Psyllid ID: psy10641


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------
MIFVACLCVQMKILLGGYQARAQELLKQYKVLESQIDQCYVDLSTFSFLKTQEEASIPRRIASLTEDVNRQKEREAVLQERFGALDAQLKQLELGDS
cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
cEEEEEEEEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
MIFVACLCVQMKILLGGYQARAQELLKQYKVLESQIDQCYVDLSTFSFLKTQEEASIPRRIASLTEDVNRQKEREAVLQERFGALDAQLKQLELGDS
MIFVACLCVQMKILLGGYQARAQELLKQYKVLESQIDQCYVDLSTFSFLktqeeasiprriasltedvnRQKEREAVLQERFgaldaqlkqlelgds
MIFVACLCVQMKILLGGYQARAQELLKQYKVLESQIDQCYVDLSTFSFLKTQEEASIPRRIASLTEDVNRQKEREAVLQERFGALDAQLKQLELGDS
*IFVACLCVQMKILLGGYQARAQELLKQYKVLESQIDQCYVDLSTFSFLKT**********************************************
*IFVACLCVQMKILLGGYQARAQELLKQYKVLESQIDQCYVDLSTFSFLK*************LTEDVN****************************
MIFVACLCVQMKILLGGYQARAQELLKQYKVLESQIDQCYVDLSTFSFLKTQEEASIPRRIASLTEDVNRQKEREAVLQERFGALDAQLKQLELGDS
MIFVACLCVQMKILLGGYQARAQELLKQYKVLESQIDQCYVDLSTFSFLKTQEEASIPRRIASLTEDVNRQKEREAVLQERFGALDAQLKQL*****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooo
iiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MIFVACLCVQMKILxxxxxxxxxxxxxxxxxxxxxIDQCYVDLSTFSFLKTQEEASIPRRxxxxxxxxxxxxxxxxxxxxxFGALDAQLKQLELGDS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query97 2.2.26 [Sep-21-2011]
Q2KJC1802 Cell division cycle 5-lik yes N/A 0.845 0.102 0.524 1e-16
O08837802 Cell division cycle 5-lik yes N/A 0.845 0.102 0.524 2e-16
Q6A068802 Cell division cycle 5-lik yes N/A 0.845 0.102 0.512 3e-16
Q99459802 Cell division cycle 5-lik yes N/A 0.845 0.102 0.512 3e-16
A7SD85805 Cell division cycle 5-rel N/A N/A 0.752 0.090 0.479 1e-11
P0CO94838 Pre-mRNA-splicing factor yes N/A 0.814 0.094 0.360 8e-05
P0CO95833 Pre-mRNA-splicing factor N/A N/A 0.814 0.094 0.348 0.0002
>sp|Q2KJC1|CDC5L_BOVIN Cell division cycle 5-like protein OS=Bos taurus GN=CDC5L PE=2 SV=1 Back     alignment and function desciption
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 43/82 (52%), Positives = 56/82 (68%)

Query: 4   VACLCVQMKILLGGYQARAQELLKQYKVLESQIDQCYVDLSTFSFLKTQEEASIPRRIAS 63
            A +  +MKILLGGYQ+RA  L+KQ   L  QI+Q Y++L TF  LK  E+++IPRR+  
Sbjct: 710 AAKMEKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAYLELRTFEELKKHEDSAIPRRLEC 769

