Psyllid ID: psy10535

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-
TGVIDWCNGLGILLIAAVFIYWFVFYYTVIKPFLFPILLRYSIDTTTKAFKNFIMTVRISVQIILSIAFVIFILIDAWDQKRRLISLLGFGVFILLGYVFSKYPNRVPWKIVIWGVIMQLAIGLVTIRLSLGRYVLECIGHHVQTFLEFAYQGAAFVYGDEIVTVRISVQIILSIAFVIFILIDAWDQKRRLISLLGFGVFILLGYVFSKYPNRVPWKIVIWGVIMQLAIGLVTIRLSLGRYVLECIGHHVQTFLEFAYQGAAFVYGDEIVFVYHVFAFKVLSVIFFMSFIIQICFYYGWLQSIFLKLGWLLQVSLGTTVAESVNTCASVFLGMTEAPLLIKPYLPDLTRSELTAVMLGGFSTVAGTVFAAYTSLGVQAAHIITASIMTAPSALSYSKILYPETEISKTTISNIKKWKSDDLNVIDAACKGAQIGTEMVLGIIANIIAFVSFVAFCNAMLIWFGSLVGVEDLTIEFIFGKIFIPLTWIMGVEPSQCEEVARLIGLKTVINEFVAYKELGRVKKLGLLSPRSEAIATYSLCGFANPGSVGCLIATLNTLVPSQRRNTIDLAFRAFIGGCVVCLLTACIVDNI
cccccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHEEEEcccHHHHHHHHHHHHHHHHHHHHccccEEEccEEEEEEHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcHHccccEEccccccccccEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHccccccccccHHHHccccccccHHHHHHHHHcccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHccccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
cccEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccEEccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccEEEEcccccccccEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccccccEEEcccHHHccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHccHccHHHHHHHHHHHHHHHHHHHHHHHHHHccc
tgvidwcnGLGILLIAAVFIYWFVFYYTVIKPFLFPILLRYSIDTTTKAFKNFIMTVRISVQIILSIAFVIFILIDAWDQKRRLISLLGFGVFILLGYVfskypnrvpwKIVIWGVIMQLAIGLVTIRLSLGRYVLECIGHHVQTFLEFAYQGAAFVYGDEIVTVRISVQIILSIAFVIFILIDAWDQKRRLISLLGFGVFILLGYVfskypnrvpwKIVIWGVIMQLAIGLVTIRLSLGRYVLECIGHHVQTFLEFAYQGAAFVYGDEIVFVYHVFAFKVLSVIFFMSFIIQICFYYGWLQSIFLKLGWLLQVSLGTTVAESVNTCASVFLgmteapllikpylpdltrsELTAVMLGGFSTVAGTVFAAYTSLGVQAAHIITASImtapsalsyskilypeteisKTTISNIKKWKSDDLNVIDAACKGAQIGTEMVLGIIANIIAFVSFVAFCNAMLIWFGSlvgvedltiefifgkifipltwimgvepsqCEEVARLIGLKTVINEFVAYKELgrvkklgllsprseaIATYslcgfanpgsvGCLIATLntlvpsqrrnTIDLAFRAFIGGCVVCLLTACIVDNI
tgvidwcnGLGILLIAAVFIYWFVFYYTVIKPFLFPILLRYSIDTTTKAFKNFIMTVRISVQIILSIAFVIFILIDAWDQKRRLISLLGFGVFILLGYVFSKYPNRVPWKIVIWGVIMQLAIGLVTIRLSLGRYVLECIGHHVQTFLEFAYQGAAFVYGDEIVTVRISVQIILSIAFVIFILIDAWDQKRRLISLLGFGVFILLGYVFSKYPNRVPWKIVIWGVIMQLAIGLVTIRLSLGRYVLECIGHHVQTFLEFAYQGAAFVYGDEIVFVYHVFAFKVLSVIFFMSFIIQICFYYGWLQSIFLKLGWLLQVSLGTTVAESVNTCASVFLGMTEAPLLIKPYLPDLTRSELTAVMLGGFSTVAGTVFAAYTSLGVQAAHIITASIMTAPSALSYSKILYPETEISKTTISNIKKWKSDDLNVIDAACKGAQIGTEMVLGIIANIIAFVSFVAFCNAMLIWFGSLVGVEDLTIEFIFGKIFIPLTWIMGVEPSQCEEVARLIGLKTVINEFVAYKELGRVKKLGLLSPRSEAIATYSLCGFANPGSVGCLIATLNTLVPSQRRNTIDLAFRAFIGGCVVCLLTACIVDNI
TGVIDWCNGLGILLIAAVFIYWFVFYYTVIKPFLFPILLRYSIDTTTKAFKNFIMTVRISVQIILSIAFVIFILIDAWDQKRRLISLLGFGVFILLGYVFSKYPNRVPWKIVIWGVIMQLAIGLVTIRLSLGRYVLECIGHHVQTFLEFAYQGAAFVYGDEIVTVRISVQIILSIAFVIFILIDAWDQKRRLISLLGFGVFILLGYVFSKYPNRVPWKIVIWGVIMQLAIGLVTIRLSLGRYVLECIGHHVQTFLEFAYQGAAFVYGDEIVFVYHVFAFKVLSVIFFMSFIIQICFYYGWLQSIFLKLGWLLQVSLGTTVAESVNTCASVFLGMTEAPLLIKPYLPDLTRSELTAVMLGGFSTVAGTVFAAYTSLGVQAAHIITASIMTAPSALSYSKILYPETEISKTTISNIKKWKSDDLNVIDAACKGAQIGTEMVLGIIANIIAFVSFVAFCNAMLIWFGSLVGVEDLTIEFIFGKIFIPLTWIMGVEPSQCEEVARLIGLKTVINEFVAYKELGRVKKLGLLSPRSEAIATYSLCGFANPGSVGCLIATLNTLVPSQRRNTIDLAFRAFIGGCVVCLLTACIVDNI
**VIDWCNGLGILLIAAVFIYWFVFYYTVIKPFLFPILLRYSIDTTTKAFKNFIMTVRISVQIILSIAFVIFILIDAWDQKRRLISLLGFGVFILLGYVFSKYPNRVPWKIVIWGVIMQLAIGLVTIRLSLGRYVLECIGHHVQTFLEFAYQGAAFVYGDEIVTVRISVQIILSIAFVIFILIDAWDQKRRLISLLGFGVFILLGYVFSKYPNRVPWKIVIWGVIMQLAIGLVTIRLSLGRYVLECIGHHVQTFLEFAYQGAAFVYGDEIVFVYHVFAFKVLSVIFFMSFIIQICFYYGWLQSIFLKLGWLLQVSLGTTVAESVNTCASVFLGMTEAPLLIKPYLPDLTRSELTAVMLGGFSTVAGTVFAAYTSLGVQAAHIITASIMTAPSALSYSKILYPETEISKTTISNIKKWKSDDLNVIDAACKGAQIGTEMVLGIIANIIAFVSFVAFCNAMLIWFGSLVGVEDLTIEFIFGKIFIPLTWIMGVEPSQCEEVARLIGLKTVINEFVAYKELGRVKKLGLLSPRSEAIATYSLCGFANPGSVGCLIATLNTLVPSQRRNTIDLAFRAFIGGCVVCLLTACIVD**
TGVIDWCNGLGILLIAAVFIYWFVFYYTVIKPFLFPILLRYSIDTTTKAFKNFIMTVRISVQIILSIAFVIFILIDAWDQKRRLISLLGFGVFILLGYVFSKYPNRVPWKIVIWGVIMQLAIGLVTIRLSLGRYVLECIGHHVQTFLEFAYQGAAFVYGDEIVTVRISVQIILSIAFVIFILIDAWDQKRRLISLLGFGVFILLGYVFSKYPNRVPWKIVIWGVIMQLAIGLVTIRLSLGRYVLECIGHHVQTFLEFAYQGAAFVYGDEIVFVYHVFAFKVLSVIFFMSFIIQICFYYGWLQSIFLKLGWLLQVSLGTTVAESVNTCASVFLGMTEAPLLIKPYLPDLTRSELTAVMLGGFSTVAGTVFAAYTSLGVQAAHIITASIMTAPSALSYSKILYPETE******************VIDAACKGAQIGTEMVLGIIANIIAFVSFVAFCNAMLIWFGSLVGVEDLTIEFIFGKIFIPLTWIMGVEPSQCEEVARLIGLKTVINEFVAYKELGRVKKLGLLSPRSEAIATYSLCGFANPGSVGCLIATLNTLVPSQRRNTIDLAFRAFIGGCVVCLLTACIVDNI
TGVIDWCNGLGILLIAAVFIYWFVFYYTVIKPFLFPILLRYSIDTTTKAFKNFIMTVRISVQIILSIAFVIFILIDAWDQKRRLISLLGFGVFILLGYVFSKYPNRVPWKIVIWGVIMQLAIGLVTIRLSLGRYVLECIGHHVQTFLEFAYQGAAFVYGDEIVTVRISVQIILSIAFVIFILIDAWDQKRRLISLLGFGVFILLGYVFSKYPNRVPWKIVIWGVIMQLAIGLVTIRLSLGRYVLECIGHHVQTFLEFAYQGAAFVYGDEIVFVYHVFAFKVLSVIFFMSFIIQICFYYGWLQSIFLKLGWLLQVSLGTTVAESVNTCASVFLGMTEAPLLIKPYLPDLTRSELTAVMLGGFSTVAGTVFAAYTSLGVQAAHIITASIMTAPSALSYSKILYPETEISKTTISNIKKWKSDDLNVIDAACKGAQIGTEMVLGIIANIIAFVSFVAFCNAMLIWFGSLVGVEDLTIEFIFGKIFIPLTWIMGVEPSQCEEVARLIGLKTVINEFVAYKELGRVKKLGLLSPRSEAIATYSLCGFANPGSVGCLIATLNTLVPSQRRNTIDLAFRAFIGGCVVCLLTACIVDNI
*GVIDWCNGLGILLIAAVFIYWFVFYYTVIKPFLFPILLRYSIDTTTKAFKNFIMTVRISVQIILSIAFVIFILIDAWDQKRRLISLLGFGVFILLGYVFSKYPNRVPWKIVIWGVIMQLAIGLVTIRLSLGRYVLECIGHHVQTFLEFAYQGAAFVYGDEIVTVRISVQIILSIAFVIFILIDAWDQKRRLISLLGFGVFILLGYVFSKYPNRVPWKIVIWGVIMQLAIGLVTIRLSLGRYVLECIGHHVQTFLEFAYQGAAFVYGDEIVFVYHVFAFKVLSVIFFMSFIIQICFYYGWLQSIFLKLGWLLQVSLGTTVAESVNTCASVFLGMTEAPLLIKPYLPDLTRSELTAVMLGGFSTVAGTVFAAYTSLGVQAAHIITASIMTAPSALSYSKILYPETEISKTTISNIKKWKSDDLNVIDAACKGAQIGTEMVLGIIANIIAFVSFVAFCNAMLIWFGSLVGVEDLTIEFIFGKIFIPLTWIMGVEPSQCEEVARLIGLKTVINEFVAYKELGRVKKLGLLSPRSEAIATYSLCGFANPGSVGCLIATLNTLVPSQRRNTIDLAFRAFIGGCVVCLLTACIVDNI
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TGVIDWCNGLGILLIAAVFIYWFVFYYTVIKPFLFPILLRYSIDTTTKAFKNFIMTVRISVQIILSIAFVIFILIDAWDQKRRLISLLGFGVFILLGYVFSKYPNRVPWKIVIWGVIMQLAIGLVTIRLSLGRYVLECIGHHVQTFLEFAYQGAAFVYGDEIVTVRISVQIILSIAFVIFILIDAWDQKRRLISLLGFGVFILLGYVFSKYPNRVPWKIVIWGVIMQLAIGLVTIRLSLGRYVLECIGHHVQTFLEFAYQGAAFVYGDEIVFVYHVFAFKVLSVIFFMSFIIQICFYYGWLQSIFLKLGWLLQVSLGTTVAESVNTCASVFLGMTEAPLLIKPYLPDLTRSELTAVMLGGFSTVAGTVFAAYTSLGVQAAHIITASIMTAPSALSYSKILYPETEISKTTISNIKKWKSDDLNVIDAACKGAQIGTEMVLGIIANIIAFVSFVAFCNAMLIWFGSLVGVEDLTIEFIFGKIFIPLTWIMGVEPSQCEEVARLIGLKTVINEFVAYKELGRVKKLGLLSPRSEAIATYSLCGFANPGSVGCLIATLNTLVPSQRRNTIDLAFRAFIGGCVVCLLTACIVDNI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query591 2.2.26 [Sep-21-2011]
Q9UA35683 Solute carrier family 28 N/A N/A 0.725 0.628 0.399 7e-92
Q9HAS3691 Solute carrier family 28 yes N/A 0.673 0.575 0.432 2e-90
Q8VIH3705 Solute carrier family 28 yes N/A 0.673 0.564 0.420 3e-88
Q9ERH8703 Solute carrier family 28 yes N/A 0.673 0.566 0.415 5e-88
Q62674648 Sodium/nucleoside cotrans no N/A 0.695 0.634 0.391 4e-86
Q62773659 Sodium/nucleoside cotrans no N/A 0.697 0.625 0.380 2e-85
O88627660 Sodium/nucleoside cotrans no N/A 0.695 0.622 0.374 5e-84
O62667647 Sodium/nucleoside cotrans no N/A 0.697 0.636 0.387 6e-84
Q9MZT2658 Sodium/nucleoside cotrans no N/A 0.695 0.624 0.386 8e-84
O43868658 Sodium/nucleoside cotrans no N/A 0.695 0.624 0.386 2e-83
>sp|Q9UA35|S28A3_EPTST Solute carrier family 28 member 3 OS=Eptatretus stoutii GN=SLC28A3 PE=2 SV=1 Back     alignment and function desciption
 Score =  338 bits (867), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 184/461 (39%), Positives = 281/461 (60%), Gaps = 32/461 (6%)

