISHGGVNSALEAIH 70 (124)
Q Consensus 1 l~~~~~~~~~~~l~~~-~~~~i~~~g~~~-------~~~-~~~~v~~~~~~~~~~~-l~~~~~d~~i~~gG~~t~~ea~~ 70 (124)
+|.+...+++.+++.+ +++|+|++.... ..+ .++|+...+|+||.++ +.|+++++||||||+||++|+++
T Consensus 293 lp~~~~~~l~~~l~~~~~~~FiW~~~~~~~~~~~~~~~~~~~~nV~~~~W~PQ~~lll~H~~v~~FvTHgG~nSt~E~~~ 372 (496)
T KOG1192|consen 293 LPEEQKKELAKALESLQGVTFLWKYRPDDSIYFPEGLPNRGRGNVVLSKWAPQNDLLLDHPAVGGFVTHGGWNSTLESIY 372 (496)
T ss_pred CCHHHHHHHHHHHHhCCCceEEEEecCCcchhhhhcCCCCCcCceEEecCCCcHHHhcCCCcCcEEEECCcccHHHHHHh
Confidence 6889999999999999 889999998742 222 2568999999999998 47899999999999999999999
Q ss_pred hCCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCCC
Q psy10186 71 YGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPRR 123 (124)
Q Consensus 71 ~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~~ 123 (124)
+|+|++++|.++||..||+.+++.|.+.+....+.+..++.+++.+++++++|
T Consensus 373 ~GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~~~~~~~~~~~~~~~~~il~~~~y 425 (496)
T KOG1192|consen 373 SGVPMVCVPLFGDQPLNARLLVRHGGGGVLDKRDLVSEELLEAIKEILENEEY 425 (496)
T ss_pred cCCceecCCccccchhHHHHHHhCCCEEEEehhhcCcHHHHHHHHHHHcChHH
Confidence 99999999999999999999999988887776666666688888888888776
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin
Back Show alignment and domain information
Probab=99.91 E-value=2.2e-24 Score=157.05 Aligned_cols=118 Identities=31% Similarity=0.554 Sum_probs=106.5
Q ss_pred HHHHHHHHHHHhhCCCeEEEEEcCCCC--CCCCCcEEEeeccChHHhhcCCCcceEEecCChhhHHHHHHhCCCeeeecc
Q psy10186 3 DGMRTLLVTAFSRTGLTVLWRYEGDSI--ENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPF 80 (124)
Q Consensus 3 ~~~~~~~~~~l~~~~~~~i~~~g~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~g~P~l~~P~ 80 (124)
.+.+..+++++...+.+++|.+|.... ...++|+++.+|+|+.+++ +.||++|||||+||++|++++|+|+|++|.
T Consensus 255 ~~~~~~~~~a~~~~~~~~i~~~g~~~~~~~~~~~~v~~~~~~p~~~ll--~~~d~~I~hgG~~t~~eal~~GvP~v~~P~ 332 (401)
T cd03784 255 EALARLDVEAVATLGQRAILSLGWGGLGAEDLPDNVRVVDFVPHDWLL--PRCAAVVHHGGAGTTAAALRAGVPQLVVPF 332 (401)
T ss_pred HHHHHHHHHHHHHcCCeEEEEccCccccccCCCCceEEeCCCCHHHHh--hhhheeeecCCchhHHHHHHcCCCEEeeCC
Confidence 456788889999889999999987643 2457899999999999999 779999999999999999999999999999
Q ss_pred cccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCC
Q psy10186 81 YGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPR 122 (124)
Q Consensus 81 ~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~ 122 (124)
..||..||+++++.|+|+.+..++++.+++.++++++++++.
T Consensus 333 ~~dQ~~~a~~~~~~G~g~~l~~~~~~~~~l~~al~~~l~~~~ 374 (401)
T cd03784 333 FGDQPFWAARVAELGAGPALDPRELTAERLAAALRRLLDPPS 374 (401)
T ss_pred CCCcHHHHHHHHHCCCCCCCCcccCCHHHHHHHHHHHhCHHH
Confidence 999999999999999999998777899999999999997653
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
>PLN00414 glycosyltransferase family protein
Back Show alignment and domain information
Probab=99.91 E-value=3.6e-24 Score=158.06 Aligned_cols=121 Identities=21% Similarity=0.291 Sum_probs=103.4
Q ss_pred CCHHHHHHHHHHHhhCCCeEEEEEcCC----C-CCCC---------CCcEEEeeccChHHhhcCCCcceEEecCChhhHH
Q psy10186 1 MSDGMRTLLVTAFSRTGLTVLWRYEGD----S-IENL---------PGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSAL 66 (124)
Q Consensus 1 l~~~~~~~~~~~l~~~~~~~i~~~g~~----~-~~~~---------~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ 66 (124)
++.+.+.+++.+|+..+.+|+|++... . .... ...+.+.+|+||.++|.|+++++||||||+||++
T Consensus 265 ~~~~q~~e~a~gL~~s~~~Flwvvr~~~~~~~~~~~lp~~f~~r~~~~g~vv~~w~PQ~~vL~h~~v~~fvtH~G~nS~~ 344 (446)
T PLN00414 265 FEKDQFQEFCLGMELTGLPFLIAVMPPKGSSTVQEALPEGFEERVKGRGIVWEGWVEQPLILSHPSVGCFVNHCGFGSMW 344 (446)
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEEecCCCcccchhhCChhHHHHhcCCCeEEeccCCHHHHhcCCccceEEecCchhHHH
Confidence 457889999999999999999998652 1 0112 2234556999999999999999999999999999
Q ss_pred HHHHhCCCeeeecccccHHHHHHHHH-HcCceeEecCC---CCCHHHHHHHHHHHhcCC
Q psy10186 67 EAIHYGIPIIGVPFYGDQLSHVRHIV-DLGAGVELSYF---NITLESIAWATSIVLNNP 121 (124)
Q Consensus 67 ea~~~g~P~l~~P~~~~q~~~a~~~~-~~g~g~~~~~~---~~~~~~l~~~l~~ll~~~ 121 (124)
|++++|+|+|++|.+.||..||++++ ..|+|+.+..+ .++++++.+++++++.++
T Consensus 345 Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~i~~~v~~~m~~~ 403 (446)
T PLN00414 345 ESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDSGWFSKESLRDTVKSVMDKD 403 (446)
T ss_pred HHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccCCccCHHHHHHHHHHHhcCC
Confidence 99999999999999999999999996 57999998643 389999999999999765
>TIGR01426 MGT glycosyltransferase, MGT family
Back Show alignment and domain information
Probab=99.91 E-value=2.4e-23 Score=151.45 Aligned_cols=119 Identities=34% Similarity=0.570 Sum_probs=107.3
Q ss_pred HHHHHHHHHHhhCCCeEEEEEcCCC----CCCCCCcEEEeeccChHHhhcCCCcceEEecCChhhHHHHHHhCCCeeeec
Q psy10186 4 GMRTLLVTAFSRTGLTVLWRYEGDS----IENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVP 79 (124)
Q Consensus 4 ~~~~~~~~~l~~~~~~~i~~~g~~~----~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~g~P~l~~P 79 (124)
+.+.++++++.+.+++++|..|+.. ....++|+.+.+|+|+.+++ +.||++|||||++|++|++++|+|+|++|
T Consensus 241 ~~~~~~~~al~~~~~~~i~~~g~~~~~~~~~~~~~~v~~~~~~p~~~ll--~~~~~~I~hgG~~t~~Eal~~G~P~v~~p 318 (392)
T TIGR01426 241 SFYRTCVEAFRDLDWHVVLSVGRGVDPADLGELPPNVEVRQWVPQLEIL--KKADAFITHGGMNSTMEALFNGVPMVAVP 318 (392)
T ss_pred HHHHHHHHHHhcCCCeEEEEECCCCChhHhccCCCCeEEeCCCCHHHHH--hhCCEEEECCCchHHHHHHHhCCCEEecC
Confidence 4678899999999999999987652 23467899999999999988 77999999999999999999999999999
Q ss_pred ccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCCCC
Q psy10186 80 FYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPRRY 124 (124)
Q Consensus 80 ~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~~r 124 (124)
...||..|++++++.|+|..+..++++.+++.+++++++.+++||
T Consensus 319 ~~~dq~~~a~~l~~~g~g~~l~~~~~~~~~l~~ai~~~l~~~~~~ 363 (392)
T TIGR01426 319 QGADQPMTARRIAELGLGRHLPPEEVTAEKLREAVLAVLSDPRYA 363 (392)
T ss_pred CcccHHHHHHHHHHCCCEEEeccccCCHHHHHHHHHHHhcCHHHH
Confidence 999999999999999999999878889999999999999987653
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
>PLN02534 UDP-glycosyltransferase
Back Show alignment and domain information
Probab=99.88 E-value=8.2e-22 Score=146.84 Aligned_cols=119 Identities=24% Similarity=0.434 Sum_probs=102.0
Q ss_pred CCHHHHHHHHHHHhhCCCeEEEEEcCCC---------C----C-C-CCCcEEEeeccChHHhhcCCCcceEEecCChhhH
Q psy10186 1 MSDGMRTLLVTAFSRTGLTVLWRYEGDS---------I----E-N-LPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSA 65 (124)
Q Consensus 1 l~~~~~~~~~~~l~~~~~~~i~~~g~~~---------~----~-~-~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~ 65 (124)
++.+.+.+++.+|+.++.+|||+++.+. . . . .+.++.+.+|+||.++|.|+++.+||||||+||+
T Consensus 296 ~~~~q~~e~a~gl~~~~~~flW~~r~~~~~~~~~~~~~p~gf~~~~~~~g~~v~~w~pq~~iL~h~~v~~fvtH~G~ns~ 375 (491)
T PLN02534 296 LVPSQLIELGLGLEASKKPFIWVIKTGEKHSELEEWLVKENFEERIKGRGLLIKGWAPQVLILSHPAIGGFLTHCGWNST 375 (491)
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEEecCccccchhhhcCchhhHHhhccCCeeccCCCCHHHHhcCCccceEEecCccHHH
Confidence 4678899999999999999999998421 1 1 1 2457778899999999999999999999999999
Q ss_pred HHHHHhCCCeeeecccccHHHHHHHHHH-cCceeEecC---------C----CCCHHHHHHHHHHHhc
Q psy10186 66 LEAIHYGIPIIGVPFYGDQLSHVRHIVD-LGAGVELSY---------F----NITLESIAWATSIVLN 119 (124)
Q Consensus 66 ~ea~~~g~P~l~~P~~~~q~~~a~~~~~-~g~g~~~~~---------~----~~~~~~l~~~l~~ll~ 119 (124)
+||+++|+|+|++|.+.||..|++++++ .|+|+.+.. + .++++++++++++++.
T Consensus 376 ~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~~~~~~~~~~~~~~~~~~v~~eev~~~v~~~m~ 443 (491)
T PLN02534 376 IEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRVGVEVPVRWGDEERVGVLVKKDEVEKAVKTLMD 443 (491)
T ss_pred HHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEecccccccccccccccCccCHHHHHHHHHHHhc
Confidence 9999999999999999999999999975 498887631 1 2689999999999996
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Back Show alignment and domain information
Probab=99.79 E-value=1.6e-18 Score=122.76 Aligned_cols=107 Identities=25% Similarity=0.381 Sum_probs=92.2
Q ss_pred HHHHHHhhCC-CeEEEEEcCCCCCCCCCcEEEeecc--ChHHhhcCCCcceEEecCChhhHHHHHHhCCCeeeecc--cc
Q psy10186 8 LLVTAFSRTG-LTVLWRYEGDSIENLPGNVHIRKWI--PQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPF--YG 82 (124)
Q Consensus 8 ~~~~~l~~~~-~~~i~~~g~~~~~~~~~~v~~~~~~--~~~~~l~~~~~d~~i~~gG~~t~~ea~~~g~P~l~~P~--~~ 82 (124)
.+++++...+ .++++. |........+|+.+..+. +..+.+ +.||++||+||++|++|++++|+|+|++|. +.
T Consensus 206 ~~~~~l~~~~~~~~~v~-g~~~~~~~~~ni~~~~~~~~~~~~~m--~~ad~vIs~~G~~t~~Ea~~~g~P~l~ip~~~~~ 282 (318)
T PF13528_consen 206 DLIEALKALPDYQFIVF-GPNAADPRPGNIHVRPFSTPDFAELM--AAADLVISKGGYTTISEALALGKPALVIPRPGQD 282 (318)
T ss_pred HHHHHHHhCCCCeEEEE-cCCcccccCCCEEEeecChHHHHHHH--HhCCEEEECCCHHHHHHHHHcCCCEEEEeCCCCc
Confidence 5677777776 677776 665544458899999976 456666 889999999999999999999999999999 67
Q ss_pred cHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHH
Q psy10186 83 DQLSHVRHIVDLGAGVELSYFNITLESIAWATSIV 117 (124)
Q Consensus 83 ~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~l 117 (124)
||..||+.++++|+|..+..++++.+.|.+.|+++
T Consensus 283 EQ~~~a~~l~~~G~~~~~~~~~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 283 EQEYNARKLEELGLGIVLSQEDLTPERLAEFLERL 317 (318)
T ss_pred hHHHHHHHHHHCCCeEEcccccCCHHHHHHHHhcC
Confidence 99999999999999999998899999999998864
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases
Back Show alignment and domain information
Probab=99.79 E-value=2.8e-20 Score=121.35 Aligned_cols=104 Identities=25% Similarity=0.421 Sum_probs=84.4
Q ss_pred CCeEEEEEcCCCC-------CCCCCcEEEeeccC-hHHhhcCCCcceEEecCChhhHHHHHHhCCCeeeecccc----cH
Q psy10186 17 GLTVLWRYEGDSI-------ENLPGNVHIRKWIP-QQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYG----DQ 84 (124)
Q Consensus 17 ~~~~i~~~g~~~~-------~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~gG~~t~~ea~~~g~P~l~~P~~~----~q 84 (124)
.+++++++|+... .....++.+.+|.+ ..+++ ..||++|||||++|++|++++|+|+|++|... +|
T Consensus 31 ~~~viv~~G~~~~~~~~~~~~~~~~~v~~~~~~~~m~~~m--~~aDlvIs~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q 108 (167)
T PF04101_consen 31 NIQVIVQTGKNNYEELKIKVENFNPNVKVFGFVDNMAELM--AAADLVISHAGAGTIAEALALGKPAIVIPLPGAADNHQ 108 (167)
T ss_dssp HCCCCCCCTTCECHHHCCCHCCTTCCCEEECSSSSHHHHH--HHHSEEEECS-CHHHHHHHHCT--EEEE--TTT-T-CH
T ss_pred CcEEEEEECCCcHHHHHHHHhccCCcEEEEechhhHHHHH--HHcCEEEeCCCccHHHHHHHcCCCeeccCCCCcchHHH
Confidence 4789999998642 11236899999999 55566 89999999999999999999999999999987 99
Q ss_pred HHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCC
Q psy10186 85 LSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPR 122 (124)
Q Consensus 85 ~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~ 122 (124)
..|+..+++.|.+..+.....+.++|.+.|.+++.++.
T Consensus 109 ~~na~~~~~~g~~~~~~~~~~~~~~L~~~i~~l~~~~~ 146 (167)
T PF04101_consen 109 EENAKELAKKGAAIMLDESELNPEELAEAIEELLSDPE 146 (167)
T ss_dssp HHHHHHHHHCCCCCCSECCC-SCCCHHHHHHCHCCCHH
T ss_pred HHHHHHHHHcCCccccCcccCCHHHHHHHHHHHHcCcH
Confidence 99999999999999998777778899999999887654
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Back Show alignment and domain information
Probab=99.75 E-value=5.1e-18 Score=122.42 Aligned_cols=103 Identities=17% Similarity=0.254 Sum_probs=86.9
Q ss_pred CCeEEEEEcCCCCCC---CCCcEEEeecc-Ch-HHhhcCCCcceEEecCChhhHHHHHHhCCCeeeeccc-----ccHHH
Q psy10186 17 GLTVLWRYEGDSIEN---LPGNVHIRKWI-PQ-QDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFY-----GDQLS 86 (124)
Q Consensus 17 ~~~~i~~~g~~~~~~---~~~~v~~~~~~-~~-~~~l~~~~~d~~i~~gG~~t~~ea~~~g~P~l~~P~~-----~~q~~ 86 (124)
+++++|++|+++.++ ...++.+.+|+ +. .+++ ..||++|||||++|+.|++++|+|+|++|.. .+|..
T Consensus 214 ~~~vv~~~G~~~~~~~~~~~~~~~~~~f~~~~m~~~~--~~adlvIsr~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~ 291 (352)
T PRK12446 214 KYQIVHLCGKGNLDDSLQNKEGYRQFEYVHGELPDIL--AITDFVISRAGSNAIFEFLTLQKPMLLIPLSKFASRGDQIL 291 (352)
T ss_pred CcEEEEEeCCchHHHHHhhcCCcEEecchhhhHHHHH--HhCCEEEECCChhHHHHHHHcCCCEEEEcCCCCCCCchHHH
Confidence 489999999875322 11355667887 44 4455 7899999999999999999999999999984 48999
Q ss_pred HHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCC
Q psy10186 87 HVRHIVDLGAGVELSYFNITLESIAWATSIVLNNP 121 (124)
Q Consensus 87 ~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~ 121 (124)
||+.+++.|++..+..++++.+.+.+++.++++|+
T Consensus 292 Na~~l~~~g~~~~l~~~~~~~~~l~~~l~~ll~~~ 326 (352)
T PRK12446 292 NAESFERQGYASVLYEEDVTVNSLIKHVEELSHNN 326 (352)
T ss_pred HHHHHHHCCCEEEcchhcCCHHHHHHHHHHHHcCH
Confidence 99999999999999888899999999999998775
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Back Show alignment and domain information
Probab=99.74 E-value=5.3e-17 Score=117.07 Aligned_cols=115 Identities=22% Similarity=0.325 Sum_probs=94.4
Q ss_pred HHHHHHHHHhhCCCeEEEEEcCCCCCC----C-CCc-EEEeeccChHHhhcCCCcceEEecCChhhHHHHHHhCCCeeee
Q psy10186 5 MRTLLVTAFSRTGLTVLWRYEGDSIEN----L-PGN-VHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGV 78 (124)
Q Consensus 5 ~~~~~~~~l~~~~~~~i~~~g~~~~~~----~-~~~-v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~g~P~l~~ 78 (124)
.+.+.+..+.+ ++++++++|++...+ . ..+ +.+.+|++.+..++ ..+|++||++|++|+.|.+++|+|+|++
T Consensus 201 ~v~~~~~~l~~-~~~v~~~~G~~~~~~~~~~~~~~~~~~v~~f~~dm~~~~-~~ADLvIsRaGa~Ti~E~~a~g~P~Ili 278 (357)
T COG0707 201 LVPEALAKLAN-RIQVIHQTGKNDLEELKSAYNELGVVRVLPFIDDMAALL-AAADLVISRAGALTIAELLALGVPAILV 278 (357)
T ss_pred HHHHHHHHhhh-CeEEEEEcCcchHHHHHHHHhhcCcEEEeeHHhhHHHHH-HhccEEEeCCcccHHHHHHHhCCCEEEe
Confidence 34444444444 589999999975211 1 112 88899998777555 8999999999999999999999999999
Q ss_pred ccc----ccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCC
Q psy10186 79 PFY----GDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNP 121 (124)
Q Consensus 79 P~~----~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~ 121 (124)
|.. .+|..||+.+++.|+|..+..++++.+++.+.|.+++.+|
T Consensus 279 P~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l~~~i~~l~~~~ 325 (357)
T COG0707 279 PYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLAELILRLLSNP 325 (357)
T ss_pred CCCCCccchHHHHHHHHHhCCCEEEeccccCCHHHHHHHHHHHhcCH
Confidence 984 4899999999999999999999999999999999999764
>TIGR00661 MJ1255 conserved hypothetical protein
Back Show alignment and domain information
Probab=99.73 E-value=8.7e-17 Score=114.61 Aligned_cols=112 Identities=25% Similarity=0.383 Sum_probs=86.0
Q ss_pred HHHHHHHHhhCCC-eEEEEEcCCC-CCCCCCcEEEeeccC--hHHhhcCCCcceEEecCChhhHHHHHHhCCCeeeeccc
Q psy10186 6 RTLLVTAFSRTGL-TVLWRYEGDS-IENLPGNVHIRKWIP--QQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFY 81 (124)
Q Consensus 6 ~~~~~~~l~~~~~-~~i~~~g~~~-~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~~gG~~t~~ea~~~g~P~l~~P~~ 81 (124)
...+++.+.+.+. .+++. +.+. ....++|+.+.+|.+ ..+.+ +.||++|||||++|++|++++|+|++++|..
T Consensus 200 ~~~l~~~l~~~~~~~~i~~-~~~~~~~~~~~~v~~~~~~~~~~~~~l--~~ad~vI~~~G~~t~~Ea~~~g~P~l~ip~~ 276 (321)
T TIGR00661 200 RYKILELLGKIANVKFVCY-SYEVAKNSYNENVEIRRITTDNFKELI--KNAELVITHGGFSLISEALSLGKPLIVIPDL 276 (321)
T ss_pred HHHHHHHHHhCCCeEEEEe-CCCCCccccCCCEEEEECChHHHHHHH--HhCCEEEECCChHHHHHHHHcCCCEEEEcCC
Confidence 3456777777653 44432 2222 233567999999986 34455 8999999999999999999999999999985
Q ss_pred c--cHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCCC
Q psy10186 82 G--DQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPRR 123 (124)
Q Consensus 82 ~--~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~~ 123 (124)
. ||..||+.+++.|+|+.+..+++ ++.+++.+++++++|
T Consensus 277 ~~~eQ~~na~~l~~~g~~~~l~~~~~---~~~~~~~~~~~~~~~ 317 (321)
T TIGR00661 277 GQFEQGNNAVKLEDLGCGIALEYKEL---RLLEAILDIRNMKRY 317 (321)
T ss_pred CcccHHHHHHHHHHCCCEEEcChhhH---HHHHHHHhccccccc
Confidence 4 89999999999999999976554 566667777777776
This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Back Show alignment and domain information
Probab=99.56 E-value=7.7e-14 Score=100.38 Aligned_cols=111 Identities=24% Similarity=0.329 Sum_probs=88.2
Q ss_pred HHHhhCC--CeEEEEEcCCCCC------CCCCcEEEeeccC-hHHhhcCCCcceEEecCChhhHHHHHHhCCCeeeecc-
Q psy10186 11 TAFSRTG--LTVLWRYEGDSIE------NLPGNVHIRKWIP-QQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPF- 80 (124)
Q Consensus 11 ~~l~~~~--~~~i~~~g~~~~~------~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~gG~~t~~ea~~~g~P~l~~P~- 80 (124)
+++.+.. ..+++.+|..... +..-++.+.+|++ ..+++ +.+|++|+|+|.++++||+++|+|+|++|.
T Consensus 204 ~a~~~~~~~~~~~~~~G~g~~~~~~~~~~~~~~v~~~g~~~~~~~~~--~~~d~~i~~~g~~~~~Ea~~~g~Pvv~~~~~ 281 (357)
T PRK00726 204 EALALLPEALQVIHQTGKGDLEEVRAAYAAGINAEVVPFIDDMAAAY--AAADLVICRAGASTVAELAAAGLPAILVPLP 281 (357)
T ss_pred HHHHHhhhCcEEEEEcCCCcHHHHHHHhhcCCcEEEeehHhhHHHHH--HhCCEEEECCCHHHHHHHHHhCCCEEEecCC
Confidence 4544432 2566777875311 1222378889984 45666 899999999999999999999999999986
Q ss_pred ---cccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCCC
Q psy10186 81 ---YGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPRR 123 (124)
Q Consensus 81 ---~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~~ 123 (124)
.++|..|++.+.+.|.|..+..++++.+++.++++++++++++
T Consensus 282 ~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll~~~~~ 327 (357)
T PRK00726 282 HAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELLSDPER 327 (357)
T ss_pred CCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHHcCHHH
Confidence 3689999999999999999988788899999999999988764
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis
Back Show alignment and domain information
Probab=99.54 E-value=1.5e-13 Score=98.28 Aligned_cols=113 Identities=25% Similarity=0.337 Sum_probs=89.2
Q ss_pred HHHHHHhhCCCeEEEEEcCCCC-------CCCCCcEEEeecc-ChHHhhcCCCcceEEecCChhhHHHHHHhCCCeeeec
Q psy10186 8 LLVTAFSRTGLTVLWRYEGDSI-------ENLPGNVHIRKWI-PQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVP 79 (124)
Q Consensus 8 ~~~~~l~~~~~~~i~~~g~~~~-------~~~~~~v~~~~~~-~~~~~l~~~~~d~~i~~gG~~t~~ea~~~g~P~l~~P 79 (124)
+.++.+.+.+..+++.+|.... .+..+|+.+.+|. +..+++ ..||++++++|.+|++||+++|+|+++.|
T Consensus 202 ~a~~~l~~~~~~~~~i~G~g~~~~l~~~~~~~~~~v~~~g~~~~~~~~l--~~ad~~v~~sg~~t~~Eam~~G~Pvv~~~ 279 (350)
T cd03785 202 EALAELLRKRLQVIHQTGKGDLEEVKKAYEELGVNYEVFPFIDDMAAAY--AAADLVISRAGASTVAELAALGLPAILIP 279 (350)
T ss_pred HHHHHhhccCeEEEEEcCCccHHHHHHHHhccCCCeEEeehhhhHHHHH--HhcCEEEECCCHhHHHHHHHhCCCEEEee
Confidence 3344444345677777777531 1124689999998 445566 89999999999999999999999999987
Q ss_pred c----cccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCC
Q psy10186 80 F----YGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPR 122 (124)
Q Consensus 80 ~----~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~ 122 (124)
. ..+|..|++.+.+.|.|..+..++.+.+++.++++++++++.
T Consensus 280 ~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll~~~~ 326 (350)
T cd03785 280 LPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELLSDPE 326 (350)
T ss_pred cCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHhcCHH
Confidence 5 367899999999999999998766789999999999998764
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
>COG4671 Predicted glycosyl transferase [General function prediction only]
Back Show alignment and domain information
Probab=99.45 E-value=1.5e-12 Score=92.41 Aligned_cols=118 Identities=24% Similarity=0.239 Sum_probs=95.2
Q ss_pred HHHHHHHHHHhh-CCCe--EEEEEcCCCC----------CCCCCcEEEeeccChHHhhcCCCcceEEecCChhhHHHHHH
Q psy10186 4 GMRTLLVTAFSR-TGLT--VLWRYEGDSI----------ENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIH 70 (124)
Q Consensus 4 ~~~~~~~~~l~~-~~~~--~i~~~g~~~~----------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~ 70 (124)
+++...+++-.- .+.+ .++++|+.-+ ...-+++.+..|.....-+. ..++.+|+.||+||++|-++
T Consensus 234 eLi~~~l~A~~~l~~l~~~~~ivtGP~MP~~~r~~l~~~A~~~p~i~I~~f~~~~~~ll-~gA~~vVSm~GYNTvCeILs 312 (400)
T COG4671 234 ELIETALAAAQLLAGLNHKWLIVTGPFMPEAQRQKLLASAPKRPHISIFEFRNDFESLL-AGARLVVSMGGYNTVCEILS 312 (400)
T ss_pred HHHHHHHHHhhhCCCCCcceEEEeCCCCCHHHHHHHHHhcccCCCeEEEEhhhhHHHHH-HhhheeeecccchhhhHHHh
Confidence 455555555544 3443 6677887421 12347999999987655444 79999999999999999999
Q ss_pred hCCCeeeeccc---ccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCC
Q psy10186 71 YGIPIIGVPFY---GDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPR 122 (124)
Q Consensus 71 ~g~P~l~~P~~---~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~ 122 (124)
.|||.+++|+. .||...|++++++|+.-++.+++++++.++++|...+..|+
T Consensus 313 ~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL~pe~lt~~~La~al~~~l~~P~ 367 (400)
T COG4671 313 FGKPALIVPRAAPREEQLIRAQRLEELGLVDVLLPENLTPQNLADALKAALARPS 367 (400)
T ss_pred CCCceEEeccCCCcHHHHHHHHHHHhcCcceeeCcccCChHHHHHHHHhcccCCC
Confidence 99999999995 48999999999999999999999999999999999987554
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Back Show alignment and domain information
Probab=99.44 E-value=1.1e-12 Score=95.93 Aligned_cols=113 Identities=18% Similarity=0.164 Sum_probs=88.4
Q ss_pred HHHHHHHHHh-hC-CCeEEEEEcCCC-----C---CCCCCcEEEeeccChHHhhcCCCcceEEecCChhhHHHHHHhCCC
Q psy10186 5 MRTLLVTAFS-RT-GLTVLWRYEGDS-----I---ENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIP 74 (124)
Q Consensus 5 ~~~~~~~~l~-~~-~~~~i~~~g~~~-----~---~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~g~P 74 (124)
-++.+++++. .. +.++++++|++. . ....+++.+.+|++...-++ ..+|++|+.+|..|+.||+++|+|
T Consensus 217 ~~~~li~~~~~~~~~~~~vvv~G~~~~l~~~l~~~~~~~~~v~~~G~~~~~~~~~-~~aDl~I~k~gg~tl~EA~a~G~P 295 (391)
T PRK13608 217 GFDTMITDILAKSANAQVVMICGKSKELKRSLTAKFKSNENVLILGYTKHMNEWM-ASSQLMITKPGGITISEGLARCIP 295 (391)
T ss_pred hHHHHHHHHHhcCCCceEEEEcCCCHHHHHHHHHHhccCCCeEEEeccchHHHHH-HhhhEEEeCCchHHHHHHHHhCCC
Confidence 3455666543 22 468888888653 1 11345789999997655333 899999999999999999999999
Q ss_pred eeee-cccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCC
Q psy10186 75 IIGV-PFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPR 122 (124)
Q Consensus 75 ~l~~-P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~ 122 (124)
+|+. |..++|..|+..+.+.|+|+... +.+++.+++.++++|++
T Consensus 296 vI~~~~~pgqe~~N~~~~~~~G~g~~~~----~~~~l~~~i~~ll~~~~ 340 (391)
T PRK13608 296 MIFLNPAPGQELENALYFEEKGFGKIAD----TPEEAIKIVASLTNGNE 340 (391)
T ss_pred EEECCCCCCcchhHHHHHHhCCcEEEeC----CHHHHHHHHHHHhcCHH
Confidence 9998 66677889999999999998876 78899999999997764
>KOG3349|consensus
Back Show alignment and domain information
Probab=99.44 E-value=2.8e-12 Score=81.07 Aligned_cols=96 Identities=19% Similarity=0.270 Sum_probs=73.5
Q ss_pred HHHHHHHhhCCC-eEEEEEcCCCC-CC-------CCCc--EEEeeccCh-HHhhcCCCcceEEecCChhhHHHHHHhCCC
Q psy10186 7 TLLVTAFSRTGL-TVLWRYEGDSI-EN-------LPGN--VHIRKWIPQ-QDVLAHPNCRLFISHGGVNSALEAIHYGIP 74 (124)
Q Consensus 7 ~~~~~~l~~~~~-~~i~~~g~~~~-~~-------~~~~--v~~~~~~~~-~~~l~~~~~d~~i~~gG~~t~~ea~~~g~P 74 (124)
++..+.|.+.|+ +.+++.|+... .. .-.. +...+|-|. .+-+ +.+|++|+|+|+||++|.+..|+|
T Consensus 25 ~~~~~~L~k~G~~kLiiQ~Grg~~~~~d~~~~~~k~~gl~id~y~f~psl~e~I--~~AdlVIsHAGaGS~letL~l~KP 102 (170)
T KOG3349|consen 25 EEFLQELQKRGFTKLIIQIGRGQPFFGDPIDLIRKNGGLTIDGYDFSPSLTEDI--RSADLVISHAGAGSCLETLRLGKP 102 (170)
T ss_pred HHHHHHHHHcCccEEEEEecCCccCCCCHHHhhcccCCeEEEEEecCccHHHHH--hhccEEEecCCcchHHHHHHcCCC
Confidence 455677788886 89999999741 11 1122 344556675 4444 679999999999999999999999
Q ss_pred eeeeccc----ccHHHHHHHHHHcCceeEecCCC
Q psy10186 75 IIGVPFY----GDQLSHVRHIVDLGAGVELSYFN 104 (124)
Q Consensus 75 ~l~~P~~----~~q~~~a~~~~~~g~g~~~~~~~ 104 (124)
.|+++.. ++|...|..+++.|.-....+++
T Consensus 103 livVvNd~LMDNHQ~ELA~qL~~egyL~~C~ps~ 136 (170)
T KOG3349|consen 103 LIVVVNDSLMDNHQLELAKQLAEEGYLYYCTPST 136 (170)
T ss_pred EEEEeChHhhhhHHHHHHHHHHhcCcEEEeeccc
Confidence 9999874 68999999999999887776544
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Back Show alignment and domain information
Probab=99.39 E-value=4.8e-12 Score=91.90 Aligned_cols=111 Identities=18% Similarity=0.220 Sum_probs=87.9
Q ss_pred HHHHHHHHhhC-CCeEEEEEcCCC---------CCCCCCcEEEeeccChH-HhhcCCCcceEEecCChhhHHHHHHhCCC
Q psy10186 6 RTLLVTAFSRT-GLTVLWRYEGDS---------IENLPGNVHIRKWIPQQ-DVLAHPNCRLFISHGGVNSALEAIHYGIP 74 (124)
Q Consensus 6 ~~~~~~~l~~~-~~~~i~~~g~~~---------~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~gG~~t~~ea~~~g~P 74 (124)
+..+++++.+. +.++++++|.+. ....+.++.+.+|++.. +++ ..+|++|+.+|..|++||+++|+|
T Consensus 218 ~~~li~~l~~~~~~~~viv~G~~~~~~~~l~~~~~~~~~~v~~~g~~~~~~~l~--~~aD~~v~~~gg~t~~EA~a~g~P 295 (380)
T PRK13609 218 VKELCQSLMSVPDLQVVVVCGKNEALKQSLEDLQETNPDALKVFGYVENIDELF--RVTSCMITKPGGITLSEAAALGVP 295 (380)
T ss_pred HHHHHHHHhhCCCcEEEEEeCCCHHHHHHHHHHHhcCCCcEEEEechhhHHHHH--HhccEEEeCCCchHHHHHHHhCCC
Confidence 45667777654 478888877542 11234589999999875 455 789999999999999999999999
Q ss_pred eeee-cccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCC
Q psy10186 75 IIGV-PFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPR 122 (124)
Q Consensus 75 ~l~~-P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~ 122 (124)
+|+. |..+++..|+..+++.|+++... +.+++.+++.++++|++
T Consensus 296 vI~~~~~~g~~~~n~~~~~~~G~~~~~~----~~~~l~~~i~~ll~~~~ 340 (380)
T PRK13609 296 VILYKPVPGQEKENAMYFERKGAAVVIR----DDEEVFAKTEALLQDDM 340 (380)
T ss_pred EEECCCCCCcchHHHHHHHhCCcEEEEC----CHHHHHHHHHHHHCCHH
Confidence 9985 66677888999999999998764 78999999999998764
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
Back Show alignment and domain information
Probab=99.37 E-value=1.1e-11 Score=88.63 Aligned_cols=111 Identities=23% Similarity=0.355 Sum_probs=81.7
Q ss_pred HHHhhCCCeEEEEEcCCCCCC------CCCcEEEeecc--ChHHhhcCCCcceEEecCChhhHHHHHHhCCCeeeeccc-
Q psy10186 11 TAFSRTGLTVLWRYEGDSIEN------LPGNVHIRKWI--PQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFY- 81 (124)
Q Consensus 11 ~~l~~~~~~~i~~~g~~~~~~------~~~~v~~~~~~--~~~~~l~~~~~d~~i~~gG~~t~~ea~~~g~P~l~~P~~- 81 (124)
+.+.+.+.++++++|+..... ..+-...+.+. +..+++ ..||++|+++|.++++||+++|+|+|..|..
T Consensus 203 ~~l~~~~~~~~~~~g~~~~~~l~~~~~~~~l~~~v~~~~~~~~~~l--~~ad~~v~~~g~~~l~Ea~~~g~Pvv~~~~~~ 280 (348)
T TIGR01133 203 AKLAEKGIQIVHQTGKNDLEKVKNVYQELGIEAIVTFIDENMAAAY--AAADLVISRAGASTVAELAAAGVPAILIPYPY 280 (348)
T ss_pred HHHhhcCcEEEEECCcchHHHHHHHHhhCCceEEecCcccCHHHHH--HhCCEEEECCChhHHHHHHHcCCCEEEeeCCC
Confidence 333344567777677643110 11111222233 456667 8899999999988999999999999998763
Q ss_pred --ccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCCC
Q psy10186 82 --GDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPRR 123 (124)
Q Consensus 82 --~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~~ 123 (124)
.+|..|++.+.+.+.|..+.+.+.+.+++.++++++++|+++
T Consensus 281 ~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~~~~ 324 (348)
T TIGR01133 281 AADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLDPAN 324 (348)
T ss_pred CccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcCHHH
Confidence 468889999999999999887777899999999999988753
RL J Bacteriol 1993 Mar;175(6):1841-3
>PLN02605 monogalactosyldiacylglycerol synthase
Back Show alignment and domain information
Probab=99.36 E-value=8.3e-12 Score=90.96 Aligned_cols=99 Identities=21% Similarity=0.280 Sum_probs=79.7
Q ss_pred CCeEEEEEcCCC-----CC--CCCCcEEEeeccChHHhhcCCCcceEEecCChhhHHHHHHhCCCeeeeccc-ccHHHHH
Q psy10186 17 GLTVLWRYEGDS-----IE--NLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFY-GDQLSHV 88 (124)
Q Consensus 17 ~~~~i~~~g~~~-----~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~g~P~l~~P~~-~~q~~~a 88 (124)
+.++++++|++. .. ....++++.+|+++...++ ..+|++|+.+|.+|++||+++|+|+|+.+.. +.+..|+
T Consensus 241 ~~~~~vi~G~~~~~~~~L~~~~~~~~v~~~G~~~~~~~l~-~aaDv~V~~~g~~ti~EAma~g~PvI~~~~~pgqe~gn~ 319 (382)
T PLN02605 241 IGQVVVICGRNKKLQSKLESRDWKIPVKVRGFVTNMEEWM-GACDCIITKAGPGTIAEALIRGLPIILNGYIPGQEEGNV 319 (382)
T ss_pred CceEEEEECCCHHHHHHHHhhcccCCeEEEeccccHHHHH-HhCCEEEECCCcchHHHHHHcCCCEEEecCCCccchhhH
Confidence 467788888753 11 1234688999998666554 7999999999999999999999999998654 4556899
Q ss_pred HHHHHcCceeEecCCCCCHHHHHHHHHHHhcC
Q psy10186 89 RHIVDLGAGVELSYFNITLESIAWATSIVLNN 120 (124)
Q Consensus 89 ~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~ 120 (124)
..+.+.|.|.... +.+++.+++.+++.+
T Consensus 320 ~~i~~~g~g~~~~----~~~~la~~i~~ll~~ 347 (382)
T PLN02605 320 PYVVDNGFGAFSE----SPKEIARIVAEWFGD 347 (382)
T ss_pred HHHHhCCceeecC----CHHHHHHHHHHHHcC
Confidence 9999999998764 789999999999876
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG
Back Show alignment and domain information
Probab=99.32 E-value=7.9e-12 Score=87.79 Aligned_cols=84 Identities=14% Similarity=0.203 Sum_probs=67.3
Q ss_pred HHHHHHHHHhhC--CCeEEEEEcCCCCC--------CCCCcEEEeeccChHHhhcCCCcceEEecCChhhHHHHHHhCCC
Q psy10186 5 MRTLLVTAFSRT--GLTVLWRYEGDSIE--------NLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIP 74 (124)
Q Consensus 5 ~~~~~~~~l~~~--~~~~i~~~g~~~~~--------~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~g~P 74 (124)
....+++++.+. +.++.+++|+.... ...+|+.+..+++++.-++ ..||++||+|| +|++|++++|+|
T Consensus 185 ~~~~~l~~l~~~~~~~~i~vv~G~~~~~~~~l~~~~~~~~~i~~~~~~~~m~~lm-~~aDl~Is~~G-~T~~E~~a~g~P 262 (279)
T TIGR03590 185 LTLKLLSALAESQINISITLVTGSSNPNLDELKKFAKEYPNIILFIDVENMAELM-NEADLAIGAAG-STSWERCCLGLP 262 (279)
T ss_pred HHHHHHHHHhccccCceEEEEECCCCcCHHHHHHHHHhCCCEEEEeCHHHHHHHH-HHCCEEEECCc-hHHHHHHHcCCC
Confidence 345667777654 46888899885421 2356899999998875444 89999999999 899999999999
Q ss_pred eeeecccccHHHHHHH
Q psy10186 75 IIGVPFYGDQLSHVRH 90 (124)
Q Consensus 75 ~l~~P~~~~q~~~a~~ 90 (124)
+|++|...+|..||+.
T Consensus 263 ~i~i~~~~nQ~~~a~~ 278 (279)
T TIGR03590 263 SLAICLAENQQSNSQQ 278 (279)
T ss_pred EEEEEecccHHHHhhh
Confidence 9999999999999975
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Back Show alignment and domain information
Probab=99.09 E-value=9.8e-10 Score=76.29 Aligned_cols=117 Identities=15% Similarity=0.198 Sum_probs=91.5
Q ss_pred HHHHHHHHHhhCCCeEEEEEcCCCC--------CCCCCcEEEeeccChHHhhcCCCcceEEecCChhhHHHHHHhCCCee
Q psy10186 5 MRTLLVTAFSRTGLTVLWRYEGDSI--------ENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPII 76 (124)
Q Consensus 5 ~~~~~~~~l~~~~~~~i~~~g~~~~--------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~g~P~l 76 (124)
+.-+++..|.+.++.+-+++|..++ .+..+|+.+......+..|+ ..||+.|+.||. |++|+++.|+|.+
T Consensus 173 lt~kvl~~L~~~~~nl~iV~gs~~p~l~~l~k~~~~~~~i~~~~~~~dma~LM-ke~d~aI~AaGs-tlyEa~~lgvP~l 250 (318)
T COG3980 173 LTLKVLAELEQKNVNLHIVVGSSNPTLKNLRKRAEKYPNINLYIDTNDMAELM-KEADLAISAAGS-TLYEALLLGVPSL 250 (318)
T ss_pred hHHHHHHHhhccCeeEEEEecCCCcchhHHHHHHhhCCCeeeEecchhHHHHH-Hhcchheeccch-HHHHHHHhcCCce
Confidence 4566777777777778788885331 23567899888888666555 799999999998 8999999999999
Q ss_pred eecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCCCC
Q psy10186 77 GVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPRRY 124 (124)
Q Consensus 77 ~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~~r 124 (124)
++|...+|...|..++.+|+..-+... +........+.++..|+.+|
T Consensus 251 ~l~~a~NQ~~~a~~f~~lg~~~~l~~~-l~~~~~~~~~~~i~~d~~~r 297 (318)
T COG3980 251 VLPLAENQIATAKEFEALGIIKQLGYH-LKDLAKDYEILQIQKDYARR 297 (318)
T ss_pred EEeeeccHHHHHHHHHhcCchhhccCC-CchHHHHHHHHHhhhCHHHh
Confidence 999999999999999999988777533 45566666677777666543
>TIGR03492 conserved hypothetical protein
Back Show alignment and domain information
Probab=98.89 E-value=5.2e-09 Score=76.92 Aligned_cols=81 Identities=22% Similarity=0.232 Sum_probs=64.0
Q ss_pred EEEeeccC-hHHhhcCCCcceEEecCChhhHHHHHHhCCCeeeecccccHHHHHHHHHHc----CceeEecCCCCCHHHH
Q psy10186 36 VHIRKWIP-QQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDL----GAGVELSYFNITLESI 110 (124)
Q Consensus 36 v~~~~~~~-~~~~l~~~~~d~~i~~gG~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~----g~g~~~~~~~~~~~~l 110 (124)
+.+..+.. ..+++ ..||++|+.+|..| .|++.+|+|+|++|....|. |+..+++. |.+..+.. .+.+.+
T Consensus 281 ~~v~~~~~~~~~~l--~~ADlvI~rSGt~T-~E~a~lg~P~Ilip~~~~q~-na~~~~~~~~l~g~~~~l~~--~~~~~l 354 (396)
T TIGR03492 281 LEVLLGRGAFAEIL--HWADLGIAMAGTAT-EQAVGLGKPVIQLPGKGPQF-TYGFAEAQSRLLGGSVFLAS--KNPEQA 354 (396)
T ss_pred eEEEechHhHHHHH--HhCCEEEECcCHHH-HHHHHhCCCEEEEeCCCCHH-HHHHHHhhHhhcCCEEecCC--CCHHHH
Confidence 55555554 44556 78999999999877 99999999999999878887 88877774 66666643 356899
Q ss_pred HHHHHHHhcCCC
Q psy10186 111 AWATSIVLNNPR 122 (124)
Q Consensus 111 ~~~l~~ll~~~~ 122 (124)
.+.+.++++|+.
T Consensus 355 ~~~l~~ll~d~~ 366 (396)
T TIGR03492 355 AQVVRQLLADPE 366 (396)
T ss_pred HHHHHHHHcCHH
Confidence 999999998764
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
>COG5017 Uncharacterized conserved protein [Function unknown]
Back Show alignment and domain information
Probab=98.87 E-value=5e-08 Score=61.07 Aligned_cols=84 Identities=21% Similarity=0.307 Sum_probs=64.6
Q ss_pred CeEEEEEcCCCCCCCCCcEEEeecc--ChHHhhcCCCcceEEecCChhhHHHHHHhCCCeeeeccc--------ccHHHH
Q psy10186 18 LTVLWRYEGDSIENLPGNVHIRKWI--PQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFY--------GDQLSH 87 (124)
Q Consensus 18 ~~~i~~~g~~~~~~~~~~v~~~~~~--~~~~~l~~~~~d~~i~~gG~~t~~ea~~~g~P~l~~P~~--------~~q~~~ 87 (124)
.++|+++|+.+.....+ .++.+|. +...-+. ..++++|+|+|.||++.++..++|.|++|+. .+|...
T Consensus 31 e~lIvQyGn~d~kpvag-l~v~~F~~~~kiQsli-~darIVISHaG~GSIL~~~rl~kplIv~pr~s~y~elvDdHQvel 108 (161)
T COG5017 31 EELIVQYGNGDIKPVAG-LRVYGFDKEEKIQSLI-HDARIVISHAGEGSILLLLRLDKPLIVVPRSSQYQELVDDHQVEL 108 (161)
T ss_pred hheeeeecCCCcccccc-cEEEeechHHHHHHHh-hcceEEEeccCcchHHHHhhcCCcEEEEECchhHHHhhhhHHHHH
Confidence 49999999976443222 4555553 4444444 4677999999999999999999999999985 368889
Q ss_pred HHHHHHcCceeEecCC
Q psy10186 88 VRHIVDLGAGVELSYF 103 (124)
Q Consensus 88 a~~~~~~g~g~~~~~~ 103 (124)
|..+.+.+.-....+.
T Consensus 109 a~klae~~~vv~~spt 124 (161)
T COG5017 109 ALKLAEINYVVACSPT 124 (161)
T ss_pred HHHHHhcCceEEEcCC
Confidence 9999999887777643
>TIGR00215 lpxB lipid-A-disaccharide synthase
Back Show alignment and domain information
Probab=98.83 E-value=1.1e-08 Score=75.00 Aligned_cols=75 Identities=19% Similarity=0.105 Sum_probs=65.0
Q ss_pred hHHhhcCCCcceEEecCChhhHHHHHHhCCCeeee----cccc---------cHHHHHHHHHHcCceeEecCCCCCHHHH
Q psy10186 44 QQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGV----PFYG---------DQLSHVRHIVDLGAGVELSYFNITLESI 110 (124)
Q Consensus 44 ~~~~l~~~~~d~~i~~gG~~t~~ea~~~g~P~l~~----P~~~---------~q~~~a~~~~~~g~g~~~~~~~~~~~~l 110 (124)
..+.+ ..+|++|+.+|..|+ |++++|+|+|++ |+.. .|..|+..+.+.++.-.+..++++.+.+
T Consensus 261 ~~~~l--~aADl~V~~SGt~tl-Ea~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~~~~~pel~q~~~~~~~l 337 (385)
T TIGR00215 261 ARKAM--FAADAALLASGTAAL-EAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILANRLLVPELLQEECTPHPL 337 (385)
T ss_pred HHHHH--HhCCEEeecCCHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcCCccchhhcCCCCCHHHH
Confidence 34456 789999999999877 999999999999 7642 2777999999999998877788999999
Q ss_pred HHHHHHHhcCC
Q psy10186 111 AWATSIVLNNP 121 (124)
Q Consensus 111 ~~~l~~ll~~~ 121 (124)
.+.+.++++|+
T Consensus 338 ~~~~~~ll~~~ 348 (385)
T TIGR00215 338 AIALLLLLENG 348 (385)
T ss_pred HHHHHHHhcCC
Confidence 99999999887
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases
Back Show alignment and domain information
Probab=98.69 E-value=1.2e-07 Score=67.16 Aligned_cols=100 Identities=19% Similarity=0.244 Sum_probs=71.9
Q ss_pred CCeEEEEEcCCC---CCCCCCcEEEeeccChHHhhcC-CCcceEEecCC----hhhHHHHHHhCCCeeeecccccHHHHH
Q psy10186 17 GLTVLWRYEGDS---IENLPGNVHIRKWIPQQDVLAH-PNCRLFISHGG----VNSALEAIHYGIPIIGVPFYGDQLSHV 88 (124)
Q Consensus 17 ~~~~i~~~g~~~---~~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~~gG----~~t~~ea~~~g~P~l~~P~~~~q~~~a 88 (124)
++++++..++.. ......++.+.+++++.++... ..+|+++.++. .++++||+++|+|+|+.+.. .+.
