Psyllid ID: psy10329

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600------
VRCLLSAIILNVKRVVKKRYEDLDSTILWLTNLLRLLNLLKQYSGEKAFQTDNTEVQNAQCLANFDFREYRQVLSDTGVQLESEVDELKTRLMNDREKYLSEIQGLQDKNIKLSECLSKTYSTDVSHTQDSSSTTSLESITPDHYLKIEVLKLVEENLKLKQALEVASASKDENEITRMIVEGSSSPPSLDEESMLGHHDSLIMSNSKLNVSVSNSCNVIRKKERTYLGMFEFEKSDINIIMKRLITDKFLEGISVVFNACNVIRKKERTYLGMFEFEKSDINIIMKRLITGLPAYIFFMCVRHTDYINDEEKVRCLLSAIILNVKRVVKKRYEDLDSTILWLTNLLRLLNLLKQYSGEKAFQTDNTEVQNAQCLANFDFREYRQVLSDTGVWIYQAVVRFMEEKINSIVIPAILEFESIPVMSSGKPSRLGRSESVGSSPGDLQALLMSFYKLLVLHGIDMEIINQVFKQLYYYIGASSLNNLLLRKELCHWTRGMQIRYNLSHLEQFTRDNKMADGEINEQLSPLIQASQLLQARKTQEDVNTVCEMCNKMSTNQLESLENELNRARTENADLRHVMLKENKMNFVTEDEQLLLAFETHKNIIR
cccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccccHHccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHccccccccccccccccccccHHHHHHHHHHHccccccccccHHHHHHHHHHHccccccccccccHHHHHHHHHHHccccccccccHHHHHHHHccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHccHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHcccccHHHHHHHHHHcccccccccccHHHHHHHHHHcccccHHHHHHcccccccccc
cHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccHHHHHcccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHcccccEccccccccccccccccccccccEEHHHccHHccHHHHHHHHHHHHHHHHHHHHHHHHcHHcHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHccccHHHHHHccEEEEccccHHHHHcccccccccccccccHHcHcccccccccccccHHcccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccHHHHHcccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHcHEEEEcHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccHHHHHHHHHHccHHHcccccHHHHHHHHHHcccccccccEEccccccccccc
VRCLLSAIILNVKRVVKKRYEDLDSTILWLTNLLRLLNLLKQysgekafqtdntevqnaqclanfDFREYRQVLSDTGVQLESEVDELKTRLMNDREKYLSEIQGLQdkniklseclsktystdvshtqdsssttslesitpdhYLKIEVLKLVEENLKLKQALEVASASKDENEITRMIvegsssppsldeesmlghhdslimsnsklnvsvsnsCNVIRKKERTYLGMFEFEKSDINIIMKRLITDKFLEGISVVFNACNVIRKKERTYLGMFEFEKSDINIIMKRLITGLPAYIFFMCVrhtdyindEEKVRCLLSAIILNVKRVVKKRYEDLDSTILWLTNLLRLLNLLKQysgekafqtdntevqnaqclanfDFREYRQVLSDTGVWIYQAVVRFMEEKINsivipailefesipvmssgkpsrlgrsesvgsspgDLQALLMSFYKLLVLHGIDMEIINQVFKQLYYYIGASSLNNLLLRKELCHWTRGMQIRYNLSHLeqftrdnkmadgeineqLSPLIQASQLLQARKTQEDVNTVCEMCNKMSTNQLESLENELNRARTENADLRHVMLKENKMNFVTEDEQLLLAFETHKNIIR
VRCLLSAIILNVKRVVKKRYEDLDSTILWLTNLLRLLNLLKQYSGEKAFQTDNTEVQNAQCLANFDFREYRQVLSdtgvqlesevDELKTRLMNDREKYLSEIQGLQDKNIKLSECLSKTystdvshtqdsssttslesitpdHYLKIEVLKLVEENLKLKQALEvasaskdeneitRMIVEGSSSPPSLDEESMLGHHDSLIMSNSKLNVSVSNSCNVirkkertylgmfefekSDINIIMKRLITDKFLEGISVVFNACNVIRKKERTYLGMFEFEKSDINIIMKRLITGLPAYIFFMCVRHTDYINDEEKVRCLLSAIILNVKRVVKKRYEDLDSTILWLTNLLRLLNLLKQYSGEKAFQTDNTEVQNAQCLANFDFREYRQVLSDTGVWIYQAVVRFMEEKINSIVIPAILEFESIPVMSSGKPSRLGRSESVGSSPGDLQALLMSFYKLLVLHGIDMEIINQVFKQLYYYIGASSLNNLLLRKELCHWTRGMQIRYNLSHLEQFTRDNKMADGEINEQLSPLIQASQLLQARKTQEDVNTVCEMCNKMSTNQLESLENELNRARTENADLRHVMLKENKMNFVTEDEQLLLAFETHKNIIR
VRCLLSAIILNVKRVVKKRYEDLDSTIlwltnllrllnllKQYSGEKAFQTDNTEVQNAQCLANFDFREYRQVLSDTGVQLESEVDELKTRLMNDREKYLSEIQGLQDKNIKLSECLSKTYSTDVSHTQDSSSTTSLESITPDHYlkievlklveenlklkQALEVASASKDENEITRMIVEGSSSPPSLDEESMLGHHDSLIMsnsklnvsvsnscnvIRKKERTYLGMFEFEKSDINIIMKRLITDKFLEGISVVFNACNVIRKKERTYLGMFEFEKSDINIIMKRLITGLPAYIFFMCVRHTDYINDEEKVRCLLSAIILNVKRVVKKRYEDLDSTIlwltnllrllnllKQYSGEKAFQTDNTEVQNAQCLANFDFREYRQVLSDTGVWIYQAVVRFMEEKINSIVIPAILEFESIPVMSSGKPSRLGRSESVGSSPGDLQALLMSFYKLLVLHGIDMEIINQVFKQLYYYIGASSLNNLLLRKELCHWTRGMQIRYNLSHLEQFTRDNKMADGEINEQLSPLIQASQLLQARKTQEDVNTVCEMCNKMSTNQLESLENELNRARTENADLRHVMLKENKMNFVTEDEQLLLAFETHKNIIR
