Psyllid ID: psy10483
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 287 | ||||||
| 288869502 | 248 | cuticular protein analogous to peritroph | 0.818 | 0.947 | 0.669 | 8e-89 | |
| 270297188 | 236 | cuticular protein analogous to peritroph | 0.797 | 0.970 | 0.607 | 5e-79 | |
| 357615826 | 239 | cuticular protein analogous to peritroph | 0.801 | 0.962 | 0.611 | 4e-77 | |
| 389608649 | 239 | obstructor-A [Papilio xuthus] | 0.770 | 0.924 | 0.616 | 4e-75 | |
| 383860666 | 231 | PREDICTED: uncharacterized protein LOC10 | 0.773 | 0.961 | 0.585 | 1e-72 | |
| 350405831 | 230 | PREDICTED: probable chitinase 3-like [Bo | 0.787 | 0.982 | 0.571 | 1e-71 | |
| 340711122 | 230 | PREDICTED: probable chitinase 3-like [Bo | 0.787 | 0.982 | 0.571 | 3e-71 | |
| 307212772 | 236 | Peritrophin-44 [Harpegnathos saltator] | 0.773 | 0.940 | 0.585 | 3e-71 | |
| 332027354 | 236 | Peritrophin-44 [Acromyrmex echinatior] | 0.822 | 1.0 | 0.542 | 1e-70 | |
| 380013948 | 229 | PREDICTED: uncharacterized protein LOC10 | 0.780 | 0.978 | 0.566 | 2e-70 |
| >gi|288869502|ref|NP_001165858.1| cuticular protein analogous to peritrophins 3-A2 precursor [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 332 bits (852), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 162/242 (66%), Positives = 194/242 (80%), Gaps = 7/242 (2%)
Query: 44 ADFPTFLNLVSAGLAQSQVAFKCPVDKLKNSYYPDSIQCDLYYHCS-DGQLVEEKLCPDG 102
A F+ L ++ F+CP K +Y D IQCDLYYHCS DG+L E KLCPDG
Sbjct: 11 AALVLFVGLALGQQQNNRGEFQCP---QKPGFYADQIQCDLYYHCSVDGELTE-KLCPDG 66
Query: 103 LLFDDSNPAHERCDTNVNVECGERTELQEPKPTKGCPRANGFFRHYDEKVCDKFVNCVDG 162
LLFDDS+P+HE+CDT+VNV+CG+RT QEPKP+KGCPRANG++RH+DE VCDKFVNCVDG
Sbjct: 67 LLFDDSSPSHEKCDTSVNVDCGQRTVQQEPKPSKGCPRANGYYRHWDEGVCDKFVNCVDG 126
Query: 163 VPNELPCPPGLIYDDSVSSCAWPSENTRKDCTVTKKDTLTDGFSCPDGEVMGPNGRPLPH 222
NE+PCPPGL+YDDS SSCAW +++ R+ CT TK+D LTDGF+CPDG+V+GPNGR LPH
Sbjct: 127 NANEMPCPPGLVYDDSTSSCAWATDSKRQ-CTTTKRDALTDGFTCPDGDVVGPNGRILPH 185
Query: 223 PTFPHPEDCQKFYICRNGVQAQYGSCPAGSVYNEESFKCDEPENVPGCENWF-GEDNSTG 281
PTF HP+DCQKFYICRNGV QYGSC AG+VYN+ SFKCD+PENVPGCEN++ ED G
Sbjct: 186 PTFAHPDDCQKFYICRNGVIPQYGSCSAGTVYNDVSFKCDDPENVPGCENYYENEDEKKG 245
Query: 282 DK 283
K
Sbjct: 246 GK 247
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|270297188|ref|NP_001161909.1| cuticular protein analogous to peritrophins 3-A2 precursor [Tribolium castaneum] gi|268309020|gb|ACY95476.1| cuticular protein analogous to peritrophins 3-A2 [Tribolium castaneum] gi|270000883|gb|EEZ97330.1| hypothetical protein TcasGA2_TC011141 [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
| >gi|357615826|gb|EHJ69853.1| cuticular protein analogous to peritrophins 3-A2 [Danaus plexippus] | Back alignment and taxonomy information |
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| >gi|389608649|dbj|BAM17934.1| obstructor-A [Papilio xuthus] | Back alignment and taxonomy information |
|---|
| >gi|383860666|ref|XP_003705810.1| PREDICTED: uncharacterized protein LOC100879824 [Megachile rotundata] | Back alignment and taxonomy information |