T Consensus 227 ~~~l~i~G~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~d~~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~----~~~ 302 (364)
T cd03814 227 PVRLVIVGDGPARARLEARYPNVHFLGFLDGEELAAAYASADVFVFPSRTETFGLVVLEAMASGLPVVAPDAG----GPA 302 (364)
T ss_pred CceEEEEeCCchHHHHhccCCcEEEEeccCHHHHHHHHHhCCEEEECcccccCCcHHHHHHHcCCCEEEcCCC----Cch
Confidence 456655544332 1234678999999887663222 88999998764 47899999999999997544 345
Q ss_pred HHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCC
Q psy10186 89 RHIVDLGAGVELSYFNITLESIAWATSIVLNNPR 122 (124)
Q Consensus 89 ~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~ 122 (124)
+.+++.+.|..+.+ .+.+++.+++.+++.+++
T Consensus 303 ~~i~~~~~g~~~~~--~~~~~l~~~i~~l~~~~~ 334 (364)
T cd03814 303 DIVTDGENGLLVEP--GDAEAFAAALAALLADPE 334 (364)
T ss_pred hhhcCCcceEEcCC--CCHHHHHHHHHHHHcCHH
Confidence 56666788888753 357889999999998765
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase
Back Show alignment and domain information
Probab=98.67 E-value=2.5e-07 Score=66.99 Aligned_cols=109 Identities=17% Similarity=0.204 Sum_probs=73.7
Q ss_pred HHHHHHHHhhC-----CCeEEEEEcCCC--------CCCCCCcEEEeeccChHHhhcC-CCcceEEecCChhhHHHHHHh
Q psy10186 6 RTLLVTAFSRT-----GLTVLWRYEGDS--------IENLPGNVHIRKWIPQQDVLAH-PNCRLFISHGGVNSALEAIHY 71 (124)
Q Consensus 6 ~~~~~~~l~~~-----~~~~i~~~g~~~--------~~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~~gG~~t~~ea~~~ 71 (124)
+..+++++..+ +.++++..+++. .....+++++.+.++..+.+.. ..+|++++.+|.. +.||+++
T Consensus 214 ~~~ll~a~~~l~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~ad~vv~~Sg~~-~~EA~a~ 292 (365)
T TIGR00236 214 LENIFKAIREIVEEFEDVQIVYPVHLNPVVREPLHKHLGDSKRVHLIEPLEYLDFLNLAANSHLILTDSGGV-QEEAPSL 292 (365)
T ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCChHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhCCEEEECChhH-HHHHHHc
Confidence 45566665443 467777655432 0123457888887776543322 7899999988764 7999999
Q ss_pred CCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCC
Q psy10186 72 GIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPR 122 (124)
Q Consensus 72 g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~ 122 (124)
|+|+|..+..+++.. +.+.|.+..+. .+.+++.+++.++++++.
T Consensus 293 g~PvI~~~~~~~~~e----~~~~g~~~lv~---~d~~~i~~ai~~ll~~~~ 336 (365)
T TIGR00236 293 GKPVLVLRDTTERPE----TVEAGTNKLVG---TDKENITKAAKRLLTDPD 336 (365)
T ss_pred CCCEEECCCCCCChH----HHhcCceEEeC---CCHHHHHHHHHHHHhChH
Confidence 999999876554432 23356666653 278999999999998765
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Back Show alignment and domain information
Probab=98.64 E-value=6.3e-07 Score=66.16 Aligned_cols=82 Identities=18% Similarity=0.317 Sum_probs=61.5
Q ss_pred cEEEeeccCh-HHhhcCCCcceEEec-----CChhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHH
Q psy10186 35 NVHIRKWIPQ-QDVLAHPNCRLFISH-----GGVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLE 108 (124)
Q Consensus 35 ~v~~~~~~~~-~~~l~~~~~d~~i~~-----gG~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~ 108 (124)
++.+.+.... ..++ ..+|+++.. +|..+++||+++|+|+|..|...++....+.+.+.|.++... +.+
T Consensus 303 ~v~l~~~~~el~~~y--~~aDi~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~g~~~~~~----d~~ 376 (425)
T PRK05749 303 DVLLGDTMGELGLLY--AIADIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQAGAAIQVE----DAE 376 (425)
T ss_pred cEEEEecHHHHHHHH--HhCCEEEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHCCCeEEEC----CHH
Confidence 3455444333 3344 789995442 455679999999999999998888888888777778777655 789
Q ss_pred HHHHHHHHHhcCCC
Q psy10186 109 SIAWATSIVLNNPR 122 (124)
Q Consensus 109 ~l~~~l~~ll~~~~ 122 (124)
++.+++.++++|+.
T Consensus 377 ~La~~l~~ll~~~~ 390 (425)
T PRK05749 377 DLAKAVTYLLTDPD 390 (425)
T ss_pred HHHHHHHHHhcCHH
Confidence 99999999998764
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases
Back Show alignment and domain information
Probab=98.63 E-value=3.3e-07 Score=64.71 Aligned_cols=100 Identities=16% Similarity=0.143 Sum_probs=70.4
Q ss_pred CCeEEEEEcCCCCC------CCCCcEEEeeccChHHhhcC-CCcceEEecC-----ChhhHHHHHHhCCCeeeecccccH
Q psy10186 17 GLTVLWRYEGDSIE------NLPGNVHIRKWIPQQDVLAH-PNCRLFISHG-----GVNSALEAIHYGIPIIGVPFYGDQ 84 (124)
Q Consensus 17 ~~~~i~~~g~~~~~------~~~~~v~~~~~~~~~~~l~~-~~~d~~i~~g-----G~~t~~ea~~~g~P~l~~P~~~~q 84 (124)
++++++..+..... ....++.+.++++..++... ..+|++++.+ ...+++||+++|+|+|..+ .
T Consensus 220 ~~~l~i~G~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~----~ 295 (359)
T cd03823 220 DIELVIVGNGLELEEESYELEGDPRVEFLGAYPQEEIDDFYAEIDVLVVPSIWPENFPLVIREALAAGVPVIASD----I 295 (359)
T ss_pred CcEEEEEcCchhhhHHHHhhcCCCeEEEeCCCCHHHHHHHHHhCCEEEEcCcccCCCChHHHHHHHCCCCEEECC----C
Confidence 56776554443211 13478999999976554222 7899988543 3457999999999999964 3
Q ss_pred HHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCC
Q psy10186 85 LSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPR 122 (124)
Q Consensus 85 ~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~ 122 (124)
....+.+.+.+.|..+.++ +.+++.+++.++++++.
T Consensus 296 ~~~~e~i~~~~~g~~~~~~--d~~~l~~~i~~l~~~~~ 331 (359)
T cd03823 296 GGMAELVRDGVNGLLFPPG--DAEDLAAALERLIDDPD 331 (359)
T ss_pred CCHHHHhcCCCcEEEECCC--CHHHHHHHHHHHHhChH
Confidence 3456666766788888643 48999999999998764
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Back Show alignment and domain information
Probab=98.60 E-value=2.7e-07 Score=66.97 Aligned_cols=77 Identities=14% Similarity=0.046 Sum_probs=54.2
Q ss_pred hHHhhcCCCcceEEecCChhhHHHHHHhCCCeeeecccccHH-HH------------HHHHHHcCceeEecCCCCCHHHH
Q psy10186 44 QQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQL-SH------------VRHIVDLGAGVELSYFNITLESI 110 (124)
Q Consensus 44 ~~~~l~~~~~d~~i~~gG~~t~~ea~~~g~P~l~~P~~~~q~-~~------------a~~~~~~g~g~~~~~~~~~~~~l 110 (124)
...++ ..+|++|+.+|.+++ |++++|+|+|++|...... .. ++.+.+.+++..+..+..+.+++
T Consensus 255 ~~~~~--~~aDl~v~~sG~~~l-Ea~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l 331 (380)
T PRK00025 255 KREAM--AAADAALAASGTVTL-ELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAGRELVPELLQEEATPEKL 331 (380)
T ss_pred HHHHH--HhCCEEEECccHHHH-HHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHhcCCCcchhhcCCCCCHHHH
Confidence 34555 789999999998776 9999999999996543221 11 23333333343344456689999
Q ss_pred HHHHHHHhcCCCC
Q psy10186 111 AWATSIVLNNPRR 123 (124)
Q Consensus 111 ~~~l~~ll~~~~~ 123 (124)
.+.+.++++|++.
T Consensus 332 ~~~i~~ll~~~~~ 344 (380)
T PRK00025 332 ARALLPLLADGAR 344 (380)
T ss_pred HHHHHHHhcCHHH
Confidence 9999999998754
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases
Back Show alignment and domain information
Probab=98.57 E-value=6.2e-07 Score=63.74 Aligned_cols=112 Identities=18% Similarity=0.152 Sum_probs=75.9
Q ss_pred HHHHHHHHHhhCC-CeEEEEEcCCC---------CCCCCCcEEEeeccChHHhhcC-CCcceEEecC-----C-hhhHHH
Q psy10186 5 MRTLLVTAFSRTG-LTVLWRYEGDS---------IENLPGNVHIRKWIPQQDVLAH-PNCRLFISHG-----G-VNSALE 67 (124)
Q Consensus 5 ~~~~~~~~l~~~~-~~~i~~~g~~~---------~~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~~g-----G-~~t~~e 67 (124)
-+..+++++.+.. +++++...+.. ......|+.+.+++++.++... ..||+++... | ..+++|
T Consensus 205 ~~~~li~a~~~l~~~~l~i~G~g~~~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~~~ad~~i~ps~~~~e~~g~~~~E 284 (357)
T cd03795 205 GLDVLLEAAAALPDAPLVIVGEGPLEAELEALAAALGLLDRVRFLGRLDDEEKAALLAACDVFVFPSVERSEAFGIVLLE 284 (357)
T ss_pred CHHHHHHHHHhccCcEEEEEeCChhHHHHHHHHHhcCCcceEEEcCCCCHHHHHHHHHhCCEEEeCCcccccccchHHHH
Confidence 3455667776665 67766554432 1234578999999997553222 7899988432 2 457999
Q ss_pred HHHhCCCeeeecccccHHHHHHHHHH-cCceeEecCCCCCHHHHHHHHHHHhcCCC
Q psy10186 68 AIHYGIPIIGVPFYGDQLSHVRHIVD-LGAGVELSYFNITLESIAWATSIVLNNPR 122 (124)
Q Consensus 68 a~~~g~P~l~~P~~~~q~~~a~~~~~-~g~g~~~~~~~~~~~~l~~~l~~ll~~~~ 122 (124)
|+++|+|+|....... ...+.. .+.|..+.. .+.+++.+++.+++++++
T Consensus 285 a~~~g~Pvi~~~~~~~----~~~i~~~~~~g~~~~~--~d~~~~~~~i~~l~~~~~ 334 (357)
T cd03795 285 AMAFGKPVISTEIGTG----GSYVNLHGVTGLVVPP--GDPAALAEAIRRLLEDPE 334 (357)
T ss_pred HHHcCCCEEecCCCCc----hhHHhhCCCceEEeCC--CCHHHHHHHHHHHHHCHH
Confidence 9999999999643333 333443 577877753 368999999999998874
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases
Back Show alignment and domain information
Probab=98.56 E-value=3.8e-07 Score=65.88 Aligned_cols=84 Identities=21% Similarity=0.250 Sum_probs=64.5
Q ss_pred CCcEEEeeccChHHhhcC-CCcceEEecCC----hhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecCCCCCH
Q psy10186 33 PGNVHIRKWIPQQDVLAH-PNCRLFISHGG----VNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITL 107 (124)
Q Consensus 33 ~~~v~~~~~~~~~~~l~~-~~~d~~i~~gG----~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~ 107 (124)
..++.+.++++..++... ..+|++++.+- ..+++||+++|+|+|+-+ .....+.+++.+.|..+.+. +.
T Consensus 282 ~~~v~~~g~~~~~~~~~~~~~adi~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~----~~~~~e~i~~~~~g~~~~~~--~~ 355 (398)
T cd03800 282 IDRVDFPGRVSREDLPALYRAADVFVNPALYEPFGLTALEAMACGLPVVATA----VGGPRDIVVDGVTGLLVDPR--DP 355 (398)
T ss_pred CceEEEeccCCHHHHHHHHHhCCEEEecccccccCcHHHHHHhcCCCEEECC----CCCHHHHccCCCCeEEeCCC--CH
Confidence 468999999998764322 78999987642 468999999999999864 33456667777889888633 58
Q ss_pred HHHHHHHHHHhcCCC
Q psy10186 108 ESIAWATSIVLNNPR 122 (124)
Q Consensus 108 ~~l~~~l~~ll~~~~ 122 (124)
+++.+++.++++++.
T Consensus 356 ~~l~~~i~~l~~~~~ 370 (398)
T cd03800 356 EALAAALRRLLTDPA 370 (398)
T ss_pred HHHHHHHHHHHhCHH
Confidence 999999999987764
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases
Back Show alignment and domain information
Probab=98.55 E-value=2.5e-07 Score=66.29 Aligned_cols=111 Identities=20% Similarity=0.227 Sum_probs=79.0
Q ss_pred HHHHHHHHHhhCCCeEEEEEcCCCC----CCCCCcEEEeeccChHHhhcC-CCcceEEecC--C-hhhHHHHHHhCCCee
Q psy10186 5 MRTLLVTAFSRTGLTVLWRYEGDSI----ENLPGNVHIRKWIPQQDVLAH-PNCRLFISHG--G-VNSALEAIHYGIPII 76 (124)
Q Consensus 5 ~~~~~~~~l~~~~~~~i~~~g~~~~----~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~~g--G-~~t~~ea~~~g~P~l 76 (124)
-+..+++++...+.+++++.++... ....+|+.+.++++..++... ..+|+++... | ..+++||+++|+|+|
T Consensus 209 ~~~~li~a~~~~~~~l~ivG~g~~~~~l~~~~~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~e~~g~~~~Eama~G~Pvi 288 (351)
T cd03804 209 RIDLAIEAFNKLGKRLVVIGDGPELDRLRAKAGPNVTFLGRVSDEELRDLYARARAFLFPAEEDFGIVPVEAMASGTPVI 288 (351)
T ss_pred ChHHHHHHHHHCCCcEEEEECChhHHHHHhhcCCCEEEecCCCHHHHHHHHHhCCEEEECCcCCCCchHHHHHHcCCCEE
Confidence 3556778888888777666544321 135679999999998654322 7899988653 2 356889999999999
Q ss_pred eecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCC
Q psy10186 77 GVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNP 121 (124)
Q Consensus 77 ~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~ 121 (124)
..... ...+.+.+...|..+.++ +.+++.+++.++++++
T Consensus 289 ~~~~~----~~~e~i~~~~~G~~~~~~--~~~~la~~i~~l~~~~ 327 (351)
T cd03804 289 AYGKG----GALETVIDGVTGILFEEQ--TVESLAAAVERFEKNE 327 (351)
T ss_pred EeCCC----CCcceeeCCCCEEEeCCC--CHHHHHHHHHHHHhCc
Confidence 97432 234455666788888533 5888999999999887
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc)
Back Show alignment and domain information
Probab=98.55 E-value=7.9e-07 Score=64.00 Aligned_cols=111 Identities=18% Similarity=0.202 Sum_probs=72.8
Q ss_pred HHHHHHHHHHHhhCC---CeEEEEEcCC---CC----CCC---CCcEEEeeccChHH---hhcCCCcceEEecCChhhHH
Q psy10186 3 DGMRTLLVTAFSRTG---LTVLWRYEGD---SI----ENL---PGNVHIRKWIPQQD---VLAHPNCRLFISHGGVNSAL 66 (124)
Q Consensus 3 ~~~~~~~~~~l~~~~---~~~i~~~g~~---~~----~~~---~~~v~~~~~~~~~~---~l~~~~~d~~i~~gG~~t~~ 66 (124)
.+.+..+++++.... ..+++...+. .. .+. .+++.+.++.+..+ ++ ..||++|+.+| +.+.
T Consensus 214 ~k~~~~l~~al~~l~~~~~~vi~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~l~--~~ad~~v~~Sg-gi~~ 290 (363)
T cd03786 214 GEQLEEILEALAELAEEDVPVVFPNHPRTRPRIREAGLEFLGHHPNVLLISPLGYLYFLLLL--KNADLVLTDSG-GIQE 290 (363)
T ss_pred hHHHHHHHHHHHHHHhcCCEEEEECCCChHHHHHHHHHhhccCCCCEEEECCcCHHHHHHHH--HcCcEEEEcCc-cHHh
Confidence 455677777776653 3343322221 11 111 46788877655433 34 78999999999 6788
Q ss_pred HHHHhCCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCCC
Q psy10186 67 EAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPRR 123 (124)
Q Consensus 67 ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~~ 123 (124)
|++++|+|+|.++...+ +..+.+.|.+..+.. +.+++.+++.++++++..
T Consensus 291 Ea~~~g~PvI~~~~~~~----~~~~~~~g~~~~~~~---~~~~i~~~i~~ll~~~~~ 340 (363)
T cd03786 291 EASFLGVPVLNLRDRTE----RPETVESGTNVLVGT---DPEAILAAIEKLLSDEFA 340 (363)
T ss_pred hhhhcCCCEEeeCCCCc----cchhhheeeEEecCC---CHHHHHHHHHHHhcCchh
Confidence 99999999999863322 334555677766641 489999999999987643
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Back Show alignment and domain information
Probab=98.49 E-value=3.2e-06 Score=61.08 Aligned_cols=114 Identities=18% Similarity=0.154 Sum_probs=75.9
Q ss_pred HHHHHHHHhhC--CCeEEEEEcCCC---------CCCCCCcEEEeeccCh--HHhhc-CCCcceEEecCC----hhhHHH
Q psy10186 6 RTLLVTAFSRT--GLTVLWRYEGDS---------IENLPGNVHIRKWIPQ--QDVLA-HPNCRLFISHGG----VNSALE 67 (124)
Q Consensus 6 ~~~~~~~l~~~--~~~~i~~~g~~~---------~~~~~~~v~~~~~~~~--~~~l~-~~~~d~~i~~gG----~~t~~e 67 (124)
+..+++++... +.+++++.++.. ..+.++++.+.++.+. ..+.. +..+|+++..+- ..+++|
T Consensus 197 ~~~l~~a~~~~~~~~~l~ivG~g~~~~~l~~~~~~~~l~~~v~f~G~~~~~~~~~~~~~~~~d~~v~~s~~Egf~~~~lE 276 (359)
T PRK09922 197 VKELFDGLSQTTGEWQLHIIGDGSDFEKCKAYSRELGIEQRIIWHGWQSQPWEVVQQKIKNVSALLLTSKFEGFPMTLLE 276 (359)
T ss_pred HHHHHHHHHhhCCCeEEEEEeCCccHHHHHHHHHHcCCCCeEEEecccCCcHHHHHHHHhcCcEEEECCcccCcChHHHH
Confidence 44566666554 456665543332 1124678999998753 22211 157899887643 579999
Q ss_pred HHHhCCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCCCC
Q psy10186 68 AIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPRRY 124 (124)
Q Consensus 68 a~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~~r 124 (124)
|+++|+|+|..-. .....+.+++...|..+.+ .+.+++.+++.+++++++.|
T Consensus 277 Ama~G~Pvv~s~~---~~g~~eiv~~~~~G~lv~~--~d~~~la~~i~~l~~~~~~~ 328 (359)
T PRK09922 277 AMSYGIPCISSDC---MSGPRDIIKPGLNGELYTP--GNIDEFVGKLNKVISGEVKY 328 (359)
T ss_pred HHHcCCCEEEeCC---CCChHHHccCCCceEEECC--CCHHHHHHHHHHHHhCcccC
Confidence 9999999998631 2233355666667888753 37999999999999998753
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Back Show alignment and domain information
Probab=98.48 E-value=5.3e-07 Score=67.41 Aligned_cols=113 Identities=13% Similarity=0.120 Sum_probs=76.9
Q ss_pred HHHHHHHHHHhhC-CCeEEEEEcCCCC---CC--CCCcEEEeeccChHHhhcC-CCcceEEecCC----hhhHHHHHHhC
Q psy10186 4 GMRTLLVTAFSRT-GLTVLWRYEGDSI---EN--LPGNVHIRKWIPQQDVLAH-PNCRLFISHGG----VNSALEAIHYG 72 (124)
Q Consensus 4 ~~~~~~~~~l~~~-~~~~i~~~g~~~~---~~--~~~~v~~~~~~~~~~~l~~-~~~d~~i~~gG----~~t~~ea~~~g 72 (124)
+.+..+++++... +.+++++.++... .+ ...++.+.++++..++... ..+|++|.... ..+++||+++|
T Consensus 276 K~~~~li~a~~~~~~~~l~ivG~G~~~~~l~~~~~~~~V~f~G~v~~~ev~~~~~~aDv~V~pS~~E~~g~~vlEAmA~G 355 (465)
T PLN02871 276 KNLDFLKRVMERLPGARLAFVGDGPYREELEKMFAGTPTVFTGMLQGDELSQAYASGDVFVMPSESETLGFVVLEAMASG 355 (465)
T ss_pred hhHHHHHHHHHhCCCcEEEEEeCChHHHHHHHHhccCCeEEeccCCHHHHHHHHHHCCEEEECCcccccCcHHHHHHHcC
Confidence 3455666777665 4676655433221 11 2347899999986653332 88999997764 35789999999
Q ss_pred CCeeeecccccHHHHHHHHHH---cCceeEecCCCCCHHHHHHHHHHHhcCCC
Q psy10186 73 IPIIGVPFYGDQLSHVRHIVD---LGAGVELSYFNITLESIAWATSIVLNNPR 122 (124)
Q Consensus 73 ~P~l~~P~~~~q~~~a~~~~~---~g~g~~~~~~~~~~~~l~~~l~~ll~~~~ 122 (124)
+|+|+.... ...+.+.+ .+.|..+.++ +.+++.+++.++++++.
T Consensus 356 ~PVI~s~~g----g~~eiv~~~~~~~~G~lv~~~--d~~~la~~i~~ll~~~~ 402 (465)
T PLN02871 356 VPVVAARAG----GIPDIIPPDQEGKTGFLYTPG--DVDDCVEKLETLLADPE 402 (465)
T ss_pred CCEEEcCCC----CcHhhhhcCCCCCceEEeCCC--CHHHHHHHHHHHHhCHH
Confidence 999986432 23445555 6788888643 58899999999998765
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases
Back Show alignment and domain information
Probab=98.48 E-value=3.1e-07 Score=59.47 Aligned_cols=83 Identities=28% Similarity=0.356 Sum_probs=64.4
Q ss_pred CCCcEEEeeccChHH---hhcCCCcceEEec----CChhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecCCC
Q psy10186 32 LPGNVHIRKWIPQQD---VLAHPNCRLFISH----GGVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFN 104 (124)
Q Consensus 32 ~~~~v~~~~~~~~~~---~l~~~~~d~~i~~----gG~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~ 104 (124)
...++.+.++.+..+ ++ ..+|++++. +...+++||+++|+|+|+- +...+.+.+.+...|..+...
T Consensus 71 ~~~~i~~~~~~~~~~l~~~~--~~~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~----~~~~~~e~~~~~~~g~~~~~~- 143 (172)
T PF00534_consen 71 LKENIIFLGYVPDDELDELY--KSSDIFVSPSRNEGFGLSLLEAMACGCPVIAS----DIGGNNEIINDGVNGFLFDPN- 143 (172)
T ss_dssp CGTTEEEEESHSHHHHHHHH--HHTSEEEE-BSSBSS-HHHHHHHHTT-EEEEE----SSTHHHHHSGTTTSEEEESTT-
T ss_pred cccccccccccccccccccc--ccceeccccccccccccccccccccccceeec----cccCCceeeccccceEEeCCC-
Confidence 567899999998433 44 679999988 4567999999999999984 566667777777889998743
Q ss_pred CCHHHHHHHHHHHhcCCC
Q psy10186 105 ITLESIAWATSIVLNNPR 122 (124)
Q Consensus 105 ~~~~~l~~~l~~ll~~~~ 122 (124)
+.+++.+++.++++++.
T Consensus 144 -~~~~l~~~i~~~l~~~~ 160 (172)
T PF00534_consen 144 -DIEELADAIEKLLNDPE 160 (172)
T ss_dssp -SHHHHHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHCCHH
Confidence 79999999999987753
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases
Back Show alignment and domain information
Probab=98.48 E-value=8.2e-07 Score=62.84 Aligned_cols=99 Identities=18% Similarity=0.232 Sum_probs=70.7
Q ss_pred CCeEEEEEcCCCC---------CCCCCcEEEeeccChHHhhcC-CCcceEEecCC----hhhHHHHHHhCCCeeeecccc
Q psy10186 17 GLTVLWRYEGDSI---------ENLPGNVHIRKWIPQQDVLAH-PNCRLFISHGG----VNSALEAIHYGIPIIGVPFYG 82 (124)
Q Consensus 17 ~~~~i~~~g~~~~---------~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~~gG----~~t~~ea~~~g~P~l~~P~~~ 82 (124)
++++++..++... ....+++.+.+++++.++... ..+|+++..+. ..+++||+++|+|+|+..
T Consensus 233 ~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~g~PvI~~~--- 309 (374)
T cd03817 233 DVKLVIVGDGPEREELEELARELGLADRVIFTGFVPREELPDYYKAADLFVFASTTETQGLVLLEAMAAGLPVVAVD--- 309 (374)
T ss_pred CeEEEEEeCCchHHHHHHHHHHcCCCCcEEEeccCChHHHHHHHHHcCEEEecccccCcChHHHHHHHcCCcEEEeC---
Confidence 4677666543321 134678999999987663222 78999986653 478999999999999963
Q ss_pred cHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCC
Q psy10186 83 DQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPR 122 (124)
Q Consensus 83 ~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~ 122 (124)
....++.+.+.+.|..+..++. ++.+++.++++++.
T Consensus 310 -~~~~~~~i~~~~~g~~~~~~~~---~~~~~i~~l~~~~~ 345 (374)
T cd03817 310 -APGLPDLVADGENGFLFPPGDE---ALAEALLRLLQDPE 345 (374)
T ss_pred -CCChhhheecCceeEEeCCCCH---HHHHHHHHHHhChH
Confidence 3445666777788888874332 89999999998875
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Back Show alignment and domain information
Probab=98.47 E-value=5.2e-07 Score=66.53 Aligned_cols=85 Identities=16% Similarity=0.229 Sum_probs=64.2
Q ss_pred CCCcEEEeeccChHHhhcC-CCcceEEecC---------C-hhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEe
Q psy10186 32 LPGNVHIRKWIPQQDVLAH-PNCRLFISHG---------G-VNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVEL 100 (124)
Q Consensus 32 ~~~~v~~~~~~~~~~~l~~-~~~d~~i~~g---------G-~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~ 100 (124)
..+++.+.+|+++.++... ..+|+++..+ | ..+++||+++|+|+|.-. .....+.+++...|..+
T Consensus 277 l~~~V~~~G~~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~----~~g~~E~v~~~~~G~lv 352 (406)
T PRK15427 277 LEDVVEMPGFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTL----HSGIPELVEADKSGWLV 352 (406)
T ss_pred CCCeEEEeCCCCHHHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeC----CCCchhhhcCCCceEEe
Confidence 4578999999998764333 8899988653 3 257899999999999963 33445566666788888
Q ss_pred cCCCCCHHHHHHHHHHHhc-CCC
Q psy10186 101 SYFNITLESIAWATSIVLN-NPR 122 (124)
Q Consensus 101 ~~~~~~~~~l~~~l~~ll~-~~~ 122 (124)
.+. +.+++.++|.++++ |++
T Consensus 353 ~~~--d~~~la~ai~~l~~~d~~ 373 (406)
T PRK15427 353 PEN--DAQALAQRLAAFSQLDTD 373 (406)
T ss_pred CCC--CHHHHHHHHHHHHhCCHH
Confidence 643 68999999999998 764
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds
Back Show alignment and domain information
Probab=98.46 E-value=1.8e-06 Score=61.84 Aligned_cols=85 Identities=21% Similarity=0.246 Sum_probs=64.7
Q ss_pred CCCcEEEeeccChHHhhcC-CCcceEEecC----------ChhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEe
Q psy10186 32 LPGNVHIRKWIPQQDVLAH-PNCRLFISHG----------GVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVEL 100 (124)
Q Consensus 32 ~~~~v~~~~~~~~~~~l~~-~~~d~~i~~g----------G~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~ 100 (124)
...++.+.++++..++... ..+|+++..+ -.++++||+++|+|+|.-+.. .+.+.+.+.+.|..+
T Consensus 243 ~~~~v~~~g~~~~~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~----~~~e~i~~~~~g~~~ 318 (367)
T cd05844 243 LGGRVTFLGAQPHAEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHG----GIPEAVEDGETGLLV 318 (367)
T ss_pred CCCeEEECCCCCHHHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCC----CchhheecCCeeEEE
Confidence 4678999999987654322 7899988644 257899999999999986543 356666777888888
Q ss_pred cCCCCCHHHHHHHHHHHhcCCC
Q psy10186 101 SYFNITLESIAWATSIVLNNPR 122 (124)
Q Consensus 101 ~~~~~~~~~l~~~l~~ll~~~~ 122 (124)
.+ .+.+++.+++.++++++.
T Consensus 319 ~~--~d~~~l~~~i~~l~~~~~ 338 (367)
T cd05844 319 PE--GDVAALAAALGRLLADPD 338 (367)
T ss_pred CC--CCHHHHHHHHHHHHcCHH
Confidence 63 357899999999998764
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known
Back Show alignment and domain information
Probab=98.44 E-value=1.4e-06 Score=61.12 Aligned_cols=85 Identities=22% Similarity=0.271 Sum_probs=64.3
Q ss_pred CCCcEEEeeccChHHhhcC-CCcceEEec----CChhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecCCCCC
Q psy10186 32 LPGNVHIRKWIPQQDVLAH-PNCRLFISH----GGVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNIT 106 (124)
Q Consensus 32 ~~~~v~~~~~~~~~~~l~~-~~~d~~i~~----gG~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~ 106 (124)
.+.++.+.++++..++... ..+|++|+. |..++++||+++|+|+|+.+. ....+.+.+.+.|..+... +
T Consensus 254 ~~~~v~~~g~~~~~~~~~~~~~~di~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~----~~~~~~~~~~~~g~~~~~~--~ 327 (374)
T cd03801 254 LGDRVTFLGFVPDEDLPALYAAADVFVLPSLYEGFGLVLLEAMAAGLPVVASDV----GGIPEVVEDGETGLLVPPG--D 327 (374)
T ss_pred CCcceEEEeccChhhHHHHHHhcCEEEecchhccccchHHHHHHcCCcEEEeCC----CChhHHhcCCcceEEeCCC--C
Confidence 5678999999975553222 789999864 346789999999999999643 4456666667788888632 4
Q ss_pred HHHHHHHHHHHhcCCC
Q psy10186 107 LESIAWATSIVLNNPR 122 (124)
Q Consensus 107 ~~~l~~~l~~ll~~~~ 122 (124)
.+++.+++.+++++++
T Consensus 328 ~~~l~~~i~~~~~~~~ 343 (374)
T cd03801 328 PEALAEAILRLLDDPE 343 (374)
T ss_pred HHHHHHHHHHHHcChH
Confidence 8999999999988765
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Back Show alignment and domain information
Probab=98.43 E-value=4e-06 Score=61.27 Aligned_cols=86 Identities=17% Similarity=0.194 Sum_probs=62.6
Q ss_pred CCCcEEEeeccChHHhhcC-CCcceEEecCC-----hhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecCCCC
Q psy10186 32 LPGNVHIRKWIPQQDVLAH-PNCRLFISHGG-----VNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNI 105 (124)
Q Consensus 32 ~~~~v~~~~~~~~~~~l~~-~~~d~~i~~gG-----~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~ 105 (124)
...++.+.++++..++... ..+|+++..+. ..+++||+++|+|+|+... ....+.+++...|..+.+ ..
T Consensus 255 l~~~v~~~G~~~~~~l~~~~~~aDv~v~pS~~~E~f~~~~lEAma~G~PVI~s~~----gg~~Eiv~~~~~G~~l~~-~~ 329 (380)
T PRK15484 255 IGDRCIMLGGQPPEKMHNYYPLADLVVVPSQVEEAFCMVAVEAMAAGKPVLASTK----GGITEFVLEGITGYHLAE-PM 329 (380)
T ss_pred cCCcEEEeCCCCHHHHHHHHHhCCEEEeCCCCccccccHHHHHHHcCCCEEEeCC----CCcHhhcccCCceEEEeC-CC
Confidence 3467889999986554222 88999987553 2678999999999999643 345566666667875431 23
Q ss_pred CHHHHHHHHHHHhcCCC
Q psy10186 106 TLESIAWATSIVLNNPR 122 (124)
Q Consensus 106 ~~~~l~~~l~~ll~~~~ 122 (124)
+.+++.+++.++++|+.
T Consensus 330 d~~~la~~I~~ll~d~~ 346 (380)
T PRK15484 330 TSDSIISDINRTLADPE 346 (380)
T ss_pred CHHHHHHHHHHHHcCHH
Confidence 68999999999998864
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases
Back Show alignment and domain information
Probab=98.42 E-value=1.9e-06 Score=61.07 Aligned_cols=85 Identities=16% Similarity=0.159 Sum_probs=61.4
Q ss_pred CCCcEEEeeccChHHhhcC-CCcceEEecCCh---------hhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEec
Q psy10186 32 LPGNVHIRKWIPQQDVLAH-PNCRLFISHGGV---------NSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELS 101 (124)
Q Consensus 32 ~~~~v~~~~~~~~~~~l~~-~~~d~~i~~gG~---------~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~ 101 (124)
..+++.+.++++..++... ..+|++|..... ++++||+++|+|+|+.+....+ ..+.+.+.|..+.
T Consensus 273 ~~~~v~~~g~~~~~~~~~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~----~~~~~~~~g~~~~ 348 (394)
T cd03794 273 GLDNVTFLGRVPKEELPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESA----ELVEEAGAGLVVP 348 (394)
T ss_pred CCCcEEEeCCCChHHHHHHHHhhCeeEEeccCcccccccCchHHHHHHHCCCcEEEecCCCch----hhhccCCcceEeC
Confidence 3568999999986664322 789998865432 3479999999999997655433 3333446777775
Q ss_pred CCCCCHHHHHHHHHHHhcCCC
Q psy10186 102 YFNITLESIAWATSIVLNNPR 122 (124)
Q Consensus 102 ~~~~~~~~l~~~l~~ll~~~~ 122 (124)
.+ +.+++.+++.+++.++.
T Consensus 349 ~~--~~~~l~~~i~~~~~~~~ 367 (394)
T cd03794 349 PG--DPEALAAAILELLDDPE 367 (394)
T ss_pred CC--CHHHHHHHHHHHHhChH
Confidence 33 68999999999997764
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases
Back Show alignment and domain information
Probab=98.41 E-value=1.8e-06 Score=61.03 Aligned_cols=83 Identities=20% Similarity=0.240 Sum_probs=61.0
Q ss_pred CCCcEEEeeccChHHhhcC-CCcceEEecCC----hhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecCCCCC
Q psy10186 32 LPGNVHIRKWIPQQDVLAH-PNCRLFISHGG----VNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNIT 106 (124)
Q Consensus 32 ~~~~v~~~~~~~~~~~l~~-~~~d~~i~~gG----~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~ 106 (124)
..+++.+.++++..++... ..+|+++...- ..+++||+++|+|+|+.+. ....+.+.+ +.|..... +
T Consensus 260 ~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~~~~~~-~~~~~~~~---~ 331 (375)
T cd03821 260 LEDRVTFTGMLYGEDKAAALADADLFVLPSHSENFGIVVAEALACGTPVVTTDK----VPWQELIEY-GCGWVVDD---D 331 (375)
T ss_pred ccceEEEcCCCChHHHHHHHhhCCEEEeccccCCCCcHHHHHHhcCCCEEEcCC----CCHHHHhhc-CceEEeCC---C
Confidence 4578999999996554221 78999887653 5789999999999999643 334444555 77777753 3
Q ss_pred HHHHHHHHHHHhcCCC
Q psy10186 107 LESIAWATSIVLNNPR 122 (124)
Q Consensus 107 ~~~l~~~l~~ll~~~~ 122 (124)
.+++.+++.+++++++
T Consensus 332 ~~~~~~~i~~l~~~~~ 347 (375)
T cd03821 332 VDALAAALRRALELPQ 347 (375)
T ss_pred hHHHHHHHHHHHhCHH
Confidence 4899999999988753
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases
Back Show alignment and domain information
Probab=98.40 E-value=2.4e-06 Score=62.95 Aligned_cols=85 Identities=20% Similarity=0.274 Sum_probs=63.3
Q ss_pred CCcEEEeeccChHHhh---cCCCcceEEecCC----hhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecCCCC
Q psy10186 33 PGNVHIRKWIPQQDVL---AHPNCRLFISHGG----VNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNI 105 (124)
Q Consensus 33 ~~~v~~~~~~~~~~~l---~~~~~d~~i~~gG----~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~ 105 (124)
..++.+.++++..++. ....+|+++..+- ..+++||+++|+|+|.- +.....+.+.+.+.|..+.+ ..
T Consensus 288 ~~~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas----~vgg~~e~i~~~~~G~l~~~-~~ 362 (407)
T cd04946 288 NISVNFTGELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIAT----NVGGTPEIVDNGGNGLLLSK-DP 362 (407)
T ss_pred CceEEEecCCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeC----CCCCcHHHhcCCCcEEEeCC-CC
Confidence 4578999999976533 2245788876663 46899999999999984 34445666766668888763 33
Q ss_pred CHHHHHHHHHHHhcCCC
Q psy10186 106 TLESIAWATSIVLNNPR 122 (124)
Q Consensus 106 ~~~~l~~~l~~ll~~~~ 122 (124)
+.+++.++|.++++|+.
T Consensus 363 ~~~~la~~I~~ll~~~~ 379 (407)
T cd04946 363 TPNELVSSLSKFIDNEE 379 (407)
T ss_pred CHHHHHHHHHHHHhCHH
Confidence 68999999999998764
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases
Back Show alignment and domain information
Probab=98.35 E-value=6.5e-06 Score=57.92 Aligned_cols=85 Identities=24% Similarity=0.248 Sum_probs=63.5
Q ss_pred CCCcEEEeeccChHHhhcC-CCcceEEec----CChhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecCCCCC
Q psy10186 32 LPGNVHIRKWIPQQDVLAH-PNCRLFISH----GGVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNIT 106 (124)
Q Consensus 32 ~~~~v~~~~~~~~~~~l~~-~~~d~~i~~----gG~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~ 106 (124)
..+++.+.++++..++... ..||+++.. |..++++||+++|+|+|+-+. ....+.+.+.+.|..+.+ .+
T Consensus 257 ~~~~v~~~g~~~~~~~~~~~~~ad~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~----~~~~~~~~~~~~g~~~~~--~~ 330 (377)
T cd03798 257 LEDRVTFLGAVPHEEVPAYYAAADVFVLPSLREGFGLVLLEAMACGLPVVATDV----GGIPEIITDGENGLLVPP--GD 330 (377)
T ss_pred CcceEEEeCCCCHHHHHHHHHhcCeeecchhhccCChHHHHHHhcCCCEEEecC----CChHHHhcCCcceeEECC--CC
Confidence 4578999999987653322 789998855 346789999999999998643 334556666677777753 36
Q ss_pred HHHHHHHHHHHhcCCC
Q psy10186 107 LESIAWATSIVLNNPR 122 (124)
Q Consensus 107 ~~~l~~~l~~ll~~~~ 122 (124)
.+++.+++.++++++.
T Consensus 331 ~~~l~~~i~~~~~~~~ 346 (377)
T cd03798 331 PEALAEAILRLLADPW 346 (377)
T ss_pred HHHHHHHHHHHhcCcH
Confidence 8899999999998764
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases
Back Show alignment and domain information
Probab=98.34 E-value=4.2e-06 Score=58.68 Aligned_cols=82 Identities=20% Similarity=0.259 Sum_probs=60.6
Q ss_pred CCcEEEeeccCh-HHhhcCCCcceEEecCC----hhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecCCCCCH
Q psy10186 33 PGNVHIRKWIPQ-QDVLAHPNCRLFISHGG----VNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITL 107 (124)
Q Consensus 33 ~~~v~~~~~~~~-~~~l~~~~~d~~i~~gG----~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~ 107 (124)
..++.+.++... .+++ ..+|+++..+. .++++||+++|+|+|.-+.. ...+.+.+.+.|..+.. -+.
T Consensus 245 ~~~v~~~g~~~~~~~~~--~~adi~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~----~~~~~i~~~~~g~~~~~--~~~ 316 (359)
T cd03808 245 EGRVEFLGFRDDVPELL--AAADVFVLPSYREGLPRVLLEAMAMGRPVIATDVP----GCREAVIDGVNGFLVPP--GDA 316 (359)
T ss_pred cceEEEeeccccHHHHH--HhccEEEecCcccCcchHHHHHHHcCCCEEEecCC----CchhhhhcCcceEEECC--CCH
Confidence 457888887543 3455 78999997764 57899999999999996433 34455666678887753 258
Q ss_pred HHHHHHHHHHhcCCC
Q psy10186 108 ESIAWATSIVLNNPR 122 (124)
Q Consensus 108 ~~l~~~l~~ll~~~~ 122 (124)
+++.+++.+++.++.
T Consensus 317 ~~~~~~i~~l~~~~~ 331 (359)
T cd03808 317 EALADAIERLIEDPE 331 (359)
T ss_pred HHHHHHHHHHHhCHH
Confidence 899999999887764
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria
Back Show alignment and domain information
Probab=98.33 E-value=6.4e-06 Score=58.50 Aligned_cols=85 Identities=24% Similarity=0.268 Sum_probs=62.0
Q ss_pred CCCcEEEeeccChHHhhcC-CCcceEEec----------CChhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEe
Q psy10186 32 LPGNVHIRKWIPQQDVLAH-PNCRLFISH----------GGVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVEL 100 (124)
Q Consensus 32 ~~~~v~~~~~~~~~~~l~~-~~~d~~i~~----------gG~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~ 100 (124)
.++++.+.++++..++... ..+|+++.. |...+++||+++|+|+|+.+... ..+.+.+...|..+
T Consensus 234 ~~~~v~~~g~~~~~~l~~~~~~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~----~~~~i~~~~~g~~~ 309 (355)
T cd03799 234 LEDRVTLLGAKSQEEVRELLRAADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSG----IPELVEDGETGLLV 309 (355)
T ss_pred CCCeEEECCcCChHHHHHHHHhCCEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCC----cchhhhCCCceEEe
Confidence 4578999999986553332 789998884 33478999999999999864322 23345555588877
Q ss_pred cCCCCCHHHHHHHHHHHhcCCC
Q psy10186 101 SYFNITLESIAWATSIVLNNPR 122 (124)
Q Consensus 101 ~~~~~~~~~l~~~l~~ll~~~~ 122 (124)
.++ +.+++.+++.++++++.
T Consensus 310 ~~~--~~~~l~~~i~~~~~~~~ 329 (355)
T cd03799 310 PPG--DPEALADAIERLLDDPE 329 (355)
T ss_pred CCC--CHHHHHHHHHHHHhCHH
Confidence 532 68999999999987764
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases
Back Show alignment and domain information
Probab=98.33 E-value=9.1e-06 Score=57.92 Aligned_cols=84 Identities=17% Similarity=0.036 Sum_probs=60.4
Q ss_pred CCCcEEEeeccCh-HHhhcCCCcceEEecC----ChhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecCCCCC
Q psy10186 32 LPGNVHIRKWIPQ-QDVLAHPNCRLFISHG----GVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNIT 106 (124)
Q Consensus 32 ~~~~v~~~~~~~~-~~~l~~~~~d~~i~~g----G~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~ 106 (124)
..+++.+.++..+ .+++ ..||+++... -..+++||+++|+|+|.-.. ....+.+.+ +.+..... -+
T Consensus 247 ~~~~v~~~g~~~~~~~~~--~~adi~v~ps~~E~~~~~~lEAma~G~PvI~s~~----~~~~~~i~~-~~~~~~~~--~~ 317 (358)
T cd03812 247 LEDKVIFLGVRNDVPELL--QAMDVFLFPSLYEGLPLVLIEAQASGLPCILSDT----ITKEVDLTD-LVKFLSLD--ES 317 (358)
T ss_pred CCCcEEEecccCCHHHHH--HhcCEEEecccccCCCHHHHHHHHhCCCEEEEcC----Cchhhhhcc-CccEEeCC--CC
Confidence 4578888887544 4455 7899998764 35789999999999998533 334445555 45554432 24
Q ss_pred HHHHHHHHHHHhcCCCCC
Q psy10186 107 LESIAWATSIVLNNPRRY 124 (124)
Q Consensus 107 ~~~l~~~l~~ll~~~~~r 124 (124)
.+++++++.+++++|..+
T Consensus 318 ~~~~a~~i~~l~~~~~~~ 335 (358)
T cd03812 318 PEIWAEEILKLKSEDRRE 335 (358)
T ss_pred HHHHHHHHHHHHhCcchh
Confidence 799999999999998753
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Back Show alignment and domain information
Probab=98.32 E-value=1.5e-05 Score=58.53 Aligned_cols=113 Identities=21% Similarity=0.302 Sum_probs=82.4
Q ss_pred HHHHHHHHHHHhhCCCeEEEEEcCCCCCCCCCcEEEeeccChHHhhcCCCcceE------EecCChhhHHHHHHhCCCee
Q psy10186 3 DGMRTLLVTAFSRTGLTVLWRYEGDSIENLPGNVHIRKWIPQQDVLAHPNCRLF------ISHGGVNSALEAIHYGIPII 76 (124)
Q Consensus 3 ~~~~~~~~~~l~~~~~~~i~~~g~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~------i~~gG~~t~~ea~~~g~P~l 76 (124)
+|.+.++.+.+.+.|..+.-.-..+ ......++.+.+-+-.+-++. .-+|+. +.+||+| .+|++++|+|+|
T Consensus 270 pERf~~v~~l~~~~gl~~~~rS~~~-~~~~~tdV~l~DtmGEL~l~y-~~adiAFVGGSlv~~GGHN-~LEpa~~~~pvi 346 (419)
T COG1519 270 PERFKAVENLLKRKGLSVTRRSQGD-PPFSDTDVLLGDTMGELGLLY-GIADIAFVGGSLVPIGGHN-PLEPAAFGTPVI 346 (419)
T ss_pred hhhHHHHHHHHHHcCCeEEeecCCC-CCCCCCcEEEEecHhHHHHHH-hhccEEEECCcccCCCCCC-hhhHHHcCCCEE
Confidence 4566666666666666554332221 222344788888665544443 677774 3466775 999999999999
Q ss_pred eecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCC
Q psy10186 77 GVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPR 122 (124)
Q Consensus 77 ~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~ 122 (124)
..|...+|...++.+.+.|+++.+. +.+.+.+++..++.|+.
T Consensus 347 ~Gp~~~Nf~ei~~~l~~~ga~~~v~----~~~~l~~~v~~l~~~~~ 388 (419)
T COG1519 347 FGPYTFNFSDIAERLLQAGAGLQVE----DADLLAKAVELLLADED 388 (419)
T ss_pred eCCccccHHHHHHHHHhcCCeEEEC----CHHHHHHHHHHhcCCHH
Confidence 9999999999999999999999998 58888888888877653
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases
Back Show alignment and domain information
Probab=98.32 E-value=6.2e-06 Score=57.60 Aligned_cols=84 Identities=18% Similarity=0.290 Sum_probs=59.5
Q ss_pred CCCcEEEeeccC-hHHhhcCCCcceEEecCC----hhhHHHHHHhCCCeeeecccccHHHHHHHHHHcC-ceeEecCCCC
Q psy10186 32 LPGNVHIRKWIP-QQDVLAHPNCRLFISHGG----VNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLG-AGVELSYFNI 105 (124)
Q Consensus 32 ~~~~v~~~~~~~-~~~~l~~~~~d~~i~~gG----~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g-~g~~~~~~~~ 105 (124)
...++.+.++.. ...++ ..+|+++..+. .++++||+++|+|+|+.+....+ ..+.+.+ .|..+.. .
T Consensus 233 ~~~~v~~~g~~~~~~~~~--~~ad~~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~----~~~~~~~~~g~~~~~--~ 304 (348)
T cd03820 233 LEDRVILLGFTKNIEEYY--AKASIFVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGP----SEIIEDGVNGLLVPN--G 304 (348)
T ss_pred CCCeEEEcCCcchHHHHH--HhCCEEEeCccccccCHHHHHHHHcCCCEEEecCCCch----HhhhccCcceEEeCC--C
Confidence 356788887743 34455 78999988763 56899999999999986543322 2233444 7887753 3
Q ss_pred CHHHHHHHHHHHhcCCCC
Q psy10186 106 TLESIAWATSIVLNNPRR 123 (124)
Q Consensus 106 ~~~~l~~~l~~ll~~~~~ 123 (124)
+.+++.+++.+++++++.