Query: 64  LTEDVNRQKEREAVLQERFGAL 85
           L EDV RQ+ERE  LQ R+  L
Sbjct: 770 LKEDVQRQQEREKELQHRYADL 791




DNA-binding protein involved in cell cycle control. May act as a transcription activator. Also seems to be involved in the second catalytic step of pre-mRNA splicing.
Bos taurus (taxid: 9913)
>sp|O08837|CDC5L_RAT Cell division cycle 5-like protein OS=Rattus norvegicus GN=Cdc5l PE=1 SV=2 Back     alignment and function description
>sp|Q6A068|CDC5L_MOUSE Cell division cycle 5-like protein OS=Mus musculus GN=Cdc5l PE=1 SV=2 Back     alignment and function description
>sp|Q99459|CDC5L_HUMAN Cell division cycle 5-like protein OS=Homo sapiens GN=CDC5L PE=1 SV=2 Back     alignment and function description
>sp|A7SD85|CDC5L_NEMVE Cell division cycle 5-related protein OS=Nematostella vectensis GN=cdc5l PE=3 SV=1 Back     alignment and function description
>sp|P0CO94|CEF1_CRYNJ Pre-mRNA-splicing factor CEF1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=CEF1 PE=3 SV=1 Back     alignment and function description
>sp|P0CO95|CEF1_CRYNB Pre-mRNA-splicing factor CEF1 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=CEF1 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query97
332025034 789 Cell division cycle 5-related protein [A 0.896 0.110 0.586 2e-19
242018620 787 cell division control protein, putative 0.938 0.115 0.538 2e-19
380020819 781 PREDICTED: cell division cycle 5-like pr 0.907 0.112 0.556 2e-19
66530332 781 PREDICTED: cell division cycle 5-like pr 0.907 0.112 0.556 2e-19
156550979 776 PREDICTED: cell division cycle 5-like pr 0.907 0.113 0.545 2e-19
350404897 780 PREDICTED: cell division cycle 5-like pr 0.907 0.112 0.556 3e-19
340713281 780 PREDICTED: cell division cycle 5-like pr 0.907 0.112 0.556 3e-19
383861592 780 PREDICTED: cell division cycle 5-like pr 0.907 0.112 0.545 7e-19
193582381 800 PREDICTED: cell division cycle 5-like pr 0.896 0.108 0.505 7e-19
357616344 796 cell division control protein [Danaus pl 0.886 0.108 0.523 1e-18
>gi|332025034|gb|EGI65221.1| Cell division cycle 5-related protein [Acromyrmex echinatior] Back     alignment and taxonomy information
 Score =  100 bits (248), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 51/87 (58%), Positives = 62/87 (71%)

Query: 10  QMKILLGGYQARAQELLKQYKVLESQIDQCYVDLSTFSFLKTQEEASIPRRIASLTEDVN 69
           ++K+L GGYQ RAQ L KQ   L  QI+Q +++LSTF FL+TQEEA+IPRRI  L EDVN
Sbjct: 700 KLKVLTGGYQTRAQVLTKQLHDLWEQIEQAHLELSTFKFLQTQEEAAIPRRINGLMEDVN 759

Query: 70  RQKEREAVLQERFGALDAQLKQLELGD 96
           RQ ERE  LQ R+  L  QL+Q  L D
Sbjct: 760 RQTERERSLQMRYAQLQDQLQQCRLND 786




Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242018620|ref|XP_002429772.1| cell division control protein, putative [Pediculus humanus corporis] gi|212514784|gb|EEB17034.1| cell division control protein, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|380020819|ref|XP_003694276.1| PREDICTED: cell division cycle 5-like protein [Apis florea] Back     alignment and taxonomy information
>gi|66530332|ref|XP_624906.1| PREDICTED: cell division cycle 5-like protein-like [Apis mellifera] Back     alignment and taxonomy information
>gi|156550979|ref|XP_001604289.1| PREDICTED: cell division cycle 5-like protein-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|350404897|ref|XP_003487253.1| PREDICTED: cell division cycle 5-like protein-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|340713281|ref|XP_003395173.1| PREDICTED: cell division cycle 5-like protein-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|383861592|ref|XP_003706269.1| PREDICTED: cell division cycle 5-like protein [Megachile rotundata] Back     alignment and taxonomy information
>gi|193582381|ref|XP_001951216.1| PREDICTED: cell division cycle 5-like protein-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|357616344|gb|EHJ70141.1| cell division control protein [Danaus plexippus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query97
UNIPROTKB|Q2KJC1802 CDC5L "Cell division cycle 5-l 0.783 0.094 0.552 3.6e-15
UNIPROTKB|E2RLP4802 CDC5L "Uncharacterized protein 0.783 0.094 0.552 3.6e-15
RGD|70892802 Cdc5l "cell division cycle 5-l 0.865 0.104 0.511 3.6e-15
UNIPROTKB|F1RQS5803 CDC5L "Uncharacterized protein 0.783 0.094 0.552 3.6e-15
MGI|MGI:1918952802 Cdc5l "cell division cycle 5-l 0.865 0.104 0.5 5.9e-15
UNIPROTKB|E1BWQ5806 CDC5L "Uncharacterized protein 0.752 0.090 0.561 5.9e-15
UNIPROTKB|E1C6A9807 CDC5L "Uncharacterized protein 0.752 0.090 0.561 5.9e-15
UNIPROTKB|Q99459802 CDC5L "Cell division cycle 5-l 0.783 0.094 0.539 1.2e-14
ZFIN|ZDB-GENE-040426-821801 cdc5l "CDC5 cell division cycl 0.783 0.094 0.552 2e-14
WB|WBGene00008386755 D1081.8 [Caenorhabditis elegan 0.907 0.116 0.307 5.7e-07
UNIPROTKB|Q2KJC1 CDC5L "Cell division cycle 5-like protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
 Score = 203 (76.5 bits), Expect = 3.6e-15, P = 3.6e-15
 Identities = 42/76 (55%), Positives = 54/76 (71%)

