Psyllid ID: psy10453


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180----
MFGSLMRFVDGDEDDILGAPAEAREFIEVASDVMRERQFDLQGWEITGDPETEKPTSLLGLLWNKVEDTLSVSIESLKEMQYQKVYQATSSTRSAPGGIRETKKAVCDSRTGVKKLAIGHAIGDKEHIIEREQNLRSGEQEERQDFINLDEGIDNEESEAFNQEWRQKAREAQLLQHSYTYMVY
ccccccccccccccccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccEEEEEEcccccccccEEEEEccEEcccccEEEcHHcccccccccEEEEEccccccccEEEEEEcccccccHHHHHHccccccccccHHHHHHHHHHHHHHHHHcccccccccccc
cccHHHHHcccccccccccccccccHHHHHcHHHHHHHHHHcccccccccccccccccEEEEEccccccccEEEcccccccccEEEEEcccccccccccHHHHHHcccccccHHEEEEccccccccEEEEEEcccccccHHHHHHHEcccccccHHHHHHHHHHHHHHHHHccccccccccccc
mfgslmrfvdgdeddilgapAEAREFIEVASDVMRERQfdlqgweitgdpetekptslLGLLWNKVEDTLSVSIESLKEMQYQKVYQatsstrsapggiretkkaVCDSRTGVKKLAIGHAIGDKEHIIEREQNLRSGEQEERQdfinldegidneesEAFNQEWRQKAREAQLLQHSYTYMVY
mfgslmrfvdgdeddilgAPAEAREFIEVASDVMRERQFDLQgweitgdpetekPTSLLGLLWNKVEDTLSVSIESLKEMQYQKVYQatsstrsapggiretkkavcdsrtgvkklaighaigdkehIIEREqnlrsgeqeeRQDFINLDEGIDNEESEAFNQEWRQKAREAqllqhsytymvy
MFGSLMRFVDGDEDDILGAPAEAREFIEVASDVMRERQFDLQGWEITGDPETEKPTSLLGLLWNKVEDTLSVSIESLKEMQYQKVYQATSSTRSAPGGIRETKKAVCDSRTGVKKLAIGHAIGDKEHIIEREQNLRSGEQEERQDFINLDEGIDNEESEAFNQEWRQKAREAQLLQHSYTYMVY
***************ILG***EAREFIEVASDVMRERQFDLQGWEITG*******TSLLGLLWNKVEDTLSVSIESLKEMQYQKV********************VCDSRTGVKKLAIGHAIGDK***********************************************************
MFG******D**********************************************************************************************************AIGHAIGDKEHI****************DFINLDEGIDNEESEAFNQ*********************
MFGSLMRFVDGDEDDILGAPAEAREFIEVASDVMRERQFDLQGWEITGDPETEKPTSLLGLLWNKVEDTLSVSIESLKEMQYQK*************************RTGVKKLAIGHAIGDKEHIIEREQNLRSGEQEERQDFINLDEGIDNEESEAFNQEWRQKAREAQLLQHSYTYMVY
*FGSLMRFVDGDEDDILGAPAEAREFIEVASDV***RQFD**GWEITGDPETEKPTSLLGLLWNKVEDTLSVSIESLKEMQYQKVYQATSS**************VCDSRTGVKKLAIGHAIGDKEHIIEREQN*RSGEQEERQDFINLDEGIDNEESEAFNQEWRQKAREAQLLQHSY****Y
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MFGSLMRFVDGDEDDILGAPAEAREFIEVASDVMRERQFDLQGWEITGDPETEKPTSLLGLLWNKVEDTLSVSIESLKEMQYQKVYQATSSTRSAPGGIRETKKAVCDSRTGVKKLAIGHAIGDKEHIIEREQNLRSGEQEERQDFINLDEGIDNEESEAFNQEWRQKAREAQLLQHSYTYMVY
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query184 2.2.26 [Sep-21-2011]
Q9NKV0 376 Myeloid leukemia factor O yes N/A 0.445 0.218 0.581 1e-24
Q99KX1247 Myeloid leukemia factor 2 yes N/A 0.440 0.327 0.564 1e-21
Q15773248 Myeloid leukemia factor 2 yes N/A 0.440 0.326 0.564 1e-21
Q5R4T3268 Myeloid leukemia factor 1 no N/A 0.423 0.291 0.475 7e-18
P58340268 Myeloid leukemia factor 1 no N/A 0.423 0.291 0.475 8e-18
Q32KY3270 Myeloid leukemia factor 1 no N/A 0.423 0.288 0.451 6e-17
Q9QWV4267 Myeloid leukemia factor 1 no N/A 0.423 0.292 0.439 1e-16
>sp|Q9NKV0|MLF_DROME Myeloid leukemia factor OS=Drosophila melanogaster GN=Mlf PE=1 SV=2 Back     alignment and function desciption
 Score =  112 bits (281), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 50/86 (58%), Positives = 73/86 (84%), Gaps = 4/86 (4%)