T Consensus 305 ~~~~~~~~i~~ll~~~~~ 322 (348)
T cd03820 305 DVEALAEALLRLMEDEEL 322 (348)
T ss_pred CHHHHHHHHHHHHcCHHH
Confidence 579999999999988753
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases
Back Show alignment and domain information
Probab=98.31 E-value=7.2e-06 Score=59.44 Aligned_cols=84 Identities=23% Similarity=0.163 Sum_probs=61.7
Q ss_pred CCCcEEEeeccChHHhhcC-CCcceEEecCC----hhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecCCCCC
Q psy10186 32 LPGNVHIRKWIPQQDVLAH-PNCRLFISHGG----VNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNIT 106 (124)
Q Consensus 32 ~~~~v~~~~~~~~~~~l~~-~~~d~~i~~gG----~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~ 106 (124)
..+++.+.++++..++... ..+|+++.... ..+++||+++|+|+|..-. ....+.+.+.+.|..+.. +
T Consensus 278 l~~~V~f~g~~~~~~~~~~l~~ad~~l~~s~~E~~g~~~lEAma~G~PvI~s~~----~~~~e~i~~~~~g~~~~~---~ 350 (392)
T cd03805 278 LEDQVIFLPSISDSQKELLLSSARALLYTPSNEHFGIVPLEAMYAGKPVIACNS----GGPLETVVDGETGFLCEP---T 350 (392)
T ss_pred CCceEEEeCCCChHHHHHHHhhCeEEEECCCcCCCCchHHHHHHcCCCEEEECC----CCcHHHhccCCceEEeCC---C
Confidence 3568999999997653221 78999886542 3678999999999999632 234455666667877752 6
Q ss_pred HHHHHHHHHHHhcCCC
Q psy10186 107 LESIAWATSIVLNNPR 122 (124)
Q Consensus 107 ~~~l~~~l~~ll~~~~ 122 (124)
.+++.+++.+++++++
T Consensus 351 ~~~~a~~i~~l~~~~~ 366 (392)
T cd03805 351 PEEFAEAMLKLANDPD 366 (392)
T ss_pred HHHHHHHHHHHHhChH
Confidence 8899999999998874
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases
Back Show alignment and domain information
Probab=98.29 E-value=5.3e-06 Score=59.54 Aligned_cols=99 Identities=17% Similarity=0.147 Sum_probs=68.9
Q ss_pred CCCeEEEEEcCCCC---------CCCCCcEEEeeccChHH-hhcCCCcceEEecC----ChhhHHHHHHhCCCeeeeccc
Q psy10186 16 TGLTVLWRYEGDSI---------ENLPGNVHIRKWIPQQD-VLAHPNCRLFISHG----GVNSALEAIHYGIPIIGVPFY 81 (124)
Q Consensus 16 ~~~~~i~~~g~~~~---------~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~g----G~~t~~ea~~~g~P~l~~P~~ 81 (124)
.+.+++++..+... .+..+++.+.++.+... ++ ..+|+++... ...+++||+++|+|+|+.
T Consensus 226 ~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~--~~~d~~v~ps~~E~~~~~~~EAma~g~PvI~s--- 300 (371)
T cd04962 226 VPARLLLVGDGPERSPAERLARELGLQDDVLFLGKQDHVEELL--SIADLFLLPSEKESFGLAALEAMACGVPVVAS--- 300 (371)
T ss_pred CCceEEEEcCCcCHHHHHHHHHHcCCCceEEEecCcccHHHHH--HhcCEEEeCCCcCCCccHHHHHHHcCCCEEEe---
Confidence 35677665443221 12356788888876543 45 7899998664 356999999999999995
Q ss_pred ccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCC
Q psy10186 82 GDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPR 122 (124)
Q Consensus 82 ~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~ 122 (124)
+.....+.+.+...|..+.+ .+.+++.+++.++++++.
T Consensus 301 -~~~~~~e~i~~~~~G~~~~~--~~~~~l~~~i~~l~~~~~ 338 (371)
T cd04962 301 -NAGGIPEVVKHGETGFLVDV--GDVEAMAEYALSLLEDDE 338 (371)
T ss_pred -CCCCchhhhcCCCceEEcCC--CCHHHHHHHHHHHHhCHH
Confidence 33345666666677877753 258889999999887654
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase
Back Show alignment and domain information
Probab=98.25 E-value=7.7e-06 Score=59.78 Aligned_cols=85 Identities=16% Similarity=0.139 Sum_probs=62.1
Q ss_pred CCCcEEEeeccChHHhhcC-CCcceEEecC----ChhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecCCCCC
Q psy10186 32 LPGNVHIRKWIPQQDVLAH-PNCRLFISHG----GVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNIT 106 (124)
Q Consensus 32 ~~~~v~~~~~~~~~~~l~~-~~~d~~i~~g----G~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~ 106 (124)
..+++.+.++++..++... ..+|+++... ...+++||+++|+|+|.... ....+.+.+...|..+.+ -+
T Consensus 281 l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~E~~g~~~lEAma~G~Pvi~~~~----~~~~e~i~~~~~g~~~~~--~d 354 (405)
T TIGR03449 281 IADRVRFLPPRPPEELVHVYRAADVVAVPSYNESFGLVAMEAQACGTPVVAARV----GGLPVAVADGETGLLVDG--HD 354 (405)
T ss_pred CCceEEECCCCCHHHHHHHHHhCCEEEECCCCCCcChHHHHHHHcCCCEEEecC----CCcHhhhccCCceEECCC--CC
Confidence 3468999999987653222 8899988643 24689999999999999643 334455666677887753 36
Q ss_pred HHHHHHHHHHHhcCCC
Q psy10186 107 LESIAWATSIVLNNPR 122 (124)
Q Consensus 107 ~~~l~~~l~~ll~~~~ 122 (124)
.+++.+++.++++++.
T Consensus 355 ~~~la~~i~~~l~~~~ 370 (405)
T TIGR03449 355 PADWADALARLLDDPR 370 (405)
T ss_pred HHHHHHHHHHHHhCHH
Confidence 8899999999987754
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases
Back Show alignment and domain information
Probab=98.22 E-value=6.4e-06 Score=60.25 Aligned_cols=84 Identities=24% Similarity=0.294 Sum_probs=63.0
Q ss_pred CCcEEEeeccChHHhhcC-CCcceEEecCC----hhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecCCCCCH
Q psy10186 33 PGNVHIRKWIPQQDVLAH-PNCRLFISHGG----VNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITL 107 (124)
Q Consensus 33 ~~~v~~~~~~~~~~~l~~-~~~d~~i~~gG----~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~ 107 (124)
.+++.+.+++|+.++... ..+|+++..+- ..+++|||++|+|+|.. +.....+.+.+...|..+.+. +.
T Consensus 280 ~~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas----~~~g~~e~i~~~~~G~lv~~~--d~ 353 (396)
T cd03818 280 LSRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGS----DTAPVREVITDGENGLLVDFF--DP 353 (396)
T ss_pred cceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEc----CCCCchhhcccCCceEEcCCC--CH
Confidence 468999999997764322 78999876442 24799999999999995 444556666666678877532 58
Q ss_pred HHHHHHHHHHhcCCC
Q psy10186 108 ESIAWATSIVLNNPR 122 (124)
Q Consensus 108 ~~l~~~l~~ll~~~~ 122 (124)
+++.+++.+++++++
T Consensus 354 ~~la~~i~~ll~~~~ 368 (396)
T cd03818 354 DALAAAVIELLDDPA 368 (396)
T ss_pred HHHHHHHHHHHhCHH
Confidence 999999999998864
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases
Back Show alignment and domain information
Probab=98.22 E-value=1.1e-05 Score=57.59 Aligned_cols=83 Identities=19% Similarity=0.207 Sum_probs=60.2
Q ss_pred CCCcEEEeeccC-hHH---hhcCCCcceEEecCC----hhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecCC
Q psy10186 32 LPGNVHIRKWIP-QQD---VLAHPNCRLFISHGG----VNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYF 103 (124)
Q Consensus 32 ~~~~v~~~~~~~-~~~---~l~~~~~d~~i~~gG----~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~ 103 (124)
...++.+.++++ ..+ ++ ..+|+++..+. ..+++||+++|+|+|+.... ...+.+.+.+.|..+..
T Consensus 242 ~~~~v~~~g~~~~~~~~~~~~--~~ad~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~----~~~e~~~~~~~g~~~~~- 314 (365)
T cd03825 242 LPFPVHYLGSLNDDESLALIY--SAADVFVVPSLQENFPNTAIEALACGTPVVAFDVG----GIPDIVDHGVTGYLAKP- 314 (365)
T ss_pred CCCceEecCCcCCHHHHHHHH--HhCCEEEeccccccccHHHHHHHhcCCCEEEecCC----CChhheeCCCceEEeCC-
Confidence 456788999998 433 34 78999998653 57899999999999986432 23334444457777652
Q ss_pred CCCHHHHHHHHHHHhcCCC
Q psy10186 104 NITLESIAWATSIVLNNPR 122 (124)
Q Consensus 104 ~~~~~~l~~~l~~ll~~~~ 122 (124)
.+.+++.+++.++++++.
T Consensus 315 -~~~~~~~~~l~~l~~~~~ 332 (365)
T cd03825 315 -GDPEDLAEGIEWLLADPD 332 (365)
T ss_pred -CCHHHHHHHHHHHHhCHH
Confidence 368899999999998764
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli
Back Show alignment and domain information
Probab=98.20 E-value=1e-05 Score=57.60 Aligned_cols=93 Identities=16% Similarity=0.180 Sum_probs=63.1
Q ss_pred CCeEEEEEcCCCC---------CCCCCcEEEeeccCh-HHhhcCCCcceEEecCC----hhhHHHHHHhCCCeeeecccc
Q psy10186 17 GLTVLWRYEGDSI---------ENLPGNVHIRKWIPQ-QDVLAHPNCRLFISHGG----VNSALEAIHYGIPIIGVPFYG 82 (124)
Q Consensus 17 ~~~~i~~~g~~~~---------~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~gG----~~t~~ea~~~g~P~l~~P~~~ 82 (124)
+++++++.++... .+..+++.+.++... .+++ ..+|+++.... .++++||+++|+|+|+.
T Consensus 219 ~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~--~~ad~~v~~s~~e~~~~~~~Ea~a~G~PvI~~---- 292 (360)
T cd04951 219 DIKLLIAGDGPLRATLERLIKALGLSNRVKLLGLRDDIAAYY--NAADLFVLSSAWEGFGLVVAEAMACELPVVAT---- 292 (360)
T ss_pred CeEEEEEcCCCcHHHHHHHHHhcCCCCcEEEecccccHHHHH--HhhceEEecccccCCChHHHHHHHcCCCEEEe----
Confidence 4677766543321 124568888887754 3455 78999888764 57899999999999985
Q ss_pred cHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhc
Q psy10186 83 DQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLN 119 (124)
Q Consensus 83 ~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~ 119 (124)
+.....+.+++ .|..+.. .+.+++.+++.++++
T Consensus 293 ~~~~~~e~i~~--~g~~~~~--~~~~~~~~~i~~ll~ 325 (360)
T cd04951 293 DAGGVREVVGD--SGLIVPI--SDPEALANKIDEILK 325 (360)
T ss_pred cCCChhhEecC--CceEeCC--CCHHHHHHHHHHHHh
Confidence 33445555555 3444432 378899999999984
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases
Back Show alignment and domain information
Probab=98.20 E-value=3.2e-05 Score=55.05 Aligned_cols=79 Identities=19% Similarity=0.156 Sum_probs=56.6
Q ss_pred CCCcEEEeeccCh-HHhhcCCCcceEEecC-----ChhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecCCCC
Q psy10186 32 LPGNVHIRKWIPQ-QDVLAHPNCRLFISHG-----GVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNI 105 (124)
Q Consensus 32 ~~~~v~~~~~~~~-~~~l~~~~~d~~i~~g-----G~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~ 105 (124)
..+++.+.++.+. ..++ ..+|++++.+ ...+++||+++|+|+|+. +-....+.+.+.+.|..+.. -
T Consensus 244 ~~~~v~~~g~~~~~~~~l--~~ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~----~~~~~~e~i~~~~~g~~~~~--~ 315 (355)
T cd03819 244 LQDRVTFVGHCSDMPAAY--ALADIVVSASTEPEAFGRTAVEAQAMGRPVIAS----DHGGARETVRPGETGLLVPP--G 315 (355)
T ss_pred CcceEEEcCCcccHHHHH--HhCCEEEecCCCCCCCchHHHHHHhcCCCEEEc----CCCCcHHHHhCCCceEEeCC--C
Confidence 3567999988554 3344 7899988766 246899999999999985 33344556666668888753 3
Q ss_pred CHHHHHHHHHHHh
Q psy10186 106 TLESIAWATSIVL 118 (124)
Q Consensus 106 ~~~~l~~~l~~ll 118 (124)
+.+++.+++..++
T Consensus 316 ~~~~l~~~i~~~~ 328 (355)
T cd03819 316 DAEALAQALDQIL 328 (355)
T ss_pred CHHHHHHHHHHHH
Confidence 6888999886554
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated
Back Show alignment and domain information
Probab=98.19 E-value=5.1e-06 Score=60.04 Aligned_cols=82 Identities=17% Similarity=0.157 Sum_probs=58.8
Q ss_pred CCcEEEeeccCh-HHhhcCCCcceEEecC----ChhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecCCCCCH
Q psy10186 33 PGNVHIRKWIPQ-QDVLAHPNCRLFISHG----GVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITL 107 (124)
Q Consensus 33 ~~~v~~~~~~~~-~~~l~~~~~d~~i~~g----G~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~ 107 (124)
..++.+.++... .+++ ..+|+++..+ -..+++||+++|+|+|+-.. ....+.+.+...|..+.. -+.
T Consensus 254 ~~~v~~~g~~~~~~~~~--~~adi~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~----~g~~e~i~~~~~g~~~~~--~d~ 325 (374)
T TIGR03088 254 AHLVWLPGERDDVPALM--QALDLFVLPSLAEGISNTILEAMASGLPVIATAV----GGNPELVQHGVTGALVPP--GDA 325 (374)
T ss_pred cceEEEcCCcCCHHHHH--HhcCEEEeccccccCchHHHHHHHcCCCEEEcCC----CCcHHHhcCCCceEEeCC--CCH
Confidence 456677665443 4455 7899998653 35789999999999999643 335556666667887753 367
Q ss_pred HHHHHHHHHHhcCCC
Q psy10186 108 ESIAWATSIVLNNPR 122 (124)
Q Consensus 108 ~~l~~~l~~ll~~~~ 122 (124)
+++.+++.++++++.
T Consensus 326 ~~la~~i~~l~~~~~ 340 (374)
T TIGR03088 326 VALARALQPYVSDPA 340 (374)
T ss_pred HHHHHHHHHHHhCHH
Confidence 899999999987753
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases
Back Show alignment and domain information
Probab=98.17 E-value=1.1e-05 Score=56.81 Aligned_cols=81 Identities=21% Similarity=0.241 Sum_probs=57.2
Q ss_pred CCCcEEEeeccCh-HHhhcCCCcceEEecCC----hhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecCCCCC
Q psy10186 32 LPGNVHIRKWIPQ-QDVLAHPNCRLFISHGG----VNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNIT 106 (124)
Q Consensus 32 ~~~~v~~~~~~~~-~~~l~~~~~d~~i~~gG----~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~ 106 (124)
...++.+.+..+. .+++ ..+|+++..+. .++++||+++|+|+|+.. ...+.+.+.+ .|..+..+ +
T Consensus 249 ~~~~v~~~g~~~~~~~~~--~~adi~v~ps~~e~~~~~~~Ea~a~g~PvI~~~----~~~~~e~~~~--~g~~~~~~--~ 318 (365)
T cd03807 249 LEDKVILLGERSDVPALL--NALDVFVLSSLSEGFPNVLLEAMACGLPVVATD----VGDNAELVGD--TGFLVPPG--D 318 (365)
T ss_pred CCceEEEccccccHHHHH--HhCCEEEeCCccccCCcHHHHHHhcCCCEEEcC----CCChHHHhhc--CCEEeCCC--C
Confidence 3456777765543 3455 78999998764 479999999999999853 3334555554 56666432 5
Q ss_pred HHHHHHHHHHHhcCCC
Q psy10186 107 LESIAWATSIVLNNPR 122 (124)
Q Consensus 107 ~~~l~~~l~~ll~~~~ 122 (124)
.+++.+++.++++++.
T Consensus 319 ~~~l~~~i~~l~~~~~ 334 (365)
T cd03807 319 PEALAEAIEALLADPA 334 (365)
T ss_pred HHHHHHHHHHHHhChH
Confidence 8899999999988754
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases
Back Show alignment and domain information
Probab=98.15 E-value=1.3e-05 Score=59.30 Aligned_cols=79 Identities=20% Similarity=0.274 Sum_probs=58.5
Q ss_pred CcEEEe-eccChHHhhcC-CCcceEEec----CC---hhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecCCC
Q psy10186 34 GNVHIR-KWIPQQDVLAH-PNCRLFISH----GG---VNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFN 104 (124)
Q Consensus 34 ~~v~~~-~~~~~~~~l~~-~~~d~~i~~----gG---~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~ 104 (124)
+++.+. +|++..++... ..+|++++. .| ..+++||+++|+|+|+. +.....+.+++.+.|..+.
T Consensus 294 ~~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s----~~~~~~eiv~~~~~G~lv~--- 366 (415)
T cd03816 294 KKVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAL----DFKCIDELVKHGENGLVFG--- 366 (415)
T ss_pred CcEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEe----CCCCHHHHhcCCCCEEEEC---
Confidence 355544 68886664322 789998841 12 35799999999999995 3345667777778898884
Q ss_pred CCHHHHHHHHHHHhcC
Q psy10186 105 ITLESIAWATSIVLNN 120 (124)
Q Consensus 105 ~~~~~l~~~l~~ll~~ 120 (124)
+.+++++++.+++++
T Consensus 367 -d~~~la~~i~~ll~~ 381 (415)
T cd03816 367 -DSEELAEQLIDLLSN 381 (415)
T ss_pred -CHHHHHHHHHHHHhc
Confidence 789999999999987
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family
Back Show alignment and domain information
Probab=98.13 E-value=1.5e-05 Score=57.71 Aligned_cols=113 Identities=19% Similarity=0.200 Sum_probs=72.3
Q ss_pred HHHHHHHHhhC--CCeEEEEEcCCCCC-----------C---CCCcEEEe-eccChHHhhcC-CCcceEEecC----Chh
Q psy10186 6 RTLLVTAFSRT--GLTVLWRYEGDSIE-----------N---LPGNVHIR-KWIPQQDVLAH-PNCRLFISHG----GVN 63 (124)
Q Consensus 6 ~~~~~~~l~~~--~~~~i~~~g~~~~~-----------~---~~~~v~~~-~~~~~~~~l~~-~~~d~~i~~g----G~~ 63 (124)
+..+++++... +.+++++.++.... . ...++.+. ++++..++... ..+|+++..+ ...
T Consensus 216 ~~~li~a~~~l~~~~~l~i~g~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~aDv~v~ps~~e~~g~ 295 (388)
T TIGR02149 216 VPHLLDAVHYIPKDVQVVLCAGAPDTPEVAEEVRQAVALLDRNRTGIIWINKMLPKEELVELLSNAEVFVCPSIYEPLGI 295 (388)
T ss_pred HHHHHHHHHHHhhcCcEEEEeCCCCcHHHHHHHHHHHHHhccccCceEEecCCCCHHHHHHHHHhCCEEEeCCccCCCCh
Confidence 45566666554 45666655442210 1 12345543 56776543222 7899998764 245
Q ss_pred hHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecCCCCC----HHHHHHHHHHHhcCCC
Q psy10186 64 SALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNIT----LESIAWATSIVLNNPR 122 (124)
Q Consensus 64 t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~----~~~l~~~l~~ll~~~~ 122 (124)
+++||+++|+|+|+.. .....+.+++.+.|..+.+++.+ .+++.+++.++++++.
T Consensus 296 ~~lEA~a~G~PvI~s~----~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~~~~~ 354 (388)
T TIGR02149 296 VNLEAMACGTPVVASA----TGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILLADPE 354 (388)
T ss_pred HHHHHHHcCCCEEEeC----CCCHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHHHhCHH
Confidence 7899999999999863 33456667777788888754432 2789999999987764
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases
Back Show alignment and domain information
Probab=98.13 E-value=1.5e-05 Score=56.31 Aligned_cols=106 Identities=15% Similarity=0.075 Sum_probs=72.8
Q ss_pred HHHHHHHHhhCCCeEEEEEcCCCC-------CC---CCCcEEEeeccChHHhhcC-CCcceEEecC----C-hhhHHHHH
Q psy10186 6 RTLLVTAFSRTGLTVLWRYEGDSI-------EN---LPGNVHIRKWIPQQDVLAH-PNCRLFISHG----G-VNSALEAI 69 (124)
Q Consensus 6 ~~~~~~~l~~~~~~~i~~~g~~~~-------~~---~~~~v~~~~~~~~~~~l~~-~~~d~~i~~g----G-~~t~~ea~ 69 (124)
...+++++.+.+.++++..+.... .. ..+++.+.++++..++... ..+|+++... | ..+++||+
T Consensus 186 ~~~li~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~d~~v~ps~~~E~~~~~~lEAm 265 (335)
T cd03802 186 PHLAIRAARRAGIPLKLAGPVSDPDYFYREIAPELLDGPDIEYLGEVGGAEKAELLGNARALLFPILWEEPFGLVMIEAM 265 (335)
T ss_pred HHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhCcEEEeCCcccCCcchHHHHHH
Confidence 455677777778888766544321 11 2578999999987653221 7889987543 2 35899999
Q ss_pred HhCCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhc
Q psy10186 70 HYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLN 119 (124)
Q Consensus 70 ~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~ 119 (124)
++|+|+|.-. .....+.+.+...|..+. ..+++.+++.++..
T Consensus 266 a~G~PvI~~~----~~~~~e~i~~~~~g~l~~----~~~~l~~~l~~l~~ 307 (335)
T cd03802 266 ACGTPVIAFR----RGAVPEVVEDGVTGFLVD----SVEELAAAVARADR 307 (335)
T ss_pred hcCCCEEEeC----CCCchhheeCCCcEEEeC----CHHHHHHHHHHHhc
Confidence 9999999863 334445555555788876 38889999988754
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases
Back Show alignment and domain information
Probab=98.11 E-value=3.3e-05 Score=54.74 Aligned_cols=84 Identities=19% Similarity=0.278 Sum_probs=60.0
Q ss_pred CCCcEEEeec-cChHHhhcC-CCcceEEec------CChhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecCC
Q psy10186 32 LPGNVHIRKW-IPQQDVLAH-PNCRLFISH------GGVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYF 103 (124)
Q Consensus 32 ~~~~v~~~~~-~~~~~~l~~-~~~d~~i~~------gG~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~ 103 (124)
..+++.+.+. ++..++... ..+|+++.. +..++++||+++|+|+|..+... ...+.+.+.|..+..+
T Consensus 245 ~~~~v~~~~~~~~~~~~~~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-----~~~i~~~~~g~~~~~~ 319 (366)
T cd03822 245 LADRVIFINRYLPDEELPELFSAADVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-----AEEVLDGGTGLLVPPG 319 (366)
T ss_pred CCCcEEEecCcCCHHHHHHHHhhcCEEEecccccccccchHHHHHHHcCCCEEecCCCC-----hheeeeCCCcEEEcCC
Confidence 3467887764 876543322 889998854 33468999999999999865433 4445566778877643
Q ss_pred CCCHHHHHHHHHHHhcCCC
Q psy10186 104 NITLESIAWATSIVLNNPR 122 (124)
Q Consensus 104 ~~~~~~l~~~l~~ll~~~~ 122 (124)
+.+++.+++.++++++.
T Consensus 320 --d~~~~~~~l~~l~~~~~ 336 (366)
T cd03822 320 --DPAALAEAIRRLLADPE 336 (366)
T ss_pred --CHHHHHHHHHHHHcChH
Confidence 48899999999998753
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases
Back Show alignment and domain information
Probab=98.06 E-value=4.8e-06 Score=59.05 Aligned_cols=84 Identities=20% Similarity=0.236 Sum_probs=57.3
Q ss_pred CCCcEEEeeccChHHhhcC-CCcceEEecC----ChhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecCCCCC
Q psy10186 32 LPGNVHIRKWIPQQDVLAH-PNCRLFISHG----GVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNIT 106 (124)
Q Consensus 32 ~~~~v~~~~~~~~~~~l~~-~~~d~~i~~g----G~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~ 106 (124)
...++.+.++++..++... ..+|+++..+ ...+++||+++|+|+|+-.... ..+.+. ..|..+..+ +
T Consensus 251 ~~~~v~~~g~~~~~~~~~~~~~~d~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~----~~e~~~--~~~~~~~~~--~ 322 (365)
T cd03809 251 LGDRVRFLGYVSDEELAALYRGARAFVFPSLYEGFGLPVLEAMACGTPVIASNISS----LPEVAG--DAALYFDPL--D 322 (365)
T ss_pred CCCeEEECCCCChhHHHHHHhhhhhhcccchhccCCCCHHHHhcCCCcEEecCCCC----ccceec--CceeeeCCC--C
Confidence 5678999999987653322 7899987653 3468999999999999853321 122222 234444322 6
Q ss_pred HHHHHHHHHHHhcCCCC
Q psy10186 107 LESIAWATSIVLNNPRR 123 (124)
Q Consensus 107 ~~~l~~~l~~ll~~~~~ 123 (124)
.+++.+++.+++.++..
T Consensus 323 ~~~~~~~i~~l~~~~~~ 339 (365)
T cd03809 323 PEALAAAIERLLEDPAL 339 (365)
T ss_pred HHHHHHHHHHHhcCHHH
Confidence 89999999999887653
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases
Back Show alignment and domain information
Probab=98.04 E-value=6.4e-05 Score=52.50 Aligned_cols=83 Identities=23% Similarity=0.254 Sum_probs=58.2
Q ss_pred CCCcEEEeeccChH-HhhcCCCcceEEecC----ChhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecCCCCC
Q psy10186 32 LPGNVHIRKWIPQQ-DVLAHPNCRLFISHG----GVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNIT 106 (124)
Q Consensus 32 ~~~~v~~~~~~~~~-~~l~~~~~d~~i~~g----G~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~ 106 (124)
..+++.+.++.+.. +++ ..+|++|... ..++++||+++|+|+|+. +-....+.+.+...|..+.++ +
T Consensus 244 ~~~~v~~~g~~~~~~~~~--~~~d~~i~ps~~e~~~~~~~Ea~~~G~PvI~~----~~~~~~e~i~~~~~g~~~~~~--~ 315 (353)
T cd03811 244 LADRVHFLGFQSNPYPYL--KAADLFVLSSRYEGFPNVLLEAMALGTPVVAT----DCPGPREILEDGENGLLVPVG--D 315 (353)
T ss_pred CCccEEEecccCCHHHHH--HhCCEEEeCcccCCCCcHHHHHHHhCCCEEEc----CCCChHHHhcCCCceEEECCC--C
Confidence 45688888887653 345 7899988654 357899999999999985 333566777778889888643 4
Q ss_pred HHHH---HHHHHHHhcCCC
Q psy10186 107 LESI---AWATSIVLNNPR 122 (124)
Q Consensus 107 ~~~l---~~~l~~ll~~~~ 122 (124)
.+.+ .+.+.++..++.
T Consensus 316 ~~~~~~~~~~i~~~~~~~~ 334 (353)
T cd03811 316 EAALAAAALALLDLLLDPE 334 (353)
T ss_pred HHHHHHHHHHHHhccCChH
Confidence 5555 555555555543
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated
Back Show alignment and domain information
Probab=98.01 E-value=4.1e-05 Score=56.09 Aligned_cols=81 Identities=19% Similarity=0.220 Sum_probs=56.9
Q ss_pred CCcEEEeeccChHHhhcCCCcceEEecC----Ch-hhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecCCCCCH
Q psy10186 33 PGNVHIRKWIPQQDVLAHPNCRLFISHG----GV-NSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITL 107 (124)
Q Consensus 33 ~~~v~~~~~~~~~~~l~~~~~d~~i~~g----G~-~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~ 107 (124)
.+++.+.++++...-+. ..+|++|... |. +.++||+++|+|+|+.+...+.. .+..|.|..+. .+.
T Consensus 279 ~~~V~~~G~v~~~~~~~-~~adv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~~i-----~~~~~~g~lv~---~~~ 349 (397)
T TIGR03087 279 LPGVTVTGSVADVRPYL-AHAAVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAAEGI-----DALPGAELLVA---ADP 349 (397)
T ss_pred CCCeEEeeecCCHHHHH-HhCCEEEecccccCCcccHHHHHHHcCCCEEecCcccccc-----cccCCcceEeC---CCH
Confidence 46799999988544332 7899987432 33 36999999999999975432211 12235676663 278
Q ss_pred HHHHHHHHHHhcCCC
Q psy10186 108 ESIAWATSIVLNNPR 122 (124)
Q Consensus 108 ~~l~~~l~~ll~~~~ 122 (124)
+++.+++.++++|+.
T Consensus 350 ~~la~ai~~ll~~~~ 364 (397)
T TIGR03087 350 ADFAAAILALLANPA 364 (397)
T ss_pred HHHHHHHHHHHcCHH
Confidence 999999999998764
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain
Back Show alignment and domain information
Probab=98.01 E-value=1.7e-05 Score=58.98 Aligned_cols=85 Identities=26% Similarity=0.273 Sum_probs=61.1
Q ss_pred CCCcEEEeeccChHHhhcC-CC----cceEEecC---C-hhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecC
Q psy10186 32 LPGNVHIRKWIPQQDVLAH-PN----CRLFISHG---G-VNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSY 102 (124)
Q Consensus 32 ~~~~v~~~~~~~~~~~l~~-~~----~d~~i~~g---G-~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~ 102 (124)
..+++.+.++++..++... .. +|+++..+ | ..+++||+++|+|+|+- +.....+.+.+...|..+.+
T Consensus 315 l~~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s----~~gg~~eiv~~~~~G~lv~~ 390 (439)
T TIGR02472 315 LYGKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGLPIVAT----DDGGPRDIIANCRNGLLVDV 390 (439)
T ss_pred CCceEEecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCCCEEEe----CCCCcHHHhcCCCcEEEeCC
Confidence 3467888888776554221 33 48988765 3 46899999999999996 33445566666667888764
Q ss_pred CCCCHHHHHHHHHHHhcCCC
Q psy10186 103 FNITLESIAWATSIVLNNPR 122 (124)
Q Consensus 103 ~~~~~~~l~~~l~~ll~~~~ 122 (124)
. +.+++.+++.++++++.
T Consensus 391 ~--d~~~la~~i~~ll~~~~ 408 (439)
T TIGR02472 391 L--DLEAIASALEDALSDSS 408 (439)
T ss_pred C--CHHHHHHHHHHHHhCHH
Confidence 3 58899999999988764
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose
Back Show alignment and domain information
Probab=98.01 E-value=4e-05 Score=55.55 Aligned_cols=81 Identities=19% Similarity=0.200 Sum_probs=56.9
Q ss_pred CCCcEEEeecc--ChHH---hhcCCCcceEEecCC----hhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecC
Q psy10186 32 LPGNVHIRKWI--PQQD---VLAHPNCRLFISHGG----VNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSY 102 (124)
Q Consensus 32 ~~~~v~~~~~~--~~~~---~l~~~~~d~~i~~gG----~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~ 102 (124)
..+++.+.++. +..+ ++ ..+|+++..+- ..+++||+++|+|+|+.... ...+.+.+...|..+.
T Consensus 250 ~~~~v~~~~~~~~~~~~~~~~~--~~ad~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~----~~~~~i~~~~~g~~~~- 322 (372)
T cd03792 250 GDPDIHVLTLPPVSDLEVNALQ--RASTVVLQKSIREGFGLTVTEALWKGKPVIAGPVG----GIPLQIEDGETGFLVD- 322 (372)
T ss_pred CCCCeEEEecCCCCHHHHHHHH--HhCeEEEeCCCccCCCHHHHHHHHcCCCEEEcCCC----CchhhcccCCceEEeC-
Confidence 34578888876 4433 34 78999987663 35899999999999986432 3344566666777765
Q ss_pred CCCCHHHHHHHHHHHhcCCC
Q psy10186 103 FNITLESIAWATSIVLNNPR 122 (124)
Q Consensus 103 ~~~~~~~l~~~l~~ll~~~~ 122 (124)
+.+++..++.+++++++
T Consensus 323 ---~~~~~a~~i~~ll~~~~ 339 (372)
T cd03792 323 ---TVEEAAVRILYLLRDPE 339 (372)
T ss_pred ---CcHHHHHHHHHHHcCHH
Confidence 45677778888887764
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases
Back Show alignment and domain information
Probab=97.99 E-value=9.9e-05 Score=55.54 Aligned_cols=83 Identities=25% Similarity=0.303 Sum_probs=62.0
Q ss_pred CCCcEEEeeccChHHhhcCCCcceEEecC----ChhhHHHHHHhCCCeeeecccccHHHHHHHHHHc------CceeEec
Q psy10186 32 LPGNVHIRKWIPQQDVLAHPNCRLFISHG----GVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDL------GAGVELS 101 (124)
Q Consensus 32 ~~~~v~~~~~~~~~~~l~~~~~d~~i~~g----G~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~------g~g~~~~ 101 (124)
..+++.+.+..+..+++ ..+|+++..+ -..+++||+++|+|+|.- +.....+.+.+. ..|..+.
T Consensus 352 l~~~V~f~G~~~v~~~l--~~aDv~vlpS~~Eg~p~~vlEAma~G~PVVat----d~g~~~elv~~~~~~~~g~~G~lv~ 425 (475)
T cd03813 352 LEDNVKFTGFQNVKEYL--PKLDVLVLTSISEGQPLVILEAMAAGIPVVAT----DVGSCRELIEGADDEALGPAGEVVP 425 (475)
T ss_pred CCCeEEEcCCccHHHHH--HhCCEEEeCchhhcCChHHHHHHHcCCCEEEC----CCCChHHHhcCCcccccCCceEEEC
Confidence 45789999866667777 7899988665 347899999999999994 434445555552 3677775
Q ss_pred CCCCCHHHHHHHHHHHhcCCC
Q psy10186 102 YFNITLESIAWATSIVLNNPR 122 (124)
Q Consensus 102 ~~~~~~~~l~~~l~~ll~~~~ 122 (124)
+ .+.+++.+++.++++|+.
T Consensus 426 ~--~d~~~la~ai~~ll~~~~ 444 (475)
T cd03813 426 P--ADPEALARAILRLLKDPE 444 (475)
T ss_pred C--CCHHHHHHHHHHHhcCHH
Confidence 3 368999999999998764
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Back Show alignment and domain information
Probab=97.99 E-value=8.8e-05 Score=58.33 Aligned_cols=84 Identities=14% Similarity=0.127 Sum_probs=61.7
Q ss_pred CCCcEEEeeccChHHhhcCCCcceEEecC---C-hhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecCCCCCH
Q psy10186 32 LPGNVHIRKWIPQQDVLAHPNCRLFISHG---G-VNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITL 107 (124)
Q Consensus 32 ~~~~v~~~~~~~~~~~l~~~~~d~~i~~g---G-~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~ 107 (124)
..++|.+.+|.+....+. ..+|+++..+ | .++++||+++|+|+|.... ....+.+.+...|..+.+++.+.
T Consensus 572 L~~~V~flG~~~dv~~ll-~aaDv~VlpS~~Egfp~vlLEAMA~G~PVVat~~----gG~~EiV~dg~~GlLv~~~d~~~ 646 (694)
T PRK15179 572 MGERILFTGLSRRVGYWL-TQFNAFLLLSRFEGLPNVLIEAQFSGVPVVTTLA----GGAGEAVQEGVTGLTLPADTVTA 646 (694)
T ss_pred CCCcEEEcCCcchHHHHH-HhcCEEEeccccccchHHHHHHHHcCCeEEEECC----CChHHHccCCCCEEEeCCCCCCh
Confidence 457899999987544333 7899988743 3 4789999999999999633 34556666667899988777677
Q ss_pred HHHHHHHHHHhcC
Q psy10186 108 ESIAWATSIVLNN 120 (124)
Q Consensus 108 ~~l~~~l~~ll~~ 120 (124)
+++.+++.+++.+
T Consensus 647 ~~La~aL~~ll~~ 659 (694)
T PRK15179 647 PDVAEALARIHDM 659 (694)
T ss_pred HHHHHHHHHHHhC
Confidence 7777777776643
>PLN02275 transferase, transferring glycosyl groups
Back Show alignment and domain information
Probab=97.98 E-value=4.3e-05 Score=55.69 Aligned_cols=77 Identities=19% Similarity=0.238 Sum_probs=55.7
Q ss_pred CcEEEee-ccChHHhhcC-CCcceEEec--C--C---hhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecCCC
Q psy10186 34 GNVHIRK-WIPQQDVLAH-PNCRLFISH--G--G---VNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFN 104 (124)
Q Consensus 34 ~~v~~~~-~~~~~~~l~~-~~~d~~i~~--g--G---~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~ 104 (124)
+|+.+.. |++..++-.. ..+|+++.. . | .++++||+++|+|+|... .....+.+++.+.|..+.
T Consensus 286 ~~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~----~gg~~eiv~~g~~G~lv~--- 358 (371)
T PLN02275 286 RHVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVS----YSCIGELVKDGKNGLLFS--- 358 (371)
T ss_pred CceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCCCCEEEec----CCChHHHccCCCCeEEEC---
Confidence 4566655 6887664222 889998842 1 1 357999999999999963 334667777778899886
Q ss_pred CCHHHHHHHHHHHh
Q psy10186 105 ITLESIAWATSIVL 118 (124)
Q Consensus 105 ~~~~~l~~~l~~ll 118 (124)
+.+++.+++.+++
T Consensus 359 -~~~~la~~i~~l~ 371 (371)
T PLN02275 359 -SSSELADQLLELL 371 (371)
T ss_pred -CHHHHHHHHHHhC
Confidence 5889999998874
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases
Back Show alignment and domain information
Probab=97.96 E-value=6.5e-05 Score=55.05 Aligned_cols=82 Identities=15% Similarity=0.149 Sum_probs=55.9
Q ss_pred CCCcEEEeeccChHHhhcC-CCcceEEecC---C-hhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecCCCCC
Q psy10186 32 LPGNVHIRKWIPQQDVLAH-PNCRLFISHG---G-VNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNIT 106 (124)
Q Consensus 32 ~~~~v~~~~~~~~~~~l~~-~~~d~~i~~g---G-~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~ 106 (124)
..+++.+.++++..++... ..+|+++..+ | ..+++||+++|+|+|+-+..+ ..+.+.+ |.+....+ +
T Consensus 248 l~~~v~~~G~~~~~~~~~~l~~ad~~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg----~~e~i~~-~~~~~~~~---~ 319 (398)
T cd03796 248 LQDRVELLGAVPHERVRDVLVQGHIFLNTSLTEAFCIAIVEAASCGLLVVSTRVGG----IPEVLPP-DMILLAEP---D 319 (398)
T ss_pred CCCeEEEeCCCCHHHHHHHHHhCCEEEeCChhhccCHHHHHHHHcCCCEEECCCCC----chhheeC-CceeecCC---C
Confidence 3567999999986553332 8899998765 2 248999999999999864432 2333333 33433322 6
Q ss_pred HHHHHHHHHHHhcCC
Q psy10186 107 LESIAWATSIVLNNP 121 (124)
Q Consensus 107 ~~~l~~~l~~ll~~~ 121 (124)
.+++.+++.++++++
T Consensus 320 ~~~l~~~l~~~l~~~ 334 (398)
T cd03796 320 VESIVRKLEEAISIL 334 (398)
T ss_pred HHHHHHHHHHHHhCh
Confidence 788999999888753
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
>PRK10307 putative glycosyl transferase; Provisional
Back Show alignment and domain information
Probab=97.93 E-value=6.4e-05 Score=55.23 Aligned_cols=83 Identities=16% Similarity=0.151 Sum_probs=56.5
Q ss_pred CcEEEeeccChHHhhcC-CCcceEEecC--C------hhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecCCC
Q psy10186 34 GNVHIRKWIPQQDVLAH-PNCRLFISHG--G------VNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFN 104 (124)
Q Consensus 34 ~~v~~~~~~~~~~~l~~-~~~d~~i~~g--G------~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~ 104 (124)
+++.+.++++..++... ..+|+++... + .+.+.|++++|+|+|+....+.. ..+.+. +.|..+.+
T Consensus 284 ~~v~f~G~~~~~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~--~~~~i~--~~G~~~~~-- 357 (412)
T PRK10307 284 PNVHFLPLQPYDRLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTE--LGQLVE--GIGVCVEP-- 357 (412)
T ss_pred CceEEeCCCCHHHHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCch--HHHHHh--CCcEEeCC--
Confidence 47999999987654222 7888865432 1 12368999999999997543321 122333 67888753
Q ss_pred CCHHHHHHHHHHHhcCCC
Q psy10186 105 ITLESIAWATSIVLNNPR 122 (124)
Q Consensus 105 ~~~~~l~~~l~~ll~~~~ 122 (124)
-+.+++.++|.++++++.
T Consensus 358 ~d~~~la~~i~~l~~~~~ 375 (412)
T PRK10307 358 ESVEALVAAIAALARQAL 375 (412)
T ss_pred CCHHHHHHHHHHHHhCHH
Confidence 358899999999988764
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A
Back Show alignment and domain information
Probab=97.91 E-value=2.4e-05 Score=48.59 Aligned_cols=94 Identities=21% Similarity=0.273 Sum_probs=53.9
Q ss_pred CCeEEEEEcCCC-CCCC-CCcEEEeeccChH-HhhcCCCcceEEecC-----ChhhHHHHHHhCCCeeeecccccHHHHH
Q psy10186 17 GLTVLWRYEGDS-IENL-PGNVHIRKWIPQQ-DVLAHPNCRLFISHG-----GVNSALEAIHYGIPIIGVPFYGDQLSHV 88 (124)
Q Consensus 17 ~~~~i~~~g~~~-~~~~-~~~v~~~~~~~~~-~~l~~~~~d~~i~~g-----G~~t~~ea~~~g~P~l~~P~~~~q~~~a 88 (124)
+.++++..+..+ ..+. .+++++.++++.. +.+ ..||+++... ..+++.|++++|+|+|+.+. ...
T Consensus 34 ~~~l~i~G~~~~~l~~~~~~~v~~~g~~~e~~~~l--~~~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-----~~~ 106 (135)
T PF13692_consen 34 DIELIIIGNGPDELKRLRRPNVRFHGFVEELPEIL--AAADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-----GAE 106 (135)
T ss_dssp TEEEEEECESS-HHCCHHHCTEEEE-S-HHHHHHH--HC-SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-----HCH
T ss_pred CEEEEEEeCCHHHHHHhcCCCEEEcCCHHHHHHHH--HhCCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-----chh
Confidence 356655443222 2232 5699999998532 234 7799977643 24789999999999999643 233
Q ss_pred HHHHHcCceeEecCCCCCHHHHHHHHHHHhcC
Q psy10186 89 RHIVDLGAGVELSYFNITLESIAWATSIVLNN 120 (124)
Q Consensus 89 ~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~ 120 (124)
...+..+.+..+. -+.+++.++++++++|
T Consensus 107 ~~~~~~~~~~~~~---~~~~~l~~~i~~l~~d 135 (135)
T PF13692_consen 107 GIVEEDGCGVLVA---NDPEELAEAIERLLND 135 (135)
T ss_dssp CHS---SEEEE-T---T-HHHHHHHHHHHHH-
T ss_pred hheeecCCeEEEC---CCHHHHHHHHHHHhcC
Confidence 3444467776662 2799999999999875
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding
Back Show alignment and domain information
Probab=97.89 E-value=0.00016 Score=52.14 Aligned_cols=84 Identities=23% Similarity=0.250 Sum_probs=61.0
Q ss_pred CCCcEEEeeccChH-HhhcCCCcceEEecC----ChhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecCCCCC
Q psy10186 32 LPGNVHIRKWIPQQ-DVLAHPNCRLFISHG----GVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNIT 106 (124)
Q Consensus 32 ~~~~v~~~~~~~~~-~~l~~~~~d~~i~~g----G~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~ 106 (124)
.+.++.+.++.+.. .++ ..+|++|..+ ...+++||+++|+|+|+..... .....+.+...|..+.+ .+
T Consensus 259 ~~~~v~~~g~~~~~~~~~--~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~---g~~~~v~~~~~G~lv~~--~d 331 (372)
T cd04949 259 LEDYVFLKGYTRDLDEVY--QKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNY---GPSEIIEDGENGYLVPK--GD 331 (372)
T ss_pred CcceEEEcCCCCCHHHHH--hhhhEEEecccccccChHHHHHHhCCCCEEEecCCC---CcHHHcccCCCceEeCC--Cc
Confidence 45678888866543 345 7899987665 2468999999999999963221 24455666678888863 36
Q ss_pred HHHHHHHHHHHhcCCC
Q psy10186 107 LESIAWATSIVLNNPR 122 (124)
Q Consensus 107 ~~~l~~~l~~ll~~~~ 122 (124)
.+++.++|.+++.++.
T Consensus 332 ~~~la~~i~~ll~~~~ 347 (372)
T cd04949 332 IEALAEAIIELLNDPK 347 (372)
T ss_pred HHHHHHHHHHHHcCHH
Confidence 8999999999998864
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing
Back Show alignment and domain information
Probab=97.88 E-value=0.00021 Score=52.22 Aligned_cols=106 Identities=18% Similarity=0.232 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHhhCCCeEEEEEcCCCC---------CC---CCCcEEEeeccChHHhhcC-CCcceEEecCChhhHHHHH
Q psy10186 3 DGMRTLLVTAFSRTGLTVLWRYEGDSI---------EN---LPGNVHIRKWIPQQDVLAH-PNCRLFISHGGVNSALEAI 69 (124)
Q Consensus 3 ~~~~~~~~~~l~~~~~~~i~~~g~~~~---------~~---~~~~v~~~~~~~~~~~l~~-~~~d~~i~~gG~~t~~ea~ 69 (124)
.+.+.++++++.+.+.+++++...... .+ ..+++.+.+.++..+++.. ..|+++|+-++.+. .||.
T Consensus 219 ~~~l~~li~~L~~~~~~~~vi~P~~~p~~~~i~~~i~~~~~~~~~v~l~~~l~~~~~l~Ll~~a~~vitdSSggi-~EA~ 297 (365)
T TIGR03568 219 EEQIKELLKALDELNKNYIFTYPNADAGSRIINEAIEEYVNEHPNFRLFKSLGQERYLSLLKNADAVIGNSSSGI-IEAP 297 (365)
T ss_pred hHHHHHHHHHHHHhccCCEEEEeCCCCCchHHHHHHHHHhcCCCCEEEECCCChHHHHHHHHhCCEEEEcChhHH-Hhhh
Confidence 456888999998876555555432211 00 1468999988776664333 88999999997765 9999
Q ss_pred HhCCCeeeecccccHHHHHHHHHHcCce-eEecCCCCCHHHHHHHHHHHhc
Q psy10186 70 HYGIPIIGVPFYGDQLSHVRHIVDLGAG-VELSYFNITLESIAWATSIVLN 119 (124)
Q Consensus 70 ~~g~P~l~~P~~~~q~~~a~~~~~~g~g-~~~~~~~~~~~~l~~~l~~ll~ 119 (124)
+.|+|+|.+- +.. + ..+.|.. +.+. .+.+++.++++++++
T Consensus 298 ~lg~Pvv~l~---~R~---e-~~~~g~nvl~vg---~~~~~I~~a~~~~~~ 338 (365)
T TIGR03568 298 SFGVPTINIG---TRQ---K-GRLRADSVIDVD---PDKEEIVKAIEKLLD 338 (365)
T ss_pred hcCCCEEeec---CCc---h-hhhhcCeEEEeC---CCHHHHHHHHHHHhC
Confidence 9999999873 211 1 1122333 3343 368889999988543
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
>TIGR02918 accessory Sec system glycosylation protein GtfA
Back Show alignment and domain information
Probab=97.87 E-value=0.0002 Score=54.38 Aligned_cols=83 Identities=19% Similarity=0.252 Sum_probs=62.1
Q ss_pred CCCcEEEeeccChHHhhcCCCcceEEecC---C-hhhHHHHHHhCCCeeeecccccHH-HHHHHHHHcCceeEecCC--C
Q psy10186 32 LPGNVHIRKWIPQQDVLAHPNCRLFISHG---G-VNSALEAIHYGIPIIGVPFYGDQL-SHVRHIVDLGAGVELSYF--N 104 (124)
Q Consensus 32 ~~~~v~~~~~~~~~~~l~~~~~d~~i~~g---G-~~t~~ea~~~g~P~l~~P~~~~q~-~~a~~~~~~g~g~~~~~~--~ 104 (124)
..+++.+.++.+..+++ ..+|+++..+ | ..+++||+++|+|+|.. +-. ...+.+++...|..+... .
