Psyllid ID: psy1060


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-
MQAIRTAGGTRKAKLRCVDATPESDNNMIVAPPSGDLMSDLAAKLQLRRKGISGSHNQMNENSTSSGNLMDKLLHNIPPPLAAGSSESDHDDTDTEPDWDD
cHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccccccccccccccHHHHHHccccccccccccccccccccccccccc
cHHHHHcccccccccccccccHHHHcccccccccccHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHcccccccccccccccccccccccccc
mqairtaggtrkaklrcvdatpesdnnmivappsgdLMSDLAAKLQLRRkgisgshnqmnenstssgnLMDKLlhnippplaagssesdhddtdtepdwdd
mqairtaggtrkaklrcvdatpesdnnmivappSGDLMSDLAAKLQLRRkgisgshnqmnenSTSSGNLMDKLLHNIPPPlaagssesdhddtdtepdwdd
MQAIRTAGGTRKAKLRCVDATPESDNNMIVAPPSGDLMSDLAAKLQLRRKGISGSHNQMNENSTSSGNLMDKLLHNIPPPLAAGssesdhddtdtepdwdd
*****************************************************************************************************
*QAIRT*G********************************LAAKLQ****************************************************W**
**************LRCVDATPESDNNMIVAPPSGDLMSDLAAKLQLRRKGISGSHNQMNENSTSSGNLMDKLLHNIPPPLAA******************
***********************************DLMSDLAAKLQLRRK***************************************************
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MQAIRTAGGTRKAKLRCVDATPESDNNMIVAPPSGDLMSDLAAKLQLRRKGISGSHNQMNENSTSSGNLMDKLLHNIPPPLAAGSSESDHDDTDTEPDWDD
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query101 2.2.26 [Sep-21-2011]
Q7JW27499 WAS protein family homolo yes N/A 0.970 0.196 0.443 3e-10
A4IG59481 WAS protein family homolo yes N/A 0.940 0.197 0.354 9e-06
Q28DN4472 WAS protein family homolo yes N/A 0.930 0.199 0.352 0.0002
A7Z063471 WAS protein family homolo yes N/A 0.534 0.114 0.45 0.0002
Q5U4A3472 WAS protein family homolo N/A N/A 0.930 0.199 0.352 0.0003
Q8VDD8475 WAS protein family homolo yes N/A 0.534 0.113 0.45 0.0003
Q5ZKA6476 WAS protein family homolo yes N/A 0.534 0.113 0.45 0.0008
>sp|Q7JW27|WASH1_DROME WAS protein family homolog 1 OS=Drosophila melanogaster GN=wash PE=1 SV=1 Back     alignment and function desciption
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 47/106 (44%), Positives = 57/106 (53%), Gaps = 8/106 (7%)

Query: 1   MQAIRTAGGTRKAKLRCVDATP--ESDNNMIVA--PPSGDLMSDLAAKLQLRRKGISGSH 56
           M AIR AGG    +LR   A P    DN+   A    +GDLM+DL  KL LRRKGISGS 
Sbjct: 396 MAAIRNAGGVHGGRLRSPAAAPLDVVDNSRSKAGGAVTGDLMADLHNKLMLRRKGISGSQ 455

Query: 57  NQMNENSTSSGNLMDKLLHNIPPPLAA--GSSESDHDDTDTEPDWD 100
           N +   +T+   LM +L   IPPP+    GS  SD    D E  W+
Sbjct: 456 NPV--EATAGNPLMQQLSRVIPPPVQPRKGSKSSDEHSEDDEDGWN 499




