Psyllid ID: psy10492

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------
Protein Sequence
MFSPGPARPPFRIPEFKWSYIHQRLLSDVLFSLETDIQEYLKKVNNSRPPFRIPEFKWSYIHQRLLSDVLFSLETDIQ
Secondary Structure (PSIPRED)
ccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEHHHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
ccccccccccEEccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHcccc
Coil and Loop (DISEMBL)
mfspgparppfripefkwsYIHQRLLSDVLFSLETDIQEYLKKvnnsrppfripefkwsYIHQRLLSDVLFSLETDIQ
Flexible Loop (DISEMBL)
mfspgparppfriPEFKWSYIHQRLLSDVLFSLETDIQEYLkkvnnsrppfrIPEFKWSYIHQRLLSDVLFSLETDIQ
Low Complexity Region (SEG)
MFSPGPARPPFRIPEFKWSYIHQRLLSDVLFSLETDIQEYLKKVNNSRPPFRIPEFKWSYIHQRLLSDVLFSLETDIQ
Disordered region (IsUnstruct)
**********FRIPEFKWSYIHQRLLSDVLFSLETDIQEYLKKVNNSRPPFRIPEFKWSYIHQRLLSDVLFSL*****
Disordered Region (DISOPRED)
**********FRIPEFKWSYIHQRLLSDVLFSLETDIQEYLKKVNNSRPPFRIPEFKWSYIHQRLLSDVLFSLET***
Disordered Region (DISEMBL)
MFSPGPARPPFRIPEFKWSYIHQRLLSDVLFSLETDIQEYLKKVNNSRPPFRIPEFKWSYIHQRLLSDVLFSLETDIQ
Disordered Region (DISPRO)
******ARPPFRIPEFKWSYIHQRLLSDVLFSLETDIQEYLKKVNNSRPPFRIPEFKWSYIHQRLLSDVLFSLETD**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MFSPGPARPPFRIPEFKWSYIHQRLLSDVLFSLETDIQEYLKKVNNSRPPFRIPEFKWSYIHQRLLSDVLFSLETDIQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	78	2.2.26 [Sep-21-2011]
Q9W4E2	3578	Neurobeachin OS=Drosophil	yes	N/A	0.487	0.010	0.973	3e-16
Q9DDD5	793	Neurobeachin (Fragment) O	yes	N/A	0.474	0.046	0.702	6e-10
Q8NFP9	2946	Neurobeachin OS=Homo sapi	yes	N/A	0.474	0.012	0.702	3e-09
Q9EPN1	2936	Neurobeachin OS=Mus muscu	yes	N/A	0.474	0.012	0.702	3e-09
Q9ESE1	2856	Lipopolysaccharide-respon	no	N/A	0.358	0.009	0.821	1e-07
P50851	2863	Lipopolysaccharide-respon	no	N/A	0.358	0.009	0.785	5e-07

>sp|Q9W4E2|NBEA_DROME Neurobeachin OS=Drosophila melanogaster GN=rg PE=1 SV=3

 Score = 83.6 bits (205), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 37/38 (97%), Positives = 37/38 (97%)

Query: 1    MFSPGPARPPFRIPEFKWSYIHQRLLSDVLFSLETDIQ 38
            MFSPGP RPPFRIPEFKWSYIHQRLLSDVLFSLETDIQ
Sbjct: 1632 MFSPGPTRPPFRIPEFKWSYIHQRLLSDVLFSLETDIQ 1669

Binds to type II regulatory subunits of protein kinase A and anchors/targets them to the membrane. May anchor the kinase to cytoskeletal and/or organelle-associated proteins. Required for correct retinal pattern formation and may function in cell fate determination through its interactions with the EGFR and Notch signaling pathways.
Drosophila melanogaster (taxid: 7227)

>sp|Q9DDD5|NBEA_CHICK Neurobeachin (Fragment) OS=Gallus gallus GN=NBEA PE=2 SV=1

 Score = 62.8 bits (151), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 26/37 (70%), Positives = 31/37 (83%)

Query: 2   FSPGPARPPFRIPEFKWSYIHQRLLSDVLFSLETDIQ 38
           FSPGP    FRIPEFKWS +HQRLL+D+LF+LETD+ 
Sbjct: 418 FSPGPRTNMFRIPEFKWSPMHQRLLTDLLFALETDVH 454

Binds to type II regulatory subunits of protein kinase A and anchors/targets them to the membrane. May anchor the kinase to cytoskeletal and/or organelle-associated proteins.