Query: 158 YGDEIVTVRISVQIILS---------------IAFVIFILID-AWDQKRRLISLLGFGVF 201
           YGD+I       Q  L                +A ++++ +D A     ++I   G  ++
Sbjct: 146 YGDKIAEALKPCQKFLDNHWSIIRWFVYGALLLAVILWLTLDTAKRGANQVIPFFGLILY 205

Query: 202 ILLGYVFSKYPNRVPWKIVIWGVIMQLAIGLVTIRLSLGRYVLECIGHHVQTFLEFAYQG 261
           ILL ++FSK+P +V W+IVIWG+++Q   GL+ +R   G      +G  VQTFL++   G
Sbjct: 206 ILLVFIFSKHPTKVRWRIVIWGLLLQFIFGLIILRTKPGLDAFNWLGIQVQTFLKYTDAG 265

Query: 262 AAFVYGDEIVFVYHVFAFKVLSVIFFMSFIIQICFYYGWLQSIFLKLGWLLQVSLGTTVA 321
           + F++GD+  F  H FAF VL ++ F S ++ + +Y G +Q + LK+GWL+Q+++GT+  
Sbjct: 266 SRFLFGDD--FQDHFFAFAVLPIVIFFSTVMSMMYYLGLMQWLILKVGWLMQITMGTSPM 323

Query: 322 ESVNTCASVFLGMTEAPLLIKPYLPDLTRSELTAVMLGGFSTVAGTVFAAYTSLGVQAAH 381
           ES+ +  ++F+G TE+PLLI+PYL DLT SE+ +VM  GF+T+AG+V  AY SLG+ AAH
Sbjct: 324 ESMVSAGNIFVGQTESPLLIRPYLADLTISEMHSVMSSGFATIAGSVLGAYISLGIPAAH 383

Query: 382 IITASIMTAPSALSYSKILYPETEISK-TTISNIKKWKSDDLNVIDAACKGAQIGTEMVL 440
           ++TAS+M+AP+AL+ SK  +PET+ SK +T ++IK  K  + N+++AA +GA     +V 
Sbjct: 384 LLTASVMSAPAALAISKTFWPETKKSKNSTQTSIKLEKGQENNLVEAASQGASAAVPLVA 443