Acts as a nucleation-promoting factor by activating the Arp2/3 complex to induce actin polymerization. Participates in both linear- and branched-actin networks. Functions in linear-filament (bundled F-actin) by acting downstream of Rho1 and regulating actin and microtubule organization during oogenesis. Nucleates actin in an Arp2/3-dependent manner and exhibits F-actin and microtubule bundling and cross-linking activity in the egg chamber.
Drosophila melanogaster (taxid: 7227)
>sp|A4IG59|WASH1_DANRE WAS protein family homolog 1 OS=Danio rerio GN=Wash1 PE=2 SV=2 Back     alignment and function description
>sp|Q28DN4|WASH1_XENTR WAS protein family homolog 1 OS=Xenopus tropicalis GN=wash1 PE=2 SV=1 Back     alignment and function description
>sp|A7Z063|WASH1_BOVIN WAS protein family homolog 1 OS=Bos taurus GN=WASH1 PE=2 SV=1 Back     alignment and function description
>sp|Q5U4A3|WASH1_XENLA WAS protein family homolog 1 OS=Xenopus laevis GN=wash1 PE=2 SV=1 Back     alignment and function description
>sp|Q8VDD8|WASH1_MOUSE WAS protein family homolog 1 OS=Mus musculus GN=Wash1 PE=2 SV=1 Back     alignment and function description
>sp|Q5ZKA6|WASH1_CHICK WAS protein family homolog 1 OS=Gallus gallus GN=WASH1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query101
346466775153 hypothetical protein [Amblyomma maculatu 0.910 0.601 0.446 2e-09
194754144 503 GF12825 [Drosophila ananassae] gi|190620 0.960 0.192 0.439 4e-09
427792861 495 Putative was protein family log 2, parti 0.910 0.185 0.436 7e-09
427778755 213 Hypothetical protein [Rhipicephalus pulc 0.910 0.431 0.436 7e-09
380013101 513 PREDICTED: WAS protein family homolog 1- 0.900 0.177 0.415 8e-09
429892310 499 washout [Drosophila melanogaster] gi|429 0.970 0.196 0.443 9e-09
429892308 499 washout [Drosophila melanogaster] 0.970 0.196 0.443 9e-09
429892314 499 washout [Drosophila melanogaster] 0.970 0.196 0.443 1e-08
429892288 499 washout [Drosophila melanogaster] gi|429 0.970 0.196 0.443 1e-08
429892294 499 washout [Drosophila melanogaster] 0.970 0.196 0.443 1e-08
>gi|346466775|gb|AEO33232.1| hypothetical protein [Amblyomma maculatum] Back     alignment and taxonomy information
 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/103 (44%), Positives = 61/103 (59%), Gaps = 11/103 (10%)

Query: 1   MQAIRTAGGTRKAKLRCVDATPESDNNMIVAPPSGDLMSDLAAKLQLRRKGISGSHNQMN 60
           +++IR AGG  KA LR V   P+       APP GDLMSDL +KLQLRRKGISG  ++ +
Sbjct: 58  LESIRQAGG--KAGLRSV-RRPQQQRKQ-AAPPGGDLMSDLKSKLQLRRKGISGETDRAS 113

Query: 61  ENSTSS--GNLMDKLLHNIPPPLAAGSSESDHDDTDTEPDWDD 101
             + S+   + +D++L  IPPP       S    TDTE  W+D
Sbjct: 114 RPAPSAEVTSPLDRVLEMIPPPKVESEEAS---TTDTE--WND 151




