Psyllid ID: psy10669

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------
Protein Sequence
MSSSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPTNNARFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIAGVKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNTGISLAAEIQAISGPKLVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPGQADL
Secondary Structure (PSIPRED)
cccccccccccccccHHHHHHHHHHHHHcccccEEEcccccccHHHHHHHccHHHHccccccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHcccEEEEccccHHHHHccccccccccccccHHHHHHHHccccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccEEEEcccccEEEEEEcccccccHHHHHHHHHHcccccccccccccccHHHHcccccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHcccccHHHHHHHHHHHHHHHHcEEcccccccccHHHHHHHccHHHHccccEEccEEcccccHHHHHHHHHHHHHHHHHHcccHHHccEEcccccHHHHHHHHHHHHccccccccEEEEEEccccccEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHcccEEHHHcccccEEEEEcHHHcccHHHHHHHHHHHcEEcEEcccEEEcccccccccccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHccccccccc
Coil and Loop (DISEMBL)
mssstmlhgtlaqtdPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLqnkyseglpgkryyggnqfIDEIEIVAQQRSLKafnldpeqwgcnvqpysgspanfavcekalptnnarfdflssgttcysrCLDYARFRQICDETDSIMFADMSHISGLIAGVKGVTKTGEKILYDYEEKInnavfpslqggphnhAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRknkltgskVELVLEEIAIACNKNTGISLAAEIQaisgpklvdfqtclhkNEDIVKKVAALKKEIEDYsnqfempgqadl
Flexible Loop (DISEMBL)
mssstmlhgtlaqtdPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPTNNARFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIAGVKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNTGISLAAEIQAISGPKLVDFQTCLHKNEDIVKKVAALKKEIEdysnqfempgqadl
Low Complexity Region (SEG)
MSSSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPTNNARFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIAGVKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNTGISLAAEIQAISGPKLVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPGQADL
Disordered region (IsUnstruct)
*****************LYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPTNNARFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIAGVKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQA*****************HLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNTGISLAAEIQAISGPKLVDFQTCLHKNEDIVKKVAALKK*****************
Disordered Region (DISOPRED)
**********LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPTNNARFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIAGVKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNTGISLAAEIQAISGPKLVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPGQ***
Disordered Region (DISEMBL)
********GTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPTNNARFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIAGVKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNTGISLAAEIQAISGPKLVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPGQADL
Disordered Region (DISPRO)
****TMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPTNNARFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIAGVKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNTGISLAAEIQAISGPKLVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPG****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSSSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPTNNARFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIAGVKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNTGISLAAEIQAISGPKLVDFQTCLHKxxxxxxxxxxxxxxxxxxxxxFEMPGQADL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	337	2.2.26 [Sep-21-2011]
P07511	484	Serine hydroxymethyltrans	yes	N/A	0.985	0.685	0.381	3e-76
P49357	517	Serine hydroxymethyltrans	N/A	N/A	0.967	0.630	0.358	4e-76
P50433	518	Serine hydroxymethyltrans	N/A	N/A	0.970	0.631	0.347	1e-74
P34899	518	Serine hydroxymethyltrans	N/A	N/A	0.970	0.631	0.350	1e-74
Q9SZJ5	517	Serine hydroxymethyltrans	no	N/A	0.970	0.632	0.345	2e-74
P49358	517	Serine hydroxymethyltrans	N/A	N/A	0.967	0.630	0.352	3e-73
Q6CLQ5	498	Serine hydroxymethyltrans	yes	N/A	0.833	0.564	0.392	1e-72
Q60V73	511	Serine hydroxymethyltrans	N/A	N/A	0.985	0.649	0.355	9e-72
P50432	507	Serine hydroxymethyltrans	yes	N/A	0.952	0.633	0.362	2e-71
Q758F0	497	Serine hydroxymethyltrans	yes	N/A	0.821	0.557	0.396	7e-70

>sp|P07511|GLYC_RABIT Serine hydroxymethyltransferase, cytosolic OS=Oryctolagus cuniculus GN=SHMT1 PE=1 SV=2

 Score =  285 bits (729), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 177/464 (38%), Positives = 233/464 (50%), Gaps = 132/464 (28%)

Query: 2   SSSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEG 61
           S   ML   L  +D E+Y +IKKE +RQ  G+ELIASENF S AVLE LGSCL NKYSEG
Sbjct: 17  SHEQMLAQPLKDSDAEVYDIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEG 76

Query: 62  LPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVC-------- 113
            PG+RYYGG + IDE+E + Q+R+L+A+ LDP+ WG NVQPYSGSPANFAV         
Sbjct: 77  YPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPYSGSPANFAVYTALVEPHG 136

Query: 114 --------------------EKALPTNNARFDFLS------SGTTCYSRCLDYAR----- 142
                               +K +   +  F+ ++      +G   Y R  + AR     
Sbjct: 137 RIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDTGYIDYDRLEENARLFHPK 196

Query: 143 -----------------FRQICDETDSIMFADMSHISGLIA------------------- 166
                             R+I DE  + + ADM+HISGL+                    
Sbjct: 197 LIIAGTSCYSRNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFEHCHVVTTTTH 256

Query: 167 ---------------GVKGV-TKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAM 210
                          GV+ V  KTG++ILY+ E  IN+AVFP LQGGPHNHAI  +A A+
Sbjct: 257 KTLRGCRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVAL 316

Query: 211 LQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELV 270
            QA + EFK YQ QV AN   LS  +++ GY +VTGG+D HLIL+DLR     G + E V
Sbjct: 317 KQAMTPEFKEYQRQVVANCRALSAALVELGYKIVTGGSDNHLILVDLRSKGTDGGRAEKV 376

Query: 271 LEEIAIACNKNT---------------------------------------GISLAAEIQ 291
           LE  +IACNKNT                                       GI L  +IQ
Sbjct: 377 LEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIELTVQIQ 436

Query: 292 AISGPK--LVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPG 333
             +GP+  L +F+  L  +E   + V AL++E+E ++  F +PG
Sbjct: 437 DDTGPRATLKEFKEKLAGDEKHQRAVRALRQEVESFAALFPLPG 480

Interconversion of serine and glycine.
Oryctolagus cuniculus (taxid: 9986)
EC: 2EC: .EC: 1EC: .EC: 2EC: .EC: 1

>sp|P49357|GLYM_FLAPR Serine hydroxymethyltransferase 1, mitochondrial OS=Flaveria pringlei PE=2 SV=1

 Score =  285 bits (728), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 164/457 (35%), Positives = 230/457 (50%), Gaps = 131/457 (28%)

Query: 7   LHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKR 66
           L+  L   DPE+  +I+ EK RQ  G+ELI SENFTSL+V++ +GS + NKYSEG PG R
Sbjct: 52  LNAPLEVVDPEIADIIELEKARQWKGLELIPSENFTSLSVMQAVGSVMTNKYSEGYPGAR 111

Query: 67  YYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL--------- 117
           YYGGN++ID  E + Q+R+L+AF LDP +WG NVQP SGSPANF V    L         
Sbjct: 112 YYGGNEYIDMAETLCQKRALEAFRLDPAKWGVNVQPLSGSPANFHVYTALLKAHDRIMAL 171

Query: 118 -----------------------------------PTNNARFDFLSSGTTCY-------- 134
                                               T    +D L    T +        
Sbjct: 172 DLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 231

Query: 135 ----SRCLDYARFRQICDETDSIMFADMSHISGLIA------------------------ 166
               +R  DYAR R++CD+  +IM ADM+HISGL+A                        
Sbjct: 232 ASAYARLYDYARIRKVCDKQKAIMLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRG 291

Query: 167 ----------GVKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSD 216
                     G+K V K G+++ YDYE+KIN AVFP LQGGPHNH I  +A A+ QA + 
Sbjct: 292 PRGAMIFFRKGLKEVNKQGKEVFYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTA 351

Query: 217 EFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAI 276
           E+K+YQ QV +N++  ++ ++K GY +V+GGT+ HL+L++L+   + GSKVE VLE + I
Sbjct: 352 EYKAYQEQVMSNSAKFAETLVKSGYELVSGGTENHLVLVNLKNKGIDGSKVEKVLEAVHI 411

Query: 277 ACNKNT---------------------------------------GISLAAEIQA-ISGP 296
           A NKNT                                        + LA +I+    G 
Sbjct: 412 AANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDLAVKLAVKIKGEAKGT 471

Query: 297 KLVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPG 333
           KL DF T + ++  I  +++ L+ ++E+Y+ QF   G
Sbjct: 472 KLKDFVTAM-ESSAIQSEISKLRHDVEEYAKQFPTIG 507

Interconversion of serine and glycine.

Flaveria pringlei (taxid: 4226)

EC: 2

EC: .

EC: 1

EC: .

EC: 2

EC: .

EC: 1

>sp|P50433|GLYM_SOLTU Serine hydroxymethyltransferase, mitochondrial OS=Solanum tuberosum PE=2 SV=1

 Score =  280 bits (716), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 159/457 (34%), Positives = 227/457 (49%), Gaps = 130/457 (28%)

Query: 7   LHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKR 66
           L+  L   DPE+  +I+ EK RQ  G+ELI SENFTS++V++ +GS + NKYSEG PG R
Sbjct: 52  LNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGAR 111

Query: 67  YYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL--------- 117
           YYGGN++ID  E + Q+R+L+AF LDP +WG NVQP SGSPANF V    L         
Sbjct: 112 YYGGNEYIDMAETLCQKRALEAFRLDPAKWGVNVQPLSGSPANFQVYTALLKPHERIMAL 171

Query: 118 -----------------------------------PTNNARFDFLSSGTTCY-------- 134
                                               T    +D L    T +        
Sbjct: 172 DLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAG 231

Query: 135 ----SRCLDYARFRQICDETDSIMFADMSHISGLIA------------------------ 166
               +R  DY R R++C++  +I+ ADM+HISGL+A                        
Sbjct: 232 ASAYARLYDYDRIRKVCNKQKAILLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRG 291

Query: 167 ----------GVKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSD 216
                     GVK V K G+++ YDYE+KIN AVFP LQGGPHNH I  +A A+ QA + 
Sbjct: 292 PRGAMIFYRKGVKEVNKQGKEVFYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTP 351

Query: 217 EFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAI 276
           E+++YQ QV +N+S  +  + ++GY +V+GGTD HL+L++++   + GS+VE VLE + I
Sbjct: 352 EYRAYQEQVLSNSSKFAQALGEKGYELVSGGTDNHLVLVNMKNKGIDGSRVEKVLEAVHI 411

Query: 277 ACNKNT---------------------------------------GISLAAEIQA-ISGP 296
           A NKNT                                        + +A +++A   G 
Sbjct: 412 AANKNTVPGDVSAMVPGGIRMGTPALTSRGFLEEDFVKVADFFDAAVKIAVKVKAETQGT 471

Query: 297 KLVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPG 333
           KL DF   L  +  I  ++A L+ ++E+Y+ QF   G
Sbjct: 472 KLKDFVATLESSAPIKSEIAKLRHDVEEYAKQFPTIG 508

Interconversion of serine and glycine.

Solanum tuberosum (taxid: 4113)

EC: 2

EC: .

EC: 1

EC: .

EC: 2

EC: .

EC: 1

>sp|P34899|GLYM_PEA Serine hydroxymethyltransferase, mitochondrial OS=Pisum sativum PE=1 SV=1

 Score =  280 bits (715), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 160/457 (35%), Positives = 230/457 (50%), Gaps = 130/457 (28%)

Query: 7   LHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKR 66
           L+  L   DPE+  +I+ EK RQ  G+ELI SENFTSL+V++ +GS + NKYSEG PG R
Sbjct: 52  LNSPLEVIDPEIADIIELEKARQWKGLELIPSENFTSLSVMQAVGSVMTNKYSEGYPGAR 111

Query: 67  YYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL--------- 117
           YYGGN++ID  E + Q+R+L+AF LDP +WG NVQP SGSP+NF V    L         
Sbjct: 112 YYGGNEYIDMAETLCQKRALEAFRLDPAKWGVNVQPLSGSPSNFQVYTALLKPHDRIMAL 171

Query: 118 -----------------------------------PTNNARFDFLSSGTTCY-------- 134
                                               T    +D L    T +        
Sbjct: 172 DLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAG 231

Query: 135 ----SRCLDYARFRQICDETDSIMFADMSHISGLIA------------------------ 166
               +R  DYAR R++CD+  +++ ADM+HISGL+A                        
Sbjct: 232 ASAYARLYDYARIRKVCDKQKAVLLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRG 291

Query: 167 ----------GVKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSD 216
                     G+K V K G+++ YDYE+KIN AVFP LQGGPHNH I  +A A+ QA + 
Sbjct: 292 PRGAMIFFRKGLKEVNKQGKEVFYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTP 351

Query: 217 EFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAI 276
           E+++YQ QV +N+S  +  + ++GY +V+GGT+ HL+L++L+   + GS+VE VLE + I
Sbjct: 352 EYRAYQEQVLSNSSKFAKALSEKGYDLVSGGTENHLVLVNLKNKGIDGSRVEKVLELVHI 411

Query: 277 ACNKNT---------------------------------------GISLAAEIQAIS-GP 296
           A NKNT                                        +SLA +++A S G 
Sbjct: 412 AANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDAAVSLALKVKAESKGT 471

Query: 297 KLVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPG 333
           KL DF   L  +  +  +++ LK ++E+++ QF   G
Sbjct: 472 KLKDFVEALQTSSYVQSEISKLKHDVEEFAKQFPTIG 508

Interconversion of serine and glycine.

Pisum sativum (taxid: 3888)

EC: 2

EC: .

EC: 1

EC: .

EC: 2

EC: .

EC: 1

>sp|Q9SZJ5|GLYM_ARATH Serine hydroxymethyltransferase, mitochondrial OS=Arabidopsis thaliana GN=SHM1 PE=1 SV=1

 Score =  279 bits (714), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 158/457 (34%), Positives = 232/457 (50%), Gaps = 130/457 (28%)

Query: 7   LHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKR 66
           L+  L + DPE+  +I+ EK RQ  G+ELI SENFTS++V++ +GS + NKYSEG PG R
Sbjct: 51  LNAPLEEVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGAR 110

Query: 67  YYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL--------- 117
           YYGGN++ID  E + Q+R+L+AF LDPE+WG NVQP SGSPANF V    L         
Sbjct: 111 YYGGNEYIDMAETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFHVYTALLKPHERIMAL 170

Query: 118 -----------------------------------PTNNARFDFLSSGTTCYSRCL---- 138
                                               T    +D +    T +   L    
Sbjct: 171 DLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQMEKSATLFRPKLIVAG 230

Query: 139 --DYARF------RQICDETDSIMFADMSHISGLIA------------------------ 166
              YAR       R++C++  ++M ADM+HISGL+A                        
Sbjct: 231 ASAYARLYDYARIRKVCNKQKAVMLADMAHISGLVAANVIPSPFDYADVVTTTTHKSLRG 290

Query: 167 ----------GVKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSD 216
                     GVK + K G+++LYD+E+KIN AVFP LQGGPHNH I  +A A+ QA + 
Sbjct: 291 PRGAMIFFRKGVKEINKQGKEVLYDFEDKINQAVFPGLQGGPHNHTITGLAVALKQATTS 350

Query: 217 EFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAI 276
           E+K+YQ QV +N++  +  +++RGY +V+GGTD HL+L++L+   + GS+VE VLE + I
Sbjct: 351 EYKAYQEQVLSNSAKFAQTLMERGYELVSGGTDNHLVLVNLKPKGIDGSRVEKVLEAVHI 410

Query: 277 ACNKNT---------------------------------------GISLAAEIQA-ISGP 296
           A NKNT                                        +++A ++++   G 
Sbjct: 411 ASNKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAEYFDKAVTIALKVKSEAQGT 470

Query: 297 KLVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPG 333
           KL DF + +  +  I  ++A L+ E+E+++ QF   G
Sbjct: 471 KLKDFVSAMESSSTIQSEIAKLRHEVEEFAKQFPTIG 507

Interconversion of serine and glycine.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 1

EC: .

EC: 2

EC: .

EC: 1

>sp|P49358|GLYN_FLAPR Serine hydroxymethyltransferase 2, mitochondrial OS=Flaveria pringlei PE=2 SV=1

 Score =  275 bits (703), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 161/457 (35%), Positives = 227/457 (49%), Gaps = 131/457 (28%)

Query: 7   LHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKR 66
           L+  L   DPE+  +I+ EK RQ  G+ELI SENFTSL+V++ +GS + NKYSEG PG R
Sbjct: 52  LNAPLEVGDPEIADIIELEKARQWKGLELILSENFTSLSVMQAVGSVMTNKYSEGYPGAR 111

Query: 67  YYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL--------- 117
           YYGGN++ID  E + Q+R+L+AF LD  +WG NVQP SGSPANF V    L         
Sbjct: 112 YYGGNEYIDMAETLCQKRALEAFRLDAAKWGVNVQPLSGSPANFHVYTALLKAHDRIMAL 171

Query: 118 -----------------------------------PTNNARFDFLSSGTTCY-------- 134
                                               T    +D L    T +        
Sbjct: 172 DLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAG 231

Query: 135 ----SRCLDYARFRQICDETDSIMFADMSHISGLIA------------------------ 166
               +R  DYAR R++CD+  +I+ ADM+HISGL+A                        
Sbjct: 232 ASAYARLYDYARIRKVCDKQKAILLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRG 291

Query: 167 ----------GVKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSD 216
                     GVK V K G+++LYDYE+KIN AVFP LQGGPHNH I  +A A+ QA + 
Sbjct: 292 PRGAMIFFRKGVKEVNKQGKEVLYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTA 351

Query: 217 EFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAI 276
           E+K+YQ QV +N +  ++ ++K GY +V+GGT+ HL+L++L+   + GS+VE VLE + I
Sbjct: 352 EYKAYQEQVMSNCAKFAETLVKSGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHI 411

Query: 277 ACNKNT---------------------------------------GISLAAEIQA-ISGP 296
           A NKNT                                        + LA +I+    G 
Sbjct: 412 AANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYLFDLAVKLAVKIKGEAQGT 471

Query: 297 KLVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPG 333
           KL DF   + ++     +++ L+ ++E+Y+ QF   G
Sbjct: 472 KLKDFVAAM-QSSAFQSEISKLRHDVEEYAKQFPTIG 507

Interconversion of serine and glycine.

Flaveria pringlei (taxid: 4226)

EC: 2

EC: .

EC: 1

EC: .

EC: 2

EC: .

EC: 1

>sp|Q6CLQ5|GLYM_KLULA Serine hydroxymethyltransferase, mitochondrial OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=SHM1 PE=3 SV=1

 Score =  273 bits (699), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 146/372 (39%), Positives = 203/372 (54%), Gaps = 91/372 (24%)

Query: 2   SSSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEG 61
           ++  M+   +   DPE+Y ++ KE+ RQ + I LI SENFTS +V++ LGS +QNKYSEG
Sbjct: 32  ANQVMVSKHVQDIDPEMYDILTKERKRQKHSITLIPSENFTSKSVMDLLGSEMQNKYSEG 91

Query: 62  LPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPTNN 121
            PG+RYYGGNQFID  E + Q+R+L+ +NLDP+ WG NVQP SG+PAN       + TN+
Sbjct: 92  YPGERYYGGNQFIDMAESLCQKRALELYNLDPQLWGVNVQPLSGAPANLYAYSAVMETND 151

Query: 122 A---------------------------------------------RFDFLS-------- 128
                                                          +DFLS        
Sbjct: 152 RLMGLDLPHGGHLSHGYQLPSGTKISYISKYFQTMPYHVDSQTGIIDYDFLSKTSKLFRP 211

Query: 129 ----SGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA------------------ 166
               +G + YSR LDY RF++I D   + + +DM+HISGL+A                  
Sbjct: 212 KVIVAGASAYSRVLDYKRFKEIADACGAYLMSDMAHISGLVAAGVTRSPFEYSDIVTTTT 271

Query: 167 ----------------GVKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAM 210
                           GV+ VTK G+++LYD +++IN +VFP  QGGPHNH I A+A A+
Sbjct: 272 HKSLRGPRGAMIFYRKGVRKVTKKGKEVLYDLDKRINFSVFPGHQGGPHNHTISALAVAL 331

Query: 211 LQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELV 270
            QA + EFK YQA V  NA    +E++K+G+ +V+GGTD HLILI+L    + G+++E +
Sbjct: 332 KQAATPEFKEYQAAVVENARIFGEELVKKGFELVSGGTDTHLILINLSNLGIDGARLETL 391

Query: 271 LEEIAIACNKNT 282
           LE I IA NKNT
Sbjct: 392 LENINIAANKNT 403

Interconversion of serine and glycine.

Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (taxid: 284590)

EC: 2

EC: .

EC: 1

EC: .

EC: 2

EC: .

EC: 1

>sp|Q60V73|GLYC_CAEBR Serine hydroxymethyltransferase OS=Caenorhabditis briggsae GN=mel-32 PE=3 SV=3

 Score =  270 bits (691), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 164/461 (35%), Positives = 228/461 (49%), Gaps = 129/461 (27%)

Query: 2   SSSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEG 61
           ++  +L   + + DPE+++++K EK RQ  G+ELIASENFTS AV++ LGS + NKYSEG
Sbjct: 47  NNENLLKDHVEKIDPEVFNIMKNEKSRQRRGLELIASENFTSKAVMDALGSAMCNKYSEG 106

Query: 62  LPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPTN- 120
            PG RYYGGN+FID++EI+ Q+R+L+ F LDP +WG NVQ  SGSPANFAV    +  N 
Sbjct: 107 YPGARYYGGNEFIDQMEILCQKRALEVFGLDPAKWGVNVQSLSGSPANFAVYTALVGANG 166

Query: 121 ------------------------NARFDFL---------SSGTTCYSRCLD-------- 139
                                   +A  +F           SG   Y +  +        
Sbjct: 167 RIMGLDLPDGGHLTHGFFTPARKVSATSEFFQSMPYKVDAQSGLIDYDKLEENAMLFRPK 226

Query: 140 --------YAR------FRQICDETDSIMFADMSHISGLIA------------------- 166
                   YAR      FR+I  +  + + +DM+HISGL+A                   
Sbjct: 227 VLIAGVSCYARHLDYERFRKIATKAGAYLMSDMAHISGLVAAGLIPSPFEYSDVVTTTTH 286

Query: 167 ---------------GVKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAML 211
                          GV+ V   G + LYD EEKIN+AVFP LQGGPHNH I  IA A+ 
Sbjct: 287 KSLRGPRGAMIFYRKGVRSVNAKGVETLYDLEEKINSAVFPGLQGGPHNHTIAGIAVALK 346

Query: 212 QAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVL 271
           Q  S++F  Y  Q+  NA  L++ + K GY + TGGTD HL+L+DLR   + G++ E +L
Sbjct: 347 QCLSEDFVQYGEQILKNAKTLAERLKKHGYSLATGGTDNHLLLVDLRPIGVEGARAEHIL 406

Query: 272 EEIAIACNKNT---------------------------------------GISLAAEIQA 292
           +   IACNKNT                                       G+ +A +  A
Sbjct: 407 DLAHIACNKNTCPGDVSALRPGGIRLGTPALTSRGFKEQDFEKVGDFIHEGVQIAKKYNA 466

Query: 293 ISGPKLVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPG 333
            +G  L DF+     NE   ++VA L K +E++S +FE+PG
Sbjct: 467 EAGKTLKDFKAFTATNEQFKQEVAELAKRVEEFSGKFEIPG 507

Interconversion of serine and glycine.

Caenorhabditis briggsae (taxid: 6238)

EC: 2

EC: .

EC: 1

EC: .

EC: 2

EC: .

EC: 1

>sp|P50432|GLYC_CAEEL Serine hydroxymethyltransferase OS=Caenorhabditis elegans GN=mel-32 PE=1 SV=2

 Score =  269 bits (688), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 163/450 (36%), Positives = 217/450 (48%), Gaps = 129/450 (28%)

Query: 13  QTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQ 72
           + DPE++ ++K EK RQ  G+ELIASENFTS AV++ LGS + NKYSEG PG RYYGGN+
Sbjct: 54  KVDPEVFDIMKNEKKRQRRGLELIASENFTSKAVMDALGSAMCNKYSEGYPGARYYGGNE 113

Query: 73  FIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPTNN----------- 121
           FID++E++ Q+R+L+ F LDP +WG NVQP SGSPANFAV    + +N            
Sbjct: 114 FIDQMELLCQKRALEVFGLDPAKWGVNVQPLSGSPANFAVYTAIVGSNGRIMGLDLPDGG 173

Query: 122 ---------AR--------FDFLSSGTTCYSRCLDYARFRQ------------------- 145
                    AR        F  L       +  +DY +  Q                   
Sbjct: 174 HLTHGFFTPARKVSATSEFFQSLPYKVDPTTGLIDYDKLEQNAMLFRPKAIIAGVSCYAR 233

Query: 146 ---------ICDETDSIMFADMSHISGLIA------------------------------ 166
                    I  +  + + +DM+HISGL+A                              
Sbjct: 234 HLDYERFRKIATKAGAYLMSDMAHISGLVAAGLIPSPFEYSDVVTTTTHKSLRGPRGALI 293

Query: 167 ----GVKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQ 222
               GV+     G   LYD EEKIN+AVFP LQGGPHNH I  IA A+ Q  S++F  Y 
Sbjct: 294 FYRKGVRSTNAKGVDTLYDLEEKINSAVFPGLQGGPHNHTIAGIAVALRQCLSEDFVQYG 353

Query: 223 AQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
            QV  NA  L++ M K GY + TGGTD HL+L+DLR   + G++ E VL+   IACNKNT
Sbjct: 354 EQVLKNAKTLAERMKKHGYALATGGTDNHLLLVDLRPIGVEGARAEHVLDLAHIACNKNT 413

Query: 283 ---------------------------------------GISLAAEIQAISGPKLVDFQT 303
                                                  G+ +A +  A +G  L DF++
Sbjct: 414 CPGDVSALRPGGIRLGTPALTSRGFQEQDFEKVGDFIHEGVQIAKKYNAEAGKTLKDFKS 473

Query: 304 CLHKNEDIVKKVAALKKEIEDYSNQFEMPG 333
               NE   K VA L K +E++S +FE+PG
Sbjct: 474 FTETNEPFKKDVADLAKRVEEFSTKFEIPG 503

Interconversion of serine and glycine.

Caenorhabditis elegans (taxid: 6239)

EC: 2

EC: .

EC: 1

EC: .

EC: 2

EC: .

EC: 1

>sp|Q758F0|GLYM_ASHGO Serine hydroxymethyltransferase, mitochondrial OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SHM1 PE=3 SV=1

 Score =  264 bits (675), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 146/368 (39%), Positives = 200/368 (54%), Gaps = 91/368 (24%)

Query: 6   MLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGK 65
           ML   + + DPE+Y ++ KE+ RQ   I LI SENFTS+AV+  LGS +QNKYSEG PG+
Sbjct: 35  MLSQHVQEFDPEMYDILTKERSRQKRSITLIPSENFTSVAVMNLLGSEMQNKYSEGYPGQ 94

Query: 66  RYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANF----AVCEKA----- 116
           RYYGGNQ+ID  E + Q+R+L+ + LDP +WG NVQ  SG+PAN     A+ E       
Sbjct: 95  RYYGGNQYIDMAESLCQKRALELYGLDPAKWGVNVQSLSGAPANLYAYSAIMEVGDRMMG 154

Query: 117 --LP----------------------------------TNNARFDFLS------------ 128
             LP                                  T    +D LS            
Sbjct: 155 LDLPHGGHLSHGYQLQNGNKISYISKYFQTMAYRVDPATGLVDYDTLSETSKLFRPKVIV 214

Query: 129 SGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA---------------------- 166
           +GT+ Y+R LDY RFR+I D   + + +DM+H+SGL+A                      
Sbjct: 215 AGTSAYARVLDYKRFREIADACGAYLLSDMAHVSGLVAAGVHPSPFEYSDIVTTTTHKSL 274

Query: 167 ------------GVKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQ 214
                       G++ VTK G +I+YD +++IN +VFP+ QGGPHNH I A+A A+ QA 
Sbjct: 275 RGPRGAMIFYRKGIRKVTKKGTEIMYDLDKRINFSVFPAHQGGPHNHTISALAVALKQAA 334

Query: 215 SDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEI 274
           + EFK+YQ  V  NA    +E+ KRG+ +V+GGTD HL+LIDL    + GS++E +LE +
Sbjct: 335 TPEFKNYQTAVVENAKVFGEELSKRGFSLVSGGTDTHLLLIDLSPMGIDGSRLETILERL 394

Query: 275 AIACNKNT 282
            IA NKNT
Sbjct: 395 NIAANKNT 402

Interconversion of serine and glycine.

Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) (taxid: 284811)

EC: 2

EC: .

EC: 1

EC: .

EC: 2

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	337
170052865	467	serine hydroxymethyltransferase [Culex q	0.982	0.708	0.432	1e-99
332030783	527	Serine hydroxymethyltransferase [Acromyr	0.988	0.631	0.435	2e-98
350398039	520	PREDICTED: serine hydroxymethyltransfera	0.973	0.630	0.420	1e-97
307206360	464	Serine hydroxymethyltransferase [Harpegn	0.979	0.711	0.424	4e-97
229577327	490	serine hydroxymethyltransferase 1 (solub	0.985	0.677	0.429	3e-96
157129675	475	serine hydroxymethyltransferase [Aedes a	0.982	0.696	0.415	5e-96
322794373	479	hypothetical protein SINV_09632 [Solenop	0.979	0.688	0.417	5e-96
24640005	537	CG3011, isoform A [Drosophila melanogast	0.988	0.620	0.416	2e-94
383865329	464	PREDICTED: serine hydroxymethyltransfera	0.973	0.706	0.417	6e-94
357624950	465	serine hydroxymethyltransferase [Danaus	0.970	0.703	0.425	4e-92

>gi|170052865|ref|XP_001862416.1| serine hydroxymethyltransferase [Culex quinquefasciatus] gi|167873638|gb|EDS37021.1| serine hydroxymethyltransferase [Culex quinquefasciatus]

 Score =  369 bits (947), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 199/460 (43%), Positives = 254/460 (55%), Gaps = 129/460 (28%)

Query: 3   SSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGL 62
           ++ +LH  L Q DPEL  L++KEK RQI G+E+IASENFTSL+VL+CL SCL NKYSEGL
Sbjct: 4   NAKLLHENLWQADPELMDLVRKEKKRQIQGLEMIASENFTSLSVLQCLSSCLHNKYSEGL 63

Query: 63  PGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV---------- 112
           PG+RYYGGN++IDEIE++AQ+R+L+A+ L+PE+WGCNVQPYSGSPANFAV          
Sbjct: 64  PGQRYYGGNEYIDEIELLAQKRALEAYRLNPEEWGCNVQPYSGSPANFAVYTGLIEPHGR 123

Query: 113 ------------------CEKALPTNNARFDFLSSGTTCYSRCLDYARF----------- 143
                               K +   +  F+ +       +  +DY +            
Sbjct: 124 IMGLDLPDGGHLTHGFMTATKKISATSIFFESMPYKVDPVTGLIDYDKLEESARIFKPKI 183

Query: 144 -----------------RQICDETDSIMFADMSHISGLIA-------------------- 166
                            RQI D   + MFADM+HISGL+A                    
Sbjct: 184 IIAGISCYSRCLDYKRFRQIADANGAYMFADMAHISGLVAAGVIPSPFEFADVVSTTTHK 243

Query: 167 --------------GVKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQ 212
                         GV+ V   GEK+LYD E KIN AVFP LQGGPHNHAI  IAT MLQ
Sbjct: 244 SLRGPRAGVIFYRKGVRSVKANGEKVLYDLESKINQAVFPGLQGGPHNHAIAGIATCMLQ 303

Query: 213 AQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLE 272
           AQ+ EFK YQ Q+  NA  L D ++++GY + TGGTDVHL+L+DLR   +TG++ E VLE
Sbjct: 304 AQTPEFKEYQVQIIKNARALCDGLLQKGYTISTGGTDVHLVLVDLRPVGITGARAEYVLE 363

Query: 273 EIAIACNKNT---------------------------------------GISLAAEIQAI 293
           EI+IACNKNT                                       G+ L+ EI A+
Sbjct: 364 EISIACNKNTVPGDKSALNPSGIRLGTPALTTRGLTESDMARVVDFIDRGLQLSKEITAV 423

Query: 294 SGPKLVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPG 333
           SGPKL DF+  LH++  +  KV ALKKE++DYS +F MPG
Sbjct: 424 SGPKLADFKRVLHEDPKLNGKVQALKKEVQDYSEKFPMPG 463

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332030783|gb|EGI70459.1| Serine hydroxymethyltransferase [Acromyrmex echinatior]

 Score =  365 bits (937), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 201/462 (43%), Positives = 260/462 (56%), Gaps = 129/462 (27%)

Query: 2   SSSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEG 61
           S + +L+  + ++DPEL+ LIKKEK RQ  G+ELIASENFTSL+VL+C+ SCL NKYSEG
Sbjct: 63  SMAAILNKNIWESDPELFDLIKKEKKRQEAGLELIASENFTSLSVLQCMSSCLHNKYSEG 122

Query: 62  LPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV--------- 112
           LPG+RYYGGN+F+DEIE++AQ+R+L+AFNLDPEQWGCNVQPYSGSPANFAV         
Sbjct: 123 LPGQRYYGGNEFVDEIELLAQKRALEAFNLDPEQWGCNVQPYSGSPANFAVYTGLLEPHG 182

Query: 113 -------------------CEKALPTNNARFDFL------SSGTTCYSRCLDYAR----- 142
                                K +   +  F+ +      +SG   Y    + AR     
Sbjct: 183 RIMGLNLPDGGHLTHGFFTANKKISATSIFFESMPYKVDPASGLIDYDELANNARLFKPK 242

Query: 143 -----------------FRQICDETDSIMFADMSHISGLIA------------------- 166
                            FR+I DE D+ +F+DM+HISGL+A                   
Sbjct: 243 VIIAGVSCYSRCLNYKCFREIADENDAYLFSDMAHISGLVATGLISSPFEYSDVVSTTTH 302

Query: 167 ---------------GVKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAML 211
                          GV+ VTK G+KI+YD E KIN AVFP LQGGPHNHAI  IATAM 
Sbjct: 303 KTLRGPRAGVIFFRKGVRSVTKDGKKIMYDIESKINQAVFPGLQGGPHNHAIAGIATAMK 362

Query: 212 QAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVL 271
           Q ++ EF  YQ Q+  NA  L   + +RGY + T GTDVH++L+DLR + +TGSK E +L
Sbjct: 363 QVKTPEFLEYQKQIVINAKRLCTGLQERGYKISTNGTDVHMLLVDLRPSGITGSKAEKIL 422

Query: 272 EEIAIACNKNT---------------------------------------GISLAAEIQA 292
           E+I+IACNKNT                                       G+ L+ E+ A
Sbjct: 423 EDISIACNKNTVPGDKSALNPSGIRLGTPAVTTRGLVEKDIDKVVDFIDRGLKLSKEVTA 482

Query: 293 ISGPKLVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPGQ 334
           ISGPKLVDF+  L  +E+I  K+AALK+E+E +S QF +PG 
Sbjct: 483 ISGPKLVDFKRVLSTDENIKTKIAALKEEVEIFSKQFSIPGH 524

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350398039|ref|XP_003485067.1| PREDICTED: serine hydroxymethyltransferase, cytosolic-like [Bombus impatiens]

 Score =  362 bits (930), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 192/457 (42%), Positives = 261/457 (57%), Gaps = 129/457 (28%)

Query: 6   MLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGK 65
           +++  + +TDPEL+ L+KKEK RQ +G+E+IASENFTSL+VL+CL SCL NKYSEGLPG+
Sbjct: 60  IIYKNVWETDPELFELMKKEKKRQESGLEMIASENFTSLSVLQCLSSCLHNKYSEGLPGQ 119

Query: 66  RYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPAN---------------- 109
           RYYGGN++IDEIE++AQ+R+L+AF+L+PE+WGCNVQPYSGSPAN                
Sbjct: 120 RYYGGNEYIDEIELLAQKRALEAFDLNPEEWGCNVQPYSGSPANFAVYTGLIEPHGRIMG 179

Query: 110 -------------FAVCEK---------------ALPTNNARFDFLS------------S 129
                        F+  +K               +L T    +D L+            +
Sbjct: 180 LDLPDGGHLTHGFFSATKKVSATSIFFESMPYKVSLDTGLINYDKLAEDASLFKPKIIIA 239

Query: 130 GTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA----------------------- 166
           G +CYSRCL+Y RFR+I DE ++ +F+DM+H+SGL+A                       
Sbjct: 240 GVSCYSRCLNYKRFREIADENNAYLFSDMAHVSGLVAAKLIPSPFEYSDVVSTTTHKTLR 299

Query: 167 -----------GVKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQS 215
                      GV+ + K G++I+YD E+KIN AVFP LQGGPHNHAI  IAT M Q +S
Sbjct: 300 GPRAGVIFFRKGVRKIGKDGQQIMYDLEDKINQAVFPGLQGGPHNHAIAGIATTMKQVKS 359

Query: 216 DEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIA 275
            EF  YQ Q+ ANA  L   + + GY + TGGTDVH+ L+DLR   +TG+K E +LE I+
Sbjct: 360 PEFLQYQKQIIANAKRLCSRLQEHGYKISTGGTDVHMFLVDLRNKGITGAKAEKILESIS 419

Query: 276 IACNKNT---------------------------------------GISLAAEIQAISGP 296
           IACNKNT                                       G+ LA E+  ISGP
Sbjct: 420 IACNKNTVPGDKSALNCSGIRLGTPALTTRGLVEKDIDKVVDFIHRGLLLAKEVSNISGP 479

Query: 297 KLVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPG 333
           KL+D++  L+ + +I  KV AL++E+E +S QF +PG
Sbjct: 480 KLIDYKRVLNTDVNIKAKVTALREEVETFSRQFPIPG 516

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307206360|gb|EFN84412.1| Serine hydroxymethyltransferase [Harpegnathos saltator]

 Score =  360 bits (925), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 195/459 (42%), Positives = 257/459 (55%), Gaps = 129/459 (28%)

Query: 4   STMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLP 63
           +++L+  + +TDPEL+ LIKKEK RQ  G+ELIASENFTSL+VL+CL SCL NKYSEG+P
Sbjct: 2   TSILYSNIWETDPELFELIKKEKKRQKYGLELIASENFTSLSVLQCLSSCLHNKYSEGMP 61

Query: 64  GKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV----------- 112
           G+RYYGGN++IDEIE++ Q+R+L+AFNL+PE+WGCNVQPYSGSPAN AV           
Sbjct: 62  GQRYYGGNEYIDEIELLTQKRALEAFNLNPEEWGCNVQPYSGSPANLAVYTGLIEPHGRI 121

Query: 113 -----------------CEKALPTNNARFDFLS------SGTTCYSRC------------ 137
                              K +   +  F+ +       +G   Y +C            
Sbjct: 122 MGLDLPDGGHLTHGFFTASKKISATSIFFESMPYKVNPETGLIDYDKCAELAKLFKPRVI 181

Query: 138 ----------LDYARFRQICDETDSIMFADMSHISGLIA--------------------- 166
                     LDY RFRQI DE ++ +F+DM+H+SGL+A                     
Sbjct: 182 VAGISCYSRCLDYKRFRQIADENNAYLFSDMAHVSGLVAAGLISSPFEYSDVVSTTTHKT 241

Query: 167 -------------GVKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQA 213
                        G++ + K G+KI+YD E KIN AVFP LQGGPHN+AI  IAT M Q 
Sbjct: 242 LRGPRAGVIFYRKGIRSIAKDGKKIMYDIENKINQAVFPGLQGGPHNNAIAGIATTMKQV 301

Query: 214 QSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEE 273
           +S EF +YQ QV ANA  L   +  RGY + TGGTDVH++L+DLR   +TGSK E +LE 
Sbjct: 302 KSPEFLAYQKQVVANAKRLCLSLQDRGYKISTGGTDVHMLLVDLRPMSITGSKAERILES 361

Query: 274 IAIACNKNT---------------------------------------GISLAAEIQAIS 294
           I+IACNKNT                                       G+ L+ E+ AIS
Sbjct: 362 ISIACNKNTVPGDKSALNPSGIRLGTPALTTRGLVEADIDKVAEFIHRGLLLSKEVTAIS 421

Query: 295 GPKLVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPG 333
           GPKL D++  L+ NE I  KVA L++E+E +SN+F +PG
Sbjct: 422 GPKLDDYKRVLNTNESIKAKVAHLREEVETFSNKFLIPG 460

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|229577327|ref|NP_001153354.1| serine hydroxymethyltransferase 1 (soluble) [Nasonia vitripennis]

 Score =  358 bits (918), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 198/461 (42%), Positives = 257/461 (55%), Gaps = 129/461 (27%)

Query: 5   TMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPG 64
           +M+H  + +TD EL+ L+KKEK RQ +G+E+IASENFTSL+VL+CL SCL NKYSEGLPG
Sbjct: 29  SMIHKNVWETDQELFELMKKEKIRQESGLEMIASENFTSLSVLQCLSSCLHNKYSEGLPG 88

Query: 65  KRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKA-------- 116
           +RYYGGN++IDEIE++AQ+R L+AF L+PE+WGCNVQPYSGSPANFAV            
Sbjct: 89  QRYYGGNEYIDEIELLAQKRCLEAFRLNPEEWGCNVQPYSGSPANFAVYTGLIEPHGRIM 148

Query: 117 ---LP----------TNNARFDFLS-------------SGTTCYSR-------------- 136
              LP          TNN +    S             +G   Y++              
Sbjct: 149 GLDLPDGGHLTHGFFTNNKKISATSIFFESMPYKVKPDTGLIDYNKLAEDAKLFKPKIII 208

Query: 137 --------CLDYARFRQICDETDSIMFADMSHISGLIA---------------------- 166
                   CLDY +FR+I DE ++ +F+DM+HISGL+A                      
Sbjct: 209 AGVSCYSRCLDYKKFREIADENNAYLFSDMAHISGLVAAGIIASPFEYSDVVSTTTHKTL 268

Query: 167 ------------GVKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQ 214
                       G+K + K GEKI+YD E KIN AVFP LQGGPHNHAI  IAT+M Q  
Sbjct: 269 RGPRAGVIFFRKGIKNIAKNGEKIMYDLENKINQAVFPGLQGGPHNHAIAGIATSMKQVT 328

Query: 215 SDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEI 274
             EF +YQ QV ANA  L  ++ + GY + TGGTDVH++L+DLR   LTGSK E +LEEI
Sbjct: 329 RPEFVTYQKQVIANAKRLCSQLQEFGYKISTGGTDVHMLLVDLRPVSLTGSKAEKILEEI 388

Query: 275 AIACNKNT---------------------------------------GISLAAEIQAISG 295
           +IACNKNT                                       G+ LA EI   SG
Sbjct: 389 SIACNKNTVPGDRSAFNPSGIRLGTPALTTRGLKENDIDQVAAFIHKGLILAKEITIKSG 448

Query: 296 PKLVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPGQAD 336
           PKLVDF++ L  ++   K+++ALK E+E ++  F +PG  +
Sbjct: 449 PKLVDFKSTLENDDHFRKQISALKAEVEKFAQSFPIPGHEN 489

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157129675|ref|XP_001655450.1| serine hydroxymethyltransferase [Aedes aegypti] gi|108882051|gb|EAT46276.1| AAEL002510-PB [Aedes aegypti]

 Score =  357 bits (916), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 191/460 (41%), Positives = 255/460 (55%), Gaps = 129/460 (28%)

Query: 3   SSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGL 62
           ++ +LH  L ++DPEL  LI+KEK RQ++G+E+IASENFTSL+VL+CLGSCL NKYSEGL
Sbjct: 12  NAKLLHENLWESDPELMDLIRKEKKRQVHGLEMIASENFTSLSVLQCLGSCLHNKYSEGL 71

Query: 63  PGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV---------- 112
           PG+RYYGGN+FIDEIE++AQ+R+L+A+ L+P++WGCNVQPYSGSPANFAV          
Sbjct: 72  PGQRYYGGNEFIDEIELLAQKRALEAYRLNPDEWGCNVQPYSGSPANFAVYTGLIEPHGR 131

Query: 113 ------------------CEKALPTNNARFDFLSSGTTCYSRCLDYARFRQ--------- 145
                               K +   +  F+ +       +  +DY +  +         
Sbjct: 132 IMGLDLPDGGHLTHGFMTATKKISATSIFFESMPYKVDPVTGLIDYDKLEESAKNFKPKI 191

Query: 146 -------------------ICDETDSIMFADMSHISGLIA-------------------- 166
                              I D   + +FADM+HISGL+A                    
Sbjct: 192 IIAGISCYSRCLDYKRFRQIADANGAFLFADMAHISGLVAAGVIPSPFEYADVVSTTTHK 251

Query: 167 --------------GVKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQ 212
                         GV+ V   G+K++YD E KIN AVFP +QGGPHNHAI  IAT MLQ
Sbjct: 252 SLRGPRAGVIFFRKGVRSVKPNGDKVMYDLEAKINQAVFPGIQGGPHNHAIAGIATCMLQ 311

Query: 213 AQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLE 272
           A++ EFK YQ Q+  NA  L   +++RGY + TGGTDVHL+L+DLR   +TG++ E VLE
Sbjct: 312 ARTPEFKDYQTQIIRNAQALCKGLLERGYSISTGGTDVHLVLVDLRPAGITGARAEYVLE 371

Query: 273 EIAIACNKNT---------------------------------------GISLAAEIQAI 293
           EI+IACNKNT                                       G+ L+ EI A+
Sbjct: 372 EISIACNKNTVPGDKSALNPSGIRLGTPALTTRGLVESDMTHVVDFIDRGLKLSKEITAV 431

Query: 294 SGPKLVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPG 333
           SGPKLVDF+  LH++  +  KV ALK+E++ YS +F MPG
Sbjct: 432 SGPKLVDFKRVLHEDPTLNAKVQALKEEVQAYSAKFPMPG 471

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322794373|gb|EFZ17477.1| hypothetical protein SINV_09632 [Solenopsis invicta]

 Score =  357 bits (915), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 198/474 (41%), Positives = 259/474 (54%), Gaps = 144/474 (30%)

Query: 4   STMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLP 63
           +++L   + ++D EL+ L+KKE+ RQ +G+ELIASENFTSL+VL+CL SCL NKYSEGLP
Sbjct: 2   ASILQKNIWESDSELFELMKKERKRQESGLELIASENFTSLSVLQCLSSCLHNKYSEGLP 61

Query: 64  GKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV----------- 112
           G+RYYGGN+FIDEIE++AQ+R+L+AFNLDPE+WGCNVQPYSGSPANFAV           
Sbjct: 62  GQRYYGGNEFIDEIELLAQKRALEAFNLDPEEWGCNVQPYSGSPANFAVYTGLLEPHGRI 121

Query: 113 -----------------CEKALPTNNARFDFLSSGTTCYSRCLDY--------------- 140
                              K +   +  F+ +       S  +DY               
Sbjct: 122 MGLDLPDGGHLTHGFFTATKKISATSIFFESMPYKVDPVSGLIDYDELAKQARLFKPKII 181

Query: 141 -------------ARFRQICDETDSIMFADMSHISGLIA--------------------- 166
                         RFR+I DE ++ +F+DM+H+SGL+A                     
Sbjct: 182 IAGVSCYSRCLNYKRFREIADENNAYLFSDMAHVSGLVAAGLIPSPFEFSDVVSTTTHKT 241

Query: 167 -------------GVKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQA 213
                        GV+ VTK G+KI+YD E +IN AVFP LQGGPHNHAI AIAT M Q 
Sbjct: 242 LRGPRAGVIFFRKGVRSVTKDGKKIMYDIENRINQAVFPGLQGGPHNHAIAAIATTMKQV 301

Query: 214 QSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEE 273
           ++ EF  YQ Q+ ANA  L   + + GY++ TGGTDVH++L+DLR   +TGSK E +LE+
Sbjct: 302 KTSEFLEYQKQIVANAKRLCARLQEHGYNISTGGTDVHMMLVDLRSTGITGSKAEKILED 361

Query: 274 IAIACNKNT---------------------------------------GIS--------- 285
           I+IACNKNT                                       GI+         
Sbjct: 362 ISIACNKNTVPGDKSALNPSGIRLGTPALTTRGLVEEDIAKVADFIDKGITNIYTTLYNS 421

Query: 286 ------LAAEIQAISGPKLVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPG 333
                 L+ E+ AISGPKLVDF+  L+ +E I  KVAALK+E+E +S QF MPG
Sbjct: 422 VVLRLKLSKEVSAISGPKLVDFKRVLNTDEIIKVKVAALKEEVETFSRQFSMPG 475

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|24640005|ref|NP_572278.1| CG3011, isoform A [Drosophila melanogaster] gi|7290652|gb|AAF46101.1| CG3011, isoform A [Drosophila melanogaster] gi|41058049|gb|AAR99090.1| RH67089p [Drosophila melanogaster] gi|220951154|gb|ACL88120.1| CG3011-PA [synthetic construct] gi|220959690|gb|ACL92388.1| CG3011-PA [synthetic construct]

 Score =  352 bits (902), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 193/463 (41%), Positives = 245/463 (52%), Gaps = 130/463 (28%)

Query: 1   MSSSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSE 60
           M+   +L   LAQ DPEL  LIKKEK RQ  G+E+IASENFTS+AVLE L SCL NKYSE
Sbjct: 71  MADQKLLQTPLAQGDPELAELIKKEKERQREGLEMIASENFTSVAVLESLSSCLTNKYSE 130

Query: 61  GLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFA----VCE-- 114
           G PGKRYYGGN++ID IE++AQQR  + FNLD E+WG NVQPYSGSPAN A    VC   
Sbjct: 131 GYPGKRYYGGNEYIDRIELLAQQRGRELFNLDDEKWGVNVQPYSGSPANLAVYTGVCRPH 190

Query: 115 --------------------------------KALP------------------TNNARF 124
                                           +++P                    N R 
Sbjct: 191 DRIMGLDLPDGGHLTHGFFTPTKKISATSIFFESMPYKVNPETGIIDYDKLAEAAKNFRP 250

Query: 125 DFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA------------------ 166
             + +G +CYSR LDYARFRQICD+  + + ADM+H++G++A                  
Sbjct: 251 QIIIAGISCYSRLLDYARFRQICDDVGAYLMADMAHVAGIVAAGLIPSPFEWADIVTTTT 310

Query: 167 ----------------GVKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAM 210
                           GV+     G+K+LYD EE+IN AVFPSLQGGPHN+A+  IATA 
Sbjct: 311 HKTLRGPRAGVIFFRKGVRSTKANGDKVLYDLEERINQAVFPSLQGGPHNNAVAGIATAF 370

Query: 211 LQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELV 270
            QA+S EFK+YQ QV  NA  L D +I RGY V TGGTDVHL+L+D+RK  LTG+K E +
Sbjct: 371 KQAKSPEFKAYQTQVLKNAKALCDGLISRGYQVATGGTDVHLVLVDVRKAGLTGAKAEYI 430

Query: 271 LEEIAIACNKNT-----------GISLAAEIQAISG------------------------ 295
           LEE+ IACNKNT           GI L        G                        
Sbjct: 431 LEEVGIACNKNTVPGDKSAMNPSGIRLGTPALTTRGLAEQDIEQVVAFIDAALKVGVQAA 490

Query: 296 -----PKLVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPG 333
                PK+ D+   L +N ++  +V  ++K +  +S +F +PG
Sbjct: 491 KLAGSPKITDYHKTLAENVELKAQVDEIRKNVAQFSRKFPLPG 533

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383865329|ref|XP_003708127.1| PREDICTED: serine hydroxymethyltransferase, cytosolic-like [Megachile rotundata]

 Score =  350 bits (898), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 191/457 (41%), Positives = 254/457 (55%), Gaps = 129/457 (28%)

Query: 6   MLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGK 65
           +++  + +TDPEL+ ++KKEK RQ  G+E+IASENFTSL+VL+CL SCL NKYSEGLPG+
Sbjct: 4   IIYKNVWETDPELFEIMKKEKKRQEVGLEMIASENFTSLSVLQCLSSCLHNKYSEGLPGQ 63

Query: 66  RYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV------------- 112
           RYYGGNQ+IDEIE++AQ+RSL+AFNL+PE+WGCNVQPYSGSPANFAV             
Sbjct: 64  RYYGGNQYIDEIELLAQKRSLEAFNLNPEEWGCNVQPYSGSPANFAVYTGLIEPHGRIMG 123

Query: 113 ---------------CEKALPTNNARFDF------LSSGTTCYSRCLDYAR--------- 142
                            K +   +  F+       L +G   Y +  + AR         
Sbjct: 124 LDLPDGGHLTHGFFTLNKKVSATSIFFESMPYKVNLETGLIDYDKLAEEARLFKPKIIIA 183

Query: 143 -------------FRQICDETDSIMFADMSHISGLIA----------------------- 166
                        FR+I DE ++ +F+DM+H+SGL+A                       
Sbjct: 184 GVSCYSRCLDYKRFRKIADENNAYLFSDMAHVSGLVAAGLIPSPFEYSDIVSTTTHKTLR 243

Query: 167 -----------GVKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQS 215
                      GVK + K G KI+Y++E+KIN AVFP LQGGPHNHAI  IATAM Q +S
Sbjct: 244 GPRAGIIFFRKGVKSIDKDGNKIMYNFEDKINQAVFPGLQGGPHNHAIAGIATAMKQVKS 303

Query: 216 DEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIA 275
            EF  YQ Q+ ANA  L   + + GY + T GTDVH++L+DLR   +TG+K E +LE I+
Sbjct: 304 PEFLQYQKQIVANAKRLCSGLKELGYKISTDGTDVHMLLVDLRSTGVTGAKAETILESIS 363

Query: 276 IACNKNT---------------------------------------GISLAAEIQAISGP 296
           IACNKNT                                       G+ L+ E+  ISGP
Sbjct: 364 IACNKNTVPGDKSALHSSGIRLGTPALTTRGLVEKDIDEVVRFIHQGLLLSKEVSNISGP 423

Query: 297 KLVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPG 333
           KLVD++  L+ N DI  K+A L++E+E +S QF +PG
Sbjct: 424 KLVDYKRVLNTNADIQAKIAVLREEVETFSKQFPIPG 460

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357624950|gb|EHJ75530.1| serine hydroxymethyltransferase [Danaus plexippus]

 Score =  344 bits (882), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 194/456 (42%), Positives = 242/456 (53%), Gaps = 129/456 (28%)

Query: 7   LHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKR 66
           L+G L +TDPELY +IK+EK RQ +G+E+IASENFTS+AVL+CL SCL NKYSEG+P +R
Sbjct: 6   LNGDLWETDPELYDIIKQEKQRQASGLEMIASENFTSVAVLQCLSSCLHNKYSEGMPHQR 65

Query: 67  YYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV-------------- 112
           YYGGN+FIDE+EI+AQQRSL+A+ L PE+WG NVQPYSGSPANFAV              
Sbjct: 66  YYGGNEFIDEVEILAQQRSLQAYKLKPEEWGVNVQPYSGSPANFAVYTGIVEPHGRIMGL 125

Query: 113 --------------CEKALPTNNARFDFLSSGTTCYSRCLDYAR---------------- 142
                           K +   +  F+ +       S  +DY +                
Sbjct: 126 DLPDGGHLTHGFFTATKKISATSIFFESMPYKVDPKSGLIDYEQLAVSVKLFKPRLIIAG 185

Query: 143 ------------FRQICDETDSIMFADMSHISGLIA------------------------ 166
                       FR+I DE  +I+ ADM+HISGL+A                        
Sbjct: 186 MSCYSRCLDYKRFREIADENGAILMADMAHISGLVAAGVIPSPFEFCDIVTTTTHKTLRG 245

Query: 167 ----------GVKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSD 216
                     GVK V   GEK++YDYE KIN AVFP LQGGPHNHAI AIATAM QA   
Sbjct: 246 PRAGVIFYRKGVKSVNSKGEKVMYDYESKINQAVFPGLQGGPHNHAIAAIATAMKQAMLP 305

Query: 217 EFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAI 276
           EF  YQ QV  NA  L + +  RGY++ TGGTD+HL L+D+R   L+G++ E +LE  +I
Sbjct: 306 EFVEYQRQVINNAQRLCEGLKSRGYNIATGGTDLHLALVDVRNKGLSGARAERILELCSI 365

Query: 277 ACNKNT---------------------------------------GISLAAEIQAISGPK 297
           ACNKNT                                        +SLA EI   SGPK
Sbjct: 366 ACNKNTVPGDKSALNPSGIRLGTPALTTRGLKESDFDKVVDYIDKALSLAQEITKSSGPK 425

Query: 298 LVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPG 333
           LVDF   +  N DI  K+  LK+E+E YS  F +PG
Sbjct: 426 LVDFNKFIEDNADIKAKINNLKEEVEKYSQSFPLPG 461

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	337
FB|FBgn0029823	537	CG3011 [Drosophila melanogaste	0.332	0.208	0.696	1.4e-98
MGI|MGI:98299	478	Shmt1 "serine hydroxymethyltra	0.329	0.232	0.666	5.3e-90
UNIPROTKB|E2RIV3	484	SHMT1 "Uncharacterized protein	0.329	0.229	0.675	1.2e-88
UNIPROTKB|P34897	504	SHMT2 "Serine hydroxymethyltra	0.305	0.204	0.669	2.5e-88
RGD|1308582	504	Shmt2 "serine hydroxymethyltra	0.302	0.202	0.666	2.5e-88
UNIPROTKB|P34896	483	SHMT1 "Serine hydroxymethyltra	0.329	0.229	0.657	6.5e-88
UNIPROTKB|E1BS67	486	SHMT1 "Uncharacterized protein	0.329	0.228	0.684	8.3e-88
UNIPROTKB|A8MYA6	446	SHMT1 "Serine hydroxymethyltra	0.501	0.378	0.491	9.7e-88
RGD|1312011	681	Shmt1 "serine hydroxymethyltra	0.329	0.162	0.666	7e-87
UNIPROTKB|P14519	504	SHMT2 "Serine hydroxymethyltra	0.302	0.202	0.666	1.2e-86

FB|FBgn0029823 CG3011 [Drosophila melanogaster (taxid:7227)]

 Score = 406 (148.0 bits), Expect = 1.4e-98, Sum P(4) = 1.4e-98
 Identities = 78/112 (69%), Positives = 89/112 (79%)

Query:     1 MSSSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSE 60
             M+   +L   LAQ DPEL  LIKKEK RQ  G+E+IASENFTS+AVLE L SCL NKYSE
Sbjct:    71 MADQKLLQTPLAQGDPELAELIKKEKERQREGLEMIASENFTSVAVLESLSSCLTNKYSE 130

Query:    61 GLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112
             G PGKRYYGGN++ID IE++AQQR  + FNLD E+WG NVQPYSGSPAN AV
Sbjct:   131 GYPGKRYYGGNEYIDRIELLAQQRGRELFNLDDEKWGVNVQPYSGSPANLAV 182

GO:0004372 "glycine hydroxymethyltransferase activity" evidence=ISS

GO:0006564 "L-serine biosynthetic process" evidence=ISS

GO:0005739 "mitochondrion" evidence=ISS

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0006544 "glycine metabolic process" evidence=IEA

GO:0048149 "behavioral response to ethanol" evidence=IMP

MGI|MGI:98299 Shmt1 "serine hydroxymethyltransferase 1 (soluble)" [Mus musculus (taxid:10090)]

 Score = 391 (142.7 bits), Expect = 5.3e-90, Sum P(4) = 5.3e-90
 Identities = 74/111 (66%), Positives = 90/111 (81%)

Query:     2 SSSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEG 61
             S   ML   L  +D E+YS+IKKE +RQ  G+ELIASENF S AVLE LGSCL NKYSEG
Sbjct:    11 SHEKMLSQPLKDSDAEVYSIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEG 70

Query:    62 LPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112
              PG+RYYGG +FIDE+E++ Q+R+L+A++LDP+ WG NVQPYSGSPANFAV
Sbjct:    71 YPGQRYYGGTEFIDELEMLCQKRALQAYHLDPQCWGVNVQPYSGSPANFAV 121

GO:0003824 "catalytic activity" evidence=IEA

GO:0004372 "glycine hydroxymethyltransferase activity" evidence=ISO

GO:0005737 "cytoplasm" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

GO:0005829 "cytosol" evidence=ISO

GO:0006544 "glycine metabolic process" evidence=ISO

GO:0006545 "glycine biosynthetic process" evidence=ISO

GO:0006563 "L-serine metabolic process" evidence=IEA

GO:0006565 "L-serine catabolic process" evidence=ISO

GO:0006730 "one-carbon metabolic process" evidence=IEA

GO:0008732 "L-allo-threonine aldolase activity" evidence=ISO

GO:0009113 "purine nucleobase biosynthetic process" evidence=ISO

GO:0016597 "amino acid binding" evidence=ISO

GO:0016740 "transferase activity" evidence=IEA

GO:0019264 "glycine biosynthetic process from serine" evidence=ISO

GO:0030170 "pyridoxal phosphate binding" evidence=ISO

GO:0042802 "identical protein binding" evidence=ISO

GO:0042803 "protein homodimerization activity" evidence=ISO

GO:0046655 "folic acid metabolic process" evidence=ISO

GO:0051262 "protein tetramerization" evidence=ISO

GO:0051289 "protein homotetramerization" evidence=ISO

UNIPROTKB|E2RIV3 SHMT1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 392 (143.0 bits), Expect = 1.2e-88, Sum P(4) = 1.2e-88
 Identities = 75/111 (67%), Positives = 88/111 (79%)

Query:     2 SSSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEG 61
             S   ML   L   D E+Y++IKKE +RQ  G+ELIASENFTS AVLE LGSCL NKYSEG
Sbjct:    17 SHDKMLAEPLKDNDTEVYNIIKKESNRQRVGLELIASENFTSRAVLEALGSCLNNKYSEG 76

Query:    62 LPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112
              PG+RYYGG +FIDE+EI+ Q+R+L+ + LDPE WG NVQPYSGSPANFAV
Sbjct:    77 YPGQRYYGGTEFIDELEILCQKRALQVYGLDPECWGVNVQPYSGSPANFAV 127

GO:0035999 "tetrahydrofolate interconversion" evidence=IEA

GO:0051262 "protein tetramerization" evidence=IEA

GO:0046655 "folic acid metabolic process" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0009113 "purine nucleobase biosynthetic process" evidence=IEA

GO:0006565 "L-serine catabolic process" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0006544 "glycine metabolic process" evidence=IEA

GO:0004372 "glycine hydroxymethyltransferase activity" evidence=IEA

UNIPROTKB|P34897 SHMT2 "Serine hydroxymethyltransferase, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 382 (139.5 bits), Expect = 2.5e-88, Sum P(4) = 2.5e-88
 Identities = 69/103 (66%), Positives = 86/103 (83%)

Query:    10 TLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYG 69
             +L+ +DPE++ L+++EK RQ  G+ELIASENF S A LE LGSCL NKYSEG PGKRYYG
Sbjct:    48 SLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYG 107

Query:    70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112
             G + +DEIE++ Q+R+L+AF+LDP QWG NVQPYSGSPAN AV
Sbjct:   108 GAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAV 150

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0005758 "mitochondrial intermembrane space" evidence=IEA

GO:0006564 "L-serine biosynthetic process" evidence=IEA

GO:0008284 "positive regulation of cell proliferation" evidence=IEA

GO:0008732 "L-allo-threonine aldolase activity" evidence=IEA

GO:0016597 "amino acid binding" evidence=IEA

GO:0019264 "glycine biosynthetic process from serine" evidence=IEA

GO:0042802 "identical protein binding" evidence=IEA

GO:0051289 "protein homotetramerization" evidence=IEA

GO:0035999 "tetrahydrofolate interconversion" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

GO:0004372 "glycine hydroxymethyltransferase activity" evidence=IDA

GO:0006730 "one-carbon metabolic process" evidence=IDA

GO:0005759 "mitochondrial matrix" evidence=IDA

GO:0005743 "mitochondrial inner membrane" evidence=IDA

GO:0003682 "chromatin binding" evidence=IDA

GO:0042645 "mitochondrial nucleoid" evidence=IDA

GO:0015630 "microtubule cytoskeleton" evidence=IDA

RGD|1308582 Shmt2 "serine hydroxymethyltransferase 2 (mitochondrial)" [Rattus norvegicus (taxid:10116)]

 Score = 378 (138.1 bits), Expect = 2.5e-88, Sum P(4) = 2.5e-88
 Identities = 68/102 (66%), Positives = 85/102 (83%)

Query:    10 TLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYG 69
             +L+ +DPE++ L+++EK RQ  G+ELIASENF S A LE LGSCL NKYSEG PGKRYYG
Sbjct:    48 SLSDSDPEIWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYG 107

Query:    70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFA 111
             G + +DEIE++ Q+R+L+AF+LDP QWG NVQPYSGSPAN A
Sbjct:   108 GAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLA 149

GO:0003682 "chromatin binding" evidence=IEA;ISO

GO:0004372 "glycine hydroxymethyltransferase activity" evidence=ISO;IDA;TAS

GO:0005739 "mitochondrion" evidence=ISO;IDA;TAS

GO:0005743 "mitochondrial inner membrane" evidence=ISO;IDA

GO:0005758 "mitochondrial intermembrane space" evidence=IDA

GO:0005759 "mitochondrial matrix" evidence=ISO;IDA

GO:0006544 "glycine metabolic process" evidence=IDA;TAS

GO:0006545 "glycine biosynthetic process" evidence=IDA

GO:0006563 "L-serine metabolic process" evidence=TAS

GO:0006564 "L-serine biosynthetic process" evidence=IDA

GO:0006730 "one-carbon metabolic process" evidence=ISO

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0008284 "positive regulation of cell proliferation" evidence=IDA

GO:0008732 "L-allo-threonine aldolase activity" evidence=IDA

GO:0015630 "microtubule cytoskeleton" evidence=IEA;ISO

GO:0016597 "amino acid binding" evidence=IPI

GO:0019264 "glycine biosynthetic process from serine" evidence=IDA

GO:0030170 "pyridoxal phosphate binding" evidence=IDA;TAS

GO:0035999 "tetrahydrofolate interconversion" evidence=IEA

GO:0042645 "mitochondrial nucleoid" evidence=IEA;ISO

GO:0042802 "identical protein binding" evidence=IDA

GO:0051289 "protein homotetramerization" evidence=IDA

UNIPROTKB|P34896 SHMT1 "Serine hydroxymethyltransferase, cytosolic" [Homo sapiens (taxid:9606)]

 Score = 383 (139.9 bits), Expect = 6.5e-88, Sum P(4) = 6.5e-88
 Identities = 73/111 (65%), Positives = 88/111 (79%)

Query:     2 SSSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEG 61
             S   ML   L  +D E+Y++IKKE +RQ  G+ELIASENF S AVLE LGSCL NKYSEG
Sbjct:    17 SHDKMLAQPLKDSDVEVYNIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEG 76

Query:    62 LPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112
              PG+RYYGG +FIDE+E + Q+R+L+A+ LDP+ WG NVQPYSGSPANFAV
Sbjct:    77 YPGQRYYGGTEFIDELETLCQKRALQAYKLDPQCWGVNVQPYSGSPANFAV 127

GO:0005739 "mitochondrion" evidence=IEA

GO:0008732 "L-allo-threonine aldolase activity" evidence=IEA

GO:0016597 "amino acid binding" evidence=IEA

GO:0019264 "glycine biosynthetic process from serine" evidence=IEA

GO:0051289 "protein homotetramerization" evidence=IEA

GO:0035999 "tetrahydrofolate interconversion" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IDA

GO:0051262 "protein tetramerization" evidence=IDA

GO:0046655 "folic acid metabolic process" evidence=IDA;TAS

GO:0030170 "pyridoxal phosphate binding" evidence=IDA

GO:0005829 "cytosol" evidence=IDA;TAS

GO:0004372 "glycine hydroxymethyltransferase activity" evidence=IDA;TAS

GO:0006565 "L-serine catabolic process" evidence=IDA

GO:0009113 "purine nucleobase biosynthetic process" evidence=IDA

GO:0006766 "vitamin metabolic process" evidence=TAS

GO:0006767 "water-soluble vitamin metabolic process" evidence=TAS

GO:0034641 "cellular nitrogen compound metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

GO:0045329 "carnitine biosynthetic process" evidence=TAS

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

UNIPROTKB|E1BS67 SHMT1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 402 (146.6 bits), Expect = 8.3e-88, Sum P(4) = 8.3e-88
 Identities = 76/111 (68%), Positives = 90/111 (81%)

Query:     2 SSSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEG 61
             S S ML   L   DPE+Y++IKKEK RQ  G+ELIASENF S AVLE LGSCL NKYSEG
Sbjct:    19 SHSKMLLEPLDSNDPEVYNIIKKEKQRQRLGLELIASENFASCAVLEALGSCLNNKYSEG 78

Query:    62 LPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112
              PG+RYYGG +F+DE+E + Q+R+L+AF LDP++WG NVQPYSGSPANFAV
Sbjct:    79 YPGQRYYGGTEFVDELERLCQKRALQAFRLDPQKWGVNVQPYSGSPANFAV 129

GO:0004372 "glycine hydroxymethyltransferase activity" evidence=IEA

GO:0006544 "glycine metabolic process" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0035999 "tetrahydrofolate interconversion" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0006565 "L-serine catabolic process" evidence=IEA

GO:0009113 "purine nucleobase biosynthetic process" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0046655 "folic acid metabolic process" evidence=IEA

GO:0051262 "protein tetramerization" evidence=IEA

UNIPROTKB|A8MYA6 SHMT1 "Serine hydroxymethyltransferase, cytosolic" [Homo sapiens (taxid:9606)]

 Score = 392 (143.0 bits), Expect = 9.7e-88, Sum P(3) = 9.7e-88
 Identities = 86/175 (49%), Positives = 115/175 (65%)

Query:   167 GVKGVT-KTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQV 225
             GVK V  KTG++ILY+ E  IN+AVFP LQGGPHNHAI  +A A+ QA + EFK YQ QV
Sbjct:   272 GVKSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTLEFKVYQHQV 331

Query:   226 KANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT--G 283
              AN   LS+ + + GY +VTGG+D HLIL+DLR     G + E VLE  +IACNKNT  G
Sbjct:   332 VANCRALSEALTELGYKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPG 391

Query:   284 ISLAAEIQAISGPK--LVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPGQAD 336
             I L  +IQ+ +G +  L +F+  L   +     V AL++E+E +++ F +PG  D
Sbjct:   392 IELTLQIQSDTGVRATLKEFKERL-AGDKYQAAVQALREEVESFASLFPLPGLPD 445

GO:0004372 "glycine hydroxymethyltransferase activity" evidence=IEA

GO:0006544 "glycine metabolic process" evidence=IEA

GO:0006563 "L-serine metabolic process" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0035999 "tetrahydrofolate interconversion" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

RGD|1312011 Shmt1 "serine hydroxymethyltransferase 1 (soluble)" [Rattus norvegicus (taxid:10116)]

 Score = 390 (142.3 bits), Expect = 7.0e-87, Sum P(4) = 7.0e-87
 Identities = 74/111 (66%), Positives = 90/111 (81%)

Query:     2 SSSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEG 61
             S   ML   L ++D E+YS+IKKE +RQ  G+ELIASENF S AVLE LGSCL NKYSEG
Sbjct:   214 SHEKMLTQPLKESDAEVYSIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEG 273

Query:    62 LPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112
              PG+RYYGG +FIDE+E + Q+R+L+A++LDP+ WG NVQPYSGSPANFAV
Sbjct:   274 YPGQRYYGGTEFIDELETLCQKRALQAYHLDPQCWGVNVQPYSGSPANFAV 324

GO:0004372 "glycine hydroxymethyltransferase activity" evidence=ISO;IDA;TAS

GO:0005634 "nucleus" evidence=IEA;ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0005739 "mitochondrion" evidence=IEA;ISO

GO:0005829 "cytosol" evidence=ISO;IDA;TAS

GO:0006544 "glycine metabolic process" evidence=IDA;TAS

GO:0006545 "glycine biosynthetic process" evidence=IDA

GO:0006563 "L-serine metabolic process" evidence=TAS

GO:0006565 "L-serine catabolic process" evidence=IEA;ISO

GO:0008732 "L-allo-threonine aldolase activity" evidence=IDA

GO:0009113 "purine nucleobase biosynthetic process" evidence=IEA;ISO

GO:0016597 "amino acid binding" evidence=IPI

GO:0019264 "glycine biosynthetic process from serine" evidence=IDA

GO:0030170 "pyridoxal phosphate binding" evidence=ISO;IDA;TAS

GO:0035999 "tetrahydrofolate interconversion" evidence=IEA

GO:0042802 "identical protein binding" evidence=IDA

GO:0042803 "protein homodimerization activity" evidence=IEA;ISO

GO:0046655 "folic acid metabolic process" evidence=IEA;ISO

GO:0051262 "protein tetramerization" evidence=ISO

GO:0051289 "protein homotetramerization" evidence=IDA

UNIPROTKB|P14519 SHMT2 "Serine hydroxymethyltransferase, mitochondrial" [Oryctolagus cuniculus (taxid:9986)]

 Score = 376 (137.4 bits), Expect = 1.2e-86, Sum P(4) = 1.2e-86
 Identities = 68/102 (66%), Positives = 84/102 (82%)

Query:    10 TLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYG 69
             +L+ TDPE++ L+++EK RQ  G+ELIASENF   A LE LGSCL NKYSEG PGKRYYG
Sbjct:    48 SLSDTDPEMWELLQREKDRQCRGLELIASENFCIRAALEALGSCLNNKYSEGYPGKRYYG 107

Query:    70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFA 111
             G + +DEIE++ Q+R+L+AF+LDP QWG NVQPYSGSPAN A
Sbjct:   108 GAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLA 149

GO:0003682 "chromatin binding" evidence=ISS

GO:0005743 "mitochondrial inner membrane" evidence=ISS

GO:0005759 "mitochondrial matrix" evidence=ISS

GO:0042645 "mitochondrial nucleoid" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8UG75	GLYA1_AGRT5	2, ., 1, ., 2, ., 1	0.3931	0.8130	0.6386	yes	N/A
A4XL61	GLYA_CALS8	2, ., 1, ., 2, ., 1	0.3612	0.8041	0.6498	yes	N/A
A4J9B1	GLYA_DESRM	2, ., 1, ., 2, ., 1	0.3919	0.8071	0.6585	yes	N/A
A4ITJ9	GLYA_GEOTN	2, ., 1, ., 2, ., 1	0.3527	0.7952	0.6504	yes	N/A
Q2KA25	GLYA_RHIEC	2, ., 1, ., 2, ., 1	0.3659	0.8724	0.6805	yes	N/A
Q3AW18	GLYA_SYNS9	2, ., 1, ., 2, ., 1	0.3778	0.8189	0.6433	yes	N/A
Q54EW1	GLYC2_DICDI	2, ., 1, ., 2, ., 1	0.3473	0.9525	0.6673	yes	N/A
Q6AM21	GLYA_DESPS	2, ., 1, ., 2, ., 1	0.3976	0.7952	0.6305	yes	N/A
Q10104	GLYM_SCHPO	2, ., 1, ., 2, ., 1	0.3619	0.9347	0.6454	yes	N/A
Q3AN03	GLYA_SYNSC	2, ., 1, ., 2, ., 1	0.3711	0.8219	0.6426	yes	N/A
Q2RFW7	GLYA_MOOTA	2, ., 1, ., 2, ., 1	0.3644	0.7952	0.6442	yes	N/A
A6LKU9	GLYA_THEM4	2, ., 1, ., 2, ., 1	0.3688	0.7863	0.625	yes	N/A
B9LKK8	GLYA_CHLSY	2, ., 1, ., 2, ., 1	0.3713	0.7922	0.6372	yes	N/A
B9JV74	GLYA_AGRVS	2, ., 1, ., 2, ., 1	0.3931	0.8130	0.6386	yes	N/A
B8E008	GLYA_DICTD	2, ., 1, ., 2, ., 1	0.3673	0.7952	0.6473	yes	N/A
B2V398	GLYA_CLOBA	2, ., 1, ., 2, ., 1	0.3673	0.7952	0.6520	yes	N/A
A9WI58	GLYA_CHLAA	2, ., 1, ., 2, ., 1	0.3713	0.7922	0.6372	yes	N/A
P50432	GLYC_CAEEL	2, ., 1, ., 2, ., 1	0.3622	0.9525	0.6331	yes	N/A
Q5KUI2	GLYA_GEOKA	2, ., 1, ., 2, ., 1	0.3615	0.7952	0.6504	yes	N/A
Q97GV1	GLYA_CLOAB	2, ., 1, ., 2, ., 1	0.3735	0.7863	0.6447	yes	N/A
A0LV49	GLYA_ACIC1	2, ., 1, ., 2, ., 1	0.3739	0.8249	0.6510	yes	N/A
O66776	GLYA_AQUAE	2, ., 1, ., 2, ., 1	0.3771	0.7922	0.6238	yes	N/A
Q92QU6	GLYA1_RHIME	2, ., 1, ., 2, ., 1	0.3681	0.9228	0.7215	yes	N/A
B0TI64	GLYA_HELMI	2, ., 1, ., 2, ., 1	0.3739	0.8130	0.6634	yes	N/A
B9KAQ7	GLYA_THENN	2, ., 1, ., 2, ., 1	0.3575	0.7952	0.6276	yes	N/A
A8MGL7	GLYA_ALKOO	2, ., 1, ., 2, ., 1	0.3720	0.7982	0.6560	yes	N/A
D3DKC4	GLYA_HYDTT	4, ., 1, ., 2, ., 4, 8	0.3859	0.7922	0.6252	yes	N/A
B2A3H6	GLYA_NATTJ	2, ., 1, ., 2, ., 1	0.3888	0.7922	0.6480	yes	N/A
Q6FUP6	GLYC_CANGA	2, ., 1, ., 2, ., 1	0.3486	0.9673	0.6950	yes	N/A
Q5FNK4	GLYA_GLUOX	2, ., 1, ., 2, ., 1	0.3774	0.8189	0.6359	yes	N/A
B9MR57	GLYA_CALBD	2, ., 1, ., 2, ., 1	0.3699	0.8041	0.6530	yes	N/A
Q1D345	GLYA_MYXXD	2, ., 1, ., 2, ., 1	0.3731	0.7952	0.6411	yes	N/A
P07511	GLYC_RABIT	2, ., 1, ., 2, ., 1	0.3814	0.9851	0.6859	yes	N/A
A1B0I7	GLYA_PARDP	2, ., 1, ., 2, ., 1	0.3676	0.9317	0.7353	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.1.2	0.766
4th Layer	2.1.2.1	0.824

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	337
PLN03226	475	PLN03226, PLN03226, serine hydroxymethyltransferas	1e-141
pfam00464	380	pfam00464, SHMT, Serine hydroxymethyltransferase	1e-113
PRK00011	416	PRK00011, glyA, serine hydroxymethyltransferase; R	1e-102
COG0112	413	COG0112, GlyA, Glycine/serine hydroxymethyltransfe	1e-101
PTZ00094	452	PTZ00094, PTZ00094, serine hydroxymethyltransferas	2e-74
PTZ00094	452	PTZ00094, PTZ00094, serine hydroxymethyltransferas	3e-63
cd00378	402	cd00378, SHMT, Serine-glycine hydroxymethyltransfe	6e-60
PRK13034	416	PRK13034, PRK13034, serine hydroxymethyltransferas	1e-50
cd00378	402	cd00378, SHMT, Serine-glycine hydroxymethyltransfe	2e-47
PLN02271	586	PLN02271, PLN02271, serine hydroxymethyltransferas	9e-47
PLN02271	586	PLN02271, PLN02271, serine hydroxymethyltransferas	3e-44
PRK13034	416	PRK13034, PRK13034, serine hydroxymethyltransferas	3e-36
PRK13580	493	PRK13580, PRK13580, serine hydroxymethyltransferas	2e-30
PRK13580	493	PRK13580, PRK13580, serine hydroxymethyltransferas	9e-17

>gnl|CDD|215639 PLN03226, PLN03226, serine hydroxymethyltransferase; Provisional

 Score =  408 bits (1050), Expect = e-141
 Identities = 176/456 (38%), Positives = 231/456 (50%), Gaps = 130/456 (28%)

Query: 7   LHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKR 66
            +  L + DPE+  +I+KEK RQ  G+ELIASENFTS AV+E LGSCL NKYSEGLPG R
Sbjct: 11  GNAPLEEVDPEIADIIEKEKRRQWKGLELIASENFTSRAVMEALGSCLTNKYSEGLPGAR 70

Query: 67  YYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPTNN--ARF 124
           YYGGN++ID+IE + Q+R+L+AF LDPE+WG NVQP SGSPANFAV    L  ++     
Sbjct: 71  YYGGNEYIDQIETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFAVYTALLQPHDRIMGL 130

Query: 125 DFLS---------------SGTTCYSRCLDY------------------ARFR------- 144
           D                  S T+ Y   + Y                    FR       
Sbjct: 131 DLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDESTGLIDYDKLEKKAMLFRPKLIIAG 190

Query: 145 --------------QICDETDSIMFADMSHISGLIA------------------------ 166
                         +I D+  +++  DM+HISGL+A                        
Sbjct: 191 ASAYPRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAASPFEYCDVVTTTTHKSLRG 250

Query: 167 ----------GVKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSD 216
                     G K     GE  +YDYE+KIN AVFP LQGGPHNH I A+A A+ QA + 
Sbjct: 251 PRGGMIFFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTP 310

Query: 217 EFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAI 276
           EFK+YQ QVKANA+ L++ ++ +GY +VTGGTD HL+L DLR   LTGS+VE VL+   I
Sbjct: 311 EFKAYQKQVKANAAALANRLMSKGYKLVTGGTDNHLVLWDLRPLGLTGSRVEKVLDLAHI 370

Query: 277 ACNKNT---------------------------------------GISLAAEIQAISGPK 297
             NKN                                         +++A +IQ   G K
Sbjct: 371 TLNKNAVPGDSSALVPGGVRIGTPAMTSRGLVEKDFEKVAEFLHRAVTIALKIQKEHGKK 430

Query: 298 LVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPG 333
           L DF+  L ++ D  K + AL+ E+E+++  F MPG
Sbjct: 431 LKDFKKGL-ESNDFSKDIEALRAEVEEFATSFPMPG 465

Length = 475

>gnl|CDD|189558 pfam00464, SHMT, Serine hydroxymethyltransferase

 Score =  334 bits (858), Expect = e-113
 Identities = 148/346 (42%), Positives = 189/346 (54%), Gaps = 78/346 (22%)

Query: 11  LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG 70
           L+ +DPE++ +IKKEK RQ  GIELIASENFTS AV+E LGS L NKY+EG PGKRYYGG
Sbjct: 1   LSDSDPEIFDIIKKEKERQREGIELIASENFTSRAVMEALGSVLTNKYAEGYPGKRYYGG 60

Query: 71  NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYS-------------------------- 104
            +++DE+E +AQ R+ + F LD    G NVQP S                          
Sbjct: 61  CEYVDEVETLAQDRAKELFGLD----GVNVQPLSGSQANLAVYTALLNPGDRIMGLDLPH 116

Query: 105 ------GSPAN-----FAVCEKALPTNNARFDF--------------LSSGTTCYSRCLD 139
                 G P N     F      +  +    D+              + +GT+ YSR +D
Sbjct: 117 GGHLTHGYPVNFSGKFFESMPYGVDPDTGLIDYDQLEKNAKLFKPKLIVAGTSAYSRLID 176

Query: 140 YARFRQICDETDSIMFADMSHISGLIA-GVKG--------VTKTGEK------------- 177
           YARFR+I DE  + +  DM+HI+GL+A GV          VT T  K             
Sbjct: 177 YARFREIADEVGAYLMVDMAHIAGLVAAGVIPSPFPYAHVVTTTTHKTLRGPRGGMIFFR 236

Query: 178 -ILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEM 236
            ILY+ E+KIN+AVFP LQGGP NH I A A A+ QA + EFK YQ QV  NA  L++ +
Sbjct: 237 EILYELEKKINSAVFPGLQGGPLNHVIAAKAVALKQALTPEFKVYQQQVLKNAKALAEAL 296

Query: 237 IKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
            +RGY +V+GGTD HL+L+DLR   L G + E  LE   I  NKNT
Sbjct: 297 KERGYKLVSGGTDNHLVLVDLRPKGLDGKRAEKALERANITANKNT 342

Length = 380

>gnl|CDD|234571 PRK00011, glyA, serine hydroxymethyltransferase; Reviewed

 Score =  306 bits (787), Expect = e-102
 Identities = 133/355 (37%), Positives = 174/355 (49%), Gaps = 88/355 (24%)

Query: 6   MLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGK 65
                LA+ DPE+   I++E  RQ   IELIASENF S AV+E  GS L NKY+EG PGK
Sbjct: 1   FFMDNLAEYDPEIADAIEQELKRQEEHIELIASENFVSPAVMEAQGSVLTNKYAEGYPGK 60

Query: 66  RYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYS--------------------- 104
           RYYGG +++D +E +A  R+ + F  +      NVQP+S                     
Sbjct: 61  RYYGGCEYVDVVEQLAIDRAKELFGAE----YANVQPHSGSQANAAVYFALLKPGDTILG 116

Query: 105 -----------GSPANF----------------------AVCEKAL---PTNNARFDFLS 128
                      GSP NF                       V + AL   P        + 
Sbjct: 117 MDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGLIDYDEVEKLALEHKP------KLII 170

Query: 129 SGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIAG------VKG---VTKTGEK-- 177
           +G + YSR +D+ RFR+I DE  + +  DM+HI+GL+A       V     VT T  K  
Sbjct: 171 AGASAYSRPIDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVPHADVVTTTTHKTL 230

Query: 178 -------ILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKA 227
                  IL    +  +KIN+AVFP +QGGP  H I A A A  +A   EFK Y  QV  
Sbjct: 231 RGPRGGLILTNDEELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVK 290

Query: 228 NASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
           NA  L++ + +RG+ VV+GGTD HL+L+DLR   LTG + E  LEE  I  NKN 
Sbjct: 291 NAKALAEALAERGFRVVSGGTDNHLVLVDLRSKGLTGKEAEAALEEANITVNKNA 345

Length = 416

>gnl|CDD|223190 COG0112, GlyA, Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]

 Score =  304 bits (780), Expect = e-101
 Identities = 138/351 (39%), Positives = 180/351 (51%), Gaps = 80/351 (22%)

Query: 6   MLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGK 65
             + +LA  DPE++  I++E  RQ   IELIASENFTS AV+E  GS L NKY+EG PGK
Sbjct: 2   RSYASLADYDPEIFEAIQQELERQREHIELIASENFTSPAVMEAQGSDLTNKYAEGYPGK 61

Query: 66  RYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-------------------- 105
           RYYGG +++DE+E +A +R+ K F  +      NVQP+SG                    
Sbjct: 62  RYYGGCEYVDEVEELAIERAKKLFGAE----YANVQPHSGSQANQAVYLALLQPGDTIMG 117

Query: 106 ------------SPANFA-----VCEKALPTNNARFDF--------------LSSGTTCY 134
                       SP NF+     V    +       D+              + +G + Y
Sbjct: 118 LDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPETGLIDYDEVEKLAKEVKPKLIIAGGSAY 177

Query: 135 SRCLDYARFRQICDETDSIMFADMSHISGLIAGVKG-----------VTKTGEK------ 177
           SR +D+ RFR+I DE  + +  DM+H++GLIAG  G           VT T  K      
Sbjct: 178 SRPIDFKRFREIADEVGAYLMVDMAHVAGLIAG--GVHPNPLPHADVVTTTTHKTLRGPR 235

Query: 178 ---ILYDYEE---KINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASH 231
              IL + EE   KIN+AVFP LQGGP  H I A A A  +A   EFK Y  QV  NA  
Sbjct: 236 GGIILTNDEELAKKINSAVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKA 295

Query: 232 LSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
           L++ + +RG+ VV+GGTD HL+L+DLR   LTG K E  LE   I  NKN 
Sbjct: 296 LAEALKERGFKVVSGGTDNHLVLVDLRSKGLTGKKAEAALERAGITVNKNA 346

Length = 413

>gnl|CDD|240264 PTZ00094, PTZ00094, serine hydroxymethyltransferase; Provisional

 Score =  236 bits (604), Expect = 2e-74
 Identities = 102/268 (38%), Positives = 135/268 (50%), Gaps = 67/268 (25%)

Query: 130 GTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIAGVKG---------VTKTGEKIL- 179
           G + Y R +DY RFR+ICD   + + AD++H SGL+A             VT T  K L 
Sbjct: 189 GASAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPFPYADVVTTTTHKSLR 248

Query: 180 --------------YDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQV 225
                          D E KIN AVFP LQGGPHNH I AIA  + + QS E+K Y  QV
Sbjct: 249 GPRSGLIFYRKKVKPDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQV 308

Query: 226 KANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT--- 282
             NA  L+  + KRGY +VTGGTD HL+L+DLR   +TGSK+E +L+ + I+ NKNT   
Sbjct: 309 LKNAKALAAALEKRGYDLVTGGTDNHLVLVDLRPFGITGSKMEKLLDAVNISVNKNTIPG 368

Query: 283 ------------------------------------GISLAAEIQAISGPKLVDFQTCLH 306
                                                + LA EIQ   G KLVDF+  L 
Sbjct: 369 DKSALNPSGVRLGTPALTTRGAKEKDFKFVADFLDRAVKLAQEIQKQVGKKLVDFKKALE 428

Query: 307 KNEDIVKKVAALKKEIEDYSNQFEMPGQ 334
           KN ++ K    L++E+ ++++QF  PG 
Sbjct: 429 KNPELQK----LRQEVVEFASQFPFPGI 452

Length = 452

>gnl|CDD|240264 PTZ00094, PTZ00094, serine hydroxymethyltransferase; Provisional

 Score =  207 bits (528), Expect = 3e-63
 Identities = 76/103 (73%), Positives = 89/103 (86%)

Query: 10  TLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYG 69
           +L + DPELY LI+KEK RQI G+ELIASENFTS AVLECLGSC  NKY+EGLPG RYYG
Sbjct: 14  SLKEADPELYELIEKEKERQIEGLELIASENFTSRAVLECLGSCFTNKYAEGLPGNRYYG 73

Query: 70  GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112
           GN+ +D+IE + Q+R+L+AF LDPE+WG NVQPYSGSPANFAV
Sbjct: 74  GNEVVDKIENLCQKRALEAFGLDPEEWGVNVQPYSGSPANFAV 116

Length = 452

>gnl|CDD|99733 cd00378, SHMT, Serine-glycine hydroxymethyltransferase (SHMT)

 Score =  197 bits (503), Expect = 6e-60
 Identities = 77/174 (44%), Positives = 103/174 (59%), Gaps = 21/174 (12%)

Query: 130 GTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIAG------VKG---VTKTGEK--- 177
           G + Y R +D+ RFR+I DE  + +  DM+H++GL+AG      + G   VT T  K   
Sbjct: 168 GASAYPRPIDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLPGADVVTTTTHKTLR 227

Query: 178 ------ILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKAN 228
                 IL    +  +KIN+AVFP LQGGPH H I A A A+ +A   EFK+Y  QV  N
Sbjct: 228 GPRGGLILTRKGELAKKINSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVEN 287

Query: 229 ASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
           A  L++ + +RG+ VV+GGTD HL+L+DLR   +TG   E  LEE  I  NKNT
Sbjct: 288 AKALAEALKERGFKVVSGGTDNHLVLVDLRPKGITGKAAEDALEEAGITVNKNT 341

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites. Length = 402

>gnl|CDD|237280 PRK13034, PRK13034, serine hydroxymethyltransferase; Reviewed

 Score =  173 bits (440), Expect = 1e-50
 Identities = 80/176 (45%), Positives = 102/176 (57%), Gaps = 25/176 (14%)

Query: 130 GTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIAGVKG-----------VTKTGEK- 177
           G + Y R LD+ARFR+I DE  +++  DM+HI+GL+A   G           VT T  K 
Sbjct: 175 GFSAYPRELDFARFREIADEVGALLMVDMAHIAGLVAA--GEHPNPFPHAHVVTTTTHKT 232

Query: 178 --------ILYDYEE---KINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVK 226
                   IL + EE   KIN+AVFP LQGGP  H I A A A  +A   EFK+Y  QV 
Sbjct: 233 LRGPRGGMILTNDEEIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVI 292

Query: 227 ANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
           ANA  L++ + +RGY +V+GGTD HL+L+DLR   L+G   E  LE   I  NKNT
Sbjct: 293 ANAQALAEVLKERGYDLVSGGTDNHLLLVDLRPKGLSGKDAEQALERAGITVNKNT 348

Length = 416

>gnl|CDD|99733 cd00378, SHMT, Serine-glycine hydroxymethyltransferase (SHMT)

 Score =  164 bits (418), Expect = 2e-47
 Identities = 58/101 (57%), Positives = 72/101 (71%), Gaps = 4/101 (3%)

Query: 12  AQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGN 71
           A  DPE+  +IKKE  RQ   +ELIASENFTS AV+E +GS L NKY+EG PGKRYYGG 
Sbjct: 1   ADVDPEIAEIIKKENERQRETLELIASENFTSPAVMEAMGSDLTNKYAEGYPGKRYYGGC 60

Query: 72  QFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112
           +++DEIE +A +R+ K F  +      NVQP+SGS AN AV
Sbjct: 61  EYVDEIEDLAIERAKKLFGAE----YANVQPHSGSQANLAV 97

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites. Length = 402

>gnl|CDD|215153 PLN02271, PLN02271, serine hydroxymethyltransferase

 Score =  166 bits (422), Expect = 9e-47
 Identities = 64/102 (62%), Positives = 79/102 (77%)

Query: 11  LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG 70
           L + DP+++ L++KEK RQ  GIELIASENF   AV+E LGS L NKYSEG+PG RYY G
Sbjct: 129 LPEADPDIHELMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGMPGARYYTG 188

Query: 71  NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112
           NQ+ID+IE +  +R+L AF LD E+WG NVQPYS + ANFAV
Sbjct: 189 NQYIDQIERLCCERALAAFGLDSEKWGVNVQPYSCTSANFAV 230

Length = 586

>gnl|CDD|215153 PLN02271, PLN02271, serine hydroxymethyltransferase

 Score =  159 bits (403), Expect = 3e-44
 Identities = 105/299 (35%), Positives = 137/299 (45%), Gaps = 86/299 (28%)

Query: 114 EKALPTNNARFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIAGVKG--- 170
           EKAL   + R   L  G + Y R  DYARFRQI D+  +++  DM+HISGL+A  +    
Sbjct: 292 EKAL---DFRPKILICGGSSYPREWDYARFRQIADKCGAVLMCDMAHISGLVAAKECVNP 348

Query: 171 ------VTKTGEKIL-------------------------------YDYEEKINNAVFPS 193
                 VT T  K L                               YD+EEKIN AVFPS
Sbjct: 349 FDYCDIVTSTTHKSLRGPRGGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPS 408

Query: 194 LQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLI 253
           LQGGPHN+ I A+A A+ Q  + E+K+Y  QVK NA  L+  +++R   +VTGGTD HL+
Sbjct: 409 LQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQALASALLRRKCRLVTGGTDNHLL 468

Query: 254 LIDLRKNKLTGSKVELVLEEIAIACNK------NTGISL--------------------- 286
           L DL    LTG   E V E   I  NK      N  IS                      
Sbjct: 469 LWDLTTLGLTGKNYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTSRGCLESDFE 528

Query: 287 --------AAEIQAI----SGPKLVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPG 333
                   AA+I +      G    +F   L  N+DIV+    L+  +E +++QF MPG
Sbjct: 529 TIADFLLRAAQIASAVQREHGKLQKEFLKGLQNNKDIVE----LRNRVEAFASQFAMPG 583

Length = 586

>gnl|CDD|237280 PRK13034, PRK13034, serine hydroxymethyltransferase; Reviewed

 Score =  134 bits (340), Expect = 3e-36
 Identities = 57/108 (52%), Positives = 74/108 (68%), Gaps = 10/108 (9%)

Query: 8   HGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRY 67
             +L + D E+++ I KE  RQ + +ELIASENFTS AV+E  GS L NKY+EG PGKRY
Sbjct: 6   SDSLEEYDDEVFAAINKELERQQDHLELIASENFTSPAVMEAQGSVLTNKYAEGYPGKRY 65

Query: 68  YGGNQFIDEIEIVAQQRSLKAFNLDPEQWGC---NVQPYSGSPANFAV 112
           YGG +F+DE+E +A +R+ + F       GC   NVQP+SGS AN AV
Sbjct: 66  YGGCEFVDEVEALAIERAKQLF-------GCDYANVQPHSGSQANGAV 106

Length = 416

>gnl|CDD|184161 PRK13580, PRK13580, serine hydroxymethyltransferase; Provisional

 Score =  120 bits (302), Expect = 2e-30
 Identities = 62/179 (34%), Positives = 96/179 (53%), Gaps = 24/179 (13%)

Query: 127 LSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIAG--VKG----------VTKT 174
           L +G + Y R +++A+ R+I DE  +++  DM+H +GL+AG    G          VT T
Sbjct: 224 LVAGYSAYPRRVNFAKLREIADEVGAVLMVDMAHFAGLVAGKVFTGDEDPVPHADIVTTT 283

Query: 175 GEKILY-----------DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQA 223
             K L            +Y + ++    P + GGP  H + A A A+ +A++ EF+ Y  
Sbjct: 284 THKTLRGPRGGLVLAKKEYADAVDKGC-PLVLGGPLPHVMAAKAVALAEARTPEFQKYAQ 342

Query: 224 QVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
           QV  NA  L++  +KRG  +VTGGTD HL+LID+    LTG + E  L +  I  N+N+
Sbjct: 343 QVVDNARALAEGFLKRGARLVTGGTDNHLVLIDVTSFGLTGRQAESALLDAGIVTNRNS 401

Length = 493

>gnl|CDD|184161 PRK13580, PRK13580, serine hydroxymethyltransferase; Provisional

 Score = 80.5 bits (199), Expect = 9e-17
 Identities = 38/102 (37%), Positives = 60/102 (58%), Gaps = 10/102 (9%)

Query: 11  LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG 70
           +   +P +   I++E   Q + ++LIASEN++SLAV   +G+ L +KY+EG PG R+Y G
Sbjct: 30  ILHVEPRIAEAIRQELADQRSSLKLIASENYSSLAVQLAMGNLLTDKYAEGTPGHRFYAG 89

Query: 71  NQFIDEIEIVAQQRSLKAFNLDPEQWGCN---VQPYSGSPAN 109
            Q +D +E  A + + + F       G     VQP+SG+ AN
Sbjct: 90  CQNVDTVEWEAAEHAKELF-------GAEHAYVQPHSGADAN 124

Length = 493

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	337
KOG2467|consensus	477		100.0
COG0112	413	GlyA Glycine/serine hydroxymethyltransferase [Amin	100.0
PLN02271	586	serine hydroxymethyltransferase	100.0
PF00464	399	SHMT: Serine hydroxymethyltransferase; InterPro: I	100.0
PRK13580	493	serine hydroxymethyltransferase; Provisional	100.0
PLN03226	475	serine hydroxymethyltransferase; Provisional	100.0
PTZ00094	452	serine hydroxymethyltransferase; Provisional	100.0
PRK13034	416	serine hydroxymethyltransferase; Reviewed	100.0
PRK00011	416	glyA serine hydroxymethyltransferase; Reviewed	100.0
cd00378	402	SHMT Serine-glycine hydroxymethyltransferase (SHMT	100.0
COG0156	388	BioF 7-keto-8-aminopelargonate synthetase and rela	100.0
PLN02955	476	8-amino-7-oxononanoate synthase	99.95
KOG1359|consensus	417		99.94
KOG1360|consensus	570		99.94
PRK09064	407	5-aminolevulinate synthase; Validated	99.87
TIGR01821	402	5aminolev_synth 5-aminolevulinic acid synthase. Th	99.86
PRK13393	406	5-aminolevulinate synthase; Provisional	99.85
PRK13392	410	5-aminolevulinate synthase; Provisional	99.84
PLN02483	489	serine palmitoyltransferase	99.81
PRK07179	407	hypothetical protein; Provisional	99.81
PLN03227	392	serine palmitoyltransferase-like protein; Provisio	99.8
TIGR01822	393	2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A lig	99.79
PRK05937	370	8-amino-7-oxononanoate synthase; Provisional	99.78
PLN02822	481	serine palmitoyltransferase	99.77
COG0520	405	csdA Selenocysteine lyase/Cysteine desulfurase [Po	99.76
cd06454	349	KBL_like KBL_like; this family belongs to the pyri	99.69
COG1104	386	NifS Cysteine sulfinate desulfinase/cysteine desul	99.69
KOG1357|consensus	519		99.69
TIGR02539	370	SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation	99.68
PRK13238	460	tnaA tryptophanase/L-cysteine desulfhydrase, PLP-d	99.66
PRK10874	401	cysteine sulfinate desulfinase; Provisional	99.65
PF00266	371	Aminotran_5: Aminotransferase class-V; InterPro: I	99.64
TIGR03392	398	FeS_syn_CsdA cysteine desulfurase, catalytic subun	99.64
PRK09331	387	Sep-tRNA:Cys-tRNA synthetase; Provisional	99.62
TIGR03235	353	DNA_S_dndA cysteine desulfurase DndA. This model d	99.62
PRK09295	406	bifunctional cysteine desulfurase/selenocysteine l	99.62
TIGR01979	403	sufS cysteine desulfurases, SufS subfamily. This m	99.62
TIGR00858	360	bioF 8-amino-7-oxononanoate synthase. This model r	99.62
cd06451	356	AGAT_like Alanine-glyoxylate aminotransferase (AGA	99.61
cd00617	431	Tnase_like Tryptophanase family (Tnase). This fami	99.61
PRK02948	381	cysteine desulfurase; Provisional	99.6
TIGR03576	346	pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158	99.6
PRK06939	397	2-amino-3-ketobutyrate coenzyme A ligase; Provisio	99.6
PRK05958	385	8-amino-7-oxononanoate synthase; Reviewed	99.59
PF01276	417	OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain;	99.59
PRK13520	371	L-tyrosine decarboxylase; Provisional	99.58
TIGR01825	385	gly_Cac_T_rel pyridoxal phosphate-dependent acyltr	99.57
TIGR01977	376	am_tr_V_EF2568 cysteine desulfurase family protein	99.57
PLN02855	424	Bifunctional selenocysteine lyase/cysteine desulfu	99.56
cd06453	373	SufS_like Cysteine desulfurase (SufS)-like. This f	99.56
PLN02651	364	cysteine desulfurase	99.55
PRK13237	460	tyrosine phenol-lyase; Provisional	99.51
cd00611	355	PSAT_like Phosphoserine aminotransferase (PSAT) fa	99.5
TIGR02326	363	transamin_PhnW 2-aminoethylphosphonate--pyruvate t	99.5
TIGR03402	379	FeS_nifS cysteine desulfurase NifS. Members of thi	99.5
TIGR01814	406	kynureninase kynureninase. This model describes ky	99.49
TIGR01976	397	am_tr_V_VC1184 cysteine desulfurase family protein	99.47
TIGR02006	402	IscS cysteine desulfurase IscS. This model represe	99.45
cd06452	361	SepCysS Sep-tRNA:Cys-tRNA synthase. This family be	99.44
TIGR03812	373	tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Membe	99.43
PLN02409	401	serine--glyoxylate aminotransaminase	99.43
PRK15029	755	arginine decarboxylase; Provisional	99.42
TIGR03403	382	nifS_epsilon cysteine desulfurase, NifS family, ep	99.42
cd06502	338	TA_like Low-specificity threonine aldolase (TA). T	99.41
TIGR02618	450	tyr_phenol_ly tyrosine phenol-lyase. This model de	99.4
cd00616	352	AHBA_syn 3-amino-5-hydroxybenzoic acid synthase fa	99.39
PRK13479	368	2-aminoethylphosphonate--pyruvate transaminase; Pr	99.37
PRK02769	380	histidine decarboxylase; Provisional	99.37
TIGR01366	361	serC_3 phosphoserine aminotransferase, putative. T	99.36
cd00615	294	Orn_deC_like Ornithine decarboxylase family. This	99.36
PRK07505	402	hypothetical protein; Provisional	99.36
PLN02724	805	Molybdenum cofactor sulfurase	99.36
PRK15400	714	lysine decarboxylase CadA; Provisional	99.33
TIGR01437	363	selA_rel uncharacterized pyridoxal phosphate-depen	99.33
KOG1549|consensus	428		99.32
TIGR03301	355	PhnW-AepZ 2-aminoethylphosphonate aminotransferase	99.32
PRK15399	713	lysine decarboxylase LdcC; Provisional	99.31
KOG1358|consensus	467		99.28
PRK13578	720	ornithine decarboxylase; Provisional	99.27
COG0075	383	Serine-pyruvate aminotransferase/archaeal aspartat	99.23
PRK11658	379	UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate amin	99.23
PRK14012	404	cysteine desulfurase; Provisional	99.23
TIGR03588	380	PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-amin	99.22
PLN03032	374	serine decarboxylase; Provisional	99.22
TIGR01364	349	serC_1 phosphoserine aminotransferase. This model	99.21
PRK00854	401	rocD ornithine--oxo-acid transaminase; Reviewed	99.21
TIGR01788	431	Glu-decarb-GAD glutamate decarboxylase. This model	99.19
COG2008	342	GLY1 Threonine aldolase [Amino acid transport and	99.18
PRK05355	360	3-phosphoserine/phosphohydroxythreonine aminotrans	99.17
TIGR03246	397	arg_catab_astC succinylornithine transaminase fami	99.17
PRK10534	333	L-threonine aldolase; Provisional	99.16
cd06450	345	DOPA_deC_like DOPA decarboxylase family. This fami	99.15
PRK04366	481	glycine dehydrogenase subunit 2; Validated	99.14
PLN02721	353	threonine aldolase	99.14
COG1982	557	LdcC Arginine/lysine/ornithine decarboxylases [Ami	99.13
PRK03080	378	phosphoserine aminotransferase; Provisional	99.12
TIGR01885	401	Orn_aminotrans ornithine aminotransferase. This mo	99.12
cd00613	398	GDC-P Glycine cleavage system P-protein, alpha- an	99.12
PRK05968	389	hypothetical protein; Provisional	99.11
cd00614	369	CGS_like CGS_like: Cystathionine gamma-synthase is	99.1
PF01041	363	DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransfe	99.08
PRK06767	386	methionine gamma-lyase; Provisional	99.08
COG0399	374	WecE Predicted pyridoxal phosphate-dependent enzym	99.07
cd00609	350	AAT_like Aspartate aminotransferase family. This f	99.07
TIGR01328	391	met_gam_lyase methionine gamma-lyase. This model d	99.05
PLN02452	365	phosphoserine transaminase	99.05
PLN02242	418	methionine gamma-lyase	99.05
TIGR01324	377	cysta_beta_ly_B cystathionine beta-lyase, bacteria	99.03
TIGR01141	346	hisC histidinol-phosphate aminotransferase. Histid	99.03
PTZ00125	400	ornithine aminotransferase-like protein; Provision	99.0
PRK04073	396	rocD ornithine--oxo-acid transaminase; Provisional	99.0
PRK03244	398	argD acetylornithine aminotransferase; Provisional	99.0
PRK07504	398	O-succinylhomoserine sulfhydrylase; Reviewed	98.97
PRK02731	367	histidinol-phosphate aminotransferase; Validated	98.97
PRK05387	353	histidinol-phosphate aminotransferase; Provisional	98.95
PRK03321	352	putative aminotransferase; Provisional	98.92
TIGR00707	379	argD acetylornithine and succinylornithine aminotr	98.92
PRK04311	464	selenocysteine synthase; Provisional	98.91
PRK00950	361	histidinol-phosphate aminotransferase; Validated	98.91
TIGR01325	380	O_suc_HS_sulf O-succinylhomoserine sulfhydrylase.	98.91
PLN02414	993	glycine dehydrogenase (decarboxylating)	98.89
PRK03715	395	argD acetylornithine transaminase protein; Provisi	98.88
PRK01278	389	argD acetylornithine transaminase protein; Provisi	98.88
TIGR00474	454	selA seryl-tRNA(sec) selenium transferase. In bact	98.88
PRK08574	385	cystathionine gamma-synthase; Provisional	98.87
COG0076	460	GadB Glutamate decarboxylase and related PLP-depen	98.87
PRK02936	377	argD acetylornithine aminotransferase; Provisional	98.87
PRK15407	438	lipopolysaccharide biosynthesis protein RfbH; Prov	98.86
PRK06225	380	aspartate aminotransferase; Provisional	98.86
PRK06108	382	aspartate aminotransferase; Provisional	98.86
PRK05093	403	argD bifunctional N-succinyldiaminopimelate-aminot	98.85
cd00610	413	OAT_like Acetyl ornithine aminotransferase family.	98.85
PRK08133	390	O-succinylhomoserine sulfhydrylase; Validated	98.85
PRK12381	406	bifunctional succinylornithine transaminase/acetyl	98.83
PRK09082	386	methionine aminotransferase; Validated	98.82
PRK06460	376	hypothetical protein; Provisional	98.82
PRK07810	403	O-succinylhomoserine sulfhydrylase; Provisional	98.81
PRK06234	400	methionine gamma-lyase; Provisional	98.81
PRK07503	403	methionine gamma-lyase; Provisional	98.8
TIGR02379	376	ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase	98.79
PRK08249	398	cystathionine gamma-synthase; Provisional	98.78
PRK03317	368	histidinol-phosphate aminotransferase; Provisional	98.78
TIGR03540	383	DapC_direct LL-diaminopimelate aminotransferase. T	98.77
PRK08361	391	aspartate aminotransferase; Provisional	98.76
PRK03158	359	histidinol-phosphate aminotransferase; Provisional	98.75
PRK14807	351	histidinol-phosphate aminotransferase; Provisional	98.75
PRK12566	954	glycine dehydrogenase; Provisional	98.74
PRK12414	384	putative aminotransferase; Provisional	98.74
TIGR01329	378	cysta_beta_ly_E cystathionine beta-lyase, eukaryot	98.73
PLN02624	474	ornithine-delta-aminotransferase	98.73
PRK07812	436	O-acetylhomoserine aminocarboxypropyltransferase;	98.72
PLN03026	380	histidinol-phosphate aminotransferase; Provisional	98.71
PRK11706	375	TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisio	98.71
PRK08064	390	cystathionine beta-lyase; Provisional	98.71
PRK07811	388	cystathionine gamma-synthase; Provisional	98.7
PRK05613	437	O-acetylhomoserine aminocarboxypropyltransferase;	98.69
PF00155	363	Aminotran_1_2: Aminotransferase class I and II 1-a	98.69
PRK07550	386	hypothetical protein; Provisional	98.68
PRK08153	369	histidinol-phosphate aminotransferase; Provisional	98.68
PRK07682	378	hypothetical protein; Validated	98.67
PLN02509	464	cystathionine beta-lyase	98.63
PRK01533	366	histidinol-phosphate aminotransferase; Validated	98.63
TIGR00461	939	gcvP glycine dehydrogenase (decarboxylating). This	98.63
PRK05764	393	aspartate aminotransferase; Provisional	98.62
PRK08861	388	cystathionine gamma-synthase; Provisional	98.62
PRK08114	395	cystathionine beta-lyase; Provisional	98.61
PRK07050	394	cystathionine beta-lyase; Provisional	98.61
PRK08912	387	hypothetical protein; Provisional	98.61
PRK04870	356	histidinol-phosphate aminotransferase; Provisional	98.61
PRK00451	447	glycine dehydrogenase subunit 1; Validated	98.61
PRK05957	389	aspartate aminotransferase; Provisional	98.61
KOG1368|consensus	384		98.61
PRK07777	387	aminotransferase; Validated	98.6
PRK06434	384	cystathionine gamma-lyase; Validated	98.59
PLN00175	413	aminotransferase family protein; Provisional	98.59
PRK07582	366	cystathionine gamma-lyase; Validated	98.59
PRK08134	433	O-acetylhomoserine aminocarboxypropyltransferase;	98.58
TIGR03539	357	DapC_actino succinyldiaminopimelate transaminase.	98.58
PRK09276	385	LL-diaminopimelate aminotransferase; Provisional	98.57
PRK07683	387	aminotransferase A; Validated	98.57
PRK08117	433	4-aminobutyrate aminotransferase; Provisional	98.57
PRK08776	405	cystathionine gamma-synthase; Provisional	98.56
PRK07309	391	aromatic amino acid aminotransferase; Validated	98.55
PRK14808	335	histidinol-phosphate aminotransferase; Provisional	98.55
PRK08960	387	hypothetical protein; Provisional	98.55
PRK07865	364	N-succinyldiaminopimelate aminotransferase; Review	98.55
PRK06084	425	O-acetylhomoserine aminocarboxypropyltransferase;	98.54
TIGR01140	330	L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxy	98.54
PLN02263	470	serine decarboxylase	98.54
TIGR02080	382	O_succ_thio_ly O-succinylhomoserine (thiol)-lyase.	98.54
PRK09105	370	putative aminotransferase; Provisional	98.53
PRK02627	396	acetylornithine aminotransferase; Provisional	98.53
PRK08045	386	cystathionine gamma-synthase; Provisional	98.53
PRK04635	354	histidinol-phosphate aminotransferase; Provisional	98.51
PRK05367	954	glycine dehydrogenase; Provisional	98.5
PRK05939	397	hypothetical protein; Provisional	98.5
PRK09028	394	cystathionine beta-lyase; Provisional	98.49
PRK00062	426	glutamate-1-semialdehyde aminotransferase; Provisi	98.48
PRK07681	399	aspartate aminotransferase; Provisional	98.48
TIGR01265	403	tyr_nico_aTase tyrosine/nicotianamine aminotransfe	98.48
TIGR03537	350	DapC succinyldiaminopimelate transaminase. Note: t	98.47
PLN02880	490	tyrosine decarboxylase	98.46
COG0079	356	HisC Histidinol-phosphate/aromatic aminotransferas	98.45
PRK05994	427	O-acetylhomoserine aminocarboxypropyltransferase;	98.45
PRK06702	432	O-acetylhomoserine aminocarboxypropyltransferase;	98.44
PRK08056	356	threonine-phosphate decarboxylase; Provisional	98.44
TIGR02617	467	tnaA_trp_ase tryptophanase, leader peptide-associa	98.44
PRK05942	394	aspartate aminotransferase; Provisional	98.44
PRK07324	373	transaminase; Validated	98.43
PRK07269	364	cystathionine gamma-synthase; Reviewed	98.43
PRK07908	349	hypothetical protein; Provisional	98.43
PRK07337	388	aminotransferase; Validated	98.43
PLN02760	504	4-aminobutyrate:pyruvate transaminase	98.42
PRK08068	389	transaminase; Reviewed	98.42
PRK05967	395	cystathionine beta-lyase; Provisional	98.41
COG1103	382	Archaea-specific pyridoxal phosphate-dependent enz	98.39
PRK06348	384	aspartate aminotransferase; Provisional	98.39
PRK08247	366	cystathionine gamma-synthase; Reviewed	98.38
PRK07671	377	cystathionine beta-lyase; Provisional	98.36
PRK01688	351	histidinol-phosphate aminotransferase; Provisional	98.35
TIGR01326	418	OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model d	98.35
PF01053	386	Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent	98.34
PRK11522	459	putrescine--2-oxoglutarate aminotransferase; Provi	98.33
PRK06290	410	aspartate aminotransferase; Provisional	98.33
PRK04612	408	argD acetylornithine transaminase protein; Provisi	98.32
TIGR03531	444	selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium tr	98.31
COG1168	388	MalY Bifunctional PLP-dependent enzyme with beta-c	98.31
PLN02590	539	probable tyrosine decarboxylase	98.31
PRK08248	431	O-acetylhomoserine aminocarboxypropyltransferase;	98.3
PRK12462	364	phosphoserine aminotransferase; Provisional	98.29
PRK06176	380	cystathionine gamma-synthase/cystathionine beta-ly	98.28
TIGR03372	442	putres_am_tran putrescine aminotransferase. Member	98.28
KOG2862|consensus	385		98.26
COG0626	396	MetC Cystathionine beta-lyases/cystathionine gamma	98.25
PRK14809	357	histidinol-phosphate aminotransferase; Provisional	98.25
PLN00144	382	acetylornithine transaminase	98.25
PF00282	373	Pyridoxal_deC: Pyridoxal-dependent decarboxylase c	98.24
KOG1383|consensus	491		98.23
PRK08175	395	aminotransferase; Validated	98.21
PRK05166	371	histidinol-phosphate aminotransferase; Provisional	98.2
PRK08363	398	alanine aminotransferase; Validated	98.2
PRK04260	375	acetylornithine aminotransferase; Provisional	98.19
PRK07366	388	succinyldiaminopimelate transaminase; Validated	98.19
PRK06173	429	adenosylmethionine--8-amino-7-oxononanoate transam	98.18
PRK12403	460	putative aminotransferase; Provisional	98.18
PRK06959	339	putative threonine-phosphate decarboxylase; Provis	98.18
COG0001	432	HemL Glutamate-1-semialdehyde aminotransferase [Co	98.18
PRK09148	405	aminotransferase; Validated	98.17
PLN02414	993	glycine dehydrogenase (decarboxylating)	98.17
COG4992	404	ArgD Ornithine/acetylornithine aminotransferase [A	98.17
PRK04781	364	histidinol-phosphate aminotransferase; Provisional	98.16
COG3844	407	Kynureninase [Amino acid transport and metabolism]	98.16
TIGR01264	401	tyr_amTase_E tyrosine aminotransferase, eukaryotic	98.15
PLN02656	409	tyrosine transaminase	98.14
TIGR00508	427	bioA adenosylmethionine-8-amino-7-oxononanoate tra	98.12
PRK05664	330	threonine-phosphate decarboxylase; Reviewed	98.1
PRK00615	433	glutamate-1-semialdehyde aminotransferase; Provisi	98.1
PLN00145	430	tyrosine/nicotianamine aminotransferase; Provision	98.08
TIGR01365	374	serC_2 phosphoserine aminotransferase, Methanosarc	98.06
PRK07986	428	adenosylmethionine--8-amino-7-oxononanoate transam	98.05
PRK06358	354	threonine-phosphate decarboxylase; Provisional	98.04
PRK06082	459	4-aminobutyrate aminotransferase; Provisional	98.04
PRK08636	403	aspartate aminotransferase; Provisional	98.03
PRK06149	972	hypothetical protein; Provisional	98.03
PRK07049	427	methionine gamma-lyase; Validated	98.01
PRK06107	402	aspartate aminotransferase; Provisional	98.01
COG0436	393	Aspartate/tyrosine/aromatic aminotransferase [Amin	97.99
PRK07590	409	L,L-diaminopimelate aminotransferase; Validated	97.99
PF01212	290	Beta_elim_lyase: Beta-eliminating lyase; InterPro:	97.98
TIGR00713	423	hemL glutamate-1-semialdehyde-2,1-aminomutase. Thi	97.97
PRK05964	423	adenosylmethionine--8-amino-7-oxononanoate transam	97.96
PRK02610	374	histidinol-phosphate aminotransferase; Provisional	97.96
PRK06207	405	aspartate aminotransferase; Provisional	97.96
PRK15481	431	transcriptional regulatory protein PtsJ; Provision	97.91
PRK13360	442	omega amino acid--pyruvate transaminase; Provision	97.9
cd01494	170	AAT_I Aspartate aminotransferase (AAT) superfamily	97.9
TIGR03542	402	DAPAT_plant LL-diaminopimelate aminotransferase. T	97.89
PRK06425	332	histidinol-phosphate aminotransferase; Validated	97.88
PRK07392	360	threonine-phosphate decarboxylase; Validated	97.88
PTZ00433	412	tyrosine aminotransferase; Provisional	97.87
PLN02482	474	glutamate-1-semialdehyde 2,1-aminomutase	97.86
PRK06209	431	glutamate-1-semialdehyde 2,1-aminomutase; Provisio	97.86
PRK03967	337	histidinol-phosphate aminotransferase; Provisional	97.85
COG3033	471	TnaA Tryptophanase [Amino acid transport and metab	97.85
TIGR03799	522	NOD_PanD_pyr putative pyridoxal-dependent aspartat	97.85
PRK06105	460	aminotransferase; Provisional	97.83
PLN00143	409	tyrosine/nicotianamine aminotransferase; Provision	97.83
PRK09265	404	aminotransferase AlaT; Validated	97.81
PRK04013	364	argD acetylornithine/acetyl-lysine aminotransferas	97.81
PRK09221	445	beta alanine--pyruvate transaminase; Provisional	97.79
PLN02376	496	1-aminocyclopropane-1-carboxylate synthase	97.75
PLN02187	462	rooty/superroot1	97.75
TIGR03538	393	DapC_gpp succinyldiaminopimelate transaminase. Thi	97.75
PRK06062	451	hypothetical protein; Provisional	97.74
PRK05630	422	adenosylmethionine--8-amino-7-oxononanoate transam	97.69
PTZ00377	481	alanine aminotransferase; Provisional	97.67
PRK12389	428	glutamate-1-semialdehyde aminotransferase; Provisi	97.66
PRK07568	397	aspartate aminotransferase; Provisional	97.66
PRK06836	394	aspartate aminotransferase; Provisional	97.66
PRK06541	460	hypothetical protein; Provisional	97.65
COG2873	426	MET17 O-acetylhomoserine sulfhydrylase [Amino acid	97.6
PRK05367	954	glycine dehydrogenase; Provisional	97.59
KOG0053|consensus	409		97.56
COG0160	447	GabT 4-aminobutyrate aminotransferase and related	97.56
PRK08593	445	4-aminobutyrate aminotransferase; Provisional	97.56
PRK07046	453	aminotransferase; Validated	97.54
PF03841	367	SelA: L-seryl-tRNA selenium transferase; InterPro:	97.54
PRK05769	441	4-aminobutyrate aminotransferase; Provisional	97.54
COG1921	395	SelA Selenocysteine synthase [seryl-tRNASer seleni	97.48
COG1003	496	GcvP Glycine cleavage system protein P (pyridoxal-	97.47
PRK09147	396	succinyldiaminopimelate transaminase; Provisional	97.4
PRK08354	311	putative aminotransferase; Provisional	97.39
PRK13355	517	bifunctional HTH-domain containing protein/aminotr	97.37
PRK09264	425	diaminobutyrate--2-oxoglutarate aminotransferase;	97.37
KOG0257|consensus	420		97.36
PLN02231	534	alanine transaminase	97.35
TIGR00699	464	GABAtrns_euk 4-aminobutyrate aminotransferase, euk	97.31
PF06838	403	Met_gamma_lyase: Methionine gamma-lyase ; InterPro	97.26
PRK05639	457	4-aminobutyrate aminotransferase; Provisional	97.21
PLN02672	1082	methionine S-methyltransferase	97.17
PLN02450	468	1-aminocyclopropane-1-carboxylate synthase	97.17
PRK07678	451	aminotransferase; Validated	97.11
PRK07481	449	hypothetical protein; Provisional	97.1
TIGR03251	431	LAT_fam L-lysine 6-transaminase. Characterized mem	97.06
TIGR02407	412	ectoine_ectB diaminobutyrate--2-oxoglutarate amino	97.04
PRK08360	443	4-aminobutyrate aminotransferase; Provisional	97.04
PRK05839	374	hypothetical protein; Provisional	96.98
PRK06058	443	4-aminobutyrate aminotransferase; Provisional	96.97
COG0161	449	BioA Adenosylmethionine-8-amino-7-oxononanoate ami	96.97
TIGR03811	608	tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcu	96.96
PLN02607	447	1-aminocyclopropane-1-carboxylate synthase	96.95
PRK08297	443	L-lysine aminotransferase; Provisional	96.88
PRK06916	460	adenosylmethionine--8-amino-7-oxononanoate transam	96.83
PRK07036	466	hypothetical protein; Provisional	96.8
PRK06917	447	hypothetical protein; Provisional	96.78
PRK07482	461	hypothetical protein; Provisional	96.76
PRK09792	421	4-aminobutyrate transaminase; Provisional	96.76
PRK07495	425	4-aminobutyrate aminotransferase; Provisional	96.74
PRK06777	421	4-aminobutyrate aminotransferase; Provisional	96.73
COG1448	396	TyrB Aspartate/tyrosine/aromatic aminotransferase	96.71
PRK06938	464	diaminobutyrate--2-oxoglutarate aminotransferase;	96.64
PRK07483	443	hypothetical protein; Provisional	96.63
TIGR00461	939	gcvP glycine dehydrogenase (decarboxylating). This	96.57
PRK05965	459	hypothetical protein; Provisional	96.55
PRK07480	456	putative aminotransferase; Validated	96.5
TIGR00709	442	dat 2,4-diaminobutyrate 4-transaminases. This fami	96.41
PRK06943	453	adenosylmethionine--8-amino-7-oxononanoate transam	96.39
KOG2040|consensus	1001		96.34
KOG0629|consensus	510		96.31
TIGR00700	420	GABAtrnsam 4-aminobutyrate aminotransferase, proka	96.31
PRK09440	416	avtA valine--pyruvate transaminase; Provisional	96.3
COG1167	459	ARO8 Transcriptional regulators containing a DNA-b	96.23
PRK08088	425	4-aminobutyrate aminotransferase; Validated	96.21
COG3977	417	Alanine-alpha-ketoisovalerate (or valine-pyruvate)	96.14
KOG1404|consensus	442		96.12
PRK08742	472	adenosylmethionine--8-amino-7-oxononanoate transam	96.09
PRK06148	1013	hypothetical protein; Provisional	96.02
PRK09275	527	aspartate aminotransferase; Provisional	95.99
PF05889	389	SLA_LP_auto_ag: Soluble liver antigen/liver pancre	95.97
PRK06918	451	4-aminobutyrate aminotransferase; Reviewed	95.95
PRK06855	433	aminotransferase; Validated	95.91
TIGR03801	521	asp_4_decarbox aspartate 4-decarboxylase. This enz	95.86
KOG1401|consensus	433		95.83
PRK07030	466	adenosylmethionine--8-amino-7-oxononanoate transam	95.82
COG4100	416	Cystathionine beta-lyase family protein involved i	95.8
COG1932	365	SerC Phosphoserine aminotransferase [Coenzyme meta	95.57
PRK06931	459	diaminobutyrate--2-oxoglutarate aminotransferase;	95.49
PF00202	339	Aminotran_3: Aminotransferase class-III; InterPro:	94.64
KOG1402|consensus	427		94.3
PLN02974	817	adenosylmethionine-8-amino-7-oxononanoate transami	93.65
KOG0259|consensus	447		92.08
KOG3846|consensus	465		91.67
KOG0256|consensus	471		91.3
PF02347	429	GDC-P: Glycine cleavage system P-protein; InterPro	91.2
KOG0633|consensus	375		90.66
KOG0628|consensus	511		90.48
KOG1405|consensus	484		88.91
PLN02397	423	aspartate transaminase	88.61
PTZ00376	404	aspartate aminotransferase; Provisional	86.51
PLN02368	407	alanine transaminase	86.13
PRK12566	954	glycine dehydrogenase; Provisional	85.79
KOG1403|consensus	452		84.21