Gallus gallus (taxid: 9031)

>sp|Q8NFP9|NBEA_HUMAN Neurobeachin OS=Homo sapiens GN=NBEA PE=1 SV=3

 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 26/37 (70%), Positives = 31/37 (83%)

Query: 2    FSPGPARPPFRIPEFKWSYIHQRLLSDVLFSLETDIQ 38
            FSPGP    FRIPEFKWS +HQRLL+D+LF+LETD+ 
Sbjct: 1320 FSPGPRTTMFRIPEFKWSPMHQRLLTDLLFALETDVH 1356

Binds to type II regulatory subunits of protein kinase A and anchors/targets them to the membrane. May anchor the kinase to cytoskeletal and/or organelle-associated proteins.

Homo sapiens (taxid: 9606)

>sp|Q9EPN1|NBEA_MOUSE Neurobeachin OS=Mus musculus GN=Nbea PE=1 SV=1

 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 26/37 (70%), Positives = 31/37 (83%)

Query: 2    FSPGPARPPFRIPEFKWSYIHQRLLSDVLFSLETDIQ 38
            FSPGP    FRIPEFKWS +HQRLL+D+LF+LETD+ 
Sbjct: 1310 FSPGPRTTMFRIPEFKWSPMHQRLLTDLLFALETDVH 1346

Binds to type II regulatory subunits of protein kinase A and anchors/targets them to the membrane. May anchor the kinase to cytoskeletal and/or organelle-associated proteins. May have a role in membrane trafficking.

Mus musculus (taxid: 10090)

>sp|Q9ESE1|LRBA_MOUSE Lipopolysaccharide-responsive and beige-like anchor protein OS=Mus musculus GN=Lrba PE=1 SV=1

 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 23/28 (82%), Positives = 27/28 (96%)

Query: 11   FRIPEFKWSYIHQRLLSDVLFSLETDIQ 38
            FRIPEFKWS +HQRLL+D+LFS+ETDIQ
Sbjct: 1301 FRIPEFKWSQMHQRLLTDLLFSIETDIQ 1328

May be involved in coupling signal transduction and vesicle trafficking to enable polarized secretion and/or membrane deposition of immune effector molecules.

Mus musculus (taxid: 10090)

>sp|P50851|LRBA_HUMAN Lipopolysaccharide-responsive and beige-like anchor protein OS=Homo sapiens GN=LRBA PE=1 SV=4

 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 22/28 (78%), Positives = 26/28 (92%)

Query: 11   FRIPEFKWSYIHQRLLSDVLFSLETDIQ 38
            FRIPEF WS +HQRLL+D+LFS+ETDIQ
Sbjct: 1304 FRIPEFNWSQMHQRLLTDLLFSIETDIQ 1331

May be involved in coupling signal transduction and vesicle trafficking to enable polarized secretion and/or membrane deposition of immune effector molecules.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	78
312384812	2590	hypothetical protein AND_01512 [Anophele	0.487	0.014	0.973	7e-16
195046432	3712	GH24603 [Drosophila grimshawi] gi|193892	0.487	0.010	0.973	2e-15
195554289	734	GD24748 [Drosophila simulans] gi|1942028	0.487	0.051	0.973	3e-15
195396793	3654	GJ16846 [Drosophila virilis] gi|19414678	0.487	0.010	0.973	3e-15
2393880	2359	A-kinase anchor protein DAKAP550 [Drosop	0.487	0.016	0.973	5e-15
195340685	1720	GM12392 [Drosophila sechellia] gi|194131	0.487	0.022	0.973	8e-15
157137403	1103	neurobeachin [Aedes aegypti] gi|10888090	0.487	0.034	0.973	9e-15
345481241	3146	PREDICTED: neurobeachin-like [Nasonia vi	0.487	0.012	0.973	1e-14
322794630	2330	hypothetical protein SINV_14055 [Solenop	0.487	0.016	0.973	1e-14
242005019	2211	conserved hypothetical protein [Pediculu	0.487	0.017	0.973	1e-14