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| >gi|350405831|ref|XP_003487565.1| PREDICTED: probable chitinase 3-like [Bombus impatiens] | Back alignment and taxonomy information |
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| >gi|340711122|ref|XP_003394129.1| PREDICTED: probable chitinase 3-like [Bombus terrestris] | Back alignment and taxonomy information |
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| >gi|307212772|gb|EFN88443.1| Peritrophin-44 [Harpegnathos saltator] | Back alignment and taxonomy information |
|---|
| >gi|332027354|gb|EGI67438.1| Peritrophin-44 [Acromyrmex echinatior] | Back alignment and taxonomy information |
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| >gi|380013948|ref|XP_003691006.1| PREDICTED: uncharacterized protein LOC100866018 [Apis florea] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 287 | ||||||
| FB|FBgn0031097 | 237 | obst-A "obstructor-A" [Drosoph | 0.759 | 0.919 | 0.449 | 3e-53 | |
| FB|FBgn0027600 | 337 | obst-B "obstructor-B" [Drosoph | 0.717 | 0.611 | 0.4 | 1.3e-43 | |
| FB|FBgn0026077 | 258 | Gasp "Gasp" [Drosophila melano | 0.735 | 0.817 | 0.410 | 1.4e-41 | |
| FB|FBgn0031737 | 249 | obst-E "obstructor-E" [Drosoph | 0.679 | 0.783 | 0.328 | 3.6e-25 | |
| FB|FBgn0022770 | 230 | Peritrophin-A "Peritrophin A" | 0.728 | 0.908 | 0.300 | 4.8e-23 | |
| WB|WBGene00019833 | 431 | R02F2.4 [Caenorhabditis elegan | 0.592 | 0.394 | 0.269 | 1.4e-10 | |
| FB|FBgn0023479 | 2786 | Tequila "Tequila" [Drosophila | 0.602 | 0.062 | 0.277 | 8.9e-09 | |
| FB|FBgn0038492 | 2112 | Mur89F "Mucin related 89F" [Dr | 0.205 | 0.027 | 0.403 | 1.8e-08 | |
| FB|FBgn0036229 | 796 | CG7248 [Drosophila melanogaste | 0.700 | 0.252 | 0.271 | 2.2e-08 | |
| FB|FBgn0036363 | 297 | CG10140 [Drosophila melanogast | 0.571 | 0.552 | 0.295 | 1.9e-07 |
| FB|FBgn0031097 obst-A "obstructor-A" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
Identities = 102/227 (44%), Positives = 134/227 (59%)
Query: 60 SQVAFKCPVDKLKNSYYPDSIQCDLYYHCSDGQLVEEKLCPDGLLFDDSNPAHERCDTNV 119
S F+CP N + D +QCD +Y C DG + + KLCPDGL+FD N +CD
Sbjct: 19 SAANFECPKP---NGQFADEVQCDKFYVCDDG-VAKAKLCPDGLVFDPLNRKFNKCDQPF 74
Query: 120 NVECGERTELQEPKPTKGCPRANGFFRHYDEKVCDKFVNCVDGVPNELPCPPGLIYDDSV 179
NV+C +RTELQEPK +K CPR NGFF H D VC+ F NC++G E C GL +D+
Sbjct: 75 NVDCEDRTELQEPKSSKYCPRKNGFFAHPDPAVCNIFYNCIEGDALETKCTVGLHFDEYS 134
Query: 180 SSCAWPSENTRKDCTVTKKDTLTDGFSCP-DGEVMGPNGRPLPHPTFPHPEDCQKFYICR 238
+C WP R+ C ++ + T GF CP D G+ + HP +PHP DCQKFY+C
Sbjct: 135 GTCVWPDTAKREGCNPEQRTSET-GFVCPKDQPKTDDRGQVVTHPKYPHPTDCQKFYVCL 193
Query: 239 NGVQAQYGSCPAGSVYNEESFKCDEPENVPGCENWFGEDNSTGDKKN 285
NG + C G VYN+ + CD PENVPGCE+W+ + DKK+
Sbjct: 194 NGEDPRDLGCQLGEVYNDATEMCDAPENVPGCEDWYKD---VDDKKD 237
|
|
| FB|FBgn0027600 obst-B "obstructor-B" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
| FB|FBgn0026077 Gasp "Gasp" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| FB|FBgn0031737 obst-E "obstructor-E" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| FB|FBgn0022770 Peritrophin-A "Peritrophin A" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| WB|WBGene00019833 R02F2.4 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