>KOG2467|consensus

Probab=100.00  E-value=5.6e-91  Score=648.16  Aligned_cols=333  Identities=54%  Similarity=0.869  Sum_probs=307.3

Q ss_pred             chhhhhhhhhhcHHHHHHHHHHHhhcccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHH
Q psy10669          4 STMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQ   83 (337)
Q Consensus         4 ~~~~~~~l~~~d~~~~~~~~~e~~rq~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~   83 (337)
                      .+|.+.+|.+.|||++++|++|++||+++|+||||||++|.+|++|++|+|+|||+||+||.|||+|++++|++|.+||+
T Consensus        14 ~~~~~~~l~~~DPev~~ii~~Ek~RQ~~gieLIaSENFts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~   93 (477)
T KOG2467|consen   14 IKLGNTPLEEVDPEVHDIIEKEKERQKRGIELIASENFTSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQK   93 (477)
T ss_pred             hhhhcCchhhcChHHHHHHHHHHHhhhcceeEeecccchHHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHHH
Confidence            36778899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc--------------------------------------------
Q psy10669         84 RSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT--------------------------------------------  119 (337)
Q Consensus        84 ~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~--------------------------------------------  119 (337)
                      |+.++|+++++.||+||||.||++||++||+||++|                                            
T Consensus        94 RALeaF~ldp~kWGVNVQp~SGSPANfavYtall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~T  173 (477)
T KOG2467|consen   94 RALEAFGLDPEKWGVNVQPYSGSPANFAVYTALLKPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPST  173 (477)
T ss_pred             HHHHHhCCCHHHCceeeccCCCCchhhHHHhhhcCCCCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCC
Confidence            999999999999999999999999999999999876                                            


Q ss_pred             ---------ccc---cccEEEEcCcccccccChHHHHHHhhhcCCeEEEeccccccccc------------eeeeec---
Q psy10669        120 ---------NNA---RFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA------------GVKGVT---  172 (337)
Q Consensus       120 ---------~~a---~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~------------g~~~T~---  172 (337)
                               +.+   +||+||+|.|.|++++||+++++||+++||+||+|+||++||++            .|++|+   
T Consensus       174 G~IDYD~Le~~A~~frPk~iiaG~SaY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey~DiVTTTTHKs  253 (477)
T KOG2467|consen  174 GYIDYDKLEKTATLFRPKLIIAGTSAYSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEYCDIVTTTTHKS  253 (477)
T ss_pred             CceehHHHHHHHHhcCCcEEEeccccchhhccHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcccccceeecccccc
Confidence                     122   49999999999999999999999999999999999999999999            244443   


Q ss_pred             ---cCCchhh-----------------hhHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHH
Q psy10669        173 ---KTGEKIL-----------------YDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHL  232 (337)
Q Consensus       173 ---~~Gg~i~-----------------~~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l  232 (337)
                         |+||+|+                 +|++++||+++||++||+||+|.|+|+|+|++++.+|+|++|++||++|+++|
T Consensus       254 LRGPRg~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~~Nakal  333 (477)
T KOG2467|consen  254 LRGPRGAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKEYQKQVLKNAKAL  333 (477)
T ss_pred             ccCCcceeEEEeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcchHHHHHHHHHhhCCHHHHHHHHHHHHHHHHH
Confidence               3577774                 25889999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCc-----------ccchhhhhHhhhCCCHHHH
Q psy10669        233 SDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT-----------GISLAAEIQAISGPKLVDF  301 (337)
Q Consensus       233 ~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~-----------girig~~~~t~~G~~~~~~  301 (337)
                      +++|.++|+++++||||||+++||+++.|++|..+++.|+.++|.+|||+           |||||||++|+||+.++||
T Consensus       334 a~~l~~~Gy~lvtgGTDnHlvLvDLr~~G~dGarvE~vle~~~I~~NKNtvpGD~Sal~PgGiRiGtPAmTsRG~~e~df  413 (477)
T KOG2467|consen  334 ASALISRGYKLVTGGTDNHLVLVDLRPKGVDGARVEKVLELCHIALNKNTVPGDKSALSPGGIRIGTPAMTSRGFGEEDF  413 (477)
T ss_pred             HHHHHHcCceEecCCccceEEEEeccccCCchHHHHHHHHHhhhhhcCCcCCCCccccCCCceeccchhhcccCccHHHH
Confidence            99999999999999999999999999999999999999999999999999           9999999999999998887


Q ss_pred             HHH-------------H----------------hhCCCcHHHHHHHHHHHHHHHhcCCCCCCCC
Q psy10669        302 QTC-------------L----------------HKNEDIVKKVAALKKEIEDYSNQFEMPGQAD  336 (337)
Q Consensus       302 ~~~-------------~----------------~~~~~~~~~~~~lr~~V~~~~~~fp~p~~~~  336 (337)
                      ...             +                ..+..-.+++.+||++|++|+.+||+|++++
T Consensus       414 ~~v~~fi~~av~i~~~~~~~~~~~~lkdf~~~~~~~~~~~~~v~~Lr~~Ve~fa~~fp~pg~~~  477 (477)
T KOG2467|consen  414 EKVADFIDRAVKIALEIQKEAGGKKLKDFKKFLSENKVMSEEVAELRKRVEEFAGQFPMPGFET  477 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcccchHHHHHHHhccCchhHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence            541             0                0111113578999999999999999999864

>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=1.7e-88  Score=640.67  Aligned_cols=319  Identities=45%  Similarity=0.678  Sum_probs=299.5

Q ss_pred             hhhhhhcHHHHHHHHHHHhhcccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhh
Q psy10669          9 GTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKA   88 (337)
Q Consensus         9 ~~l~~~d~~~~~~~~~e~~rq~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~l   88 (337)
                      ..|.+.||+|+++|++|..||+++|+|||||||+||.|++|++|.|+|||+||+||.|||+||+++|++|.+|++|+++|
T Consensus         5 ~~l~~~d~~i~~~i~~e~~rq~~~ieLIASEN~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~L   84 (413)
T COG0112           5 ASLADYDPEIFEAIQQELERQREHIELIASENFTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKL   84 (413)
T ss_pred             hhHHhcCHHHHHHHHHHHHHHhhceeeeeccccCCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHH
Confidence            57888999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------------------------c
Q psy10669         89 FNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------------------------N  120 (337)
Q Consensus        89 fg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------------------------~  120 (337)
                      ||+++    +||||+||++||++||.||++|                                                +
T Consensus        85 Fga~~----anVQPhSGs~AN~av~~All~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~et~~IDyD~~~k  160 (413)
T COG0112          85 FGAEY----ANVQPHSGSQANQAVYLALLQPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPETGLIDYDEVEK  160 (413)
T ss_pred             hCCCc----cccCCCCchHHHHHHHHHHcCCCCeEecccCCCCCcccCCCCCCccceeEEeEecccccccCccCHHHHHH
Confidence            99998    7999999999999999999876                                                2


Q ss_pred             cc---cccEEEEcCcccccccChHHHHHHhhhcCCeEEEeccccccccce------------eeeec------cCCchhh
Q psy10669        121 NA---RFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIAG------------VKGVT------KTGEKIL  179 (337)
Q Consensus       121 ~a---~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~g------------~~~T~------~~Gg~i~  179 (337)
                      ++   |||+||+|.|.|++.+|++++++|||++||+||+|+||.+|||++            +++|+      |+||+|+
T Consensus       161 ~a~e~kPK~ii~G~SaY~r~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~AdvVTtTTHKTlrGPrGG~Il  240 (413)
T COG0112         161 LAKEVKPKLIIAGGSAYSRPIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPHADVVTTTTHKTLRGPRGGIIL  240 (413)
T ss_pred             HHHHhCCCEEEECccccccccCHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCCccceEeCCcccCCCCCCceEEE
Confidence            22   499999999999999999999999999999999999999999993            44443      4799999


Q ss_pred             h---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEE
Q psy10669        180 Y---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILID  256 (337)
Q Consensus       180 ~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~  256 (337)
                      +   ++.++||+++||++||+||+|.|||+++|++|+++++|++|++||++||++|++.|.++||+|++|+||||+++||
T Consensus       241 ~~~eel~kkin~aVFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~G~~vvsGgTdnHl~lVD  320 (413)
T COG0112         241 TNDEELAKKINSAVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKERGFKVVSGGTDNHLVLVD  320 (413)
T ss_pred             eccHHHHHHhhhhcCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHcCCeEecCCccceEEEEE
Confidence            7   5899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ecCCCcchHHHHHHHhhcCceeccCc------------ccchhhhhHhhhCCCHHHHHH------HHhhCCCcHHHHHHH
Q psy10669        257 LRKNKLTGSKVELVLEEIAIACNKNT------------GISLAAEIQAISGPKLVDFQT------CLHKNEDIVKKVAAL  318 (337)
Q Consensus       257 ~~~~~~~~~~~~~~L~~~gI~v~~~~------------girig~~~~t~~G~~~~~~~~------~~~~~~~~~~~~~~l  318 (337)
                      +++.+++|..++..|+++||.+|||.            ||||||+++|+|||+.+||.+      .++.+.+  +.++++
T Consensus       321 l~~~~~~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~~~--~~~~~v  398 (413)
T COG0112         321 LRSKGLTGKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDGLK--DVPAEV  398 (413)
T ss_pred             cccCCCCHHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHhccc--hhHHHH
Confidence            99888999999999999999999999            999999999999999888765      3455433  567899


Q ss_pred             HHHHHHHHhcCCCCC
Q psy10669        319 KKEIEDYSNQFEMPG  333 (337)
Q Consensus       319 r~~V~~~~~~fp~p~  333 (337)
                      |++|.+||.+||+|+
T Consensus       399 k~~V~~l~~~fp~y~  413 (413)
T COG0112         399 KEEVAELCRRFPLYK  413 (413)
T ss_pred             HHHHHHHHHhCCCCC
Confidence            999999999999974

>PLN02271 serine hydroxymethyltransferase

Probab=100.00  E-value=4.3e-81  Score=621.52  Aligned_cols=332  Identities=48%  Similarity=0.743  Sum_probs=305.5

Q ss_pred             hhhhhhhhhhcHHHHHHHHHHHhhcccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHH
Q psy10669          5 TMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQR   84 (337)
Q Consensus         5 ~~~~~~l~~~d~~~~~~~~~e~~rq~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~   84 (337)
                      .|.++.|++.||||+++|++|++||+++|+|||||||+||.|+++++|+|+|||++|+||+|||+||+++|+||.+|++|
T Consensus       123 ~~~~~~l~~~Dpei~~li~~E~~rQ~~~l~LIASEN~~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~er  202 (586)
T PLN02271        123 AWGNQPLPEADPDIHELMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCER  202 (586)
T ss_pred             HHHhccHhhhCHHHHHHHHHHHHHHhcCeeeccccccCCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHH
Confidence            47777899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc---------------------------------------------
Q psy10669         85 SLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT---------------------------------------------  119 (337)
Q Consensus        85 ~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~---------------------------------------------  119 (337)
                      ++++||+++++||+||||+||++||+++|.||++|                                             
T Consensus       203 a~~lF~~~~~~~gaNVQp~SGs~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~  282 (586)
T PLN02271        203 ALAAFGLDSEKWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQT  282 (586)
T ss_pred             HHHHhCCcccccccceeeccHHHHHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEccccccc
Confidence            99999999999999999999999999999999765                                             


Q ss_pred             ---------ccc---cccEEEEcCcccccccChHHHHHHhhhcCCeEEEeccccccccce------------eeeec---
Q psy10669        120 ---------NNA---RFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIAG------------VKGVT---  172 (337)
Q Consensus       120 ---------~~a---~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~g------------~~~T~---  172 (337)
                               +++   +||+||+++|+|++.+|+++|++||+++|++||||+||++|+|++            +++|+   
T Consensus       283 g~IDyd~lek~a~~~rPKLII~g~Saypr~~D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~~~aDvvt~TTHKt  362 (586)
T PLN02271        283 GYIDYDKLEEKALDFRPKILICGGSSYPREWDYARFRQIADKCGAVLMCDMAHISGLVAAKECVNPFDYCDIVTSTTHKS  362 (586)
T ss_pred             CccCHHHHHHHhhhcCCeEEEECchhccCcCCHHHHHHHHHHcCCEEEEECcccccccccCcCCCCCcCCcEEEeCCccc
Confidence                     112   399999999999999999999999999999999999999999972            45554   


Q ss_pred             ---cCCchhhh-h---------------------HHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHH
Q psy10669        173 ---KTGEKILY-D---------------------YEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKA  227 (337)
Q Consensus       173 ---~~Gg~i~~-~---------------------l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~  227 (337)
                         |+||+|++ +                     +.++|++++||+++|+||+|.|||++++++++..++|++|++||++
T Consensus       363 LrGPrGG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~efk~Ya~QVv~  442 (586)
T PLN02271        363 LRGPRGGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKK  442 (586)
T ss_pred             CCCCCceEEEecccccccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChHHHHHHHHHHH
Confidence               46888875 2                     6789999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCc-----------ccchhhhhHhhhCC
Q psy10669        228 NASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT-----------GISLAAEIQAISGP  296 (337)
Q Consensus       228 na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~-----------girig~~~~t~~G~  296 (337)
                      ||++|++.|.+.||+|++|+||||+++||++..+++|..+++.|+++||.+|||.           ||||||+++|+||+
T Consensus       443 NAkaLA~~L~~~G~~vv~ggTdnHlvLvDl~~~g~~G~~ae~~Le~~~I~~Nkn~iP~d~~~~~psGiRiGT~alT~rG~  522 (586)
T PLN02271        443 NAQALASALLRRKCRLVTGGTDNHLLLWDLTTLGLTGKNYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTSRGC  522 (586)
T ss_pred             HHHHHHHHHHHCCCeEeeCCCCcceeeecCcccCCCHHHHHHHHHHcCeEeccccCCCCCCCCCCCcccccCHHHHhcCC
Confidence            9999999999999999999999999999999999999999999999999999987           99999999999999


Q ss_pred             CHHHHHH------HHhh--------------C----CCcHHHHHHHHHHHHHHHhcCCCCCCCC
Q psy10669        297 KLVDFQT------CLHK--------------N----EDIVKKVAALKKEIEDYSNQFEMPGQAD  336 (337)
Q Consensus       297 ~~~~~~~------~~~~--------------~----~~~~~~~~~lr~~V~~~~~~fp~p~~~~  336 (337)
                      +.+||.+      .+++              +    ..+.+++.++|++|++||++||+|++|.
T Consensus       523 ~e~d~~~iA~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~V~~~~~~fp~p~~~~  586 (586)
T PLN02271        523 LESDFETIADFLLRAAQIASAVQREHGKLQKEFLKGLQNNKDIVELRNRVEAFASQFAMPGFDV  586 (586)
T ss_pred             CcHHHHHHHHHHHHHHhhhhhhhhhcchhhhhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            9777754      2222              1    0234568999999999999999998864

>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []

Probab=100.00  E-value=1.6e-76  Score=574.89  Aligned_cols=294  Identities=49%  Similarity=0.756  Sum_probs=249.7

Q ss_pred             hhhhcHHHHHHHHHHHhhcccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcC
Q psy10669         11 LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFN   90 (337)
Q Consensus        11 l~~~d~~~~~~~~~e~~rq~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg   90 (337)
                      |+++||||+++|++|.+||+++|+|||||||+||.|+++++|+|+|||++|+||.|||+||+++|++|.+|+++++++||
T Consensus         1 l~~~d~ei~~li~~e~~rq~~~l~LiaSEN~~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~   80 (399)
T PF00464_consen    1 LKEFDPEIYELIEKEEERQRSTLNLIASENYMSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFG   80 (399)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHSEE-CTT-----HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT
T ss_pred             CcccCHHHHHHHHHHHHHHhcCccccCcccccCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhC
Confidence            57899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCcceeecCCCchhHHHHHHhhCCc---------------------------------------------------
Q psy10669         91 LDPEQWGCNVQPYSGSPANFAVCEKALPT---------------------------------------------------  119 (337)
Q Consensus        91 ~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~---------------------------------------------------  119 (337)
                      +++.+|++||||+||++||++||.||++|                                                   
T Consensus        81 ~~~~~w~anvqp~SGs~An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~  160 (399)
T PF00464_consen   81 AEPKEWYANVQPHSGSQANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDE  160 (399)
T ss_dssp             -STTTEEEE---SSHHHHHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHH
T ss_pred             CCcccceEEeecCCchHHHHHHHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHH
Confidence            99999999999999999999999999876                                                   


Q ss_pred             --ccc---cccEEEEcCcccccccChHHHHHHhhhcCCeEEEeccccccccce------------ee-eec-----cCCc
Q psy10669        120 --NNA---RFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIAG------------VK-GVT-----KTGE  176 (337)
Q Consensus       120 --~~a---~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~g------------~~-~T~-----~~Gg  176 (337)
                        +++   +||+||+|+|+|++++|+++|++|||++|++||+|+||.+|||++            ++ +||     |+||
T Consensus       161 l~~~a~~~kPklIi~G~S~y~~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~~ADvvt~sThKtl~GPrgg  240 (399)
T PF00464_consen  161 LEKLAKEHKPKLIICGASSYPRPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFPYADVVTGSTHKTLRGPRGG  240 (399)
T ss_dssp             HHHHHHHH--SEEEEE-SSTSS---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCCTSSEEEEESSGGG-SSS-E
T ss_pred             HHHHHhhcCCCEEEECchhccCccCHHHHHHHHHhcCcEEEecccccccceehheecCccccceEEEeeccccccccCce
Confidence              222   399999999999999999999999999999999999999999993            34 444     5799


Q ss_pred             hhhhh----------------HHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC
Q psy10669        177 KILYD----------------YEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG  240 (337)
Q Consensus       177 ~i~~~----------------l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G  240 (337)
                      +|++.                +.++|++++||++||+||+|.+||++++++|+++++|++|++||++||++|++.|.+.|
T Consensus       241 iI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La~~L~~~G  320 (399)
T PF00464_consen  241 IILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALAEALQERG  320 (399)
T ss_dssp             EEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence            99865                78899999999999999999999999999999999999999999999999999999999


Q ss_pred             CEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCc-----------ccchhhhhHhhhCCCHHHHHHH
Q psy10669        241 YHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT-----------GISLAAEIQAISGPKLVDFQTC  304 (337)
Q Consensus       241 ~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~-----------girig~~~~t~~G~~~~~~~~~  304 (337)
                      |+|++++||||+++||+++.++++.+++++|+++||.+|+|.           ||||||+++|+||++.+||.+.
T Consensus       321 ~~v~~ggTd~H~vlvd~~~~~~~g~~a~~~Le~~gI~vnkn~iP~d~~~~~~sGlRlGT~~lT~rG~~e~dm~~i  395 (399)
T PF00464_consen  321 FKVVTGGTDNHQVLVDLRSFGIDGKEAEKALEEAGIIVNKNTIPGDRSPFVPSGLRLGTPALTRRGMKEEDMKEI  395 (399)
T ss_dssp             -EEGGGS-SSSEEEEEGGGGTS-HHHHHHHHHHTTEE-EEE--TTTSTTTT-SEEEEESHHHHHTT--HHHHHHH
T ss_pred             cEEEECCCCCCeEEEEecccccchHHHHHHHHhcCeeecccccCCCCCCCCCCEEEECCHHHHhCCCCHHHHHHH
Confidence            999999999999999999999999999999999999999986           9999999999999999999864

The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....

>PRK13580 serine hydroxymethyltransferase; Provisional

Probab=100.00  E-value=4.1e-67  Score=519.31  Aligned_cols=321  Identities=33%  Similarity=0.546  Sum_probs=289.2

Q ss_pred             hhhhhhcHHHHHHHHHHHhhcccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhh
Q psy10669          9 GTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKA   88 (337)
Q Consensus         9 ~~l~~~d~~~~~~~~~e~~rq~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~l   88 (337)
                      +.|.++||||+++|++|.+||+++|+|||||||+||.|+++++++++|||++|+||.|||+||+++|++|.+|+++++++
T Consensus        28 ~~l~~~d~~~~~~~~~e~~rq~~~l~LiasEN~~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~l  107 (493)
T PRK13580         28 DVILHVEPRIAEAIRQELADQRSSLKLIASENYSSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKEL  107 (493)
T ss_pred             HHHHhhCHHHHHHHHHHHHHHhcCceEecccccCCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHH
Confidence            56889999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCcceeecCCCchhHHHHHHhhCC---------------------------------c----------------
Q psy10669         89 FNLDPEQWGCNVQPYSGSPANFAVCEKALP---------------------------------T----------------  119 (337)
Q Consensus        89 fg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~---------------------------------~----------------  119 (337)
                      ||+++    +||||+||++||++||.||++                                 +                
T Consensus       108 f~a~~----anvqp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg  183 (493)
T PRK13580        108 FGAEH----AYVQPHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHG  183 (493)
T ss_pred             hCCCc----ccccCCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecC
Confidence            99998    799999999999999999983                                 1                


Q ss_pred             ------------------------------ccc---cccEEEEcCcccccccChHHHHHHhhhcCCeEEEeccccccccc
Q psy10669        120 ------------------------------NNA---RFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA  166 (337)
Q Consensus       120 ------------------------------~~a---~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~  166 (337)
                                                    +++   +|++||++.|+|++.+|+++|++||+++|++|+||+||++|+++
T Consensus       184 ~~~n~~~~~~~~~~y~vd~~~g~iD~d~l~~~~~~~~plvii~g~S~~~~~~dl~~i~eia~~~gA~L~VD~AH~~Glig  263 (493)
T PRK13580        184 FRPNISGKMFHQRSYGVDPDTGLLDYDEIAALAREFKPLILVAGYSAYPRRVNFAKLREIADEVGAVLMVDMAHFAGLVA  263 (493)
T ss_pred             cccchhhheeeeEecccCcccCccCHHHHHHHHhhcCCEEEEeCccccCCCcCHHHHHHHHHHcCCEEEEECchhhceec
Confidence                                          111   28899999999999999999999999999999999999999998


Q ss_pred             e---------------eeeec------cCCchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHH
Q psy10669        167 G---------------VKGVT------KTGEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQA  223 (337)
Q Consensus       167 g---------------~~~T~------~~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~  223 (337)
                      +               +++|+      |.||+|++  ++.++++++ .|+++|+|++|.+||++++++++.+++|++|++
T Consensus       264 g~~~~~~~~~~~~~D~vtgT~hKaL~GP~GG~I~~~~~l~~~L~~a-~P~i~gg~l~p~iAA~avAl~e~~~~ef~~y~~  342 (493)
T PRK13580        264 GKVFTGDEDPVPHADIVTTTTHKTLRGPRGGLVLAKKEYADAVDKG-CPLVLGGPLPHVMAAKAVALAEARTPEFQKYAQ  342 (493)
T ss_pred             cccchhhcCCCCCCcEEEeCChhhccCCCeEEEEecHHHHHHHhhC-CCcccCCCccHHHHHHHHHHHHHhCccHHHHHH
Confidence            2               24554      35899987  688889877 599999999999999999999998888899999


Q ss_pred             HHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCc------------ccchhhhhH
Q psy10669        224 QVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT------------GISLAAEIQ  291 (337)
Q Consensus       224 ~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~------------girig~~~~  291 (337)
                      |+++|+++|++.|.+.||++++++|+|||++|++++.+.++..+++.|+++||+||++.            +||||+++.
T Consensus       343 ~l~~Na~~La~~L~~~G~~vv~ggTdshIV~V~lg~~~~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg~~A~  422 (493)
T PRK13580        343 QVVDNARALAEGFLKRGARLVTGGTDNHLVLIDVTSFGLTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLGTPAL  422 (493)
T ss_pred             HHHHHHHHHHHHHHhcCCCccCCCCCCCEEEEEeCCHHHHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEEeccchh
Confidence            99999999999999999999877799999999999988778899999999999999865            799999999


Q ss_pred             hhhCCCHHHHHH------HHhhCC----------------CcHHHHHHHHHHHHHHHhcCCC-CCC
Q psy10669        292 AISGPKLVDFQT------CLHKNE----------------DIVKKVAALKKEIEDYSNQFEM-PGQ  334 (337)
Q Consensus       292 t~~G~~~~~~~~------~~~~~~----------------~~~~~~~~lr~~V~~~~~~fp~-p~~  334 (337)
                      |+||++.+|+..      .++++.                .+.+.++++|++|.+||.+||+ |++
T Consensus       423 ttrg~teedi~~iad~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~~~  488 (493)
T PRK13580        423 TTLGMGSDEMDEVAELIVKVLSNTTPGTTAEGAPSKAKYELDEGVAQEVRARVAELLARFPLYPEI  488 (493)
T ss_pred             hhcCCCHHHHHHHHHHHHHHHHhhhhccccccccccccccCCHHHHHHHHHHHHHHHHhCCCCCcc
Confidence            999999887754      233321                1345688999999999999999 444

>PLN03226 serine hydroxymethyltransferase; Provisional

Probab=100.00  E-value=8.1e-66  Score=515.23  Aligned_cols=332  Identities=52%  Similarity=0.840  Sum_probs=298.0

Q ss_pred             chhhhhhhhhhcHHHHHHHHHHHhhcccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHH
Q psy10669          4 STMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQ   83 (337)
Q Consensus         4 ~~~~~~~l~~~d~~~~~~~~~e~~rq~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~   83 (337)
                      +.|++..|++.||||+++|++|.+||+++|+|||||||+||.|++++++.+++||++|+||+|||+||+.+|+||.+|++
T Consensus         8 ~~~~~~~~~~~d~~~~~~i~~e~~~q~~~l~liasen~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~   87 (475)
T PLN03226          8 PKWGNAPLEEVDPEIADIIEKEKRRQWKGLELIASENFTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQK   87 (475)
T ss_pred             hhcchhhhhhcCHHHHHHHHHHHHHHHcCeeEecCCccCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHH
Confidence            34677789999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc--------------------------------------------
Q psy10669         84 RSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT--------------------------------------------  119 (337)
Q Consensus        84 ~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~--------------------------------------------  119 (337)
                      +++++|+++++.|++|+||+|||+||++++.+|+++                                            
T Consensus        88 ~~~~~f~~~~~~~~~nv~~~SG~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~~~  167 (475)
T PLN03226         88 RALEAFRLDPEKWGVNVQPLSGSPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDEST  167 (475)
T ss_pred             HHHHHhCCCcceeEEecCcCchHHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecCCC
Confidence            999999999999999999999999999999999765                                            


Q ss_pred             ---------ccc---cccEEEEcCcccccccChHHHHHHhhhcCCeEEEeccccccccc------------eeeeec---
Q psy10669        120 ---------NNA---RFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA------------GVKGVT---  172 (337)
Q Consensus       120 ---------~~a---~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~------------g~~~T~---  172 (337)
                               ++.   +||+||+++|+|||++|+++|++||+++|++|+||+||++|+++            .+++|+   
T Consensus       168 g~iD~d~Le~~l~~~~pklIv~~~S~~s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p~~~~Div~~t~hK~  247 (475)
T PLN03226        168 GLIDYDKLEKKAMLFRPKLIIAGASAYPRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAASPFEYCDVVTTTTHKS  247 (475)
T ss_pred             CCcCHHHHHHHHhhcCCeEEEEecCcCCCccCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCCCCCCeEEEecCccc
Confidence                     111   28999998999999999999999999999999999999999997            134553   


Q ss_pred             ---cCCchhhh----------------hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHH
Q psy10669        173 ---KTGEKILY----------------DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLS  233 (337)
Q Consensus       173 ---~~Gg~i~~----------------~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~  233 (337)
                         |.||+|++                ++.++++++.||.++|+|+++.++|++++++++.++++++|++++++|+++|+
T Consensus       248 L~GP~Gg~I~~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~  327 (475)
T PLN03226        248 LRGPRGGMIFFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALA  327 (475)
T ss_pred             ccCCCceEEEEchhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHH
Confidence               35888875                23447888999999999999999999999999988888999999999999999


Q ss_pred             HHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCc-----------ccchhhhhHhhhCCCHHHHH
Q psy10669        234 DEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT-----------GISLAAEIQAISGPKLVDFQ  302 (337)
Q Consensus       234 ~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~-----------girig~~~~t~~G~~~~~~~  302 (337)
                      +.|.+.||++++++|++|+++|+++..++++.++++.|+++||.+|+|.           |||+||+.+|+||++.+||.
T Consensus       328 ~~L~~~G~~l~~~~t~~hi~lv~~~~~gi~~~~~~~~L~~~~I~~nk~~~p~~~~~~~~~giRiGt~~lt~~g~~~~d~~  407 (475)
T PLN03226        328 NRLMSKGYKLVTGGTDNHLVLWDLRPLGLTGSRVEKVLDLAHITLNKNAVPGDSSALVPGGVRIGTPAMTSRGLVEKDFE  407 (475)
T ss_pred             HHHHhCCCEEEcCCCCCCEEEEEccCCCCCHHHHHHHHHHCCCEECCCCCCCCcccCCCCCcccCcHHHHHCCCCHHHHH
Confidence            9999999999998899999999999889999999999999999999974           99999999999999987765


Q ss_pred             H------HHhh--------------CCC-----c--HHHHHHHHHHHHHHHhcCCCCCCC
Q psy10669        303 T------CLHK--------------NED-----I--VKKVAALKKEIEDYSNQFEMPGQA  335 (337)
Q Consensus       303 ~------~~~~--------------~~~-----~--~~~~~~lr~~V~~~~~~fp~p~~~  335 (337)
                      +      .+++              +..     +  .+.+.++|++|.+||++||+|+++
T Consensus       408 ~ia~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~fp~~~~~  467 (475)
T PLN03226        408 KVAEFLHRAVTIALKIQKEHGKKLKDFKKGLESNDFSKDIEALRAEVEEFATSFPMPGFD  467 (475)
T ss_pred             HHHHHHHHHHHHhhhhhhhcccchhhhhhhccccccHHHHHHHHHHHHHHHHhCCCCCCC
Confidence            4      2222              100     1  356889999999999999999875

>PTZ00094 serine hydroxymethyltransferase; Provisional

Probab=100.00  E-value=3.5e-53  Score=422.96  Aligned_cols=327  Identities=52%  Similarity=0.869  Sum_probs=287.3

Q ss_pred             hhhhhhhcHHHHHHHHHHHhhcccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHh
Q psy10669          8 HGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLK   87 (337)
Q Consensus         8 ~~~l~~~d~~~~~~~~~e~~rq~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~   87 (337)
                      +..|+++|||+++++.+|.+||+++|+|+||||++||.|++++.+.+.++|++|+||++++.|++..+.+|..|++++++
T Consensus        12 ~~~~~~~d~~~~~~~~~~~~~~~~~l~l~~sen~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~   91 (452)
T PTZ00094         12 NQSLKEADPELYELIEKEKERQIEGLELIASENFTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALE   91 (452)
T ss_pred             hhhHhhhCHHHHHHHHHHHHHHHcCeeEecccccCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHH
Confidence            45688999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------------------------
Q psy10669         88 AFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------------------------  119 (337)
Q Consensus        88 lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------------------------  119 (337)
                      +||+++.+|.++++|+|||.||++++.+|+++                                                
T Consensus        92 lf~a~~~~~~~~~~~~sgt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~id~  171 (452)
T PTZ00094         92 AFGLDPEEWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNEKGLIDY  171 (452)
T ss_pred             HhCCCcccceeecCCCchHHHHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccCCCCCcCH
Confidence            99999888888999999999999999999654                                                


Q ss_pred             ----ccc---cccEEEEcCcccccccChHHHHHHhhhcCCeEEEeccccccccc------------eeeeec------cC
Q psy10669        120 ----NNA---RFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA------------GVKGVT------KT  174 (337)
Q Consensus       120 ----~~a---~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~------------g~~~T~------~~  174 (337)
                          +..   +|++|+++.|+|++.+|+++|.+||+++|++++||+||++|+++            .+++|+      |+
T Consensus       172 ~~L~~~l~~~~~~lvi~~~s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~~~~D~l~~S~hK~l~GP~  251 (452)
T PTZ00094        172 DKLEELAKAFRPKLIIAGASAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPFPYADVVTTTTHKSLRGPR  251 (452)
T ss_pred             HHHHHHHHHhCCCEEEEeCCCCCCccCHHHHHHHHHHcCCEEEEeccchhccccCCCCCCCCCCCcEEEcCCccCCCCCC
Confidence                000   37889988899999999999999999999999999999999995            234443      35


Q ss_pred             Cchhhh--h----HHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCC
Q psy10669        175 GEKILY--D----YEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGT  248 (337)
Q Consensus       175 Gg~i~~--~----l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t  248 (337)
                      ||++++  +    +.+.+++.+||.++|+++++.++|++++++++...++++|++++.+|+++|++.|.+.|+++.++++
T Consensus       252 Gg~l~~~~~~~~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~g~~v~~~~~  331 (452)
T PTZ00094        252 SGLIFYRKKVKPDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKRGYDLVTGGT  331 (452)
T ss_pred             ceEEEEecccchHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhCCcEEecCCC
Confidence            777765  2    4556777889999999999999999999999977788999999999999999999999999987667


Q ss_pred             CCeEEEEEecCCCcchHHHHHHHhhcCceeccC-----------cccchhhhhHhhhCCCHHHHHH------HHhhC---
Q psy10669        249 DVHLILIDLRKNKLTGSKVELVLEEIAIACNKN-----------TGISLAAEIQAISGPKLVDFQT------CLHKN---  308 (337)
Q Consensus       249 ~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~-----------~girig~~~~t~~G~~~~~~~~------~~~~~---  308 (337)
                      ++|+++|+++..++++..+...|+++||.++++           .+||+|+...|++|++.+|+..      .++..   
T Consensus       332 ~~~~~~v~~~~~~~~~~~~~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l~~~l~~~~~~~~~  411 (452)
T PTZ00094        332 DNHLVLVDLRPFGITGSKMEKLLDAVNISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFKFVADFLDRAVKLAQE  411 (452)
T ss_pred             CCceEeecCCcCCCCHHHHHHHHHHCCcEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHHHHHHHHHHHHHHHhh
Confidence            789999999988889999999999999999865           2899999999999999887654      22221   


Q ss_pred             ----------C-----CcHHHHHHHHHHHHHHHhcCCCCCC
Q psy10669        309 ----------E-----DIVKKVAALKKEIEDYSNQFEMPGQ  334 (337)
Q Consensus       309 ----------~-----~~~~~~~~lr~~V~~~~~~fp~p~~  334 (337)
                                .     .+..++.++|.+|.+||++||+|+.
T Consensus       412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~  452 (452)
T PTZ00094        412 IQKQVGKKLVDFKKALEKNPELQKLRQEVVEFASQFPFPGI  452 (452)
T ss_pred             hhhhcccchhhhhhhcccHHHHHHHHHHHHHHHHhCCCCCC
Confidence                      0     1246689999999999999999974

>PRK13034 serine hydroxymethyltransferase; Reviewed

Probab=100.00  E-value=5.1e-52  Score=410.52  Aligned_cols=323  Identities=44%  Similarity=0.671  Sum_probs=282.3

Q ss_pred             hhhhhhhhhcHHHHHHHHHHHhhcccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHH
Q psy10669          6 MLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRS   85 (337)
Q Consensus         6 ~~~~~l~~~d~~~~~~~~~e~~rq~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~   85 (337)
                      ||.+.|+++||||+++|++|.+||+++|||+|||||+||.|++|+.+.+.++|+.|++|+|+++|+..++++|.+|++++
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~sen~~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~l   83 (416)
T PRK13034          4 FFSDSLEEYDDEVFAAINKELERQQDHLELIASENFTSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERA   83 (416)
T ss_pred             hhhhhHhhhCHHHHHHHHHHHHHHhcCeeecccccCCCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHH
Confidence            55678999999999999999999999999999999999999999999988999999999999999999999999999999


Q ss_pred             HhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc----------------------------------------------
Q psy10669         86 LKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT----------------------------------------------  119 (337)
Q Consensus        86 a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~----------------------------------------------  119 (337)
                      +++||.++    +.+.+.|||.||++++.+|+++                                              
T Consensus        84 a~l~g~~~----alv~~~SG~~A~~~~l~al~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~  159 (416)
T PRK13034         84 KQLFGCDY----ANVQPHSGSQANGAVYLALLKPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDRLTGLIDYDE  159 (416)
T ss_pred             HHHhCCCc----eEEecCCcHHHHHHHHHHhcCCCCEEEEcCccceeeeecCCcceeccceeeeEEcccccccCCcCHHH
Confidence            99999997    4577899999999999999765                                              


Q ss_pred             --ccc---cccEEEEcCcccccccChHHHHHHhhhcCCeEEEeccccccccc-e-----------eeeec------cCCc
Q psy10669        120 --NNA---RFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA-G-----------VKGVT------KTGE  176 (337)
Q Consensus       120 --~~a---~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-g-----------~~~T~------~~Gg  176 (337)
                        +..   +||+|++++++|++++|+++|.++|+++|++|++|+||++|+++ |           +++|.      +.||
T Consensus       160 le~~l~~~~~klVi~~~~~~g~~~dl~~l~~la~~~g~~livD~Aha~G~~~~g~~~~~~~~~Di~~~s~~K~l~g~~GG  239 (416)
T PRK13034        160 VEELAKEHKPKLIIAGFSAYPRELDFARFREIADEVGALLMVDMAHIAGLVAAGEHPNPFPHAHVVTTTTHKTLRGPRGG  239 (416)
T ss_pred             HHHHHhhcCCeEEEECCCccccccCHHHHHHHHHHcCCEEEEeCcccccCcccCCCCCCCCCceEEEEeCcccCCCCCCe
Confidence              000   27899998889999999999999999999999999999999986 1           23332      4588


Q ss_pred             hhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEE
Q psy10669        177 KILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLI  253 (337)
Q Consensus       177 ~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v  253 (337)
                      ++++   ++.++++..+|++++++++++.+++++.++.+++++++.+|++++++|+++|+++|.+.|+++..+++++|++
T Consensus       240 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~G~~~~~~~~~t~i~  319 (416)
T PRK13034        240 MILTNDEEIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKERGYDLVSGGTDNHLL  319 (416)
T ss_pred             EEEECcHHHHHHHHhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHcCCEeccCCCCCcEE
Confidence            8876   3567788889999999999999999999999987666678999999999999999999999997545899999


Q ss_pred             EEEecCCCcchHHHHHHHhhcCceeccCc------------ccchhhhhHhhhCCCHHHHHH------HHhhCCCcHHHH
Q psy10669        254 LIDLRKNKLTGSKVELVLEEIAIACNKNT------------GISLAAEIQAISGPKLVDFQT------CLHKNEDIVKKV  315 (337)
Q Consensus       254 ~V~~~~~~~~~~~~~~~L~~~gI~v~~~~------------girig~~~~t~~G~~~~~~~~------~~~~~~~~~~~~  315 (337)
                      +|++++.+.+...+.++|+++||.++++.            +||+|+.++|++|.+.+|+..      .++.+.++.+.+
T Consensus       320 ~v~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~~~~~~~~~~~~  399 (416)
T PRK13034        320 LVDLRPKGLSGKDAEQALERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWILDVLDDLGNAALE  399 (416)
T ss_pred             EEEcCCCCCCHHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHHHHHhcCCCHHHH
Confidence            99999988888888899999999998632            899999999999999877654      344443434457


Q ss_pred             HHHHHHHHHHHhcCCCC
Q psy10669        316 AALKKEIEDYSNQFEMP  332 (337)
Q Consensus       316 ~~lr~~V~~~~~~fp~p  332 (337)
                      +++|++|.+|++.||++
T Consensus       400 ~~~~~~~~~~~~~~~~~  416 (416)
T PRK13034        400 QRVRKEVKALCSRFPIY  416 (416)
T ss_pred             HHHHHHHHHHHHhCCCC
Confidence            89999999999999975

>PRK00011 glyA serine hydroxymethyltransferase; Reviewed

Probab=100.00  E-value=1.2e-38  Score=314.45  Aligned_cols=324  Identities=43%  Similarity=0.659  Sum_probs=273.4

Q ss_pred             hhhhhhhhhcHHHHHHHHHHHhhcccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHH
Q psy10669          6 MLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRS   85 (337)
Q Consensus         6 ~~~~~l~~~d~~~~~~~~~e~~rq~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~   85 (337)
                      ||+..|++.|||++++|++|.+++++.|+|+++||+++|.|++++...+.++|+.|++|++++.|.+..+.+|..+++.+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~l   80 (416)
T PRK00011          1 FFMDNLAEYDPEIADAIEQELKRQEEHIELIASENFVSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRA   80 (416)
T ss_pred             CcchhhhhcCHHHHHHHHHHHHHHhcCeeeecccCcCCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHH
Confidence            56788999999999999999999999999999999999999999988878899999999999999999999999999999


Q ss_pred             HhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc----------------------------------------------
Q psy10669         86 LKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT----------------------------------------------  119 (337)
Q Consensus        86 a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~----------------------------------------------  119 (337)
                      +++||+++    ..|.++|||.|+..++.+++++                                              
T Consensus        81 a~~~g~~~----~~i~~~sgt~al~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~  156 (416)
T PRK00011         81 KELFGAEY----ANVQPHSGSQANAAVYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGLIDYDE  156 (416)
T ss_pred             HHHhCCCc----eeeecCCchHHHHHHHHHhcCCCCEEEEeccccCCccccccccccccceeeEeecCcCcccCCcCHHH
Confidence            99999987    4588889999998888888654                                              


Q ss_pred             -c--c-c-cccEEEEcCcccccccChHHHHHHhhhcCCeEEEeccccccccc------------eeeeec------cCCc
Q psy10669        120 -N--N-A-RFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA------------GVKGVT------KTGE  176 (337)
Q Consensus       120 -~--~-a-~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~------------g~~~T~------~~Gg  176 (337)
                       +  + . +||+|+++.+++|+..|+++|.++|+++|+++++|+||.+|++.            .+++++      ++||
T Consensus       157 l~~~i~~~~~k~v~~~~~~~~~~~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~~~di~~~S~~K~l~g~~gg  236 (416)
T PRK00011        157 VEKLALEHKPKLIIAGASAYSRPIDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVPHADVVTTTTHKTLRGPRGG  236 (416)
T ss_pred             HHHHHHhcCCCEEEECCCcCCCccCHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCCCCcEEEecCCcCCCCCCce
Confidence             0  1 1 27899987789999999999999999999999999999998763            122332      3578


Q ss_pred             hhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEE
Q psy10669        177 KILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLI  253 (337)
Q Consensus       177 ~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v  253 (337)
                      ++++   ++.++++...+|+..+++..+.++++..++.+++....+++.+++.+|++++++.|.+.|+++..+++++|++
T Consensus       237 ~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~  316 (416)
T PRK00011        237 LILTNDEELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAERGFRVVSGGTDNHLV  316 (416)
T ss_pred             EEEeCCHHHHHHHHHHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCCCeeeecCCCCeEE
Confidence            7775   4777887777888888899999999999988876545588999999999999999999999887545678999


Q ss_pred             EEEecCCCcchHHHHHHHhhcCceeccC------------cccchhhhhHhhhCCCHHHHHH------HHhhCCCcHHHH
Q psy10669        254 LIDLRKNKLTGSKVELVLEEIAIACNKN------------TGISLAAEIQAISGPKLVDFQT------CLHKNEDIVKKV  315 (337)
Q Consensus       254 ~V~~~~~~~~~~~~~~~L~~~gI~v~~~------------~girig~~~~t~~G~~~~~~~~------~~~~~~~~~~~~  315 (337)
                      ++.+++.+.+..++.+.|.+.||.++..            .++|+|+...+++|++.+|+..      .++.++.+.+++
T Consensus       317 ~i~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~~~~~~~~~~  396 (416)
T PRK00011        317 LVDLRSKGLTGKEAEAALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIADVLDNPDDEAVI  396 (416)
T ss_pred             EEeCcccCCCHHHHHHHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHHHhccCcchhH
Confidence            9999766667788889999899999831            1799999998889988766543      344554445779


Q ss_pred             HHHHHHHHHHHhcCCCCC
Q psy10669        316 AALKKEIEDYSNQFEMPG  333 (337)
Q Consensus       316 ~~lr~~V~~~~~~fp~p~  333 (337)
                      .++|+||.+|+++||.+.
T Consensus       397 ~~~~~~~~~~~~~~~~~~  414 (416)
T PRK00011        397 EEVKEEVKELCKRFPLYK  414 (416)
T ss_pred             HHHHHHHHHHHHhCCCCC
Confidence            999999999999999765

>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT)

Probab=100.00  E-value=5.2e-35  Score=286.76  Aligned_cols=310  Identities=45%  Similarity=0.694  Sum_probs=257.8

Q ss_pred             hhhcHHHHHHHHHHHhhcccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCC
Q psy10669         12 AQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNL   91 (337)
Q Consensus        12 ~~~d~~~~~~~~~e~~rq~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~   91 (337)
                      +++|+|++++|.+|.++|+++|+|+|+||+++|.|++++...+..+|+.|++|+++|.|....+++|..++++++++||+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~   80 (402)
T cd00378           1 ADVDPEIAEIIKKENERQRETLELIASENFTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGA   80 (402)
T ss_pred             CCcCHHHHHHHHHHHHHHHhCeeeeccCCcCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCC
Confidence            46899999999999999999999999999999999999998888899999999999999999999999888899999999


Q ss_pred             CCCCCcceeecCCCchhHHHHHHhhCCc-------------------------------------c--------------
Q psy10669         92 DPEQWGCNVQPYSGSPANFAVCEKALPT-------------------------------------N--------------  120 (337)
Q Consensus        92 ~~~~~~~~v~~~Sgt~AN~~v~~aLl~~-------------------------------------~--------------  120 (337)
                      ++    ..|.++||+.|+..++.+++++                                     .              
T Consensus        81 ~~----~~v~~~sgt~a~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~  156 (402)
T cd00378          81 EY----ANVQPHSGSQANLAVYFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKM  156 (402)
T ss_pred             Cc----eeeecCCcHHHHHHHHHHhcCCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHH
Confidence            86    4688889999999999998654                                     0              


Q ss_pred             c--ccccEEEEcCcccccccChHHHHHHhhhcCCeEEEeccccccccc------------eeeee------ccCCchhhh
Q psy10669        121 N--ARFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA------------GVKGV------TKTGEKILY  180 (337)
Q Consensus       121 ~--a~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~------------g~~~T------~~~Gg~i~~  180 (337)
                      .  .+|++|+++.+++++..|+++|.++|+++|+++++|++|..|++.            .++++      +++||++++
T Consensus       157 i~~~~~~~v~~~~~~~~~~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~~~dv~~~s~sK~l~G~~gg~i~~  236 (402)
T cd00378         157 ALEFKPKLIVAGASAYPRPIDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLPGADVVTTTTHKTLRGPRGGLILT  236 (402)
T ss_pred             HHhCCCCEEEecCcccCCCcCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCcccCCcEEEeccccCCCCCCceEEEe
Confidence            0  027899988888999999999999999999999999999888753            12222      235777765


Q ss_pred             ---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEe
Q psy10669        181 ---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDL  257 (337)
Q Consensus       181 ---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~  257 (337)
                         ++.+++.....|+..++++++.+++++.++.+.....++++++++.++++++.+.|.+.|+++......+|++++++
T Consensus       237 ~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~v~v~~  316 (402)
T cd00378         237 RKGELAKKINSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKERGFKVVSGGTDNHLVLVDL  316 (402)
T ss_pred             ccHHHHHHHHHHhCccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCCeEeecCCCCeEEEEeC
Confidence               57777777667888889999999999999988765467889999999999999999999999875446799999999


Q ss_pred             cCCCcchHHHHHHHhhcCceeccC------------cccchhhhhHhhhCCCHHHHHH------HHhhCCCcHHHHHHHH
Q psy10669        258 RKNKLTGSKVELVLEEIAIACNKN------------TGISLAAEIQAISGPKLVDFQT------CLHKNEDIVKKVAALK  319 (337)
Q Consensus       258 ~~~~~~~~~~~~~L~~~gI~v~~~------------~girig~~~~t~~G~~~~~~~~------~~~~~~~~~~~~~~lr  319 (337)
                      .+.+.+...+.+.|++.||.+++.            .++|||+...|+.|++.+|+..      .++++.++..+.+.++
T Consensus       317 ~~~~~~~~~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~~~~~~~~~~~~~~  396 (402)
T cd00378         317 RPKGITGKAAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARALKDAEDVAVAEEVR  396 (402)
T ss_pred             CccCCCHHHHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHHhcccchhhHHHHH
Confidence            866667778888899999999731            2799999999999999887654      2334433233568899


Q ss_pred             HHHHHH
Q psy10669        320 KEIEDY  325 (337)
Q Consensus       320 ~~V~~~  325 (337)
                      ++|.+|
T Consensus       397 ~~~~~~  402 (402)
T cd00378         397 KEVAEL  402 (402)
T ss_pred             HHHhcC
Confidence            998764

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.

>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]

Probab=100.00  E-value=2.3e-32  Score=265.50  Aligned_cols=236  Identities=17%  Similarity=0.210  Sum_probs=198.9

Q ss_pred             cceeeeccCCCC----CHHHHHHHhhhhhhccCCCCCCCcCcCccchH-HHHHHHHHHHHHhhcCCCCCCCcceeecCCC
Q psy10669         31 NGIELIASENFT----SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFI-DEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG  105 (337)
Q Consensus        31 ~~i~l~asen~~----~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~-~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg  105 (337)
                      +.+..++||||+    +|.+++++... ..+|+.|.+|+|.+.|+..+ .+||    +++++|||.+.     ++.|+||
T Consensus        39 ~~~~nf~SNdYLGLa~~~~~~~a~~~~-~~~~g~g~~gsR~i~G~~~~h~~LE----~~lA~f~g~e~-----al~f~SG  108 (388)
T COG0156          39 RKVLNFCSNDYLGLASHPELIEAAKAA-IRRYGVGAGGSRLISGTSDLHVELE----EELADFLGAEA-----ALLFSSG  108 (388)
T ss_pred             ceeEeeeccCcccccCCHHHHHHHHHH-HHHhCCCCCCcCcccCCcHHHHHHH----HHHHHHhCCCc-----EEEEccc
Confidence            567899999999    99999999876 66899999999999999776 6899    58899999996     7999999


Q ss_pred             chhHHHHHHhhCCc--------------------------------------cccc----c--cEEEEcCcccccccChH
Q psy10669        106 SPANFAVCEKALPT--------------------------------------NNAR----F--DFLSSGTTCYSRCLDYA  141 (337)
Q Consensus       106 t~AN~~v~~aLl~~--------------------------------------~~a~----p--klII~~~S~~~~~~d~~  141 (337)
                      |.||++++.+|+++                                      .+.+    +  +.+|+++|+|||++|++
T Consensus       109 y~AN~~~i~~l~~~~dli~~D~lnHASiidG~rls~a~~~~f~HnD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiA  188 (388)
T COG0156         109 FVANLGLLSALLKKGDLIFSDELNHASIIDGIRLSRAEVRRFKHNDLDHLEALLEEARENGARRKLIVTEGVFSMDGDIA  188 (388)
T ss_pred             chhHHHHHHHhcCCCcEEEEechhhhhHHHHHHhCCCcEEEecCCCHHHHHHHHHhhhccCCCceEEEEeccccCCCCcC
Confidence            99999999999875                                      1111    1  46666679999999999


Q ss_pred             HHH---HHhhhcCCeEEEeccccccccc----e--------------eeeec-c----CCchhhh--hHHHHHhhccCCC
Q psy10669        142 RFR---QICDETDSIMFADMSHISGLIA----G--------------VKGVT-K----TGEKILY--DYEEKINNAVFPS  193 (337)
Q Consensus       142 ~l~---eia~~~ga~l~vD~AH~~Gli~----g--------------~~~T~-~----~Gg~i~~--~l~~~i~~~~~p~  193 (337)
                      +|+   ++|++||++|+||+||+.|++|    |              +++|. |    .||++++  .+.+.+.....|+
T Consensus       189 pL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~Gg~v~g~~~~~d~L~~~ar~~  268 (388)
T COG0156         189 PLPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSSGGYIAGSAALIDYLRNRARPF  268 (388)
T ss_pred             CHHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcccCceeeCcHHHHHHHHHhCCce
Confidence            877   5678999999999999999999    1              34554 2    4899987  5788777767999


Q ss_pred             CCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhh
Q psy10669        194 LQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEE  273 (337)
Q Consensus       194 ~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~  273 (337)
                      +++|..+|.+++.+.+..+++ .++.+.++++++|++.++..+...|+.+..  +++||++|.+++.. ...+++..|.+
T Consensus       269 ifStalpP~~aaa~~~al~~l-~~~~~~r~~L~~~~~~~~~~~~~~~~~~~~--s~s~I~pv~~gd~~-~a~~~s~~l~~  344 (388)
T COG0156         269 IFSTALPPAVAAAALAALRIL-EEGPERRERLQELAAFFRSLLKALGLVLLP--SESPIIPVILGDEE-RALEASRALLE  344 (388)
T ss_pred             eccCCCCHHHHHHHHHHHHHH-HhCHHHHHHHHHHHHHHHHHHHhcCCccCC--CCCCeeeeEeCCHH-HHHHHHHHHHH
Confidence            999999999998888888876 478999999999999999888888998744  89999999999877 56666777776


Q ss_pred             cCceecc
Q psy10669        274 IAIACNK  280 (337)
Q Consensus       274 ~gI~v~~  280 (337)
                      .||++..
T Consensus       345 ~Gi~v~~  351 (388)
T COG0156         345 EGIYVSA  351 (388)
T ss_pred             CCeeEee
Confidence            6999985

>PLN02955 8-amino-7-oxononanoate synthase

Probab=99.95  E-value=1e-26  Score=230.95  Aligned_cols=233  Identities=13%  Similarity=0.091  Sum_probs=187.0

Q ss_pred             ccceeeeccCCCC----CHHHHHHHhhhhhhccCCCCCCCcCcCccchH-HHHHHHHHHHHHhhcCCCCCCCcceeecCC
Q psy10669         30 INGIELIASENFT----SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFI-DEIEIVAQQRSLKAFNLDPEQWGCNVQPYS  104 (337)
Q Consensus        30 ~~~i~l~asen~~----~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~-~~lE~~~~~~~a~lfg~~~~~~~~~v~~~S  104 (337)
                      .+.+..++||||+    +|.++++.... ..+|+.|..|+|.+.|+... .++|    +++++|||.++     ++.++|
T Consensus       101 ~r~~l~FsSndYLGL~~~p~v~~a~~~a-i~~yG~g~~gSrl~~G~~~~h~~LE----~~LA~f~g~e~-----all~sS  170 (476)
T PLN02955        101 FKKLLLFSGNDYLGLSSHPTISNAAANA-AKEYGMGPKGSALICGYTTYHRLLE----SSLADLKKKED-----CLVCPT  170 (476)
T ss_pred             CceEEEeeccCccCCCCCHHHHHHHHHH-HHHcCCCCCCcCccccChHHHHHHH----HHHHHHHCCCc-----EEEECC
Confidence            4567899999999    99999999865 67999999999999999555 5799    58899999997     799999


Q ss_pred             CchhHHHHHHhhC--------------Cc------------------------------------------ccc--c-cc
Q psy10669        105 GSPANFAVCEKAL--------------PT------------------------------------------NNA--R-FD  125 (337)
Q Consensus       105 gt~AN~~v~~aLl--------------~~------------------------------------------~~a--~-pk  125 (337)
                      ||.||++++.+|+              .+                                          .+.  + .+
T Consensus       171 Gy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~HND~~~Le~~L~~~~~~~  250 (476)
T PLN02955        171 GFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRHCDMYHLNSLLSSCKMKR  250 (476)
T ss_pred             hHHHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCCCCHHHHHHHHHhCCCCc
Confidence            9999999999872              11                                          000  1 13


Q ss_pred             EEEEcCcccccccChHHH---HHHhhhcCCeEEEeccccccccc----e-------------eeeec-c----CCchhhh
Q psy10669        126 FLSSGTTCYSRCLDYARF---RQICDETDSIMFADMSHISGLIA----G-------------VKGVT-K----TGEKILY  180 (337)
Q Consensus       126 lII~~~S~~~~~~d~~~l---~eia~~~ga~l~vD~AH~~Gli~----g-------------~~~T~-~----~Gg~i~~  180 (337)
                      .+|+.+++|+|++|++++   .+||+++|++|+||+||+.|+++    |             +++|. |    .||++++
T Consensus       251 ~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA~G~~GGfi~g  330 (476)
T PLN02955        251 KVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSKAAGCHGGFIAC  330 (476)
T ss_pred             eEEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCccchhccCceeec
Confidence            445557899999998754   57899999999999999999998    1             24554 3    4899987


Q ss_pred             --hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEec
Q psy10669        181 --DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLR  258 (337)
Q Consensus       181 --~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~  258 (337)
                        ++.+.++..-.+.++|++.++.+++.+.+..++.. ..++.++++++|+++|++.   .|+++     .+||++|.++
T Consensus       331 s~~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~-~~~~~r~~L~~n~~~fr~~---~G~~~-----~sPI~pI~ig  401 (476)
T PLN02955        331 SKKWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVAR-KEKWRRKAIWERVKEFKAL---SGVDI-----SSPIISLVVG  401 (476)
T ss_pred             HHHHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHh---cCCCC-----CCCEEEEEeC
Confidence              57788887667888999998888887777666653 3467899999999999984   47754     4899999998


Q ss_pred             CCCcchHHHHHHHhhcCceeccCc
Q psy10669        259 KNKLTGSKVELVLEEIAIACNKNT  282 (337)
Q Consensus       259 ~~~~~~~~~~~~L~~~gI~v~~~~  282 (337)
                      +.. ...++.+.|.+.||+|+...
T Consensus       402 ~~~-~a~~~~~~L~~~Gi~v~~i~  424 (476)
T PLN02955        402 NQE-KALKASRYLLKSGFHVMAIR  424 (476)
T ss_pred             CHH-HHHHHHHHHHHCCCEEEEEC
Confidence            876 67788899999999998544

>KOG1359|consensus

Probab=99.94  E-value=2.6e-26  Score=210.16  Aligned_cols=235  Identities=17%  Similarity=0.187  Sum_probs=193.1

Q ss_pred             cceeeeccCCCC----CHHHHHHHhhhhhhccCCCCCCCcCcCccchHH-HHHHHHHHHHHhhcCCCCCCCcceeecCCC
Q psy10669         31 NGIELIASENFT----SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFID-EIEIVAQQRSLKAFNLDPEQWGCNVQPYSG  105 (337)
Q Consensus        31 ~~i~l~asen~~----~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~-~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg  105 (337)
                      ..|.+++.|||+    +|++.+|-... ...|+.|..+.|+++|++.++ .||    ..+++|.+.|+     ++..+|+
T Consensus        67 k~ilnFcaNnYLGLsshPeii~a~~~a-leeyGaGlssvrfIcGtq~iHk~LE----~kiAqfh~rED-----~ilypsc  136 (417)
T KOG1359|consen   67 KKILNFCANNYLGLSSHPEIINAGQKA-LEEYGAGLSSVRFICGTQDIHKLLE----SKIAQFHGRED-----TILYPSC  136 (417)
T ss_pred             cceeeecccccccccCChHHHHHHHHH-HHHhCCCccceeEEecchHHHHHHH----HHHHHHhCCCc-----eEEeccc
Confidence            467889999999    99999998875 568999999999999999886 677    57899999997     6999999


Q ss_pred             chhHHHHHHhhCCc-------------------------------------cccc--ccEEEEcCcccccccChHHHHHH
Q psy10669        106 SPANFAVCEKALPT-------------------------------------NNAR--FDFLSSGTTCYSRCLDYARFRQI  146 (337)
Q Consensus       106 t~AN~~v~~aLl~~-------------------------------------~~a~--pklII~~~S~~~~~~d~~~l~ei  146 (337)
                      +.||.+++-+++.|                                     +..+  -|+|+ +.++||||+|++++.+|
T Consensus       137 fdANag~feail~pedAvfSDeLNhASIIdGirLckry~h~dv~~l~~~l~~a~k~r~klv~-TDg~FSMDGdiaPl~ei  215 (417)
T KOG1359|consen  137 FDANAGAFEAILTPEDAVFSDELNHASIIDGIRLCKRYRHVDVFDLEHCLISACKMRLKLVV-TDGVFSMDGDIAPLEEI  215 (417)
T ss_pred             cccchHHHHHhcChhhhhhccccccchhhhhhHHHhhhccchhHHHHHHHHHhhhheEEEEE-ecceeccCCCcccHHHH
Confidence            99999999999876                                     0012  35555 56899999999988765


Q ss_pred             ---hhhcCCeEEEeccccccccc----e-------------eeeec------cCCchhhh--hHHHHHhhccCCCCCCCC
Q psy10669        147 ---CDETDSIMFADMSHISGLIA----G-------------VKGVT------KTGEKILY--DYEEKINNAVFPSLQGGP  198 (337)
Q Consensus       147 ---a~~~ga~l~vD~AH~~Gli~----g-------------~~~T~------~~Gg~i~~--~l~~~i~~~~~p~~~g~~  198 (337)
                         +++||++|++|++|..|+.+    |             +.+|.      ..||++.+  .+...+++.-+|+++++.
T Consensus       216 ~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga~GGyttgp~~li~llrqr~RpylFSns  295 (417)
T KOG1359|consen  216 SQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGASGGYTTGPKPLISLLRQRSRPYLFSNS  295 (417)
T ss_pred             HHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcCCCCCCccCChhHHHHHHhcCCceeecCC
Confidence               58999999999999999998    1             13553      25899987  689999988899999999


Q ss_pred             cHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCcee
Q psy10669        199 HNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIAC  278 (337)
Q Consensus       199 ~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v  278 (337)
                      .+|.+.+.+.+...++- .-.+..+.+..|.+.+++.+...||++.+  .+.+|.+|.+++..+. ..+++.|-+.||+|
T Consensus       296 lppavV~~a~ka~dllm-~s~~~i~~~~a~~qrfr~~me~aGftIsg--~~hPI~pv~lGda~lA-~~~ad~lLk~Gi~V  371 (417)
T KOG1359|consen  296 LPPAVVGMAAKAYDLLM-VSSKEIQSRQANTQRFREFMEAAGFTISG--ASHPICPVMLGDARLA-SKMADELLKRGIYV  371 (417)
T ss_pred             CChhhhhhhHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHhcCceecC--CCCCccceecccHHHH-HHHHHHHHhcCceE
Confidence            99999888887777653 33566788889999999999999999976  6677999999987744 45556666669998


Q ss_pred             cc
Q psy10669        279 NK  280 (337)
Q Consensus       279 ~~  280 (337)
                      -.
T Consensus       372 ig  373 (417)
T KOG1359|consen  372 IG  373 (417)
T ss_pred             Ee
Confidence            63

>KOG1360|consensus

Probab=99.94  E-value=5e-26  Score=215.30  Aligned_cols=240  Identities=16%  Similarity=0.161  Sum_probs=194.0

Q ss_pred             cccceeeeccCCCC----CHHHHHHHhhhhhhccCCCCCCCcCcCccchH-HHHHHHHHHHHHhhcCCCCCCCcceeecC
Q psy10669         29 QINGIELIASENFT----SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFI-DEIEIVAQQRSLKAFNLDPEQWGCNVQPY  103 (337)
Q Consensus        29 q~~~i~l~asen~~----~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~-~~lE~~~~~~~a~lfg~~~~~~~~~v~~~  103 (337)
                      -+..+..|+||+|+    +|.|++|+... .++|+.|..|.|.++|+... -+||    ..+++|.+.+.     .+.|+
T Consensus       169 t~k~VtVWCSNDYLgms~Hp~V~~A~~~t-l~~hG~GAGGTRNIsG~s~~hv~LE----~eLA~LHqK~a-----ALlFs  238 (570)
T KOG1360|consen  169 TEKKVTVWCSNDYLGMSRHPEVLDAMHDT-LDRHGAGAGGTRNISGHSKHHVRLE----AELADLHQKEA-----ALLFS  238 (570)
T ss_pred             ccCceEEEecCccccccCChHHHHHHHHH-HHHcCCCcCCccccCCCCchhhhHH----HHHHHHhcCcc-----eeeee
Confidence            34679999999999    99999999876 67999999999999999555 6999    47789999885     79999


Q ss_pred             CCchhHHHHHHhhCCc---------------------------------------c-cc---c--ccEEEEcCccccccc
Q psy10669        104 SGSPANFAVCEKALPT---------------------------------------N-NA---R--FDFLSSGTTCYSRCL  138 (337)
Q Consensus       104 Sgt~AN~~v~~aLl~~---------------------------------------~-~a---~--pklII~~~S~~~~~~  138 (337)
                      |++.||-+++..|.+.                                       + ++   +  ||+|-+ +|+|||++
T Consensus       239 SCfVANDstLftLak~lpgcei~SD~gNHASMI~GIrns~v~K~IFrHND~~hL~~lL~~~~~svPKivAF-EtVhSM~G  317 (570)
T KOG1360|consen  239 SCFVANDSTLFTLAKKLPGCEIFSDEGNHASMIQGIRNSRVPKHIFRHNDLDHLEQLLQSSPKSVPKIVAF-ETVHSMDG  317 (570)
T ss_pred             eeeeccchHHHHHHHHCCCcEEeccccchHHHHHHhhhcCCcceeeccCCHHHHHHHHHhCCCCCCceEEE-eeeeccCC
Confidence            9999999999988432                                       1 11   1  888877 58999999


Q ss_pred             ChHHHHHHh---hhcCCeEEEeccccccccc----e-------------eeeec-c----CCchhhh--hHHHHHhhccC
Q psy10669        139 DYARFRQIC---DETDSIMFADMSHISGLIA----G-------------VKGVT-K----TGEKILY--DYEEKINNAVF  191 (337)
Q Consensus       139 d~~~l~eia---~~~ga~l~vD~AH~~Gli~----g-------------~~~T~-~----~Gg~i~~--~l~~~i~~~~~  191 (337)
                      .+.+|.|||   ++|||+..+|+-|..||.|    |             +++|. |    .||+|..  +|.+.+++..-
T Consensus       318 avcpleelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGcVGGYIAat~~LvDmiRSyAa  397 (570)
T KOG1360|consen  318 AVCPLEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGCVGGYIAATRKLVDMIRSYAA  397 (570)
T ss_pred             CcCCHHHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhcccccceehhhhhHHHHHHHhcC
Confidence            888877665   7899999999999999999    1             24554 2    4899986  79999987655


Q ss_pred             CCCCCCCcHHH-HHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHH
Q psy10669        192 PSLQGGPHNHA-IGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELV  270 (337)
Q Consensus       192 p~~~g~~~~~~-iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~  270 (337)
                      .++++|..||. +++...+...+...++...+++-.+|.+++.+.|.+.|+.|..  ..+||+||.+++..+ ..++++.
T Consensus       398 GFIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~GiPVi~--~pSHIiPv~vgda~l-~~~~sd~  474 (570)
T KOG1360|consen  398 GFIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMELGIPVIP--NPSHIIPVRVGDAAL-AKQASDI  474 (570)
T ss_pred             ceEEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHcCCcccC--CCcceeeeeccCHHH-HHHHHHH
Confidence            55555555554 5555555655556678899999999999999999999999987  899999999998774 4556665


Q ss_pred             Hh-hcCceeccCc
Q psy10669        271 LE-EIAIACNKNT  282 (337)
Q Consensus       271 L~-~~gI~v~~~~  282 (337)
                      |- +.||+|..+.
T Consensus       475 Li~~h~iYvQaIN  487 (570)
T KOG1360|consen  475 LISKHNIYVQAIN  487 (570)
T ss_pred             HHHhcCeEEEecc
Confidence            55 6899998655

>PRK09064 5-aminolevulinate synthase; Validated

Probab=99.87  E-value=2.3e-20  Score=183.75  Aligned_cols=234  Identities=16%  Similarity=0.193  Sum_probs=169.8

Q ss_pred             cceeeeccCCCC----CHHHHHHHhhhhhhccCCCCCCCcCcCcc-chHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC
Q psy10669         31 NGIELIASENFT----SLAVLECLGSCLQNKYSEGLPGKRYYGGN-QFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG  105 (337)
Q Consensus        31 ~~i~l~asen~~----~p~V~~a~~~~l~~~y~~g~~g~r~~~G~-~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg  105 (337)
                      +.+..++|+||+    +|.|.+++... ..+|+.|+.|+|.+.|. ....++|    +++++++|.+.     .+.++||
T Consensus        46 ~~~~~~~s~dylgl~~~p~v~~a~~~~-~~~~~~~~~~s~~~~g~~~~~~~l~----~~la~~~g~~~-----~~~~~sG  115 (407)
T PRK09064         46 REVTVWCSNDYLGMGQHPKVIEAMIEA-LDRCGAGAGGTRNISGTNHYHVELE----RELADLHGKEA-----ALVFTSG  115 (407)
T ss_pred             ceEEEEECCCCcCCCCCHHHHHHHHHH-HHHcCCCCCCcCcCccCHHHHHHHH----HHHHHHhCCCc-----EEEECcH
Confidence            457789999999    99999999865 45788888888888775 4456777    57789999754     6889999


Q ss_pred             chhHHHHHHhhCC--c-------------------------------------c-cc-----cccEEEEcCccccccc--
Q psy10669        106 SPANFAVCEKALP--T-------------------------------------N-NA-----RFDFLSSGTTCYSRCL--  138 (337)
Q Consensus       106 t~AN~~v~~aLl~--~-------------------------------------~-~a-----~pklII~~~S~~~~~~--  138 (337)
                      +.||.+++..+..  +                                     + +.     ++++|++. +.+++.+  
T Consensus       116 ~~an~~ai~~l~~~~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~~v~~~-~v~s~~G~~  194 (407)
T PRK09064        116 YVSNDATLSTLAKLIPDCVIFSDELNHASMIEGIRRSRCEKHIFRHNDVAHLEELLAAADPDRPKLIAFE-SVYSMDGDI  194 (407)
T ss_pred             HHHHHHHHHHHhCCCCCCEEEEeCcchHHHHHHHHHcCCcEEEECCCCHHHHHHHHHhccCCCCeEEEEe-CCCCCCccc
Confidence            9999998888753  2                                     0 11     24677775 5777665  


Q ss_pred             -ChHHHHHHhhhcCCeEEEeccccccccc----e-------------eeeec-c----CCchhhh--hHHHHHhhccCCC
Q psy10669        139 -DYARFRQICDETDSIMFADMSHISGLIA----G-------------VKGVT-K----TGEKILY--DYEEKINNAVFPS  193 (337)
Q Consensus       139 -d~~~l~eia~~~ga~l~vD~AH~~Gli~----g-------------~~~T~-~----~Gg~i~~--~l~~~i~~~~~p~  193 (337)
                       |+++|.++|+++|++|+||+||+.|+++    +             +++|. |    .||++++  ++.+.+.....|.
T Consensus       195 ~~l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~GG~~~~~~~~~~~l~~~~~~~  274 (407)
T PRK09064        195 APIAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFGVMGGYIAGSAALVDAVRSYAPGF  274 (407)
T ss_pred             cCHHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhhhccCceEecCHHHHHHHHHhCccc
Confidence             6778889999999999999999988765    1             22343 2    3788776  5666665443444


Q ss_pred             CCC-CCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHh
Q psy10669        194 LQG-GPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLE  272 (337)
Q Consensus       194 ~~g-~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~  272 (337)
                      .++ +.++...++...++..+.  +.+..++++.++.++|.+.|.+.|++++.  +.++++++.++.. ..+.++.+.|.
T Consensus       275 ~~t~~~~~~~~~aa~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~g~~~~~--~~~~iv~i~~~~~-~~~~~l~~~L~  349 (407)
T PRK09064        275 IFTTSLPPAIAAAALASIRHLK--ESNEERERHQERAAKLKAALDAAGIPVMP--NESHIVPVMVGDP-EKCKKASDMLL  349 (407)
T ss_pred             cccCcCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHcCCCCCC--CCCCEEEEEeCCH-HHHHHHHHHHH
Confidence            433 344455556556665553  23556789999999999999999998875  5678888877542 24566777764


Q ss_pred             -hcCceecc
Q psy10669        273 -EIAIACNK  280 (337)
Q Consensus       273 -~~gI~v~~  280 (337)
                       +.||.+..
T Consensus       350 ~~~gi~v~~  358 (407)
T PRK09064        350 EEHGIYVQP  358 (407)
T ss_pred             HhCCEEEee
Confidence             57999975

>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase

Probab=99.86  E-value=5.8e-20  Score=180.67  Aligned_cols=234  Identities=17%  Similarity=0.201  Sum_probs=169.3

Q ss_pred             cceeeeccCCCC----CHHHHHHHhhhhhhccCCCCCCCcCcCccc-hHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC
Q psy10669         31 NGIELIASENFT----SLAVLECLGSCLQNKYSEGLPGKRYYGGNQ-FIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG  105 (337)
Q Consensus        31 ~~i~l~asen~~----~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~-~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg  105 (337)
                      +.+..++||||+    +|.|++++... ..+|+.|+.|+|.+.|+. ...++|    +++++++|.+.     .+.++||
T Consensus        45 ~~~~~~~sn~ylgl~~~p~v~~a~~~~-~~~~~~~~~~s~~~~g~~~~~~~Le----~~la~~~g~~~-----~l~~~sG  114 (402)
T TIGR01821        45 KDVTVWCSNDYLGMGQHPEVLQAMHET-LDKYGAGAGGTRNISGTNIPHVELE----AELADLHGKES-----ALVFTSG  114 (402)
T ss_pred             eeEEEeEccCcCCCCCCHHHHHHHHHH-HHHcCCCCcchhhhhCCcHHHHHHH----HHHHHHhCCCe-----EEEECch
Confidence            457789999999    99999999876 568888989999888875 446777    57889999764     6999999


Q ss_pred             chhHHHHHHhhCC--c-------------------------------------c-cc-----cccEEEEcCcccc---cc
Q psy10669        106 SPANFAVCEKALP--T-------------------------------------N-NA-----RFDFLSSGTTCYS---RC  137 (337)
Q Consensus       106 t~AN~~v~~aLl~--~-------------------------------------~-~a-----~pklII~~~S~~~---~~  137 (337)
                      +.||.+++..+..  +                                     + +.     ++++|++. +.++   ..
T Consensus       115 ~~an~~ai~~l~~~~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~v~~e-~~~~~~G~~  193 (402)
T TIGR01821       115 YVANDATLATLAKIIPGCVIFSDELNHASMIEGIRHSGAEKFIFRHNDVAHLEKLLQSVDPNRPKIIAFE-SVYSMDGDI  193 (402)
T ss_pred             HHHHHHHHHHhhCCCCCCEEEEcchHhHHHHHHHHHcCCeEEEECCCCHHHHHHHHHhccCCCCeEEEEc-CCCCCCCCc
Confidence            9999999888753  2                                     0 00     14677765 4554   55


Q ss_pred             cChHHHHHHhhhcCCeEEEeccccccccc----e-------------eeeec-c----CCchhhh--hHHHHHhhccCCC
Q psy10669        138 LDYARFRQICDETDSIMFADMSHISGLIA----G-------------VKGVT-K----TGEKILY--DYEEKINNAVFPS  193 (337)
Q Consensus       138 ~d~~~l~eia~~~ga~l~vD~AH~~Gli~----g-------------~~~T~-~----~Gg~i~~--~l~~~i~~~~~p~  193 (337)
                      .|+++|.++|+++|++|++|++|+.|+++    |             +++|. |    .||++++  ++.+.+.....+.
T Consensus       194 ~~l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~GG~i~~~~~~~~~l~~~~~~~  273 (402)
T TIGR01821       194 APIEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGVVGGYIAASRKLIDAIRSYAPGF  273 (402)
T ss_pred             cCHHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhccCCceeecCHHHHHHHHHhCcCc
Confidence            57778889999999999999999988865    1             12233 2    3787765  5666665433343


Q ss_pred             C-CCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHh
Q psy10669        194 L-QGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLE  272 (337)
Q Consensus       194 ~-~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~  272 (337)
                      . .++.++..+++...++..+.+  .++.+++..++.++|++.|++.|+++..  +.++++++.++... ...++.+.|.
T Consensus       274 ~~t~~~~~~~~aaa~aaL~~~~~--~~~~~~~~~~~~~~l~~~L~~~g~~~~~--~~~~i~~i~~~~~~-~a~~~~~~L~  348 (402)
T TIGR01821       274 IFTTSLPPAIAAGATASIRHLKE--SQDLRRAHQENVKRLKNLLEALGIPVIP--NPSHIVPVIIGDAA-LCKKVSDLLL  348 (402)
T ss_pred             eecCcCCHHHHHHHHHHHHHhhc--CHHHHHHHHHHHHHHHHHHHHcCCCcCC--CCCCEEEEEeCCHH-HHHHHHHHHH
Confidence            3 334555566666666666542  3566777889999999999999998765  57888888765322 3456777764


Q ss_pred             -hcCceecc
Q psy10669        273 -EIAIACNK  280 (337)
Q Consensus       273 -~~gI~v~~  280 (337)
                       +.||.+..
T Consensus       349 ~~~Gi~v~~  357 (402)
T TIGR01821       349 NKHGIYVQP  357 (402)
T ss_pred             hcCCEEEEe
Confidence             57999875

This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.

>PRK13393 5-aminolevulinate synthase; Provisional

Probab=99.85  E-value=2.9e-19  Score=176.09  Aligned_cols=234  Identities=14%  Similarity=0.181  Sum_probs=169.8

Q ss_pred             cceeeeccCCCC----CHHHHHHHhhhhhhccCCCCCCCcCcCccc-hHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC
Q psy10669         31 NGIELIASENFT----SLAVLECLGSCLQNKYSEGLPGKRYYGGNQ-FIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG  105 (337)
Q Consensus        31 ~~i~l~asen~~----~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~-~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg  105 (337)
                      +.+.+++||||+    +|+|++++... ..+|+.|+.++|...|+. ...++|    +++++++|.+.     .+.++||
T Consensus        45 ~~~~~~~sn~ylgl~~~p~v~~a~~~~-~~~~~~~~~~s~~~~~~~~~~~~le----~~la~~~g~~~-----~~~~~SG  114 (406)
T PRK13393         45 REVTVWCSNDYLGMGQHPAVLAAMHEA-LDTCGAGAGGTRNISGTNHYHVLLE----AELADLHGKEA-----ALLFTSG  114 (406)
T ss_pred             ccEEEeecccccCCCCCHHHHHHHHHH-HHHcCCCCcccccccCChHHHHHHH----HHHHHHhCCCc-----EEEeCCc
Confidence            457789999999    99999999876 457888888899888764 446777    58899999864     7999999


Q ss_pred             chhHHHHHHhhCC--c----------------------------------------ccc---cccEEEEcCcccc---cc
Q psy10669        106 SPANFAVCEKALP--T----------------------------------------NNA---RFDFLSSGTTCYS---RC  137 (337)
Q Consensus       106 t~AN~~v~~aLl~--~----------------------------------------~~a---~pklII~~~S~~~---~~  137 (337)
                      +.||.+++.++..  +                                        +..   ++++|++. +.++   ..
T Consensus       115 ~~An~~ai~~l~~~~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~v~~~-~v~~~~G~~  193 (406)
T PRK13393        115 YVSNWAALSTLGSRLPGCVILSDELNHASMIEGIRHSRAEKRIFRHNDPADLERKLSDLDPHRPKLVAFE-SVYSMDGDI  193 (406)
T ss_pred             HHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHcCCeEEEeCCCCHHHHHHHHHhccCCCCEEEEEc-CCCCCCCch
Confidence            9999999987753  1                                        000   14567665 4554   55


Q ss_pred             cChHHHHHHhhhcCCeEEEeccccccccc----e-------------eeeec-c----CCchhhh--hHHHHHhhccCCC
Q psy10669        138 LDYARFRQICDETDSIMFADMSHISGLIA----G-------------VKGVT-K----TGEKILY--DYEEKINNAVFPS  193 (337)
Q Consensus       138 ~d~~~l~eia~~~ga~l~vD~AH~~Gli~----g-------------~~~T~-~----~Gg~i~~--~l~~~i~~~~~p~  193 (337)
                      .|+++|.++|+++|+++++|++|+.|+++    |             +.+|. |    .||++++  ++.+.+.....++
T Consensus       194 ~~l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~GG~~~~~~~~~~~l~~~~~~~  273 (406)
T PRK13393        194 APIAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGVMGGYITGSAALCDFIRSFASGF  273 (406)
T ss_pred             hCHHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhcccCceeeCCHHHHHHHHHhCcCc
Confidence            57778889999999999999999999876    1             11233 2    3788775  5666666544454


Q ss_pred             CC-CCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHh
Q psy10669        194 LQ-GGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLE  272 (337)
Q Consensus       194 ~~-g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~  272 (337)
                      .+ ++.+++..++...++..+.+  ....++++.++.++|.+.|.+.|++++.  +++++++|.+++. .+..++.+.|.
T Consensus       274 ~~t~~~~p~~~aa~~aaL~~~~~--~~~~~~~~~~~~~~l~~~L~~~g~~~~~--~~~~i~~v~~~~~-~~~~~l~~~L~  348 (406)
T PRK13393        274 IFTTSLPPAVAAGALASVRHLKA--SSAERERHQDRVARLRARLDKAGIPHLP--NPSHIVPVMVGDP-VLCKQISDELL  348 (406)
T ss_pred             eecCccCHHHHHHHHHHHHHHhh--CHHHHHHHHHHHHHHHHHHHHcCCCcCC--CCCCeEEEEeCCH-HHHHHHHHHHH
Confidence            43 45566667777777766532  2344677889999999999999988764  5777888876432 24566777776


Q ss_pred             h-cCceecc
Q psy10669        273 E-IAIACNK  280 (337)
Q Consensus       273 ~-~gI~v~~  280 (337)
                      + .||.+..
T Consensus       349 ~~~Gi~v~~  357 (406)
T PRK13393        349 DRYGIYVQP  357 (406)
T ss_pred             HhCCEEEEe
Confidence            5 6999875

>PRK13392 5-aminolevulinate synthase; Provisional

Probab=99.84  E-value=5.7e-19  Score=174.16  Aligned_cols=233  Identities=15%  Similarity=0.170  Sum_probs=169.7

Q ss_pred             ceeeeccCCCC----CHHHHHHHhhhhhhccCCCCCCCcCcCccc-hHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCc
Q psy10669         32 GIELIASENFT----SLAVLECLGSCLQNKYSEGLPGKRYYGGNQ-FIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGS  106 (337)
Q Consensus        32 ~i~l~asen~~----~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~-~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt  106 (337)
                      ....++|+||+    +|.|++++... ..+|+.|..++|.+.|.. ...++|    +++++++|.++     .+.++||+
T Consensus        47 ~~~~~~sn~yl~l~~~p~v~~a~~~~-~~~~~~~~~~s~~~~~~~~~~~~Le----~~la~~~g~~~-----~i~~~sG~  116 (410)
T PRK13392         47 RVTIWCSNDYLGMGQHPDVIGAMVDA-LDRYGAGAGGTRNISGTSHPHVLLE----RELADLHGKES-----ALLFTSGY  116 (410)
T ss_pred             eEEEEECCCccCCCCCHHHHHHHHHH-HHHcCCCCchhhhcccChHHHHHHH----HHHHHHhCCCC-----EEEECcHH
Confidence            46689999999    99999999865 467888888888888874 456777    58899999764     69999999


Q ss_pred             hhHHHHHHhhCC--c--------------------------------------ccc-----cccEEEEcCccc---cccc
Q psy10669        107 PANFAVCEKALP--T--------------------------------------NNA-----RFDFLSSGTTCY---SRCL  138 (337)
Q Consensus       107 ~AN~~v~~aLl~--~--------------------------------------~~a-----~pklII~~~S~~---~~~~  138 (337)
                      .||..++.++..  +                                      .+.     ++++|++. +.+   +...
T Consensus       117 ~a~~~~i~~l~~~~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~t~~v~i~-~~~n~tG~~~  195 (410)
T PRK13392        117 VSNDAALSTLGKLLPGCVILSDALNHASMIEGIRRSGAEKQVFRHNDLADLEEQLASVDPDRPKLIAFE-SVYSMDGDIA  195 (410)
T ss_pred             HHHHHHHHHHhcCCCCCEEEEehhhhHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhccCCCCEEEEEe-CCCCCCcccc
Confidence            999998887742  2                                      000     25677775 333   4566


Q ss_pred             ChHHHHHHhhhcCCeEEEeccccccccc----e-------------eeeec-c----CCchhhh--hHHHHHhhccCCCC
Q psy10669        139 DYARFRQICDETDSIMFADMSHISGLIA----G-------------VKGVT-K----TGEKILY--DYEEKINNAVFPSL  194 (337)
Q Consensus       139 d~~~l~eia~~~ga~l~vD~AH~~Gli~----g-------------~~~T~-~----~Gg~i~~--~l~~~i~~~~~p~~  194 (337)
                      |+++|.++|+++|+++++|++|..|+++    |             +++|. |    .||++++  ++.+.+.....|..
T Consensus       196 ~l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~GG~~~~~~~~~~~l~~~~~~~~  275 (410)
T PRK13392        196 PIEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCLGGYIAASADLIDFVRSFAPGFI  275 (410)
T ss_pred             cHHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhcccchhhcCHHHHHHHHHhCcchh
Confidence            7888999999999999999999988864    1             12343 2    3788875  56665554433433


Q ss_pred             CCC-CcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHH-h
Q psy10669        195 QGG-PHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVL-E  272 (337)
Q Consensus       195 ~g~-~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L-~  272 (337)
                      .++ .+++..+++..++..+.  ...+.++++.++.++|.+.|.+.|+++..  ++++++++.++.. .+..++.+.| +
T Consensus       276 ~s~~~~~~~~~a~~aaL~~~~--~~~~~~~~~~~~~~~l~~~L~~~g~~~~~--~~~~~~~i~~~~~-~~~~~~~~~L~~  350 (410)
T PRK13392        276 FTTALPPAVAAGATAAIRHLK--TSQTERDAHQDRVAALKAKLNANGIPVMP--SPSHIVPVMVGDP-TLCKAISDRLMS  350 (410)
T ss_pred             ccCcCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHcCCCCCC--CCCCEEEEEeCCH-HHHHHHHHHHHH
Confidence            333 44455666666776553  34567788999999999999999998864  6788887877532 2456677776 5


Q ss_pred             hcCceecc
Q psy10669        273 EIAIACNK  280 (337)
Q Consensus       273 ~~gI~v~~  280 (337)
                      +.||.+..
T Consensus       351 ~~GI~v~~  358 (410)
T PRK13392        351 EHGIYIQP  358 (410)
T ss_pred             hCCEEEee
Confidence            68999985

>PLN02483 serine palmitoyltransferase

Probab=99.81  E-value=4.9e-18  Score=171.45  Aligned_cols=238  Identities=15%  Similarity=0.131  Sum_probs=170.1

Q ss_pred             cceeeeccCCCC-----CHHHHHHHhhhhhhccCCCCCCCcCcCcc-chHHHHHHHHHHHHHhhcCCCCCCCcceeecCC
Q psy10669         31 NGIELIASENFT-----SLAVLECLGSCLQNKYSEGLPGKRYYGGN-QFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYS  104 (337)
Q Consensus        31 ~~i~l~asen~~-----~p~V~~a~~~~l~~~y~~g~~g~r~~~G~-~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~S  104 (337)
                      +....++|+||+     ++.+.++.... ..+|+.|+.++|...|+ ..+.++|    +++++++|.++     ++.+++
T Consensus       100 ~~~~n~~s~~YLgl~~~~~~~~~~~~~a-i~~~g~~~~~sr~~~g~~~~~~ele----~~lA~~~g~~~-----ai~~~~  169 (489)
T PLN02483        100 RRCLNLGSYNYLGFAAADEYCTPRVIES-LKKYSASTCSSRVDGGTTKLHRELE----ELVARFVGKPA-----AIVFGM  169 (489)
T ss_pred             ceEEEeecCCccCcCCCCHHHHHHHHHH-HHHhCCCCCccccccCCcHHHHHHH----HHHHHHhCCCc-----EEEECC
Confidence            345688999999     35555555544 45788888899987775 5557888    58899999875     799999


Q ss_pred             CchhHHHHHHhhCCc-------------------------------------c-c--c------c---c--cEEEEcCcc
Q psy10669        105 GSPANFAVCEKALPT-------------------------------------N-N--A------R---F--DFLSSGTTC  133 (337)
Q Consensus       105 gt~AN~~v~~aLl~~-------------------------------------~-~--a------~---p--klII~~~S~  133 (337)
                      |+.+|++++.+|+++                                     + +  +      +   |  +++|+.+++
T Consensus       170 G~~an~~~i~al~~~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~~d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v  249 (489)
T PLN02483        170 GYATNSTIIPALIGKGGLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGI  249 (489)
T ss_pred             HHHHHHHHHHHhCCCCCEEEEcchhhHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhhhhccccccccCCceEEEEECCC
Confidence            999999999999765                                     0 0  0      1   1  556666788


Q ss_pred             ccccc---ChHHHHHHhhhcCCeEEEeccccccccc------------------eeeeecc-----CCchhhh--hHHHH
Q psy10669        134 YSRCL---DYARFRQICDETDSIMFADMSHISGLIA------------------GVKGVTK-----TGEKILY--DYEEK  185 (337)
Q Consensus       134 ~~~~~---d~~~l~eia~~~ga~l~vD~AH~~Gli~------------------g~~~T~~-----~Gg~i~~--~l~~~  185 (337)
                      |++.+   |+++|.++|+++|++|++|++|+.|.++                  .+++|+.     .||++++  ++.+.
T Consensus       250 ~s~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~~GG~i~~~~~li~~  329 (489)
T PLN02483        250 YSMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSCGGYIAGSKELIQY  329 (489)
T ss_pred             CCCCCcccCHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhcccCceEEEcCHHHHHH
Confidence            98886   6667888999999999999999977653                  1244543     4898876  67777


Q ss_pred             HhhccCCCCC-CCCcHHHHHHHHHHHHHHhch----hhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCC
Q psy10669        186 INNAVFPSLQ-GGPHNHAIGAIATAMLQAQSD----EFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKN  260 (337)
Q Consensus       186 i~~~~~p~~~-g~~~~~~iaala~a~~e~~~~----~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~  260 (337)
                      +.....+..+ ++.+++.+++...++..+...    ...+.++++.+|.++|.+.|.+.|+.+.+ ..+++++++-+...
T Consensus       330 l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~G~~v~~-~~~sp~~~l~l~~~  408 (489)
T PLN02483        330 LKRTCPAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKMGFEVLG-DNDSPVMPIMLYNP  408 (489)
T ss_pred             HHHhCccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHCCCcccC-CCCCCEEEEEECCH
Confidence            7765443333 345666666666666655422    23567889999999999999999998764 34567777765433


Q ss_pred             CcchHHHHHHHhhcCceecc
Q psy10669        261 KLTGSKVELVLEEIAIACNK  280 (337)
Q Consensus       261 ~~~~~~~~~~L~~~gI~v~~  280 (337)
                      . ...++.+.|.+.||.+.+
T Consensus       409 ~-~~~~~~~~Ll~~GI~v~~  427 (489)
T PLN02483        409 A-KIPAFSRECLKQNVAVVV  427 (489)
T ss_pred             H-HHHHHHHHHHHCCcEEee
Confidence            2 445666777777999874

>PRK07179 hypothetical protein; Provisional

Probab=99.81  E-value=7.8e-18  Score=165.93  Aligned_cols=233  Identities=15%  Similarity=0.210  Sum_probs=167.8

Q ss_pred             cccceeeeccCCCC----CHHHHHHHhhhhhhccCCCCCCC-cCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecC
Q psy10669         29 QINGIELIASENFT----SLAVLECLGSCLQNKYSEGLPGK-RYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPY  103 (337)
Q Consensus        29 q~~~i~l~asen~~----~p~V~~a~~~~l~~~y~~g~~g~-r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~  103 (337)
                      ....+..++|++|+    +|.|++++...+ .+|+.+..++ .+..|.....++|    +++++++|.++     .+.++
T Consensus        52 ~g~~~~~~~~~~YL~l~~~p~v~~a~~~~~-~~~~~~~~~s~~~~~~~~~~~~le----~~la~~~g~~~-----~~~~~  121 (407)
T PRK07179         52 PGPDAIILQSNDYLNLSGHPDIIKAQIAAL-QEEGDSLVMSAVFLHDDSPKPQFE----KKLAAFTGFES-----CLLCQ  121 (407)
T ss_pred             CCCcEEEeecCCccCCCCCHHHHHHHHHHH-HHhCCCCCccccccCCchHHHHHH----HHHHHHhCCCc-----EEEEC
Confidence            44467789999999    899999998764 4665444434 4444445557888    58899999976     57788


Q ss_pred             CCchhHHHHHHhhCCc-------------------------------------c-cc--cccEEEEcCccc---ccccCh
Q psy10669        104 SGSPANFAVCEKALPT-------------------------------------N-NA--RFDFLSSGTTCY---SRCLDY  140 (337)
Q Consensus       104 Sgt~AN~~v~~aLl~~-------------------------------------~-~a--~pklII~~~S~~---~~~~d~  140 (337)
                      ||+.||.+++.+++.+                                     + +.  +|++|++. +.+   +...|+
T Consensus       122 sG~~An~~~l~~l~~~g~~v~~~~~~h~s~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~lV~v~-~v~n~tG~i~pl  200 (407)
T PRK07179        122 SGWAANVGLLQTIADPNTPVYIDFFAHMSLWEGVRAAGAQAHPFRHNDVDHLRRQIERHGPGIIVVD-SVYSTTGTIAPL  200 (407)
T ss_pred             CHHHHHHHHHHHhCCCCCEEEEECCcCHHHHHHHHHCCCeEEEecCCCHHHHHHHHHhcCCeEEEEC-CCCCCCCccccH
Confidence            9999999999998754                                     1 01  15677775 454   567778


Q ss_pred             HHHHHHhhhcCCeEEEeccccccccc----------e-------eeeec-c----CCchhhh--hHHHHHhhccCCCC-C
Q psy10669        141 ARFRQICDETDSIMFADMSHISGLIA----------G-------VKGVT-K----TGEKILY--DYEEKINNAVFPSL-Q  195 (337)
Q Consensus       141 ~~l~eia~~~ga~l~vD~AH~~Gli~----------g-------~~~T~-~----~Gg~i~~--~l~~~i~~~~~p~~-~  195 (337)
                      ++|.++|+++|++|++|++|+.|..+          +       +++|. |    ++|++++  ++.+.+.....|.. .
T Consensus       201 ~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g~~~G~l~~~~~~~~~~~~~~~~~~~~  280 (407)
T PRK07179        201 ADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFAGRAGIITCPRELAEYVPFVSYPAIFS  280 (407)
T ss_pred             HHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhhccCeEEEeCHHHHHHHHHhCcCeeeC
Confidence            88899999999999999999987643          1       12333 2    4677765  56566654445555 3


Q ss_pred             CCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcC
Q psy10669        196 GGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIA  275 (337)
Q Consensus       196 g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~g  275 (337)
                      +++.++.++++..++..+.  ..++.++++.++.++|.+.|.+.|+++.+   .++++++.+.... ++..+.+.|.+.|
T Consensus       281 ~t~~~~~~aa~~aal~~~~--~~~~~~~~l~~~~~~l~~~L~~~g~~v~~---~~~i~~l~~~~~~-~~~~~~~~L~~~G  354 (407)
T PRK07179        281 STLLPHEIAGLEATLEVIE--SADDRRARLHANARFLREGLSELGYNIRS---ESQIIALETGSER-NTEVLRDALEERN  354 (407)
T ss_pred             CCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHcCCCCCC---CCCEEEEEeCCHH-HHHHHHHHHHHCC
Confidence            5667777887777776653  34678899999999999999999998763   4678877765422 4567778888889


Q ss_pred             cee
Q psy10669        276 IAC  278 (337)
Q Consensus       276 I~v  278 (337)
                      |.+
T Consensus       355 I~~  357 (407)
T PRK07179        355 VFG  357 (407)
T ss_pred             ceE
Confidence            974

>PLN03227 serine palmitoyltransferase-like protein; Provisional

Probab=99.80  E-value=7e-18  Score=165.92  Aligned_cols=233  Identities=13%  Similarity=0.053  Sum_probs=166.9

Q ss_pred             eeccCCCC----CHHHHHHHhhhhhhccCCCCCCCcCcCccch-HHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhH
Q psy10669         35 LIASENFT----SLAVLECLGSCLQNKYSEGLPGKRYYGGNQF-IDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPAN  109 (337)
Q Consensus        35 l~asen~~----~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~-~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN  109 (337)
                      .++|+||+    +|+++++.... ..+|+.|+.|+|.+.|+.. +.++|    +++++++|.++     ++.++||+.||
T Consensus         2 ~f~s~dyLgl~~~~~~~~~~~~a-~~~~g~~~~~sr~~yg~~~~~~~LE----~~lA~~~g~e~-----al~~~sG~~a~   71 (392)
T PLN03227          2 NFATHDFLSTSSSPTLRQTALES-LSHYGCGSCGPRGFYGTIDAHLELE----QCMAEFLGTES-----AILYSDGASTT   71 (392)
T ss_pred             CCcCcCccCCCCCHHHHHHHHHH-HHHhCCCCcccccccCChHHHHHHH----HHHHHHhCCCc-----EEEecCcHHHH
Confidence            47899999    99999999876 5689999999999877644 46888    58899999986     79999999999


Q ss_pred             HHHHHhhCCc-----------------------------------------cc----------c--cccEEEEcCcccc-
Q psy10669        110 FAVCEKALPT-----------------------------------------NN----------A--RFDFLSSGTTCYS-  135 (337)
Q Consensus       110 ~~v~~aLl~~-----------------------------------------~~----------a--~pklII~~~S~~~-  135 (337)
                      ++++.+++++                                         ..          .  ++++|++. +.++ 
T Consensus        72 ~~~i~~l~~~GD~Vl~~~~~h~s~~~~~~l~~~~~~~~~~~d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E-~v~~~  150 (392)
T PLN03227         72 SSTVAAFAKRGDLLVVDRGVNEALLVGVSLSRANVRWFRHNDMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVE-GLYKN  150 (392)
T ss_pred             HHHHHHhCCCCCEEEEeccccHHHHHHHHHcCCeEEEeCCCCHHHHHHHHHHhhhhccccccccCCCcEEEEEc-CCcCC
Confidence            9999999765                                         00          0  14566664 5654 


Q ss_pred             --cccChHHHHHHhhhcCCeEEEeccccccccc----------e---------eeeec-----cCCchhhh--hHHHHHh
Q psy10669        136 --RCLDYARFRQICDETDSIMFADMSHISGLIA----------G---------VKGVT-----KTGEKILY--DYEEKIN  187 (337)
Q Consensus       136 --~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~----------g---------~~~T~-----~~Gg~i~~--~l~~~i~  187 (337)
                        ...|++++.++|+++|++|++|++|+.|.++          |         ++++.     +.||++++  ++.+.+.
T Consensus       151 ~G~i~~l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g~~gg~v~~~~~~~~~~~  230 (392)
T PLN03227        151 TGTLAPLKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFGSVGGMTVGSEEVVDHQR  230 (392)
T ss_pred             CCcccCHHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhhhccCcEEecCHHHHHHHH
Confidence              5556677889999999999999999988764          0         12221     34676655  5555554


Q ss_pred             hccCCCCCCCCcHH-HHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEec---------CCCCCeEEEEEe
Q psy10669        188 NAVFPSLQGGPHNH-AIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVT---------GGTDVHLILIDL  257 (337)
Q Consensus       188 ~~~~p~~~g~~~~~-~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~---------~~t~~h~v~V~~  257 (337)
                      ......++|++.+| ..++...++..+.+  .++..+++.++.++|++.|.+.++..+.         +.++++++.|.+
T Consensus       231 ~~~~~~~~~~~~~p~~~~aa~~al~~~~~--~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~rg~~~~~~~~~~~i~~i~~  308 (392)
T PLN03227        231 LSGSGYCFSASAPPFLAKADATATAGELA--GPQLLNRLHDSIANLYSTLTNSSHPYALKLRNRLVITSDPISPIIYLRL  308 (392)
T ss_pred             HhCcCccccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhcCCccccccccccccCCCCCCCEEEEEe
Confidence            33334456665444 34444445656543  4678999999999999999987665321         235789999998


Q ss_pred             cCCCcc--------hHHHHHHHhhcCceecc
Q psy10669        258 RKNKLT--------GSKVELVLEEIAIACNK  280 (337)
Q Consensus       258 ~~~~~~--------~~~~~~~L~~~gI~v~~  280 (337)
                      ++...+        ..++.+.|.+.||.+++
T Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~  339 (392)
T PLN03227        309 SDQEATRRTDETLILDQIAHHSLSEGVAVVS  339 (392)
T ss_pred             CCHHHhhhhhhhhHHHHHHHHHHHCCCEEEe
Confidence            653211        24677778888999864

>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase

Probab=99.79  E-value=2.6e-17  Score=160.86  Aligned_cols=234  Identities=16%  Similarity=0.213  Sum_probs=167.4

Q ss_pred             ccceeeeccCCCC----CHHHHHHHhhhhhhccCCCCCCCcCcCccc-hHHHHHHHHHHHHHhhcCCCCCCCcceeecCC
Q psy10669         30 INGIELIASENFT----SLAVLECLGSCLQNKYSEGLPGKRYYGGNQ-FIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYS  104 (337)
Q Consensus        30 ~~~i~l~asen~~----~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~-~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~S  104 (337)
                      .+.+..++|+||+    +|+|++++...+ .+|+.|++++|++.|.. ...++|    +.+++++|.++     .+.++|
T Consensus        37 g~~~i~~~~~~~lg~~~~~~v~~~~~~~~-~~~~~~~~~s~~~~G~~~~~~~le----~~ia~~~g~~~-----~ii~~~  106 (393)
T TIGR01822        37 GREVLNFCANNYLGLSSHPDLIQAAKDAL-DEHGFGMSSVRFICGTQDIHKELE----AKIAAFLGTED-----TILYAS  106 (393)
T ss_pred             CceEEEeeCCCccccCCCHHHHHHHHHHH-HHhCCCCCCcCcccCChHHHHHHH----HHHHHHhCCCc-----EEEECc
Confidence            3456778899996    899999998764 46777999999999973 336777    58899999875     688889


Q ss_pred             CchhHHHHHHhhCCc------------------------------------c--c-----c--cccEEEEcCccc---cc
Q psy10669        105 GSPANFAVCEKALPT------------------------------------N--N-----A--RFDFLSSGTTCY---SR  136 (337)
Q Consensus       105 gt~AN~~v~~aLl~~------------------------------------~--~-----a--~pklII~~~S~~---~~  136 (337)
                      |+.||.+++.+++++                                    +  +     .  ++++|+++ +.+   +.
T Consensus       107 ~~~a~~~~~~~l~~~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~-~v~~~tG~  185 (393)
T TIGR01822       107 CFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYANNDMADLEAQLKEARAAGARHRLIATD-GVFSMDGV  185 (393)
T ss_pred             hHHHHHHHHHHhCCCCCEEEEeccccHHHHHHHHhcCCceEEeCCCCHHHHHHHHHhhhhcCCCceEEEEe-CCccCCCC
Confidence            999999999999765                                    0  0     1  24566665 344   44


Q ss_pred             ccChHHHHHHhhhcCCeEEEeccccccccc-----------------eeeeecc------CCchhhh--hHHHHHhhccC
Q psy10669        137 CLDYARFRQICDETDSIMFADMSHISGLIA-----------------GVKGVTK------TGEKILY--DYEEKINNAVF  191 (337)
Q Consensus       137 ~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----------------g~~~T~~------~Gg~i~~--~l~~~i~~~~~  191 (337)
                      ..|+++|.++|+++|++|++|++|..|.++                 .+++|.+      .||++.+  ++.+.+.+...
T Consensus       186 ~~~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l~g~r~G~~~~~~~~~~~l~~~~~  265 (393)
T TIGR01822       186 IAPLDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGTLGKALGGASGGFTTARKEVVELLRQRSR  265 (393)
T ss_pred             cCCHHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEEChHHhhCCCcEEEEeCHHHHHHHHHhCc
Confidence            568888999999999999999999888763                 1123332      4677665  56666665444


Q ss_pred             CCCCC-CCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHH
Q psy10669        192 PSLQG-GPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELV  270 (337)
Q Consensus       192 p~~~g-~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~  270 (337)
                      |...+ ++++..+++...++..+  .+.++.++++.++.+++.+.|.+.|+++..  .+.+++++.+.+. .+..++.+.
T Consensus       266 ~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~--~~~~~~~i~~~~~-~~~~~l~~~  340 (393)
T TIGR01822       266 PYLFSNSLPPAVVGASIKVLEML--EASNELRDRLWANTRYFRERMEAAGFDIKP--ADHPIIPVMLYDA-VLAQRFARR  340 (393)
T ss_pred             cceecCCCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHcCCCCCC--CCCCEEEEEeCCH-HHHHHHHHH
Confidence            54443 45556666666666544  245678899999999999999998988754  3455666654432 246677777


Q ss_pred             HhhcCceec
Q psy10669        271 LEEIAIACN  279 (337)
Q Consensus       271 L~~~gI~v~  279 (337)
                      |.+.||.+.
T Consensus       341 L~~~gI~v~  349 (393)
T TIGR01822       341 LLEEGIYVT  349 (393)
T ss_pred             HHHCCeeEe
Confidence            877799986

This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.