T Consensus 374 l~~~V~f~G~~~~~~~~--~~adv~v~pS~~Egfgl~~lEAma~G~PVI~~----dv~~G~~eiI~~g~nG~lv~~~~~~ 447 (500)
T TIGR02918 374 AQDYIHLKGHRNLSEVY--KDYELYLSASTSEGFGLTLMEAVGSGLGMIGF----DVNYGNPTFIEDNKNGYLIPIDEEE 447 (500)
T ss_pred CCCeEEEcCCCCHHHHH--HhCCEEEEcCccccccHHHHHHHHhCCCEEEe----cCCCCCHHHccCCCCEEEEeCCccc
Confidence 35678999998888888 7899998766 2 47899999999999996 332 355666666788888632 1
Q ss_pred CC----HHHHHHHHHHHhcC
Q psy10186 105 IT----LESIAWATSIVLNN 120 (124)
Q Consensus 105 ~~----~~~l~~~l~~ll~~ 120 (124)
-+ .++++++|.+++++
T Consensus 448 ~d~~~~~~~la~~I~~ll~~ 467 (500)
T TIGR02918 448 DDEDQIITALAEKIVEYFNS 467 (500)
T ss_pred cchhHHHHHHHHHHHHHhCh
Confidence 22 77899999988843
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases
Back Show alignment and domain information
Probab=97.85 E-value=5.3e-05 Score=54.00 Aligned_cols=106 Identities=22% Similarity=0.222 Sum_probs=65.7
Q ss_pred HHHHHHHHhhC--CCeEEEEEcCCCC----------CCCCCcEEEeeccChHHhhcC-CCcceEEecCCh-----hhHHH
Q psy10186 6 RTLLVTAFSRT--GLTVLWRYEGDSI----------ENLPGNVHIRKWIPQQDVLAH-PNCRLFISHGGV-----NSALE 67 (124)
Q Consensus 6 ~~~~~~~l~~~--~~~~i~~~g~~~~----------~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~~gG~-----~t~~e 67 (124)
+..+++++... +.+++++.+.... ....+++.+.+++++.++... ..+|+++.++-. .+++|
T Consensus 208 ~~~li~a~~~l~~~~~l~ivG~~~~~~~~~~~~~~~~~~~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~~~e~~~~~~~E 287 (363)
T cd04955 208 IDDLIEAFSKSNSGKKLVIVGNADHNTPYGKLLKEKAAADPRIIFVGPIYDQELLELLRYAALFYLHGHSVGGTNPSLLE 287 (363)
T ss_pred HHHHHHHHHhhccCceEEEEcCCCCcchHHHHHHHHhCCCCcEEEccccChHHHHHHHHhCCEEEeCCccCCCCChHHHH
Confidence 44556666554 3677655543211 124578999999988764332 678888776533 57999
Q ss_pred HHHhCCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCC
Q psy10186 68 AIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNP 121 (124)
Q Consensus 68 a~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~ 121 (124)
|+++|+|+|+..... +.+.+.+ .|..+... +.+.+++.++++++
T Consensus 288 Ama~G~PvI~s~~~~----~~e~~~~--~g~~~~~~----~~l~~~i~~l~~~~ 331 (363)
T cd04955 288 AMAYGCPVLASDNPF----NREVLGD--KAIYFKVG----DDLASLLEELEADP 331 (363)
T ss_pred HHHcCCCEEEecCCc----cceeecC--CeeEecCc----hHHHHHHHHHHhCH
Confidence 999999999864332 1222222 34444422 22888888888765
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases
Back Show alignment and domain information
Probab=97.78 E-value=0.00019 Score=53.21 Aligned_cols=83 Identities=18% Similarity=0.107 Sum_probs=58.9
Q ss_pred CCCcEEEeeccChHHhhcC-CCcceEEecC---C-hhhHHHHHHhCCCeeeecccccHHHHHHHHH---HcCceeEecCC
Q psy10186 32 LPGNVHIRKWIPQQDVLAH-PNCRLFISHG---G-VNSALEAIHYGIPIIGVPFYGDQLSHVRHIV---DLGAGVELSYF 103 (124)
Q Consensus 32 ~~~~v~~~~~~~~~~~l~~-~~~d~~i~~g---G-~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~---~~g~g~~~~~~ 103 (124)
..++|.+.+++|..++... ..+|++++.. | ..+++|||++|+|+|+....+. ....++ +...|....
T Consensus 303 l~~~V~f~g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp---~~~iv~~~~~g~~G~l~~-- 377 (419)
T cd03806 303 LEDKVEFVVNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGP---LLDIVVPWDGGPTGFLAS-- 377 (419)
T ss_pred CCCeEEEecCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHcCCcEEEEcCCCC---chheeeccCCCCceEEeC--
Confidence 3568999999987764333 8899988654 1 3588999999999998632221 112222 345777764
Q ss_pred CCCHHHHHHHHHHHhcCC
Q psy10186 104 NITLESIAWATSIVLNNP 121 (124)
Q Consensus 104 ~~~~~~l~~~l~~ll~~~ 121 (124)
+.+++.+++.++++++
T Consensus 378 --d~~~la~ai~~ll~~~ 393 (419)
T cd03806 378 --TAEEYAEAIEKILSLS 393 (419)
T ss_pred --CHHHHHHHHHHHHhCC
Confidence 7999999999999865
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5
Back Show alignment and domain information
Probab=97.73 E-value=0.0001 Score=53.57 Aligned_cols=108 Identities=17% Similarity=0.240 Sum_probs=65.9
Q ss_pred HHHHHHHHHHhhC-CCeEEEEEcCCC---------CCCCCCcEEEeeccChHHhhcC-CCcceEEecCChhhHHHHHHhC
Q psy10186 4 GMRTLLVTAFSRT-GLTVLWRYEGDS---------IENLPGNVHIRKWIPQQDVLAH-PNCRLFISHGGVNSALEAIHYG 72 (124)
Q Consensus 4 ~~~~~~~~~l~~~-~~~~i~~~g~~~---------~~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~~gG~~t~~ea~~~g 72 (124)
..+.++++++.+. ++++||.+.+++ .... +++++++.+++.+.+.. ..|+++|+.+| |-.-||.++|
T Consensus 200 ~~i~~~l~~L~~~~~~~vi~~~hn~p~~~~~i~~~l~~~-~~v~~~~~l~~~~~l~ll~~a~~vvgdSs-GI~eEa~~lg 277 (346)
T PF02350_consen 200 EQILEALKALAERQNVPVIFPLHNNPRGSDIIIEKLKKY-DNVRLIEPLGYEEYLSLLKNADLVVGDSS-GIQEEAPSLG 277 (346)
T ss_dssp HHHHHHHHHHHHHTTEEEEEE--S-HHHHHHHHHHHTT--TTEEEE----HHHHHHHHHHESEEEESSH-HHHHHGGGGT
T ss_pred HHHHHHHHHHHhcCCCcEEEEecCCchHHHHHHHHhccc-CCEEEECCCCHHHHHHHHhcceEEEEcCc-cHHHHHHHhC
Confidence 3455666666665 789999998543 2234 59999888776553332 78999999999 5444999999
Q ss_pred CCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcC
Q psy10186 73 IPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNN 120 (124)
Q Consensus 73 ~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~ 120 (124)
+|+|.+=..++... ....|..+.+. .+.+++.+++++.+.+
T Consensus 278 ~P~v~iR~~geRqe----~r~~~~nvlv~---~~~~~I~~ai~~~l~~ 318 (346)
T PF02350_consen 278 KPVVNIRDSGERQE----GRERGSNVLVG---TDPEAIIQAIEKALSD 318 (346)
T ss_dssp --EEECSSS-S-HH----HHHTTSEEEET---SSHHHHHHHHHHHHH-
T ss_pred CeEEEecCCCCCHH----HHhhcceEEeC---CCHHHHHHHHHHHHhC
Confidence 99999833333322 22335555554 4799999999998865
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A
Back Show alignment and domain information
Probab=97.71 E-value=0.00012 Score=55.06 Aligned_cols=114 Identities=14% Similarity=0.155 Sum_probs=64.9
Q ss_pred CHHHHHHHHHHHhhCCCeEEEEEcCCCC------------CCCCCcEEEeeccChHHhh-cCCCcceEEec---CChhhH
Q psy10186 2 SDGMRTLLVTAFSRTGLTVLWRYEGDSI------------ENLPGNVHIRKWIPQQDVL-AHPNCRLFISH---GGVNSA 65 (124)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~i~~~g~~~~------------~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~~---gG~~t~ 65 (124)
+++.+..-++-|++.|...+|....... .-.++.+.+.+..+..+-+ .+..+|+++.. +|..|.
T Consensus 298 ~p~~l~~W~~IL~~vP~S~L~L~~~~~~~~~~l~~~~~~~Gv~~~Ri~f~~~~~~~ehl~~~~~~DI~LDT~p~nG~TTt 377 (468)
T PF13844_consen 298 SPETLDLWARILKAVPNSRLWLLRFPASGEARLRRRFAAHGVDPDRIIFSPVAPREEHLRRYQLADICLDTFPYNGGTTT 377 (468)
T ss_dssp -HHHHHHHHHHHHHSTTEEEEEEETSTTHHHHHHHHHHHTTS-GGGEEEEE---HHHHHHHGGG-SEEE--SSS--SHHH
T ss_pred CHHHHHHHHHHHHhCCCcEEEEeeCCHHHHHHHHHHHHHcCCChhhEEEcCCCCHHHHHHHhhhCCEEeeCCCCCCcHHH
Confidence 5667777788888889888887654321 1135678888887765543 23779998754 488899
Q ss_pred HHHHHhCCCeeeecccc-cHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHh
Q psy10186 66 LEAIHYGIPIIGVPFYG-DQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVL 118 (124)
Q Consensus 66 ~ea~~~g~P~l~~P~~~-~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll 118 (124)
+||+.+|+|+|..|-.. -...-+..+..+|+...+-. +.++..+.-.++.
T Consensus 378 ~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~ElIA~---s~~eYv~~Av~La 428 (468)
T PF13844_consen 378 LDALWMGVPVVTLPGETMASRVGASILRALGLPELIAD---SEEEYVEIAVRLA 428 (468)
T ss_dssp HHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGGB-S---SHHHHHHHHHHHH
T ss_pred HHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchhcCC---CHHHHHHHHHHHh
Confidence 99999999999997532 34555667788888866643 3444443333333
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds
Back Show alignment and domain information
Probab=97.71 E-value=0.0011 Score=48.40 Aligned_cols=95 Identities=16% Similarity=0.007 Sum_probs=60.4
Q ss_pred CCeEEEEEcC-CC--CC--CCCCcEEEeeccChHHhhcC-CCcceEEecC--------C-hhhHHHHHHhCCCeeeeccc
Q psy10186 17 GLTVLWRYEG-DS--IE--NLPGNVHIRKWIPQQDVLAH-PNCRLFISHG--------G-VNSALEAIHYGIPIIGVPFY 81 (124)
Q Consensus 17 ~~~~i~~~g~-~~--~~--~~~~~v~~~~~~~~~~~l~~-~~~d~~i~~g--------G-~~t~~ea~~~g~P~l~~P~~ 81 (124)
+++|+++.+. .. .. ...+|+++.+++|..++-.+ ..+|+++..- + ...++|++++|+|+|..+.
T Consensus 232 ~~~~vliG~~~~~~~~~~~~~~~nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~- 310 (373)
T cd04950 232 DWSFVLIGPVDVSIDPSALLRLPNVHYLGPKPYKELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPL- 310 (373)
T ss_pred CCEEEEECCCcCccChhHhccCCCEEEeCCCCHHHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCCCEEecCc-
Confidence 4677665543 11 11 12479999999997775433 7899977542 2 2468999999999998642
Q ss_pred ccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCC
Q psy10186 82 GDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNP 121 (124)
Q Consensus 82 ~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~ 121 (124)
....+..+.+.... + +.+++.++|++.+.++
T Consensus 311 ------~~~~~~~~~~~~~~--~-d~~~~~~ai~~~l~~~ 341 (373)
T cd04950 311 ------PEVRRYEDEVVLIA--D-DPEEFVAAIEKALLED 341 (373)
T ss_pred ------HHHHhhcCcEEEeC--C-CHHHHHHHHHHHHhcC
Confidence 12222223233332 1 7999999999976443
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type
Back Show alignment and domain information
Probab=97.62 E-value=0.00017 Score=54.09 Aligned_cols=102 Identities=20% Similarity=0.176 Sum_probs=65.3
Q ss_pred HHHHhhCCCeEEEEEcCCC-C--------CCCCCcEEEeeccChHH---hhcCCCcceEEecC---C-hhhHHHHHHhCC
Q psy10186 10 VTAFSRTGLTVLWRYEGDS-I--------ENLPGNVHIRKWIPQQD---VLAHPNCRLFISHG---G-VNSALEAIHYGI 73 (124)
Q Consensus 10 ~~~l~~~~~~~i~~~g~~~-~--------~~~~~~v~~~~~~~~~~---~l~~~~~d~~i~~g---G-~~t~~ea~~~g~ 73 (124)
++.+.+.+.+++++.+++. . .+.+.++.+...++... ++ ..+|+++..+ | ..+.+||+++|+
T Consensus 313 ~~~l~~~~~~lvi~G~g~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~--~~aDv~l~pS~~E~~gl~~lEAma~G~ 390 (473)
T TIGR02095 313 LPELLELGGQLVVLGTGDPELEEALRELAERYPGNVRVIIGYDEALAHLIY--AGADFILMPSRFEPCGLTQLYAMRYGT 390 (473)
T ss_pred HHHHHHcCcEEEEECCCCHHHHHHHHHHHHHCCCcEEEEEcCCHHHHHHHH--HhCCEEEeCCCcCCcHHHHHHHHHCCC
Confidence 3334344578776654431 1 12455677666556543 44 8899999775 2 358899999999
Q ss_pred CeeeecccccHHHHHHHHHHc------CceeEecCCCCCHHHHHHHHHHHhc
Q psy10186 74 PIIGVPFYGDQLSHVRHIVDL------GAGVELSYFNITLESIAWATSIVLN 119 (124)
Q Consensus 74 P~l~~P~~~~q~~~a~~~~~~------g~g~~~~~~~~~~~~l~~~l~~ll~ 119 (124)
|+|+-.. ....+.+.+. +.|..+.+ .+.+++.+++.+++.
T Consensus 391 pvI~s~~----gg~~e~v~~~~~~~~~~~G~l~~~--~d~~~la~~i~~~l~ 436 (473)
T TIGR02095 391 VPIVRRT----GGLADTVVDGDPEAESGTGFLFEE--YDPGALLAALSRALR 436 (473)
T ss_pred CeEEccC----CCccceEecCCCCCCCCceEEeCC--CCHHHHHHHHHHHHH
Confidence 9998533 2233344443 78888863 357889999888775
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant
Back Show alignment and domain information
Probab=97.62 E-value=0.00014 Score=59.26 Aligned_cols=86 Identities=22% Similarity=0.168 Sum_probs=61.5
Q ss_pred CCCcEEEeeccChHHhhcC-CCc----ceEEecC---C-hhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecC
Q psy10186 32 LPGNVHIRKWIPQQDVLAH-PNC----RLFISHG---G-VNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSY 102 (124)
Q Consensus 32 ~~~~v~~~~~~~~~~~l~~-~~~----d~~i~~g---G-~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~ 102 (124)
..++|.+.+++++.++-.. ..+ |+||..+ | ..+++||+++|+|+|.-. .....+.+.....|+.+.+
T Consensus 546 L~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASd----vGG~~EII~~g~nGlLVdP 621 (1050)
T TIGR02468 546 LYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATK----NGGPVDIHRVLDNGLLVDP 621 (1050)
T ss_pred CCCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeC----CCCcHHHhccCCcEEEECC
Confidence 4567888888876653221 334 6888875 2 368999999999999963 3334455555567888864
Q ss_pred CCCCHHHHHHHHHHHhcCCCC
Q psy10186 103 FNITLESIAWATSIVLNNPRR 123 (124)
Q Consensus 103 ~~~~~~~l~~~l~~ll~~~~~ 123 (124)
.+.++++++|.++++++.+
T Consensus 622 --~D~eaLA~AL~~LL~Dpel 640 (1050)
T TIGR02468 622 --HDQQAIADALLKLVADKQL 640 (1050)
T ss_pred --CCHHHHHHHHHHHhhCHHH
Confidence 3588999999999988753
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length
Back Show alignment and domain information
Probab=97.61 E-value=0.0016 Score=47.24 Aligned_cols=105 Identities=21% Similarity=0.205 Sum_probs=68.5
Q ss_pred HHHHHHHHHHhhCCCeEEEEEcCCCCC----CCCCcEEE-eeccChHHhhcCCCcceEEecCChhhHHHHHHhCCCeeee
Q psy10186 4 GMRTLLVTAFSRTGLTVLWRYEGDSIE----NLPGNVHI-RKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGV 78 (124)
Q Consensus 4 ~~~~~~~~~l~~~~~~~i~~~g~~~~~----~~~~~v~~-~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~g~P~l~~ 78 (124)
+.+.++++.|++.+.. ++...+.... +..+ +.+ ...++..+++ ..||++|+-||. ...||+..|+|+|.+
T Consensus 199 ~i~~~ii~~L~~~~~~-vV~ipr~~~~~~~~~~~~-~~i~~~~vd~~~Ll--~~a~l~Ig~ggT-Ma~EAA~LGtPaIs~ 273 (335)
T PF04007_consen 199 SILPEIIEELEKYGRN-VVIIPRYEDQRELFEKYG-VIIPPEPVDGLDLL--YYADLVIGGGGT-MAREAALLGTPAISC 273 (335)
T ss_pred chHHHHHHHHHhhCce-EEEecCCcchhhHHhccC-ccccCCCCCHHHHH--HhcCEEEeCCcH-HHHHHHHhCCCEEEe
Confidence 4567888999888877 4444433211 1112 333 3445556788 669999999885 688999999999986
Q ss_pred cccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHh
Q psy10186 79 PFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVL 118 (124)
Q Consensus 79 P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll 118 (124)
..++-...-+.+.+.|+-.... +.+++.+.+++..
T Consensus 274 -~~g~~~~vd~~L~~~Gll~~~~----~~~ei~~~v~~~~ 308 (335)
T PF04007_consen 274 -FPGKLLAVDKYLIEKGLLYHST----DPDEIVEYVRKNL 308 (335)
T ss_pred -cCCcchhHHHHHHHCCCeEecC----CHHHHHHHHHHhh
Confidence 2233334456677777744444 6777777776655
They are found in archaea and some bacteria and have no known function.
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds
Back Show alignment and domain information
Probab=97.59 E-value=0.00034 Score=46.24 Aligned_cols=65 Identities=20% Similarity=0.235 Sum_probs=45.6
Q ss_pred CCeEEEEEcCCCC---------CCCCCcEEEeeccChHH---hhcCCCcceEEecCC----hhhHHHHHHhCCCeeeecc
Q psy10186 17 GLTVLWRYEGDSI---------ENLPGNVHIRKWIPQQD---VLAHPNCRLFISHGG----VNSALEAIHYGIPIIGVPF 80 (124)
Q Consensus 17 ~~~~i~~~g~~~~---------~~~~~~v~~~~~~~~~~---~l~~~~~d~~i~~gG----~~t~~ea~~~g~P~l~~P~ 80 (124)
+.+++++.+.... .....|+.+.++++..+ .+. ..||++++... .++++||+++|+|+|+.+.
T Consensus 135 ~~~~~i~G~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~di~l~~~~~e~~~~~~~Eam~~g~pvi~s~~ 213 (229)
T cd01635 135 DLKLVIAGDGPEREYLEELLAALLLLDRVIFLGGLDPEELLALLL-AAADVFVLPSLREGFGLVVLEAMACGLPVIATDV 213 (229)
T ss_pred CeEEEEEeCCCChHHHHHHHHhcCCcccEEEeCCCCcHHHHHHHh-hcCCEEEecccccCcChHHHHHHhCCCCEEEcCC
Confidence 4677666555431 13467899999863322 231 55999999886 6899999999999999755
Q ss_pred cc
Q psy10186 81 YG 82 (124)
Q Consensus 81 ~~ 82 (124)
..
T Consensus 214 ~~ 215 (229)
T cd01635 214 GG 215 (229)
T ss_pred CC
Confidence 43
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
>PRK14089 ipid-A-disaccharide synthase; Provisional
Back Show alignment and domain information
Probab=97.56 E-value=6.4e-05 Score=54.62 Aligned_cols=71 Identities=15% Similarity=0.105 Sum_probs=54.4
Q ss_pred ChHHhhcCCCcceEEecCChhhHHHHHHhCCCeeee-cccccHHHHHHHHH---HcCceeEe-------------cCCCC
Q psy10186 43 PQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGV-PFYGDQLSHVRHIV---DLGAGVEL-------------SYFNI 105 (124)
Q Consensus 43 ~~~~~l~~~~~d~~i~~gG~~t~~ea~~~g~P~l~~-P~~~~q~~~a~~~~---~~g~g~~~-------------~~~~~ 105 (124)
+..+++ ..||++|+.+|..|+ |++.+|+|+++. ....-|..||+++. ..|+.-++ -.+++
T Consensus 228 ~~~~~m--~~aDlal~~SGT~TL-E~al~g~P~Vv~Yk~~~lty~iak~lv~~~~igL~Nii~~~~~~~~vvPEllQ~~~ 304 (347)
T PRK14089 228 DTHKAL--LEAEFAFICSGTATL-EAALIGTPFVLAYKAKAIDYFIAKMFVKLKHIGLANIFFDFLGKEPLHPELLQEFV 304 (347)
T ss_pred cHHHHH--HhhhHHHhcCcHHHH-HHHHhCCCEEEEEeCCHHHHHHHHHHHcCCeeehHHHhcCCCcccccCchhhcccC
Confidence 445566 789999999999888 999999999994 22357899999998 45655333 23567
Q ss_pred CHHHHHHHHHH
Q psy10186 106 TLESIAWATSI 116 (124)
Q Consensus 106 ~~~~l~~~l~~ 116 (124)
+.+.+.+.+.+
T Consensus 305 t~~~la~~i~~ 315 (347)
T PRK14089 305 TVENLLKAYKE 315 (347)
T ss_pred CHHHHHHHHHH
Confidence 88888888765
>PLN02846 digalactosyldiacylglycerol synthase
Back Show alignment and domain information
Probab=97.54 E-value=0.00073 Score=50.91 Aligned_cols=73 Identities=11% Similarity=0.102 Sum_probs=53.6
Q ss_pred EeeccChHHhhcCCCcceEEecCC----hhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHH
Q psy10186 38 IRKWIPQQDVLAHPNCRLFISHGG----VNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWA 113 (124)
Q Consensus 38 ~~~~~~~~~~l~~~~~d~~i~~gG----~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~ 113 (124)
+.++.+..+++ ..+|+|+..+- ..+++||+++|+|+|..-.. .+ +.+.+.+.|.... +.+++.++
T Consensus 288 f~G~~~~~~~~--~~~DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~----~~-~~v~~~~ng~~~~----~~~~~a~a 356 (462)
T PLN02846 288 YPGRDHADPLF--HDYKVFLNPSTTDVVCTTTAEALAMGKIVVCANHP----SN-EFFKQFPNCRTYD----DGKGFVRA 356 (462)
T ss_pred ECCCCCHHHHH--HhCCEEEECCCcccchHHHHHHHHcCCcEEEecCC----Cc-ceeecCCceEecC----CHHHHHHH
Confidence 55666666677 77899998863 46889999999999997332 22 5555566666664 68899999
Q ss_pred HHHHhcCC
Q psy10186 114 TSIVLNNP 121 (124)
Q Consensus 114 l~~ll~~~ 121 (124)
+.+++.++
T Consensus 357 i~~~l~~~ 364 (462)
T PLN02846 357 TLKALAEE 364 (462)
T ss_pred HHHHHccC
Confidence 99988754
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Back Show alignment and domain information
Probab=97.47 E-value=0.0011 Score=50.95 Aligned_cols=93 Identities=15% Similarity=0.124 Sum_probs=60.7
Q ss_pred HHHHHHHHHhhC-CCeEEEEEcCCCC---------CCCCCcEEEeeccChH-HhhcCCCcceEEecC---C-hhhHHHHH
Q psy10186 5 MRTLLVTAFSRT-GLTVLWRYEGDSI---------ENLPGNVHIRKWIPQQ-DVLAHPNCRLFISHG---G-VNSALEAI 69 (124)
Q Consensus 5 ~~~~~~~~l~~~-~~~~i~~~g~~~~---------~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~g---G-~~t~~ea~ 69 (124)
.+..+.+.+... +++++++.++... .+..+++.+.++.+.. +++ ..+|+++..+ | .++++||+
T Consensus 416 LI~A~a~llk~~pdirLvIVGdG~~~eeLk~la~elgL~d~V~FlG~~~Dv~~~L--aaADVfVlPS~~EGfp~vlLEAM 493 (578)
T PRK15490 416 WIDFAARYLQHHPATRFVLVGDGDLRAEAQKRAEQLGILERILFVGASRDVGYWL--QKMNVFILFSRYEGLPNVLIEAQ 493 (578)
T ss_pred HHHHHHHHHhHCCCeEEEEEeCchhHHHHHHHHHHcCCCCcEEECCChhhHHHHH--HhCCEEEEcccccCccHHHHHHH
Confidence 344444444444 4566665443221 1245789999986543 344 7899998753 3 56899999
Q ss_pred HhCCCeeeecccccHHHHHHHHHHcCceeEecCC
Q psy10186 70 HYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYF 103 (124)
Q Consensus 70 ~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~ 103 (124)
++|+|+|.. +-..+.+.+.+...|..+.+.
T Consensus 494 A~GlPVVAT----dvGG~~EiV~dG~nG~LVp~~ 523 (578)
T PRK15490 494 MVGVPVIST----PAGGSAECFIEGVSGFILDDA 523 (578)
T ss_pred HhCCCEEEe----CCCCcHHHcccCCcEEEECCC
Confidence 999999985 334556667777788888654
>PLN02501 digalactosyldiacylglycerol synthase
Back Show alignment and domain information
Probab=97.47 E-value=0.0014 Score=51.64 Aligned_cols=77 Identities=17% Similarity=0.171 Sum_probs=54.3
Q ss_pred cEEEeeccChHH-hhcCCCcceEEecCC----hhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHH
Q psy10186 35 NVHIRKWIPQQD-VLAHPNCRLFISHGG----VNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLES 109 (124)
Q Consensus 35 ~v~~~~~~~~~~-~l~~~~~d~~i~~gG----~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~ 109 (124)
++.+.++.+... ++ ..+|+||..+- ..+++||+++|+|+|.....+.. .+.+.+.|.... +.++
T Consensus 602 ~V~FLG~~dd~~~ly--asaDVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~e-----~V~~g~nGll~~----D~Ea 670 (794)
T PLN02501 602 NLNFLKGRDHADDSL--HGYKVFINPSISDVLCTATAEALAMGKFVVCADHPSNE-----FFRSFPNCLTYK----TSED 670 (794)
T ss_pred EEEecCCCCCHHHHH--HhCCEEEECCCcccchHHHHHHHHcCCCEEEecCCCCc-----eEeecCCeEecC----CHHH
Confidence 466777776553 66 78999988762 46889999999999997444321 122334444332 6899
Q ss_pred HHHHHHHHhcCCC
Q psy10186 110 IAWATSIVLNNPR 122 (124)
Q Consensus 110 l~~~l~~ll~~~~ 122 (124)
+.+++.+++.++.
T Consensus 671 fAeAI~~LLsd~~ 683 (794)
T PLN02501 671 FVAKVKEALANEP 683 (794)
T ss_pred HHHHHHHHHhCch
Confidence 9999999998764
>TIGR02470 sucr_synth sucrose synthase
Back Show alignment and domain information
Probab=97.42 E-value=0.00096 Score=53.15 Aligned_cols=81 Identities=16% Similarity=0.127 Sum_probs=57.4
Q ss_pred CCCcEEEeecc-Ch---HHhhcC--CCcceEEecC----ChhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEec
Q psy10186 32 LPGNVHIRKWI-PQ---QDVLAH--PNCRLFISHG----GVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELS 101 (124)
Q Consensus 32 ~~~~v~~~~~~-~~---~~~l~~--~~~d~~i~~g----G~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~ 101 (124)
..+++.+.++. +. .+++.+ ..+|+|+..+ -..+++||+++|+|+|+- +.....+.+.+...|..+.
T Consensus 617 L~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT----~~GG~~EiV~dg~tGfLVd 692 (784)
T TIGR02470 617 LHGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFAT----RFGGPLEIIQDGVSGFHID 692 (784)
T ss_pred CCCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEc----CCCCHHHHhcCCCcEEEeC
Confidence 34678888864 32 234421 3467888776 246899999999999994 5556777777777899886
Q ss_pred CCCCCHHHHHHHHHHHh
Q psy10186 102 YFNITLESIAWATSIVL 118 (124)
Q Consensus 102 ~~~~~~~~l~~~l~~ll 118 (124)
+. +.+++.+++.+++
T Consensus 693 p~--D~eaLA~aL~~ll 707 (784)
T TIGR02470 693 PY--HGEEAAEKIVDFF 707 (784)
T ss_pred CC--CHHHHHHHHHHHH
Confidence 43 5788888888765
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Back Show alignment and domain information
Probab=97.40 E-value=0.0015 Score=47.01 Aligned_cols=93 Identities=14% Similarity=0.237 Sum_probs=62.5
Q ss_pred CCeEEEEEcCCC-CCCCCCcEEEeeccChHHhhcC-CCcceEEecCC--------------hhhHHHHHHhCCCeeeecc
Q psy10186 17 GLTVLWRYEGDS-IENLPGNVHIRKWIPQQDVLAH-PNCRLFISHGG--------------VNSALEAIHYGIPIIGVPF 80 (124)
Q Consensus 17 ~~~~i~~~g~~~-~~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~~gG--------------~~t~~ea~~~g~P~l~~P~ 80 (124)
+.++++ +|... .....+|+.+.+|++..++..+ ...-+++.-+- .+-+.+.+++|+|+|+.
T Consensus 190 ~~~l~i-~G~g~~~~~~~~~V~f~G~~~~eel~~~l~~~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~-- 266 (333)
T PRK09814 190 GIKLTV-FGPNPEDLENSANISYKGWFDPEELPNELSKGFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVW-- 266 (333)
T ss_pred CCeEEE-ECCCccccccCCCeEEecCCCHHHHHHHHhcCcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEEC--
Confidence 456544 44433 2245679999999998876432 33112222210 12367789999999995
Q ss_pred cccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHh
Q psy10186 81 YGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVL 118 (124)
Q Consensus 81 ~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll 118 (124)
+....++.+++.++|..+. +.+++.+.+.++.
T Consensus 267 --~~~~~~~~V~~~~~G~~v~----~~~el~~~l~~~~ 298 (333)
T PRK09814 267 --SKAAIADFIVENGLGFVVD----SLEELPEIIDNIT 298 (333)
T ss_pred --CCccHHHHHHhCCceEEeC----CHHHHHHHHHhcC
Confidence 5677889999999999997 5678888887653
>PRK10125 putative glycosyl transferase; Provisional
Back Show alignment and domain information
Probab=97.34 E-value=0.0015 Score=48.46 Aligned_cols=98 Identities=17% Similarity=0.107 Sum_probs=60.2
Q ss_pred HHHHHHHHhhCCCe-EEEEEcCCCCCCCCCcEEEeeccC-h---HHhhcCCCcceEEecCC----hhhHHHHHHhCCCee
Q psy10186 6 RTLLVTAFSRTGLT-VLWRYEGDSIENLPGNVHIRKWIP-Q---QDVLAHPNCRLFISHGG----VNSALEAIHYGIPII 76 (124)
Q Consensus 6 ~~~~~~~l~~~~~~-~i~~~g~~~~~~~~~~v~~~~~~~-~---~~~l~~~~~d~~i~~gG----~~t~~ea~~~g~P~l 76 (124)
+..+++++...+.+ -++++|..+. ....++...++.. . .+++ ..+|++|..+- ..+++||+++|+|+|
T Consensus 258 ~~~li~A~~~l~~~~~L~ivG~g~~-~~~~~v~~~g~~~~~~~l~~~y--~~aDvfV~pS~~Egfp~vilEAmA~G~PVV 334 (405)
T PRK10125 258 DQQLVREMMALGDKIELHTFGKFSP-FTAGNVVNHGFETDKRKLMSAL--NQMDALVFSSRVDNYPLILCEALSIGVPVI 334 (405)
T ss_pred HHHHHHHHHhCCCCeEEEEEcCCCc-ccccceEEecCcCCHHHHHHHH--HhCCEEEECCccccCcCHHHHHHHcCCCEE
Confidence 45677777765432 2345554322 2345677777763 2 2334 77999998763 468999999999999
Q ss_pred eecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHH
Q psy10186 77 GVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWA 113 (124)
Q Consensus 77 ~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~ 113 (124)
.....+ ..+.+. .+.|..+.+. +.++|++.
T Consensus 335 at~~gG----~~Eiv~-~~~G~lv~~~--d~~~La~~ 364 (405)
T PRK10125 335 ATHSDA----AREVLQ-KSGGKTVSEE--EVLQLAQL 364 (405)
T ss_pred EeCCCC----hHHhEe-CCcEEEECCC--CHHHHHhc
Confidence 974433 333333 3578888654 34555543
>PHA01633 putative glycosyl transferase group 1
Back Show alignment and domain information
Probab=97.28 E-value=0.0008 Score=48.74 Aligned_cols=86 Identities=22% Similarity=0.293 Sum_probs=54.8
Q ss_pred CCCcEEEee---ccChHHhhcC-CCcceEEecC---C-hhhHHHHHHhCCCeeeeccc------ccH------HHHHHHH
Q psy10186 32 LPGNVHIRK---WIPQQDVLAH-PNCRLFISHG---G-VNSALEAIHYGIPIIGVPFY------GDQ------LSHVRHI 91 (124)
Q Consensus 32 ~~~~v~~~~---~~~~~~~l~~-~~~d~~i~~g---G-~~t~~ea~~~g~P~l~~P~~------~~q------~~~a~~~ 91 (124)
.++++.+.+ +.+..++... ..+|+++..+ | ..+++||+++|+|+|.--.. +++ ..+....
T Consensus 199 l~~~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~ 278 (335)
T PHA01633 199 VPANVHFVAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEEY 278 (335)
T ss_pred CCCcEEEEecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHHh
Confidence 567888874 4454432221 7899999865 2 46799999999999985221 111 1122222
Q ss_pred H--HcCceeEecCCCCCHHHHHHHHHHHhc
Q psy10186 92 V--DLGAGVELSYFNITLESIAWATSIVLN 119 (124)
Q Consensus 92 ~--~~g~g~~~~~~~~~~~~l~~~l~~ll~ 119 (124)
. +.|.|..+. ..+.+++.+++.+++.
T Consensus 279 ~~~~~g~g~~~~--~~d~~~la~ai~~~~~ 306 (335)
T PHA01633 279 YDKEHGQKWKIH--KFQIEDMANAIILAFE 306 (335)
T ss_pred cCcccCceeeec--CCCHHHHHHHHHHHHh
Confidence 2 235666654 4689999999998843
>PRK14098 glycogen synthase; Provisional
Back Show alignment and domain information
Probab=97.22 E-value=0.0027 Score=48.24 Aligned_cols=103 Identities=16% Similarity=0.191 Sum_probs=64.5
Q ss_pred HHHHhhCCCeEEEEEcCCC-----C----CCCCCcEEEeeccChH---HhhcCCCcceEEecCC----hhhHHHHHHhCC
Q psy10186 10 VTAFSRTGLTVLWRYEGDS-----I----ENLPGNVHIRKWIPQQ---DVLAHPNCRLFISHGG----VNSALEAIHYGI 73 (124)
Q Consensus 10 ~~~l~~~~~~~i~~~g~~~-----~----~~~~~~v~~~~~~~~~---~~l~~~~~d~~i~~gG----~~t~~ea~~~g~ 73 (124)
+..+.+.+.++++...++. + .+.+.++.+.+.++.. .++ +.+|+++..+- ..+.+||+++|+
T Consensus 329 ~~~l~~~~~~lvivG~G~~~~~~~l~~l~~~~~~~V~~~g~~~~~~~~~~~--a~aDi~l~PS~~E~~Gl~~lEAma~G~ 406 (489)
T PRK14098 329 LEKLVELDIQLVICGSGDKEYEKRFQDFAEEHPEQVSVQTEFTDAFFHLAI--AGLDMLLMPGKIESCGMLQMFAMSYGT 406 (489)
T ss_pred HHHHHhcCcEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEEecCHHHHHHHH--HhCCEEEeCCCCCCchHHHHHHHhCCC
Confidence 3334344677766654431 1 1246789888888865 345 88999998762 357899999999
Q ss_pred Ceeeecccc--cHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHh
Q psy10186 74 PIIGVPFYG--DQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVL 118 (124)
Q Consensus 74 P~l~~P~~~--~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll 118 (124)
|.|+....+ |... +..++.+.|..+.+ .+.+++.+++.+++
T Consensus 407 ppVv~~~GGl~d~v~--~~~~~~~~G~l~~~--~d~~~la~ai~~~l 449 (489)
T PRK14098 407 IPVAYAGGGIVETIE--EVSEDKGSGFIFHD--YTPEALVAKLGEAL 449 (489)
T ss_pred CeEEecCCCCceeee--cCCCCCCceeEeCC--CCHHHHHHHHHHHH
Confidence 988764322 2110 01112467877753 35888888888754
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases
Back Show alignment and domain information
Probab=97.20 E-value=0.0013 Score=49.20 Aligned_cols=107 Identities=16% Similarity=0.167 Sum_probs=62.9
Q ss_pred HHHHHhhCCCeEEEEEcCCCC---------CCCCCcEEEeeccChHH---hhcCCCcceEEecC----ChhhHHHHHHhC
Q psy10186 9 LVTAFSRTGLTVLWRYEGDSI---------ENLPGNVHIRKWIPQQD---VLAHPNCRLFISHG----GVNSALEAIHYG 72 (124)
Q Consensus 9 ~~~~l~~~~~~~i~~~g~~~~---------~~~~~~v~~~~~~~~~~---~l~~~~~d~~i~~g----G~~t~~ea~~~g 72 (124)
.++.+.+.+.+++++..++.. ...+.++.+....+... ++ ..+|+++..+ ...+.+||+++|
T Consensus 317 a~~~l~~~~~~lvi~G~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~aDv~l~pS~~E~~gl~~lEAma~G 394 (476)
T cd03791 317 ALPELLELGGQLVILGSGDPEYEEALRELAARYPGRVAVLIGYDEALAHLIY--AGADFFLMPSRFEPCGLTQMYAMRYG 394 (476)
T ss_pred HHHHHHHcCcEEEEEecCCHHHHHHHHHHHHhCCCcEEEEEeCCHHHHHHHH--HhCCEEECCCCCCCCcHHHHHHhhCC
Confidence 334444445777666544320 11356777655444332 34 7899998764 235789999999
Q ss_pred CCeeeecccc--cHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhc
Q psy10186 73 IPIIGVPFYG--DQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLN 119 (124)
Q Consensus 73 ~P~l~~P~~~--~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~ 119 (124)
+|+|+....+ |...+.....+.|.|..+.+. +.+++.+++.++++
T Consensus 395 ~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~--~~~~l~~~i~~~l~ 441 (476)
T cd03791 395 TVPIVRATGGLADTVIDYNEDTGEGTGFVFEGY--NADALLAALRRALA 441 (476)
T ss_pred CCCEECcCCCccceEeCCcCCCCCCCeEEeCCC--CHHHHHHHHHHHHH
Confidence 9999753321 211111111133588888643 57889999888764
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1
Back Show alignment and domain information
Probab=97.15 E-value=0.0023 Score=49.01 Aligned_cols=77 Identities=17% Similarity=0.260 Sum_probs=59.6
Q ss_pred CcEEEeeccChHHhhcC-CCcceEEecC---ChhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHH
Q psy10186 34 GNVHIRKWIPQQDVLAH-PNCRLFISHG---GVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLES 109 (124)
Q Consensus 34 ~~v~~~~~~~~~~~l~~-~~~d~~i~~g---G~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~ 109 (124)
..|.+.++.+..++... ..++++|.-+ |.++.+||+.+|+|+| .......+++..-|.++. +.++
T Consensus 409 ~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~~~ieAiS~GiPqI-------nyg~~~~V~d~~NG~li~----d~~~ 477 (519)
T TIGR03713 409 ERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLYTQISGISAGIPQI-------NKVETDYVEHNKNGYIID----DISE 477 (519)
T ss_pred cEEEEEecCCHHHHHHHHhhheEEEECCCCCChHHHHHHHHcCCCee-------ecCCceeeEcCCCcEEeC----CHHH
Confidence 57788887774332222 7899999877 6779999999999999 233456677777888885 8999
Q ss_pred HHHHHHHHhcCC
Q psy10186 110 IAWATSIVLNNP 121 (124)
Q Consensus 110 l~~~l~~ll~~~ 121 (124)
|.+++..+|.++
T Consensus 478 l~~al~~~L~~~ 489 (519)
T TIGR03713 478 LLKALDYYLDNL 489 (519)
T ss_pred HHHHHHHHHhCH
Confidence 999999999775
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
>PLN00142 sucrose synthase
Back Show alignment and domain information
Probab=97.15 E-value=0.0023 Score=51.26 Aligned_cols=79 Identities=15% Similarity=0.144 Sum_probs=53.1
Q ss_pred CCcEEEeec----cChHHhhcC--CCcceEEecC---C-hhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecC
Q psy10186 33 PGNVHIRKW----IPQQDVLAH--PNCRLFISHG---G-VNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSY 102 (124)
Q Consensus 33 ~~~v~~~~~----~~~~~~l~~--~~~d~~i~~g---G-~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~ 102 (124)
.+++.+.+. .+..+++.. ..+|+|+..+ | ..+++||+++|+|+|.- +.....+.+++...|..+.+
T Consensus 641 ~~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVAT----dvGG~~EIV~dG~tG~LV~P 716 (815)
T PLN00142 641 KGQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT----CQGGPAEIIVDGVSGFHIDP 716 (815)
T ss_pred CCcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEc----CCCCHHHHhcCCCcEEEeCC
Confidence 456777653 333444421 2568888764 2 35899999999999985 44456667777778988875
Q ss_pred CCCCHHHHHHHHHHH
Q psy10186 103 FNITLESIAWATSIV 117 (124)
Q Consensus 103 ~~~~~~~l~~~l~~l 117 (124)
. +.++++++|.++
T Consensus 717 ~--D~eaLA~aI~~l 729 (815)
T PLN00142 717 Y--HGDEAANKIADF 729 (815)
T ss_pred C--CHHHHHHHHHHH
Confidence 3 467777776654
>PLN02949 transferase, transferring glycosyl groups
Back Show alignment and domain information
Probab=97.12 E-value=0.0033 Score=47.46 Aligned_cols=82 Identities=22% Similarity=0.152 Sum_probs=53.9
Q ss_pred CCCcEEEeeccChHHhhcC-CCcceEEecC---C-hhhHHHHHHhCCCeeeecccccHHHHHHHHHH---cCceeEecCC
Q psy10186 32 LPGNVHIRKWIPQQDVLAH-PNCRLFISHG---G-VNSALEAIHYGIPIIGVPFYGDQLSHVRHIVD---LGAGVELSYF 103 (124)
Q Consensus 32 ~~~~v~~~~~~~~~~~l~~-~~~d~~i~~g---G-~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~---~g~g~~~~~~ 103 (124)
..+++.+.++++..++... ..+++++... | ..+++||+++|+|+|.....+-- .+.+.+ ...|....
T Consensus 333 L~~~V~f~g~v~~~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~---~eIV~~~~~g~tG~l~~-- 407 (463)
T PLN02949 333 LDGDVEFHKNVSYRDLVRLLGGAVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPK---MDIVLDEDGQQTGFLAT-- 407 (463)
T ss_pred CCCcEEEeCCCCHHHHHHHHHhCcEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCc---ceeeecCCCCcccccCC--
Confidence 4678999999987664322 7889988543 2 24799999999999997543210 011111 11344443
Q ss_pred CCCHHHHHHHHHHHhcC
Q psy10186 104 NITLESIAWATSIVLNN 120 (124)
Q Consensus 104 ~~~~~~l~~~l~~ll~~ 120 (124)
+.+++++++.+++++
T Consensus 408 --~~~~la~ai~~ll~~ 422 (463)
T PLN02949 408 --TVEEYADAILEVLRM 422 (463)
T ss_pred --CHHHHHHHHHHHHhC
Confidence 788999999999874
>PRK00654 glgA glycogen synthase; Provisional
Back Show alignment and domain information
Probab=97.10 E-value=0.0045 Score=46.59 Aligned_cols=95 Identities=18% Similarity=0.257 Sum_probs=59.2
Q ss_pred CCCeEEEEEcCCC-C--------CCCCCcEEE-eeccChH---HhhcCCCcceEEecC---C-hhhHHHHHHhCCCeeee
Q psy10186 16 TGLTVLWRYEGDS-I--------ENLPGNVHI-RKWIPQQ---DVLAHPNCRLFISHG---G-VNSALEAIHYGIPIIGV 78 (124)
Q Consensus 16 ~~~~~i~~~g~~~-~--------~~~~~~v~~-~~~~~~~---~~l~~~~~d~~i~~g---G-~~t~~ea~~~g~P~l~~ 78 (124)
.+.+++++.+++. . .+.+.++.+ .++ +.. .++ ..+|+++..+ | ..+.+||+++|+|.|+.
T Consensus 310 ~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~g~-~~~~~~~~~--~~aDv~v~PS~~E~~gl~~lEAma~G~p~V~~ 386 (466)
T PRK00654 310 QGGQLVLLGTGDPELEEAFRALAARYPGKVGVQIGY-DEALAHRIY--AGADMFLMPSRFEPCGLTQLYALRYGTLPIVR 386 (466)
T ss_pred cCCEEEEEecCcHHHHHHHHHHHHHCCCcEEEEEeC-CHHHHHHHH--hhCCEEEeCCCCCCchHHHHHHHHCCCCEEEe
Confidence 3678877654431 0 123455553 455 432 344 7899999875 2 35899999999999985
Q ss_pred cccccHHHHHHHHHHc------CceeEecCCCCCHHHHHHHHHHHhc
Q psy10186 79 PFYGDQLSHVRHIVDL------GAGVELSYFNITLESIAWATSIVLN 119 (124)
Q Consensus 79 P~~~~q~~~a~~~~~~------g~g~~~~~~~~~~~~l~~~l~~ll~ 119 (124)
... ...+.+.+. +.|..+.+ -+.+++.+++.++++
T Consensus 387 ~~g----G~~e~v~~~~~~~~~~~G~lv~~--~d~~~la~~i~~~l~ 427 (466)
T PRK00654 387 RTG----GLADTVIDYNPEDGEATGFVFDD--FNAEDLLRALRRALE 427 (466)
T ss_pred CCC----CccceeecCCCCCCCCceEEeCC--CCHHHHHHHHHHHHH
Confidence 322 122223222 77888864 357888888888764
>PHA01630 putative group 1 glycosyl transferase
Back Show alignment and domain information
Probab=96.99 E-value=0.0089 Score=43.24 Aligned_cols=73 Identities=15% Similarity=0.183 Sum_probs=45.0
Q ss_pred ccChHHhhcC-CCcceEEecCC----hhhHHHHHHhCCCeeeecccccHHHHHHHHHHc--------------------C
Q psy10186 41 WIPQQDVLAH-PNCRLFISHGG----VNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDL--------------------G 95 (124)
Q Consensus 41 ~~~~~~~l~~-~~~d~~i~~gG----~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~--------------------g 95 (124)
+++..++... ..+|+++..+- ..+++|||++|+|+|+....+ ..+.+.+. +
T Consensus 197 ~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg----~~E~i~~~~ng~lv~~~~~~~~~~~~~~~ 272 (331)
T PHA01630 197 PLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALGLDVVVTEKGA----WSEWVLSNLDVYWIKSGRKPKLWYTNPIH 272 (331)
T ss_pred cCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcCCCEEEeCCCC----chhhccCCCceEEeeecccccccccCCcc
Confidence 3665553222 88999886542 468999999999999964322 22233332 2
Q ss_pred ceeEecCCCCCHHHHHHHHHHHhcC
Q psy10186 96 AGVELSYFNITLESIAWATSIVLNN 120 (124)
Q Consensus 96 ~g~~~~~~~~~~~~l~~~l~~ll~~ 120 (124)
+|..+.+ +.+++.+.+.+++.+
T Consensus 273 ~G~~v~~---~~~~~~~~ii~~l~~ 294 (331)
T PHA01630 273 VGYFLDP---DIEDAYQKLLEALAN 294 (331)
T ss_pred cccccCC---CHHHHHHHHHHHHhC
Confidence 3444432 566777777777765
>PRK14099 glycogen synthase; Provisional
Back Show alignment and domain information
Probab=96.94 E-value=0.0029 Score=47.99 Aligned_cols=105 Identities=18% Similarity=0.288 Sum_probs=58.1
Q ss_pred hCCCeEEEEEcCCC-----C----CCCCCcE-EEeeccChHHhhcCCCcceEEecCC----hhhHHHHHHhCCCeeeecc
Q psy10186 15 RTGLTVLWRYEGDS-----I----ENLPGNV-HIRKWIPQQDVLAHPNCRLFISHGG----VNSALEAIHYGIPIIGVPF 80 (124)
Q Consensus 15 ~~~~~~i~~~g~~~-----~----~~~~~~v-~~~~~~~~~~~l~~~~~d~~i~~gG----~~t~~ea~~~g~P~l~~P~ 80 (124)
+.+.++++..+++. . ...+.++ .+.++-....-+.++.+|+++..+= ..+.+||+++|+|.|+...