Query: 84  KVYQATSSTRSAPGGIRETKKAVCDSRTGVKKLAIGHAIGDKEHIIEREQNLRSGEQEER 143
           ++YQA++ST++ PGG+RET++ V DSRTGVKK+AIGH IG++ HIIE+EQ++RSG+ EER
Sbjct: 119 QIYQASTSTKTGPGGVRETRRTVQDSRTGVKKMAIGHHIGERAHIIEKEQDMRSGQLEER 178

Query: 144 QDFINLDEGIDNEESEAFNQEWRQKA 169
           Q+FINL+EG    E+E F++E+  +A
Sbjct: 179 QEFINLEEG----EAEQFDREFTSRA 200





Drosophila melanogaster (taxid: 7227)
>sp|Q99KX1|MLF2_MOUSE Myeloid leukemia factor 2 OS=Mus musculus GN=Mlf2 PE=1 SV=1 Back     alignment and function description
>sp|Q15773|MLF2_HUMAN Myeloid leukemia factor 2 OS=Homo sapiens GN=MLF2 PE=1 SV=1 Back     alignment and function description
>sp|Q5R4T3|MLF1_PONAB Myeloid leukemia factor 1 OS=Pongo abelii GN=MLF1 PE=2 SV=1 Back     alignment and function description
>sp|P58340|MLF1_HUMAN Myeloid leukemia factor 1 OS=Homo sapiens GN=MLF1 PE=1 SV=1 Back     alignment and function description
>sp|Q32KY3|MLF1_BOVIN Myeloid leukemia factor 1 OS=Bos taurus GN=MLF1 PE=2 SV=1 Back     alignment and function description
>sp|Q9QWV4|MLF1_MOUSE Myeloid leukemia factor 1 OS=Mus musculus GN=Mlf1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query184
383848705 305 PREDICTED: myeloid leukemia factor-like 0.902 0.544 0.422 2e-29
170041119 312 myeloid leukemia factor [Culex quinquefa 0.635 0.375 0.536 1e-27
350406838272 PREDICTED: myeloid leukemia factor-like 0.451 0.305 0.678 2e-27
340721242 304 PREDICTED: myeloid leukemia factor-like 0.451 0.273 0.678 2e-27
242013859181 Myeloid leukemia factor, putative [Pedic 0.461 0.469 0.651 3e-27
193620257253 PREDICTED: myeloid leukemia factor-like 0.516 0.375 0.584 4e-27
328787073258 PREDICTED: myeloid leukemia factor [Apis 0.918 0.655 0.385 2e-26
312381109176 hypothetical protein AND_06639 [Anophele 0.478 0.5 0.641 4e-26
380022269248 PREDICTED: myeloid leukemia factor-like, 0.896 0.665 0.387 4e-26
189239851279 PREDICTED: similar to myeloid leukemia f 0.451 0.297 0.643 6e-26
>gi|383848705|ref|XP_003699988.1| PREDICTED: myeloid leukemia factor-like [Megachile rotundata] Back     alignment and taxonomy information
 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/199 (42%), Positives = 108/199 (54%), Gaps = 33/199 (16%)

Query: 1   MFGSLMRFVDGDEDDILGAPAEA-REFIEVASDVM------------------RERQFDL 41
           +FGSLM   D D+D I G+  ++ R+   + +D                    R RQ DL
Sbjct: 3   LFGSLM--GDLDDDPIFGSHMQSMRQMYSLFNDPFGMMGHPCHNAIADGNHRSRNRQNDL 60

Query: 42  QGWEITGDP-ETEKPTSLLGLLWNKVEDTLSVSIESLKEMQY-------QKVYQATSSTR 93
           Q       P  +    +L G   N   +    S  S   M          +VYQ T ST 
Sbjct: 61  QMMPFVFPPMPSFNMVNLFGDFDNMASNGNCHSFTSRSVMTMASGPDGRPQVYQETMSTT 120

Query: 94  SAPGGIRETKKAVCDSRTGVKKLAIGHAIGDKEHIIEREQNLRSGEQEERQDFINLDEGI 153
           +APGG++ETKK VCDSRTGVKK+AIGH IG++ HI+EREQN+ SGEQEERQ+FINLDE  
Sbjct: 121 TAPGGVKETKKTVCDSRTGVKKMAIGHHIGERAHILEREQNVHSGEQEERQEFINLDE-- 178