>PRK05937 8-amino-7-oxononanoate synthase; Provisional

Probab=99.78  E-value=5.5e-17  Score=158.14  Aligned_cols=239  Identities=15%  Similarity=0.108  Sum_probs=164.9

Q ss_pred             cceeeeccCCCC----CHHHHHHHhhhhhhcc-------CCCCCCCcCcCccch-HHHHHHHHHHHHHhhcCCCCCCCcc
Q psy10669         31 NGIELIASENFT----SLAVLECLGSCLQNKY-------SEGLPGKRYYGGNQF-IDEIEIVAQQRSLKAFNLDPEQWGC   98 (337)
Q Consensus        31 ~~i~l~asen~~----~p~V~~a~~~~l~~~y-------~~g~~g~r~~~G~~~-~~~lE~~~~~~~a~lfg~~~~~~~~   98 (337)
                      ..+..++||||+    +|.+.+++...+ .+|       +.|..|+|.+.|+.. ++++|    ++++++||+++     
T Consensus         4 ~~~~~~~s~~YL~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e----~~la~~~~~~~-----   73 (370)
T PRK05937          4 SLSIDFVTNDFLGFSRSDTLVHEVEKRY-RLYCRQFPHAQLGYGGSRAILGPSSLLDDLE----HKIAHFHGAPE-----   73 (370)
T ss_pred             CceEEeECCCccCCCCCHHHHHHHHHHH-HHhccccCCCCCCCCCcCcccCChHHHHHHH----HHHHHHhCCCe-----
Confidence            457799999999    889988887653 456       478899999999854 47887    58899999975     


Q ss_pred             eeecCCCchhHHHHHHhhCCc-------------------------------------c-cc------c-ccEEEEcCcc
Q psy10669         99 NVQPYSGSPANFAVCEKALPT-------------------------------------N-NA------R-FDFLSSGTTC  133 (337)
Q Consensus        99 ~v~~~Sgt~AN~~v~~aLl~~-------------------------------------~-~a------~-pklII~~~S~  133 (337)
                      .+.|+||+.||+++...+.++                                     + +.      + +++|++. +.
T Consensus        74 ~l~~~sG~~a~~~~~~~~~~~~d~ii~d~~~H~sv~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~v~-~v  152 (370)
T PRK05937         74 AFIVPSGYMANLGLCAHLSSVTDYVLWDEQVHISVVYSLSVISGWHQSFRHNDLDHLESLLESCRQRSFGRIFIFVC-SV  152 (370)
T ss_pred             EEEECChHHHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHHcCCceEEecCCCHHHHHHHHHhhhccCCCcEEEEEe-cC
Confidence            599999999999987776432                                     0 01      1 2344444 34


Q ss_pred             c---ccccChHHHHHHhhhcCCeEEEeccccccccc--e--------------eeeec-----cCCchhhh--hHHHHHh
Q psy10669        134 Y---SRCLDYARFRQICDETDSIMFADMSHISGLIA--G--------------VKGVT-----KTGEKILY--DYEEKIN  187 (337)
Q Consensus       134 ~---~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~--g--------------~~~T~-----~~Gg~i~~--~l~~~i~  187 (337)
                      +   +...|+++|.++|+++|++|+||+||+.|.++  +              +..|.     +.|+.+++  ++.+.+.
T Consensus       153 ~s~~G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~g~~G~~vl~~~~~~~~~~  232 (370)
T PRK05937        153 YSFKGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALGSMGAALLSSSEVKQDLM  232 (370)
T ss_pred             CCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhhhcCceEEEcCHHHHHHHH
Confidence            4   45667778889999999999999999999876  1              12333     24655554  4444333


Q ss_pred             hccCCCC-CCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHH
Q psy10669        188 NAVFPSL-QGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSK  266 (337)
Q Consensus       188 ~~~~p~~-~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~  266 (337)
                      ....|.. .++.+++.++++..++..+. ......++++.++.++|.+.|...+        ..+..++.+..  ..+.+
T Consensus       233 ~~~~~~~~s~~~~~~~~~a~~aal~~l~-~~~~~~~~~l~~l~~~l~~~l~~~~--------~~~~~~i~~~~--~~~~~  301 (370)
T PRK05937        233 LNSPPLRYSTGLPPHLLISIQVAYDFLS-QEGELARKQLFRLKEYFAQKFSSAA--------PGCVQPIFLPG--ISEQE  301 (370)
T ss_pred             HhCCCCeecCCCCHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHhcCCCC--------CCCEEEEEeCC--hhHHH
Confidence            2223444 34567778888888887764 3445677888888888888775432        12334555543  35678


Q ss_pred             HHHHHhhcCceeccCc-----ccchhhhhH
Q psy10669        267 VELVLEEIAIACNKNT-----GISLAAEIQ  291 (337)
Q Consensus       267 ~~~~L~~~gI~v~~~~-----girig~~~~  291 (337)
                      +.+.|++.||.+....     .|||.....
T Consensus       302 ~~~~L~~~gi~v~~~~~~~~~~iRis~~~~  331 (370)
T PRK05937        302 LYSKLVETGIRVGVVCFPTGPFLRVNLHAF  331 (370)
T ss_pred             HHHHHHHCCeeEEeeCCCCCCEEEEEcCCC
Confidence            8889998999887322     578865443

>PLN02822 serine palmitoyltransferase

Probab=99.77  E-value=6.3e-17  Score=163.10  Aligned_cols=238  Identities=14%  Similarity=0.138  Sum_probs=170.4

Q ss_pred             cceeeeccCCCC----CHHHHHHHhhhhhhccCCCCCCCcCcCccchH-HHHHHHHHHHHHhhcCCCCCCCcceeecCCC
Q psy10669         31 NGIELIASENFT----SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFI-DEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG  105 (337)
Q Consensus        31 ~~i~l~asen~~----~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~-~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg  105 (337)
                      +.+..++|.||+    +|.+++++... ..+|+.|+.|+|.+.|+... .++|    ++++++++.++     +|.+++|
T Consensus       109 ~~~id~~s~~~lgl~~~~~i~ea~~~a-l~~~G~g~~g~r~~yg~~~~~~~Le----e~La~~~~~~~-----~i~~s~G  178 (481)
T PLN02822        109 KDVVNFASANYLGLIGNEKIKESCTSA-LEKYGVGSCGPRGFYGTIDVHLDCE----TKIAKFLGTPD-----SILYSYG  178 (481)
T ss_pred             ceEEEeECCCcCCCCCCHHHHHHHHHH-HHHhCCCCcccCccccCHHHHHHHH----HHHHHHhCCCC-----EEEECCH
Confidence            445567889996    89999999876 56889999999987777554 5787    68899999875     6999999


Q ss_pred             chhHHHHHHhhCCc-----------------------------------------c--cc-----cc-cEEEEcCccccc
Q psy10669        106 SPANFAVCEKALPT-----------------------------------------N--NA-----RF-DFLSSGTTCYSR  136 (337)
Q Consensus       106 t~AN~~v~~aLl~~-----------------------------------------~--~a-----~p-klII~~~S~~~~  136 (337)
                      +.+|.+++.+++++                                         +  ..     ++ ++||+. +.|++
T Consensus       179 ~~a~~sai~a~~~~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~~~nd~~~l~~~l~~~~~~~~~~~~~~~~Ivve-~i~~~  257 (481)
T PLN02822        179 LSTIFSVIPAFCKKGDIIVADEGVHWGIQNGLYLSRSTIVYFKHNDMESLRNTLEKLTAENKRKKKLRRYIVVE-AIYQN  257 (481)
T ss_pred             HHHHHHHHHHhCCCCCEEEEeCCccHHHHHHHHHcCCeEEEECCCCHHHHHHHHHHHhhhhcccCCCcEEEEEe-cCCCC
Confidence            88999999999765                                         0  01     13 466664 56654


Q ss_pred             ---ccChHHHHHHhhhcCCeEEEeccccccccc--e----------------eeeec-c----CCchhhh--hHHHHHhh
Q psy10669        137 ---CLDYARFRQICDETDSIMFADMSHISGLIA--G----------------VKGVT-K----TGEKILY--DYEEKINN  188 (337)
Q Consensus       137 ---~~d~~~l~eia~~~ga~l~vD~AH~~Gli~--g----------------~~~T~-~----~Gg~i~~--~l~~~i~~  188 (337)
                         ..|+++|.++|++||++|++|++|+.|+++  |                ++++. |    .||++++  ++.+.+..
T Consensus       258 ~G~i~~L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg~~GG~i~g~~~ii~~~~~  337 (481)
T PLN02822        258 SGQIAPLDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALATEGGFCTGSARVVDHQRL  337 (481)
T ss_pred             CCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhhhCCeEEEcCHHHHHHHHh
Confidence               455667778999999999999999999886  2                12232 2    4888887  56666665


Q ss_pred             ccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCC-Cc---c
Q psy10669        189 AVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKN-KL---T  263 (337)
Q Consensus       189 ~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~-~~---~  263 (337)
                      ...+++++++.++..++.+.+..+..+ +.++.++++.+|.++|.+.|.+. |+++.. ...++++++.++.. +.   +
T Consensus       338 ~~~~~~fsa~lPp~~~~Aa~~aL~~l~-~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~-~~~spi~~l~l~~~~~~~~~~  415 (481)
T PLN02822        338 SSSGYVFSASLPPYLASAAITAIDVLE-DNPSVLAKLKENIALLHKGLSDIPGLSIGS-NTLSPIVFLHLEKSTGSAKED  415 (481)
T ss_pred             cCCceeeccccCHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHhcCCcccCC-CCCCCEEEEEeCCCcccccch
Confidence            445566766655554444433334433 35788999999999999999985 888753 36789999998643 10   1


Q ss_pred             ---hHHHHHHH-hhcCceeccC
Q psy10669        264 ---GSKVELVL-EEIAIACNKN  281 (337)
Q Consensus       264 ---~~~~~~~L-~~~gI~v~~~  281 (337)
                         ..++.+.| ++.||.+.+.
T Consensus       416 ~~~~~~~~~~Ll~e~GV~v~~~  437 (481)
T PLN02822        416 LSLLEHIADRMLKEDSVLVVVS  437 (481)
T ss_pred             HHHHHHHHHHHHhcCCEEEEee
Confidence               24455555 4789999853

>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]

Probab=99.76  E-value=2.1e-16  Score=155.86  Aligned_cols=237  Identities=12%  Similarity=0.115  Sum_probs=179.9

Q ss_pred             CCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHhh--
Q psy10669         40 NFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEKA--  116 (337)
Q Consensus        40 n~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~aL--  116 (337)
                      -.+|..|.+++...+. +| .+++++..+.-.....+.++.+|+.+++|+|++++   .+|.|++| |.+...+..++  
T Consensus        32 ~~~p~~V~~a~~~~~~-~~-~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~---~eIvft~~tT~aln~va~~l~~  106 (405)
T COG0520          32 SQKPQAVLDAVAEYYR-RY-NANVHRGAHTLAEEATDLYEAAREAVARFLNADSS---DEIVFTRGTTEALNLVARGLGR  106 (405)
T ss_pred             ccCCHHHHHHHHHHHH-hh-cCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCC---CeEEEeCChhHHHHHHHHHhhh
Confidence            3369999999986543 33 47788888888888888888999999999999952   36999999 56644444666  


Q ss_pred             -CCc---------------------------------------------cc-c--cccEEEEcCcc--cccccChHHHHH
Q psy10669        117 -LPT---------------------------------------------NN-A--RFDFLSSGTTC--YSRCLDYARFRQ  145 (337)
Q Consensus       117 -l~~---------------------------------------------~~-a--~pklII~~~S~--~~~~~d~~~l~e  145 (337)
                       +++                                             +. -  ++|+|.+++-+  .+...|+++|.+
T Consensus       107 ~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~~g~~~~~~~~~~i~~~Tklvais~vSn~tG~~~pv~~I~~  186 (405)
T COG0520         107 SLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDDDGLLDLDALEKLITPKTKLVALSHVSNVTGTVNPVKEIAE  186 (405)
T ss_pred             hhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecCCCCCcCHHHHHHhcCCCceEEEEECccccccccchHHHHHH
Confidence             332                                             10 0  26899998444  369999999999


Q ss_pred             HhhhcCCeEEEeccccccccce---------eeeeccC------C-chhh-h-hHHHHHhhc------------------
Q psy10669        146 ICDETDSIMFADMSHISGLIAG---------VKGVTKT------G-EKIL-Y-DYEEKINNA------------------  189 (337)
Q Consensus       146 ia~~~ga~l~vD~AH~~Gli~g---------~~~T~~~------G-g~i~-~-~l~~~i~~~------------------  189 (337)
                      +|+++|++++||+||++|.+..         +.+++||      | |++. . ++.+.+.+.                  
T Consensus       187 la~~~ga~v~VDaaq~~~h~~idv~~l~~Df~afsgHKwl~gP~GiGvLy~r~~~l~~l~P~~~gg~~~~~~~~~~~~~~  266 (405)
T COG0520         187 LAHEHGALVLVDAAQAAGHLPIDVQELGCDFLAFSGHKWLLGPTGIGVLYVRKELLEELEPFLGGGGMIEYVSRDEGVTL  266 (405)
T ss_pred             HHHHcCCEEEEECccccCccCCCchhcCCCEEEEcccccccCCCceEEEEEchHHHhhcCCcccCCCceeeecccccccc
Confidence            9999999999999999999981         3344333      4 4433 2 444333221                  


Q ss_pred             ---cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-CCCEEecCCCCCeEEEEEecCCCcchH
Q psy10669        190 ---VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-RGYHVVTGGTDVHLILIDLRKNKLTGS  265 (337)
Q Consensus       190 ---~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~G~~v~~~~t~~h~v~V~~~~~~~~~~  265 (337)
                         -.-+-.|||+..++.++..|++++++....+..++..++++++.+.|.+ .|+++++...+....++.+.-.+....
T Consensus       267 ~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~~~~~~  346 (405)
T COG0520         267 AELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYLLEGLSELPGVEIYGPPDADRGGIVSFNVKGIHPH  346 (405)
T ss_pred             cCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCcccCceEEEEEeCCCCHH
Confidence               0111259999999999999999998877789999999999999999998 579998733345677788888888999


Q ss_pred             HHHHHHhhcCceeccC
Q psy10669        266 KVELVLEEIAIACNKN  281 (337)
Q Consensus       266 ~~~~~L~~~gI~v~~~  281 (337)
                      ++...|.+.||.++.-
T Consensus       347 dv~~~L~~~gI~vr~g  362 (405)
T COG0520         347 DVATLLDEKGIAVRAG  362 (405)
T ss_pred             HHHHHHHhCCeEEEec
Confidence            9999999999988864

>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I)

Probab=99.69  E-value=4.1e-15  Score=142.44  Aligned_cols=234  Identities=16%  Similarity=0.167  Sum_probs=165.4

Q ss_pred             eeeeccCCCC----CHHHHHHHhhhhhhccCCCCCCCcCcCcc-chHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCch
Q psy10669         33 IELIASENFT----SLAVLECLGSCLQNKYSEGLPGKRYYGGN-QFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSP  107 (337)
Q Consensus        33 i~l~asen~~----~p~V~~a~~~~l~~~y~~g~~g~r~~~G~-~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~  107 (337)
                      ...++|+.|+    +|+|++++...+. +|+.+..+.+.+.|. ....+++    +.+++++|+++     .+.++||+.
T Consensus         3 ~~~~~~~~~~~~~~~~~v~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~----~~la~~~~~~~-----~iv~~sg~~   72 (349)
T cd06454           3 VLNFCSNDYLGLANHPEVIEAAKEALD-KYGVGAGGSRLISGTSDLHEELE----EELAEFHGKEA-----ALVFSSGYA   72 (349)
T ss_pred             ceecccCCccccCCCHHHHHHHHHHHH-HhCCCCCCcCeecCCchHHHHHH----HHHHHHhCCCC-----EEEeccHHH
Confidence            3457899999    8999999998765 565555555666564 3335665    57889999875     588899999


Q ss_pred             hHHHHHHhhCCc-----------------------------------------cc---ccccEEEEcC--cccccccChH
Q psy10669        108 ANFAVCEKALPT-----------------------------------------NN---ARFDFLSSGT--TCYSRCLDYA  141 (337)
Q Consensus       108 AN~~v~~aLl~~-----------------------------------------~~---a~pklII~~~--S~~~~~~d~~  141 (337)
                      +|.+++.+++++                                         +.   .++++++++.  +..++..|++
T Consensus        73 a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~~~  152 (349)
T cd06454          73 ANDGVLSTLAGKGDLIISDSLNHASIIDGIRLSGAKKRIFKHNDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAPLP  152 (349)
T ss_pred             HHHHHHHHhcCCCCEEEEehhhhHHHHHHHHHcCCceEEecCCCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccCHH
Confidence            999888888754                                         10   1256676653  2235778999


Q ss_pred             HHHHHhhhcCCeEEEeccccccccc-----------------eeeeec-c----CCchhhh--hHHHHHhhccCCCC-CC
Q psy10669        142 RFRQICDETDSIMFADMSHISGLIA-----------------GVKGVT-K----TGEKILY--DYEEKINNAVFPSL-QG  196 (337)
Q Consensus       142 ~l~eia~~~ga~l~vD~AH~~Gli~-----------------g~~~T~-~----~Gg~i~~--~l~~~i~~~~~p~~-~g  196 (337)
                      +|.++|+++|+++++|++|..|.++                 .+.+++ |    .||+++.  ++.+.+.....+.. .+
T Consensus       153 ~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~gG~i~~~~~~~~~~~~~~~~~~~~~  232 (349)
T cd06454         153 ELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGAVGGYIAGSKELIDYLRSYARGFIFST  232 (349)
T ss_pred             HHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcccCCEEECCHHHHHHHHHhchhhhccC
Confidence            9999999999999999999887653                 112333 2    4777765  45555555444443 34


Q ss_pred             CCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCc
Q psy10669        197 GPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAI  276 (337)
Q Consensus       197 ~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI  276 (337)
                      +.+++.++++..++..+.+  ++..++++.++.++|.+.|.+.|+.+..  ...+.+++.+...+.+..++.+.|.+.||
T Consensus       233 ~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~l~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~L~~~gI  308 (349)
T cd06454         233 SLPPAVAAAALAALEVLQG--GPERRERLQENVRYLRRGLKELGFPVGG--SPSHIIPPLIGDDPAKAVAFSDALLERGI  308 (349)
T ss_pred             CCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhcCCcccC--CCCCcEEEEeCCChHHHHHHHHHHHhCCc
Confidence            6777788888888877643  6778999999999999999999988765  22344333333323466788888888899


Q ss_pred             eecc
Q psy10669        277 ACNK  280 (337)
Q Consensus       277 ~v~~  280 (337)
                      .+..
T Consensus       309 ~~~~  312 (349)
T cd06454         309 YVQA  312 (349)
T ss_pred             eEEE
Confidence            9874

The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.

>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]

Probab=99.69  E-value=2.3e-15  Score=145.27  Aligned_cols=235  Identities=17%  Similarity=0.137  Sum_probs=169.3

Q ss_pred             cCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHhh
Q psy10669         38 SENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEKA  116 (337)
Q Consensus        38 sen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~aL  116 (337)
                      ..-.++|+|+++|...+...  .|+|.| .+.-...+.++.+.||+.++++.|+++    ..|.|+|| |.+|..++.+.
T Consensus         9 ATTp~~~~v~~~m~~~~~~~--fgNPsS-~H~~G~~A~~~ve~AR~~iA~llga~~----~eIiFTSG~TEsnNlaI~g~   81 (386)
T COG1104           9 ATTPVDPEVLEAMLPYLTEV--FGNPSS-LHSFGREARKAVEEAREQIAKLLGADP----EEIIFTSGATESNNLAIKGA   81 (386)
T ss_pred             ccCCCCHHHHHHHHHHHHhh--cCCccc-hhHhHHHHHHHHHHHHHHHHHHhCCCC----CeEEEecCCcHHHHHHHHhh
Confidence            34456999999999887765  489998 555455666666789999999999998    37999998 88876666773


Q ss_pred             C--C-----c-------------------------------------------ccc-cc--cEEEEcCcc--cccccChH
Q psy10669        117 L--P-----T-------------------------------------------NNA-RF--DFLSSGTTC--YSRCLDYA  141 (337)
Q Consensus       117 l--~-----~-------------------------------------------~~a-~p--klII~~~S~--~~~~~d~~  141 (337)
                      +  .     .                                           +.+ +|  .||.+.+.+  .+..+|++
T Consensus        82 ~~a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~~G~v~~e~L~~al~~~T~LVSim~aNnE~G~IQpI~  161 (386)
T COG1104          82 ALAYRNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDSNGLVDLEQLEEALRPDTILVSIMHANNETGTIQPIA  161 (386)
T ss_pred             HHhhhcccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCCCCeEcHHHHHHhcCCCceEEEEEecccCeeecccHH
Confidence            1  1     0                                           111 24  455454544  48999999


Q ss_pred             HHHHHhhhcCCeEEEeccccccccce---------eeee-c----cCC-chh-hh---hHHHHHhh--ccCCCCCCCCcH
Q psy10669        142 RFRQICDETDSIMFADMSHISGLIAG---------VKGV-T----KTG-EKI-LY---DYEEKINN--AVFPSLQGGPHN  200 (337)
Q Consensus       142 ~l~eia~~~ga~l~vD~AH~~Gli~g---------~~~T-~----~~G-g~i-~~---~l~~~i~~--~~~p~~~g~~~~  200 (337)
                      +|.+||+++|+++.+|+.|+.|-++.         ++++ |    ||| |++ +.   .+...+.-  .-+....||.+.
T Consensus       162 ei~~i~k~~~i~fHvDAvQa~Gkipi~~~~~~vD~ls~SaHK~~GpkGiGaLyv~~~~~~~p~i~GGgQE~g~RsGTenv  241 (386)
T COG1104         162 EIGEICKERGILFHVDAVQAVGKIPIDLEELGVDLLSFSAHKFGGPKGIGALYVRPGVRLEPLIHGGGQERGLRSGTENV  241 (386)
T ss_pred             HHHHHHHHcCCeEEEehhhhcCceeccccccCcceEEeehhhccCCCceEEEEECCCCccCceeccCcCCCCCCCCCccH
Confidence            99999999999999999999999991         2333 2    455 444 32   12222221  112223689999


Q ss_pred             HHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh--CCCEEecC--CCCCeEEEEEecCCCcchHHHHHHHhhcCc
Q psy10669        201 HAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK--RGYHVVTG--GTDVHLILIDLRKNKLTGSKVELVLEEIAI  276 (337)
Q Consensus       201 ~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~--~G~~v~~~--~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI  276 (337)
                      |+|+|++.|+.... .+++...+++.+.-++|.+.|.+  .++.+.+.  ..-+|++.+.+  .++.+..+-..|+.+||
T Consensus       242 ~~Ivg~~~A~~~a~-~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f--~gv~gE~ll~~L~~~gI  318 (386)
T COG1104         242 PGIVGFGKAAEIAV-EELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSF--PGVEGESLLLALDLAGI  318 (386)
T ss_pred             HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEe--CCCcHHHHHHhccccCe
Confidence            99999999999986 57788899999999999999997  45555542  12355555544  46789999999999999


Q ss_pred             eeccCc
Q psy10669        277 ACNKNT  282 (337)
Q Consensus       277 ~v~~~~  282 (337)
                      .+..-+
T Consensus       319 ~vStGS  324 (386)
T COG1104         319 AVSTGS  324 (386)
T ss_pred             EEeccc
Confidence            987644

>KOG1357|consensus

Probab=99.69  E-value=4.7e-16  Score=149.95  Aligned_cols=230  Identities=15%  Similarity=0.126  Sum_probs=167.8

Q ss_pred             eeeeccCCCC---------CHHHHHHHhhhhhhccCCCCCCCcCcCccchH-HHHHHHHHHHHHhhcCCCCCCCcceeec
Q psy10669         33 IELIASENFT---------SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFI-DEIEIVAQQRSLKAFNLDPEQWGCNVQP  102 (337)
Q Consensus        33 i~l~asen~~---------~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~-~~lE~~~~~~~a~lfg~~~~~~~~~v~~  102 (337)
                      ...+.|=||+         .+.+.+++     .+|+....++|-..|+... .++|.    ..|+|+|.++     ++.|
T Consensus       138 ~lNlgSYNYLGFa~~~g~ca~~~~~~~-----~kygl~~css~~e~G~~~~hkelE~----l~A~f~g~e~-----a~vF  203 (519)
T KOG1357|consen  138 CLNLGSYNYLGFAQSVGPCAEASLKSF-----DKYGLSRCSSRHEAGTTEEHKELEE----LVARFLGVED-----AIVF  203 (519)
T ss_pred             eeeecccccccccccCCcCChHHHHHH-----HHhcccccccchhcccHHHHHHHHH----HHHHhcCCcc-----eEEE
Confidence            3456889998         45555544     4788888899999999666 58994    5689999997     7999


Q ss_pred             CCCchhHHHHHHhhCCc-------------------------------------------------ccccc--cEEEEcC
Q psy10669        103 YSGSPANFAVCEKALPT-------------------------------------------------NNARF--DFLSSGT  131 (337)
Q Consensus       103 ~Sgt~AN~~v~~aLl~~-------------------------------------------------~~a~p--klII~~~  131 (337)
                      .-|+.+|-..+.+|+.+                                                 +..+|  |++|+.+
T Consensus       204 ~mGf~TNs~~~p~l~~~gsLIiSDelNHaSi~~GaRLSgAtiRVfkHNdm~~LEr~Lrd~I~~gqP~Thrp~kki~iive  283 (519)
T KOG1357|consen  204 SMGFATNSMNIPSLLGKGSLIISDELNHASLITGARLSGATTRVFRHNDMQGLERLLRDAIVYGQPKTHRPWKKILICVE  283 (519)
T ss_pred             eccccccccCcceeecCCcceeeccccchheeccccccCceEEEEecCCHHHHHHHHHHHHhcCCCCcCCcchheeeeec
Confidence            99999999999999765                                                 11123  7888888


Q ss_pred             cccccccChH---HHHHHhhhcCCeEEEeccccccccc----e--------------eeeecc-----CCchhhh--hHH
Q psy10669        132 TCYSRCLDYA---RFRQICDETDSIMFADMSHISGLIA----G--------------VKGVTK-----TGEKILY--DYE  183 (337)
Q Consensus       132 S~~~~~~d~~---~l~eia~~~ga~l~vD~AH~~Gli~----g--------------~~~T~~-----~Gg~i~~--~l~  183 (337)
                      ..|+|.+-+-   ++.++++++.++|+.|+||+.|-++    |              +++|++     .||+|.+  ++.
T Consensus       284 giysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga~GGyiagsk~li  363 (519)
T KOG1357|consen  284 GIYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGAAGGYIAGSKELI  363 (519)
T ss_pred             cceeccCeecccHHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhcccccceecCcHHHH
Confidence            8998776555   5557889999999999999999997    1              244543     3788887  577


Q ss_pred             HHHhhccCCCCCCCCcHHHHHHHHHHHHHHh-----chhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEec
Q psy10669        184 EKINNAVFPSLQGGPHNHAIGAIATAMLQAQ-----SDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLR  258 (337)
Q Consensus       184 ~~i~~~~~p~~~g~~~~~~iaala~a~~e~~-----~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~  258 (337)
                      +.+....-...+++..+|.+|.-.....+++     +..+.+..+|+.+|+++|+..|.+.||-++ |..|++++|+.+-
T Consensus       364 d~lrt~s~~~~yat~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~gfivy-G~~dSpVvplll~  442 (519)
T KOG1357|consen  364 DYLRTPSPSALYATSLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKMGFIVY-GNNDSPVVPLLLY  442 (519)
T ss_pred             hhhccCCCceeecccCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcCcEEEe-cCCCCCcceeeec
Confidence            7766442223366667777776665555544     234578899999999999999999999877 4688999998876


Q ss_pred             CCCcchHHHHHHHhhcCcee
Q psy10669        259 KNKLTGSKVELVLEEIAIAC  278 (337)
Q Consensus       259 ~~~~~~~~~~~~L~~~gI~v  278 (337)
                      .....+. ..+.|-+.+|-+
T Consensus       443 ~~~k~~~-f~r~~l~~nigv  461 (519)
T KOG1357|consen  443 GPAKIVA-FSREMLERNIGV  461 (519)
T ss_pred             CcccccH-HHHHHHhcCceE
Confidence            6553444 444444434443

>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase

Probab=99.68  E-value=5.3e-15  Score=144.20  Aligned_cols=242  Identities=13%  Similarity=0.110  Sum_probs=156.4

Q ss_pred             cceeeec--cCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccc------hHHHHHHHHHHHHHhhcCCCCCCCcceeec
Q psy10669         31 NGIELIA--SENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQ------FIDEIEIVAQQRSLKAFNLDPEQWGCNVQP  102 (337)
Q Consensus        31 ~~i~l~a--sen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~------~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~  102 (337)
                      .+|||-|  +-..+...+.+++     .+|+.|+.++|+.+|+.      .+++++    +.+++++|++.     .+.+
T Consensus         7 ~~~~~~~~~~~g~~~~~~~~a~-----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----e~lA~~~g~~~-----~~i~   72 (370)
T TIGR02539         7 GSINLNPLQRGGVLTEAARKAL-----VEFGDGYSVCDFCGGRLDQITKPPIHDFL----EDLAEFLGMDE-----ARVT   72 (370)
T ss_pred             cccccChhhhCCCCcHHHHHHH-----HHHhhccccccccccccccccchHHHHHH----HHHHHHhCCCc-----eEEE
Confidence            3455543  2333444454444     46788999999988875      344444    56899999986     3456


Q ss_pred             CCCchhHHHHHHhhCCc---------------------------------------------ccc--------cccEEEE
Q psy10669        103 YSGSPANFAVCEKALPT---------------------------------------------NNA--------RFDFLSS  129 (337)
Q Consensus       103 ~Sgt~AN~~v~~aLl~~---------------------------------------------~~a--------~pklII~  129 (337)
                      ++|+.+|.+++.+++++                                             .+.        ++++|++
T Consensus        73 ~g~~~a~~~~~~~l~~~gd~Vl~~~~~h~s~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~  152 (370)
T TIGR02539        73 HGAREGKFAVMHALCKEGDWVVLDGLAHYTSYVAAERAGLNVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALL  152 (370)
T ss_pred             CChHHHHHHHHHHhhCCCCEEEECCcccHHHHHHHHHcCCEEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEE
Confidence            77799999999999754                                             000        1356776


Q ss_pred             c--CcccccccChHHHHHHhhhcCCeEEEeccccccccc---------eeeeeccC-----C--chhhh--hHHHHHhhc
Q psy10669        130 G--TTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA---------GVKGVTKT-----G--EKILY--DYEEKINNA  189 (337)
Q Consensus       130 ~--~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T~~~-----G--g~i~~--~l~~~i~~~  189 (337)
                      .  .+.++...|+++|.++|+++|+++++|+||+.|.++         .+++|.+|     |  |+++.  ++.+.+.+.
T Consensus       153 ~~p~~~~G~~~~l~~i~~la~~~~~~livDea~~~g~~~~~~~~~~~di~v~s~sK~~~~~g~~G~l~~~~~~i~~l~~~  232 (370)
T TIGR02539       153 THVDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGRMPVSAKEIGADFIVGSGHKSMAASGPCGVLGMSEEWEDIVLRK  232 (370)
T ss_pred             ECCCCCCccccCHHHHHHHHHHcCCeEEEECccccCCcCCCHHHcCCCEEEeeCcccccCCCCEEEEEECHHHHhhhccc
Confidence            4  233567788888999999999999999999999765         13455432     4  66654  566666554


Q ss_pred             cCCCCC-------CCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEec-CCCCCeEEEEEecCC-
Q psy10669        190 VFPSLQ-------GGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVT-GGTDVHLILIDLRKN-  260 (337)
Q Consensus       190 ~~p~~~-------g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~-~~t~~h~v~V~~~~~-  260 (337)
                      ..|...       +++.....+++..++.++.  ++-+...+..+++++|++.|.+.|+++++ ..++++++.+++... 
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~--~~l~~~~~~~~~~~~l~~~L~~~g~~~~~~~~s~t~~v~~~~~~~~  310 (370)
T TIGR02539       233 SRYSPVKEVELLGCTSRGAPIVTMMASFPHVV--ERVKRWDEEVKKTRWFVAELEDIGFIQLGQKPKEHDLVKFETPGFH  310 (370)
T ss_pred             ccCCccceeeeecccccccHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhCCcEEEccCCCcCceEEEECCchh
Confidence            444322       3333344555555554432  22233456677789999999999999863 347788888876421 


Q ss_pred             ------CcchHHHHHHHhhcCce-eccCc--ccchhh
Q psy10669        261 ------KLTGSKVELVLEEIAIA-CNKNT--GISLAA  288 (337)
Q Consensus       261 ------~~~~~~~~~~L~~~gI~-v~~~~--girig~  288 (337)
                            ...+..+.+.|.+.||. +....  -|||+.
T Consensus       311 ~~~~~~~~~~~~~~~~L~e~GI~~ir~~~~~~iRis~  347 (370)
T TIGR02539       311 EIAQKHKRRGYFLYEELKKRGIHGIRSGQTKYFKLSV  347 (370)
T ss_pred             HHhhhhccccHHHHHHHHhCCCccccCCcceEEEEEe
Confidence                  11345688888888997 44321  466653

Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.

>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional

Probab=99.66  E-value=2.9e-14  Score=142.95  Aligned_cols=250  Identities=14%  Similarity=0.148  Sum_probs=171.5

Q ss_pred             ccceeeeccC---CCCCHH----HHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeec
Q psy10669         30 INGIELIASE---NFTSLA----VLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQP  102 (337)
Q Consensus        30 ~~~i~l~ase---n~~~p~----V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~  102 (337)
                      .+.|+|-..+   ++.+|.    +.+++...+..       |...|+++..+.+++    +.++++|+.++     .+..
T Consensus        36 ~~~~~L~~g~p~~D~~tds~t~a~~~a~~~a~~~-------g~~~Y~~~~g~~~Lr----eaia~~~~~~~-----vv~t   99 (460)
T PRK13238         36 YNPFLLKSEDVFIDLLTDSGTGAMSDRQWAAMMR-------GDEAYAGSRSYYRLE----DAVKDIFGYPY-----TIPT   99 (460)
T ss_pred             CCEEeCCCCCCCCCCCCCCCchhhhHHHHHHHHh-------CCcccCCCCCHHHHH----HHHHHHhCCCc-----EEEC
Confidence            3556665555   455544    56666555432       334577777788887    57889999875     4666


Q ss_pred             CCCchhHHHHHHhhCCc------------------------------c-------------c---------c-----ccc
Q psy10669        103 YSGSPANFAVCEKALPT------------------------------N-------------N---------A-----RFD  125 (337)
Q Consensus       103 ~Sgt~AN~~v~~aLl~~------------------------------~-------------~---------a-----~pk  125 (337)
                      +||+.|+..++.+++++                              +             +         .     +++
T Consensus       100 ~ggt~A~~~~~~all~pGDVii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~~~tk  179 (460)
T PRK13238        100 HQGRAAEQILFPVLIKKGDVVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVGAENVP  179 (460)
T ss_pred             CCHHHHHHHHHHHhCCCCCEEccCCcccchHHHHHHcCCEEEEEeccccccccccccccCCcCHHHHHHHHhhcCCCcee
Confidence            77799999889998764                              0             0         0     145


Q ss_pred             EEEEcCcccc---cccC---hHHHHHHhhhcCCeEEEecccccc-----------ccc---------------eeeeecc
Q psy10669        126 FLSSGTTCYS---RCLD---YARFRQICDETDSIMFADMSHISG-----------LIA---------------GVKGVTK  173 (337)
Q Consensus       126 lII~~~S~~~---~~~d---~~~l~eia~~~ga~l~vD~AH~~G-----------li~---------------g~~~T~~  173 (337)
                      +|+++..+++   ...+   +++|+++|+++|++|+.|+||..+           .-.               .+++|++
T Consensus       180 ~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~  259 (460)
T PRK13238        180 FIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAK  259 (460)
T ss_pred             EEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcEEEEecc
Confidence            7777644433   3334   567889999999999999999763           111               1234443


Q ss_pred             ------CCchhhh---hHHHHHhhccC--CC--CCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC
Q psy10669        174 ------TGEKILY---DYEEKINNAVF--PS--LQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG  240 (337)
Q Consensus       174 ------~Gg~i~~---~l~~~i~~~~~--p~--~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G  240 (337)
                            .||+++.   ++.++++...+  ++  .+|+++.+.++|+++++.+..+.   +|.+..+++.++|.+.|.+.|
T Consensus       260 K~g~~~~GG~i~~~d~~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~~~---~~~~~~~~~~~~l~~~L~~~G  336 (460)
T PRK13238        260 KDAMVNIGGLLCFRDEDLFTECRTLCILYEGFPTYGGLAGRDMEALAVGLYEGMDE---DYLAYRIGQVEYLGEGLEEAG  336 (460)
T ss_pred             cCCCCcceeEEEcChHHHHHHhhhcccccCCcccccCcHHHHHHHHHhhHHHhhCh---HHHHHHHHHHHHHHHHHHHCC
Confidence                  3778875   47777776643  23  36777777899999999987653   556666778999999999999


Q ss_pred             CEEecCCCCCeEEEEEecCC-------Cc-chHHHHHHHhhcCceeccCc-------------------ccchhhhhHhh
Q psy10669        241 YHVVTGGTDVHLILIDLRKN-------KL-TGSKVELVLEEIAIACNKNT-------------------GISLAAEIQAI  293 (337)
Q Consensus       241 ~~v~~~~t~~h~v~V~~~~~-------~~-~~~~~~~~L~~~gI~v~~~~-------------------girig~~~~t~  293 (337)
                      ++++. ..-.|.+.+|++..       ++ +...+..+|++.||.+.+..                   .+|++.+   +
T Consensus       337 ~~~~~-p~Gg~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~~~Rla~~---r  412 (460)
T PRK13238        337 VPIQT-PAGGHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAELLRLAIP---R  412 (460)
T ss_pred             CCeEc-cCCceEEEEEchhcCCCCCCCCCchHHHHHHHHHHcCeeeecccceecccCCCCccccCCccceEEEecc---c
Confidence            99985 35569999999753       22 34455566667999986533                   7888887   7


Q ss_pred             hCCCHHHHH
Q psy10669        294 SGPKLVDFQ  302 (337)
Q Consensus       294 ~G~~~~~~~  302 (337)
                      |+++...+.
T Consensus       413 r~~~~~~~~  421 (460)
T PRK13238        413 RVYTQSHMD  421 (460)
T ss_pred             ccCCHHHHH
Confidence            787755554

>PRK10874 cysteine sulfinate desulfinase; Provisional

Probab=99.65  E-value=5.9e-14  Score=137.87  Aligned_cols=238  Identities=16%  Similarity=0.139  Sum_probs=164.9

Q ss_pred             eeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHH
Q psy10669         35 LIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVC  113 (337)
Q Consensus        35 l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~  113 (337)
                      .-++...+|+.|.+++...+.+.+  ++++++.+.......+....+|+++++++|++++   .+|.+++| +.++..++
T Consensus        24 d~a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~---~~i~~~~~~t~~i~~~~   98 (401)
T PRK10874         24 DSAATALKPQAVIEATQQFYSLSA--GNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDA---KNIVWTRGTTESINLVA   98 (401)
T ss_pred             eCCcccCCCHHHHHHHHHHHHhcc--CCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCC---CEEEEECCHHHHHHHHH
Confidence            445666779999999987665433  6665544433344444455677899999999433   36777777 67766666


Q ss_pred             HhhC----Cc---------------------------------------------ccc---cccEEEEcCccc--ccccC
Q psy10669        114 EKAL----PT---------------------------------------------NNA---RFDFLSSGTTCY--SRCLD  139 (337)
Q Consensus       114 ~aLl----~~---------------------------------------------~~a---~pklII~~~S~~--~~~~d  139 (337)
                      .++.    ++                                             +.+   ++++|++...++  +...|
T Consensus        99 ~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~t~lv~i~~~~n~tG~~~~  178 (401)
T PRK10874         99 QSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGADRLPDVDLLPELITPRTRILALGQMSNVTGGCPD  178 (401)
T ss_pred             HHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCCCCcCCHHHHHHhcCcCcEEEEEeCCcccccCcCC
Confidence            7762    22                                             001   268887764333  58899


Q ss_pred             hHHHHHHhhhcCCeEEEeccccccccc---------eeeee-c----cCC-chhhh--hHHHHHhhcc------------
Q psy10669        140 YARFRQICDETDSIMFADMSHISGLIA---------GVKGV-T----KTG-EKILY--DYEEKINNAV------------  190 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T-~----~~G-g~i~~--~l~~~i~~~~------------  190 (337)
                      +++|.++|+++|++++||++|..|.+.         .+.++ +    +.| |++..  ++.+.+.+..            
T Consensus       179 ~~~i~~l~~~~g~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (401)
T PRK10874        179 LARAITLAHQAGMVVMVDGAQGAVHFPADVQALDIDFYAFSGHKLYGPTGIGVLYGKSELLEAMSPWQGGGKMLTEVSFD  258 (401)
T ss_pred             HHHHHHHHHHcCCEEEEECCcccccccCCchhcCCCEEEEecccccCCCccEEEEEchHHHhcCCCeecCCcceEeeccC
Confidence            999999999999999999999988776         12233 2    234 55433  4444433211            


Q ss_pred             ------CC--CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCCC
Q psy10669        191 ------FP--SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKNK  261 (337)
Q Consensus       191 ------~p--~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~~  261 (337)
                            .|  .-.||++.+.++++..++..+.+..+...++++.+++++|.+.|.+. |+.+... ..+.++.+.+.  +
T Consensus       259 ~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~-~~~~i~~~~~~--~  335 (401)
T PRK10874        259 GFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRSLATLAEDALAKLPGFRSFRC-QDSSLLAFDFA--G  335 (401)
T ss_pred             ccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCC-CCCcEEEEEEC--C
Confidence                  11  12589999999999999988766666677888899999999999885 9888742 34567666654  4


Q ss_pred             cchHHHHHHHhhcCceecc
Q psy10669        262 LTGSKVELVLEEIAIACNK  280 (337)
Q Consensus       262 ~~~~~~~~~L~~~gI~v~~  280 (337)
                      +++.++.+.|.+.||.+..
T Consensus       336 ~~~~~~~~~L~~~gI~v~~  354 (401)
T PRK10874        336 VHHSDLVTLLAEYGIALRA  354 (401)
T ss_pred             cCHHHHHHHHHHCCcEEec
Confidence            5678888999989998875

>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue

Probab=99.64  E-value=5.7e-14  Score=136.60  Aligned_cols=238  Identities=18%  Similarity=0.150  Sum_probs=166.1

Q ss_pred             eccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHH
Q psy10669         36 IASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCE  114 (337)
Q Consensus        36 ~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~  114 (337)
                      .++-..+|+.|++++...+.+.+  ++|.+..+.......++-..+++++++++|++++   .+|.|+++ |.++..++.
T Consensus         5 ~~~~~~~p~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~---~~v~~~~~~t~a~~~~~~   79 (371)
T PF00266_consen    5 NAGTGPMPKSVLEAISDYLRNFY--ANPHSGVSHRSREFAEILEEAREALAKLLGAPPD---EEVVFTSNGTEALNAVAS   79 (371)
T ss_dssp             TSSS-B-BHHHHHHHHHHHHHSG--SSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTT---EEEEEESSHHHHHHHHHH
T ss_pred             CCCccCCCHHHHHHHHHHHHHhh--hcCcccccchhhhhhHHHHHHHHHHHHhcCCccc---cccccccccchhhhhhhh
Confidence            35566789999999987766544  5554444443444455555788999999999973   26777666 668877788


Q ss_pred             hh---CCc-------------------------------------------cc-----ccccEEEEcCcc--cccccChH
Q psy10669        115 KA---LPT-------------------------------------------NN-----ARFDFLSSGTTC--YSRCLDYA  141 (337)
Q Consensus       115 aL---l~~-------------------------------------------~~-----a~pklII~~~S~--~~~~~d~~  141 (337)
                      ++   +++                                           ..     .++++|++++-.  .+...|++
T Consensus        80 ~l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~~~~~~~~~~~~l~~~~~lv~~~~~~~~tG~~~pi~  159 (371)
T PF00266_consen   80 SLLNPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPGGSLDLEDLEEALNPDTRLVSISHVENSTGVRNPIE  159 (371)
T ss_dssp             HHHHHGTTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTTSSCSHHHHHHHHHTTESEEEEESBETTTTBBSSHH
T ss_pred             ccccccccccccccccccccccccccccccccchhhhccccccccchhhhhhhhhhhccccceEEeecccccccEEeeec
Confidence            88   443                                           01     127888888544  47999999


Q ss_pred             HHHHHhhhcCCeEEEeccccccccc------e---eeee-cc----CC-chhh-h-hHHHHHhhccCC------------
Q psy10669        142 RFRQICDETDSIMFADMSHISGLIA------G---VKGV-TK----TG-EKIL-Y-DYEEKINNAVFP------------  192 (337)
Q Consensus       142 ~l~eia~~~ga~l~vD~AH~~Gli~------g---~~~T-~~----~G-g~i~-~-~l~~~i~~~~~p------------  192 (337)
                      +|.++|+++|++++||++|++|.+.      +   +++. +|    .| |++. . ++.+++++...+            
T Consensus       160 ~I~~~~~~~~~~~~vD~~~~~g~~~id~~~~~~D~~~~s~~Kl~gp~G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~  239 (371)
T PF00266_consen  160 EIAKLAHEYGALLVVDAAQSAGCVPIDLDELGADFLVFSSHKLGGPPGLGFLYVRPEAIERLRPAKPGGGYLDFPSLQEY  239 (371)
T ss_dssp             HHHHHHHHTTSEEEEE-TTTTTTSS--TTTTTESEEEEESTSTTSSSTEEEEEEEHHHHHHHHTSSSSSSTTTHHHHHHH
T ss_pred             eehhhhhccCCceeEechhccccccccccccccceeeecccccCCCCchhhheehhhhhhccccccccccccccccchhc
Confidence            9999999999999999999999998      1   2333 32    34 4432 2 344444332221            


Q ss_pred             --------CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC-CEEecC---CCCCeEEEEEecCC
Q psy10669        193 --------SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG-YHVVTG---GTDVHLILIDLRKN  260 (337)
Q Consensus       193 --------~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G-~~v~~~---~t~~h~v~V~~~~~  260 (337)
                              +-.||++.+.++++..+++.+.+...+...++..++++++.+.|.+.+ +.+.+.   ...+.++.+.+  .
T Consensus       240 ~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~--~  317 (371)
T PF00266_consen  240 GLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIEVLGPDDEPRRPSIVSFNL--P  317 (371)
T ss_dssp             CHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGGBGTTEEEEEE--T
T ss_pred             ccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeEeeecccccccceEEEee--c
Confidence                    125799999999999999998666667889999999999999999954 455431   23455666666  5


Q ss_pred             CcchHHHHHHHhhcCceecc
Q psy10669        261 KLTGSKVELVLEEIAIACNK  280 (337)
Q Consensus       261 ~~~~~~~~~~L~~~gI~v~~  280 (337)
                      +.++.++.+.|++.||.+..
T Consensus       318 ~~~~~~~~~~L~~~~I~~~~  337 (371)
T PF00266_consen  318 GSDADDVVKYLEERGIAVST  337 (371)
T ss_dssp             TSSHHHHHHHHHHHTEEEEE
T ss_pred             CCCHHHHHHHHhhcCEEEec
Confidence            66789999999988999876

On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....

>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA

Probab=99.64  E-value=9.5e-14  Score=136.29  Aligned_cols=238  Identities=16%  Similarity=0.126  Sum_probs=164.9

Q ss_pred             eeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHH
Q psy10669         35 LIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVC  113 (337)
Q Consensus        35 l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~  113 (337)
                      ..++-..+|+.|++++...+...  .+++++..+.+.....+....+|+.+++++|++++   -+|.+++| |.++..++
T Consensus        21 d~a~~~~~p~~v~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~---~~i~~t~g~t~~l~~~~   95 (398)
T TIGR03392        21 DSAATALKPQAVIDATQQFYRLS--SGTVHRSQHQQAQSLTARYELARQQVARFLNAPDA---ENIVWTRGTTESINLVA   95 (398)
T ss_pred             eCccccCCCHHHHHHHHHHHHhc--CCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCC---CeEEEeCChHHHHHHHH
Confidence            34555677999999998765433  25665554544444545555678899999999632   25777777 67766666


Q ss_pred             Hhh----CCc---------------------------------------------ccc---cccEEEEcCcc--cccccC
Q psy10669        114 EKA----LPT---------------------------------------------NNA---RFDFLSSGTTC--YSRCLD  139 (337)
Q Consensus       114 ~aL----l~~---------------------------------------------~~a---~pklII~~~S~--~~~~~d  139 (337)
                      .++    +++                                             +.+   ++++|++...+  .+...|
T Consensus        96 ~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~i~~~t~lv~i~~~~n~tG~~~~  175 (398)
T TIGR03392        96 QSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGADLLPDIRQLPELLTPRTRILALGQMSNVTGGCPD  175 (398)
T ss_pred             HHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHHhccCceEEEEECccccccccCC
Confidence            776    232                                             001   26888776333  358899


Q ss_pred             hHHHHHHhhhcCCeEEEeccccccccc------e---eeee-cc----CC-chhhh--hHHHHHhhcc------------
Q psy10669        140 YARFRQICDETDSIMFADMSHISGLIA------G---VKGV-TK----TG-EKILY--DYEEKINNAV------------  190 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~~Gli~------g---~~~T-~~----~G-g~i~~--~l~~~i~~~~------------  190 (337)
                      +++|.++|+++|+++++|++|..|.+.      +   ++++ +|    .| |++..  ++.+.+.+..            
T Consensus       176 ~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~d~~~~s~~K~~gp~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (398)
T TIGR03392       176 LARAITLAHQYGAVVVVDGAQGVVHGPPDVQALDIDFYAFSGHKLYGPTGIGVLYGKTELLEAMPPWQGGGKMLSHVSFD  255 (398)
T ss_pred             HHHHHHHHHHcCCEEEEEhhhhcCCCCCChhhcCCCEEEEecccccCCCceEEEEEcHHHHhhCCCeecCCceEeecccc
Confidence            999999999999999999999988765      1   2223 22    34 55543  4444443211            


Q ss_pred             ------CC--CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCCC
Q psy10669        191 ------FP--SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKNK  261 (337)
Q Consensus       191 ------~p--~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~~  261 (337)
                            .|  .-.||++.+.++++..++..+.+..+++.+++..++++++.+.|.+. |+++... ..++++.+.+.  +
T Consensus       256 ~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l~~~l~~~l~~l~g~~~~~~-~~~~i~~~~~~--~  332 (398)
T TIGR03392       256 GFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLADLAEERLAQLPGFRSFRC-PGSSLLAFDFA--G  332 (398)
T ss_pred             ccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCC-CCCcEEEEEeC--C
Confidence                  11  12589999999999999998866566778889999999999999884 8888742 34566665543  5


Q ss_pred             cchHHHHHHHhhcCceecc
Q psy10669        262 LTGSKVELVLEEIAIACNK  280 (337)
Q Consensus       262 ~~~~~~~~~L~~~gI~v~~  280 (337)
                      .++.++.+.|.+.||.+..
T Consensus       333 ~~~~~l~~~L~~~gI~v~~  351 (398)
T TIGR03392       333 VHHSDLAALLAESGIALRA  351 (398)
T ss_pred             cCHHHHHHHHHhCCEEEec
Confidence            5678889999999999874

Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.

>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional

Probab=99.62  E-value=9.4e-14  Score=136.24  Aligned_cols=233  Identities=12%  Similarity=0.077  Sum_probs=147.3

Q ss_pred             ceeeecc--CCCCCHHHHHHHhhhhhhccCCCCCCC---cCcCccc-hHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC
Q psy10669         32 GIELIAS--ENFTSLAVLECLGSCLQNKYSEGLPGK---RYYGGNQ-FIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG  105 (337)
Q Consensus        32 ~i~l~as--en~~~p~V~~a~~~~l~~~y~~g~~g~---r~~~G~~-~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg  105 (337)
                      .|||=+-  --.+++.+++|+.... ..|  ++|.+   +.-.++. .++++    ++.++++||+++     .+..+|+
T Consensus        20 ~~~~~~~~~~~p~~~~~~~a~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~l----~~~lA~~~g~~~-----~~~~~g~   87 (387)
T PRK09331         20 FINLDPIQRGGILTPEARKALIEYG-DGY--SVCDYCPGRLDQIKKPPIADF----HEDLAEFLGMDE-----ARVTHGA   87 (387)
T ss_pred             ccccChhhcCCCCCHHHHHHHHHHH-hcc--CCCcccccccccccChHHHHH----HHHHHHHhCCCc-----EEEeCCH
Confidence            4444332  2455899999997653 222  33322   2222332 23444    478899999975     3444555


Q ss_pred             chhHHHHHHhhCCc-----------------------------c----------------cc--------cccEEEEcCc
Q psy10669        106 SPANFAVCEKALPT-----------------------------N----------------NA--------RFDFLSSGTT  132 (337)
Q Consensus       106 t~AN~~v~~aLl~~-----------------------------~----------------~a--------~pklII~~~S  132 (337)
                      +.+|.+++.+++++                             .                +.        ++++|+++..
T Consensus        88 t~a~~~al~~l~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~  167 (387)
T PRK09331         88 REGKFAVMHSLCKKGDYVVLDGLAHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHV  167 (387)
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECC
Confidence            88999999998654                             0                00        2577777632


Q ss_pred             --ccccccChHHHHHHhhhcCCeEEEeccccccccc---------eeeeeccC-------Cchhhh--hHHHHHhhccCC
Q psy10669        133 --CYSRCLDYARFRQICDETDSIMFADMSHISGLIA---------GVKGVTKT-------GEKILY--DYEEKINNAVFP  192 (337)
Q Consensus       133 --~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T~~~-------Gg~i~~--~l~~~i~~~~~p  192 (337)
                        ..+...|+++|.++|+++|++++||+||+.|.++         .++++.+|       +|++..  ++.+.+.....+
T Consensus       168 ~~~tG~~~~l~~I~~la~~~g~~livD~a~~~g~~~~~~~~~g~D~~~~s~~K~l~~~~~~G~l~~~~~~i~~~~~~~~~  247 (387)
T PRK09331        168 DGNYGNLADAKKVAKVAHEYGIPFLLNGAYTVGRMPVDGKKLGADFIVGSGHKSMAASAPSGVLATTEEYADKVFRTSRK  247 (387)
T ss_pred             CCCCcccccHHHHHHHHHHcCCEEEEECCcccCCcCCCHHHcCCCEEEeeCcccccCCCCEEEEEECHHHHhhcccccCC
Confidence              2567888999999999999999999999999765         13333322       366654  455544332211


Q ss_pred             C-------CCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecC-CCCCeEEEEEec-----
Q psy10669        193 S-------LQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTG-GTDVHLILIDLR-----  258 (337)
Q Consensus       193 ~-------~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~-~t~~h~v~V~~~-----  258 (337)
                      +       ..++..+..++++..++.++.+ . .+..++.+++++++++.|.+. |++++.. .+.++++.++..     
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~aal~~~~~-~-~~~~~~~~~~~~~l~~~L~~l~g~~~~~~~~~~~~i~~~~~~~~~~~  325 (387)
T PRK09331        248 FGVKEVELLGCTLRGAPLVTLMASFPHVVE-R-VKRWDEEVKKARWFVDELEKIEGFKQLGEKPRNHDLMKFETPSFDEI  325 (387)
T ss_pred             CcccceeeeceecCchHHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHHHhcCCCEEEeccCcCcCCeEEEeCCchhHH
Confidence            1       1234444455555566666542 2 345566789999999999998 9999852 245666666643     


Q ss_pred             --CCCcchHHHHHHHhhcCcee
Q psy10669        259 --KNKLTGSKVELVLEEIAIAC  278 (337)
Q Consensus       259 --~~~~~~~~~~~~L~~~gI~v  278 (337)
                        ..+.++.++.+.|.++||.+
T Consensus       326 ~~~~~~~~~~~~~~L~~~gI~~  347 (387)
T PRK09331        326 AKKHKRRGFFLYEELKKRGIHG  347 (387)
T ss_pred             hhhccccchhHHHHHHHcCceE
Confidence              12235577899999899984

>TIGR03235 DNA_S_dndA cysteine desulfurase DndA

Probab=99.62  E-value=2.7e-14  Score=137.86  Aligned_cols=236  Identities=14%  Similarity=0.141  Sum_probs=161.4

Q ss_pred             ccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHh
Q psy10669         37 ASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEK  115 (337)
Q Consensus        37 asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~a  115 (337)
                      ++...+++.|++++...+.+.+  ++|+++.+.-.....++...+++++++++|++..    +|.+++| +.+|..++.+
T Consensus         5 a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~----~v~~~~g~t~a~~~~l~~   78 (353)
T TIGR03235         5 NATTPIDPAVAEAMLPWLLEEF--GNPSSRTHEFGHNAKKAVERARKQVAEALGADTE----EVIFTSGATESNNLAILG   78 (353)
T ss_pred             CCCCCCCHHHHHHHHHHHHhcC--CCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCC----eEEEeCCHHHHHHHHHHH
Confidence            4556789999999987665433  6777765542323334444577899999999762    6888887 6787766676


Q ss_pred             hCC-------c-------------------------------------------ccc--cccEEEEcCcc--cccccChH
Q psy10669        116 ALP-------T-------------------------------------------NNA--RFDFLSSGTTC--YSRCLDYA  141 (337)
Q Consensus       116 Ll~-------~-------------------------------------------~~a--~pklII~~~S~--~~~~~d~~  141 (337)
                      +..       +                                           +..  ++++|++....  .++..|++
T Consensus        79 l~~~~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~~~  158 (353)
T TIGR03235        79 LARAGEQKGKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVDESGRIDVDELADAIRPDTLLVSIMHVNNETGSIQPIR  158 (353)
T ss_pred             HHHhcccCCCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhCCCCCEEEEEEcccCCceeccCHH
Confidence            631       1                                           101  26778776322  46888999


Q ss_pred             HHHHHhhhcCCeEEEeccccccccc---------eeeee-cc----CC-chhh-h-hHHH--HHhhccCC------CCCC
Q psy10669        142 RFRQICDETDSIMFADMSHISGLIA---------GVKGV-TK----TG-EKIL-Y-DYEE--KINNAVFP------SLQG  196 (337)
Q Consensus       142 ~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T-~~----~G-g~i~-~-~l~~--~i~~~~~p------~~~g  196 (337)
                      +|.++|+++|++++||++|+.|.+.         .+.++ +|    .| |++. . +...  .+.+..+.      ...|
T Consensus       159 ~I~~l~~~~~~~~ivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~gp~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g  238 (353)
T TIGR03235       159 EIAEVLEAHEAFFHVDAAQVVGKITVDLSADRIDLISCSGHKIYGPKGIGALVIRKRGKPKAPLKPIMFGGGQERGLRPG  238 (353)
T ss_pred             HHHHHHHHcCCEEEEEchhhcCCccccccccCCCEEEeehhhcCCCCceEEEEEccCcccccccCceeeCCCCcCccccC
Confidence            9999999999999999999999887         12233 32    33 4443 2 2211  22322221      2257


Q ss_pred             CCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCc
Q psy10669        197 GPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAI  276 (337)
Q Consensus       197 ~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI  276 (337)
                      +++++.++++..++..+. ...++.+++..+++++|.+.|.+.|+++++.....+-.++.+...+.++.++...|++ ||
T Consensus       239 t~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~l~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~v~~~L~~-~i  316 (353)
T TIGR03235       239 TLPVHLIVGMGEAAEIAR-RNAQAWEVKLRAMRNQLRDALQTLGVKLNGDPAETIPHILNFSIDGVNSEALIVNLRA-DA  316 (353)
T ss_pred             CCChHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHhccCCeEEeCCcccccCCEEEEEeCCcCHHHHHHHHhC-Ce
Confidence            999999999999998875 4557888999999999999999999999863222222234444456788899999976 77


Q ss_pred             eecc
Q psy10669        277 ACNK  280 (337)
Q Consensus       277 ~v~~  280 (337)
                      .+..
T Consensus       317 ~v~~  320 (353)
T TIGR03235       317 AVST  320 (353)
T ss_pred             EEEc
Confidence            7764

This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.

>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated

Probab=99.62  E-value=1.5e-13  Score=135.32  Aligned_cols=239  Identities=10%  Similarity=0.010  Sum_probs=161.4

Q ss_pred             eeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHH
Q psy10669         35 LIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVC  113 (337)
Q Consensus        35 l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~  113 (337)
                      -.|+-..+++.|++++...+...|  +++.++.+.......+....+|+.+++++|++++   -+|.+++| |.++..++
T Consensus        28 d~a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~---~~v~~t~g~t~~l~~~~  102 (406)
T PRK09295         28 DSAASAQKPSQVIDAEAEFYRHGY--AAVHRGIHTLSAQATEKMENVRKQAALFINARSA---EELVFVRGTTEGINLVA  102 (406)
T ss_pred             eCcccccCCHHHHHHHHHHHHhcC--CCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCC---CeEEEeCCHHHHHHHHH
Confidence            456666789999999987654332  4554434433333333334577899999998432   25888888 57766666


Q ss_pred             Hhh----CCc-------------------------------------------cc--c---cccEEEEcCcc--cccccC
Q psy10669        114 EKA----LPT-------------------------------------------NN--A---RFDFLSSGTTC--YSRCLD  139 (337)
Q Consensus       114 ~aL----l~~-------------------------------------------~~--a---~pklII~~~S~--~~~~~d  139 (337)
                      .++    +++                                           .+  +   ++++|++.+-+  .+...|
T Consensus       103 ~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~t~lv~l~~~~n~tG~~~~  182 (406)
T PRK09295        103 NSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPALFDERTRLLAITHVSNVLGTENP  182 (406)
T ss_pred             HHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCCCHHHHHHhcCCCcEEEEEecchhcccccCC
Confidence            653    332                                           01  1   26888877333  468999


Q ss_pred             hHHHHHHhhhcCCeEEEeccccccccc---------eeeee-c----cCC-chhhh--hHHHHHhhcc------------
Q psy10669        140 YARFRQICDETDSIMFADMSHISGLIA---------GVKGV-T----KTG-EKILY--DYEEKINNAV------------  190 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T-~----~~G-g~i~~--~l~~~i~~~~------------  190 (337)
                      +++|.++|+++|++++||++|..|.+.         .++++ +    |.| |++..  ++.+.+.+..            
T Consensus       183 ~~~i~~~~~~~~~~vivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~gp~G~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~  262 (406)
T PRK09295        183 LAEMIALAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHKLYGPTGIGILYVKEALLQEMPPWEGGGSMIATVSLT  262 (406)
T ss_pred             HHHHHHHHHHcCCEEEEEcccccCccccCchhcCCCEEEeehhhccCCCCcEEEEEchHhHhhCCCcccCCceeeeeecC
Confidence            999999999999999999999999876         12233 2    234 44432  3433332110            


Q ss_pred             ---------CCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCC
Q psy10669        191 ---------FPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKN  260 (337)
Q Consensus       191 ---------~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~  260 (337)
                               +-.-.||++.+.++++..+++++.+...+..+++..++++++.+.|.+. |+++++.....+++.+.+  .
T Consensus       263 ~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~iv~~~~--~  340 (406)
T PRK09295        263 EGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLGVIAFNL--G  340 (406)
T ss_pred             CccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCceEEEEEE--C
Confidence                     0123689999999999999999875566778888999999999999875 788886322244555444  3


Q ss_pred             CcchHHHHHHHhhcCceecc
Q psy10669        261 KLTGSKVELVLEEIAIACNK  280 (337)
Q Consensus       261 ~~~~~~~~~~L~~~gI~v~~  280 (337)
                      +.++.++.+.|++.||.+..
T Consensus       341 ~~~~~~~~~~L~~~gI~v~~  360 (406)
T PRK09295        341 KHHAYDVGSFLDNYGIAVRT  360 (406)
T ss_pred             CcCHHHHHHHHHhCCeEEec
Confidence            45778888999999998864

>TIGR01979 sufS cysteine desulfurases, SufS subfamily

Probab=99.62  E-value=2.2e-13  Score=133.74  Aligned_cols=240  Identities=10%  Similarity=0.048  Sum_probs=161.6

Q ss_pred             eeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHH
Q psy10669         34 ELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAV  112 (337)
Q Consensus        34 ~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v  112 (337)
                      -..++-..+|+.|.+++...+...|  +++.++.+.-.....+....+++.+++++|++++   .+|.+++| +.++..+
T Consensus        22 ld~~~~~~~p~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~---~~v~~~~g~t~~l~~~   96 (403)
T TIGR01979        22 LDSAATSQKPQQVIDAVAEYYRNSN--ANVHRGIHTLSVRATEAYEAVREKVAKFINAASD---EEIVFTRGTTESINLV   96 (403)
T ss_pred             EeCccccCCCHHHHHHHHHHHHhCC--CCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCC---CeEEEeCCHHHHHHHH
Confidence            3556667789999999976655543  4444333221222223334567899999999843   25778777 5665555


Q ss_pred             HHhh----CCc-------------------------------------------cc----c-cccEEEEcCcc--ccccc
Q psy10669        113 CEKA----LPT-------------------------------------------NN----A-RFDFLSSGTTC--YSRCL  138 (337)
Q Consensus       113 ~~aL----l~~-------------------------------------------~~----a-~pklII~~~S~--~~~~~  138 (337)
                      +.++    +++                                           .+    . +|++|++....  .+...
T Consensus        97 ~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~~~~lv~~~~~~~~tG~~~  176 (403)
T TIGR01979        97 AYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLDDDGTLDLDDLEKLLTEKTKLVAITHVSNVLGTVN  176 (403)
T ss_pred             HHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecCCCCCCCHHHHHHHhccCCeEEEEEcccccccccC
Confidence            5553    222                                           00    0 27888877433  36889


Q ss_pred             ChHHHHHHhhhcCCeEEEeccccccccc---------eeeee-cc----CC-chhhh--hHHHHHhhccC----------
Q psy10669        139 DYARFRQICDETDSIMFADMSHISGLIA---------GVKGV-TK----TG-EKILY--DYEEKINNAVF----------  191 (337)
Q Consensus       139 d~~~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T-~~----~G-g~i~~--~l~~~i~~~~~----------  191 (337)
                      |+++|.++|+++|+++++|++|+.|.+.         .++++ +|    .| |++..  ++.+.+.+...          
T Consensus       177 ~~~~i~~~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~G~g~l~~~~~~~~~~~~~~~g~~~~~~~~~  256 (403)
T TIGR01979       177 PVEEIAKLAHQVGAKVLVDGAQAVPHMPVDVQALDCDFYVFSGHKMYGPTGIGVLYGKEELLEQMPPFLGGGEMIAEVSF  256 (403)
T ss_pred             CHHHHHHHHHHcCCEEEEEchhhcCccccCccccCCCEEEEecccccCCCCceEEEEchHHHhcCCCeecCCCceeeccc
Confidence            9999999999999999999999998765         12233 22    34 55543  44444332110          


Q ss_pred             ----------CCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCC---CCeEEEEEe
Q psy10669        192 ----------PSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGT---DVHLILIDL  257 (337)
Q Consensus       192 ----------p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t---~~h~v~V~~  257 (337)
                                ..-.|+++...++++..+++.+.+...+..++++.+++++|.+.|.+. |+++++...   .++++.+.+
T Consensus       257 ~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~~~~~~v~~~~  336 (403)
T TIGR01979       257 EETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAYALERLGEIPGLRIYGPRDAEDRGGIISFNV  336 (403)
T ss_pred             CccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccccCceEEEEe
Confidence                      012478999999999999988765456788899999999999999875 899886321   256776766


Q ss_pred             cCCCcchHHHHHHHhhcCceecc
Q psy10669        258 RKNKLTGSKVELVLEEIAIACNK  280 (337)
Q Consensus       258 ~~~~~~~~~~~~~L~~~gI~v~~  280 (337)
                      .  +.++.++.+.|++.||.++.
T Consensus       337 ~--~~~~~~~~~~L~~~gI~v~~  357 (403)
T TIGR01979       337 E--GVHPHDVGTILDEEGIAVRS  357 (403)
T ss_pred             C--CcCHHHHHHHHhhCCEEEcc
Confidence            4  34677888999999999874

This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.

>TIGR00858 bioF 8-amino-7-oxononanoate synthase

Probab=99.62  E-value=1.4e-13  Score=132.20  Aligned_cols=234  Identities=13%  Similarity=0.144  Sum_probs=161.4

Q ss_pred             ccceeeeccCCCC----CHHHHHHHhhhhhhccCCCCCCCcCcCcc-chHHHHHHHHHHHHHhhcCCCCCCCcceeecCC
Q psy10669         30 INGIELIASENFT----SLAVLECLGSCLQNKYSEGLPGKRYYGGN-QFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYS  104 (337)
Q Consensus        30 ~~~i~l~asen~~----~p~V~~a~~~~l~~~y~~g~~g~r~~~G~-~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~S  104 (337)
                      .+.+.-+.++|++    +|.+++++...+ .+|+.++++.+...|. ...++++    +.++++++.+.     ++.+++
T Consensus        15 g~~~id~~~~~~~g~~~~~~v~~a~~~~~-~~~~~~~~~~~~~~g~~~~~~~l~----~~la~~~~~~~-----~i~~~~   84 (360)
T TIGR00858        15 GRRLLNFSSNDYLGLASHPEVIQAAQQGA-EQYGAGSTASRLVSGNSPLHEELE----EELAEWKGTEA-----ALLFSS   84 (360)
T ss_pred             CceEEecccCCcccCCCCHHHHHHHHHHH-HhcCCCCCCcCcccCCcHHHHHHH----HHHHHHhCCCC-----EEEECc
Confidence            3344445556753    589999998764 5677776666665665 3334555    67889998654     699999


Q ss_pred             CchhHHHHHHhhCCc-------------------------------------ccc------cccEEEEcCcccc---ccc
Q psy10669        105 GSPANFAVCEKALPT-------------------------------------NNA------RFDFLSSGTTCYS---RCL  138 (337)
Q Consensus       105 gt~AN~~v~~aLl~~-------------------------------------~~a------~pklII~~~S~~~---~~~  138 (337)
                      |+.+++.++.+++++                                     +..      ++++|+++ +.+.   ...
T Consensus        85 G~~~~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~~~~~v~~~-~~~~~~G~~~  163 (360)
T TIGR00858        85 GYLANVGVISALVGKGDLILSDALNHASLIDGCRLSGARVRRYRHNDVEHLERLLEKNRGERRKLIVTD-GVFSMDGDIA  163 (360)
T ss_pred             hHHHHHHHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEecCCCHHHHHHHHHHcccCCCeEEEEe-CCccCCCCCc
Confidence            999888877888654                                     000      13566655 4544   356


Q ss_pred             ChHHHHHHhhhcCCeEEEeccccccccce------------------eeeecc-----CCchhhh--hHHHHHhhccCCC
Q psy10669        139 DYARFRQICDETDSIMFADMSHISGLIAG------------------VKGVTK-----TGEKILY--DYEEKINNAVFPS  193 (337)
Q Consensus       139 d~~~l~eia~~~ga~l~vD~AH~~Gli~g------------------~~~T~~-----~Gg~i~~--~l~~~i~~~~~p~  193 (337)
                      |+++|.++|+++|+++++|++|..|.++.                  +.+|.+     .||+++.  ++.+.+.....+.
T Consensus       164 ~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~gG~~~~~~~~~~~~~~~~~~~  243 (360)
T TIGR00858       164 PLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGSYGAYVAGSQALIDYLINRARTL  243 (360)
T ss_pred             CHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhhccCcEEEcCHHHHHHHHHhCccc
Confidence            89999999999999999999998776531                  123332     3777765  5666665444443


Q ss_pred             C-CCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHh
Q psy10669        194 L-QGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLE  272 (337)
Q Consensus       194 ~-~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~  272 (337)
                      . .+++++..+++...++....  ..++.++++.++.++|.+.|.+.|+++..  ..+.++++.+.. +.+..++.+.|.
T Consensus       244 ~~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~l~  318 (360)
T TIGR00858       244 IFSTALPPAVAAAALAALELIQ--EEPWRREKLLALIARLRAGLEALGFTLMP--SCTPIVPVIIGD-NASALALAEELQ  318 (360)
T ss_pred             eecCCCCHHHHHHHHHHHHHHh--hCHHHHHHHHHHHHHHHHHHHHcCCccCC--CCCCEEEEEeCC-HHHHHHHHHHHH
Confidence            3 34455666667667775542  34677899999999999999999888764  445677777753 235678888888


Q ss_pred             hcCceec
Q psy10669        273 EIAIACN  279 (337)
Q Consensus       273 ~~gI~v~  279 (337)
                      +.||.+.
T Consensus       319 ~~gI~v~  325 (360)
T TIGR00858       319 QQGIFVG  325 (360)
T ss_pred             HCCeeEe
Confidence            8899996

This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.

>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family

Probab=99.61  E-value=1.9e-13  Score=131.73  Aligned_cols=242  Identities=14%  Similarity=0.093  Sum_probs=164.1

Q ss_pred             eeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHH
Q psy10669         33 IELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV  112 (337)
Q Consensus        33 i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v  112 (337)
                      ++++|+..-+++.|.+++...+.     +   .++ .   ...++...+++.++++||++.++  ..+...||+.|+..+
T Consensus         1 ~~~~~~~~~~~~~v~~a~~~~~~-----~---~~~-~---~~~~~~~~~~~~la~~~g~~~~~--~~~~~~~~t~al~~~   66 (356)
T cd06451           1 LLLIPGPSNVPPRVLKAMNRPML-----G---HRS-P---EFLALMDEILEGLRYVFQTENGL--TFLLSGSGTGAMEAA   66 (356)
T ss_pred             CcccCCCcCCCHHHHHHhCCCcc-----C---CCC-H---HHHHHHHHHHHHHHHHhcCCCCC--EEEEecCcHHHHHHH
Confidence            57899999999999999964321     1   121 1   12233334457889999995421  124455668999888


Q ss_pred             HHhhCCc-------------------------------------------cc---c-cccEEEEcCcc--cccccChHHH
Q psy10669        113 CEKALPT-------------------------------------------NN---A-RFDFLSSGTTC--YSRCLDYARF  143 (337)
Q Consensus       113 ~~aLl~~-------------------------------------------~~---a-~pklII~~~S~--~~~~~d~~~l  143 (337)
                      +.+++++                                           +.   . +|++|++....  .+...|+++|
T Consensus        67 ~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~~~~i  146 (356)
T cd06451          67 LSNLLEPGDKVLVGVNGVFGDRWADMAERYGADVDVVEKPWGEAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNPLEGI  146 (356)
T ss_pred             HHHhCCCCCEEEEecCCchhHHHHHHHHHhCCCeEEeecCCCCCCCHHHHHHHHhccCCCEEEEeccCCCcccccCHHHH
Confidence            8888654                                           00   1 36788775333  5788999999


Q ss_pred             HHHhhhcCCeEEEeccccccccc------e----eeeecc-----CC-chhhh--hHHHHHhh--ccCC-----------
Q psy10669        144 RQICDETDSIMFADMSHISGLIA------G----VKGVTK-----TG-EKILY--DYEEKINN--AVFP-----------  192 (337)
Q Consensus       144 ~eia~~~ga~l~vD~AH~~Gli~------g----~~~T~~-----~G-g~i~~--~l~~~i~~--~~~p-----------  192 (337)
                      .++|+++|+++++|++|..|...      +    +.+.+|     .| |++..  ++.+.+..  ...+           
T Consensus       147 ~~~a~~~~~~li~D~~~~~g~~~~~~~~~~~d~~~~s~~K~l~~p~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (356)
T cd06451         147 GALAKKHDALLIVDAVSSLGGEPFRMDEWGVDVAYTGSQKALGAPPGLGPIAFSERALERIKKKTKPKGFYFDLLLLLKY  226 (356)
T ss_pred             HHHHHhcCCEEEEeeehhccCccccccccCccEEEecCchhccCCCCcceeEECHHHHHHHHhcCCCCceeecHHHHHhh
Confidence            99999999999999999988654      1    122232     23 66543  45454432  1111           


Q ss_pred             -----CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecC-CCCCe-EEEEEecCCCcchH
Q psy10669        193 -----SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTG-GTDVH-LILIDLRKNKLTGS  265 (337)
Q Consensus       193 -----~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~-~t~~h-~v~V~~~~~~~~~~  265 (337)
                           +..++++++.++++..++..+.....++..++..++++++.+.|.+.|+++.+. ...++ +.++.+. .+.+..
T Consensus       227 ~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~  305 (356)
T cd06451         227 WGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEALGLKLLAKPELRSPTVTAVLVP-EGVDGD  305 (356)
T ss_pred             hcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCcccCCCceEEEECC-CCCCHH
Confidence                 345678899999999999887765567889999999999999999999998752 11123 3344443 345778


Q ss_pred             HHHHHHhhc-CceeccC------cccchhhh
Q psy10669        266 KVELVLEEI-AIACNKN------TGISLAAE  289 (337)
Q Consensus       266 ~~~~~L~~~-gI~v~~~------~girig~~  289 (337)
                      .+.+.|.+. ||.+..-      ..||++..
T Consensus       306 ~~~~~L~~~~gI~~~~g~~~~~~~~iRis~~  336 (356)
T cd06451         306 EVVRRLMKRYNIEIAGGLGPTAGKVFRIGHM  336 (356)
T ss_pred             HHHHHHHHhCCEEEecccccccCCEEEEecC
Confidence            888999886 9998642      16787653

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.

>cd00617 Tnase_like Tryptophanase family (Tnase)

Probab=99.61  E-value=1.3e-13  Score=137.03  Aligned_cols=252  Identities=15%  Similarity=0.188  Sum_probs=169.2

Q ss_pred             hcccceeeeccCCC----CCH----HHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcce
Q psy10669         28 RQINGIELIASENF----TSL----AVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCN   99 (337)
Q Consensus        28 rq~~~i~l~asen~----~~p----~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~   99 (337)
                      .+....-++.++..    +++    .+.+++...+..       |.-.|++.....++|    +.++++||.++     .
T Consensus         8 ~~g~n~~~l~~~~v~iDlltds~t~ams~~~~~a~~~-------gd~~Y~~~~g~~~Le----eaia~~~g~~~-----v   71 (431)
T cd00617           8 EAGYNVFLLRSEDVYIDLLTDSGTGAMSDYQWAAMML-------GDEAYAGSKSFYDLE----DAVQDLFGFKH-----I   71 (431)
T ss_pred             HcCCCEEeCCCCCcCCCCCCCCCcHHHHHHHHHHHHh-------CCCccCCCCCHHHHH----HHHHHHHCCCe-----E
Confidence            34445556667766    233    343443433321       112255555567887    57789999986     5


Q ss_pred             eecCCCchhHHHHHHhhCCc-----------------------------c--------------c-------c---c---
Q psy10669        100 VQPYSGSPANFAVCEKALPT-----------------------------N--------------N-------A---R---  123 (337)
Q Consensus       100 v~~~Sgt~AN~~v~~aLl~~-----------------------------~--------------~-------a---~---  123 (337)
                      +..+||+.|+..++.+++++                             .              +       +   +   
T Consensus        72 v~t~~Gt~Al~la~~al~~pGD~V~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~  151 (431)
T cd00617          72 IPTHQGRGAENILFSILLKPGRTVPSNMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAE  151 (431)
T ss_pred             EEcCCHHHHHHHHHHHhCCCCCEEccCCcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccCC
Confidence            77788899999889998764                             0              0       0   1   


Q ss_pred             -ccEEEEcCccc---ccccCh---HHHHHHhhhcCCeEEEecccccc---cc--------c---------------eeee
Q psy10669        124 -FDFLSSGTTCY---SRCLDY---ARFRQICDETDSIMFADMSHISG---LI--------A---------------GVKG  170 (337)
Q Consensus       124 -pklII~~~S~~---~~~~d~---~~l~eia~~~ga~l~vD~AH~~G---li--------~---------------g~~~  170 (337)
                       +++|+++-+++   +.+.+.   +++.++|+++|++|+.|+||.++   ++        .               ..+.
T Consensus       152 ~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s~sd~~~m  231 (431)
T cd00617         152 NIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAEIAREMFSYADGCTM  231 (431)
T ss_pred             CccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHHHHHHhhccCCEEEE
Confidence             35666653333   456644   46679999999999999999875   21        1               1233


Q ss_pred             eccC------Cchhhh---hHHHHHhhcc--CCCC--CCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHH
Q psy10669        171 VTKT------GEKILY---DYEEKINNAV--FPSL--QGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMI  237 (337)
Q Consensus       171 T~~~------Gg~i~~---~l~~~i~~~~--~p~~--~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~  237 (337)
                      +++|      ||++++   ++.++++...  +++.  +|+.+...++++++++.+..+   .+|.++.+++.++|.+.|.
T Consensus       232 S~~K~~~~~~GG~i~~~d~~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~~---~~~l~~~~~~r~~l~~~L~  308 (431)
T cd00617         232 SAKKDGLVNIGGFLALRDDELYEEARQRVVLYEGFVTYGGMAGRDMEALAQGLREAVE---EDYLRHRVEQVRYLGDRLD  308 (431)
T ss_pred             EeecCCCCccceEEEeCcHHHHHHHHHhccccCCccccccccHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHH
Confidence            4444      888886   3777776432  2332  577888888999889887533   3677777888899999999


Q ss_pred             hCCCEEecCCCCCeEEEEEecCC-------CcchHHHH-HHHhhcCceeccCc-------------------ccchhhhh
Q psy10669        238 KRGYHVVTGGTDVHLILIDLRKN-------KLTGSKVE-LVLEEIAIACNKNT-------------------GISLAAEI  290 (337)
Q Consensus       238 ~~G~~v~~~~t~~h~v~V~~~~~-------~~~~~~~~-~~L~~~gI~v~~~~-------------------girig~~~  290 (337)
                      +.|+.+.. ...+|.+++|+...       ++++..+. .++++.||.+....                   ++||++| 
T Consensus       309 ~~G~~v~~-P~Ggh~v~~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~p-  386 (431)
T cd00617         309 EAGVPIVE-PAGGHAVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIP-  386 (431)
T ss_pred             HCCCCccC-CCcceEEEEEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEecc-
Confidence            99999885 36789999998752       22455555 66667899964311                   8999998 


Q ss_pred             HhhhCCCHHHHH
Q psy10669        291 QAISGPKLVDFQ  302 (337)
Q Consensus       291 ~t~~G~~~~~~~  302 (337)
                        ||+++...+.
T Consensus       387 --rr~~t~~~~~  396 (431)
T cd00617         387 --RRVYTQDHMD  396 (431)
T ss_pred             --ccccCHHHHH
Confidence              7898866554

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.

>PRK02948 cysteine desulfurase; Provisional

Probab=99.60  E-value=8.6e-14  Score=135.73  Aligned_cols=234  Identities=13%  Similarity=0.089  Sum_probs=158.2

Q ss_pred             ccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHh
Q psy10669         37 ASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEK  115 (337)
Q Consensus        37 asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~a  115 (337)
                      ++...+++.|++++...+.. + .+++++.+..| .....+...+++.+++++|+++    .+|.+++| +.+|..++.+
T Consensus         7 a~~~~~~~~v~~a~~~~~~~-~-~~~~~~~~~~~-~~~~~~~~~~r~~la~~~g~~~----~~i~~~~g~t~a~~~~~~~   79 (381)
T PRK02948          7 AATTPMSKEALQTYQKAASQ-Y-FGNESSLHDIG-GTASSLLQVCRKTFAEMIGGEE----QGIYFTSGGTESNYLAIQS   79 (381)
T ss_pred             CCCCCCCHHHHHHHHHHHHh-c-CCCCccccHHH-HHHHHHHHHHHHHHHHHhCCCC----CeEEEeCcHHHHHHHHHHH
Confidence            45567799999999765543 2 35555444344 3334455567789999999876    36888777 7888777777


Q ss_pred             hC----Cc------------------------------------------cc--c---cccEEEEcCcc--cccccChHH
Q psy10669        116 AL----PT------------------------------------------NN--A---RFDFLSSGTTC--YSRCLDYAR  142 (337)
Q Consensus       116 Ll----~~------------------------------------------~~--a---~pklII~~~S~--~~~~~d~~~  142 (337)
                      ++    ++                                          .+  +   ++++|++...+  .+...|+++
T Consensus        80 ~~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~~~~  159 (381)
T PRK02948         80 LLNALPQNKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVDKSGLIRLVDLERAITPDTVLASIQHANSEIGTIQPIAE  159 (381)
T ss_pred             HHHhccCCCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeCCCCCCCHHHHHHhcCCCCEEEEEECCcCCcEeehhHHH
Confidence            64    21                                          01  1   25777776333  368889999


Q ss_pred             HHHHhhhcCCeEEEeccccccccc---------eeeeecc-----CC-chhh-h-hHHHHHhhc------cCCCCCCCCc
Q psy10669        143 FRQICDETDSIMFADMSHISGLIA---------GVKGVTK-----TG-EKIL-Y-DYEEKINNA------VFPSLQGGPH  199 (337)
Q Consensus       143 l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T~~-----~G-g~i~-~-~l~~~i~~~------~~p~~~g~~~  199 (337)
                      |.++|+++|++++||++|..|.+.         .+.+|.+     .| |++. . ++  .+.+.      ......++++
T Consensus       160 I~~l~~~~~~~vivD~~~~~g~~~~~~~~~~~d~~~~s~~K~~gp~G~G~l~~~~~~--~~~~~~~~~~~~~~~~~~t~~  237 (381)
T PRK02948        160 IGALLKKYNVLFHSDCVQTFGKLPIDVFEMGIDSLSVSAHKIYGPKGVGAVYINPQV--RWKPVFPGTTHEKGFRPGTVN  237 (381)
T ss_pred             HHHHHHHcCCEEEEEChhhccccccCcccCCCCEEEecHHhcCCCCcEEEEEEcCCC--CCCCcccCCCCCCCcCCCCcc
Confidence            999999999999999999999664         1333432     33 4443 2 22  01111      1122468999


Q ss_pred             HHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEE--EEEecCCCcchHHHHHHHhhcCce
Q psy10669        200 NHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLI--LIDLRKNKLTGSKVELVLEEIAIA  277 (337)
Q Consensus       200 ~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v--~V~~~~~~~~~~~~~~~L~~~gI~  277 (337)
                      .+.++++..++.++. ...++.++++.++.++|.+.|++.|+++...+..+++.  ++.+...++++.++...|++.||.
T Consensus       238 ~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~gI~  316 (381)
T PRK02948        238 VPGIAAFLTAAENIL-KNMQEESLRFKELRSYFLEQIQTLPLPIEVEGHSTSCLPHIIGVTIKGIEGQYTMLECNRRGIA  316 (381)
T ss_pred             HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCCEEEeCCCccCcCCEEEEEeCCCCHHHHHHhcccCCEE
Confidence            999999999998875 35678889999999999999999998766422223222  233333455677777888888999


Q ss_pred             ecc
Q psy10669        278 CNK  280 (337)
Q Consensus       278 v~~  280 (337)
                      +..
T Consensus       317 v~~  319 (381)
T PRK02948        317 IST  319 (381)
T ss_pred             EEc
Confidence            985

>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family

Probab=99.60  E-value=7.6e-14  Score=135.20  Aligned_cols=232  Identities=13%  Similarity=0.033  Sum_probs=154.4

Q ss_pred             HHHHHHHHHhhcccceeeeccCCCC----CHHHHHHHhhhhhhccCCCCCCCcCcCcc-chHHHHHHHHHHHHHhhcCCC
Q psy10669         18 LYSLIKKEKHRQINGIELIASENFT----SLAVLECLGSCLQNKYSEGLPGKRYYGGN-QFIDEIEIVAQQRSLKAFNLD   92 (337)
Q Consensus        18 ~~~~~~~e~~rq~~~i~l~asen~~----~p~V~~a~~~~l~~~y~~g~~g~r~~~G~-~~~~~lE~~~~~~~a~lfg~~   92 (337)
                      -++.|.+...|..+    -+-+||+    +|.++++.... ..+|+          |+ ..+.++|    +.+++++|.+
T Consensus        10 ~~~~~~~~~~~~~~----~~~~~ylgl~~~~~~~~~~~~~-~~~~~----------g~~~~~~~Le----~~lA~~~g~~   70 (346)
T TIGR03576        10 ALEIIREKISRGGR----DSLYDLTGLAGGFKIDEEDLEL-LETYV----------GPAIFEEKVQ----ELGREHLGGP   70 (346)
T ss_pred             HHHHHHHHHhccCC----ccccccccCCCChhHHHHHHHH-HHHhc----------CCHHHHHHHH----HHHHHHcCCC
Confidence            44555543333321    1348999    99999998765 55763          33 4446677    6889999995


Q ss_pred             CCCCcceeecCCCchhHHHHHHhhCCc-----------------------------------ccc---cccEEEEcCccc
Q psy10669         93 PEQWGCNVQPYSGSPANFAVCEKALPT-----------------------------------NNA---RFDFLSSGTTCY  134 (337)
Q Consensus        93 ~~~~~~~v~~~Sgt~AN~~v~~aLl~~-----------------------------------~~a---~pklII~~~S~~  134 (337)
                      .+   ..+.++||+.||.+++.+|+++                                   .+.   ++++||+++  +
T Consensus        71 ~e---~ilv~~gg~~a~~~~~~al~~~gd~Vli~~~d~p~~~s~~~~~~l~ga~~~~~~~l~~l~~~~~~~lIiitg--~  145 (346)
T TIGR03576        71 EE---KILVFNRTSSAILATILALEPPGRKVVHYLPEKPAHPSIPRSCKLAGAEYFESDELSELKKIDGTSLVVITG--S  145 (346)
T ss_pred             cc---eEEEECCHHHHHHHHHHHhCCCCCEEEECCCCCCCchhHHHHHHHcCCEEeccCCHHHHhhCcCceEEEEEC--C
Confidence            43   2467777799999999999653                                   101   267777764  3


Q ss_pred             ccccCh---HH---HHHHhhhcCCeEEEeccccccccc-------------eeeeec------cCCchhhh--hHHHHHh
Q psy10669        135 SRCLDY---AR---FRQICDETDSIMFADMSHISGLIA-------------GVKGVT------KTGEKILY--DYEEKIN  187 (337)
Q Consensus       135 ~~~~d~---~~---l~eia~~~ga~l~vD~AH~~Gli~-------------g~~~T~------~~Gg~i~~--~l~~~i~  187 (337)
                      +|++|+   ++   |.++|+++|++++||+||..|+.+             .+++|+      .+||++++  ++.+.+.
T Consensus       146 s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~~~~~~~~~~~divv~s~SKalaG~r~G~v~~~~~li~~l~  225 (346)
T TIGR03576       146 TMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQPPALDLGADLVVTSTDKLMDGPRGGLLAGRKELVDKIK  225 (346)
T ss_pred             CCCCcccCHHHHHHHHHHHHHcCCEEEEECCccccccccCCCCCHHHcCCcEEEeccchhccccceEEEEeCHHHHHHHH
Confidence            777665   44   556678899999999999987643             123343      34788776  5778787


Q ss_pred             hccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHH
Q psy10669        188 NAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKV  267 (337)
Q Consensus       188 ~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~  267 (337)
                      ....|..++ .+++..++...++... .  .++.++.+.++.+.+.+.+.+  +.+..  +..--+++++...+ +...+
T Consensus       226 ~~~~~~~~s-~~~~~~~aa~~aL~~~-~--~~~~~~~l~~r~~~~~~~l~~--~~~~~--~~~~f~~~~~~~~~-~~~~~  296 (346)
T TIGR03576       226 SVGEQFGLE-AQAPLLAAVVRALEEF-E--LSRIRDAFKRKEEVYLRLFDK--LNVER--TPTGFVIKGVEEEK-LIEIG  296 (346)
T ss_pred             HhhcCcccC-ccHHHHHHHHHHHhhc-c--HHHHHHHHHHHHHHHHHHHHh--CCCCc--CCCeEEEEeCCCCC-HHHHH
Confidence            766776664 5666777777777553 2  246677888888888777773  54443  22225677775422 34677


Q ss_pred             HHHHhhcCceeccCc
Q psy10669        268 ELVLEEIAIACNKNT  282 (337)
Q Consensus       268 ~~~L~~~gI~v~~~~  282 (337)
                      .+.|++.||.+.+..
T Consensus       297 ~~ll~~~gV~v~~~~  311 (346)
T TIGR03576       297 LDLLRNYGIITITAV  311 (346)
T ss_pred             HHHHHhCCEEEeCCc
Confidence            788888999998743

Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.

>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional

Probab=99.60  E-value=3.2e-13  Score=131.76  Aligned_cols=231  Identities=17%  Similarity=0.229  Sum_probs=157.4

Q ss_pred             eeeeccCCC----CCHHHHHHHhhhhhhccCCCCCCCcCcCccchH-HHHHHHHHHHHHhhcCCCCCCCcceeecCCCch
Q psy10669         33 IELIASENF----TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFI-DEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSP  107 (337)
Q Consensus        33 i~l~asen~----~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~-~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~  107 (337)
                      |+| ++.+|    .+|.+.+++...+ .+++.++++.++..|.... ++++    +.+++++|.+.     +|.++||++
T Consensus        45 i~l-~~~~~~~~~~~~~i~~a~~~~~-~~~~~~~~~~~~~~G~~~l~~~l~----~~la~~~g~~~-----~i~~tsG~~  113 (397)
T PRK06939         45 INF-CANNYLGLANHPELIAAAKAAL-DSHGFGMASVRFICGTQDLHKELE----EKLAKFLGTED-----AILYSSCFD  113 (397)
T ss_pred             EEe-eccCccccCCCHHHHHHHHHHH-HHcCCCCcccccccCCcHHHHHHH----HHHHHHhCCCc-----EEEEcChHH
Confidence            554 44565    4899999998764 4555567777778887544 4565    57788999764     699999999


Q ss_pred             hHHHHHHhhCCc----------------------------------------cc---c--cccEEEEcCcccc---cccC
Q psy10669        108 ANFAVCEKALPT----------------------------------------NN---A--RFDFLSSGTTCYS---RCLD  139 (337)
Q Consensus       108 AN~~v~~aLl~~----------------------------------------~~---a--~pklII~~~S~~~---~~~d  139 (337)
                      +|.+++.+++++                                        +.   .  ++++|+++ ++++   ...|
T Consensus       114 a~~~~~~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~-~v~~~~G~~~~  192 (397)
T PRK06939        114 ANGGLFETLLGKEDAIISDALNHASIIDGVRLCKAKRYRYANNDMADLEAQLKEAKEAGARHKLIATD-GVFSMDGDIAP  192 (397)
T ss_pred             HHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHhcCCceEEeCCCCHHHHHHHHHhhhccCCCCeEEEEe-cCcCCCCCcCC
Confidence            999999998764                                        00   1  24566665 3444   4568


Q ss_pred             hHHHHHHhhhcCCeEEEeccccccccc----------e-------eeeec------cCCchhhh--hHHHHHhhccCCCC
Q psy10669        140 YARFRQICDETDSIMFADMSHISGLIA----------G-------VKGVT------KTGEKILY--DYEEKINNAVFPSL  194 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~~Gli~----------g-------~~~T~------~~Gg~i~~--~l~~~i~~~~~p~~  194 (337)
                      +++|.++|+++|++|++|++|..|++.          +       ++++.      ..||+++.  ++.+.+.....|..
T Consensus       193 ~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~g~r~G~v~~~~~~~~~l~~~~~~~~  272 (397)
T PRK06939        193 LPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALGGASGGYTAGRKEVIDWLRQRSRPYL  272 (397)
T ss_pred             HHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhCccCceEEEeCHHHHHHHHHhCcccc
Confidence            889999999999999999999776542          1       12232      24677765  56666665444544


Q ss_pred             CC-CCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhh
Q psy10669        195 QG-GPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEE  273 (337)
Q Consensus       195 ~g-~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~  273 (337)
                      .+ ++.+...+++..++..+.  ..++.++++.++.+++.+.|.+.|+++..  .+..++++.+.. +.+..++.+.|.+
T Consensus       273 ~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~L~~  347 (397)
T PRK06939        273 FSNSLAPAIVAASIKVLELLE--ESDELRDRLWENARYFREGMTAAGFTLGP--GEHPIIPVMLGD-AKLAQEFADRLLE  347 (397)
T ss_pred             ccCCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHcCCCcCC--CCCCEEEEEECC-HHHHHHHHHHHHH
Confidence            43 444444555555565553  35688899999999999999998887754  344555444432 2345667777777


Q ss_pred             cCceecc
Q psy10669        274 IAIACNK  280 (337)
Q Consensus       274 ~gI~v~~  280 (337)
                      .||.+..
T Consensus       348 ~gI~v~~  354 (397)
T PRK06939        348 EGVYVIG  354 (397)
T ss_pred             CCceEee
Confidence            7998863

>PRK05958 8-amino-7-oxononanoate synthase; Reviewed

Probab=99.59  E-value=2.6e-13  Score=131.78  Aligned_cols=235  Identities=14%  Similarity=0.183  Sum_probs=158.8

Q ss_pred             ccceeeeccCC--C-CCHHHHHHHhhhhhhccCCCCCCCcCcCccchH-HHHHHHHHHHHHhhcCCCCCCCcceeecCCC
Q psy10669         30 INGIELIASEN--F-TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFI-DEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG  105 (337)
Q Consensus        30 ~~~i~l~asen--~-~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~-~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg  105 (337)
                      +.-|.+...+|  + .+|.|.+++...+ .+|..++++.+...|.... ++++    +++++++|.+.     .+.+++|
T Consensus        39 ~~~id~~~~~~~g~~~~~~v~~a~~~~~-~~~~~~~~~~~~~~g~~~~~~~l~----~~la~~~~~~~-----~i~~~~g  108 (385)
T PRK05958         39 RRMLNFASNDYLGLARHPRLIAAAQQAA-RRYGAGSGGSRLVTGNSPAHEALE----EELAEWFGAER-----ALLFSSG  108 (385)
T ss_pred             ceEEEeeCCCcccCCCCHHHHHHHHHHH-HhcCCCCCCcCcccCCcHHHHHHH----HHHHHHhCCCc-----EEEECcH
Confidence            34455665554  2 4799999998765 4676666666665565333 4444    57889998643     6888899


Q ss_pred             chhHHHHHHhhCCc-------------------------------------cc--cc---ccEEEEcCcccc---cccCh
Q psy10669        106 SPANFAVCEKALPT-------------------------------------NN--AR---FDFLSSGTTCYS---RCLDY  140 (337)
Q Consensus       106 t~AN~~v~~aLl~~-------------------------------------~~--a~---pklII~~~S~~~---~~~d~  140 (337)
                      +.+|..++.+++++                                     +.  ..   +.+++++ +.++   ...|+
T Consensus       109 ~~~~~~~l~~~~~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~~~~~~~~lvi~~-~~~~~~G~~~~l  187 (385)
T PRK05958        109 YAANLAVLTALAGKGDLIVSDKLNHASLIDGARLSRARVRRYPHNDVDALEALLAKWRAGRALIVTE-SVFSMDGDLAPL  187 (385)
T ss_pred             HHHHHHHHHHhCCCCCEEEEeCccCHHHHHHHHhcCCceEEeCCCCHHHHHHHHHhccCCCeEEEEE-ecccCCCCcCCH
Confidence            99988877887664                                     00  01   2455554 4443   46789


Q ss_pred             HHHHHHhhhcCCeEEEeccccccccc--e----------------eeeec-c----CCchhhh--hHHHHHhhccCCCCC
Q psy10669        141 ARFRQICDETDSIMFADMSHISGLIA--G----------------VKGVT-K----TGEKILY--DYEEKINNAVFPSLQ  195 (337)
Q Consensus       141 ~~l~eia~~~ga~l~vD~AH~~Gli~--g----------------~~~T~-~----~Gg~i~~--~l~~~i~~~~~p~~~  195 (337)
                      ++|.++|+++|+++++|++|..|+++  |                +.+|. |    .||+++.  ++.+.+.....+..+
T Consensus       188 ~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~Gg~~~~~~~~~~~~~~~~~~~~~  267 (385)
T PRK05958        188 AELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALGSSGAAVLGSETLIDYLINRARPFIF  267 (385)
T ss_pred             HHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhcccCCcEEEcCHHHHHHHHHhCcccee
Confidence            99999999999999999999877653  1                12232 2    3677665  466655544344443


Q ss_pred             -CCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhc
Q psy10669        196 -GGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEI  274 (337)
Q Consensus       196 -g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~  274 (337)
                       +++++..++++..++..+..  .++.++++.++.+++.+.|.+.|+++..  ..+.++++.+.. ..+..++.+.|.+.
T Consensus       268 ~~~~~~~~~aa~~aal~~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~l~~~  342 (385)
T PRK05958        268 TTALPPAQAAAARAALRILRR--EPERRERLAALIARLRAGLRALGFQLMD--SQSAIQPLIVGD-NERALALAAALQEQ  342 (385)
T ss_pred             cCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHcCCCcCC--CCCCEEEEEeCC-HHHHHHHHHHHHHC
Confidence             34566666666666666532  2678899999999999999999988765  456677777653 23566788888888


Q ss_pred             Cceecc
Q psy10669        275 AIACNK  280 (337)
Q Consensus       275 gI~v~~  280 (337)
                      ||.+.+
T Consensus       343 gI~v~~  348 (385)
T PRK05958        343 GFWVGA  348 (385)
T ss_pred             CceEec
Confidence            999974

>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []

Probab=99.59  E-value=9.8e-15  Score=143.38  Aligned_cols=201  Identities=19%  Similarity=0.245  Sum_probs=138.6

Q ss_pred             HHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHhhCCc------------------------------------
Q psy10669         77 IEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEKALPT------------------------------------  119 (337)
Q Consensus        77 lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~aLl~~------------------------------------  119 (337)
                      ....++++++++||++.     ....+.| |.+|.+++.+++++                                    
T Consensus        67 ~I~eAe~~aA~~fGAd~-----t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~alil~ga~Pvyi~p~~~~~g  141 (417)
T PF01276_consen   67 IIKEAEELAARAFGADK-----TFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYNALILSGAIPVYIPPEDNEYG  141 (417)
T ss_dssp             HHHHHHHHHHHHHTESE-----EEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHHHHHHHTEEEEEEEEEE-TTS
T ss_pred             HHHHHHHHHHHhcCCCe-----EEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCeEEEecCCccccC
Confidence            44456689999999996     5666788 57899999999876                                    


Q ss_pred             ------c-----------ccc------cc-EEEEcCcccccccChHHHHHHhhhcCCeEEEeccccc--cccc-------
Q psy10669        120 ------N-----------NAR------FD-FLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHIS--GLIA-------  166 (337)
Q Consensus       120 ------~-----------~a~------pk-lII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~--Gli~-------  166 (337)
                            .           +.+      |+ ++|+.++.|+...|+++|.++|+++|.+|+||+||++  ++..       
T Consensus       142 i~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~lp~~a~~  221 (417)
T PF01276_consen  142 IIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTYYGVCYDIKEIAEICHKHGIPLLVDEAHGAHFGFHPLPRSALA  221 (417)
T ss_dssp             -BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-TTSEEE-HHHHHHHHCCTECEEEEE-TT-TTGGCSGGGTTCSS
T ss_pred             CccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCCCeEEECHHHHHHHhcccCCEEEEEccccccccCCCCccchhh
Confidence                  0           011      23 5556688889999999999999999999999999987  1111       


Q ss_pred             ------------eeeeecc------CCchhhh--h--H-HHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHH
Q psy10669        167 ------------GVKGVTK------TGEKILY--D--Y-EEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQA  223 (337)
Q Consensus       167 ------------g~~~T~~------~Gg~i~~--~--l-~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~  223 (337)
                                  .+.||||      +++++..  +  + .++++.+..-..+++|..+.+|++.+|..+|...++++..+
T Consensus       222 ~gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~~v~~~~~~~~l~~~~TTSPSY~lmASlD~a~~~m~~~~G~~l~~  301 (417)
T PF01276_consen  222 LGADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDRIVDHERVNEALSMHQTTSPSYPLMASLDVARAQMEEEEGRELLE  301 (417)
T ss_dssp             TTSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCCCTTHHHHHHHHHHHS-SS--HHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred             ccCccccccceeeeechhhcccccccceEEEecCCCcccHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHhhhhhHHHHH
Confidence                        2457776      3444422  2  2 45667664444578999999999999999984467899999


Q ss_pred             HHHHHHHHHHHHHHh----CCCEEecC-----C-----------------------CCCeEEEEEe---------cCCCc
Q psy10669        224 QVKANASHLSDEMIK----RGYHVVTG-----G-----------------------TDVHLILIDL---------RKNKL  262 (337)
Q Consensus       224 ~v~~na~~l~~~L~~----~G~~v~~~-----~-----------------------t~~h~v~V~~---------~~~~~  262 (337)
                      +.+++++.+++++++    .+|++.+.     .                       -|.--+.|.+         +..|+
T Consensus       302 ~~i~~a~~~R~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~whgf~~~~~~~~~lDP~K~ti~~pG~~~~g~~~~~Gi  381 (417)
T PF01276_consen  302 EAIELAEEFRKKINRLNDIWGFKVLGPEDVGGEGCWDLDPGENWHGFEGLADDYYMLDPTKLTINTPGIDADGELSELGI  381 (417)
T ss_dssp             HHHHHHHHHHHHHHHHCCT-SSEESS-SEECTCCGCB--TT-TTT--TT--TTSEEE-TTEEEEE-STBETTSSB-SS--
T ss_pred             HHHHHHHHHHHHHHhcCCCceEecCCccccCCccccccCccccchhchhcccCccccCCcEEEEEccCcCcCCcccccCC
Confidence            999999999999943    56666541     1                       1444566776         67899


Q ss_pred             chHHHHHHHhhcCceeccCc
Q psy10669        263 TGSKVELVLEEIAIACNKNT  282 (337)
Q Consensus       263 ~~~~~~~~L~~~gI~v~~~~  282 (337)
                      ++.++.+.|.+.||.+++..
T Consensus       382 ~g~~~~~~L~~~~I~~Ek~d  401 (417)
T PF01276_consen  382 PGYIVEKYLREHGIQVEKTD  401 (417)
T ss_dssp             -HHHHHHHHHHTTEE-SEEE
T ss_pred             CHHHHHHHHHHcCCEEEecc
Confidence            99999999999999999855

One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.