T Consensus 322 ~~~~~lvivG~G~~~~~~~l~~l~~~~~~~v~~~~G~~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~ppVvs~~ 401 (485)
T PRK14099 322 GEGAQLALLGSGDAELEARFRAAAQAYPGQIGVVIGYDEALAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARV 401 (485)
T ss_pred hcCcEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCCHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHCCCCcEEeCC
Confidence 34677766654431 1 1234455 4667633322222257999998652 3578999999987776432
Q ss_pred cc--cHHHHHHHH-H--HcCceeEecCCCCCHHHHHHHHHH---HhcCC
Q psy10186 81 YG--DQLSHVRHI-V--DLGAGVELSYFNITLESIAWATSI---VLNNP 121 (124)
Q Consensus 81 ~~--~q~~~a~~~-~--~~g~g~~~~~~~~~~~~l~~~l~~---ll~~~ 121 (124)
.+ |........ + ..+.|..+.+. +.+++.+++.+ +++|+
T Consensus 402 GGl~d~V~~~~~~~~~~~~~~G~l~~~~--d~~~La~ai~~a~~l~~d~ 448 (485)
T PRK14099 402 GGLADTVVDANEMAIATGVATGVQFSPV--TADALAAALRKTAALFADP 448 (485)
T ss_pred CCccceeecccccccccCCCceEEeCCC--CHHHHHHHHHHHHHHhcCH
Confidence 11 211111000 1 11568887643 58889999886 55554
>PLN02316 synthase/transferase
Back Show alignment and domain information
Probab=96.50 E-value=0.044 Score=45.27 Aligned_cols=84 Identities=12% Similarity=0.109 Sum_probs=53.5
Q ss_pred CCcEEEeeccChH---HhhcCCCcceEEecC----ChhhHHHHHHhCCCeeeecccc--cHHHHHHH----HH---HcCc
Q psy10186 33 PGNVHIRKWIPQQ---DVLAHPNCRLFISHG----GVNSALEAIHYGIPIIGVPFYG--DQLSHVRH----IV---DLGA 96 (124)
Q Consensus 33 ~~~v~~~~~~~~~---~~l~~~~~d~~i~~g----G~~t~~ea~~~g~P~l~~P~~~--~q~~~a~~----~~---~~g~ 96 (124)
++++.+...++.. .++ +.+|+|+..+ -..+.+|||++|+|.|+-...+ |....... .+ ..+.
T Consensus 899 ~~rV~f~g~~de~lah~iy--aaADiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~t 976 (1036)
T PLN02316 899 HDRARLCLTYDEPLSHLIY--AGADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPN 976 (1036)
T ss_pred CCeEEEEecCCHHHHHHHH--HhCcEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCc
Confidence 4567776655543 345 8999999765 2468999999999998853322 22211100 00 0257
Q ss_pred eeEecCCCCCHHHHHHHHHHHhcC
Q psy10186 97 GVELSYFNITLESIAWATSIVLNN 120 (124)
Q Consensus 97 g~~~~~~~~~~~~l~~~l~~ll~~ 120 (124)
|..+. ..+.+.+..+|.+.+.+
T Consensus 977 Gflf~--~~d~~aLa~AL~raL~~ 998 (1036)
T PLN02316 977 GFSFD--GADAAGVDYALNRAISA 998 (1036)
T ss_pred eEEeC--CCCHHHHHHHHHHHHhh
Confidence 88885 33678888888888764
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Back Show alignment and domain information
Probab=96.43 E-value=0.0066 Score=35.28 Aligned_cols=57 Identities=21% Similarity=0.214 Sum_probs=41.1
Q ss_pred cCChhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCCC
Q psy10186 59 HGGVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPRR 123 (124)
Q Consensus 59 ~gG~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~~ 123 (124)
.+-...++|++++|+|+|.-+ -......+.+.--++.++ +.+++.+.+..++++|..
T Consensus 9 ~~~~~r~~E~~a~G~~vi~~~----~~~~~~~~~~~~~~~~~~----~~~el~~~i~~ll~~~~~ 65 (92)
T PF13524_consen 9 DGPNMRIFEAMACGTPVISDD----SPGLREIFEDGEHIITYN----DPEELAEKIEYLLENPEE 65 (92)
T ss_pred CCCchHHHHHHHCCCeEEECC----hHHHHHHcCCCCeEEEEC----CHHHHHHHHHHHHCCHHH
Confidence 444568999999999999953 344444443333555555 899999999999998754
>PLN02939 transferase, transferring glycosyl groups
Back Show alignment and domain information
Probab=96.31 E-value=0.055 Score=44.31 Aligned_cols=83 Identities=18% Similarity=0.169 Sum_probs=54.8
Q ss_pred CCcEEEeeccChH---HhhcCCCcceEEecC----ChhhHHHHHHhCCCeeeecccc--cHHHH--HHHH-HHcCceeEe
Q psy10186 33 PGNVHIRKWIPQQ---DVLAHPNCRLFISHG----GVNSALEAIHYGIPIIGVPFYG--DQLSH--VRHI-VDLGAGVEL 100 (124)
Q Consensus 33 ~~~v~~~~~~~~~---~~l~~~~~d~~i~~g----G~~t~~ea~~~g~P~l~~P~~~--~q~~~--a~~~-~~~g~g~~~ 100 (124)
.++|.+.++++.. .++ +.+|+|+..+ -..+.+||+++|+|.|+....+ |...+ ...+ ++.+.|..+
T Consensus 836 ~drV~FlG~~de~lah~IY--AaADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf 913 (977)
T PLN02939 836 NNNIRLILKYDEALSHSIY--AASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTF 913 (977)
T ss_pred CCeEEEEeccCHHHHHHHH--HhCCEEEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEe
Confidence 4578888888764 355 8899999875 2458999999999999864432 22111 1111 123578777
Q ss_pred cCCCCCHHHHHHHHHHHhc
Q psy10186 101 SYFNITLESIAWATSIVLN 119 (124)
Q Consensus 101 ~~~~~~~~~l~~~l~~ll~ 119 (124)
.+ .+.+++.+++.+++.
T Consensus 914 ~~--~D~eaLa~AL~rAL~ 930 (977)
T PLN02939 914 LT--PDEQGLNSALERAFN 930 (977)
T ss_pred cC--CCHHHHHHHHHHHHH
Confidence 53 367788888877653
>PRK10017 colanic acid biosynthesis protein; Provisional
Back Show alignment and domain information
Probab=96.25 E-value=0.23 Score=37.33 Aligned_cols=111 Identities=16% Similarity=0.202 Sum_probs=72.3
Q ss_pred HHHHHHHHHhhCCCeEEEEEcC--------CCC-------CC--CCCcEEE-ee-ccChH--HhhcCCCcceEEecCChh
Q psy10186 5 MRTLLVTAFSRTGLTVLWRYEG--------DSI-------EN--LPGNVHI-RK-WIPQQ--DVLAHPNCRLFISHGGVN 63 (124)
Q Consensus 5 ~~~~~~~~l~~~~~~~i~~~g~--------~~~-------~~--~~~~v~~-~~-~~~~~--~~l~~~~~d~~i~~gG~~ 63 (124)
.+.++++.+.+.|+++++.-.. ++. .. .+.++++ .+ +-+.+ .++ .+||++|..==+
T Consensus 261 ~la~~i~~Li~~g~~Vv~lp~~~~~~~~~~dD~~~~~~l~~~~~~~~~~~vi~~~~~~~e~~~iI--s~~dl~ig~RlH- 337 (426)
T PRK10017 261 AFAGVVNRIIDEGYQVIALSTCTGIDSYNKDDRMVALNLRQHVSDPARYHVVMDELNDLEMGKIL--GACELTVGTRLH- 337 (426)
T ss_pred HHHHHHHHHHHCCCeEEEEecccCccCCCCchHHHHHHHHHhcccccceeEecCCCChHHHHHHH--hhCCEEEEecch-
Confidence 4455666666668887765432 110 00 2333333 32 22332 455 789998876544
Q ss_pred hHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeE-ecCCCCCHHHHHHHHHHHhcCC
Q psy10186 64 SALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVE-LSYFNITLESIAWATSIVLNNP 121 (124)
Q Consensus 64 t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~-~~~~~~~~~~l~~~l~~ll~~~ 121 (124)
++.-|+..|+|++.+++ .+.....+.+.|.... ++.++++.+++.+.+.+++++.
T Consensus 338 a~I~a~~~gvP~i~i~Y---~~K~~~~~~~lg~~~~~~~~~~l~~~~Li~~v~~~~~~r 393 (426)
T PRK10017 338 SAIISMNFGTPAIAINY---EHKSAGIMQQLGLPEMAIDIRHLLDGSLQAMVADTLGQL 393 (426)
T ss_pred HHHHHHHcCCCEEEeee---hHHHHHHHHHcCCccEEechhhCCHHHHHHHHHHHHhCH
Confidence 57778999999999976 3555666688888755 6667888899999999988763
>PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional
Back Show alignment and domain information
Probab=96.23 E-value=0.12 Score=36.80 Aligned_cols=95 Identities=16% Similarity=0.225 Sum_probs=55.4
Q ss_pred HHHHHHHHHHhhCCCeEEEEEcCCCCCCCCCcEEEeeccChHHhhcCCCcceEEecCChhhHHHHHHh----CCCeeeec
Q psy10186 4 GMRTLLVTAFSRTGLTVLWRYEGDSIENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHY----GIPIIGVP 79 (124)
Q Consensus 4 ~~~~~~~~~l~~~~~~~i~~~g~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~----g~P~l~~P 79 (124)
+.+..+++.+++.++.+.+-........ ..+. . ..+..+.- ..+|++|+-||-||+++++.. ++|++.+.
T Consensus 21 e~~~~i~~~L~~~g~~v~v~~~~~~~~~-~~~~--~-~~~~~~~~--~~~d~vi~~GGDGt~l~~~~~~~~~~~pilGIn 94 (291)
T PRK02155 21 EPLESLAAFLAKRGFEVVFEADTARNIG-LTGY--P-ALTPEEIG--ARADLAVVLGGDGTMLGIGRQLAPYGVPLIGIN 94 (291)
T ss_pred HHHHHHHHHHHHCCCEEEEecchhhhcC-cccc--c-ccChhHhc--cCCCEEEEECCcHHHHHHHHHhcCCCCCEEEEc
Confidence 4567777778888887766432111000 0000 0 11223322 578999999999999999774 67888873
Q ss_pred ccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcC
Q psy10186 80 FYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNN 120 (124)
Q Consensus 80 ~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~ 120 (124)
.. .+|... +++.+++.+.+.++++.
T Consensus 95 ~G-------------~lGFL~---~~~~~~~~~~l~~~~~g 119 (291)
T PRK02155 95 HG-------------RLGFIT---DIPLDDMQETLPPMLAG 119 (291)
T ss_pred CC-------------Cccccc---cCCHHHHHHHHHHHHcC
Confidence 21 123222 34567777777776643
>TIGR02919 accessory Sec system glycosyltransferase GtfB
Back Show alignment and domain information
Probab=96.20 E-value=0.028 Score=42.30 Aligned_cols=108 Identities=17% Similarity=0.237 Sum_probs=67.9
Q ss_pred HHHHHHHHHHHhhCC-CeEEEEEcCC------CCCCCCCcEEE-eeccC--hHHhhcCCCcceE--EecCC--hhhHHHH
Q psy10186 3 DGMRTLLVTAFSRTG-LTVLWRYEGD------SIENLPGNVHI-RKWIP--QQDVLAHPNCRLF--ISHGG--VNSALEA 68 (124)
Q Consensus 3 ~~~~~~~~~~l~~~~-~~~i~~~g~~------~~~~~~~~v~~-~~~~~--~~~~l~~~~~d~~--i~~gG--~~t~~ea 68 (124)
.+.++.+.....++| ++|-+..+.. +.. ..+|+.. .++.+ ..+++ ..||++ |+|+. ..++.||
T Consensus 291 s~~I~~i~~Lv~~lPd~~f~Iga~te~s~kL~~L~-~y~nvvly~~~~~~~l~~ly--~~~dlyLdin~~e~~~~al~eA 367 (438)
T TIGR02919 291 SDQIEHLEEIVQALPDYHFHIAALTEMSSKLMSLD-KYDNVKLYPNITTQKIQELY--QTCDIYLDINHGNEILNAVRRA 367 (438)
T ss_pred HHHHHHHHHHHHhCCCcEEEEEecCcccHHHHHHH-hcCCcEEECCcChHHHHHHH--HhccEEEEccccccHHHHHHHH
Confidence 456666666667775 5776655443 122 2356654 44555 34566 788886 56664 5789999
Q ss_pred HHhCCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCC
Q psy10186 69 IHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNP 121 (124)
Q Consensus 69 ~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~ 121 (124)
+.+|+|++..=. -..+...+.+ |.++.. -+.+++.++|.+++.++
T Consensus 368 ~~~G~pI~afd~---t~~~~~~i~~---g~l~~~--~~~~~m~~~i~~lL~d~ 412 (438)
T TIGR02919 368 FEYNLLILGFEE---TAHNRDFIAS---ENIFEH--NEVDQLISKLKDLLNDP 412 (438)
T ss_pred HHcCCcEEEEec---ccCCcccccC---CceecC--CCHHHHHHHHHHHhcCH
Confidence 999999999622 1222233333 444432 25889999999998876
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Back Show alignment and domain information
Probab=96.04 E-value=0.038 Score=42.67 Aligned_cols=97 Identities=20% Similarity=0.254 Sum_probs=67.3
Q ss_pred CHHHHHHHHHHHhhCCCeEEEEEcCCCC-------------CC-CCCcEEEeeccChHHhhcC-CCcceEEec---CChh
Q psy10186 2 SDGMRTLLVTAFSRTGLTVLWRYEGDSI-------------EN-LPGNVHIRKWIPQQDVLAH-PNCRLFISH---GGVN 63 (124)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~i~~~g~~~~-------------~~-~~~~v~~~~~~~~~~~l~~-~~~d~~i~~---gG~~ 63 (124)
+++.+..=++-|+..|-.++|..++... .+ .+..+++.+-.|..+-++. ..+|+|+.. ||+.
T Consensus 443 ~pev~~~wmqIL~~vP~Svl~L~~~~~~~~~~~~l~~la~~~Gv~~eRL~f~p~~~~~~h~a~~~iADlvLDTyPY~g~T 522 (620)
T COG3914 443 TPEVFALWMQILSAVPNSVLLLKAGGDDAEINARLRDLAEREGVDSERLRFLPPAPNEDHRARYGIADLVLDTYPYGGHT 522 (620)
T ss_pred CHHHHHHHHHHHHhCCCcEEEEecCCCcHHHHHHHHHHHHHcCCChhheeecCCCCCHHHHHhhchhheeeecccCCCcc
Confidence 4667777778888889989998776220 11 3567888887775543332 889999864 7999
Q ss_pred hHHHHHHhCCCeeeecccccHHHH---HHHHHHcCceeEe
Q psy10186 64 SALEAIHYGIPIIGVPFYGDQLSH---VRHIVDLGAGVEL 100 (124)
Q Consensus 64 t~~ea~~~g~P~l~~P~~~~q~~~---a~~~~~~g~g~~~ 100 (124)
|.+|++.+|+|++..+ ++|+.- +..+...|+-..+
T Consensus 523 Ta~daLwm~vPVlT~~--G~~FasR~~~si~~~agi~e~v 560 (620)
T COG3914 523 TASDALWMGVPVLTRV--GEQFASRNGASIATNAGIPELV 560 (620)
T ss_pred chHHHHHhcCceeeec--cHHHHHhhhHHHHHhcCCchhh
Confidence 9999999999999974 666542 3333445655444
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I
Back Show alignment and domain information
Probab=95.94 E-value=0.048 Score=38.86 Aligned_cols=110 Identities=14% Similarity=0.059 Sum_probs=67.4
Q ss_pred CHHHHHHHHHHHhhCCCeEEEEEcCCCC-------CCCCCcEEEeeccChHHhhcC-CCcceEEecCChhhHHHHHHhCC
Q psy10186 2 SDGMRTLLVTAFSRTGLTVLWRYEGDSI-------ENLPGNVHIRKWIPQQDVLAH-PNCRLFISHGGVNSALEAIHYGI 73 (124)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~i~~~g~~~~-------~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~~gG~~t~~ea~~~g~ 73 (124)
|.+.+.++++.+.+.++++++..|+... .+.-++..+.+-.+..++.+. ..||++|+.-.. .+.=|.+.|+
T Consensus 196 p~e~~~~l~~~l~~~~~~~vl~~g~~~e~~~~~~i~~~~~~~~l~g~~sL~el~ali~~a~l~I~~DSg-p~HlAaa~g~ 274 (319)
T TIGR02193 196 PEERWRELARLLLARGLQIVLPWGNDAEKQRAERIAEALPGAVVLPKMSLAEVAALLAGADAVVGVDTG-LTHLAAALDK 274 (319)
T ss_pred CHHHHHHHHHHHHHCCCeEEEeCCCHHHHHHHHHHHhhCCCCeecCCCCHHHHHHHHHcCCEEEeCCCh-HHHHHHHcCC
Confidence 6788999999997778888776554321 111122244454454332222 889999998866 5777889999
Q ss_pred Ceeee--cccccHHHHHHHHHHcCce-eEec---CCCCCHHHHHHHHHHHh
Q psy10186 74 PIIGV--PFYGDQLSHVRHIVDLGAG-VELS---YFNITLESIAWATSIVL 118 (124)
Q Consensus 74 P~l~~--P~~~~q~~~a~~~~~~g~g-~~~~---~~~~~~~~l~~~l~~ll 118 (124)
|++.+ |....+ ..-.|-. ..+. -++.+.+++.+++++++
T Consensus 275 P~i~lfg~t~p~~------~~P~~~~~~~~~~~~~~~I~~~~V~~ai~~~~ 319 (319)
T TIGR02193 275 PTVTLYGATDPGR------TGGYGKPNVALLGESGANPTPDEVLAALEELL 319 (319)
T ss_pred CEEEEECCCCHhh------cccCCCCceEEccCccCCCCHHHHHHHHHhhC
Confidence 99986 322111 1011111 1111 34678999999998874
This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
>KOG0853|consensus
Back Show alignment and domain information
Probab=95.91 E-value=0.0028 Score=47.98 Aligned_cols=84 Identities=12% Similarity=0.100 Sum_probs=56.3
Q ss_pred EEEeeccChHHhhcC-CCcceEEec-CC---hhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHH
Q psy10186 36 VHIRKWIPQQDVLAH-PNCRLFISH-GG---VNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESI 110 (124)
Q Consensus 36 v~~~~~~~~~~~l~~-~~~d~~i~~-gG---~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l 110 (124)
+.+....++.+.+.. +.++++... .+ ..+++||+++|+|++.. ++-.-++.+++.-.|..++++.-....+
T Consensus 348 v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~glPvvAt----~~GGP~EiV~~~~tG~l~dp~~e~~~~~ 423 (495)
T KOG0853|consen 348 VWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMACGLPVVAT----NNGGPAEIVVHGVTGLLIDPGQEAVAEL 423 (495)
T ss_pred EEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhcCCCEEEe----cCCCceEEEEcCCcceeeCCchHHHHHH
Confidence 334444444332221 566665444 33 35899999999999996 5666667777777888887633334479
Q ss_pred HHHHHHHhcCCCC
Q psy10186 111 AWATSIVLNNPRR 123 (124)
Q Consensus 111 ~~~l~~ll~~~~~ 123 (124)
++++.++..||++
T Consensus 424 a~~~~kl~~~p~l 436 (495)
T KOG0853|consen 424 ADALLKLRRDPEL 436 (495)
T ss_pred HHHHHHHhcCHHH
Confidence 9999999998875
>KOG4626|consensus
Back Show alignment and domain information
Probab=95.84 E-value=0.041 Score=43.18 Aligned_cols=100 Identities=12% Similarity=0.221 Sum_probs=66.8
Q ss_pred CHHHHHHHHHHHhhCCCeEEEEEcCCCC------------CCCCCcEEEeeccChHHhhc-CCCcceEEecC---ChhhH
Q psy10186 2 SDGMRTLLVTAFSRTGLTVLWRYEGDSI------------ENLPGNVHIRKWIPQQDVLA-HPNCRLFISHG---GVNSA 65 (124)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~i~~~g~~~~------------~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~~g---G~~t~ 65 (124)
.++.++.-++-|.+.|..++|....... .-.|+.+.+.+-....+-+. ...+|+.+... |..|-
T Consensus 772 dP~~l~~W~~ILk~VPnS~LwllrfPa~ge~rf~ty~~~~Gl~p~riifs~va~k~eHvrr~~LaDv~LDTplcnGhTTg 851 (966)
T KOG4626|consen 772 DPSTLQMWANILKRVPNSVLWLLRFPAVGEQRFRTYAEQLGLEPDRIIFSPVAAKEEHVRRGQLADVCLDTPLCNGHTTG 851 (966)
T ss_pred CHHHHHHHHHHHHhCCcceeEEEeccccchHHHHHHHHHhCCCccceeeccccchHHHHHhhhhhhhcccCcCcCCcccc
Confidence 4667777778888899999998654321 11456676666555444332 25577766554 77899
Q ss_pred HHHHHhCCCeeeeccccc-HHHHHHHHHHcCceeEec
Q psy10186 66 LEAIHYGIPIIGVPFYGD-QLSHVRHIVDLGAGVELS 101 (124)
Q Consensus 66 ~ea~~~g~P~l~~P~~~~-q~~~a~~~~~~g~g~~~~ 101 (124)
++.+..|+|++..|.-.- ..--+..+...|+|..+-
T Consensus 852 ~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hlia 888 (966)
T KOG4626|consen 852 MDVLWAGVPMVTMPGETLASRVAASLLTALGLGHLIA 888 (966)
T ss_pred hhhhccCCceeecccHHHHHHHHHHHHHHcccHHHHh
Confidence 999999999999986432 233455667778887554
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long)
Back Show alignment and domain information
Probab=95.84 E-value=0.054 Score=39.49 Aligned_cols=82 Identities=17% Similarity=0.197 Sum_probs=65.9
Q ss_pred CcEEE-eeccChHHhhcC-CCcceEEecC----ChhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecCCCCCH
Q psy10186 34 GNVHI-RKWIPQQDVLAH-PNCRLFISHG----GVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITL 107 (124)
Q Consensus 34 ~~v~~-~~~~~~~~~l~~-~~~d~~i~~g----G~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~ 107 (124)
+++.+ .+++|..+-+.. .+||+.|..- |.|+++-.+.+|+|+.+- .+..--+.+.+.|+-+....++++.
T Consensus 245 ~~~~iL~e~mpf~eYl~lL~~cDl~if~~~RQQgiGnI~lLl~~G~~v~L~----~~np~~~~l~~~~ipVlf~~d~L~~ 320 (360)
T PF07429_consen 245 ENFQILTEFMPFDEYLALLSRCDLGIFNHNRQQGIGNICLLLQLGKKVFLS----RDNPFWQDLKEQGIPVLFYGDELDE 320 (360)
T ss_pred cceeEhhhhCCHHHHHHHHHhCCEEEEeechhhhHhHHHHHHHcCCeEEEe----cCChHHHHHHhCCCeEEeccccCCH
Confidence 47765 568887663322 8899977655 899999999999999994 6667777888889999888889999
Q ss_pred HHHHHHHHHHhc
Q psy10186 108 ESIAWATSIVLN 119 (124)
Q Consensus 108 ~~l~~~l~~ll~ 119 (124)
+.+.++=+++..
T Consensus 321 ~~v~ea~rql~~ 332 (360)
T PF07429_consen 321 ALVREAQRQLAN 332 (360)
T ss_pred HHHHHHHHHHhh
Confidence 999998887763
This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
>PRK14077 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Back Show alignment and domain information
Probab=95.74 E-value=0.24 Score=35.32 Aligned_cols=92 Identities=16% Similarity=0.175 Sum_probs=52.9
Q ss_pred HHHHHHHHHHhhCCCeEEEEEcCCCCCCCCCcEEEeeccChHHhhcCCCcceEEecCChhhHHHHHHh----CCCeeeec
Q psy10186 4 GMRTLLVTAFSRTGLTVLWRYEGDSIENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHY----GIPIIGVP 79 (124)
Q Consensus 4 ~~~~~~~~~l~~~~~~~i~~~g~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~----g~P~l~~P 79 (124)
+...++.+.|.+.+..+.+--.....-..+ .+ +..++. ..+|++|+=||-||++.++.. ++|++.+-
T Consensus 25 ~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~------~~-~~~~~~--~~~Dlvi~iGGDGT~L~aa~~~~~~~~PilGIN 95 (287)
T PRK14077 25 KEILKLQKILSIYKVEILLEKESAEILDLP------GY-GLDELF--KISDFLISLGGDGTLISLCRKAAEYDKFVLGIH 95 (287)
T ss_pred HHHHHHHHHHHHCCCEEEEecchhhhhccc------cc-chhhcc--cCCCEEEEECCCHHHHHHHHHhcCCCCcEEEEe
Confidence 445666666777777766532111100001 11 112322 469999999999999988663 77988873
Q ss_pred ccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcC
Q psy10186 80 FYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNN 120 (124)
Q Consensus 80 ~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~ 120 (124)
.. .+|-. .+++.+++.++++++++.
T Consensus 96 ~G-------------~lGFL---t~~~~~~~~~~l~~i~~g 120 (287)
T PRK14077 96 AG-------------HLGFL---TDITVDEAEKFFQAFFQG 120 (287)
T ss_pred CC-------------CcccC---CcCCHHHHHHHHHHHHcC
Confidence 21 12222 234567777777776643
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT
Back Show alignment and domain information
Probab=95.72 E-value=0.11 Score=36.31 Aligned_cols=72 Identities=21% Similarity=0.268 Sum_probs=48.7
Q ss_pred HHHHHHHH-hhC-CCeEEEEEcCCC--------CC---CCCCcEEEeeccChHHhhcCCCcceEEecCChhhHHHHHHhC
Q psy10186 6 RTLLVTAF-SRT-GLTVLWRYEGDS--------IE---NLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYG 72 (124)
Q Consensus 6 ~~~~~~~l-~~~-~~~~i~~~g~~~--------~~---~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~g 72 (124)
+.++++.+ ... +.++++..-+.. .. .....+.+.+..+..+++ ..||.+|+-.+. +-+||+.+|
T Consensus 142 ~~~~l~~~~~~~p~~~lvvK~HP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll--~~s~~VvtinSt-vGlEAll~g 218 (269)
T PF05159_consen 142 FLDMLESFAKENPDAKLVVKPHPDERGGNKYSYLEELPNLPNVVIIDDDVNLYELL--EQSDAVVTINST-VGLEALLHG 218 (269)
T ss_pred HHHHHHHHHHHCCCCEEEEEECchhhCCCChhHhhhhhcCCCeEEECCCCCHHHHH--HhCCEEEEECCH-HHHHHHHcC
Confidence 34444434 344 467776655421 11 123344556677888888 789999999887 789999999
Q ss_pred CCeeeecc
Q psy10186 73 IPIIGVPF 80 (124)
Q Consensus 73 ~P~l~~P~ 80 (124)
||++++..
T Consensus 219 kpVi~~G~ 226 (269)
T PF05159_consen 219 KPVIVFGR 226 (269)
T ss_pred CceEEecC
Confidence 99999844
Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Back Show alignment and domain information
Probab=95.68 E-value=0.037 Score=41.87 Aligned_cols=75 Identities=15% Similarity=0.171 Sum_probs=51.6
Q ss_pred EeeccChHHhhcC-CCcceEEecC---C-hhhHHHHHHhCCC----eeeecccccHHHHHHHHHHcCceeEecCCCCCHH
Q psy10186 38 IRKWIPQQDVLAH-PNCRLFISHG---G-VNSALEAIHYGIP----IIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLE 108 (124)
Q Consensus 38 ~~~~~~~~~~l~~-~~~d~~i~~g---G-~~t~~ea~~~g~P----~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~ 108 (124)
+.+.++..++.+. ..+|+++..+ | ..++.|++++|+| +|+--.. ..+..+ +.|..+++ .+.+
T Consensus 340 l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~----G~~~~l---~~gllVnP--~d~~ 410 (456)
T TIGR02400 340 LNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFA----GAAQEL---NGALLVNP--YDID 410 (456)
T ss_pred EcCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcCCCCceEEEeCCC----CChHHh---CCcEEECC--CCHH
Confidence 3446677665443 8999999876 5 4678899999999 6664322 223333 25777754 3688
Q ss_pred HHHHHHHHHhcCC
Q psy10186 109 SIAWATSIVLNNP 121 (124)
Q Consensus 109 ~l~~~l~~ll~~~ 121 (124)
+++++|.++++.+
T Consensus 411 ~lA~aI~~aL~~~ 423 (456)
T TIGR02400 411 GMADAIARALTMP 423 (456)
T ss_pred HHHHHHHHHHcCC
Confidence 9999999998754
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases
Back Show alignment and domain information
Probab=95.56 E-value=0.075 Score=39.23 Aligned_cols=103 Identities=20% Similarity=0.198 Sum_probs=65.1
Q ss_pred CCeEEEEEcCCCC--------CCCCCcEEEeec-cChHHhhcCCCcceEEecCChhhHHHHHHhCCCeeeecc-cccHHH
Q psy10186 17 GLTVLWRYEGDSI--------ENLPGNVHIRKW-IPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPF-YGDQLS 86 (124)
Q Consensus 17 ~~~~i~~~g~~~~--------~~~~~~v~~~~~-~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~g~P~l~~P~-~~~q~~ 86 (124)
+.+|++..-+... .....++.+... -...+.+ ..||+.+..+|. .++|++..|+|++++=. ..=...
T Consensus 218 ~l~fvvp~a~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~m--~~ad~al~~SGT-aTLE~Al~g~P~Vv~Yk~~~lt~~ 294 (373)
T PF02684_consen 218 DLQFVVPVAPEVHEELIEEILAEYPPDVSIVIIEGESYDAM--AAADAALAASGT-ATLEAALLGVPMVVAYKVSPLTYF 294 (373)
T ss_pred CeEEEEecCCHHHHHHHHHHHHhhCCCCeEEEcCCchHHHH--HhCcchhhcCCH-HHHHHHHhCCCEEEEEcCcHHHHH
Confidence 4677776654321 112333333322 2345566 789999999988 68999999999999722 223455
Q ss_pred HHHHHHHcCc--------eeEec----CCCCCHHHHHHHHHHHhcCCC
Q psy10186 87 HVRHIVDLGA--------GVELS----YFNITLESIAWATSIVLNNPR 122 (124)
Q Consensus 87 ~a~~~~~~g~--------g~~~~----~~~~~~~~l~~~l~~ll~~~~ 122 (124)
.++++.+... |..+- .++++.+.+.+.+.++++|+.
T Consensus 295 iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~~~~ll~~~~ 342 (373)
T PF02684_consen 295 IAKRLVKVKYISLPNIIAGREVVPELIQEDATPENIAAELLELLENPE 342 (373)
T ss_pred HHHHhhcCCEeechhhhcCCCcchhhhcccCCHHHHHHHHHHHhcCHH
Confidence 6666654321 11111 257799999999999998864
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Back Show alignment and domain information
Probab=95.54 E-value=0.14 Score=37.79 Aligned_cols=79 Identities=18% Similarity=0.205 Sum_probs=57.1
Q ss_pred CcEEEeecc---ChHHhhcCCCcceEEecCChhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHH
Q psy10186 34 GNVHIRKWI---PQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESI 110 (124)
Q Consensus 34 ~~v~~~~~~---~~~~~l~~~~~d~~i~~gG~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l 110 (124)
+++.+.+.+ +...++ ..|-++++-+|.. --||...|+|++++-...+++. ..+.|.-+.+. .+.+.+
T Consensus 262 ~~v~li~pl~~~~f~~L~--~~a~~iltDSGgi-qEEAp~lg~Pvl~lR~~TERPE----~v~agt~~lvg---~~~~~i 331 (383)
T COG0381 262 ERVKLIDPLGYLDFHNLM--KNAFLILTDSGGI-QEEAPSLGKPVLVLRDTTERPE----GVEAGTNILVG---TDEENI 331 (383)
T ss_pred CcEEEeCCcchHHHHHHH--HhceEEEecCCch-hhhHHhcCCcEEeeccCCCCcc----ceecCceEEeC---ccHHHH
Confidence 457766654 455566 6788999999874 7899999999999966667765 23345545554 367888
Q ss_pred HHHHHHHhcCCC
Q psy10186 111 AWATSIVLNNPR 122 (124)
Q Consensus 111 ~~~l~~ll~~~~ 122 (124)
.+++.++++++.
T Consensus 332 ~~~~~~ll~~~~ 343 (383)
T COG0381 332 LDAATELLEDEE 343 (383)
T ss_pred HHHHHHHhhChH
Confidence 889988887754
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Back Show alignment and domain information
Probab=95.45 E-value=0.4 Score=33.97 Aligned_cols=109 Identities=19% Similarity=0.204 Sum_probs=66.6
Q ss_pred HHHHHhhCCCeEEEEEcCCCCCC----------CCCcEEE----eeccChHHhhcCCCcceEEecCC-hhhHHHHHHhCC
Q psy10186 9 LVTAFSRTGLTVLWRYEGDSIEN----------LPGNVHI----RKWIPQQDVLAHPNCRLFISHGG-VNSALEAIHYGI 73 (124)
Q Consensus 9 ~~~~l~~~~~~~i~~~g~~~~~~----------~~~~v~~----~~~~~~~~~l~~~~~d~~i~~gG-~~t~~ea~~~g~ 73 (124)
+.+.+++.|..|+....+..++. ..+.+.+ .++=|+.+.| ..+|.+|+... .+.+.||++.|+
T Consensus 189 l~k~l~~~g~~~lisfSRRTp~~~~s~l~~~l~s~~~i~w~~~d~g~NPY~~~L--a~Adyii~TaDSinM~sEAasTgk 266 (329)
T COG3660 189 LVKILENQGGSFLISFSRRTPDTVKSILKNNLNSSPGIVWNNEDTGYNPYIDML--AAADYIISTADSINMCSEAASTGK 266 (329)
T ss_pred HHHHHHhCCceEEEEeecCCcHHHHHHHHhccccCceeEeCCCCCCCCchHHHH--hhcceEEEecchhhhhHHHhccCC
Confidence 34455667788888776643211 1111221 2445778888 78999888776 466789999999
Q ss_pred Ceeee-cccc---cHHHHHHHHHHcCceeEecCCC----------C-CHHHHHHHHHHHhc
Q psy10186 74 PIIGV-PFYG---DQLSHVRHIVDLGAGVELSYFN----------I-TLESIAWATSIVLN 119 (124)
Q Consensus 74 P~l~~-P~~~---~q~~~a~~~~~~g~g~~~~~~~----------~-~~~~l~~~l~~ll~ 119 (124)
|+-+. |... --...-+.+++.+++..+..++ + ..+.+++.|+..+.
T Consensus 267 Pv~~~~~~~~~s~K~r~Fi~~L~eq~~AR~f~~~~~~~e~ysy~PLnEt~RiA~~Ira~l~ 327 (329)
T COG3660 267 PVFILEPPNFNSLKFRIFIEQLVEQKIARPFEGSNLALEEYSYKPLNETERIAEEIRAELG 327 (329)
T ss_pred CeEEEecCCcchHHHHHHHHHHHHhhhccccCcchhhhcccccCCchHHHHHHHHHHHHhC
Confidence 99886 3322 1233455566677776665321 1 36677777776653
>PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Back Show alignment and domain information
Probab=95.44 E-value=0.33 Score=34.93 Aligned_cols=98 Identities=17% Similarity=0.245 Sum_probs=56.9
Q ss_pred HHHHHHHHHHhhCCCeEEEEEcCCC-CCC-CCC---cEEEeeccCh-HHhhcCCCcceEEecCChhhHHHHHHh----CC
Q psy10186 4 GMRTLLVTAFSRTGLTVLWRYEGDS-IEN-LPG---NVHIRKWIPQ-QDVLAHPNCRLFISHGGVNSALEAIHY----GI 73 (124)
Q Consensus 4 ~~~~~~~~~l~~~~~~~i~~~g~~~-~~~-~~~---~v~~~~~~~~-~~~l~~~~~d~~i~~gG~~t~~ea~~~----g~ 73 (124)
+...++.+.|.+.+..+.+.-.... ... .+. .+. ...++. .... ..+|++|+=||-||++.+++. ++
T Consensus 21 ~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~D~vi~lGGDGT~L~aar~~~~~~~ 97 (306)
T PRK03372 21 EAARRVAKQLGDAGIGVRVLDAEAVDLGATHPAPDDFRA-MEVVDADPDAA--DGCELVLVLGGDGTILRAAELARAADV 97 (306)
T ss_pred HHHHHHHHHHHHCCCEEEEeechhhhhcccccccccccc-cccccchhhcc--cCCCEEEEEcCCHHHHHHHHHhccCCC
Confidence 4566777778788887766432111 100 000 000 111121 2222 579999999999999998764 78
Q ss_pred CeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcC
Q psy10186 74 PIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNN 120 (124)
Q Consensus 74 P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~ 120 (124)
|++.+.. ..+|... ++..+++.++++++++.
T Consensus 98 PilGIN~-------------G~lGFL~---~~~~~~~~~~l~~i~~g 128 (306)
T PRK03372 98 PVLGVNL-------------GHVGFLA---EAEAEDLDEAVERVVDR 128 (306)
T ss_pred cEEEEec-------------CCCceec---cCCHHHHHHHHHHHHcC
Confidence 9998843 1133333 24567777777777754
>PRK01231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Back Show alignment and domain information
Probab=95.29 E-value=0.41 Score=34.24 Aligned_cols=95 Identities=23% Similarity=0.297 Sum_probs=57.7
Q ss_pred HHHHHHHHHHhhCCCeEEEEEcCCCCCCCCCcEEEeeccChHHhhcCCCcceEEecCChhhHHHHHHh----CCCeeeec
Q psy10186 4 GMRTLLVTAFSRTGLTVLWRYEGDSIENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHY----GIPIIGVP 79 (124)
Q Consensus 4 ~~~~~~~~~l~~~~~~~i~~~g~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~----g~P~l~~P 79 (124)
+..+++.+.|.+.+..+.+.-.... ..+.+- ....+..++- ..+|++|+=||-||+++++.. ++|++.+.
T Consensus 20 e~~~~i~~~L~~~giev~v~~~~~~--~~~~~~--~~~~~~~~~~--~~~d~vi~~GGDGt~l~~~~~~~~~~~Pvlgin 93 (295)
T PRK01231 20 ETLRRLKDFLLDRGLEVILDEETAE--VLPGHG--LQTVSRKLLG--EVCDLVIVVGGDGSLLGAARALARHNVPVLGIN 93 (295)
T ss_pred HHHHHHHHHHHHCCCEEEEecchhh--hcCccc--ccccchhhcc--cCCCEEEEEeCcHHHHHHHHHhcCCCCCEEEEe
Confidence 4566777778788887655321111 011110 1122222222 468999999999999999763 66888874
Q ss_pred ccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcC
Q psy10186 80 FYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNN 120 (124)
Q Consensus 80 ~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~ 120 (124)
. -.+|.. .+++.+++.++++++++.
T Consensus 94 ~-------------G~lGFl---~~~~~~~~~~~l~~~~~g 118 (295)
T PRK01231 94 R-------------GRLGFL---TDIRPDELEFKLAEVLDG 118 (295)
T ss_pred C-------------Cccccc---ccCCHHHHHHHHHHHHcC
Confidence 3 123322 345788888888888754
>PRK01911 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Back Show alignment and domain information
Probab=95.27 E-value=0.37 Score=34.42 Aligned_cols=99 Identities=19% Similarity=0.207 Sum_probs=55.9
Q ss_pred HHHHHHHHHHhhCCCeEEEEEcCCCCCCCCCcE--EEeeccChHHhhcCCCcceEEecCChhhHHHHHHh----CCCeee
Q psy10186 4 GMRTLLVTAFSRTGLTVLWRYEGDSIENLPGNV--HIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHY----GIPIIG 77 (124)
Q Consensus 4 ~~~~~~~~~l~~~~~~~i~~~g~~~~~~~~~~v--~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~----g~P~l~ 77 (124)
+...++.+.|.+.+..+++--............ ......+..++. ..+|++|+=||-||++.++.. ++|++.
T Consensus 16 ~~~~~i~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~dlvi~lGGDGT~L~aa~~~~~~~~PilG 93 (292)
T PRK01911 16 PYIQELFDELEERGAEVLIEEKFLDFLKQDLKFHPSYDTFSDNEELD--GSADMVISIGGDGTFLRTATYVGNSNIPILG 93 (292)
T ss_pred HHHHHHHHHHHHCCCEEEEecchhhhhccccccccccccccchhhcc--cCCCEEEEECCcHHHHHHHHHhcCCCCCEEE
Confidence 356677777888888776632211100000000 000110222322 468999999999999999874 679888
Q ss_pred ecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcC
Q psy10186 78 VPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNN 120 (124)
Q Consensus 78 ~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~ 120 (124)
+-.. .+|... +++.+++.+++++++++
T Consensus 94 IN~G-------------~lGFLt---~~~~~~~~~~l~~i~~g 120 (292)
T PRK01911 94 INTG-------------RLGFLA---TVSKEEIEETIDELLNG 120 (292)
T ss_pred EecC-------------CCCccc---ccCHHHHHHHHHHHHcC
Confidence 7331 133222 34567777777777654
>PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Back Show alignment and domain information
Probab=95.21 E-value=0.49 Score=33.91 Aligned_cols=96 Identities=22% Similarity=0.234 Sum_probs=55.9
Q ss_pred HHHHHHHHHHhhCCCeEEEEEcCCC---CCCC-CCcEEEeeccChHHhhcCCCcceEEecCChhhHHHHHHh----CCCe
Q psy10186 4 GMRTLLVTAFSRTGLTVLWRYEGDS---IENL-PGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHY----GIPI 75 (124)
Q Consensus 4 ~~~~~~~~~l~~~~~~~i~~~g~~~---~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~----g~P~ 75 (124)
+....+.+.|.+.+..+++--.... .... ..+. ...+..++. ..+|++|+=||-||++.+++. ++|+
T Consensus 21 ~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~--~~~D~vi~lGGDGT~L~aa~~~~~~~~Pi 95 (296)
T PRK04539 21 DTAHTLITFLKQHGFTVYLDEVGIKEGCIYTQDTVGC---HIVNKTELG--QYCDLVAVLGGDGTFLSVAREIAPRAVPI 95 (296)
T ss_pred HHHHHHHHHHHHCCCEEEEecccccccchhccccccc---cccchhhcC--cCCCEEEEECCcHHHHHHHHHhcccCCCE
Confidence 3566677777788887765321110 0000 0111 112223322 469999999999999999753 7899
Q ss_pred eeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcC
Q psy10186 76 IGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNN 120 (124)
Q Consensus 76 l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~ 120 (124)
+.+-.. .+|... +++.+++.+++++++++
T Consensus 96 lGIN~G-------------~lGFL~---~~~~~~~~~~l~~i~~g 124 (296)
T PRK04539 96 IGINQG-------------HLGFLT---QIPREYMTDKLLPVLEG 124 (296)
T ss_pred EEEecC-------------CCeEee---ccCHHHHHHHHHHHHcC
Confidence 988321 134333 24667777777777654
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Back Show alignment and domain information
Probab=95.14 E-value=0.15 Score=37.04 Aligned_cols=76 Identities=17% Similarity=0.192 Sum_probs=52.3
Q ss_pred CHHHHHHHHHHHhhCCCeEEEEEcCCCCC-----C------CCCcEEEeeccChHHhhcC-CCcceEEecCChhhHHHHH
Q psy10186 2 SDGMRTLLVTAFSRTGLTVLWRYEGDSIE-----N------LPGNVHIRKWIPQQDVLAH-PNCRLFISHGGVNSALEAI 69 (124)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~i~~~g~~~~~-----~------~~~~v~~~~~~~~~~~l~~-~~~d~~i~~gG~~t~~ea~ 69 (124)
|.+.+.++++.|.+.++++++..|+++.+ + .+..+.+.+..+..++.+. ..||++|+.-.. .+.=|.
T Consensus 200 p~e~fa~l~~~L~~~~~~vvl~ggp~e~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~~a~l~v~nDSG-p~HlAa 278 (352)
T PRK10422 200 DNDKFSAVIDALQARGYEVVLTSGPDKDDLACVNEIAQGCQTPPVTALAGKTTFPELGALIDHAQLFIGVDSA-PAHIAA 278 (352)
T ss_pred CHHHHHHHHHHHHHCCCeEEEEcCCChHHHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHhCCEEEecCCH-HHHHHH
Confidence 67889999999987788988877764311 0 1122334555554442222 889999999866 577788
Q ss_pred HhCCCeeee
Q psy10186 70 HYGIPIIGV 78 (124)
Q Consensus 70 ~~g~P~l~~ 78 (124)
+.|+|++.+
T Consensus 279 A~g~P~v~l 287 (352)
T PRK10422 279 AVNTPLICL 287 (352)
T ss_pred HcCCCEEEE
Confidence 999999986
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS)
Back Show alignment and domain information
Probab=95.13 E-value=0.14 Score=35.80 Aligned_cols=76 Identities=16% Similarity=0.178 Sum_probs=50.3
Q ss_pred CHHHHHHHHHHHhhCCCeEEEEEcCCCCC-------CC--CCcEEEeeccChHHhhcC-CCcceEEecCChhhHHHHHHh
Q psy10186 2 SDGMRTLLVTAFSRTGLTVLWRYEGDSIE-------NL--PGNVHIRKWIPQQDVLAH-PNCRLFISHGGVNSALEAIHY 71 (124)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~i~~~g~~~~~-------~~--~~~v~~~~~~~~~~~l~~-~~~d~~i~~gG~~t~~ea~~~ 71 (124)
|.+.+.++++.+.+.++++++..++++.. .. ...+.+.+..+..++... ..+|++|+.-. |++.=|.+.
T Consensus 138 ~~~~~~~l~~~l~~~~~~ivl~g~~~e~~~~~~i~~~~~~~~~~~~~~~~~l~e~~~li~~~~l~I~~Ds-g~~HlA~a~ 216 (279)
T cd03789 138 PAERFAALADRLLARGARVVLTGGPAERELAEEIAAALGGPRVVNLAGKTSLRELAALLARADLVVTNDS-GPMHLAAAL 216 (279)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEechhhHHHHHHHHHhcCCCccccCcCCCCHHHHHHHHHhCCEEEeeCC-HHHHHHHHc
Confidence 67889999999987788988776654311 11 122223343333332222 78999999965 356667899
Q ss_pred CCCeeee
Q psy10186 72 GIPIIGV 78 (124)
Q Consensus 72 g~P~l~~ 78 (124)
|+|++.+
T Consensus 217 ~~p~i~l 223 (279)
T cd03789 217 GTPTVAL 223 (279)
T ss_pred CCCEEEE
Confidence 9999987
Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Back Show alignment and domain information
Probab=95.02 E-value=0.11 Score=37.21 Aligned_cols=111 Identities=10% Similarity=0.080 Sum_probs=68.8
Q ss_pred CHHHHHHHHHHHhhCCCeEEEEEcCC-C------CCCCCCcEEEeeccChHHhhcC-CCcceEEecCChhhHHHHHHhCC
Q psy10186 2 SDGMRTLLVTAFSRTGLTVLWRYEGD-S------IENLPGNVHIRKWIPQQDVLAH-PNCRLFISHGGVNSALEAIHYGI 73 (124)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~i~~~g~~-~------~~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~~gG~~t~~ea~~~g~ 73 (124)
|.+.+.++++.+.+.++++++..|+. + ..+..+++.+.+..+..++.+. ..||++|+.-.. .+.=|.+.|+
T Consensus 195 p~e~~a~li~~l~~~~~~ivl~~G~~~e~~~~~~i~~~~~~~~l~g~~sL~elaali~~a~l~I~nDSG-p~HlA~A~g~ 273 (322)
T PRK10964 195 PEAHWRELIGLLAPSGLRIKLPWGAEHEEQRAKRLAEGFPYVEVLPKLSLEQVARVLAGAKAVVSVDTG-LSHLTAALDR 273 (322)
T ss_pred CHHHHHHHHHHHHHCCCeEEEeCCCHHHHHHHHHHHccCCcceecCCCCHHHHHHHHHhCCEEEecCCc-HHHHHHHhCC
Confidence 67889999999987788877654542 1 1112233445555554432222 889999998865 6888899999
Q ss_pred Ceeee--cccccHHHHHHHHHHcC-ceeEec-----CCCCCHHHHHHHHHHHhc
Q psy10186 74 PIIGV--PFYGDQLSHVRHIVDLG-AGVELS-----YFNITLESIAWATSIVLN 119 (124)
Q Consensus 74 P~l~~--P~~~~q~~~a~~~~~~g-~g~~~~-----~~~~~~~~l~~~l~~ll~ 119 (124)
|++.+ |..... +.- .| ....+. -.+.+.+++.++++++++
T Consensus 274 p~valfGpt~p~~--~~p----~~~~~~~~~~~~~cm~~I~~e~V~~~~~~~l~ 321 (322)
T PRK10964 274 PNITLYGPTDPGL--IGG----YGKNQHACRSPGKSMADLSAETVFQKLETLIS 321 (322)
T ss_pred CEEEEECCCCccc--ccC----CCCCceeecCCCcccccCCHHHHHHHHHHHhh
Confidence 99997 332111 100 00 011111 236789999999998874
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Back Show alignment and domain information
Probab=94.99 E-value=0.058 Score=42.08 Aligned_cols=74 Identities=16% Similarity=0.154 Sum_probs=50.8
Q ss_pred HHhhcCCCcceEEecCChhhHHHHHHhCCCeeeeccc-ccHHHHHHHHHHc-----C-----ce-----eEec-CCCCCH
Q psy10186 45 QDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFY-GDQLSHVRHIVDL-----G-----AG-----VELS-YFNITL 107 (124)
Q Consensus 45 ~~~l~~~~~d~~i~~gG~~t~~ea~~~g~P~l~~P~~-~~q~~~a~~~~~~-----g-----~g-----~~~~-~~~~~~ 107 (124)
.+++ ..||+.+..+|. .++|++..|+|++++=.. .=-...++++.+. + +| ..+. .++++.