**CLLSAIILNVKRVVKKRYEDLDSTILWLTNLLRLLNLLKQYSGEKAFQTDNTEVQNAQCLANFDFREYRQVLSDTGVQLE****************YL**I*******I******************************PDHYLKIEVLKLVEENLKLKQ***********************************************NVSVSNSCNVIRKKERTYLGMFEFEKSDINIIMKRLITDKFLEGISVVFNACNVIRKKERTYLGMFEFEKSDINIIMKRLITGLPAYIFFMCVRHTDYINDEEKVRCLLSAIILNVKRVVKKRYEDLDSTILWLTNLLRLLNLLKQYSGEKAFQTDNTEVQNAQCLANFDFREYRQVLSDTGVWIYQAVVRFMEEKINSIVIPAILEFESIP**********************LQALLMSFYKLLVLHGIDMEIINQVFKQLYYYIGASSLNNLLLRKELCHWTRGMQIRYNLSHLEQFT**********************************TVCEM****************************VMLK*NKMNFVTEDEQLLLAFE*******
**CLLSAIILNVKRVVKKRYEDLDSTILWLTNLLRLLNLLKQY***************************************************************************************************************************************************************************************************************************************FEFEKSDINIIMKRLITGLPAYIFFMCVRHTDYINDEEKVRCLLSAIILNVKRVVKKRYEDLDSTILWLTNLLRLLNLLKQYSGE*****************NFDFREYRQVLSDTGVWIYQAVVRFMEEKINSIVIPAI*****************************LQALLMSFYKLLVLHGIDMEIINQVFKQLYYYIGASSLNNLLLRKELCHWTRGMQIRYNLSHLEQFTRDNKMADGEINEQLSPLIQASQLLQARKTQEDVNTVCEMCNKMSTNQLESLENELNRARTENAD************************E**KN***
VRCLLSAIILNVKRVVKKRYEDLDSTILWLTNLLRLLNLLKQYSGEKAFQTDNTEVQNAQCLANFDFREYRQVLSDTGVQLESEVDELKTRLMNDREKYLSEIQGLQDKNIKLSECLSK*******************SITPDHYLKIEVLKLVEENLKLKQALEVASASKDENEITRMIVEG**********SMLGHHDSLIMSNSKLNVSVSNSCNVIRKKERTYLGMFEFEKSDINIIMKRLITDKFLEGISVVFNACNVIRKKERTYLGMFEFEKSDINIIMKRLITGLPAYIFFMCVRHTDYINDEEKVRCLLSAIILNVKRVVKKRYEDLDSTILWLTNLLRLLNLLKQYSGEKAFQTDNTEVQNAQCLANFDFREYRQVLSDTGVWIYQAVVRFMEEKINSIVIPAILEFESIPVM*****************PGDLQALLMSFYKLLVLHGIDMEIINQVFKQLYYYIGASSLNNLLLRKELCHWTRGMQIRYNLSHLEQFTRDNKMADGEINEQLSPLIQASQLL********VNTVCEMCNKMSTNQLESLENELNRARTENADLRHVMLKENKMNFVTEDEQLLLAFETHKNIIR
VRCLLSAIILNVKRVVKKRYEDLDSTILWLTNLLRLLNLLKQYSGEKAFQTDNTEVQNAQCLANFDFREYRQVLSDTGVQLESEVDELKTRLMNDREKYLSEIQGLQDKNIKLS*****************SSTTSLESITPDHYLKIEVLKLVEENLKLKQALEVASASKDENEITRMIVEGSSSPPSLDEESMLGHHDSLIMSNSKLNVSVSNSCNVIRKKERTYLGMFEFEKSDINIIMKRLITDKFLEGISVVFNACNVIRKKERTYLGMFEFEKSDINIIMKRLITGLPAYIFFMCVRHTDYINDEEKVRCLLSAIILNVKRVVKKRYEDLDSTILWLTNLLRLLNLLKQYSGEKAFQTDNTEVQNAQCLANFDFREYRQVLSDTGVWIYQAVVRFMEEKINSIVIPAILEFESIPVM*************VGSSPGDLQALLMSFYKLLVLHGIDMEIINQVFKQLYYYIGASSLNNLLLRKELCHWTRGMQIRYNLSHLEQFTRDNKMADGEINEQLSPLIQASQLLQARKTQEDVNTVCEMCNKMSTNQLESLENELNRARTENADLRHVMLKENKMNFV****QLLLA**TH***I*
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VRCLLSAIILNVKRVVKKRYEDLDSTILWLTNLLRLLNLLKQYSGEKAFQTDNTEVQNAQCLANFDFREYRQVLSDTxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxNIKLSECLSKTYSTDVSHTQDSSSTTSLESITPDHYLKIEVLKLVEENLKLKQALEVASASKDENEITRMIVEGSSSPPSLDEESMLGHHDSLIMSNSKLNVSVSNSCNVIRKKERTYLGMFEFEKSDINIIMKRLITDKFLEGISVVFNACNVIRKKERTYLGMFEFEKSDINIIMKRLITGLPAYIFFMCVRHTDYINDEEKVRCLLSAIILNVKRVVKKRYEDLDSTILWLTNLLRLLNLLKQYSGEKAFQTDNTEVQNAQCLANFDFREYRQVLSDTGVWIYQAVVRFMEEKINSIVIPAILEFESIPVMSSGKPSRLGRSESVGSSPGDLQALLMSFYKLLVLHGIDMEIINQVFKQLYYYIGASSLNNLLLRKELCHWTRGMQIRYNLSHLEQFTRDNKMADGEINEQLSPLIQASQLLQARKTQEDVNTVCEMCxxxxxxxxxxxxxxxxxxxxxxxxxxxxMLKENKMNFVTEDEQLLLAFETHKNIIR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query606 2.2.26 [Sep-21-2011]
Q024401829 Unconventional myosin-Va yes N/A 0.486 0.161 0.461 3e-78
Q9Y4I11855 Unconventional myosin-Va yes N/A 0.486 0.159 0.458 9e-78
Q991041853 Unconventional myosin-Va yes N/A 0.486 0.159 0.452 3e-77
Q9QYF31828 Unconventional myosin-Va yes N/A 0.486 0.161 0.445 3e-76
Q9ULV01848 Unconventional myosin-Vb no N/A 0.486 0.159 0.433 1e-71
P705691846 Unconventional myosin-Vb no N/A 0.488 0.160 0.441 2e-71
P212711818 Unconventional myosin-Vb no N/A 0.488 0.162 0.434 2e-70
Q9NQX41742 Unconventional myosin-Vc no N/A 0.478 0.166 0.391 1e-59
P195241574 Myosin-2 OS=Saccharomyces yes N/A 0.458 0.176 0.230 3e-14
Q876G91568 Myosin-2 OS=Saccharomyces N/A N/A 0.544 0.210 0.222 8e-14
>sp|Q02440|MYO5A_CHICK Unconventional myosin-Va OS=Gallus gallus GN=MYO5A PE=1 SV=1 Back     alignment and function desciption
 Score =  293 bits (749), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 145/314 (46%), Positives = 204/314 (64%), Gaps = 19/314 (6%)