>PRK13520 L-tyrosine decarboxylase; Provisional

Probab=99.58  E-value=5.1e-13  Score=129.32  Aligned_cols=258  Identities=15%  Similarity=0.166  Sum_probs=165.2

Q ss_pred             cHHHHHHHHHHHhhccc--ceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCC
Q psy10669         15 DPELYSLIKKEKHRQIN--GIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLD   92 (337)
Q Consensus        15 d~~~~~~~~~e~~rq~~--~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~   92 (337)
                      +.|+.+++++-.+++..  .| |=.+..+.+|.+.+++...+...  .|.+  +.+.+.   .+++..+++.+++++|++
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~~~~--~~~~--~~~~~~---~~~~~~~~~~la~~~g~~   75 (371)
T PRK13520          4 EEEILEELEEYRSEDLKYERI-LSSMCTEPHPIARKAHEMFLETN--LGDP--GLFPGT---AKLEEEAVEMLGELLHLP   75 (371)
T ss_pred             HHHHHHHHHHHHhcCCCHHHe-eeeeecCchHHHHHHHHHHHhcC--CCCc--ccCccH---HHHHHHHHHHHHHHhCCC
Confidence            56777777654444221  22 33335666899999987654432  2333  224442   345556678999999987


Q ss_pred             CCCCcceeecCCCchhHHHHHHhhCC------c-------------------------------------cc--c---cc
Q psy10669         93 PEQWGCNVQPYSGSPANFAVCEKALP------T-------------------------------------NN--A---RF  124 (337)
Q Consensus        93 ~~~~~~~v~~~Sgt~AN~~v~~aLl~------~-------------------------------------~~--a---~p  124 (337)
                      .+   ..+...+|+.||..++.++..      +                                     .+  +   ++
T Consensus        76 ~~---~~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~  152 (371)
T PRK13520         76 DA---YGYITSGGTEANIQAVRAARNLAKAEKPNIVVPESAHFSFDKAADMLGVELRRAPLDDDYRVDVKAVEDLIDDNT  152 (371)
T ss_pred             CC---CeEEecCcHHHHHHHHHHHHhhccCCCceEEecCcchHHHHHHHHHcCceEEEecCCCCCcCCHHHHHHHHhhCC
Confidence            63   124455668999887665521      1                                     01  1   14


Q ss_pred             cEEEEcC--cccccccChHHHHHHhhhcCCeEEEeccccccccc-------------ee---e-eecc-------CCchh
Q psy10669        125 DFLSSGT--TCYSRCLDYARFRQICDETDSIMFADMSHISGLIA-------------GV---K-GVTK-------TGEKI  178 (337)
Q Consensus       125 klII~~~--S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-------------g~---~-~T~~-------~Gg~i  178 (337)
                      ++|++..  +..+...|+++|.++|+++|++++||+||+.|.++             ++   + +++|       .|+++
T Consensus       153 ~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K~~~a~~~~G~~~  232 (371)
T PRK13520        153 IGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSITIDPHKMGLAPIPAGGIL  232 (371)
T ss_pred             EEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCCceEEECCccccCccCCceEEE
Confidence            4455332  34678899999999999999999999999866532             11   1 1222       13344


Q ss_pred             hh--hHHHHHhhccCCCC--------CCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCC
Q psy10669        179 LY--DYEEKINNAVFPSL--------QGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGT  248 (337)
Q Consensus       179 ~~--~l~~~i~~~~~p~~--------~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t  248 (337)
                      +.  ++.+.+.. ..|+.        .||++.+.++++..++..+.+..+++++++..+++++|.+.|.+.|++++.. .
T Consensus       233 ~~~~~~~~~l~~-~~~~~~~~~~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~  310 (371)
T PRK13520        233 FRDESYLDALAV-DTPYLTSKKQATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKERGFEPVIE-P  310 (371)
T ss_pred             EcCHHHHHhhcc-cCccccCCCCcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhCCCEEecC-C
Confidence            33  35454431 12332        2455666788888888776555678899999999999999999999984432 4


Q ss_pred             CCeEEEEEecCCCcchHHHHHHHhhcCceeccCc---ccchhhh
Q psy10669        249 DVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT---GISLAAE  289 (337)
Q Consensus       249 ~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~---girig~~  289 (337)
                      ..+++.+.+.    ++.++.+.|.+.||.+....   .+||+..
T Consensus       311 ~~~~v~~~~~----~~~~v~~~L~~~gi~v~~~~~~~~iRis~~  350 (371)
T PRK13520        311 VLNIVAFDDP----NPDEVREKLRERGWRVSVTRCPEALRIVCM  350 (371)
T ss_pred             CceEEEEecC----CHHHHHHHHHHCCceeccCCCCCEEEEEEE
Confidence            5666666553    46788888988899987643   5888643

>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative

Probab=99.57  E-value=6.7e-13  Score=129.32  Aligned_cols=233  Identities=16%  Similarity=0.194  Sum_probs=157.9

Q ss_pred             cceeeeccC--CC-CCHHHHHHHhhhhhhccCCCCCCCcCcCccchH-HHHHHHHHHHHHhhcCCCCCCCcceeecCCCc
Q psy10669         31 NGIELIASE--NF-TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFI-DEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGS  106 (337)
Q Consensus        31 ~~i~l~ase--n~-~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~-~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt  106 (337)
                      +-|+|...+  .+ .+|.+.+++... ..+|+.+.++.+...|.... ++++    +++++++|.+.     ++.++||+
T Consensus        34 ~~id~~~~~~~g~~~~~~~~~a~~~~-~~~~~~~~~~~~~~~g~~~l~~~l~----~~l~~~~g~~~-----~i~~~sG~  103 (385)
T TIGR01825        34 EVINLSSNNYLGFADHPRLKEAAAQA-IQQYGVGAGAVRTIAGTLRLHEELE----EKLAKFKKTEA-----ALVFQSGF  103 (385)
T ss_pred             eEEEeeccCccCCCCCHHHHHHHHHH-HHHcCCCCCccCcccCCcHHHHHHH----HHHHHHhCCCc-----EEEECcHH
Confidence            346665432  23 599999998765 44565555566677777544 4555    57788899764     68899999


Q ss_pred             hhHHHHHHhhCCc-------------------------------------c-c--c---cccEEEEcCccc---ccccCh
Q psy10669        107 PANFAVCEKALPT-------------------------------------N-N--A---RFDFLSSGTTCY---SRCLDY  140 (337)
Q Consensus       107 ~AN~~v~~aLl~~-------------------------------------~-~--a---~pklII~~~S~~---~~~~d~  140 (337)
                      .+|+.++.+++++                                     + +  .   ++++|++++ .+   +...|+
T Consensus       104 ~a~~~a~~~~~~~gd~vi~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~v~~~~-v~~~tG~~~~~  182 (385)
T TIGR01825       104 NTNQGVLSALLRKGDIVLSDELNHASIIDGLRLTKATKKIYKHADMDDLDRVLRENPSYGKKLIVTDG-VFSMDGDVAPL  182 (385)
T ss_pred             HHHHHHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEeCCCCHHHHHHHHHhhccCCCeEEEEec-CCcCCCCccCH
Confidence            9999888888764                                     0 0  1   246777663 33   345689


Q ss_pred             HHHHHHhhhcCCeEEEeccccccccc----------e-------eeeec-c----CCchhhh--hHHHHHhhccCCCCCC
Q psy10669        141 ARFRQICDETDSIMFADMSHISGLIA----------G-------VKGVT-K----TGEKILY--DYEEKINNAVFPSLQG  196 (337)
Q Consensus       141 ~~l~eia~~~ga~l~vD~AH~~Gli~----------g-------~~~T~-~----~Gg~i~~--~l~~~i~~~~~p~~~g  196 (337)
                      ++|.++|+++|+++++|++|..|.++          +       +.+|. |    .||+++.  ++.+.+.....+..++
T Consensus       183 ~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~gG~~~~~~~~~~~~~~~~~~~~~~  262 (385)
T TIGR01825       183 PEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLEDKVDIQVGTLSKAIGVVGGYAAGHKELIEYLKNRARPFLFS  262 (385)
T ss_pred             HHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCCcCCcEEEEeccHHhhcCCCEEecCHHHHHHHHHhCcccccc
Confidence            99999999999999999999877543          1       12333 2    3677765  5666665543444444


Q ss_pred             C-CcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcC
Q psy10669        197 G-PHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIA  275 (337)
Q Consensus       197 ~-~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~g  275 (337)
                      + ++++..+++..++..+.+  ..++.+++.++.+++.+.|.+.|+++..  ++.+++++.+... .+..++.+.|.+.|
T Consensus       263 ~~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~g~~~~~--~~~~~~~~~~~~~-~~~~~~~~~L~~~g  337 (385)
T TIGR01825       263 TAQPPAVVAALAAAVDELQR--SPELMERLWDNTRFFKAGLGKLGYDTGG--SETPITPVVIGDE-KAAQEFSRRLFDEG  337 (385)
T ss_pred             CCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHcCCCCCC--CCCCEEEEEECCH-HHHHHHHHHHHHCC
Confidence            4 566777777777766532  3467888899999999999999998865  4455666655432 24556667776669


Q ss_pred             ceec
Q psy10669        276 IACN  279 (337)
Q Consensus       276 I~v~  279 (337)
                      |.+.
T Consensus       338 i~v~  341 (385)
T TIGR01825       338 IFAQ  341 (385)
T ss_pred             cEEc
Confidence            9985

This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.

>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein

Probab=99.57  E-value=4.3e-13  Score=130.15  Aligned_cols=230  Identities=14%  Similarity=0.146  Sum_probs=153.3

Q ss_pred             CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHhhCCc-
Q psy10669         42 TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEKALPT-  119 (337)
Q Consensus        42 ~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~aLl~~-  119 (337)
                      .|+.|++++...+. ++. +.++...|.-..........+++.++++||++.+   .+|.+++| +.++..++.+++++ 
T Consensus        12 ~p~~v~~a~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~---~~v~~~~g~t~al~~~~~~~~~~g   86 (376)
T TIGR01977        12 KPDEVYEAMADFYK-NYG-GSPGRGRYRLALRASREVEETRQLLAKLFNAPSS---AHVVFTNNATTALNIALKGLLKEG   86 (376)
T ss_pred             CCHHHHHHHHHHHH-hcC-CCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCC---CeEEEeCCHHHHHHHHHHhccCCC
Confidence            57899999976644 332 2333332321111223334455789999998752   25777655 77877777887653 


Q ss_pred             --------------------------------------------ccc---cccEEEEcCc--ccccccChHHHHHHhhhc
Q psy10669        120 --------------------------------------------NNA---RFDFLSSGTT--CYSRCLDYARFRQICDET  150 (337)
Q Consensus       120 --------------------------------------------~~a---~pklII~~~S--~~~~~~d~~~l~eia~~~  150 (337)
                                                                  +.+   +|++|++...  ..+...|+++|.++|+++
T Consensus        87 d~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~~v~~~~~~n~tG~~~~~~~i~~l~~~~  166 (376)
T TIGR01977        87 DHVITTPMEHNSVARPLECLKEQIGVEITIVKCDNEGLISPERIKRAIKTNTKLIVVSHASNVTGTILPIEEIGELAQEN  166 (376)
T ss_pred             CEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHhcCCCCeEEEEECCCCCccccCCHHHHHHHHHHc
Confidence                                                        001   2677777632  246889999999999999


Q ss_pred             CCeEEEeccccccccc------e---ee-eecc-----CC--chhhh-hHHHHHhhccC------------------CCC
Q psy10669        151 DSIMFADMSHISGLIA------G---VK-GVTK-----TG--EKILY-DYEEKINNAVF------------------PSL  194 (337)
Q Consensus       151 ga~l~vD~AH~~Gli~------g---~~-~T~~-----~G--g~i~~-~l~~~i~~~~~------------------p~~  194 (337)
                      |+++++|++|++|.+.      +   +. +++|     .|  ++++. +.  .+.+...                  .+-
T Consensus       167 ~~~livD~a~~~g~~~~~~~~~~~D~~~~s~~K~l~~p~g~g~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~r~~  244 (376)
T TIGR01977       167 GIFFILDAAQTAGVIPIDMTELAIDMLAFTGHKGLLGPQGTGGLYIREGI--KLKPLKSGGTGSHSALIDQPSELPDRFE  244 (376)
T ss_pred             CCEEEEEhhhccCccCCCchhcCCCEEEecccccccCCCCceEEEEcCCc--CcCceecCCCccccccccccccchhhcc
Confidence            9999999999999886      1   22 2332     23  34444 21  1111100                  123


Q ss_pred             CCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-CCCEEecC-CC--CCeEEEEEecCCCcchHHHHHH
Q psy10669        195 QGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-RGYHVVTG-GT--DVHLILIDLRKNKLTGSKVELV  270 (337)
Q Consensus       195 ~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~G~~v~~~-~t--~~h~v~V~~~~~~~~~~~~~~~  270 (337)
                      .||++.+.++++..+++++.+...+..+++..++++++.+.|.+ .|+++++. .+  ..+++.+.+  .+.++.++.+.
T Consensus       245 ~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~~~  322 (376)
T TIGR01977       245 SGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVGVVSFTV--EGIDSEEVADI  322 (376)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCCeEEEEE--CCCCHHHHHHH
Confidence            57899999999999999987666678889999999999999986 67888752 12  234555554  45678889999


Q ss_pred             Hhhc-Cceecc
Q psy10669        271 LEEI-AIACNK  280 (337)
Q Consensus       271 L~~~-gI~v~~  280 (337)
                      |.+. ||.+..
T Consensus       323 L~~~~gi~v~~  333 (376)
T TIGR01977       323 LDEKFDIATRT  333 (376)
T ss_pred             HhccCCEEEEc
Confidence            9875 999865

This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.

>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase

Probab=99.56  E-value=6.4e-13  Score=131.69  Aligned_cols=237  Identities=12%  Similarity=0.076  Sum_probs=158.6

Q ss_pred             eccCCCCCHHHHHHHhhhhhhccCCCCCCCcC-cCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHH
Q psy10669         36 IASENFTSLAVLECLGSCLQNKYSEGLPGKRY-YGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVC  113 (337)
Q Consensus        36 ~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~-~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~  113 (337)
                      .++-..+++.|++++...+...+  +++.++. +.+.+..+.+ ..+|+.+++++|++.+   -+|.+++| |.++..++
T Consensus        38 ~a~~~~~p~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~r~~la~~~~~~~~---~~v~~t~g~t~al~~i~  111 (424)
T PLN02855         38 NAATSQKPAAVLDALQDYYEEYN--SNVHRGIHALSAKATDAY-ELARKKVAAFINASTS---REIVFTRNATEAINLVA  111 (424)
T ss_pred             CccccCCCHHHHHHHHHHHHhcC--CCCCCccchHHHHHHHHH-HHHHHHHHHHcCCCCC---CEEEEeCCHHHHHHHHH
Confidence            36666779999999977654332  3443322 2222333333 4678899999999642   26888777 66755555


Q ss_pred             Hhh----CCc-------------------------------------------cc-----ccccEEEEcCcc--cccccC
Q psy10669        114 EKA----LPT-------------------------------------------NN-----ARFDFLSSGTTC--YSRCLD  139 (337)
Q Consensus       114 ~aL----l~~-------------------------------------------~~-----a~pklII~~~S~--~~~~~d  139 (337)
                      .++    +++                                           .+     .++++|++.+-+  .+...|
T Consensus       112 ~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~~~~~~~~l~~~i~~~t~lv~i~~~~n~tG~~~~  191 (424)
T PLN02855        112 YTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPDEVLDVEQLKELLSEKTKLVATHHVSNVLGSILP  191 (424)
T ss_pred             HHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCCCCcCHHHHHHHhccCceEEEEeCccccccccCC
Confidence            542    222                                           00     126888887433  368999


Q ss_pred             hHHHHHHhhhcCCeEEEeccccccccc------e---eeee-cc----CC-chhhh--hHHHHHhhcc------------
Q psy10669        140 YARFRQICDETDSIMFADMSHISGLIA------G---VKGV-TK----TG-EKILY--DYEEKINNAV------------  190 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~~Gli~------g---~~~T-~~----~G-g~i~~--~l~~~i~~~~------------  190 (337)
                      +++|.++|+++|+++++|++|..|.+.      +   ++++ +|    .| |++..  ++.+++.+..            
T Consensus       192 ~~~I~~l~~~~g~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~  271 (424)
T PLN02855        192 VEDIVHWAHAVGAKVLVDACQSVPHMPVDVQTLGADFLVASSHKMCGPTGIGFLWGKSDLLESMPPFLGGGEMISDVFLD  271 (424)
T ss_pred             HHHHHHHHHHcCCEEEEEhhhhcCCcCCCchhcCCCEEEeecccccCCCccEEEEEchhhhhcCCCEecCCCceeeeecC
Confidence            999999999999999999999998776      1   2233 32    34 45432  4444333210            


Q ss_pred             ----C--C--CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCC---C--CeEEEEE
Q psy10669        191 ----F--P--SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGT---D--VHLILID  256 (337)
Q Consensus       191 ----~--p--~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t---~--~h~v~V~  256 (337)
                          .  |  +-.||++.+.++++..++..+.+...++.++++.+.+++|++.|.+. |+++++...   +  +.++.+.
T Consensus       272 ~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~~r~~~v~~~  351 (424)
T PLN02855        272 HSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELGTYLYEKLSSVPGVRIYGPKPSEGVGRAALCAFN  351 (424)
T ss_pred             ccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCcccccCcccEEEEE
Confidence                0  1  22689999999999999998876667788899999999999999885 999986311   1  2344444


Q ss_pred             ecCCCcchHHHHHHHhhc-Cceecc
Q psy10669        257 LRKNKLTGSKVELVLEEI-AIACNK  280 (337)
Q Consensus       257 ~~~~~~~~~~~~~~L~~~-gI~v~~  280 (337)
                      +  .+.++.++.+.|.+. ||.+..
T Consensus       352 ~--~~~~~~~v~~~L~~~~gI~v~~  374 (424)
T PLN02855        352 V--EGIHPTDLSTFLDQQHGVAIRS  374 (424)
T ss_pred             E--CCcCHHHHHHHhcccCCEEEec
Confidence            4  456778889999875 998774

>cd06453 SufS_like Cysteine desulfurase (SufS)-like

Probab=99.56  E-value=8e-13  Score=128.25  Aligned_cols=238  Identities=11%  Similarity=0.060  Sum_probs=166.3

Q ss_pred             eccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHH
Q psy10669         36 IASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCE  114 (337)
Q Consensus        36 ~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~  114 (337)
                      .++...+|+.+.+++...+...  .++|.++.+.......+....+++.++++||.+.+   .++.+++| +.++..++.
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~---~~v~~~~g~t~a~~~~~~   79 (373)
T cd06453           5 NAATSQKPQPVIDAIVDYYRHY--NANVHRGVHELSARATDAYEAAREKVARFINAPSP---DEIIFTRNTTEAINLVAY   79 (373)
T ss_pred             CccccCCCHHHHHHHHHHHHhc--CCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCC---CeEEEeCCHHHHHHHHHH
Confidence            4577788999999998776532  35666655555555555555667899999999833   35666666 677555556


Q ss_pred             hhCC---c---------------------------------------------c--cc-cccEEEEcCcc--cccccChH
Q psy10669        115 KALP---T---------------------------------------------N--NA-RFDFLSSGTTC--YSRCLDYA  141 (337)
Q Consensus       115 aLl~---~---------------------------------------------~--~a-~pklII~~~S~--~~~~~d~~  141 (337)
                      ++..   +                                             +  +. ++++|++....  .+...|++
T Consensus        80 ~l~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~~~  159 (373)
T cd06453          80 GLGRANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDDDGQLDLEALEKLLTERTKLVAVTHVSNVLGTINPVK  159 (373)
T ss_pred             HhhhcCCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecCCCCCcCHHHHHHHhcCCceEEEEeCcccccCCcCCHH
Confidence            7644   3                                             0  01 26888876443  35888999


Q ss_pred             HHHHHhhhcCCeEEEeccccccccc------e---eeee-cc----CC-chhhh--hHHHHHhhccCC------------
Q psy10669        142 RFRQICDETDSIMFADMSHISGLIA------G---VKGV-TK----TG-EKILY--DYEEKINNAVFP------------  192 (337)
Q Consensus       142 ~l~eia~~~ga~l~vD~AH~~Gli~------g---~~~T-~~----~G-g~i~~--~l~~~i~~~~~p------------  192 (337)
                      +|.++|+++|++|++|++|..|.+.      +   ++++ +|    .| |+++.  ++.+.+.+....            
T Consensus       160 ~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~g~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  239 (373)
T cd06453         160 EIGEIAHEAGVPVLVDGAQSAGHMPVDVQDLGCDFLAFSGHKMLGPTGIGVLYGKEELLEEMPPYGGGGEMIEEVSFEET  239 (373)
T ss_pred             HHHHHHHHcCCEEEEEhhhhcCceeeeccccCCCEEEeccccccCCCCcEEEEEchHHhhcCCCeecCCCcccccccccc
Confidence            9999999999999999999998775      1   2233 23    23 65544  344444432110            


Q ss_pred             --------CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecC-CCCCeEEEEEecCCCc
Q psy10669        193 --------SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTG-GTDVHLILIDLRKNKL  262 (337)
Q Consensus       193 --------~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~-~t~~h~v~V~~~~~~~  262 (337)
                              ...|+++.+.+.++..+++++.+...++.+++..++++++.+.|.+. |++++.. ....+++.+.+.  +.
T Consensus       240 ~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~  317 (373)
T cd06453         240 TYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYGDAEDRAGVVSFNLE--GI  317 (373)
T ss_pred             ccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCeEEEEEC--Cc
Confidence                    11368889999999999999876666888899999999999999886 7888742 235667777664  35


Q ss_pred             chHHHHHHHhhcCceecc
Q psy10669        263 TGSKVELVLEEIAIACNK  280 (337)
Q Consensus       263 ~~~~~~~~L~~~gI~v~~  280 (337)
                      +..++.+.|.+.||.+..
T Consensus       318 ~~~~i~~~l~~~gi~i~~  335 (373)
T cd06453         318 HPHDVATILDQYGIAVRA  335 (373)
T ss_pred             CHHHHHHHHHHCCEEecc
Confidence            677888899889998753

This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.

>PLN02651 cysteine desulfurase

Probab=99.55  E-value=2.8e-13  Score=131.58  Aligned_cols=232  Identities=15%  Similarity=0.140  Sum_probs=156.9

Q ss_pred             ccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHh
Q psy10669         37 ASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEK  115 (337)
Q Consensus        37 asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~a  115 (337)
                      ++-..+++.|++++...+.+.  .++|+++.+.-.....++...++++++++||+++.    +|.+++| |.++..++.+
T Consensus         6 a~~~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~----~v~~t~~~t~a~~~~l~~   79 (364)
T PLN02651          6 QATTPIDPRVLDAMLPFLIEH--FGNPHSRTHLYGWESEDAVEKARAQVAALIGADPK----EIIFTSGATESNNLAIKG   79 (364)
T ss_pred             cCCCCCCHHHHHHHHHHHHhC--CCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC----eEEEeCCHHHHHHHHHHH
Confidence            344567999999998765543  36666533322233445555678899999999862    5777666 6776555554


Q ss_pred             h----CCc------------------------------------------cc--c---cccEEEEcCcc--cccccChHH
Q psy10669        116 A----LPT------------------------------------------NN--A---RFDFLSSGTTC--YSRCLDYAR  142 (337)
Q Consensus       116 L----l~~------------------------------------------~~--a---~pklII~~~S~--~~~~~d~~~  142 (337)
                      +    .++                                          .+  +   +++++++...+  .+...|+++
T Consensus        80 ~~~~~~~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~t~lv~v~~~~n~tG~~~~l~~  159 (364)
T PLN02651         80 VMHFYKDKKKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVKSDGLVDLDELAAAIRPDTALVSVMAVNNEIGVIQPVEE  159 (364)
T ss_pred             HHHhccCCCCEEEEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhcCCCcEEEEEECCCCCceecccHHH
Confidence            4    222                                          00  0   25778776433  468899999


Q ss_pred             HHHHhhhcCCeEEEeccccccccc------e---e-eeecc----CC-chh-hh-hHHHHHhhccC------CCCCCCCc
Q psy10669        143 FRQICDETDSIMFADMSHISGLIA------G---V-KGVTK----TG-EKI-LY-DYEEKINNAVF------PSLQGGPH  199 (337)
Q Consensus       143 l~eia~~~ga~l~vD~AH~~Gli~------g---~-~~T~~----~G-g~i-~~-~l~~~i~~~~~------p~~~g~~~  199 (337)
                      |.++|+++|++++||++|++|.+.      +   + .+.+|    .| |++ +. +..+.+++...      ....||++
T Consensus       160 I~~~~~~~g~~~~vD~a~~~g~~~~~~~~~~~D~~~~s~hK~~gp~G~g~l~v~~~~~~~l~p~~~g~~~~~~~~~GT~~  239 (364)
T PLN02651        160 IGELCREKKVLFHTDAAQAVGKIPVDVDDLGVDLMSISGHKIYGPKGVGALYVRRRPRVRLEPLMSGGGQERGRRSGTEN  239 (364)
T ss_pred             HHHHHHHcCCEEEEEcchhhCCcccCcccCCCCEEEechhhhCCCCceEEEEEcCCCCCCCCccccCCCccCCccCCCcc
Confidence            999999999999999999999876      1   2 23333    33 443 33 22223332221      23478999


Q ss_pred             HHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh--CCCEEecC-CCC---CeEEEEEecCCCcchHHHHHHHhh
Q psy10669        200 NHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK--RGYHVVTG-GTD---VHLILIDLRKNKLTGSKVELVLEE  273 (337)
Q Consensus       200 ~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~--~G~~v~~~-~t~---~h~v~V~~~~~~~~~~~~~~~L~~  273 (337)
                      .+.++++..++..+.+ ..+..+++..+.+++|.+.|.+  .|+++++. ..+   ++++.+.+  .++++.++.+.|.+
T Consensus       240 ~~~~~~l~~al~~~~~-~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~L~~  316 (364)
T PLN02651        240 TPLVVGLGAACELAMK-EMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLNLSF--AYVEGESLLMGLKE  316 (364)
T ss_pred             HHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEEEEe--CCCCHHHHHHHhCC
Confidence            9999999999999864 5677788999999999999875  39999873 222   33555544  46788899999976


Q ss_pred             cCceec
Q psy10669        274 IAIACN  279 (337)
Q Consensus       274 ~gI~v~  279 (337)
                        |.+.
T Consensus       317 --i~v~  320 (364)
T PLN02651        317 --VAVS  320 (364)
T ss_pred             --EEEE
Confidence              6665

>PRK13237 tyrosine phenol-lyase; Provisional

Probab=99.51  E-value=1e-12  Score=130.17  Aligned_cols=227  Identities=15%  Similarity=0.250  Sum_probs=155.5

Q ss_pred             eeccCCCC----CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHH
Q psy10669         35 LIASENFT----SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANF  110 (337)
Q Consensus        35 l~asen~~----~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~  110 (337)
                      ++.|+++.    |..+-.+|....   ++.-.-|.-.|+|.....++|    +.++++||.++     .|-.+||+.|+.
T Consensus        40 ~l~~~~v~IDLlSDS~T~aMs~~q---~a~~~vGDd~Yagd~s~~~LE----~~vAe~lG~e~-----aV~v~sGTaAl~  107 (460)
T PRK13237         40 LLRSEDVYIDLLTDSGTNAMSDRQ---WAGMMIGDEAYAGSRNFYHLE----ETVQEYYGFKH-----VVPTHQGRGAEN  107 (460)
T ss_pred             cCCcCcEEEECcccCCchhccHHH---HHHHhhcchhhcCCCcHHHHH----HHHHHHHCCCe-----EEEeCCHHHHHH
Confidence            45566554    444445543320   111233555677777888999    47789999996     688889999977


Q ss_pred             HHHHhhCCc--------------------------------------------------ccc-cc---------cEEEEc
Q psy10669        111 AVCEKALPT--------------------------------------------------NNA-RF---------DFLSSG  130 (337)
Q Consensus       111 ~v~~aLl~~--------------------------------------------------~~a-~p---------klII~~  130 (337)
                      .++...+++                                                  +.+ ++         ++++..
T Consensus       108 ll~~l~v~pGd~Vp~n~~f~Tt~ahI~~~Ga~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itv  187 (460)
T PRK13237        108 LLSRIAIKPGQYVPGNMYFTTTRYHQELNGGIFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTV  187 (460)
T ss_pred             HHHHhCCCCcCEECCccchHhhHHHHHhCCcEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEec
Confidence            654433331                                                  000 11         234433


Q ss_pred             Cccc-cccc---ChHHHHHHhhhcCCeEEEecccccc---cc----c-------------------eee-eecc-----C
Q psy10669        131 TTCY-SRCL---DYARFRQICDETDSIMFADMSHISG---LI----A-------------------GVK-GVTK-----T  174 (337)
Q Consensus       131 ~S~~-~~~~---d~~~l~eia~~~ga~l~vD~AH~~G---li----~-------------------g~~-~T~~-----~  174 (337)
                       ..+ +.+.   |+++++++|+++|+.|+.|+||..|   +|    +                   +++ |++|     .
T Consensus       188 -n~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~  266 (460)
T PRK13237        188 -NLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCVENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNI  266 (460)
T ss_pred             -ccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchhcChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCC
Confidence             233 3444   7788999999999999999999999   66    1                   122 3222     3


Q ss_pred             Cchhhh---hHHHHHhhc--cCCCC--CCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCC
Q psy10669        175 GEKILY---DYEEKINNA--VFPSL--QGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGG  247 (337)
Q Consensus       175 Gg~i~~---~l~~~i~~~--~~p~~--~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~  247 (337)
                      ||+|++   ++.++++..  +|+++  +|+..-.-++|+++++.|...   .+|.++.++++++|++.|.+.|+.|+. +
T Consensus       267 GG~i~t~D~eL~~~~r~~~~~~eG~~tygg~~grd~~alAvgl~E~~~---~~y~~~ri~~~~~l~~~L~~~Gvpv~~-p  342 (460)
T PRK13237        267 GGFLAMNDEELFDEAKELVVVYEGMPSYGGMAGRDMEAMAIGIEESVQ---YEYIEHRVGQVRYLGEKLLAAGVPIVE-P  342 (460)
T ss_pred             ceEEEECCHHHHHHHHHhccccCCCcCCCChhhhHHHHHHhHHHhhch---HHHHHHHHHHHHHHHHHHHHCCCceec-C
Confidence            899886   477777755  67776  444444689999999999864   289999999999999999999999996 3


Q ss_pred             CCCeEEEEEecC-------CCcchHHHHHHHh-hcCcee
Q psy10669        248 TDVHLILIDLRK-------NKLTGSKVELVLE-EIAIAC  278 (337)
Q Consensus       248 t~~h~v~V~~~~-------~~~~~~~~~~~L~-~~gI~v  278 (337)
                      +..|.+.||...       ..+.+..+...|. +.||..
T Consensus       343 ~ggH~v~vda~~~lph~~~~~~p~~al~~~ly~~~GiR~  381 (460)
T PRK13237        343 VGGHAVFLDARRFLPHLPQDQFPAQALAAELYIESGVRS  381 (460)
T ss_pred             CCceEEEEEhHHhCCCCCcccChHHHHHHHHHHHhCcCe
Confidence            667999999654       3455666666665 467764

>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family

Probab=99.50  E-value=3.3e-12  Score=124.00  Aligned_cols=236  Identities=15%  Similarity=0.081  Sum_probs=153.0

Q ss_pred             eeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCcc---chHHHHHHHHHHHHHhhcCCCCCCCcceeecC--CCchh
Q psy10669         34 ELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGN---QFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPY--SGSPA  108 (337)
Q Consensus        34 ~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~---~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~--Sgt~A  108 (337)
                      ++.|.--.+|+.|++|+...+.+ |+  ++|+..|.-+   ....++...+|+++++|||++.+ +  .|.|+  |||.|
T Consensus         2 ~~~pGp~~~p~~V~~a~~~~~~~-~~--~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~-~--~vvf~~gs~T~a   75 (355)
T cd00611           2 NFSAGPAALPEEVLEQAQKELLD-FN--GLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDN-Y--KVLFLQGGATGQ   75 (355)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHhh-cc--cCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCC-c--eEEEEcCCchHH
Confidence            45566667899999999987644 43  7777777766   34456777899999999998433 2  46663  46788


Q ss_pred             HHHHHHhhCC---c-----------------------------c----c---------c---cccEEEEcCcccccccCh
Q psy10669        109 NFAVCEKALP---T-----------------------------N----N---------A---RFDFLSSGTTCYSRCLDY  140 (337)
Q Consensus       109 N~~v~~aLl~---~-----------------------------~----~---------a---~pklII~~~S~~~~~~d~  140 (337)
                      +.++..+|++   +                             .    .         .   ++|+|.+++...+.-.. 
T Consensus        76 ~~~~~~~l~~~~~~~~~i~~g~~~~~~~~~a~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~lV~~~h~~t~tG~~-  154 (355)
T cd00611          76 FAAVPLNLLGDKGTADYVVTGAWSAKAAKEAKRYGGVVVIVAAKEEGKYTKIPDVETWDLAPDAAYVHYCSNETIHGVE-  154 (355)
T ss_pred             HHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHhcCCCcEEEecccccCCCCCCCHhhcCCCCCCCEEEEeCCcccccEE-
Confidence            7777788865   2                             0    0         0   15777777555432222 


Q ss_pred             HHHHHHhhhcCCeEEEeccccccccc------eeeee-c-----cCC-chhh-h-hHHHHHhhc------------cCCC
Q psy10669        141 ARFRQICDETDSIMFADMSHISGLIA------GVKGV-T-----KTG-EKIL-Y-DYEEKINNA------------VFPS  193 (337)
Q Consensus       141 ~~l~eia~~~ga~l~vD~AH~~Gli~------g~~~T-~-----~~G-g~i~-~-~l~~~i~~~------------~~p~  193 (337)
                        +.++++.+|++++||++|++|.+.      ++.++ +     |.| |++. . ++.+++.+.            -.| 
T Consensus       155 --~~~i~~~~g~~~~VDa~qs~g~~~idv~~~~~~~ss~~K~lGP~G~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  231 (355)
T cd00611         155 --FDEVPDTGGVPLVADMSSNILSRPIDVSKFGVIYAGAQKNLGPAGVTVVIVRKDLLGKARKITPSMLNYKTHADNNS-  231 (355)
T ss_pred             --cceecccCCCeEEEEccccccCCCCCHHHhCEEEeecccccCCCceEEEEECHHHHhhcccCCCCcccHHHHHhcCC-
Confidence              336777799999999999999998      34444 3     334 4443 3 333322221            111 


Q ss_pred             CCCCCcHHHHHHHHHHHHHHhch-hhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeE-EEEEecCCCc-chHHHHH
Q psy10669        194 LQGGPHNHAIGAIATAMLQAQSD-EFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHL-ILIDLRKNKL-TGSKVEL  269 (337)
Q Consensus       194 ~~g~~~~~~iaala~a~~e~~~~-~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~-v~V~~~~~~~-~~~~~~~  269 (337)
                      ..+||+.+.+.++..+++++.+. ..+...++..+++++|.+.|.+. |+.......+.+. +++.+.-.+. ...+..+
T Consensus       232 ~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~vvsf~~~~~~l~~~~~~  311 (355)
T cd00611         232 LYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRARSRMNVPFRLGKEELEKEFLK  311 (355)
T ss_pred             CCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHHHcCceEEEEEcCChhhhHHHHH
Confidence            25899999999999999999766 57888999999999999999997 8521111111232 2355554442 1122324


Q ss_pred             HHhhcCceec
Q psy10669        270 VLEEIAIACN  279 (337)
Q Consensus       270 ~L~~~gI~v~  279 (337)
                      .+.+.||.+.
T Consensus       312 ~~~r~G~~~~  321 (355)
T cd00611         312 EAEAAGMIGL  321 (355)
T ss_pred             HHHHCCCccc
Confidence            5556788643

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.

>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase

Probab=99.50  E-value=6.8e-12  Score=121.60  Aligned_cols=242  Identities=14%  Similarity=0.058  Sum_probs=158.9

Q ss_pred             ceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeec-CCCchhHH
Q psy10669         32 GIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQP-YSGSPANF  110 (337)
Q Consensus        32 ~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~-~Sgt~AN~  110 (337)
                      .+.|.|-=-.+++.|++++....      +.      .+.+ ..++...+++.++++||+++.+  ..+.+ .|||.++.
T Consensus         4 ~~l~~pgp~~~~~~v~~~~~~~~------~~------~~~~-~~~~~~~~r~~la~l~~~~~~~--~~i~~t~~~t~al~   68 (363)
T TIGR02326         4 YLLLTPGPLTTSRTVKEAMLFDW------CT------WDSD-YNIVVEQIRQQLLALATAEEGY--TSVLLQGSGTFAVE   68 (363)
T ss_pred             eeEecCCCCCCCHHHHHHhCCCC------CC------CChH-HHHHHHHHHHHHHHHhCCCCCc--eEEEEcCCCHHHHH
Confidence            34566666667899998876432      11      1123 3344456788999999997521  14555 45588988


Q ss_pred             HHHHhhCCc-------------------------------------------cc--c-c--ccEEEEc--CcccccccCh
Q psy10669        111 AVCEKALPT-------------------------------------------NN--A-R--FDFLSSG--TTCYSRCLDY  140 (337)
Q Consensus       111 ~v~~aLl~~-------------------------------------------~~--a-~--pklII~~--~S~~~~~~d~  140 (337)
                      .++.+++.+                                           +.  . .  ++++.+.  ++..+...|+
T Consensus        69 ~~~~~l~~~~~~vlv~~~~~~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~i  148 (363)
T TIGR02326        69 AVIGSAVPKDGKLLVVINGAYGARIVQIAEYLGIPHHVVDTGEVEPPDVVEVEAILAADPAITHIALVHCETTTGILNPI  148 (363)
T ss_pred             HHHHhcCCCCCeEEEEeCChhhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhCCCccEEEEEeecCCccccCcH
Confidence            888888543                                           00  0 1  3444433  4445788999


Q ss_pred             HHHHHHhhhcCCeEEEeccccccccc---------eeeee-cc-----CC-chhhh--hHHHHHhhccC-----------
Q psy10669        141 ARFRQICDETDSIMFADMSHISGLIA---------GVKGV-TK-----TG-EKILY--DYEEKINNAVF-----------  191 (337)
Q Consensus       141 ~~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T-~~-----~G-g~i~~--~l~~~i~~~~~-----------  191 (337)
                      ++|.++|+++|++++||++|+.|.+.         .++++ +|     .| |++..  +..+++.+...           
T Consensus       149 ~~I~~l~~~~g~~livD~~~~~g~~~~~~~~~~~D~~~~s~~K~l~~p~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (363)
T TIGR02326       149 EAVAKLAHRHGKVTIVDAMSSFGGIPIDIAELHIDYLISSANKCIQGVPGFGFVIARQAELAACKGNARSLSLDLYDQWR  228 (363)
T ss_pred             HHHHHHHHHcCCEEEEEccccccCcccchhhcCccEEEecCccccccCCcceEEEECHHHHHHhhcCCCceeecHHHHHH
Confidence            99999999999999999999998876         12333 33     35 66543  34333321111           


Q ss_pred             -----CC-CCCCCcHHHHHHHHHHHHHHhch-hhHHHHHHHHHHHHHHHHHHHhCCCEEecC-CCCCeEE-EEEecCC-C
Q psy10669        192 -----PS-LQGGPHNHAIGAIATAMLQAQSD-EFKSYQAQVKANASHLSDEMIKRGYHVVTG-GTDVHLI-LIDLRKN-K  261 (337)
Q Consensus       192 -----p~-~~g~~~~~~iaala~a~~e~~~~-~~~~y~~~v~~na~~l~~~L~~~G~~v~~~-~t~~h~v-~V~~~~~-~  261 (337)
                           ++ ...+++++.+.++..++.++... .+++.++++.++.++|.+.|.+.|++++.. ...++++ .+.+... .
T Consensus       229 ~~~~~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~  308 (363)
T TIGR02326       229 CMEDNHGKWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRALGFEPLLDDEIQSPIITSFYSPEDPD  308 (363)
T ss_pred             HHhccCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCeeccCcccCCceEEEEECCCCCC
Confidence                 11 12267889999999999888654 357788999999999999999999998752 2234433 3443322 2


Q ss_pred             cchHHHHHHHhhcCceeccCc-----ccchhh
Q psy10669        262 LTGSKVELVLEEIAIACNKNT-----GISLAA  288 (337)
Q Consensus       262 ~~~~~~~~~L~~~gI~v~~~~-----girig~  288 (337)
                      ++...+.+.|.+.||.+.+-.     .||||.
T Consensus       309 ~~~~~v~~~L~~~gi~v~~g~~~~~~~iRi~~  340 (363)
T TIGR02326       309 YRFADFYQRLKEQGFVIYPGKVSQVDCFRIGN  340 (363)
T ss_pred             CCHHHHHHHHHHCCEEEECCcCCCCCEEEEec
Confidence            466778888988899996532     678873

Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.

>TIGR03402 FeS_nifS cysteine desulfurase NifS

Probab=99.50  E-value=3.1e-12  Score=124.66  Aligned_cols=232  Identities=15%  Similarity=0.165  Sum_probs=154.3

Q ss_pred             ccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHh
Q psy10669         37 ASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEK  115 (337)
Q Consensus        37 asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~a  115 (337)
                      ++...+++.|++++...+...  .|+|++.... .....++...+++.++++||++..    .|.+++| +.++..++.+
T Consensus         6 aa~~~~~~~v~~a~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~r~~la~~~g~~~~----~i~~t~~~t~a~~~al~~   78 (379)
T TIGR03402         6 NATTRVDPEVLEAMLPYFTEY--FGNPSSMHSF-GGEVGKAVEEAREQVAKLLGAEPD----EIIFTSGGTESDNTAIKS   78 (379)
T ss_pred             cCCCCCCHHHHHHHHHHHHhc--CCCCCcccHH-HHHHHHHHHHHHHHHHHHhCCCCC----eEEEeCcHHHHHHHHHHH
Confidence            455677999999998766543  4677653222 222334445677899999999852    4667655 7787666665


Q ss_pred             hC---Cc---------------------------------------------ccc--cccEEEEcCc-c-cccccChHHH
Q psy10669        116 AL---PT---------------------------------------------NNA--RFDFLSSGTT-C-YSRCLDYARF  143 (337)
Q Consensus       116 Ll---~~---------------------------------------------~~a--~pklII~~~S-~-~~~~~d~~~l  143 (337)
                      ++   ++                                             +..  +++++++... + .+...|+++|
T Consensus        79 ~~~~~~~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~g~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~~~~I  158 (379)
T TIGR03402        79 ALAAQPEKRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDEEGRLDLEELRAAITDDTALVSVMWANNETGTIFPIEEI  158 (379)
T ss_pred             HHHhcCCCCeEEEcccccHHHHHHHHHHHHcCCEEEEEccCCCCcCCHHHHHHhcCCCcEEEEEEcccCCeeecccHHHH
Confidence            52   21                                             000  2677776532 2 3699999999


Q ss_pred             HHHhhhcCCeEEEeccccccccc------e---ee-eecc----CC-chhh-h-hHHHHHhhccC------CCCCCCCcH
Q psy10669        144 RQICDETDSIMFADMSHISGLIA------G---VK-GVTK----TG-EKIL-Y-DYEEKINNAVF------PSLQGGPHN  200 (337)
Q Consensus       144 ~eia~~~ga~l~vD~AH~~Gli~------g---~~-~T~~----~G-g~i~-~-~l~~~i~~~~~------p~~~g~~~~  200 (337)
                      .++|+++|+++++|++|+.|.+.      +   +. +.+|    .| |++. . +.  .+.+...      ....|+++.
T Consensus       159 ~~l~~~~g~~vivD~~~~~g~~~~~~~~~~~D~~~~s~~K~~gp~G~g~l~v~~~~--~~~p~~~g~~~~~~~~~gt~~~  236 (379)
T TIGR03402       159 GEIAKERGALFHTDAVQAVGKIPIDLKEMNIDMLSLSGHKLHGPKGVGALYIRKGT--RFRPLLRGGHQERGRRAGTENV  236 (379)
T ss_pred             HHHHHHcCCEEEEECcccccccccCcccCCCCEEEEcHHHcCCCCceEEEEECCCC--CCCCcccCCccCCCcCCCCccH
Confidence            99999999999999999999776      1   22 2222    33 3332 2 21  1122111      123689999


Q ss_pred             HHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh--CCCEEecCCCC--CeEEEEEecCCCcchHHHHHHHhhcCc
Q psy10669        201 HAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK--RGYHVVTGGTD--VHLILIDLRKNKLTGSKVELVLEEIAI  276 (337)
Q Consensus       201 ~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~--~G~~v~~~~t~--~h~v~V~~~~~~~~~~~~~~~L~~~gI  276 (337)
                      +.+.++..++.++. ...++..++..++.+++.+.|.+  .|+++.+....  ++++.+.+  .+.++.++...|++.||
T Consensus       237 ~~~~~l~~al~~~~-~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~gI  313 (379)
T TIGR03402       237 PGIVGLGKAAELAT-EHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISF--EYIEGEAILLLLDMEGI  313 (379)
T ss_pred             HHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEEe--cCCCHHHHHHhhccCCE
Confidence            99999999998875 35567778888889999999875  58888753221  23444444  35578889999998999


Q ss_pred             eecc
Q psy10669        277 ACNK  280 (337)
Q Consensus       277 ~v~~  280 (337)
                      .+..
T Consensus       314 ~v~~  317 (379)
T TIGR03402       314 CASS  317 (379)
T ss_pred             EEEc
Confidence            9874

Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.

>TIGR01814 kynureninase kynureninase

Probab=99.49  E-value=4.5e-12  Score=125.02  Aligned_cols=247  Identities=11%  Similarity=0.071  Sum_probs=158.6

Q ss_pred             cceeee-ccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chh
Q psy10669         31 NGIELI-ASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPA  108 (337)
Q Consensus        31 ~~i~l~-asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~A  108 (337)
                      +.+.|- ++--.+|+.|.+++... ...|+.+..++++.+..... .++... +++ +++|+++.    +|.|++| |.+
T Consensus        27 ~~iyld~~a~g~~p~~v~~a~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~-~l~g~~~~----~v~~~~~~t~~   98 (406)
T TIGR01814        27 AVIYLDGNSLGLMPKAARNALKEE-LDKWAKIAIRGHNTGKAPWF-TLDESL-LKL-RLVGAKED----EVVVMNTLTIN   98 (406)
T ss_pred             CcEEecCCCcCcCcHHHHHHHHHH-HHHHHHhhhccCccCCCChh-hhhhhh-ccc-cccCCCCC----cEEEeCCchHH
Confidence            346665 55556799999999765 34554333333332112222 222222 234 89999863    5777777 556


Q ss_pred             HHHHHHhhCCc------------------------------c------------------------c----ccccEEEEc
Q psy10669        109 NFAVCEKALPT------------------------------N------------------------N----ARFDFLSSG  130 (337)
Q Consensus       109 N~~v~~aLl~~------------------------------~------------------------~----a~pklII~~  130 (337)
                      +..++.+++++                              +                        +    .++++|++.
T Consensus        99 l~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~t~lv~~~  178 (406)
T TIGR01814        99 LHLLLASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPREEETLRLEDILDTIEKNGDDIAVILLS  178 (406)
T ss_pred             HHHHHHHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCCCCccCHHHHHHHHHhcCCCeEEEEEe
Confidence            55556776421                              0                        0    014677776


Q ss_pred             Ccc--cccccChHHHHHHhhhcCCeEEEeccccccccc------e---eeeeccC------Cch-hhh-hHHHHHhhccC
Q psy10669        131 TTC--YSRCLDYARFRQICDETDSIMFADMSHISGLIA------G---VKGVTKT------GEK-ILY-DYEEKINNAVF  191 (337)
Q Consensus       131 ~S~--~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~------g---~~~T~~~------Gg~-i~~-~l~~~i~~~~~  191 (337)
                      +.+  .+...|+++|.++|+++|++++||++|++|.+.      +   ++++.||      ||. ++. +....+.+...
T Consensus       179 ~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~~id~~~~gvD~~~~s~hK~l~g~pG~~l~v~~~~~~~~~p~~~  258 (406)
T TIGR01814       179 GVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNVPLDLHDWGVDFACWCTYKYLNAGPGAGAFVHEKHAHTERPRLA  258 (406)
T ss_pred             ccccccceecCHHHHHHHHHHcCCEEEEEcccccCCcccccccCCCCEEEEcCccccCCCCCeEEEEehhhhhhcCCCCC
Confidence            433  368999999999999999999999999999987      1   2333322      433 232 32222222100


Q ss_pred             --------------------C--CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-----CCEEe
Q psy10669        192 --------------------P--SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-----GYHVV  244 (337)
Q Consensus       192 --------------------p--~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-----G~~v~  244 (337)
                                          |  ...|||+.+.++++..++..+.+...+..++++.++++++.+.|.+.     |++++
T Consensus       259 g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~i~  338 (406)
T TIGR01814       259 GWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALRKKSLLLTDYLEELIKARCGGPPVLTII  338 (406)
T ss_pred             cccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEe
Confidence                                0  01488999999999999999876666788899999999999999873     58887


Q ss_pred             cCCC---CCeEEEEEecCCCcchHHHHHHHhhcCceeccCc--ccchhh
Q psy10669        245 TGGT---DVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT--GISLAA  288 (337)
Q Consensus       245 ~~~t---~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~--girig~  288 (337)
                      +...   ..+++.+.+.   .++.++.+.|.+.||.+....  .|||+.
T Consensus       339 ~~~~~~~r~~~v~~~~~---~~~~~~~~~L~~~gi~v~~~~~~~iRiS~  384 (406)
T TIGR01814       339 TPRDHAQRGCQLSLTHP---VPGKAVFQALIKRGVIGDKREPSVIRVAP  384 (406)
T ss_pred             CCCChhhcCCeEEEEec---CCHHHHHHHHHHCCEEEeccCCCeEEEec
Confidence            6311   1335555443   367888899998899986432  689886

This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.

>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily

Probab=99.47  E-value=1e-11  Score=121.55  Aligned_cols=237  Identities=12%  Similarity=0.082  Sum_probs=153.6

Q ss_pred             eeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHH
Q psy10669         35 LIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVC  113 (337)
Q Consensus        35 l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~  113 (337)
                      ..++-..+|+.|++++...+.. +. .++++. |.......++...+++.+++++|++++    +|.+++| +.++..++
T Consensus        22 ~~~~~~~~p~~v~~a~~~~~~~-~~-~~~~~~-~~~~~~~~~~~~~l~~~ia~~~~~~~~----~v~~~~~~t~~l~~~~   94 (397)
T TIGR01976        22 DNPAGTQIPQSVADAVSAALTR-SN-ANRGGA-YESSRRADQVVDDAREAVADLLNADPP----EVVFGANATSLTFLLS   94 (397)
T ss_pred             cCCccCCCCHHHHHHHHHHHHh-cC-CCCCCC-chHHHHHHHHHHHHHHHHHHHcCCCCC----eEEEeCCHHHHHHHHH
Confidence            4466666799999999876543 22 233332 222222333444556789999999763    5777777 55654444


Q ss_pred             Hhh---CCc-----------------------------------c---------c--c---cccEEEEc-Ccc-cccccC
Q psy10669        114 EKA---LPT-----------------------------------N---------N--A---RFDFLSSG-TTC-YSRCLD  139 (337)
Q Consensus       114 ~aL---l~~-----------------------------------~---------~--a---~pklII~~-~S~-~~~~~d  139 (337)
                      .++   +++                                   .         +  +   ++++|++. .++ .+...|
T Consensus        95 ~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~  174 (397)
T TIGR01976        95 RAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEATGELHPDDLASLLSPRTRLVAVTAASNTLGSIVD  174 (397)
T ss_pred             HHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEeccccCCCcCHHHHHHhcCCCceEEEEeCCCCCCCccCC
Confidence            443   322                                   0         0  0   15777765 322 468889


Q ss_pred             hHHHHHHhhhcCCeEEEeccccccccc---------eeeeec-c----CCchhhh--hHHHHHhhccCC---------CC
Q psy10669        140 YARFRQICDETDSIMFADMSHISGLIA---------GVKGVT-K----TGEKILY--DYEEKINNAVFP---------SL  194 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T~-~----~Gg~i~~--~l~~~i~~~~~p---------~~  194 (337)
                      +++|.++|+++|+++++|++|..|...         .++++. |    ..|+++.  ++.+.+.+...+         ..
T Consensus       175 ~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~  254 (397)
T TIGR01976       175 LAAITELVHAAGALVVVDAVHYAPHGLIDVQATGADFLTCSAYKFFGPHMGILWGRPELLMNLPPYKLTFSYDTGPERFE  254 (397)
T ss_pred             HHHHHHHHHHcCCEEEEehhhhccccCCCHHHcCCCEEEEechhhcCCceEEEEEcHHHHhhCCCccccCccCCCcchhc
Confidence            999999999999999999999887543         123333 2    3455543  455544432111         12


Q ss_pred             CCCCcHHHHHHHHHHHHHHhchh--------------hHHHHHHHHHHHHHHHHHHHhCC-CEEecC---CCCCeEEEEE
Q psy10669        195 QGGPHNHAIGAIATAMLQAQSDE--------------FKSYQAQVKANASHLSDEMIKRG-YHVVTG---GTDVHLILID  256 (337)
Q Consensus       195 ~g~~~~~~iaala~a~~e~~~~~--------------~~~y~~~v~~na~~l~~~L~~~G-~~v~~~---~t~~h~v~V~  256 (337)
                      .||++.+.++++..++..+.+.+              .+..++++.+++++|.+.|.+.+ +++++.   ...++++.+.
T Consensus       255 ~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~  334 (397)
T TIGR01976       255 LGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVTLYGVARLAARVPTVSFT  334 (397)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccCCCceEEEE
Confidence            58899999999999998875432              34556677778888888888864 888763   2356777666


Q ss_pred             ecCCCcchHHHHHHHhhcCceecc
Q psy10669        257 LRKNKLTGSKVELVLEEIAIACNK  280 (337)
Q Consensus       257 ~~~~~~~~~~~~~~L~~~gI~v~~  280 (337)
                      +.  +.++.++.++|++.||.+..
T Consensus       335 ~~--~~~~~~l~~~L~~~gI~v~~  356 (397)
T TIGR01976       335 VH--GLPPQRVVRRLADQGIDAWA  356 (397)
T ss_pred             eC--CcCHHHHHHHHHHCCeEEEe
Confidence            54  44678889999999999875

This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.

>TIGR02006 IscS cysteine desulfurase IscS

Probab=99.45  E-value=5.8e-12  Score=124.09  Aligned_cols=232  Identities=16%  Similarity=0.120  Sum_probs=150.5

Q ss_pred             eccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHH
Q psy10669         36 IASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCE  114 (337)
Q Consensus        36 ~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~  114 (337)
                      .++.-.+++.|++++...+...  .++++++.+.......+....+++.+++++|+++.    .|.|++| |.++..++.
T Consensus         9 ~aa~~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~----~v~~~~g~t~a~~~~l~   82 (402)
T TIGR02006         9 YAATTPVDPRVAEKMMPYLTEK--FGNPASRSHSFGWEAEEAVENARNQVAELIGADSR----EIVFTSGATESNNLAIK   82 (402)
T ss_pred             CCcCCCCCHHHHHHHHHHHHhc--CCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC----eEEEeCCHHHHHHHHHH
Confidence            3455577999999998765444  36666554433333344555677899999999762    5777777 678766666


Q ss_pred             hhC----Cc---------------------------------------------ccc--cccEEEEcCcc--cccccChH
Q psy10669        115 KAL----PT---------------------------------------------NNA--RFDFLSSGTTC--YSRCLDYA  141 (337)
Q Consensus       115 aLl----~~---------------------------------------------~~a--~pklII~~~S~--~~~~~d~~  141 (337)
                      ++.    ++                                             +..  ++++|++....  .+...|++
T Consensus        83 ~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~lv~v~~~~n~tG~~~~~~  162 (402)
T TIGR02006        83 GIAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPKSNGLIDLEELKAAIRDDTILVSIMHVNNEIGVIQDIA  162 (402)
T ss_pred             HHHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhcCCCCEEEEEECCCcCceecccHH
Confidence            652    22                                             000  26777766333  46889999


Q ss_pred             HHHHHhhhcCCeEEEeccccccccc------e---ee-eecc----CC--chhhh-hHHHHHhhccCC------CCCCCC
Q psy10669        142 RFRQICDETDSIMFADMSHISGLIA------G---VK-GVTK----TG--EKILY-DYEEKINNAVFP------SLQGGP  198 (337)
Q Consensus       142 ~l~eia~~~ga~l~vD~AH~~Gli~------g---~~-~T~~----~G--g~i~~-~l~~~i~~~~~p------~~~g~~  198 (337)
                      +|.++|+++|++++||++|++|.+.      +   ++ +.+|    .|  ++++. +....+.+....      ...||+
T Consensus       163 ~I~~l~~~~g~~livD~a~a~g~~~~~~~~~~~D~~~~s~~K~~gp~G~G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt~  242 (402)
T TIGR02006       163 AIGEICRERKVFFHVDAAQSVGKIPINVNELKVDLMSISGHKIYGPKGIGALYVRRKPRVRLEALIHGGGHERGMRSGTL  242 (402)
T ss_pred             HHHHHHHHcCCEEEEEcchhcCCcccCccccCCCEEEEehhhhcCCCceEEEEEccCCCCCCCceecCCCccCCccCCCc
Confidence            9999999999999999999999876      1   22 2222    23  33333 222222322111      225899


Q ss_pred             cHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-CCCEEecCC--CCCeEEEEEecCCCcchHHHHHHHhhcC
Q psy10669        199 HNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-RGYHVVTGG--TDVHLILIDLRKNKLTGSKVELVLEEIA  275 (337)
Q Consensus       199 ~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~G~~v~~~~--t~~h~v~V~~~~~~~~~~~~~~~L~~~g  275 (337)
                      +.+.++++..++..+. ...+...++..+..++|.+.|.+ .|+.+.+..  ...|+..+.+.  +.++..+...|.  +
T Consensus       243 ~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p~~~~v~f~--~~~~~~~~~~l~--~  317 (402)
T TIGR02006       243 PTHQIVGMGEAFRIAK-EEMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRVPGNLNVSFN--YVEGESLIMALK--D  317 (402)
T ss_pred             cHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEEe--CcCHHHHHHhcC--C
Confidence            9999999999998875 46677788888999999999887 577776521  12344455555  345566655553  5


Q ss_pred             cee
Q psy10669        276 IAC  278 (337)
Q Consensus       276 I~v  278 (337)
                      |.+
T Consensus       318 i~v  320 (402)
T TIGR02006       318 LAV  320 (402)
T ss_pred             EEE
Confidence            543

This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.

>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase

Probab=99.44  E-value=1.4e-11  Score=119.46  Aligned_cols=235  Identities=12%  Similarity=0.109  Sum_probs=148.8

Q ss_pred             ccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCcc------chHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhH
Q psy10669         37 ASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGN------QFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPAN  109 (337)
Q Consensus        37 asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~------~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN  109 (337)
                      -+--++.|.+++++..     |+.|+.+++...|.      ..+.+++    +.+++++|.+      ++.+++| +.++
T Consensus         8 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~la~~~g~~------~i~~~~g~t~al   72 (361)
T cd06452           8 QRGGRLTPEARKALIE-----WGDGYSVCDFCRGRLDEIEKPPIKDFH----HDLAEFLGMD------EARVTPGAREGK   72 (361)
T ss_pred             hcCCCCCHHHHHHHHH-----HhcccCCccccccccccccCchHHHHH----HHHHHHcCCc------eEEEeCCHHHHH
Confidence            3556788999998864     44555555543332      2234444    6889999995      3556565 6798


Q ss_pred             HHHHHhhCCc--------------------------------c-------------cc--------cccEEEEcCcc--c
Q psy10669        110 FAVCEKALPT--------------------------------N-------------NA--------RFDFLSSGTTC--Y  134 (337)
Q Consensus       110 ~~v~~aLl~~--------------------------------~-------------~a--------~pklII~~~S~--~  134 (337)
                      ..++.+++++                                .             +.        ++++|+++..+  +
T Consensus        73 ~~~l~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~t  152 (361)
T cd06452          73 FAVMHSLCEKGDWVVVDGLAHYTSYVAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNY  152 (361)
T ss_pred             HHHHHHhcCCCCEEEEcCCcchHHHHHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCC
Confidence            8888888654                                0             01        24677776332  5


Q ss_pred             ccccChHHHHHHhhhcCCeEEEeccccccccc---------eeeeec-c------CCchhhh--hHHHHHhhccCC----
Q psy10669        135 SRCLDYARFRQICDETDSIMFADMSHISGLIA---------GVKGVT-K------TGEKILY--DYEEKINNAVFP----  192 (337)
Q Consensus       135 ~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T~-~------~Gg~i~~--~l~~~i~~~~~p----  192 (337)
                      +...|+++|.++|+++|+++++|+||..|.+.         .++++. |      .+|+++.  ++.+++.....|    
T Consensus       153 G~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~~~~~~G~l~~~~~~~~~l~~~~~~~~~~  232 (361)
T cd06452         153 GNLHDAKKIAKVCHEYGVPLLLNGAYTVGRMPVSGKELGADFIVGSGHKSMAASAPIGVLATTEEWADIVFRTSQMFKIK  232 (361)
T ss_pred             eeeccHHHHHHHHHHcCCeEEEECCcccCCcCCCHHHcCCCEEEecCCccccCCCCeEEEEECHHHHHHHhccccccccc
Confidence            67889999999999999999999999988764         133333 3      2366654  465555432211    


Q ss_pred             ---CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecC-CCCCeEEEEEecC-------C
Q psy10669        193 ---SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTG-GTDVHLILIDLRK-------N  260 (337)
Q Consensus       193 ---~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~-~t~~h~v~V~~~~-------~  260 (337)
                         ...+++....++++..++.++.  +.-+...+..+++++|++.|.+. |++++.. .+.+.++.++...       .
T Consensus       233 ~~~~~~~~~~~~~~~~~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~l~g~~v~~~~~~~~n~~~~~~~~~~~~~~~~  310 (361)
T cd06452         233 EVELLGCTLRGAPLVTLMASFPHVK--ERVKRWDEEVEKARWFVAELEKIEGIKQLGEKPKNHDLMFFETPSFDEIAKKH  310 (361)
T ss_pred             eeeeeccccCchHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCeEEECCCCCCCceEEEEcCCcchhhhhc
Confidence               1234555556666666665543  22334455567889999999997 9999742 2455677666541       1


Q ss_pred             CcchHHHHHHHhhcCceeccCc---ccchhh
Q psy10669        261 KLTGSKVELVLEEIAIACNKNT---GISLAA  288 (337)
Q Consensus       261 ~~~~~~~~~~L~~~gI~v~~~~---girig~  288 (337)
                      ...+.++.+.|.+.||.+..-.   -+||++
T Consensus       311 ~~~~~~~~~~L~~~gI~~~~~~~~~~~ri~~  341 (361)
T cd06452         311 KRRGYFLYSELKKRGIHGIKPGLTRYFKLST  341 (361)
T ss_pred             cccchhHHHHHHHcCceEEcCCCceEEEEEe
Confidence            2234578888988899964211   456553

This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.

>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA

Probab=99.43  E-value=2e-11  Score=118.42  Aligned_cols=233  Identities=15%  Similarity=0.172  Sum_probs=151.6

Q ss_pred             CCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhC---
Q psy10669         41 FTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL---  117 (337)
Q Consensus        41 ~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl---  117 (337)
                      ...|.+.+++...+. .+ .|+++  .|.|.   .+++..+++.+++++|++++   ..+.+.+|+.+|..++.++.   
T Consensus        31 ~~~~~~~~a~~~~~~-~~-~~~~~--~~~~~---~~~~~~~~~~la~~~g~~~~---~~~~~~g~~~~~~~~~~~~~~~~  100 (373)
T TIGR03812        31 NPHPIAVKAYDMFIE-TN-LGDPG--LFPGT---KKIEEEVVGSLGNLLHLPDA---YGYIVSGGTEANIQAVRAAKNLA  100 (373)
T ss_pred             CchHHHHHHHHHHhh-cC-CCCcc--cCccH---HHHHHHHHHHHHHHhCCCCC---CeEEeccHHHHHHHHHHHHHHHH
Confidence            467777787765432 22 35543  34553   34556667899999999763   12455666888876655542   


Q ss_pred             ---Cc---------------------------------------cc--c---cc-cEEEEcC-cccccccChHHHHHHhh
Q psy10669        118 ---PT---------------------------------------NN--A---RF-DFLSSGT-TCYSRCLDYARFRQICD  148 (337)
Q Consensus       118 ---~~---------------------------------------~~--a---~p-klII~~~-S~~~~~~d~~~l~eia~  148 (337)
                         ++                                       .+  +   ++ .++++.+ +..+...|+++|.++|+
T Consensus       101 ~~~~~g~~vl~~~~~h~~~~~~~~~~G~~~~~v~~~~~~~~d~~~l~~~l~~~~~~vv~~~~~~~tG~~~~~~~i~~l~~  180 (373)
T TIGR03812       101 REEKRTPNIIVPESAHFSFEKAAEMLGLELRYAPLDEDYTVDVKDVEDLIDDNTIGIVGIAGTTELGQIDDIEELSKIAL  180 (373)
T ss_pred             hccCCCcEEEECCcchHHHHHHHHHcCCeEEEEeeCCCCCcCHHHHHHHHhhCcEEEEEECCCCCCCccCCHHHHHHHHH
Confidence               11                                       00  0   13 3444432 33568889999999999


Q ss_pred             hcCCeEEEeccccccccc----------------ee---ee-ecc-------CCchhhh--hHHHHHhhccCCCC-----
Q psy10669        149 ETDSIMFADMSHISGLIA----------------GV---KG-VTK-------TGEKILY--DYEEKINNAVFPSL-----  194 (337)
Q Consensus       149 ~~ga~l~vD~AH~~Gli~----------------g~---~~-T~~-------~Gg~i~~--~l~~~i~~~~~p~~-----  194 (337)
                      ++|++++||+||+.|.++                ++   ++ ++|       .|++++.  ++.+.++.. .|.+     
T Consensus       181 ~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~~~~~G~~~~~~~~~~~~l~~~-~~~~~~~~~  259 (373)
T TIGR03812       181 ENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLSPIPAGGILFRSKSYLKYLSVD-APYLTVKKQ  259 (373)
T ss_pred             HcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCCCcCCceEEEEeCHHHHhhhccc-CcccCCCCC
Confidence            999999999999865431                11   11 222       1345543  455544321 2322     


Q ss_pred             ---CCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHH
Q psy10669        195 ---QGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVL  271 (337)
Q Consensus       195 ---~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L  271 (337)
                         .|+++.+.++++..++..+.+..+++.++++.+++++|++.|++.|+..+.. ..++++.+.+.    +..++.+.|
T Consensus       260 ~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~v~~~~~----~~~~v~~~L  334 (373)
T TIGR03812       260 ATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKKIGFEPVIE-PVLNIVAFEVD----DPEEVRKKL  334 (373)
T ss_pred             cceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEcC-CCceEEEEEeC----CHHHHHHHH
Confidence               2577788899999998887656668889999999999999999999875432 45666665543    245788888


Q ss_pred             hhcCceeccCc---ccchhhh
Q psy10669        272 EEIAIACNKNT---GISLAAE  289 (337)
Q Consensus       272 ~~~gI~v~~~~---girig~~  289 (337)
                      .+.||.+....   .|||+..
T Consensus       335 ~~~gi~v~~~~~~~~iRis~~  355 (373)
T TIGR03812       335 RDRGWYVSVTRCPKALRIVVM  355 (373)
T ss_pred             HHCCceeccCCCCCEEEEEEE
Confidence            88899997643   6888654

Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.

>PLN02409 serine--glyoxylate aminotransaminase

Probab=99.43  E-value=3.4e-11  Score=118.81  Aligned_cols=243  Identities=11%  Similarity=0.082  Sum_probs=166.7

Q ss_pred             ceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHH
Q psy10669         32 GIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFA  111 (337)
Q Consensus        32 ~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~  111 (337)
                      .+.+.|---.+++.|++++...+.+ |       |    .....++-..++++++++||++..+  ..+...|||.++.+
T Consensus        10 ~~l~~pGP~~~~~~V~~a~~~~~~~-~-------~----~~~~~~~~~~~~~~l~~~~g~~~~~--~vi~~~~gt~a~~~   75 (401)
T PLN02409         10 NHLFVPGPVNIPERVLRAMNRPNED-H-------R----SPAFPALTKELLEDVKYIFKTKSGT--PFIFPTTGTGAWES   75 (401)
T ss_pred             ceeccCCCCCCCHHHHHHhcCCCCC-C-------C----CHHHHHHHHHHHHHHHHHhCCCCCC--EEEEeCCcHHHHHH
Confidence            3566777777899999999754221 1       1    1223445556778999999997421  34666677889888


Q ss_pred             HHHhhCCc-------------------------------------------c--c-c----cccEEEEcCc--ccccccC
Q psy10669        112 VCEKALPT-------------------------------------------N--N-A----RFDFLSSGTT--CYSRCLD  139 (337)
Q Consensus       112 v~~aLl~~-------------------------------------------~--~-a----~pklII~~~S--~~~~~~d  139 (337)
                      ++..++++                                           +  + .    ++|+|++.+.  ..+...|
T Consensus        76 a~~~~~~~Gd~Vlv~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~  155 (401)
T PLN02409         76 ALTNTLSPGDKVVSFRIGQFSLLWIDQMQRLNFDVDVVESPWGQGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTND  155 (401)
T ss_pred             HHHhcCCCCCEEEEeCCCchhHHHHHHHHHcCCceEEEECCCCCCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCC
Confidence            88888654                                           0  0 1    3578888743  4579999


Q ss_pred             hHHHHHH--hhhcCCeEEEeccccccccc------e---e-eeecc-----CC-chhhh--hHHHHHhhcc-CC---C--
Q psy10669        140 YARFRQI--CDETDSIMFADMSHISGLIA------G---V-KGVTK-----TG-EKILY--DYEEKINNAV-FP---S--  193 (337)
Q Consensus       140 ~~~l~ei--a~~~ga~l~vD~AH~~Gli~------g---~-~~T~~-----~G-g~i~~--~l~~~i~~~~-~p---~--  193 (337)
                      +++|.++  |+++|++++||++|++|.+.      +   + .+.+|     .| |++..  ++.+++.+.- .|   +  
T Consensus       156 ~~~i~~l~~~~~~g~~~vvD~v~s~g~~~id~~~~~~D~~~~s~~K~l~~P~G~G~l~~~~~~~~~~~~~~~~~~~~~~~  235 (401)
T PLN02409        156 LAGVRKLLDCAQHPALLLVDGVSSIGALDFRMDEWGVDVALTGSQKALSLPTGLGIVCASPKALEASKTAKSPRVFFDWA  235 (401)
T ss_pred             HHHHHHHHhhhccCcEEEEEcccccCCccccccccCccEEEEcCccccCcCCCcceeEECHHHHHHHhcCCCCCeecCHH
Confidence            9999999  99999999999999998886      1   2 23333     33 55543  4544443210 11   1  


Q ss_pred             ----------C-CCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCC--C-eEEEEEecC
Q psy10669        194 ----------L-QGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTD--V-HLILIDLRK  259 (337)
Q Consensus       194 ----------~-~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~--~-h~v~V~~~~  259 (337)
                                . .+||+.+.+.++..++..+.+...+..+++..++++++.+.|.+.|+++++....  + .++.+.+ .
T Consensus       236 ~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~g~~~~~~~~~~~s~~v~~~~~-p  314 (401)
T PLN02409        236 DYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAWGLKLCTKKPEWRSDTVTAVVV-P  314 (401)
T ss_pred             HHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCChhhcccceEEEeC-C
Confidence                      1 3489999999999999998766678889999999999999999999998863111  2 2333333 3


Q ss_pred             CCcchHHHHHHH-hhcCceeccC------cccchhhh
Q psy10669        260 NKLTGSKVELVL-EEIAIACNKN------TGISLAAE  289 (337)
Q Consensus       260 ~~~~~~~~~~~L-~~~gI~v~~~------~girig~~  289 (337)
                      .++++.++.+.| +++||.+..-      ..||||.-
T Consensus       315 ~~~~~~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~  351 (401)
T PLN02409        315 EGIDSAEIVKNAWKKYNLSLGLGLNKVAGKVFRIGHL  351 (401)
T ss_pred             CCCCHHHHHHHHHHhCCEEEEcCCCcccCCEEEEcCC
Confidence            466777776665 5689998732      27898743

>PRK15029 arginine decarboxylase; Provisional

Probab=99.42  E-value=4.2e-12  Score=132.99  Aligned_cols=202  Identities=13%  Similarity=0.080  Sum_probs=148.7

Q ss_pred             HHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHhhCCc-----------------------------------
Q psy10669         76 EIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEKALPT-----------------------------------  119 (337)
Q Consensus        76 ~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~aLl~~-----------------------------------  119 (337)
                      .+...++++++++||++.     .....+| |.+|.+++.+++++                                   
T Consensus       205 G~I~eAq~~aA~~fgA~~-----t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl~P~~~~~  279 (755)
T PRK15029        205 GAFGESEKYAARVFGADR-----SWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLILTGAKPVYMVPSRNRY  279 (755)
T ss_pred             cHHHHHHHHHHHHhCCCc-----EEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEeccccccc
Confidence            345667889999999997     4555677 56799999999765                                   


Q ss_pred             ------------------cccc-c--c---------EEEEcCcccccccChHHHHHHhhhcCCeEEEeccccc-------
Q psy10669        120 ------------------NNAR-F--D---------FLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHIS-------  162 (337)
Q Consensus       120 ------------------~~a~-p--k---------lII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~-------  162 (337)
                                        .+++ |  |         +|++.++.|+...|++.|.++|+++|.+|+||+||++       
T Consensus       280 Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~~  359 (755)
T PRK15029        280 GIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPI  359 (755)
T ss_pred             CCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCCcceeeCHHHHHHHHHhcCCeEEEECccccccccCcc
Confidence                              0001 2  2         5555588889999999999999999999999999976       


Q ss_pred             -----cc-------cc----eeeeeccC------Cchhhh--h---H-HHHHhhccCCCCCCCCcHHHHHHHHHHHHHHh
Q psy10669        163 -----GL-------IA----GVKGVTKT------GEKILY--D---Y-EEKINNAVFPSLQGGPHNHAIGAIATAMLQAQ  214 (337)
Q Consensus       163 -----Gl-------i~----g~~~T~~~------Gg~i~~--~---l-~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~  214 (337)
                           .+       .+    .+.||||.      ++++-.  +   + .++++.+..-..+++|+.+.+|++.+|..++.
T Consensus       360 ~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~~~~id~~r~~~~l~~~qSTSPSY~LmASLD~ar~~m~  439 (755)
T PRK15029        360 YADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQAYMMHATTSPLYAICASNDVAVSMMD  439 (755)
T ss_pred             ccccccccccccccCCCceEEEEchhhcccchhhhhhheeCCCccccCHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHh
Confidence                 22       11    24588863      333321  2   1 24677665445578999999999999999885


Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHhC-C------------------------------------------CEEecC-----
Q psy10669        215 SDEFKSYQAQVKANASHLSDEMIKR-G------------------------------------------YHVVTG-----  246 (337)
Q Consensus       215 ~~~~~~y~~~v~~na~~l~~~L~~~-G------------------------------------------~~v~~~-----  246 (337)
                      .+.+++..++.++.+..|++.+.+. |                                          +.+.+.     
T Consensus       440 ~~~G~~l~~~~i~~~~~~r~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  519 (755)
T PRK15029        440 GNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQDCWVMHPGESWH  519 (755)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHhccccccccccccccccCccccccccccccccccccchhhhccccceeeeccccccc
Confidence            4467888999999999999999763 3                                          233311     


Q ss_pred             ----------CCCCeEEEEEecCCCcchH---------HHHHHHhhcCceeccCc
Q psy10669        247 ----------GTDVHLILIDLRKNKLTGS---------KVELVLEEIAIACNKNT  282 (337)
Q Consensus       247 ----------~t~~h~v~V~~~~~~~~~~---------~~~~~L~~~gI~v~~~~  282 (337)
                                ..|.--+.|+++..+.+|.         ++.++|+++||.+.+..
T Consensus       520 g~~~~~~~~~~lDp~Klti~~~~~g~sG~~~~~gip~~~l~~~L~~~gI~~E~~~  574 (755)
T PRK15029        520 GFKDLPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTRTT  574 (755)
T ss_pred             CcccccccccccCCceEEEEcCCCCCCCcccccCCcHHHHHHHHHHcCCEEEecC
Confidence                      1245567787767677777         89999999999999866

>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type

Probab=99.42  E-value=2.9e-11  Score=118.07  Aligned_cols=235  Identities=17%  Similarity=0.152  Sum_probs=152.3

Q ss_pred             ccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHh
Q psy10669         37 ASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEK  115 (337)
Q Consensus        37 asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~a  115 (337)
                      ++...+++.|++++...+.+.|  ++|++.+..+....+.++ .+++++++.+|+..+   -+|.+++| +.++..++.+
T Consensus         6 aa~~~~~~~v~~~~~~~~~~~~--~n~~~~~~~~~~~~~~l~-~a~~~~~~~~~~~~~---~~i~~t~g~teal~~~~~~   79 (382)
T TIGR03403         6 NATTMLDPKVKELMDPFFCDIY--GNPNSLHQFGTATHPAIA-EALDKLYKGINARDL---DDIIITSCATESNNWVLKG   79 (382)
T ss_pred             cCCCCCCHHHHHHHHHHHHhcC--cCCccccHHHHHHHHHHH-HHHHHHHHHcCcCCC---CeEEEeCCHHHHHHHHHHH
Confidence            4556779999999987655544  566654433433334454 345567778887322   26888777 5676655565


Q ss_pred             hC-----Cc-------------------------------------------cc--c---cccEEEEcC-cc-cccccCh
Q psy10669        116 AL-----PT-------------------------------------------NN--A---RFDFLSSGT-TC-YSRCLDY  140 (337)
Q Consensus       116 Ll-----~~-------------------------------------------~~--a---~pklII~~~-S~-~~~~~d~  140 (337)
                      +.     ++                                           .+  +   +++++++.. ++ .+...|+
T Consensus        80 ~~~~~~~~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~~  159 (382)
T TIGR03403        80 VYFDEILKGGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPINEQGTITAEQVREAITEKTALVSVMWANNETGMIFPI  159 (382)
T ss_pred             HHHhhcccCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCCCCCCCHHHHHHhcccCCeEEEEEcccCCCccccCH
Confidence            41     11                                           00  1   257777753 33 4688999


Q ss_pred             HHHHHHhhhcCCeEEEeccccccccc---------eee-eecc----CC-chh-hh-hH--HHHHh--hccCCCCCCCCc
Q psy10669        141 ARFRQICDETDSIMFADMSHISGLIA---------GVK-GVTK----TG-EKI-LY-DY--EEKIN--NAVFPSLQGGPH  199 (337)
Q Consensus       141 ~~l~eia~~~ga~l~vD~AH~~Gli~---------g~~-~T~~----~G-g~i-~~-~l--~~~i~--~~~~p~~~g~~~  199 (337)
                      ++|.++|+++|+++++|++|..|.+.         .++ +.+|    .| |++ +. ++  .+.+.  ........|+++
T Consensus       160 ~~I~~la~~~g~~~ivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~gp~G~g~l~vr~~~~~~p~~~g~~~~~~~~~gt~~  239 (382)
T TIGR03403       160 KEIGEICKERGVLFHTDAVQAIGKIPVDVQKAGVDFLSFSAHKFHGPKGVGGLYIRKGVELTPLFHGGEHMGGRRSGTLN  239 (382)
T ss_pred             HHHHHHHHHcCCEEEEechhhcCCCccCccccCCCEEEEcchhhCCCCceEEEEECCCCCCCCcccCCCCCCCcccCCcC
Confidence            99999999999999999999999775         122 3333    33 333 22 22  11110  001112358999


Q ss_pred             HHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-CCCEEecCCC--CCeEEEEEecCCCcchHHHHHHHhhcCc
Q psy10669        200 NHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-RGYHVVTGGT--DVHLILIDLRKNKLTGSKVELVLEEIAI  276 (337)
Q Consensus       200 ~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~G~~v~~~~t--~~h~v~V~~~~~~~~~~~~~~~L~~~gI  276 (337)
                      .+.+++++.+++.+.+ ..+...+++.+..++|.+.|.+ .|++++++..  .++++.+.+  .++++..+...|++.||
T Consensus       240 ~~~~~al~~al~~~~~-~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~L~~~gI  316 (382)
T TIGR03403       240 VPYIVAMGEAMRLANE-YLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNTILISI--KGVEGEAMLWDLNKAGI  316 (382)
T ss_pred             hHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCCEEEEEe--CCCCHHHHHHhhccCCE
Confidence            9999999999987643 4566678888888899998877 6888886321  134555555  45678888888998999


Q ss_pred             eecc
Q psy10669        277 ACNK  280 (337)
Q Consensus       277 ~v~~  280 (337)
                      .+..
T Consensus       317 ~v~~  320 (382)
T TIGR03403       317 AAST  320 (382)
T ss_pred             EEEc
Confidence            9984

Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.

>cd06502 TA_like Low-specificity threonine aldolase (TA)

Probab=99.41  E-value=6.7e-12  Score=119.81  Aligned_cols=234  Identities=15%  Similarity=0.125  Sum_probs=138.4

Q ss_pred             eccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHH
Q psy10669         36 IASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVC  113 (337)
Q Consensus        36 ~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~  113 (337)
                      ++|||+.  +|.|++++..... .    .   ..|.......+++    +.+++++| +.    ..+.+.+|+.||..++
T Consensus         2 ~~~~~~~~~~~~v~~a~~~~~~-~----~---~~~~~~~~~~~l~----~~~a~~~g-~~----~~~~~~~gt~a~~~~~   64 (338)
T cd06502           2 FRSDTVTGPTPEMLEAMAAANV-G----D---DVYGEDPTTAKLE----ARAAELFG-KE----AALFVPSGTAANQLAL   64 (338)
T ss_pred             cccccCCCCCHHHHHHHHhccc-C----C---cccCCCHHHHHHH----HHHHHHhC-CC----eEEEecCchHHHHHHH
Confidence            5799998  8999999975422 1    1   1222233445665    57789999 33    2577788899999988


Q ss_pred             HhhCCc--------------------------------------------cc-c--------cccEEEEc-Cccccc---
Q psy10669        114 EKALPT--------------------------------------------NN-A--------RFDFLSSG-TTCYSR---  136 (337)
Q Consensus       114 ~aLl~~--------------------------------------------~~-a--------~pklII~~-~S~~~~---  136 (337)
                      .+++++                                            +. .        +|++|++. +++.+.   
T Consensus        65 ~~l~~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~g~~~~  144 (338)
T cd06502          65 AAHTQPGGSVICHETAHIYTDEAGAPEFLSGVKLLPVPGENGKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEGGTVYP  144 (338)
T ss_pred             HHhcCCCCeEEEecCcceeeecCCcHHHHcCceEEeecCCCCcCCHHHHHHHhhccCCCcCCcceEEEEEeecCCccccC
Confidence            988654                                            00 0        25666665 433333   


Q ss_pred             ccChHHHHHHhhhcCCeEEEeccccccccc--------------eeeeec-c-----CCchhhh--hHHHHHhhccCCCC
Q psy10669        137 CLDYARFRQICDETDSIMFADMSHISGLIA--------------GVKGVT-K-----TGEKILY--DYEEKINNAVFPSL  194 (337)
Q Consensus       137 ~~d~~~l~eia~~~ga~l~vD~AH~~Gli~--------------g~~~T~-~-----~Gg~i~~--~l~~~i~~~~~p~~  194 (337)
                      ..|+++|.++|+++|+++++|+||..+...              .++.|. |     .|++++.  ++.+.+++...+ .
T Consensus       145 ~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~g~~~~~~~~~~~~~~~~~~~-~  223 (338)
T cd06502         145 LDELKAISALAKENGLPLHLDGARLANAAAALGVALKTYKSGVDSVSFCLSKGGGAPVGAVVVGNRDFIARARRRRKQ-A  223 (338)
T ss_pred             HHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCCCHHHHHhcCCEEEEeccccCCCccceEEECCHHHHHHHHHHHHH-h
Confidence            234566778899999999999998543211              123333 2     2444443  566666543221 1


Q ss_pred             CCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHh--
Q psy10669        195 QGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLE--  272 (337)
Q Consensus       195 ~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~--  272 (337)
                      .++...+.+++.+ +...+....+.++.+++.+++++|.+.|.+.|+++..  +.+++++|.+.........+.+.+.  
T Consensus       224 ~~~~~~~~~~~~a-~~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~l~~~  300 (338)
T cd06502         224 GGGMRQSGFLAAA-GLAALENDLWLRRLRHDHEMARRLAEALEELGGLESE--VQTNIVLLDPVEANAVFVELSKEAIER  300 (338)
T ss_pred             CCChhhHHHHHHH-HHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCCCccc--ccCCeEEEecCCccHHHHHHHHHHHHh
Confidence            1233333332211 1222222346678899999999999999999986644  6777887776432212222222222  


Q ss_pred             -hcCceeccC--cccchhhhh
Q psy10669        273 -EIAIACNKN--TGISLAAEI  290 (337)
Q Consensus       273 -~~gI~v~~~--~girig~~~  290 (337)
                       +.||.+...  ..|||....
T Consensus       301 ~~~gi~~~~~~~~~lRi~~~~  321 (338)
T cd06502         301 RGEGVLFYAWGEGGVRFVTHW  321 (338)
T ss_pred             hhCCEEEEecCCCeEEEEeec
Confidence             458888654  267776543

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.

>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase

Probab=99.40  E-value=9.5e-12  Score=123.01  Aligned_cols=229  Identities=15%  Similarity=0.241  Sum_probs=152.7

Q ss_pred             eeccCCCC----CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHH
Q psy10669         35 LIASENFT----SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANF  110 (337)
Q Consensus        35 l~asen~~----~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~  110 (337)
                      ++.|+++.    +..+-.||...   .++.-..|.-.|.|.....++|    ++++++||.++     .|..+||+.|..
T Consensus        33 ~l~~~~v~iDLltDsgT~aMs~~---q~a~~~~GDe~yag~~s~~~lE----~~va~~~G~~~-----av~v~sGT~Al~  100 (450)
T TIGR02618        33 LLNSEDVYIDLLTDSGTNAMSDK---QWAGLMMGDEAYAGSRNFYHLE----RTVRELYGFKY-----VVPTHQGRGAEN  100 (450)
T ss_pred             cCccCceEEEcccCCCcHHHHHH---HHHHhhhcchhhcCCCcHHHHH----HHHHHHHCCCe-----EEEcCCHHHHHH
Confidence            45566554    44444444322   1222233445577888888999    57889999996     688899999933


Q ss_pred             HHHHhhCCc-----------------------------c-------------------c--c-cc------cEEEEc--C
Q psy10669        111 AVCEKALPT-----------------------------N-------------------N--A-RF------DFLSSG--T  131 (337)
Q Consensus       111 ~v~~aLl~~-----------------------------~-------------------~--a-~p------klII~~--~  131 (337)
                      .++...+++                             .                   +  + ++      ++|.+.  .
T Consensus       101 ll~~l~l~pGDeVpsn~~f~Tt~ahIe~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~  180 (450)
T TIGR02618       101 LLSQIAIKPGDYVPGNMYFTTTRYHQEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTV  180 (450)
T ss_pred             HHHHhCCCCcCEECCceeHHHHHHHHHhCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEec
Confidence            344444443                             0                   0  0 11      122222  2


Q ss_pred             ccc-ccc---cChHHHHHHhhhcCCeEEEecccccc--c-c-----c------------------eeee-ec-----cCC
Q psy10669        132 TCY-SRC---LDYARFRQICDETDSIMFADMSHISG--L-I-----A------------------GVKG-VT-----KTG  175 (337)
Q Consensus       132 S~~-~~~---~d~~~l~eia~~~ga~l~vD~AH~~G--l-i-----~------------------g~~~-T~-----~~G  175 (337)
                      -.+ +.+   -|+++++++|+++|+.|+.|+||..|  . |     +                  ++++ ++     +.|
T Consensus       181 N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~~G  260 (450)
T TIGR02618       181 NLAGGQPVSMANMREVRELCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVNIG  260 (450)
T ss_pred             ccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCCCc
Confidence            223 455   35778889999999999999999984  3 2     0                  1233 33     249


Q ss_pred             chhhh---hHHHHHhhc--cCCCC--CCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCC
Q psy10669        176 EKILY---DYEEKINNA--VFPSL--QGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGT  248 (337)
Q Consensus       176 g~i~~---~l~~~i~~~--~~p~~--~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t  248 (337)
                      |+++.   ++.++++..  +++++  .|+..-..+.|+++++.|+.+   ..|.++.++++++|++.|.+.|+.|+. .+
T Consensus       261 G~l~~~d~~l~~k~r~~~~~~eG~~tyGgla~r~~~ala~gL~e~~~---~~y~~~r~~~a~~La~~L~~~Gvpv~~-p~  336 (450)
T TIGR02618       261 GFLCMNDDEMFQSAKELVVVFEGMPSYGGLAGRDMEAMAIGIREAVD---YEYIEHRVKQVRYLGDKLKAAGVPIVE-PV  336 (450)
T ss_pred             eEEEeCCHHHHHHHHHHhhhcCCccccCchhhhhHHHHHHHHHHhhh---HHHHHHHHHHHHHHHHHHHHCCCcccC-CC
Confidence            99984   577766654  56665  455556689999999999864   388999999999999999999999974 47


Q ss_pred             CCeEEEEEecC-------CCcchHHHHHHHh-hcCceec
Q psy10669        249 DVHLILIDLRK-------NKLTGSKVELVLE-EIAIACN  279 (337)
Q Consensus       249 ~~h~v~V~~~~-------~~~~~~~~~~~L~-~~gI~v~  279 (337)
                      .+|++.||...       ..+.+..+...|. +.||..-
T Consensus       337 ggh~V~vda~~~lph~~~~~~p~~al~~~ly~~~gir~~  375 (450)
T TIGR02618       337 GGHAVFLDARRFLPHIPQDQFPAQSLAASIYVETGVRSM  375 (450)
T ss_pred             CcceEEEEhHHhCCCCChhhChHHHHHHHHHHHhCccEE
Confidence            88999999765       2445566666665 4677643

This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)

>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn)

Probab=99.39  E-value=1.6e-11  Score=117.87  Aligned_cols=195  Identities=15%  Similarity=0.115  Sum_probs=129.6

Q ss_pred             chHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhh-CCc-------------------------------
Q psy10669         72 QFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKA-LPT-------------------------------  119 (337)
Q Consensus        72 ~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aL-l~~-------------------------------  119 (337)
                      ....++|    +.++++||.+.     .+.++||+.|+..++.++ +++                               
T Consensus        18 ~~~~~~~----~~la~~~~~~~-----~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~   88 (352)
T cd00616          18 PKVREFE----KAFAEYLGVKY-----AVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATANAILLLGATPVFVDID   88 (352)
T ss_pred             HHHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHHHHcCCeEEEEecC
Confidence            3456676    57899999864     567788899988888888 333                               


Q ss_pred             c---------cc-----cccEEEEcCcccccccChHHHHHHhhhcCCeEEEeccccccccc-----------eeeeec--
Q psy10669        120 N---------NA-----RFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA-----------GVKGVT--  172 (337)
Q Consensus       120 ~---------~a-----~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----------g~~~T~--  172 (337)
                      .         +.     ++++|++.+ .++...|+++|.++|+++|+++++|++|+.|...           .+.+.+  
T Consensus        89 ~~~~~~d~~~l~~~i~~~~~~v~~~~-~~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~~~~~~~~~~~~d~~~~S~~~~  167 (352)
T cd00616          89 PDTYNIDPELIEAAITPRTKAIIPVH-LYGNPADMDAIMAIAKRHGLPVIEDAAQALGATYKGRKVGTFGDAGAFSFHPT  167 (352)
T ss_pred             CCcCCcCHHHHHHhcCcCCeEEEEEC-CCCCcCCHHHHHHHHHHcCCeEEEECCCCCCCeECCEEcccCcceeEEcCCCC
Confidence            0         00     268888764 6788999999999999999999999999988543           112222  


Q ss_pred             c-----CCchhhh---hHHHHHhhccCCCCCC-------------CCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHH
Q psy10669        173 K-----TGEKILY---DYEEKINNAVFPSLQG-------------GPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASH  231 (337)
Q Consensus       173 ~-----~Gg~i~~---~l~~~i~~~~~p~~~g-------------~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~  231 (337)
                      |     .||++++   ++.+++.....++...             ....+..++++.  ..+  ...+++.++..+|+++
T Consensus       168 K~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~--~~l--~~~~~~~~~~~~~~~~  243 (352)
T cd00616         168 KNLTTGEGGAVVTNDEELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQAAIGL--AQL--EKLDEIIARRREIAER  243 (352)
T ss_pred             CCCcccCceEEEECCHHHHHHHHHHHHcCCCCCCCccccceeeeccCcCHHHHHHHH--HHH--HhhHHHHHHHHHHHHH
Confidence            2     3676654   4555444322211110             111122222222  222  2456788899999999


Q ss_pred             HHHHHHh-CCCEEecCC----CCCeEEEEEecCC-CcchHHHHHHHhhcCceecc
Q psy10669        232 LSDEMIK-RGYHVVTGG----TDVHLILIDLRKN-KLTGSKVELVLEEIAIACNK  280 (337)
Q Consensus       232 l~~~L~~-~G~~v~~~~----t~~h~v~V~~~~~-~~~~~~~~~~L~~~gI~v~~  280 (337)
                      +++.|.+ .|+++....    ...+++++.+... +.+..++.+.|.+.||.++.
T Consensus       244 ~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gI~~~~  298 (352)
T cd00616         244 YKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEAGESRDELIEALKEAGIETRV  298 (352)
T ss_pred             HHHHhcCCCCccCCCCCCCCceeeEEEEEEECCcCCCCHHHHHHHHHHCCCCeee
Confidence            9999998 589887532    2346778777542 45788999999999997764

AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein

>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional

Probab=99.37  E-value=3.1e-10  Score=110.08  Aligned_cols=240  Identities=13%  Similarity=0.084  Sum_probs=155.6

Q ss_pred             eeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCccee-ecCCCchhHHHH
Q psy10669         34 ELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNV-QPYSGSPANFAV  112 (337)
Q Consensus        34 ~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v-~~~Sgt~AN~~v  112 (337)
                      .+.|-=-.++|.|++++....      +.   +   ..++.+ +...+++.+++++|++...  ..+ ...||+.++..+
T Consensus         8 ~~~pgP~~~~~~~~~a~~~~~------~~---~---~~~~~~-~~~~~~~~l~~l~~~~~~~--~~i~~~~~gt~~l~~~   72 (368)
T PRK13479          8 LLTPGPLTTSRTVREAMLRDW------GS---W---DDDFNA-LTASVRAKLVAIATGEEGY--TCVPLQGSGTFSVEAA   72 (368)
T ss_pred             eecCCCCCCCHHHHHHhCCCC------CC---C---ChHHHH-HHHHHHHHHHHHhCCCCCc--eEEEEcCCcHHHHHHH
Confidence            355555666999999886532      11   1   122333 4445667999999986421  234 445678998888


Q ss_pred             HHhhCCc-------------------------------------------cc--c-cc--cEEEEcCc--ccccccChHH
Q psy10669        113 CEKALPT-------------------------------------------NN--A-RF--DFLSSGTT--CYSRCLDYAR  142 (337)
Q Consensus       113 ~~aLl~~-------------------------------------------~~--a-~p--klII~~~S--~~~~~~d~~~  142 (337)
                      +.++..+                                           +.  . +|  ++|.+...  ..+...|+++
T Consensus        73 ~~~l~~~~~~vlv~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~~~~  152 (368)
T PRK13479         73 IGSLVPRDGKVLVPDNGAYGARIAQIAEYLGIAHVVLDTGEDEPPDAAEVEAALAADPRITHVALVHCETTTGILNPLDE  152 (368)
T ss_pred             HHhccCCCCeEEEEeCCchHHHHHHHHHHcCCcEEEEECCCCCCCCHHHHHHHHHhCCCCcEEEEEcccCccccccCHHH
Confidence            8888643                                           00  0 13  44544432  3468899999


Q ss_pred             HHHHhhhcCCeEEEeccccccccc---------e-eeeecc-----CC-chhhh--hHHHHHhhccCC------------
Q psy10669        143 FRQICDETDSIMFADMSHISGLIA---------G-VKGVTK-----TG-EKILY--DYEEKINNAVFP------------  192 (337)
Q Consensus       143 l~eia~~~ga~l~vD~AH~~Gli~---------g-~~~T~~-----~G-g~i~~--~l~~~i~~~~~p------------  192 (337)
                      |.++|+++|++++||++|..|...         . +.+++|     .| |+++.  ++.+.+.....|            
T Consensus       153 i~~l~~~~~~~livDa~~~~g~~~~~~~~~~~d~~v~s~~K~l~g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (368)
T PRK13479        153 IAAVAKRHGKRLIVDAMSSFGAIPIDIAELGIDALISSANKCIEGVPGFGFVIARRSELEACKGNSRSLSLDLYDQWAYM  232 (368)
T ss_pred             HHHHHHHcCCEEEEEcccccCCccccccccCceEEEecCccccccCCCceEEEECHHHHHHhhcCCCCeeecHHHHHhhh
Confidence            999999999999999999998754         1 233443     24 66543  454444332111            


Q ss_pred             ----CCCCCCcHHHHHHHHHHHHHHhchh-hHHHHHHHHHHHHHHHHHHHhCCCEEecCC-CCCe-EEEEEecC-CCcch
Q psy10669        193 ----SLQGGPHNHAIGAIATAMLQAQSDE-FKSYQAQVKANASHLSDEMIKRGYHVVTGG-TDVH-LILIDLRK-NKLTG  264 (337)
Q Consensus       193 ----~~~g~~~~~~iaala~a~~e~~~~~-~~~y~~~v~~na~~l~~~L~~~G~~v~~~~-t~~h-~v~V~~~~-~~~~~  264 (337)
                          ...-+++.+.++++..++..+.+.. .++..+++.++.++|.+.|.+.|++++... ..++ ++.+.+.. .+.+.
T Consensus       233 ~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (368)
T PRK13479        233 EKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRALGFEPLLDAEIQSPIIVTFHAPADPAYDF  312 (368)
T ss_pred             cccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCcccCCchhcCceEEEEECCCCCCcCH
Confidence                1112788899999999998886543 477789999999999999999999886421 1222 23333322 22466


Q ss_pred             HHHHHHHhhcCceeccCc-----ccchhh
Q psy10669        265 SKVELVLEEIAIACNKNT-----GISLAA  288 (337)
Q Consensus       265 ~~~~~~L~~~gI~v~~~~-----girig~  288 (337)
                      .++.+.|.+.||.+.+..     .+|||.
T Consensus       313 ~~l~~~L~~~gi~v~~g~~~~~~~iRis~  341 (368)
T PRK13479        313 KEFYERLKEQGFVIYPGKLTQVDTFRIGC  341 (368)
T ss_pred             HHHHHHHHHCCEEEecCCCCCCCEEEEec
Confidence            788888988899996531     577764

>PRK02769 histidine decarboxylase; Provisional

Probab=99.37  E-value=1.6e-10  Score=113.46  Aligned_cols=243  Identities=14%  Similarity=0.111  Sum_probs=153.5

Q ss_pred             HHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCC-CcceeecCCC-chhHHHHHHhh---CCc
Q psy10669         45 AVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQ-WGCNVQPYSG-SPANFAVCEKA---LPT  119 (337)
Q Consensus        45 ~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~-~~~~v~~~Sg-t~AN~~v~~aL---l~~  119 (337)
                      ...+.+...+.+.+  |+|.+....| ....++|..+++.++++||+++.+ |   ..++|| |.+|+..+.+-   .+.
T Consensus        37 ~~~~~~~~~~~~n~--gnp~~~~~~g-~~~~~~e~~~~~~~a~l~g~~~~~~~---G~~TsGgTean~~a~~~ar~~~~~  110 (380)
T PRK02769         37 SALKRFFSFSINNC--GDPYSKSNYP-LNSFDFERDVMNFFAELFKIPFNESW---GYITNGGTEGNLYGCYLARELFPD  110 (380)
T ss_pred             HHHHHHHHhhhccC--CCccccCCCC-CChHHHHHHHHHHHHHHhCCCCCCCC---EEEecChHHHHHHHHHHHHHhCCC
Confidence            33444444444443  5665532222 234678888899999999997543 4   245555 88976443321   111


Q ss_pred             --------------------------------------cc------c--cccEEEEcCcc--cccccChHHHHHHhhhcC
Q psy10669        120 --------------------------------------NN------A--RFDFLSSGTTC--YSRCLDYARFRQICDETD  151 (337)
Q Consensus       120 --------------------------------------~~------a--~pklII~~~S~--~~~~~d~~~l~eia~~~g  151 (337)
                                                            .+      .  +|.+|+++..+  .+...|+++|.++|+++|
T Consensus       111 ~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~~~~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g  190 (380)
T PRK02769        111 GTLYYSKDTHYSVSKIARLLRIKSRVITSLPNGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDNIKEIQEILKKIG  190 (380)
T ss_pred             cEEEeCCCceehHHHHHHHcCCCCceeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhC
Confidence                                                  00      0  16777776433  579999999999999998


Q ss_pred             ---CeEEEeccccccccc------------e---e-eeecc-----CC-chhhh--hHHHHHhh------ccCCCCCCCC
Q psy10669        152 ---SIMFADMSHISGLIA------------G---V-KGVTK-----TG-EKILY--DYEEKINN------AVFPSLQGGP  198 (337)
Q Consensus       152 ---a~l~vD~AH~~Gli~------------g---~-~~T~~-----~G-g~i~~--~l~~~i~~------~~~p~~~g~~  198 (337)
                         ++++||+||+.|.+.            +   + .+.||     +| |+++.  +..+.+.+      ..-+.+.||.
T Consensus       191 ~~~~~lHVDaA~gg~~~p~~~~~~~~d~~~~vDsis~s~HK~~~~P~g~G~l~~r~~~~~~~~~~~~yl~~~d~t~~GSR  270 (380)
T PRK02769        191 IDDYYIHADAALSGMILPFVNNPPPFSFADGIDSIAISGHKFIGSPMPCGIVLAKKKYVERISVDVDYIGSRDQTISGSR  270 (380)
T ss_pred             CCceEEEEEecccceeecccCccccCCccCCCCEEEECCcccCCCCCCcEEEEEehhhhhhcccCccccCCCCCCccCCC
Confidence               699999999999884            1   1 22332     33 44432  23222211      1123457888


Q ss_pred             cHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCcee
Q psy10669        199 HNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIAC  278 (337)
Q Consensus       199 ~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v  278 (337)
                      +...++++..+++.+....+++..++..+++++|.++|++.|+++..   +.....|.++...   .++   ..+..+.+
T Consensus       271 ~g~~~l~lw~aL~~lg~~G~~~~~~~~~~la~~l~~~L~~~g~~~~~---~p~~~~v~f~~~~---~~~---~~~w~l~~  341 (380)
T PRK02769        271 NGHTALLLWAAIRSLGSKGLRQRVQHCLDMAQYAVDRLQANGIPAWR---NPNSITVVFPCPS---ERI---WKKWHLAT  341 (380)
T ss_pred             CcHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEc---CCCceEEEEcCCC---HHH---HhCeeEcc
Confidence            88899999999999887888999999999999999999999999985   3334445565433   222   23333333


Q ss_pred             ccCcccch-hhhhHhhhCCCHHHHHHHH
Q psy10669        279 NKNTGISL-AAEIQAISGPKLVDFQTCL  305 (337)
Q Consensus       279 ~~~~giri-g~~~~t~~G~~~~~~~~~~  305 (337)
                      .++ ++|| -|+.+|+..  +.+|.+++
T Consensus       342 ~~~-~~hi~~~~~~~~~~--~~~f~~dl  366 (380)
T PRK02769        342 SGN-QAHIITMPHHNKQQ--IDSLIDEL  366 (380)
T ss_pred             cCC-EEEEEECCCCCHHH--HHHHHHHH
Confidence            332 7888 567777432  24455443

>TIGR01366 serC_3 phosphoserine aminotransferase, putative

Probab=99.36  E-value=1.9e-10  Score=112.07  Aligned_cols=232  Identities=13%  Similarity=0.048  Sum_probs=152.0

Q ss_pred             eeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeec--CCCchhHHHH
Q psy10669         35 LIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQP--YSGSPANFAV  112 (337)
Q Consensus        35 l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~--~Sgt~AN~~v  112 (337)
                      ++|-=-.++|.|++++....     .+... ..+.+.+.. ++-..++++++++||++.+ |  .|.|  .|||.++.++
T Consensus         7 f~pGP~~~~~~v~~a~~~~~-----~~~~~-~~hr~~~f~-~~~~~~r~~l~~l~~~~~~-~--~v~f~~gs~T~a~~~~   76 (361)
T TIGR01366         7 FGSGPSKVRLEQLQALTTTA-----ASLFG-TSHRQAPVK-NLVGRVREGLAELFSLPDG-Y--EVILGNGGATAFWDAA   76 (361)
T ss_pred             ccCCCcCCCHHHHHHHHhcC-----ccccc-cCcCChHHH-HHHHHHHHHHHHHhCCCCC-c--eEEEECCchhHHHHHH
Confidence            44445567999999986320     01111 112233333 4445678899999998532 2  5665  3468887777


Q ss_pred             HHhhCCc--------------------------------------ccc---cccEEEEcCc--ccccccChHHHHHHhhh
Q psy10669        113 CEKALPT--------------------------------------NNA---RFDFLSSGTT--CYSRCLDYARFRQICDE  149 (337)
Q Consensus       113 ~~aLl~~--------------------------------------~~a---~pklII~~~S--~~~~~~d~~~l~eia~~  149 (337)
                      +.+++.+                                      +..   ++|+|.+++.  +.++..|+++|   +++
T Consensus        77 ~~~l~~~~~l~i~~G~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lV~~~h~et~tG~~~pi~~I---~~~  153 (361)
T TIGR01366        77 TFGLIEKKSLHLSFGEFSSKFAKAVKLAPWLGEPIIVTADPGSAPEPQADPGVDVIAWAHNETSTGVAVPVRRP---EGS  153 (361)
T ss_pred             HHhcccccccEEecCHHHHHHHHHHHhhhccCCceEEecCCCCCCCCccCCCCCEEEEcccCCccceecccccc---ccc
Confidence            7887522                                      000   2688888744  35788887665   789


Q ss_pred             cCCeEEEeccccccccc-------eeeeecc-----CCchhh---h-hHHHHHhhcc--------------------CCC
Q psy10669        150 TDSIMFADMSHISGLIA-------GVKGVTK-----TGEKIL---Y-DYEEKINNAV--------------------FPS  193 (337)
Q Consensus       150 ~ga~l~vD~AH~~Gli~-------g~~~T~~-----~Gg~i~---~-~l~~~i~~~~--------------------~p~  193 (337)
                      +|++++||++|++|.+.       .+.++.+     .||+.+   . ++.+++++..                    -++
T Consensus       154 ~g~~~iVDavqs~g~~~idv~~~D~~~~s~~K~lg~~~Gl~~~~~s~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~  233 (361)
T TIGR01366       154 DDALVVIDATSGAGGLPVDIAETDVYYFAPQKNFASDGGLWLAIMSPAALERIEAIAASGRWVPEFLSLPTAVDNSLKNQ  233 (361)
T ss_pred             CCCeEEEEcCccccCCCCCHHHCCEEEEEchhhcCCCCceEEEEECHHHHhhhhcccCCCCCCchhhhHHHHHhccccCC
Confidence            99999999999999988       2344432     244443   2 3333333110                    024


Q ss_pred             CCCCCcHHHHHHHHHHHHHHhch-hhHHHHHHHHHHHHHHHHHHHhCC-CEEec-CC-CCC-eEEEEEecCCCcchHHHH
Q psy10669        194 LQGGPHNHAIGAIATAMLQAQSD-EFKSYQAQVKANASHLSDEMIKRG-YHVVT-GG-TDV-HLILIDLRKNKLTGSKVE  268 (337)
Q Consensus       194 ~~g~~~~~~iaala~a~~e~~~~-~~~~y~~~v~~na~~l~~~L~~~G-~~v~~-~~-t~~-h~v~V~~~~~~~~~~~~~  268 (337)
                      ..+||+.+.+.++..+++++.+. ..+...++..+.++++.+.|.+.| ++++. +. ..+ .+..|.+. .+++..++.
T Consensus       234 t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~~v~~~-~g~~~~~v~  312 (361)
T TIGR01366       234 TYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVGTIDFV-DDIDAATVA  312 (361)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceEEEECC-CccCHHHHH
Confidence            46788888888999999999765 356777999999999999999987 56553 11 112 23456664 678999999


Q ss_pred             HHHhhcCceecc
Q psy10669        269 LVLEEIAIACNK  280 (337)
Q Consensus       269 ~~L~~~gI~v~~  280 (337)
                      ..|++.||.+.+
T Consensus       313 ~~L~~~gI~i~~  324 (361)
T TIGR01366       313 KILRANGIVDTE  324 (361)
T ss_pred             HHHHHCCCeecc
Confidence            999988999864

This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.

>cd00615 Orn_deC_like Ornithine decarboxylase family

Probab=99.36  E-value=8.1e-12  Score=118.15  Aligned_cols=156  Identities=19%  Similarity=0.141  Sum_probs=112.0

Q ss_pred             HHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHhhCCc------------------------------------
Q psy10669         77 IEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEKALPT------------------------------------  119 (337)
Q Consensus        77 lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~aLl~~------------------------------------  119 (337)
                      +-..++++++++||+++     .+..++| |.+|.+++.+++++                                    
T Consensus        60 ~i~~~~~~~A~~~ga~~-----~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~~~~g~~~~~v~~~~~~~~  134 (294)
T cd00615          60 PIKEAQELAARAFGAKH-----TFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGLVLSGAVPVYLKPERNPYY  134 (294)
T ss_pred             HHHHHHHHHHHHhCCCC-----EEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHHHHCCCEEEEecCccCccc
Confidence            34445578899999886     3443555 68899999998764                                    


Q ss_pred             -----------ccc-----cccEEEEc-CcccccccChHHHHHHhhhcCCeEEEecccccccc-----c----------e
Q psy10669        120 -----------NNA-----RFDFLSSG-TTCYSRCLDYARFRQICDETDSIMFADMSHISGLI-----A----------G  167 (337)
Q Consensus       120 -----------~~a-----~pklII~~-~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli-----~----------g  167 (337)
                                 +.+     ++++|+++ ++.++...|+++|.++|+++|++++||+||.+++.     .          .
T Consensus       135 ~~~~~i~~~~l~~~l~~~~~~k~v~l~~p~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~~~~~~div  214 (294)
T cd00615         135 GIAGGIPPETFKKALIEHPDAKAAVITNPTYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAMAGADIV  214 (294)
T ss_pred             CcCCCCCHHHHHHHHHhCCCceEEEEECCCCCCEecCHHHHHHHHHhcCCeEEEECcchhhhccCcccCcchhhcCCcEE
Confidence                       000     15766666 44457889999999999999999999999987431     1          1


Q ss_pred             eeeeccC------Cchhhh--h--HHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHH
Q psy10669        168 VKGVTKT------GEKILY--D--YEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMI  237 (337)
Q Consensus       168 ~~~T~~~------Gg~i~~--~--l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~  237 (337)
                      +.+++|.      ||++..  +  ..+++.........++|+.+.++++..++.++. .+++++.++++++++++++.|.
T Consensus       215 ~~S~hK~l~g~~~~~~l~~~~~~~~~~~~~~~~~~~~ttsps~~~~asl~~a~~~~~-~~g~~~~~~~~~~~~~~r~~l~  293 (294)
T cd00615         215 VQSTHKTLPALTQGSMIHVKGDLVNPDRVNEALNLHQSTSPSYLILASLDVARAMMA-LEGKELVEELIELALYARQEIN  293 (294)
T ss_pred             EEchhcccchHhHHHHHHhCCCcCCHHHHHHHHHHHCCCCcHHHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHh
Confidence            2344441      344433  2  134455554445578999999999999999884 4678899999999999999875


Q ss_pred             h
Q psy10669        238 K  238 (337)
Q Consensus       238 ~  238 (337)
                      +
T Consensus       294 ~  294 (294)
T cd00615         294 K  294 (294)
T ss_pred             C
Confidence            3

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.