>gi|312384812|gb|EFR29447.1| hypothetical protein AND_01512 [Anopheles darlingi]

 Score = 87.8 bits (216), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 37/38 (97%), Positives = 37/38 (97%)

Query: 1   MFSPGPARPPFRIPEFKWSYIHQRLLSDVLFSLETDIQ 38
           MFSPGP RPPFRIPEFKWSYIHQRLLSDVLFSLETDIQ
Sbjct: 835 MFSPGPTRPPFRIPEFKWSYIHQRLLSDVLFSLETDIQ 872

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195046432|ref|XP_001992152.1| GH24603 [Drosophila grimshawi] gi|193892993|gb|EDV91859.1| GH24603 [Drosophila grimshawi]

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/38 (97%), Positives = 37/38 (97%)

Query: 1    MFSPGPARPPFRIPEFKWSYIHQRLLSDVLFSLETDIQ 38
            MFSPGP RPPFRIPEFKWSYIHQRLLSDVLFSLETDIQ
Sbjct: 1698 MFSPGPTRPPFRIPEFKWSYIHQRLLSDVLFSLETDIQ 1735

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195554289|ref|XP_002076869.1| GD24748 [Drosophila simulans] gi|194202887|gb|EDX16463.1| GD24748 [Drosophila simulans]

 Score = 85.9 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 37/38 (97%), Positives = 37/38 (97%)

Query: 1   MFSPGPARPPFRIPEFKWSYIHQRLLSDVLFSLETDIQ 38
           MFSPGP RPPFRIPEFKWSYIHQRLLSDVLFSLETDIQ
Sbjct: 178 MFSPGPTRPPFRIPEFKWSYIHQRLLSDVLFSLETDIQ 215

Source: Drosophila simulans

Species: Drosophila simulans

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195396793|ref|XP_002057013.1| GJ16846 [Drosophila virilis] gi|194146780|gb|EDW62499.1| GJ16846 [Drosophila virilis]

 Score = 85.5 bits (210), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 37/38 (97%), Positives = 37/38 (97%)

Query: 1    MFSPGPARPPFRIPEFKWSYIHQRLLSDVLFSLETDIQ 38
            MFSPGP RPPFRIPEFKWSYIHQRLLSDVLFSLETDIQ
Sbjct: 1693 MFSPGPTRPPFRIPEFKWSYIHQRLLSDVLFSLETDIQ 1730

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|2393880|gb|AAB83959.1| A-kinase anchor protein DAKAP550 [Drosophila melanogaster]

 Score = 85.1 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 37/38 (97%), Positives = 37/38 (97%)

Query: 1    MFSPGPARPPFRIPEFKWSYIHQRLLSDVLFSLETDIQ 38
            MFSPGP RPPFRIPEFKWSYIHQRLLSDVLFSLETDIQ
Sbjct: 1663 MFSPGPTRPPFRIPEFKWSYIHQRLLSDVLFSLETDIQ 1700

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195340685|ref|XP_002036943.1| GM12392 [Drosophila sechellia] gi|194131059|gb|EDW53102.1| GM12392 [Drosophila sechellia]

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 37/38 (97%), Positives = 37/38 (97%)

Query: 1    MFSPGPARPPFRIPEFKWSYIHQRLLSDVLFSLETDIQ 38
            MFSPGP RPPFRIPEFKWSYIHQRLLSDVLFSLETDIQ
Sbjct: 1274 MFSPGPTRPPFRIPEFKWSYIHQRLLSDVLFSLETDIQ 1311

Source: Drosophila sechellia

Species: Drosophila sechellia

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157137403|ref|XP_001657059.1| neurobeachin [Aedes aegypti] gi|108880900|gb|EAT45125.1| AAEL003609-PA, partial [Aedes aegypti]

 Score = 84.3 bits (207), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 37/38 (97%), Positives = 37/38 (97%)

Query: 1   MFSPGPARPPFRIPEFKWSYIHQRLLSDVLFSLETDIQ 38
           MFSPGP RPPFRIPEFKWSYIHQRLLSDVLFSLETDIQ
Sbjct: 817 MFSPGPTRPPFRIPEFKWSYIHQRLLSDVLFSLETDIQ 854