Query: 154 DNEESEAFNQEWRQKAREA 172
             EE+E+FN EW  + R  
Sbjct: 179 --EEAESFNNEWETRTRRG 195




Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170041119|ref|XP_001848322.1| myeloid leukemia factor [Culex quinquefasciatus] gi|167864687|gb|EDS28070.1| myeloid leukemia factor [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|350406838|ref|XP_003487900.1| PREDICTED: myeloid leukemia factor-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|340721242|ref|XP_003399033.1| PREDICTED: myeloid leukemia factor-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|242013859|ref|XP_002427618.1| Myeloid leukemia factor, putative [Pediculus humanus corporis] gi|212512033|gb|EEB14880.1| Myeloid leukemia factor, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|193620257|ref|XP_001952446.1| PREDICTED: myeloid leukemia factor-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|328787073|ref|XP_393366.4| PREDICTED: myeloid leukemia factor [Apis mellifera] Back     alignment and taxonomy information
>gi|312381109|gb|EFR26928.1| hypothetical protein AND_06639 [Anopheles darlingi] Back     alignment and taxonomy information
>gi|380022269|ref|XP_003694973.1| PREDICTED: myeloid leukemia factor-like, partial [Apis florea] Back     alignment and taxonomy information
>gi|189239851|ref|XP_973705.2| PREDICTED: similar to myeloid leukemia factor [Tribolium castaneum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query184
FB|FBgn0034051 376 Mlf "Myelodysplasia/myeloid le 0.489 0.239 0.557 1.1e-23
UNIPROTKB|F1MYV8247 MLF2 "Uncharacterized protein" 0.440 0.327 0.564 1.5e-21
UNIPROTKB|E2REG7247 MLF2 "Uncharacterized protein" 0.440 0.327 0.564 1.5e-21
UNIPROTKB|Q15773248 MLF2 "Myeloid leukemia factor 0.440 0.326 0.564 1.5e-21
MGI|MGI:1353554247 Mlf2 "myeloid leukemia factor 0.440 0.327 0.564 1.5e-21
RGD|1306294247 Mlf2 "myeloid leukemia factor 0.440 0.327 0.564 1.5e-21
UNIPROTKB|F1NGJ9242 MLF2 "Uncharacterized protein" 0.440 0.334 0.529 1.7e-20
ZFIN|ZDB-GENE-050913-67250 mlf2 "myeloid leukemia factor 0.440 0.324 0.505 3.5e-20
UNIPROTKB|F1NNT8214 F1NNT8 "Uncharacterized protei 0.440 0.378 0.470 5.7e-20
UNIPROTKB|C9JNE5191 MLF1 "Myeloid leukemia factor 0.494 0.476 0.421 1.7e-18
FB|FBgn0034051 Mlf "Myelodysplasia/myeloid leukemia factor" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
 Identities = 53/95 (55%), Positives = 77/95 (81%)

Query:    84 KVYQATSSTRSAPGGIRETKKAVCDSRTGVKKLAIGHAIGDKEHIIEREQNLRSGEQEER 143
             ++YQA++ST++ PGG+RET++ V DSRTGVKK+AIGH IG++ HIIE+EQ++RSG+ EER
Sbjct:   119 QIYQASTSTKTGPGGVRETRRTVQDSRTGVKKMAIGHHIGERAHIIEKEQDMRSGQLEER 178

Query:   144 QDFINLDEGIDNEESEAFNQEWRQKA-REAQLLQH 177
             Q+FINL+EG    E+E F++E+  +A R A   +H
Sbjct:   179 QEFINLEEG----EAEQFDREFTSRASRGAVQSRH 209




GO:0005737 "cytoplasm" evidence=NAS;IDA
GO:2000495 "regulation of cell proliferation involved in compound eye morphogenesis" evidence=IEP
GO:0005705 "polytene chromosome interband" evidence=IDA
GO:0005634 "nucleus" evidence=IDA
GO:0048471 "perinuclear region of cytoplasm" evidence=IDA
GO:0006355 "regulation of transcription, DNA-dependent" evidence=IMP
GO:0050821 "protein stabilization" evidence=IMP
UNIPROTKB|F1MYV8 MLF2 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E2REG7 MLF2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q15773 MLF2 "Myeloid leukemia factor 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:1353554 Mlf2 "myeloid leukemia factor 2" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1306294 Mlf2 "myeloid leukemia factor 2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1NGJ9 MLF2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-050913-67 mlf2 "myeloid leukemia factor 2" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1NNT8 F1NNT8 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|C9JNE5 MLF1 "Myeloid leukemia factor 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q15773MLF2_HUMANNo assigned EC number0.56470.44020.3266yesN/A
Q9NKV0MLF_DROMENo assigned EC number0.58130.44560.2180yesN/A
Q99KX1MLF2_MOUSENo assigned EC number0.56470.44020.3279yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query184
pfam10248177 pfam10248, Mlf1IP, Myelodysplasia-myeloid leukemia 2e-41
>gnl|CDD|220651 pfam10248, Mlf1IP, Myelodysplasia-myeloid leukemia factor 1-interacting protein Back     alignment and domain information
 Score =  137 bits (346), Expect = 2e-41
 Identities = 56/86 (65%), Positives = 71/86 (82%), Gaps = 4/86 (4%)