>PRK07505 hypothetical protein; Provisional

Probab=99.36  E-value=2.6e-10  Score=112.36  Aligned_cols=234  Identities=15%  Similarity=0.122  Sum_probs=141.2

Q ss_pred             ccceeeeccCCCC----CHHHHHHHhhhhhhccC-CCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCC
Q psy10669         30 INGIELIASENFT----SLAVLECLGSCLQNKYS-EGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYS  104 (337)
Q Consensus        30 ~~~i~l~asen~~----~p~V~~a~~~~l~~~y~-~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~S  104 (337)
                      .+...-++|.+|+    +|+|.+|+...+. +|+ .++.+++....++...++|    ++++++++. .     .+.++|
T Consensus        45 g~~~ld~~s~~~lgl~~~p~v~~A~~~~l~-~~g~~~~~~~~~~~~~~~~~~l~----~~la~~~~~-~-----~~~~~s  113 (402)
T PRK07505         45 GHTFVNFVSCSYLGLDTHPAIIEGAVDALK-RTGSLHLSSSRTRVRSQILKDLE----EALSELFGA-S-----VLTFTS  113 (402)
T ss_pred             CceEEEeecCCccCCCCCHHHHHHHHHHHH-HhCCCCCCccchhhhhHHHHHHH----HHHHHHhCC-C-----EEEECC
Confidence            3445555567888    9999999987654 554 2333333322334444555    688899987 3     588889


Q ss_pred             CchhHHHHHHhhC----C--c------------------------------------ccc-----cccEEEEcCcccc--
Q psy10669        105 GSPANFAVCEKAL----P--T------------------------------------NNA-----RFDFLSSGTTCYS--  135 (337)
Q Consensus       105 gt~AN~~v~~aLl----~--~------------------------------------~~a-----~pklII~~~S~~~--  135 (337)
                      |+.||..++..+.    +  +                                    .+.     +++++|+.+.+++  
T Consensus       114 G~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~~d~~~l~~~~~~~~~~~vl~~p~~~~G  193 (402)
T PRK07505        114 CSAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICADETEVETIDHNDLDALEDICKTNKTVAYVADGVYSMG  193 (402)
T ss_pred             hHHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCCCCHHHHHHHHhcCCCEEEEEecccccC
Confidence            9999987764321    1  1                                    001     1466665544554  


Q ss_pred             cccChHHHHHHhhhcCCeEEEeccccccccc-----------e--------eeeec-c----CCchhhh---hHHHHHhh
Q psy10669        136 RCLDYARFRQICDETDSIMFADMSHISGLIA-----------G--------VKGVT-K----TGEKILY---DYEEKINN  188 (337)
Q Consensus       136 ~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----------g--------~~~T~-~----~Gg~i~~---~l~~~i~~  188 (337)
                      ...|.++|+++|+++|++|++|++|..|.++           +        +++|. |    .||+++.   ++.+.+..
T Consensus       194 ~~~~~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~Gg~~~~~~~~~~~~~~~  273 (402)
T PRK07505        194 GIAPVKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGASGGVIMLGDAEQIELILR  273 (402)
T ss_pred             CcCCHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhccCeEEEeCCHHHHHHHHH
Confidence            6778899999999999999999999754332           1        11232 2    2577653   46666666


Q ss_pred             ccCCCCCC-CCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHH
Q psy10669        189 AVFPSLQG-GPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKV  267 (337)
Q Consensus       189 ~~~p~~~g-~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~  267 (337)
                      ...|.+++ ++++..+++...++..+.+....+.++++.++.+.+.+.+...   +  .+....+.++.+... ....++
T Consensus       274 ~~~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---~--~g~~~~i~~~~~~~~-~~~~~~  347 (402)
T PRK07505        274 YAGPLAFSQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSLIPTE---Q--SGSFLPIRLIYIGDE-DTAIKA  347 (402)
T ss_pred             hCCCceeCCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhc---C--CCCCCCEEEEEeCCH-HHHHHH
Confidence            55565544 4556677776666554444445566677777766554433222   1  123344444444321 235667


Q ss_pred             HHHHhhcCceecc
Q psy10669        268 ELVLEEIAIACNK  280 (337)
Q Consensus       268 ~~~L~~~gI~v~~  280 (337)
                      .+.|.+.||.+..
T Consensus       348 ~~~l~~~Gi~v~~  360 (402)
T PRK07505        348 AKQLLDRGFYTSP  360 (402)
T ss_pred             HHHHHHCCCeEee
Confidence            7888888999975

>PLN02724 Molybdenum cofactor sulfurase

Probab=99.36  E-value=8.3e-11  Score=125.65  Aligned_cols=240  Identities=14%  Similarity=0.087  Sum_probs=153.6

Q ss_pred             ccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHh
Q psy10669         37 ASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEK  115 (337)
Q Consensus        37 asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~a  115 (337)
                      |+-...+|.+.+.....+... ..++|++.+.. .....++.+.+|+++++|||++++++  .|.|++| |.|+..+..+
T Consensus        41 Aatt~~~~~~V~~~~~~~~~~-~~~np~s~~~~-s~~~~~~~e~aR~~ia~~lga~~~~~--~VvFtsnaT~alnlva~~  116 (805)
T PLN02724         41 AGATLYSESQLEAALADFSSN-VYGNPHSQSDS-SMRSSDTIESARQQVLEYFNAPPSDY--ACVFTSGATAALKLVGET  116 (805)
T ss_pred             CCCCCCCHHHHHHHHHHHHhh-ccCCCCcCcch-hhhHHHHHHHHHHHHHHHhCCCccce--EEEEeCChHHHHHHHHHH
Confidence            334454654444443333322 23677754333 34455555679999999999976422  5788887 6776565677


Q ss_pred             h-CCc------------------ccc-------------------------------------------------cccEE
Q psy10669        116 A-LPT------------------NNA-------------------------------------------------RFDFL  127 (337)
Q Consensus       116 L-l~~------------------~~a-------------------------------------------------~pklI  127 (337)
                      + +++                  +++                                                 +++||
T Consensus       117 l~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LV  196 (805)
T PLN02724        117 FPWSSESHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLF  196 (805)
T ss_pred             CCCCCCCeEEEeeccccchHHHHHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhccccccCCCcceE
Confidence            6 322                  000                                                 02577


Q ss_pred             EEcC-cc-cccccChHHHHHHhhhc--------CCeEEEeccccccccc---------eeeeec------cCC-chh-hh
Q psy10669        128 SSGT-TC-YSRCLDYARFRQICDET--------DSIMFADMSHISGLIA---------GVKGVT------KTG-EKI-LY  180 (337)
Q Consensus       128 I~~~-S~-~~~~~d~~~l~eia~~~--------ga~l~vD~AH~~Gli~---------g~~~T~------~~G-g~i-~~  180 (337)
                      ++++ |+ .+...|++.+.++++..        +++++||+||++|.+.         .+++++      |+| |++ +.
T Consensus       197 a~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~~piDv~~~~~Dfl~~S~HK~~GgP~G~G~L~vr  276 (805)
T PLN02724        197 AFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGTSPPDLSRYPADFVVVSFYKIFGYPTGLGALLVR  276 (805)
T ss_pred             EEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCCCCCChhhcCCCEEEEecceeccCCCCceEEEEe
Confidence            7773 33 36999998876666542        3689999999999998         234443      333 433 33


Q ss_pred             -hHHHHHhhccCCC-----------------------CCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHH
Q psy10669        181 -DYEEKINNAVFPS-----------------------LQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEM  236 (337)
Q Consensus       181 -~l~~~i~~~~~p~-----------------------~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L  236 (337)
                       ++.+.+.+..+.+                       -.||++.+.++++..|+.++.+...+...+++.+++++|.+.|
T Consensus       277 ~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~l~~ig~~~I~~~~~~L~~~l~~~L  356 (805)
T PLN02724        277 RDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFKLLNRLTISAIAMHTWALTHYVANSL  356 (805)
T ss_pred             hhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence             4544444432221                       1589999999999999999876667888999999999999999


Q ss_pred             HhC-------CCEEecCC-----CCCeEEEEEecCCCc-----chHHHHHHHhhcCceecc
Q psy10669        237 IKR-------GYHVVTGG-----TDVHLILIDLRKNKL-----TGSKVELVLEEIAIACNK  280 (337)
Q Consensus       237 ~~~-------G~~v~~~~-----t~~h~v~V~~~~~~~-----~~~~~~~~L~~~gI~v~~  280 (337)
                      .+.       ++++++..     ...+..+|.++-.+.     ...++...++++||.++.
T Consensus       357 ~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~~~~v~~l~~~~gI~vR~  417 (805)
T PLN02724        357 RNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVGHREVEKLASLSGIQLRT  417 (805)
T ss_pred             HhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeCHHHHHHHHHhcCcEEee
Confidence            985       47777532     123444555544443     345677777888998875

>PRK15400 lysine decarboxylase CadA; Provisional

Probab=99.33  E-value=3.8e-11  Score=124.87  Aligned_cols=199  Identities=17%  Similarity=0.111  Sum_probs=147.0

Q ss_pred             HHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHhhCCc------------------------------------
Q psy10669         77 IEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEKALPT------------------------------------  119 (337)
Q Consensus        77 lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~aLl~~------------------------------------  119 (337)
                      .-..+++.+|++||++.     ....+.| |.+|.+++.+++++                                    
T Consensus       196 ~i~eAe~~AA~~fgAd~-----tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~haLilsga~PVYl~P~rn~~G  270 (714)
T PRK15400        196 PHKEAEEYIARVFNADR-----SYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYG  270 (714)
T ss_pred             HHHHHHHHHHHHhCCCc-----EEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccccccC
Confidence            44567889999999997     3455677 57899999999765                                    


Q ss_pred             -----------------ccc-----c-c-cEEEEcCcccccccChHHHHHHhhhcCCeEEEeccccc--cc---cc----
Q psy10669        120 -----------------NNA-----R-F-DFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHIS--GL---IA----  166 (337)
Q Consensus       120 -----------------~~a-----~-p-klII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~--Gl---i~----  166 (337)
                                       +++     + | .+||+.++.++...|++.|.++|+.++  ++||+||++  ++   +.    
T Consensus       271 i~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTYdG~~yd~~~I~~~~~~~~--ilvDEAwgah~~F~p~~~~~sa  348 (714)
T PRK15400        271 ILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPIYEGKCG  348 (714)
T ss_pred             CccCCCccccCHHHHHHHHHhCccccCccEEEEECCCCccEecCHHHHHHHhCCCC--EEEEccchhhhccCcccCCcCh
Confidence                             011     1 3 256666778899999999999999876  799999986  11   11    


Q ss_pred             ------------eeeeeccC-Cchhhh-------hH-HHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHH
Q psy10669        167 ------------GVKGVTKT-GEKILY-------DY-EEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQV  225 (337)
Q Consensus       167 ------------g~~~T~~~-Gg~i~~-------~l-~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v  225 (337)
                                  .+.||||. +||.-+       ++ .++++.+..=..+++|+.+.+|++.++...|..+.+++..+..
T Consensus       349 m~~ga~~~~~i~vtQStHKtL~alTQaS~LHvkg~vd~~~~n~a~~m~~STSPsY~l~ASLD~a~~~m~~~~G~~l~~~~  428 (714)
T PRK15400        349 MSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVNEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNAGKRLINGS  428 (714)
T ss_pred             hhcCCCCCCceEEEEchhhcccchhHHhHHHHcCCCCHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhhhHHHHHHH
Confidence                        13578774 233321       22 3567776544557899999999999999988655788999999


Q ss_pred             HHHHHHHHHHHHhC-C------CEEecC----------------------------CCCCeEEEEEecC---------CC
Q psy10669        226 KANASHLSDEMIKR-G------YHVVTG----------------------------GTDVHLILIDLRK---------NK  261 (337)
Q Consensus       226 ~~na~~l~~~L~~~-G------~~v~~~----------------------------~t~~h~v~V~~~~---------~~  261 (337)
                      ++.+..|++.|.+. +      |++...                            ..|.--+.|.+..         .|
T Consensus       429 i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP~Klti~tpgi~~~g~~~~~G  508 (714)
T PRK15400        429 IERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMKKDGTMSDFG  508 (714)
T ss_pred             HHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCccccccCcccccccccccCCceEEEEeCCCCCCccccccC
Confidence            99999999999873 4      555420                            0255566677654         67


Q ss_pred             cchHHHHHHHhhcCceeccCc
Q psy10669        262 LTGSKVELVLEEIAIACNKNT  282 (337)
Q Consensus       262 ~~~~~~~~~L~~~gI~v~~~~  282 (337)
                      +.+..+++.|+++||.+.+..
T Consensus       509 ipg~~v~~~L~e~gI~~E~~d  529 (714)
T PRK15400        509 IPASIVAKYLDEHGIVVEKTG  529 (714)
T ss_pred             CCHHHHHHHHHHcCCEEEecC
Confidence            889999999999999999876

>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme

Probab=99.33  E-value=3.3e-10  Score=110.44  Aligned_cols=227  Identities=16%  Similarity=0.105  Sum_probs=145.5

Q ss_pred             CCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc
Q psy10669         40 NFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT  119 (337)
Q Consensus        40 n~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~  119 (337)
                      +++|++|++++..... .|         + +   .+++...++++++++||.++     .+...++|.|+..++.+++++
T Consensus        23 s~~~~~v~~a~~~~~~-~~---------~-~---~~~~~~~~~~~~a~~~g~~~-----~~~~~g~t~al~~al~al~~~   83 (363)
T TIGR01437        23 STVSDEVADAQKRGAQ-NY---------F-E---IKELVNKTGEYIANLLGVED-----AVIVSSASAGIAQSVAAVITR   83 (363)
T ss_pred             CCCCHHHHHHHHHHHh-cC---------C-C---HHHHHHHHHHHHHHhhCCCe-----EEEEcCHHHHHHHHHHHHhcC
Confidence            4579999999986532 23         1 1   34455556678999999875     355566688988777876410


Q ss_pred             ----------------------------------------------------------ccc---cccEEEE--cCcc-cc
Q psy10669        120 ----------------------------------------------------------NNA---RFDFLSS--GTTC-YS  135 (337)
Q Consensus       120 ----------------------------------------------------------~~a---~pklII~--~~S~-~~  135 (337)
                                                                                +.+   ++++|+.  .+++ ++
T Consensus        84 Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~~~~~d~~~le~ai~~~t~ai~~v~~~~~~~g  163 (363)
T TIGR01437        84 GNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGYANECSAEQLEAAITEKTAAILYIKSHHCVQK  163 (363)
T ss_pred             CCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcCCCCCCHHHHHHhcChhceEEEEEecCCCCcC
Confidence                                                                      111   2576553  2333 46


Q ss_pred             cccChHHHHHHhhhcCCeEEEecccccccc-----c--eeeeec------cCCchhhh--hHHHHHhhccCC---CC-CC
Q psy10669        136 RCLDYARFRQICDETDSIMFADMSHISGLI-----A--GVKGVT------KTGEKILY--DYEEKINNAVFP---SL-QG  196 (337)
Q Consensus       136 ~~~d~~~l~eia~~~ga~l~vD~AH~~Gli-----~--g~~~T~------~~Gg~i~~--~l~~~i~~~~~p---~~-~g  196 (337)
                      ...|+++|.++|+++|+++++|+||...+-     +  .+++++      +++|+++.  ++.+.+......   .+ .+
T Consensus       164 ~~~~~~~i~~~a~~~gi~vivD~a~~~~~~~~~~~g~D~~~~S~~K~l~gp~~G~l~~~~~~i~~~~~~~~~~~~~~~~~  243 (363)
T TIGR01437       164 SMLSVEDAAQVAQEHNLPLIVDAAAEEDLQKYYRLGADLVIYSGAKAIEGPTSGLVLGKKKYIEWVKLQSKGIGRAMKVG  243 (363)
T ss_pred             CcCCHHHHHHHHHHcCCeEEEECCCCCchHHHHHcCCCEEEEeCCcccCCCceEEEEEcHHHHHHHHhccCCCcceeccC
Confidence            789999999999999999999999984331     1  233333      34677764  454444321111   11 22


Q ss_pred             CCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-CCCEEec--CC----CCCeEEEEEecCCCcchHHHHH
Q psy10669        197 GPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-RGYHVVT--GG----TDVHLILIDLRKNKLTGSKVEL  269 (337)
Q Consensus       197 ~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~G~~v~~--~~----t~~h~v~V~~~~~~~~~~~~~~  269 (337)
                      +   ..++|+..++.++.. ...+..++..+++++++++|.+ .|+++..  +.    .+...+.++....++++.++.+
T Consensus       244 ~---~~~~gl~aAl~~~~~-~~~~~~~~~~~~~~~l~~~L~~i~g~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~l~~  319 (363)
T TIGR01437       244 K---ENILGLTAALEQYLS-TGKESGAEMVAKLTPFIEALNTLKGVSASIVQDEAGRDIARAEIRFDESELGMTAADVVQ  319 (363)
T ss_pred             H---HHHHHHHHHHHHHHc-cCcccHHHHHHHHHHHHHHHhcCCCeEEEEecCCCCCcCceEEEEEeccCCCCCHHHHHH
Confidence            2   448899999988863 4455566666788899999998 5998873  11    1234444444446789999999


Q ss_pred             HHhhcC--ceecc----Ccccchhhh
Q psy10669        270 VLEEIA--IACNK----NTGISLAAE  289 (337)
Q Consensus       270 ~L~~~g--I~v~~----~~girig~~  289 (337)
                      +|.+.|  |.++.    ...+||...
T Consensus       320 ~L~~~~~~I~~r~~~~~~~~~~l~~~  345 (363)
T TIGR01437       320 ALRQGEPAIYTRGYKANEGIIEIDPR  345 (363)
T ss_pred             HHhcCCCCEEEeeeeecCCeEEEEee
Confidence            998655  77764    225555443

This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.

>KOG1549|consensus

Probab=99.32  E-value=6.6e-11  Score=115.17  Aligned_cols=194  Identities=17%  Similarity=0.130  Sum_probs=129.8

Q ss_pred             eccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHH
Q psy10669         36 IASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCE  114 (337)
Q Consensus        36 ~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~  114 (337)
                      ..+--.++|.|.+||...+.+-  .|+|.++ +-|.+.-+.+| .+|+.+|+++|+++.    +|.|+|| |.+|..++.
T Consensus        49 ~~at~p~~~~Vldam~~~~~~~--~~nPh~~-~y~w~~~~~~E-~aR~~VAklInAd~~----dIiFts~ATEs~Nlvl~  120 (428)
T KOG1549|consen   49 NQATGPMDPRVLDAMLPYLLEY--LGNPHSR-SYGWKAEDAVE-AAREQVAKLINADPS----DIVFTSGATESNNLVLK  120 (428)
T ss_pred             cCcCCCCCHHHHHHHHHHHHHh--hcCCCcc-ccchhhhHHHH-HHHHHHHHHhCCCCC----cEEEeCCchHHHHHHHH
Confidence            4455667999999998765543  4899999 33444444555 689999999999994    7999999 788777788


Q ss_pred             hhCC--------c-----------------------------------------ccc---cccEEEEcCccc--ccccCh
Q psy10669        115 KALP--------T-----------------------------------------NNA---RFDFLSSGTTCY--SRCLDY  140 (337)
Q Consensus       115 aLl~--------~-----------------------------------------~~a---~pklII~~~S~~--~~~~d~  140 (337)
                      ++..        .                                         +.+   +++++.+..-++  +-..|+
T Consensus       121 ~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~~~~~~d~~~~~~~i~~~T~lv~I~~Vnn~~gv~~Pv  200 (428)
T KOG1549|consen  121 GVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVEDSGLVDISKLREAIRSKTRLVSIMHVNNEIGVLQPV  200 (428)
T ss_pred             HhhccccccccceEEEecccCcchhHHHHHHHhcCeEEEEeccCccccccHHHHHHhcCCCceEEEEEecccCccccccH
Confidence            8732        0                                         111   278998874332  578899


Q ss_pred             HHHHHHhhhcCCeEEEeccccccccce---------eeeecc-----CC--chhhhhHHHHHh--hccCC------CCCC
Q psy10669        141 ARFRQICDETDSIMFADMSHISGLIAG---------VKGVTK-----TG--EKILYDYEEKIN--NAVFP------SLQG  196 (337)
Q Consensus       141 ~~l~eia~~~ga~l~vD~AH~~Gli~g---------~~~T~~-----~G--g~i~~~l~~~i~--~~~~p------~~~g  196 (337)
                      ++|..||++.|..+++|+||..|.+..         +++..|     +|  .+++....+.+.  +-+..      .-.|
T Consensus       201 ~EI~~icr~~~v~v~~DaAQavG~i~vDV~eln~D~~s~s~HK~ygp~~iGaLYvr~~~~~~~~~p~~~GGgq~r~~rsG  280 (428)
T KOG1549|consen  201 KEIVKICREEGVQVHVDAAQAVGKIPVDVQELNADFLSISAHKIYGPPGIGALYVRRKRPRLRVEPPLSGGGQERGLRSG  280 (428)
T ss_pred             HHHHHHhCcCCcEEEeehhhhcCCccccHHHcCchheeeecccccCCCcceEEEEccCCCcccccCcccCCccccccccC
Confidence            999999999999999999999999992         222222     33  333322111111  21122      2258


Q ss_pred             CCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh
Q psy10669        197 GPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK  238 (337)
Q Consensus       197 ~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~  238 (337)
                      |...+.+.++..|++.+. .++.-+-..+.++...|...+..
T Consensus       281 T~~~~~~~~~gsA~e~~~-~~~~~~~~~~~~~~~~ll~~i~~  321 (428)
T KOG1549|consen  281 TVATPLAVGLGSAAEFVN-KEMAYDEAIIKRLSEKLLMGIGQ  321 (428)
T ss_pred             CcCchhhhhhHHHHHHHH-hhcchhHHHHHHHHHHHHHHHhh
Confidence            889999999999887764 33333333444455555555544

>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase

Probab=99.32  E-value=4.9e-10  Score=107.44  Aligned_cols=237  Identities=14%  Similarity=0.112  Sum_probs=153.3

Q ss_pred             ccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceee-cCCCchhHHHHHHh
Q psy10669         37 ASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQ-PYSGSPANFAVCEK  115 (337)
Q Consensus        37 asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~-~~Sgt~AN~~v~~a  115 (337)
                      |---.++|.|++++...+..         |   ...+ .++-...++.+++++|+++..  ..+. ..||+.++..++.+
T Consensus         5 p~p~~~~~~~~~~~~~~~~~---------~---~~~~-~~~~~~~~~~la~~~~~~~~~--~~i~~~~~gt~~l~~~~~~   69 (355)
T TIGR03301         5 PGPLSTSATVRDAMLVDWCH---------W---DSEF-NDVTDQVRDRLLALAGGDDNH--TCVLLQGSGTFAVEATIGS   69 (355)
T ss_pred             CCCCCCCHHHHHHhhhhccC---------C---CHHH-HHHHHHHHHHHHHHhcCCCCC--cEEEEeCCcHHHHHHHHHh
Confidence            33445689999998752111         1   1111 233334557999999998631  1344 45778999888888


Q ss_pred             hCCc-------------------------------------------ccc---cc--cEEEEc--CcccccccChHHHHH
Q psy10669        116 ALPT-------------------------------------------NNA---RF--DFLSSG--TTCYSRCLDYARFRQ  145 (337)
Q Consensus       116 Ll~~-------------------------------------------~~a---~p--klII~~--~S~~~~~~d~~~l~e  145 (337)
                      ++++                                           +.+   +|  ++|+..  ++..+...|+++|.+
T Consensus        70 ~~~~~~~vi~~~~~~~~~~~~~~a~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~~~~i~~  149 (355)
T TIGR03301        70 LVPRDGKLLVLINGAYGERLAKICEYLGIPHTDLNFSEYEPPDLNRIEEALAADPDITHVATVHHETTTGILNPLEAIAK  149 (355)
T ss_pred             ccCCCCeEEEECCCchhhHHHHHHHHcCCceEEEecCCCCCCCHHHHHHHHHhCCCceEEEEEecCCcccchhHHHHHHH
Confidence            8643                                           000   13  344443  344578889999999


Q ss_pred             HhhhcCCeEEEeccccccccc---------eeeee-cc-----CC-chhhh--hHHHHHhhccCC---------------
Q psy10669        146 ICDETDSIMFADMSHISGLIA---------GVKGV-TK-----TG-EKILY--DYEEKINNAVFP---------------  192 (337)
Q Consensus       146 ia~~~ga~l~vD~AH~~Gli~---------g~~~T-~~-----~G-g~i~~--~l~~~i~~~~~p---------------  192 (337)
                      +|+++|+++++|++|+.|.+.         .++++ +|     .| |+++.  ++.+.+.....|               
T Consensus       150 l~~~~~~~livD~~~s~g~~~~~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (355)
T TIGR03301       150 VARSHGAVLIVDAMSSFGAIPIDIEELDVDALIASANKCLEGVPGFGFVIARRDLLEASAGNARSLYLDLYDQWAYMEKT  229 (355)
T ss_pred             HHHHcCCEEEEEeccccCCcccchhhcCccEEEecCCcccccCCceeEEEECHHHHHHhhCCCCCceeeHHHHHHHhhhc
Confidence            999999999999999998765         12233 33     23 45543  444443311111               


Q ss_pred             -CCCCCCcHHHHHHHHHHHHHHhchh-hHHHHHHHHHHHHHHHHHHHhCCCEEecC-CCCCe-EEEEEecC-CCcchHHH
Q psy10669        193 -SLQGGPHNHAIGAIATAMLQAQSDE-FKSYQAQVKANASHLSDEMIKRGYHVVTG-GTDVH-LILIDLRK-NKLTGSKV  267 (337)
Q Consensus       193 -~~~g~~~~~~iaala~a~~e~~~~~-~~~y~~~v~~na~~l~~~L~~~G~~v~~~-~t~~h-~v~V~~~~-~~~~~~~~  267 (337)
                       ....+++.+.++++..++..+.+.. +++..++..++.+++.+.|.+.|+++... ...+. ++++.+.. ...+..++
T Consensus       230 ~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (355)
T TIGR03301       230 GKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRALGFQPLLPERWQSPIIVSFLYPDDPDFDFDDF  309 (355)
T ss_pred             CCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCCCCcEEEEECCCCCcchHHHH
Confidence             1234788889999999998886544 67888899999999999999999987642 12233 34455443 12456688


Q ss_pred             HHHHhhcCceeccCc-----ccchhh
Q psy10669        268 ELVLEEIAIACNKNT-----GISLAA  288 (337)
Q Consensus       268 ~~~L~~~gI~v~~~~-----girig~  288 (337)
                      .+.|.+.||.+.+-.     .|||+.
T Consensus       310 ~~~l~~~gi~i~~~~~~~~~~iRis~  335 (355)
T TIGR03301       310 YQELKERGFVIYPGKLTLADTFRIGT  335 (355)
T ss_pred             HHHHHHCCEEEECCccccccEEEEec
Confidence            899998999986542     678764

This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.

>PRK15399 lysine decarboxylase LdcC; Provisional

Probab=99.31  E-value=5.6e-11  Score=123.57  Aligned_cols=198  Identities=17%  Similarity=0.133  Sum_probs=144.4

Q ss_pred             HHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHhhCCc------------------------------------
Q psy10669         77 IEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEKALPT------------------------------------  119 (337)
Q Consensus        77 lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~aLl~~------------------------------------  119 (337)
                      .-..+++.+|++||++.     ....++| |.+|.+++.+++++                                    
T Consensus       196 ~i~eAe~~aA~~fgAd~-----tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~aLilsga~PVYl~P~~n~~G  270 (713)
T PRK15399        196 PHLEAEEYIARTFGAEQ-----SYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAHLLMMSDVVPIWLKPTRNALG  270 (713)
T ss_pred             HHHHHHHHHHHHhCCCc-----EEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeeEEecccccccC
Confidence            34567889999999997     3555677 56899999999765                                    


Q ss_pred             -----------------cc-----c-cccEEEEc-CcccccccChHHHHHHhhhcCCeE-EEeccccc--cccc------
Q psy10669        120 -----------------NN-----A-RFDFLSSG-TTCYSRCLDYARFRQICDETDSIM-FADMSHIS--GLIA------  166 (337)
Q Consensus       120 -----------------~~-----a-~pklII~~-~S~~~~~~d~~~l~eia~~~ga~l-~vD~AH~~--Gli~------  166 (337)
                                       .+     + +|+.+|++ ++.++...|++.|.++|   |+.+ +||+||++  ++..      
T Consensus       271 i~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTYdGi~yd~~~I~~~~---g~~~ilvDEAhgah~~F~p~~~~~s  347 (713)
T PRK15399        271 ILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTYDGLLYNTDWIKQTL---DVPSIHFDSAWVPYTHFHPIYQGKS  347 (713)
T ss_pred             CcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCCCCceeeCHHHHHHHh---CCCEEEEeccchhhhhcCcccCCcC
Confidence                             00     1 24555554 77789999999998888   5666 69999985  1111      


Q ss_pred             ----------e---eeeeccC------Cchhhh--hH-HHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHH
Q psy10669        167 ----------G---VKGVTKT------GEKILY--DY-EEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQ  224 (337)
Q Consensus       167 ----------g---~~~T~~~------Gg~i~~--~l-~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~  224 (337)
                                +   +.||||.      +.+|-.  ++ .++++.+..-..+++|+.+.+|++.++...|..+.+++..+.
T Consensus       348 am~~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~~vd~~~~n~a~~m~~STSPsY~LmASLD~a~~~m~~~~G~~l~~~  427 (713)
T PRK15399        348 GMSGERVPGKVIFETQSTHKMLAAFSQASLIHIKGEYDEETFNEAFMMHTSTSPSYPIVASVETAAAMLRGNPGKRLINR  427 (713)
T ss_pred             hhhCCCCCCeeeeeeeehhccccccchheeeeecCCCCHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhhhHHHHHH
Confidence                      2   4688874      333311  22 356777655455789999999999999999865578899999


Q ss_pred             HHHHHHHHHHHHHhCC-------CEEecC----------------------------CCCCeEEEEEec---------CC
Q psy10669        225 VKANASHLSDEMIKRG-------YHVVTG----------------------------GTDVHLILIDLR---------KN  260 (337)
Q Consensus       225 v~~na~~l~~~L~~~G-------~~v~~~----------------------------~t~~h~v~V~~~---------~~  260 (337)
                      .++.+..+++.|.+.+       |++...                            ..|.--+.|.+.         ..
T Consensus       428 ~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf~~~~~~~~~lDP~KltI~t~g~~~~g~~~~~  507 (713)
T PRK15399        428 SVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVAPGEQWHGFKDADADHMFLDPVKVTILTPGMDEQGNMSEE  507 (713)
T ss_pred             HHHHHHHHHHHHHhccccccCceeeecCccccCCccceecCCCcccccccccccccccCCCceEEEEecCcccccccccC
Confidence            9999999999998743       455420                            125555667665         45


Q ss_pred             CcchHHHHHHHhhcCceeccCc
Q psy10669        261 KLTGSKVELVLEEIAIACNKNT  282 (337)
Q Consensus       261 ~~~~~~~~~~L~~~gI~v~~~~  282 (337)
                      |++|..+.+.|+++||.+.+..
T Consensus       508 Gi~g~~l~~~L~e~gI~~E~~d  529 (713)
T PRK15399        508 GIPAALVAKFLDERGIVVEKTG  529 (713)
T ss_pred             CCCHHHHHHHHHHcCCEEEecC
Confidence            8899999999999999999866

>KOG1358|consensus

Probab=99.28  E-value=5.4e-11  Score=113.55  Aligned_cols=257  Identities=15%  Similarity=0.149  Sum_probs=175.5

Q ss_pred             hcccceeeeccCCCC----CHHHHHHHhhhhhhccCCCCCCCcCcCccchHH-HHHHHHHHHHHhhcCCCCCCCcceeec
Q psy10669         28 RQINGIELIASENFT----SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFID-EIEIVAQQRSLKAFNLDPEQWGCNVQP  102 (337)
Q Consensus        28 rq~~~i~l~asen~~----~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~-~lE~~~~~~~a~lfg~~~~~~~~~v~~  102 (337)
                      -.++.+..+||.||+    ++.+.+..... ..+|+.|..|.|.+=|+.+.+ .+|    +++++|+|++.     .+.+
T Consensus        91 i~G~~~~N~aS~NfL~l~~~~~ike~a~~~-lrkyGvGsCGPrGFYGt~DvHldlE----~~iakF~G~E~-----aivY  160 (467)
T KOG1358|consen   91 IDGKDVLNFASANFLGLIENEEIKEEASFT-LRKYGVGSCGPRGFYGTIDVHLDLE----KRIAKFMGTED-----AIVY  160 (467)
T ss_pred             ecCceeecccchhhhhhcccHHHHHHHHHH-HHHhCCCCcCCCcccccceeecccH----HHHHHhhCCcc-----eeee
Confidence            345567779999999    88998888765 568999999999888997774 898    58899999997     5888


Q ss_pred             CCCchhHHHHHHhhCCc-----------------------------------------cc----------ccc-cEEEEc
Q psy10669        103 YSGSPANFAVCEKALPT-----------------------------------------NN----------ARF-DFLSSG  130 (337)
Q Consensus       103 ~Sgt~AN~~v~~aLl~~-----------------------------------------~~----------a~p-klII~~  130 (337)
                      .-|+.+...++.|+++.                                         +.          +.+ +.||+ 
T Consensus       161 s~gF~ti~S~ipafsKrGDIi~~de~~nfaIq~GlqlSRS~i~~Fkhndm~~lerll~E~~~~~~K~~k~~~~Rrfiv~-  239 (467)
T KOG1358|consen  161 SYGFSTIESAIPAFSKRGDIIFVDEAVNFAIQKGLQLSRSTISYFKHNDMEDLERLLPEQEDEDQKNPKKALTRRFIVV-  239 (467)
T ss_pred             ccccchhhhcchhhhccCcEEEEehhhhHHHHHHHhhhhheeEEecCCCHHHHHHhccCcchhhhhccccccceEEEEE-
Confidence            88888777677888654                                         11          112 34555 


Q ss_pred             Cccc---ccccChHHHHHHhhhcCCeEEEeccccccccc----ee--------------eeec-----cCCchhhhh---
Q psy10669        131 TTCY---SRCLDYARFRQICDETDSIMFADMSHISGLIA----GV--------------KGVT-----KTGEKILYD---  181 (337)
Q Consensus       131 ~S~~---~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~----g~--------------~~T~-----~~Gg~i~~~---  181 (337)
                      +..|   +...|..+|-+++.||...+++|++.+.|+++    |+              ++.+     ..|||..++   
T Consensus       240 EGl~~N~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas~GgFc~G~~~i  319 (467)
T KOG1358|consen  240 EGLYANTGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALASGGGFCAGKSFI  319 (467)
T ss_pred             EeeccCCCcccccHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeecccccccccCceeecceee
Confidence            4555   56666667778889999999999999999999    22              1111     247777662   


Q ss_pred             -HHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecC
Q psy10669        182 -YEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRK  259 (337)
Q Consensus       182 -l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~  259 (337)
                       ..+++...  .+.+|...+|.+++.+.....+++ .-++..+.+.+.+..+.+.|... |+.+. +...++++-+-+..
T Consensus       320 ~~hQrLSg~--~Y~fSAslPp~la~aa~~ai~i~~-~~p~~~~~L~~k~~~~H~~l~~~s~~~v~-~~~~SPi~hl~l~~  395 (467)
T KOG1358|consen  320 ADHQRLSGS--GYCFSASLPPYLAGAAIKAILIEE-WNPEIVQPLRAKVAKFHAALSSNSGFIVS-GSPESPIIHLQLER  395 (467)
T ss_pred             Eeeeecccc--ceeeeccCchhhhhhHHHHHHHHh-hCcchhhhhhccccccchhhhcCCceEEe-cCcCCceeeeeecc
Confidence             22344432  344677888888877776666543 33567888888888888888874 56665 56788888887766


Q ss_pred             CCcchHHHHHHHhh-------cCceeccCc------------ccchhhhhHhhhCCCHHHHHH
Q psy10669        260 NKLTGSKVELVLEE-------IAIACNKNT------------GISLAAEIQAISGPKLVDFQT  303 (337)
Q Consensus       260 ~~~~~~~~~~~L~~-------~gI~v~~~~------------girig~~~~t~~G~~~~~~~~  303 (337)
                      ...+..+=.+.|++       .|+.+-.+.            +|||.    -+.|+...|+.+
T Consensus       396 ~~~s~e~e~~lL~eivd~~i~~~~ll~~a~~~~~~e~~~~~pSiri~----~~a~~seeel~r  454 (467)
T KOG1358|consen  396 SYGSREKEEKLLEEIVDKCIAEGVLLTRAKYLEKLERCPIPPSIRIC----VSAGMSEEELER  454 (467)
T ss_pred             cccchHHHHHHHHHHHHHHHhhcceehhhhhhhhcccCCCCCcEEEE----EeCCCCHHHHHH
Confidence            43333333333332       155544333            66664    345666666554

>PRK13578 ornithine decarboxylase; Provisional

Probab=99.27  E-value=1.8e-10  Score=119.86  Aligned_cols=198  Identities=17%  Similarity=0.116  Sum_probs=143.1

Q ss_pred             HHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHhhCCc------------------------------------
Q psy10669         77 IEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEKALPT------------------------------------  119 (337)
Q Consensus        77 lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~aLl~~------------------------------------  119 (337)
                      .-..+++.+|++||++.+     .....| |.+|.+++.|++++                                    
T Consensus       175 ~i~eAq~~AA~~fgAd~t-----yFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hgaLiLsGa~PVYl~P~~n~~  249 (720)
T PRK13578        175 AAKDAQKHAAKVFNADKT-----YFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHGALIQAGATPVYLETARNPF  249 (720)
T ss_pred             HHHHHHHHHHHHhCCCce-----EEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHHcCCeEEEeecccccc
Confidence            345678899999999973     445577 56899999988765                                    


Q ss_pred             ---------c----------------cc---cc-cEEEEc-CcccccccChHHHHHH-hhhcCCeEEEeccccccc--cc
Q psy10669        120 ---------N----------------NA---RF-DFLSSG-TTCYSRCLDYARFRQI-CDETDSIMFADMSHISGL--IA  166 (337)
Q Consensus       120 ---------~----------------~a---~p-klII~~-~S~~~~~~d~~~l~ei-a~~~ga~l~vD~AH~~Gl--i~  166 (337)
                               +                .+   +| |++|++ ++.++...|++.|.++ +++++ +|+||+||++=+  ..
T Consensus       250 Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTYdG~~ydi~~I~~~~~h~~~-~llvDEAhgah~~F~p  328 (720)
T PRK13578        250 GFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTYDGTIYNARQVVDKIGHLCD-YILFDSAWVGYEQFIP  328 (720)
T ss_pred             CCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCCcceeecHHHHHHHhhccCC-cEEEeCcchhhhccCc
Confidence                     0                00   13 655554 7778999999999998 78888 999999998611  11


Q ss_pred             --------------------eeeeeccC------Cchhhh-h--H--------HHHHhhccCCCCCCCCcHHHHHHHHHH
Q psy10669        167 --------------------GVKGVTKT------GEKILY-D--Y--------EEKINNAVFPSLQGGPHNHAIGAIATA  209 (337)
Q Consensus       167 --------------------g~~~T~~~------Gg~i~~-~--l--------~~~i~~~~~p~~~g~~~~~~iaala~a  209 (337)
                                          .+.||||.      +.+|-. +  +        .++++.+..=..+++|+.+.+|++.++
T Consensus       329 ~~~~~p~~al~~GaD~p~i~v~QStHKtL~alTQaS~LHvk~~~i~g~~~~v~~~r~~~al~m~qSTSPsY~LmASLDva  408 (720)
T PRK13578        329 MMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNHIKGQARYCPHKRLNNAFMLHASTSPFYPLFAALDVN  408 (720)
T ss_pred             ccccCChhhhhcCCCCCCeEEEEChhhcchhhhhHhhhhcCCcccccccccCCHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence                                14678874      333321 1  1        257777755455789999999999999


Q ss_pred             HHHHhchhhHHHHHHHHHHHHHHHHHH-Hh-CCCEEec---------------------------------C--------
Q psy10669        210 MLQAQSDEFKSYQAQVKANASHLSDEM-IK-RGYHVVT---------------------------------G--------  246 (337)
Q Consensus       210 ~~e~~~~~~~~y~~~v~~na~~l~~~L-~~-~G~~v~~---------------------------------~--------  246 (337)
                      ...+..+.+++..+..++.+..+++.| .. .+|++..                                 |        
T Consensus       409 ~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~  488 (720)
T PRK13578        409 AKMHEGESGRRLWMECVKLGIEARKLILARCKLIRPFIPPVVDGKPWQDYPTEQIASDLRFFSFEPGEKWHGFEGYAEDQ  488 (720)
T ss_pred             HHHHHHhhCHHHHHHHHHHHHHHHHHHHHhCCCeeecccccccccccccCchhhhcccccccccccCccccccccccccc
Confidence            988865678899999999999999999 33 5777661                                 0        


Q ss_pred             -CCCCeEEEEEecCCCcc------------hHHHHHHHhhcCceeccCc
Q psy10669        247 -GTDVHLILIDLRKNKLT------------GSKVELVLEEIAIACNKNT  282 (337)
Q Consensus       247 -~t~~h~v~V~~~~~~~~------------~~~~~~~L~~~gI~v~~~~  282 (337)
                       ..|.--+.|.+  .|++            |.++.+.|.+.||.+.+..
T Consensus       489 ~~lDP~KltI~t--~G~~~~~G~~~~~Gipg~~l~~~L~e~gI~~E~~d  535 (720)
T PRK13578        489 YFVDPCKLLLTT--PGIDAETGEYEDFGIPATILANYLRENGIVPEKCD  535 (720)
T ss_pred             cccCCceEEEEc--CCcCcccccccccCccHHHHHHHHHHcCCEEEecC
Confidence             01444455554  3444            7999999977799999876

>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]

Probab=99.23  E-value=2.4e-09  Score=104.14  Aligned_cols=241  Identities=13%  Similarity=0.073  Sum_probs=170.5

Q ss_pred             ceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHH
Q psy10669         32 GIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFA  111 (337)
Q Consensus        32 ~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~  111 (337)
                      .+.|.|-=--++|.|++||.....+-        |    ......+-..+.+.++.+|+.+.. | +-+...|||.+.-+
T Consensus         6 ~~Ll~PGP~~v~~~V~~am~~~~~~h--------~----s~~F~~~~~~~~~~L~~v~~t~~~-~-~~ll~gsGt~amEA   71 (383)
T COG0075           6 RLLLTPGPVPVPPRVLLAMARPMVGH--------R----SPDFVGIMKEVLEKLRKVFGTENG-D-VVLLSGSGTLAMEA   71 (383)
T ss_pred             ceeeeCCCCCCCHHHHHHhcCCCCCC--------C----CHHHHHHHHHHHHHHHHHhcCCCC-c-EEEEcCCcHHHHHH
Confidence            46777887888999999998643321        1    112233444556799999998831 2 45666888999999


Q ss_pred             HHHhhCCc---------------------------------------------cccc---ccEEEEc--CcccccccChH
Q psy10669        112 VCEKALPT---------------------------------------------NNAR---FDFLSSG--TTCYSRCLDYA  141 (337)
Q Consensus       112 v~~aLl~~---------------------------------------------~~a~---pklII~~--~S~~~~~~d~~  141 (337)
                      .+..+++|                                             .+.+   .++|.+.  +++-++.-|++
T Consensus        72 av~sl~~pgdkVLv~~nG~FG~R~~~ia~~~g~~v~~~~~~wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnpl~  151 (383)
T COG0075          72 AVASLVEPGDKVLVVVNGKFGERFAEIAERYGAEVVVLEVEWGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNPLK  151 (383)
T ss_pred             HHHhccCCCCeEEEEeCChHHHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcCCCccEEEEEeccCcccccCcHH
Confidence            99999875                                             1111   3555554  66778888999


Q ss_pred             HHHHHhhhcCCeEEEeccccccccc------e----eeeec-----cCC-chh-------------------hh--hHHH
Q psy10669        142 RFRQICDETDSIMFADMSHISGLIA------G----VKGVT-----KTG-EKI-------------------LY--DYEE  184 (337)
Q Consensus       142 ~l~eia~~~ga~l~vD~AH~~Gli~------g----~~~T~-----~~G-g~i-------------------~~--~l~~  184 (337)
                      +|.++|+++|++++||+=-+.|-..      |    ++++.     |-| |++                   +.  ++.+
T Consensus       152 ~I~~~~k~~g~l~iVDaVsS~Gg~~~~vd~wgiDv~itgSQK~l~~PPGla~v~~S~~a~e~~~~~~~~~~ylDL~~~~~  231 (383)
T COG0075         152 EIAKAAKEHGALLIVDAVSSLGGEPLKVDEWGIDVAITGSQKALGAPPGLAFVAVSERALEAIEERKHPSFYLDLKKWLK  231 (383)
T ss_pred             HHHHHHHHcCCEEEEEecccCCCcccchhhcCccEEEecCchhccCCCccceeEECHHHHHHHhcCCCCceeecHHHHHH
Confidence            9999999999999999987877776      1    22221     122 222                   11  2333


Q ss_pred             HHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEec-CCCCCeEEEEEecCCCcc
Q psy10669        185 KINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVT-GGTDVHLILIDLRKNKLT  263 (337)
Q Consensus       185 ~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~-~~t~~h~v~V~~~~~~~~  263 (337)
                      ..+..  .....||..+.+.|+..+++.++++..+.+.++-.++++++++.+.+.|++++. ..-.+..+.....+.+++
T Consensus       232 ~~~~~--~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~alGl~~~~~~~~~s~tvta~~~P~g~~  309 (383)
T COG0075         232 YMEKK--GSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEALGLELFADPERRSPTVTAIKVPEGVD  309 (383)
T ss_pred             HHhhc--CCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCccccCcccCCCceEEEECCCCCC
Confidence            44432  223349999999999999999987777999999999999999999999999987 234455666666777877


Q ss_pred             hHHHHH-HHhhcCceeccCc------ccchhh
Q psy10669        264 GSKVEL-VLEEIAIACNKNT------GISLAA  288 (337)
Q Consensus       264 ~~~~~~-~L~~~gI~v~~~~------girig~  288 (337)
                      ..++.. .++++||.+..-.      -+|||.
T Consensus       310 ~~~~~~~~~~~~g~~i~gg~~~l~gkifRIGh  341 (383)
T COG0075         310 DKKVRRALLKEYGVEIAGGQGPLKGKIFRIGH  341 (383)
T ss_pred             cHHHHHHHHHhCCEEecccccccCccEEEEec
Confidence            655555 5556899987654      688873

>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional

Probab=99.23  E-value=9.1e-10  Score=107.91  Aligned_cols=217  Identities=13%  Similarity=0.149  Sum_probs=136.4

Q ss_pred             CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhh-CCc-
Q psy10669         42 TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKA-LPT-  119 (337)
Q Consensus        42 ~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aL-l~~-  119 (337)
                      .++.-.+++...+.+.+        ++. .....++|    +++++++|+++     .+.++|||.|+..++.++ +++ 
T Consensus        12 ~~~~e~~~~~~~l~~~~--------~~~-g~~~~~le----~~la~~~g~~~-----~v~~~sgt~al~lal~al~~~~G   73 (379)
T PRK11658         12 MGDEELAAVKEVLRSGW--------ITT-GPKNQALE----QAFCQLTGNQH-----AIAVSSATAGMHITLMALGIGPG   73 (379)
T ss_pred             CCHHHHHHHHHHHHcCC--------ccC-CHhHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHcCCCCC
Confidence            34555666665543311        111 23467787    57889999985     577888999988888888 543 


Q ss_pred             -----------------------------------------ccc---cccEEEEcCcccccccChHHHHHHhhhcCCeEE
Q psy10669        120 -----------------------------------------NNA---RFDFLSSGTTCYSRCLDYARFRQICDETDSIMF  155 (337)
Q Consensus       120 -----------------------------------------~~a---~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~  155 (337)
                                                               +.+   ++|+|+..+ .++...|+++|.++|+++|++++
T Consensus        74 d~Viv~~~~~~~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~~tkav~~~~-~~G~~~d~~~i~~~a~~~gi~vi  152 (379)
T PRK11658         74 DEVITPSLTWVSTLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITPRTKAIIPVH-YAGAPADLDAIRAIGERYGIPVI  152 (379)
T ss_pred             CEEEECCCcHHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcccCCeEEEEeC-CCCCcCCHHHHHHHHHHcCCeEE
Confidence                                                     101   267887654 47889999999999999999999


Q ss_pred             Eeccccccccc--------e--eeeec-------cCCchhhh---hHHHHHhhccCCCC--------------------C
Q psy10669        156 ADMSHISGLIA--------G--VKGVT-------KTGEKILY---DYEEKINNAVFPSL--------------------Q  195 (337)
Q Consensus       156 vD~AH~~Gli~--------g--~~~T~-------~~Gg~i~~---~l~~~i~~~~~p~~--------------------~  195 (337)
                      +|+||..|..-        |  +.|.+       ..||++++   ++.+++......+.                    .
T Consensus       153 ~D~a~a~g~~~~~~~~g~~g~~~~Sf~~~K~l~~g~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~  232 (379)
T PRK11658        153 EDAAHAVGTYYKGRHIGARGTAIFSFHAIKNITCAEGGLVVTDDDELADRLRSLKFHGLGVDAFDRQTQGRAPQAEVLTP  232 (379)
T ss_pred             EECCCccCCeECCeecCCCCCEEEeCCCCCcCcccCceEEEECCHHHHHHHHHHHHcCCCcchhhhhcccCCCcceeecc
Confidence            99999988654        1  11111       24787775   35554433211110                    0


Q ss_pred             CCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEec-CCC---C-CeEEEEEecC--CCcchHHHH
Q psy10669        196 GGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVT-GGT---D-VHLILIDLRK--NKLTGSKVE  268 (337)
Q Consensus       196 g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~-~~t---~-~h~v~V~~~~--~~~~~~~~~  268 (337)
                      |.  +..+..+.+|+...+....++..++-.++++++.+.|.+.++..+. ...   . .|+.++.+..  .+.+..++.
T Consensus       233 G~--n~~~~~l~AAl~~~ql~~l~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~  310 (379)
T PRK11658        233 GY--KYNLADINAAIALVQLAKLEALNARRREIAARYLQALADLPFQPLSLPAWPHQHAWHLFIIRVDEERCGISRDALM  310 (379)
T ss_pred             cc--ccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEEEEEEEECCccccCCHHHHH
Confidence            11  1123344444444433456777888888899999999876543222 111   1 2566666643  245678888


Q ss_pred             HHHhhcCceec
Q psy10669        269 LVLEEIAIACN  279 (337)
Q Consensus       269 ~~L~~~gI~v~  279 (337)
                      +.|.+.||.+.
T Consensus       311 ~~L~~~gI~~~  321 (379)
T PRK11658        311 EALKERGIGTG  321 (379)
T ss_pred             HHHHHCCCCCc
Confidence            99999999765

>PRK14012 cysteine desulfurase; Provisional

Probab=99.23  E-value=3.7e-10  Score=111.27  Aligned_cols=228  Identities=15%  Similarity=0.129  Sum_probs=142.2

Q ss_pred             ccCCCCCHHHHHHHhhhhh--hccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHH
Q psy10669         37 ASENFTSLAVLECLGSCLQ--NKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVC  113 (337)
Q Consensus        37 asen~~~p~V~~a~~~~l~--~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~  113 (337)
                      ++--.+++.|.+++...+.  +.|  ++++++.+.......+.-..+++.+++++|+++.    .+.+++| |.|+..++
T Consensus        10 a~~~~~~~~v~~a~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~----~v~~~~g~t~al~~~l   83 (404)
T PRK14012         10 SATTPVDPRVAEKMMPYLTMDGTF--GNPASRSHRFGWQAEEAVDIARNQIADLIGADPR----EIVFTSGATESDNLAI   83 (404)
T ss_pred             cCCCCCCHHHHHHHHHHHHhcccC--cCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcC----eEEEeCCHHHHHHHHH
Confidence            4445779999999987655  333  5565543322222223333456789999999763    4666655 77866555


Q ss_pred             HhhC----Cc--------------------------------------------ccc---cccEEEEcCcc--cccccCh
Q psy10669        114 EKAL----PT--------------------------------------------NNA---RFDFLSSGTTC--YSRCLDY  140 (337)
Q Consensus       114 ~aLl----~~--------------------------------------------~~a---~pklII~~~S~--~~~~~d~  140 (337)
                      .++.    ++                                            +.+   ++++|++.+..  .++..|+
T Consensus        84 ~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~~  163 (404)
T PRK14012         84 KGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQSNGIIDLEKLEAAMRDDTILVSIMHVNNEIGVIQDI  163 (404)
T ss_pred             HHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccCCCCcCCHHHHHHhcCCCCEEEEEECcCCCccchhhH
Confidence            6653    32                                            111   26788776433  4789999


Q ss_pred             HHHHHHhhhcCCeEEEeccccccccc---------eeeee-c----cCC--chhhh-hHHHHHhhccCC------CCCCC
Q psy10669        141 ARFRQICDETDSIMFADMSHISGLIA---------GVKGV-T----KTG--EKILY-DYEEKINNAVFP------SLQGG  197 (337)
Q Consensus       141 ~~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T-~----~~G--g~i~~-~l~~~i~~~~~p------~~~g~  197 (337)
                      ++|.++|+++|+++++|+||++|.+.         .++++ +    +.|  ++++. +...++.+....      ...|+
T Consensus       164 ~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~gp~g~G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt  243 (404)
T PRK14012        164 AAIGEICRERGIIFHVDAAQSVGKVPIDLSKLKVDLMSFSAHKIYGPKGIGALYVRRKPRVRLEAQMHGGGHERGMRSGT  243 (404)
T ss_pred             HHHHHHHHHcCCEEEEEcchhcCCcccCcccCCCCEEEEehhhccCCCceEEEEEecCCCCCCCceecCCCccCCccCCC
Confidence            99999999999999999999998775         12222 2    223  34444 322222221111      22578


Q ss_pred             CcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-CCCEEecCC--CCCeEEEEEecCCCcchHHHHHHHhh
Q psy10669        198 PHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-RGYHVVTGG--TDVHLILIDLRKNKLTGSKVELVLEE  273 (337)
Q Consensus       198 ~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~G~~v~~~~--t~~h~v~V~~~~~~~~~~~~~~~L~~  273 (337)
                      ++.+.++++..++..+. ...++..++..++++++.+.|.+ .++.+.+..  ...|...+.+...  +..++...|.+
T Consensus       244 ~~~~~~~~l~~al~~~~-~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~  319 (404)
T PRK14012        244 LPTHQIVGMGEAARIAK-EEMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRVPGNLNVSFNYV--EGESLIMALKD  319 (404)
T ss_pred             cCHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCEEEEEEeCc--CHHHHHHhCCC
Confidence            89999999998887764 45667788888999999998877 466665421  2234444544422  23455555543

>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase

Probab=99.22  E-value=7.9e-10  Score=108.10  Aligned_cols=196  Identities=16%  Similarity=0.114  Sum_probs=126.8

Q ss_pred             chHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhh-CCc-------------------------------
Q psy10669         72 QFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKA-LPT-------------------------------  119 (337)
Q Consensus        72 ~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aL-l~~-------------------------------  119 (337)
                      ....++|    +.++++||.++     ++.++||+.|+..++.++ +++                               
T Consensus        29 ~~~~~le----~~la~~~g~~~-----~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~~~~~~~~~~~~~G~~~~~~~~~   99 (380)
T TIGR03588        29 PTVPAFE----EALAEYVGAKY-----AVAFNSATSALHIACLALGVGPGDRVWTTPITFVATANCALYCGAKVDFVDID   99 (380)
T ss_pred             hhHHHHH----HHHHHHHCCCe-----EEEEcCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHHHHcCCEEEEEecC
Confidence            3356676    57899999986     577889999988888888 543                               


Q ss_pred             -------------cc-----ccccEEEEcCcccccccChHHHHHHhhhcCCeEEEecccccccc-----------c--ee
Q psy10669        120 -------------NN-----ARFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLI-----------A--GV  168 (337)
Q Consensus       120 -------------~~-----a~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli-----------~--g~  168 (337)
                                   .+     .++++|++.+ .++...|+++|.++|+++|+++++|++|+.|..           +  ++
T Consensus       100 ~~~~~~d~~~l~~~i~~~~~~~t~~v~~~~-~~G~~~~~~~i~~l~~~~~~~lI~D~a~a~g~~~~~~~~g~~~~~d~~~  178 (380)
T TIGR03588       100 PDTGNIDEDALEKKLAAAKGKLPKAIVPVD-FAGKSVDMQAIAALAKKHGLKIIEDASHALGAEYGGKPVGNCRYADATV  178 (380)
T ss_pred             CCcCCcCHHHHHHHhhcccCCCceEEEEeC-CCCccCCHHHHHHHHHHcCCEEEEECCCcccCccCCEeCCCccccceEE
Confidence                         11     1257777653 468889999999999999999999999998852           1  22


Q ss_pred             eeec--c-----CCchhhh---hHHHHHhhccCCCC---------------------CC-CCcHHHHHHHHHHHHHHhch
Q psy10669        169 KGVT--K-----TGEKILY---DYEEKINNAVFPSL---------------------QG-GPHNHAIGAIATAMLQAQSD  216 (337)
Q Consensus       169 ~~T~--~-----~Gg~i~~---~l~~~i~~~~~p~~---------------------~g-~~~~~~iaala~a~~e~~~~  216 (337)
                      .|++  |     .||++++   ++.++++.....+.                     .| +..+..+. .+.++.++  .
T Consensus       179 ~S~~~~K~~~~~~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~-aa~g~~qL--~  255 (380)
T TIGR03588       179 FSFHPVKIITTAEGGAVTTNDEELAERMRLLRSHGITKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQ-AALGLSQL--K  255 (380)
T ss_pred             EecCCCCcccccCceEEEECCHHHHHHHHHHHHCCCCCCcccccccccCcceeeeeccccccCccHHH-HHHHHHHH--H
Confidence            3333  2     4787765   35554432111010                     01 11112222 12222333  2


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhC-CCEEecC--C--CCCeEEEEEecC-CCcchHHHHHHHhhcCceecc
Q psy10669        217 EFKSYQAQVKANASHLSDEMIKR-GYHVVTG--G--TDVHLILIDLRK-NKLTGSKVELVLEEIAIACNK  280 (337)
Q Consensus       217 ~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~--~--t~~h~v~V~~~~-~~~~~~~~~~~L~~~gI~v~~  280 (337)
                      .+++..++-.+|++++.+.|.+. ++.+...  +  ...+..+|.+.. .+.+..++.+.|.+.||.++.
T Consensus       256 ~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~r~~l~~~L~~~gI~~~~  325 (380)
T TIGR03588       256 KLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHLYPILLDQEFGCTRKEVFEALRAAGIGVQV  325 (380)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEEEEEEEEECCcCCCCHHHHHHHHHHCCCCccc
Confidence            46788889999999999999884 3443321  1  123666776654 455788899999999998763

This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.

>PLN03032 serine decarboxylase; Provisional

Probab=99.22  E-value=1.8e-09  Score=105.67  Aligned_cols=237  Identities=14%  Similarity=0.110  Sum_probs=150.7

Q ss_pred             CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCC-CcceeecCCCchhHHHHHHhhC---
Q psy10669         42 TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQ-WGCNVQPYSGSPANFAVCEKAL---  117 (337)
Q Consensus        42 ~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~-~~~~v~~~Sgt~AN~~v~~aLl---  117 (337)
                      .++.+.+++...+.+.+  |+|++. +.-.....++|..+++.++++||+++.+ ||  +..++||.||+..+.+..   
T Consensus        35 ~~~~~~~~~~~~~~~~~--gnP~s~-~~~g~~a~~~e~~v~~~ia~llg~~~~~~~G--~fTsGGTEaNl~al~~ar~~~  109 (374)
T PLN03032         35 FDYGELSQLMKYSINNL--GDPFIE-SNYGVHSRQFEVGVLDWFARLWELEKDEYWG--YITTCGTEGNLHGILVGREVF  109 (374)
T ss_pred             cChHHHHHHHHhcccCC--CCCccc-CCCCccHHHHHHHHHHHHHHHhCCCCccCCE--EEeCchHHHHHHHHHHHHHhC
Confidence            46567888877665543  788774 3323456789999999999999998653 32  333444999876555421   


Q ss_pred             Cc--------------------------------------cc--c------cccEEEEc--CcccccccChHHHHHHhhh
Q psy10669        118 PT--------------------------------------NN--A------RFDFLSSG--TTCYSRCLDYARFRQICDE  149 (337)
Q Consensus       118 ~~--------------------------------------~~--a------~pklII~~--~S~~~~~~d~~~l~eia~~  149 (337)
                      +.                                      .+  +      +|.+|+++  .+..+...|+++|.+||++
T Consensus       110 ~~~~vi~s~~~H~Sv~kaa~~lg~~~~~V~~d~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idpi~eI~~i~~~  189 (374)
T PLN03032        110 PDGILYASRESHYSVFKAARMYRMEAVKVPTLPSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDDLDRILRILKE  189 (374)
T ss_pred             CCcEEEeCCCceeHHHHHHHHcCCCCeEeeeCCCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCCHHHHHHHHHH
Confidence            10                                      01  0      15577774  3446899999999999999


Q ss_pred             cC-----CeEEEeccccccccce---------------ee-eec-----cCC-chhhh--hHHHHHhhc------cCCCC
Q psy10669        150 TD-----SIMFADMSHISGLIAG---------------VK-GVT-----KTG-EKILY--DYEEKINNA------VFPSL  194 (337)
Q Consensus       150 ~g-----a~l~vD~AH~~Gli~g---------------~~-~T~-----~~G-g~i~~--~l~~~i~~~------~~p~~  194 (337)
                      +|     ++++||+|++.|.+..               ++ +.|     |+| |+++.  .+.+.+...      --+.+
T Consensus       190 ~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~~~vDSis~s~HK~~g~P~g~G~ll~r~~~~~~~~~~~~Yl~~~d~ti  269 (374)
T PLN03032        190 LGYTEDRFYIHCDGALFGLMMPFVSRAPEVTFRKPIGSVSVSGHKFLGCPMPCGVALTRKKHVKALSQNVEYLNSRDATI  269 (374)
T ss_pred             hCCCCCCeeEEEEccchhhhhhccCCCcccCCCcCCcEEEECcccccCCCcCeEEEEEEchhhHhhccCCcccCCCCCcc
Confidence            96     5899999999988761               12 223     234 55543  232222110      12344


Q ss_pred             CCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhc
Q psy10669        195 QGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEI  274 (337)
Q Consensus       195 ~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~  274 (337)
                      .|+-+....+++-.+++.+-...|.+..++.++++++|.+.|.+.|+.+..   +.....|.++... + ..   ..++.
T Consensus       270 ~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~---~p~~~~V~f~~~~-~-~~---~~~~w  341 (374)
T PLN03032        270 MGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEAGLTCRL---NELSSTVVFERPM-D-EA---FIKKW  341 (374)
T ss_pred             cCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEE---CCCceEEEEcCCC-c-Hh---Hhhee
Confidence            566555666777777777767788999999999999999999999999875   2333445555542 1 11   11223


Q ss_pred             CceeccCcccch-hhhhHh
Q psy10669        275 AIACNKNTGISL-AAEIQA  292 (337)
Q Consensus       275 gI~v~~~~giri-g~~~~t  292 (337)
                      .+.+.++ ++|| -|+..|
T Consensus       342 ~l~~~~~-~~hi~vm~~~~  359 (374)
T PLN03032        342 QLACEGD-IAHVVVMPNVT  359 (374)
T ss_pred             eecccCC-EEEEEECCCCC
Confidence            3333332 7777 456665

>TIGR01364 serC_1 phosphoserine aminotransferase

Probab=99.21  E-value=3e-09  Score=103.25  Aligned_cols=235  Identities=16%  Similarity=0.119  Sum_probs=144.5

Q ss_pred             CCHHHHHHHhhhhhhccCCCCCCCcCcCccchH---HHHHHHHHHHHHhhcCCCCCCCcceeec--CCCchhHHHHHHhh
Q psy10669         42 TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFI---DEIEIVAQQRSLKAFNLDPEQWGCNVQP--YSGSPANFAVCEKA  116 (337)
Q Consensus        42 ~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~---~~lE~~~~~~~a~lfg~~~~~~~~~v~~--~Sgt~AN~~v~~aL  116 (337)
                      +|..|++++...+.+ |.  +.|+..+.-++.-   .++-..++++++++|+.+.. |  .|.+  .|||.|+-++...+
T Consensus         3 ~p~~v~~~~~~~~~~-~~--~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~-~--~v~~~~gsgT~a~ea~~~nl   76 (349)
T TIGR01364         3 LPEEVLEQAQKELLN-FN--GTGMSVMEISHRSKEFEAVANEAESDLRELLNIPDN-Y--EVLFLQGGATGQFAAVPLNL   76 (349)
T ss_pred             CCHHHHHHHHHHHhC-cc--CCCccccccCCCchHHHHHHHHHHHHHHHHhCCCCC-c--eEEEEcCCchHHHHHHHHhc
Confidence            688999999877553 33  4444444333222   25556678899999997432 2  3433  45688988888888


Q ss_pred             CCc-----------------c---------------------------cc---cccEEEEcC--cccccccChHHHHHHh
Q psy10669        117 LPT-----------------N---------------------------NA---RFDFLSSGT--TCYSRCLDYARFRQIC  147 (337)
Q Consensus       117 l~~-----------------~---------------------------~a---~pklII~~~--S~~~~~~d~~~l~eia  147 (337)
                      +++                 +                           ..   ++++|.+++  ++.+...|     +++
T Consensus        77 ~~~~~~~l~i~~G~fg~r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~th~ETstGv~~~-----~l~  151 (349)
T TIGR01364        77 LAEGKVADYIVTGAWSKKAAKEAKKYGVVNVVASGKEGNYTKIPDPSTWEISEDAAYVHYCANETIHGVEFR-----ELP  151 (349)
T ss_pred             CCCCCeEEEEECCHHHHHHHHHHHHhCCcEEEeccccCCCCCCCCHHhcCCCCCCCEEEEcCCCCcccEecc-----eec
Confidence            643                 0                           00   145555553  33344333     778


Q ss_pred             hhcCCeEEEeccccccccc------e-ee-eec----cCC-chhhh--hHHHHHhhcc-----------CCCCCCCCcHH
Q psy10669        148 DETDSIMFADMSHISGLIA------G-VK-GVT----KTG-EKILY--DYEEKINNAV-----------FPSLQGGPHNH  201 (337)
Q Consensus       148 ~~~ga~l~vD~AH~~Gli~------g-~~-~T~----~~G-g~i~~--~l~~~i~~~~-----------~p~~~g~~~~~  201 (337)
                      +.++++++||+++++|...      + +. +.+    |.| |++..  ++.+++++..           .....+||+.+
T Consensus       152 ~~~~~l~iVDavss~g~~~id~~~~d~~~~ssqK~lgP~Glg~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~  231 (349)
T TIGR01364       152 DVKNAPLVADMSSNILSRPIDVSKFGLIYAGAQKNIGPAGLTVVIVRKDLLGRASRITPSMLNYKIHAENDSMYNTPPTF  231 (349)
T ss_pred             ccCCCeEEEEccccccCccCCHHHccEEEEecccccCCCceEEEEECHHHHhhcccCCCCcchHHHHHhcCCCCCCCcHH
Confidence            8889999999999999998      2 22 332    345 54432  3333222110           01224799999


Q ss_pred             HHHHHHHHHHHHhch-hhHHHHHHHHHHHHHHHHHHHhC-CCEEecCC--CCC-eEEEEEecCCCcchHHHHHHHhhcCc
Q psy10669        202 AIGAIATAMLQAQSD-EFKSYQAQVKANASHLSDEMIKR-GYHVVTGG--TDV-HLILIDLRKNKLTGSKVELVLEEIAI  276 (337)
Q Consensus       202 ~iaala~a~~e~~~~-~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~--t~~-h~v~V~~~~~~~~~~~~~~~L~~~gI  276 (337)
                      .+.++..+++++.+. ..+...++..++++++.+.|.+. |+......  ..+ .++.+.+....++ .+..+.+.+.||
T Consensus       232 ~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~~~~~-~~~~~~~~~~Gi  310 (349)
T TIGR01364       232 AIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNEELE-KRFLKEAEERGL  310 (349)
T ss_pred             HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecCChhHh-HHHHHHHHHCCC
Confidence            999999999999876 58999999999999999999998 66444211  112 2344443332222 344456667898


Q ss_pred             eeccCc----ccchhh
Q psy10669        277 ACNKNT----GISLAA  288 (337)
Q Consensus       277 ~v~~~~----girig~  288 (337)
                      .+..-.    .+|++.
T Consensus       311 ~~~~~~~~~g~vRvS~  326 (349)
T TIGR01364       311 VSLKGHRSVGGMRASI  326 (349)
T ss_pred             cccCCccccCeeEEEC
Confidence            554321    456553

This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).

>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed

Probab=99.21  E-value=2.8e-09  Score=104.83  Aligned_cols=229  Identities=11%  Similarity=0.089  Sum_probs=142.3

Q ss_pred             CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhC-----
Q psy10669         43 SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL-----  117 (337)
Q Consensus        43 ~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl-----  117 (337)
                      +|.|.+++...+. ++..++   +.+. +....++|    ++++++++.+.     .+.++|||.||.+++..+.     
T Consensus        59 ~~~i~~a~~~~~~-~~~~~~---~~~~-~~~~~~l~----~~l~~~~~~~~-----~~~~~SGs~A~e~al~~a~~~~~~  124 (401)
T PRK00854         59 HPKILAAMVEQAG-RLTLTS---RAFR-NDQLAPLY----EELAALTGSHK-----VLPMNSGAEAVETAIKAVRKWGYE  124 (401)
T ss_pred             CHHHHHHHHHHHh-hccccc---cccC-CHHHHHHH----HHHHhhCCCCE-----EEEeCCcHHHHHHHHHHHHHHHHh
Confidence            9999999987654 443322   2222 34445565    57788998764     6888999999988887762     


Q ss_pred             ------C-c---------------------------------------------ccc-----cccEEEEcCcccc---cc
Q psy10669        118 ------P-T---------------------------------------------NNA-----RFDFLSSGTTCYS---RC  137 (337)
Q Consensus       118 ------~-~---------------------------------------------~~a-----~pklII~~~S~~~---~~  137 (337)
                            + .                                             .+.     ++++||+.+ .++   ..
T Consensus       125 ~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~aii~e~-~~~~~G~~  203 (401)
T PRK00854        125 VKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVPFGDAEALEAAITPNTVAFLVEP-IQGEAGVI  203 (401)
T ss_pred             ccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeCCCCHHHHHHHhCCCeEEEEEcc-ccCCCCCc
Confidence                  1 1                                             000     146777753 332   33


Q ss_pred             cC----hHHHHHHhhhcCCeEEEecccc-ccccc--------ee----eeecc--CCch-----hhh--hHHHHHhhccC
Q psy10669        138 LD----YARFRQICDETDSIMFADMSHI-SGLIA--------GV----KGVTK--TGEK-----ILY--DYEEKINNAVF  191 (337)
Q Consensus       138 ~d----~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g~----~~T~~--~Gg~-----i~~--~l~~~i~~~~~  191 (337)
                      .|    +++|+++|+++|++|++|++|+ .|-.+        ++    ....|  .||+     +++  ++.+.+.+...
T Consensus       204 ~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~~~~~~g~~~D~~~~~K~l~gg~~~ig~v~~~~~~~~~l~~~~~  283 (401)
T PRK00854        204 IPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLLAEEHEGIEADVTLIGKALSGGFYPVSAVLSNSEVLGVLKPGQH  283 (401)
T ss_pred             CCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCchHhHHhhcCCCCCEEEecccccCCccCeEEEEEcHHHHhcccCCCC
Confidence            43    8899999999999999999997 33221        10    11112  1343     333  45555543323


Q ss_pred             CCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEec-CCCCCeEEEEEecCCCcchHHHHHH
Q psy10669        192 PSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVT-GGTDVHLILIDLRKNKLTGSKVELV  270 (337)
Q Consensus       192 p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~-~~t~~h~v~V~~~~~~~~~~~~~~~  270 (337)
                      ...++ .++...++...++..+.+   ....+++.++.++|.+.|++.++.... ......++.+.+.....+..++.+.
T Consensus       284 ~~t~~-~~~~~~aa~~a~L~~l~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~g~~~~i~~~~~~~~~~~~~~~  359 (401)
T PRK00854        284 GSTFG-GNPLACAVARAALKVLTE---EGMIENAAEMGAYFLEGLRSIRSNIVREVRGRGLMLAVELEPEAGGARQYCEA  359 (401)
T ss_pred             CCCCC-cCHHHHHHHHHHHHHHHH---cCHHHHHHHHHHHHHHHHHhhccCceEEEeccceEEEEEEecCchhHHHHHHH
Confidence            33343 466666666666665532   335788888999999999987655332 1245667777664433356777888


Q ss_pred             HhhcCceeccCc--ccchhhhh
Q psy10669        271 LEEIAIACNKNT--GISLAAEI  290 (337)
Q Consensus       271 L~~~gI~v~~~~--girig~~~  290 (337)
                      |.+.||.+....  .||+..+.
T Consensus       360 L~~~GV~v~~~~~~~lR~~p~~  381 (401)
T PRK00854        360 LKERGLLAKDTHDHTIRLAPPL  381 (401)
T ss_pred             HHHCCeEEecCCCCEEEEeCCc
Confidence            888899997532  67777553

>TIGR01788 Glu-decarb-GAD glutamate decarboxylase

Probab=99.19  E-value=1.1e-09  Score=109.11  Aligned_cols=232  Identities=12%  Similarity=0.057  Sum_probs=143.0

Q ss_pred             CCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCC--CCcceeecCCCchhHHHHHHhhC
Q psy10669         40 NFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPE--QWGCNVQPYSGSPANFAVCEKAL  117 (337)
Q Consensus        40 n~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~--~~~~~v~~~Sgt~AN~~v~~aLl  117 (337)
                      ..++|.+.+.+.+.+...+  |+|.+   .|..  .++|..+++.+++++|++.+  +. .-+..++||.||+..+.+..
T Consensus        51 t~~~p~~~~~~~~~l~~~~--~np~s---~~~~--~~le~~~~~~la~llg~~~~~~~~-~g~~TsGgTEAn~~al~~ar  122 (431)
T TIGR01788        51 TWMEPEARKLMDETINKNM--IDKDE---YPQT--AEIENRCVNMLADLWHAPAKDAEA-VGTSTIGSSEAIMLGGLAMK  122 (431)
T ss_pred             CCCCHHHHHHHHHHHhcCC--CCccc---CccH--HHHHHHHHHHHHHHhCCCCCCCCC-eEEEechHHHHHHHHHHHHH
Confidence            4558899999987765432  55544   2332  38999999999999999721  11 01112445899765554321


Q ss_pred             ---------------Cc--------------------------------------ccc-----cccEEEEcCcc--cccc
Q psy10669        118 ---------------PT--------------------------------------NNA-----RFDFLSSGTTC--YSRC  137 (337)
Q Consensus       118 ---------------~~--------------------------------------~~a-----~pklII~~~S~--~~~~  137 (337)
                                     ++                                      .+.     .|.+|+++..+  .+..
T Consensus       123 ~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~d~~~~~vd~~~L~~~i~~~t~lV~~t~g~t~tG~i  202 (431)
T TIGR01788       123 WRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPMDPGRYVIDPEQVVEAVDENTIGVVCILGTTYTGEY  202 (431)
T ss_pred             HHHHHHHHhcCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEecCCCceeeCHHHHHHHHhhCCeEEEEEeCCCCCccc
Confidence                           11                                      011     15677776433  4799


Q ss_pred             cChHHHHHHhhhc------CCeEEEeccccccccc-------------e---eeee-cc-----CC-chhhh-h---HHH
Q psy10669        138 LDYARFRQICDET------DSIMFADMSHISGLIA-------------G---VKGV-TK-----TG-EKILY-D---YEE  184 (337)
Q Consensus       138 ~d~~~l~eia~~~------ga~l~vD~AH~~Gli~-------------g---~~~T-~~-----~G-g~i~~-~---l~~  184 (337)
                      .|+++|.++|+++      |++++||+||+.+.+.             +   ++.. ||     +| |+++. +   +.+
T Consensus       203 dpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~~~~~DSis~s~HK~~~~P~g~G~l~~r~~~~l~~  282 (431)
T TIGR01788       203 EDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFRLPRVKSINVSGHKYGLVYPGVGWVIWRDEEALPE  282 (431)
T ss_pred             CCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcCCCCceEEEECchhccCCCCCcEEEEEeChHHcch
Confidence            9999999999999      9999999999976642             1   2222 32     34 55442 2   222


Q ss_pred             HHhhc---c-----CCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEE
Q psy10669        185 KINNA---V-----FPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILI  255 (337)
Q Consensus       185 ~i~~~---~-----~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V  255 (337)
                      .+...   +     -+.+.++-.....++.-..++.+-...+++..++.++++++|+++|.+. +|++++.....+++..
T Consensus       283 ~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~~~~iV~F  362 (431)
T TIGR01788       283 ELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGSGIPLVAF  362 (431)
T ss_pred             hheecccccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCCCceEEEE
Confidence            22210   0     0112222222234444445555545678899999999999999999985 5999863223444443


Q ss_pred             EecC---CCcchHHHHHHHhhcCceec
Q psy10669        256 DLRK---NKLTGSKVELVLEEIAIACN  279 (337)
Q Consensus       256 ~~~~---~~~~~~~~~~~L~~~gI~v~  279 (337)
                      .+..   .+++..++.+.|.+.|+.++
T Consensus       363 r~~~~~~~~~~~~~l~~~L~~~G~~~~  389 (431)
T TIGR01788       363 KLKDDADPGYTLYDLSHRLRERGWIVP  389 (431)
T ss_pred             EeCCCCCCCcCHHHHHHHHHHCCCccc
Confidence            3332   13567788999999999754

This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).

>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]

Probab=99.18  E-value=1.3e-09  Score=103.75  Aligned_cols=235  Identities=16%  Similarity=0.156  Sum_probs=146.5

Q ss_pred             eeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHH
Q psy10669         35 LIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV  112 (337)
Q Consensus        35 l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v  112 (337)
                      -+.|-|+.  +|+++++|...  + +    .+..-|+--+...++|    ++++++||.+.     .+..+|||+||+.+
T Consensus         3 ~f~SDn~~g~~~~m~eam~~a--~-~----~~~~~YG~D~~~~~~e----~~~ae~~g~~a-----~~Fv~sGT~aN~la   66 (342)
T COG2008           3 DFRSDNVAGPTPEMREALAAA--N-A----VGDDVYGEDPTTNALE----QRIAELFGKEA-----ALFVPSGTQANQLA   66 (342)
T ss_pred             ccccCccCCCCHHHHHHHHhc--c-c----cCCCCCCCCHHHHHHH----HHHHHHhCCce-----EEEecCccHHHHHH
Confidence            35688888  99999999753  2 1    3445566566778888    58899999953     57779999999999


Q ss_pred             HHhhCCc--------------------------------------------c--cc--------cccEEEEc-Ccccccc
Q psy10669        113 CEKALPT--------------------------------------------N--NA--------RFDFLSSG-TTCYSRC  137 (337)
Q Consensus       113 ~~aLl~~--------------------------------------------~--~a--------~pklII~~-~S~~~~~  137 (337)
                      +.+.++|                                            +  +.        +|.+++.+ +..++..
T Consensus        67 l~~~~~~~~~vi~~~~aHi~~~E~Ga~~~~~~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtV  146 (342)
T COG2008          67 LAAHCQPGESVICHETAHIYTDECGAPEFFGGGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTV  146 (342)
T ss_pred             HHHhcCCCCeEEEeccccceecccCcHHHHcCCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCcee
Confidence            9999876                                            1  11        15555554 4446777


Q ss_pred             cChHHHH---HHhhhcCCeEEEeccccc-cccc----------e---e--eeec----cCCchhhh--hHHHHHhhc--c
Q psy10669        138 LDYARFR---QICDETDSIMFADMSHIS-GLIA----------G---V--KGVT----KTGEKILY--DYEEKINNA--V  190 (337)
Q Consensus       138 ~d~~~l~---eia~~~ga~l~vD~AH~~-Gli~----------g---~--~~T~----~~Gg~i~~--~l~~~i~~~--~  190 (337)
                      .+.++|.   ++|+++|..|.+|.|-.. ++++          +   +  ++|.    +-|.+++.  ++.++.+..  .
T Consensus       147 y~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg~~~~~~~~~~D~v~~~~tK~g~~~~gAiv~gn~~~~~~a~~~rK~  226 (342)
T COG2008         147 YPLDELEAISAVCKEHGLPLHMDGARLANALVALGVALKTIKSYVDSVSFCLTKGGGAPVGAIVFGNRDFAKRARRWRKR  226 (342)
T ss_pred             cCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcCCCHHHHHhhCCEEEEecccCCcceeeeEEEcCHHHHHHHHHHHHH
Confidence            7777655   789999999999999765 2222          1   2  2231    23445544  455533321  1


Q ss_pred             CCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHH--HHHHHHHHH-hCCCEEecCCCCCeEEEEEecCCCcchHHH
Q psy10669        191 FPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKAN--ASHLSDEMI-KRGYHVVTGGTDVHLILIDLRKNKLTGSKV  267 (337)
Q Consensus       191 ~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~n--a~~l~~~L~-~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~  267 (337)
                      ..+.  -...-.+|   ++....++ +.-++.....+|  |+.|+++|. ..|+++... +++-++.+++....++....
T Consensus       227 ~Ggl--~~k~r~la---A~~~~~l~-~~~~~~~~~Han~mA~~La~~~~~~~G~~~~~~-~~tN~vf~~l~~~~i~~l~~  299 (342)
T COG2008         227 AGGL--MRKARFLA---AQGLYALE-DDVWRLAADHANAMAARLAEGLEAKPGVKLAFP-VETNMVFVRLPESAIEALRL  299 (342)
T ss_pred             hccc--HhhhhHHH---HHHHHHHh-ccHHHHHHHHHHHHHHHHHHhhhhcCCceeccC-CcccEEEEECChHHHHHHHh
Confidence            1211  11112222   23333333 223566667777  999999999 569999865 89999999987655444444


Q ss_pred             HHHHhhcCceeccCc-ccchhhhhHh
Q psy10669        268 ELVLEEIAIACNKNT-GISLAAEIQA  292 (337)
Q Consensus       268 ~~~L~~~gI~v~~~~-girig~~~~t  292 (337)
                      ...+...|+....-. -+|+.|..-|
T Consensus       300 ~~~~~~~~~~~~~~~~~vRfvts~a~  325 (342)
T COG2008         300 AGALFYRGVLIGAHGEIVRFVTSWAT  325 (342)
T ss_pred             hchhheeeeeccCCCceEEEEeeccC
Confidence            444444455444321 2666655443

>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional

Probab=99.17  E-value=7.5e-09  Score=100.89  Aligned_cols=246  Identities=13%  Similarity=0.056  Sum_probs=150.4

Q ss_pred             ceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCc----CccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCch
Q psy10669         32 GIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYY----GGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSP  107 (337)
Q Consensus        32 ~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~----~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~  107 (337)
                      .+.+.|.---+|+.|++|+...+.+ |.  +.|+..+    ...++ .++-..++++++++||.+.+++ +-+...||+.
T Consensus         4 ~~l~~pGP~~~p~~V~~a~~~~~~~-~~--~~~~g~~~~~hr~~~f-~~~~~~~~~~l~~l~~~~~~~~-v~~~~gsgt~   78 (360)
T PRK05355          4 VYNFSAGPAMLPEEVLEQAQQELLD-WN--GSGMSVMEISHRSKEF-EAVAEEAEADLRELLNIPDNYK-VLFLQGGASL   78 (360)
T ss_pred             eeeccCCCCCCCHHHHHHHHHHhhc-cc--cCCccccccCCCCHHH-HHHHHHHHHHHHHHhCCCCCcE-EEEEcCCchH
Confidence            3567777778899999999876432 21  2232222    22222 3555567889999999733212 2233355578


Q ss_pred             hHHHHHHhhCCc--------------------------------------------c-cc--cccEEEEcC--ccccccc
Q psy10669        108 ANFAVCEKALPT--------------------------------------------N-NA--RFDFLSSGT--TCYSRCL  138 (337)
Q Consensus       108 AN~~v~~aLl~~--------------------------------------------~-~a--~pklII~~~--S~~~~~~  138 (337)
                      |+-+++..++.+                                            + ..  ++++|.+.+  ++.+...
T Consensus        79 ~~Ea~~~nl~~~g~~~l~i~~G~fg~r~~~~a~~~g~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~V~~th~eTstGv~~  158 (360)
T PRK05355         79 QFAMVPMNLLGGGKKADYVDTGSWSKKAIKEAKKYGEVNVAASSEDDGFTYIPPLDEWQLSDDAAYVHYTSNETIDGTEF  158 (360)
T ss_pred             HHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCceEEecccccCCCCCCChhhccCCCCCCEEEEccCCCcceEec
Confidence            888888888653                                            1 01  167777764  4445555


Q ss_pred             ChHHHHHHhhhcCCeEEEeccccccccc------e-eeee-c----cCC-chhh-h-hHHHHHhhc----------cCC-
Q psy10669        139 DYARFRQICDETDSIMFADMSHISGLIA------G-VKGV-T----KTG-EKIL-Y-DYEEKINNA----------VFP-  192 (337)
Q Consensus       139 d~~~l~eia~~~ga~l~vD~AH~~Gli~------g-~~~T-~----~~G-g~i~-~-~l~~~i~~~----------~~p-  192 (337)
                      |  +|.+|   +|++++||++|++|...      + +.++ +    |.| |++. . ++.+++++.          ..+ 
T Consensus       159 ~--~i~~i---~g~l~vVDavss~g~~~idv~~~d~~~~ssqK~lgP~Glg~l~~s~~~l~~~~~~~~~~~~~~~~~~~~  233 (360)
T PRK05355        159 H--ELPDT---GDVPLVADMSSDILSRPIDVSKFGLIYAGAQKNIGPAGLTIVIVREDLLGRALPSIPSMLDYKTHADND  233 (360)
T ss_pred             C--ccccc---CCCcEEEEcCccccCccCCHHHccEEEEeccccccCCceEEEEECHHHHhhcccCCChHHHHHHHHhcC
Confidence            2  34444   79999999999999988      2 2222 2    334 4443 2 333333321          011 


Q ss_pred             CCCCCCcHHHHHHHHHHHHHHhch-hhHHHHHHHHHHHHHHHHHHHhCCCE-EecC-CCCC-eEEEEEecCCCcchHHHH
Q psy10669        193 SLQGGPHNHAIGAIATAMLQAQSD-EFKSYQAQVKANASHLSDEMIKRGYH-VVTG-GTDV-HLILIDLRKNKLTGSKVE  268 (337)
Q Consensus       193 ~~~g~~~~~~iaala~a~~e~~~~-~~~~y~~~v~~na~~l~~~L~~~G~~-v~~~-~t~~-h~v~V~~~~~~~~~~~~~  268 (337)
                      ...+||+.+.+.|+..+++++.+. ..+.+.++..++++++.+.|++.|+- .+.. ...+ .++.+.+... ....+.-
T Consensus       234 ~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~v~sf~~~~~-~~~~~~~  312 (360)
T PRK05355        234 SMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPEDRSRMNVPFTLADE-ELDKKFL  312 (360)
T ss_pred             CccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCChhhcCCcEEEEEcCCh-HHHHHHH
Confidence            124899999999999999999876 57899999999999999999998852 2111 1112 2333333221 2223444


Q ss_pred             HHHhhcCceeccCc----ccchhh
Q psy10669        269 LVLEEIAIACNKNT----GISLAA  288 (337)
Q Consensus       269 ~~L~~~gI~v~~~~----girig~  288 (337)
                      +.+.+.||.+..-.    .+|++.
T Consensus       313 ~~~~~~Gi~~~~~~~~~g~vRiS~  336 (360)
T PRK05355        313 AEAKAAGLVGLKGHRSVGGMRASI  336 (360)
T ss_pred             HHHHHCCCcccCCCCccCcEEEEC
Confidence            55666799874321    466654

>TIGR03246 arg_catab_astC succinylornithine transaminase family

Probab=99.17  E-value=6.2e-09  Score=102.60  Aligned_cols=237  Identities=16%  Similarity=0.108  Sum_probs=141.0

Q ss_pred             cceeeecc---CCCC---CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCC
Q psy10669         31 NGIELIAS---ENFT---SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYS  104 (337)
Q Consensus        31 ~~i~l~as---en~~---~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~S  104 (337)
                      +...-+.|   ++++   +|.|.+|+...+.+-+..+   ..+  .+....+++    ++++++++.+.     ...++|
T Consensus        35 ~~ylD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~---~~~--~~~~~~~la----~~L~~~~~~~~-----~~f~~S  100 (397)
T TIGR03246        35 KEYIDFAGGIAVNALGHAHPELVKALIEQADKLWHIG---NGY--TNEPVLRLA----KKLVDATFADK-----VFFCNS  100 (397)
T ss_pred             CEEEECCcCHhhccCCCCCHHHHHHHHHHHHhccccc---Ccc--CCHHHHHHH----HHHHhhCCCCE-----EEEeCC
Confidence            34444445   5666   9999999987655322111   111  123334444    57788887653     577789


Q ss_pred             CchhHHHHHHhh---------CCc------------------------------------------------ccc---cc
Q psy10669        105 GSPANFAVCEKA---------LPT------------------------------------------------NNA---RF  124 (337)
Q Consensus       105 gt~AN~~v~~aL---------l~~------------------------------------------------~~a---~p  124 (337)
                      |+.||.+++...         .++                                                +..   +.
T Consensus       101 GseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~  180 (397)
T TIGR03246       101 GAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPYNDLAAAKALISDKT  180 (397)
T ss_pred             cHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCCCCHHHHHHHhccCe
Confidence            999999888865         121                                                000   13


Q ss_pred             cEEEEcCccccccc-------ChHHHHHHhhhcCCeEEEeccccccccc--e---------e----eeecc--CCchhhh
Q psy10669        125 DFLSSGTTCYSRCL-------DYARFRQICDETDSIMFADMSHISGLIA--G---------V----KGVTK--TGEKILY  180 (337)
Q Consensus       125 klII~~~S~~~~~~-------d~~~l~eia~~~ga~l~vD~AH~~Gli~--g---------~----~~T~~--~Gg~i~~  180 (337)
                      ++||+. ..+++.+       .+++|+++|+++|++||+|+.| .|+ +  |         +    .+.+|  .||+.++
T Consensus       181 aavi~E-pi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~-tG~-Gr~G~~~a~~~~gv~pDi~t~~K~lggG~pig  257 (397)
T TIGR03246       181 CAVIVE-PIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQ-TGV-GRTGELYAYMHYGVTPDILTSAKALGGGFPIG  257 (397)
T ss_pred             EEEEEe-cccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechh-hcC-CccccchhhhhcCCCCCEEEeehhhhCCccee
Confidence            567776 4665443       3667889999999999999999 666 2  1         1    11112  1444332


Q ss_pred             ------hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC--CEEecC-CCCCe
Q psy10669        181 ------DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG--YHVVTG-GTDVH  251 (337)
Q Consensus       181 ------~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G--~~v~~~-~t~~h  251 (337)
                            ++.+.+.......+++ .++...++..+++..+.+   ++..+++.++.++|.+.|++.+  +.+... .....
T Consensus       258 av~~~~~i~~~~~~~~~~~t~~-~~p~~~aaa~a~l~~~~~---~~l~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~G~  333 (397)
T TIGR03246       258 AMLTTTEIAAHLKVGTHGTTYG-GNPLACAVAGKVLDLVNT---PELLAGVKQRHDLFVDGLEKINARYNVFSEIRGKGL  333 (397)
T ss_pred             EEEEcHHHHHhccCCCcCCCCC-CCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhcCCCeEeeecCce
Confidence                  4555555433333443 566666666666655432   4678899999999999998854  332221 12334


Q ss_pred             EEEEEecCC-CcchHHHHHHHhhcCceeccCc--ccchhh
Q psy10669        252 LILIDLRKN-KLTGSKVELVLEEIAIACNKNT--GISLAA  288 (337)
Q Consensus       252 ~v~V~~~~~-~~~~~~~~~~L~~~gI~v~~~~--girig~  288 (337)
                      ++.+.+.+. ......+...|.+.||.+....  -||+..
T Consensus       334 ~~~i~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~~lR~~p  373 (397)
T TIGR03246       334 LIGAVLTEAYQGKAKQFVNAAAEEGVIALIAGPNVVRFAP  373 (397)
T ss_pred             EEEEEEcCchhhHHHHHHHHHHHCCeEEeecCCCEEEEeC
Confidence            555555431 1135567777888899987532  466653

Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.

>PRK10534 L-threonine aldolase; Provisional

Probab=99.16  E-value=2.6e-09  Score=102.26  Aligned_cols=221  Identities=15%  Similarity=0.194  Sum_probs=135.9

Q ss_pred             CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc--
Q psy10669         42 TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT--  119 (337)
Q Consensus        42 ~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~--  119 (337)
                      .||.+++++.....        +...|+......++|    +.+++++|.++     .+.+.+|+.++...+.+++.+  
T Consensus        12 p~~~~~~a~~~~~~--------~~~~Y~~~~~~~~L~----~~la~~~g~~~-----~~v~~~g~~a~~~~l~~~~~~gd   74 (333)
T PRK10534         12 PSRAMLEAMMAAPV--------GDDVYGDDPTVNALQ----DYAAELSGKEA-----ALFLPTGTQANLVALLSHCERGE   74 (333)
T ss_pred             CCHHHHHHHHhccC--------CCcccCCCHHHHHHH----HHHHHHhCCCe-----EEEeCchHHHHHHHHHHhcCCCC
Confidence            48999999854211        112243344556777    57789999886     467778888887777776543  


Q ss_pred             ----------------------------------------cc--c---------cccEEEEcCcccccccChHHHH---H
Q psy10669        120 ----------------------------------------NN--A---------RFDFLSSGTTCYSRCLDYARFR---Q  145 (337)
Q Consensus       120 ----------------------------------------~~--a---------~pklII~~~S~~~~~~d~~~l~---e  145 (337)
                                                              ++  +         ++++|++..-..+...|.+.|.   +
T Consensus        75 ~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~~G~v~~~~~l~~i~~  154 (333)
T PRK10534         75 EYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAAADGTLPLDKVAAKIKPDDIHFARTRLLSLENTHNGKVLPREYLKQAWE  154 (333)
T ss_pred             eeEEechhhhhHhcCCchHHhcCceEEeecCCCCCCCCHHHHHHhhcccCcCcccceEEEEecCCCCeecCHHHHHHHHH
Confidence                                                    00  0         2456666532346777777665   5


Q ss_pred             HhhhcCCeEEEecccccccc---c-----------eeeeec-c-----CCchhhh--hHHHHHhhccCCCCCCCCcHHH-
Q psy10669        146 ICDETDSIMFADMSHISGLI---A-----------GVKGVT-K-----TGEKILY--DYEEKINNAVFPSLQGGPHNHA-  202 (337)
Q Consensus       146 ia~~~ga~l~vD~AH~~Gli---~-----------g~~~T~-~-----~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~-  202 (337)
                      +|+++|++|++|+||..+-.   +           .+..|. |     .||++++  ++.+.+.....+... +...+. 
T Consensus       155 ~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~~~~~~~~~s~SK~~~~~~G~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~  233 (333)
T PRK10534        155 FTRERNLALHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKGLGTPVGSLLVGNRDYIKRARRWRKMTGG-GMRQAGI  233 (333)
T ss_pred             HHHHcCCeEEeeHHHHHHHHHHcCCCHHHHHhcCCEEEEEeEcCCCCcccceEEcCHHHHHHHHHHHHHhCC-chhhHHH
Confidence            78888999999999775321   1           122222 2     2555654  566666544333211 112212 


Q ss_pred             HHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCc
Q psy10669        203 IGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT  282 (337)
Q Consensus       203 iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~  282 (337)
                      .++.  ++..+ + +..++.++..++.++|.+.|.+.|+++..  ++++.+++.++.  .+..++.+.|.+.||.+.+..
T Consensus       234 ~~a~--~~~~l-~-~~~~~~~~~~~~r~~l~~~L~~~g~~~~~--~~~nfv~~~~~~--~~~~~~~~~l~~~gi~v~~~~  305 (333)
T PRK10534        234 LAAA--GLYAL-K-HNVARLQEDHDNAAWLAEQLREAGADVMR--QDTNMLFVRVGE--EQAAALGEYMRERNVLINASP  305 (333)
T ss_pred             HHHH--HHHHH-H-hhHHHHHHHHHHHHHHHHHHHhCCCccCC--CCceEEEEECCc--hhHHHHHHHHHHcCeeecCCc
Confidence            1222  22122 1 22356667778889999999999998865  578888888864  245677889999999998755


Q ss_pred             ccchhh
Q psy10669        283 GISLAA  288 (337)
Q Consensus       283 girig~  288 (337)
                      .+|+..
T Consensus       306 ~~rl~~  311 (333)
T PRK10534        306 IVRLVT  311 (333)
T ss_pred             eEEEEE
Confidence            556643

>cd06450 DOPA_deC_like DOPA decarboxylase family

Probab=99.15  E-value=2.6e-09  Score=102.37  Aligned_cols=204  Identities=11%  Similarity=0.036  Sum_probs=130.6

Q ss_pred             cCccchHHHHHHHHHHHHHhhcCCC-CCCCcceeecCCCchhHHHHHHhhCC---------------c------------
Q psy10669         68 YGGNQFIDEIEIVAQQRSLKAFNLD-PEQWGCNVQPYSGSPANFAVCEKALP---------------T------------  119 (337)
Q Consensus        68 ~~G~~~~~~lE~~~~~~~a~lfg~~-~~~~~~~v~~~Sgt~AN~~v~~aLl~---------------~------------  119 (337)
                      |.......++|+.+++.++++||.+ .+.+  .+..++||.||+.++.++..               +            
T Consensus        30 y~~~~~~~~le~~~~~~~~~~~g~~~~~~~--~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~  107 (345)
T cd06450          30 WDESPAATEMEAEVVNWLAKLFGLPSEDAD--GVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVS  107 (345)
T ss_pred             cccCchhHHHHHHHHHHHHHHhCCCCCCCC--EEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhH
Confidence            4455567789998889999999986 2212  34445558998777776520               1            


Q ss_pred             ----------------------------c--c-c------cccEEEEcC-c-ccccccChHHHHHHhhhcCCeEEEeccc
Q psy10669        120 ----------------------------N--N-A------RFDFLSSGT-T-CYSRCLDYARFRQICDETDSIMFADMSH  160 (337)
Q Consensus       120 ----------------------------~--~-a------~pklII~~~-S-~~~~~~d~~~l~eia~~~ga~l~vD~AH  160 (337)
                                                  +  + .      +|++|++.. + ..+...|+++|.++|+++|+++++|+||
T Consensus       108 ~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD~a~  187 (345)
T cd06450         108 VEKAAAYLDVKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDAAY  187 (345)
T ss_pred             HHHHHHHHhcCeEEeeeCCCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEechh
Confidence                                        0  0 1      245665553 2 3568889999999999999999999999


Q ss_pred             cccccce---------------eeeeccCCchhhhhHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHH
Q psy10669        161 ISGLIAG---------------VKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQV  225 (337)
Q Consensus       161 ~~Gli~g---------------~~~T~~~Gg~i~~~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v  225 (337)
                      ..|.+..               ++++.+|.              ..+....+.....++++..++..+....+++.+++.
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~--------------l~~p~g~g~~~~~~~~~~~~l~~l~~~g~~~~~~~~  253 (345)
T cd06450         188 GGFLLPFPEPRHLDFGIERVDSISVDPHKY--------------GLVPLGCSAVLVRALKLWATLRRFGRDGYGEHIDRI  253 (345)
T ss_pred             hHHHhhChhhHHHhcCccccCEEEEchhHh--------------hCCCcchHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence            9887541               11122220              000000000000155566666666556678999999


Q ss_pred             HHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCC---CcchHHHHHHHhhcCce-eccC-----cccchhh
Q psy10669        226 KANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKN---KLTGSKVELVLEEIAIA-CNKN-----TGISLAA  288 (337)
Q Consensus       226 ~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~---~~~~~~~~~~L~~~gI~-v~~~-----~girig~  288 (337)
                      .+++++|.+.|.+. |++++. ..+..++.+.+...   +.+..++.+.|.+.|+. +...     ..+||+.
T Consensus       254 ~~~~~~l~~~L~~~~~~~~~~-~~~~~iv~f~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~lRis~  325 (345)
T cd06450         254 VDLAKYLAELIRADPGFELLG-EPNLSLVCFRLKPSVKLDELNYDLSDRLNERGGWHVPATTLGGPNVLRFVV  325 (345)
T ss_pred             HHHHHHHHHHHhcCCCeEEec-CCceeEEEEEECCcchhhHHHHHHHHHHHhcCCEEEEeeEECCeEEEEEEe
Confidence            99999999999885 788764 34567777766543   35667888888887544 4321     1567754

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.

>PRK04366 glycine dehydrogenase subunit 2; Validated

Probab=99.14  E-value=1.2e-08  Score=103.27  Aligned_cols=234  Identities=10%  Similarity=0.057  Sum_probs=131.9

Q ss_pred             eccCCCCCHHHHHHHhhh--hhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHH-
Q psy10669         36 IASENFTSLAVLECLGSC--LQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV-  112 (337)
Q Consensus        36 ~asen~~~p~V~~a~~~~--l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v-  112 (337)
                      =...+..+|.+.+++.+.  +. .| ..|.......|.   .++....++.+++++|.+.    +.+...+|+.++... 
T Consensus        76 G~~~~~~~p~i~~~~~~~~~~~-~~-tpYq~e~~sqG~---lel~~~~~~~la~l~G~~~----~~l~~~~GA~a~~~~l  146 (481)
T PRK04366         76 GSCTMKYNPKINEKVARLPGFA-EL-HPLQPEETVQGA---LELMYELQEWLKEITGMDA----VTLQPAAGAHGELTGL  146 (481)
T ss_pred             cccCCCCCHHHHHHHHhCcchh-cC-CCCCChhhhhHH---HHHHHHHHHHHHHHhCCCc----eEEEeCcHHHHHHHHH
Confidence            335566799999988764  11 11 011000112222   2444555678999999985    577777777654432 


Q ss_pred             --HHh-hCC-------c------------------------------------ccc-----cccEEEEc-Ccccccc-cC
Q psy10669        113 --CEK-ALP-------T------------------------------------NNA-----RFDFLSSG-TTCYSRC-LD  139 (337)
Q Consensus       113 --~~a-Ll~-------~------------------------------------~~a-----~pklII~~-~S~~~~~-~d  139 (337)
                        +.+ +++       .                                    .+.     ++++|++. ++.++.. .|
T Consensus       147 ~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~~~~~~~D~e~L~~~i~~~t~~V~v~~Pn~tG~~~~d  226 (481)
T PRK04366        147 LMIRAYHEARGDTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPSNEDGLVDLEALKAAVGEDTAALMLTNPNTLGLFERN  226 (481)
T ss_pred             HHHHHHhhccCcCCCCEEEEcCCccHhHHHHHHHcCCEEEEeecCCCCCcCHHHHHhhcccCCeEEEEeCCCCccccchH
Confidence              221 111       1                                    011     25666664 4334443 58


Q ss_pred             hHHHHHHhhhcCCeEEEeccccccccc-------e---eeeeccC--------C----chhhh--hHHHHHhhc------
Q psy10669        140 YARFRQICDETDSIMFADMSHISGLIA-------G---VKGVTKT--------G----EKILY--DYEEKINNA------  189 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~~Gli~-------g---~~~T~~~--------G----g~i~~--~l~~~i~~~------  189 (337)
                      +++|.++|+++|++++||+||..|+++       |   +++++||        |    |++..  ++.+++...      
T Consensus       227 l~eI~~~a~~~gal~iVD~a~~~~~~g~~~~~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~lp~~~v~~~g  306 (481)
T PRK04366        227 ILEIAEIVHEAGGLLYYDGANLNAILGKARPGDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEELAPFLPVPVVEKDG  306 (481)
T ss_pred             HHHHHHHHHHcCCEEEEEecChhhhcccCCccccCCCEEEEechhhcCCCCCCCCCCeeeeeehhhhHhhCCCCeeeccC
Confidence            999999999999999999999866544       1   3333322        2    45433  343333100      


Q ss_pred             ---c----CC-----CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEe
Q psy10669        190 ---V----FP-----SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDL  257 (337)
Q Consensus       190 ---~----~p-----~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~  257 (337)
                         .    ++     ...++++...+.+....+..+-...+++.+++.++++++|+++|.+. +++.......|.+.+++
T Consensus       307 ~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~-~~~~~~~~~~~~~~~~~  385 (481)
T PRK04366        307 DRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDI-YDLPYDRPCMHEFVLSG  385 (481)
T ss_pred             CceeecccccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhh-CcccCCCCeeEEEEEEC
Confidence               0    01     00122222222222222333323344677788999999999999987 66653222335666664


Q ss_pred             ---cCCCcchHHHHHHHhhcCceec
Q psy10669        258 ---RKNKLTGSKVELVLEEIAIACN  279 (337)
Q Consensus       258 ---~~~~~~~~~~~~~L~~~gI~v~  279 (337)
                         ...+.+..++.++|.+.||.+.
T Consensus       386 ~~~~~~g~~~~~v~~~L~~~Gi~~~  410 (481)
T PRK04366        386 KKLKETGVRTLDIAKRLLDYGFHPP  410 (481)
T ss_pred             ccccccCCCHHHHHHHHHHCCccCC
Confidence               3335577889999999999876

>PLN02721 threonine aldolase

Probab=99.14  E-value=1.4e-08  Score=97.55  Aligned_cols=226  Identities=16%  Similarity=0.179  Sum_probs=132.5

Q ss_pred             CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCC-c-
Q psy10669         42 TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALP-T-  119 (337)
Q Consensus        42 ~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~-~-  119 (337)
                      .+|.+++++...   +  .+ .+..+|.  ...+++|    +.+++++|.+.     .+..++|+.+|+.++.++++ + 
T Consensus        18 ~~~~~~~a~~~~---~--~~-~~~~~~~--~~~~~l~----~~la~~~~~~~-----~~~~~~Gs~a~~~~l~~~~~~~g   80 (353)
T PLN02721         18 PTDAMRAAMANA---E--VD-DDVLGYD--PTALRLE----EEMAKIFGKEA-----ALFVPSGTMGNLISVLVHCDVRG   80 (353)
T ss_pred             CCHHHHHHHHhc---c--CC-CcccCCC--HHHHHHH----HHHHHHhCCce-----eEEecCccHHHHHHHHHHccCCC
Confidence            378888887532   1  11 1222332  2246676    57899999875     47778899998888887754 3 


Q ss_pred             ---------------------------------------------ccc--------cccEEEEcCc-cc--ccccC---h
Q psy10669        120 ---------------------------------------------NNA--------RFDFLSSGTT-CY--SRCLD---Y  140 (337)
Q Consensus       120 ---------------------------------------------~~a--------~pklII~~~S-~~--~~~~d---~  140 (337)
                                                                   .+.        ++++|++... +.  +...|   +
T Consensus        81 d~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l  160 (353)
T PLN02721         81 SEVILGDNSHIHLYENGGISTLGGVHPRTVKNNEDGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYT  160 (353)
T ss_pred             CeEEEcCccceehhcccchhhhcCceeEecCCCcCCCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHH
Confidence                                                         001        2567777532 22  34455   5


Q ss_pred             HHHHHHhhhcCCeEEEeccccccccc-----------e---eeeec-c-----CCchhhh--hHHHHHhhccCCCCCCCC
Q psy10669        141 ARFRQICDETDSIMFADMSHISGLIA-----------G---VKGVT-K-----TGEKILY--DYEEKINNAVFPSLQGGP  198 (337)
Q Consensus       141 ~~l~eia~~~ga~l~vD~AH~~Gli~-----------g---~~~T~-~-----~Gg~i~~--~l~~~i~~~~~p~~~g~~  198 (337)
                      ++|.++|+++|++|++|+||..|...           +   +..++ |     .|++++.  ++.+.+.... ....+++
T Consensus       161 ~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~~G~~~~~~~~~~~~~~~~~-~~~~~~~  239 (353)
T PLN02721        161 DKVGELAKRHGLKLHIDGARIFNASVALGVPVHRLVKAADSVSVCLSKGLGAPVGSVIVGSKSFIRKAKRLR-KTLGGGM  239 (353)
T ss_pred             HHHHHHHHHcCCEEEEEchhhhcchhhhCCCHHHHhhhCCEEEEecccccCCceeeEEecCHHHHHhHHHHH-HhcCCCe
Confidence            67888999999999999999765321           1   12222 3     3544443  4544433211 1111122


Q ss_pred             cHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCC-CcchHHHHHHHhhcCc
Q psy10669        199 HNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKN-KLTGSKVELVLEEIAI  276 (337)
Q Consensus       199 ~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~-~~~~~~~~~~L~~~gI  276 (337)
                      ....+.+. .++..+ + ...++.++..++.+.+.+.|.+. |+++......+.++++.+... +.+...+.+.|.+.||
T Consensus       240 ~~~~~~~~-~~~~~l-~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gi  316 (353)
T PLN02721        240 RQVGVLAA-AALVAL-Q-ENVPKLEDDHKKAKLLAEGLNQIKGLRVNVAAVETNIVYFDITDGSRITAEKLCKSLEEHGV  316 (353)
T ss_pred             ehhHHHHH-HHHHHH-H-HHHHHHHHHHHHHHHHHHHHHhCCCcEEecCCccceEEEEEccCCccccHHHHHHHHHhCCc
Confidence            22221211 122222 1 22334566678899999999986 776522234566777777542 2467888999999999


Q ss_pred             eeccCc--ccchhh
Q psy10669        277 ACNKNT--GISLAA  288 (337)
Q Consensus       277 ~v~~~~--girig~  288 (337)
                      .+.+-.  .|||..
T Consensus       317 ~v~~~~~~~lR~~~  330 (353)
T PLN02721        317 LLMPGNSSRIRVVT  330 (353)
T ss_pred             EEecCCCceEEEEe
Confidence            998654  778864

>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]

Probab=99.13  E-value=2e-09  Score=108.37  Aligned_cols=200  Identities=17%  Similarity=0.166  Sum_probs=142.4

Q ss_pred             HHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHhhCCc------------------------------------
Q psy10669         77 IEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEKALPT------------------------------------  119 (337)
Q Consensus        77 lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~aLl~~------------------------------------  119 (337)
                      .-..+++.+++.||++++     .....| |.||.+++.|++++                                    
T Consensus        71 ~i~eAqe~aA~~fgAd~t-----yFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p~~np~~  145 (557)
T COG1982          71 PIKEAQELAARVFGADHT-----YFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGLILAGATPVYLEPSRNPLY  145 (557)
T ss_pred             cHHHHHHHHHHHhCCCce-----EEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHHHHHcCCceEEecCCCCccc
Confidence            344566889999999984     333456 57899999999875                                    


Q ss_pred             -----------c---ccc--c-cE-EEEcCcccccccChHHHHHHhhhcCCeEEEeccccc-----cccc----------
Q psy10669        120 -----------N---NAR--F-DF-LSSGTTCYSRCLDYARFRQICDETDSIMFADMSHIS-----GLIA----------  166 (337)
Q Consensus       120 -----------~---~a~--p-kl-II~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~-----Gli~----------  166 (337)
                                 +   ++.  - |+ ||..++.|+...|.+++.+.++++++++.+|.+|.+     ++..          
T Consensus       146 gi~ggI~~~~~~~~l~~~~~~~k~~vitnpTYdGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~~~~~~~  225 (557)
T COG1982         146 GIIGGIPLETFKEALLAHPDAEKLAVITNPTYDGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESALNGGADF  225 (557)
T ss_pred             cccCCCCHHHHHHHHHhChhhheeEEEecCccceEeecHHHHHHHHhhcCceEEhhhcCcccccccccCcchhhhcCceE
Confidence                       0   011  2 54 444588889999999999999999999999999986     2222          


Q ss_pred             eeeeeccC-Cchhhh------h----HHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHH----HHH
Q psy10669        167 GVKGVTKT-GEKILY------D----YEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKAN----ASH  231 (337)
Q Consensus       167 g~~~T~~~-Gg~i~~------~----l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~n----a~~  231 (337)
                      .+.||||. ||+-.+      +    ..++++.+..-...++|..+.+|++.+|.... ...+++..+.+++.    .++
T Consensus       226 ~tqS~HK~l~alSQaS~iHv~~~~~~~~~r~nea~~~h~STSPsY~l~ASlD~Ar~~~-~~~G~~l~~~~~~~~i~~r~~  304 (557)
T COG1982         226 VTQSTHKLLAALSQASMIHVKDGRAVNHERFNEALMMHQSTSPSYPLMASLDVARMQE-GNAGRELWQEVIDEAIDFRKA  304 (557)
T ss_pred             EEechhhhhhhhhhhHHHhhCCCccCCHHHHHHHHHHHccCCchHHHHHHHHHHHHhh-hhhhHHHHHHHHHHHHHHHHH
Confidence            24678774 454432      1    14577777655567899999999999965554 45667774444444    444


Q ss_pred             HHHHHHh-CCCEEecCC--------------------CCCeEEEEEecCCCcchHHHHHHHhhcCceeccCc
Q psy10669        232 LSDEMIK-RGYHVVTGG--------------------TDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT  282 (337)
Q Consensus       232 l~~~L~~-~G~~v~~~~--------------------t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~  282 (337)
                      +++...+ .+|.+...+                    .|.--+.|.+...|+.+..+++.|.+.||...+..
T Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~tp~~Gipg~~v~~~L~e~gii~e~~~  376 (557)
T COG1982         305 LRRLINEIGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTITTPEFGIPGAIVAKYLREHGIIPEETG  376 (557)
T ss_pred             HHHHHHhcCCeeeccccccCCcccccccccccccceeccccEEEEecCCCCCcHHHHHHHHHHcCCeeeecC
Confidence            4444444 357766532                    25666777777999999999999999999988766

>PRK03080 phosphoserine aminotransferase; Provisional

Probab=99.12  E-value=4.9e-09  Score=102.75  Aligned_cols=241  Identities=14%  Similarity=0.036  Sum_probs=148.0

Q ss_pred             ceeeeccCCCCCHH-HHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecC--CCchh
Q psy10669         32 GIELIASENFTSLA-VLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPY--SGSPA  108 (337)
Q Consensus        32 ~i~l~asen~~~p~-V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~--Sgt~A  108 (337)
                      .+++.+.=.-++|. |++++...+.     +..    +.+. ...++-..+++.++++||++.+ +  .|.|+  |||.+
T Consensus        13 ~~~f~~Gp~~~~~~~v~~a~~~~~~-----~~~----hr~~-~f~~~~~~~r~~l~~l~~~~~~-~--~v~~~~gs~T~~   79 (378)
T PRK03080         13 DPRFSSGPCKKRPGWQLEALADALL-----GRS----HRQK-PVKALLKRVIEGTRELLSLPEG-Y--EVGIVPGSDTGA   79 (378)
T ss_pred             CCCcCCCCcCCChHHHHHHHHhhhc-----ccC----cCCH-HHHHHHHHHHHHHHHHhCCCCC-c--eEEEECCchHHH
Confidence            34556655566788 9999974321     111    2222 3355667789999999998532 1  45543  67888


Q ss_pred             HHHHHHhhCCc----------------c-c-----c-------------------c-ccEEEEcCc--ccccccChHHHH
Q psy10669        109 NFAVCEKALPT----------------N-N-----A-------------------R-FDFLSSGTT--CYSRCLDYARFR  144 (337)
Q Consensus       109 N~~v~~aLl~~----------------~-~-----a-------------------~-pklII~~~S--~~~~~~d~~~l~  144 (337)
                      +.+++.+|+++                . .     .                   + +|+|.+++.  +.+...|+++|.
T Consensus        80 ~~~~~~~l~~~~~~~vi~~g~f~~~~~~~~~~~~g~~~v~~~~~~~g~~~d~~~i~~~~~V~~~h~~t~tG~~~pi~~I~  159 (378)
T PRK03080         80 WEMALWSLLGARRVDHLAWESFGSKWATDVVKQLKLEDPRVLEADYGSLPDLSAVDFDRDVVFTWNGTTTGVRVPVARWI  159 (378)
T ss_pred             HHHHHHhcCCCCcceEEEeCHHHHHHHHHHHhhcCCCCceEeccCCCCCCCHhhcCCCCCEEEEecCCccceeccchhhc
Confidence            77777888752                0 0     0                   0 233666543  347888988887


Q ss_pred             HHhhhcCCeEEEeccccccccc-------eeee-ecc-----CC-chhh-h-hHHHHHhhcc------------------
Q psy10669        145 QICDETDSIMFADMSHISGLIA-------GVKG-VTK-----TG-EKIL-Y-DYEEKINNAV------------------  190 (337)
Q Consensus       145 eia~~~ga~l~vD~AH~~Gli~-------g~~~-T~~-----~G-g~i~-~-~l~~~i~~~~------------------  190 (337)
                      +  +++|++++||++|++|.+.       .+.+ .+|     .| |++. . ++.+++++..                  
T Consensus       160 ~--~~~g~~~vVDa~qs~G~~pidv~~iD~~~~s~~K~l~~P~G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  237 (378)
T PRK03080        160 G--ADREGLTICDATSAAFALPLDWSKLDVYTFSWQKVLGGEGGHGMAILSPRAVERLESYTPARPIPKFFRLTKGGKAI  237 (378)
T ss_pred             c--ccCCCeEEEecccccccCCCCHHHCcEEEEehhhhCCCCCceEEEEECHHHHHhhhcccCCCCCchhheeccchHHh
Confidence            7  7789999999999999998       2333 332     34 4443 2 3433333210                  


Q ss_pred             ---C-CCCCCCCcHHHHHHHHHHHHHHhch-hhHHHHHHHHHHHHHHHHHHHhCC-CEEecC-CC--CCeEEEEEecCC-
Q psy10669        191 ---F-PSLQGGPHNHAIGAIATAMLQAQSD-EFKSYQAQVKANASHLSDEMIKRG-YHVVTG-GT--DVHLILIDLRKN-  260 (337)
Q Consensus       191 ---~-p~~~g~~~~~~iaala~a~~e~~~~-~~~~y~~~v~~na~~l~~~L~~~G-~~v~~~-~t--~~h~v~V~~~~~-  260 (337)
                         | .+..+||+.+.+.++..+++++.+. ..+...++..++++++.+.|.+.| +.++.. ..  .+.++.+.+... 
T Consensus       238 ~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~i~~~~~~~~~  317 (378)
T PRK03080        238 ENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAEKTPWATPLVADPATRSNTSVTLDFVDAQ  317 (378)
T ss_pred             hhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccCccEEEEEcCCch
Confidence               1 1223567777788889999999765 457888999999999999999876 566531 11  123454444320 


Q ss_pred             -CcchHHHHHHHhhcCceecc------Ccccchhh
Q psy10669        261 -KLTGSKVELVLEEIAIACNK------NTGISLAA  288 (337)
Q Consensus       261 -~~~~~~~~~~L~~~gI~v~~------~~girig~  288 (337)
                       +.+...+.+ |.+.||.+..      ...+||+.
T Consensus       318 ~~~~~~~~~~-l~~~~i~v~~g~~~~~~~~vRis~  351 (378)
T PRK03080        318 AAVDAAAVAK-LLRENGAVDIEPYRDAPNGLRIWC  351 (378)
T ss_pred             HHHHHHHHHH-HHHcCCeeccccccCCCCcEEEec
Confidence             234444444 4444777642      12678773

>TIGR01885 Orn_aminotrans ornithine aminotransferase

Probab=99.12  E-value=6.7e-09  Score=102.34  Aligned_cols=227  Identities=19%  Similarity=0.166  Sum_probs=140.8

Q ss_pred             CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhh------
Q psy10669         43 SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKA------  116 (337)
Q Consensus        43 ~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aL------  116 (337)
                      +|+|.+|+...+. +++.+   ++.+ .+....++|    +++++++|.+.     .+.++||+.||.+++..+      
T Consensus        55 ~p~v~~a~~~~~~-~~~~~---~~~~-~~~~~~~l~----~~l~~~~~~~~-----~~~~~SGs~A~e~ai~~a~~~~~~  120 (401)
T TIGR01885        55 HPKIVKALTEQAQ-KLTLS---SRAF-YNDVFGEFA----EYVTKLFGYDK-----VLPMNTGAEAVETAIKLARKWGYK  120 (401)
T ss_pred             CHHHHHHHHHHHH-hcccc---cccc-CCHHHHHHH----HHHHhhcCCCE-----EEEeCccHHHHHHHHHHHHHHhhh
Confidence            8999999987644 44322   2222 234445565    47788898653     577899999999888863      


Q ss_pred             ----CC-c------------------------------------------------c--ccc--c--cEEEEcCccccc-
Q psy10669        117 ----LP-T------------------------------------------------N--NAR--F--DFLSSGTTCYSR-  136 (337)
Q Consensus       117 ----l~-~------------------------------------------------~--~a~--p--klII~~~S~~~~-  136 (337)
                          .+ +                                                +  +.+  +  ..||+. +.+++ 
T Consensus       121 ~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~avi~E-~v~~~~  199 (401)
T TIGR01885       121 VKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPYNNLEALEEALEDHGPNVCAFIVE-PIQGEA  199 (401)
T ss_pred             hcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCCCCHHHHHHHHHhcCCCEEEEEEe-CccCCC
Confidence                11 1                                                0  000  1  245443 34332 


Q ss_pred             --ccC----hHHHHHHhhhcCCeEEEeccccccccc-e-------------eeeecc--CCch-----hhh--hHHHHHh
Q psy10669        137 --CLD----YARFRQICDETDSIMFADMSHISGLIA-G-------------VKGVTK--TGEK-----ILY--DYEEKIN  187 (337)
Q Consensus       137 --~~d----~~~l~eia~~~ga~l~vD~AH~~Gli~-g-------------~~~T~~--~Gg~-----i~~--~l~~~i~  187 (337)
                        ..+    +++|+++|+++|+++++|++| .|+-- |             +...+|  .||+     +++  ++.+.+.
T Consensus       200 G~~~~~~~~l~~l~~l~~~~~~lli~DEv~-~g~g~~G~~~~~~~~~~~~di~~~gK~l~~g~~~ig~v~~~~~i~~~~~  278 (401)
T TIGR01885       200 GVVVPDDGYLKKVRELCTKHNVLLIADEIQ-TGLGRTGKLLCVDHENVKPDIVLLGKALSGGVYPVSAVLADDDVMLTIK  278 (401)
T ss_pred             CCccCCHHHHHHHHHHHHHcCCEEEEechh-hCCCccchhhHHhhcCCCCCEEEeeccccCCCCCcEEEEEcHHHHhhcc
Confidence              232    788999999999999999999 56421 1             111123  1332     233  5666555


Q ss_pred             hccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEec-CCCCCeEEEEEecCCC--cch
Q psy10669        188 NAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVT-GGTDVHLILIDLRKNK--LTG  264 (337)
Q Consensus       188 ~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~-~~t~~h~v~V~~~~~~--~~~  264 (337)
                      ....+.+++ .+++..++...++..+.+ +  ...+++.+++++|.+.|.+.+..++. -.....+..|.+....  .+.
T Consensus       279 ~~~~~~t~~-~~p~~~~aa~a~L~~i~~-~--~l~~~~~~~~~~~~~~L~~l~~~~~~~~~g~g~~~~i~~~~~~~~~~~  354 (401)
T TIGR01885       279 PGEHGSTYG-GNPLACAVAVAALEVLEE-E--KLAENAEKLGEIFRDQLKKLPKPIITEVRGRGLLNAIVIDESKTGRTA  354 (401)
T ss_pred             CCCCCCCCC-CCHHHHHHHHHHHHHHHh-c--cHHHHHHHHHHHHHHHHHhccCCceeEEeecCeeEEEEeccCcchhHH
Confidence            433444454 456666666666665532 2  46678888999999999997655542 1124556666665432  356


Q ss_pred             HHHHHHHhhcCceeccCc--ccchhhh
Q psy10669        265 SKVELVLEEIAIACNKNT--GISLAAE  289 (337)
Q Consensus       265 ~~~~~~L~~~gI~v~~~~--girig~~  289 (337)
                      .++.+.|.+.||.+.+..  .+||+.+
T Consensus       355 ~~l~~~l~~~Gv~v~~~~~~~lRi~p~  381 (401)
T TIGR01885       355 WDLCLKLKEKGLLAKPTHGNIIRLAPP  381 (401)
T ss_pred             HHHHHHHHhCCEEEEecCCCEEEEeCC
Confidence            778888888899987643  6888875

This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.