Query: 264  IRKKERTYLGMFEFEKSDINIIMKRLI-------------TGLPAYIFFMCVRHTDYIND 310
            I +KE+ + GM E++K D   ++K LI              GLPAYI FMCVRH DY+ND
Sbjct: 1440 IPRKEKDFQGMLEYKKEDEQKLVKNLILELKPRGVAVNLIPGLPAYILFMCVRHADYLND 1499

Query: 311  EEKVRCLLSAIILNVKRVVKKRYEDLDSTILWLTNLLRLLNLLKQYSGEKAFQTDNTEVQ 370
            ++KVR LL++ I  +K+V+KKR +D ++   WL+N  R L+ LKQYSGE+ F   NT  Q
Sbjct: 1500 DQKVRSLLTSTINGIKKVLKKRGDDFETVSFWLSNTCRFLHCLKQYSGEEGFMKHNTPRQ 1559

Query: 371  NAQCLANFDFREYRQVLSDTGVWIYQAVVRFMEEKINSIVIPAILEFESIPVMSSGKPSR 430
            N  CL NFD  EYRQVLSD  + IYQ +VR +E  +  +++  +LE E+I  +S  KP+ 
Sbjct: 1560 NEHCLTNFDLAEYRQVLSDLAIQIYQQLVRVLENILQPMIVSGMLEHETIQGVSGVKPTG 1619

Query: 431  LGRSESVGSSPG--DLQAL---LMSFYKLLVLHGIDMEIINQVFKQLYYYIGASSLNNLL 485
            L +  S  +  G   L ++   L SF+ ++  HG+D E+I QV KQ++Y IGA +LNNLL
Sbjct: 1620 LRKRTSSIADEGTYTLDSIIRQLNSFHSVMCQHGMDPELIKQVVKQMFYIIGAVTLNNLL 1679

Query: 486  LRKELCHWTRGMQIRYNLSHLEQFTRDNKMADGEINEQLSPLIQASQLLQA-RKTQEDVN 544
            LRK++C W++GMQIRYN+S LE++ RD  + +    E L PLIQA+QLLQ  +KT ED  
Sbjct: 1680 LRKDMCSWSKGMQIRYNVSQLEEWLRDKNLMNSGAKETLEPLIQAAQLLQVKKKTDEDAE 1739

Query: 545  TVCEMCNKMSTNQL 558
             +C MCN ++T Q+
Sbjct: 1740 AICSMCNALTTAQI 1753
Processive actin-based motor that can move in large steps approximating the 36-nm pseudo-repeat of the actin filament. May be involved in melanosome transport, or alternatively, it may be required for some polarization process involved in dendrite formation.
Gallus gallus (taxid: 9031)
>sp|Q9Y4I1|MYO5A_HUMAN Unconventional myosin-Va OS=Homo sapiens GN=MYO5A PE=1 SV=2 Back     alignment and function description
>sp|Q99104|MYO5A_MOUSE Unconventional myosin-Va OS=Mus musculus GN=Myo5a PE=1 SV=2 Back     alignment and function description
>sp|Q9QYF3|MYO5A_RAT Unconventional myosin-Va OS=Rattus norvegicus GN=Myo5a PE=1 SV=1 Back     alignment and function description
>sp|Q9ULV0|MYO5B_HUMAN Unconventional myosin-Vb OS=Homo sapiens GN=MYO5B PE=1 SV=3 Back     alignment and function description
>sp|P70569|MYO5B_RAT Unconventional myosin-Vb OS=Rattus norvegicus GN=Myo5b PE=1 SV=1 Back     alignment and function description
>sp|P21271|MYO5B_MOUSE Unconventional myosin-Vb OS=Mus musculus GN=Myo5b PE=2 SV=2 Back     alignment and function description
>sp|Q9NQX4|MYO5C_HUMAN Unconventional myosin-Vc OS=Homo sapiens GN=MYO5C PE=1 SV=2 Back     alignment and function description
>sp|P19524|MYO2_YEAST Myosin-2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MYO2 PE=1 SV=1 Back     alignment and function description
>sp|Q876G9|MYO2_SACBA Myosin-2 OS=Saccharomyces bayanus GN=MYO2 PE=3 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query606
427793967 1500 Putative myosin, partial [Rhipicephalus 0.495 0.2 0.538 1e-100
303387470 1776 myosin Va [Eriocheir sinensis] 0.488 0.166 0.536 7e-98
91087053 1832 PREDICTED: similar to myosin VA (heavy p 0.493 0.163 0.536 8e-97
242004845 1754 myosin-5A, putative [Pediculus humanus c 0.481 0.166 0.536 2e-92
332017573 1700 Myosin-Va [Acromyrmex echinatior] 0.475 0.169 0.540 2e-92
307185093 1832 Myosin-Va [Camponotus floridanus] 0.475 0.157 0.544 5e-92
380013651 1852 PREDICTED: LOW QUALITY PROTEIN: unconven 0.557 0.182 0.494 5e-89
350426534 1851 PREDICTED: myosin-Va-like [Bombus impati 0.709 0.232 0.420 9e-89
340723794 1851 PREDICTED: myosin-Va-like [Bombus terres 0.481 0.157 0.555 2e-88
443684084 1795 hypothetical protein CAPTEDRAFT_225225 [ 0.495 0.167 0.487 8e-88
>gi|427793967|gb|JAA62435.1| Putative myosin, partial [Rhipicephalus pulchellus] Back     alignment and taxonomy information
 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 174/323 (53%), Positives = 237/323 (73%), Gaps = 23/323 (7%)

Query: 264  IRKKERTYLGMFEFEKSDINIIMKRLI------------TGLPAYIFFMCVRHTDYINDE 311
            I+ K+  YLGMFE++  D NII+K LI             GLPAYI FMC+RHTDYIND+
Sbjct: 1101 IKHKDAEYLGMFEYKAEDENIIIKNLIIDLKPKLAVTLLPGLPAYILFMCIRHTDYINDD 1160