T Consensus 483 ~~~m--~aaD~aLaaSGT-aTLEaAL~g~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIagr~VvPEllqgQ~~~tp 559 (608)
T PRK01021 483 YELM--RECDCALAKCGT-IVLETALNQTPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILGSTIFPEFIGGKKDFQP 559 (608)
T ss_pred HHHH--HhcCeeeecCCH-HHHHHHHhCCCEEEEEecCHHHHHHHHHHHhccCCeeehhHHhcCCCcchhhcCCcccCCH
Confidence 4666 789999999998 689999999999997222 2233455665551 1 11 2232 357789
Q ss_pred HHHHHHHHHHhcCCC
Q psy10186 108 ESIAWATSIVLNNPR 122 (124)
Q Consensus 108 ~~l~~~l~~ll~~~~ 122 (124)
+++.+++ +++.|++
T Consensus 560 e~La~~l-~lL~d~~ 573 (608)
T PRK01021 560 EEVAAAL-DILKTSQ 573 (608)
T ss_pred HHHHHHH-HHhcCHH
Confidence 9999986 7777764
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor
Back Show alignment and domain information
Probab=94.90 E-value=0.039 Score=41.64 Aligned_cols=76 Identities=13% Similarity=0.131 Sum_probs=50.2
Q ss_pred EeeccChHHhhcC-CCcceEEecC---C-hhhHHHHHHhCCC---eeeecccccHHHHHHHHHHcCceeEecCCCCCHHH
Q psy10186 38 IRKWIPQQDVLAH-PNCRLFISHG---G-VNSALEAIHYGIP---IIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLES 109 (124)
Q Consensus 38 ~~~~~~~~~~l~~-~~~d~~i~~g---G-~~t~~ea~~~g~P---~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~ 109 (124)
+.++++..++... ..+|+++..+ | ..+++||+++|+| ++++.. ....+.. ...|..+++ .+.++
T Consensus 345 ~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~---~~G~~~~---~~~g~lv~p--~d~~~ 416 (460)
T cd03788 345 LYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSE---FAGAAEE---LSGALLVNP--YDIDE 416 (460)
T ss_pred EeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEecCCCceEEEec---cccchhh---cCCCEEECC--CCHHH
Confidence 3457777665443 8999998765 3 3578899999999 334322 1111111 235677754 35889
Q ss_pred HHHHHHHHhcCC
Q psy10186 110 IAWATSIVLNNP 121 (124)
Q Consensus 110 l~~~l~~ll~~~ 121 (124)
++++|.++++++
T Consensus 417 la~ai~~~l~~~ 428 (460)
T cd03788 417 VADAIHRALTMP 428 (460)
T ss_pred HHHHHHHHHcCC
Confidence 999999998765
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
>PRK03378 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Back Show alignment and domain information
Probab=94.84 E-value=0.6 Score=33.40 Aligned_cols=95 Identities=19% Similarity=0.135 Sum_probs=53.9
Q ss_pred HHHHHHHHHHhhCCCeEEEEEcCCCCCCCCCcEEEeeccChHHhhcCCCcceEEecCChhhHHHHHHh----CCCeeeec
Q psy10186 4 GMRTLLVTAFSRTGLTVLWRYEGDSIENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHY----GIPIIGVP 79 (124)
Q Consensus 4 ~~~~~~~~~l~~~~~~~i~~~g~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~----g~P~l~~P 79 (124)
+...++.+.|.+.++.+.+--....... ... ....+..++. ..+|++|+=||-||++.++.. ++|++.+-
T Consensus 21 ~~~~~i~~~l~~~g~~v~~~~~~~~~~~-~~~---~~~~~~~~~~--~~~d~vi~lGGDGT~L~aa~~~~~~~~Pilgin 94 (292)
T PRK03378 21 TTHEMLYHWLTSKGYEVIVEQQIAHELQ-LKN---VKTGTLAEIG--QQADLAIVVGGDGNMLGAARVLARYDIKVIGIN 94 (292)
T ss_pred HHHHHHHHHHHHCCCEEEEecchhhhcC-ccc---ccccchhhcC--CCCCEEEEECCcHHHHHHHHHhcCCCCeEEEEE
Confidence 3456667777777777655321110000 000 0111222322 469999999999999999753 67888873
Q ss_pred ccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcC
Q psy10186 80 FYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNN 120 (124)
Q Consensus 80 ~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~ 120 (124)
.. .+|... +++.+++.++++++++.
T Consensus 95 ~G-------------~lGFl~---~~~~~~~~~~l~~i~~g 119 (292)
T PRK03378 95 RG-------------NLGFLT---DLDPDNALQQLSDVLEG 119 (292)
T ss_pred CC-------------CCCccc---ccCHHHHHHHHHHHHcC
Confidence 21 123222 24567777777777654
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Back Show alignment and domain information
Probab=94.75 E-value=0.18 Score=34.62 Aligned_cols=81 Identities=25% Similarity=0.389 Sum_probs=53.3
Q ss_pred CCcEEEeeccChHH---hhcCCCcceEEecC---Ch-hhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecCCCC
Q psy10186 33 PGNVHIRKWIPQQD---VLAHPNCRLFISHG---GV-NSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNI 105 (124)
Q Consensus 33 ~~~v~~~~~~~~~~---~l~~~~~d~~i~~g---G~-~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~ 105 (124)
..++.+.++++..+ ++ ..+|+++... |. .++.|++++|+|++.- +.....+.+.+.+.|..... .
T Consensus 256 ~~~v~~~g~~~~~~~~~~~--~~~~~~v~ps~~e~~~~~~~Ea~a~g~pvi~~----~~~~~~e~~~~~~~g~~~~~-~- 327 (381)
T COG0438 256 EDNVKFLGYVPDEELAELL--ASADVFVLPSLSEGFGLVLLEAMAAGTPVIAS----DVGGIPEVVEDGETGLLVPP-G- 327 (381)
T ss_pred CCcEEEecccCHHHHHHHH--HhCCEEEeccccccchHHHHHHHhcCCcEEEC----CCCChHHHhcCCCceEecCC-C-
Confidence 46788888888322 33 6688888773 33 4469999999999885 33334444444434653332 2
Q ss_pred CHHHHHHHHHHHhcCC
Q psy10186 106 TLESIAWATSIVLNNP 121 (124)
Q Consensus 106 ~~~~l~~~l~~ll~~~ 121 (124)
+.+++..++..+++++
T Consensus 328 ~~~~~~~~i~~~~~~~ 343 (381)
T COG0438 328 DVEELADALEQLLEDP 343 (381)
T ss_pred CHHHHHHHHHHHhcCH
Confidence 6788888888887664
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Back Show alignment and domain information
Probab=94.71 E-value=0.2 Score=36.15 Aligned_cols=81 Identities=19% Similarity=0.196 Sum_probs=58.7
Q ss_pred CcEEE-eeccChHHhhcC-CCcceEEecC----ChhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecCCCCCH
Q psy10186 34 GNVHI-RKWIPQQDVLAH-PNCRLFISHG----GVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITL 107 (124)
Q Consensus 34 ~~v~~-~~~~~~~~~l~~-~~~d~~i~~g----G~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~ 107 (124)
+++.+ .+++|..+-+.. +.||+.|..- |.||++-.+..|+|+++- .+..--+.+.+.|+-+....++++.
T Consensus 206 ~~~~~L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~lLi~~G~~v~l~----r~n~fwqdl~e~gv~Vlf~~d~L~~ 281 (322)
T PRK02797 206 ENFQILTEKLPFDDYLALLRQCDLGYFIFARQQGIGTLCLLIQLGKPVVLS----RDNPFWQDLTEQGLPVLFTGDDLDE 281 (322)
T ss_pred ccEEehhhhCCHHHHHHHHHhCCEEEEeechhhHHhHHHHHHHCCCcEEEe----cCCchHHHHHhCCCeEEecCCcccH
Confidence 57765 557776553222 8899965544 899999999999999995 3433334477788888888888888
Q ss_pred HHHHHHHHHHh
Q psy10186 108 ESIAWATSIVL 118 (124)
Q Consensus 108 ~~l~~~l~~ll 118 (124)
..+.++=+++.
T Consensus 282 ~~v~e~~rql~ 292 (322)
T PRK02797 282 DIVREAQRQLA 292 (322)
T ss_pred HHHHHHHHHHH
Confidence 88888755543
>PRK03501 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Back Show alignment and domain information
Probab=94.70 E-value=0.44 Score=33.61 Aligned_cols=55 Identities=15% Similarity=0.257 Sum_probs=37.3
Q ss_pred CCcceEEecCChhhHHHHHHh-----CCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcC
Q psy10186 51 PNCRLFISHGGVNSALEAIHY-----GIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNN 120 (124)
Q Consensus 51 ~~~d~~i~~gG~~t~~ea~~~-----g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~ 120 (124)
..+|++|+=||-||++.++.. .+|++.+...+ .+|.. .+++.+++.+++++++++
T Consensus 38 ~~~D~vi~lGGDGT~L~a~~~~~~~~~~pilgIn~~G------------~lGFL---~~~~~~~~~~~l~~i~~g 97 (264)
T PRK03501 38 KNANIIVSIGGDGTFLQAVRKTGFREDCLYAGISTKD------------QLGFY---CDFHIDDLDKMIQAITKE 97 (264)
T ss_pred CCccEEEEECCcHHHHHHHHHhcccCCCeEEeEecCC------------CCeEc---ccCCHHHHHHHHHHHHcC
Confidence 458999999999999999875 56767763311 23322 234667777777777644
>PRK02231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Back Show alignment and domain information
Probab=94.59 E-value=0.81 Score=32.41 Aligned_cols=92 Identities=22% Similarity=0.220 Sum_probs=52.8
Q ss_pred HHHHHHHHhhCCCeEEEEEcCCCCCCCCCcEEEeeccChHHhhcCCCcceEEecCChhhHHHHHHh----CCCeeeeccc
Q psy10186 6 RTLLVTAFSRTGLTVLWRYEGDSIENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHY----GIPIIGVPFY 81 (124)
Q Consensus 6 ~~~~~~~l~~~~~~~i~~~g~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~----g~P~l~~P~~ 81 (124)
..++.+.|.+.+..+.+--........+. ..+.+..++. ..+|++|+=||-||++.+++. ++|++.+-..
T Consensus 2 ~~~l~~~l~~~g~~v~~~~~~~~~~~~~~----~~~~~~~~~~--~~~d~vi~iGGDGT~L~aa~~~~~~~~PilgIn~G 75 (272)
T PRK02231 2 HKNLFHWLKERGYQVLVEKEIAEQLNLPE----NHLASLEEIG--QRAQLAIVIGGDGNMLGRARVLAKYDIPLIGINRG 75 (272)
T ss_pred HHHHHHHHHHCCCEEEEecchhhhcCccc----cccCChHHhC--cCCCEEEEECCcHHHHHHHHHhccCCCcEEEEeCC
Confidence 34566778888887766421111101010 1112333333 568999999999999988653 6798887321
Q ss_pred ccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhc
Q psy10186 82 GDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLN 119 (124)
Q Consensus 82 ~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~ 119 (124)
.+|... +++.+++.+.+.++++
T Consensus 76 -------------~lGFL~---~~~~~~~~~~l~~~~~ 97 (272)
T PRK02231 76 -------------NLGFLT---DIDPKNAYEQLEACLE 97 (272)
T ss_pred -------------CCcccc---cCCHHHHHHHHHHHHh
Confidence 133333 2356666666666665
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II
Back Show alignment and domain information
Probab=94.53 E-value=0.17 Score=36.29 Aligned_cols=76 Identities=11% Similarity=0.129 Sum_probs=50.6
Q ss_pred CHHHHHHHHHHHhhCCCeEEEEEcCCCCC-------CCCCcE-EEeeccChHHhhcC-CCcceEEecCChhhHHHHHHhC
Q psy10186 2 SDGMRTLLVTAFSRTGLTVLWRYEGDSIE-------NLPGNV-HIRKWIPQQDVLAH-PNCRLFISHGGVNSALEAIHYG 72 (124)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~i~~~g~~~~~-------~~~~~v-~~~~~~~~~~~l~~-~~~d~~i~~gG~~t~~ea~~~g 72 (124)
|.+.+.++++.+.+.+.++++..++++.. ..+.++ .+.+-.+..++.+. ..||++|+.-.. .+.=|.+.|
T Consensus 192 p~e~~~~li~~l~~~~~~ivl~G~~~e~~~~~~i~~~~~~~~~~l~g~~sL~el~ali~~a~l~I~~DSG-p~HlAaA~~ 270 (334)
T TIGR02195 192 PHEHYAELAKRLIDQGYQVVLFGSAKDHPAGNEIEALLPGELRNLAGETSLDEAVDLIALAKAVVTNDSG-LMHVAAALN 270 (334)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEChhhHHHHHHHHHhCCcccccCCCCCCHHHHHHHHHhCCEEEeeCCH-HHHHHHHcC
Confidence 67888999999877778887776654311 122222 23444443332222 889999998866 577788999
Q ss_pred CCeeee
Q psy10186 73 IPIIGV 78 (124)
Q Consensus 73 ~P~l~~ 78 (124)
+|+|.+
T Consensus 271 ~P~i~l 276 (334)
T TIGR02195 271 RPLVAL 276 (334)
T ss_pred CCEEEE
Confidence 999986
This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Back Show alignment and domain information
Probab=94.50 E-value=0.49 Score=34.20 Aligned_cols=106 Identities=21% Similarity=0.161 Sum_probs=62.0
Q ss_pred HHHHHHHHHhhCCCeEEEEEcCCC----CCCCCCcEEEe-eccChHHhhcCCCcceEEecCChhhHHHHHHhCCCeeeec
Q psy10186 5 MRTLLVTAFSRTGLTVLWRYEGDS----IENLPGNVHIR-KWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVP 79 (124)
Q Consensus 5 ~~~~~~~~l~~~~~~~i~~~g~~~----~~~~~~~v~~~-~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~g~P~l~~P 79 (124)
....+++.|.+.| ++...+.. ..+...|+.+. +-++...++ -.|+++|.-||. ---||+..|+|.|.+=
T Consensus 205 ~~~~li~~l~k~g---iV~ipr~~~~~eife~~~n~i~pk~~vD~l~Ll--yya~lvig~ggT-MarEaAlLGtpaIs~~ 278 (346)
T COG1817 205 VLPDLIKELKKYG---IVLIPREKEQAEIFEGYRNIIIPKKAVDTLSLL--YYATLVIGAGGT-MAREAALLGTPAISCY 278 (346)
T ss_pred hHHHHHHHHHhCc---EEEecCchhHHHHHhhhccccCCcccccHHHHH--hhhheeecCCch-HHHHHHHhCCceEEec
Confidence 4566777777777 44444432 12233333332 345667777 569999988876 4679999999999972
Q ss_pred ccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCC
Q psy10186 80 FYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNP 121 (124)
Q Consensus 80 ~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~ 121 (124)
.+.-...-+++.+.|.-.... +..++.+...+.+.++
T Consensus 279 -pGkll~vdk~lie~G~~~~s~----~~~~~~~~a~~~l~~~ 315 (346)
T COG1817 279 -PGKLLAVDKYLIEKGLLYHST----DEIAIVEYAVRNLKYR 315 (346)
T ss_pred -CCccccccHHHHhcCceeecC----CHHHHHHHHHHHhhch
Confidence 233344455666666655433 3334444444444443
>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Back Show alignment and domain information
Probab=94.38 E-value=0.17 Score=35.59 Aligned_cols=29 Identities=34% Similarity=0.493 Sum_probs=24.9
Q ss_pred CCcceEEecCChhhHHHHHH------hCCCeeeec
Q psy10186 51 PNCRLFISHGGVNSALEAIH------YGIPIIGVP 79 (124)
Q Consensus 51 ~~~d~~i~~gG~~t~~ea~~------~g~P~l~~P 79 (124)
..+|++|+-||-||++.+++ .++|++.+.
T Consensus 34 ~~~Dlvi~iGGDGT~L~a~~~~~~~~~~iPilGIN 68 (265)
T PRK04885 34 KNPDIVISVGGDGTLLSAFHRYENQLDKVRFVGVH 68 (265)
T ss_pred cCCCEEEEECCcHHHHHHHHHhcccCCCCeEEEEe
Confidence 46899999999999999986 478988874
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Back Show alignment and domain information
Probab=94.29 E-value=0.19 Score=36.40 Aligned_cols=76 Identities=11% Similarity=0.100 Sum_probs=50.9
Q ss_pred CHHHHHHHHHHHhhCCCeEEEEEcCCCCC-------CCC----Cc-EEEeeccChHHhhcC-CCcceEEecCChhhHHHH
Q psy10186 2 SDGMRTLLVTAFSRTGLTVLWRYEGDSIE-------NLP----GN-VHIRKWIPQQDVLAH-PNCRLFISHGGVNSALEA 68 (124)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~i~~~g~~~~~-------~~~----~~-v~~~~~~~~~~~l~~-~~~d~~i~~gG~~t~~ea 68 (124)
|.+.+.++++.|.+.++++++..|+++.. ..+ .+ +.+.+-.+..++.+. ..|+++|+.-.. .+.=|
T Consensus 198 p~e~~a~l~~~l~~~~~~vvl~Gg~~e~~~~~~i~~~~~~~~~~~~~~l~g~~sL~el~ali~~a~l~I~nDTG-p~HlA 276 (348)
T PRK10916 198 PHYHYAELAQQLIDEGYQVVLFGSAKDHEAGNEILAALNTEQQAWCRNLAGETQLEQAVILIAACKAIVTNDSG-LMHVA 276 (348)
T ss_pred CHHHHHHHHHHHHHCCCeEEEEeCHHhHHHHHHHHHhcccccccceeeccCCCCHHHHHHHHHhCCEEEecCCh-HHHHH
Confidence 67889999999887788887776654311 111 11 234444444442222 789999998765 57889
Q ss_pred HHhCCCeeee
Q psy10186 69 IHYGIPIIGV 78 (124)
Q Consensus 69 ~~~g~P~l~~ 78 (124)
.+.|+|++.+
T Consensus 277 aA~g~P~val 286 (348)
T PRK10916 277 AALNRPLVAL 286 (348)
T ss_pred HHhCCCEEEE
Confidence 9999999986
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins
Back Show alignment and domain information
Probab=94.26 E-value=0.51 Score=34.04 Aligned_cols=111 Identities=16% Similarity=0.104 Sum_probs=64.5
Q ss_pred HHHHHHHHhhCCCeEEEEEcCCCC----------CCCCCcEEEeecc---ChHHhhcCCCcceEEecCC-hhhHHHHHHh
Q psy10186 6 RTLLVTAFSRTGLTVLWRYEGDSI----------ENLPGNVHIRKWI---PQQDVLAHPNCRLFISHGG-VNSALEAIHY 71 (124)
Q Consensus 6 ~~~~~~~l~~~~~~~i~~~g~~~~----------~~~~~~v~~~~~~---~~~~~l~~~~~d~~i~~gG-~~t~~ea~~~ 71 (124)
+..+.+...+.+..+.+.+.+... .+..+.+.+.+-- |....| ..||.++..+. .+-+.||+..
T Consensus 171 ~~~l~~~~~~~~~~~~vttSRRTp~~~~~~L~~~~~~~~~~~~~~~~~~nPy~~~L--a~ad~i~VT~DSvSMvsEA~~t 248 (311)
T PF06258_consen 171 LDQLAALAAAYGGSLLVTTSRRTPPEAEAALRELLKDNPGVYIWDGTGENPYLGFL--AAADAIVVTEDSVSMVSEAAAT 248 (311)
T ss_pred HHHHHHHHHhCCCeEEEEcCCCCcHHHHHHHHHhhcCCCceEEecCCCCCcHHHHH--HhCCEEEEcCccHHHHHHHHHc
Confidence 334444445556566666555321 1123444333332 456667 77888776665 5777899999
Q ss_pred CCCeeeecccccH---HHHHHHHHHcCceeEecCC----CC-------CHHHHHHHHHHHh
Q psy10186 72 GIPIIGVPFYGDQ---LSHVRHIVDLGAGVELSYF----NI-------TLESIAWATSIVL 118 (124)
Q Consensus 72 g~P~l~~P~~~~q---~~~a~~~~~~g~g~~~~~~----~~-------~~~~l~~~l~~ll 118 (124)
|+|+.++|..... ....+.+++.|....+... .. +++.+++.|.+-+
T Consensus 249 G~pV~v~~l~~~~~r~~r~~~~L~~~g~~r~~~~~~~~~~~~~~~pl~et~r~A~~i~~r~ 309 (311)
T PF06258_consen 249 GKPVYVLPLPGRSGRFRRFHQSLEERGAVRPFTGWRDLEQWTPYEPLDETDRVAAEIRERL 309 (311)
T ss_pred CCCEEEecCCCcchHHHHHHHHHHHCCCEEECCCcccccccccCCCccHHHHHHHHHHHHh
Confidence 9999999876521 1234556667777766532 11 2556666666543
The function of this family is unknown.
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis
Back Show alignment and domain information
Probab=93.86 E-value=0.43 Score=37.33 Aligned_cols=74 Identities=12% Similarity=0.119 Sum_probs=44.9
Q ss_pred hHHhhcCCCcceEEecC---C-hhhHHHHHHhCCCeeeecccccHHHHHHHHHH-c-CceeEecC-C--C--CCHHHHHH
Q psy10186 44 QQDVLAHPNCRLFISHG---G-VNSALEAIHYGIPIIGVPFYGDQLSHVRHIVD-L-GAGVELSY-F--N--ITLESIAW 112 (124)
Q Consensus 44 ~~~~l~~~~~d~~i~~g---G-~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~-~-g~g~~~~~-~--~--~~~~~l~~ 112 (124)
..+++ +.||+++..+ | ..+++||+++|+|+|.-...+ -...+..+.. . ..|+.+.+ + + .+.+++.+
T Consensus 468 y~E~~--~g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~g-f~~~v~E~v~~~~~~gi~V~~r~~~~~~e~v~~La~ 544 (590)
T cd03793 468 YEEFV--RGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSG-FGCFMEEHIEDPESYGIYIVDRRFKSPDESVQQLTQ 544 (590)
T ss_pred hHHHh--hhceEEEeccccCCCCcHHHHHHHcCCCEEEccCcc-hhhhhHHHhccCCCceEEEecCCccchHHHHHHHHH
Confidence 45556 8999999866 3 458999999999999964321 0111222222 2 24655542 1 1 24667777
Q ss_pred HHHHHhcC
Q psy10186 113 ATSIVLNN 120 (124)
Q Consensus 113 ~l~~ll~~ 120 (124)
++.+++..
T Consensus 545 ~m~~~~~~ 552 (590)
T cd03793 545 YMYEFCQL 552 (590)
T ss_pred HHHHHhCC
Confidence 77777743
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
>PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Back Show alignment and domain information
Probab=93.81 E-value=0.24 Score=35.59 Aligned_cols=99 Identities=17% Similarity=0.154 Sum_probs=56.0
Q ss_pred HHHHHHHHHHhhCCCeEEEEEcCCCCCCCCCc--EEE-ee--ccChHHhhcCCCcceEEecCChhhHHHHHHh----CCC
Q psy10186 4 GMRTLLVTAFSRTGLTVLWRYEGDSIENLPGN--VHI-RK--WIPQQDVLAHPNCRLFISHGGVNSALEAIHY----GIP 74 (124)
Q Consensus 4 ~~~~~~~~~l~~~~~~~i~~~g~~~~~~~~~~--v~~-~~--~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~----g~P 74 (124)
+....+.+.|.+.+..+.+--........+.. ... .+ ..+..+.. ..+|++|+=||-||++.+++. ++|
T Consensus 17 ~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~Dlvi~iGGDGTlL~aar~~~~~~iP 94 (305)
T PRK02649 17 RTAEELQDKLEAAGWEVVRASSSGGILGYANPDQPVCHTGIDQLVPPGFD--SSMKFAIVLGGDGTVLSAARQLAPCGIP 94 (305)
T ss_pred HHHHHHHHHHHHCCCEEEEecchhhhcCccccccccccccccccChhhcc--cCcCEEEEEeCcHHHHHHHHHhcCCCCc
Confidence 35567777778888877664321111010100 000 00 01112222 469999999999999999875 789
Q ss_pred eeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcC
Q psy10186 75 IIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNN 120 (124)
Q Consensus 75 ~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~ 120 (124)
++.+-. ..+|... +++.+++.+++++++++
T Consensus 95 ilGIN~-------------G~lGFLt---~~~~~~~~~~l~~l~~g 124 (305)
T PRK02649 95 LLTINT-------------GHLGFLT---EAYLNQLDEAIDQVLAG 124 (305)
T ss_pred EEEEeC-------------CCCcccc---cCCHHHHHHHHHHHHcC
Confidence 998832 1133222 34567777777777654
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative
Back Show alignment and domain information
Probab=93.72 E-value=0.45 Score=34.36 Aligned_cols=76 Identities=18% Similarity=0.253 Sum_probs=51.0
Q ss_pred CHHHHHHHHHHHhhCCCeEEEEEcCCCC---------CCCC-Cc-EEEeeccChHHhhcC-CCcceEEecCChhhHHHHH
Q psy10186 2 SDGMRTLLVTAFSRTGLTVLWRYEGDSI---------ENLP-GN-VHIRKWIPQQDVLAH-PNCRLFISHGGVNSALEAI 69 (124)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~i~~~g~~~~---------~~~~-~~-v~~~~~~~~~~~l~~-~~~d~~i~~gG~~t~~ea~ 69 (124)
|.+.+.++++.+.+.++++++..|+++. ...+ ++ +.+.+-.+..++.+. ..|+++|+.-+. .+.=|.
T Consensus 198 p~e~~~~l~~~l~~~~~~ivl~g~p~~~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~~a~l~Vs~DSG-p~HlAa 276 (344)
T TIGR02201 198 DNDRFSALIDALHARGYEVVLTSGPDKDELAMVNEIAQGCQTPRVTSLAGKLTLPQLAALIDHARLFIGVDSV-PMHMAA 276 (344)
T ss_pred CHHHHHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHhhCCCCcccccCCCCCHHHHHHHHHhCCEEEecCCH-HHHHHH
Confidence 6788899999998778888877665411 1111 12 234444443332222 889999999654 688899
Q ss_pred HhCCCeeee
Q psy10186 70 HYGIPIIGV 78 (124)
Q Consensus 70 ~~g~P~l~~ 78 (124)
+.|+|+|.+
T Consensus 277 A~g~p~v~L 285 (344)
T TIGR02201 277 ALGTPLVAL 285 (344)
T ss_pred HcCCCEEEE
Confidence 999999986
This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases
Back Show alignment and domain information
Probab=93.46 E-value=0.14 Score=35.09 Aligned_cols=76 Identities=13% Similarity=0.141 Sum_probs=48.2
Q ss_pred CHHHHHHHHHHHhhCCCeEEEEEcCCC-C--------CCCC-CcEEEeeccChHHhhcC-CCcceEEecCChhhHHHHHH
Q psy10186 2 SDGMRTLLVTAFSRTGLTVLWRYEGDS-I--------ENLP-GNVHIRKWIPQQDVLAH-PNCRLFISHGGVNSALEAIH 70 (124)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~i~~~g~~~-~--------~~~~-~~v~~~~~~~~~~~l~~-~~~d~~i~~gG~~t~~ea~~ 70 (124)
|.+.+.++++.+.+.++++++..++.+ . ...+ ..+.+.+-.+..++.+. ..||++|+.-+. .+.=|.+
T Consensus 122 p~e~~~~l~~~l~~~~~~vvl~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~ali~~a~~~I~~Dtg-~~HlA~a 200 (247)
T PF01075_consen 122 PAEKWAELIERLKERGYRVVLLGGPEEQEKEIADQIAAGLQNPVINLAGKTSLRELAALISRADLVIGNDTG-PMHLAAA 200 (247)
T ss_dssp -HHHHHHHHHHHCCCT-EEEE--SSHHHHHHHHHHHHTTHTTTTEEETTTS-HHHHHHHHHTSSEEEEESSH-HHHHHHH
T ss_pred CHHHHHHHHHHHHhhCceEEEEccchHHHHHHHHHHHHhcccceEeecCCCCHHHHHHHHhcCCEEEecCCh-HHHHHHH
Confidence 678899999999988878776666643 0 1111 24555555554442222 789999998876 5888899
Q ss_pred hCCCeeee
Q psy10186 71 YGIPIIGV 78 (124)
Q Consensus 71 ~g~P~l~~ 78 (124)
.|+|+|.+
T Consensus 201 ~~~p~v~l 208 (247)
T PF01075_consen 201 LGTPTVAL 208 (247)
T ss_dssp TT--EEEE
T ss_pred HhCCEEEE
Confidence 99999997
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
>TIGR00725 conserved hypothetical protein, DprA/Smf-related, family 1
Back Show alignment and domain information
Probab=93.05 E-value=0.93 Score=29.42 Aligned_cols=39 Identities=18% Similarity=0.256 Sum_probs=27.3
Q ss_pred cChHHhhcCCCcceE-EecCChhhHH---HHHHhCCCeeeeccc
Q psy10186 42 IPQQDVLAHPNCRLF-ISHGGVNSAL---EAIHYGIPIIGVPFY 81 (124)
Q Consensus 42 ~~~~~~l~~~~~d~~-i~~gG~~t~~---ea~~~g~P~l~~P~~ 81 (124)
.+...++. ..+|++ +-.||.||+. |++.+++|+++++..
T Consensus 82 ~~Rk~~m~-~~sda~IvlpGG~GTL~E~~~a~~~~kpv~~l~~~ 124 (159)
T TIGR00725 82 FARNFILV-RSADVVVSVGGGYGTAIEILGAYALGGPVVVLRGT 124 (159)
T ss_pred chHHHHHH-HHCCEEEEcCCchhHHHHHHHHHHcCCCEEEEECC
Confidence 34555555 677875 5566778776 468899999998754
This model represents one branch of a subfamily of uncharacterized proteins. Both PSI-BLAST and weak hits by this model show a low level of similarity and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting the branches may have distinct functions. This family is one of several families within the scope of PFAM model pfam03641, several members of which are annotated as lysine decarboxylases. That larger family, and the branch described by this model, have a well-conserved motif PGGXGTXXE.
>PF03641 Lysine_decarbox: Possible lysine decarboxylase; InterPro: IPR005269 This entry represents a cytokinin-activating enzyme working in the direct activation pathway
Back Show alignment and domain information
Probab=92.61 E-value=1.3 Score=27.69 Aligned_cols=88 Identities=13% Similarity=0.170 Sum_probs=46.8
Q ss_pred HHHHHHHhhCCCeEEEEEcCCCCC-CC--C---CcEEEee-ccChHHhhcCCCcce-EEecCChhhHHHHHHh-------
Q psy10186 7 TLLVTAFSRTGLTVLWRYEGDSIE-NL--P---GNVHIRK-WIPQQDVLAHPNCRL-FISHGGVNSALEAIHY------- 71 (124)
Q Consensus 7 ~~~~~~l~~~~~~~i~~~g~~~~~-~~--~---~~v~~~~-~~~~~~~l~~~~~d~-~i~~gG~~t~~ea~~~------- 71 (124)
.++.++..+.+-+++=+....... +. . ....... .......+. ..+|+ ++..||.||+.|....
T Consensus 2 ~a~~~ga~~~gG~viGi~p~~~~~~~~~~~~~~~~~~~~~~~~~Rk~~m~-~~sda~I~lPGG~GTl~El~~~~~~~~l~ 80 (133)
T PF03641_consen 2 GAVAKGAKEAGGRVIGIIPEFLFPFEEPPNPYVTELIIVDDMFERKEIMI-ESSDAFIALPGGIGTLDELFEALTLMQLG 80 (133)
T ss_dssp HHHHHHHHHTTTTEEEEEETTGTTTTTTCCTTSSEEEEESSHHHHHHHHH-HHESEEEEES-SHHHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHcCCeEEEEecCccccccccCCcccCceeEeCChHHHHHHHH-HhCCEEEEEecCCchHHHHHHHHHHHhhc
Confidence 466777777776666665443222 11 1 1222233 333444444 57777 4667788999887433
Q ss_pred --CC-Ceeeecc---cccHHHHHHHHHHcC
Q psy10186 72 --GI-PIIGVPF---YGDQLSHVRHIVDLG 95 (124)
Q Consensus 72 --g~-P~l~~P~---~~~q~~~a~~~~~~g 95 (124)
.+ |++++-. |.+-....+.+.+.|
T Consensus 81 ~~~~~Piil~~~~g~w~~l~~~l~~~~~~g 110 (133)
T PF03641_consen 81 RHNKVPIILLNIDGFWDPLLEFLDRMIEEG 110 (133)
T ss_dssp SSTS-EEEEEECGGCCHHHHHHHHHHHHTT
T ss_pred cccCCCEEEeCCcchHHHHHHHHHHHHHCC
Confidence 44 9988742 223233334455555
It is a phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms [, ]. The proteins in this entry belong to the LOG family of proteins.; PDB: 1YDH_B 2Q4D_A 1RCU_C 1WEH_B 3SBX_F 3BQ9_B 2PMB_D 3GH1_D 1WEK_C 3QUA_A ....
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Back Show alignment and domain information
Probab=92.39 E-value=0.57 Score=33.89 Aligned_cols=76 Identities=20% Similarity=0.167 Sum_probs=51.6
Q ss_pred CHHHHHHHHHHHhhCCCeEEEEEcCCCCC-------CCCCcEEEeeccChHHhhcC-CCcceEEecCChhhHHHHHHhCC
Q psy10186 2 SDGMRTLLVTAFSRTGLTVLWRYEGDSIE-------NLPGNVHIRKWIPQQDVLAH-PNCRLFISHGGVNSALEAIHYGI 73 (124)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~i~~~g~~~~~-------~~~~~v~~~~~~~~~~~l~~-~~~d~~i~~gG~~t~~ea~~~g~ 73 (124)
|.+.+.++++.+.+.++++++..++++.+ ..+..+.+.+-.+..++... ..||++|+.-++ -+.=|.+.|+
T Consensus 193 p~e~~~~l~~~l~~~~~~Vvl~g~~~e~e~~~~i~~~~~~~~~l~~k~sL~e~~~li~~a~l~I~~DSg-~~HlAaA~~~ 271 (334)
T COG0859 193 PLEHYAELAELLIAKGYQVVLFGGPDEEERAEEIAKGLPNAVILAGKTSLEELAALIAGADLVIGNDSG-PMHLAAALGT 271 (334)
T ss_pred CHHHHHHHHHHHHHCCCEEEEecChHHHHHHHHHHHhcCCccccCCCCCHHHHHHHHhcCCEEEccCCh-HHHHHHHcCC
Confidence 67889999999999997776666663311 12222225555554442221 789999988765 5777889999
Q ss_pred Ceeee
Q psy10186 74 PIIGV 78 (124)
Q Consensus 74 P~l~~ 78 (124)
|+|.+
T Consensus 272 P~I~i 276 (334)
T COG0859 272 PTIAL 276 (334)
T ss_pred CEEEE
Confidence 99997
>PRK01185 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Back Show alignment and domain information
Probab=92.16 E-value=0.55 Score=33.23 Aligned_cols=53 Identities=23% Similarity=0.425 Sum_probs=38.2
Q ss_pred CcceEEecCChhhHHHHHHh-CCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcC
Q psy10186 52 NCRLFISHGGVNSALEAIHY-GIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNN 120 (124)
Q Consensus 52 ~~d~~i~~gG~~t~~ea~~~-g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~ 120 (124)
.+|++|+=||-||++.+++. ..|++.+-. ..+|... +++.+++.+++++++++
T Consensus 52 ~~D~vi~lGGDGT~L~a~~~~~~PilGIN~-------------G~lGFL~---~~~~~~~~~~l~~i~~g 105 (271)
T PRK01185 52 NADVIITIGGDGTILRTLQRAKGPILGINM-------------GGLGFLT---EIEIDEVGSAIKKLIRG 105 (271)
T ss_pred CCCEEEEEcCcHHHHHHHHHcCCCEEEEEC-------------CCCccCc---ccCHHHHHHHHHHHHcC
Confidence 58999999999999999884 568877632 1123332 35678888888888764
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria
Back Show alignment and domain information
Probab=91.49 E-value=0.32 Score=35.43 Aligned_cols=102 Identities=11% Similarity=0.063 Sum_probs=56.4
Q ss_pred HHhhCCCeEEEEEcCC---CC---CCCCCcEEEee-ccChHHhhcCCCcceEEecCChhhHHHHHHhCCCeeeecccccH
Q psy10186 12 AFSRTGLTVLWRYEGD---SI---ENLPGNVHIRK-WIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQ 84 (124)
Q Consensus 12 ~l~~~~~~~i~~~g~~---~~---~~~~~~v~~~~-~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~g~P~l~~P~~~~q 84 (124)
.+.+.++.+++..-+. .. ....+++.... ..+..+++ ..+|++||--+. .+.|.+..++|++......|+
T Consensus 224 ~~~~~~~~li~k~Hp~~~~~~~~~~~~~~~i~~~~~~~~~~~ll--~~aDiLITDySS-i~fD~~~l~KPiify~~D~~~ 300 (369)
T PF04464_consen 224 FLLKNNYVLIIKPHPNMKKKFKDFKEDNSNIIFVSDNEDIYDLL--AAADILITDYSS-IIFDFLLLNKPIIFYQPDLEE 300 (369)
T ss_dssp HHHTTTEEEEE--SHHHHTT----TT-TTTEEE-TT-S-HHHHH--HT-SEEEESS-T-HHHHHGGGT--EEEE-TTTTT
T ss_pred HHhCCCcEEEEEeCchhhhchhhhhccCCcEEECCCCCCHHHHH--HhcCEEEEechh-HHHHHHHhCCCEEEEeccHHH
Confidence 4555566665554331 11 23456776544 44577888 789999999977 799999999999987655443
Q ss_pred HHHH----HHHHHcCceeEecCCCCCHHHHHHHHHHHhcC
Q psy10186 85 LSHV----RHIVDLGAGVELSYFNITLESIAWATSIVLNN 120 (124)
Q Consensus 85 ~~~a----~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~ 120 (124)
.... .-.++...|..+. +.++|.++|+..+++
T Consensus 301 Y~~~rg~~~~~~~~~pg~~~~----~~~eL~~~i~~~~~~ 336 (369)
T PF04464_consen 301 YEKERGFYFDYEEDLPGPIVY----NFEELIEAIENIIEN 336 (369)
T ss_dssp TTTTSSBSS-TTTSSSS-EES----SHHHHHHHHTTHHHH
T ss_pred HhhccCCCCchHhhCCCceeC----CHHHHHHHHHhhhhC
Confidence 3111 0122334444444 788898888876643
They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
>PRK14075 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Back Show alignment and domain information
Probab=91.47 E-value=0.86 Score=31.92 Aligned_cols=54 Identities=28% Similarity=0.296 Sum_probs=37.8
Q ss_pred CCcceEEecCChhhHHHHHH-hCCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcC
Q psy10186 51 PNCRLFISHGGVNSALEAIH-YGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNN 120 (124)
Q Consensus 51 ~~~d~~i~~gG~~t~~ea~~-~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~ 120 (124)
..+|++|+=||-||++.+++ .++|++.+... .+|... +++.+++.++++++++.
T Consensus 40 ~~~d~vi~iGGDGT~L~a~~~~~~Pilgin~G-------------~lGfl~---~~~~~~~~~~l~~~~~g 94 (256)
T PRK14075 40 VTADLIIVVGGDGTVLKAAKKVGTPLVGFKAG-------------RLGFLS---SYTLEEIDRFLEDLKNW 94 (256)
T ss_pred CCCCEEEEECCcHHHHHHHHHcCCCEEEEeCC-------------CCcccc---ccCHHHHHHHHHHHHcC
Confidence 56899999999999999876 57888887321 133332 34567777777776643
>PLN02727 NAD kinase
Back Show alignment and domain information
Probab=90.64 E-value=3.5 Score=34.21 Aligned_cols=54 Identities=15% Similarity=0.163 Sum_probs=37.0
Q ss_pred CCcceEEecCChhhHHHHHHh----CCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcC
Q psy10186 51 PNCRLFISHGGVNSALEAIHY----GIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNN 120 (124)
Q Consensus 51 ~~~d~~i~~gG~~t~~ea~~~----g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~ 120 (124)
..+|++|+=||-||++.++.. ++|++.+-.. .+|-.. +++.+++.+.|.+++..
T Consensus 742 ~~~DLVIvLGGDGTlLrAar~~~~~~iPILGINlG-------------rLGFLT---di~~ee~~~~L~~Il~G 799 (986)
T PLN02727 742 ERVDFVACLGGDGVILHASNLFRGAVPPVVSFNLG-------------SLGFLT---SHYFEDFRQDLRQVIHG 799 (986)
T ss_pred cCCCEEEEECCcHHHHHHHHHhcCCCCCEEEEeCC-------------Cccccc---cCCHHHHHHHHHHHHcC
Confidence 579999999999999999775 5788887321 122222 34566666677766643
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Back Show alignment and domain information
Probab=90.53 E-value=0.34 Score=39.27 Aligned_cols=72 Identities=11% Similarity=0.105 Sum_probs=49.1
Q ss_pred eccChHHhhcC-CCcceEEecC---Ch-hhHHHHHHhCCC---eeeecccccHHHHHHHHHHcC-ceeEecCCCCCHHHH
Q psy10186 40 KWIPQQDVLAH-PNCRLFISHG---GV-NSALEAIHYGIP---IIGVPFYGDQLSHVRHIVDLG-AGVELSYFNITLESI 110 (124)
Q Consensus 40 ~~~~~~~~l~~-~~~d~~i~~g---G~-~t~~ea~~~g~P---~l~~P~~~~q~~~a~~~~~~g-~g~~~~~~~~~~~~l 110 (124)
.+++..++.+. ..+|+++..+ |. .+..|++++|+| +++++.+ ...+.. .| .|+.+++ .+.+++
T Consensus 362 ~~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~---~G~~~~---l~~~allVnP--~D~~~l 433 (797)
T PLN03063 362 CSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEF---AGAGQS---LGAGALLVNP--WNITEV 433 (797)
T ss_pred CCCCHHHHHHHHHhCCEEEeCccccccCcchhhHheeecCCCCCEEeeCC---cCchhh---hcCCeEEECC--CCHHHH
Confidence 35666654433 8999999887 54 567799999999 4554332 222222 23 5777764 368899
Q ss_pred HHHHHHHhc
Q psy10186 111 AWATSIVLN 119 (124)
Q Consensus 111 ~~~l~~ll~ 119 (124)
+++|.++++
T Consensus 434 A~AI~~aL~ 442 (797)
T PLN03063 434 SSAIKEALN 442 (797)
T ss_pred HHHHHHHHh
Confidence 999999887
>PLN02929 NADH kinase
Back Show alignment and domain information
Probab=90.47 E-value=0.89 Score=32.71 Aligned_cols=96 Identities=17% Similarity=0.220 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHhhCCCeEEEEEcCCCCCCCCCcEEEeeccChHHhhcCCCcceEEecCChhhHHHHHHh---CCCeeeec
Q psy10186 3 DGMRTLLVTAFSRTGLTVLWRYEGDSIENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHY---GIPIIGVP 79 (124)
Q Consensus 3 ~~~~~~~~~~l~~~~~~~i~~~g~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~---g~P~l~~P 79 (124)
.+.++.+.+.|.+.++.+..+.. .+. .... ..+|++|+-||-||++.+++. ++|++.+-
T Consensus 33 ~~~~~~~~~~L~~~gi~~~~v~r-~~~---------------~~~~--~~~Dlvi~lGGDGT~L~aa~~~~~~iPvlGIN 94 (301)
T PLN02929 33 KDTVNFCKDILQQKSVDWECVLR-NEL---------------SQPI--RDVDLVVAVGGDGTLLQASHFLDDSIPVLGVN 94 (301)
T ss_pred HHHHHHHHHHHHHcCCEEEEeec-ccc---------------cccc--CCCCEEEEECCcHHHHHHHHHcCCCCcEEEEE
Confidence 45566666777777776633321 110 1112 578999999999999998654 68999984
Q ss_pred ccc------cHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcC
Q psy10186 80 FYG------DQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNN 120 (124)
Q Consensus 80 ~~~------~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~ 120 (124)
... +++.+... +....|.... .+.+++.++++++++.
T Consensus 95 ~Gp~~~~~~~~~~~~~~-~~r~lGfL~~---~~~~~~~~~L~~il~g 137 (301)
T PLN02929 95 SDPTQKDEVEEYSDEFD-ARRSTGHLCA---ATAEDFEQVLDDVLFG 137 (301)
T ss_pred CCCcccccccccccccc-cccCcccccc---CCHHHHHHHHHHHHcC
Confidence 431 12222211 1123555553 4688899999998864
>PLN02935 Bifunctional NADH kinase/NAD(+) kinase
Back Show alignment and domain information
Probab=89.90 E-value=1.3 Score=34.12 Aligned_cols=54 Identities=19% Similarity=0.183 Sum_probs=37.4
Q ss_pred CCcceEEecCChhhHHHHHHh----CCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcC
Q psy10186 51 PNCRLFISHGGVNSALEAIHY----GIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNN 120 (124)
Q Consensus 51 ~~~d~~i~~gG~~t~~ea~~~----g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~ 120 (124)
..+|++|+=||-||++.++.. ++|++.+.. ..+|-. .+++.+++.++|++++++
T Consensus 261 ~~~DlVIsiGGDGTlL~Aar~~~~~~iPILGIN~-------------G~LGFL---t~i~~~e~~~~Le~il~G 318 (508)
T PLN02935 261 TKVDLVITLGGDGTVLWAASMFKGPVPPVVPFSM-------------GSLGFM---TPFHSEQYRDCLDAILKG 318 (508)
T ss_pred cCCCEEEEECCcHHHHHHHHHhccCCCcEEEEeC-------------CCccee---cccCHHHHHHHHHHHHcC
Confidence 468999999999999999774 467777621 113332 234677777777777654
>PF11071 DUF2872: Protein of unknown function (DUF2872); InterPro: IPR019884 This entry represents a family of uncharacterised proteins, including YtoQ from Bacillus subtilis
Back Show alignment and domain information
Probab=89.83 E-value=3.5 Score=26.01 Aligned_cols=106 Identities=18% Similarity=0.222 Sum_probs=59.7
Q ss_pred CHHHHHHHHHHHhhCCCeEEEEEcCCC-----------CCCCCCcEEEee-------ccChHHhhcCCCcceEEecCC--
Q psy10186 2 SDGMRTLLVTAFSRTGLTVLWRYEGDS-----------IENLPGNVHIRK-------WIPQQDVLAHPNCRLFISHGG-- 61 (124)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~i~~~g~~~-----------~~~~~~~v~~~~-------~~~~~~~l~~~~~d~~i~~gG-- 61 (124)
..++-++|.+.....+..+.+...-.+ +...+.+ .+.+ .+...-++ .+||++|-.=|
T Consensus 7 HtdWRe~I~~ga~~~~L~v~F~~PvtdH~~SD~~G~~iLG~e~~~-fw~D~k~a~iN~iRT~~li--~~aDvVVvrFGek 83 (141)
T PF11071_consen 7 HTDWREEIKEGAKAAGLPVEFTSPVTDHEASDDCGVDILGEEPNK-FWRDHKGAKINAIRTRTLI--EKADVVVVRFGEK 83 (141)
T ss_pred cchHHHHHHHHHHHcCCCeEEecCCCCchhhhhhhHHHhCCCCcc-ccccchhhhhhHHHHHHHH--hhCCEEEEEechH
Confidence 346678888888865554443322111 1112222 2222 22334455 89999999887
Q ss_pred ---hhhHHHH---HHhCCCeeeecccccHHHHHHHHHHcC-ce-eEecCCCCCHHHHHHHHHHHh
Q psy10186 62 ---VNSALEA---IHYGIPIIGVPFYGDQLSHVRHIVDLG-AG-VELSYFNITLESIAWATSIVL 118 (124)
Q Consensus 62 ---~~t~~ea---~~~g~P~l~~P~~~~q~~~a~~~~~~g-~g-~~~~~~~~~~~~l~~~l~~ll 118 (124)
||+.+.| ++.|||.|++ ..+...+-+.+.. .+ .+.. +.+++.+.|+.++
T Consensus 84 YKQWNaAfDAg~a~AlgKplI~l----h~~~~~HpLKEvda~A~a~~e----t~~Qvv~iL~Yv~ 140 (141)
T PF11071_consen 84 YKQWNAAFDAGYAAALGKPLITL----HPEELHHPLKEVDAAALAVAE----TPEQVVEILRYVL 140 (141)
T ss_pred HHHHHHHhhHHHHHHcCCCeEEe----cchhccccHHHHhHhhHhhhC----CHHHHHHHHHHHh
Confidence 6777754 7899999998 2222223333331 11 2333 6788888777665
This family shows some sequence similarity to a family of nucleoside 2-deoxyribosyltransferases (COG3613 as iterated through CDD), but sufficiently remote that PSI-BLAST starting from YtoQ and exploring outwards does not discover the relationship.