>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits

Probab=99.12  E-value=4.6e-09  Score=102.77  Aligned_cols=166  Identities=10%  Similarity=0.048  Sum_probs=100.0

Q ss_pred             ccEEEEcC-cccccccCh-HHHHHHhhhcCCeEEEeccccccccc---------eeeee-cc----------CCchhhh-
Q psy10669        124 FDFLSSGT-TCYSRCLDY-ARFRQICDETDSIMFADMSHISGLIA---------GVKGV-TK----------TGEKILY-  180 (337)
Q Consensus       124 pklII~~~-S~~~~~~d~-~~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T-~~----------~Gg~i~~-  180 (337)
                      +++|++.. +..+...|+ ++|.++|+++|+++++|++|..|...         .++++ +|          .+|++.. 
T Consensus       160 t~~viv~~~~~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~~~~~~~~~~~d~~~~s~~K~~~p~g~Ggp~~g~l~~~  239 (398)
T cd00613         160 VAALMVQYPNTLGVFEDLIKEIADIAHSAGALVYVDGDNLNLTGLKPPGEYGADIVVGNLQKTGVPHGGGGPGAGFFAVK  239 (398)
T ss_pred             eEEEEEECCCCCceecchHHHHHHHHHhcCCEEEEEeccccccCCCChHHcCCCEEEeeccccCCCCCCCCCceeEEEEh
Confidence            57677663 334566776 99999999999999999999876533         12222 22          2345543 


Q ss_pred             -hHHHHHhhc-----------------------------cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHH
Q psy10669        181 -DYEEKINNA-----------------------------VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANAS  230 (337)
Q Consensus       181 -~l~~~i~~~-----------------------------~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~  230 (337)
                       ++.+.+...                             ..+.+++ ..+...++.+++++.+....+++.+++..++++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~-~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~~  318 (398)
T cd00613         240 KELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICT-GQALLALMAAMYIVYLGPEGLKEIAERAHLNAN  318 (398)
T ss_pred             hhhHhhCCCCeeccccccCCCcceEEecccchhhccccccccccee-cHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence             344433110                             0011121 122333334444455444456788999999999


Q ss_pred             HHHHHHHhCCCEEecCCCCCeEEEEEecCC-CcchHHHHHHHhhcCceeccC-----cccchhhhh
Q psy10669        231 HLSDEMIKRGYHVVTGGTDVHLILIDLRKN-KLTGSKVELVLEEIAIACNKN-----TGISLAAEI  290 (337)
Q Consensus       231 ~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~-~~~~~~~~~~L~~~gI~v~~~-----~girig~~~  290 (337)
                      +|.++|.+.|......+...+++.+.+... +.+..++.+.|.+.||.+...     ..|||....
T Consensus       319 ~l~~~L~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~L~~~gi~~~~~~~~~~~~lRis~~~  384 (398)
T cd00613         319 YLAKRLKEVGGVLPFNGPFFHEFVLRLPPLYGIRAEDLAKALIDGGFHAPTMYLPVDGTLMIEPTE  384 (398)
T ss_pred             HHHHHHHhcCCcccCCCCeeEEEEEEcCCcchHHHHHHHHhhhhcCccccccccCCCCeEEEEcCC
Confidence            999999997655422223345566666542 345677888888889988652     167775433

This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.

>PRK05968 hypothetical protein; Provisional

Probab=99.11  E-value=1.5e-09  Score=106.93  Aligned_cols=225  Identities=13%  Similarity=0.050  Sum_probs=132.4

Q ss_pred             eeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHH
Q psy10669         33 IELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV  112 (337)
Q Consensus        33 i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v  112 (337)
                      -.+..|-.|..+.+ +.+...+..+ ..++.-+|+  ++....++|    +++++++|.++     ++.++||+.|+..+
T Consensus        28 ~pi~~~~~~~~~~~-~~~~~~~~~~-~~~~~Y~r~--~~p~~~~le----~~lA~l~g~~~-----av~~~sG~~Ai~~a   94 (389)
T PRK05968         28 PPIFQTSLFTFDSY-DEMEDVYAGE-KVRPIYSRG--DNPTVRAFE----EMLAKLEGAED-----ARGFASGMAAISST   94 (389)
T ss_pred             CCccCCcceecCCH-HHHHHhhcCC-CCCccccCC--CChhHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHH
Confidence            34566667765554 2332222211 111112222  335567888    57899999986     68889999999888


Q ss_pred             HHhhCCc----------------------------------------c--cccccEEEEc-Ccc-cccccChHHHHHHhh
Q psy10669        113 CEKALPT----------------------------------------N--NARFDFLSSG-TTC-YSRCLDYARFRQICD  148 (337)
Q Consensus       113 ~~aLl~~----------------------------------------~--~a~pklII~~-~S~-~~~~~d~~~l~eia~  148 (337)
                      +.+++++                                        +  ..++|+|++. +++ .....|+++|.++|+
T Consensus        95 l~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~~i~~tklV~ie~pt~~~~~~~dl~~i~~la~  174 (389)
T PRK05968         95 VLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDGRDEEAVAKALPGAKLLYLESPTSWVFELQDVAALAALAK  174 (389)
T ss_pred             HHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCCCCHHHHHHhcccCCEEEEECCCCCCCcHHHHHHHHHHHH
Confidence            8888664                                        1  1126888775 222 234578888889999


Q ss_pred             hcCCeEEEeccccccccc-----e---e-eeecc--------CCchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHH
Q psy10669        149 ETDSIMFADMSHISGLIA-----G---V-KGVTK--------TGEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATA  209 (337)
Q Consensus       149 ~~ga~l~vD~AH~~Gli~-----g---~-~~T~~--------~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a  209 (337)
                      ++|+++++|++|..++..     |   + .|.+|        .||+++.  ++.+++....+|.+.+..+ +..|++.  
T Consensus       175 ~~gi~vivD~a~a~~~~~~p~~~g~Divv~S~tK~l~g~~~~~gG~i~~~~~~~~~l~~~~~~~~g~~~~-~~~A~~~--  251 (389)
T PRK05968        175 RHGVVTMIDNSWASPVFQRPITLGVDLVIHSASKYLGGHSDTVAGVVAGSKEHIARINAEAYPYLGAKLS-PFEAWLL--  251 (389)
T ss_pred             HcCCEEEEECCCcchhccCchhcCCcEEEeeccccccCCCCeEEEEEEECHHHHHHHHHHHHHhCCCCCC-hHHHHHH--
Confidence            999999999999888643     1   2 22222        2566654  4556555433343333333 3444432  


Q ss_pred             HHHHhchhhHHHHHHHHHHHHHHHHHHHh-CCCEEec-CCCCCe----------EEEEEecCCCcchHHHHHHHhhcCc
Q psy10669        210 MLQAQSDEFKSYQAQVKANASHLSDEMIK-RGYHVVT-GGTDVH----------LILIDLRKNKLTGSKVELVLEEIAI  276 (337)
Q Consensus       210 ~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~G~~v~~-~~t~~h----------~v~V~~~~~~~~~~~~~~~L~~~gI  276 (337)
                      +..+  .....+.++-.+|++++++.|.+ .++..+. .+..+|          ++.+.+.. +.+...+.+.|...+|
T Consensus       252 l~~L--~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~-~~~~~~f~~~L~~~~~  327 (389)
T PRK05968        252 LRGL--RTLPLRMKAHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFRE-GIDVRAFADALKLFRL  327 (389)
T ss_pred             Hccc--CcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECC-HHHHHHHHHhCCccEE
Confidence            3333  23467888888999999999988 4665443 333443          66666642 3233344444443333

>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis

Probab=99.10  E-value=1.7e-09  Score=105.51  Aligned_cols=191  Identities=12%  Similarity=0.071  Sum_probs=126.1

Q ss_pred             ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669         70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------  119 (337)
Q Consensus        70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------  119 (337)
                      ++...+++|    +++++++|.+.     .+.++||+.||..++.+++++                              
T Consensus        38 ~~p~~~~le----~~la~l~g~~~-----a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~  108 (369)
T cd00614          38 GNPTVDALE----KKLAALEGGEA-----ALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFERLLPKLGIEVT  108 (369)
T ss_pred             CChhHHHHH----HHHHHHHCCCC-----EEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHHHHHhhcCeEEE
Confidence            556678888    58889999875     688899999999999998754                              


Q ss_pred             -----------ccc--cccEEEEcCcc--cccccChHHHHHHhhhcCCeEEEeccccccccc--------eeeee-cc--
Q psy10669        120 -----------NNA--RFDFLSSGTTC--YSRCLDYARFRQICDETDSIMFADMSHISGLIA--------GVKGV-TK--  173 (337)
Q Consensus       120 -----------~~a--~pklII~~~S~--~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~--------g~~~T-~~--  173 (337)
                                 +..  ++|+|++....  .+...|+++|.++|+++|++++||++|..|+..        .++++ +|  
T Consensus       109 ~v~~~d~~~l~~~i~~~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD~t~~~~~~~~~~~~g~Divv~S~tK~l  188 (369)
T cd00614         109 FVDPDDPEALEAAIKPETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNTFATPYLQRPLELGADIVVHSATKYI  188 (369)
T ss_pred             EeCCCCHHHHHHhcCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcchhcCChhhhCCcEEEeccceec
Confidence                       001  26888876222  246778999999999999999999999998763        12222 22  


Q ss_pred             ------CCchhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC-CE-
Q psy10669        174 ------TGEKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG-YH-  242 (337)
Q Consensus       174 ------~Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G-~~-  242 (337)
                            .||++++   ++.+++..... . .|+...+..++++  +..+  .....++++..+|++++++.|.+.+ +. 
T Consensus       189 ~g~~~~~gG~v~~~~~~l~~~l~~~~~-~-~g~~~~p~~a~~~--l~~l--~tl~~r~~~~~~na~~la~~L~~~~~v~~  262 (369)
T cd00614         189 GGHSDVIAGVVVGSGEALIQRLRFLRL-A-LGTILSPFDAWLL--LRGL--KTLPLRMERHSENALKVAEFLEKHPKVER  262 (369)
T ss_pred             cCCCCceEEEEEeCcHHHHHHHHHHHH-h-hCCCCCHHHHHHH--HcCC--CCHHHHHHHHHHHHHHHHHHHHcCCCccE
Confidence                  2566765   35555554321 1 2333334333332  2222  2456789999999999999999864 32 


Q ss_pred             EecC---------------CCCCeEEEEEecCCCcchHHHHHHHhhcCcee
Q psy10669        243 VVTG---------------GTDVHLILIDLRKNKLTGSKVELVLEEIAIAC  278 (337)
Q Consensus       243 v~~~---------------~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v  278 (337)
                      |...               ...+.++.+.+..   +...+.+.++...+..
T Consensus       263 V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~---~~~~~~~f~~~l~~~~  310 (369)
T cd00614         263 VYYPGLPSHPQHELAKKQMSGYGGVFSFELKG---GLEAAKKFLNALKLFS  310 (369)
T ss_pred             EECCCCCCCchHHHHHHhcCCCceEEEEEeCC---CHHHHHHHHHcCCcce
Confidence            2221               1346788887753   3455667777655543

This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.

>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions

Probab=99.08  E-value=5.1e-09  Score=101.96  Aligned_cols=197  Identities=14%  Similarity=0.129  Sum_probs=126.2

Q ss_pred             cchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhC-Cc------------------------------
Q psy10669         71 NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL-PT------------------------------  119 (337)
Q Consensus        71 ~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl-~~------------------------------  119 (337)
                      ...++++|    ++++++||.++     .+.++|||.|...++.++- ++                              
T Consensus        24 g~~~~~fE----~~~a~~~g~~~-----~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~~~~~~ai~~~G~~pv~~Di   94 (363)
T PF01041_consen   24 GPYVEEFE----KEFAEYFGVKY-----AVAVSSGTSALHLALRALGLGPGDEVIVPAYTFPATASAILWAGAEPVFVDI   94 (363)
T ss_dssp             SHHHHHHH----HHHHHHHTSSE-----EEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-THHHHHHHHTT-EEEEE-B
T ss_pred             CHHHHHHH----HHHHHHhCCCe-----EEEeCChhHHHHHHHHhcCCCcCceEecCCCcchHHHHHHHHhccEEEEEec
Confidence            46778898    58899999886     7999999999999989972 21                              


Q ss_pred             ------------ccc---cccEEEEcCcccccccChHHHHHHhhhcCCeEEEeccccccccc-----------eeeeec-
Q psy10669        120 ------------NNA---RFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA-----------GVKGVT-  172 (337)
Q Consensus       120 ------------~~a---~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----------g~~~T~-  172 (337)
                                  +.+   ++|.|++.+ .|+...|+.+|.++|+++|++||-|+||+.|---           ++.|.+ 
T Consensus        95 ~~~~~~id~~~~~~~i~~~t~ai~~~h-~~G~~~d~~~i~~~~~~~~i~lIeD~a~a~g~~~~g~~~G~~gd~~~fSf~~  173 (363)
T PF01041_consen   95 DPETLNIDPEALEKAITPKTKAILVVH-LFGNPADMDAIRAIARKHGIPLIEDAAQAFGARYKGRPVGSFGDIAIFSFHP  173 (363)
T ss_dssp             ETTTSSB-HHHHHHHHHTTEEEEEEE--GGGB---HHHHHHHHHHTT-EEEEE-TTTTT-EETTEETTSSSSEEEEESST
T ss_pred             cCCcCCcCHHHHHHHhccCccEEEEec-CCCCcccHHHHHHHHHHcCCcEEEccccccCceeCCEeccCCCCceEecCCC
Confidence                        111   268888875 8899999999999999999999999999997532           223332 


Q ss_pred             -c-----CCchhhh---hHHHHHhhccCCCC--------------CCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHH
Q psy10669        173 -K-----TGEKILY---DYEEKINNAVFPSL--------------QGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANA  229 (337)
Q Consensus       173 -~-----~Gg~i~~---~l~~~i~~~~~p~~--------------~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na  229 (337)
                       |     .||+|++   ++.+++......+.              ..+..++.+ ..++++.++  ...++..++=.+|+
T Consensus       174 ~K~i~~geGG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~n~rm~~~-~AAigl~QL--~~L~~~~~~R~~~a  250 (363)
T PF01041_consen  174 TKIITTGEGGAVVTNDPELAERARALRNHGRSRDAFRRYRHELPPGYNFRMSEL-QAAIGLAQL--KRLDEIIARRRENA  250 (363)
T ss_dssp             TSSS-SSS-EEEEESTHHHHHHHHHHTBTTEETSECSTTEESSSS--B-B-BHH-HHHHHHHHH--HTHHHHHHHHHHHH
T ss_pred             CCCCcCCCCeeEEecHHHHHHHhhhhhccCcCccccccccccccCCcccccHHH-HHHHHHHHH--HHhhhhHHHHHHHH
Confidence             2     3888876   35554432111110              011122222 223334444  34667788888999


Q ss_pred             HHHHHHHHhC-CCEEec--CC---CCCeEEEEEecCCC-cchHHHHHHHhhcCceecc
Q psy10669        230 SHLSDEMIKR-GYHVVT--GG---TDVHLILIDLRKNK-LTGSKVELVLEEIAIACNK  280 (337)
Q Consensus       230 ~~l~~~L~~~-G~~v~~--~~---t~~h~v~V~~~~~~-~~~~~~~~~L~~~gI~v~~  280 (337)
                      +.+.+.|.+. |+....  .+   ..-|..+|.+.+.. .+-..+.+.|.+.||.+..
T Consensus       251 ~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~rd~l~~~L~~~GI~~~~  308 (363)
T PF01041_consen  251 QRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPDEALADRDELVEALRARGIETRP  308 (363)
T ss_dssp             HHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETCCGCSTHHHHHHHHHHTTBEEBC
T ss_pred             HHHHHHHhcCCCcccccccccccccccccccccccccccchHHHHHHHHHHCCCcccc
Confidence            9999999984 554544  11   23456677776542 2567788999999999886

The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....

>PRK06767 methionine gamma-lyase; Provisional

Probab=99.08  E-value=2.7e-09  Score=104.92  Aligned_cols=161  Identities=14%  Similarity=0.069  Sum_probs=106.5

Q ss_pred             ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669         70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------  119 (337)
Q Consensus        70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------  119 (337)
                      ++...+++|    +++++++|.++     ++.+.||+.|+.+++.+++++                              
T Consensus        59 ~~pt~~~Le----~~lA~l~G~~~-----al~~~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~  129 (386)
T PRK06767         59 GNPTVKLFE----ERMAVLEGGEE-----ALAFGSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFMITHS  129 (386)
T ss_pred             CCcchHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcCeEEE
Confidence            566678888    58899999875     688999999998888888754                              


Q ss_pred             ----------ccc---cccEEEEcC-cc-cccccChHHHHHHhhhcCCeEEEeccccccccc-----e---eeee-cc--
Q psy10669        120 ----------NNA---RFDFLSSGT-TC-YSRCLDYARFRQICDETDSIMFADMSHISGLIA-----G---VKGV-TK--  173 (337)
Q Consensus       120 ----------~~a---~pklII~~~-S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----g---~~~T-~~--  173 (337)
                                +.+   ++|+|++.. ++ .+...|+++|.++|+++|+++++|+||..+...     |   ++++ +|  
T Consensus       130 ~~~~~d~~~l~~~i~~~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD~a~a~~~~~~pl~~g~Div~~S~sK~l  209 (386)
T PRK06767        130 FCDMETEADIENKIRPNTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFCSPYLQRPLELGCDAVVHSATKYI  209 (386)
T ss_pred             EeCCCCHHHHHHhhCcCceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEECCCcccccCCchhcCCcEEEecCccee
Confidence                      101   268887753 33 347789999999999999999999999877654     1   2222 22  


Q ss_pred             ------CCchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-CCCEEe
Q psy10669        174 ------TGEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-RGYHVV  244 (337)
Q Consensus       174 ------~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~G~~v~  244 (337)
                            .||++++  ++.+++....+..+ |+...+..|+++  +..+  .....+.++..+|++++++.|.+ .+++.+
T Consensus       210 ~g~g~~~gG~v~~~~~~i~~~~~~~~~~~-g~~~~~~~a~l~--~~~L--~tl~~r~~~~~~~a~~la~~L~~~p~v~~v  284 (386)
T PRK06767        210 GGHGDVVAGVTICKTRALAEKIRPMRKDI-GGIMAPFDAWLL--LRGL--KTLAVRMDRHCDNAEKIVSFLKNHDAVEGV  284 (386)
T ss_pred             cCCCCceeEEEEeChHHHHHHHHHHHHHh-CCCCCHHHHHHH--HcCC--CcHHHHHHHHHHHHHHHHHHHHcCCCccEE
Confidence                  1577765  33333221112222 222233334332  2222  23457788999999999999998 477743

>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]

Probab=99.07  E-value=1.3e-08  Score=99.03  Aligned_cols=213  Identities=15%  Similarity=0.147  Sum_probs=142.3

Q ss_pred             CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhC-Cc-
Q psy10669         42 TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL-PT-  119 (337)
Q Consensus        42 ~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl-~~-  119 (337)
                      +...-++++..++.+.+         ++.-..+.++|    +.+++++|+++     .+.+.|||.|+...+.+|. ++ 
T Consensus        13 i~~~e~~~v~~vl~sg~---------i~~G~~v~~FE----~~~ae~~G~k~-----ava~~sgT~AL~laL~al~ig~G   74 (374)
T COG0399          13 IGEEELAAVQEVLKSGW---------LTGGPFVRRFE----QAFAEYLGVKY-----AVAVSSGTAALHLALLALAIGPG   74 (374)
T ss_pred             cchHHHHHHHHHHHcCC---------eecChHHHHHH----HHHHHHhCCCe-----EEEecChHHHHHHHHHhcCCCCC
Confidence            45566677766655432         33345678899    48899999997     6888999999988888552 21 


Q ss_pred             -----------------------------------------ccc---cccEEEEcCcccccccChHHHHHHhhhcCCeEE
Q psy10669        120 -----------------------------------------NNA---RFDFLSSGTTCYSRCLDYARFRQICDETDSIMF  155 (337)
Q Consensus       120 -----------------------------------------~~a---~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~  155 (337)
                                                               +.+   ++|.||.-+ .|+...|.+.|.+||++||.++|
T Consensus        75 DeVI~ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~tKAIipVh-l~G~~~dm~~i~~la~~~~l~vI  153 (374)
T COG0399          75 DEVIVPSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPRTKAIIPVH-LAGQPCDMDAIMALAKRHGLPVI  153 (374)
T ss_pred             CEEEecCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccCCeEEEEeh-hccCCCCHHHHHHHHHHcCCeEE
Confidence                                                     111   279888865 89999999999999999999999


Q ss_pred             Eeccccccccc--------e--eeeec---c-----CCchhhh---hHHHHHhhccCCCCCC-------------CCc-H
Q psy10669        156 ADMSHISGLIA--------G--VKGVT---K-----TGEKILY---DYEEKINNAVFPSLQG-------------GPH-N  200 (337)
Q Consensus       156 vD~AH~~Gli~--------g--~~~T~---~-----~Gg~i~~---~l~~~i~~~~~p~~~g-------------~~~-~  200 (337)
                      -|+||+.|-.=        |  .++.+   |     .||.+++   ++.+++....+.|+..             +.. .
T Consensus       154 EDaAqa~Ga~y~gk~vGt~Gd~~~fSF~~~K~ittgEGGav~tnd~ela~k~~~lr~hG~~~~~~~~y~~~~~G~N~rm~  233 (374)
T COG0399         154 EDAAQAHGATYKGKKVGSFGDIGAFSFHATKNLTTGEGGAVVTNDEELAEKARSLRNHGLSRDAVFKYLHEELGYNYRLT  233 (374)
T ss_pred             EEcchhccCeecCcccccccceEEEEecCCCCccccCceEEEeCCHHHHHHHHHHHHhCcCCCccccceeeecccccCHH
Confidence            99999987654        1  11221   1     4899987   3666554332222211             122 2


Q ss_pred             HHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEec--CC--CCCeEEEEEecCCCcchHHHHHHHhhcC
Q psy10669        201 HAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVT--GG--TDVHLILIDLRKNKLTGSKVELVLEEIA  275 (337)
Q Consensus       201 ~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~--~~--t~~h~v~V~~~~~~~~~~~~~~~L~~~g  275 (337)
                      ...||+..+  ++  ...++..++=.++++...+.|.+. ++.+..  .+  ..-|+.++-+...+.+-..+...|.+.|
T Consensus       234 ~iqAAigl~--QL--~~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~~~~~~~R~~l~~~L~~~g  309 (374)
T COG0399         234 EIQAAIGLA--QL--ERLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILVDEEGISRDALMESLKEAG  309 (374)
T ss_pred             HHHHHHHHH--HH--HHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeEEEecCCCCCHHHHHHHHHhCC
Confidence            333443333  33  234455666667888888888874 454443  11  3467888888776667788899999887


Q ss_pred             ce
Q psy10669        276 IA  277 (337)
Q Consensus       276 I~  277 (337)
                      |.
T Consensus       310 i~  311 (374)
T COG0399         310 VG  311 (374)
T ss_pred             CC
Confidence            76

>cd00609 AAT_like Aspartate aminotransferase family

Probab=99.07  E-value=1.9e-08  Score=95.58  Aligned_cols=162  Identities=14%  Similarity=0.200  Sum_probs=110.3

Q ss_pred             ccEEEEcCcc--cccccChHHHH---HHhhhcCCeEEEeccccccccce----------------eeee-cc-------C
Q psy10669        124 FDFLSSGTTC--YSRCLDYARFR---QICDETDSIMFADMSHISGLIAG----------------VKGV-TK-------T  174 (337)
Q Consensus       124 pklII~~~S~--~~~~~d~~~l~---eia~~~ga~l~vD~AH~~Gli~g----------------~~~T-~~-------~  174 (337)
                      +++|++.+..  .+...|.+++.   ++|+++|+++++|+||+.+...+                +.++ +|       +
T Consensus       133 ~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~  212 (350)
T cd00609         133 TKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLR  212 (350)
T ss_pred             ceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccc
Confidence            6888887533  25777777665   79999999999999998744321                1222 22       1


Q ss_pred             Cchhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCe
Q psy10669        175 GEKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVH  251 (337)
Q Consensus       175 Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h  251 (337)
                      .|+++.   ++.+.+.... +...++++.+...++..+++... ..++..++++.++++++.+.|.+.+...........
T Consensus       213 ~G~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~g~  290 (350)
T cd00609         213 IGYLIAPPEELLERLKKLL-PYTTSGPSTLSQAAAAAALDDGE-EHLEELRERYRRRRDALLEALKELGPLVVVKPSGGF  290 (350)
T ss_pred             eEEEecCHHHHHHHHHHHH-HhcccCCChHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCccE
Confidence            256654   3666666543 23356778888888877776653 466888999999999999999997765422223455


Q ss_pred             EEEEEecCCCcchHHHHHHHhhcCceeccCc--------ccchhh
Q psy10669        252 LILIDLRKNKLTGSKVELVLEEIAIACNKNT--------GISLAA  288 (337)
Q Consensus       252 ~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~--------girig~  288 (337)
                      .+++.+... .+...+.+.|.++||.+....        .|||+.
T Consensus       291 ~~~~~~~~~-~~~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~  334 (350)
T cd00609         291 FLWLDLPEG-DDEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSF  334 (350)
T ss_pred             EEEEecCCC-ChHHHHHHHHHhCCEEEecccccccCCCCeEEEEe
Confidence            666666543 256778889999999988642        577753

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi

>TIGR01328 met_gam_lyase methionine gamma-lyase

Probab=99.05  E-value=3.4e-09  Score=104.42  Aligned_cols=193  Identities=14%  Similarity=0.102  Sum_probs=126.2

Q ss_pred             ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669         70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------  119 (337)
Q Consensus        70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------  119 (337)
                      |+...+++|    +++++++|.++     ++.+.||+.|+..++.+++++                              
T Consensus        57 ~~p~~~~le----~~lA~l~g~~~-----av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~  127 (391)
T TIGR01328        57 GNPTVSNLE----GRIAFLEGTEA-----AVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTKFGIQVD  127 (391)
T ss_pred             CCchHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhcCCeEEE
Confidence            556678888    58899999986     688999999999888888654                              


Q ss_pred             ----------ccc---cccEEEEc-Ccc-cccccChHHHHHHhhhcCCeEEEeccccccccc--------eeeee-cc--
Q psy10669        120 ----------NNA---RFDFLSSG-TTC-YSRCLDYARFRQICDETDSIMFADMSHISGLIA--------GVKGV-TK--  173 (337)
Q Consensus       120 ----------~~a---~pklII~~-~S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~--------g~~~T-~~--  173 (337)
                                +.+   ++|+|++. +++ .+...|+++|.++|+++|+++++|++|..|+..        .++++ +|  
T Consensus       128 ~vd~~d~e~l~~~i~~~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD~a~a~~~~~~~~~~g~Divv~S~sK~l  207 (391)
T TIGR01328       128 FINMAIPEEVKAHIKDNTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVDNTFATPMLTNPVALGVDVVVHSATKYI  207 (391)
T ss_pred             EECCCCHHHHHHhhccCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCchhccCCchhcCCCEEEccccccc
Confidence                      001   26788775 333 357789999999999999999999999988764        12222 22  


Q ss_pred             ------CCchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCE-E
Q psy10669        174 ------TGEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYH-V  243 (337)
Q Consensus       174 ------~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~-v  243 (337)
                            .||+++.  ++.+++.........|+...+..|+++..  .+  .....+.++..+|++++++.|.+. ++. |
T Consensus       208 gg~g~~~gG~v~~~~~li~~l~~~~~~~~~g~~l~~~~a~l~l~--~L--~tl~~r~~~~~~na~~la~~L~~~p~v~~v  283 (391)
T TIGR01328       208 GGHGDVVAGLICGKAELLQQIRMVGIKDMTGSVISPFDAWLILR--GL--KTLNIRMKRHSENAMKVAEYLKSHPAVEKV  283 (391)
T ss_pred             cCCCCceEEEEEcCHHHHHHHHHHHHHhCCCCCCCcHHHHHHHh--Cc--CcHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence                  1577665  45555543212223344445555554432  22  234577899999999999999983 454 3


Q ss_pred             ecCCCCCe---------------EEEEEecCCCcchHHHHHHHhhcCcee
Q psy10669        244 VTGGTDVH---------------LILIDLRKNKLTGSKVELVLEEIAIAC  278 (337)
Q Consensus       244 ~~~~t~~h---------------~v~V~~~~~~~~~~~~~~~L~~~gI~v  278 (337)
                      ...+..+|               ++.++++  + +...+.+.++...+..
T Consensus       284 ~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~--~-~~~~~~~f~~~l~~~~  330 (391)
T TIGR01328       284 YYPGFEDHPGHDIAAKQMRMGGGMITFELK--G-GFAGAKKLLNNLKLIR  330 (391)
T ss_pred             ECCCCCCCccHHHHHHhCCCCCceEEEEeC--C-CHHHHHHHHHhCCcce
Confidence            33344444               5555554  2 3345566666655443

This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.

>PLN02452 phosphoserine transaminase

Probab=99.05  E-value=4.2e-08  Score=95.81  Aligned_cols=253  Identities=15%  Similarity=0.081  Sum_probs=152.2

Q ss_pred             cccceeeeccCCCCCHHHHHHHhhhhhhccCCCCC-CCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeec--CCC
Q psy10669         29 QINGIELIASENFTSLAVLECLGSCLQNKYSEGLP-GKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQP--YSG  105 (337)
Q Consensus        29 q~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~-g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~--~Sg  105 (337)
                      |.+.+++.|-=-.+|+.|++++...+.+--+.|.. -.-.++..+ ..++-..+++.++++|+.+.. |  .|.|  .||
T Consensus         5 ~~~~~~f~pGP~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~-f~~i~~~~~~~L~~l~~~p~~-y--~v~~l~Gsg   80 (365)
T PLN02452          5 QGRVFNFSAGPATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKE-FLSIIQKAEADLRELLDIPDN-Y--EVLFLQGGA   80 (365)
T ss_pred             CCceEeeeCCCCCCCHHHHHHHHHHHhcccccCccccccCCCchH-HHHHHHHHHHHHHHHhCCCCC-c--eEEEEeCcc
Confidence            33457888888889999999999876642112210 111122222 345666677899999998532 3  3444  455


Q ss_pred             chhHHHHHHhhCCc-----------------cccc------------------------------ccEEEEc--Cccccc
Q psy10669        106 SPANFAVCEKALPT-----------------NNAR------------------------------FDFLSSG--TTCYSR  136 (337)
Q Consensus       106 t~AN~~v~~aLl~~-----------------~~a~------------------------------pklII~~--~S~~~~  136 (337)
                      |.++-++...|+++                 +.++                              ++.|.+.  +++.+.
T Consensus        81 t~~~ea~~~nl~~~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~hnETstGv  160 (365)
T PLN02452         81 STQFAAIPLNLCKPGDKADFVVTGSWSKKAAKEAKKYCKTNVIASGKDEKYTKIPSVSEWELTPDAKFVHICANETIHGV  160 (365)
T ss_pred             HHHHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCCChHHcCCCCCCcEEEECCCCCCCcE
Confidence            88888888888753                 0010                              1222222  333333


Q ss_pred             c-cChHHHHHHhhhcCCeEEEeccccccccc------eeeee--c----cCC-chhh-h-hHHHHHhhc---cCC-----
Q psy10669        137 C-LDYARFRQICDETDSIMFADMSHISGLIA------GVKGV--T----KTG-EKIL-Y-DYEEKINNA---VFP-----  192 (337)
Q Consensus       137 ~-~d~~~l~eia~~~ga~l~vD~AH~~Gli~------g~~~T--~----~~G-g~i~-~-~l~~~i~~~---~~p-----  192 (337)
                      . -|   +.+++   +++++||+++++|...      ++.++  +    |.| |++. . ++.+++...   .++     
T Consensus       161 ~~~~---~~~i~---~~~lvVDa~Ss~g~~pidv~~~~v~~~saqK~lGP~Gl~~v~vr~~~l~~~~~~~~~~~~~~~~~  234 (365)
T PLN02452        161 EFKD---YPDVG---NVPLVADMSSNFLSKPVDVSKYGVIYAGAQKNVGPSGVTIVIIRKDLIGNARPITPGMLDYKIHA  234 (365)
T ss_pred             ecCc---ccccC---CCeEEEECCccccCcccCHHHcCEEEEecccccCCCCeEEEEEcHHHHhhcccCCCchhhHHHHH
Confidence            2 22   22332   3899999999999887      33222  2    334 3333 2 343332211   111     


Q ss_pred             ---CCCCCCcHHHHHHHHHHHHHHhch-hhHHHHHHHHHHHHHHHHHHHh-CCCEEecCC-C-CCe-EEEEEecCCCcch
Q psy10669        193 ---SLQGGPHNHAIGAIATAMLQAQSD-EFKSYQAQVKANASHLSDEMIK-RGYHVVTGG-T-DVH-LILIDLRKNKLTG  264 (337)
Q Consensus       193 ---~~~g~~~~~~iaala~a~~e~~~~-~~~~y~~~v~~na~~l~~~L~~-~G~~v~~~~-t-~~h-~v~V~~~~~~~~~  264 (337)
                         .+..||+.+.+.++..+++++.+. ..+...++..+++++|.+.|.+ .||-..... . .+. +++..+.... .-
T Consensus       235 ~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~~~~~~~rs~~~vsF~~~~~~-~~  313 (365)
T PLN02452        235 ENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNGFYVCPVEKSVRSLMNVPFTLGGSE-LE  313 (365)
T ss_pred             hcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChHHhCCeEEEEEcCCch-hH
Confidence               123799999999999999999764 5688999999999999999998 577111110 1 122 3333333333 44


Q ss_pred             HHHHHHHhhcCceeccCc----ccchhh-hhHh
Q psy10669        265 SKVELVLEEIAIACNKNT----GISLAA-EIQA  292 (337)
Q Consensus       265 ~~~~~~L~~~gI~v~~~~----girig~-~~~t  292 (337)
                      .+..+.+++.|+..-+-.    |+|+++ ++++
T Consensus       314 ~~f~~~~~~~g~~~~~G~r~~gg~R~s~yna~~  346 (365)
T PLN02452        314 AEFVKEAAKAGMVQLKGHRSVGGMRASIYNAMP  346 (365)
T ss_pred             HHHHHHHHHCCCcccCCccccCceEEECcCCCC
Confidence            566677777899876533    888875 4454

>PLN02242 methionine gamma-lyase

Probab=99.05  E-value=4.8e-09  Score=104.24  Aligned_cols=164  Identities=12%  Similarity=0.058  Sum_probs=113.3

Q ss_pred             ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669         70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------  119 (337)
Q Consensus        70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------  119 (337)
                      ++....++|    +++++++|.++     .+.++||+.|+..++.+++++                              
T Consensus        74 ~~Pt~~~LE----~~lA~l~g~~~-----~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~  144 (418)
T PLN02242         74 FNPTVLNLG----RQMAALEGTEA-----AYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITT  144 (418)
T ss_pred             CChhHHHHH----HHHHHHhCCCe-----EEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceE
Confidence            567778888    58899999986     577899999999999998754                              


Q ss_pred             -----------c--c-c-cccEEEEc-Ccc-cccccChHHHHHHhhhcCCeEEEeccccccccc----e---eeeec-c-
Q psy10669        120 -----------N--N-A-RFDFLSSG-TTC-YSRCLDYARFRQICDETDSIMFADMSHISGLIA----G---VKGVT-K-  173 (337)
Q Consensus       120 -----------~--~-a-~pklII~~-~S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~----g---~~~T~-~-  173 (337)
                                 +  + . ++|+|++. .++ .+...|+++|.++|+++|+++++|++|..+.+.    |   ++++. | 
T Consensus       145 ~~~d~~d~e~l~~~i~~~~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livDea~~~~~~~~~~~g~divv~S~SK~  224 (418)
T PLN02242        145 TFVDITDLEAVKKAVVPGKTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVDNTFAPMVLSPARLGADVVVHSISKF  224 (418)
T ss_pred             EEcCCCCHHHHHHhcCcCCCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEECCCCccCCCHHHcCCcEEEEeCccc
Confidence                       1  1 1 25777776 222 246779999999999999999999999755443    1   22222 2 


Q ss_pred             -------CCchhhh--hHHHHHhhccCC--CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCE
Q psy10669        174 -------TGEKILY--DYEEKINNAVFP--SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYH  242 (337)
Q Consensus       174 -------~Gg~i~~--~l~~~i~~~~~p--~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~  242 (337)
                             .||++++  ++.+.+......  ...|.+..+..|++..-  .+  ......+++..+|++++++.|.+.|++
T Consensus       225 l~g~g~~~gG~iv~~~~li~~l~~~~~~~~~~~g~~~~~~~A~l~~~--~l--~tl~~r~~~~~~~a~~la~~L~~~~~~  300 (418)
T PLN02242        225 ISGGADIIAGAVCGPAELVNSMMDLHHGALMLLGPTMNPKVAFELSE--RL--PHLSLRMKEHCRRAMEYAKRMKELGLK  300 (418)
T ss_pred             cCCCCCceEEEEEcCHHHHHHHHHHhhhhhhccCCCCCHHHHHHHHc--CC--CcHHHHHHHHHHHHHHHHHHHHhCCCE
Confidence                   1577765  455555533111  12455555666654432  22  245667889999999999999999999


Q ss_pred             EecC
Q psy10669        243 VVTG  246 (337)
Q Consensus       243 v~~~  246 (337)
                      |...
T Consensus       301 V~yP  304 (418)
T PLN02242        301 VIYP  304 (418)
T ss_pred             EECC
Confidence            8863

>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial

Probab=99.03  E-value=8.2e-09  Score=101.27  Aligned_cols=190  Identities=11%  Similarity=0.021  Sum_probs=123.8

Q ss_pred             CccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc-----------------------------
Q psy10669         69 GGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT-----------------------------  119 (337)
Q Consensus        69 ~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~-----------------------------  119 (337)
                      .|+...+.+|    ++++++.|.++     .+.++||+.|+..++.+++++                             
T Consensus        47 ~gnPt~~~lE----~~lA~l~g~~~-----~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v  117 (377)
T TIGR01324        47 RGTLTHFALQ----DAMCELEGGAG-----CYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCDIVLKRMGVDI  117 (377)
T ss_pred             CCCccHHHHH----HHHHHHhCCCc-----EEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHHhcCcEE
Confidence            4777888899    57889999885     678889999999999998764                             


Q ss_pred             -----------ccc---cccEEEEc-Ccc-cccccChHHHHHHhhhcCCeEEEeccccccccc-----e---ee-eecc-
Q psy10669        120 -----------NNA---RFDFLSSG-TTC-YSRCLDYARFRQICDETDSIMFADMSHISGLIA-----G---VK-GVTK-  173 (337)
Q Consensus       120 -----------~~a---~pklII~~-~S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----g---~~-~T~~-  173 (337)
                                 +.+   ++|+|++. .++ .+...|+++|.++|+++|++++||++|..|++.     |   ++ +.+| 
T Consensus       118 ~~~d~~~~e~l~~~i~~~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD~t~a~g~~~~pl~~gaDivv~S~tK~  197 (377)
T TIGR01324       118 TYYDPLIGEDIATLIQPNTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMIDNTWAAGLLFKPLEHGVDISIQAGTKY  197 (377)
T ss_pred             EEECCCCHHHHHHhcCCCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccccCccccCceEEEecCcee
Confidence                       001   26888876 333 246778888999999999999999999999885     2   22 2222 


Q ss_pred             -------CCchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CC-E
Q psy10669        174 -------TGEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GY-H  242 (337)
Q Consensus       174 -------~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~-~  242 (337)
                             .||++..  ++.+++...  ....|+...|.-+.+..  .-+  .....++++..+||..+++.|.+. .+ +
T Consensus       198 l~G~~d~~gG~v~~~~~~~~~l~~~--~~~~G~~l~p~~a~~~~--rgl--~tl~~R~~~~~~~a~~la~~L~~~p~v~~  271 (377)
T TIGR01324       198 LVGHSDIMIGTVVANARTWDQLREH--SYLMGQMVDADDAYTTL--RGL--RTLGVRLKQHQESSLAIAKWLSEQPEVAR  271 (377)
T ss_pred             ccCCCCceEEEEEeCHHHHHHHHHH--HHHhCCCCCHHHHHHHH--hhh--hhHHHHHHHHHHHHHHHHHHHHhCCCcCE
Confidence                   2566654  344444422  12345554454443332  222  234577999999999999999984 22 3


Q ss_pred             EecCC---------------CCCeEEEEEecCCCcchHHHHHHHhhcC
Q psy10669        243 VVTGG---------------TDVHLILIDLRKNKLTGSKVELVLEEIA  275 (337)
Q Consensus       243 v~~~~---------------t~~h~v~V~~~~~~~~~~~~~~~L~~~g  275 (337)
                      |+..+               .-.+++.+.+...  +...+.+.++...
T Consensus       272 v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~--~~~~~~~~~~~l~  317 (377)
T TIGR01324       272 VLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRL--TQKQVHAFLDHLQ  317 (377)
T ss_pred             EECCCCCCCccHHHHHHhccCCCceEEEEECCC--CHHHHHHHHHhCC
Confidence            33321               2367888887531  2334455555533

This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.

>TIGR01141 hisC histidinol-phosphate aminotransferase

Probab=99.03  E-value=6e-08  Score=93.22  Aligned_cols=222  Identities=18%  Similarity=0.164  Sum_probs=141.2

Q ss_pred             cceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCc-h
Q psy10669         31 NGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGS-P  107 (337)
Q Consensus        31 ~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt-~  107 (337)
                      .-|+|-.++|-.  +|.+++++.......  ..++      ... ..++    |+.++++++++.    .++.+++|+ +
T Consensus        20 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~--~~y~------~~~-~~~l----r~~ia~~~~~~~----~~i~~~~G~~~   82 (346)
T TIGR01141        20 EVIKLNSNENPFGPPPKAKEALRAEADKL--HRYP------DPD-PAEL----KQALADYYGVDP----EQILLGNGSDE   82 (346)
T ss_pred             ceEEccCCCCCCCCCHHHHHHHHHhHHHh--hcCC------CCC-HHHH----HHHHHHHhCcCh----HHEEEcCCHHH
Confidence            345555555444  889999988653211  1111      111 1233    467889999765    368888884 6


Q ss_pred             hHHHHHHhhCCc-----------------------------------------ccc---cccEEEEcCccc--ccccChH
Q psy10669        108 ANFAVCEKALPT-----------------------------------------NNA---RFDFLSSGTTCY--SRCLDYA  141 (337)
Q Consensus       108 AN~~v~~aLl~~-----------------------------------------~~a---~pklII~~~S~~--~~~~d~~  141 (337)
                      +...++.+++++                                         +.+   ++++|+++..++  +...|.+
T Consensus        83 ~l~~~~~~l~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~~  162 (346)
T TIGR01141        83 IIELLIRAFLEPGDAVLVPPPTYSMYEISAKIHGAEVVKVPLDEDGQLDLEDILVAIDDKPKLVFLCSPNNPTGNLLSRS  162 (346)
T ss_pred             HHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEeccCCCCCCCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHH
Confidence            766666777543                                         001   267777763333  5889999


Q ss_pred             HHHHHhhhc--CCeEEEeccccccccc--------------eeeeec-c----CC---chhhh--hHHHHHhhccCCCCC
Q psy10669        142 RFRQICDET--DSIMFADMSHISGLIA--------------GVKGVT-K----TG---EKILY--DYEEKINNAVFPSLQ  195 (337)
Q Consensus       142 ~l~eia~~~--ga~l~vD~AH~~Gli~--------------g~~~T~-~----~G---g~i~~--~l~~~i~~~~~p~~~  195 (337)
                      ++.++|+.+  |+++++|++|. ++..              .+.++. |    .|   |+++.  ++.+.+.+...+  .
T Consensus       163 ~~~~l~~~~~~~~~ii~D~~y~-~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~--~  239 (346)
T TIGR01141       163 DIEAVLERTPEDALVVVDEAYG-EFSGEPSTLPLLAEYPNLIVLRTLSKAFGLAGLRIGYAIANAEIIDALNKVRAP--F  239 (346)
T ss_pred             HHHHHHHhCCCCcEEEEECchh-hhcCCccHHHHHhhCCCEEEEehhhHhhhchhhhceeeecCHHHHHHHHhccCC--C
Confidence            999999887  99999999987 2211              112232 2    13   56554  566666654333  2


Q ss_pred             CCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhc
Q psy10669        196 GGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEI  274 (337)
Q Consensus       196 g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~  274 (337)
                       +.+++...+...++...  ..+++.++++.++.+++.+.|.+. |+++..  .....+++++..   +..++.+.|.+.
T Consensus       240 -~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~--~~g~~~~~~~~~---~~~~~~~~L~~~  311 (346)
T TIGR01141       240 -NLSRLAQAAAIAALRDD--DFIEKTVEEINAERERLYDGLKKLPGLEVYP--SDANFVLIRFPR---DADALFEALLEK  311 (346)
T ss_pred             -CCCHHHHHHHHHHhCCH--HHHHHHHHHHHHHHHHHHHHHHhcCCCEECC--CcCCEEEEecCC---CHHHHHHHHHHC
Confidence             33445555544444332  135778889999999999999986 888764  445677887764   577888889999


Q ss_pred             Cceecc
Q psy10669        275 AIACNK  280 (337)
Q Consensus       275 gI~v~~  280 (337)
                      ||.+.+
T Consensus       312 gI~v~~  317 (346)
T TIGR01141       312 GIIVRD  317 (346)
T ss_pred             CeEEEe
Confidence            999875

Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.

>PTZ00125 ornithine aminotransferase-like protein; Provisional

Probab=99.00  E-value=9.4e-08  Score=93.82  Aligned_cols=228  Identities=15%  Similarity=0.115  Sum_probs=133.9

Q ss_pred             CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhC----
Q psy10669         42 TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL----  117 (337)
Q Consensus        42 ~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl----  117 (337)
                      .+|.|.+++...+. ++..+   ++.+ .+....++|    +.++++++.+.     .+.++|||.||.+++..+.    
T Consensus        48 ~~p~v~~a~~~~~~-~~~~~---~~~~-~~~~~~~~~----~~l~~~~~~~~-----~~~~~SGs~A~e~al~~~~~~~~  113 (400)
T PTZ00125         48 CHPKILAALINQAQ-KLTLT---SRAF-YNDVLGLAE----KYITDLFGYDK-----VLPMNSGAEAGETALKFARKWGY  113 (400)
T ss_pred             CCHHHHHHHHHHHH-hcccc---cccc-cCHHHHHHH----HHHHhCCCCCE-----EEEeCCcHHHHHHHHHHHHHHHH
Confidence            49999999987643 44322   2222 122233444    57788888753     5778999999988887552    


Q ss_pred             -------Cc------------------------------------------------c--c--ccccEEEEcCc--cccc
Q psy10669        118 -------PT------------------------------------------------N--N--ARFDFLSSGTT--CYSR  136 (337)
Q Consensus       118 -------~~------------------------------------------------~--~--a~pklII~~~S--~~~~  136 (337)
                             ++                                                +  +  .++++|++.+.  .-++
T Consensus       114 ~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~v~~ep~~~~~G~  193 (400)
T PTZ00125        114 EVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQDPNVAAFIVEPIQGEAGV  193 (400)
T ss_pred             hccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCCCCeEEEEEcCccCCCCC
Confidence                   11                                                0  0  01467777532  2245


Q ss_pred             ccC----hHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeecc--CCch-----hhh--hHHHHHhhcc
Q psy10669        137 CLD----YARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTK--TGEK-----ILY--DYEEKINNAV  190 (337)
Q Consensus       137 ~~d----~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~--~Gg~-----i~~--~l~~~i~~~~  190 (337)
                      ..+    +++|+++|+++|++|++|+.|+ .|--+        +    +....|  .||+     ++.  ++.+.+....
T Consensus       194 ~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~~~~~~~~pd~~~~sK~l~~g~~~ig~v~~~~~~~~~~~~~~  273 (400)
T PTZ00125        194 IVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLAHDHEGVKPDIVLLGKALSGGLYPISAVLANDDVMLVIKPGE  273 (400)
T ss_pred             ccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhHHHhcCCCCCEEEEcccccCCCcCcEEEEEcHHHHhhccCCC
Confidence            555    8889999999999999999995 23111        1    111122  1232     222  5656555432


Q ss_pred             CCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC----CCE-EecCCCCCeEEEEEecC-CCcch
Q psy10669        191 FPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR----GYH-VVTGGTDVHLILIDLRK-NKLTG  264 (337)
Q Consensus       191 ~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~----G~~-v~~~~t~~h~v~V~~~~-~~~~~  264 (337)
                      ....+ +.++...++...++..+.+.   .+.+++.+..+++++.|.+.    ++. .+.  ....+..|.+.. .+.+.
T Consensus       274 ~~~t~-~~~~~~~~aa~~~l~~i~~~---~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~--~~g~~~~v~~~~~~~~~~  347 (400)
T PTZ00125        274 HGSTY-GGNPLACAVAVEALEVLKEE---KLAENAQRLGEVFRDGLKELLKKSPWVKEIR--GKGLLNAIVFDHSDGVNA  347 (400)
T ss_pred             CCCCC-CcCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHhcCCCeEEEe--cccEEEEEEEccCcchHH
Confidence            22233 34455555555556555432   35667777888888888763    321 111  234455565653 23456


Q ss_pred             HHHHHHHhhcCceeccCc--ccchhhh
Q psy10669        265 SKVELVLEEIAIACNKNT--GISLAAE  289 (337)
Q Consensus       265 ~~~~~~L~~~gI~v~~~~--girig~~  289 (337)
                      ..+.+.|.+.||.+.+..  .|||+.+
T Consensus       348 ~~~~~~l~~~Gv~v~~~~~~~lRi~~~  374 (400)
T PTZ00125        348 WDLCLKLKENGLLAKPTHDNIIRFAPP  374 (400)
T ss_pred             HHHHHHHHHCCeEEeecCCCEEEEECC
Confidence            667777878899997643  6888755

>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional

Probab=99.00  E-value=9.3e-08  Score=94.11  Aligned_cols=226  Identities=13%  Similarity=0.090  Sum_probs=132.6

Q ss_pred             CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhC-----
Q psy10669         43 SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL-----  117 (337)
Q Consensus        43 ~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl-----  117 (337)
                      +|.|.+|+...+. ++..+   ++.+ .+....+++    ++++++++.+.     .+.+.||+.||.+++....     
T Consensus        58 ~p~v~~ai~~~~~-~~~~~---~~~~-~~~~~~~l~----~~l~~~~~~~~-----~~~~~SGseA~e~Alk~a~~~~~~  123 (396)
T PRK04073         58 HPKIIQALKDQAD-KVTLT---SRAF-HSDQLGPWY----EKVAKLTGKDM-----VLPMNTGAEAVETAIKAARRWAYD  123 (396)
T ss_pred             CHHHHHHHHHHHh-hcccc---cccc-CCHHHHHHH----HHHHhcCCCCe-----EEEcCChHHHHHHHHHHHHHHhhh
Confidence            8999999887643 44322   2221 222223444    57778887653     5777899999887766541     


Q ss_pred             ------Cc----------------------------------------------ccc-----cccEEEEcCccc--cccc
Q psy10669        118 ------PT----------------------------------------------NNA-----RFDFLSSGTTCY--SRCL  138 (337)
Q Consensus       118 ------~~----------------------------------------------~~a-----~pklII~~~S~~--~~~~  138 (337)
                            ++                                              .+.     ++++||+.+-..  +...
T Consensus       124 ~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~viiep~~~~~G~~~  203 (396)
T PRK04073        124 VKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPYGDLEALKAAITPNTAAFLVEPIQGEAGINI  203 (396)
T ss_pred             ccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCCCCHHHHHHhcccCeEEEEEcCccCCCCCcc
Confidence                  11                                              000     146777764221  2333


Q ss_pred             C----hHHHHHHhhhcCCeEEEecccc-ccccc--------ee----eeeccC--Cc-----hhhh--hHHHHHhhccCC
Q psy10669        139 D----YARFRQICDETDSIMFADMSHI-SGLIA--------GV----KGVTKT--GE-----KILY--DYEEKINNAVFP  192 (337)
Q Consensus       139 d----~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g~----~~T~~~--Gg-----~i~~--~l~~~i~~~~~p  192 (337)
                      |    +++|+++|+++|++|++|++|+ .|--+        ++    ....|.  ||     ++++  ++.+.+......
T Consensus       204 ~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~pdi~~~sK~lg~gg~~ig~~~~~~~i~~~~~~~~~~  283 (396)
T PRK04073        204 PPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFACDWDNVTPDMYILGKALGGGVFPISCVAANRDILGVFTPGSHG  283 (396)
T ss_pred             CCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHHHhhhcCCCCCEEEecccccCCCCcceEEEEcHHHHhhhcCCCCC
Confidence            3    7789999999999999999998 33211        10    111121  12     2222  465655543222


Q ss_pred             CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecC-CCCCeEEEEEecCCCcchHHHHHHH
Q psy10669        193 SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTG-GTDVHLILIDLRKNKLTGSKVELVL  271 (337)
Q Consensus       193 ~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~-~t~~h~v~V~~~~~~~~~~~~~~~L  271 (337)
                      ..++ .++...++..+++..+.+   ..+.+++.++.++|.+.|++.++..+.. .....++.+++..   +..++.+.|
T Consensus       284 ~t~~-~~~~~~aaa~aaL~~~~~---~~l~~~~~~~~~~l~~~L~~l~~~~i~~~~~~g~~~~~~~~~---~~~~~~~~l  356 (396)
T PRK04073        284 STFG-GNPLACAVSIAALEVLEE---EKLPERSLELGEYFKEQLKEIDNPMIKEVRGRGLFIGVELNE---PARPYCEAL  356 (396)
T ss_pred             CCCC-CCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHhhcCCcccceecceEEEEEEecc---hHHHHHHHH
Confidence            3333 456666666666655533   2456778888999999998865432221 1234566666642   456777888


Q ss_pred             hhcCceeccCc--ccchhhh
Q psy10669        272 EEIAIACNKNT--GISLAAE  289 (337)
Q Consensus       272 ~~~gI~v~~~~--girig~~  289 (337)
                      .+.||.+....  .|||..+
T Consensus       357 ~~~Gv~~~~~~~~~iRi~p~  376 (396)
T PRK04073        357 KEEGLLCKETHETVIRFAPP  376 (396)
T ss_pred             HHCCeEEecCCCCEEEEECC
Confidence            88899997533  5788754

>PRK03244 argD acetylornithine aminotransferase; Provisional

Probab=99.00  E-value=7.7e-08  Score=94.52  Aligned_cols=230  Identities=17%  Similarity=0.107  Sum_probs=136.6

Q ss_pred             CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc---
Q psy10669         43 SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT---  119 (337)
Q Consensus        43 ~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~---  119 (337)
                      +|.+.+++...+. +++  ....+ |. .....+++    ++++++++.+.++  ..+..+||++||.+++..+..+   
T Consensus        61 ~p~v~~ai~~~~~-~~~--~~~~~-~~-~~~~~~la----~~l~~~~~~~~~~--~v~~~~sgsea~~~al~~~~~~g~~  129 (398)
T PRK03244         61 HPAVVEAVTRQLA-TLG--HVSNL-FA-TEPQIALA----ERLVELLGAPEGG--RVFFCNSGAEANEAAFKLARLTGRT  129 (398)
T ss_pred             CHHHHHHHHHHHH-hcc--CccCc-cC-CHHHHHHH----HHHHHhCCCCCCC--EEEEeCchHHHHHHHHHHHHHHCCC
Confidence            6999999987644 443  22222 22 22223343    4777888854211  2344467799998887744210   


Q ss_pred             -----------------------------------------------ccc---cccEEEEcCcc--cccccC----hHHH
Q psy10669        120 -----------------------------------------------NNA---RFDFLSSGTTC--YSRCLD----YARF  143 (337)
Q Consensus       120 -----------------------------------------------~~a---~pklII~~~S~--~~~~~d----~~~l  143 (337)
                                                                     +..   ++++||+.+..  -+...|    +++|
T Consensus       130 ~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~aviiep~~~~~G~~~~~~~~l~~l  209 (398)
T PRK03244        130 KIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPYGDVDALAAAVDDDTAAVFLEPIQGEAGVVPPPAGYLAAA  209 (398)
T ss_pred             eEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCCCCHHHHHHhhcCCeEEEEEecccCCCCCcCCCHHHHHHH
Confidence                                                           000   14567775332  133444    7789


Q ss_pred             HHHhhhcCCeEEEecccccccc--c--------e----eeeec-------cCCchhhh-hHHHHHhhccCCCCCCCCcHH
Q psy10669        144 RQICDETDSIMFADMSHISGLI--A--------G----VKGVT-------KTGEKILY-DYEEKINNAVFPSLQGGPHNH  201 (337)
Q Consensus       144 ~eia~~~ga~l~vD~AH~~Gli--~--------g----~~~T~-------~~Gg~i~~-~l~~~i~~~~~p~~~g~~~~~  201 (337)
                      +++|+++|++|++|++|+ |+-  +        +    +.+..       +-|+++.. ++.+.+........+ +.++.
T Consensus       210 ~~l~~~~~~llI~DEv~~-g~gr~g~~~~~~~~~~~pDi~t~sK~l~~G~~ig~~~~~~~~~~~~~~~~~~~t~-~~~~~  287 (398)
T PRK03244        210 REITDRHGALLVLDEVQT-GIGRTGAWFAHQHDGVTPDVVTLAKGLGGGLPIGACLAFGPAADLLTPGLHGSTF-GGNPV  287 (398)
T ss_pred             HHHHHHcCCEEEEecccc-CCcccchHHhhhhhCCCCCEEEEchhhhCCcccEEEEEcHHHHhhccCCCCcCCC-CCCHH
Confidence            999999999999999996 431  1        1    11111       23444443 566666543333334 34555


Q ss_pred             HHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEec-CCCCCeEEEEEecCCCcchHHHHHHHhhcCceecc
Q psy10669        202 AIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVT-GGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNK  280 (337)
Q Consensus       202 ~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~-~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~  280 (337)
                      ..++...++..+.+   .++.+++.+..++|.+.|.+.++.++. ......++.+.+...  ....+.+.|.+.||.+.+
T Consensus       288 ~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~v~g~g~~~~i~~~~~--~~~~~~~~l~~~Gv~~~~  362 (398)
T PRK03244        288 ACAAALAVLDTIAS---EGLLENAERLGEQLRAGIEALGHPLVDHVRGRGLLLGIVLTAP--VAKAVEAAAREAGFLVNA  362 (398)
T ss_pred             HHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHhcCCCceeeEeeccEEEEEEEecc--HHHHHHHHHHHCCeEEee
Confidence            66666666655532   357888899999999999987664332 112456777777432  456677888888999976


Q ss_pred             Cc--ccchhhhh
Q psy10669        281 NT--GISLAAEI  290 (337)
Q Consensus       281 ~~--girig~~~  290 (337)
                      ..  .|||+.+.
T Consensus       363 ~~~~~iR~~p~~  374 (398)
T PRK03244        363 VAPDVIRLAPPL  374 (398)
T ss_pred             cCCCEEEEECCC
Confidence            43  78887554

>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed

Probab=98.97  E-value=1.1e-08  Score=101.14  Aligned_cols=198  Identities=18%  Similarity=0.178  Sum_probs=123.6

Q ss_pred             CCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc---------------------
Q psy10669         61 GLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT---------------------  119 (337)
Q Consensus        61 g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~---------------------  119 (337)
                      |+..+|+  ++...+++|    +++++++|+++     ++.+.||+.|+..++.+++++                     
T Consensus        56 ~~~y~r~--~~p~~~~Le----~~lA~l~G~~~-----~~~~~sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~  124 (398)
T PRK07504         56 GFIYSRY--SNPTVDMFE----KRMCALEGAED-----ARATASGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVETL  124 (398)
T ss_pred             CceeecC--CCchHHHHH----HHHHHHhCCCe-----eeEecCHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHHHH
Confidence            3444443  455667787    58889999987     456889999988777777654                     


Q ss_pred             -------------------ccc---cccEEEEcCccc--ccccChHHHHHHhhhcCCeEEEeccccccccc-----e---
Q psy10669        120 -------------------NNA---RFDFLSSGTTCY--SRCLDYARFRQICDETDSIMFADMSHISGLIA-----G---  167 (337)
Q Consensus       120 -------------------~~a---~pklII~~~S~~--~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----g---  167 (337)
                                         +.+   ++|+|++...++  +...|+++|.++|+++|++++||++|..|+..     |   
T Consensus       125 ~~~~G~~v~~vd~~d~e~l~~ai~~~tklV~lesp~NptG~v~dl~~I~~la~~~gi~lvvD~a~a~~~~~~~~~~gaDi  204 (398)
T PRK07504        125 LPRYGIESTLVDGLDLDNWEKAVRPNTKVFFLESPTNPTLEVIDIAAVAKIANQAGAKLVVDNVFATPLFQKPLELGAHI  204 (398)
T ss_pred             HhhcCeEEEEECCCCHHHHHHhcCcCceEEEEECCCCCCcEecCHHHHHHHHHHcCCEEEEECCccccccCCchhhCCCE
Confidence                               001   268888763333  58899999999999999999999999987754     1   


Q ss_pred             e-eeecc--------CCchhhh--hH-HHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHH
Q psy10669        168 V-KGVTK--------TGEKILY--DY-EEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDE  235 (337)
Q Consensus       168 ~-~~T~~--------~Gg~i~~--~l-~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~  235 (337)
                      + .|.+|        .||++++  ++ .+.+.....  ..|....+..|+++..  .+  .....+.++..+|++.+++.
T Consensus       205 vv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~~~~--~~g~~~s~~~A~~~l~--~L--~tl~~R~~~~~~na~~la~~  278 (398)
T PRK07504        205 VVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQDYFR--HTGPSLSPFNAWTLLK--GL--ETLPVRVRQQTESAAAIADF  278 (398)
T ss_pred             EEeeccccccCCccceEEEEEeCcHHHHHHHHHHHH--HhCCCCCHHHHHHHHh--cc--chHHHHHHHHHHHHHHHHHH
Confidence            2 22222        2567765  33 333332111  1233334444444332  22  23567788888999999999


Q ss_pred             HHhC-CCE-EecCCCCCe---------------EEEEEecCCCcchHHHHHHHhhcCcee
Q psy10669        236 MIKR-GYH-VVTGGTDVH---------------LILIDLRKNKLTGSKVELVLEEIAIAC  278 (337)
Q Consensus       236 L~~~-G~~-v~~~~t~~h---------------~v~V~~~~~~~~~~~~~~~L~~~gI~v  278 (337)
                      |.+. ++. |...+-.+|               ++.+++.  + +...+.+.++...+..
T Consensus       279 L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~--~-~~~~~~~~~~~l~~~~  335 (398)
T PRK07504        279 LAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELK--G-GKEAAFRFLNALKIVR  335 (398)
T ss_pred             HHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeC--C-CHHHHHHHHHhCCcce
Confidence            9984 453 444443344               5666664  2 3445556666655443

>PRK02731 histidinol-phosphate aminotransferase; Validated

Probab=98.97  E-value=1.6e-07  Score=91.09  Aligned_cols=234  Identities=15%  Similarity=0.129  Sum_probs=145.2

Q ss_pred             ccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCch
Q psy10669         30 INGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSP  107 (337)
Q Consensus        30 ~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~  107 (337)
                      +.-+.|-..+|+.  +|.+++++...+. .+ ..++..     .  ..+++    +.+++++|++.    .+|.+++|++
T Consensus        32 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~-~~-~~y~~~-----~--~~~lr----~~ia~~~~~~~----~~i~~t~G~~   94 (367)
T PRK02731         32 ADIIKLASNENPLGPSPKAIEAIRAAAD-EL-HRYPDG-----S--GFELK----AALAEKFGVDP----ERIILGNGSD   94 (367)
T ss_pred             CceEEecCCCCCCCCCHHHHHHHHHHHH-hh-cCCCCC-----c--HHHHH----HHHHHHhCcCH----HHEEEcCCHH
Confidence            3456666666775  8888888876533 21 122211     1  13343    57788999875    3688999965


Q ss_pred             -hHHHHHHhhCCc--------------------------------------cc--c---cccEEEEc-Ccc-cccccChH
Q psy10669        108 -ANFAVCEKALPT--------------------------------------NN--A---RFDFLSSG-TTC-YSRCLDYA  141 (337)
Q Consensus       108 -AN~~v~~aLl~~--------------------------------------~~--a---~pklII~~-~S~-~~~~~d~~  141 (337)
                       +...++.+++++                                      .+  +   ++|+|++. +++ .+...|.+
T Consensus        95 ~~l~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~  174 (367)
T PRK02731         95 EILELLARAYLGPGDEVIYSEHGFAVYPIAAQAVGAKPVEVPAKDYGHDLDAMLAAVTPRTRLVFIANPNNPTGTYLPAE  174 (367)
T ss_pred             HHHHHHHHHhcCCCCEEEEecCCHHHHHHHHHHcCCeEEEecccCCCCCHHHHHHHhCCCCcEEEEeCCCCCCCcCCCHH
Confidence             445555777543                                      00  1   26777765 322 35888999


Q ss_pred             HHHHHhhhc--CCeEEEeccccccccc----------------eeeeec-c----CC---chhhh--hHHHHHhhccCCC
Q psy10669        142 RFRQICDET--DSIMFADMSHISGLIA----------------GVKGVT-K----TG---EKILY--DYEEKINNAVFPS  193 (337)
Q Consensus       142 ~l~eia~~~--ga~l~vD~AH~~Gli~----------------g~~~T~-~----~G---g~i~~--~l~~~i~~~~~p~  193 (337)
                      ++.++++.+  |+++++|++|......                .+.+|. |    .|   |++++  ++.+.+.....|.
T Consensus       175 ~l~~l~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~~~~l~~~~~~~  254 (367)
T PRK02731        175 EVERFLAGVPPDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAPPEIIDALNRVRQPF  254 (367)
T ss_pred             HHHHHHHhCCCCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeCCHHHHHHHHHccCCC
Confidence            999998875  8999999998643321                122232 2    23   66665  5666666543332


Q ss_pred             CCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhh
Q psy10669        194 LQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEE  273 (337)
Q Consensus       194 ~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~  273 (337)
                         +.+.....++...+..  ....++.+++..++.+.+.+.|.+.|+.+..  .....+++.+.. +.+..++.+.|.+
T Consensus       255 ---~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~--~~g~~~~i~~~~-~~~~~~~~~~L~~  326 (367)
T PRK02731        255 ---NVNSLALAAAVAALDD--DAFVEKSRALNAEGMAWLTEFLAELGLEYIP--SVGNFILVDFDD-GKDAAEAYQALLK  326 (367)
T ss_pred             ---CCCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHCCCccCC--CCceEEEEECCC-CCCHHHHHHHHHH
Confidence               2233344333333321  1223566777788888899999988987764  456788888743 3477888889988


Q ss_pred             cCceeccCc------ccchhh
Q psy10669        274 IAIACNKNT------GISLAA  288 (337)
Q Consensus       274 ~gI~v~~~~------girig~  288 (337)
                      .||.+....      .|||+.
T Consensus       327 ~gI~v~~~~~~~~~~~iRis~  347 (367)
T PRK02731        327 RGVIVRPVAGYGLPNALRITI  347 (367)
T ss_pred             CCEEEEeCCCCCCCCeEEEec
Confidence            999997632      467653

>PRK05387 histidinol-phosphate aminotransferase; Provisional

Probab=98.95  E-value=1.8e-07  Score=90.12  Aligned_cols=228  Identities=20%  Similarity=0.192  Sum_probs=145.4

Q ss_pred             ccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-c
Q psy10669         30 INGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-S  106 (337)
Q Consensus        30 ~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t  106 (337)
                      +..|.|-..+|..  +|.+++++...+.... ..+|..    |   ..+    .|+.++++++.+.    -+|.+++| +
T Consensus        24 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~-~~y~~~----~---~~~----lr~aia~~~~~~~----~~I~it~G~~   87 (353)
T PRK05387         24 AKLIKLNTNENPYPPSPKVLEAIRAALGDDL-RLYPDP----N---ADA----LRQAIAAYYGLDP----EQVFVGNGSD   87 (353)
T ss_pred             cceeeccCCCCCCCCCHHHHHHHHHHhhhhh-hcCCCC----c---HHH----HHHHHHHHhCCCH----HHEEEcCCHH
Confidence            3568888888876  6889999876543211 112211    1   122    3568889999876    36888898 5


Q ss_pred             hhHHHHHHhhCCc---------------------------------------cccc-cc-EEEEcCcc-cccccChHHHH
Q psy10669        107 PANFAVCEKALPT---------------------------------------NNAR-FD-FLSSGTTC-YSRCLDYARFR  144 (337)
Q Consensus       107 ~AN~~v~~aLl~~---------------------------------------~~a~-pk-lII~~~S~-~~~~~d~~~l~  144 (337)
                      ++...++.+++++                                       .+.+ .+ ++++++.+ .+...+.+++.
T Consensus        88 ~al~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~v~~~~P~NPtG~~~~~~~~~  167 (353)
T PRK05387         88 EVLAHAFLAFFNHDRPLLFPDITYSFYPVYAGLYGIPYEEIPLDDDFSIDVEDYLRPNGGIIFPNPNAPTGIALPLAEIE  167 (353)
T ss_pred             HHHHHHHHHhcCCCCEEEEeCCCHHHHHHHHHHcCCEEEEeecCCCCCCCHHHHHhcCCEEEEeCCCCCCCCCCCHHHHH
Confidence            6777777888654                                       0001 34 44445544 46899999999


Q ss_pred             HHhhhc-CCeEEEeccccc--c-----ccc-----eeeeec-c----CC---chhhh--hHHHHHhhccCCCCCCCCcHH
Q psy10669        145 QICDET-DSIMFADMSHIS--G-----LIA-----GVKGVT-K----TG---EKILY--DYEEKINNAVFPSLQGGPHNH  201 (337)
Q Consensus       145 eia~~~-ga~l~vD~AH~~--G-----li~-----g~~~T~-~----~G---g~i~~--~l~~~i~~~~~p~~~g~~~~~  201 (337)
                      +|+++. ++++++|++|.-  |     ++.     .+++|. |    .|   |+++.  ++.+.+.....+....+.+.+
T Consensus       168 ~l~~~~~~~~livDe~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~~~~l~~~~~~~~~~~~~~~  247 (353)
T PRK05387        168 RILAANPDSVVVIDEAYVDFGGESAIPLIDRYPNLLVVQTFSKSRSLAGLRVGFAIGHPELIEALNRVKNSFNSYPLDRL  247 (353)
T ss_pred             HHHHhCCCcEEEEeCcccccCCcchHHHHhhCCCEEEEEehhHhhcchhhhceeeecCHHHHHHHHHhhccCCCCCcCHH
Confidence            999876 999999999841  0     110     123333 2    13   77665  566666543222122345556


Q ss_pred             HHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceec
Q psy10669        202 AIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACN  279 (337)
Q Consensus       202 ~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~  279 (337)
                      ..+++..++..  ...+++.++++.++.+++.+.|.+.|+++..  ..+..+++.+.  +.+..++.+.|.+.||.+.
T Consensus       248 ~q~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~--~~~~~~~~~~~--~~~~~~~~~~l~~~gi~v~  319 (353)
T PRK05387        248 AQAGAIAAIED--EAYFEETRAKVIATRERLVEELEALGFEVLP--SKANFVFARHP--SHDAAELAAKLRERGIIVR  319 (353)
T ss_pred             HHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCeECC--CcCcEEEEECC--CCCHHHHHHHHHHCCEEEE
Confidence            66555555532  1235677889999999999999999998754  34556666654  3467788888988899985

>PRK03321 putative aminotransferase; Provisional

Probab=98.92  E-value=2.4e-07  Score=89.46  Aligned_cols=231  Identities=13%  Similarity=0.142  Sum_probs=143.1

Q ss_pred             cceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCc-h
Q psy10669         31 NGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGS-P  107 (337)
Q Consensus        31 ~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt-~  107 (337)
                      .-|.|-..++..  +|.+.+++...+.. . ..++..    |   .+++    ++.+++++|+++    .+|.+++|+ +
T Consensus        23 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~-~-~~y~~~----g---~~~l----r~~ia~~~~~~~----~~I~~~~G~~~   85 (352)
T PRK03321         23 GAIKLSSNETPFGPLPSVRAAIARAAAG-V-NRYPDM----G---AVEL----RAALAEHLGVPP----EHVAVGCGSVA   85 (352)
T ss_pred             cceeccCCCCCCCCCHHHHHHHHHHHHh-c-CcCCCC----c---HHHH----HHHHHHHhCcCH----HHEEECCCHHH
Confidence            346666565544  77899998765432 1 223211    2   2333    367789999875    368889996 4


Q ss_pred             hHHHHHHhhCCc-----------------------------------------cc---ccccEEEEcCccc--ccccChH
Q psy10669        108 ANFAVCEKALPT-----------------------------------------NN---ARFDFLSSGTTCY--SRCLDYA  141 (337)
Q Consensus       108 AN~~v~~aLl~~-----------------------------------------~~---a~pklII~~~S~~--~~~~d~~  141 (337)
                      ++..++.+++++                                         +.   .+++++++....+  +...|.+
T Consensus        86 ~l~~~~~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~  165 (352)
T PRK03321         86 LCQQLVQATAGPGDEVIFAWRSFEAYPILVQVAGATPVQVPLTPDHTHDLDAMAAAITDRTRLIFVCNPNNPTGTVVTPA  165 (352)
T ss_pred             HHHHHHHHhcCCCCEEEeCCCCHHHHHHHHHHcCCEEEEccCCCCCCCCHHHHHHhhccCCCEEEEeCCCCCcCCCcCHH
Confidence            566666776543                                         00   1267777653333  5888999


Q ss_pred             HHHHHhhh--cCCeEEEeccccccccc----------------eeeeec-c-------CCchhhh--hHHHHHhhccCCC
Q psy10669        142 RFRQICDE--TDSIMFADMSHISGLIA----------------GVKGVT-K-------TGEKILY--DYEEKINNAVFPS  193 (337)
Q Consensus       142 ~l~eia~~--~ga~l~vD~AH~~Gli~----------------g~~~T~-~-------~Gg~i~~--~l~~~i~~~~~p~  193 (337)
                      ++.++|++  +|+++++|+++.--...                .+.+|. |       +-|++++  ++.+.+.....+.
T Consensus       166 ~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~~~~~~~~~~~~  245 (352)
T PRK03321        166 ELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGHPEVIAALRKVAVPF  245 (352)
T ss_pred             HHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCCHHHHHHHHHhcCCC
Confidence            99999987  59999999998521111                122232 2       1267765  5666666543222


Q ss_pred             CCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhh
Q psy10669        194 LQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEE  273 (337)
Q Consensus       194 ~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~  273 (337)
                         +.+.....+...++..  ...+.+..+++.++-+.+.+.|.+.|+.+..  .+...+++.++.   +..++.+.|.+
T Consensus       246 ---~~s~~~q~~a~~~l~~--~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~--~~g~~i~i~l~~---~~~~~~~~l~~  315 (352)
T PRK03321        246 ---SVNSLAQAAAIASLAA--EDELLERVDAVVAERDRVRAALRAAGWTVPP--SQANFVWLPLGE---RTADFAAAAAE  315 (352)
T ss_pred             ---CCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCccCC--CCCCEEEEeCCC---CHHHHHHHHHH
Confidence               3344444444444432  2345666677777778899999988887654  344557777743   46678888888


Q ss_pred             cCceeccCc--ccchhh
Q psy10669        274 IAIACNKNT--GISLAA  288 (337)
Q Consensus       274 ~gI~v~~~~--girig~  288 (337)
                      +||.+....  +|||+.
T Consensus       316 ~gI~v~~~~~~~iRi~~  332 (352)
T PRK03321        316 AGVVVRPFAGEGVRVTI  332 (352)
T ss_pred             CCEEEEccCCCcEEEee
Confidence            999998643  788874

>TIGR00707 argD acetylornithine and succinylornithine aminotransferases

Probab=98.92  E-value=1.3e-07  Score=91.91  Aligned_cols=227  Identities=16%  Similarity=0.112  Sum_probs=139.7

Q ss_pred             CCCC---CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHh
Q psy10669         39 ENFT---SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEK  115 (337)
Q Consensus        39 en~~---~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~a  115 (337)
                      +|++   +|.|.+++...+. ++.  ..+++ |. .....++|    ++++++||.+.     .+.+.||+.||..++.+
T Consensus        38 ~~~lG~~~p~v~~a~~~~~~-~~~--~~~~~-~~-~~~~~~l~----~~la~~~g~~~-----~~~~~sg~~a~~~a~~~  103 (379)
T TIGR00707        38 VNSLGHAHPKLVEALKEQLE-KLV--HVSNL-YY-TEPQEELA----EKLVEHSGADR-----VFFCNSGAEANEAALKL  103 (379)
T ss_pred             hccCCCCCHHHHHHHHHHHh-hcc--ccccc-cC-CHHHHHHH----HHHHhhCCCCE-----EEEeCCcHHHHHHHHHH
Confidence            6766   6999999987644 332  22222 32 23345555    58889999874     57778889999877774


Q ss_pred             hC---------Cc---------------------------------------------cc--c---cccEEEEcCccccc
Q psy10669        116 AL---------PT---------------------------------------------NN--A---RFDFLSSGTTCYSR  136 (337)
Q Consensus       116 Ll---------~~---------------------------------------------~~--a---~pklII~~~S~~~~  136 (337)
                      +.         ++                                             .+  .   ++++|++.+ ++++
T Consensus       104 ~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~p-~~~~  182 (379)
T TIGR00707       104 ARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDDETAAVIVEP-IQGE  182 (379)
T ss_pred             HHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhhhCeeEEEEEc-cccC
Confidence            41         11                                             00  0   157888864 3443


Q ss_pred             c----cC---hHHHHHHhhhcCCeEEEeccccccccc-e---------e---eeec-c------CCchhhh--hHHHHHh
Q psy10669        137 C----LD---YARFRQICDETDSIMFADMSHISGLIA-G---------V---KGVT-K------TGEKILY--DYEEKIN  187 (337)
Q Consensus       137 ~----~d---~~~l~eia~~~ga~l~vD~AH~~Gli~-g---------~---~~T~-~------~Gg~i~~--~l~~~i~  187 (337)
                      .    .+   +++|.++|+++|+++++|++|. |+.. |         +   ..|. |      ..|+++.  ++.+.+.
T Consensus       183 ~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~-~~~~~g~~~~~~~~~~~~d~~t~sK~~~~G~riG~~~~~~~~~~~~~  261 (379)
T TIGR00707       183 GGVNPASAEFLKALREICKDKDALLIFDEVQT-GIGRTGKFFAYEHYGIEPDIITLAKGLGGGVPIGATLAKEEVAEAFT  261 (379)
T ss_pred             CCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCccchhhhHHhcCCCCCEEEEcccccCCcccEEEEEcHHHHhhhc
Confidence            2    23   5678899999999999999996 3311 1         0   1121 2      1244443  5666665


Q ss_pred             hccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecC--CCCCeEEEEEecCCCcchH
Q psy10669        188 NAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTG--GTDVHLILIDLRKNKLTGS  265 (337)
Q Consensus       188 ~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~--~t~~h~v~V~~~~~~~~~~  265 (337)
                      .......+ +.++...++...++..+..   .++.+++.++.++++++|.+.+.+....  ...+.++++.+.+   +..
T Consensus       262 ~~~~~~~~-~~~~~~~~aa~aaL~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~~~~~~~---~~~  334 (379)
T TIGR00707       262 PGDHGSTF-GGNPLACAAALAVLEVIEK---ERLLENVKEKGDYFKERLEELGKNYPNKEVRGKGLMLGIELEA---PCK  334 (379)
T ss_pred             CCCCCCCC-CCCHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHHHhhCCCCccccCceEEEEEecC---cHH
Confidence            43222223 3566777777777766532   4678889999999999988754433110  1234456666653   357


Q ss_pred             HHHHHHhhcCceeccCc--ccchhh
Q psy10669        266 KVELVLEEIAIACNKNT--GISLAA  288 (337)
Q Consensus       266 ~~~~~L~~~gI~v~~~~--girig~  288 (337)
                      ++.+.|.+.||.+.+..  .+||+.
T Consensus       335 ~~~~~l~~~Gv~v~~~~~~~lRi~~  359 (379)
T TIGR00707       335 DIVKKALEKGLLVNCAGPKVLRFLP  359 (379)
T ss_pred             HHHHHHHHCCcEEeeCCCCEEEEEC
Confidence            78888998999998643  678764

Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)

>PRK04311 selenocysteine synthase; Provisional

Probab=98.91  E-value=1.7e-07  Score=94.28  Aligned_cols=219  Identities=13%  Similarity=0.083  Sum_probs=133.5

Q ss_pred             CCCCHHHHHHHhhhhhhccCCCCCCCcCcCc--cchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhC
Q psy10669         40 NFTSLAVLECLGSCLQNKYSEGLPGKRYYGG--NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL  117 (337)
Q Consensus        40 n~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G--~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl  117 (337)
                      ..+++.|.+++...+. .|.  +....+..|  ...++.+|    +++++++|+++     .+.++||+.|+..++.++.
T Consensus        96 s~l~~~v~eav~~~~~-~~~--~le~~l~~g~~g~r~~~~e----~~lA~l~Gae~-----a~vv~sgtaAl~l~l~~l~  163 (464)
T PRK04311         96 ALLSEAAIEAVTEAAR-GYS--NLEYDLATGKRGSRDRALA----ALLCALTGAED-----ALVVNNNAAAVLLALNALA  163 (464)
T ss_pred             CCCCHHHHHHHHHHHh-ccc--ccccchhhcccchHHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHhC
Confidence            4569999999986643 343  111111111  12234555    68899999986     6888999999887777763


Q ss_pred             Cc--------------------------------------------ccc---cccEEEEc-Ccccc-----cccChHHHH
Q psy10669        118 PT--------------------------------------------NNA---RFDFLSSG-TTCYS-----RCLDYARFR  144 (337)
Q Consensus       118 ~~--------------------------------------------~~a---~pklII~~-~S~~~-----~~~d~~~l~  144 (337)
                      +.                                            +.+   ++++|++. .|+|.     ...|+++|.
T Consensus       164 ~GdeVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~~~t~~~dle~aI~~~TklV~~vh~sN~~i~G~~~~~dl~eI~  243 (464)
T PRK04311        164 AGKEVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTTNRTHLRDYEQAINENTALLLKVHTSNYRIEGFTKEVSLAELA  243 (464)
T ss_pred             CCCEEEEcchhhhhcCcchhhHHHHHHCCcEEEEECCCCCCCHHHHHHhcCccCeEEEEEcCCCccccccCCcCCHHHHH
Confidence            21                                            111   25666655 66653     456999999


Q ss_pred             HHhhhcCCeEEEecccc-------ccccc-------------eeeeec------cCCchhhh--hHHHHHhhc--cCCCC
Q psy10669        145 QICDETDSIMFADMSHI-------SGLIA-------------GVKGVT------KTGEKILY--DYEEKINNA--VFPSL  194 (337)
Q Consensus       145 eia~~~ga~l~vD~AH~-------~Gli~-------------g~~~T~------~~Gg~i~~--~l~~~i~~~--~~p~~  194 (337)
                      ++|+++|+++++|.+++       .|+..             .+++++      |++|++++  ++.+++.+.  .+...
T Consensus       244 ~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp~~G~i~g~~~li~~l~~~~~~r~lr  323 (464)
T PRK04311        244 ALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGPQAGIIVGKKELIARLKKHPLKRALR  323 (464)
T ss_pred             HHHHHcCCeEEEECCCcccccchhccCCCCCchhhHHhcCCcEEEecCcccccCCceEEEEEcHHHHHHHhhchhHHHHh
Confidence            99999999999999632       11111             133443      45687765  566655521  11111


Q ss_pred             CCCCcHHHHHHHHHHHHHHhchhhHHH------------HHHHHHHHHHHHHHHHhC---CC--EEec------CCCC--
Q psy10669        195 QGGPHNHAIGAIATAMLQAQSDEFKSY------------QAQVKANASHLSDEMIKR---GY--HVVT------GGTD--  249 (337)
Q Consensus       195 ~g~~~~~~iaala~a~~e~~~~~~~~y------------~~~v~~na~~l~~~L~~~---G~--~v~~------~~t~--  249 (337)
                         ..--.++++...+.....+ ++.+            .++..+||+.+++.|...   ++  .|..      ||+.  
T Consensus       324 ---~dk~~l~~l~~~l~~~~~~-~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~gggs~p~  399 (464)
T PRK04311        324 ---VDKLTLAALEATLRLYLDP-EKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGAAFAVEVVPSFSQVGGGSLPV  399 (464)
T ss_pred             ---cchHHHHHHHHHHHHHhCh-hhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCeeEEEEEccCccCCCCCcC
Confidence               1124566666666544332 1222            378888999999999875   33  3442      3333  


Q ss_pred             --CeEEEEEecCCCcchHHHHHHHhhc
Q psy10669        250 --VHLILIDLRKNKLTGSKVELVLEEI  274 (337)
Q Consensus       250 --~h~v~V~~~~~~~~~~~~~~~L~~~  274 (337)
                        =+-..|.+...+.+..++.+.|.+.
T Consensus       400 ~~~~~~~v~~~~~~~~~~~l~~~lr~~  426 (464)
T PRK04311        400 DRLPSAAVTLTPKDRSLEALAARLRLL  426 (464)
T ss_pred             CCCCeEEEEEeCCCCCHHHHHHHHhcC
Confidence              2445566666677889999999874

>PRK00950 histidinol-phosphate aminotransferase; Validated

Probab=98.91  E-value=2.9e-07  Score=88.97  Aligned_cols=220  Identities=15%  Similarity=0.119  Sum_probs=128.4

Q ss_pred             cceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeec-CCCc-
Q psy10669         31 NGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQP-YSGS-  106 (337)
Q Consensus        31 ~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~-~Sgt-  106 (337)
                      .-|+|-..+|+.  +|.+.+++...+. .+ .+++..       ...++    ++.+++++|+++    .++.+ ++|+ 
T Consensus        35 ~~i~l~~~~~~~~~~~~~~~~~~~~~~-~~-~~y~~~-------~~~~l----r~~ia~~~~~~~----~~i~~~~~Ga~   97 (361)
T PRK00950         35 SIIKLGSNENPLGPSPKAVEAIEKELS-KI-HRYPEP-------DAPEL----REALSKYTGVPV----ENIIVGGDGMD   97 (361)
T ss_pred             ceEEccCCCCCCCCCHHHHHHHHHHHH-hh-cCCCCC-------CHHHH----HHHHHHHhCCCH----HHEEEeCCCHH
Confidence            447777777876  6888888865433 21 122211       11334    467788999876    35777 7885 


Q ss_pred             hhHHHHHHhhCCc---------------------------------------cc--c---cccEEEEc-Ccc-cccccCh
Q psy10669        107 PANFAVCEKALPT---------------------------------------NN--A---RFDFLSSG-TTC-YSRCLDY  140 (337)
Q Consensus       107 ~AN~~v~~aLl~~---------------------------------------~~--a---~pklII~~-~S~-~~~~~d~  140 (337)
                      +++..++.+++++                                       .+  +   ++++|++. +++ .+...|.
T Consensus        98 ~~i~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~p~nptG~~~~~  177 (361)
T PRK00950         98 EVIDTLMRTFIDPGDEVIIPTPTFSYYEISAKAHGAKPVYAKREEDFSLDVDSVLNAITEKTKVIFLCTPNNPTGNLIPE  177 (361)
T ss_pred             HHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecCCCCCcCHHHHHHHhccCCCEEEEeCCCCCCCCCcCH
Confidence            5565666776543                                       01  0   26777764 333 3588899


Q ss_pred             HHHHHHhhhcCCeEEEeccccccccc-------------eeeeec-c----CC---chhhh--hHHHHHhhccCCCCCCC
Q psy10669        141 ARFRQICDETDSIMFADMSHISGLIA-------------GVKGVT-K----TG---EKILY--DYEEKINNAVFPSLQGG  197 (337)
Q Consensus       141 ~~l~eia~~~ga~l~vD~AH~~Gli~-------------g~~~T~-~----~G---g~i~~--~l~~~i~~~~~p~~~g~  197 (337)
                      +++.++|+++|+++++|++|.- +..             .+.+|. |    .|   |++++  ++.+.+.....+.   +
T Consensus       178 ~~l~~l~~~~~~~li~De~y~~-~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~~---~  253 (361)
T PRK00950        178 EDIRKILESTDALVFVDEAYVE-FAEYDYTPLALEYDNLIIGRTFSKVFGLAGLRIGYGFVPEWLIDYYMRAKTPF---S  253 (361)
T ss_pred             HHHHHHHHHCCcEEEEECchhh-hCccchHHHHHhcCCEEEEEeehHhhcCchhhcchhcCCHHHHHHHHHhcCCC---C
Confidence            9999999999999999999952 222             122332 2    23   66665  4666555443332   1


Q ss_pred             CcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCce
Q psy10669        198 PHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIA  277 (337)
Q Consensus       198 ~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~  277 (337)
                      .+.+..+++..++..  ....++.++++.++.++|.+.|   ++++..  +.+..+++++  .+.+..++.+.|.+.||.
T Consensus       254 ~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~r~~l~~~l---~~~~~~--~~~~~i~~~~--~~~~~~~~~~~l~~~gv~  324 (361)
T PRK00950        254 LTRLSQAAAIAALSD--KEYIEKSIEHGIKSREYLYNEL---PFKVYP--SEANFVLVDV--TPMTAKEFCEELLKRGVI  324 (361)
T ss_pred             CCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHhhc---CeeECC--CcceEEEEEC--CCCCHHHHHHHHHHCCEE
Confidence            333444443333321  1112333344444444444444   355543  4556777877  345788888899888999


Q ss_pred             ecc
Q psy10669        278 CNK  280 (337)
Q Consensus       278 v~~  280 (337)
                      +.+
T Consensus       325 v~~  327 (361)
T PRK00950        325 VRD  327 (361)
T ss_pred             Eee
Confidence            875

>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase

Probab=98.91  E-value=3e-08  Score=97.34  Aligned_cols=186  Identities=13%  Similarity=0.117  Sum_probs=116.7

Q ss_pred             eeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHH
Q psy10669         35 LIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCE  114 (337)
Q Consensus        35 l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~  114 (337)
                      +..|..|..+...++.... ..+. .++..+|+  ++...+++|    +++++++|+++     .+.+.||+.|+.+++.
T Consensus        21 i~~~~~~~~~~~~~~~~~~-~~~~-~~~~y~r~--~~p~~~~le----~~la~l~g~~~-----~~~~~sG~~Ai~~al~   87 (380)
T TIGR01325        21 LFLTSSFVYDSAAHAADRF-AGEI-PGFVYSRY--ANPTVAAFE----ERIAALEGAER-----AVATATGMSAIQAALM   87 (380)
T ss_pred             eeCCcceecCCHHHHHHhh-cccc-CCcceecC--CCchHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHH
Confidence            4445555544444443321 1121 23334444  345567787    58889999975     5778999999999888


Q ss_pred             hhCCc----------------------------------------ccc---cccEEEEc-Ccc-cccccChHHHHHHhhh
Q psy10669        115 KALPT----------------------------------------NNA---RFDFLSSG-TTC-YSRCLDYARFRQICDE  149 (337)
Q Consensus       115 aLl~~----------------------------------------~~a---~pklII~~-~S~-~~~~~d~~~l~eia~~  149 (337)
                      +++++                                        +.+   ++|+|++. .++ .+...|+++|.++|++
T Consensus        88 al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~~~d~~~l~~~i~~~tklV~le~p~np~g~~~dl~~I~~la~~  167 (380)
T TIGR01325        88 TLLQAGDHVVASRSLFGSTVGFISEILPRFGIEVSFVDPTDLNAWEAAVKPNTKLVFVETPSNPLGELVDIAALAELAHA  167 (380)
T ss_pred             HHhCCCCEEEEecCCcchHHHHHHHHHHHhCCEEEEECCCCHHHHHHhcCCCceEEEEECCCCCCCeeeCHHHHHHHHHH
Confidence            88654                                        111   26888876 333 3578899999999999


Q ss_pred             cCCeEEEeccccccccc--------eee-eecc--------CCchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHH
Q psy10669        150 TDSIMFADMSHISGLIA--------GVK-GVTK--------TGEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAM  210 (337)
Q Consensus       150 ~ga~l~vD~AH~~Gli~--------g~~-~T~~--------~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~  210 (337)
                      +|++++||++|..++..        .++ +.+|        .||++++  ++.+.+.....+  .|+...+..|.+  ++
T Consensus       168 ~gi~livD~a~~~~~~~~pl~~g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~~~l~~~~~~--~g~~~~p~~a~~--~l  243 (380)
T TIGR01325       168 IGALLVVDNVFATPVLQQPLKLGADVVVYSATKHIDGQGRVMGGVIAGSEELMAEVAVYLRH--TGPAMSPFNAWV--LL  243 (380)
T ss_pred             cCCEEEEECCCcccccCCchhhCCCEEEeeccceecCCCCeEEEEEEeCHHHHHHHHHHHHh--hCCCCCHHHHHH--HH
Confidence            99999999999876543        122 2223        1466665  455555443222  233333333322  22


Q ss_pred             HHHhchhhHHHHHHHHHHHHHHHHHHHhC
Q psy10669        211 LQAQSDEFKSYQAQVKANASHLSDEMIKR  239 (337)
Q Consensus       211 ~e~~~~~~~~y~~~v~~na~~l~~~L~~~  239 (337)
                      ..+  ...+.+.++..+|++.+++.|.+.
T Consensus       244 ~~l--~tl~~r~~~~~~~a~~la~~L~~~  270 (380)
T TIGR01325       244 KGL--ETLSLRMQKQFDSALAIAEWLQAQ  270 (380)
T ss_pred             hcc--CcHHHHHHHHHHHHHHHHHHHHcC
Confidence            233  245678899999999999999985

This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.

>PLN02414 glycine dehydrogenase (decarboxylating)

Probab=98.89  E-value=6.5e-08  Score=104.48  Aligned_cols=201  Identities=14%  Similarity=0.116  Sum_probs=124.7

Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCcceeecCCCch---hHHHHHHhhCCc--------------------------------
Q psy10669         75 DEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSP---ANFAVCEKALPT--------------------------------  119 (337)
Q Consensus        75 ~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~---AN~~v~~aLl~~--------------------------------  119 (337)
                      .++...+++.++++||++.    +.+++.+|.+   |++.++.+++++                                
T Consensus       567 ~~~~~~~r~~la~i~g~~~----v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~~~G~~vv~  642 (993)
T PLN02414        567 QEMFEDLGDLLCEITGFDS----FSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMCGMKIVV  642 (993)
T ss_pred             HHHHHHHHHHHHHHhCCCe----EEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHHHCCCEEEE
Confidence            3556678899999999976    6677777743   666667777522                                


Q ss_pred             ---------------c-cc----cccEEEEc-Ccccc-cccChHHHHHHhhhcCCeEEEeccccccccc----------e
Q psy10669        120 ---------------N-NA----RFDFLSSG-TTCYS-RCLDYARFRQICDETDSIMFADMSHISGLIA----------G  167 (337)
Q Consensus       120 ---------------~-~a----~pklII~~-~S~~~-~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~----------g  167 (337)
                                     + +.    ++++|+++ +|+++ ...|+++|.++|+++|++++||.||..|+++          .
T Consensus       643 v~~d~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~~l~~p~~~GaD~  722 (993)
T PLN02414        643 VGTDAKGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQVGLTSPGFIGADV  722 (993)
T ss_pred             eccCCCCCcCHHHHHHHHhccCCCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhccCcCCccccCCCE
Confidence                           0 00    13566666 66665 7778999999999999999999999988855          1


Q ss_pred             eeeeccC--------C----chhhh--hHHHHHhh------ccC-----CCCCCCCcH---H--HHHHHHHHHHHHhc-h
Q psy10669        168 VKGVTKT--------G----EKILY--DYEEKINN------AVF-----PSLQGGPHN---H--AIGAIATAMLQAQS-D  216 (337)
Q Consensus       168 ~~~T~~~--------G----g~i~~--~l~~~i~~------~~~-----p~~~g~~~~---~--~iaala~a~~e~~~-~  216 (337)
                      +++++||        |    |++..  .+...+-.      .-|     +.-.|+.+.   +  .++-.+.+...++- .
T Consensus       723 ~~~s~HK~f~~P~G~GGPg~G~l~~~~~L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~~g~al~l~~A~~yi~~lG~~  802 (993)
T PLN02414        723 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPRPEKTQPLGTISAAPWGSALILPISYTYIAMMGSE  802 (993)
T ss_pred             EEecCCccCCcCcccCCCCeeeEEEchhhcccCCCCccccCCCcccccCCCCcCCccchhhhhHHHHHHHHHHHHHHCHh
Confidence            3343322        1    44432  23332210      000     000233221   1  22222233323322 3


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhCCCEEecCC---CCCeEEEEEecC----CCcchHHHHHHHhhcCceecc
Q psy10669        217 EFKSYQAQVKANASHLSDEMIKRGYHVVTGG---TDVHLILIDLRK----NKLTGSKVELVLEEIAIACNK  280 (337)
Q Consensus       217 ~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~---t~~h~v~V~~~~----~~~~~~~~~~~L~~~gI~v~~  280 (337)
                      ..++-.++.+.|++|++++|.+ ++.+...+   .--|-..++++.    .+.+..++.++|.++||....
T Consensus       803 Gl~~~a~~a~~nAnYl~~rL~~-~~~~~~~~~~~~~~hEfv~~~~~l~~~~g~~~~di~krL~d~Gihapt  872 (993)
T PLN02414        803 GLTDASKIAILNANYMAKRLEG-HYPVLFRGKNGTCAHEFIIDLRPFKNTAGIEPEDVAKRLMDYGFHAPT  872 (993)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHh-hCCccccCCCCCeeeeEEEeccccccccCCCHHHHHHHHHHcCcEEee
Confidence            3456688999999999999987 67665422   223567777762    246678899999999997653

>PRK03715 argD acetylornithine transaminase protein; Provisional

Probab=98.88  E-value=2.7e-07  Score=91.04  Aligned_cols=154  Identities=10%  Similarity=0.097  Sum_probs=90.4

Q ss_pred             cEEEEcCcccccccC-------hHHHHHHhhhcCCeEEEeccccccccc--e---------e---eee-cc--CCch---
Q psy10669        125 DFLSSGTTCYSRCLD-------YARFRQICDETDSIMFADMSHISGLIA--G---------V---KGV-TK--TGEK---  177 (337)
Q Consensus       125 klII~~~S~~~~~~d-------~~~l~eia~~~ga~l~vD~AH~~Gli~--g---------~---~~T-~~--~Gg~---  177 (337)
                      .+||+. ..+++.++       +++++++|+++|++|++|+.|+ |+ +  |         +   ..| +|  .||+   
T Consensus       181 aavi~E-pv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~t-G~-GRtG~~~a~~~~gv~PDi~t~gK~lg~G~p~~  257 (395)
T PRK03715        181 VAVMLE-PVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQT-GC-GRTGTLFAYELSGIEPDIMTLGKGIGGGVPLA  257 (395)
T ss_pred             eEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CC-CCCcchhhHhhcCCCCceeeehhhhhCCcceE
Confidence            456665 36655333       6788899999999999999998 64 3  1         1   112 12  1332   


Q ss_pred             --hhh-hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC----CCEEecCCCCC
Q psy10669        178 --ILY-DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR----GYHVVTGGTDV  250 (337)
Q Consensus       178 --i~~-~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~----G~~v~~~~t~~  250 (337)
                        +.. ++.. ..+.....+++ .|+...|+...++..+.+   ++..+++.++.++|.++|++.    ++.-+.  ...
T Consensus       258 av~~~~~i~~-~~~~~~~~T~~-g~pl~~aaala~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~i~~vr--G~G  330 (395)
T PRK03715        258 ALLAKAEVAV-FEAGDQGGTYN-GNPLMTAVGVAVISQLLA---PGFLEGVRARGEYLKEKLLELSEERGLEGER--GEG  330 (395)
T ss_pred             EEEEcccccc-ccCCCcCCCCC-CCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHhhcCCcCeEE--cce
Confidence              222 3421 11111122232 455555555555655532   467899999999999999863    543232  467


Q ss_pred             eEEEEEecCCCcchHHHHHHHhhc---CceeccCc--ccchhhhh
Q psy10669        251 HLILIDLRKNKLTGSKVELVLEEI---AIACNKNT--GISLAAEI  290 (337)
Q Consensus       251 h~v~V~~~~~~~~~~~~~~~L~~~---gI~v~~~~--girig~~~  290 (337)
                      +++.|.+.+.  .+..+.+.+.+.   ||.++...  .|||..+.
T Consensus       331 lm~~i~l~~~--~~~~~~~~~~~~~~~Gi~~~~~~~~~lR~~p~l  373 (395)
T PRK03715        331 LLRALLLGKD--IGPQIVEKARDMQPDGLLLNAPRPNLLRFMPAL  373 (395)
T ss_pred             eEEEEEecCc--hHHHHHHHHHhccCCCEEEeecCCCEEEEeCCc
Confidence            8888988653  223333444444   99987543  67776543

>PRK01278 argD acetylornithine transaminase protein; Provisional

Probab=98.88  E-value=5.6e-07  Score=88.23  Aligned_cols=224  Identities=13%  Similarity=0.090  Sum_probs=128.5

Q ss_pred             CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhh------
Q psy10669         43 SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKA------  116 (337)
Q Consensus        43 ~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aL------  116 (337)
                      +|.|.+|+...+.+-+..   +. .+ .+....+++    ++++++++.+.     .+.+.||+.||..++.++      
T Consensus        49 ~p~v~~a~~~~~~~~~~~---~~-~~-~~~~~~~la----~~l~~~~~~~~-----v~~~~sGseA~~~al~~ar~~~~~  114 (389)
T PRK01278         49 HPHLVEALKEQAEKLWHV---SN-LY-RIPEQERLA----ERLVENSFADK-----VFFTNSGAEAVECAIKTARRYHYG  114 (389)
T ss_pred             CHHHHHHHHHHHHhcCcc---cc-cc-CChHHHHHH----HHHHhhCCCCE-----EEEcCCcHHHHHHHHHHHHHHHHh
Confidence            999999998775532211   11 11 223333444    57777776543     466688899998887765      


Q ss_pred             ---CCc------------------------------------------------cc---ccccEEEEcCccccccc----
Q psy10669        117 ---LPT------------------------------------------------NN---ARFDFLSSGTTCYSRCL----  138 (337)
Q Consensus       117 ---l~~------------------------------------------------~~---a~pklII~~~S~~~~~~----  138 (337)
                         .++                                                +.   .++++||+.+ +++..+    
T Consensus       115 ~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~avivep-~~~~~G~~~~  193 (389)
T PRK01278        115 KGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAITPNTAAILIEP-IQGEGGIRPA  193 (389)
T ss_pred             cCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhCCCeEEEEEec-ccCCCCCcCC
Confidence               111                                                00   0146788874 454433    


Q ss_pred             ---ChHHHHHHhhhcCCeEEEecccccccc--c--------ee---eeec-c-------CCchhhh-hHHHHHhhccCCC
Q psy10669        139 ---DYARFRQICDETDSIMFADMSHISGLI--A--------GV---KGVT-K-------TGEKILY-DYEEKINNAVFPS  193 (337)
Q Consensus       139 ---d~~~l~eia~~~ga~l~vD~AH~~Gli--~--------g~---~~T~-~-------~Gg~i~~-~l~~~i~~~~~p~  193 (337)
                         ++++|+++|+++|++|++|+.|. |+-  +        ++   ..|. |       -|+++.. ++.+.+.......
T Consensus       194 ~~~~l~~l~~l~~~~g~~lI~DEv~~-g~g~~g~~~~~~~~~~~pdi~t~sK~l~~G~~ig~~~~~~~~~~~~~~~~~~~  272 (389)
T PRK01278        194 PDEFLKGLRQLCDENGLLLIFDEVQC-GMGRTGKLFAHEWAGVTPDIMAVAKGIGGGFPLGACLATEEAAKGMTPGTHGS  272 (389)
T ss_pred             CHHHHHHHHHHHHHcCCEEEEecccc-CCCcCCcceeecccCCCCCEEEEehhccCCcceEEEEEcHHHHhccCCCCCCC
Confidence               67789999999999999999997 431  1        10   1111 2       1222222 4555555433333


Q ss_pred             CCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCE-EecC-CCCCeEEEEEecCCCcchHHHHH
Q psy10669        194 LQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYH-VVTG-GTDVHLILIDLRKNKLTGSKVEL  269 (337)
Q Consensus       194 ~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~-v~~~-~t~~h~v~V~~~~~~~~~~~~~~  269 (337)
                      ++ +.++...++...++..+.+   .++.+++.++.++++++|++.  .+. +... ....-++.+.+..   +..++.+
T Consensus       273 t~-~~~~~~~aaa~a~l~~l~~---~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~v~g~G~~~~i~~~~---~~~~~~~  345 (389)
T PRK01278        273 TY-GGNPLAMAVGNAVLDVILA---PGFLDNVQRMGLYLKQKLEGLVDRFPDVIEEVRGKGLLLGLKCVV---PNRDLVQ  345 (389)
T ss_pred             CC-CccHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHHHhhCCCceeeEecccEEEEEEEec---CHHHHHH
Confidence            34 3566666666666766532   356778888888888888762  121 2210 0122333444432   4566777


Q ss_pred             HHhhcCceeccCc--ccchhhh
Q psy10669        270 VLEEIAIACNKNT--GISLAAE  289 (337)
Q Consensus       270 ~L~~~gI~v~~~~--girig~~  289 (337)
                      .|.+.||.+.+..  .|||+.+
T Consensus       346 ~l~~~GV~~~p~~~~~lR~~p~  367 (389)
T PRK01278        346 ALRDEGLLTVGAGDNVVRLLPP  367 (389)
T ss_pred             HHHHCCeEEeecCCCEEEEeCC
Confidence            7777799987543  6787754

>TIGR00474 selA seryl-tRNA(sec) selenium transferase

Probab=98.88  E-value=3e-07  Score=92.21  Aligned_cols=218  Identities=16%  Similarity=0.187  Sum_probs=130.5

Q ss_pred             CCCHHHHHHHhhhhhhccCCCCCCCcCcCc--cchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCC
Q psy10669         41 FTSLAVLECLGSCLQNKYSEGLPGKRYYGG--NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALP  118 (337)
Q Consensus        41 ~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G--~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~  118 (337)
                      .+|+.|.+++...+. .|+  +....+-.|  ...++.+|    +++++++|+++     ++.++||+.|+..++.++.+
T Consensus        92 ~l~~~vieAv~~~~~-~y~--~l~~~l~~g~~g~r~~~le----~~lA~l~gae~-----alvv~sg~aAi~l~l~~l~~  159 (454)
T TIGR00474        92 PLAEEAIEAVTDAAR-GYS--NLEYDLETGKRGSRYSHVE----GLLCELTGAED-----ALVVNNNAAAVLLALNTLAK  159 (454)
T ss_pred             CCCHHHHHHHHHHHh-ccc--chhccccccccchHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHhCC
Confidence            459999999986644 443  211111011  12245555    68899999986     57789999998888777632


Q ss_pred             c--------------------------------------------ccc---cccEEEE-cCccccc-----ccChHHHHH
Q psy10669        119 T--------------------------------------------NNA---RFDFLSS-GTTCYSR-----CLDYARFRQ  145 (337)
Q Consensus       119 ~--------------------------------------------~~a---~pklII~-~~S~~~~-----~~d~~~l~e  145 (337)
                      .                                            +.+   ++++|++ ..|+|++     ..|+++|.+
T Consensus       160 GdeVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~~~~~l~dle~aI~~~T~lv~~~h~sN~~~~G~~~~~dl~~I~~  239 (454)
T TIGR00474       160 GKEVIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGTTNRTHLKDYEDAITENTALLLKVHTSNYRIVGFTEEVSIAELVA  239 (454)
T ss_pred             cCEEEECCChhhhhcchhhHHHHHHHcCCEEEEeCCCCCCCHHHHHHhcCcCCEEEEEEccCcccccCCCCCCCHHHHHH
Confidence            1                                            111   1566554 4677765     569999999


Q ss_pred             HhhhcCCeEEEecccccccc---------c-------------eeeeec------cCCchhhh--hHHHHHhhccCCCCC
Q psy10669        146 ICDETDSIMFADMSHISGLI---------A-------------GVKGVT------KTGEKILY--DYEEKINNAVFPSLQ  195 (337)
Q Consensus       146 ia~~~ga~l~vD~AH~~Gli---------~-------------g~~~T~------~~Gg~i~~--~l~~~i~~~~~p~~~  195 (337)
                      +|+++|++++||.+  +|++         .             .+++++      |.||++++  ++.+++.+.  |...
T Consensus       240 la~~~g~~vivD~~--sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp~~G~i~g~~~~i~~l~~~--~l~r  315 (454)
T TIGR00474       240 LGREHGLPVMEDLG--SGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGPQAGIIVGKKELIERLKKN--PLTR  315 (454)
T ss_pred             HHHHcCCeEEEECC--CcccccchhccCCCCcccccHhHcCCCEEEecCccccCCCeEEEEEECHHHHHhhhhc--hhHH
Confidence            99999999999975  3332         1             133332      45787765  454444321  1100


Q ss_pred             -CCCcHHHHHHHHHHHHHHhchhhHHH------------HHHHHHHHHHHHHHHHh---CCCE--Eec------CCC---
Q psy10669        196 -GGPHNHAIGAIATAMLQAQSDEFKSY------------QAQVKANASHLSDEMIK---RGYH--VVT------GGT---  248 (337)
Q Consensus       196 -g~~~~~~iaala~a~~e~~~~~~~~y------------~~~v~~na~~l~~~L~~---~G~~--v~~------~~t---  248 (337)
                       =-..--.+|++...+...+.+. ..+            .++..+||+.+++.|.+   .|+.  |..      ||+   
T Consensus       316 ~lr~~k~~la~l~~~l~~~~~~~-~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~ggg~~p~  394 (454)
T TIGR00474       316 ALRVDKLTLAALEATLRLYLDPE-KALEKIPTLRMLTQSPEELRARAERLAKRLKAALGPGFELEIVPGLSQVGGGSLPD  394 (454)
T ss_pred             HHhhChHHHHHHHHHHHHHhCch-hhhhhchHHHHhccCHHHHHHHHHHHHHHHHhhccCCceEEEEEcCCcccCCCCcC
Confidence             0011124455555555544332 222            34788899999999987   4443  332      222   


Q ss_pred             -CCeEEEEEecCCCcchHHHHHHHhhcC
Q psy10669        249 -DVHLILIDLRKNKLTGSKVELVLEEIA  275 (337)
Q Consensus       249 -~~h~v~V~~~~~~~~~~~~~~~L~~~g  275 (337)
                       .=+-..|.+...+.+..++.++|.+..
T Consensus       395 ~~l~~~~v~~~~~~~~~~~l~~~lr~~~  422 (454)
T TIGR00474       395 ERLPSYAVTLTPDGLSAEKLEARLRELP  422 (454)
T ss_pred             CCCCeEEEEEecCCCCHHHHHHHHhcCC
Confidence             123445556666778889999999754

In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.