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345481241|ref|XP_001602669.2| PREDICTED: neurobeachin-like [Nasonia vitripennis]

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 37/38 (97%), Positives = 38/38 (100%)

Query: 1    MFSPGPARPPFRIPEFKWSYIHQRLLSDVLFSLETDIQ 38
            MFSPGP+RPPFRIPEFKWSYIHQRLLSDVLFSLETDIQ
Sbjct: 1567 MFSPGPSRPPFRIPEFKWSYIHQRLLSDVLFSLETDIQ 1604

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322794630|gb|EFZ17638.1| hypothetical protein SINV_14055 [Solenopsis invicta]

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 37/38 (97%), Positives = 37/38 (97%)

Query: 1    MFSPGPARPPFRIPEFKWSYIHQRLLSDVLFSLETDIQ 38
            MFSPGP RPPFRIPEFKWSYIHQRLLSDVLFSLETDIQ
Sbjct: 1425 MFSPGPTRPPFRIPEFKWSYIHQRLLSDVLFSLETDIQ 1462

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242005019|ref|XP_002423372.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212506416|gb|EEB10634.1| conserved hypothetical protein [Pediculus humanus corporis]

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 37/38 (97%), Positives = 37/38 (97%)

Query: 1    MFSPGPARPPFRIPEFKWSYIHQRLLSDVLFSLETDIQ 38
            MFSPGP RPPFRIPEFKWSYIHQRLLSDVLFSLETDIQ
Sbjct: 1291 MFSPGPTRPPFRIPEFKWSYIHQRLLSDVLFSLETDIQ 1328

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	78
FB|FBgn0086911	3578	rg "rugose" [Drosophila melano	0.487	0.010	0.973	3.7e-14
UNIPROTKB|Q9DDD5	793	NBEA "Neurobeachin" [Gallus ga	0.461	0.045	0.722	9.3e-09
UNIPROTKB|F1MF64	2809	NBEA "Uncharacterized protein"	0.461	0.012	0.722	3.2e-08
UNIPROTKB|F1P3D0	2855	NBEA "Neurobeachin" [Gallus ga	0.461	0.012	0.722	3.2e-08
MGI|MGI:1347075	2936	Nbea "neurobeachin" [Mus muscu	0.461	0.012	0.722	3.3e-08
UNIPROTKB|Q8NFP9	2946	NBEA "Neurobeachin" [Homo sapi	0.461	0.012	0.722	3.3e-08
RGD|1311428	2709	Lrba "LPS-responsive vesicle t	0.423	0.012	0.764	2.8e-07
UNIPROTKB|E1BND6	2786	Bt.111067 "Uncharacterized pro	0.423	0.011	0.727	5.9e-07
UNIPROTKB|E1C6E6	2850	LRBA "Uncharacterized protein"	0.358	0.009	0.821	6.4e-07
MGI|MGI:1933162	2856	Lrba "LPS-responsive beige-lik	0.358	0.009	0.821	1.6e-06

FB|FBgn0086911 rg "rugose" [Drosophila melanogaster (taxid:7227)]

 Score = 201 (75.8 bits), Expect = 3.7e-14, P = 3.7e-14
 Identities = 37/38 (97%), Positives = 37/38 (97%)

Query:     1 MFSPGPARPPFRIPEFKWSYIHQRLLSDVLFSLETDIQ 38
             MFSPGP RPPFRIPEFKWSYIHQRLLSDVLFSLETDIQ
Sbjct:  1632 MFSPGPTRPPFRIPEFKWSYIHQRLLSDVLFSLETDIQ 1669

GO:0016021 "integral to membrane" evidence=IDA

GO:0008104 "protein localization" evidence=NAS;IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0051018 "protein kinase A binding" evidence=NAS;IDA

GO:0042675 "compound eye cone cell differentiation" evidence=IMP

GO:0007528 "neuromuscular junction development" evidence=IMP

GO:0008355 "olfactory learning" evidence=IMP

GO:0043025 "neuronal cell body" evidence=IDA

GO:0016319 "mushroom body development" evidence=IMP

UNIPROTKB|Q9DDD5 NBEA "Neurobeachin" [Gallus gallus (taxid:9031)]

 Score = 143 (55.4 bits), Expect = 9.3e-09, P = 9.3e-09
 Identities = 26/36 (72%), Positives = 31/36 (86%)