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| FB|FBgn0023479 Tequila "Tequila" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| FB|FBgn0038492 Mur89F "Mucin related 89F" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| FB|FBgn0036229 CG7248 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| FB|FBgn0036363 CG10140 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 287 | |||
| pfam01607 | 53 | pfam01607, CBM_14, Chitin binding Peritrophin-A do | 1e-10 | |
| smart00494 | 49 | smart00494, ChtBD2, Chitin-binding domain type 2 | 3e-07 | |
| smart00494 | 49 | smart00494, ChtBD2, Chitin-binding domain type 2 | 1e-06 | |
| pfam01607 | 53 | pfam01607, CBM_14, Chitin binding Peritrophin-A do | 4e-06 | |
| pfam01607 | 53 | pfam01607, CBM_14, Chitin binding Peritrophin-A do | 4e-06 | |
| smart00494 | 49 | smart00494, ChtBD2, Chitin-binding domain type 2 | 3e-04 |
| >gnl|CDD|216601 pfam01607, CBM_14, Chitin binding Peritrophin-A domain | Back alignment and domain information |
|---|
Score = 55.5 bits (134), Expect = 1e-10
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 224 TFPHPEDCQKFYICRNGVQAQYGSCPAGSVYNEESFKCDEPENVPGC 270
+P P DC K+Y C NG +A +CPAG V++ CD P+NV C
Sbjct: 8 LYPDPGDCSKYYQCSNG-KAVVFTCPAGLVFDPALGTCDYPDNVVDC 53
|
This domain is called the Peritrophin-A domain and is found in chitin binding proteins particularly peritrophic matrix proteins of insects and animal chitinases. Copies of the domain are also found in some baculoviruses. Relevant references that describe proteins with this domain include. It is an extracellular domain that contains six conserved cysteines that probably form three disulphide bridges. Chitin binding has been demonstrated for a protein containing only two of these domains. Length = 53 |
| >gnl|CDD|214696 smart00494, ChtBD2, Chitin-binding domain type 2 | Back alignment and domain information |
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| >gnl|CDD|214696 smart00494, ChtBD2, Chitin-binding domain type 2 | Back alignment and domain information |
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| >gnl|CDD|216601 pfam01607, CBM_14, Chitin binding Peritrophin-A domain | Back alignment and domain information |
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| >gnl|CDD|216601 pfam01607, CBM_14, Chitin binding Peritrophin-A domain | Back alignment and domain information |
|---|
| >gnl|CDD|214696 smart00494, ChtBD2, Chitin-binding domain type 2 | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 287 | |||
| PF01607 | 53 | CBM_14: Chitin binding Peritrophin-A domain; Inter | 99.16 | |
| smart00494 | 56 | ChtBD2 Chitin-binding domain type 2. | 99.02 | |
| PF01607 | 53 | CBM_14: Chitin binding Peritrophin-A domain; Inter | 99.0 | |
| smart00494 | 56 | ChtBD2 Chitin-binding domain type 2. | 98.89 |
| >PF01607 CBM_14: Chitin binding Peritrophin-A domain; InterPro: IPR002557 This entry represents a chitin binding domain [] | Back alignment and domain information |