>PRK08574 cystathionine gamma-synthase; Provisional

Probab=98.87  E-value=3.6e-08  Score=97.02  Aligned_cols=155  Identities=15%  Similarity=0.098  Sum_probs=104.3

Q ss_pred             ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669         70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------  119 (337)
Q Consensus        70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------  119 (337)
                      ++....++|    +++++++|.++     .+.++||+.|+..++.+++++                              
T Consensus        51 ~np~~~~lE----~~lA~l~g~~~-----~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~  121 (385)
T PRK08574         51 ENPTLRPLE----EALAKLEGGVD-----ALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVL  121 (385)
T ss_pred             CCccHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHhhccCcEEEE
Confidence            456678888    58899999875     588899999999888888754                              


Q ss_pred             ----------cc-c-cccEEEEcCccc--ccccChHHHHHHhhhcCCeEEEeccccccccc-----e---ee-eecc---
Q psy10669        120 ----------NN-A-RFDFLSSGTTCY--SRCLDYARFRQICDETDSIMFADMSHISGLIA-----G---VK-GVTK---  173 (337)
Q Consensus       120 ----------~~-a-~pklII~~~S~~--~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----g---~~-~T~~---  173 (337)
                                .+ . ++|+|++....+  +...|+++|.++|+++|+++++|++|..|+..     |   ++ |.+|   
T Consensus       122 ~~~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD~t~a~~~~~~~l~~GaDivv~S~sK~l~  201 (385)
T PRK08574        122 AYPSTEDIIEAIKEGRTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVDNTFATPLLYRPLRHGADFVVHSLTKYIA  201 (385)
T ss_pred             ECCCHHHHHHhcCccCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccCChhhhCCcEEEeeCceeec
Confidence                      00 1 257888753233  36789999999999999999999999988753     1   22 2222   


Q ss_pred             -----CCc-hhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC
Q psy10669        174 -----TGE-KILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR  239 (337)
Q Consensus       174 -----~Gg-~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~  239 (337)
                           .|| ++..  ++.+++.....  ..|+...+..|+++.  ..+  .....+.++..+|++++++.|.+.
T Consensus       202 g~~d~~gG~vi~~~~~~~~~~~~~~~--~~g~~~~p~~a~l~l--~~l--~tL~~R~~~~~~na~~la~~L~~~  269 (385)
T PRK08574        202 GHNDVVGGVAVAWSGEFLEELWEWRR--RLGTIMQPFEAYLVL--RGL--KTLEVRFERQCRNAMAIAEFLSEH  269 (385)
T ss_pred             CCCCceeEEEEECcHHHHHHHHHHHH--hcCCCCCHHHHHHHH--ccc--CcHHHHHHHHHHHHHHHHHHHHcC
Confidence                 256 4443  45554442211  133444444444333  233  235678888899999999999874

>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]

Probab=98.87  E-value=2.9e-07  Score=92.43  Aligned_cols=264  Identities=17%  Similarity=0.136  Sum_probs=159.2

Q ss_pred             hhhhcHHHHHHHH-HHHhh--cccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHh
Q psy10669         11 LAQTDPELYSLIK-KEKHR--QINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLK   87 (337)
Q Consensus        11 l~~~d~~~~~~~~-~e~~r--q~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~   87 (337)
                      .....+++..++. .+...  +........++-++++.+.+++.+.+...  .+.++.  |.   ...++|..+-.-+++
T Consensus        40 ~~~v~~~l~~~~~~d~~~~~~~p~~~~~~~~~~~~~~~a~~~~~~~~~~n--l~d~~~--~p---~a~~~E~~~v~~l~~  112 (460)
T COG0076          40 LEEVLDELAELLIKDELYLDGHPRANLAGFCPTRVPPVAAELLVSALNKN--LGDPDE--SP---AAAELEERVVNMLSD  112 (460)
T ss_pred             hhhHHHHHHHHhhcccccccCCcceEEEccCCCCCHHHHHHHHHHHHhhc--CCCccc--Ch---hHHHHHHHHHHHHHH
Confidence            4555666666633 22222  22334455566666777778777654432  233222  11   345788888889999


Q ss_pred             hcCCCCCCCcceeecCCCchhHHHHHHhh---------C-------Cc--------------------------------
Q psy10669         88 AFNLDPEQWGCNVQPYSGSPANFAVCEKA---------L-------PT--------------------------------  119 (337)
Q Consensus        88 lfg~~~~~~~~~v~~~Sgt~AN~~v~~aL---------l-------~~--------------------------------  119 (337)
                      ++|++..-+  -+...+||.||+..+.+.         .       .|                                
T Consensus       113 l~~~~~~~~--G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~~  190 (460)
T COG0076         113 LLGAPEEAS--GTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPTD  190 (460)
T ss_pred             HhCCCCCCc--eEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCCeEEecCcchhHHHHHHHHhCCCceeEEeccCc
Confidence            999964322  244445599987444443         0       01                                


Q ss_pred             ------ccc----c---ccEEEE--cCcccccccChHHHHHHhhhcCCeEEEeccccccccc-------------ee---
Q psy10669        120 ------NNA----R---FDFLSS--GTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA-------------GV---  168 (337)
Q Consensus       120 ------~~a----~---pklII~--~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-------------g~---  168 (337)
                            .+.    +   ...||.  |.+.++..-|+++|.+||+++|++++||+|-+..++.             ++   
T Consensus       191 ~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~vdSI  270 (460)
T COG0076         191 YRIDVDALEEAIDENTIGGVVVGTAGTTDTGSIDDIEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSI  270 (460)
T ss_pred             cccCHHHHHHHHHhhccCceEEEEecCCCCCccCCHHHHHHHHHHcCCcEEEEccccceeecccCccchhhcCCCCceEE
Confidence                  000    1   212443  3445678899999999999999999999995544443             11   


Q ss_pred             -eeecc-----C-Cchhhh-h---HHHHHh--hccCCC-------CCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHH
Q psy10669        169 -KGVTK-----T-GEKILY-D---YEEKIN--NAVFPS-------LQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKAN  228 (337)
Q Consensus       169 -~~T~~-----~-Gg~i~~-~---l~~~i~--~~~~p~-------~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~n  228 (337)
                       +..||     . .|.++. |   +.+.+.  ....|+       +.|+...-..++.-..++.+-.++|++..++.+++
T Consensus       271 t~d~HK~g~aP~~~G~il~rd~e~l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~  350 (460)
T COG0076         271 TVDGHKYGLAPIGCGVVLFRDEEALRRILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLEL  350 (460)
T ss_pred             EECcccccCCCCCceEEEEECHHHhhhhhhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHH
Confidence             22333     1 355543 2   433222  111221       12444444677777778887668899999999999


Q ss_pred             HHHHHHHHHhCC-CEEecCCCCCeEEEEEecCCCc-c-hHHHHHHHhhcCceeccCc---ccch
Q psy10669        229 ASHLSDEMIKRG-YHVVTGGTDVHLILIDLRKNKL-T-GSKVELVLEEIAIACNKNT---GISL  286 (337)
Q Consensus       229 a~~l~~~L~~~G-~~v~~~~t~~h~v~V~~~~~~~-~-~~~~~~~L~~~gI~v~~~~---giri  286 (337)
                      +++|+++|.+.| |+++.   +.++.+|.++.... + ..+....+++.|..+....   |+++
T Consensus       351 a~~la~~l~~~~~~e~~~---~p~l~~V~fr~~~~~~~~~~~~~~~~~~gw~v~~~~~~~~~~~  411 (460)
T COG0076         351 ARYLAEELEKLGDFELVN---EPELPIVAFRLKDDEDTLADLSERLDRRGWQVPAQLLPKGLAI  411 (460)
T ss_pred             HHHHHHHHHhCCCcEeec---CCccceEEEEcCCcccchhchHHHHHhcCceeecccCCcccee
Confidence            999999999987 99986   44666666665331 1 4555666766677766433   5554

>PRK02936 argD acetylornithine aminotransferase; Provisional

Probab=98.87  E-value=1.4e-07  Score=91.96  Aligned_cols=237  Identities=12%  Similarity=0.033  Sum_probs=142.1

Q ss_pred             ccceeeeccCC---CC---CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecC
Q psy10669         30 INGIELIASEN---FT---SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPY  103 (337)
Q Consensus        30 ~~~i~l~asen---~~---~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~  103 (337)
                      .+.+.-+.|++   ++   +|.|.+++...+.+ +.  ..+..+      ..+++....+++.+.++.+.     .+.++
T Consensus        28 G~~~lD~~s~~~~~~lG~~~p~v~~a~~~~~~~-~~--~~~~~~------~~~~~~~la~~l~~~~~~~~-----~~~~~   93 (377)
T PRK02936         28 GKTYLDFTSGIAVCNLGHCHPTVTKAVQEQLDD-IW--HVSNLF------TNSLQEEVASLLAENSAGDL-----VFFCN   93 (377)
T ss_pred             CCEEEECCcchhhccCCCCCHHHHHHHHHHHHh-cc--cccccc------CCHHHHHHHHHHHhcCCCCE-----EEEeC
Confidence            34455556665   44   89999999877553 21  111111      12344333356666666442     46678


Q ss_pred             CCchhHHHHHHhhC---Cc----------------------------------------------ccc-----cccEEEE
Q psy10669        104 SGSPANFAVCEKAL---PT----------------------------------------------NNA-----RFDFLSS  129 (337)
Q Consensus       104 Sgt~AN~~v~~aLl---~~----------------------------------------------~~a-----~pklII~  129 (337)
                      ||+.||.+++....   ++                                              .++     ++++||+
T Consensus        94 sG~~a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~ii~  173 (377)
T PRK02936         94 SGAEANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNEEVAAVML  173 (377)
T ss_pred             CcHHHHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhccCCeEEEEE
Confidence            99999988877431   11                                              000     1356666


Q ss_pred             cCccccc-------ccChHHHHHHhhhcCCeEEEeccccccccc-e---------e---eeec-c------CCchhhh--
Q psy10669        130 GTTCYSR-------CLDYARFRQICDETDSIMFADMSHISGLIA-G---------V---KGVT-K------TGEKILY--  180 (337)
Q Consensus       130 ~~S~~~~-------~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-g---------~---~~T~-~------~Gg~i~~--  180 (337)
                      . +..++       +.++++|+++|+++|+++++|+.|. |+-- |         +   +.|. |      .+|++++  
T Consensus       174 e-~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~-g~g~~g~~~~~~~~~~~~di~t~sK~l~~G~~ig~v~~~~  251 (377)
T PRK02936        174 E-VVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQT-GIGRTGTLFAYEQFGLDPDIVTVAKGLGNGIPVGAMIGKK  251 (377)
T ss_pred             e-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCchhhHHHhhCCCCcEEEEcccccCCCccEEEEEcH
Confidence            4 23322       2337788899999999999999994 5421 1         0   1121 2      1344443  


Q ss_pred             hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCEEecC-CCCCeEEEEEe
Q psy10669        181 DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYHVVTG-GTDVHLILIDL  257 (337)
Q Consensus       181 ~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~v~~~-~t~~h~v~V~~  257 (337)
                      ++.+.+.......++ +.++...++...++..+.   .+++.+++.++.++|++.|.+.  ++..... .....++++.+
T Consensus       252 ~~~~~~~~~~~~~t~-~~~~~~~aaa~a~l~~~~---~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~  327 (377)
T PRK02936        252 ELGTAFGPGSHGSTF-GGNPLAMAAAKEVLQVIK---QPSFLEEVQEKGEYFLQKLQEELEHLECVKNIRGKGLMIGIEC  327 (377)
T ss_pred             HHHhhccCCCCCCCC-CCCHHHHHHHHHHHHHHH---hccHHHHHHHHHHHHHHHHHHHHhhCCcEEeEeecceEEEEEe
Confidence            566666543333333 457777777777776653   2467789999999999999873  3433220 12457788887


Q ss_pred             cCCCcchHHHHHHHhhcCceeccCc--ccchhhh
Q psy10669        258 RKNKLTGSKVELVLEEIAIACNKNT--GISLAAE  289 (337)
Q Consensus       258 ~~~~~~~~~~~~~L~~~gI~v~~~~--girig~~  289 (337)
                      .+.   ...+.+.|.+.||.+.+..  .|||..+
T Consensus       328 ~~~---~~~~~~~l~~~gv~v~~~g~~~lRi~p~  358 (377)
T PRK02936        328 TEE---VAPVIEQLREEGLLVLSAGPNVIRLLPP  358 (377)
T ss_pred             cch---HHHHHHHHHHCCeEEecCCCCEEEEECC
Confidence            643   5667788888899887543  6787743

>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional

Probab=98.86  E-value=4.4e-07  Score=90.84  Aligned_cols=193  Identities=17%  Similarity=0.172  Sum_probs=121.5

Q ss_pred             hHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhC---------Cc------------------------
Q psy10669         73 FIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL---------PT------------------------  119 (337)
Q Consensus        73 ~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl---------~~------------------------  119 (337)
                      ...++|    +++++++|.++     .+..+||+.|+..++.+++         ++                        
T Consensus        64 ~~~~fe----~~lA~~~g~~~-----~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~  134 (438)
T PRK15407         64 FNDAFE----KKLAEFLGVRY-----ALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLV  134 (438)
T ss_pred             hHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCE
Confidence            356777    57889999875     5777889999988887762         22                        


Q ss_pred             ------------------ccc---cccEEEEcCcccccccChHHHHHHhhhcCCeEEEeccccccccc-----e-----e
Q psy10669        120 ------------------NNA---RFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA-----G-----V  168 (337)
Q Consensus       120 ------------------~~a---~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----g-----~  168 (337)
                                        +.+   ++|+|++.+ .++.+.|+++|.++|+++|++|++|+||+.|..-     |     .
T Consensus       135 pv~vdvd~~~~~id~~~le~~i~~~tkaVi~~~-~~G~p~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~~~G~~gd~~  213 (438)
T PRK15407        135 PVFVDVELPTYNIDASLLEAAVSPKTKAIMIAH-TLGNPFDLAAVKAFCDKHNLWLIEDNCDALGSTYDGRMTGTFGDIA  213 (438)
T ss_pred             EEEEecCCCcCCcCHHHHHHHcCcCCeEEEEeC-CCCChhhHHHHHHHHHHCCCEEEEECccchhhhcCCeeeeccCceE
Confidence                              101   268888875 5788899999999999999999999999987643     1     1


Q ss_pred             eee-c--c-----CCchhhh---hHHHHHhhccCCCC-----------------------------------CC-CCc-H
Q psy10669        169 KGV-T--K-----TGEKILY---DYEEKINNAVFPSL-----------------------------------QG-GPH-N  200 (337)
Q Consensus       169 ~~T-~--~-----~Gg~i~~---~l~~~i~~~~~p~~-----------------------------------~g-~~~-~  200 (337)
                      +++ +  |     .||++++   ++.+++......+.                                   .| +.. .
T Consensus       214 ~fSf~~~k~~~~geGG~l~t~d~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~rms  293 (438)
T PRK15407        214 TLSFYPAHHITMGEGGAVFTNDPLLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHKYTYSHLGYNLKIT  293 (438)
T ss_pred             EEeCCCCCCccccCceEEEECCHHHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccccccCcc
Confidence            111 1  2     3788876   34443221100000                                   00 111 1


Q ss_pred             HHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-C-CEEec--CCCC--CeEEEEEecC-CCcchHHHHHHHhh
Q psy10669        201 HAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-G-YHVVT--GGTD--VHLILIDLRK-NKLTGSKVELVLEE  273 (337)
Q Consensus       201 ~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G-~~v~~--~~t~--~h~v~V~~~~-~~~~~~~~~~~L~~  273 (337)
                      ...||+  ++.++  ..+++..++-.+|++++.+.|.+. | +.+..  .++.  -|..+|.+.. .+.+-.++.+.|.+
T Consensus       294 el~AAi--g~~qL--~~l~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Rd~l~~~L~~  369 (438)
T PRK15407        294 DMQAAI--GLAQL--EKLPGFIEARKANFAYLKEGLASLEDFLILPEATPNSDPSWFGFPITVKEDAGFTRVELVKYLEE  369 (438)
T ss_pred             HHHHHH--HHHHH--HHHHHHHHHHHHHHHHHHHHhccCCCccccCcCCCCCeeEEEEEEEEECCcCCCCHHHHHHHHHH
Confidence            223333  33344  346677888889999999999764 3 22221  1121  2466666643 24456788899999


Q ss_pred             cCceec
Q psy10669        274 IAIACN  279 (337)
Q Consensus       274 ~gI~v~  279 (337)
                      .||.++
T Consensus       370 ~GI~~~  375 (438)
T PRK15407        370 NKIGTR  375 (438)
T ss_pred             CCCCcc
Confidence            999765

>PRK06225 aspartate aminotransferase; Provisional

Probab=98.86  E-value=1.1e-06  Score=85.77  Aligned_cols=234  Identities=14%  Similarity=0.123  Sum_probs=135.5

Q ss_pred             ccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-c
Q psy10669         30 INGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-S  106 (337)
Q Consensus        30 ~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t  106 (337)
                      .+.|+|-..+|-+  +|.+.+++...+......      .|...+...++    |+.+++++|.++    .+|.+++| +
T Consensus        28 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~------~y~~~~g~~~l----r~~ia~~l~~~~----~~v~~~~g~t   93 (380)
T PRK06225         28 KEMIWMGQNTNHLGPHEEVREAMIRCIEEGEYC------KYPPPEGFPEL----RELILKDLGLDD----DEALITAGAT   93 (380)
T ss_pred             CCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCC------CCCCCcchHHH----HHHHHHhcCCCC----CcEEEeCCHH
Confidence            4566676666644  899999988765432111      12211222333    467889999876    36777776 6


Q ss_pred             hhHHHHHHhhCCc----------------------------c--------------cc-----cccEEEEc-Ccc-cccc
Q psy10669        107 PANFAVCEKALPT----------------------------N--------------NA-----RFDFLSSG-TTC-YSRC  137 (337)
Q Consensus       107 ~AN~~v~~aLl~~----------------------------~--------------~a-----~pklII~~-~S~-~~~~  137 (337)
                      +++..++.+++++                            .              +.     ++++|++. +++ .+..
T Consensus        94 ~al~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~  173 (380)
T PRK06225         94 ESLYLVMRAFLSPGDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMDENTRLIYLIDPLNPLGSS  173 (380)
T ss_pred             HHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcCCCceEEEEeCCCCCCCcC
Confidence            7877777887653                            0              00     15676654 433 2344


Q ss_pred             c---ChHHHHHHhhhcCCeEEEecccc---cc------ccc---eeeeec-c----CC---chhhh--hHHHHHhhccCC
Q psy10669        138 L---DYARFRQICDETDSIMFADMSHI---SG------LIA---GVKGVT-K----TG---EKILY--DYEEKINNAVFP  192 (337)
Q Consensus       138 ~---d~~~l~eia~~~ga~l~vD~AH~---~G------li~---g~~~T~-~----~G---g~i~~--~l~~~i~~~~~p  192 (337)
                      .   ++++|.++|+++|+++++|+++.   .+      +..   .+..|. |    .|   |+++.  ++.+.+......
T Consensus       174 ~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RiG~i~~~~~l~~~~~~~~~~  253 (380)
T PRK06225        174 YTEEEIKEFAEIARDNDAFLLHDCTYRDFAREHTLAAEYAPEHTVTSYSFSKIFGMAGLRIGAVVATPDLIEVVKSIVIN  253 (380)
T ss_pred             CCHHHHHHHHHHHHHCCcEEEEehhHHHHhccCCchhhcCCCCEEEEeechhhcCCccceeEEEecCHHHHHHHHHHHhc
Confidence            4   46677788999999999999852   11      100   112221 2    22   66655  565655543221


Q ss_pred             CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-CCCEEecCCCCCeEEEEEecCCCcchHHHHHHH
Q psy10669        193 SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-RGYHVVTGGTDVHLILIDLRKNKLTGSKVELVL  271 (337)
Q Consensus       193 ~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L  271 (337)
                       .. +.+....++...++... ....+..++...++.+.+.+.|.+ .|+.+...+.....+++++...+++..++.+.|
T Consensus       254 -~~-~~~~~~~~~a~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~l  330 (380)
T PRK06225        254 -DL-GTNVIAQEAAIAGLKVK-DEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNMMVIDISEAGIDPEDLVEYL  330 (380)
T ss_pred             -cc-CCCHHHHHHHHHHHhcc-hHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeEEEEEcccccCCHHHHHHHH
Confidence             12 23344444444444332 112234444555677778888887 465432122456677888876667888899999


Q ss_pred             hhcCceecc
Q psy10669        272 EEIAIACNK  280 (337)
Q Consensus       272 ~~~gI~v~~  280 (337)
                      .+.||.+.+
T Consensus       331 ~~~gi~v~~  339 (380)
T PRK06225        331 LERKIFVRQ  339 (380)
T ss_pred             HHCCEEEcC
Confidence            888999875

>PRK06108 aspartate aminotransferase; Provisional

Probab=98.86  E-value=2.1e-06  Score=83.58  Aligned_cols=236  Identities=13%  Similarity=0.063  Sum_probs=134.5

Q ss_pred             ccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcC--CCCCCCcceeecCCC
Q psy10669         30 INGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFN--LDPEQWGCNVQPYSG  105 (337)
Q Consensus        30 ~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg--~~~~~~~~~v~~~Sg  105 (337)
                      .+.|+|...++-.  ++.+++++...+.+.    .   ..|.-..-..++.....+.+.+.+|  .+.    .+|.+++|
T Consensus        24 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~----~---~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~----~~i~~t~g   92 (382)
T PRK06108         24 EGVLPLWFGESDLPTPDFIRDAAAAALADG----E---TFYTHNLGIPELREALARYVSRLHGVATPP----ERIAVTSS   92 (382)
T ss_pred             CCeEEecCCCCCCCCCHHHHHHHHHHHhcC----C---CCCCCCCCCHHHHHHHHHHHHHHhCCCcCc----ceEEEeCC
Confidence            3567888777655  788999887654331    1   1122222223333333345666677  443    25666666


Q ss_pred             -chhHHHHHHhhCCc--------------------------------c-----c-------c---cccEEEEc-Ccc-cc
Q psy10669        106 -SPANFAVCEKALPT--------------------------------N-----N-------A---RFDFLSSG-TTC-YS  135 (337)
Q Consensus       106 -t~AN~~v~~aLl~~--------------------------------~-----~-------a---~pklII~~-~S~-~~  135 (337)
                       +.++..++.+++++                                +     .       +   ++++|++. +++ .+
T Consensus        93 ~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~i~l~~p~NPtG  172 (382)
T PRK06108         93 GVQALMLAAQALVGPGDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAITPRTRALFINSPNNPTG  172 (382)
T ss_pred             hHHHHHHHHHHhcCCCCEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcCccceEEEEECCCCCCC
Confidence             67877777887654                                0     0       0   15666664 322 23


Q ss_pred             cccC---hHHHHHHhhhcCCeEEEeccccccccc------------------eeeeec-c----CC---chhhh--hHHH
Q psy10669        136 RCLD---YARFRQICDETDSIMFADMSHISGLIA------------------GVKGVT-K----TG---EKILY--DYEE  184 (337)
Q Consensus       136 ~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~------------------g~~~T~-~----~G---g~i~~--~l~~  184 (337)
                      ...+   +++|.++|+++|+++++|++|.-....                  .++.|. |    .|   |+++.  ++.+
T Consensus       173 ~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~~~  252 (382)
T PRK06108        173 WTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAPPALGQ  252 (382)
T ss_pred             cccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeCCHHHHH
Confidence            4444   456778889999999999997643221                  112333 2    13   55554  5666


Q ss_pred             HHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCCCcc
Q psy10669        185 KINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKNKLT  263 (337)
Q Consensus       185 ~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~~~~  263 (337)
                      .+.... .....+++....++...++..- ....++.++++.++.+++.+.|.+. |+++..+ ..+..+++.+.... +
T Consensus       253 ~~~~~~-~~~~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p-~~g~~~~~~l~~~~-~  328 (382)
T PRK06108        253 VLEKLI-EYNTSCVAQFVQRAAVAALDEG-EDFVAELVARLRRSRDHLVDALRALPGVEVAKP-DGAMYAFFRIPGVT-D  328 (382)
T ss_pred             HHHHHH-HhcccCCChHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCC-CeeEEEEEeCCCCC-C
Confidence            555432 2222334444444444444332 1234677888888888899999875 8877642 22445567775432 5


Q ss_pred             hHHHHHHH-hhcCceecc
Q psy10669        264 GSKVELVL-EEIAIACNK  280 (337)
Q Consensus       264 ~~~~~~~L-~~~gI~v~~  280 (337)
                      ..++.+.| ++.||.+.+
T Consensus       329 ~~~~~~~ll~~~gV~v~p  346 (382)
T PRK06108        329 SLALAKRLVDEAGLGLAP  346 (382)
T ss_pred             HHHHHHHHHHhCCEEEeC
Confidence            56666655 678999865

>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed

Probab=98.85  E-value=4.8e-07  Score=89.24  Aligned_cols=230  Identities=14%  Similarity=0.043  Sum_probs=135.0

Q ss_pred             CCC---CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhh
Q psy10669         40 NFT---SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKA  116 (337)
Q Consensus        40 n~~---~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aL  116 (337)
                      +++   +|.|.+++...+.+ +. + .  +.+..++...+++    ++++++++.+.     ...++||+.||.+++...
T Consensus        52 ~~lGh~~p~v~~a~~~~~~~-~~-~-~--~~~~~~~~~~~l~----~~l~~~~~~~~-----~~~~~sGseA~e~a~kla  117 (403)
T PRK05093         52 TALGHCHPALVKALKEQGEK-LW-H-I--SNVFTNEPALRLA----KKLIDATFAER-----VFFANSGAEANEAAFKLA  117 (403)
T ss_pred             ccCCCCCHHHHHHHHHHHHh-cC-c-c--cCccCCHHHHHHH----HHHHhhCCCCE-----EEEeCchHHHHHHHHHHH
Confidence            555   99999999876543 21 1 1  1222333334444    46777777653     577799999998888743


Q ss_pred             ---------CCc------------------------------------------------c--cc-cccEEEEcCccccc
Q psy10669        117 ---------LPT------------------------------------------------N--NA-RFDFLSSGTTCYSR  136 (337)
Q Consensus       117 ---------l~~------------------------------------------------~--~a-~pklII~~~S~~~~  136 (337)
                               ..+                                                +  +. ++++||+. .++++
T Consensus       118 r~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aaiiie-p~~~~  196 (403)
T PRK05093        118 RRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPFNDLAAVKAVIDDHTCAVVVE-PIQGE  196 (403)
T ss_pred             HHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCCCCHHHHHHHhcCCeEEEEEe-cccCC
Confidence                     011                                                0  00 14677776 46665


Q ss_pred             ccC-------hHHHHHHhhhcCCeEEEeccccccccc-e---------e---eeec-c--CCchhh----h--hHHHHHh
Q psy10669        137 CLD-------YARFRQICDETDSIMFADMSHISGLIA-G---------V---KGVT-K--TGEKIL----Y--DYEEKIN  187 (337)
Q Consensus       137 ~~d-------~~~l~eia~~~ga~l~vD~AH~~Gli~-g---------~---~~T~-~--~Gg~i~----~--~l~~~i~  187 (337)
                      .+.       +++|.++|+++|+++++|+.|. |+.- |         +   ..|. |  .+|+-+    .  ++.+.+.
T Consensus       197 gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~g~~g~~~~~~~~~~~pdi~s~sK~l~~G~rig~vv~~~~i~~~l~  275 (403)
T PRK05093        197 GGVIPATPEFLQGLRELCDQHNALLIFDEVQT-GMGRTGDLFAYMHYGVTPDILTSAKALGGGFPIGAMLTTAEIASHFK  275 (403)
T ss_pred             CCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCCCccchhhhhcCCCCCEEEecccccCCcceEEEEEcHHHHhhcC
Confidence            443       5678899999999999999998 5421 1         0   1111 2  123222    2  4656665


Q ss_pred             hccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCE--Eec-CCCCCeEEEEEecCCC-cc
Q psy10669        188 NAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYH--VVT-GGTDVHLILIDLRKNK-LT  263 (337)
Q Consensus       188 ~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~--v~~-~~t~~h~v~V~~~~~~-~~  263 (337)
                      .......+ +.+++..++...++..+.+   .++.+++.++.++|.+.|.+.+.+  +.. .....-++.+.+.+.. -.
T Consensus       276 ~~~~~~t~-~~~~~~~~aa~a~L~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~~~~~l~~~~~~~  351 (403)
T PRK05093        276 VGTHGSTY-GGNPLACAVAEAVFDIINT---PEVLEGVKARRQRFVDGLQKINQKYGVFSEIRGMGLLIGAELKPQYKGR  351 (403)
T ss_pred             CCCCCCCC-CCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCeEeEeeCceEEEEEecCcchhH
Confidence            43333334 3555666666666655532   356788999999999999885422  211 0012344555554321 13


Q ss_pred             hHHHHHHHhhcCceeccCc--ccchhhh
Q psy10669        264 GSKVELVLEEIAIACNKNT--GISLAAE  289 (337)
Q Consensus       264 ~~~~~~~L~~~gI~v~~~~--girig~~  289 (337)
                      ..++...|.+.||.+.+..  .+||..+
T Consensus       352 ~~~~~~~l~~~Gv~v~~~g~~~lRl~~~  379 (403)
T PRK05093        352 ARDFLNAAAEEGVMVLVAGPDVLRFAPS  379 (403)
T ss_pred             HHHHHHHHHHCCeEEecCCCCEEEEeCC
Confidence            4566677777799987532  6777533

>cd00610 OAT_like Acetyl ornithine aminotransferase family

Probab=98.85  E-value=2.2e-07  Score=91.33  Aligned_cols=238  Identities=15%  Similarity=0.119  Sum_probs=140.3

Q ss_pred             cceeeeccCCC-----CCHHHHHHHhhhhhhccCCCCCCCcCcCc---cchHHHHHHHHHHHHHhhcCCCCCCCcceeec
Q psy10669         31 NGIELIASENF-----TSLAVLECLGSCLQNKYSEGLPGKRYYGG---NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQP  102 (337)
Q Consensus        31 ~~i~l~asen~-----~~p~V~~a~~~~l~~~y~~g~~g~r~~~G---~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~  102 (337)
                      ..|.+...+++     .+|.|.+++...+. +.      .++..+   +....+++    ++++++++.+.+   ..+.+
T Consensus        37 ~~id~~~~~~~~~lG~~~p~v~~a~~~~~~-~~------~~~~~~~~~~~~~~~l~----~~l~~~~~~~~~---~v~~~  102 (413)
T cd00610          37 RYLDFLSGIGVLNLGHNHPEVVEALKEQLA-KL------THFSLGFFYNEPAVELA----ELLLALTPEGLD---KVFFV  102 (413)
T ss_pred             EEEEcCccHHhhccCCCCHHHHHHHHHHHH-hC------cCccCcccCCHHHHHHH----HHHHHhCCCCCC---EEEEc
Confidence            34555444443     38999999987653 21      222222   22233444    688899985332   23556


Q ss_pred             CCCchhHHHHHHhhC---Cc------------------------------------------c-----------c-----
Q psy10669        103 YSGSPANFAVCEKAL---PT------------------------------------------N-----------N-----  121 (337)
Q Consensus       103 ~Sgt~AN~~v~~aLl---~~------------------------------------------~-----------~-----  121 (337)
                      +||+.||.+++..+.   +.                                          .           -     
T Consensus       103 ~sgsea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~  182 (413)
T cd00610         103 NSGTEAVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALE  182 (413)
T ss_pred             CcHHHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHH
Confidence            777999988877652   11                                          0           0     


Q ss_pred             ----c---cccEEEEcCccccc---ccC----hHHHHHHhhhcCCeEEEeccccccc--cc--------e----eeeecc
Q psy10669        122 ----A---RFDFLSSGTTCYSR---CLD----YARFRQICDETDSIMFADMSHISGL--IA--------G----VKGVTK  173 (337)
Q Consensus       122 ----a---~pklII~~~S~~~~---~~d----~~~l~eia~~~ga~l~vD~AH~~Gl--i~--------g----~~~T~~  173 (337)
                          .   ++++||+.+ ++++   ..+    +++|.++|+++|+++++|++|+ |+  .+        +    +.+..|
T Consensus       183 ~~l~~~~~~~~~vi~~p-~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~-g~g~~g~~~~~~~~~~~~d~~t~sK  260 (413)
T cd00610         183 EALEEHPEEVAAVIVEP-IQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQT-GFGRTGKMFAFEHFGVEPDIVTLGK  260 (413)
T ss_pred             HHHhcCCCCEEEEEEcc-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCcchhhHhhcCCCCCeEEEcc
Confidence                0   134666653 5544   344    7788999999999999999997 33  11        1    111122


Q ss_pred             -------CCchhhh-hHHHHH--hhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCC--
Q psy10669        174 -------TGEKILY-DYEEKI--NNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGY--  241 (337)
Q Consensus       174 -------~Gg~i~~-~l~~~i--~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~--  241 (337)
                             -|+++.. ++.+.+  ....+.. ..+.++..+++...++..+.+   ++..+++.++.++|++.|++.+.  
T Consensus       261 ~l~~g~~~g~~~~~~~~~~~~~~~~~~~~~-t~~~~~~~~~a~~a~l~~l~~---~~~~~~~~~~~~~l~~~l~~~~~~~  336 (413)
T cd00610         261 GLGGGLPLGAVLGREEIMDAFPAGPGLHGG-TFGGNPLACAAALAVLEVLEE---EGLLENAAELGEYLRERLRELAEKH  336 (413)
T ss_pred             cccCccccEEEEEcHHHHHhhccCCCCCCC-CCCcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhC
Confidence                   1332222 465554  2222222 224455566666666665533   46788999999999999887532  


Q ss_pred             EEec-CCCCCeEEEEEecCCC-------cchHHHHHHHhhcCceeccC--cccchhh
Q psy10669        242 HVVT-GGTDVHLILIDLRKNK-------LTGSKVELVLEEIAIACNKN--TGISLAA  288 (337)
Q Consensus       242 ~v~~-~~t~~h~v~V~~~~~~-------~~~~~~~~~L~~~gI~v~~~--~girig~  288 (337)
                      .+.. .....+++++.+.+..       .....+.+.|.+.||.+.+.  ..+|+..
T Consensus       337 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~~~~~~lR~~~  393 (413)
T cd00610         337 PLVGDVRGRGLMIGIELVKDRATKPPDKELAAKIIKAALERGLLLRPSGGNVIRLLP  393 (413)
T ss_pred             CcEEEeecCceEEEEEEecCCCcCCcchHHHHHHHHHHHHCCeEEeecCCCEEEEEC
Confidence            2221 1235677888876542       34567778888889999875  2567653

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.

>PRK08133 O-succinylhomoserine sulfhydrylase; Validated

Probab=98.85  E-value=5.8e-08  Score=95.66  Aligned_cols=222  Identities=15%  Similarity=0.157  Sum_probs=133.2

Q ss_pred             eeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHH
Q psy10669         35 LIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCE  114 (337)
Q Consensus        35 l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~  114 (337)
                      ...+..|..+.+.++.... ..+ ..|++.+|+  ++...+++|    +++++++|.++     .+.++||+.|+..++.
T Consensus        28 i~~~~~~~~~~~~~~~~~~-~~~-~~~~~y~r~--~~p~~~~le----~~la~l~g~~~-----~v~~ssG~~Ai~~al~   94 (390)
T PRK08133         28 LFLTSSFVFESAAEAAARF-AGE-EPGNIYSRF--TNPTVTMFQ----ERLAALEGAEA-----CVATASGMAAILAVVM   94 (390)
T ss_pred             ccCCCCcccCCHHHHHHhh-cCC-cCCceeECC--CChHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHH
Confidence            5555666667776665432 212 124444454  355567777    57889999986     5888899999988888


Q ss_pred             hhCCc----------------------------------------ccc---cccEEEEc-Ccc-cccccChHHHHHHhhh
Q psy10669        115 KALPT----------------------------------------NNA---RFDFLSSG-TTC-YSRCLDYARFRQICDE  149 (337)
Q Consensus       115 aLl~~----------------------------------------~~a---~pklII~~-~S~-~~~~~d~~~l~eia~~  149 (337)
                      +++++                                        +.+   ++|+|++. +++ .+...|+++|.++|++
T Consensus        95 al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~~i~~~tklV~ie~p~NptG~v~dl~~I~~la~~  174 (390)
T PRK08133         95 ALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDLTDLDAWRAAVRPNTKLFFLETPSNPLTELADIAALAEIAHA  174 (390)
T ss_pred             HHhCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECCCCHHHHHHhcCcCCeEEEEECCCCCCCCcCCHHHHHHHHHH
Confidence            88754                                        111   26888874 444 4688899999999999


Q ss_pred             cCCeEEEeccccccccc-----e---ee-eecc--------CCchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHH
Q psy10669        150 TDSIMFADMSHISGLIA-----G---VK-GVTK--------TGEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAM  210 (337)
Q Consensus       150 ~ga~l~vD~AH~~Gli~-----g---~~-~T~~--------~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~  210 (337)
                      +|+++++|++|..++..     |   ++ |.+|        .||+++.  ++.+++......  .|....+.-+.+  .+
T Consensus       175 ~gi~livD~t~~~~~~~~pl~~g~Divv~S~sK~~~g~g~~~GG~vv~~~~~~~~~~~~~~~--~g~~~~~~~a~~--~l  250 (390)
T PRK08133        175 AGALLVVDNCFCTPALQQPLKLGADVVIHSATKYLDGQGRVLGGAVVGSKELMEEVFGFLRT--AGPTLSPFNAWV--FL  250 (390)
T ss_pred             cCCEEEEECCCcccccCCchhhCCcEEEeecceeecCCcceEeEEEEcCHHHHHHHHHHHHH--hCCCCCHHHHHH--HH
Confidence            99999999999877643     1   22 2222        2577765  333333322111  122222222222  22


Q ss_pred             HHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCE-EecCCCCC---------------eEEEEEecCCCcchHHHHHHHhh
Q psy10669        211 LQAQSDEFKSYQAQVKANASHLSDEMIKR-GYH-VVTGGTDV---------------HLILIDLRKNKLTGSKVELVLEE  273 (337)
Q Consensus       211 ~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~-v~~~~t~~---------------h~v~V~~~~~~~~~~~~~~~L~~  273 (337)
                      ..+  .....+.++..+|++.+++.|.+. ++. |+..+..+               -++.+++.  + +...+.+.++.
T Consensus       251 ~gl--~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l~--~-~~~~~~~f~~~  325 (390)
T PRK08133        251 KGL--ETLSLRMEAHSANALALAEWLEAHPGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVK--G-GREAAWRVIDA  325 (390)
T ss_pred             ccc--chHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEEc--C-CHHHHHHHHHh
Confidence            222  245677888889999999999984 554 22222222               25555553  2 33445566666


Q ss_pred             cCcee
Q psy10669        274 IAIAC  278 (337)
Q Consensus       274 ~gI~v  278 (337)
                      ..+..
T Consensus       326 l~l~~  330 (390)
T PRK08133        326 TRLIS  330 (390)
T ss_pred             CCcce
Confidence            55543

>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional

Probab=98.83  E-value=4e-07  Score=90.06  Aligned_cols=232  Identities=15%  Similarity=0.091  Sum_probs=133.4

Q ss_pred             CCCC---CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHh
Q psy10669         39 ENFT---SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEK  115 (337)
Q Consensus        39 en~~---~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~a  115 (337)
                      .+++   +|.|.+|+...+. ++.  ..+..+  .+....+++    ++++++++.+.     ...+.||+.||.++++.
T Consensus        50 ~~~lGh~~p~v~~A~~~~~~-~~~--~~~~~~--~~~~~~~la----~~l~~~~~~~~-----v~~~~sGseA~e~Alk~  115 (406)
T PRK12381         50 VNALGHAHPALREALNEQAS-KFW--HTGNGY--TNEPVLRLA----KKLIDATFADR-----VFFCNSGAEANEAALKL  115 (406)
T ss_pred             hccCCCCCHHHHHHHHHHHh-hcc--cccCcc--CCHHHHHHH----HHHHhhCCCCe-----EEEcCCcHHHHHHHHHH
Confidence            4555   9999999987654 321  112211  122223333    57778776543     46668899999888776


Q ss_pred             hC---------Cc------------------------------------------------c--cc-cccEEEEcCcccc
Q psy10669        116 AL---------PT------------------------------------------------N--NA-RFDFLSSGTTCYS  135 (337)
Q Consensus       116 Ll---------~~------------------------------------------------~--~a-~pklII~~~S~~~  135 (337)
                      ..         ++                                                +  +. ++++||+. .+++
T Consensus       116 ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aaviiE-Pv~~  194 (406)
T PRK12381        116 ARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALIDDQTCAVIVE-PIQG  194 (406)
T ss_pred             HHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhccCCeeEEEEe-CCcC
Confidence            30         11                                                0  00 14567775 4666


Q ss_pred             ccc-------ChHHHHHHhhhcCCeEEEeccccccccc-e---------e---eeec-c--CCchhhh------hHHHHH
Q psy10669        136 RCL-------DYARFRQICDETDSIMFADMSHISGLIA-G---------V---KGVT-K--TGEKILY------DYEEKI  186 (337)
Q Consensus       136 ~~~-------d~~~l~eia~~~ga~l~vD~AH~~Gli~-g---------~---~~T~-~--~Gg~i~~------~l~~~i  186 (337)
                      +.+       .+++|+++|+++|++||+|+.| .|+-- |         +   ..|. |  .||+.++      ++.+.+
T Consensus       195 ~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~-tG~gr~G~~~~~~~~~v~pDi~t~sK~l~gG~~ig~~~~~~~~~~~~  273 (406)
T PRK12381        195 EGGVIPADKAFLQGLRELCDRHNALLIFDEVQ-TGVGRTGELYAYMHYGVTPDVLTTAKALGGGFPIGAMLTTEKCASVM  273 (406)
T ss_pred             CCCCcCCCHHHHHHHHHHHHHcCCEEEEcchh-hCCCCCcchhhhHhhCCCCCEEEehhhhhCCCceEEEEEcHHHHhhc
Confidence            543       3456889999999999999999 56511 1         1   1121 2  1454432      455555


Q ss_pred             hhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC--CEEecC-CCCCeEEEEEecCCC-c
Q psy10669        187 NNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG--YHVVTG-GTDVHLILIDLRKNK-L  262 (337)
Q Consensus       187 ~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G--~~v~~~-~t~~h~v~V~~~~~~-~  262 (337)
                      ....+..++ +.++...++...++..+.+   ++.++++.++.++|.+.|.+.+  +.++.. .....++.+.+.+.. -
T Consensus       274 ~~~~~~~t~-~~~pl~~aaa~a~l~~l~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~Gl~~~~~l~~~~~~  349 (406)
T PRK12381        274 TVGTHGTTY-GGNPLASAVAGKVLELINT---PEMLNGVKQRHDWFVERLNTINARYGLFSEIRGLGLLIGCVLNAEYAG  349 (406)
T ss_pred             CCCCCCCCC-CCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCEEEEecCeEEEEEEecCchhh
Confidence            543333333 3455666666666655432   3578889999999999998854  332220 012334455554321 1


Q ss_pred             chHHHHHHHhhcCceeccCc--ccchhhhh
Q psy10669        263 TGSKVELVLEEIAIACNKNT--GISLAAEI  290 (337)
Q Consensus       263 ~~~~~~~~L~~~gI~v~~~~--girig~~~  290 (337)
                      ....+.+.|.+.||.+....  .|||..+.
T Consensus       350 ~~~~~~~~l~~~Gv~v~~~g~~~lRl~p~~  379 (406)
T PRK12381        350 KAKQISQEAAKAGVMVLIAGPNVVRFAPAL  379 (406)
T ss_pred             HHHHHHHHHHHCCcEEeeCCCCEEEEeCCc
Confidence            34567777888899986422  57776443

>PRK09082 methionine aminotransferase; Validated

Probab=98.82  E-value=1.5e-06  Score=85.18  Aligned_cols=259  Identities=13%  Similarity=0.112  Sum_probs=145.3

Q ss_pred             hhhhcHHHHHHHHHHHhhcccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhh
Q psy10669         11 LAQTDPELYSLIKKEKHRQINGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKA   88 (337)
Q Consensus        11 l~~~d~~~~~~~~~e~~rq~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~l   88 (337)
                      +....+.++..+.+..+ +..-|+|-..++-.  ++.+.+++...+...+ .+|+.   ..|.   .++.....+.+.++
T Consensus        12 ~~~~~~~~~~~~~~~~~-~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~-~~Y~~---~~G~---~~lr~~~a~~l~~~   83 (386)
T PRK09082         12 LPNVGTTIFTVMSALAA-EHGAINLSQGFPDFDGPPYLVEALAYAMAAGH-NQYPP---MTGV---AALREAIAAKTARL   83 (386)
T ss_pred             hhccCccHHHHHHHHHh-hCCEEEecCCCCCCCCCHHHHHHHHHHHHcCC-CCCCC---CCCc---HHHHHHHHHHHHHH
Confidence            33344445444443322 23446666544433  6888888876543211 11211   1222   33433334566778


Q ss_pred             cCCCCCCCcceeecCCC-chhHHHHHHhhCCc-------------------------------------------ccc--
Q psy10669         89 FNLDPEQWGCNVQPYSG-SPANFAVCEKALPT-------------------------------------------NNA--  122 (337)
Q Consensus        89 fg~~~~~~~~~v~~~Sg-t~AN~~v~~aLl~~-------------------------------------------~~a--  122 (337)
                      +|.+...- -+|.+++| ++|...++.+++++                                           +..  
T Consensus        84 ~~~~~~~~-~~i~~t~G~~~al~~~~~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~  162 (386)
T PRK09082         84 YGRQYDAD-SEITVTAGATEALFAAILALVRPGDEVIVFDPSYDSYAPAIELAGGRAVRVALQPPDFRVDWQRFAAAISP  162 (386)
T ss_pred             hCCCCCCC-CcEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccccCCHHHHHHhcCc
Confidence            88642100 14777777 67887777888654                                           001  


Q ss_pred             cccEEEEcCcccc--cc---cChHHHHHHhhhcCCeEEEeccccccccc-----------e------eeeec-c----CC
Q psy10669        123 RFDFLSSGTTCYS--RC---LDYARFRQICDETDSIMFADMSHISGLIA-----------G------VKGVT-K----TG  175 (337)
Q Consensus       123 ~pklII~~~S~~~--~~---~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----------g------~~~T~-~----~G  175 (337)
                      ++++|++..-.++  ..   -++++|.++|+++|+++++|+++.-....           +      +.++. |    .|
T Consensus       163 ~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G  242 (386)
T PRK09082        163 RTRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTG  242 (386)
T ss_pred             cceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchh
Confidence            2677777522332  33   35666778999999999999998532221           0      12222 2    13


Q ss_pred             ---chhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCC
Q psy10669        176 ---EKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDV  250 (337)
Q Consensus       176 ---g~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~  250 (337)
                         |++++  ++.+.+.........+ ++.+...+++..+..- ....++.++...++.+++.+.|.+.|+++... ..+
T Consensus       243 ~RiG~iv~~~~l~~~~~~~~~~~~~~-~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~-~g~  319 (386)
T PRK09082        243 WKVGYCVAPAALSAEFRKVHQYNTFT-VNTPAQLALADYLRAE-PEHYLELPAFYQAKRDRFRAALANSRFKLLPC-EGT  319 (386)
T ss_pred             hhhhhhhCCHHHHHHHHHHHhhhcCC-CChHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC-Cee
Confidence               77765  4555444432111122 3333333333333321 23345667788899999999999988887542 335


Q ss_pred             eEEEEEecC-CCcchHHHHHHH-hhcCceeccC
Q psy10669        251 HLILIDLRK-NKLTGSKVELVL-EEIAIACNKN  281 (337)
Q Consensus       251 h~v~V~~~~-~~~~~~~~~~~L-~~~gI~v~~~  281 (337)
                      ..+++++.+ .+.+..++.+.| +++||.+.+-
T Consensus       320 ~~~~~~~~~~~~~~~~~~~~~l~~~~~v~v~pg  352 (386)
T PRK09082        320 YFQLVDYSAISDLDDVEFCQWLTREHGVAAIPL  352 (386)
T ss_pred             EEEEEeccccCCCCHHHHHHHHHHhCCEEEeCc
Confidence            567778764 355677887765 6789998763

>PRK06460 hypothetical protein; Provisional

Probab=98.82  E-value=8.8e-08  Score=93.92  Aligned_cols=153  Identities=15%  Similarity=0.142  Sum_probs=102.2

Q ss_pred             chHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc--------------------------------
Q psy10669         72 QFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT--------------------------------  119 (337)
Q Consensus        72 ~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~--------------------------------  119 (337)
                      ...+++|    +++++++|.++     ++.++||+.|+..++.+++++                                
T Consensus        45 p~~~~L~----~~lA~l~g~~~-----~v~~~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~  115 (376)
T PRK06460         45 PTVLELT----KKIVELENAEM-----GVAFSSGMGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDAS  115 (376)
T ss_pred             ccHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEE
Confidence            4456676    58899999975     688899999998888888654                                


Q ss_pred             ---------ccc--cccEEEEcCccc--ccccChHHHHHHhhhcCCeEEEeccccccccc--------eeeeec-c----
Q psy10669        120 ---------NNA--RFDFLSSGTTCY--SRCLDYARFRQICDETDSIMFADMSHISGLIA--------GVKGVT-K----  173 (337)
Q Consensus       120 ---------~~a--~pklII~~~S~~--~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~--------g~~~T~-~----  173 (337)
                               +..  ++|+|++...++  +...|.++|.++|+++|+++++|++|..++..        .++.+. |    
T Consensus       116 ~~~~~~~l~~~~~~~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivDea~~~~~~~~~l~~~~divv~S~sK~l~G  195 (376)
T PRK06460        116 NPGSDNIIEKAKSKRYDVVFVENITNPLLRVVDITELSKVCKENGSILIVDATFSTPINQKPLELGADIVVHSASKFLAG  195 (376)
T ss_pred             CCCCHHHHHHhcCCCceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcCccccCChhhcCCCEEEeecceeccC
Confidence                     111  267777763333  58999999999999999999999999876432        123332 2    


Q ss_pred             ----CCchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC
Q psy10669        174 ----TGEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR  239 (337)
Q Consensus       174 ----~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~  239 (337)
                          .+|+++.  ++.+.+.....+.  |....+..|.++  +..+  +..+.+++++.+|++++++.|++.
T Consensus       196 ~~~~~~G~~~~~~~l~~~l~~~~~~~--g~~~~~~~a~~~--l~~~--~~l~~r~~~~~~n~~~l~~~L~~~  261 (376)
T PRK06460        196 HNDVIAGLAAGYGKLLNVIDQMRRTL--GTSLDPHAAYLT--LRGI--KTLKIRMDVINRNAEQIAEFLEGH  261 (376)
T ss_pred             CCCceEEEEecCHHHHHHHHHHHHhc--CCCCCHHHHHHH--Hhch--hhHHHHHHHHHHHHHHHHHHHHcC
Confidence                1466655  5666665433332  222223222221  2121  234678899999999999999984

>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional

Probab=98.81  E-value=6.2e-08  Score=95.88  Aligned_cols=158  Identities=15%  Similarity=0.122  Sum_probs=108.6

Q ss_pred             ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669         70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------  119 (337)
Q Consensus        70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------  119 (337)
                      |+...+++|    +++++++|.++     ++.+.||+.|+..++.+++++                              
T Consensus        68 ~~p~~~~le----~~lA~l~g~~~-----al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~  138 (403)
T PRK07810         68 GNPTVSMFE----ERLRLIEGAEA-----CFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPRWGVETV  138 (403)
T ss_pred             CCchHHHHH----HHHHHHhCCCc-----EEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHHHcCcEEE
Confidence            556678888    58899999886     799999999998888888654                              


Q ss_pred             ----------ccc---cccEEEEc-Ccc-cccccChHHHHHHhhhcCCeEEEeccccccccc-----e---e-eeecc--
Q psy10669        120 ----------NNA---RFDFLSSG-TTC-YSRCLDYARFRQICDETDSIMFADMSHISGLIA-----G---V-KGVTK--  173 (337)
Q Consensus       120 ----------~~a---~pklII~~-~S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----g---~-~~T~~--  173 (337)
                                +.+   ++|+|++. +++ .+...|+++|.++|+++|++++||++|..|+..     |   + .|.+|  
T Consensus       139 ~vd~~d~~~l~~ai~~~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD~a~a~~~~~~~~~~gaDivv~S~tK~l  218 (403)
T PRK07810        139 FVDGEDLSQWEEALSVPTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLDNVFATPLLQRGLPLGADVVVYSGTKHI  218 (403)
T ss_pred             EECCCCHHHHHHhcCcCceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCCccccCChhhcCCcEEEccCCcee
Confidence                      111   26788775 333 357789999999999999999999999988764     1   2 22222  


Q ss_pred             ------CCchhhh--h-HHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCE
Q psy10669        174 ------TGEKILY--D-YEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYH  242 (337)
Q Consensus       174 ------~Gg~i~~--~-l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~  242 (337)
                            .||++++  + +.+.+.....  ..|....+..|+++..  .+  .....+.++-.+|+.++++.|.+. ++.
T Consensus       219 ~g~g~~~gG~v~~~~~~~~~~l~~~~~--~~g~~~s~~~a~l~l~--~L--~tl~~R~~~~~~~a~~~a~~L~~~p~v~  291 (403)
T PRK07810        219 DGQGRVLGGAILGDREYIDGPVQKLMR--HTGPALSAFNAWVLLK--GL--ETLALRVRHSNASALRIAEFLEGHPAVR  291 (403)
T ss_pred             cCCcCceeEEEEeChHHHHHHHHHHHH--HhCCCCCHHHHHHHHh--cc--CcHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence                  1677765  2 3333432211  1334445555554332  33  245788999999999999999873 443

>PRK06234 methionine gamma-lyase; Provisional

Probab=98.81  E-value=1.1e-07  Score=93.93  Aligned_cols=157  Identities=15%  Similarity=0.119  Sum_probs=108.0

Q ss_pred             ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669         70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------  119 (337)
Q Consensus        70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------  119 (337)
                      ++....+||    +++++++|.++     .+.+.||+.|+..++.+++++                              
T Consensus        62 ~~p~~~~Le----~~iA~~~g~~~-----~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~  132 (400)
T PRK06234         62 GNPTSTEVE----NKLALLEGGEA-----AVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTRYGVEVT  132 (400)
T ss_pred             CCccHHHHH----HHHHHHhCCCc-----EEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHhhCCeEEE
Confidence            556677888    58899999875     688999999998888888754                              


Q ss_pred             --------cc--c---cccEEEEc-Ccc-cccccChHHHHHHhhhc--CCeEEEeccccccccc-----e---e-eeecc
Q psy10669        120 --------NN--A---RFDFLSSG-TTC-YSRCLDYARFRQICDET--DSIMFADMSHISGLIA-----G---V-KGVTK  173 (337)
Q Consensus       120 --------~~--a---~pklII~~-~S~-~~~~~d~~~l~eia~~~--ga~l~vD~AH~~Gli~-----g---~-~~T~~  173 (337)
                              ++  +   ++|+|++. +++ .+...|+++|.++|+++  |+++++|++|..+...     +   + .|..|
T Consensus       133 ~vd~~d~e~l~~~i~~~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livDea~~~~~~~~~l~~g~Divv~S~sK  212 (400)
T PRK06234        133 FVDTSNLEEVRNALKANTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVDNTFCTPYIQRPLQLGADVVVHSATK  212 (400)
T ss_pred             EECCCCHHHHHHHhccCCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEECCCCchhcCCchhhCCcEEEeeccc
Confidence                    01  1   26888876 333 35788999999999997  9999999999988654     1   2 22222


Q ss_pred             --------CCchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC
Q psy10669        174 --------TGEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR  239 (337)
Q Consensus       174 --------~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~  239 (337)
                              .||++++  ++.+.+.........|+...+..+++...  .+  .....+.++..+|++++++.|.+.
T Consensus       213 ~l~g~g~~~gG~v~~~~~~~~~l~~~~~~~~~g~~l~p~~a~l~~~--~l--~tl~~r~~~~~~na~~~a~~L~~~  284 (400)
T PRK06234        213 YLNGHGDVIAGFVVGKEEFINQVKLFGIKDMTGSVIGPFEAFLIIR--GM--KTLQIRMEKHCKNAMKVAKFLESH  284 (400)
T ss_pred             cccCCCCceeEEEEecHHHHHHHHHHHHHHhcCCCCCHHHHHHHHh--cc--CcHHHHHHHHHHHHHHHHHHHHcC
Confidence                    1577765  46555543212233445555555554432  33  235678888899999999999873

>PRK07503 methionine gamma-lyase; Provisional

Probab=98.80  E-value=1e-07  Score=94.33  Aligned_cols=157  Identities=16%  Similarity=0.103  Sum_probs=106.1

Q ss_pred             ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669         70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------  119 (337)
Q Consensus        70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------  119 (337)
                      ++....++|    +++++++|+++     ++.++||+.|+..++.+++++                              
T Consensus        63 ~~p~~~~le----~~lA~l~g~~~-----~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~  133 (403)
T PRK07503         63 SNPTLALLE----QRMASLEGGEA-----AVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVR  133 (403)
T ss_pred             CCchHHHHH----HHHHHHhCCCc-----EEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhhCCEEEE
Confidence            445667787    57899999986     688999999988777788654                              


Q ss_pred             ----------ccc---cccEEEEc-Ccc-cccccChHHHHHHhhhcCCeEEEeccccccccc-----e---ee-eecc--
Q psy10669        120 ----------NNA---RFDFLSSG-TTC-YSRCLDYARFRQICDETDSIMFADMSHISGLIA-----G---VK-GVTK--  173 (337)
Q Consensus       120 ----------~~a---~pklII~~-~S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----g---~~-~T~~--  173 (337)
                                +.+   ++|+|++. .++ .+...|+++|.++|+++|+++++|++|..+...     +   ++ |.+|  
T Consensus       134 ~vd~~d~~~l~~~i~~~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~g~Di~v~S~tK~l  213 (403)
T PRK07503        134 HVDLTDPAALKAAISDKTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVDNTYCTPYLQRPLELGADLVVHSATKYL  213 (403)
T ss_pred             EeCCCCHHHHHHhcCccCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCCEEEccccccc
Confidence                      101   26888875 322 358889999999999999999999999877543     1   22 2222  


Q ss_pred             ------CCchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC
Q psy10669        174 ------TGEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR  239 (337)
Q Consensus       174 ------~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~  239 (337)
                            .||+++.  ++.+++.........|....+.-|++...  .+  .....+.++..+|++.+++.|.+.
T Consensus       214 ~g~gd~~gG~v~~~~~l~~~l~~~~~~~~~g~~~s~~~a~l~l~--~L--~tl~~r~~~~~~na~~~a~~L~~~  283 (403)
T PRK07503        214 GGHGDITAGLVVGGKALADRIRLEGLKDMTGAVMSPFDAFLLMR--GL--KTLALRMDRHCASAQAVAEWLARH  283 (403)
T ss_pred             cCCCceeEEEEEcCHHHHHHHHhhhHHhCcCCCCCHHHHHHHHc--Cc--chHHHHHHHHHHHHHHHHHHHHhC
Confidence                  2566655  46565543212233444455555554432  33  234567777789999999999984

>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase

Probab=98.79  E-value=5.9e-07  Score=88.13  Aligned_cols=214  Identities=13%  Similarity=0.094  Sum_probs=127.2

Q ss_pred             CCHHHHHHHhhhhhhccCCCCCCCcCcCc-cchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhh-CCc
Q psy10669         42 TSLAVLECLGSCLQNKYSEGLPGKRYYGG-NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKA-LPT  119 (337)
Q Consensus        42 ~~p~V~~a~~~~l~~~y~~g~~g~r~~~G-~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aL-l~~  119 (337)
                      +++..++++...+....         +.| .....++|    +.+++++|.++     .+...||+.|...++.++ +++
T Consensus         9 ~~~~e~~a~~~~~~~~~---------~~~~g~~~~~~e----~~la~~~g~~~-----~v~~~sgt~aL~~~l~al~~~p   70 (376)
T TIGR02379         9 VTGQELEYIAEAISEGK---------LSGDGPFSRRCE----TWLENRTGTKK-----ALLTPSCTAALEMAALLLDIQP   70 (376)
T ss_pred             CCHHHHHHHHHHHHcCC---------ccCCcHHHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHHHcCCCC
Confidence            45666777766544321         222 24456777    46778889875     466667788866656666 443


Q ss_pred             ------------------------------------------ccc---cccEEEEcCcccccccChHHHHHHhhhcCCeE
Q psy10669        120 ------------------------------------------NNA---RFDFLSSGTTCYSRCLDYARFRQICDETDSIM  154 (337)
Q Consensus       120 ------------------------------------------~~a---~pklII~~~S~~~~~~d~~~l~eia~~~ga~l  154 (337)
                                                                +.+   ++|+|+..+ .++...|+++|.++|+++|+++
T Consensus        71 Gd~Viv~~~t~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~~tk~Iip~~-~~G~~~d~~~I~~la~~~~i~v  149 (376)
T TIGR02379        71 GDEVIMPSYTFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITHRTKAIVPVH-YAGVACDMDTIMALANKHQLFV  149 (376)
T ss_pred             cCEEEECCCCcHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCcCceEEEEeC-CCCCccCHHHHHHHHHHCCCEE
Confidence                                                      111   268888764 5689999999999999999999


Q ss_pred             EEeccccccc-cc----------eeee--------eccCCchhhh---hHHHHHhhccCCC------------------C
Q psy10669        155 FADMSHISGL-IA----------GVKG--------VTKTGEKILY---DYEEKINNAVFPS------------------L  194 (337)
Q Consensus       155 ~vD~AH~~Gl-i~----------g~~~--------T~~~Gg~i~~---~l~~~i~~~~~p~------------------~  194 (337)
                      +.|++|+.|. +.          +..|        +++.||++++   ++.+++.....-+                  .
T Consensus       150 IeDaa~~~g~~~~~~~~g~~~~~~~fSf~~~K~l~~g~~gG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  229 (376)
T TIGR02379       150 IEDAAQGVMSTYKGRALGSIGHLGTFSFHETKNYTSGGEGGALLINDQAFIERAEIIREKGTNRSQFFRGEVDKYTWRDI  229 (376)
T ss_pred             EEECccccCCccCCcccCCCCCEEEEeCCCCCcCcccCCceEEEECCHHHHHHHHHHHHhCCCCccccccCCCcceeeee
Confidence            9999999875 32          1112        1235787765   3555433211000                  1


Q ss_pred             CCCCcHHHH-HHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC---C-CEEec--CC--CCCeEEEEEecCCCcchH
Q psy10669        195 QGGPHNHAI-GAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR---G-YHVVT--GG--TDVHLILIDLRKNKLTGS  265 (337)
Q Consensus       195 ~g~~~~~~i-aala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~---G-~~v~~--~~--t~~h~v~V~~~~~~~~~~  265 (337)
                      ..+..+..+ |++..+  ++  ...++..++-.++++...+.|.+.   + ..+..  .+  ...|+.++.+... .+-.
T Consensus       230 g~n~~~~~~~Aa~g~~--qL--~~l~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~r~  304 (376)
T TIGR02379       230 GSSYLPSELQAAYLWA--QL--EQADRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNAHMFYIKLKDE-DDRN  304 (376)
T ss_pred             cccCCccHHHHHHHHH--HH--HHhHHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeeeEEEEEEECCc-CCHH
Confidence            111112222 333322  22  234566677777888888887653   2 22221  11  1236777777543 4678


Q ss_pred             HHHHHHhhcCceec
Q psy10669        266 KVELVLEEIAIACN  279 (337)
Q Consensus       266 ~~~~~L~~~gI~v~  279 (337)
                      ++.+.|.+.||.++
T Consensus       305 ~l~~~L~~~gI~~~  318 (376)
T TIGR02379       305 ELIKYLKEQEIMAV  318 (376)
T ss_pred             HHHHHHHHCCCCcc
Confidence            88899999999876

This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).

>PRK08249 cystathionine gamma-synthase; Provisional

Probab=98.78  E-value=1.2e-07  Score=93.67  Aligned_cols=155  Identities=13%  Similarity=0.080  Sum_probs=105.9

Q ss_pred             ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669         70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------  119 (337)
Q Consensus        70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------  119 (337)
                      ++...+++|    +++++++|.++     ++.++||+.|+..++.+++++                              
T Consensus        62 ~~p~~~~le----~~lA~l~g~~~-----~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~  132 (398)
T PRK08249         62 TNPTVQAFE----EKVRILEGAEA-----ATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVT  132 (398)
T ss_pred             CChHHHHHH----HHHHHHhCCCe-----EEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCeEEE
Confidence            556667887    58899999875     699999999998888888654                              


Q ss_pred             ----------ccc---cccEEEEc-Ccc-cccccChHHHHHHhhhcCCeEEEeccccccccc--------eeeeec-c--
Q psy10669        120 ----------NNA---RFDFLSSG-TTC-YSRCLDYARFRQICDETDSIMFADMSHISGLIA--------GVKGVT-K--  173 (337)
Q Consensus       120 ----------~~a---~pklII~~-~S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~--------g~~~T~-~--  173 (337)
                                +.+   ++|+|++. +++ .+...|+++|.++|+++|+++++|++|..++..        .++++. |  
T Consensus       133 ~vd~~d~e~l~~~i~~~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD~t~a~~~~~~~l~~~~Divv~S~sK~l  212 (398)
T PRK08249        133 LCETGDHEQIEAEIAKGCDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVDNTFATPINQNPLALGADLVIHSATKFL  212 (398)
T ss_pred             EcCCCCHHHHHHhcCCCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCcCccccCCchhhCCCEEeccCceec
Confidence                      101   26888874 433 358899999999999999999999999987643        122222 2  


Q ss_pred             ------CCchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC
Q psy10669        174 ------TGEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR  239 (337)
Q Consensus       174 ------~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~  239 (337)
                            .||+++.  ++.+++.....  ..|+...+..++++..  .+  .....+.++..+|++.+++.|.+.
T Consensus       213 ~g~~~~~gG~vv~~~~l~~~l~~~~~--~~g~~~s~~~a~l~l~--~l--~tL~~R~~~~~~na~~la~~L~~~  280 (398)
T PRK08249        213 SGHADALGGVVCGSKELMEQVYHYRE--INGATMDPMSAYLILR--GM--KTLKLRVRQQQESAMALAKYLQTH  280 (398)
T ss_pred             CCCCCceEEEEECCHHHHHHHHHHHH--hcCCCCCHHHHHHHHh--Cc--chHHHHHHHHHHHHHHHHHHHHcC
Confidence                  1466655  45555543211  1334444545544332  22  234577888899999999999983

>PRK03317 histidinol-phosphate aminotransferase; Provisional

Probab=98.78  E-value=2.2e-06  Score=83.40  Aligned_cols=232  Identities=16%  Similarity=0.105  Sum_probs=140.8

Q ss_pred             cceeeeccCCCC--CHHHHHHHhhhhhhc--cCCCCCCCcCcCccchHHHHHHHHHHHHHhhc----C--CCCCCCccee
Q psy10669         31 NGIELIASENFT--SLAVLECLGSCLQNK--YSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAF----N--LDPEQWGCNV  100 (337)
Q Consensus        31 ~~i~l~asen~~--~p~V~~a~~~~l~~~--y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lf----g--~~~~~~~~~v  100 (337)
                      ..|.|-..+|..  +|.+++++...+...  ...+||.    .|   ..++.    +.+++++    |  .+.    .+|
T Consensus        27 ~~i~l~~~~~~~~~~~~~~~al~~~l~~~~~~~~~Y~~----~g---~~~lr----~aia~~~~~~~~~~~~~----~~I   91 (368)
T PRK03317         27 VPVRLNTNENPYPPSPALVADIAEAVAEAAAGLNRYPD----RD---AVALR----ADLAAYLTAQTGVGLTV----ENV   91 (368)
T ss_pred             ceeEecCCCCCCCCCHHHHHHHHHHHhhhhhhhccCCC----Cc---hHHHH----HHHHHHhhhhccCCCCh----hhE
Confidence            346777777765  888999987654321  0112221    11   22333    3444555    4  333    368


Q ss_pred             ecCCCc-hhHHHHHHhhCCc-----------------------------------------cc----ccccEEEEcCccc
Q psy10669        101 QPYSGS-PANFAVCEKALPT-----------------------------------------NN----ARFDFLSSGTTCY  134 (337)
Q Consensus       101 ~~~Sgt-~AN~~v~~aLl~~-----------------------------------------~~----a~pklII~~~S~~  134 (337)
                      ..++|+ ++...++.+++++                                         +.    .++|+|++..-.+
T Consensus        92 ~it~G~~~~l~~~~~~~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~i~l~~p~N  171 (368)
T PRK03317         92 WAANGSNEILQQLLQAFGGPGRTALGFVPSYSMHPIIARGTHTEWVEGPRAADFTLDVDAAVAAIAEHRPDVVFLTSPNN  171 (368)
T ss_pred             EECCCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHhcCCeeEEcccCCCCCCCHHHHHHHHhccCCCEEEEeCCCC
Confidence            888995 6777777887653                                         00    1267766652233


Q ss_pred             --ccccChHHHHHHhhhcCCeEEEeccccc----cccc-----------eeeeec-c----CC---chhhh--hHHHHHh
Q psy10669        135 --SRCLDYARFRQICDETDSIMFADMSHIS----GLIA-----------GVKGVT-K----TG---EKILY--DYEEKIN  187 (337)
Q Consensus       135 --~~~~d~~~l~eia~~~ga~l~vD~AH~~----Gli~-----------g~~~T~-~----~G---g~i~~--~l~~~i~  187 (337)
                        +...+.+++++|++..+++|++|++|.-    |...           .+..|. |    .|   |++++  ++.+.+.
T Consensus       172 PtG~~~~~~~l~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~~~~~~~l~  251 (368)
T PRK03317        172 PTGTALPLDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAAPAVVDALR  251 (368)
T ss_pred             CCCCCCCHHHHHHHHHHCCceEEEeCCchhhcccCCcCHHHHHHhCCCEEEEEechhhhccchhhhhhhhCCHHHHHHHH
Confidence              6888899999999999999999999972    2111           122233 2    24   66665  5767666


Q ss_pred             hccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEE-EecCCCcchHH
Q psy10669        188 NAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILI-DLRKNKLTGSK  266 (337)
Q Consensus       188 ~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V-~~~~~~~~~~~  266 (337)
                      ....+.   +.+....++...++...  ..+.+.++++.++.+.+.+.|.+.|+.+..  ++...+++ ++.    +..+
T Consensus       252 ~~~~~~---~~s~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~--~~~~~~~~~~~~----~~~~  320 (368)
T PRK03317        252 LVRLPY---HLSAVTQAAARAALRHA--DELLASVAALRAERDRVVAWLRELGLRVAP--SDANFVLFGRFA----DRHA  320 (368)
T ss_pred             hcCCCC---CCCHHHHHHHHHHhhCH--HHHHHHHHHHHHHHHHHHHHHHHCCCEeCC--CCCcEEEEeccC----CHHH
Confidence            543332   23344454444555432  345566777888888899999999988754  33343333 332    4677


Q ss_pred             HHHHHhhcCceeccCc---ccchhh
Q psy10669        267 VELVLEEIAIACNKNT---GISLAA  288 (337)
Q Consensus       267 ~~~~L~~~gI~v~~~~---girig~  288 (337)
                      +.+.|.+.||.+....   .+||+.
T Consensus       321 ~~~~l~~~Gv~v~~~~~~~~iRi~~  345 (368)
T PRK03317        321 VWQGLLDRGVLIRDVGIPGWLRVTI  345 (368)
T ss_pred             HHHHHHHCCEEEEeCCCCCeEEEec
Confidence            8888888999997533   678764

>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase

Probab=98.77  E-value=5.6e-06  Score=80.87  Aligned_cols=243  Identities=14%  Similarity=0.116  Sum_probs=136.5

Q ss_pred             hcccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC
Q psy10669         28 RQINGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG  105 (337)
Q Consensus        28 rq~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg  105 (337)
                      .+.+.+.|-..++-.  ++.+.+++...+.+....+|+-   ..|   ..++-....+.+.+.+|.+.+.- .+|.+++|
T Consensus        27 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G---~~~lr~~ia~~~~~~~~~~~~~~-~~vi~t~G   99 (383)
T TIGR03540        27 EGVDVISLGIGDPDLPTPKHIVEALCKAAENPENHRYPS---YEG---MLAYRQAVADWYKRRFGVELDPE-TEVLSLIG   99 (383)
T ss_pred             cCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC---CCC---CHHHHHHHHHHHHHhhCCCCCCC-CeEEECCC
Confidence            344556666655553  7788888876543211111111   122   22332222223334445431100 14778777


Q ss_pred             -chhHHHHHHhhCCc-----------------------------------------cc----c-cccEEEEcCccc--cc
Q psy10669        106 -SPANFAVCEKALPT-----------------------------------------NN----A-RFDFLSSGTTCY--SR  136 (337)
Q Consensus       106 -t~AN~~v~~aLl~~-----------------------------------------~~----a-~pklII~~~S~~--~~  136 (337)
                       +++...++.+++++                                         ++    . ++|+|++..-.+  +.
T Consensus       100 ~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~i~~P~NPtG~  179 (383)
T TIGR03540       100 SKEGIAHIPLAFVNPGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIAKKAKLMFINYPNNPTGA  179 (383)
T ss_pred             cHHHHHHHHHHhCCCCCEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhccccceEEEEeCCCCCcCc
Confidence             56766677787654                                         00    1 278787762234  47


Q ss_pred             ccCh---HHHHHHhhhcCCeEEEeccccccccc----------------ee-eeec-c----CC---chhhh--hHHHHH
Q psy10669        137 CLDY---ARFRQICDETDSIMFADMSHISGLIA----------------GV-KGVT-K----TG---EKILY--DYEEKI  186 (337)
Q Consensus       137 ~~d~---~~l~eia~~~ga~l~vD~AH~~Gli~----------------g~-~~T~-~----~G---g~i~~--~l~~~i  186 (337)
                      ..+.   ++|.++|+++|+++++|+++.--...                .+ ..|. |    .|   |+++.  ++.+.+
T Consensus       180 ~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~~~~l~~~~  259 (383)
T TIGR03540       180 VAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVGNADLIAGL  259 (383)
T ss_pred             cCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCccceeeEEeCCHHHHHHH
Confidence            7774   55667889999999999998521110                01 2222 2    23   66655  566655


Q ss_pred             hhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHH
Q psy10669        187 NNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSK  266 (337)
Q Consensus       187 ~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~  266 (337)
                      ..... ....+++.+...++..++... ....++.++++.++.+.+.+.|++.|+.+... ..+..+++.+.+ +++..+
T Consensus       260 ~~~~~-~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~-~~~~~~~~~l~~-~~~~~~  335 (383)
T TIGR03540       260 GKVKT-NVDSGVFQAIQYAAIAALNGP-QDVVKEIRKIYQRRRDLLLEALKKIGIDVEKP-KATFYVWVPVPE-GYTSAE  335 (383)
T ss_pred             HHHHH-hcccCCChHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHhCCCEecCC-CcceEEEEECCC-CCCHHH
Confidence            54321 122233444444444444332 22335667888899999999999999887642 235557787754 556777


Q ss_pred             HHHHH-hhcCceeccC
Q psy10669        267 VELVL-EEIAIACNKN  281 (337)
Q Consensus       267 ~~~~L-~~~gI~v~~~  281 (337)
                      +.+.| ++.||.+.+-
T Consensus       336 ~~~~ll~~~gi~v~~g  351 (383)
T TIGR03540       336 FAARLLEETGVVVTPG  351 (383)
T ss_pred             HHHHHHHHCCEEEecc
Confidence            77665 6789998863

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.

>PRK08361 aspartate aminotransferase; Provisional

Probab=98.76  E-value=3.5e-06  Score=82.64  Aligned_cols=238  Identities=14%  Similarity=0.101  Sum_probs=132.3

Q ss_pred             ccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCC--CCCCCcceeecCCC
Q psy10669         30 INGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNL--DPEQWGCNVQPYSG  105 (337)
Q Consensus        30 ~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~--~~~~~~~~v~~~Sg  105 (337)
                      .+-|+|-..++-.  ++.+++++...+....       ..|....-..+++....+.+.+.+|.  +.    -+|.+++|
T Consensus        33 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~-------~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~----~~i~~t~G  101 (391)
T PRK08361         33 ENVISLGIGEPDFDTPKNIKEAAKRALDEGW-------THYTPNAGIPELREAIAEYYKKFYGVDVDV----DNVIVTAG  101 (391)
T ss_pred             cCeEEcCCCCCCCCCCHHHHHHHHHHHhcCC-------CCCCCCCCcHHHHHHHHHHHHHHhCCCCCc----ccEEEeCC
Confidence            4457777666655  5788888776543211       11222222344543333344444453  33    25777777


Q ss_pred             -chhHHHHHHhhCCc--------------------------------c---------c--c---cccEEEEc-Ccc-ccc
Q psy10669        106 -SPANFAVCEKALPT--------------------------------N---------N--A---RFDFLSSG-TTC-YSR  136 (337)
Q Consensus       106 -t~AN~~v~~aLl~~--------------------------------~---------~--a---~pklII~~-~S~-~~~  136 (337)
                       ++|+..++.+++++                                +         +  +   ++++|++. +++ .+.
T Consensus       102 ~~~al~~~~~~l~~~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~i~~p~NPtG~  181 (391)
T PRK08361        102 AYEATYLAFESLLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDELLELITKRTRMIVINYPNNPTGA  181 (391)
T ss_pred             hHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcccccEEEEEeCCCCCCCc
Confidence             67888778888654                                0         0  0   15666665 333 357


Q ss_pred             ccC---hHHHHHHhhhcCCeEEEeccccccccc---------------eeeeec-c----CC---chhhh--hHHHHHhh
Q psy10669        137 CLD---YARFRQICDETDSIMFADMSHISGLIA---------------GVKGVT-K----TG---EKILY--DYEEKINN  188 (337)
Q Consensus       137 ~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~---------------g~~~T~-~----~G---g~i~~--~l~~~i~~  188 (337)
                      ..|   +++|.++|+++++++++|+++.-.+..               .+++|. |    .|   |+++.  ++.+.+..
T Consensus       182 ~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlRiG~~~~~~~~~~~~~~  261 (391)
T PRK08361        182 TLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMTGWRLGFVIAPEQVIKDMIK  261 (391)
T ss_pred             CcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEecCchhcCCcHhhhhhhccCHHHHHHHHH
Confidence            777   556677899999999999997532221               122332 2    13   66665  45554433


Q ss_pred             ccCCCCCCCCcHHHHHHHHHHHHHHhc-hhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCCCcchHH
Q psy10669        189 AVFPSLQGGPHNHAIGAIATAMLQAQS-DEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKNKLTGSK  266 (337)
Q Consensus       189 ~~~p~~~g~~~~~~iaala~a~~e~~~-~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~~~~~~~  266 (337)
                      . .+...++.+.....++..++.+-.. ...++.+++..++.+.+.+.|.+. |+.+... ..+-.+++.+...+++..+
T Consensus       262 ~-~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p-~g~~~~~~~l~~~~~~~~~  339 (391)
T PRK08361        262 L-HAYIIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKVFEP-KGAFYVFANIDETGMSSED  339 (391)
T ss_pred             H-HhhhccCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCC-CEEEEEEEECCCCCCCHHH
Confidence            2 1111223333333333333322100 113566777788888888999885 7776542 2244577777655567777


Q ss_pred             HHHHHh-hcCceecc
Q psy10669        267 VELVLE-EIAIACNK  280 (337)
Q Consensus       267 ~~~~L~-~~gI~v~~  280 (337)
                      +...|. ++||.+.+
T Consensus       340 l~~~l~~~~gv~v~p  354 (391)
T PRK08361        340 FAEWLLEKARVVVIP  354 (391)
T ss_pred             HHHHHHHhCCEEEcC
Confidence            777664 58999876

>PRK03158 histidinol-phosphate aminotransferase; Provisional

Probab=98.75  E-value=2.2e-06  Score=82.92  Aligned_cols=224  Identities=14%  Similarity=0.081  Sum_probs=135.7

Q ss_pred             cceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCc-h
Q psy10669         31 NGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGS-P  107 (337)
Q Consensus        31 ~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt-~  107 (337)
                      ..|.|-..+|..  +|.|++++...+.. .. .+|..       ...++    ++.++++++.+.    -+|.+++|+ +
T Consensus        30 ~~i~l~~n~~~~~~~~~v~~a~~~~~~~-~~-~~p~~-------g~~~l----r~~ia~~~~~~~----~~i~~t~G~~~   92 (359)
T PRK03158         30 KIVKLASNENPYGPSPKVKEAIAAHLDE-LA-LYPDG-------YAPEL----RTKVAKHLGVDE----EQLLFGAGLDE   92 (359)
T ss_pred             ceEEecCCCCCCCCCHHHHHHHHHHHHH-hh-cCCCC-------cHHHH----HHHHHHHhCCCH----HHEEECCCHHH
Confidence            345665555544  88899988764332 11 11111       12333    457788888865    368888885 5


Q ss_pred             hHHHHHHhhCCc----------------------------------------ccc---cccEEEEc-Ccc-cccccChHH
Q psy10669        108 ANFAVCEKALPT----------------------------------------NNA---RFDFLSSG-TTC-YSRCLDYAR  142 (337)
Q Consensus       108 AN~~v~~aLl~~----------------------------------------~~a---~pklII~~-~S~-~~~~~d~~~  142 (337)
                      +...++.+++++                                        +.+   ++++|++. +.+ -+...+.++
T Consensus        93 ~l~~~~~~~~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~  172 (359)
T PRK03158         93 VIQMISRALLNPGTNTVMAEPTFSQYRHNAIIEGAEVREVPLKDGGHDLEAMLKAIDEQTKIVWICNPNNPTGTYVNHEE  172 (359)
T ss_pred             HHHHHHHHHhCCCCEEEEcCCCHHHHHHHHHHcCCeEEEEecCCCCcCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHHH
Confidence            655556677543                                        001   25776654 433 358888999


Q ss_pred             HHHHhhh--cCCeEEEeccccccccc----------------eeeeec-c----CC---chhhh--hHHHHHhhccCCCC
Q psy10669        143 FRQICDE--TDSIMFADMSHISGLIA----------------GVKGVT-K----TG---EKILY--DYEEKINNAVFPSL  194 (337)
Q Consensus       143 l~eia~~--~ga~l~vD~AH~~Gli~----------------g~~~T~-~----~G---g~i~~--~l~~~i~~~~~p~~  194 (337)
                      +.++++.  +|+++++|++|.-....                .+..|. |    .|   |+++.  ++.+.+.....+  
T Consensus       173 l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~~~~~~~~~~~--  250 (359)
T PRK03158        173 LLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIASEELIEKLNIARPP--  250 (359)
T ss_pred             HHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCCHHHHHHHHHhcCC--
Confidence            9998877  49999999998542221                112332 2    23   77765  566766655333  


Q ss_pred             CCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhc
Q psy10669        195 QGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEI  274 (337)
Q Consensus       195 ~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~  274 (337)
                      . +.+....+++..++..  ....++++++..++.+.+.+.|.+.|+.+..  ++...+++++.   .+..++.+.|.+.
T Consensus       251 ~-~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~g~~i~~~~~---~~~~~~~~~l~~~  322 (359)
T PRK03158        251 F-NTTRIAQYAAIAALED--QAFLKECVEKNAEGLEQYYAFCKEYGLFYYP--SQTNFIFVDTG---RDANELFEALLKK  322 (359)
T ss_pred             C-CCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCeeCC--CcCcEEEEECC---CCHHHHHHHHHHC
Confidence            2 2344444444444432  1123455666777777888888888888765  33445677764   2567778888888


Q ss_pred             CceeccC
Q psy10669        275 AIACNKN  281 (337)
Q Consensus       275 gI~v~~~  281 (337)
                      ||.+.+.
T Consensus       323 gv~v~~g  329 (359)
T PRK03158        323 GYIVRSG  329 (359)
T ss_pred             CeEEeeC
Confidence            9999874

>PRK14807 histidinol-phosphate aminotransferase; Provisional

Probab=98.75  E-value=1.9e-06  Score=83.42  Aligned_cols=222  Identities=13%  Similarity=0.105  Sum_probs=134.0

Q ss_pred             cceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCc-h
Q psy10669         31 NGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGS-P  107 (337)
Q Consensus        31 ~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt-~  107 (337)
                      ..+.|-..+|-.  |+.+.+++...+...    .. .+ |... ...++    |+.++++++.+.    .+|.+++|+ +
T Consensus        23 ~~~~l~~~~~~~~~p~~~~~a~~~~~~~~----~~-~~-y~~~-~~~~l----r~~ia~~~~~~~----~~i~it~G~~~   87 (351)
T PRK14807         23 YKYKMDANETPFELPEEVIKNIQEIVKSS----QV-NI-YPDP-TAEKL----REELARYCSVVP----TNIFVGNGSDE   87 (351)
T ss_pred             ceeEccCCCCCCCCCHHHHHHHHHHhhcC----cc-cC-CCCc-cHHHH----HHHHHHHhCCCc----ccEEEecCHHH
Confidence            345555555543  799999986543211    11 11 2211 12333    467788999875    368888995 5


Q ss_pred             hHHHHHHhhCCc-----------------------------------------cc---c-cccEEEEc-Ccc-cccccCh
Q psy10669        108 ANFAVCEKALPT-----------------------------------------NN---A-RFDFLSSG-TTC-YSRCLDY  140 (337)
Q Consensus       108 AN~~v~~aLl~~-----------------------------------------~~---a-~pklII~~-~S~-~~~~~d~  140 (337)
                      +...++.+++++                                         +.   . ++|+|++. +++ .+...|.
T Consensus        88 ~l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~k~v~l~~p~NPtG~~~~~  167 (351)
T PRK14807         88 IIHLIMLAFINKGDVVIYPHPSFAMYSVYSKIAGAVEIPVKLKEDYTYDVGSFIKVIEKYQPKLVFLCNPNNPTGSVIER  167 (351)
T ss_pred             HHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCH
Confidence            666666777654                                         00   1 26777765 332 3588999


Q ss_pred             HHHHHHhhhcCCeEEEeccccccccc-------------eeeeec-c----CC---chhhh--hHHHHHhhccCCCCCCC
Q psy10669        141 ARFRQICDETDSIMFADMSHISGLIA-------------GVKGVT-K----TG---EKILY--DYEEKINNAVFPSLQGG  197 (337)
Q Consensus       141 ~~l~eia~~~ga~l~vD~AH~~Gli~-------------g~~~T~-~----~G---g~i~~--~l~~~i~~~~~p~~~g~  197 (337)
                      +++.++|++++.++++|++|. .+.+             .+.++. |    .|   |+++.  ++.+.+.....+.   +
T Consensus       168 ~~l~~l~~~~~~~~ivDe~y~-~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~~~~~~~~~~~~~~---~  243 (351)
T PRK14807        168 EDIIKIIEKSRGIVVVDEAYF-EFYGNTIVDVINEFENLIVLRTLSKAFGLAGLRVGYAVANENILKYLNLVKSPY---N  243 (351)
T ss_pred             HHHHHHHHhCCCEEEEeCcch-hhcccchHHHhhhCCCEEEEecchHhcccchhceeeeecCHHHHHHHHHccCCC---C
Confidence            999999999889999999984 2222             122332 2    12   66665  5666665433332   2


Q ss_pred             CcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-CCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCc
Q psy10669        198 PHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-RGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAI  276 (337)
Q Consensus       198 ~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI  276 (337)
                      .+.....++...+.   ...+++..+++.++.+.+.+.|.+ .|+.+..  .+...+++.+.    +..++.+.|.+.||
T Consensus       244 ~~~~~q~~~~~~l~---~~~~~~~~~~~~~~r~~l~~~l~~~~g~~~~~--~~~~~~~i~~~----~~~~~~~~l~~~gV  314 (351)
T PRK14807        244 INSLSQVIALKVLR---TGVLKERVNYILNERERLIKELSKIPGIKVYP--SKTNFILVKFK----DADYVYQGLLERGI  314 (351)
T ss_pred             cCHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHHhCCCcEECc--CCccEEEEEcC----CHHHHHHHHHHCCE
Confidence            22333333333332   234566677788888889899877 4887654  33445667764    35677888888899


Q ss_pred             eecc
Q psy10669        277 ACNK  280 (337)
Q Consensus       277 ~v~~  280 (337)
                      .+..
T Consensus       315 ~v~~  318 (351)
T PRK14807        315 LVRD  318 (351)
T ss_pred             EEEE
Confidence            9864

>PRK12566 glycine dehydrogenase; Provisional

Probab=98.74  E-value=3.6e-07  Score=97.54  Aligned_cols=198  Identities=14%  Similarity=0.154  Sum_probs=122.2

Q ss_pred             HHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCC-------c------------------------------------
Q psy10669         83 QRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALP-------T------------------------------------  119 (337)
Q Consensus        83 ~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~-------~------------------------------------  119 (337)
                      +.+++++|.+.    +.+++.||+++++++++++-.       +                                    
T Consensus       550 ~~l~eLtGmd~----~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpasa~~~GieVv~Vp~D~~G~  625 (954)
T PRK12566        550 AWLCAITGFDA----ICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPASAQMAGMRVVIVECDPDGN  625 (954)
T ss_pred             HHHHHHHCCCe----EeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHHHHHHCCCEEEEeccCCCCC
Confidence            68899999998    689999999999988888621       0                                    


Q ss_pred             -------ccc---ccc--EEEEc-Ccccc-cccChHHHHHHhhhcCCeEEEeccccccccc-------e---eeee-cc-
Q psy10669        120 -------NNA---RFD--FLSSG-TTCYS-RCLDYARFRQICDETDSIMFADMSHISGLIA-------G---VKGV-TK-  173 (337)
Q Consensus       120 -------~~a---~pk--lII~~-~S~~~-~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-------g---~~~T-~~-  173 (337)
                             ++.   +++  .|+++ ++.++ ...|+++|.++|+++|++++||.||..|+++       |   +++. || 
T Consensus       626 iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~~l~~Pg~~GADi~~~s~HKt  705 (954)
T PRK12566        626 VDLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQVGLARPADIGADVSHMNLHKT  705 (954)
T ss_pred             cCHHHHHHHhhccCCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhccCCCChhhcCCCEEEecCCcc
Confidence                   111   133  34444 55555 5667999999999999999999999987776       1   3333 32 


Q ss_pred             ----C--Cchhhh------hHHHHHhhccCCCC--------CCCC-----cHHHHHHHHHHHHHHhchhhHHHHHHHHHH
Q psy10669        174 ----T--GEKILY------DYEEKINNAVFPSL--------QGGP-----HNHAIGAIATAMLQAQSDEFKSYQAQVKAN  228 (337)
Q Consensus       174 ----~--Gg~i~~------~l~~~i~~~~~p~~--------~g~~-----~~~~iaala~a~~e~~~~~~~~y~~~v~~n  228 (337)
                          .  ||..++      .+.+.+..  .|+.        .|+-     +...++-.+.....++-++.++-+++-+.|
T Consensus       706 f~~P~G~GGP~vG~iav~~~L~pfLp~--~P~~d~~G~~~r~ga~S~~~~gsa~~l~~A~~Yi~~lG~eLk~aa~~ailn  783 (954)
T PRK12566        706 FCIPHGGGGPGMGPIGVRAHLAPFVAN--HPVVPVEGPDPNNGAVSAAPWGSASILPISWMYIAMMGPQLADASEVAILS  783 (954)
T ss_pred             cCcCccCCCCccchhhhhhhhhhhccC--CCCcCCCCCCCCCCceeecccchHHHHHHHHHHHHHHCHHHHHHHHHHHHH
Confidence                2  344433      23333332  1210        1111     111223333333333323333444455779


Q ss_pred             HHHHHHHHHhCCCEEecCCC-CC--eEEEEEecC----CCcchHHHHHHHhhcCceeccCc-----ccchh
Q psy10669        229 ASHLSDEMIKRGYHVVTGGT-DV--HLILIDLRK----NKLTGSKVELVLEEIAIACNKNT-----GISLA  287 (337)
Q Consensus       229 a~~l~~~L~~~G~~v~~~~t-~~--h~v~V~~~~----~~~~~~~~~~~L~~~gI~v~~~~-----girig  287 (337)
                      ++|++++|.+ ++.+...+. ..  |-..+++..    .+.+..++.++|.++||.+.-..     ++||.
T Consensus       784 AnYla~rL~~-~~~v~~~~~~~~~~hEfii~~~~l~~~~g~~~~dvakRL~d~Gihapt~~fPv~~~LmIe  853 (954)
T PRK12566        784 ANYLANQLGG-AFPVLYRGRNERVAHECILDLRPLKAQTGISEEDVAKRLMDYGFHAPTMSFPVPGTLMVE  853 (954)
T ss_pred             HHHHHHHhHh-hCCCCcCCCCCCeeeEEEEEccccccccCCCHHHHHHHHHHCCcEEeEEeeccCCEEEEE
Confidence            9999999987 677665221 13  777777762    34677889999999899765321     56664

>PRK12414 putative aminotransferase; Provisional

Probab=98.74  E-value=3.5e-06  Score=82.61  Aligned_cols=257  Identities=14%  Similarity=0.169  Sum_probs=143.4

Q ss_pred             hhhhcHHHHHHHHHHHhhcccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhh
Q psy10669         11 LAQTDPELYSLIKKEKHRQINGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKA   88 (337)
Q Consensus        11 l~~~d~~~~~~~~~e~~rq~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~l   88 (337)
                      +...-+.+...+..- ..+...|+|-..++..  ++.+.+++...+...       ...|+...-..++.....+.++++
T Consensus        11 ~~~~~~~~~~~~~~~-~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~-------~~~Y~~~~G~~~lr~~ia~~l~~~   82 (384)
T PRK12414         11 LPDVGTTIFTVIGQL-AAQHDALNLSQGAPNFAPDPALVEGVARAMRDG-------HNQYAPMAGIAALREALAEKTERL   82 (384)
T ss_pred             cccCCccHHHHHHHH-HHhCCeEEcCCCCCCCCCCHHHHHHHHHHHHhC-------CCCcCCCCCcHHHHHHHHHHHHHH
Confidence            333444555555432 2344567777766655  788888887643321       112322222334444445677888


Q ss_pred             cCCCCCCCcceeecCCC-chhHHHHHHhhCCc-------------------------------------------ccc--
Q psy10669         89 FNLDPEQWGCNVQPYSG-SPANFAVCEKALPT-------------------------------------------NNA--  122 (337)
Q Consensus        89 fg~~~~~~~~~v~~~Sg-t~AN~~v~~aLl~~-------------------------------------------~~a--  122 (337)
                      +|.+.... .++..++| +++...++.+++.+                                           +..  
T Consensus        83 ~g~~~~~~-~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~  161 (384)
T PRK12414         83 YGARYDPA-SEVTVIASASEGLYAAISALVHPGDEVIYFEPSFDSYAPIVRLQGATPVAIKLSPEDFRVNWDEVAAAITP  161 (384)
T ss_pred             hCCCCCCC-CcEEEECChHHHHHHHHHHhcCCCCEEEEeCCCccchHHHHHHcCCEEEEEecCccccccCHHHHHhhcCc
Confidence            89752100 14666666 67777777888654                                           101  


Q ss_pred             cccEEEEcCccc--ccc---cChHHHHHHhhhcCCeEEEeccccccccc-----------------eeeeec-c----CC
Q psy10669        123 RFDFLSSGTTCY--SRC---LDYARFRQICDETDSIMFADMSHISGLIA-----------------GVKGVT-K----TG  175 (337)
Q Consensus       123 ~pklII~~~S~~--~~~---~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----------------g~~~T~-~----~G  175 (337)
                      ++|+|++..-++  +..   -++++|.++|+++|+++++|+++.--...                 .++.+. |    .|
T Consensus       162 ~~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pG  241 (384)
T PRK12414        162 RTRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTG  241 (384)
T ss_pred             ccEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCcc
Confidence            267777752233  343   35667778889999999999998532111                 112222 2    12


Q ss_pred             ---chhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCC
Q psy10669        176 ---EKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDV  250 (337)
Q Consensus       176 ---g~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~  250 (337)
                         |+++.  ++.+.+.....-... +.+.+...++...+..  ...+.+.++++.++.+.+.+.|.+.|+.+... ..+
T Consensus       242 lRiG~~v~~~~l~~~l~~~~~~~~~-~~s~~~q~a~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~-~gg  317 (384)
T PRK12414        242 WRVGYCLAPAELMDEIRKVHQFMVF-SADTPMQHAFAEALAE--PASYLGLGAFYQRKRDLLARELAGSRFELLPS-EGS  317 (384)
T ss_pred             ceEEEEecCHHHHHHHHHHHhheec-CCCcHHHHHHHHHhcC--ChHHHHHHHHHHHHHHHHHHHHHhCCCeecCC-Ccc
Confidence               66654  455555443211112 2233344444333322  12234556778888899999999999887642 234


Q ss_pred             eEEEEEecC--CCcchHHHHHHHhhcCceecc
Q psy10669        251 HLILIDLRK--NKLTGSKVELVLEEIAIACNK  280 (337)
Q Consensus       251 h~v~V~~~~--~~~~~~~~~~~L~~~gI~v~~  280 (337)
                      -.+++++..  ...+...+.+.|++.||.+.+
T Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~l~~~gV~v~p  349 (384)
T PRK12414        318 FFMLARFRHFSDESDSDFVLRLIRDARVATIP  349 (384)
T ss_pred             eEEEEcccccCCCCHHHHHHHHHHhCCEEEec
Confidence            455667654  122445555778888999886

>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic

Probab=98.73  E-value=1.7e-07  Score=91.91  Aligned_cols=154  Identities=15%  Similarity=0.119  Sum_probs=101.1

Q ss_pred             ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669         70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------  119 (337)
Q Consensus        70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------  119 (337)
                      |+...+++|    +++++++|.++     .+.++||+.|..+++. ++++                              
T Consensus        45 ~~p~~~~le----~~la~l~g~~~-----~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~  114 (378)
T TIGR01329        45 GNPTRTALE----SLLAKLDKADR-----AFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVV  114 (378)
T ss_pred             CChHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHHHHHHHcCcEEE
Confidence            555667787    57889999975     6888999888666655 6553                              


Q ss_pred             ----------ccc---cccEEEEc-Ccc-cccccChHHHHHHhhhcCCeEEEeccccccccc-----e---e-eeecc--
Q psy10669        120 ----------NNA---RFDFLSSG-TTC-YSRCLDYARFRQICDETDSIMFADMSHISGLIA-----G---V-KGVTK--  173 (337)
Q Consensus       120 ----------~~a---~pklII~~-~S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----g---~-~~T~~--  173 (337)
                                +.+   ++|+|++. +++ .+...|+++|.++|+++|++++||.+|.+|+..     |   + .+.+|  
T Consensus       115 ~vd~~d~~~le~~i~~~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~~~~~~~l~~g~Di~v~S~tK~l  194 (378)
T TIGR01329       115 HVDTTDLDKVKAALGPKTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMSPLLCNPLELGADIVYHSATKFL  194 (378)
T ss_pred             EeCCCCHHHHHHhcCcCceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccCChhhcCCcEEEEecceec
Confidence                      111   26888776 434 357889999999999999999999999888754     1   2 22222  


Q ss_pred             ------CCchhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC
Q psy10669        174 ------TGEKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR  239 (337)
Q Consensus       174 ------~Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~  239 (337)
                            .||+++.   ++.+++.+...  ..|+...+.-+.+.  +..+  .....+.++-.+|+..+++.|.+.
T Consensus       195 ~G~~~~~~G~v~~~~~~~~~~~~~~~~--~~G~~~~~~~a~l~--~~~l--~tl~~R~e~~~~na~~la~~L~~~  263 (378)
T TIGR01329       195 AGHSDVMAGVLAVKGEEIAKKVYFLQN--STGSGLAPFDCWLL--LRGI--KTLAIRIEKQQENARAIAMFLSTH  263 (378)
T ss_pred             cCCccceeEEEEeCcHHHHHHHHHHHH--hcCCcCCHHHHHHH--HccC--CCHHHHHHHHHHHHHHHHHHHHhC
Confidence                  1566644   35455554322  12233333333321  2222  356788999999999999999873

This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.