Source: Amblyomma maculatum

Species: Amblyomma maculatum

Genus: Amblyomma

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194754144|ref|XP_001959357.1| GF12825 [Drosophila ananassae] gi|190620655|gb|EDV36179.1| GF12825 [Drosophila ananassae] Back     alignment and taxonomy information
>gi|427792861|gb|JAA61882.1| Putative was protein family log 2, partial [Rhipicephalus pulchellus] Back     alignment and taxonomy information
>gi|427778755|gb|JAA54829.1| Hypothetical protein [Rhipicephalus pulchellus] Back     alignment and taxonomy information
>gi|380013101|ref|XP_003690608.1| PREDICTED: WAS protein family homolog 1-like [Apis florea] Back     alignment and taxonomy information
>gi|429892310|gb|AGA18697.1| washout [Drosophila melanogaster] gi|429892316|gb|AGA18700.1| washout [Drosophila melanogaster] Back     alignment and taxonomy information
>gi|429892308|gb|AGA18696.1| washout [Drosophila melanogaster] Back     alignment and taxonomy information
>gi|429892314|gb|AGA18699.1| washout [Drosophila melanogaster] Back     alignment and taxonomy information
>gi|429892288|gb|AGA18686.1| washout [Drosophila melanogaster] gi|429892290|gb|AGA18687.1| washout [Drosophila melanogaster] gi|429892296|gb|AGA18690.1| washout [Drosophila melanogaster] gi|429892300|gb|AGA18692.1| washout [Drosophila melanogaster] gi|429892304|gb|AGA18694.1| washout [Drosophila melanogaster] Back     alignment and taxonomy information
>gi|429892294|gb|AGA18689.1| washout [Drosophila melanogaster] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query101
FB|FBgn0033692499 wash "washout" [Drosophila mel 0.782 0.158 0.470 1.4e-09
MGI|MGI:1916017475 Wash "WAS protein family homol 0.772 0.164 0.388 1.3e-06
UNIPROTKB|E2QXP1471 WASH1 "Uncharacterized protein 0.772 0.165 0.388 2.2e-06
RGD|1310196475 Wash "WAS protein family homol 0.772 0.164 0.388 2.2e-06
UNIPROTKB|F1LSU9475 Wash2 "Protein Wash2" [Rattus 0.772 0.164 0.388 2.2e-06
ZFIN|ZDB-GENE-050419-138481 wash "WAS protein family homol 0.782 0.164 0.393 2.2e-06
UNIPROTKB|F1LR35505 Wash2 "Protein Wash2" [Rattus 0.772 0.154 0.388 2.4e-06
UNIPROTKB|A7Z063471 WASH1 "WAS protein family homo 0.772 0.165 0.388 3.5e-06
UNIPROTKB|F1SK83469 WASH1 "Uncharacterized protein 0.772 0.166 0.388 7.4e-06
UNIPROTKB|F1NMK3476 WASH1 "WAS protein family homo 0.782 0.165 0.375 1.2e-05
FB|FBgn0033692 wash "washout" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 148 (57.2 bits), Expect = 1.4e-09, P = 1.4e-09
 Identities = 40/85 (47%), Positives = 49/85 (57%)

Query:     1 MQAIRTAGGTRKAKLRCVDATPES--DNNMIVA--PPSGDLMSDLAAKLQLRRKGISGSH 56
             M AIR AGG    +LR   A P    DN+   A    +GDLM+DL  KL LRRKGISGS 
Sbjct:   396 MAAIRNAGGVHGGRLRSPAAAPLDVVDNSRSKAGGAVTGDLMADLHNKLMLRRKGISGSQ 455

Query:    57 NQMNENSTSSGNLMDKLLHNIPPPL 81
             N +   +T+   LM +L   IPPP+
Sbjct:   456 NPVE--ATAGNPLMQQLSRVIPPPV 478




GO:0005667 "transcription factor complex" evidence=IPI
GO:0035277 "spiracle morphogenesis, open tracheal system" evidence=IMP
GO:0035210 "prepupal development" evidence=IMP
GO:0034314 "Arp2/3 complex-mediated actin nucleation" evidence=IDA
GO:0001578 "microtubule bundle formation" evidence=IDA
GO:0051020 "GTPase binding" evidence=IPI
GO:0005515 "protein binding" evidence=IPI
GO:0048477 "oogenesis" evidence=IMP
GO:0051017 "actin filament bundle assembly" evidence=IDA
GO:0051764 "actin crosslink formation" evidence=IDA
GO:0005634 "nucleus" evidence=IDA
GO:0005737 "cytoplasm" evidence=IDA
GO:0048471 "perinuclear region of cytoplasm" evidence=IDA
GO:0031941 "filamentous actin" evidence=IDA
MGI|MGI:1916017 Wash "WAS protein family homolog" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|E2QXP1 WASH1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
RGD|1310196 Wash "WAS protein family homolog" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1LSU9 Wash2 "Protein Wash2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-050419-138 wash "WAS protein family homolog" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1LR35 Wash2 "Protein Wash2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|A7Z063 WASH1 "WAS protein family homolog 1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1SK83 WASH1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|F1NMK3 WASH1 "WAS protein family homolog 1" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 101
KOG3671|consensus569 97.57
PHA03346520 US22 family homolog; Provisional 85.63
>KOG3671|consensus Back     alignment and domain information
Probab=97.57  E-value=8.5e-05  Score=64.92  Aligned_cols=46  Identities=30%  Similarity=0.415  Sum_probs=31.8