|---|
Probab=99.16 E-value=2.8e-11 Score=80.70 Aligned_cols=49 Identities=43% Similarity=0.981 Sum_probs=37.5
Q ss_pred CCCccccCCCCCCceEEecCCccCceeeCCCCCeecCCCCCcCccccCcc-ccC
Q psy10483 71 LKNSYYPDSIQCDLYYHCSDGQLVEEKLCPDGLLFDDSNPAHERCDTNVN-VEC 123 (287)
Q Consensus 71 ~~~G~~~~p~~C~~y~~C~~g~~~~~~~Cp~g~~Fd~~~~~~~~C~~~~~-~~C 123 (287)
..+|+++++.+|++||+|.+|.+ .+++||.|++||.. +++|+++.. +.|
T Consensus 4 ~~~~~~~~~~~C~~Y~~C~~g~~-~~~~C~~g~~fd~~---~~~C~~~~~~~~C 53 (53)
T PF01607_consen 4 RGDGFYPHPDDCRKYYQCVNGQA-VEQRCPEGLYFDPS---SQRCVPPSNVVQC 53 (53)
T ss_dssp -SSEEE--SS-SSEEEEEETTEE-EEEE-TTS-EE-TT---TSSEE-TTT-TT-
T ss_pred cCCeeEeCCCCCCEEEEeeCCcE-ECCCCcCCCEECcC---cCEEcCCccCCCC
Confidence 56889999999999999999999 99999999999999 999999887 555
|
It is found in (amongst others) the Peritrophin-A chitin binding proteins, particularly the peritrophic matrix proteins of insects and animal chitinases [, , ]. Copies of the domain are also found in some baculoviruses. It is an extracellular domain that contains six conserved cysteines that probably form three disulphide bridges. Chitin binding has been demonstrated for a protein containing only two of these domains [].; GO: 0008061 chitin binding, 0006030 chitin metabolic process, 0005576 extracellular region; PDB: 1DQC_A. |
| >smart00494 ChtBD2 Chitin-binding domain type 2 | Back alignment and domain information |
|---|
| >PF01607 CBM_14: Chitin binding Peritrophin-A domain; InterPro: IPR002557 This entry represents a chitin binding domain [] | Back alignment and domain information |
|---|
| >smart00494 ChtBD2 Chitin-binding domain type 2 | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 287 | |||
| 1dqc_A | 74 | Tachycitin; disulfide-rich, antimicrobial protein; | 2e-09 | |
| 1dqc_A | 74 | Tachycitin; disulfide-rich, antimicrobial protein; | 7e-08 | |
| 1dqc_A | 74 | Tachycitin; disulfide-rich, antimicrobial protein; | 1e-07 | |
| 1wb0_A | 445 | Chitinase 1, chitotriosidase 1; cyclopentapeptide | 2e-07 | |
| 1wb0_A | 445 | Chitinase 1, chitotriosidase 1; cyclopentapeptide | 1e-06 | |
| 1wb0_A | 445 | Chitinase 1, chitotriosidase 1; cyclopentapeptide | 2e-05 |
| >1dqc_A Tachycitin; disulfide-rich, antimicrobial protein; NMR {Tachypleus tridentatus} SCOP: g.31.1.1 Length = 74 | Back alignment and structure |
|---|
Score = 52.1 bits (125), Expect = 2e-09
Identities = 19/75 (25%), Positives = 26/75 (34%), Gaps = 8/75 (10%)
Query: 204 GFSCPDGEVMGPNGRPLPHPTFPHPEDCQKFYICRNGVQAQYGSCPAGSVYNEESFKCDE 263
F C +G + C FY C + A+ +CP G YN CD
Sbjct: 3 AFRCGRYSPCLDDG------PNVNLYSCCSFYNCHKCL-ARLENCPKGLHYNAYLKVCDW 55
Query: 264 PENVPGCENWFGEDN 278
P GC + E +
Sbjct: 56 PSKA-GCTSVNKECH 69
|
| >1dqc_A Tachycitin; disulfide-rich, antimicrobial protein; NMR {Tachypleus tridentatus} SCOP: g.31.1.1 Length = 74 | Back alignment and structure |
|---|
| >1dqc_A Tachycitin; disulfide-rich, antimicrobial protein; NMR {Tachypleus tridentatus} SCOP: g.31.1.1 Length = 74 | Back alignment and structure |
|---|