>PRK14076 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Back Show alignment and domain information
Probab=89.79 E-value=1.1 Score=34.92 Aligned_cols=54 Identities=26% Similarity=0.306 Sum_probs=38.2
Q ss_pred CCcceEEecCChhhHHHHHHh----CCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcC
Q psy10186 51 PNCRLFISHGGVNSALEAIHY----GIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNN 120 (124)
Q Consensus 51 ~~~d~~i~~gG~~t~~ea~~~----g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~ 120 (124)
..+|++|+-||-||++.+++. ++|++.+-.. .+|-.. +++.+++.+.++++++.
T Consensus 347 ~~~dlvi~lGGDGT~L~aa~~~~~~~~PilGin~G-------------~lGFL~---~~~~~~~~~~l~~~~~g 404 (569)
T PRK14076 347 EEISHIISIGGDGTVLRASKLVNGEEIPIICINMG-------------TVGFLT---EFSKEEIFKAIDSIISG 404 (569)
T ss_pred cCCCEEEEECCcHHHHHHHHHhcCCCCCEEEEcCC-------------CCCcCc---ccCHHHHHHHHHHHHcC
Confidence 358999999999999999774 7798887331 123222 34677777777777754
>COG4370 Uncharacterized protein conserved in bacteria [Function unknown]
Back Show alignment and domain information
Probab=89.64 E-value=0.49 Score=34.30 Aligned_cols=81 Identities=25% Similarity=0.324 Sum_probs=49.2
Q ss_pred EeeccChHHhhcCCCcceEEecCChhhHHHHHHhCCCeeeecccccHHH--HHHHHHHc-CceeEecCCCCCHHHHHHHH
Q psy10186 38 IRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQLS--HVRHIVDL-GAGVELSYFNITLESIAWAT 114 (124)
Q Consensus 38 ~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~g~P~l~~P~~~~q~~--~a~~~~~~-g~g~~~~~~~~~~~~l~~~l 114 (124)
+..+-.+.+++ -.+|+.|-.+|. .+-.+.=.|||+|.+|-.+-|+. .|++=.++ |+.+.+-.+ ....-..+.
T Consensus 299 ~lsqqsfadiL--H~adaalgmAGT-AtEQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltlv~~--~aq~a~~~~ 373 (412)
T COG4370 299 WLSQQSFADIL--HAADAALGMAGT-ATEQAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTLVRP--EAQAAAQAV 373 (412)
T ss_pred EEeHHHHHHHH--HHHHHHHHhccc-hHHHhhccCCceeecCCCCCCcChHHHHHHHHHhcceeeecCC--chhhHHHHH
Confidence 34444455555 346666655554 34456778999999999887754 55555554 888776532 223333344
Q ss_pred HHHhcCCCC
Q psy10186 115 SIVLNNPRR 123 (124)
Q Consensus 115 ~~ll~~~~~ 123 (124)
++++.|+.+
T Consensus 374 q~ll~dp~r 382 (412)
T COG4370 374 QELLGDPQR 382 (412)
T ss_pred HHHhcChHH
Confidence 447877754
>PRK03708 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Back Show alignment and domain information
Probab=89.21 E-value=1.5 Score=31.16 Aligned_cols=70 Identities=20% Similarity=0.265 Sum_probs=41.7
Q ss_pred HHHHHHHHHHhhCCCeEEEEEcCCCCCCCCCcEEEeeccChHHhhcCCCcceEEecCChhhHHHHHHh---CCCeeeecc
Q psy10186 4 GMRTLLVTAFSRTGLTVLWRYEGDSIENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHY---GIPIIGVPF 80 (124)
Q Consensus 4 ~~~~~~~~~l~~~~~~~i~~~g~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~---g~P~l~~P~ 80 (124)
+...++.+.|.+.+..+.+...... ..+ ... ......... ..+|++|+-||-||+++++.. ++|++.+|.
T Consensus 16 ~~~~~I~~~L~~~g~~v~v~~~~~~--~~~-~~~---~~~~~~~~~-~~~d~vi~iGGDGTlL~a~~~~~~~~pi~gIn~ 88 (277)
T PRK03708 16 KLAYRVYDFLKVSGYEVVVDSETYE--HLP-EFS---EEDVLPLEE-MDVDFIIAIGGDGTILRIEHKTKKDIPILGINM 88 (277)
T ss_pred HHHHHHHHHHHHCCCEEEEecchhh--hcC-ccc---ccccccccc-cCCCEEEEEeCcHHHHHHHHhcCCCCeEEEEeC
Confidence 4567777788888888776421110 000 000 001011111 368999999999999999853 458888864
>TIGR00730 conserved hypothetical protein, DprA/Smf-related, family 2
Back Show alignment and domain information
Probab=88.55 E-value=5.3 Score=26.43 Aligned_cols=51 Identities=18% Similarity=0.277 Sum_probs=30.6
Q ss_pred hHHhhcCCCcceE-EecCChhhHHHHHH---------hCCCeeeecc---cccHHHHHHHHHHcC
Q psy10186 44 QQDVLAHPNCRLF-ISHGGVNSALEAIH---------YGIPIIGVPF---YGDQLSHVRHIVDLG 95 (124)
Q Consensus 44 ~~~~l~~~~~d~~-i~~gG~~t~~ea~~---------~g~P~l~~P~---~~~q~~~a~~~~~~g 95 (124)
....+. ..+|+| +-.||.||+-|.+. +.+|++++-. +.+-....+.+.+.|
T Consensus 89 Rk~~m~-~~sda~I~lPGG~GTL~El~e~~~~~qlg~~~kPiil~n~~g~~~~l~~~l~~~~~~g 152 (178)
T TIGR00730 89 RKAMMA-ELADAFIAMPGGFGTLEELFEVLTWAQLGIHQKPIILFNVNGHFDGLVEWLKYSIQEG 152 (178)
T ss_pred HHHHHH-HhCCEEEEcCCCcchHHHHHHHHHHHHcCCCCCCEEEECCcchHHHHHHHHHHHHHCC
Confidence 344444 678886 45667899988743 4999999732 222233344555555
This model represents one branch of a subfamily of proteins of unknown function. Both PSI-BLAST and weak hits by this model show a low level of similarity to and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting that the branches may have distinct functions.
>PRK02645 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Back Show alignment and domain information
Probab=88.51 E-value=3.2 Score=29.87 Aligned_cols=67 Identities=22% Similarity=0.206 Sum_probs=42.3
Q ss_pred HHHHHHHHHHhhCCCeEEEEEcCCCCCCCCCcEEEeeccChHHhhcCCCcceEEecCChhhHHHHHHh----CCCeeeec
Q psy10186 4 GMRTLLVTAFSRTGLTVLWRYEGDSIENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHY----GIPIIGVP 79 (124)
Q Consensus 4 ~~~~~~~~~l~~~~~~~i~~~g~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~----g~P~l~~P 79 (124)
+.+.++.+.|.+.++.+.+...... ..+. . ... ...- ..+|++|+-||-||+++++.. ++|++.+.
T Consensus 19 ~~~~~i~~~L~~~g~~v~v~~~~~~--~~~~--~---~~~-~~~~--~~~d~vi~~GGDGT~l~~~~~~~~~~~pv~gin 88 (305)
T PRK02645 19 EAAERCAKQLEARGCKVLMGPSGPK--DNPY--P---VFL-ASAS--ELIDLAIVLGGDGTVLAAARHLAPHDIPILSVN 88 (305)
T ss_pred HHHHHHHHHHHHCCCEEEEecCchh--hccc--c---chh-hccc--cCcCEEEEECCcHHHHHHHHHhccCCCCEEEEe
Confidence 4566777778788887655432111 1110 0 111 1111 568999999999999999864 78998885
Q ss_pred c
Q psy10186 80 F 80 (124)
Q Consensus 80 ~ 80 (124)
.
T Consensus 89 ~ 89 (305)
T PRK02645 89 V 89 (305)
T ss_pred c
Confidence 4
>PF15024 Glyco_transf_18: Glycosyltransferase family 18
Back Show alignment and domain information
Probab=87.83 E-value=3.3 Score=32.36 Aligned_cols=90 Identities=19% Similarity=0.186 Sum_probs=57.4
Q ss_pred CCCCCcEEEeeccChHHhhcC-CCcceEEecCC---hhhHHHHHHhCCCeeeecccc--------------------cHH
Q psy10186 30 ENLPGNVHIRKWIPQQDVLAH-PNCRLFISHGG---VNSALEAIHYGIPIIGVPFYG--------------------DQL 85 (124)
Q Consensus 30 ~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~~gG---~~t~~ea~~~g~P~l~~P~~~--------------------~q~ 85 (124)
...|.-|.-++.+++.++... +++.++|-=|. .-+.+||+++|+|.|---... .|.
T Consensus 318 ~~~P~~V~NHG~l~~~ef~~lL~~akvfiGlGfP~EgPaPlEAia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQh 397 (559)
T PF15024_consen 318 PNVPSFVKNHGILSGDEFQQLLRKAKVFIGLGFPYEGPAPLEAIANGCVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQH 397 (559)
T ss_pred cccchhhhhcCcCCHHHHHHHHHhhhEeeecCCCCCCCChHHHHHcCCccccccCCCCCcccccccccCCCCcceeccCC
Confidence 345666666777776663332 88999998885 358999999999988631110 122
Q ss_pred HHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCC
Q psy10186 86 SHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNP 121 (124)
Q Consensus 86 ~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~ 121 (124)
.-++. ..|-=.+..-+.-+.+++.++|++++..+
T Consensus 398 PY~e~--~iG~PhVytVd~~n~~~v~~Avk~il~~~ 431 (559)
T PF15024_consen 398 PYAEE--FIGEPHVYTVDINNSTEVEAAVKAILATP 431 (559)
T ss_pred hHHHh--hCCCCeEEEEcCCCHHHHHHHHHHHHhcC
Confidence 22221 12433333334457999999999999765
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Back Show alignment and domain information
Probab=86.72 E-value=8 Score=29.84 Aligned_cols=110 Identities=19% Similarity=0.220 Sum_probs=69.6
Q ss_pred HHHHHHHHHHhhCCCeEEEEEcCCC-C--------CCCCCcEEEeeccCh-HHhhcCCCcceEEecC-----ChhhHHHH
Q psy10186 4 GMRTLLVTAFSRTGLTVLWRYEGDS-I--------ENLPGNVHIRKWIPQ-QDVLAHPNCRLFISHG-----GVNSALEA 68 (124)
Q Consensus 4 ~~~~~~~~~l~~~~~~~i~~~g~~~-~--------~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~g-----G~~t~~ea 68 (124)
+.+.+.++.+-+.+.++++...++. . ...+.++.+.-+++. .....++.+|.++..+ |. |=+++
T Consensus 310 dl~~~~i~~~l~~~~~~vilG~gd~~le~~~~~la~~~~~~~~~~i~~~~~la~~i~agaD~~lmPSrfEPcGL-~ql~a 388 (487)
T COG0297 310 DLLLEAIDELLEQGWQLVLLGTGDPELEEALRALASRHPGRVLVVIGYDEPLAHLIYAGADVILMPSRFEPCGL-TQLYA 388 (487)
T ss_pred hHHHHHHHHHHHhCceEEEEecCcHHHHHHHHHHHHhcCceEEEEeeecHHHHHHHHhcCCEEEeCCcCcCCcH-HHHHH
Confidence 3455556656556677766544432 1 124556766665553 3333348999988765 44 78899
Q ss_pred HHhCCCeeeecccc--c----HHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHh
Q psy10186 69 IHYGIPIIGVPFYG--D----QLSHVRHIVDLGAGVELSYFNITLESIAWATSIVL 118 (124)
Q Consensus 69 ~~~g~P~l~~P~~~--~----q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll 118 (124)
+++|.+.|+.+..+ | -..+. ....|.|..+.+. +++++..++++-+
T Consensus 389 mryGtvpIv~~tGGLadTV~~~~~~~--~~~~gtGf~f~~~--~~~~l~~al~rA~ 440 (487)
T COG0297 389 MRYGTLPIVRETGGLADTVVDRNEWL--IQGVGTGFLFLQT--NPDHLANALRRAL 440 (487)
T ss_pred HHcCCcceEcccCCccceecCccchh--ccCceeEEEEecC--CHHHHHHHHHHHH
Confidence 99999887776642 2 22222 4556888888643 8999999888754
>TIGR03646 YtoQ_fam YtoQ family protein
Back Show alignment and domain information
Probab=85.75 E-value=6.9 Score=24.77 Aligned_cols=106 Identities=15% Similarity=0.187 Sum_probs=57.5
Q ss_pred CHHHHHHHHHHHhhCC--CeEEEEEcCCC---------CCCCCCcEEEee-------ccChHHhhcCCCcceEEecCC--
Q psy10186 2 SDGMRTLLVTAFSRTG--LTVLWRYEGDS---------IENLPGNVHIRK-------WIPQQDVLAHPNCRLFISHGG-- 61 (124)
Q Consensus 2 ~~~~~~~~~~~l~~~~--~~~i~~~g~~~---------~~~~~~~v~~~~-------~~~~~~~l~~~~~d~~i~~gG-- 61 (124)
..++-++|.++..+.+ +.|.--+-... +...+.+ .+.+ -+...-++ ..||++|-.=|
T Consensus 10 HtdWRe~I~~ga~~~~L~v~F~~pvtdH~aSD~~G~~iLG~e~~~-fw~D~k~a~iNaiRT~~li--~~aDvvVvrFGek 86 (144)
T TIGR03646 10 HTDWREEIKEGAKSKNLPIVFSGPVTDHEASDNIGEDILGKQPSN-FWRDDAAASINNIRTRKLI--EKADVVIALFGEK 86 (144)
T ss_pred cchHHHHHHHHHHHcCCCeEEecCCCCCcchhhhhHHHhCCCCcc-ccccccccchhhHHHHHHH--hhCCEEEEEechH
Confidence 3466788888888554 45433221111 1112222 2222 23344455 89999998887
Q ss_pred ---hhhHHHH---HHhCCCeeeecccccHHHHHHHHHHc-Cce-eEecCCCCCHHHHHHHHHHHh
Q psy10186 62 ---VNSALEA---IHYGIPIIGVPFYGDQLSHVRHIVDL-GAG-VELSYFNITLESIAWATSIVL 118 (124)
Q Consensus 62 ---~~t~~ea---~~~g~P~l~~P~~~~q~~~a~~~~~~-g~g-~~~~~~~~~~~~l~~~l~~ll 118 (124)
||+.+.| ++.|||.|++- .+...+-+.+. ..+ .+.. +.+++.+.|+.++
T Consensus 87 YKQWNaAfDAg~aaAlgKplI~lh----~~~~~HpLKEvdaaA~avae----tp~Qvv~iL~Yv~ 143 (144)
T TIGR03646 87 YKQWNAAFDAGYAAALGKPLIILR----PEELIHPLKEVDNKAQAVVE----TPEQAIETLKYIL 143 (144)
T ss_pred HHHHHHHhhHHHHHHcCCCeEEec----chhccccHHHHhHHHHHHhc----CHHHHHHHHHHhh
Confidence 6777654 78899999982 22222222222 111 1222 6777777776654
Members of this family are uncharacterized proteins, including YtoQ from Bacillus subtilis. This family shows some sequence similarity to a family of nucleoside 2-deoxyribosyltransferases (COG3613 as iterated through CDD), but sufficiently remote that PSI-BLAST starting from YtoQ and exploring outwards does not discover the relationship.
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Back Show alignment and domain information
Probab=85.43 E-value=0.65 Score=37.25 Aligned_cols=77 Identities=14% Similarity=0.147 Sum_probs=50.5
Q ss_pred EEeeccChHHhhcC-CCcceEEecC---C-hhhHHHHHHhCCC---eeeecccccHHHHHHHHHHcCceeEecCCCCCHH
Q psy10186 37 HIRKWIPQQDVLAH-PNCRLFISHG---G-VNSALEAIHYGIP---IIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLE 108 (124)
Q Consensus 37 ~~~~~~~~~~~l~~-~~~d~~i~~g---G-~~t~~ea~~~g~P---~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~ 108 (124)
.+.+++++.++... +.+|+++..+ | ..++.|++++|+| .+++. +...-+..+. .|+.+++ .+.+
T Consensus 345 ~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls---~~~G~~~~l~---~~llv~P--~d~~ 416 (726)
T PRK14501 345 YFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRTDGDGVLILS---EMAGAAAELA---EALLVNP--NDIE 416 (726)
T ss_pred EEeCCCCHHHHHHHHHhccEEEecccccccCcccceEEEEcCCCCceEEEe---cccchhHHhC---cCeEECC--CCHH
Confidence 45567888775544 8999999876 4 4578899999775 33332 2212222222 3677765 3588
Q ss_pred HHHHHHHHHhcCC
Q psy10186 109 SIAWATSIVLNNP 121 (124)
Q Consensus 109 ~l~~~l~~ll~~~ 121 (124)
+++++|.++++.+
T Consensus 417 ~la~ai~~~l~~~ 429 (726)
T PRK14501 417 GIAAAIKRALEMP 429 (726)
T ss_pred HHHHHHHHHHcCC
Confidence 8999999988754
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Back Show alignment and domain information
Probab=84.63 E-value=11 Score=27.46 Aligned_cols=72 Identities=13% Similarity=0.139 Sum_probs=45.7
Q ss_pred HHHHHHHhhCCCeEEEEEcCCCCCC--CCC-cE--EEe---ecc---C----------------hHHhhcCCCcceEEec
Q psy10186 7 TLLVTAFSRTGLTVLWRYEGDSIEN--LPG-NV--HIR---KWI---P----------------QQDVLAHPNCRLFISH 59 (124)
Q Consensus 7 ~~~~~~l~~~~~~~i~~~g~~~~~~--~~~-~v--~~~---~~~---~----------------~~~~l~~~~~d~~i~~ 59 (124)
.++++.|.+.+++++|+......+. .+. ++ ... ++- + -..++...+-|+++++
T Consensus 19 la~a~~l~~~g~~v~~vg~~~~~e~~l~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPdvvi~~ 98 (352)
T PRK12446 19 LAIIPYLKEDNWDISYIGSHQGIEKTIIEKENIPYYSISSGKLRRYFDLKNIKDPFLVMKGVMDAYVRIRKLKPDVIFSK 98 (352)
T ss_pred HHHHHHHHhCCCEEEEEECCCccccccCcccCCcEEEEeccCcCCCchHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEec
Confidence 3567788888899999875543211 111 11 111 110 0 0112334678999999
Q ss_pred CChhh---HHHHHHhCCCeeee
Q psy10186 60 GGVNS---ALEAIHYGIPIIGV 78 (124)
Q Consensus 60 gG~~t---~~ea~~~g~P~l~~ 78 (124)
||+-+ ++.|...|+|+++.
T Consensus 99 Ggy~s~p~~~aa~~~~~p~~i~ 120 (352)
T PRK12446 99 GGFVSVPVVIGGWLNRVPVLLH 120 (352)
T ss_pred CchhhHHHHHHHHHcCCCEEEE
Confidence 99975 89999999999986
>PRK04761 ppnK inorganic polyphosphate/ATP-NAD kinase; Reviewed
Back Show alignment and domain information
Probab=84.57 E-value=1.4 Score=30.73 Aligned_cols=30 Identities=23% Similarity=0.499 Sum_probs=25.1
Q ss_pred CCcceEEecCChhhHHHHHHh----CCCeeeecc
Q psy10186 51 PNCRLFISHGGVNSALEAIHY----GIPIIGVPF 80 (124)
Q Consensus 51 ~~~d~~i~~gG~~t~~ea~~~----g~P~l~~P~ 80 (124)
..+|++|+-||-||++.+++. ++|++.+..
T Consensus 24 ~~~Dlvi~iGGDGTlL~a~~~~~~~~~PvlGIN~ 57 (246)
T PRK04761 24 EEADVIVALGGDGFMLQTLHRYMNSGKPVYGMNR 57 (246)
T ss_pred ccCCEEEEECCCHHHHHHHHHhcCCCCeEEEEeC
Confidence 568999999999999988765 679888744
>PF06722 DUF1205: Protein of unknown function (DUF1205); InterPro: IPR010610 This entry represents a conserved region of unknown function within bacterial glycosyl transferases
Back Show alignment and domain information
Probab=84.49 E-value=4.3 Score=24.10 Aligned_cols=34 Identities=21% Similarity=0.311 Sum_probs=27.2
Q ss_pred HHHHHHHHHHhhCCCeEEEEEcCCC---CCCCCCcEE
Q psy10186 4 GMRTLLVTAFSRTGLTVLWRYEGDS---IENLPGNVH 37 (124)
Q Consensus 4 ~~~~~~~~~l~~~~~~~i~~~g~~~---~~~~~~~v~ 37 (124)
..+.++++++.+++..+|+..+... ....|+|++
T Consensus 61 ~~l~~ll~ala~ldvEvV~a~~~~~~~~lg~lP~nVR 97 (97)
T PF06722_consen 61 PLLRRLLEALAGLDVEVVVALPAAQRAELGELPDNVR 97 (97)
T ss_dssp CHHHHHHHHHHTSSSEEEEEETTCCCGGCCS-TTTEE
T ss_pred HHHHHHHHHHhhCCcEEEEECCHHHHHhhCCCCCCCC
Confidence 3688999999999999999998865 345788875
Many proteins containing this domain are members of the glycosyl transferase family 28 IPR004276 from INTERPRO.; PDB: 3OTH_A 3OTG_A 3OTI_A 3D0R_A 3D0Q_B 2P6P_A 3UYK_A 3UYL_B 3TSA_B 2YJN_A.
>KOG1111|consensus
Back Show alignment and domain information
Probab=84.14 E-value=6 Score=29.50 Aligned_cols=74 Identities=14% Similarity=0.211 Sum_probs=48.6
Q ss_pred HHHHHHHHH-hhC-CCeEEEEEcCCCC---------CCCCCcEEEeeccChHHhhcC-CCcceEEecCCh----hhHHHH
Q psy10186 5 MRTLLVTAF-SRT-GLTVLWRYEGDSI---------ENLPGNVHIRKWIPQQDVLAH-PNCRLFISHGGV----NSALEA 68 (124)
Q Consensus 5 ~~~~~~~~l-~~~-~~~~i~~~g~~~~---------~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~~gG~----~t~~ea 68 (124)
++.+++..+ .+. +++|++...+.+. ....+.+.+.+-+++.++-.- .+=|+|+..+=. .++.||
T Consensus 212 ll~~iIp~vc~~~p~vrfii~GDGPk~i~lee~lEk~~l~~rV~~lG~v~h~~Vr~vl~~G~IFlntSlTEafc~~ivEA 291 (426)
T KOG1111|consen 212 LLLEIIPSVCDKHPEVRFIIIGDGPKRIDLEEMLEKLFLQDRVVMLGTVPHDRVRDVLVRGDIFLNTSLTEAFCMVIVEA 291 (426)
T ss_pred HHHHHHHHHHhcCCCeeEEEecCCcccchHHHHHHHhhccCceEEecccchHHHHHHHhcCcEEeccHHHHHHHHHHHHH
Confidence 444555544 434 4688776544321 125677889999987663221 677888887742 467899
Q ss_pred HHhCCCeeee
Q psy10186 69 IHYGIPIIGV 78 (124)
Q Consensus 69 ~~~g~P~l~~ 78 (124)
+++|+|++.-
T Consensus 292 aScGL~VVsT 301 (426)
T KOG1111|consen 292 ASCGLPVVST 301 (426)
T ss_pred HhCCCEEEEe
Confidence 9999999973
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3
Back Show alignment and domain information
Probab=83.88 E-value=4.3 Score=32.14 Aligned_cols=69 Identities=16% Similarity=0.217 Sum_probs=39.1
Q ss_pred cChHHhhcCCCcceEEecC-----ChhhHHHHHHhCCCeeeecccccHHHHHHHH-------HHcCceeEecCCCCCHHH
Q psy10186 42 IPQQDVLAHPNCRLFISHG-----GVNSALEAIHYGIPIIGVPFYGDQLSHVRHI-------VDLGAGVELSYFNITLES 109 (124)
Q Consensus 42 ~~~~~~l~~~~~d~~i~~g-----G~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~-------~~~g~g~~~~~~~~~~~~ 109 (124)
++..+++ ..||+-|..+ |+ |.+|+.++|+|.|.--+. ....++ ...|+- +++..+-+.++
T Consensus 461 l~Y~dfv--~GcdLgvFPSYYEPWGY-TPlE~~a~gVPsITTnLs----GFG~~~~~~~~~~~~~GV~-VvdR~~~n~~e 532 (633)
T PF05693_consen 461 LDYYDFV--RGCDLGVFPSYYEPWGY-TPLECTAFGVPSITTNLS----GFGCWMQEHIEDPEEYGVY-VVDRRDKNYDE 532 (633)
T ss_dssp S-HHHHH--HHSSEEEE--SSBSS-H-HHHHHHHTT--EEEETTB----HHHHHHHTTS-HHGGGTEE-EE-SSSS-HHH
T ss_pred CCHHHHh--ccCceeeeccccccccC-ChHHHhhcCCceeeccch----hHHHHHHHhhccCcCCcEE-EEeCCCCCHHH
Confidence 3567777 7899999888 77 899999999999996332 222222 223443 34445556666
Q ss_pred HHHHHHHHh
Q psy10186 110 IAWATSIVL 118 (124)
Q Consensus 110 l~~~l~~ll 118 (124)
..+.+.+.+
T Consensus 533 ~v~~la~~l 541 (633)
T PF05693_consen 533 SVNQLADFL 541 (633)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666665554
Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase
Back Show alignment and domain information
Probab=82.93 E-value=5.1 Score=30.87 Aligned_cols=77 Identities=13% Similarity=0.093 Sum_probs=53.7
Q ss_pred EEEeeccChHHhhcC-CCcceEEecC---ChhhH-HHHHHhCC----CeeeecccccHHHHHHHHHHcCceeEecCCCCC
Q psy10186 36 VHIRKWIPQQDVLAH-PNCRLFISHG---GVNSA-LEAIHYGI----PIIGVPFYGDQLSHVRHIVDLGAGVELSYFNIT 106 (124)
Q Consensus 36 v~~~~~~~~~~~l~~-~~~d~~i~~g---G~~t~-~ea~~~g~----P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~ 106 (124)
+.+.+.+|..++.+. ..+|+++..+ |.|.+ .|.++++. |+|+- +--.-+ +.+.-++.++| .+
T Consensus 364 ~~~~~~v~~~el~alYr~ADV~lvT~lrDGmNLVa~Eyva~~~~~~GvLILS----efaGaa---~~l~~AllVNP--~d 434 (487)
T TIGR02398 364 QFFTRSLPYEEVSAWFAMADVMWITPLRDGLNLVAKEYVAAQGLLDGVLVLS----EFAGAA---VELKGALLTNP--YD 434 (487)
T ss_pred EEEcCCCCHHHHHHHHHhCCEEEECccccccCcchhhHHhhhcCCCCCEEEe----ccccch---hhcCCCEEECC--CC
Confidence 456778888876654 8999998887 76644 59999987 54442 322333 34445777765 47
Q ss_pred HHHHHHHHHHHhcCC
Q psy10186 107 LESIAWATSIVLNNP 121 (124)
Q Consensus 107 ~~~l~~~l~~ll~~~ 121 (124)
.++++++|.+.++.|
T Consensus 435 ~~~~A~ai~~AL~m~ 449 (487)
T TIGR02398 435 PVRMDETIYVALAMP 449 (487)
T ss_pred HHHHHHHHHHHHcCC
Confidence 899999999988765
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
>PRK00561 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Back Show alignment and domain information
Probab=82.28 E-value=5 Score=28.27 Aligned_cols=29 Identities=14% Similarity=0.281 Sum_probs=24.8
Q ss_pred CCcceEEecCChhhHHHHHH----hCCCeeeec
Q psy10186 51 PNCRLFISHGGVNSALEAIH----YGIPIIGVP 79 (124)
Q Consensus 51 ~~~d~~i~~gG~~t~~ea~~----~g~P~l~~P 79 (124)
..+|++|+=||-||++.+++ .++|++.+.
T Consensus 32 ~~~D~vi~iGGDGT~L~a~~~~~~~~iPilGIN 64 (259)
T PRK00561 32 DGADYLFVLGGDGFFVSTAANYNCAGCKVVGIN 64 (259)
T ss_pred CCCCEEEEECCcHHHHHHHHHhcCCCCcEEEEe
Confidence 56899999999999998875 467988874
>KOG2941|consensus
Back Show alignment and domain information
Probab=81.83 E-value=19 Score=26.88 Aligned_cols=108 Identities=14% Similarity=0.209 Sum_probs=67.3
Q ss_pred CHHHHHHHHHHHh---------hCCC-eEE-EEEcCCCCCC---------CCCcEE-EeeccC---hHHhhcCCCcceEE
Q psy10186 2 SDGMRTLLVTAFS---------RTGL-TVL-WRYEGDSIEN---------LPGNVH-IRKWIP---QQDVLAHPNCRLFI 57 (124)
Q Consensus 2 ~~~~~~~~~~~l~---------~~~~-~~i-~~~g~~~~~~---------~~~~v~-~~~~~~---~~~~l~~~~~d~~i 57 (124)
|+|-+.-+++++. ..++ +++ +++|+....+ .-.++. ...|.. .--++ ++||+-|
T Consensus 266 pDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKGPlkE~Y~~~I~~~~~~~v~~~tpWL~aEDYP~ll--~saDlGV 343 (444)
T KOG2941|consen 266 PDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKGPLKEKYSQEIHEKNLQHVQVCTPWLEAEDYPKLL--ASADLGV 343 (444)
T ss_pred CcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCCchhHHHHHHHHHhcccceeeeecccccccchhHh--hccccce
Confidence 4556666666665 2222 344 4556544221 123343 345654 33356 6788744
Q ss_pred --ecCCh-----hhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhc
Q psy10186 58 --SHGGV-----NSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLN 119 (124)
Q Consensus 58 --~~gG~-----~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~ 119 (124)
+.+.. .-+.+-.=+|+|++.+ +....-+.+++...|.++. +++++.+.++-+++
T Consensus 344 cLHtSSSGLDLPMKVVDMFGcglPvcA~----~fkcl~ELVkh~eNGlvF~----Ds~eLa~ql~~lf~ 404 (444)
T KOG2941|consen 344 CLHTSSSGLDLPMKVVDMFGCGLPVCAV----NFKCLDELVKHGENGLVFE----DSEELAEQLQMLFK 404 (444)
T ss_pred EeeecCcccCcchhHHHhhcCCCceeee----cchhHHHHHhcCCCceEec----cHHHHHHHHHHHHh
Confidence 34433 3466777889999997 5566666777778999998 89999998888876
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []
Back Show alignment and domain information
Probab=80.63 E-value=0.72 Score=30.28 Aligned_cols=33 Identities=27% Similarity=0.556 Sum_probs=23.5
Q ss_pred cCCCcceEEecCChhhHHHHHHhCCCeeeecccc
Q psy10186 49 AHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYG 82 (124)
Q Consensus 49 ~~~~~d~~i~~gG~~t~~ea~~~g~P~l~~P~~~ 82 (124)
....+|++||+||....+.... ++|++-+|...
T Consensus 31 ~~~g~dViIsRG~ta~~lr~~~-~iPVV~I~~s~ 63 (176)
T PF06506_consen 31 ESEGADVIISRGGTAELLRKHV-SIPVVEIPISG 63 (176)
T ss_dssp TTTT-SEEEEEHHHHHHHHCC--SS-EEEE---H
T ss_pred HhcCCeEEEECCHHHHHHHHhC-CCCEEEECCCH
Confidence 4489999999999988888877 99999998753
Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Back Show alignment and domain information
Probab=80.44 E-value=16 Score=25.78 Aligned_cols=75 Identities=15% Similarity=0.191 Sum_probs=46.9
Q ss_pred HHHHHHHHhhCCCeEEEEEcCCCCC---CC-------------------------C-CcEE-EeeccC---hHHhhcCCC
Q psy10186 6 RTLLVTAFSRTGLTVLWRYEGDSIE---NL-------------------------P-GNVH-IRKWIP---QQDVLAHPN 52 (124)
Q Consensus 6 ~~~~~~~l~~~~~~~i~~~g~~~~~---~~-------------------------~-~~v~-~~~~~~---~~~~l~~~~ 52 (124)
+++.++.+.+.+-+++..+|.++.. .. + .++. ..+.+. ...++...+
T Consensus 117 ~~ea~~~~~~~~~rVflt~G~~~l~~f~~~~~~~~~~~Rvlp~~~~~~~~~~~~~p~~~Iia~~GPfs~~~n~all~q~~ 196 (257)
T COG2099 117 IEEAAEAAKQLGRRVFLTTGRQNLAHFVAADAHSHVLARVLPPPDVLAKCEDLGVPPARIIAMRGPFSEEDNKALLEQYR 196 (257)
T ss_pred HHHHHHHHhccCCcEEEecCccchHHHhcCcccceEEEEEcCchHHHHHHHhcCCChhhEEEecCCcChHHHHHHHHHhC
Confidence 5667777778888888888886521 11 1 1111 111121 222343478
Q ss_pred cceEEecCChhh------HHHHHHhCCCeeeecc
Q psy10186 53 CRLFISHGGVNS------ALEAIHYGIPIIGVPF 80 (124)
Q Consensus 53 ~d~~i~~gG~~t------~~ea~~~g~P~l~~P~ 80 (124)
+|++||.-..++ +.-|...|+|+|++-+
T Consensus 197 id~vItK~SG~~Gg~~~Ki~aA~eLgi~VI~I~R 230 (257)
T COG2099 197 IDVVVTKNSGGAGGTYEKIEAARELGIPVIMIER 230 (257)
T ss_pred CCEEEEccCCcccCcHHHHHHHHHcCCcEEEEec
Confidence 999999876555 6678899999999833
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
ID Alignment Graph Length
Definition
E-value
Query
124
d1iira_ 401
c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycol
7e-22
d1rrva_ 401
c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Am
1e-20
d2c1xa1 450
c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-gluc
1e-20
d2pq6a1 473
c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransfe
1e-20
d2vcha1 471
c.87.1.10 (A:6-476) Hydroquinone glucosyltransfera
4e-18
d2acva1 461
c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transf
3e-17
d1pn3a_ 391
c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA
1e-16
>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} Length = 401
Back Hide information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: UDP-glucosyltransferase GtfB
species: Amycolatopsis orientalis [TaxId: 31958]
Score = 86.7 bits (213), Expect = 7e-22
Identities = 22/125 (17%), Positives = 40/125 (32%), Gaps = 4/125 (3%)
Query: 1 MSDGMRTLLVTAFSRTGL--TVLWRYEGDSIENLPGNVHIRKWIPQQDVLAHPNCRLFIS 58
+ + A G + + + + + + Q + I
Sbjct: 250 APADAVRVAIDAIRAHGRRVILSRGWADLVLPDDGADCFAIGEVNHQVLFGR--VAAVIH 307
Query: 59 HGGVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVL 118
HGG + A G P I +P DQ + + +LG GV T +S++ A + L
Sbjct: 308 HGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPIPTFDSLSAALATAL 367
Query: 119 NNPRR 123
Sbjct: 368 TPETH 372
>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} Length = 401
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-vancosaminyltransferase GftD
species: Amycolatopsis orientalis [TaxId: 31958]
Score = 83.6 bits (205), Expect = 1e-20
Identities = 21/112 (18%), Positives = 37/112 (33%), Gaps = 2/112 (1%)
Query: 12 AFSRTGLTVLWRYEGDSIENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHY 71
+ + + + + + + Q + I HG + A
Sbjct: 264 RAQGRRVILSRGWTELVLPDDRDDCFAIDEVNFQALFRR--VAAVIHHGSAGTEHVATRA 321
Query: 72 GIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPRR 123
G+P + +P DQ + LG GV T ES++ A + VL R
Sbjct: 322 GVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTPTFESLSAALTTVLAPETR 373
>d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} Length = 450
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: UDP glucose:flavonoid 3-o-glucosyltransferase
species: Grape (Vitis vinifera) [TaxId: 29760]
Score = 83.6 bits (205), Expect = 1e-20
Identities = 34/131 (25%), Positives = 55/131 (41%), Gaps = 9/131 (6%)
Query: 1 MSDGMRTLLVTAFSRTGLTVLWRYEGDSIENLP--------GNVHIRKWIPQQDVLAHPN 52
L A + + +W + +LP G + W PQ +VLAH
Sbjct: 278 PPPAEVVALSEALEASRVPFIWSLRDKARVHLPEGFLEKTRGYGMVVPWAPQAEVLAHEA 337
Query: 53 CRLFISHGGVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVD-LGAGVELSYFNITLESIA 111
F++H G NS E++ G+P+I PF+GDQ + R + D L GV + T +
Sbjct: 338 VGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVFTKSGLM 397
Query: 112 WATSIVLNNPR 122
+L+ +
Sbjct: 398 SCFDQILSQEK 408
>d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} Length = 473
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: (Iso)flavonoid glycosyltransferase
species: Medicago truncatula [TaxId: 3880]
Score = 83.7 bits (205), Expect = 1e-20
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
Query: 22 WRYEGDSIENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFY 81
+ + + I W PQ VL HP+ F++H G NS E+I G+P++ PF+
Sbjct: 334 VIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFF 393
Query: 82 GDQLSHVRHIVD-LGAGVELSYFNITLESIAWATSIVLNNPR 122
DQ + R I + G+E+ N+ E +A + V+ +
Sbjct: 394 ADQPTDCRFICNEWEIGMEIDT-NVKREELAKLINEVIAGDK 434
>d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 471
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: Hydroquinone glucosyltransferase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 76.3 bits (186), Expect = 4e-18
Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 4/102 (3%)
Query: 25 EGDSIENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQ 84
G I W PQ VLAHP+ F++H G NS LE++ GIP+I P Y +Q
Sbjct: 325 PGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQ 384
Query: 85 LSHVRHIVD-LGAGVELS---YFNITLESIAWATSIVLNNPR 122
+ + + + A + + E +A ++
Sbjct: 385 KMNAVLLSEDIRAALRPRAGDDGLVRREEVARVVKGLMEGEE 426
>d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} Length = 461
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: Triterpene UDP-glucosyl transferase UGT71G1
species: Medicago truncatula [TaxId: 3880]
Score = 73.6 bits (179), Expect = 3e-17
Identities = 33/140 (23%), Positives = 52/140 (37%), Gaps = 16/140 (11%)
Query: 1 MSDGMRTLLVTAFSRTGLTVLWRYEGD---------SIENLPGNVHIRKWIPQQDVLAHP 51
+ +G+ LW + L G I W PQ +VLAH
Sbjct: 288 FGPSQIREIALGLKHSGVRFLWSNSAEKKVFPEGFLEWMELEGKGMICGWAPQVEVLAHK 347
Query: 52 NCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVD-LGAGVELSY------FN 104
F+SH G NS LE++ +G+PI+ P Y +Q + +V G G+ L
Sbjct: 348 AIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDV 407
Query: 105 ITLESIAWATSIVLNNPRRY 124
+ E I +++
Sbjct: 408 VAAEEIEKGLKDLMDKDSIV 427
>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} Length = 391
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-epi-vancosaminyltransferase GtfA
species: Amycolatopsis orientalis [TaxId: 31958]
Score = 72.4 bits (176), Expect = 1e-16
Identities = 22/129 (17%), Positives = 45/129 (34%), Gaps = 8/129 (6%)
Query: 1 MSDGMRTLLVTAFSRTGLTVLWRYEG--DSIENLPGNVHIRKWIPQQDVLAHPNCRLFIS 58
+ + + A +G ++ + + + + + Q++ I
Sbjct: 235 ATADAAKMAIKAVRASGRRIVLSRGWADLVLPDDGADCFVVGEVNLQELFGR--VAAAIH 292
Query: 59 HGGVNSALEAIHYGIPIIGVPFYGDQLSH----VRHIVDLGAGVELSYFNITLESIAWAT 114
H + L A+ GIP I V D + + +LG GV + T++S++ A
Sbjct: 293 HDSAGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRVAELGVGVAVDGPVPTIDSLSAAL 352
Query: 115 SIVLNNPRR 123
L R
Sbjct: 353 DTALAPEIR 361
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
ID Alignment Graph Length
Definition
Probability
Query 124
d2c1xa1 450
UDP glucose:flavonoid 3-o-glucosyltransferase {Gra
99.96
d2pq6a1 473
(Iso)flavonoid glycosyltransferase {Medicago trunc
99.95
d2vcha1 471
Hydroquinone glucosyltransferase {Thale cress (Ara
99.95
d2acva1 461
Triterpene UDP-glucosyl transferase UGT71G1 {Medic
99.94
d1iira_ 401
UDP-glucosyltransferase GtfB {Amycolatopsis orient
99.94
d1rrva_ 401
TDP-vancosaminyltransferase GftD {Amycolatopsis or
99.94
d1pn3a_ 391
TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi
99.91
d1f0ka_ 351
Peptidoglycan biosynthesis glycosyltransferase Mur
99.75
d2f9fa1 166
First mannosyl transferase WbaZ {Archaeoglobus ful
98.72
d2iw1a1 370
Lipopolysaccharide core biosynthesis protein RfaG
98.51
d2bisa1 437
Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI
98.06
d1rzua_ 477
Glycogen synthase 1, GlgA {Agrobacterium tumefacie
97.74
d2bfwa1 196
Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI
97.7
d1v4va_ 373
UDP-N-acetylglucosamine 2-epimerase {Thermus therm
97.37
d1o6ca_ 377
UDP-N-acetylglucosamine 2-epimerase {Bacillus subt
96.88
d1f6da_ 376
UDP-N-acetylglucosamine 2-epimerase {Escherichia c
96.44
d1u0ta_
302
Inorganic polyphosphate/ATP-NAD kinase PpnK {Mycob
93.74
d1rcua_ 170
Hypothetical protein TM1055 {Thermotoga maritima [
93.52
d1pswa_ 348
ADP-heptose LPS heptosyltransferase II {Escherichi
93.38
d1uqta_ 456
Trehalose-6-phosphate synthase, OtsA {Escherichia
92.86
d1t35a_ 179
Hypothetical protein YvdD {Bacillus subtilis [TaxI
92.35
d2q4oa1 183
Hypothetical protein At2g37210/T2N18.3 {Thale cres
91.72
d1q6za2 180
Benzoylformate decarboxylase {Pseudomonas putida [
84.44
d1z0sa1
249
Inorganic polyphosphate/ATP-NAD kinase PpnK {Archa
83.72
d2ihta2 186
Carboxyethylarginine synthase {Streptomyces clavul
82.41
d1ydhb_ 181
Hypothetical protein At5g11950 {Thale cress (Arabi
80.4
>d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]}
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class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: UDP glucose:flavonoid 3-o-glucosyltransferase
species: Grape (Vitis vinifera) [TaxId: 29760]
Probab=99.96 E-value=4.9e-29 Score=178.92 Aligned_cols=123 Identities=26% Similarity=0.410 Sum_probs=111.7
Q ss_pred CHHHHHHHHHHHhhCCCeEEEEEcCCCCC--------CCCCcEEEeeccChHHhhcCCCcceEEecCChhhHHHHHHhCC
Q psy10186 2 SDGMRTLLVTAFSRTGLTVLWRYEGDSIE--------NLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGI 73 (124)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~i~~~g~~~~~--------~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~g~ 73 (124)
+.+.+.+++.++++.+++|+|..+..... ..+.|+.+..|+|+.++|.|+++++||||||.||+.||+++|+
T Consensus 279 ~~~~~~~~~~~~~~~~~~vl~~~~~~~~~~l~~~~~~~~~~nv~~~~~~pq~~lL~hp~~~~fItHGG~~s~~eal~~Gv 358 (450)
T d2c1xa1 279 PPAEVVALSEALEASRVPFIWSLRDKARVHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGV 358 (450)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEECCGGGGGGSCTTHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHhcCCeEEEEECCCccccCChhhhhhccccccccccCChHhhhccCceeEEEccCCccHHHHHHHcCC
Confidence 46778899999999999999998664321 2467999999999999999999999999999999999999999
Q ss_pred CeeeecccccHHHHHHHHHH-cCceeEecCCCCCHHHHHHHHHHHhcCCCCC
Q psy10186 74 PIIGVPFYGDQLSHVRHIVD-LGAGVELSYFNITLESIAWATSIVLNNPRRY 124 (124)
Q Consensus 74 P~l~~P~~~~q~~~a~~~~~-~g~g~~~~~~~~~~~~l~~~l~~ll~~~~~r 124 (124)
|+|++|.+.||+.||.++++ +|+|+.++.+.++.++|.++|+++|+|++||
T Consensus 359 P~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~t~~~l~~ai~~vL~d~~y~ 410 (450)
T d2c1xa1 359 PLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVFTKSGLMSCFDQILSQEKGK 410 (450)
T ss_dssp CEEECCCSTTHHHHHHHHHHTSCCEEECGGGSCCHHHHHHHHHHHHHSHHHH
T ss_pred CEEecccccchHHHHHHHHHHcCcEEEecCCCcCHHHHHHHHHHHhcCcHHH
Confidence 99999999999999999987 6999999989999999999999999998763
>d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: (Iso)flavonoid glycosyltransferase
species: Medicago truncatula [TaxId: 3880]
Probab=99.95 E-value=1.4e-28 Score=176.52 Aligned_cols=120 Identities=27% Similarity=0.457 Sum_probs=107.6
Q ss_pred CHHHHHHHHHHHhhCCCeEEEEEcCCCCC------------CCCCcEEEeeccChHHhhcCCCcceEEecCChhhHHHHH
Q psy10186 2 SDGMRTLLVTAFSRTGLTVLWRYEGDSIE------------NLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAI 69 (124)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~i~~~g~~~~~------------~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~ 69 (124)
+.+...++++++++.+.+++|+++..... ..+.|+++.+|+||.++|.|++|++||||||.||+.||+
T Consensus 302 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Nv~~~~~~Pq~~lL~hp~~~~fItHGG~~s~~Eal 381 (473)
T d2pq6a1 302 TPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESI 381 (473)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECCGGGSTTTGGGSCHHHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHH
T ss_pred cHHHHHHHHHHHHhcCCeEEEEEccCCcccccccCcccchhhccCceEEeeeCCHHHHhcCCcCcEEEecCCccHHHHHH
Confidence 45677889999999999999998764311 135699999999999999999999999999999999999
Q ss_pred HhCCCeeeecccccHHHHHHHHHH-cCceeEecCCCCCHHHHHHHHHHHhcCCC
Q psy10186 70 HYGIPIIGVPFYGDQLSHVRHIVD-LGAGVELSYFNITLESIAWATSIVLNNPR 122 (124)
Q Consensus 70 ~~g~P~l~~P~~~~q~~~a~~~~~-~g~g~~~~~~~~~~~~l~~~l~~ll~~~~ 122 (124)
++|+|+|++|.+.||+.||+++++ +|+|+.++ .+++.++|.++|+++++|++
T Consensus 382 ~~GVP~lv~P~~~DQ~~na~rv~~~~G~G~~l~-~~~t~~~l~~ai~~vl~d~~ 434 (473)
T d2pq6a1 382 CAGVPMLCWPFFADQPTDCRFICNEWEIGMEID-TNVKREELAKLINEVIAGDK 434 (473)
T ss_dssp HHTCCEEECCCSTTHHHHHHHHHHTSCCEEECC-SSCCHHHHHHHHHHHHTSHH
T ss_pred HcCCCEEeccchhhhHHHHHHHHHHcCeEEeeC-CCcCHHHHHHHHHHHHcCCh
Confidence 999999999999999999999955 69999998 47899999999999999975
>d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: Hydroquinone glucosyltransferase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.95 E-value=2.3e-27 Score=170.26 Aligned_cols=120 Identities=25% Similarity=0.367 Sum_probs=105.3
Q ss_pred HHHHHHHHHHHhhCCCeEEEEEcCCCCC-------------------------CCCCcEEEeeccChHHhhcCCCcceEE
Q psy10186 3 DGMRTLLVTAFSRTGLTVLWRYEGDSIE-------------------------NLPGNVHIRKWIPQQDVLAHPNCRLFI 57 (124)
Q Consensus 3 ~~~~~~~~~~l~~~~~~~i~~~g~~~~~-------------------------~~~~~v~~~~~~~~~~~l~~~~~d~~i 57 (124)
...+.++...+...+.+++|..+..... ..++|+++.+|+||.++|.|+++++||
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~w~Pq~~lL~hp~~~~fV 357 (471)
T d2vcha1 278 CEQLNELALGLADSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFL 357 (471)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEE
T ss_pred HHHHHHHHHHHHhhcCCeEEEeccccccccccccccccccchhhhCCchhhhhccCCCeeecccCCHHHHhcCccCCEEE
Confidence 4556788888999999999998763210 135689999999999999999999999
Q ss_pred ecCChhhHHHHHHhCCCeeeecccccHHHHHHHHHH-cCceeEecCCC---CCHHHHHHHHHHHhcCCC
Q psy10186 58 SHGGVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVD-LGAGVELSYFN---ITLESIAWATSIVLNNPR 122 (124)
Q Consensus 58 ~~gG~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~-~g~g~~~~~~~---~~~~~l~~~l~~ll~~~~ 122 (124)
||||+||+.||+++|+|+|++|.++||+.||+++++ +|+|+.+...+ +++++|.++|+++++|++
T Consensus 358 tHGG~gS~~EAl~~GvP~v~~P~~~DQ~~nA~rv~e~lG~Gv~l~~~~~~~~t~~~l~~ai~~vl~~~~ 426 (471)
T d2vcha1 358 THCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVRREEVARVVKGLMEGEE 426 (471)
T ss_dssp ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCTTSCCCHHHHHHHHHHHHTSTH
T ss_pred ecCCccHHHHHHHcCCCEEEcccccccHHHHHHHHHHheeEEEEecCCCCcCCHHHHHHHHHHHhCCcH
Confidence 999999999999999999999999999999999955 69999987554 799999999999999875
>d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: Triterpene UDP-glucosyl transferase UGT71G1
species: Medicago truncatula [TaxId: 3880]
Probab=99.94 E-value=9e-27 Score=166.75 Aligned_cols=123 Identities=27% Similarity=0.456 Sum_probs=107.9
Q ss_pred CHHHHHHHHHHHhhCCCeEEEEEcCCCC---C------CCCCcEEEeeccChHHhhcCCCcceEEecCChhhHHHHHHhC
Q psy10186 2 SDGMRTLLVTAFSRTGLTVLWRYEGDSI---E------NLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYG 72 (124)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~i~~~g~~~~---~------~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~g 72 (124)
+.+.+..++.+++..+++++|..+.... . ..+.|+.+..|.|+.+++.|++||+||||||.||+.||+++|
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~v~~~~pq~~~l~~p~~~~fItHGG~gs~~eAl~~G 368 (461)
T d2acva1 289 GPSQIREIALGLKHSGVRFLWSNSAEKKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFG 368 (461)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECCCCGGGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHhcCccEEEEeecccccCCccchhhhccCCCeEEEecCCHHHHHhcccCCEEEecCCccHHHHHHHcC
Confidence 5678899999999999999999876431 1 146789999999999999999999999999999999999999
Q ss_pred CCeeeecccccHHHHHHHH-HHcCceeEecCCC------CCHHHHHHHHHHHhcC-CCCC
Q psy10186 73 IPIIGVPFYGDQLSHVRHI-VDLGAGVELSYFN------ITLESIAWATSIVLNN-PRRY 124 (124)
Q Consensus 73 ~P~l~~P~~~~q~~~a~~~-~~~g~g~~~~~~~------~~~~~l~~~l~~ll~~-~~~r 124 (124)
+|+|++|.+.||+.||+++ ++.|+|+.++.+. ++.++|+++|+++|++ +.||
T Consensus 369 VP~l~~P~~~DQ~~nA~rlve~~G~G~~l~~~~~~~~~~~t~~~l~~a~~~vl~~d~~~r 428 (461)
T d2acva1 369 VPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKDSIVH 428 (461)
T ss_dssp CCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTTCTHH
T ss_pred CCEEeCCcccchHHHHHHHHHHhCceEEeeccccccCCccCHHHHHHHHHHHhhCCHHHH
Confidence 9999999999999999997 5679999887543 7899999999999975 4464
>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: UDP-glucosyltransferase GtfB
species: Amycolatopsis orientalis [TaxId: 31958]
Probab=99.94 E-value=2.2e-26 Score=161.81 Aligned_cols=117 Identities=20% Similarity=0.204 Sum_probs=107.4
Q ss_pred CHHHHHHHHHHHhhCCCeEEEEEcCCC--CCCCCCcEEEeeccChHHhhcCCCcceEEecCChhhHHHHHHhCCCeeeec
Q psy10186 2 SDGMRTLLVTAFSRTGLTVLWRYEGDS--IENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVP 79 (124)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~i~~~g~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~g~P~l~~P 79 (124)
+.+.+.+++++++..+..++|..+... ....++|+++.+|+|+.+++ +.+|+||||||+||++||+++|+|+|++|
T Consensus 251 ~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~~l--~~~~~~V~hgG~~t~~Eal~~GvP~v~~P 328 (401)
T d1iira_ 251 PADAVRVAIDAIRAHGRRVILSRGWADLVLPDDGADCFAIGEVNHQVLF--GRVAAVIHHGGAGTTHVAARAGAPQILLP 328 (401)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECTTCTTCCCSSCGGGEEECSSCCHHHHG--GGSSEEEECCCHHHHHHHHHHTCCEEECC
T ss_pred chHHHHHHHHHHHHcCCeEEEeccCCccccccCCCCEEEEeccCHHHHH--hhcCEEEecCCchHHHHHHHhCCCEEEcc
Confidence 467788999999999999999887654 34468899999999999999 66999999999999999999999999999
Q ss_pred ccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcC
Q psy10186 80 FYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNN 120 (124)
Q Consensus 80 ~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~ 120 (124)
...||..||+++++.|+|+.+..++++.++|.++|++++++
T Consensus 329 ~~~DQ~~na~~l~~~G~g~~l~~~~~~~~~l~~ai~~~l~~ 369 (401)
T d1iira_ 329 QMADQPYYAGRVAELGVGVAHDGPIPTFDSLSAALATALTP 369 (401)
T ss_dssp CSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHHHHHTSH
T ss_pred ccccHHHHHHHHHHCCCEEEcCcCCCCHHHHHHHHHHHhCH
Confidence 99999999999999999999998899999999999999954
>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-vancosaminyltransferase GftD
species: Amycolatopsis orientalis [TaxId: 31958]
Probab=99.94 E-value=3.3e-26 Score=161.42 Aligned_cols=115 Identities=21% Similarity=0.219 Sum_probs=104.7
Q ss_pred HHHHHHHHHHhhCCCeEEEEEcCCC--CCCCCCcEEEeeccChHHhhcCCCcceEEecCChhhHHHHHHhCCCeeeeccc
Q psy10186 4 GMRTLLVTAFSRTGLTVLWRYEGDS--IENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFY 81 (124)
Q Consensus 4 ~~~~~~~~~l~~~~~~~i~~~g~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~g~P~l~~P~~ 81 (124)
+....+++++...+..++|..+.+. ....++|+++.+|+|+.+++ +.+|++|||||+||++||+++|+|+|++|..