Query:     2 FSPGPARPPFRIPEFKWSYIHQRLLSDVLFSLETDI 37
             FSPGP    FRIPEFKWS +HQRLL+D+LF+LETD+
Sbjct:   418 FSPGPRTNMFRIPEFKWSPMHQRLLTDLLFALETDV 453

GO:0005737 "cytoplasm" evidence=IEA

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|F1MF64 NBEA "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 144 (55.7 bits), Expect = 3.2e-08, P = 3.2e-08
 Identities = 26/36 (72%), Positives = 31/36 (86%)

Query:     2 FSPGPARPPFRIPEFKWSYIHQRLLSDVLFSLETDI 37
             FSPGP    FRIPEFKWS +HQRLL+D+LF+LETD+
Sbjct:  1183 FSPGPRTTMFRIPEFKWSPMHQRLLTDLLFALETDV 1218

GO:0019901 "protein kinase binding" evidence=IEA

GO:0012505 "endomembrane system" evidence=IEA

GO:0008104 "protein localization" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005802 "trans-Golgi network" evidence=IEA

UNIPROTKB|F1P3D0 NBEA "Neurobeachin" [Gallus gallus (taxid:9031)]

 Score = 144 (55.7 bits), Expect = 3.2e-08, P = 3.2e-08
 Identities = 26/36 (72%), Positives = 31/36 (86%)

Query:     2 FSPGPARPPFRIPEFKWSYIHQRLLSDVLFSLETDI 37
             FSPGP    FRIPEFKWS +HQRLL+D+LF+LETD+
Sbjct:  1223 FSPGPRTTMFRIPEFKWSPMHQRLLTDLLFALETDV 1258

GO:0005802 "trans-Golgi network" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0008104 "protein localization" evidence=IEA

GO:0012505 "endomembrane system" evidence=IEA

GO:0019901 "protein kinase binding" evidence=IEA

MGI|MGI:1347075 Nbea "neurobeachin" [Mus musculus (taxid:10090)]

 Score = 144 (55.7 bits), Expect = 3.3e-08, P = 3.3e-08
 Identities = 26/36 (72%), Positives = 31/36 (86%)

Query:     2 FSPGPARPPFRIPEFKWSYIHQRLLSDVLFSLETDI 37
             FSPGP    FRIPEFKWS +HQRLL+D+LF+LETD+
Sbjct:  1310 FSPGPRTTMFRIPEFKWSPMHQRLLTDLLFALETDV 1345

GO:0005802 "trans-Golgi network" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0006605 "protein targeting" evidence=ISS

GO:0006892 "post-Golgi vesicle-mediated transport" evidence=NAS

GO:0008104 "protein localization" evidence=IDA

GO:0012505 "endomembrane system" evidence=IDA

GO:0016020 "membrane" evidence=IEA

GO:0019901 "protein kinase binding" evidence=IDA

GO:0030054 "cell junction" evidence=IEA

GO:0045202 "synapse" evidence=IEA

GO:0045211 "postsynaptic membrane" evidence=NAS

GO:0051018 "protein kinase A binding" evidence=NAS

UNIPROTKB|Q8NFP9 NBEA "Neurobeachin" [Homo sapiens (taxid:9606)]

 Score = 144 (55.7 bits), Expect = 3.3e-08, P = 3.3e-08
 Identities = 26/36 (72%), Positives = 31/36 (86%)

Query:     2 FSPGPARPPFRIPEFKWSYIHQRLLSDVLFSLETDI 37
             FSPGP    FRIPEFKWS +HQRLL+D+LF+LETD+
Sbjct:  1320 FSPGPRTTMFRIPEFKWSPMHQRLLTDLLFALETDV 1355

GO:0008104 "protein localization" evidence=IEA

GO:0019901 "protein kinase binding" evidence=IEA

GO:0005829 "cytosol" evidence=ISS

GO:0012505 "endomembrane system" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISS

GO:0005802 "trans-Golgi network" evidence=ISS

RGD|1311428 Lrba "LPS-responsive vesicle trafficking, beach and anchor containing" [Rattus norvegicus (taxid:10116)]

 Score = 135 (52.6 bits), Expect = 2.8e-07, P = 2.8e-07
 Identities = 26/34 (76%), Positives = 31/34 (91%)