Query: 312  EKVRCLLSAIILNVKRVVKKRYEDLDSTILWLTNLLRLLNLLKQYSGEKAFQTDNTEVQN 371
            EKV+ LL+ I+  +++V+KKR+ED D T++WL N  R ++ LKQYSGEK FQ +NT  QN
Sbjct: 1161 EKVKSLLNNIVFGIRKVIKKRHEDTDYTVMWLANTCRFMHNLKQYSGEKQFQVENTPKQN 1220

Query: 372  AQCLANFDFREYRQVLSDTGVWIYQAVVRFMEEKINSIVIPAILEFESIPVMSSGKPSRL 431
             QCL NFD  +YRQV+SD  VWIYQAV++ MEEK+  +++PA+LE E+I  +S  KP  +
Sbjct: 1221 EQCLRNFDLSQYRQVMSDIAVWIYQAVIKSMEEKVQPLIVPAVLEHEAIAGISGNKPCGM 1280

Query: 432  -GRSESVG---SSPGDLQ-AL------LMSFYKLLVLHGIDMEIINQVFKQLYYYIGASS 480
              R+ S+     SP D Q AL      L SFYK+L++HG+D E+I QVFKQL+Y+I A +
Sbjct: 1281 RSRASSLARDLESPVDPQHALDVLLKELNSFYKVLLVHGVDPELITQVFKQLFYFICAGA 1340

Query: 481  LNNLLLRKELCHWTRGMQIRYNLSHLEQFTRDNKMADGEINEQLSPLIQASQLLQARKTQ 540
            LNNLLLRK++CHW++GMQ+RYNLSHLEQ+ RD K++  E+ + L P++QASQLLQARKT 
Sbjct: 1341 LNNLLLRKDMCHWSKGMQMRYNLSHLEQWCRDQKVSQSEVLDTLQPIVQASQLLQARKTD 1400

Query: 541  EDVNTVCEMCNKMSTNQLESLEN 563
            EDV+++C+MC+K++T Q+  + N
Sbjct: 1401 EDVSSICDMCDKLTTAQITKILN 1423

Source: Rhipicephalus pulchellus

Species: Rhipicephalus pulchellus

Genus: Rhipicephalus

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|303387470|gb|ADM15669.1| myosin Va [Eriocheir sinensis] Back     alignment and taxonomy information
>gi|91087053|ref|XP_974649.1| PREDICTED: similar to myosin VA (heavy polypeptide 12, myoxin) [Tribolium castaneum] Back     alignment and taxonomy information
>gi|242004845|ref|XP_002423287.1| myosin-5A, putative [Pediculus humanus corporis] gi|212506289|gb|EEB10549.1| myosin-5A, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|332017573|gb|EGI58273.1| Myosin-Va [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|307185093|gb|EFN71292.1| Myosin-Va [Camponotus floridanus] Back     alignment and taxonomy information
>gi|380013651|ref|XP_003690864.1| PREDICTED: LOW QUALITY PROTEIN: unconventional myosin-Va-like [Apis florea] Back     alignment and taxonomy information
>gi|350426534|ref|XP_003494466.1| PREDICTED: myosin-Va-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|340723794|ref|XP_003400273.1| PREDICTED: myosin-Va-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|443684084|gb|ELT88116.1| hypothetical protein CAPTEDRAFT_225225 [Capitella teleta] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query606
ZFIN|ZDB-GENE-041027-21891 myo5aa "myosin VAa" [Danio rer 0.549 0.176 0.403 2.4e-69
UNIPROTKB|F8WE881852 MYO5A "Unconventional myosin-V 0.653 0.213 0.368 8.2e-68
UNIPROTKB|Q9Y4I11855 MYO5A "Unconventional myosin-V 0.653 0.213 0.368 8.2e-68
UNIPROTKB|F1NK421853 MYO5A "Unconventional myosin-V 0.650 0.212 0.372 1.7e-67
UNIPROTKB|F1NK411857 MYO5A "Unconventional myosin-V 0.650 0.212 0.372 1.7e-67
UNIPROTKB|G3V3941853 MYO5A "Unconventional myosin-V 0.495 0.161 0.438 2.2e-67
UNIPROTKB|F1RZD21896 MYO5A "Uncharacterized protein 0.495 0.158 0.435 2.6e-67
UNIPROTKB|J9P7891721 MYO5A "Uncharacterized protein 0.653 0.230 0.363 2.6e-67
UNIPROTKB|F1Q4E31860 MYO5A "Uncharacterized protein 0.655 0.213 0.366 2.8e-67
UNIPROTKB|F1MHT31859 F1MHT3 "Uncharacterized protei 0.495 0.161 0.435 2.9e-67
ZFIN|ZDB-GENE-041027-2 myo5aa "myosin VAa" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
 Score = 658 (236.7 bits), Expect = 2.4e-69, Sum P(4) = 2.4e-69
 Identities = 143/354 (40%), Positives = 212/354 (59%)

Query:   264 IRKKERTYLGMFEFEKSDI-----NIIMK--------RLITGLPAYIFFMCVRHTDYIND 310
             I ++E+ + GM E++K D      NII++         LI GLPAYI FMC+RH DYIND
Sbjct:  1502 IPRREKDFQGMLEYKKEDELKLVKNIILELKPRGVAVNLIPGLPAYILFMCLRHADYIND 1561

Query:   311 EEKVRCLLSAIILNVKRVVKKRYEDLDSTIXXXXXXXXXXXXXKQYSGEKAFQTDNTEVQ 370
             ++KVR LL+++I ++K+++KKR +D ++               KQYSG++ F   N+  Q
Sbjct:  1562 DQKVRSLLTSVINSIKKILKKRGDDFETVSFWLANTCRFLHCLKQYSGDEQFMKHNSPKQ 1621

Query:   371 NAQCLANFDFREYRQVLSDTGVWIYQAVVRFMEEKINSIVIPAILEFESIPVMSSGKPSR 430
             N  CL+NFD  EYRQVLSD  + IYQ +++ ME  +  +++  +LE E+I  +S  KP+ 
Sbjct:  1622 NEHCLSNFDLAEYRQVLSDLAIQIYQQLIKCMENILQPMIVSGMLEHETIQGVSGVKPTG 1681