Query:    10 QMKILLGGYQARAQELLKQYKVLESQIDQCYVDLSTFSFLKTQEEASIPRRIASLTEDVN 69
             +MKILLGGYQ+RA  L+KQ   L  QI+Q Y++L TF  LK  E+++IPRR+  L EDV 
Sbjct:   716 KMKILLGGYQSRAMGLMKQLNDLWDQIEQAYLELRTFEELKKHEDSAIPRRLECLKEDVQ 775

Query:    70 RQKEREAVLQERFGAL 85
             RQ+ERE  LQ R+  L
Sbjct:   776 RQQEREKELQHRYADL 791




GO:0000974 "Prp19 complex" evidence=ISS
GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS
GO:0071987 "WD40-repeat domain binding" evidence=ISS
GO:0016607 "nuclear speck" evidence=IEA
GO:0005737 "cytoplasm" evidence=IEA
GO:0071013 "catalytic step 2 spliceosome" evidence=IEA
GO:0005730 "nucleolus" evidence=IEA
GO:0007049 "cell cycle" evidence=IEA
GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA
GO:0006351 "transcription, DNA-dependent" evidence=IEA
GO:0003723 "RNA binding" evidence=IEA
GO:0003677 "DNA binding" evidence=IEA
GO:0003682 "chromatin binding" evidence=IEA
UNIPROTKB|E2RLP4 CDC5L "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
RGD|70892 Cdc5l "cell division cycle 5-like" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1RQS5 CDC5L "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
MGI|MGI:1918952 Cdc5l "cell division cycle 5-like (S. pombe)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|E1BWQ5 CDC5L "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|E1C6A9 CDC5L "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|Q99459 CDC5L "Cell division cycle 5-like protein" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040426-821 cdc5l "CDC5 cell division cycle 5-like (S. pombe)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
WB|WBGene00008386 D1081.8 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q2KJC1CDC5L_BOVINNo assigned EC number0.52430.84530.1022yesN/A
O08837CDC5L_RATNo assigned EC number0.52430.84530.1022yesN/A
Q6A068CDC5L_MOUSENo assigned EC number0.51210.84530.1022yesN/A
Q99459CDC5L_HUMANNo assigned EC number0.51210.84530.1022yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 97
KOG0050|consensus617 99.62
PF05597132 Phasin: Poly(hydroxyalcanoate) granule associated 84.83
PF13851201 GAS: Growth-arrest specific micro-tubule binding 81.26
>KOG0050|consensus Back     alignment and domain information
Probab=99.62  E-value=8.3e-16  Score=127.13  Aligned_cols=70  Identities=39%  Similarity=0.550  Sum_probs=67.9

Q ss_pred             HHhHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhHHhhHHHHHHHHHHHHHHHHHH
Q psy10641          4 VACLCVQMKILLGGYQARAQELLKQYKVLESQIDQCYVDLSTFSFLKTQEEASIPRRIASLTEDVNRQKER   74 (97)
Q Consensus         4 a~KlEKKL~v~lgGYq~Ra~~L~kki~e~~~~le~a~~el~~F~~L~~~E~~Ai~rRle~L~eeV~~q~~R   74 (97)
                      |+|+||||++++||||+| .+|+++|+++|++|+.+.+++.||..|..+|..|+|+|+++|+++|.+|+.+
T Consensus       548 ~~klekKlk~~~~gyq~r-~~l~kq~~~~~~~le~~~~e~~~f~~l~~qE~~Al~~R~~~lq~ev~~q~~~  617 (617)
T KOG0050|consen  548 AEKLEKKLKHLLGGYQQR-EMLIKQIHHTLKALEEGQRELYTFEFLYRQEIRALPGRLERLQEEVNKQQEI  617 (617)
T ss_pred             HHHHHHHHHHHhhhHHHH-HHHHHHHHHHHHHHHHcchhhHHHHHHHHHHHHhhhhHHHHHHHHHHhhccC
Confidence            789999999999999999 9999999999999999999999999999999999999999999999998753



>PF05597 Phasin: Poly(hydroxyalcanoate) granule associated protein (phasin); InterPro: IPR008769 Polyhydroxyalkanoates (PHAs) are storage polyesters synthesised by various bacteria as intracellular carbon and energy reserve material Back     alignment and domain information
>PF13851 GAS: Growth-arrest specific micro-tubule binding Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00