Query: 84  KVYQATSSTRSAPGGIRETKKAVCDSRTGVKKLAIGHAIGDKEHIIEREQNLRSGEQEER 143
           KVYQATS TR+APGGIRET+K V DS +G++K+AIGH IGD+ HIIER QN R+G+QEER
Sbjct: 96  KVYQATSQTRTAPGGIRETRKTVRDSESGLEKMAIGHHIGDRAHIIERSQNRRTGDQEER 155

Query: 144 QDFINLDEGIDNEESEAFNQEWRQKA 169
           QDFINLDE     E+ AF++EW+++ 
Sbjct: 156 QDFINLDES----EAAAFDEEWQREV 177


This entry is the conserved central region of a group of proteins that are putative transcriptional repressors. The structure contains a putative 14-3-3 binding motif involved in the subcellular localisation of various regulatory molecules, and it may be that interaction with the transcription factor DREF could be regulated through this motif. DREF regulates proliferation-related genes in Drosophila. Mlf1IP is expressed in both the nuclei and the cytoplasm and thus may have multi-functions. Length = 177

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 184
PF10248176 Mlf1IP: Myelodysplasia-myeloid leukemia factor 1-i 100.0
KOG4049|consensus248 100.0
>PF10248 Mlf1IP: Myelodysplasia-myeloid leukemia factor 1-interacting protein; InterPro: IPR019376 Myeloid leukemia factor is involved in lineage commitment of primary hemopoietic progenitors by restricting erythroid formation and enhancing myeloid formation [] Back     alignment and domain information
Probab=100.00  E-value=1.2e-47  Score=316.56  Aligned_cols=108  Identities=48%  Similarity=0.804  Sum_probs=99.4

Q ss_pred             hhhhhhhcCCCCCeeEeeeeeeee-----eCceEEEEeeeeEecCCCeeEEEEeeecCcccceeeeeeccCCCceeeEEE
Q psy10453         57 SLLGLLWNKVEDTLSVSIESLKEM-----QYQKVYQATSSTRSAPGGIRETKKAVCDSRTGVKKLAIGHAIGDKEHIIER  131 (184)
Q Consensus        57 sl~~~~~n~~~~~~sfsSSSv~ty-----g~p~vyqassstR~~pgGIkETrr~v~DS~TG~ekmaIgh~IGDR~HiIeR  131 (184)
                      .+|..+.+ .|++++|||||||||     |+|+|||+||+||+|||||||||++|+||+||++||+||||||||+|+|+|
T Consensus        64 ~~~~~~~~-~p~~~sfsSSsv~sys~~~~g~p~vyq~Ss~tr~~pggi~Et~~~~~DS~sG~ekm~ig~~Igdr~H~v~r  142 (176)
T PF10248_consen   64 RNFNQMSP-DPNSHSFSSSSVMSYSSGPDGPPKVYQASSSTRTAPGGIKETRRTVRDSDSGLEKMAIGHHIGDRGHVVER  142 (176)
T ss_pred             HHHhcccc-CCCCceeeeeeEEEeccCCCCCCeEEEEeeEEEecCCCchhhhhhhhcccchhhhhhccccccCceeEEEE
Confidence            33444433 369999999999999     459999999999999999999999999999999999999999999999999


Q ss_pred             eecCCCcchhhhhhccccCCCCCchhhHHhHHHHHHHH
Q psy10453        132 EQNLRSGEQEERQDFINLDEGIDNEESEAFNQEWRQKA  169 (184)
Q Consensus       132 ~rN~~tG~~Ee~Q~fiNLdE~~~~~Ea~~FD~EW~~~a  169 (184)
                      ++|.+||++|++|+||||+|    +||++||+||++++
T Consensus       143 ~~n~~tG~~e~~q~~~NL~E----~ea~~Fd~eW~~~~  176 (176)
T PF10248_consen  143 KRNRKTGDVEERQDFINLDE----DEAEDFDEEWQRRV  176 (176)
T ss_pred             eecCCCCcchhhhhhcCCCh----hHHHHHhHHHhhcC
Confidence            99989999999999999999    99999999999874



>KOG4049|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00