Query:   431 LGRSESVGSSPGD--LQAL---LMSFYKLLVLHGIDMEIINQVFKQLYYYIGASSLNNLL 485
             L +  S  +  G   L ++   L +F+ ++  HG D E+I QV KQ +Y IGA +LNNLL
Sbjct:  1682 LRKRTSSIADEGTYTLDSIIRQLNTFHSIMCHHGTDPELIKQVVKQQFYIIGAVTLNNLL 1741

Query:   486 LRKELCHWTRGMQIRYNLSHLEQFTRDNKMADGEINEQLSPLIQASQLLQARK-TQEDVN 544
             LRK++C W++GMQIRYN+S LE++ RD  +      E L PLIQA+QLLQ +K T ED  
Sbjct:  1742 LRKDMCSWSKGMQIRYNVSQLEEWLRDKNLMTCGAKETLEPLIQAAQLLQVKKKTDEDAE 1801

Query:   545 TVCEMCNKMSTNQLESLENELN--RARTENADLRHVMLKENKMNFVTEDEQLLL 596
              +C MCN +ST Q+  + N      A  E   +  +   + ++    E  QLL+
Sbjct:  1802 AICSMCNALSTAQIVKVLNLYTPVNAFEERVSVLFIRTIQTRLRDRKESPQLLM 1855
GO:0005524 "ATP binding" evidence=IEA
GO:0016459 "myosin complex" evidence=IEA
GO:0003774 "motor activity" evidence=IEA
GO:0000166 "nucleotide binding" evidence=IEA
UNIPROTKB|F8WE88 MYO5A "Unconventional myosin-Va" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q9Y4I1 MYO5A "Unconventional myosin-Va" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1NK42 MYO5A "Unconventional myosin-Va" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1NK41 MYO5A "Unconventional myosin-Va" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|G3V394 MYO5A "Unconventional myosin-Va" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1RZD2 MYO5A "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|J9P789 MYO5A "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1Q4E3 MYO5A "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1MHT3 F1MHT3 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query606
pfam01843105 pfam01843, DIL, DIL domain 7e-29
COG50221463 COG5022, COG5022, Myosin heavy chain [Cytoskeleton 1e-05
>gnl|CDD|216736 pfam01843, DIL, DIL domain Back     alignment and domain information 
 Score =  110 bits (277), Expect = 7e-29
 Identities = 42/93 (45%), Positives = 61/93 (65%), Gaps = 2/93 (2%)

Query: 467 QVFKQLYYYIGASSLNNLLLRKELCHWTRGMQIRYNLSHLEQFTRDNKMADGEINEQLSP 526
           Q+F QL+Y+I A   N+LLLR++ C W+RG+QIRYNLS LE + R   + +    E L P
Sbjct: 1   QLFSQLFYFINAQLFNSLLLRRDFCSWSRGLQIRYNLSLLEDWCRSAGLEEA-AWEHLEP 59

Query: 527 LIQASQLLQARK-TQEDVNTVCEMCNKMSTNQL 558
           L QA  LLQ +K T ED+  +C++C  ++  Q+
Sbjct: 60  LRQAVNLLQIKKSTIEDIEILCDLCPALNPAQI 92

The DIL domain has no known function. Length = 105
>gnl|CDD|227355 COG5022, COG5022, Myosin heavy chain [Cytoskeleton] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 606
KOG1892|consensus 1629 100.0
PF01843105 DIL: DIL domain; InterPro: IPR018444 Dilute encode 99.97
COG50221463 Myosin heavy chain [Cytoskeleton] 99.35
PF04091311 Sec15: Exocyst complex subunit Sec15-like ; InterP 96.69
PF04437494 RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR00 92.14
KOG1892|consensus 1629 86.92
PF05700221 BCAS2: Breast carcinoma amplified sequence 2 (BCAS 85.61
>KOG1892|consensus Back     alignment and domain information 
Probab=100.00  E-value=1.6e-38  Score=353.04  Aligned_cols=284  Identities=20%  Similarity=0.287  Sum_probs=239.9

Q ss_pred             cccceeecccHHHHHHhhhhcccccccchhcchhhhhhhhhcccccccccccchHHHHHHhhccCh-hHHHHHHHHHhhh
Q psy10329        228 LGMFEFEKSDINIIMKRLITDKFLEGISVVFNACNVIRKKERTYLGMFEFEKSDINIIMKRLITGL-PAYIFFMCVRHTD  306 (606)
Q Consensus       228 ~g~le~~~~de~~~l~~li~dl~p~~~~~~~~~~~~~~~~~~~~~qml~f~~~Dl~~i~~~L~P~~-PAyiLfmciR~ad  306 (606)
                      ...+||+...++-+|..||. -+..++                               .+++.|.+ |+|-.+...+-. 
T Consensus       540 ~~si~~~d~~~~sfL~~vi~-~~a~t~-------------------------------~~~~s~~y~y~~S~~yrp~~~-  586 (1629)
T KOG1892|consen  540 GASIEFRDSSEDSFLSAVIN-TNASTV-------------------------------HFKLSPTYRYVLSNQYRPDIS-  586 (1629)
T ss_pred             ccceecccCcHHHHHHHHHh-Cccccc-------------------------------ccccCcccchhhhcccccccC-
Confidence            34599999999999999987 344444                               23332221 222221111111 


Q ss_pred             hcCChHHHHHHHHHHHHHHHHHHHhhcCCcccchhHHHhHHHHHHHHhhhcccccccccchhhhhhhhccccchHHHHHH
Q psy10329        307 YINDEEKVRCLLSAIILNVKRVVKKRYEDLDSTILWLTNLLRLLNLLKQYSGEKAFQTDNTEVQNAQCLANFDFREYRQV  386 (606)
Q Consensus       307 ~~~d~~~l~~LL~~ii~~Ik~vv~~~~~Dl~~lafWLSN~~eLL~fLkq~s~~~~f~~~nt~~Qn~~~L~~fdl~E~~~~  386 (606)
                      ..--..++..|+++++++++.|+++...+-..|+|||||+++|+||+|+|.+...|..                 ..+.+
T Consensus       587 pTer~hk~i~f~~~~~s~~~~viQeq~~~~~~LaFWmANaSEflhfik~Dr~ls~~~~-----------------~aq~v  649 (1629)
T KOG1892|consen  587 PTERTHKVIAFVNKMVSMMEGVIQEQKNIAGALAFWMANASEFLHFIKQDRDLSRITL-----------------DAQDV  649 (1629)
T ss_pred             ccccchhHHHHHHHHHHHHHHHHHHhhcccchhHHhhcCHHHHHHHHHhccchhheeh-----------------hHHHH
Confidence            1122578999999999999999999988888999999999999999999988766542                 46789