Query:    46 NSRPP-FRIPEFKWSYIHQRLLSDVLFSLETDIQ 78
             +SRP  FRIPEFKWS +HQRLL+D+LFS+ETDIQ
Sbjct:  1150 DSRPTMFRIPEFKWSQMHQRLLTDLLFSIETDIQ 1183

GO:0005764 "lysosome" evidence=ISO

GO:0005783 "endoplasmic reticulum" evidence=ISO

GO:0005802 "trans-Golgi network" evidence=ISO

GO:0005886 "plasma membrane" evidence=ISO

GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=ISO

UNIPROTKB|E1BND6 Bt.111067 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 132 (51.5 bits), Expect = 5.9e-07, P = 5.9e-07
 Identities = 24/33 (72%), Positives = 30/33 (90%)

Query:    46 NSRPPFRIPEFKWSYIHQRLLSDVLFSLETDIQ 78
             +SR  FRIPEF+WS +HQRLL+D+LFS+ETDIQ
Sbjct:  1225 DSRSMFRIPEFRWSQMHQRLLTDLLFSIETDIQ 1257

GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=IEA

UNIPROTKB|E1C6E6 LRBA "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 128 (50.1 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
 Identities = 23/28 (82%), Positives = 27/28 (96%)

Query:    11 FRIPEFKWSYIHQRLLSDVLFSLETDIQ 38
             FRIPEFKWS +HQRLL+D+LFS+ETDIQ
Sbjct:  1287 FRIPEFKWSLMHQRLLTDLLFSIETDIQ 1314

GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=IEA

MGI|MGI:1933162 Lrba "LPS-responsive beige-like anchor" [Mus musculus (taxid:10090)]

 Score = 128 (50.1 bits), Expect = 1.6e-06, P = 1.6e-06
 Identities = 23/28 (82%), Positives = 27/28 (96%)

Query:    11 FRIPEFKWSYIHQRLLSDVLFSLETDIQ 38
             FRIPEFKWS +HQRLL+D+LFS+ETDIQ
Sbjct:  1301 FRIPEFKWSQMHQRLLTDLLFSIETDIQ 1328

GO:0005764 "lysosome" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005802 "trans-Golgi network" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0007165 "signal transduction" evidence=TAS

GO:0008104 "protein localization" evidence=ISA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=IDA

GO:0016197 "endosomal transport" evidence=TAS

GO:0051018 "protein kinase A binding" evidence=ISA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9W4E2	NBEA_DROME	No assigned EC number	0.9736	0.4871	0.0106	yes	N/A
Q8NFP9	NBEA_HUMAN	No assigned EC number	0.7027	0.4743	0.0125	yes	N/A
Q9EPN1	NBEA_MOUSE	No assigned EC number	0.7027	0.4743	0.0126	yes	N/A
Q9DDD5	NBEA_CHICK	No assigned EC number	0.7027	0.4743	0.0466	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	78
d1adta3	144	Second Zn-domain of early E2A DNA-binding protein,	87.11

>d1adta3 g.51.1.1 (A:386-529) Second Zn-domain of early E2A DNA-binding protein, ADDBP {Human adenovirus type 5 [TaxId: 28285]}

class: Small proteins
fold: Zn-binding domains of ADDBP
superfamily: Zn-binding domains of ADDBP
family: Zn-binding domains of ADDBP
domain: Second Zn-domain of early E2A DNA-binding protein, ADDBP
species: Human adenovirus type 5 [TaxId: 28285]

Probab=87.11  E-value=0.055  Score=36.51  Aligned_cols=16  Identities=50%  Similarity=0.995  Sum_probs=13.0

Q ss_pred             CCCcccCccchhHHHH
Q psy10492          8 RPPFRIPEFKWSYIHQ   23 (78)
Q Consensus         8 ~~~~RiPEF~Ws~~H~   23 (78)
                      .|++.+|||||+.-||
T Consensus       109 ~~~l~iPeFkW~p~~q  124 (144)
T d1adta3         109 LPRMVVPQFKWSTKHQ  124 (144)
T ss_dssp             CCCCCCCBCCCCGGGS
T ss_pred             CCcccccceeecccce
Confidence            3789999999997654