| >1wb0_A Chitinase 1, chitotriosidase 1; cyclopentapeptide inhibitors, chitinase inhibitors, carbohyd metabolism, chitin degradation, chitin-binding; HET: VR0 MEA; 1.65A {Homo sapiens} SCOP: c.1.8.5 d.26.3.1 PDB: 1waw_A* 1guv_A 1lg2_A 1lg1_A 1lq0_A 1hki_A* 1hkj_A* 1hkm_A* 1hkk_A* Length = 445 | Back alignment and structure |
|---|
| >1wb0_A Chitinase 1, chitotriosidase 1; cyclopentapeptide inhibitors, chitinase inhibitors, carbohyd metabolism, chitin degradation, chitin-binding; HET: VR0 MEA; 1.65A {Homo sapiens} SCOP: c.1.8.5 d.26.3.1 PDB: 1waw_A* 1guv_A 1lg2_A 1lg1_A 1lq0_A 1hki_A* 1hkj_A* 1hkm_A* 1hkk_A* Length = 445 | Back alignment and structure |
|---|
| >1wb0_A Chitinase 1, chitotriosidase 1; cyclopentapeptide inhibitors, chitinase inhibitors, carbohyd metabolism, chitin degradation, chitin-binding; HET: VR0 MEA; 1.65A {Homo sapiens} SCOP: c.1.8.5 d.26.3.1 PDB: 1waw_A* 1guv_A 1lg2_A 1lg1_A 1lq0_A 1hki_A* 1hkj_A* 1hkm_A* 1hkk_A* Length = 445 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 287 | |||
| 1dqc_A | 74 | Tachycitin; disulfide-rich, antimicrobial protein; | 99.3 | |
| 1dqc_A | 74 | Tachycitin; disulfide-rich, antimicrobial protein; | 99.19 | |
| 1wb0_A | 445 | Chitinase 1, chitotriosidase 1; cyclopentapeptide | 98.33 | |
| 1wb0_A | 445 | Chitinase 1, chitotriosidase 1; cyclopentapeptide | 98.21 |
| >1dqc_A Tachycitin; disulfide-rich, antimicrobial protein; NMR {Tachypleus tridentatus} SCOP: g.31.1.1 | Back alignment and structure |
|---|
Probab=99.30 E-value=1.9e-12 Score=91.86 Aligned_cols=56 Identities=20% Similarity=0.417 Sum_probs=52.3
Q ss_pred CCCCCCCCCCCccccCCCCCCceEEecCCccCceeeCCCCCeecCCCCCcCccccCccccCCCc
Q psy10483 63 AFKCPVDKLKNSYYPDSIQCDLYYHCSDGQLVEEKLCPDGLLFDDSNPAHERCDTNVNVECGER 126 (287)
Q Consensus 63 ~~~C~~~~~~~G~~~~p~~C~~y~~C~~g~~~~~~~Cp~g~~Fd~~~~~~~~C~~~~~~~C~~~ 126 (287)
...|+. +|+++||.+|++||+|.+|.+ .++.||.||+||+. ++.|+|++++.|...
T Consensus 9 ~~~C~~----~G~~~~p~dC~~fy~C~~G~~-~~~~Cp~Gl~Fn~~---~~~Cd~p~~v~C~~~ 64 (74)
T 1dqc_A 9 YSPCLD----DGPNVNLYSCCSFYNCHKCLA-RLENCPKGLHYNAY---LKVCDWPSKAGCTSV 64 (74)
T ss_dssp GCCSSS----SEEECCSSCSSEEEEEETTEE-EEEECTTSCEEETT---TTEEECTTTTTCCSS
T ss_pred CCcCCC----CCEeCCcccCcceeECCCCcE-EEeECcCCCEEChh---hCcCcCcccCCCCCC
Confidence 467987 899999999999999999999 99999999999999 999999999999765
|
| >1dqc_A Tachycitin; disulfide-rich, antimicrobial protein; NMR {Tachypleus tridentatus} SCOP: g.31.1.1 | Back alignment and structure |
|---|
| >1wb0_A Chitinase 1, chitotriosidase 1; cyclopentapeptide inhibitors, chitinase inhibitors, carbohyd metabolism, chitin degradation, chitin-binding; HET: VR0 MEA; 1.65A {Homo sapiens} SCOP: c.1.8.5 d.26.3.1 PDB: 1waw_A* 1guv_A 1lg2_A 1lg1_A 1lq0_A 1hki_A* 1hkj_A* 1hkm_A* 1hkk_A* | Back alignment and structure |
|---|
| >1wb0_A Chitinase 1, chitotriosidase 1; cyclopentapeptide inhibitors, chitinase inhibitors, carbohyd metabolism, chitin degradation, chitin-binding; HET: VR0 MEA; 1.65A {Homo sapiens} SCOP: c.1.8.5 d.26.3.1 PDB: 1waw_A* 1guv_A 1lg2_A 1lg1_A 1lq0_A 1hki_A* 1hkj_A* 1hkm_A* 1hkk_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 287 | ||||