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCCcccCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHhcCCCHHHHH
Q psy10329        387 LSDTGVWIYQAVVRFMEEKINSIVIPAILEFESIPVMSSGKPSRLGRSESVGSSPGDLQALLMSFYKLLVLHGIDMEIIN  466 (606)
Q Consensus       387 L~dLi~~iy~~li~~i~k~L~~livpAiLe~esi~g~~~~k~~g~kR~~s~~~s~~~i~~IL~~~~~lL~~~~V~p~Li~  466 (606)
                      |+.+|+.+|..||.|++..|.+ -.||+|+.+....-                ....+..+|+.+|.+|+.|+|+++|++
T Consensus       650 la~~vq~aFr~LV~clqsel~~-~~~afLden~~~~~----------------a~gdVlh~L~~aM~llRrCrvNAALTI  712 (1629)
T KOG1892|consen  650 LAHLVQMAFRYLVHCLQSELNN-YMPAFLDENSLQRP----------------AIGDVLHTLTGAMSLLRRCRVNAALTI  712 (1629)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH-HHHHHhhhccccCc----------------cccchHHHhHHHHHHHHHhccchHHHH
Confidence            9999999999999999999999 48999986644421                134577889999999999999999999


Q ss_pred             HHHHHHHHhhhHHHHHHHhhc--CcccccchhhHHHhchhHHHHHHHhCCCCcchHHhhchhHHHHHhhhhccC-chhhH
Q psy10329        467 QVFKQLYYYIGASSLNNLLLR--KELCHWTRGMQIRYNLSHLEQFTRDNKMADGEINEQLSPLIQASQLLQARK-TQEDV  543 (606)
Q Consensus       467 QlFsQLF~fIna~lFN~LLlr--k~~cswskG~QIR~NLS~LEeW~r~~gL~~~~a~~~L~pL~QAaqLLQ~~K-T~~D~  543 (606)
                      |+|+|||||||+++||+|+..  ..+|+-.||.-|++.|..||.||+.+|+ +.+|.|||.+|+||++||+++| ..+|+
T Consensus       713 QLfsqLfH~iN~~~FN~lVt~~~s~~cs~~wGk~~~~rl~~ie~waErqGl-ElAAdCHL~ri~Qaa~lL~~~K~a~ddi  791 (1629)
T KOG1892|consen  713 QLFSQLFHFINMWLFNRLVTDPDSGLCSHYWGKIIRQRLGHIEAWAERQGL-ELAADCHLSRIVQAATLLTMDKYAPDDI  791 (1629)
T ss_pred             HHHHHHHHHHHHHHhhhhcccCchhhhhhhHHHHHHHHHHHHHHHHHHhcc-hHhhhccHHHHHHHHHHHhccccChhhH
Confidence            999999999999999999999  5799999999999999999999999999 8999999999999999999999 89999


Q ss_pred             HHHHhhcccCCHHHHHHHHhcCCCC----CCCchHHhhhh
Q psy10329        544 NTVCEMCNKMSTNQLESLENELNRA----RTENADLRHVM  579 (606)
Q Consensus       544 ~si~~~C~~Ln~~QL~kIL~~Y~p~----rV~~~fI~~v~  579 (606)
                      ..|..+|++||+.|+.+||+.|.|+    .+|.+++..+.
T Consensus       792 ~~l~stCfkLNSLQ~~alLq~~~~~~~e~~~p~dlvd~v~  831 (1629)
T KOG1892|consen  792 PNLNSTCFKLNSLQLQALLQNYHCAPDEPFIPTDLVDNVV  831 (1629)
T ss_pred             HhhccchhhcchHHHHHHHhcCCCCCCCCCCchHHHHHHH
Confidence            9999999999999999999999988    78989888764

>PF01843 DIL: DIL domain; InterPro: IPR018444 Dilute encodes a novel type of myosin heavy chain, with a tail, or C-terminal, region that has elements of both type II (alpha-helical coiled-coil) and type I (non-coiled-coil) myosin heavy chains Back     alignment and domain information
>COG5022 Myosin heavy chain [Cytoskeleton] Back     alignment and domain information
>PF04091 Sec15: Exocyst complex subunit Sec15-like ; InterPro: IPR007225 Sec15 is a component of the exocyst complex involved in the docking of exocystic vesicles with a fusion site on the plasma membrane Back     alignment and domain information
>PF04437 RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR007528 This family includes RINT-1, a Rad50 interacting protein which participates in radiation induced checkpoint control [], that interacts with Rad50 only during late S and G2/M phases Back     alignment and domain information
>KOG1892|consensus Back     alignment and domain information
>PF05700 BCAS2: Breast carcinoma amplified sequence 2 (BCAS2); InterPro: IPR008409 This family consists of several eukaryotic sequences of unknown function Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query606
2f6h_X419 Myosin V Cargo Binding Domain Length = 419 5e-14
>pdb|2F6H|X Chain X, Myosin V Cargo Binding Domain Length = 419 Back     alignment and structure 
Iteration: 1

 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 98/192 (51%), Gaps = 11/192 (5%)
Query: 392 VWIYQAVVRFMEEKINSIVIPAILEFESIPVMSSGKPSRLGRSESVGS---SPGDLQALL 448
           +W+ +   +  ++ IN++VI      ES+P  S+G+ S         +   +  D+    
Sbjct: 157 IWLKKLQKQLQKKAINAVVIS-----ESLPGFSAGETSGFLNKIFANTEEYTMDDILTFF 211
Query: 449 MSFYKLLVLHGIDMEIINQVFKQLYYYIGASSLNNLLLRKELCHWTRGMQIRYNLSHLEQ 508
            S Y  +    I+ E+ + V   L  Y+ A   N L++++    W RG+Q+ YN++ LE+
Sbjct: 212 NSIYWCMKSFHIENEVFHAVVTTLLNYVDAICFNELIMKRNFLSWKRGLQLNYNVTRLEE 271
Query: 509 FTRDNKMADGEINEQLSPLIQASQLLQARK-TQEDVNTVCEMCNKMSTNQLESLENELNR 567
           + + + + DG   E L  LIQ ++LLQ RK T ED++ +  +C  ++  QL+ L ++   
Sbjct: 272 WCKTHGLTDG--TECLQHLIQTAKLLQVRKYTIEDIDILRGICYSLTPAQLQKLISQYQV 329
Query: 568 ARTENADLRHVM 579
           A  E+   + ++
Sbjct: 330 ADYESPIPQEIL 341