Query: 441 GIIANIIAFVSFVAFCNAMLIWFGSLVGVEDLTIEFIFGKIFIPLTWIMGVEPSQCEEVA 500
            I AN+IAF++ +AF NA L W GS+      + E I   + +P  ++MGV       VA
Sbjct: 444 NIAANLIAFLAVLAFINATLSWLGSMFNYPQFSFEIICSYVLMPFAFMMGVNYDDSFLVA 503

Query: 501 RLIGLKTVINEFVAYKELGRV---KKLG----------LLSPRSEAIATYSLCGFANPGS 547
            L+G+KT  NEFVAY+ L      ++ G           +S RSEAIATY+LCGFAN GS
Sbjct: 504 ELLGMKTFFNEFVAYQRLSEYIHNRESGGPLFVDGVRQYMSVRSEAIATYALCGFANFGS 563

Query: 548 VGCLIATLNTLVPSQRRNTIDLAFRAFIGGCVVCLLTACIV 588
           +G +I  L++L P ++ +      RA I G + C  TACI 
Sbjct: 564 LGIMIGGLSSLAPHRKSDIASCGIRALIAGTIACFSTACIA 604
Sodium-dependent, pyrimidine- and purine-selective. Involved in the homeostasis of endogenous nucleosides. Exhibits the transport characteristics of the nucleoside transport system cib or N3 subtype (N3/cib) (with marked transport of both thymidine and inosine). Employs a 2:1 sodium/nucleoside ratio. Also able to transport gemcitabine, 3'-azido-3'-deoxythymidine (AZT), ribavirin and 3-deazauridine.
Eptatretus stoutii (taxid: 7765)
>sp|Q9HAS3|S28A3_HUMAN Solute carrier family 28 member 3 OS=Homo sapiens GN=SLC28A3 PE=1 SV=1 Back     alignment and function description
>sp|Q8VIH3|S28A3_RAT Solute carrier family 28 member 3 OS=Rattus norvegicus GN=Slc28a3 PE=2 SV=1 Back     alignment and function description
>sp|Q9ERH8|S28A3_MOUSE Solute carrier family 28 member 3 OS=Mus musculus GN=Slc28a3 PE=2 SV=1 Back     alignment and function description
>sp|Q62674|S28A1_RAT Sodium/nucleoside cotransporter 1 OS=Rattus norvegicus GN=Slc28a1 PE=1 SV=1 Back     alignment and function description
>sp|Q62773|S28A2_RAT Sodium/nucleoside cotransporter 2 OS=Rattus norvegicus GN=Slc28a2 PE=1 SV=1 Back     alignment and function description
>sp|O88627|S28A2_MOUSE Sodium/nucleoside cotransporter 2 OS=Mus musculus GN=Slc28a2 PE=2 SV=2 Back     alignment and function description
>sp|O62667|S28A1_PIG Sodium/nucleoside cotransporter 1 OS=Sus scrofa GN=SLC28A1 PE=2 SV=1 Back     alignment and function description
>sp|Q9MZT2|S28A1_RABIT Sodium/nucleoside cotransporter 1 OS=Oryctolagus cuniculus GN=SLC28A1 PE=2 SV=1 Back     alignment and function description
>sp|O43868|S28A2_HUMAN Sodium/nucleoside cotransporter 2 OS=Homo sapiens GN=SLC28A2 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query591
328699430565 PREDICTED: sodium/nucleoside cotransport 0.697 0.729 0.578 1e-139
157106942505 sodium/nucleoside cotransporter [Aedes a 0.722 0.845 0.518 1e-119
170050467586 sodium/nucleoside cotransporter 1 [Culex 0.695 0.701 0.535 1e-118
345490985587 PREDICTED: solute carrier family 28 memb 0.774 0.780 0.458 1e-117
307183739578 Sodium/nucleoside cotransporter 1 [Campo 0.702 0.717 0.515 1e-117
340724442555 PREDICTED: solute carrier family 28 memb 0.697 0.742 0.506 1e-117
350409940576 PREDICTED: solute carrier family 28 memb 0.697 0.715 0.503 1e-117
380022056573 PREDICTED: solute carrier family 28 memb 0.695 0.717 0.504 1e-115
322794113590 hypothetical protein SINV_03962 [Solenop 0.768 0.769 0.472 1e-115
328785058592 PREDICTED: solute carrier family 28 memb 0.695 0.694 0.507 1e-115
>gi|328699430|ref|XP_001946626.2| PREDICTED: sodium/nucleoside cotransporter 2-like isoform 1 [Acyrthosiphon pisum] gi|328699432|ref|XP_003240931.1| PREDICTED: sodium/nucleoside cotransporter 2-like isoform 2 [Acyrthosiphon pisum] Back     alignment and taxonomy information
 Score =  502 bits (1293), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 239/413 (57%), Positives = 317/413 (76%), Gaps = 1/413 (0%)

Query: 176 AFVIFILIDAWDQKRRLISLLGFGVFILLGYVFSKYPNRVPWKIVIWGVIMQLAIGLVTI 235
           +FV+FI  D  + + RL+ L G GVF+L+G++FSK+   V W  V  G+  Q+ IG++TI
Sbjct: 141 SFVLFIFFDTKNNRHRLVPLAGLGVFVLVGFIFSKHRGHVNWTTVASGLATQITIGMLTI 200

Query: 236 RLSLGRYVLECIGHHVQTFLEFAYQGAAFVYGDEIVFVYHVFAFKVLSVIFFMSFIIQIC 295
           R  +GR +++ +G   + F  FAY GA   YG+E++  Y VFAFKVLSV+FFM F+I+I 
Sbjct: 201 RWQVGRSIVQAVGELAEKFFSFAYVGAKVTYGNELIDNYGVFAFKVLSVLFFMCFVIEIL 260

Query: 296 FYYGWLQSIFLKLGWLLQVSLGTTVAESVNTCASVFLGMTEAPLLIKPYLPDLTRSELTA 355
           FYYG +Q+I +KLGW LQ  LGTT AESVNTCASVFLGM+EAP++IKPYLPDLT SE+ A
Sbjct: 261 FYYGIIQTIVIKLGWCLQKLLGTTAAESVNTCASVFLGMSEAPIIIKPYLPDLTESEIHA 320

Query: 356 VMLGGFSTVAGTVFAAYTSLGVQAAHIITASIMTAPSALSYSKILYPETEISKTTISNI- 414
           VM+GGFSTVAGTVFAAYTS G+  A++ITAS+M+AP+ALS+SK+++PETE S  ++  I 
Sbjct: 321 VMMGGFSTVAGTVFAAYTSFGIDPAYLITASVMSAPTALSFSKLIFPETEKSMNSVDQIC 380

Query: 415 KKWKSDDLNVIDAACKGAQIGTEMVLGIIANIIAFVSFVAFCNAMLIWFGSLVGVEDLTI 474
            K  +D+ NV+DAACKGAQ G +++  I+ANI+AFVSFVAF NA++ W G LVG++DLT 
Sbjct: 381 TKKTTDEGNVMDAACKGAQFGLKIIGAIVANIVAFVSFVAFINAIISWLGHLVGLDDLTF 440

Query: 475 EFIFGKIFIPLTWIMGVEPSQCEEVARLIGLKTVINEFVAYKELGRVKKLGLLSPRSEAI 534
           E++ GKI IP+TW++GV+PS+CE V +LIGLK  INEFVAYK++G + K G L+ +SE +
Sbjct: 441 EYVLGKILIPVTWLLGVDPSECEAVGKLIGLKMTINEFVAYKQMGDLIKEGKLNRKSEIV 500

Query: 535 ATYSLCGFANPGSVGCLIATLNTLVPSQRRNTIDLAFRAFIGGCVVCLLTACI 587
           AT++LC FANPGS+G +IATL TL P+QR       FRAF+GG V C LTA I
Sbjct: 501 ATFALCSFANPGSIGSMIATLTTLCPTQRSAITKNVFRAFLGGTVTCFLTAAI 553