| d1dqca_ | 73 | g.31.1.1 (A:) Tachycitin {Horseshoe crab (Tachyple | 3e-08 | |
| d1dqca_ | 73 | g.31.1.1 (A:) Tachycitin {Horseshoe crab (Tachyple | 2e-06 | |
| d1dqca_ | 73 | g.31.1.1 (A:) Tachycitin {Horseshoe crab (Tachyple | 1e-05 |
| >d1dqca_ g.31.1.1 (A:) Tachycitin {Horseshoe crab (Tachypleus tridentatus) [TaxId: 6853]} Length = 73 | Back information, alignment and structure |
|---|
class: Small proteins fold: Invertebrate chitin-binding proteins superfamily: Invertebrate chitin-binding proteins family: Tachycitin domain: Tachycitin species: Horseshoe crab (Tachypleus tridentatus) [TaxId: 6853]
Score = 47.6 bits (113), Expect = 3e-08
Identities = 15/49 (30%), Positives = 19/49 (38%), Gaps = 2/49 (4%)
Query: 224 TFPHPEDCQKFYICRNGVQAQYGSCPAGSVYNEESFKCDEPENVPGCEN 272
+ C FY C A+ +CP G YN CD P GC +
Sbjct: 17 PNVNLYSCCSFYNCHKC-LARLENCPKGLHYNAYLKVCDWPSKA-GCTS 63
|
| >d1dqca_ g.31.1.1 (A:) Tachycitin {Horseshoe crab (Tachypleus tridentatus) [TaxId: 6853]} Length = 73 | Back information, alignment and structure |
|---|
| >d1dqca_ g.31.1.1 (A:) Tachycitin {Horseshoe crab (Tachypleus tridentatus) [TaxId: 6853]} Length = 73 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 287 | |||
| d1dqca_ | 73 | Tachycitin {Horseshoe crab (Tachypleus tridentatus | 99.32 | |
| d1dqca_ | 73 | Tachycitin {Horseshoe crab (Tachypleus tridentatus | 99.29 | |
| d1hx2a_ | 60 | BSTI {Fire-bellied toad (Bombina bombina) [TaxId: | 81.33 |
| >d1dqca_ g.31.1.1 (A:) Tachycitin {Horseshoe crab (Tachypleus tridentatus) [TaxId: 6853]} | Back information, alignment and structure |
|---|
class: Small proteins fold: Invertebrate chitin-binding proteins superfamily: Invertebrate chitin-binding proteins family: Tachycitin domain: Tachycitin species: Horseshoe crab (Tachypleus tridentatus) [TaxId: 6853]
Probab=99.32 E-value=7.4e-13 Score=91.91 Aligned_cols=55 Identities=20% Similarity=0.458 Sum_probs=51.1
Q ss_pred CCCCCCCCCccccCCCCCCceEEecCCccCceeeCCCCCeecCCCCCcCccccCccccCCCcc
Q psy10483 65 KCPVDKLKNSYYPDSIQCDLYYHCSDGQLVEEKLCPDGLLFDDSNPAHERCDTNVNVECGERT 127 (287)
Q Consensus 65 ~C~~~~~~~G~~~~p~~C~~y~~C~~g~~~~~~~Cp~g~~Fd~~~~~~~~C~~~~~~~C~~~~ 127 (287)
.|.. +|++++|.+|++||+|.+|.+ ..+.||.||+||+. ++.|+|+++|.|....
T Consensus 11 ~C~~----dG~~~~p~dC~~yy~C~~g~~-~~~~Cp~Gl~Fn~~---~~~Cd~p~~v~C~~~~ 65 (73)
T d1dqca_ 11 PCLD----DGPNVNLYSCCSFYNCHKCLA-RLENCPKGLHYNAY---LKVCDWPSKAGCTSVN 65 (73)
T ss_dssp CSSS----SEEECCSSCSSEEEEEETTEE-EEEECTTSCEEETT---TTEEECTTTTTCCSSC
T ss_pred CCCC----CCccCCcccccEEEEeECCEE-EEEECCCCCEECCC---cCEECccccCCCCCCC
Confidence 4665 899999999999999999999 99999999999999 9999999999998763
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| >d1dqca_ g.31.1.1 (A:) Tachycitin {Horseshoe crab (Tachypleus tridentatus) [TaxId: 6853]} | Back information, alignment and structure |
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| >d1hx2a_ g.22.1.2 (A:) BSTI {Fire-bellied toad (Bombina bombina) [TaxId: 8345]} | Back information, alignment and structure |
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