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query606
2f6h_X419 Myosin-2, type V myosin; mysoin V, cargo binding, 2e-58
2f6h_X419 Myosin-2, type V myosin; mysoin V, cargo binding, 5e-05
3mmi_A386 Myosin-4; globular tail, dilute domain, motor prot 1e-56
3mmi_A386 Myosin-4; globular tail, dilute domain, motor prot 8e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-13
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-10
>2f6h_X Myosin-2, type V myosin; mysoin V, cargo binding, cargo transport, vacuole binding, secreatory vescIle binding, structural protein; 2.25A {Saccharomyces cerevisiae} Length = 419 Back     alignment and structure
 Score =  200 bits (510), Expect = 2e-58
 Identities = 65/326 (19%), Positives = 139/326 (42%), Gaps = 32/326 (9%)

Query: 264 IRKKERTYLGMFEFEKSDINIIMKRLITGL------------------PAYIFFMCVRHT 305
             +       + E  +     I + L+ G                   PA I  + +   
Sbjct: 2   ATQINEELYRLLEDTEILNQEITEGLLKGFEVPDAGVAIQLSKRDVVYPARILIIVLSEM 61

Query: 306 DYINDEEKVRCLLSAIILNVKRVVKKRYED--LDSTILWLTNLLRLLNLL----KQYSGE 359
                 ++    L+ ++  +++VV +   +  + S + WL N+  L + +         E
Sbjct: 62  WRFGLTKQSESFLAQVLTTIQKVVTQLKGNDLIPSGVFWLANVRELYSFVVFALNSILTE 121

Query: 360 KAFQTDNTEVQNAQCLANFDFREYRQVLSDTGVWIYQAVVRFMEEKINSIVIPAILEFES 419
           + F+   T+ +  + ++     E +         IY   ++ +++++    I A++  ES
Sbjct: 122 ETFKNGMTDEEYKEYVSLVT--ELKDDFEALSYNIYNIWLKKLQKQLQKKAINAVVISES 179

Query: 420 IPVMSSGKPSRLGR---SESVGSSPGDLQALLMSFYKLLVLHGIDMEIINQVFKQLYYYI 476
           +P  S+G+ S       + +   +  D+     S Y  +    I+ E+ + V   L  Y+
Sbjct: 180 LPGFSAGETSGFLNKIFANTEEYTMDDILTFFNSIYWCMKSFHIENEVFHAVVTTLLNYV 239

Query: 477 GASSLNNLLLRKELCHWTRGMQIRYNLSHLEQFTRDNKMADGEINEQLSPLIQASQLLQA 536
            A   N L++++    W RG+Q+ YN++ LE++ + + +   +  E L  LIQ ++LLQ 
Sbjct: 240 DAICFNELIMKRNFLSWKRGLQLNYNVTRLEEWCKTHGL--TDGTECLQHLIQTAKLLQV 297

Query: 537 RK-TQEDVNTVCEMCNKMSTNQLESL 561
           RK T ED++ +  +C  ++  QL+ L
Sbjct: 298 RKYTIEDIDILRGICYSLTPAQLQKL 323
>2f6h_X Myosin-2, type V myosin; mysoin V, cargo binding, cargo transport, vacuole binding, secreatory vescIle binding, structural protein; 2.25A {Saccharomyces cerevisiae} Length = 419 Back     alignment and structure
>3mmi_A Myosin-4; globular tail, dilute domain, motor protein; 2.30A {Saccharomyces cerevisiae} Length = 386 Back     alignment and structure
>3mmi_A Myosin-4; globular tail, dilute domain, motor protein; 2.30A {Saccharomyces cerevisiae} Length = 386 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query606
2f6h_X419 Myosin-2, type V myosin; mysoin V, cargo binding, 100.0
3mmi_A386 Myosin-4; globular tail, dilute domain, motor prot 100.0
3mmi_A386 Myosin-4; globular tail, dilute domain, motor prot 98.64
2f6h_X419 Myosin-2, type V myosin; mysoin V, cargo binding, 98.59
2a2f_X325 Exocyst complex component SEC15; all helical struc 92.41
2fji_1399 Exocyst complex component SEC6; exocytosis, tandem 86.51
>2f6h_X Myosin-2, type V myosin; mysoin V, cargo binding, cargo transport, vacuole binding, secreatory vescIle binding, structural protein; 2.25A {Saccharomyces cerevisiae} Back     alignment and structure
Probab=100.00  E-value=5.5e-63  Score=534.88  Aligned_cols=324  Identities=21%  Similarity=0.334  Sum_probs=267.9

Q ss_pred             cccccceeecccHHHHHHhhhhccc--ccccchhcchhhhhhhhhcccccccccccchHHHHHHhhccChhHHHHHHHHH
Q psy10329        226 TYLGMFEFEKSDINIIMKRLITDKF--LEGISVVFNACNVIRKKERTYLGMFEFEKSDINIIMKRLITGLPAYIFFMCVR  303 (606)
Q Consensus       226 ~~~g~le~~~~de~~~l~~li~dl~--p~~~~~~~~~~~~~~~~~~~~~qml~f~~~Dl~~i~~~L~P~~PAyiLfmciR  303 (606)
                      +...+|||.+.-.+.+++.+|..++  +.++    ..++                        ..-.+.+|||+||+|+|
T Consensus         8 ~~~~ll~~~~~~~~ei~~~l~~~~~ip~~~~----~~~~------------------------~~~~~l~PA~il~~cl~   59 (419)
T 2f6h_X            8 ELYRLLEDTEILNQEITEGLLKGFEVPDAGV----AIQL------------------------SKRDVVYPARILIIVLS   59 (419)
T ss_dssp             HHHHHHHCHHHHHHHHHHTTTTTCCCCCCST----TCCC------------------------CHHHHSHHHHHHHHHHH
T ss_pred             HHHHHHhhhhhccHHHHHHHHHHccCCCCcc----ccCC------------------------CCCCcchHHHHHHHHHH
Confidence            5678999998888999999988665  2222    0011                        01123599999999999