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|157106942|ref|XP_001649552.1| sodium/nucleoside cotransporter [Aedes aegypti] gi|108879688|gb|EAT43913.1| AAEL004654-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|170050467|ref|XP_001861324.1| sodium/nucleoside cotransporter 1 [Culex quinquefasciatus] gi|167872062|gb|EDS35445.1| sodium/nucleoside cotransporter 1 [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|345490985|ref|XP_001601110.2| PREDICTED: solute carrier family 28 member 3-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|307183739|gb|EFN70413.1| Sodium/nucleoside cotransporter 1 [Camponotus floridanus] Back     alignment and taxonomy information
>gi|340724442|ref|XP_003400591.1| PREDICTED: solute carrier family 28 member 3-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|350409940|ref|XP_003488895.1| PREDICTED: solute carrier family 28 member 3-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|380022056|ref|XP_003694871.1| PREDICTED: solute carrier family 28 member 3-like [Apis florea] Back     alignment and taxonomy information
>gi|322794113|gb|EFZ17322.1| hypothetical protein SINV_03962 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|328785058|ref|XP_394011.4| PREDICTED: solute carrier family 28 member 3-like [Apis mellifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query591
FB|FBgn0025709603 CG8083 [Drosophila melanogaste 0.786 0.771 0.453 1e-107
FB|FBgn0033371590 CNT1 "Concentrative Nucleoside 0.708 0.710 0.441 2.6e-95
MGI|MGI:2137361703 Slc28a3 "solute carrier family 0.698 0.587 0.409 3.8e-91
RGD|621224705 Slc28a3 "solute carrier family 0.698 0.585 0.416 3.4e-90
UNIPROTKB|Q8VIH3705 Slc28a3 "Solute carrier family 0.698 0.585 0.416 3.4e-90
UNIPROTKB|F5GYE3622 SLC28A3 "Solute carrier family 0.698 0.663 0.425 6.5e-90
UNIPROTKB|Q9HAS3691 SLC28A3 "Solute carrier family 0.698 0.597 0.425 6.5e-90
UNIPROTKB|F1P2E4602 SLC28A3 "Uncharacterized prote 0.698 0.686 0.418 1.7e-89
UNIPROTKB|F1MGR1697 LOC100335178 "Uncharacterized 0.698 0.592 0.406 3.2e-88
ZFIN|ZDB-GENE-050419-117654 si:dkey-24l11.1 "si:dkey-24l11 0.778 0.703 0.382 2.1e-86
FB|FBgn0025709 CG8083 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 1065 (380.0 bits), Expect = 1.0e-107, P = 1.0e-107
 Identities = 216/476 (45%), Positives = 326/476 (68%)

Query:   114 WGVIMQLAIGLVTIRLSLGRYVLE-CIGHHV-QTFLE-FAYQGAAFVYGDEIVTVRISVQ 170
             +G+++ L +G + + L    YV +  +GH + + +++ F+ +   F     +V++  S+ 
Sbjct:   104 YGMLL-LLLGFIYLGLFY-YYVFKPMVGHSLHRNYIKPFSKKWHNFSR-TRVVSLA-SIA 159

Query:   171 IILSIAFVIFILIDAWDQKRRLISLLGFGVFILLGYVFSKYPNRVPWKIVIWGVIMQLAI 230
             ++L++   IF+  +  D+ ++L+SL+    FIL GYVFS     + W+IVI G+  Q  +
Sbjct:   160 LLLAL-LAIFVYFECRDETQKLVSLVAPCFFILCGYVFSTNRRAINWRIVITGITCQFLL 218

Query:   231 GLVTIRLSLGRYVLECIGHHVQTFLEFAYQGAAFVYGDEIVFVYHVFAFKVLSVIFFMSF 290
             G+  IR  +GR + EC+G+ V TFL +A  GA FV+GD +V   +VFAF +L VIFF SF
Sbjct:   219 GIFCIRWEVGRKIFECLGNKVATFLGYATDGAEFVFGDFLVN-NNVFAFAILPVIFFFSF 277

Query:   291 IIQICFYYGWLQSIFLKLGWLLQVSLGTTVAESVNTCASVFLGMTEAPLLIKPYLPDLTR 350
              I I +Y G +Q + +KLGW+LQ  LGTTV ESV   A++FLGM+E+PLLI+PY+  LT+
Sbjct:   278 FISILYYMGTMQWVVIKLGWILQQILGTTVCESVTAAANIFLGMSESPLLIRPYINKLTK 337

Query:   351 SELTAVMLGGFSTVAGTVFAAYTSLGVQAAHIITASIMTAPSALSYSKILYPETEISKTT 410
             SE+ ++M+ GF+TV+GTV AAY S G  AAH+IT+S+M AP+ L+ SK+  PETE S+T+
Sbjct:   338 SEIHSIMVSGFATVSGTVLAAYLSFGASAAHLITSSVMAAPATLAISKLYMPETEESQTS 397

Query:   411 ISNIKKWKSDDLNVIDAACKGAQIGTEMVLGIIANIIAFVSFVAFCNAMLIWFGSLVGVE 470
               +I+  KS D +++DAA  GA     +VLGIIANI+AFV+F+AF N ++ WFG LVG+E
Sbjct:   398 SDSIELEKSQDSSLLDAASSGASNAVPIVLGIIANIVAFVAFIAFLNGLVSWFGYLVGLE 457

Query:   471 DLTIEFIFGKIFIPLTWIMGVEPSQCEEVARLIGLKTVINEFVAYKELGRVKKLGLLSPR 530
              +  E+IF K+FIPL W MGV    C+ +A+++  KT+INEFVAY+ LG+  +   ++ R
Sbjct:   458 QIDFEWIFSKLFIPLVWAMGVPKEDCDIIAKVVATKTIINEFVAYERLGQYIENNDITAR 517

Query:   531 SEAIATYSLCGFANPGSVGCLIATLNTLVPSQRRNTID-LAFRAFIGGCVVCLLTA 585
             S  IAT+++CGFANP S+G LI +L+ + P  RR+TI  +AFRAF+ G +VC ++A
Sbjct:   518 SAGIATFAICGFANPSSLGILIGSLSAMAP-HRRSTITAVAFRAFVVGSIVCFVSA 572
GO:0005415 "nucleoside:sodium symporter activity" evidence=ISS
GO:0001882 "nucleoside binding" evidence=IEA
GO:0006810 "transport" evidence=IEA
GO:0016020 "membrane" evidence=IEA
FB|FBgn0033371 CNT1 "Concentrative Nucleoside Transporter 1" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
MGI|MGI:2137361 Slc28a3 "solute carrier family 28 (sodium-coupled nucleoside transporter), member 3" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|621224 Slc28a3 "solute carrier family 28 (sodium-coupled nucleoside transporter), member 3" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q8VIH3 Slc28a3 "Solute carrier family 28 member 3" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F5GYE3 SLC28A3 "Solute carrier family 28 member 3" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q9HAS3 SLC28A3 "Solute carrier family 28 member 3" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1P2E4 SLC28A3 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1MGR1 LOC100335178 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-050419-117 si:dkey-24l11.1 "si:dkey-24l11.1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O32115YUTK_BACSUNo assigned EC number0.35440.66150.9678yesN/A
P44742Y519_HAEINNo assigned EC number0.34320.66490.9424yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query591
TIGR00804401 TIGR00804, nupC, nucleoside transporter 1e-119
COG1972404 COG1972, NupC, Nucleoside permease [Nucleotide tra 1e-104
pfam07662208 pfam07662, Nucleos_tra2_C, Na+ dependent nucleosid 9e-68
pfam0177375 pfam01773, Nucleos_tra2_N, Na+ dependent nucleosid 9e-14
pfam0177375 pfam01773, Nucleos_tra2_N, Na+ dependent nucleosid 9e-14
TIGR00804401 TIGR00804, nupC, nucleoside transporter 5e-12
COG1972404 COG1972, NupC, Nucleoside permease [Nucleotide tra 8e-09
pfam07670104 pfam07670, Gate, Nucleoside recognition 3e-07
>gnl|CDD|233135 TIGR00804, nupC, nucleoside transporter Back     alignment and domain information 
 Score =  358 bits (922), Expect = e-119
 Identities = 166/398 (41%), Positives = 249/398 (62%), Gaps = 1/398 (0%)