Q ss_pred             ChhHhhhCCCCccccccCcCCCCcccCcc---cCCCCCCHHHHHHHHHHHHhcc
Q psy1060           1 MQAIRTAGGTRKAKLRCVDATPESDNNMI---VAPPSGDLMSDLAAKLQLRRKG   51 (101)
Q Consensus         1 laaIR~AGGi~~~kLrkv~~~~~~~~~~~---~~~~gGdLM~dL~~kL~~RRkg   51 (101)
                      |+.|| +||    -||+|+++++..+++.   ....+|.|..+|.+.|+.|+-+
T Consensus       499 maqIR-qG~----~Lk~v~~~~~~~~~~s~s~~~a~~~~lagal~~~m~ara~a  547 (569)
T KOG3671|consen  499 MAQIR-QGG----QLKKVDSRKLGARRSSASPPAASPGGLAGALANLMDARASA  547 (569)
T ss_pred             HHHHH-hcc----cccccchhhhccccCCCCCCCCCCCccccHHHHHHHHHHHh
Confidence            78999 442    3478888876333332   1355789999999999999644



>PHA03346 US22 family homolog; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query101
2vcp_D93 N-WAsp, neural wiskott-aldrich syndrome protein; a 97.49
3lge_E31 Sorting nexin-9; complex, glycolysis, actin dynami 92.69
3m3n_W101 N-WAsp, neural wiskott-aldrich syndrome protein; a 80.42
>2vcp_D N-WAsp, neural wiskott-aldrich syndrome protein; actin-binding, transcription, muscle protein, nucleotide-binding, transcription regulation; HET: HIC ATP; 3.2A {Homo sapiens} Back     alignment and structure
Probab=97.49  E-value=7.8e-05  Score=50.12  Aligned_cols=46  Identities=28%  Similarity=0.455  Sum_probs=32.5

Q ss_pred             ChhHhhhCCCCccccccCcCCCCcccCcccCCCCCCHHHHHHHHHHHHhcccc
Q psy1060           1 MQAIRTAGGTRKAKLRCVDATPESDNNMIVAPPSGDLMSDLAAKLQLRRKGIS   53 (101)
Q Consensus         1 laaIR~AGGi~~~kLrkv~~~~~~~~~~~~~~~gGdLM~dL~~kL~~RRkgIS   53 (101)
                      |++||.  |+   .||+|.+.+.+ +.. .....++|+++|+.+|++||+.|.
T Consensus        47 L~~IR~--G~---~LKkv~~~~~~-~~~-~~~~~~gl~~aLa~aL~~R~~ai~   92 (93)
T 2vcp_D           47 LDQIRQ--GI---QLKSVADGQES-TPP-TPAPTSGIVGALMEVMQKRSKAIH   92 (93)
T ss_pred             HHHHHc--cc---ccCCCcccccc-cCC-CCCCcccHHHHHHHHHHHHHHHhc
Confidence            567886  32   57999877552 211 223457899999999999999883



>3lge_E Sorting nexin-9; complex, glycolysis, actin dynamics, LC4, hydrophobic pocket acetylation, lyase, phosphoprotein, schiff base; 2.20A {Oryctolagus cuniculus} Back     alignment and structure
>3m3n_W N-WAsp, neural wiskott-aldrich syndrome protein; actin dimer, ATP-binding, actin cytoskeleton, methylation, M protein, actin-binding, motor protein; HET: HIC ATP; 7.00A {Mus musculus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00