Q ss_pred             hhhhcCChHHHHHHHHHHHHHHHHHHHhhc-CC-cccchhHHHhHHHHHHHH--hhhcccccccccchhhhhhhhccccc
Q psy10329        304 HTDYINDEEKVRCLLSAIILNVKRVVKKRY-ED-LDSTILWLTNLLRLLNLL--KQYSGEKAFQTDNTEVQNAQCLANFD  379 (606)
Q Consensus       304 ~ad~~~d~~~l~~LL~~ii~~Ik~vv~~~~-~D-l~~lafWLSN~~eLL~fL--kq~s~~~~f~~~nt~~Qn~~~L~~fd  379 (606)
                      ++|+.+...+.++||.+++++|+++++++. +| ++.++|||||+++|||||  ++++..     .+++  +++++.++|
T Consensus        60 ~~~~~~~~~~~~~ll~~ii~~I~~~v~~~~~~d~i~~lafWLSN~~~LL~~L~~k~~~~~-----~~~~--~~~~~~~~~  132 (419)
T 2f6h_X           60 EMWRFGLTKQSESFLAQVLTTIQKVVTQLKGNDLIPSGVFWLANVRELYSFVVFALNSIL-----TEET--FKNGMTDEE  132 (419)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHHHHHHHTCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HCCC------CCHHH
T ss_pred             HHHhhcchHHHHHHHHHHHHHHHHHHHhcCCCcchhhhhHHHHHHHHHHHHHHHhhhhhh-----ccCc--cccccchhh
Confidence            889988899999999999999999999986 44 688999999999999999  666531     1111  345566666


Q ss_pred             hHH-------HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCCcccCCCCCCC-CCCCCCC--CCcccHHHHHH
Q psy10329        380 FRE-------YRQVLSDTGVWIYQAVVRFMEEKINSIVIPAILEFESIPVMSSGKPSRL-GRSESVG--SSPGDLQALLM  449 (606)
Q Consensus       380 l~E-------~~~~L~dLi~~iy~~li~~i~k~L~~livpAiLe~esi~g~~~~k~~g~-kR~~s~~--~s~~~i~~IL~  449 (606)
                      +.+       |+++|++++.+||++++++++++|+|+++||||+++++||+.+.++.|+ +|.++.+  .++..|..+|+
T Consensus       133 ~~~y~~l~~~~~~~L~~l~~~iy~~li~~l~k~L~p~l~paIl~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~Il~~L~  212 (419)
T 2f6h_X          133 YKEYVSLVTELKDDFEALSYNIYNIWLKKLQKQLQKKAINAVVISESLPGFSAGETSGFLNKIFANTEEYTMDDILTFFN  212 (419)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSSTTTTC---------------CCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccccccccccccccccCCCccCHHHHHHHHH
Confidence            544       4899999999999999999999999999999999999999987655565 5544332  23567777799


Q ss_pred             HHHHHHHhcCCCHHHHHHHHHHHHHhhhHHHHHHHhhcCcccccchhhHHHhchhHHHHHHHhCCCCcchHHhhchhHHH
Q psy10329        450 SFYKLLVLHGIDMEIINQVFKQLYYYIGASSLNNLLLRKELCHWTRGMQIRYNLSHLEQFTRDNKMADGEINEQLSPLIQ  529 (606)
Q Consensus       450 ~~~~lL~~~~V~p~Li~QlFsQLF~fIna~lFN~LLlrk~~cswskG~QIR~NLS~LEeW~r~~gL~~~~a~~~L~pL~Q  529 (606)
                      +++++|+.|+|||.++.|+|+|+||||||++||+||+|++||+|++|+||||||+.||+||+++|+  +.|+.+|+|++|
T Consensus       213 ~~~~~L~~~~V~~~l~~Q~fsQlf~~In~~lFN~LL~r~~~cs~s~G~qIr~nls~Le~W~~~~~l--~~a~~~L~~l~Q  290 (419)
T 2f6h_X          213 SIYWCMKSFHIENEVFHAVVTTLLNYVDAICFNELIMKRNFLSWKRGLQLNYNVTRLEEWCKTHGL--TDGTECLQHLIQ  290 (419)
T ss_dssp             HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTC--TTHHHHTHHHHH
T ss_pred             HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhccCcccchhhHHHHHhhHHHHHHHHHHcCC--hhHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999999999999999999  568889999999


Q ss_pred             HHhhhhccC-chhhHHHHHhhcccCCHHHHHHHHhcCCCC----CCCchHHhhhhhhhhccc
Q psy10329        530 ASQLLQARK-TQEDVNTVCEMCNKMSTNQLESLENELNRA----RTENADLRHVMLKENKMN  586 (606)
Q Consensus       530 AaqLLQ~~K-T~~D~~si~~~C~~Ln~~QL~kIL~~Y~p~----rV~~~fI~~v~~~~~~~~  586 (606)
                      |++|||++| +.+|+++++++|++|||+||+|||++|+|+    +||++||..+.....+++
T Consensus       291 a~~lLq~~k~~~~d~~~i~~~C~~Ln~~Ql~~il~~Y~~d~~e~~v~~~~i~~v~~~~~~~~  352 (419)
T 2f6h_X          291 TAKLLQVRKYTIEDIDILRGICYSLTPAQLQKLISQYQVADYESPIPQEILRYVADIVKKEA  352 (419)
T ss_dssp             HHHHTTSCCSSHHHHHHHHHHTTTSCHHHHHHHHHHCCCCTTSCCCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHhhCCCchhhHHHHHHHhhcCCHHHHHHHHHhCCCccCCCCCCHHHHHHHHHHHhccc
Confidence            999999999 899999999999999999999999999999    899999998876655543
>3mmi_A Myosin-4; globular tail, dilute domain, motor protein; 2.30A {Saccharomyces cerevisiae} Back     alignment and structure
>3mmi_A Myosin-4; globular tail, dilute domain, motor protein; 2.30A {Saccharomyces cerevisiae} Back     alignment and structure
>2f6h_X Myosin-2, type V myosin; mysoin V, cargo binding, cargo transport, vacuole binding, secreatory vescIle binding, structural protein; 2.25A {Saccharomyces cerevisiae} Back     alignment and structure
>2a2f_X Exocyst complex component SEC15; all helical structure, protein transport; 2.50A {Drosophila melanogaster} Back     alignment and structure
>2fji_1 Exocyst complex component SEC6; exocytosis, tandem helical bundles, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00