Query: 192 LISLLGFGVFILLGYVFSKYPNRVPWKIVIWGVIMQLAIGLVTIRLSLGRYVLECIGHHV 251
           LIS +G  VFIL+ ++ S     + W+ V+  +++Q  +GL+ +R   G +  + +   +
Sbjct: 1   LISFVGLVVFILIAFLCSSNKKAISWRTVVSALVLQFLLGLIVLRTPPGFWAFQGLADQI 60

Query: 252 QTFLEFAYQGAAFVYGDEIVFVYHVFAFKVLSVIFFMSFIIQICFYYGWLQSIFLKLGWL 311
           Q  L +A +G++FV+G  +V    VFAF+VL +I F S +I I +Y G +Q +  K+GW 
Sbjct: 61  QILLSYANEGSSFVFGPPLVQDLFVFAFQVLPIIIFFSALISILYYLGIMQWVIRKIGWF 120

Query: 312 LQVSLGTTVAESVNTCASVFLGMTEAPLLIKPYLPDLTRSELTAVMLGGFSTVAGTVFAA 371
           LQ ++GTT  ES +  A++FLG TEAPL+I+PYL D+T SEL  VM  G +T+AG+V  A
Sbjct: 121 LQKAMGTTKLESFSAAANIFLGQTEAPLVIRPYLGDMTDSELFTVMTSGMATIAGSVLGA 180

Query: 372 YTSLGVQAAHIITASIMTAPSALSYSKILYPETEISKTTISNIKKWKSDDLNVIDAACKG 431
           Y S+GV A ++I AS+M AP AL+++K++YPE E SK       K +  D N  +AA  G
Sbjct: 181 YISMGVPATYLIAASVMAAPCALAFAKLIYPEVEESKEKSEEDVKLEEGDQNFFEAASNG 240

Query: 432 AQIGTEMVLGIIANIIAFVSFVAFCNAMLIWFGSLVGVEDLTIEFIFGKIFIPLTWIMGV 491
           A  G ++V  + A +IAFV+ +A  N +L W G  VG   L+ + IFG +F PL ++MGV
Sbjct: 241 ALAGVKVVANVAAMLIAFVALLALINGILSWVGGWVGYGGLSFQLIFGYVFRPLAFLMGV 300

Query: 492 EPSQCEEVARLIGLKTVINEFVAYKELGRVKKLGL-LSPRSEAIATYSLCGFANPGSVGC 550
             S    VA+L+G K  +NEFVAY +L +  +  L LSP++EAI T++LCGFAN  S+G 
Sbjct: 301 PWSDAPLVAQLMGTKLAVNEFVAYLDLSQYLQTRLWLSPKTEAIITFALCGFANFSSIGI 360

Query: 551 LIATLNTLVPSQRRNTIDLAFRAFIGGCVVCLLTACIV 588
           ++  L +LVP ++     L  RA   G +V L++A I 
Sbjct: 361 ILGGLGSLVPKRKSVISRLVLRALCAGTLVSLMSATIA 398

The Concentrative Nucleoside Transporter (CNT) Family (TC 2.A.41) Members of the CNT family mediate nucleoside uptake. In bacteria they are energized by H+ symport, but in mammals they are energized by Na+ symport. The different transporters exhibit differing specificities for nucleosides. The E. coli NupC permease transports all nucleosides (both ribo- and deoxyribonucleosides) except hypoxanthine and guanine nucleosides. The B. subtilis NupC is specific for pyrimidine nucleosides (cytidine and uridine and the corresponding deoxyribonucleosides). The mammalian permease members of the CNT family also exhibit differing specificities. Thus, rats possess at least two NupC homologues, one specific for both purine and pyrimidine nucleosides and one specific for purine nucleosides. At least three paralogues have been characterized from humans. One human homologue(CNT1) transports pyrimidine nucleosides and adenosine, but deoxyadenosine and guanosine are poor substrates of this permease. Another (CNT2) is selective for purine nucleosides. Alteration of just a few amino acyl residues in TMSs 7 and 8 interconverts their specificities [Transport and binding proteins, Nucleosides, purines and pyrimidines]. Length = 401
>gnl|CDD|224883 COG1972, NupC, Nucleoside permease [Nucleotide transport and metabolism] Back     alignment and domain information
>gnl|CDD|219502 pfam07662, Nucleos_tra2_C, Na+ dependent nucleoside transporter C-terminus Back     alignment and domain information
>gnl|CDD|201962 pfam01773, Nucleos_tra2_N, Na+ dependent nucleoside transporter N-terminus Back     alignment and domain information
>gnl|CDD|201962 pfam01773, Nucleos_tra2_N, Na+ dependent nucleoside transporter N-terminus Back     alignment and domain information
>gnl|CDD|233135 TIGR00804, nupC, nucleoside transporter Back     alignment and domain information
>gnl|CDD|224883 COG1972, NupC, Nucleoside permease [Nucleotide transport and metabolism] Back     alignment and domain information
>gnl|CDD|219507 pfam07670, Gate, Nucleoside recognition Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 591
KOG3747|consensus602 100.0
TIGR00804401 nupC nucleoside transporter. One human homologue(C 100.0
COG1972404 NupC Nucleoside permease [Nucleotide transport and 100.0
PF07662210 Nucleos_tra2_C: Na+ dependent nucleoside transport 100.0
COG1972404 NupC Nucleoside permease [Nucleotide transport and 100.0
TIGR00804401 nupC nucleoside transporter. One human homologue(C 99.97
PF0177375 Nucleos_tra2_N: Na+ dependent nucleoside transport 99.84
PF0177375 Nucleos_tra2_N: Na+ dependent nucleoside transport 99.78
KOG3747|consensus602 98.86
PF07662210 Nucleos_tra2_C: Na+ dependent nucleoside transport 98.14
PF07670109 Gate: Nucleoside recognition; InterPro: IPR011642 97.64
PRK10519151 hypothetical protein; Provisional 95.83
PRK10519151 hypothetical protein; Provisional 95.1
TIGR02871362 spore_ylbJ sporulation integral membrane protein Y 95.03
TIGR00437591 feoB ferrous iron transporter FeoB. FeoB (773 amin 84.09
>KOG3747|consensus Back     alignment and domain information 
Probab=100.00  E-value=1.3e-146  Score=1159.79  Aligned_cols=479  Identities=43%  Similarity=0.744  Sum_probs=447.7

Q ss_pred             cccccchhhHHHHHHHHHHHHHHHHHHHhhchhhhHHHhhhcccccccccchh-hhHHHHHHHHHHHH-HHHHHhhhchh
Q psy10535          2 GVIDWCNGLGILLIAAVFIYWFVFYYTVIKPFLFPILLRYSIDTTTKAFKNFI-MTVRISVQIILSIA-FVIFILIDAWD   79 (591)
Q Consensus         2 ~~~d~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~-~~~f~~~d~~~   79 (591)
                      +.+|||||++++++++.++||  +||+++||.+|++++|...||..+.+.++. .|..++...+..++ +++|+.+||++
T Consensus        97 cilNfq~a~~l~vvt~~~~~~--l~~~~lk~~vG~kl~~~~l~p~~~k~~~fs~~w~v~~~~~~~~l~~l~~~l~~dt~~  174 (602)
T KOG3747|consen   97 CILNFQRALPLFVVTLFFIYC--LYYWVLKPIVGHKLFRNYLKPFGGKRLLFSRLWFVSLVAKAAFLAALVAWLIFDTRQ  174 (602)
T ss_pred             HHHhHHhhhhHHHHHHHHHHH--HHHHHHHHHhhhhHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            578999999999999999986  899999999999999888899888886543 45544444444444 88999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHhhcchhHHHHHHhHHHHHHHHHhhhcCceeeec
Q psy10535         80 QKRRLISLLGFGVFILLGYVFSKYPNRVPWKIVIWGVIMQLAIGLVTIRLSLGRYVLECIGHHVQTFLEFAYQGAAFVYG  159 (591)
Q Consensus        80 ~~~~l~sl~Gl~v~l~ia~l~S~nrk~I~Wr~V~~gl~lQ~ilal~vL~t~~G~~if~~is~~~~~lL~~a~~G~~FvFG  159 (591)
                      +++|++|+.|++++++++|++||||++||||+|.||+++|+++|++++                                
T Consensus       175 ~~~qLv~f~g~v~fIl~~f~fSk~~~~V~WriV~~gl~~qfllgllvl--------------------------------  222 (602)
T KOG3747|consen  175 DPQQLVGFGGPVFFILFLFVFSKHHRAVNWRIVTSGLGLQFLLGLLVL--------------------------------  222 (602)
T ss_pred             cHHHhhccccHHHHHHHHHhhcCCccccchhhhhHHHHHHHHHhheee--------------------------------
Confidence            999999999999999999999998888888888888888777755555                                