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ll--~~~~~~I~hgG~~t~~Eal~~GvP~l~~P~~ 331 (401)
T d1rrva_ 254 DAAKVAVEAIRAQGRRVILSRGWTELVLPDDRDDCFAIDEVNFQALF--RRVAAVIHHGSAGTEHVATRAGVPQLVIPRN 331 (401)
T ss_dssp HHHHHHHHHHHHTTCCEEEECTTTTCCCSCCCTTEEEESSCCHHHHG--GGSSEEEECCCHHHHHHHHHHTCCEEECCCS
T ss_pred HHHHHHHHHHhhcCCeEEEeccccccccccCCCCEEEEeccCcHHHh--hhccEEEecCCchHHHHHHHhCCCEEEeccc
Confidence 5667788888999999888887654 34578999999999999999 6699999999999999999999999999999
Q ss_pred ccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcC
Q psy10186 82 GDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNN 120 (124)
Q Consensus 82 ~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~ 120 (124)
.||..||+++++.|+|+.+..++++.++|.++|++++++
T Consensus 332 ~DQ~~na~~v~~~G~g~~l~~~~~~~~~L~~ai~~vl~~ 370 (401)
T d1rrva_ 332 TDQPYFAGRVAALGIGVAHDGPTPTFESLSAALTTVLAP 370 (401)
T ss_dssp BTHHHHHHHHHHHTSEEECSSSCCCHHHHHHHHHHHTSH
T ss_pred ccHHHHHHHHHHCCCEEEcCcCCCCHHHHHHHHHHHhCH
Confidence 999999999999999999998889999999999999953
>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-epi-vancosaminyltransferase GtfA
species: Amycolatopsis orientalis [TaxId: 31958]
Probab=99.91 E-value=1.4e-24 Score=152.53 Aligned_cols=115 Identities=20% Similarity=0.237 Sum_probs=103.0
Q ss_pred HHHHHHHHHHhhCCCeEEEEEcCCC--CCCCCCcEEEeeccChHHhhcCCCcceEEecCChhhHHHHHHhCCCeeeeccc
Q psy10186 4 GMRTLLVTAFSRTGLTVLWRYEGDS--IENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFY 81 (124)
Q Consensus 4 ~~~~~~~~~l~~~~~~~i~~~g~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~g~P~l~~P~~ 81 (124)
+....+++++...+.+++|..+... ....++|+.+.+|+|+.+++ +.+|+||||||+||++||+++|+|+|++|..
T Consensus 238 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~p~~~ll--~~a~~~v~hgG~~t~~Eal~~G~P~v~~P~~ 315 (391)
T d1pn3a_ 238 DAAKMAIKAVRASGRRIVLSRGWADLVLPDDGADCFVVGEVNLQELF--GRVAAAIHHDSAGTTLLAMRAGIPQIVVRRV 315 (391)
T ss_dssp HHHHHHHHHHHHTTCCEEEECTTTTCCCSSCCTTCCEESSCCHHHHH--TTSSCEEEESCHHHHHHHHHHTCCEEEECSS
T ss_pred HHHHHHHHHHHhcCCEEEEeccccccccccCCCCEEEecccCHHHHH--hhccEEEecCchHHHHHHHHhCCcEEEeccc
Confidence 4566778888999999988877644 34468899999999999999 6799999999999999999999999999997
Q ss_pred cc----HHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcC
Q psy10186 82 GD----QLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNN 120 (124)
Q Consensus 82 ~~----q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~ 120 (124)
.| |..||+++++.|+|+.+..++++.++|.++|++++++
T Consensus 316 ~d~~~eQ~~nA~~l~~~G~g~~l~~~~~~~~~l~~~i~~~l~~ 358 (391)
T d1pn3a_ 316 VDNVVEQAYHADRVAELGVGVAVDGPVPTIDSLSAALDTALAP 358 (391)
T ss_dssp CCBTTBCCHHHHHHHHHTSEEEECCSSCCHHHHHHHHHHHTST
T ss_pred cCCcchHHHHHHHHHHCCCEEEcCcCCCCHHHHHHHHHHHhCH
Confidence 76 9999999999999999998889999999999999954
>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]
Probab=99.75 E-value=7.1e-19 Score=121.96 Aligned_cols=85 Identities=14% Similarity=0.165 Sum_probs=74.9
Q ss_pred CCCcEEEeeccChHHhhcCCCcceEEecCChhhHHHHHHhCCCeeeeccc---ccHHHHHHHHHHcCceeEecCCCCCHH
Q psy10186 32 LPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFY---GDQLSHVRHIVDLGAGVELSYFNITLE 108 (124)
Q Consensus 32 ~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~g~P~l~~P~~---~~q~~~a~~~~~~g~g~~~~~~~~~~~ 108 (124)
...++.+.+|.+++..++ ..||++|||||++|++|++++|+|+|++|.. +||..||+.+++.|+|+.++.++++.+
T Consensus 229 ~~~~~~v~~f~~~~~~lm-~~adl~It~~G~~T~~Eal~~g~P~I~iP~~~~~~~Q~~NA~~l~~~G~~~~~~~~~~~~e 307 (351)
T d1f0ka_ 229 GQPQHKVTEFIDDMAAAY-AWADVVVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVD 307 (351)
T ss_dssp TCTTSEEESCCSCHHHHH-HHCSEEEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTTSEEECCGGGCCHH
T ss_pred ccccceeeeehhhHHHHH-HhCchhhccccchHHHHHHHhCCceeeeecccCCchHHHHHHHHHHCCCEEEechhhCCHH
Confidence 567888899987655333 8999999999999999999999999999975 489999999999999999988888999
Q ss_pred HHHHHHHHH
Q psy10186 109 SIAWATSIV 117 (124)
Q Consensus 109 ~l~~~l~~l 117 (124)
.+.++|..+
T Consensus 308 ~l~~~l~~l 316 (351)
T d1f0ka_ 308 AVANTLAGW 316 (351)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHhh
Confidence 999988764
>d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: First mannosyl transferase WbaZ
species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.72 E-value=8.4e-08 Score=59.70 Aligned_cols=112 Identities=16% Similarity=0.189 Sum_probs=78.3
Q ss_pred HHHHHHHHHHhhCC-CeEEEEEcCCCCC-----------CCCCcEEEeeccChHHhhcC-CCcceEEecC----ChhhHH
Q psy10186 4 GMRTLLVTAFSRTG-LTVLWRYEGDSIE-----------NLPGNVHIRKWIPQQDVLAH-PNCRLFISHG----GVNSAL 66 (124)
Q Consensus 4 ~~~~~~~~~l~~~~-~~~i~~~g~~~~~-----------~~~~~v~~~~~~~~~~~l~~-~~~d~~i~~g----G~~t~~ 66 (124)
+-+..+++++..++ .+++++....... ...+|+++.++++..++... ..+|++|+.. ...+++
T Consensus 25 K~~~~~i~a~~~l~~~~l~ivg~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~i~ps~~e~~~~~~~ 104 (166)
T d2f9fa1 25 KRIELQLEVFKKLQDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCKGLLCTAKDEDFGLTPI 104 (166)
T ss_dssp GTHHHHHHHHHHCTTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHCSEEEECCSSCCSCHHHH
T ss_pred cCHHHHHHHHHHhcCCeEEEEEecccccchhhhhhhhcccccCcEEEeeccccccccccccccccccccccccccccccc
Confidence 34556677777665 5655543222111 13579999999998664322 7899988876 245899
Q ss_pred HHHHhCCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCC
Q psy10186 67 EAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPR 122 (124)
Q Consensus 67 ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~ 122 (124)
||+++|+|+|+. +-....+.+.+...|..... +.+++.+++.++++++.
T Consensus 105 Ea~~~g~pvi~s----~~~~~~e~i~~~~~g~~~~~---d~~~~~~~i~~l~~~~~ 153 (166)
T d2f9fa1 105 EAMASGKPVIAV----NEGGFKETVINEKTGYLVNA---DVNEIIDAMKKVSKNPD 153 (166)
T ss_dssp HHHHTTCCEEEE----SSHHHHHHCCBTTTEEEECS---CHHHHHHHHHHHHHCTT
T ss_pred ccccccccceee----cCCcceeeecCCcccccCCC---CHHHHHHHHHHHHhCHH
Confidence 999999999996 44445556666677876642 68999999999998865
>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Lipopolysaccharide core biosynthesis protein RfaG
species: Escherichia coli [TaxId: 562]
Probab=98.51 E-value=5.4e-08 Score=66.07 Aligned_cols=112 Identities=17% Similarity=0.178 Sum_probs=75.8
Q ss_pred HHHHHHHHHhhCC-----CeEEEEEcCCCCC---------CCCCcEEEeeccCh-HHhhcCCCcceEEecC----ChhhH
Q psy10186 5 MRTLLVTAFSRTG-----LTVLWRYEGDSIE---------NLPGNVHIRKWIPQ-QDVLAHPNCRLFISHG----GVNSA 65 (124)
Q Consensus 5 ~~~~~~~~l~~~~-----~~~i~~~g~~~~~---------~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~g----G~~t~ 65 (124)
-+..+++++..+. ..++++.|.+... ....++++.++.+. .+++ ..+|++|..+ -..++
T Consensus 209 g~~~li~a~~~l~~~~~~~~~~ii~g~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~--~~adv~v~ps~~E~~~~~~ 286 (370)
T d2iw1a1 209 GVDRSIEALASLPESLRHNTLLFVVGQDKPRKFEALAEKLGVRSNVHFFSGRNDVSELM--AAADLLLHPAYQEAAGIVL 286 (370)
T ss_dssp THHHHHHHHHTSCHHHHHTEEEEEESSSCCHHHHHHHHHHTCGGGEEEESCCSCHHHHH--HHCSEEEECCSCCSSCHHH
T ss_pred chhhhcccccccccccccceeeecccccccccccccccccccccccccccccccccccc--cccccccccccccccccee
Confidence 3556666665442 3455555544311 24567888777654 4455 7899998764 34789
Q ss_pred HHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCCC
Q psy10186 66 LEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPRR 123 (124)
Q Consensus 66 ~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~~ 123 (124)
+||+++|+|+|+-. .....+.+.+.+.|..+.+ ..+.+++.++|.++++|+..
T Consensus 287 ~EAma~G~PvI~s~----~~g~~e~i~~~~~G~l~~~-~~d~~~la~~i~~ll~d~~~ 339 (370)
T d2iw1a1 287 LEAITAGLPVLTTA----VCGYAHYIADANCGTVIAE-PFSQEQLNEVLRKALTQSPL 339 (370)
T ss_dssp HHHHHHTCCEEEET----TSTTTHHHHHHTCEEEECS-SCCHHHHHHHHHHHHHCHHH
T ss_pred eecccCCeeEEEeC----CCChHHHhcCCCceEEEcC-CCCHHHHHHHHHHHHcCHHH
Confidence 99999999999963 3334566777788876642 23789999999999988753
>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]
Probab=98.06 E-value=4.9e-06 Score=57.77 Aligned_cols=84 Identities=17% Similarity=-0.004 Sum_probs=58.1
Q ss_pred CCCcEEEeeccChHHhhcC-CCcceEEecC----ChhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecCCCCC
Q psy10186 32 LPGNVHIRKWIPQQDVLAH-PNCRLFISHG----GVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNIT 106 (124)
Q Consensus 32 ~~~~v~~~~~~~~~~~l~~-~~~d~~i~~g----G~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~ 106 (124)
.+.++.+.++.+..++... ..+|+++..+ ...+++||+++|+|+|..... ...+.+. .+.|..+.+ .+
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~adi~v~~s~~e~~~~~~~Eama~G~Pvi~~~~g----~~~e~i~-~~~G~~~~~--~d 379 (437)
T d2bisa1 307 HGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVG----GLRDIIT-NETGILVKA--GD 379 (437)
T ss_dssp CTTEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHTTTCEEEEESCT----THHHHCC-TTTCEEECT--TC
T ss_pred cccceeccccCcHHHHHHHHhhhccccccccccccchHHHHHHHCCCCEEEeCCC----CcHHhEE-CCcEEEECC--CC
Confidence 3455667777776543222 7899988764 356999999999999985332 3334344 367887753 36
Q ss_pred HHHHHHHHHHHhc-CCC
Q psy10186 107 LESIAWATSIVLN-NPR 122 (124)
Q Consensus 107 ~~~l~~~l~~ll~-~~~ 122 (124)
.++++++|.++++ +++
T Consensus 380 ~~~la~~i~~ll~~~~~ 396 (437)
T d2bisa1 380 PGELANAILKALELSRS 396 (437)
T ss_dssp HHHHHHHHHHHHTTTTS
T ss_pred HHHHHHHHHHHHhCCHH
Confidence 8999999999886 544
>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Agrobacterium tumefaciens [TaxId: 358]
Probab=97.74 E-value=3.7e-05 Score=54.56 Aligned_cols=101 Identities=18% Similarity=0.180 Sum_probs=69.0
Q ss_pred HhhCCCeEEEEEcCCCC---------CCCCCcEEEeeccChHHhh-cCCCcceEEecCC----hhhHHHHHHhCCCeeee
Q psy10186 13 FSRTGLTVLWRYEGDSI---------ENLPGNVHIRKWIPQQDVL-AHPNCRLFISHGG----VNSALEAIHYGIPIIGV 78 (124)
Q Consensus 13 l~~~~~~~i~~~g~~~~---------~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~~gG----~~t~~ea~~~g~P~l~~ 78 (124)
+.+.+.++++...++.. ...+.++.+..+.+..... .+..+|+++..+- ..+++||+++|+|+|+-
T Consensus 316 ~~~~~~~l~~~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD~~v~PS~~E~fglv~lEAma~G~PvVas 395 (477)
T d1rzua_ 316 IVSLGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVVA 395 (477)
T ss_dssp HHHTTCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTCEEEEE
T ss_pred HHhhCCeEEEEecCCchHHHHHHHHHhhcCCeEEEEcccChhHHHHHHHhCccccCCccccCCCHHHHHHHHcCCCEEEc
Confidence 34457787766544321 1256788888877654421 1178999999883 25888999999999994
Q ss_pred cccccHHHHHHHHHH---------cCceeEecCCCCCHHHHHHHHHHHhc
Q psy10186 79 PFYGDQLSHVRHIVD---------LGAGVELSYFNITLESIAWATSIVLN 119 (124)
Q Consensus 79 P~~~~q~~~a~~~~~---------~g~g~~~~~~~~~~~~l~~~l~~ll~ 119 (124)
+.....+.+.+ .+.|..+.+ .+.+++.++|+++++
T Consensus 396 ----~~GG~~E~v~d~~~~~~~~~~~~G~l~~~--~d~~~la~ai~~~l~ 439 (477)
T d1rzua_ 396 ----RTGGLADTVIDANHAALASKAATGVQFSP--VTLDGLKQAIRRTVR 439 (477)
T ss_dssp ----SSHHHHHHCCBCCHHHHHTTCCCBEEESS--CSHHHHHHHHHHHHH
T ss_pred ----CCCCCcceeecCCccccccCCCceEEeCC--CCHHHHHHHHHHHHh
Confidence 66666665543 347777753 468999999988764
>d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]
Probab=97.70 E-value=3.2e-05 Score=48.72 Aligned_cols=80 Identities=18% Similarity=-0.008 Sum_probs=54.9
Q ss_pred CCcEEEeeccChHHhhcC-CCcceEEe----cCChhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecCCCCCH
Q psy10186 33 PGNVHIRKWIPQQDVLAH-PNCRLFIS----HGGVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITL 107 (124)
Q Consensus 33 ~~~v~~~~~~~~~~~l~~-~~~d~~i~----~gG~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~ 107 (124)
...+.+.++++..++-.. ..+|++|. .|-.++++||+++|+|+|+- +-....+.+ ..+.|..+.+ .+.
T Consensus 91 ~~~~~~~~~~~~~~l~~~~~~~di~v~ps~~e~~~~~~~Eam~~G~pvI~~----~~~~~~e~i-~~~~g~~~~~--~~~ 163 (196)
T d2bfwa1 91 GNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIAS----AVGGLRDII-TNETGILVKA--GDP 163 (196)
T ss_dssp TTEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEEEEE----SCHHHHHHC-CTTTCEEECT--TCH
T ss_pred ceeEEeeeccccccchhccccccccccccccccccccchhhhhcCceeeec----CCCccceee-cCCceeeECC--CCH
Confidence 444556778876542221 88999985 33457999999999999995 333344433 3467877753 368
Q ss_pred HHHHHHHHHHhc
Q psy10186 108 ESIAWATSIVLN 119 (124)
Q Consensus 108 ~~l~~~l~~ll~ 119 (124)
+++.++|.+++.
T Consensus 164 ~~l~~~i~~~l~ 175 (196)
T d2bfwa1 164 GELANAILKALE 175 (196)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 899999988775
>d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDP-N-acetylglucosamine 2-epimerase
domain: UDP-N-acetylglucosamine 2-epimerase
species: Thermus thermophilus [TaxId: 274]
Probab=97.37 E-value=0.00025 Score=49.15 Aligned_cols=109 Identities=13% Similarity=0.115 Sum_probs=72.3
Q ss_pred HHHHHHHHhhC--CCeEEEEEcCCC--------CCCCCCcEEEeeccChHHhhcC-CCcceEEecCChhhHHHHHHhCCC
Q psy10186 6 RTLLVTAFSRT--GLTVLWRYEGDS--------IENLPGNVHIRKWIPQQDVLAH-PNCRLFISHGGVNSALEAIHYGIP 74 (124)
Q Consensus 6 ~~~~~~~l~~~--~~~~i~~~g~~~--------~~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~~gG~~t~~ea~~~g~P 74 (124)
+..+++.+... ...+++....+. .....+|+.+++.+++.+.+.. ..|+++|+.+|.+ ..||.++|+|
T Consensus 214 ~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~l~ll~~s~~vignSssg-i~Ea~~lg~P 292 (373)
T d1v4va_ 214 LAQALKRVAEAFPHLTFVYPVHLNPVVREAVFPVLKGVRNFVLLDPLEYGSMAALMRASLLLVTDSGGL-QEEGAALGVP 292 (373)
T ss_dssp HHHHHHHHHHHCTTSEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTEEEEEESCHHH-HHHHHHTTCC
T ss_pred HHHHHHHHhhhcccceeeeeecccccchhhhhhhhcccccceeeccchHHHHHHHhhhceeEecccchh-hhcchhhcCc
Confidence 34445555443 346666554432 1135578999998887775422 7899999999885 8899999999
Q ss_pred eeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCC
Q psy10186 75 IIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPR 122 (124)
Q Consensus 75 ~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~ 122 (124)
+|.+...++...- + +.|.-+.+. .+.+++.+++++++.++.
T Consensus 293 ~Inir~~~eRqeg---~-~~g~nvlv~---~d~~~I~~~i~~~l~~~~ 333 (373)
T d1v4va_ 293 VVVLRNVTERPEG---L-KAGILKLAG---TDPEGVYRVVKGLLENPE 333 (373)
T ss_dssp EEECSSSCSCHHH---H-HHTSEEECC---SCHHHHHHHHHHHHTCHH
T ss_pred EEEeCCCccCHHH---H-hcCeeEEcC---CCHHHHHHHHHHHHcCHH
Confidence 9998654443332 1 245555443 378899999988886643
>d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDP-N-acetylglucosamine 2-epimerase
domain: UDP-N-acetylglucosamine 2-epimerase
species: Bacillus subtilis [TaxId: 1423]
Probab=96.88 E-value=0.0026 Score=43.85 Aligned_cols=108 Identities=14% Similarity=0.103 Sum_probs=65.9
Q ss_pred HHHHHHHHHhhCC-CeEEEEEcCCC--------CCCCCCcEEEeeccChHHhhcC-CCcceEEecCChhhHHHHHHhCCC
Q psy10186 5 MRTLLVTAFSRTG-LTVLWRYEGDS--------IENLPGNVHIRKWIPQQDVLAH-PNCRLFISHGGVNSALEAIHYGIP 74 (124)
Q Consensus 5 ~~~~~~~~l~~~~-~~~i~~~g~~~--------~~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~~gG~~t~~ea~~~g~P 74 (124)
.+..+...+.... ..+++...... .....+|+.+.+.+++.+.+.. ..|+++|+.+|.+ ..||.+.|+|
T Consensus 218 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ni~~~~~l~~~~fl~llk~s~~vIgnSss~-i~Ea~~lg~P 296 (377)
T d1o6ca_ 218 MFKAIRRIVGEFEDVQVVYPVHLNPVVREAAHKHFGDSDRVHLIEPLEVIDFHNFAAKSHFILTDSGGV-QEEAPSLGKP 296 (377)
T ss_dssp HHHHHHHHHHHCTTEEEEEC----CHHHHHHHHC--CCSSEEECCCCCHHHHHHHHHHCSEEEEC--CH-HHHGGGGTCC
T ss_pred HHHHHHhhcccccccccccccccccccchhhhhccccccceEeccccchHHHHHHHhhhheeecccchh-HHhhhhhhce
Confidence 3445555555554 45555444322 1235678999999987774322 7899999999997 7899999999
Q ss_pred eeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcC
Q psy10186 75 IIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNN 120 (124)
Q Consensus 75 ~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~ 120 (124)
+|.+-...|+..- .+.|.-+.+. .+.+++.+++.+++.+
T Consensus 297 ~Inir~~tERqe~----~~~g~nilv~---~~~~~I~~~i~~~l~~ 335 (377)
T d1o6ca_ 297 VLVLRDTTERPEG----VEAGTLKLAG---TDEENIYQLAKQLLTD 335 (377)
T ss_dssp EEEECSCCC---C----TTTTSSEEEC---SCHHHHHHHHHHHHHC
T ss_pred EEEeCCCCcCcch----hhcCeeEECC---CCHHHHHHHHHHHHhC
Confidence 9998554444321 1244444443 3678888888877654
>d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDP-N-acetylglucosamine 2-epimerase
domain: UDP-N-acetylglucosamine 2-epimerase
species: Escherichia coli [TaxId: 562]
Probab=96.44 E-value=0.0038 Score=43.08 Aligned_cols=82 Identities=13% Similarity=0.061 Sum_probs=58.8
Q ss_pred CCCcEEEeeccChHHhhcC-CCcceEEecCChhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHH
Q psy10186 32 LPGNVHIRKWIPQQDVLAH-PNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESI 110 (124)
Q Consensus 32 ~~~~v~~~~~~~~~~~l~~-~~~d~~i~~gG~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l 110 (124)
..+|+.+++.+++.+.+.. ..|+++|+.+|.+ ..||.+.|+|+|.+-...+|... + +.|.-+.+. .+.+++
T Consensus 261 ~~~ni~~~~~l~~~~fl~ll~~a~~vignSssg-i~Ea~~lg~P~Inir~~ter~~~---~-~~g~~i~v~---~~~~~I 332 (376)
T d1f6da_ 261 HVKNVILIDPQEYLPFVWLMNHAWLILTDSGGI-QEEAPSLGKPVLVMRDTTERPEA---V-TAGTVRLVG---TDKQRI 332 (376)
T ss_dssp TCTTEEEECCCCHHHHHHHHHHCSEEEESSSGG-GGTGGGGTCCEEECSSCCSCHHH---H-HHTSEEECC---SSHHHH
T ss_pred ccccceeeccccHHHHHHHHhhceEEEecCcch-HhhHHHhCCCEEEcCCCccCccc---e-ecCeeEECC---CCHHHH
Confidence 4678999888887664322 7899999999985 88999999999988544455542 2 234444443 378888
Q ss_pred HHHHHHHhcCC
Q psy10186 111 AWATSIVLNNP 121 (124)
Q Consensus 111 ~~~l~~ll~~~ 121 (124)
.+++.+++.++
T Consensus 333 ~~ai~~~l~~~ 343 (376)
T d1f6da_ 333 VEEVTRLLKDE 343 (376)
T ss_dssp HHHHHHHHHCH
T ss_pred HHHHHHHHhCh
Confidence 88888877543
>d1u0ta_ e.52.1.1 (A:) Inorganic polyphosphate/ATP-NAD kinase PpnK {Mycobacterium tuberculosis [TaxId: 1773]}
Back Show information, alignment and structure
class: Multi-domain proteins (alpha and beta)
fold: NAD kinase/diacylglycerol kinase-like
superfamily: NAD kinase/diacylglycerol kinase-like
family: NAD kinase-like
domain: Inorganic polyphosphate/ATP-NAD kinase PpnK
species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=93.74 E-value=0.082 Score=35.22 Aligned_cols=75 Identities=16% Similarity=0.244 Sum_probs=40.6
Q ss_pred HHHHHHHHHHhhCCCeEEEEEcCCC----CCCCCCcEEEeec-----cChHHhhcCCCcceEEecCChhhHHHHHH----
Q psy10186 4 GMRTLLVTAFSRTGLTVLWRYEGDS----IENLPGNVHIRKW-----IPQQDVLAHPNCRLFISHGGVNSALEAIH---- 70 (124)
Q Consensus 4 ~~~~~~~~~l~~~~~~~i~~~g~~~----~~~~~~~v~~~~~-----~~~~~~l~~~~~d~~i~~gG~~t~~ea~~---- 70 (124)
+...++.+.|.+.+..+.+...... ....+......+. -...+.. ..+|++|+=||-||++.+++
T Consensus 16 ~~a~~i~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~Dlvi~lGGDGT~L~a~~~~~~ 93 (302)
T d1u0ta_ 16 ETARRVEKVLGDNKIALRVLSAEAVDRGSLHLAPDDMRAMGVEIEVVDADQHAA--DGCELVLVLGGDGTFLRAAELARN 93 (302)
T ss_dssp HHHHHHHHHHHTTTCEEEEEC-------------------------------------CCCEEEEECHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEecchhcccccccCchhhhhcCccccccccccccc--ccccEEEEEcCChHHHHHHHHhhc
Confidence 4567888888999988877543321 1111222211111 1122223 67999999999999998874
Q ss_pred hCCCeeeecc
Q psy10186 71 YGIPIIGVPF 80 (124)
Q Consensus 71 ~g~P~l~~P~ 80 (124)
.++|++.+-.
T Consensus 94 ~~~PilGin~ 103 (302)
T d1u0ta_ 94 ASIPVLGVNL 103 (302)
T ss_dssp HTCCEEEEEC
T ss_pred cCCeEEEeCC
Confidence 3899999844
>d1rcua_ c.129.1.1 (A:) Hypothetical protein TM1055 {Thermotoga maritima [TaxId: 2336]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: MCP/YpsA-like
superfamily: MCP/YpsA-like
family: MoCo carrier protein-like
domain: Hypothetical protein TM1055
species: Thermotoga maritima [TaxId: 2336]
Probab=93.52 E-value=0.4 Score=28.91 Aligned_cols=29 Identities=28% Similarity=0.417 Sum_probs=22.5
Q ss_pred CCcceE-EecCChhhHHH---HHHhCCCeeeec
Q psy10186 51 PNCRLF-ISHGGVNSALE---AIHYGIPIIGVP 79 (124)
Q Consensus 51 ~~~d~~-i~~gG~~t~~e---a~~~g~P~l~~P 79 (124)
..+|++ +..||.||+.| ++..++|++++.
T Consensus 95 ~~sda~I~lPGG~GTl~El~~a~~l~KPiilln 127 (170)
T d1rcua_ 95 RNADVVVSIGGEIGTAIEILGAYALGKPVILLR 127 (170)
T ss_dssp TTCSEEEEESCCHHHHHHHHHHHHTTCCEEEET
T ss_pred hcccceeeeccccchHHHHHHHHHhCCceEEec
Confidence 678885 55666898875 678899999873
>d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: ADP-heptose LPS heptosyltransferase II
domain: ADP-heptose LPS heptosyltransferase II
species: Escherichia coli [TaxId: 562]
Probab=93.38 E-value=0.033 Score=36.96 Aligned_cols=74 Identities=9% Similarity=0.120 Sum_probs=50.8
Q ss_pred CHHHHHHHHHHHhhCCCeEEEEEcCCCC-------CCC----CCcE-EEeeccChHH---hhcCCCcceEEecCChhhHH
Q psy10186 2 SDGMRTLLVTAFSRTGLTVLWRYEGDSI-------ENL----PGNV-HIRKWIPQQD---VLAHPNCRLFISHGGVNSAL 66 (124)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~i~~~g~~~~-------~~~----~~~v-~~~~~~~~~~---~l~~~~~d~~i~~gG~~t~~ 66 (124)
|.+.+.++++.+.+.+.++++..++++. ... ..++ .+.+-.+..+ ++ ..+|++|+.-+. .+.
T Consensus 198 p~~~~~~L~~~l~~~~~~ivl~g~~~e~~~~~~~~~~~~~~~~~~~~~l~g~~sl~el~~li--~~a~l~I~~Dtg-~~H 274 (348)
T d1pswa_ 198 PHYHYAELAKQLIDEGYQVVLFGSAKDHEAGNEILAALNTEQQAWCRNLAGETQLDQAVILI--AACKAIVTNDSG-LMH 274 (348)
T ss_dssp CHHHHHHHHHHHHHTTCEEEECCCGGGHHHHHHHHTTSCHHHHTTEEECTTTSCHHHHHHHH--HTSSEEEEESSH-HHH
T ss_pred chHHHhhhHHHHhhcCCccccccccchHHHHHHHHHhhhcccccccccccCCccHHHHHHHH--hcceeEeecCcc-HHH
Confidence 6678899999998888887776555431 011 1122 2233334333 44 789999999877 588
Q ss_pred HHHHhCCCeeee
Q psy10186 67 EAIHYGIPIIGV 78 (124)
Q Consensus 67 ea~~~g~P~l~~ 78 (124)
=|.+.|+|++.+
T Consensus 275 lAaa~g~p~i~l 286 (348)
T d1pswa_ 275 VAAALNRPLVAL 286 (348)
T ss_dssp HHHHTTCCEEEE
T ss_pred HHHHcCCCEEEE
Confidence 999999999998
>d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]}
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class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Trehalose-6-phosphate synthase, OtsA
domain: Trehalose-6-phosphate synthase, OtsA
species: Escherichia coli [TaxId: 562]
Probab=92.86 E-value=0.038 Score=38.80 Aligned_cols=80 Identities=10% Similarity=0.037 Sum_probs=53.5
Q ss_pred CcEEEeeccChHHhhcC-CCcceEEecC---C-hhhHHHHHHhCCCe----eeecccccHHHHHHHHHHcCceeEecCCC
Q psy10186 34 GNVHIRKWIPQQDVLAH-PNCRLFISHG---G-VNSALEAIHYGIPI----IGVPFYGDQLSHVRHIVDLGAGVELSYFN 104 (124)
Q Consensus 34 ~~v~~~~~~~~~~~l~~-~~~d~~i~~g---G-~~t~~ea~~~g~P~----l~~P~~~~q~~~a~~~~~~g~g~~~~~~~ 104 (124)
+.+.+...+++.++... ..+|+++..+ | ..+..|++++|+|. +++..+ -..++ ..+-|+.+++
T Consensus 331 ~~v~~~~~~~~~~l~a~~~~Adv~v~~s~~EG~~lv~~Ea~a~~~p~~~g~lIlS~~---~G~~~---~l~~g~lVnP-- 402 (456)
T d1uqta_ 331 PLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQF---AGAAN---ELTSALIVNP-- 402 (456)
T ss_dssp SEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETT---BGGGG---TCTTSEEECT--
T ss_pred ceeeccCCcCHHHHhHHHhhhceeecCCccCCCCcHHHHHHHhCCCCCCCcEEEeCC---CCCHH---HhCCeEEECc--
Confidence 44667777777665544 7899988765 4 35788999999993 333222 11122 2234777764
Q ss_pred CCHHHHHHHHHHHhcCC
Q psy10186 105 ITLESIAWATSIVLNNP 121 (124)
Q Consensus 105 ~~~~~l~~~l~~ll~~~ 121 (124)
.+.++++++|.++++.+
T Consensus 403 ~d~~~~A~ai~~aL~~~ 419 (456)
T d1uqta_ 403 YDRDEVAAALDRALTMS 419 (456)
T ss_dssp TCHHHHHHHHHHHHTCC
T ss_pred CCHHHHHHHHHHHHcCC
Confidence 47999999999998754
>d1t35a_ c.129.1.1 (A:) Hypothetical protein YvdD {Bacillus subtilis [TaxId: 1423]}
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class: Alpha and beta proteins (a/b)
fold: MCP/YpsA-like
superfamily: MCP/YpsA-like
family: MoCo carrier protein-like
domain: Hypothetical protein YvdD
species: Bacillus subtilis [TaxId: 1423]
Probab=92.35 E-value=0.65 Score=28.17 Aligned_cols=46 Identities=17% Similarity=0.128 Sum_probs=28.2
Q ss_pred CCcceE-EecCChhhHHHHHHh---------CCCeeeecc---cccHHHHHHHHHHcCc
Q psy10186 51 PNCRLF-ISHGGVNSALEAIHY---------GIPIIGVPF---YGDQLSHVRHIVDLGA 96 (124)
Q Consensus 51 ~~~d~~-i~~gG~~t~~ea~~~---------g~P~l~~P~---~~~q~~~a~~~~~~g~ 96 (124)
..+|+| +-.||.||+-|.+.. .+|++++-. |..-....+.+.+.|.
T Consensus 96 ~~sdafI~lPGG~GTLdEl~e~l~~~ql~~~~kPiil~n~~gfw~~l~~~l~~~~~~gf 154 (179)
T d1t35a_ 96 ELADGFISMPGGFGTYEELFEVLCWAQIGIHQKPIGLYNVNGYFEPMMKMVKYSIQEGF 154 (179)
T ss_dssp HHCSEEEECSCCHHHHHHHHHHHHTTSCSSCCCCEEEECGGGTTHHHHHHHHHHHHTTS
T ss_pred HhcCeEEEecCccchhhHHHHHHHHHHhhccCCCeEeecCCccHHHHHHHHHHHHHcCC
Confidence 567875 667788999887544 479998732 2222333345555553
>d2q4oa1 c.129.1.1 (A:8-190) Hypothetical protein At2g37210/T2N18.3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: MCP/YpsA-like
superfamily: MCP/YpsA-like
family: MoCo carrier protein-like
domain: Hypothetical protein At2g37210/T2N18.3
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=91.72 E-value=0.8 Score=27.88 Aligned_cols=28 Identities=18% Similarity=0.207 Sum_probs=20.6
Q ss_pred CCcceE-EecCChhhHHHHHH---------hCCCeeee
Q psy10186 51 PNCRLF-ISHGGVNSALEAIH---------YGIPIIGV 78 (124)
Q Consensus 51 ~~~d~~-i~~gG~~t~~ea~~---------~g~P~l~~ 78 (124)
..+|+| +-.||.||+-|... +.+|++++
T Consensus 101 ~~sdafIvlPGG~GTLdEl~e~lt~~ql~~~~kpiiil 138 (183)
T d2q4oa1 101 KHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLL 138 (183)
T ss_dssp HTCSEEEECSCCHHHHHHHHHHHHHHHHTSCCCCEEEE
T ss_pred HhCceEEEeCCcchhHHHHHHHHHHHHhcCCCCCeEEe
Confidence 678885 56778899987743 46888876
>d1q6za2 c.36.1.5 (A:2-181) Benzoylformate decarboxylase {Pseudomonas putida [TaxId: 303]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Thiamin diphosphate-binding fold (THDP-binding)
superfamily: Thiamin diphosphate-binding fold (THDP-binding)
family: Pyruvate oxidase and decarboxylase Pyr module
domain: Benzoylformate decarboxylase
species: Pseudomonas putida [TaxId: 303]
Probab=84.44 E-value=2.3 Score=25.53 Aligned_cols=75 Identities=11% Similarity=0.154 Sum_probs=49.7
Q ss_pred HHHHHHHHHhhCCCeEEEEEcCCC----CCCCCCcEEEeeccChHH---------hhcCCCcceEEecCCh------hhH
Q psy10186 5 MRTLLVTAFSRTGLTVLWRYEGDS----IENLPGNVHIRKWIPQQD---------VLAHPNCRLFISHGGV------NSA 65 (124)
Q Consensus 5 ~~~~~~~~l~~~~~~~i~~~g~~~----~~~~~~~v~~~~~~~~~~---------~l~~~~~d~~i~~gG~------~t~ 65 (124)
.-+.+++.|.+.|++.++.+.++. .....+++.++....... .+. .+..++++|+|. +.+
T Consensus 3 v~~~i~e~L~~~GV~~vFgipG~~~~~~~~al~~~i~~i~~rhE~~A~~mA~gyar~t-gk~~v~~~~~GpG~~n~~~gl 81 (180)
T d1q6za2 3 VHGTTYELLRRQGIDTVFGNPGSNALPFLKDFPEDFRYILALQEACVVGIADGYAQAS-RKPAFINLHSAAGTGNAMGAL 81 (180)
T ss_dssp HHHHHHHHHHHTTCCEEEECCCGGGHHHHTTCCTTCEEEECSSHHHHHHHHHHHHHHH-TSCEEEEEEHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHCCCCEEEEECcHhHHHHHHHHHhCCeEEEEccchhHHHHHHHHhhhc-cCcceEEecccccccccccee
Confidence 346789999999998888765533 233445666555332111 111 567778888764 457
Q ss_pred HHHHHhCCCeeeecc
Q psy10186 66 LEAIHYGIPIIGVPF 80 (124)
Q Consensus 66 ~ea~~~g~P~l~~P~ 80 (124)
.+|...+.|+|++.-
T Consensus 82 ~~A~~~~~Pvlvi~g 96 (180)
T d1q6za2 82 SNAWNSHSPLIVTAG 96 (180)
T ss_dssp HHHHHTTCCEEEEEE
T ss_pred Hhhhhcccceeeecc
Confidence 899999999999854
>d1z0sa1 e.52.1.1 (A:1-249) Inorganic polyphosphate/ATP-NAD kinase PpnK {Archaeoglobus fulgidus [TaxId: 2234]}
Back Show information, alignment and structure
class: Multi-domain proteins (alpha and beta)
fold: NAD kinase/diacylglycerol kinase-like
superfamily: NAD kinase/diacylglycerol kinase-like
family: NAD kinase-like
domain: Inorganic polyphosphate/ATP-NAD kinase PpnK
species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=83.72 E-value=1.2 Score=28.47 Aligned_cols=30 Identities=27% Similarity=0.445 Sum_probs=24.8
Q ss_pred CCcceEEecCChhhHHHHHHh---CCCeeeecc
Q psy10186 51 PNCRLFISHGGVNSALEAIHY---GIPIIGVPF 80 (124)
Q Consensus 51 ~~~d~~i~~gG~~t~~ea~~~---g~P~l~~P~ 80 (124)
..+|++|+-||-||++.++.. .+|++.+..
T Consensus 38 ~~~D~vi~iGGDGT~L~a~~~~~~~~PilGIn~ 70 (249)
T d1z0sa1 38 ENFDFIVSVGGDGTILRILQKLKRCPPIFGINT 70 (249)
T ss_dssp GGSSEEEEEECHHHHHHHHTTCSSCCCEEEEEC
T ss_pred cCCCEEEEECCcHHHHHHHHHhcCCCcEEEECc
Confidence 568999999999999999864 468888744
>d2ihta2 c.36.1.5 (A:12-197) Carboxyethylarginine synthase {Streptomyces clavuligerus [TaxId: 1901]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Thiamin diphosphate-binding fold (THDP-binding)
superfamily: Thiamin diphosphate-binding fold (THDP-binding)
family: Pyruvate oxidase and decarboxylase Pyr module
domain: Carboxyethylarginine synthase
species: Streptomyces clavuligerus [TaxId: 1901]
Probab=82.41 E-value=3.5 Score=24.78 Aligned_cols=73 Identities=10% Similarity=0.072 Sum_probs=48.5
Q ss_pred HHHHHHHHhhCCCeEEEEEcCCC----CCCCCCcEEEeeccChH-Hhhc-------CCCcceEEecCCh------hhHHH
Q psy10186 6 RTLLVTAFSRTGLTVLWRYEGDS----IENLPGNVHIRKWIPQQ-DVLA-------HPNCRLFISHGGV------NSALE 67 (124)
Q Consensus 6 ~~~~~~~l~~~~~~~i~~~g~~~----~~~~~~~v~~~~~~~~~-~~l~-------~~~~d~~i~~gG~------~t~~e 67 (124)
-+.+++.|.+.|++.++.+.++. .....++++++...... ..++ ..+..++++++|. +.+.+
T Consensus 4 a~~lv~~L~~~Gv~~vFgipG~~~~~~~~~~~~~i~~i~~~hE~~A~~~A~gyar~tg~~gv~~~t~GpG~~n~~~gl~~ 83 (186)
T d2ihta2 4 AHALLSRLRDHGVGKVFGVVGREAASILFDEVEGIDFVLTRHEFTAGVAADVLARITGRPQACWATLGPGMTNLSTGIAT 83 (186)
T ss_dssp HHHHHHHHHHTTCCEEEECCCGGGGTCCSCSSTTCEEEECSSHHHHHHHHHHHHHHHCSCEEEEECTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCEEEEECChhHHHHHHHHhcCCEEEEEccchhhHHHHHHHhhccCCcceeeccccccccchhhhhhH
Confidence 46789999999998888765532 22233456655443211 1110 1567788898885 45679
Q ss_pred HHHhCCCeeee
Q psy10186 68 AIHYGIPIIGV 78 (124)
Q Consensus 68 a~~~g~P~l~~ 78 (124)
|...+.|+|++
T Consensus 84 A~~~~~Pvl~i 94 (186)
T d2ihta2 84 SVLDRSPVIAL 94 (186)
T ss_dssp HHHHTCCEEEE
T ss_pred HHHhhccceee
Confidence 99999999998
>d1ydhb_ c.129.1.1 (B:) Hypothetical protein At5g11950 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: MCP/YpsA-like
superfamily: MCP/YpsA-like
family: MoCo carrier protein-like
domain: Hypothetical protein At5g11950
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=80.40 E-value=4.2 Score=24.40 Aligned_cols=28 Identities=14% Similarity=0.093 Sum_probs=20.1
Q ss_pred CCcceE-EecCChhhHHHHH---------HhCCCeeee
Q psy10186 51 PNCRLF-ISHGGVNSALEAI---------HYGIPIIGV 78 (124)
Q Consensus 51 ~~~d~~-i~~gG~~t~~ea~---------~~g~P~l~~ 78 (124)
..+|+| +-.||.||+-|.+ .+.+|.+++
T Consensus 97 ~~sdafIvlPGG~GTLdEl~e~l~l~ql~~~~kpiiil 134 (181)
T d1ydhb_ 97 QEAEAFIALPGGYGTMEELLEMITWSQLGIHKKTVGLL 134 (181)
T ss_dssp HHCSEEEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEE
T ss_pred HhCeeEEEeCCccchHHHHHHHHHHHHhcccCCCeEEE
Confidence 667875 5677889988764 456777766