Q ss_pred             ccccchhhhHHHHHHHHHhhhhheecchhhHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHhhhhheeecch
Q psy10535        160 DEIVTVRISVQIILSIAFVIFILIDAWDQKRRLISLLGFGVFILLGYVFSKYPNRVPWKIVIWGVIMQLAIGLVTIRLSL  239 (591)
Q Consensus       160 ~l~~~~~fFf~~Ll~Ivfi~fli~~~~~~~~rL~sl~Gi~v~l~ia~llS~~rk~I~wr~Vi~gL~lQ~~lalivl~~~~  239 (591)
                                                                                                  |||.
T Consensus       223 ----------------------------------------------------------------------------R~~~  226 (602)
T KOG3747|consen  223 ----------------------------------------------------------------------------RWPT  226 (602)
T ss_pred             ----------------------------------------------------------------------------ecCc
Confidence                                                                                        5555


Q ss_pred             hHHHHHHhhHHHHHHHhhhcCCceeecCcccccccceehhhHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCC
Q psy10535        240 GRYVLECIGHHVQTFLEFAYQGAAFVYGDEIVFVYHVFAFKVLSVIFFMSFIIQICFYYGWLQSIFLKLGWLLQVSLGTT  319 (591)
Q Consensus       240 G~~~~~~i~~~v~~ll~~~~~G~~FvfG~~~~~~~~~Faf~VLp~IIffsaLisiLyy~Gimq~ii~~i~~~l~~~mG~s  319 (591)
                      ||.+|+|++++++.+|+|+++|++|||||.++ |..+|||++||+|+|||+++|+|||+|+|||+++|++|.||.++||+
T Consensus       227 G~~~Fq~Lg~~V~~FL~Ya~~GA~FVFGd~i~-d~~VFaF~~LpiiifFS~vvSiLyYlG~mQwvl~K~~W~mqv~~GTT  305 (602)
T KOG3747|consen  227 GRWIFQWLGEQVQIFLEYAQAGASFVFGDNIC-DLAVFAFAILPIIIFFSAVVSILYYLGLMQWVLQKSGWFMQVTIGTT  305 (602)
T ss_pred             chHHHHHHHHHHHHHHHHHhcCceEeecchhh-hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence            55666666777788888888888999998888 55599999999999999999999999999999999999999999999


Q ss_pred             cchhhhhhhhhcccccccceeeccccccCChhhHHHHHhhhhhhhHHHHHHHHHhcCCCcchHHHHhhhhhhHHHHHHhh
Q psy10535        320 VAESVNTCASVFLGMTEAPLLIKPYLPDLTRSELTAVMLGGFSTVAGTVFAAYTSLGVQAAHIITASIMTAPSALSYSKI  399 (591)
Q Consensus       320 ~~Es~~AaaniFlGqtEapllikpyl~~mt~sel~~vm~~G~atiagsvl~aY~~~g~~~~~lltAsvmsapaal~iaki  399 (591)
                      ++||++|++|+|+|||||||+|||||++||+||+|++||+|||||||||++||++||+||+||+|||+||||++|++||+
T Consensus       306 ~~ESv~aagniFlgmTEaPLlIrPYl~~lT~SElhaImTsGfAtvaGTVlgAYvsfGa~as~LitASVmaAP~sLA~sKL  385 (602)
T KOG3747|consen  306 PCESVNAAGNIFLGMTEAPLLIRPYLEKLTKSELHAIMTSGFATVAGTVLGAYVSFGASASSLITASVMAAPASLACSKL  385 (602)
T ss_pred             hhhhhhhhhhheeccccCceeechhhhhhhHHHHHHHHhccchhhhhhhHHHHHhcCCCHHHHHHHHHHhchHHHHHhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCcccccccccccccccCCCCCCHHHHHHHhHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCHHHHHh
Q psy10535        400 LYPETEISKTTISNIKKWKSDDLNVIDAACKGAQIGTEMVLGIIANIIAFVSFVAFCNAMLIWFGSLVGVEDLTIEFIFG  479 (591)
Q Consensus       400 ~~Pet~~~~~~~~~~~~~~~~~~n~~~A~~~Ga~~g~~la~~I~a~lIafvalial~n~~l~~~g~~~g~~~ltl~~ilg  479 (591)
                      +|||||||.+++|++|+|+++++|++||+++||.+.++++.||+||||||+|+++++|++++|+|+++|+|++|||+|+|
T Consensus       386 ~yPEtEEs~~~ee~~kLe~~~~~~lldaassga~aav~~V~~I~anlIaflAllaFlna~~swiGdLig~~gltFq~I~s  465 (602)
T KOG3747|consen  386 FYPETEESITKEEDIKLESGDDRNLLDAASSGAVAAVPIVLNIAANLIAFLALLAFLNAALSWIGDLIGYDGLTFQMIFS  465 (602)
T ss_pred             cCCccccccccccccccccCCcccHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHhHHHHHhCCCchhHHHHHHHHhhHhhhhhhhhhhhh-hhhhhcCCCCchhhHHHHHHHhcccChhhhHHHHhhhccc
Q psy10535        480 KIFIPLTWIMGVEPSQCEEVARLIGLKTVINEFVAYKEL-GRVKKLGLLSPRSEAIATYSLCGFANPGSVGCLIATLNTL  558 (591)
Q Consensus       480 yif~P~a~lmGvp~~d~~~vg~l~g~K~v~NEFvAy~~l-~~~~~~~~ls~rs~~I~t~aLcgFaN~~SiGi~ig~~~~l  558 (591)
                      |+|.|++|+|||||+||..|||+||+|+.+||||||++| +++++++++|+||+.|+||||||||||||+||++|++++|
T Consensus       466 yif~Pl~fmMGV~w~dc~~VA~lvg~KtfiNEFVAY~~Lsg~~v~~~kisvrs~~iaTfalCGFaN~sSlGI~ig~Ltsm  545 (602)
T KOG3747|consen  466 YIFIPLVFMMGVPWEDCLLVAQLVGTKTFINEFVAYENLSGELVKGGKISVRSELIATFALCGFANFSSLGIQIGGLTSM  545 (602)
T ss_pred             HHHHHHHHHhCCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCccchhHHHHHHHHHhccCCccchheeecccccc
Confidence            999999999999999999999999999999999999999 5688888999999999999999999999999999999999


Q ss_pred             CCCcccchHHHHHHHHHHHHHHHHHHHHhhhcC
Q psy10535        559 VPSQRRNTIDLAFRAFIGGCVVCLLTACIVDNI  591 (591)
Q Consensus       559 ap~r~~~ia~~~~ral~~g~la~~~tA~iaG~l  591 (591)
                      +|+||+|++|+++||+++|++||+|+||+||+|
T Consensus       546 aP~Rks~is~v~~RAl~aGai~cfm~A~~AGIL  578 (602)
T KOG3747|consen  546 APSRKSDISKVVLRALCAGAIACFMNACVAGIL  578 (602)
T ss_pred             CCcccchHHHHHHHHHHhhhHHHHHHHHHhhee
Confidence            999999999999999999999999999999986

>TIGR00804 nupC nucleoside transporter Back     alignment and domain information
>COG1972 NupC Nucleoside permease [Nucleotide transport and metabolism] Back     alignment and domain information
>PF07662 Nucleos_tra2_C: Na+ dependent nucleoside transporter C-terminus; InterPro: IPR011657 This entry consists of nucleoside transport proteins Back     alignment and domain information
>COG1972 NupC Nucleoside permease [Nucleotide transport and metabolism] Back     alignment and domain information
>TIGR00804 nupC nucleoside transporter Back     alignment and domain information
>PF01773 Nucleos_tra2_N: Na+ dependent nucleoside transporter N-terminus; InterPro: IPR002668 This entry contains nucleoside transport proteins Back     alignment and domain information
>PF01773 Nucleos_tra2_N: Na+ dependent nucleoside transporter N-terminus; InterPro: IPR002668 This entry contains nucleoside transport proteins Back     alignment and domain information
>KOG3747|consensus Back     alignment and domain information
>PF07662 Nucleos_tra2_C: Na+ dependent nucleoside transporter C-terminus; InterPro: IPR011657 This entry consists of nucleoside transport proteins Back     alignment and domain information
>PF07670 Gate: Nucleoside recognition; InterPro: IPR011642 This region in the nucleoside transporter proteins are responsible for determining nucleoside specificity in the human CNT1 and CNT2 proteins (e Back     alignment and domain information
>PRK10519 hypothetical protein; Provisional Back     alignment and domain information
>PRK10519 hypothetical protein; Provisional Back     alignment and domain information
>TIGR02871 spore_ylbJ sporulation integral membrane protein YlbJ Back     alignment and domain information
>TIGR00437 feoB ferrous iron transporter FeoB Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query591
3tij_A424 Crystal Structure Of A Concentrative Nucleoside Tra 4e-57
>pdb|3TIJ|A Chain A, Crystal Structure Of A Concentrative Nucleoside Transporter From Vibrio Cholerae Length = 424 Back     alignment and structure 
Iteration: 1

 Score =  219 bits (557), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 138/408 (33%), Positives = 227/408 (55%), Gaps = 14/408 (3%)
Query: 193 ISLLGFGVFILLGYVFSKYPNRVPWKIVIWGVIMQLAIGLVTIRLSLGRYVLECIGHHVQ 252
           +SL+G  V + +  + S     +  + V     +Q ++G   + +  G+ +L      V 
Sbjct: 11  MSLIGMAVLLGIAVLLSSNRKAINLRTVGGAFAIQFSLGAFILYVPWGQELLRGFSDAVS 70
Query: 253 TFLEFAYQGAAFVYG--------DEIVFVYHVFAFKVLSVIFFMSFIIQICFYYGWLQSI 304
             + +   G +F++G        +       +FAF+VL  + F S +I + +Y G +Q +
Sbjct: 71  NVINYGNDGTSFLFGGLVSGKMFEVFGGGGFIFAFRVLPTLIFFSALISVLYYLGVMQWV 130
Query: 305 FLKLGWLLQVSLGTTVAESVNTCASVFLGMTEAPLLIKPYLPDLTRSELTAVMLGGFSTV 364
              LG  LQ +LGT+ AES++  A++F+G TEAPL+++P++P +T+SEL AVM GG +++
Sbjct: 131 IRILGGGLQKALGTSRAESMSAAANIFVGQTEAPLVVRPFVPKMTQSELFAVMCGGLASI 190
Query: 365 AGTVFAAYTSLGVQAAHIITASIMTAPSALSYSKILYPETEISKTTISNIKKWKSDD--L 422
           AG V A Y S+GV+  +++ AS M AP  L ++K++ PETE  +    +I     DD   
Sbjct: 191 AGGVLAGYASMGVKIEYLVAASFMAAPGGLLFAKLMMPETEKPQDN-EDITLDGGDDKPA 249
Query: 423 NVIDAACKGAQIGTEMVLGIIANIIAFVSFVAFCNAMLIWFGSLVGVEDLTIEFIFGKIF 482
           NVIDAA  GA  G ++ L + A +IAF+  +A  N ML   G   G+ +L +E + G +F
Sbjct: 250 NVIDAAAGGASAGLQLALNVGAMLIAFIGLIALINGMLGGIGGWFGMPELKLEMLLGWLF 309
Query: 483 IPLTWIMGVEPSQCEEVARLIGLKTVINEFVAYKELGRVKKLG---LLSPRSEAIATYSL 539
            PL +++GV  ++       IGLKTV NEFVAY +           +LS +++AI +++L
Sbjct: 310 APLAFLIGVPWNEATVAGEFIGLKTVANEFVAYSQFAPYLTEAAPVVLSEKTKAIISFAL 369
Query: 540 CGFANPGSVGCLIATLNTLVPSQRRNTIDLAFRAFIGGCVVCLLTACI 587
           CGFAN  S+  L+  L +L P +R +   +  +A I G +  L+ A I
Sbjct: 370 CGFANLSSIAILLGGLGSLAPKRRGDIARMGVKAVIAGTLSNLMAATI 417
  Database: pdbaa

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query591
3tij_A424 NUPC family protein; membrane transporter, nucleos 1e-137
3tij_A424 NUPC family protein; membrane transporter, nucleos 4e-17
>3tij_A NUPC family protein; membrane transporter, nucleoside transporter, drug transport uridine, nucleosides, membrane protein; HET: URI DMU; 2.44A {Vibrio cholerae} Length = 424 Back     alignment and structure
 Score =  404 bits (1039), Expect = e-137
 Identities = 135/410 (32%), Positives = 224/410 (54%), Gaps = 12/410 (2%)

Query: 191 RLISLLGFGVFILLGYVFSKYPNRVPWKIVIWGVIMQLAIGLVTIRLSLGRYVLECIGHH 250
             +SL+G  V + +  + S     +  + V     +Q ++G   + +  G+ +L      
Sbjct: 9   LFMSLIGMAVLLGIAVLLSSNRKAINLRTVGGAFAIQFSLGAFILYVPWGQELLRGFSDA 68

Query: 251 VQTFLEFAYQGAAFVYGDEIVFVY--------HVFAFKVLSVIFFMSFIIQICFYYGWLQ 302
           V   + +   G +F++G  +             +FAF+VL  + F S +I + +Y G +Q
Sbjct: 69  VSNVINYGNDGTSFLFGGLVSGKMFEVFGGGGFIFAFRVLPTLIFFSALISVLYYLGVMQ 128

Query: 303 SIFLKLGWLLQVSLGTTVAESVNTCASVFLGMTEAPLLIKPYLPDLTRSELTAVMLGGFS 362
            +   LG  LQ +LGT+ AES++  A++F+G TEAPL+++P++P +T+SEL AVM GG +
Sbjct: 129 WVIRILGGGLQKALGTSRAESMSAAANIFVGQTEAPLVVRPFVPKMTQSELFAVMCGGLA 188

Query: 363 TVAGTVFAAYTSLGVQAAHIITASIMTAPSALSYSKILYPETEISKT-TISNIKKWKSDD 421
           ++AG V A Y S+GV+  +++ AS M AP  L ++K++ PETE  +      +       
Sbjct: 189 SIAGGVLAGYASMGVKIEYLVAASFMAAPGGLLFAKLMMPETEKPQDNEDITLDGGDDKP 248

Query: 422 LNVIDAACKGAQIGTEMVLGIIANIIAFVSFVAFCNAMLIWFGSLVGVEDLTIEFIFGKI 481
            NVIDAA  GA  G ++ L + A +IAF+  +A  N ML   G   G+ +L +E + G +
Sbjct: 249 ANVIDAAAGGASAGLQLALNVGAMLIAFIGLIALINGMLGGIGGWFGMPELKLEMLLGWL 308

Query: 482 FIPLTWIMGVEPSQCEEVARLIGLKTVINEFVAYKELGRVKKLG---LLSPRSEAIATYS 538
           F PL +++GV  ++       IGLKTV NEFVAY +           +LS +++AI +++
Sbjct: 309 FAPLAFLIGVPWNEATVAGEFIGLKTVANEFVAYSQFAPYLTEAAPVVLSEKTKAIISFA 368

Query: 539 LCGFANPGSVGCLIATLNTLVPSQRRNTIDLAFRAFIGGCVVCLLTACIV 588
           LCGFAN  S+  L+  L +L P +R +   +  +A I G +  L+ A I 
Sbjct: 369 LCGFANLSSIAILLGGLGSLAPKRRGDIARMGVKAVIAGTLSNLMAATIA 418
>3tij_A NUPC family protein; membrane transporter, nucleoside transporter, drug transport uridine, nucleosides, membrane protein; HET: URI DMU; 2.44A {Vibrio cholerae} Length = 424 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query591
3tij_A424 NUPC family protein; membrane transporter, nucleos 100.0
3tij_A424 NUPC family protein; membrane transporter, nucleos 99.98
>3tij_A NUPC family protein; membrane transporter, nucleoside transporter, drug transport uridine, nucleosides, membrane protein; HET: URI DMU; 2.44A {Vibrio cholerae} Back     alignment and structure
Probab=100.00  E-value=3.5e-138  Score=1100.87  Aligned_cols=404  Identities=34%  Similarity=0.598  Sum_probs=382.2

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHhhhhheeecchhHHHHHHhhHHHHHHHhhhcCCceeec
Q psy10535        187 DQKRRLISLLGFGVFILLGYVFSKYPNRVPWKIVIWGVIMQLAIGLVTIRLSLGRYVLECIGHHVQTFLEFAYQGAAFVY  266 (591)
Q Consensus       187 ~~~~rL~sl~Gi~v~l~ia~llS~~rk~I~wr~Vi~gL~lQ~~lalivl~~~~G~~~~~~i~~~v~~ll~~~~~G~~Fvf  266 (591)
                      ..|++++|++|++++++++|++|+|||+||||+|++|+.+|+++|++++|||.||++++|++++++++++|+++|++|+|
T Consensus         5 ~~M~~l~sl~Gi~v~l~ia~l~S~nrk~I~wr~V~~gl~lQ~~la~~vL~~~~G~~~~~~i~~~v~~ll~~a~~G~~FvF   84 (424)
T 3tij_A            5 PRMSLFMSLIGMAVLLGIAVLLSSNRKAINLRTVGGAFAIQFSLGAFILYVPWGQELLRGFSDAVSNVINYGNDGTSFLF   84 (424)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHCSCGGGCCHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhCCcccCChHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhChhhcC
Confidence            46889999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             Ccccccc---------cceehhhHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCcchhhhhhhhhccccccc
Q psy10535        267 GDEIVFV---------YHVFAFKVLSVIFFMSFIIQICFYYGWLQSIFLKLGWLLQVSLGTTVAESVNTCASVFLGMTEA  337 (591)
Q Consensus       267 G~~~~~~---------~~~Faf~VLp~IIffsaLisiLyy~Gimq~ii~~i~~~l~~~mG~s~~Es~~AaaniFlGqtEa  337 (591)
                      |+ ..++         +++|||+|||+|||||+++++|||+|+|||+++++||.+||+||+|++||++|++|+|+||||+
T Consensus        85 G~-l~~~~~~~~f~~~~~~Faf~vLp~IiFfsalisiLyy~Gimq~iI~~ig~~l~k~lg~s~~ES~~AaaniFlGqtEa  163 (424)
T 3tij_A           85 GG-LVSGKMFEVFGGGGFIFAFRVLPTLIFFSALISVLYYLGVMQWVIRILGGGLQKALGTSRAESMSAAANIFVGQTEA  163 (424)
T ss_dssp             GG-GGSTHHHHHHGGGGCCHHHHTHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHCCCHHHHHHHHHTTTSCTTTG
T ss_pred             Cc-ccCcccccccccccceeHHHHhHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHhCCCchhHHHHHHHHHhcCCCc
Confidence            97 4432         6899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ceeeccccccCChhhHHHHHhhhhhhhHHHHHHHHHhcCCCcchHHHHhhhhhhHHHHHHhhcCCccccccccccc-ccc
Q psy10535        338 PLLIKPYLPDLTRSELTAVMLGGFSTVAGTVFAAYTSLGVQAAHIITASIMTAPSALSYSKILYPETEISKTTISN-IKK  416 (591)
Q Consensus       338 pllikpyl~~mt~sel~~vm~~G~atiagsvl~aY~~~g~~~~~lltAsvmsapaal~iaki~~Pet~~~~~~~~~-~~~  416 (591)
                      |++||||+++|||||+|++||+||||||||+|++|++||+|++||+|||+||+|+++++||++|||||+|+++.++ .+.
T Consensus       164 pllikpyl~~mT~sEl~~vm~~GmatVaGsvl~aY~~~Gv~~~~LlaAsvMsaPa~l~iaKi~~Pete~~~~~~~~~~~~  243 (424)
T 3tij_A          164 PLVVRPFVPKMTQSELFAVMCGGLASIAGGVLAGYASMGVKIEYLVAASFMAAPGGLLFAKLMMPETEKPQDNEDITLDG  243 (424)
T ss_dssp             GGGGGGGSTTCCHHHHHHHHHHHHHCCCHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCC--------
T ss_pred             ceeehHhhhhCCHHHHHHHHHcchhHHHHHHHHHHHHcCCCHHHHHHHHHHHhhHHHHHHHhcCCCCCCccccccccccc
Confidence            9999999999999999999999999999999999999999999999999999999999999999999998765432 344


Q ss_pred             cCCCCCCHHHHHHHhHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCHHHHHhhhHhHHHHHhCCCchhH
Q psy10535        417 WKSDDLNVIDAACKGAQIGTEMVLGIIANIIAFVSFVAFCNAMLIWFGSLVGVEDLTIEFIFGKIFIPLTWIMGVEPSQC  496 (591)
Q Consensus       417 ~~~~~~n~~~A~~~Ga~~g~~la~~I~a~lIafvalial~n~~l~~~g~~~g~~~ltl~~ilgyif~P~a~lmGvp~~d~  496 (591)
                      ++++++|++||+++||+||+|+++||+||||+|+||+|++|++++|+|+++|+|++|||.|+||+|+|+||+|||||+||
T Consensus       244 ~~~~~~n~l~A~~~Ga~~G~kla~~I~AmLIaFvALiAliN~~l~~ig~~~g~~~lSlq~IlGyif~P~A~lmGVpw~d~  323 (424)
T 3tij_A          244 GDDKPANVIDAAAGGASAGLQLALNVGAMLIAFIGLIALINGMLGGIGGWFGMPELKLEMLLGWLFAPLAFLIGVPWNEA  323 (424)
T ss_dssp             ---CCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCTTCCHHHHHHHHHHHHHHHTTCCGGGH
T ss_pred             cccCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCccHHHHHHHHhHHHHHHhCCCHHHH
Confidence            45567899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhHhhhhhhhhhhhhhhhhhc---CCCCchhhHHHHHHHhcccChhhhHHHHhhhcccCCCcccchHHHHHHH
Q psy10535        497 EEVARLIGLKTVINEFVAYKELGRVKKL---GLLSPRSEAIATYSLCGFANPGSVGCLIATLNTLVPSQRRNTIDLAFRA  573 (591)
Q Consensus       497 ~~vg~l~g~K~v~NEFvAy~~l~~~~~~---~~ls~rs~~I~t~aLcgFaN~~SiGi~ig~~~~lap~r~~~ia~~~~ra  573 (591)
                      .++||+||||+++||||||+||++++++   +++||||++|+||||||||||||||||+|++++|+||||+|+||+++||
T Consensus       324 ~~vg~liG~Klv~NEFVAy~~L~~~~~~~~~~~ls~rs~~I~T~aLcGFAN~sSiGI~iGgl~~laP~r~~~ia~~g~ra  403 (424)
T 3tij_A          324 TVAGEFIGLKTVANEFVAYSQFAPYLTEAAPVVLSEKTKAIISFALCGFANLSSIAILLGGLGSLAPKRRGDIARMGVKA  403 (424)
T ss_dssp             HHHHHHHHHHHHTCHHHHHHHHGGGGSTTCSSCCCHHHHHHHHHHTCSCCSTHHHHHHHHHTGGGCGGGHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCHHHHHHHHHHHHHcccHHHHHHHHHhhhccCCchhhHHHHHHHHH
Confidence            9999999999999999999999999764   3699999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhhcC
Q psy10535        574 FIGGCVVCLLTACIVDNI  591 (591)
Q Consensus       574 l~~g~la~~~tA~iaG~l  591 (591)
                      +++|+++|+|||||||++
T Consensus       404 l~aGtlaslmSA~IAGl~  421 (424)
T 3tij_A          404 VIAGTLSNLMAATIAGFF  421 (424)
T ss_dssp             HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            999999999999999973
>3tij_A NUPC family protein; membrane transporter, nucleoside transporter, drug transport uridine, nucleosides, membrane protein; HET: URI DMU; 2.44A {Vibrio cholerae} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00