>PLN02624 ornithine-delta-aminotransferase

Probab=98.73  E-value=2.1e-06  Score=86.74  Aligned_cols=227  Identities=18%  Similarity=0.173  Sum_probs=127.4

Q ss_pred             CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhC-----
Q psy10669         43 SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL-----  117 (337)
Q Consensus        43 ~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl-----  117 (337)
                      +|.|.+|+...+. ++..++  ++++  +....+++    ++++++|+.+.     .+..+||+.||.++++-..     
T Consensus        93 ~p~v~~ai~~ql~-~~~~~~--~~~~--~~~~~~la----~~L~~~~~~~~-----~~f~~SGseA~e~AlklAr~~~~~  158 (474)
T PLN02624         93 HPKIIKALTEQAE-KLTLSS--RAFY--NDKFPEFA----EYLTSMFGYDM-----VLPMNTGAEGVETAIKLARKWGYE  158 (474)
T ss_pred             CHHHHHHHHHHHH-hcCCcc--cccC--CHHHHHHH----HHHHhhcCCCe-----EEEeCChHHHHHHHHHHHHHHHHh
Confidence            9999999987754 443322  2222  22223333    57778888653     4667899999987764110     


Q ss_pred             -------Cc-----------------------------------------------c--cc----cccEEEEcCccc---
Q psy10669        118 -------PT-----------------------------------------------N--NA----RFDFLSSGTTCY---  134 (337)
Q Consensus       118 -------~~-----------------------------------------------~--~a----~pklII~~~S~~---  134 (337)
                             +.                                               +  +.    +...||+.+ ..   
T Consensus       159 ~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~iaaiiiEp-v~~~~  237 (474)
T PLN02624        159 KKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDFGDLDALEKIFEEDGDRIAAFLFEP-IQGEA  237 (474)
T ss_pred             hcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCCCCHHHHHHHHHhCCCCEEEEEECC-ccCCC
Confidence                   00                                               0  00    124566652 33   


Q ss_pred             ccccC----hHHHHHHhhhcCCeEEEecccccccc--c--------e----eeeecc--CCchh-h----h--hHHHHHh
Q psy10669        135 SRCLD----YARFRQICDETDSIMFADMSHISGLI--A--------G----VKGVTK--TGEKI-L----Y--DYEEKIN  187 (337)
Q Consensus       135 ~~~~d----~~~l~eia~~~ga~l~vD~AH~~Gli--~--------g----~~~T~~--~Gg~i-~----~--~l~~~i~  187 (337)
                      +...+    +++|+++|+++|++|++|++|+ |+-  +        +    +...+|  .||++ +    .  ++.+.+.
T Consensus       238 G~v~p~~~~L~~l~~lc~~~gillI~DEv~t-G~GrtG~~~a~~~~~i~pDiv~lsK~lggG~~pigav~~~~~i~~~~~  316 (474)
T PLN02624        238 GVVIPPDGYLKAVRELCSKHNVLMIADEIQT-GLARTGKMLACDWEEVRPDVVILGKALGGGVIPVSAVLADKDVMLCIK  316 (474)
T ss_pred             CCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CcCcCcchhhHHhcCCCCCEEEecccccCCCCcceeeeecHHHHhHhc
Confidence            33445    8889999999999999999997 531  1        1    011122  13322 2    1  3434343


Q ss_pred             hccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC--CE-Eec-CCCCCeEEEEEecCCC--
Q psy10669        188 NAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG--YH-VVT-GGTDVHLILIDLRKNK--  261 (337)
Q Consensus       188 ~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G--~~-v~~-~~t~~h~v~V~~~~~~--  261 (337)
                      +......+ +.++...++..+++..+.+   .+..+++.++.++|++.|.+..  +. ++. -.....+..|.+....  
T Consensus       317 ~~~~~~T~-~g~pl~~aaa~aaLe~l~~---~~l~~~~~~~~~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~l~~~~~~  392 (474)
T PLN02624        317 PGEHGSTF-GGNPLASAVAMAALQVVQD---EKLAERSAKLGQELRDQLQKIQKQFPKLIKEVRGRGLLNAVVLNSPKLG  392 (474)
T ss_pred             cCCcCCCC-CCCHHHHHHHHHHHHHHHh---chHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeeEEEEEEEecCCCcC
Confidence            32221222 3566666666666655532   2456677788888888887732  22 111 0023445566665422  


Q ss_pred             -cchHHHHHHHhhcCceeccCc--ccchhhh
Q psy10669        262 -LTGSKVELVLEEIAIACNKNT--GISLAAE  289 (337)
Q Consensus       262 -~~~~~~~~~L~~~gI~v~~~~--girig~~  289 (337)
                       ....++.+.|.+.||.+.+..  .|||..+
T Consensus       393 ~~~a~~~~~~L~e~GV~v~p~~~~~lR~~p~  423 (474)
T PLN02624        393 PVSAYDVCLKLKERGLLAKPTHDTIIRLAPP  423 (474)
T ss_pred             hHHHHHHHHHHHhCCeEEecCCCCEEEEECC
Confidence             234567777888999997643  5788643

>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=98.72  E-value=1.6e-07  Score=93.87  Aligned_cols=88  Identities=16%  Similarity=0.045  Sum_probs=70.1

Q ss_pred             ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669         70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------  119 (337)
Q Consensus        70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------  119 (337)
                      ++...+++|    +++++++|.++     ++.+.||+.|+.+++.+++++                              
T Consensus        67 ~~p~~~~Le----~~lA~l~g~~~-----av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~  137 (436)
T PRK07812         67 MNPTQDVVE----QRIAALEGGVA-----ALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVS  137 (436)
T ss_pred             CCchHHHHH----HHHHHHhCCCe-----EEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEE
Confidence            456667888    58899999986     699999999998888988754                              


Q ss_pred             -----------ccc---cccEEEEcCcc--cccccChHHHHHHhhhcCCeEEEeccccccccc
Q psy10669        120 -----------NNA---RFDFLSSGTTC--YSRCLDYARFRQICDETDSIMFADMSHISGLIA  166 (337)
Q Consensus       120 -----------~~a---~pklII~~~S~--~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~  166 (337)
                                 +.+   ++++|++...+  .+...|+++|.++|+++|++++||++|.+|+..
T Consensus       138 ~vdd~~d~e~l~~ai~~~tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD~t~a~~~~~  200 (436)
T PRK07812        138 FVEDPDDLDAWRAAVRPNTKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVDNTIATPYLI  200 (436)
T ss_pred             EECCCCCHHHHHHhCCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccC
Confidence                       001   25778776333  368899999999999999999999999988665

>PLN03026 histidinol-phosphate aminotransferase; Provisional

Probab=98.71  E-value=4.3e-06  Score=81.96  Aligned_cols=225  Identities=15%  Similarity=0.088  Sum_probs=139.3

Q ss_pred             ccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCc-
Q psy10669         30 INGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGS-  106 (337)
Q Consensus        30 ~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt-  106 (337)
                      ..-|.|-..||..  +|.|++++... ..  .      +.|... ...++    ++.+++++|.++    .+|.+++|+ 
T Consensus        52 ~~~i~l~~n~~p~~~~~~v~~a~~~~-~~--~------~~Yp~~-~~~~l----r~~ia~~~~~~~----~~I~~t~Ga~  113 (380)
T PLN03026         52 EDIVKLDANENPYGPPPEVLEALGNM-KF--P------YVYPDP-ESRRL----RAALAEDSGLES----ENILVGCGAD  113 (380)
T ss_pred             cceEEccCCCCCCCCCHHHHHHHHhh-Hh--h------ccCCCC-CHHHH----HHHHHHHhCcCh----hhEEEcCCHH
Confidence            3557777777764  88898888532 11  0      112211 12333    467889999876    368899995 


Q ss_pred             hhHHHHHHhhCCc------------------------------------------c-c--ccccEEEEcCccc--ccccC
Q psy10669        107 PANFAVCEKALPT------------------------------------------N-N--ARFDFLSSGTTCY--SRCLD  139 (337)
Q Consensus       107 ~AN~~v~~aLl~~------------------------------------------~-~--a~pklII~~~S~~--~~~~d  139 (337)
                      ++...++.+++++                                          + .  .++|+|++..-++  +...|
T Consensus       114 ~~i~~~~~~~~~~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~~~v~l~~P~NPTG~~~~  193 (380)
T PLN03026        114 ELIDLLMRCVLDPGDKIIDCPPTFGMYVFDAAVNGAEVIKVPRTPDFSLDVPRIVEAVETHKPKLLFLTSPNNPDGSIIS  193 (380)
T ss_pred             HHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecCCCCCcCHHHHHHHHhccCCcEEEEeCCCCCCCCCCC
Confidence            5766666777543                                          0 0  1267777653233  58889


Q ss_pred             hHHHHHHhhhcCCeEEEeccccc----c----ccc-----eeeeec-c----CC---chhhh--hHHHHHhhccCCCCCC
Q psy10669        140 YARFRQICDETDSIMFADMSHIS----G----LIA-----GVKGVT-K----TG---EKILY--DYEEKINNAVFPSLQG  196 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~~----G----li~-----g~~~T~-~----~G---g~i~~--~l~~~i~~~~~p~~~g  196 (337)
                      .+++.+|++.. +++++|+++.-    +    .+.     .+..|. |    .|   |++++  ++.+.+.....|.   
T Consensus       194 ~~~l~~l~~~~-~~vi~DeaY~~~~~~~~~~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~~~~i~~l~~~~~~~---  269 (380)
T PLN03026        194 DDDLLKILELP-ILVVLDEAYIEFSTQESRMKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY---  269 (380)
T ss_pred             HHHHHHHHhcC-CEEEEECcchhhcCCcchHHHHHhCCCEEEEecchHhhcCccccceeeecCHHHHHHHHHhcCCC---
Confidence            99999999865 89999999731    1    111     123333 2    23   77765  5666666544442   


Q ss_pred             CCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCC-EEecCCCCCeEEEEEecCCCcchHHHHHHHhhcC
Q psy10669        197 GPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGY-HVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIA  275 (337)
Q Consensus       197 ~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~-~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~g  275 (337)
                      +.+.+...+...++..  ....++.++++.++-+++.+.|.+.|+ .+..  +.+..+++.+.. +.+..++.+.|.+.|
T Consensus       270 ~~~~~~q~aa~~aL~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p--~~~~f~~~~~~~-~~~~~~~~~~l~~~g  344 (380)
T PLN03026        270 NVSVAAEVAACAALSN--PKYLEDVKNALVEERERLFGLLKEVPFLEPYP--SDANFILCRVTS-GRDAKKLKEDLAKMG  344 (380)
T ss_pred             CCCHHHHHHHHHHhhC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCeECC--CCCeEEEEECCC-CCCHHHHHHHHHHCC
Confidence            2344444444444432  123356677888888889999988764 4433  556677777654 346778888888889


Q ss_pred             ceeccC
Q psy10669        276 IACNKN  281 (337)
Q Consensus       276 I~v~~~  281 (337)
                      |.+...
T Consensus       345 I~v~~~  350 (380)
T PLN03026        345 VMVRHY  350 (380)
T ss_pred             eEEEEC
Confidence            998753

>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional

Probab=98.71  E-value=1.7e-06  Score=84.64  Aligned_cols=193  Identities=13%  Similarity=0.061  Sum_probs=116.4

Q ss_pred             chHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhh-CCc-------------------------------
Q psy10669         72 QFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKA-LPT-------------------------------  119 (337)
Q Consensus        72 ~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aL-l~~-------------------------------  119 (337)
                      ...+++|    +.+++++|.++     .+.++||+.|...++.++ +++                               
T Consensus        31 ~~~~~~e----~~la~~~g~~~-----~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t~~~~~~~~~~~G~~~v~~d~d  101 (375)
T PRK11706         31 GFTRRCQ----QWLEQRFGSAK-----VLLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTANAFVLRGAKIVFVDIR  101 (375)
T ss_pred             HHHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecC
Confidence            3446676    46678899875     466677788865544544 332                               


Q ss_pred             -----------ccc---cccEEEEcCcccccccChHHHHHHhhhcCCeEEEecccccccc-c----------eeeeec--
Q psy10669        120 -----------NNA---RFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLI-A----------GVKGVT--  172 (337)
Q Consensus       120 -----------~~a---~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli-~----------g~~~T~--  172 (337)
                                 +.+   ++|+|++.+ .++...|+++|.++|+++|++++.|+||+.|.. .          ++.|.+  
T Consensus       102 ~~~~~~d~~~le~~i~~~tk~i~~~~-~~G~~~~~~~i~~la~~~~i~vIeD~a~a~g~~~~~~~~g~~~~~~~~Sf~~~  180 (375)
T PRK11706        102 PDTMNIDETLIEAAITPKTRAIVPVH-YAGVACEMDTIMALAKKHNLFVVEDAAQGVMSTYKGRALGTIGHIGCFSFHET  180 (375)
T ss_pred             CCcCCcCHHHHHHhcCCCCeEEEEeC-CCCCccCHHHHHHHHHHcCCEEEEECccccccccCCeeeecCcCEEEEeCCCC
Confidence                       111   268888763 568889999999999999999999999998863 2          111211  


Q ss_pred             c-----CCchhhh---hHHHHHhhccCCC------------------CCCCCc-HHHHHHHHHHHHHHhchhhHHHHHHH
Q psy10669        173 K-----TGEKILY---DYEEKINNAVFPS------------------LQGGPH-NHAIGAIATAMLQAQSDEFKSYQAQV  225 (337)
Q Consensus       173 ~-----~Gg~i~~---~l~~~i~~~~~p~------------------~~g~~~-~~~iaala~a~~e~~~~~~~~y~~~v  225 (337)
                      |     .||.++.   ++.+++......+                  ...+.. ....|++..+  ++  ...++..++-
T Consensus       181 K~l~~g~gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~--ql--~~l~~~~~~R  256 (375)
T PRK11706        181 KNYTAGEGGALLINDPALIERAEIIREKGTNRSQFFRGQVDKYTWVDIGSSYLPSELQAAYLWA--QL--EAADRINQRR  256 (375)
T ss_pred             ccccccCCeEEEECCHHHHHHHHHHHHcCCCcchhhccCCCcceeeecccccCcCHHHHHHHHH--HH--HHHHHHHHHH
Confidence            2     2555543   3554333211100                  111222 2334444333  32  2345666777


Q ss_pred             HHHHHHHHHHHHhC---C-CEEec--CC--CCCeEEEEEecCCCcchHHHHHHHhhcCceec
Q psy10669        226 KANASHLSDEMIKR---G-YHVVT--GG--TDVHLILIDLRKNKLTGSKVELVLEEIAIACN  279 (337)
Q Consensus       226 ~~na~~l~~~L~~~---G-~~v~~--~~--t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~  279 (337)
                      .+|++.+.+.|...   | +.+..  ++  ...|+.++.+.+. .+..++.+.|.+.||.+.
T Consensus       257 ~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~r~~l~~~L~~~gI~~~  317 (375)
T PRK11706        257 LALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKLRDL-EDRSALINFLKEAGIMAV  317 (375)
T ss_pred             HHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEEECCc-CCHHHHHHHHHHCCCCcc
Confidence            78888888888764   2 33221  11  2356777777543 367888899999999875

>PRK08064 cystathionine beta-lyase; Provisional

Probab=98.71  E-value=8.3e-07  Score=87.46  Aligned_cols=195  Identities=12%  Similarity=0.107  Sum_probs=124.1

Q ss_pred             ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669         70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------  119 (337)
Q Consensus        70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------  119 (337)
                      ++...+++|    +++++++|+++     ++.+.||+.|...++. ++++                              
T Consensus        52 ~~p~~~~le----~~lA~l~g~~~-----~v~~~sG~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~  121 (390)
T PRK08064         52 GNPTREALE----DIIAELEGGTK-----GFAFASGMAAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHT  121 (390)
T ss_pred             CChhHHHHH----HHHHHHhCCCC-----eEEECCHHHHHHHHHH-HhCCCCEEEEccCccchHHHHHHHHHHHcCCEEE
Confidence            345567787    58899999885     6888999988777665 4432                              


Q ss_pred             ----------ccc---cccEEEEc-Ccc-cccccChHHHHHHhhhcCCeEEEeccccccccc-----e---e-eeecc--
Q psy10669        120 ----------NNA---RFDFLSSG-TTC-YSRCLDYARFRQICDETDSIMFADMSHISGLIA-----G---V-KGVTK--  173 (337)
Q Consensus       120 ----------~~a---~pklII~~-~S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----g---~-~~T~~--  173 (337)
                                +.+   ++|+|++. +++ .+...|+++|.++|+++|++++||++|..++..     |   + .+.+|  
T Consensus       122 ~v~~~d~~~l~~~l~~~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~~~~~g~Divv~S~tK~~  201 (390)
T PRK08064        122 FVDMTNLEEVAQNIKPNTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDNTFLTPLLQKPLDLGADVVLHSATKFL  201 (390)
T ss_pred             EECCCCHHHHHHhcCCCceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEECCCCcccccCchhhCCcEEEeecceec
Confidence                      001   26888776 433 468899999999999999999999999887643     1   2 23222  


Q ss_pred             ---C---Cchhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC-C-E
Q psy10669        174 ---T---GEKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG-Y-H  242 (337)
Q Consensus       174 ---~---Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G-~-~  242 (337)
                         .   +|+++.   ++.++++....+  .|....+.-+.+  .+..+  .....++++..+|+..+++.|.+.+ + +
T Consensus       202 ~G~~~~laG~~v~~~~~~~~~l~~~~~~--~g~~~~~~~a~l--~~~gl--~tl~~R~~~~~~~a~~la~~L~~~~~v~~  275 (390)
T PRK08064        202 AGHSDVLAGLAVVKDEELAQKLYFLQNS--FGAVLGVQDCWL--VLRGL--KTLHVRLEHSSETANKIALYLQEHPKVQN  275 (390)
T ss_pred             cCCccceeEEEEeCCHHHHHHHHHHHHh--cCCCCCHHHHHH--HHccc--CcHHHHHHHHHHHHHHHHHHHhcCCCcce
Confidence               1   365543   466666654332  233333444443  22333  2356888999999999999999853 1 2


Q ss_pred             EecCCC---------------CCeEEEEEecCCCcchHHHHHHHhhcCceeccCcccchh
Q psy10669        243 VVTGGT---------------DVHLILIDLRKNKLTGSKVELVLEEIAIACNKNTGISLA  287 (337)
Q Consensus       243 v~~~~t---------------~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~girig  287 (337)
                      |+..+-               -.-++.+.++  +  ...+.+.++..++...   |+++|
T Consensus       276 v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~--~--~~~~~~f~~~l~l~~~---~~s~G  328 (390)
T PRK08064        276 VYYPGLQTHLGFDIQQSQATSAGAVLSFTLQ--S--EEAVRQFVSHVKLPVF---AVSLG  328 (390)
T ss_pred             EECCCCCCCccHHHHHHhCCCcceEEEEEEC--C--HHHHHHHHHhCCcceE---cccCC
Confidence            332211               1225555553  3  3467788888777554   56776

>PRK07811 cystathionine gamma-synthase; Provisional

Probab=98.70  E-value=4.2e-07  Score=89.55  Aligned_cols=189  Identities=14%  Similarity=0.094  Sum_probs=118.5

Q ss_pred             ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669         70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------  119 (337)
Q Consensus        70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------  119 (337)
                      ++....++|    +++++++|.++     ++.+.||+.|+..++.+++++                              
T Consensus        59 ~~p~~~~Le----~~lA~~~g~~~-----~i~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~  129 (388)
T PRK07811         59 GNPTRTALE----EQLAALEGGAY-----GRAFSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYT  129 (388)
T ss_pred             CCccHHHHH----HHHHHHhCCCc-----eEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEE
Confidence            345567777    58899999986     688899999999999998754                              


Q ss_pred             ----------ccc---cccEEEEc-Ccc-cccccChHHHHHHhhhcCCeEEEeccccccccc-----e---eeee-c---
Q psy10669        120 ----------NNA---RFDFLSSG-TTC-YSRCLDYARFRQICDETDSIMFADMSHISGLIA-----G---VKGV-T---  172 (337)
Q Consensus       120 ----------~~a---~pklII~~-~S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----g---~~~T-~---  172 (337)
                                +.+   ++|+|++. +++ .+...|+++|.++|+++|+++++|++|..|...     +   ++++ .   
T Consensus       130 ~~d~~d~e~l~~~i~~~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD~a~a~~~~~~p~~~gaDivv~S~sK~l  209 (388)
T PRK07811        130 PVDLSDLDAVRAAITPRTKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVDNTFASPYLQQPLALGADVVVHSTTKYI  209 (388)
T ss_pred             EeCCCCHHHHHHhcCcCCeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEECCCCccccCCchhhCCcEEEecCceee
Confidence                      101   26888875 433 247889999999999999999999999988753     1   2222 2   


Q ss_pred             --c---CCchhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCE-
Q psy10669        173 --K---TGEKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYH-  242 (337)
Q Consensus       173 --~---~Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~-  242 (337)
                        |   .||+++.   ++.+++.....  ..|....+.-+.  .++..+  .....+.++..+|++.+++.|.+. ++. 
T Consensus       210 ~g~~~~~gG~vv~~~~~l~~~~~~~~~--~~g~~~s~~~a~--l~~~~L--~tl~~R~~~~~~na~~la~~L~~~p~v~~  283 (388)
T PRK07811        210 GGHSDVVGGALVTNDEELDEAFAFLQN--GAGAVPGPFDAY--LTLRGL--KTLAVRMDRHSENAEAVAEFLAGHPEVST  283 (388)
T ss_pred             cCCCCcEEEEEEECCHHHHHHHHHHHH--hcCCCCCHHHHH--HHHhcc--CcHHHHHHHHHHHHHHHHHHHHhCCCeeE
Confidence              2   2565553   35554442211  112222222222  233333  245678888999999999999984 554 


Q ss_pred             EecCCCCCe---------------EEEEEecCCCcchHHHHHHHhhcCc
Q psy10669        243 VVTGGTDVH---------------LILIDLRKNKLTGSKVELVLEEIAI  276 (337)
Q Consensus       243 v~~~~t~~h---------------~v~V~~~~~~~~~~~~~~~L~~~gI  276 (337)
                      |..++..+|               ++.+.+.  + +...+.+.++...+
T Consensus       284 V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~--~-~~~~~~~f~~~l~~  329 (388)
T PRK07811        284 VLYPGLPSHPGHEVAARQMRGFGGMVSVRLA--G-GEEAARDFCARTKV  329 (388)
T ss_pred             EECCCCCCCchHHHHHHhcCCCCceEEEEeC--C-CHHHHHHHHHhCCc
Confidence            333333333               5555554  2 33455566665444

>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=98.69  E-value=4.5e-07  Score=90.65  Aligned_cols=121  Identities=12%  Similarity=0.036  Sum_probs=84.7

Q ss_pred             eeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHH
Q psy10669         33 IELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV  112 (337)
Q Consensus        33 i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v  112 (337)
                      -.+..|..|..+.+.+++... .... .++.-+|.  ++...+.+|    +++++++|+++     .|.|+||+.|+.++
T Consensus        34 ~Pi~~sstf~~~~~~~~~~~~-~~~~-~~~~Y~r~--~~pt~~~le----~~la~l~g~~~-----~v~fsSG~~Ai~~a  100 (437)
T PRK05613         34 LPIYQTTSYVFDSAEHAKQRF-ALED-LGPIYSRL--TNPTVEALE----NRIASLEGGVH-----AVAFASGQAAETAA  100 (437)
T ss_pred             CCEeCCCCcccCCHHHHHHhh-cccc-CCceeeCc--cChHHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHH
Confidence            347778888877777665421 1111 12222222  456667777    58899999975     79999999998888


Q ss_pred             HHhhCCc--------------------------------c---------cc---cccEEEEc-Cccc-ccccChHHHHHH
Q psy10669        113 CEKALPT--------------------------------N---------NA---RFDFLSSG-TTCY-SRCLDYARFRQI  146 (337)
Q Consensus       113 ~~aLl~~--------------------------------~---------~a---~pklII~~-~S~~-~~~~d~~~l~ei  146 (337)
                      +.+++++                                .         .+   ++|+|++. .++. +...|+++|.++
T Consensus       101 l~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~~d~e~l~~~l~~~tk~V~~e~~~Np~~~v~di~~I~~l  180 (437)
T PRK05613        101 ILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVENPDDPESWQAAVQPNTKAFFGETFANPQADVLDIPAVAEV  180 (437)
T ss_pred             HHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEECCCCCHHHHHHhCCccCeEEEEECCCCCCCcccCHHHHHHH
Confidence            8888654                                0         01   16777774 3332 468999999999


Q ss_pred             hhhcCCeEEEeccccccccc
Q psy10669        147 CDETDSIMFADMSHISGLIA  166 (337)
Q Consensus       147 a~~~ga~l~vD~AH~~Gli~  166 (337)
                      |+++|++++||.+|..|..-
T Consensus       181 a~~~gi~livD~t~a~g~~~  200 (437)
T PRK05613        181 AHRNQVPLIVDNTIATAALV  200 (437)
T ss_pred             HHHcCCeEEEECCCcccccc
Confidence            99999999999999988654

>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue

Probab=98.69  E-value=4.1e-07  Score=87.71  Aligned_cols=158  Identities=16%  Similarity=0.192  Sum_probs=99.1

Q ss_pred             cEEEEc-Ccc-cccccChHHHHHH---hhhcCCeEEEeccccccccc-----------------eeeeec-c----CC--
Q psy10669        125 DFLSSG-TTC-YSRCLDYARFRQI---CDETDSIMFADMSHISGLIA-----------------GVKGVT-K----TG--  175 (337)
Q Consensus       125 klII~~-~S~-~~~~~d~~~l~ei---a~~~ga~l~vD~AH~~Gli~-----------------g~~~T~-~----~G--  175 (337)
                      ++|++. +.+ .+...+.+++.+|   |+++|.++++|++|.....+                 .++.+. |    .|  
T Consensus       150 ~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlR  229 (363)
T PF00155_consen  150 KAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLR  229 (363)
T ss_dssp             EEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGGGT
T ss_pred             ceeeecccccccccccccccccchhhhhcccccceeeeeceeccccCCCccCcccccccccccceeeeeccccccccccc
Confidence            556654 222 3567777777766   99999999999999875555                 122332 2    25  


Q ss_pred             -chhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHh--chhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCC
Q psy10669        176 -EKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQ--SDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDV  250 (337)
Q Consensus       176 -g~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~--~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~  250 (337)
                       |++++  ++.+.+.....++..   +.+..++++..+..-.  ....++.++++.++.+.|.+.|.+.|+.+..+. .+
T Consensus       230 vG~i~~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~-~~  305 (363)
T PF00155_consen  230 VGYIVAPPELIERLRRFQRSGLS---SSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEIGITVLPPE-AG  305 (363)
T ss_dssp             EEEEEEEHHHHHHHHHHHHHTTS---SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSEEEHHS-BS
T ss_pred             cccccchhhhhhhhhhccccccc---cchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhhhheeecc-Cc
Confidence             77765  566666654333333   2233333333333322  125578899999999999999999999998632 45


Q ss_pred             eEEEEEecCCCcchHHHHHHHhh-cCceeccCc------ccchhh
Q psy10669        251 HLILIDLRKNKLTGSKVELVLEE-IAIACNKNT------GISLAA  288 (337)
Q Consensus       251 h~v~V~~~~~~~~~~~~~~~L~~-~gI~v~~~~------girig~  288 (337)
                      ..+++.+...  +..++.+.|.+ .||.+.+-.      .|||+.
T Consensus       306 ~~~~~~~~~~--~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~  348 (363)
T PF00155_consen  306 FFLWVRLDPN--DAEELAQELLEEYGILVRPGSYFGVPGYIRISL  348 (363)
T ss_dssp             SEEEEEESHH--HHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEG
T ss_pred             cEEEEEcccc--hHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEe
Confidence            5555655543  45666677776 499998733      577765

On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....

>PRK07550 hypothetical protein; Provisional

Probab=98.68  E-value=9.4e-06  Score=79.42  Aligned_cols=252  Identities=12%  Similarity=0.045  Sum_probs=138.8

Q ss_pred             HHHHHHHHHHhhcccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCC
Q psy10669         17 ELYSLIKKEKHRQINGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPE   94 (337)
Q Consensus        17 ~~~~~~~~e~~rq~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~   94 (337)
                      ++.+...+.+......+.|-.+++-.  ++.+.+++.+.+.+..      ...|....-..++.....+.+.+.+|....
T Consensus        16 ~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~------~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~   89 (386)
T PRK07550         16 EVRAWLAGYDGADGPLIDLSQAVPGYPPPPELLRALAEAAADPA------AHLYGPVEGLPELREAYAAHYSRLYGAAIS   89 (386)
T ss_pred             HHHHHHHHHhhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCcC------CcCCCCCCCCHHHHHHHHHHHHHHhCCCCC
Confidence            33333333333344567777777544  6778887776542111      111221111234543334566666664322


Q ss_pred             CCcceeecCCC-chhHHHHHHhhCCc-----------------------------------------ccc-----cccEE
Q psy10669         95 QWGCNVQPYSG-SPANFAVCEKALPT-----------------------------------------NNA-----RFDFL  127 (337)
Q Consensus        95 ~~~~~v~~~Sg-t~AN~~v~~aLl~~-----------------------------------------~~a-----~pklI  127 (337)
                      .  -+|.+++| ++|...++.+++++                                         .+.     ++++|
T Consensus        90 ~--~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v  167 (386)
T PRK07550         90 P--EQVHITSGCNQAFWAAMVTLAGAGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEALITPRTRAI  167 (386)
T ss_pred             c--ceEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHHHHHhcccCcEE
Confidence            1  26888888 56877777888653                                         000     15664


Q ss_pred             EE-cCcc-cccccC---hHHHHHHhhhcCCeEEEeccccc---------cccc--------eeeeec-c-------CCch
Q psy10669        128 SS-GTTC-YSRCLD---YARFRQICDETDSIMFADMSHIS---------GLIA--------GVKGVT-K-------TGEK  177 (337)
Q Consensus       128 I~-~~S~-~~~~~d---~~~l~eia~~~ga~l~vD~AH~~---------Gli~--------g~~~T~-~-------~Gg~  177 (337)
                      ++ .+++ .+...+   .++|.++|+++|+++++|+++.-         .++.        .+.++. |       +.|+
T Consensus       168 ~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~  247 (386)
T PRK07550        168 ALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGA  247 (386)
T ss_pred             EEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCcccceEe
Confidence            44 4443 234444   56778899999999999998641         1111        011221 2       2477


Q ss_pred             hhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEE
Q psy10669        178 ILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLIL  254 (337)
Q Consensus       178 i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~  254 (337)
                      +++  ++.+.+.....+... +++.....+++.++..+ ...-++.++++.++.+.+.+.|.+. ++.+..  +....++
T Consensus       248 i~~~~~~~~~~~~~~~~~~~-~~s~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~g~~~~~  323 (386)
T PRK07550        248 VVASPARIAEIEKFMDTVAI-CAPRIGQIAVAWGLPNL-ADWRAGNRAEIARRRDAFRAVFARLPGWELLA--SGAYFAY  323 (386)
T ss_pred             eecCHHHHHHHHHHHhhccc-CCCcHHHHHHHHHhccH-HHHHHHHHHHHHHHHHHHHHHHHhCCCceeCC--CceEEEE
Confidence            765  455555544332222 23333434444444332 1122345667788888898998884 776543  4456677


Q ss_pred             EEecCCCcchHHHHHHH-hhcCceecc
Q psy10669        255 IDLRKNKLTGSKVELVL-EEIAIACNK  280 (337)
Q Consensus       255 V~~~~~~~~~~~~~~~L-~~~gI~v~~  280 (337)
                      +.+...+.+..++...| ++.||.+.+
T Consensus       324 ~~~~~~~~~~~~l~~~l~~~~gv~v~p  350 (386)
T PRK07550        324 VRHPFPDRPSREVARRLAKEAGILCLP  350 (386)
T ss_pred             ecCCCCCCCHHHHHHHHHHhcCEEEeC
Confidence            77655355777877765 568999876

>PRK08153 histidinol-phosphate aminotransferase; Provisional

Probab=98.68  E-value=4e-06  Score=81.76  Aligned_cols=234  Identities=11%  Similarity=0.043  Sum_probs=143.0

Q ss_pred             ceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhH
Q psy10669         32 GIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPAN  109 (337)
Q Consensus        32 ~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN  109 (337)
                      .++|-..||..  +|.+.+++...+...  .+|+-      .. ..+++    +.++++++.+.    .+|.+++|+..+
T Consensus        34 ~~~l~~~~~~~~~~~~~~~a~~~~~~~~--~~Y~~------~~-~~~Lr----~~ia~~~~~~~----~~I~it~G~~~~   96 (369)
T PRK08153         34 RARIGANESGFGPSPSVIAAMREAAAEI--WKYGD------PE-NHDLR----HALAAHHGVAP----ENIMVGEGIDGL   96 (369)
T ss_pred             eeEecCCCCCCCCCHHHHHHHHHHHHHh--hcCCC------Cc-cHHHH----HHHHHHhCCCH----HHEEEcCCHHHH
Confidence            35777777776  889999987653211  12221      11 23444    67788898875    379999997654


Q ss_pred             H-HHHHhhCCc-----------------------------------------ccc---cccEEEEcCccc--ccccChHH
Q psy10669        110 F-AVCEKALPT-----------------------------------------NNA---RFDFLSSGTTCY--SRCLDYAR  142 (337)
Q Consensus       110 ~-~v~~aLl~~-----------------------------------------~~a---~pklII~~~S~~--~~~~d~~~  142 (337)
                      + .++.+++++                                         +..   ++++|++..-.+  +...+.++
T Consensus        97 l~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~~~~~~~~~~l~~~~~~~~~~~i~l~~P~NPtG~~~~~~~  176 (369)
T PRK08153         97 LGLIVRLYVEPGDPVVTSLGAYPTFNYHVAGFGGRLVTVPYRDDREDLDALLDAARRENAPLVYLANPDNPMGSWHPAAD  176 (369)
T ss_pred             HHHHHHHhcCCCCEEEECCCcchHHHHHHHHcCCeEEEeeCCCCCCCHHHHHHHhcccCCcEEEEeCCCCCCCCCCCHHH
Confidence            4 444555543                                         011   267777743344  57778888


Q ss_pred             HHHHhhhc--CCeEEEeccccc----cccc---------eeeeec-c----CC---chhhh--hHHHHHhhccCCCCCCC
Q psy10669        143 FRQICDET--DSIMFADMSHIS----GLIA---------GVKGVT-K----TG---EKILY--DYEEKINNAVFPSLQGG  197 (337)
Q Consensus       143 l~eia~~~--ga~l~vD~AH~~----Gli~---------g~~~T~-~----~G---g~i~~--~l~~~i~~~~~p~~~g~  197 (337)
                      +.++++..  |.+|++|+++.-    |-..         .+.+|. |    .|   |++++  ++.+.+.....+  . +
T Consensus       177 l~~l~~~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~~~~~~~~l~~~~~~--~-~  253 (369)
T PRK08153        177 IVAFIEALPETTLLVLDEAYCETAPAGAAPPIDTDDPNVIRMRTFSKAYGLAGARVGYAIGAPGTIKAFDKVRNH--F-G  253 (369)
T ss_pred             HHHHHHhCCCCcEEEEeCchhhhcCcccchhhhhcCCCEEEEecchHhccCcchheeeeecCHHHHHHHHHhhcC--C-C
Confidence            88776543  899999999752    1011         122332 2    13   67765  566655543322  2 3


Q ss_pred             CcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCce
Q psy10669        198 PHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIA  277 (337)
Q Consensus       198 ~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~  277 (337)
                      .+.+..+++..++..  ....++.++.+.++-+.+.+.|++.|+.+..  +.+..++++++.......++.+.|.+.||.
T Consensus       254 ~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~~~~~L~~~g~~~~p--~~~~f~~~~~~~~~~~a~~l~~~l~~~Gi~  329 (369)
T PRK08153        254 MNRIAQAAALAALKD--QAYLAEVVGKIAAARDRIAAIARANGLTPLP--SATNFVAIDCGRDGAFARAVLDGLIARDIF  329 (369)
T ss_pred             CCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCccCC--CcCcEEEEECCCCcccHHHHHHHHHHCCeE
Confidence            556666666565532  1223556777778888888889888987654  556678888764344566777777788999


Q ss_pred             ec-cC-----cccchhhh
Q psy10669        278 CN-KN-----TGISLAAE  289 (337)
Q Consensus       278 v~-~~-----~girig~~  289 (337)
                      +. +.     ..+||+..
T Consensus       330 v~~p~~~~~~~~iRis~~  347 (369)
T PRK08153        330 VRMPGVAPLDRCIRVSCG  347 (369)
T ss_pred             EeeCCCCCCCCeEEEecC
Confidence            95 21     15777643

>PRK07682 hypothetical protein; Validated

Probab=98.67  E-value=2.2e-05  Score=76.59  Aligned_cols=238  Identities=15%  Similarity=0.066  Sum_probs=134.3

Q ss_pred             ccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCC--CCCCcceeecCCC
Q psy10669         30 INGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLD--PEQWGCNVQPYSG  105 (337)
Q Consensus        30 ~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~--~~~~~~~v~~~Sg  105 (337)
                      ...|+|-..++-.  ++.+.+++...+.+.+ .+|      ....-..++.....+.+.+.+|.+  .+   -+|.+++|
T Consensus        20 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y------~~~~g~~~lr~~ia~~~~~~~g~~~~~~---~~i~~t~G   89 (378)
T PRK07682         20 EGVISLGVGEPDFVTPWNVREASIRSLEQGY-TSY------TANAGLLELRQEIAKYLKKRFAVSYDPN---DEIIVTVG   89 (378)
T ss_pred             CCeEEeCCCCCCCCCCHHHHHHHHHHHhcCC-CCC------CCCCCcHHHHHHHHHHHHHHhCCCCCCC---CcEEEeCC
Confidence            3568888888866  5567787765433211 122      111222334322223444444542  21   14778887


Q ss_pred             -chhHHHHHHhhCCc-------------------------------------------ccc---cccEEEE-cCcc-ccc
Q psy10669        106 -SPANFAVCEKALPT-------------------------------------------NNA---RFDFLSS-GTTC-YSR  136 (337)
Q Consensus       106 -t~AN~~v~~aLl~~-------------------------------------------~~a---~pklII~-~~S~-~~~  136 (337)
                       ++|+..++.+++++                                           +.+   ++++|++ .+.+ .+.
T Consensus        90 ~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~  169 (378)
T PRK07682         90 ASQALDVAMRAIINPGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAITAKTKAILLCSPNNPTGA  169 (378)
T ss_pred             hHHHHHHHHHHhCCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcCcccEEEEEECCCCCcCc
Confidence             67888888888754                                           000   2566644 3422 234


Q ss_pred             ccC---hHHHHHHhhhcCCeEEEeccccccccc----------------eeeeec-c----CC---chhhh--hHHHHHh
Q psy10669        137 CLD---YARFRQICDETDSIMFADMSHISGLIA----------------GVKGVT-K----TG---EKILY--DYEEKIN  187 (337)
Q Consensus       137 ~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~----------------g~~~T~-~----~G---g~i~~--~l~~~i~  187 (337)
                      ..+   +++|.++|+++++++++|+++.-....                .+.+|. |    .|   |+++.  ++.+.+.
T Consensus       170 ~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~i~~l~  249 (378)
T PRK07682        170 VLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAPVYFSEAML  249 (378)
T ss_pred             CcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCCChhhcccccCCEEEEecCcccccChhhhhhhhhcCHHHHHHHH
Confidence            443   667778899999999999997643221                112232 2    24   66665  4666554


Q ss_pred             hccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHH
Q psy10669        188 NAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKV  267 (337)
Q Consensus       188 ~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~  267 (337)
                      ........ +++....++...++..- ....++.+++..++.+++.+.|.+.|+++..+ ..+..+++.+...+.+..++
T Consensus       250 ~~~~~~~~-~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~p-~g~~~~~~~~~~~~~~~~~~  326 (378)
T PRK07682        250 KIHQYSMM-CAPTMAQFAALEALRAG-NDDVIRMRDSYRKRRNFFVTSFNEIGLTCHVP-GGAFYAFPSISSTGLSSEEF  326 (378)
T ss_pred             HHHHhhcc-CCCHHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHHCCCccCCC-CeeEEEEEeccCCCCCHHHH
Confidence            33221112 23334444444444321 12345667888899999999999999876542 23445566665445566667


Q ss_pred             HHHH-hhcCceecc
Q psy10669        268 ELVL-EEIAIACNK  280 (337)
Q Consensus       268 ~~~L-~~~gI~v~~  280 (337)
                      .+.| ++.||.+.+
T Consensus       327 ~~~ll~~~gv~v~p  340 (378)
T PRK07682        327 AEQLLLEEKVAVVP  340 (378)
T ss_pred             HHHHHHhCCEEEcC
Confidence            7665 568999886

>PLN02509 cystathionine beta-lyase

Probab=98.63  E-value=7.6e-07  Score=89.62  Aligned_cols=156  Identities=14%  Similarity=0.063  Sum_probs=98.3

Q ss_pred             ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669         70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------  119 (337)
Q Consensus        70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------  119 (337)
                      |+...+.+|    +++++++|.+.     .+.++||+.|..++ ..++++                              
T Consensus       131 gnpt~~aLE----~~lA~leg~e~-----ai~~~SG~aAi~~i-l~ll~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v~  200 (464)
T PLN02509        131 GNPTRDALE----SLLAKLDKADR-----AFCFTSGMAALSAV-THLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVK  200 (464)
T ss_pred             CCHHHHHHH----HHHHHHhCCCE-----EEEeCcHHHHHHHH-HHHhCCCCEEEEcCCchhhHHHHHHHHHHHCCeEEE
Confidence            566667888    47788999875     58889998775444 455543                              


Q ss_pred             ----------ccc---cccEEEEc-Cccc-ccccChHHHHHHhhhcCCeEEEeccccccccc--------eeeeec-c--
Q psy10669        120 ----------NNA---RFDFLSSG-TTCY-SRCLDYARFRQICDETDSIMFADMSHISGLIA--------GVKGVT-K--  173 (337)
Q Consensus       120 ----------~~a---~pklII~~-~S~~-~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~--------g~~~T~-~--  173 (337)
                                +.+   ++|+|++. +++. +...|+++|.++|+++|++++||+||..|+..        .++++. |  
T Consensus       201 ~vd~~d~e~l~~ai~~~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~a~~~~~~pl~~gaDivv~S~tK~l  280 (464)
T PLN02509        201 RVNTTNLDEVAAAIGPQTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSIMSPVLSRPLELGADIVMHSATKFI  280 (464)
T ss_pred             EeCCCCHHHHHHhCCcCCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCccccccCChhhcCCcEEEecCcccc
Confidence                      111   25777775 3332 47788889999999999999999999999865        123322 2  


Q ss_pred             ------CCchhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CC
Q psy10669        174 ------TGEKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GY  241 (337)
Q Consensus       174 ------~Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~  241 (337)
                            .||++..   .+.+.+....  ...|+...|.-|++..  ..+  .....+.++..+|++++++.|.+. .+
T Consensus       281 ~G~gdv~gG~v~~~~~~l~~~~~~~~--~~~g~~l~p~~A~l~l--r~L--~tL~~R~~r~~~nA~~la~~L~~~p~V  352 (464)
T PLN02509        281 AGHSDVMAGVLAVKGEKLAKEVYFLQ--NSEGSGLAPFDCWLCL--RGI--KTMALRIEKQQENARKIAMYLSSHPRV  352 (464)
T ss_pred             cCCCccceeEEEeccHHHHHHHHHHH--HhcCCCcCHHHHHHHH--hhh--hhHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence                  1566653   2333322110  1112333333343332  233  234678999999999999999873 44

>PRK01533 histidinol-phosphate aminotransferase; Validated

Probab=98.63  E-value=9.7e-06  Score=79.14  Aligned_cols=226  Identities=14%  Similarity=0.112  Sum_probs=140.6

Q ss_pred             cceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-ch
Q psy10669         31 NGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SP  107 (337)
Q Consensus        31 ~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~  107 (337)
                      ..|.|-..||-.  +|.+++++...+.+.  ..||..    |   ..+    .++.+++++|++.    -+|.+++| ++
T Consensus        30 ~~i~l~~nen~~~~~~~v~~a~~~~~~~~--~~Yp~~----g---~~~----Lr~aia~~~~~~~----~~I~vt~Gs~e   92 (366)
T PRK01533         30 SFVKLASNENPFGCSPRVLDELQKSWLDH--ALYPDG----G---ATT----LRQTIANKLHVKM----EQVLCGSGLDE   92 (366)
T ss_pred             ceEEeCCCCCCCCCCHHHHHHHHHHHHhc--CcCCCC----C---HHH----HHHHHHHHhCCCc----ceEEECCCHHH
Confidence            457888888876  889999987654321  012211    1   122    3467788899886    36888899 56


Q ss_pred             hHHHHHHhhCCc--------------------------------------cc--c---cccEEEEc-Ccc-cccccChHH
Q psy10669        108 ANFAVCEKALPT--------------------------------------NN--A---RFDFLSSG-TTC-YSRCLDYAR  142 (337)
Q Consensus       108 AN~~v~~aLl~~--------------------------------------~~--a---~pklII~~-~S~-~~~~~d~~~  142 (337)
                      +...++.+++++                                      .+  +   ++++|++. +.+ .+...+.++
T Consensus        93 ~i~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~d~~~l~~~~~~~~~~v~i~~P~NPTG~~~~~~~  172 (366)
T PRK01533         93 VIQIISRAVLKAGDNIVTAGATFPQYRHHAIIEGCEVKEVALNNGVYDLDEISSVVDNDTKIVWICNPNNPTGTYVNDRK  172 (366)
T ss_pred             HHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCEEEEeecCCCCcCHHHHHHHhCcCCcEEEEeCCCCCCCCCcCHHH
Confidence            777777888654                                      01  1   25766655 433 257788877


Q ss_pred             HHHHhh---hcCCeEEEecccccccc---------c--------eeeeec-c-------CCchhhh--hHHHHHhhccCC
Q psy10669        143 FRQICD---ETDSIMFADMSHISGLI---------A--------GVKGVT-K-------TGEKILY--DYEEKINNAVFP  192 (337)
Q Consensus       143 l~eia~---~~ga~l~vD~AH~~Gli---------~--------g~~~T~-~-------~Gg~i~~--~l~~~i~~~~~p  192 (337)
                      +.+|++   ++ .++++|+++. .+.         .        .+..|. |       +-|++++  ++.+.+.....|
T Consensus       173 l~~l~~~~~~~-~~~iiDe~y~-~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~~~~~~~l~~~~~~  250 (366)
T PRK01533        173 LTQFIEGISEN-TLIVIDEAYY-EYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGHEELIEKLNVVRLP  250 (366)
T ss_pred             HHHHHHhCCCC-CEEEEEccHH-HhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCCHHHHHHHHHhcCC
Confidence            776654   44 4788899974 221         1        122332 2       1266665  566666654333


Q ss_pred             CCCCCCcHHHHHHHHHHHHHHhchhh-HHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHH
Q psy10669        193 SLQGGPHNHAIGAIATAMLQAQSDEF-KSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVL  271 (337)
Q Consensus       193 ~~~g~~~~~~iaala~a~~e~~~~~~-~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L  271 (337)
                         .+.+.....++..++.   ..++ ++.++...++.+.+.+.|.+.|+++..  ++..-+++.+.    ++.++.+.|
T Consensus       251 ---~~~~~~~q~aa~~~l~---~~~~~~~~~~~~~~~r~~~~~~l~~~g~~~~~--~~~nf~~~~~~----~~~~~~~~l  318 (366)
T PRK01533        251 ---FNVSSLAQKAATIAFG---DDEFIEEIVRVNTEGLRQYESFCKENEIPFYQ--SQTNFIFLPVE----NGGEIYEAC  318 (366)
T ss_pred             ---CCcCHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHhCCCccCC--CcCcEEEEeCC----CHHHHHHHH
Confidence               2445555555555553   2233 455677777888888888888988765  45556777763    356788888


Q ss_pred             hhcCceeccCc-ccchh
Q psy10669        272 EEIAIACNKNT-GISLA  287 (337)
Q Consensus       272 ~~~gI~v~~~~-girig  287 (337)
                      .+.||.|.... +|||+
T Consensus       319 ~~~GI~Vr~~~~~iRis  335 (366)
T PRK01533        319 AHAGFIIRPFPNGVRIT  335 (366)
T ss_pred             HHCCcEEccCCCceEEe
Confidence            89999998643 78884

>TIGR00461 gcvP glycine dehydrogenase (decarboxylating)

Probab=98.63  E-value=6.9e-07  Score=95.79  Aligned_cols=201  Identities=12%  Similarity=0.116  Sum_probs=127.3

Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCC---------c--------------------------
Q psy10669         75 DEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALP---------T--------------------------  119 (337)
Q Consensus        75 ~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~---------~--------------------------  119 (337)
                      .+++...++-+++++|.+.    +.+++.+|++++.+.+.++-.         +                          
T Consensus       529 lq~i~elq~~l~eltGmd~----~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPasa~~~G~~Vv~  604 (939)
T TIGR00461       529 QELIAQLEKWLCSITGFDA----ISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPASAAMAGMQVVP  604 (939)
T ss_pred             HHHHHHHHHHHHHHHCCCC----cccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHHHHHCCCEEEE
Confidence            3566666678999999996    689999999999865555521         1                          


Q ss_pred             ----------------cc----ccccEEEEc-CcccccccC-hHHHHHHhhhcCCeEEEeccccccccc----------e
Q psy10669        120 ----------------NN----ARFDFLSSG-TTCYSRCLD-YARFRQICDETDSIMFADMSHISGLIA----------G  167 (337)
Q Consensus       120 ----------------~~----a~pklII~~-~S~~~~~~d-~~~l~eia~~~ga~l~vD~AH~~Gli~----------g  167 (337)
                                      ..    .++++|+++ +|.++...| +++|.++||++|+.++||.||..++..          .
T Consensus       605 V~~d~~G~iDle~L~~~i~~~~~~taaV~iT~pst~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~l~~Pg~~GaDi  684 (939)
T TIGR00461       605 VNCDQDGNIDLVDLKNKAEQHGDELAAVMVTYPSTHGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVGLTSPGDLGADV  684 (939)
T ss_pred             eccCCCCCcCHHHHHHHHhhcCCceEEEEEEeCCcCceecccHHHHHHHHHHcCCEEEEEecChhhCCCCCCccccCCCE
Confidence                            11    125677766 677775545 999999999999999999999876655          1


Q ss_pred             eeeeccC--------C----chhhh--hHHHHHhhc-c--------CC---CCCCC-CcHH-HHHHHHHHHHHHh-chhh
Q psy10669        168 VKGVTKT--------G----EKILY--DYEEKINNA-V--------FP---SLQGG-PHNH-AIGAIATAMLQAQ-SDEF  218 (337)
Q Consensus       168 ~~~T~~~--------G----g~i~~--~l~~~i~~~-~--------~p---~~~g~-~~~~-~iaala~a~~e~~-~~~~  218 (337)
                      ++++.||        |    |++..  ++...+-.. +        .+   +..++ +... .++-.+.....++ ...+
T Consensus       685 ~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~~v~~t~d~~greq~Iga~s~~~~g~a~~~l~a~~yi~~lG~~GL  764 (939)
T TIGR00461       685 CHLNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKHDVVSMITGIGGSKSIGSVSAAPYGSASILPISWMYIKMMGNEGL  764 (939)
T ss_pred             EEecCCccCCCCCCCCCCCeEEEEEhhhchhhcCCCcccccccCCCCccccccccccccCcHHHHHHHHHHHHHHCHHHH
Confidence            3443322        1    45543  232211100 0        00   01111 1112 1222222222222 3446


Q ss_pred             HHHHHHHHHHHHHHHHHHHhCCCEEecCC---CCCeEEEEEecC----CCcchHHHHHHHhhcCceecc
Q psy10669        219 KSYQAQVKANASHLSDEMIKRGYHVVTGG---TDVHLILIDLRK----NKLTGSKVELVLEEIAIACNK  280 (337)
Q Consensus       219 ~~y~~~v~~na~~l~~~L~~~G~~v~~~~---t~~h~v~V~~~~----~~~~~~~~~~~L~~~gI~v~~  280 (337)
                      ++..++-+.||+||+++|.+ ++++...+   .--|-++++++.    .|....++.++|.++||....
T Consensus       765 ~~~a~~ailnAnYl~~rL~~-~~~~l~~~~~~~~~hEfv~~~~~~~~~~g~~~~dIakrL~d~G~hapt  832 (939)
T TIGR00461       765 PKASVVAILNANYMATRLKD-HYPILFVGTLKHVAHECILDLRPLKAKTGIEAIDVAKRLQDYGFHAPT  832 (939)
T ss_pred             HHHHHHHHHHHHHHHHHhhc-cCcccccCCCCceeEEEEEeccchhhhcCCCHHHHHHHHHhCCeeccc
Confidence            77888899999999999987 78877632   234678888873    356788899999999997643

This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.

>PRK05764 aspartate aminotransferase; Provisional

Probab=98.62  E-value=1.4e-05  Score=78.18  Aligned_cols=244  Identities=16%  Similarity=0.095  Sum_probs=133.9

Q ss_pred             ccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCC--CCCCCcceeecCCC
Q psy10669         30 INGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNL--DPEQWGCNVQPYSG  105 (337)
Q Consensus        30 ~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~--~~~~~~~~v~~~Sg  105 (337)
                      .+-++|-..++-.  ++.+.+++...+.+. ...      |.......++.....+.+.+.+|.  +.    -++.+++|
T Consensus        31 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~------Y~~~~g~~~lr~~ia~~~~~~~~~~~~~----~~i~~~~g   99 (393)
T PRK05764         31 RDVISLGAGEPDFDTPEHIKEAAIEALDDG-KTK------YTPAAGIPELREAIAAKLKRDNGLDYDP----SQVIVTTG   99 (393)
T ss_pred             CCEEEeCCCCCCCCCCHHHHHHHHHHHhcC-CCC------cCCCCChHHHHHHHHHHHHHHhCCCCCH----HHEEEeCC
Confidence            4456666555555  588888887654431 111      222222344543222333333343  32    24677777


Q ss_pred             -chhHHHHHHhhCCc--------------------------------------------ccc--cccEEEEc-Ccc-ccc
Q psy10669        106 -SPANFAVCEKALPT--------------------------------------------NNA--RFDFLSSG-TTC-YSR  136 (337)
Q Consensus       106 -t~AN~~v~~aLl~~--------------------------------------------~~a--~pklII~~-~S~-~~~  136 (337)
                       ++|+..++.+++++                                            +..  ++++|++. +++ .+.
T Consensus       100 ~~~a~~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~NPtG~  179 (393)
T PRK05764        100 AKQALYNAFMALLDPGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFKLTVEQLEAAITPKTKALILNSPSNPTGA  179 (393)
T ss_pred             cHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCCEEEEEecCcccCCcCCHHHHHHhhCccceEEEEECCCCCCCc
Confidence             57887777887643                                            000  14666654 322 234


Q ss_pred             cc---ChHHHHHHhhhcCCeEEEeccccccccc------------------eeeeec-c----CC---chhhh--hHHHH
Q psy10669        137 CL---DYARFRQICDETDSIMFADMSHISGLIA------------------GVKGVT-K----TG---EKILY--DYEEK  185 (337)
Q Consensus       137 ~~---d~~~l~eia~~~ga~l~vD~AH~~Gli~------------------g~~~T~-~----~G---g~i~~--~l~~~  185 (337)
                      ..   ++++|.++|+++|+++++|++|......                  .+.++. |    .|   |+++.  ++.+.
T Consensus       180 ~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~i~~~~~~~~~  259 (393)
T PRK05764        180 VYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGWRLGYAAGPKELIKA  259 (393)
T ss_pred             ccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCccceeEEEecCHHHHHH
Confidence            43   4667778899999999999997532211                  011221 2    23   66654  46555


Q ss_pred             HhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCCC---
Q psy10669        186 INNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKNK---  261 (337)
Q Consensus       186 i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~~---  261 (337)
                      +.....+. .++++.....+....+... ....++.+++..++.+.+.+.|.+. |+++..+ ..+..+++++....   
T Consensus       260 ~~~~~~~~-~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~-~g~~~~~~~~~~~~~~~  336 (393)
T PRK05764        260 MSKLQSHS-TSNPTSIAQYAAVAALNGP-QDEVEEMRQAFEERRDLMVDGLNEIPGLECPKP-EGAFYVFPNVSKLLGKS  336 (393)
T ss_pred             HHHHHhhc-ccCCChHHHHHHHHHHcCC-hHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCC-CcceEEEEecccccccc
Confidence            55432222 2233444444444444321 2334567778888999999999987 8887642 33455667775421   


Q ss_pred             -cchHHHHHH-HhhcCceeccCc------ccchh
Q psy10669        262 -LTGSKVELV-LEEIAIACNKNT------GISLA  287 (337)
Q Consensus       262 -~~~~~~~~~-L~~~gI~v~~~~------girig  287 (337)
                       .+..++.+. +++.||.+.+..      .|||+
T Consensus       337 ~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~vRis  370 (393)
T PRK05764        337 ITDSLEFAEALLEEAGVAVVPGIAFGAPGYVRLS  370 (393)
T ss_pred             cCCHHHHHHHHHHhCCEEEccccccCCCCEEEEE
Confidence             123565555 466899987632      46765

>PRK08861 cystathionine gamma-synthase; Provisional

Probab=98.62  E-value=6.9e-07  Score=88.02  Aligned_cols=155  Identities=14%  Similarity=0.100  Sum_probs=105.6

Q ss_pred             ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669         70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------  119 (337)
Q Consensus        70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------  119 (337)
                      |+...+.+|    ++++++.|.+.     .+.+.||+.|+..++.+++++                              
T Consensus        51 ~npt~~~Le----~~lA~leg~e~-----ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~  121 (388)
T PRK08861         51 GNPNRGLLE----QTLSELESGKG-----AVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQ  121 (388)
T ss_pred             CCchHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCCeEEE
Confidence            456677888    58899999764     566777789988888888654                              


Q ss_pred             ----------ccc---cccEEEEc-Ccc-cccccChHHHHHHhhhcCCeEEEeccccccccc-----e----eeeecc--
Q psy10669        120 ----------NNA---RFDFLSSG-TTC-YSRCLDYARFRQICDETDSIMFADMSHISGLIA-----G----VKGVTK--  173 (337)
Q Consensus       120 ----------~~a---~pklII~~-~S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----g----~~~T~~--  173 (337)
                                +.+   ++|+|++. +++ .+...|+++|.++|+++|+++++|++|..|+.-     |    +.|++|  
T Consensus       122 ~vd~~d~e~l~~~i~~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvDea~~~~~~~~pl~~GaDivv~S~tK~l  201 (388)
T PRK08861        122 FVDQSDAAALDAALAKKPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVDNTFLTPVLQKPLELGADFVIHSTTKYI  201 (388)
T ss_pred             EECCCCHHHHHHhcCcCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCccccccCCCcccCCCEEEeecceec
Confidence                      001   27888876 433 358999999999999999999999999988654     1    233333  


Q ss_pred             ------CCchhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC
Q psy10669        174 ------TGEKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR  239 (337)
Q Consensus       174 ------~Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~  239 (337)
                            .||++++   ++.+++... . ...|....|.-+.  ..+.-+  ....-++++..+||..+++.|++.
T Consensus       202 ~G~~d~~gG~i~~~~~~~~~~~~~~-~-~~~G~~~~p~~a~--l~~rgl--~Tl~lR~~~~~~~a~~~a~~L~~~  270 (388)
T PRK08861        202 NGHSDVIGGVLITKTKEHAEELAWW-G-NCIGATGTPFDSY--MTLRGI--RTLGARMRVHEESAQQILAYLQTQ  270 (388)
T ss_pred             cCCCcceeEEEEecHHHHHHHHHHH-H-hccCCCCChHHHH--HHHhcC--CCHHHHHHHHHHHHHHHHHHHHhC
Confidence                  2576654   355555422 1 1223333333333  223333  346788999999999999999984

>PRK08114 cystathionine beta-lyase; Provisional

Probab=98.61  E-value=5e-07  Score=89.15  Aligned_cols=192  Identities=11%  Similarity=0.048  Sum_probs=125.1

Q ss_pred             ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669         70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------  119 (337)
Q Consensus        70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------  119 (337)
                      |+...+.+|    ++++++-|.++     ++.|.||+.|+.+++.+++++                              
T Consensus        60 ~nPt~~~le----~~la~LEg~~~-----a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~  130 (395)
T PRK08114         60 GTLTHFSLQ----EAMCELEGGAG-----CALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTT  130 (395)
T ss_pred             CChhHHHHH----HHHHHHhCCCe-----EEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEE
Confidence            667778898    57889999886     788999999988888898765                              


Q ss_pred             ----------ccc---cccEEEEcCccc--ccccChHHHHHHhhhcC--CeEEEeccccccccc-----e----eeeecc
Q psy10669        120 ----------NNA---RFDFLSSGTTCY--SRCLDYARFRQICDETD--SIMFADMSHISGLIA-----G----VKGVTK  173 (337)
Q Consensus       120 ----------~~a---~pklII~~~S~~--~~~~d~~~l~eia~~~g--a~l~vD~AH~~Gli~-----g----~~~T~~  173 (337)
                                +.+   ++|+|++...++  ....|+++|.++|+++|  ++++||.+|.+|++-     |    +.+.+|
T Consensus       131 ~vd~~d~~~l~~~l~~~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~~~pl~~GaDivv~S~tK  210 (395)
T PRK08114        131 WFDPLIGADIAKLIQPNTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMIDNTWAAGVLFKALDFGIDISIQAGTK  210 (395)
T ss_pred             EECCCCHHHHHHhcCCCceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEECCCccccccCHHHcCCcEEEEcCcc
Confidence                      101   268998874333  37799999999999984  999999999999875     2    233333


Q ss_pred             --------CCchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC-CE
Q psy10669        174 --------TGEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG-YH  242 (337)
Q Consensus       174 --------~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G-~~  242 (337)
                              -+|.+..  ++.+.+....  ...|+...|--+.+.  +.-+  ....-++++..+||..+++.|++.. ++
T Consensus       211 yl~Ghsdv~~G~v~~~~~~~~~l~~~~--~~~G~~~~p~~a~l~--~rgl--~TL~lR~~~~~~na~~va~~L~~hp~V~  284 (395)
T PRK08114        211 YLVGHSDAMIGTAVANARCWEQLRENS--YLMGQMVDADTAYMT--SRGL--RTLGVRLRQHEESSLKVAEWLAEHPEVA  284 (395)
T ss_pred             cccCCCcceeEEEEcCHHHHHHHHHHH--HhccCCCCHHHHHHH--HcCC--CcHHHHHHHHHHHHHHHHHHHHcCCCEe
Confidence                    2465543  3444444321  123454445555443  1222  2456789999999999999999842 22


Q ss_pred             -EecCCCC---------------CeEEEEEecCCCcchHHHHHHHhhcCce
Q psy10669        243 -VVTGGTD---------------VHLILIDLRKNKLTGSKVELVLEEIAIA  277 (337)
Q Consensus       243 -v~~~~t~---------------~h~v~V~~~~~~~~~~~~~~~L~~~gI~  277 (337)
                       |..++-.               .-++.+.++. +.+...+.+.++...+.
T Consensus       285 ~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~~-~~~~~~~~~f~~~l~l~  334 (395)
T PRK08114        285 RVNHPALPGCKGHEFWKRDFTGSSGLFSFVLKK-KLTDEQLANYLDNFSLF  334 (395)
T ss_pred             EEECCCCCCCccHHHHHhhCCCCceEEEEEecC-cccHHHHHHHHHhCCcc
Confidence             3333222               2356666642 11245566777765543

>PRK07050 cystathionine beta-lyase; Provisional

Probab=98.61  E-value=4.5e-07  Score=89.53  Aligned_cols=155  Identities=13%  Similarity=0.027  Sum_probs=102.5

Q ss_pred             ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669         70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------  119 (337)
Q Consensus        70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------  119 (337)
                      |+....++|    +++++++|.++     .+.+.||+.|+..++.+++++                              
T Consensus        63 ~~pt~~~Le----~~lA~l~g~~~-----~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~  133 (394)
T PRK07050         63 ATPTSLALA----QRLAEIEGGRH-----ALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFGITVR  133 (394)
T ss_pred             CCHHHHHHH----HHHHHHhCCCe-----EEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHhcCeEEE
Confidence            666677888    57889999875     567788899999989998765                              


Q ss_pred             ----------ccc---cccEEEEc-Ccc-cccccChHHHHHHhhhcCCeEEEeccccccccc-----e----eeeecc--
Q psy10669        120 ----------NNA---RFDFLSSG-TTC-YSRCLDYARFRQICDETDSIMFADMSHISGLIA-----G----VKGVTK--  173 (337)
Q Consensus       120 ----------~~a---~pklII~~-~S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----g----~~~T~~--  173 (337)
                                +.+   ++|+|++. +++ .....|+++|.++|+++|+++++|++|..|+.-     |    +.+.+|  
T Consensus       134 ~vd~~~~~~l~~~i~~~tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD~a~a~~~~~~~l~~GaDi~v~S~tK~~  213 (394)
T PRK07050        134 FYDPLIGAGIADLIQPNTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNTYSAGLAFKPFEHGVDISVQALTKYQ  213 (394)
T ss_pred             EECCCCHHHHHHhcCCCCeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEECCcccccccCHHHcCCeEEEEECCcee
Confidence                      001   26888875 333 247778899999999999999999999988753     2    122222  


Q ss_pred             ------CCchhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC
Q psy10669        174 ------TGEKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR  239 (337)
Q Consensus       174 ------~Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~  239 (337)
                            .||.+++   ++.+++..... . .|....+. .+. .++..+  +....+.++..+|++.+++.|.+.
T Consensus       214 ~g~~~~~gG~v~~~~~~~~~~~~~~~~-~-~G~~~~~~-~a~-l~lr~l--~tl~~Rl~~~~~~a~~la~~L~~~  282 (394)
T PRK07050        214 SGGSDVLMGATITADAELHAKLKLARM-R-LGIGVSAD-DCS-LVLRGL--PSLQVRLAAHDRSALEVAEWLKAR  282 (394)
T ss_pred             cCCCCeeEEEEEECCHHHHHHHHHHHH-h-cCCCCCHH-HHH-HHHcCC--CcHHHHHHHHHHHHHHHHHHHHhC
Confidence                  1555543   46665553311 1 12222222 221 222223  346678999999999999999984

>PRK08912 hypothetical protein; Provisional

Probab=98.61  E-value=1.4e-05  Score=78.15  Aligned_cols=154  Identities=16%  Similarity=0.149  Sum_probs=90.4

Q ss_pred             ccEEEEc-Ccc-cccccCh---HHHHHHhhhcCCeEEEeccccccccc-----------------eeeeec-c----CC-
Q psy10669        124 FDFLSSG-TTC-YSRCLDY---ARFRQICDETDSIMFADMSHISGLIA-----------------GVKGVT-K----TG-  175 (337)
Q Consensus       124 pklII~~-~S~-~~~~~d~---~~l~eia~~~ga~l~vD~AH~~Gli~-----------------g~~~T~-~----~G-  175 (337)
                      +|+|++. +.+ .+...+.   ++|.++|+++|+++++|+++.-....                 .+.+|. |    .| 
T Consensus       160 ~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~Gl  239 (387)
T PRK08912        160 TKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGW  239 (387)
T ss_pred             ceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCc
Confidence            5666665 322 2456664   45667889999999999998432111                 122332 2    23 


Q ss_pred             --chhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCe
Q psy10669        176 --EKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVH  251 (337)
Q Consensus       176 --g~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h  251 (337)
                        |+++.  ++.+.+.....+...+.+ ++..+++..++... ....++.++++.++.+++.+.|.+.|+++.. ...+.
T Consensus       240 RiG~~~~~~~~~~~l~~~~~~~~~~~~-~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~g~~  316 (387)
T PRK08912        240 KVGFVCAAPPLLRVLAKAHQFLTFTTP-PNLQAAVAYGLGKP-DDYFEGMRADLARSRDRLAAGLRRIGFPVLP-SQGTY  316 (387)
T ss_pred             eeEEEecCHHHHHHHHHHHhhccccCC-hHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHhCCCcccC-CCcce
Confidence              66655  455555433222222222 22333344444321 1233567788889999999999999988764 23456


Q ss_pred             EEEEEecCC--CcchHHHHHHH-hhcCceecc
Q psy10669        252 LILIDLRKN--KLTGSKVELVL-EEIAIACNK  280 (337)
Q Consensus       252 ~v~V~~~~~--~~~~~~~~~~L-~~~gI~v~~  280 (337)
                      .+++++...  ..+..++.+.| ++.||.+.+
T Consensus       317 ~l~~~l~~~~~~~~~~~~~~~l~~~~gV~v~p  348 (387)
T PRK08912        317 FLTVDLAPLGLAEDDVAFCRRLVEEAGVAAIP  348 (387)
T ss_pred             EEEecccccCCCCCHHHHHHHHHhcCCEEEec
Confidence            777888652  23555666665 678998876

>PRK04870 histidinol-phosphate aminotransferase; Provisional

Probab=98.61  E-value=2.1e-05  Score=76.13  Aligned_cols=227  Identities=15%  Similarity=0.104  Sum_probs=138.9

Q ss_pred             ccceeeeccCCC--CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCc-
Q psy10669         30 INGIELIASENF--TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGS-  106 (337)
Q Consensus        30 ~~~i~l~asen~--~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt-  106 (337)
                      ..-|.|-..||-  .+|.+++++...+......+|+..    |   ..++    ++.+++++|.+..   .+|.+++|+ 
T Consensus        26 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~----~---~~~l----r~~ia~~~~~~~~---~~I~~t~G~~   91 (356)
T PRK04870         26 TGMVKLDAMENPYRLPAELRAELGERLAEVALNRYPDP----R---AAAL----KAALRAAMGVPAG---ADVLLGNGSD   91 (356)
T ss_pred             CCceeCcCCCCCCCCCHHHHHHHHHHhhccccccCCCC----C---HHHH----HHHHHHHhCcCCC---CcEEEcCCHH
Confidence            456777677774  489999999865432111122211    1   1233    4677889987642   268889996 


Q ss_pred             hhHHHHHHhhCCc------------------------------------------c-c--ccccEEEEcCccc--ccccC
Q psy10669        107 PANFAVCEKALPT------------------------------------------N-N--ARFDFLSSGTTCY--SRCLD  139 (337)
Q Consensus       107 ~AN~~v~~aLl~~------------------------------------------~-~--a~pklII~~~S~~--~~~~d  139 (337)
                      ++...++.+++++                                          + .  .++|+|++..-.+  +...+
T Consensus        92 ~~i~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~~~~~~~~~v~l~~p~NPtG~~~~  171 (356)
T PRK04870         92 ELIQLLALACAKPGATVLAPEPGFVMYRMSAKLAGLEFVGVPLTADFTLDLPAMLAAIAEHRPALVFLAYPNNPTGNLFD  171 (356)
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCHHHHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCCEEEEcCCCCCCCCCCC
Confidence            4656666677553                                          0 0  1368887763344  58889


Q ss_pred             hHHHHHHhhhcCCeEEEeccccc--c--ccc--------eeeeec-c------CCchhhh--hHHHHHhhccCCCCCCCC
Q psy10669        140 YARFRQICDETDSIMFADMSHIS--G--LIA--------GVKGVT-K------TGEKILY--DYEEKINNAVFPSLQGGP  198 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~~--G--li~--------g~~~T~-~------~Gg~i~~--~l~~~i~~~~~p~~~g~~  198 (337)
                      .+++.+|++..+.++++|+++..  +  ...        .+..+. |      +-|+++.  ++.+.+.....+.   +.
T Consensus       172 ~~~~~~i~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~GlRiG~~i~~~~~i~~~~~~~~~~---~~  248 (356)
T PRK04870        172 DADVERIIEAAPGLVVVDEAYQPFAGDSWLPRLARFPNLLVMRTVSKLGLAGLRLGYLAGHPAWIAELDKVRPPY---NV  248 (356)
T ss_pred             HHHHHHHHHHCCCEEEEECCchhhcCcchHHHHhhCCCEEEEecchhhhhHHHhhhhhhCCHHHHHHHHHccCCC---cC
Confidence            99999998877899999999742  1  111        112222 2      1255554  4666666543332   23


Q ss_pred             cHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCce
Q psy10669        199 HNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIA  277 (337)
Q Consensus       199 ~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~  277 (337)
                      +....++...++.+.  ..+++.++++.++.+++.+.|.+. |+.+..  .....+++.+.    +..++.+.|.+.||.
T Consensus       249 ~~~~q~~a~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~~~~~~~~~~~----~~~~~~~~l~~~gI~  320 (356)
T PRK04870        249 NVLTQATALFALEHV--DVLDAQAAQLRAERTRLAAALAALPGVTVFP--SAANFILVRVP----DAAAVFDGLKTRGVL  320 (356)
T ss_pred             CHHHHHHHHHHHhCH--HHHHHHHHHHHHHHHHHHHHHHhCCCcEECC--CCCeEEEEECC----CHHHHHHHHHHCCEE
Confidence            333333333333321  235677888889999999999885 887654  34446677664    456788889999999


Q ss_pred             eccC
Q psy10669        278 CNKN  281 (337)
Q Consensus       278 v~~~  281 (337)
                      +.+.
T Consensus       321 v~~~  324 (356)
T PRK04870        321 VKNL  324 (356)
T ss_pred             EEEC
Confidence            9753

>PRK00451 glycine dehydrogenase subunit 1; Validated

Probab=98.61  E-value=3.7e-06  Score=84.02  Aligned_cols=189  Identities=14%  Similarity=0.102  Sum_probs=113.9

Q ss_pred             HHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHhhC-Cc----------------------------------c----
Q psy10669         81 AQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEKAL-PT----------------------------------N----  120 (337)
Q Consensus        81 ~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~aLl-~~----------------------------------~----  120 (337)
                      .++.+++++|++.    .++.+++| +.+..+++.++. .+                                  .    
T Consensus       117 ~~~~la~l~g~~~----~~v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~  192 (447)
T PRK00451        117 YQTMICELTGMDV----ANASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYEDGVT  192 (447)
T ss_pred             HHHHHHHHhCCCc----ceEEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCCCCC
Confidence            3457899999987    36777777 555666666763 22                                  0    


Q ss_pred             ----cc-----cccEEEEc-CcccccccChHHHHHHhhhcCCeEEE--eccccccccc--------eeeee---------
Q psy10669        121 ----NA-----RFDFLSSG-TTCYSRCLDYARFRQICDETDSIMFA--DMSHISGLIA--------GVKGV---------  171 (337)
Q Consensus       121 ----~a-----~pklII~~-~S~~~~~~d~~~l~eia~~~ga~l~v--D~AH~~Gli~--------g~~~T---------  171 (337)
                          +.     ++++|++. ++..+...|+++|.++|+++|++++|  |. +..|++.        .++++         
T Consensus       193 d~~~l~~~i~~~t~~v~l~~pn~tG~v~~l~~I~~~a~~~~~~~iv~~d~-~~~g~~~~~~~~~~D~~~~s~~k~~~~~~  271 (447)
T PRK00451        193 DLEALEAAVDDDTAAVVVQYPNFFGVIEDLEEIAEIAHAGGALFIVGVDP-VSLGLLKPPGEYGADIVVGEGQPLGIPLS  271 (447)
T ss_pred             CHHHHHHhcCCCeEEEEEECCCCCCeeCCHHHHHHHHHHCCCEEEEEcCh-HHhccCCCcccCCCCEEEECCCcCCCCCC
Confidence                11     15666665 44457888999999999999999998  53 3556552        12222         


Q ss_pred             --ccCCchhhh--hHHHHHhhc-----------------------cCCCCCCCCcHH---HHH--HHHHHHHHHhchhhH
Q psy10669        172 --TKTGEKILY--DYEEKINNA-----------------------VFPSLQGGPHNH---AIG--AIATAMLQAQSDEFK  219 (337)
Q Consensus       172 --~~~Gg~i~~--~l~~~i~~~-----------------------~~p~~~g~~~~~---~ia--ala~a~~e~~~~~~~  219 (337)
                        ++..|++..  ++.+.+.+.                       ......++.+..   .+.  +.+.++..+.+..++
T Consensus       272 ~~Gpg~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~  351 (447)
T PRK00451        272 FGGPYLGFFATRKKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLLGPEGLR  351 (447)
T ss_pred             CCCCCchHHHhhHHHHhhCCCCEeeeecccCCCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHHCHHHHH
Confidence              233466644  444432100                       000112222221   122  222234444445568


Q ss_pred             HHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCcee
Q psy10669        220 SYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIAC  278 (337)
Q Consensus       220 ~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v  278 (337)
                      +.+++..+++++|.++|.+. |+++.. +..-+.+.++++   .+..++.+.|.+.||.+
T Consensus       352 ~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~~~~~~~v~~~---~~~~~~~~~L~~~gi~~  407 (447)
T PRK00451        352 ELAEQNHQKAHYLAERLAEIGGVELFD-GPFFNEFVVRLP---KPAEEVNEALLEKGILG  407 (447)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCEEecC-CCeEEEEEEecC---CCHHHHHHHHHhcCCCC
Confidence            88999999999999999986 688763 222233445553   25678888888888764

>PRK05957 aspartate aminotransferase; Provisional

Probab=98.61  E-value=2.4e-05  Score=76.82  Aligned_cols=254  Identities=13%  Similarity=0.058  Sum_probs=138.8

Q ss_pred             HHHHHHHHHHHhhcccceeeeccCC-C-CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCC-
Q psy10669         16 PELYSLIKKEKHRQINGIELIASEN-F-TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLD-   92 (337)
Q Consensus        16 ~~~~~~~~~e~~rq~~~i~l~asen-~-~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~-   92 (337)
                      +.++.++.+-..+-...+.|-..++ + .++.+.+|+...+.+.      ....|....-..++-...++.+++++|.+ 
T Consensus        13 ~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~a~~~~~~~~------~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~   86 (389)
T PRK05957         13 SPIIPVVGQLIRENPGTISLGQGVVSYPPPPEAIEALNNFLANP------ENHKYQAVQGIPPLLEAITQKLQQDNGIEL   86 (389)
T ss_pred             CcHHHHHHHHHHhCCCeEEccCCCCCCCCCHHHHHHHHHHHhCC------CCCCCCCCCCCHHHHHHHHHHHHHHhCCCC
Confidence            4444443333333234576666554 3 5888888887654321      11112222222233333445777888864 


Q ss_pred             -CCCCcceeecCCCc-hhHHHHHHhhCCc-----------------------------------------cc---ccccE
Q psy10669         93 -PEQWGCNVQPYSGS-PANFAVCEKALPT-----------------------------------------NN---ARFDF  126 (337)
Q Consensus        93 -~~~~~~~v~~~Sgt-~AN~~v~~aLl~~-----------------------------------------~~---a~pkl  126 (337)
                       ++   .++.+++|+ ++...++.+++++                                         +.   .++|+
T Consensus        87 ~~~---~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~kl  163 (389)
T PRK05957         87 NNE---QAIVVTAGSNMAFMNAILAITDPGDEIILNTPYYFNHEMAITMAGCQPILVPTDDNYQLQPEAIEQAITPKTRA  163 (389)
T ss_pred             CCC---CeEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEeecCCCCCcCHHHHHHhcCcCceE
Confidence             12   258888885 6776667777643                                         10   12688


Q ss_pred             EEEcCccc--ccccC---hHHHHHHhhhcCCeEEEeccccc----c--ccc-----------eeeeec-c----CC---c
Q psy10669        127 LSSGTTCY--SRCLD---YARFRQICDETDSIMFADMSHIS----G--LIA-----------GVKGVT-K----TG---E  176 (337)
Q Consensus       127 II~~~S~~--~~~~d---~~~l~eia~~~ga~l~vD~AH~~----G--li~-----------g~~~T~-~----~G---g  176 (337)
                      |++..-.+  +...|   +++|.++|+++|+++++|+++.-    +  ...           .++.|. |    .|   |
T Consensus       164 v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG  243 (389)
T PRK05957        164 IVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIG  243 (389)
T ss_pred             EEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccceeE
Confidence            87763333  46666   67778889999999999999641    1  111           112222 2    13   5


Q ss_pred             hhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CC-EEecCCCCCeE
Q psy10669        177 KILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GY-HVVTGGTDVHL  252 (337)
Q Consensus       177 ~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~-~v~~~~t~~h~  252 (337)
                      +++.  ++.+.+.....+...+.+. +...++..++.+- ...+++.++++.++.+.+.+.|.+. |+ .+.. ...+..
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~q~~~~~~l~~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~-~~gg~~  320 (389)
T PRK05957        244 YMVIPIHLLEAIKKIQDTILICPPV-VSQYAALGALQVG-KSYCQQHLPEIAQVRQILLKSLGQLQDRCTLHP-ANGAFY  320 (389)
T ss_pred             EEecCHHHHHHHHHHHhhcccCCCc-HHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHhcCCCccccC-CCeeEE
Confidence            5544  5666665443322222232 2333323333221 1123566777888888888988874 43 3332 112345


Q ss_pred             EEEEecCCCcchHHHHHHHh-hcCceeccCc
Q psy10669        253 ILIDLRKNKLTGSKVELVLE-EIAIACNKNT  282 (337)
Q Consensus       253 v~V~~~~~~~~~~~~~~~L~-~~gI~v~~~~  282 (337)
                      +++.+.. +++..++.+.|. +.||.+.+-.
T Consensus       321 ~~~~~~~-~~~~~~~~~~l~~~~gv~v~pg~  350 (389)
T PRK05957        321 CFLKVNT-DLNDFELVKQLIREYRVAVIPGT  350 (389)
T ss_pred             EEEeCCC-CCChHHHHHHHHHHCCEEEccch
Confidence            6677643 557777777774 6899998743

>KOG1368|consensus

Probab=98.61  E-value=1.1e-06  Score=81.84  Aligned_cols=214  Identities=18%  Similarity=0.211  Sum_probs=145.9

Q ss_pred             CCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc---------------------
Q psy10669         61 GLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT---------------------  119 (337)
Q Consensus        61 g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~---------------------  119 (337)
                      ..-|.--|+--....+||    ++.+++||.|.     .+..+|||..|+..+..=|..                     
T Consensus        45 A~vgDdVyGeD~tt~rLE----~~vA~l~GKEA-----gLFv~SGTmgNllaIm~Hc~~rg~eii~gd~~HI~~~E~gg~  115 (384)
T KOG1368|consen   45 ASVGDDVYGEDPTTNRLE----QRVAELFGKEA-----GLFVPSGTMGNLLAIMVHCHQRGSEIIVGDRAHIHRYEQGGI  115 (384)
T ss_pred             cccCcccccCCccHHHHH----HHHHHHhCccc-----eeeecccccccHHHHHHHhcCCCceEEeccchheeehhccCh
Confidence            344556666666778999    47799999995     788899999998888876542                     


Q ss_pred             ------------------------ccc----c-------ccEEEEcCcc--cc-cccChHH---HHHHhhhcCCeEEEec
Q psy10669        120 ------------------------NNA----R-------FDFLSSGTTC--YS-RCLDYAR---FRQICDETDSIMFADM  158 (337)
Q Consensus       120 ------------------------~~a----~-------pklII~~~S~--~~-~~~d~~~---l~eia~~~ga~l~vD~  158 (337)
                                              +.+    +       ++||.+.-+-  .+ ...|++.   ++++|+++|..|..|.
T Consensus       116 s~l~gv~~~tv~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DG  195 (384)
T KOG1368|consen  116 SQLAGVHVRTVKNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDG  195 (384)
T ss_pred             hhhccceeEeeeeCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHHHHhccCCeeecch
Confidence                                    111    1       4888886333  34 7788875   5578999999999998


Q ss_pred             ccccccc-c-e--------------eeee-c---cCCchhhh--hHHH---HHhhccCCCC-CCCCcHHHHHHHHHHHHH
Q psy10669        159 SHISGLI-A-G--------------VKGV-T---KTGEKILY--DYEE---KINNAVFPSL-QGGPHNHAIGAIATAMLQ  212 (337)
Q Consensus       159 AH~~Gli-~-g--------------~~~T-~---~~Gg~i~~--~l~~---~i~~~~~p~~-~g~~~~~~iaala~a~~e  212 (337)
                      |-..--- + |              +|.. +   |.|.+|++  ++.+   ..+++.=.|+ |++    .   ++++.+.
T Consensus       196 ARi~NAavasgV~vk~i~~~fDSVsiCLSKglgAPVGSViVG~k~FI~kA~~~RKalGGGmRQsG----v---LaaaaLv  268 (384)
T KOG1368|consen  196 ARIFNAAVASGVPVKKICSAFDSVSICLSKGLGAPVGSVIVGSKDFIDKARHFRKALGGGMRQSG----V---LAAAALV  268 (384)
T ss_pred             hhhhhHHHHcCCCHHHHHHhhhhhhhhhhccCCCCcccEEEccHHHHHHHHHHHHHhcCchhHHH----H---HHHHHHH
Confidence            8754211 1 1              1111 1   56777776  5544   4556643333 322    2   2222233


Q ss_pred             HhchhhHHHHHHHHHHHHHHHHHHHhCC-CEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCc--ccchhhh
Q psy10669        213 AQSDEFKSYQAQVKANASHLSDEMIKRG-YHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT--GISLAAE  289 (337)
Q Consensus       213 ~~~~~~~~y~~~v~~na~~l~~~L~~~G-~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~--girig~~  289 (337)
                      .++..++ ..++..+.|+.|++++...+ |++--.-.++.++.+.+...+++..++.+.|+++||.+-...  -+||...
T Consensus       269 al~~~~~-~L~~dHk~A~~lAe~~~~~~~i~v~v~a~etNiv~~~l~q~~~~~~~l~~~~~k~gi~lm~~~s~r~Rivlh  347 (384)
T KOG1368|consen  269 ALDENVP-LLRADHKRAKELAEYINTPEEIRVEVPAVETNIVNMVLCQARLTAEELCKFLEKNGILLMGGASRRIRIVLH  347 (384)
T ss_pred             HhhcchH-HHHHHHHHHHHHHHHhccccceeeecchhhcceeeeecccccCCHHHHHHHHHHCCeEEeeccccceEEEEE
Confidence            3333444 67788899999999999876 777654478889988888888999999999999999876422  4677665


Q ss_pred             hH
Q psy10669        290 IQ  291 (337)
Q Consensus       290 ~~  291 (337)
                      .+
T Consensus       348 ~Q  349 (384)
T KOG1368|consen  348 HQ  349 (384)
T ss_pred             Ee
Confidence            44

>PRK07777 aminotransferase; Validated

Probab=98.60  E-value=1.9e-05  Score=77.32  Aligned_cols=238  Identities=15%  Similarity=0.090  Sum_probs=129.3

Q ss_pred             cceeeeccCC--CCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCC-CCcceeecCCC-c
Q psy10669         31 NGIELIASEN--FTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPE-QWGCNVQPYSG-S  106 (337)
Q Consensus        31 ~~i~l~asen--~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~-~~~~~v~~~Sg-t  106 (337)
                      ..++|-...-  -.++.+.+++...+....       ..|....-..++.+...+.+.+.+|.+.. ++  +|.+++| +
T Consensus        25 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~-------~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~--~i~~t~G~~   95 (387)
T PRK07777         25 GAVNLGQGFPDEDGPPEMLEAAQEAIAGGV-------NQYPPGPGIPELRAAIAAQRRRRYGLEYDPDT--EVLVTVGAT   95 (387)
T ss_pred             CeEEccCCCCCCCCCHHHHHHHHHHHhcCC-------CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC--cEEEeCCcH
Confidence            4566553221  126667776655433211       12322222334443333455566776531 11  4677777 6


Q ss_pred             hhHHHHHHhhCCc--------------------------------c-----c-------c---cccEEEEcCccc--ccc
Q psy10669        107 PANFAVCEKALPT--------------------------------N-----N-------A---RFDFLSSGTTCY--SRC  137 (337)
Q Consensus       107 ~AN~~v~~aLl~~--------------------------------~-----~-------a---~pklII~~~S~~--~~~  137 (337)
                      +|+..++.+++++                                .     .       +   ++++|++..-.+  +..
T Consensus        96 ~al~~~~~~~~~~gd~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~  175 (387)
T PRK07777         96 EAIAAAVLGLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALRAAVTPRTRALIVNSPHNPTGTV  175 (387)
T ss_pred             HHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHHHHhcCcccEEEEEcCCCCCCCcc
Confidence            7888777888653                                0     0       0   257777752222  344


Q ss_pred             cC---hHHHHHHhhhcCCeEEEecccccccc------c-----------eeeeec-c----CC---chhhh--hHHHHHh
Q psy10669        138 LD---YARFRQICDETDSIMFADMSHISGLI------A-----------GVKGVT-K----TG---EKILY--DYEEKIN  187 (337)
Q Consensus       138 ~d---~~~l~eia~~~ga~l~vD~AH~~Gli------~-----------g~~~T~-~----~G---g~i~~--~l~~~i~  187 (337)
                      .+   +++|.++|+++|+++++|+++.--..      .           .+..|. |    .|   |+++.  ++.+.+.
T Consensus       176 ~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~l~~~~~  255 (387)
T PRK07777        176 LTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGWACGPAPLIAAVR  255 (387)
T ss_pred             CCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCceeEEEecCHHHHHHHH
Confidence            43   66677899999999999999753111      0           112232 2    13   55554  4555554


Q ss_pred             hccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCC-cchHH
Q psy10669        188 NAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNK-LTGSK  266 (337)
Q Consensus       188 ~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~-~~~~~  266 (337)
                      ....-... +++.+...+++.++..- +...++.++++.++.+++.+.|.+.|+++... ..+..+++.+...+ .++.+
T Consensus       256 ~~~~~~~~-~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~  332 (387)
T PRK07777        256 AAKQYLTY-VGGAPFQPAVAHALDHE-DAWVAALRDSLQAKRDRLAAGLAEAGFEVHDS-AGTYFLCADPRPLGYDDGTE  332 (387)
T ss_pred             HHHhhccc-CCCCHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHHHhCCCCccCC-CcceEEEecccccCCCCHHH
Confidence            32210111 11222233333333321 22335667888999999999999998887642 23566666765322 25677


Q ss_pred             HHHHH-hhcCceecc
Q psy10669        267 VELVL-EEIAIACNK  280 (337)
Q Consensus       267 ~~~~L-~~~gI~v~~  280 (337)
                      +.+.| +++||.+.+
T Consensus       333 ~~~~l~~~~gv~v~p  347 (387)
T PRK07777        333 FCRALPERVGVAAIP  347 (387)
T ss_pred             HHHHHHHhCCEEEeC
Confidence            77777 468999865

>PRK06434 cystathionine gamma-lyase; Validated

Probab=98.59  E-value=7.6e-07  Score=87.60  Aligned_cols=187  Identities=13%  Similarity=0.107  Sum_probs=121.1

Q ss_pred             ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669         70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------  119 (337)
Q Consensus        70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------  119 (337)
                      |+..++++|    ++++++.|.++     .+.+.||+.|...++.+++++                              
T Consensus        62 ~~P~~~~lE----~~la~leg~~~-----av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~  132 (384)
T PRK06434         62 GNPTVQAFE----EKYAVLENAEH-----ALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIHVD  132 (384)
T ss_pred             CChhHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHhcCcEEE
Confidence            778889999    47899999986     699999999988888888764                              


Q ss_pred             ----------ccc--cccEEEEcCccc--ccccChHHHHHHhhhcCCeEEEeccccccccc---------eeeeecc---
Q psy10669        120 ----------NNA--RFDFLSSGTTCY--SRCLDYARFRQICDETDSIMFADMSHISGLIA---------GVKGVTK---  173 (337)
Q Consensus       120 ----------~~a--~pklII~~~S~~--~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T~~---  173 (337)
                                ++.  ++|+|++.....  ....|+++|.++|+++|  ++||.+|.+++..         .+.|++|   
T Consensus       133 fvd~~~~~~~~l~~~~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD~t~~s~~~~~pl~~gaDivv~S~tK~i~  210 (384)
T PRK06434        133 YIDTDRLNSLDFDPSNYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVDATFASPYNQNPLDLGADVVIHSATKYIS  210 (384)
T ss_pred             EECCCChhheeecCCCeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEECCCCCcccCCchhcCCCEEEeecccccC
Confidence                      101  257888863332  47899999999999998  6789999888764         1234332   


Q ss_pred             --C---Cchhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CC-EE
Q psy10669        174 --T---GEKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GY-HV  243 (337)
Q Consensus       174 --~---Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~-~v  243 (337)
                        .   ||.|++   ++.+++.....  .+|....+.-|++.  +..+  .....+.++-.+|++.+++.|.+. .+ +|
T Consensus       211 G~~d~~gG~vv~~~~~~~~~~~~~~~--~~G~~~~~~~A~l~--~~gL--~tL~~R~~r~~~~a~~~a~~L~~~p~v~~V  284 (384)
T PRK06434        211 GHSDVVMGVAGTNNKSIFNNLVERRK--TLGSNPDPIQAYLA--LRGL--KTLGLRMEKHNKNGMELARFLRDSKKISNV  284 (384)
T ss_pred             CCCCceEEEEecCcHHHHHHHHHHHH--hcCCCCCHHHHHHH--HhCC--CcHHHHHHHHHHHHHHHHHHHHcCCCccEE
Confidence              1   677765   35554442211  12333334444432  3343  356788999999999999999984 23 23


Q ss_pred             ecCC---------CCCeEEEEEecCCCcchHHHHHHHhhcCce
Q psy10669        244 VTGG---------TDVHLILIDLRKNKLTGSKVELVLEEIAIA  277 (337)
Q Consensus       244 ~~~~---------t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~  277 (337)
                      ..++         .-.-++.+.+.  +  ...+.+.++...+.
T Consensus       285 ~yPgl~~~~~~~~g~g~~~sf~l~--~--~~~~~~f~~~l~l~  323 (384)
T PRK06434        285 YYPDTEIGKKVLRGFGGMLSFELR--S--MEDVHKFIRNLEIP  323 (384)
T ss_pred             ECCChHHHHHhcCCCCceEEEEEC--C--HHHHHHHHHhCCcc
Confidence            3221         12446666664  2  34455666655443

>PLN00175 aminotransferase family protein; Provisional

Probab=98.59  E-value=2.2e-05  Score=77.92  Aligned_cols=239  Identities=15%  Similarity=0.101  Sum_probs=134.6

Q ss_pred             cceeeeccCC--CCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-ch
Q psy10669         31 NGIELIASEN--FTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SP  107 (337)
Q Consensus        31 ~~i~l~asen--~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~  107 (337)
                      ..|+|-..+-  -.++.+++++...+... ..      .|....-..++.....+.+.+.+|.+-. .-.+|..++| ++
T Consensus        55 ~~i~l~~G~P~~~~~~~~~~~~~~~~~~~-~~------~Y~~~~G~~~Lr~aia~~~~~~~g~~~~-~~~~I~vt~G~~~  126 (413)
T PLN00175         55 GAINLGQGFPNFDGPDFVKEAAIQAIRDG-KN------QYARGFGVPELNSAIAERFKKDTGLVVD-PEKEVTVTSGCTE  126 (413)
T ss_pred             CeEecCCCCCCCCCCHHHHHHHHHHHhcC-CC------CcCCCCCCHHHHHHHHHHHHHHhCCCCC-CCCCEEEeCCHHH
Confidence            4565543332  23788888887654421 01      1221221233433223344555564311 0014778888 57


Q ss_pred             hHHHHHHhhCCc----------------------------------------ccc-----cccEEEEcCccc--ccccC-
Q psy10669        108 ANFAVCEKALPT----------------------------------------NNA-----RFDFLSSGTTCY--SRCLD-  139 (337)
Q Consensus       108 AN~~v~~aLl~~----------------------------------------~~a-----~pklII~~~S~~--~~~~d-  139 (337)
                      |+..++.+++++                                        ++.     ++|+|++..-++  +...+ 
T Consensus       127 al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~~~~~~k~i~i~~p~NPtG~~~s~  206 (413)
T PLN00175        127 AIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKTVTLRPPDFAVPEDELKAAFTSKTRAILINTPHNPTGKMFTR  206 (413)
T ss_pred             HHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEEECCcccCCCCHHHHHHhcCcCceEEEecCCCCCCCcCCCH
Confidence            887778888754                                        010     268787753333  35554 


Q ss_pred             --hHHHHHHhhhcCCeEEEeccccccccc----------e------eeeec-c----CC---chhhh--hHHHHHhhccC
Q psy10669        140 --YARFRQICDETDSIMFADMSHISGLIA----------G------VKGVT-K----TG---EKILY--DYEEKINNAVF  191 (337)
Q Consensus       140 --~~~l~eia~~~ga~l~vD~AH~~Gli~----------g------~~~T~-~----~G---g~i~~--~l~~~i~~~~~  191 (337)
                        +++|.++|+++|+++++|+++.-....          +      +.++. |    .|   |++++  ++.+.+.....
T Consensus       207 ~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~v~~~~l~~~l~~~~~  286 (413)
T PLN00175        207 EELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHS  286 (413)
T ss_pred             HHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCCcCcEEEEecchhhccCcchheeeeEeCHHHHHHHHHHHh
Confidence              445667889999999999998543321          1      12222 2    13   77665  46555543321


Q ss_pred             CCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCc-chHHHHHH
Q psy10669        192 PSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKL-TGSKVELV  270 (337)
Q Consensus       192 p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~-~~~~~~~~  270 (337)
                       .+..+++.+...+++.++..- +...++.+++..++.+.+.+.|.+.|+.+.. ...++.+++++...+. +..++...
T Consensus       287 -~~~~~~s~~~Q~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-p~g~~f~~~~~~~~~~~~~~~~~~~  363 (413)
T PLN00175        287 -FLTFATATPMQWAAVAALRAP-ESYYEELKRDYSAKKDILVEGLKEVGFKVYP-SSGTYFVMVDHTPFGFENDIAFCEY  363 (413)
T ss_pred             -hccCCCCHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHCCCeecC-CCeeEEEEEeccccCCCCHHHHHHH
Confidence             111233344444444544321 2234677888999999999999999988764 2346678888754343 35556555


Q ss_pred             H-hhcCceecc
Q psy10669        271 L-EEIAIACNK  280 (337)
Q Consensus       271 L-~~~gI~v~~  280 (337)
                      | ++.||.+.+
T Consensus       364 ll~~~gV~v~p  374 (413)
T PLN00175        364 LIEEVGVAAIP  374 (413)
T ss_pred             HHHhCCEEEeC
Confidence            5 578999876

>PRK07582 cystathionine gamma-lyase; Validated

Probab=98.59  E-value=3e-06  Score=82.81  Aligned_cols=190  Identities=15%  Similarity=0.036  Sum_probs=116.0

Q ss_pred             ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669         70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------  119 (337)
Q Consensus        70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------  119 (337)
                      ++....++|    +++++++ .+.     ++.+.||+.|+..++.+++++                              
T Consensus        49 ~~p~~~~Le----~~lA~l~-~~~-----~v~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~  118 (366)
T PRK07582         49 SNPTWRALE----AALGELE-GAE-----ALVFPSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAPLGVTVR  118 (366)
T ss_pred             CCccHHHHH----HHHHHHc-CCC-----EEEECCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCeEEEE
Confidence            445567787    4677888 333     688999999988888888764                              


Q ss_pred             -----c---c--ccccEEEEcCcccc--cccChHHHHHHhhhcCCeEEEeccccccc--cc------eeeee-cc-----
Q psy10669        120 -----N---N--ARFDFLSSGTTCYS--RCLDYARFRQICDETDSIMFADMSHISGL--IA------GVKGV-TK-----  173 (337)
Q Consensus       120 -----~---~--a~pklII~~~S~~~--~~~d~~~l~eia~~~ga~l~vD~AH~~Gl--i~------g~~~T-~~-----  173 (337)
                           .   .  .++++|++...+++  ...|+++|.++|+++|++++||++|..++  ..      .++++ +|     
T Consensus       119 ~v~~~~~~~~~~~~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~t~~~~~~~~p~~~g~Divv~S~sK~l~G~  198 (366)
T PRK07582        119 EAPTAGMAEAALAGADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDNTTATPLGQRPLELGADLVVASDTKALTGH  198 (366)
T ss_pred             EECCCChHHHhccCceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEECCCCCccccCchhcCCcEEEecccccccCC
Confidence                 0   0  12577776533333  46799999999999999999999986432  22      12232 22     


Q ss_pred             C---Cchhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCE-Eec
Q psy10669        174 T---GEKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYH-VVT  245 (337)
Q Consensus       174 ~---Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~-v~~  245 (337)
                      .   +|+++.   ++.+++... .....+++. +.-+.++.  ..+  .....+.++..+|++.+++.|.+. .+. |..
T Consensus       199 ~g~~~G~v~~~~~~l~~~l~~~-~~~~g~~~~-~~~a~l~~--r~l--~tl~~R~~~~~~na~~la~~L~~~p~v~~v~y  272 (366)
T PRK07582        199 SDLLLGYVAGRDPELMAAVERW-RLLAGAIPG-PFEAWLAH--RSL--GTLGLRFARQCANALAVAELLAGHPAVRGVRY  272 (366)
T ss_pred             CCeeEEEEEcCcHHHHHHHHHH-HHHhCCCCC-HHHHHHHH--hcc--ccHHHHHHHHHHHHHHHHHHHHhCCCccEEEC
Confidence            1   366654   355555432 111122222 22233222  222  235677789999999999999983 443 332


Q ss_pred             CCCC---------------CeEEEEEecCCCcchHHHHHHHhhcCceec
Q psy10669        246 GGTD---------------VHLILIDLRKNKLTGSKVELVLEEIAIACN  279 (337)
Q Consensus       246 ~~t~---------------~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~  279 (337)
                      .+-.               .-++.+.++    +...+.+.|+..++...
T Consensus       273 p~l~~~p~~~~~~~~~~~~gg~~s~~~~----~~~~~~~~~~~l~~~~~  317 (366)
T PRK07582        273 PGLPGDPAHEVAARQMRRFGGLVSFELA----DAAAAERFVAASRLVVA  317 (366)
T ss_pred             CCCCCCccHHHHHhhCCCCcceEEEEeC----CHHHHHHHHHhCCccee
Confidence            2222               224555553    35677888888777665

>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=98.58  E-value=8.8e-07  Score=88.53  Aligned_cols=88  Identities=16%  Similarity=0.123  Sum_probs=69.5

Q ss_pred             ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669         70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------  119 (337)
Q Consensus        70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------  119 (337)
                      ++..++++|    +++++++|.++     .+.+.||+.|+..++.+++++                              
T Consensus        62 ~~p~~~~le----~~lA~l~g~~~-----av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~  132 (433)
T PRK08134         62 SNPTVAVLE----ERVAALEGGVG-----AIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETT  132 (433)
T ss_pred             cChHHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEE
Confidence            556678888    58899999986     588999999987778888654                              


Q ss_pred             ----------ccc---cccEEEEcCcccc--cccChHHHHHHhhhcCCeEEEeccccccccc
Q psy10669        120 ----------NNA---RFDFLSSGTTCYS--RCLDYARFRQICDETDSIMFADMSHISGLIA  166 (337)
Q Consensus       120 ----------~~a---~pklII~~~S~~~--~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~  166 (337)
                                +.+   ++|+|++..-.++  ...|+++|.++|+++|++++||.+|.+|++.
T Consensus       133 ~vd~~d~~~l~~~i~~~TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD~t~a~~~~~  194 (433)
T PRK08134        133 FVKPGDIDGWRAAIRPNTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDSTFTTPYLL  194 (433)
T ss_pred             EECCCCHHHHHHhcCCCCeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEECCCcccccC
Confidence                      101   2688888643333  6799999999999999999999999988765

>TIGR03539 DapC_actino succinyldiaminopimelate transaminase

Probab=98.58  E-value=1.9e-05  Score=76.57  Aligned_cols=150  Identities=11%  Similarity=0.037  Sum_probs=88.6

Q ss_pred             ccEEEEc-Ccc-cccccChHH---HHHHhhhcCCeEEEeccccc--------cccc-----------eeeeec-c-----
Q psy10669        124 FDFLSSG-TTC-YSRCLDYAR---FRQICDETDSIMFADMSHIS--------GLIA-----------GVKGVT-K-----  173 (337)
Q Consensus       124 pklII~~-~S~-~~~~~d~~~---l~eia~~~ga~l~vD~AH~~--------Gli~-----------g~~~T~-~-----  173 (337)
                      +++|++. +++ .+...|.++   |.++|+++|+++++|+++..        +.+.           .++.+. |     
T Consensus       143 ~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~  222 (357)
T TIGR03539       143 PDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLA  222 (357)
T ss_pred             ccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCC
Confidence            6777765 333 246666554   66778999999999999841        1110           111222 1     


Q ss_pred             --CCchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCC
Q psy10669        174 --TGEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTD  249 (337)
Q Consensus       174 --~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~  249 (337)
                        ++|++++  ++.+.+......... +++.+...++..++..  ....+..+++..++.+.+.+.|.+.|+++... ..
T Consensus       223 G~R~G~~i~~~~~~~~~~~~~~~~~~-~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~~p-~~  298 (357)
T TIGR03539       223 GYRAGFVAGDPALVAELLTVRKHAGL-MVPAPVQAAMVAALGD--DGHVAEQKARYAARRAQLKPALEKAGFRIDHS-EA  298 (357)
T ss_pred             ceeEEEEecCHHHHHHHHHHHhhccc-CCCHHHHHHHHHHcCC--HHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCC-Cc
Confidence              3466665  565555433222222 3344444444444422  12334556777788888999999989876542 23


Q ss_pred             CeEEEEEecCCCcchHHHHHHHhhcCceecc
Q psy10669        250 VHLILIDLRKNKLTGSKVELVLEEIAIACNK  280 (337)
Q Consensus       250 ~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~  280 (337)
                      +..+++.+..   +..++.+.|.+.||.+.+
T Consensus       299 ~~~~~~~~~~---~~~~~~~~l~~~gV~v~p  326 (357)
T TIGR03539       299 GLYLWATRGE---DAWDTVDRLAELGILVAP  326 (357)
T ss_pred             cEEEEEECCC---CHHHHHHHHHhCCEEECC
Confidence            4455565532   456777888889999876

This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).

>PRK09276 LL-diaminopimelate aminotransferase; Provisional

Probab=98.57  E-value=4.4e-05  Score=74.59  Aligned_cols=154  Identities=12%  Similarity=0.067  Sum_probs=92.2

Q ss_pred             ccEEEEcCccc--ccccChH---HHHHHhhhcCCeEEEeccccccccc-----------------eeeeec-c----CC-
Q psy10669        124 FDFLSSGTTCY--SRCLDYA---RFRQICDETDSIMFADMSHISGLIA-----------------GVKGVT-K----TG-  175 (337)
Q Consensus       124 pklII~~~S~~--~~~~d~~---~l~eia~~~ga~l~vD~AH~~Gli~-----------------g~~~T~-~----~G-  175 (337)
                      +|+|++..-.+  +...|.+   +|.++|+++|+++++|+++.-....                 .+..|. |    .| 
T Consensus       167 ~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~Gl  246 (385)
T PRK09276        167 AKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGW  246 (385)
T ss_pred             ceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCcch
Confidence            67777762234  4677764   4556778999999999998632211                 012222 2    23 


Q ss_pred             --chhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCe
Q psy10669        176 --EKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVH  251 (337)
Q Consensus       176 --g~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h  251 (337)
                        |++++  ++.+.+..... ....+.+.+...+...++... ....++.++++.++.+++.+.|.+.|+++... ..+.
T Consensus       247 RiG~~i~~~~l~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~  323 (385)
T PRK09276        247 RIGFAVGNADLIAGLGKVKS-NVDSGVFQAIQEAGIAALNGP-QEVVEELRKIYQERRDILVEGLRKLGLEVEPP-KATF  323 (385)
T ss_pred             hheeeeCCHHHHHHHHHHHh-hccCCCCHHHHHHHHHHHcCc-HHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC-Ccce
Confidence              66665  46565554321 222233344444444444321 22335667788888999999999999877642 3355


Q ss_pred             EEEEEecCCCcchHHHHHHH-hhcCceeccC
Q psy10669        252 LILIDLRKNKLTGSKVELVL-EEIAIACNKN  281 (337)
Q Consensus       252 ~v~V~~~~~~~~~~~~~~~L-~~~gI~v~~~  281 (337)
                      .+++.+.. +++..++.+.| ++.||.+.+-
T Consensus       324 ~~~v~~~~-~~~~~~l~~~ll~~~gi~v~~g  353 (385)
T PRK09276        324 YVWAPVPK-GYTSAEFATLLLDKAGVVVTPG  353 (385)
T ss_pred             EEEEECCC-CCCHHHHHHHHHHhCCEEECCc
Confidence            57787754 34667766665 5689998873

>PRK07683 aminotransferase A; Validated

Probab=98.57  E-value=2.1e-05  Score=77.18  Aligned_cols=238  Identities=15%  Similarity=0.084  Sum_probs=127.9

Q ss_pred             ccceeeeccCCC--CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCC--CCCCCcceeecCCC
Q psy10669         30 INGIELIASENF--TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNL--DPEQWGCNVQPYSG  105 (337)
Q Consensus        30 ~~~i~l~asen~--~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~--~~~~~~~~v~~~Sg  105 (337)
                      .+.+.|-.++..  .++.+.+++...+.+.+ .+|      .-..-..+++....+.+.+-+|.  ++ ++  +|.+++|
T Consensus        28 ~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~-~~Y------~~~~g~~~lr~~ia~~l~~~~g~~~~~-~~--~I~~t~G   97 (387)
T PRK07683         28 DNLISLTIGQPDFPTPSHVKEAAKRAITENY-TSY------THNAGLLELRKAACNFVKDKYDLHYSP-ES--EIIVTIG   97 (387)
T ss_pred             CCeEEecCCCCCCCCCHHHHHHHHHHHhcCC-CCC------CCCCCCHHHHHHHHHHHHHHhCCCCCC-CC--cEEEeCC
Confidence            344665555432  36788888877654321 122      11112234442222233222343  22 11  5777777


Q ss_pred             -chhHHHHHHhhCCc----------------------------------------cc-----ccccEEEEcCccc--ccc
Q psy10669        106 -SPANFAVCEKALPT----------------------------------------NN-----ARFDFLSSGTTCY--SRC  137 (337)
Q Consensus       106 -t~AN~~v~~aLl~~----------------------------------------~~-----a~pklII~~~S~~--~~~  137 (337)
                       ++|+..++.+++++                                        .+     .++++|++..-++  +..
T Consensus        98 ~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~i~~p~NPtG~~  177 (387)
T PRK07683         98 ASEAIDIAFRTILEPGTEVILPAPIYPGYEPIIRLCGAKPVFIDTRSTGFRLTAEALENAITEKTRCVVLPYPSNPTGVT  177 (387)
T ss_pred             hHHHHHHHHHHhCCCCCEEEEcCCCccchHHHHHHcCCEEEEeecCcccCCCCHHHHHHhcCcCceEEEEeCCCCCCCcC
Confidence             68887777887643                                        00     0257776652233  344


Q ss_pred             cC---hHHHHHHhhhcCCeEEEeccccccccc----------------eeeeec-c----CC---chhhh--hHHHHHhh
Q psy10669        138 LD---YARFRQICDETDSIMFADMSHISGLIA----------------GVKGVT-K----TG---EKILY--DYEEKINN  188 (337)
Q Consensus       138 ~d---~~~l~eia~~~ga~l~vD~AH~~Gli~----------------g~~~T~-~----~G---g~i~~--~l~~~i~~  188 (337)
                      .+   +++|.++|+++|+++++|+++.-....                .+++|. |    .|   |+++.  ++.+.+..
T Consensus       178 ~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~~~~l~~~~~~  257 (387)
T PRK07683        178 LSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFAPSYLAKHILK  257 (387)
T ss_pred             CCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcCChhhccCCcCCeEEEeeccccccCccceeEEEEcCHHHHHHHHH
Confidence            44   566778889999999999998743222                112222 1    13   66665  45555543


Q ss_pred             ccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHH
Q psy10669        189 AVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVE  268 (337)
Q Consensus       189 ~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~  268 (337)
                      .. +....+++.....++...+.+- ....+..++++.++.+++.+.|.+.|+.+..+ ..+..+++.+...+.+..+..
T Consensus       258 ~~-~~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  334 (387)
T PRK07683        258 VH-QYNVTCASSISQYAALEALTAG-KDDAKMMRHQYKKRRDYVYNRLISMGLDVEKP-TGAFYLFPSIGHFTMSSFDFA  334 (387)
T ss_pred             HH-HhccCCCChHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHHcCCcccCC-CeeEEEEEecccCCCCHHHHH
Confidence            21 2222222223333332333221 12234567778889999999999888876542 234456666654344555554


Q ss_pred             -HHHhhcCceecc
Q psy10669        269 -LVLEEIAIACNK  280 (337)
Q Consensus       269 -~~L~~~gI~v~~  280 (337)
                       ..|+++||.+.+
T Consensus       335 ~~ll~~~gI~v~p  347 (387)
T PRK07683        335 LDLVEEAGLAVVP  347 (387)
T ss_pred             HHHHHhCCEEEcC
Confidence             456788999876

>PRK08117 4-aminobutyrate aminotransferase; Provisional

Probab=98.57  E-value=5.6e-06  Score=82.62  Aligned_cols=158  Identities=11%  Similarity=0.045  Sum_probs=87.8

Q ss_pred             EEEEcCcccccc---cC----hHHHHHHhhhcCCeEEEeccccccccc-e---------e---eeec-c--CCc-----h
Q psy10669        126 FLSSGTTCYSRC---LD----YARFRQICDETDSIMFADMSHISGLIA-G---------V---KGVT-K--TGE-----K  177 (337)
Q Consensus       126 lII~~~S~~~~~---~d----~~~l~eia~~~ga~l~vD~AH~~Gli~-g---------~---~~T~-~--~Gg-----~  177 (337)
                      .||+. ..+++.   .+    +++++++|++||++||+|+.|+ |+-- |         +   ..|. |  .||     +
T Consensus       210 avi~E-pi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-G~gr~G~~~~~~~~gv~pDi~t~sK~lg~G~pigav  287 (433)
T PRK08117        210 AVIIE-PVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQT-GFGRTGEWFAAQTFGVVPDIMTIAKGIASGLPLSAV  287 (433)
T ss_pred             EEEEC-CeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchh-ccCccccchhHhhcCCCCCEeehhhhccCCCcceeE
Confidence            45554 466554   34    5678899999999999999998 6411 1         1   1121 2  123     2


Q ss_pred             hhh-hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC--CEEecC-CCCCeEE
Q psy10669        178 ILY-DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG--YHVVTG-GTDVHLI  253 (337)
Q Consensus       178 i~~-~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G--~~v~~~-~t~~h~v  253 (337)
                      +.. ++.+.+......+++ +.++...++...++..+.+   ....+++.++.++|++.|.+..  +.+... ..-.-++
T Consensus       288 ~~~~~i~~~~~~~~~~~T~-~~np~~~aaa~a~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~Gl~~  363 (433)
T PRK08117        288 VASKELMEQWPLGSHGTTF-GGNPVACAAALATLEVIKE---EKLLDNANEMGAYALERLEVLKEKHPVIGDVRGIGLMI  363 (433)
T ss_pred             EEcHHHHhhccCCCCCCCC-CcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhcCCceeeeecCCcEE
Confidence            222 455544433333333 3467777777777766633   2567888888999998887742  322210 0111123


Q ss_pred             EEEecCC-----CcchHHHHHHHhhcCceeccC----cccchhhh
Q psy10669        254 LIDLRKN-----KLTGSKVELVLEEIAIACNKN----TGISLAAE  289 (337)
Q Consensus       254 ~V~~~~~-----~~~~~~~~~~L~~~gI~v~~~----~girig~~  289 (337)
                      .|.+...     ......+.+.|.+.||.+...    ..+||..+
T Consensus       364 gi~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~~~~lRl~p~  408 (433)
T PRK08117        364 GIEIVDPDGEPDGDAVEKILDKCLEKGLLFYLCGNAGNVLRMIPP  408 (433)
T ss_pred             EEEEecCCCCcchHHHHHHHHHHHHCCCEEeecCCCCCEEEEeCC
Confidence            3444321     112345566677789987542    15666543

>PRK08776 cystathionine gamma-synthase; Provisional

Probab=98.56  E-value=1.5e-06  Score=86.03  Aligned_cols=188  Identities=12%  Similarity=0.058  Sum_probs=115.3

Q ss_pred             chHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc--------------------------------
Q psy10669         72 QFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT--------------------------------  119 (337)
Q Consensus        72 ~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~--------------------------------  119 (337)
                      ...+++|    +++++++|.++     ++.+.||+.|...++.+++++                                
T Consensus        60 p~~~~Le----~~lA~l~g~~~-----~v~~~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v  130 (405)
T PRK08776         60 PTRDLLG----EALAELEGGAG-----GVITATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITA  130 (405)
T ss_pred             hHHHHHH----HHHHHHhCCCc-----eEEEcCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEE
Confidence            4446677    57889999875     688999998887778888654                                


Q ss_pred             ------cc--c---cccEEEEc-Ccc-cccccChHHHHHHhhhcCCeEEEeccccccccc-----e----eeeecc----
Q psy10669        120 ------NN--A---RFDFLSSG-TTC-YSRCLDYARFRQICDETDSIMFADMSHISGLIA-----G----VKGVTK----  173 (337)
Q Consensus       120 ------~~--a---~pklII~~-~S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----g----~~~T~~----  173 (337)
                            ++  +   ++|+|++. +++ .+...|+++|.++|+++|+++++|++|..|..-     |    +.|.+|    
T Consensus       131 ~~~d~~~l~~~i~~~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~a~~~~~~pl~~gaDivv~S~tK~l~g  210 (405)
T PRK08776        131 DLTDPRSLADALAQSPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLSPALQKPLEFGADLVLHSTTKYING  210 (405)
T ss_pred             CCCCHHHHHHhcCcCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCCcccccCCcccccCCEEEecCceeecC
Confidence                  01  1   26877765 433 357899999999999999999999999887632     1    122222    


Q ss_pred             ----CCchhhh---hHHHHHhhc-cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCE-E
Q psy10669        174 ----TGEKILY---DYEEKINNA-VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYH-V  243 (337)
Q Consensus       174 ----~Gg~i~~---~l~~~i~~~-~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~-v  243 (337)
                          .||.++.   ++.+++... ...+.  ++++.....+.   ..+  +..+.+.++..+|+..+++.|++. .+. |
T Consensus       211 ~~~~~~G~vv~~~~~l~~~l~~~~~~~g~--~~s~~~a~l~~---~gl--~tl~~r~~~~~~na~~la~~L~~~p~v~~V  283 (405)
T PRK08776        211 HSDVVGGAVVARDAELHQQLVWWANALGL--TGSPFDAFLTL---RGL--RTLDARLRVHQENADAIAALLDGHAAVNQV  283 (405)
T ss_pred             CCCceEEEEEeCCHHHHHHHHHHHHhcCC--CCCHHHHHHHH---hhh--CcHHHHHHHHHHHHHHHHHHHHcCCCeeEE
Confidence                1455543   355555432 11121  22222222222   222  245678899999999999999874 332 3


Q ss_pred             ecCCCCCe---------------EEEEEecCCCcchHHHHHHHhhcCcee
Q psy10669        244 VTGGTDVH---------------LILIDLRKNKLTGSKVELVLEEIAIAC  278 (337)
Q Consensus       244 ~~~~t~~h---------------~v~V~~~~~~~~~~~~~~~L~~~gI~v  278 (337)
                      ...+..+|               ++.+.+.  + +...+.+.++...+..
T Consensus       284 ~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~--~-~~~~~~~f~~~l~l~~  330 (405)
T PRK08776        284 YYPGLASHPGHALAARQQKGFGAMLSFELE--G-GEAAVRAFVDGLRYFT  330 (405)
T ss_pred             ECCCCCCCcCHHHHHhcCCCCceEEEEEEc--C-CHHHHHHHHHhCCcce
Confidence            22222322               5555554  3 3344556666655533

>PRK07309 aromatic amino acid aminotransferase; Validated

Probab=98.55  E-value=2.9e-05  Score=76.31  Aligned_cols=241  Identities=13%  Similarity=0.084  Sum_probs=131.2

Q ss_pred             cceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-ch
Q psy10669         31 NGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SP  107 (337)
Q Consensus        31 ~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~  107 (337)
                      .-|.|-..++-.  ++.+.+++...+...+       ..|....-..++.+...+.+.+-+|...... -+|.+++| ++
T Consensus        31 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~-------~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~~i~it~G~~~  102 (391)
T PRK07309         31 GILKLTLGEPDFTTPDHVKEAAKRAIDANQ-------SHYTGMAGLLELRQAAADFVKEKYNLDYAPE-NEILVTIGATE  102 (391)
T ss_pred             CeEEcCCCCCCCCCCHHHHHHHHHHHhcCC-------CCCCCCCCcHHHHHHHHHHHHHHhCCCCCCC-CcEEEeCChHH
Confidence            345565555444  6778888876543211       1122222234555333334444445421100 15777777 67


Q ss_pred             hHHHHHHhhCCc-------------------------------------------c-cc----cccEEEEc-Ccc-cccc
Q psy10669        108 ANFAVCEKALPT-------------------------------------------N-NA----RFDFLSSG-TTC-YSRC  137 (337)
Q Consensus       108 AN~~v~~aLl~~-------------------------------------------~-~a----~pklII~~-~S~-~~~~  137 (337)
                      |+..++.+++++                                           + +.    ++++|++. +++ .+..
T Consensus       103 al~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~NPtG~~  182 (391)
T PRK07309        103 ALSASLTAILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTTENDFVLTPEMLEKAILEQGDKLKAVILNYPANPTGVT  182 (391)
T ss_pred             HHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhhccCCCeEEEEEECCCCCCCcC
Confidence            877777887653                                           0 00    25777776 333 2455


Q ss_pred             cC---hHHHHHHhhhcCCeEEEecccccccc------c---------eeeeec-c----CC---chhhh--hHHHHHhhc
Q psy10669        138 LD---YARFRQICDETDSIMFADMSHISGLI------A---------GVKGVT-K----TG---EKILY--DYEEKINNA  189 (337)
Q Consensus       138 ~d---~~~l~eia~~~ga~l~vD~AH~~Gli------~---------g~~~T~-~----~G---g~i~~--~l~~~i~~~  189 (337)
                      .+   +++|.++|+++|+++++|+++.--..      .         .+..+. |    .|   |+++.  ++.+.+...
T Consensus       183 ~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRvG~~v~~~~~~~~~~~~  262 (391)
T PRK07309        183 YSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYLPDQTILINGLSKSHAMTGWRIGLIFAPAEFTAQLIKS  262 (391)
T ss_pred             cCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhccCCEEEEecChhhccCccceeEEEEeCHHHHHHHHHH
Confidence            55   66677888999999999999753111      0         112222 2    13   66654  566655543


Q ss_pred             cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCC-CcchHHHH
Q psy10669        190 VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKN-KLTGSKVE  268 (337)
Q Consensus       190 ~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~-~~~~~~~~  268 (337)
                       .+....+++.....++...+.+- .......+++..++.+++.+.|.+.|+.+... ..+-.+++.+... +.+..++.
T Consensus       263 -~~~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p-~gg~~~~~~l~~~~~~~~~~~~  339 (391)
T PRK07309        263 -HQYLVTAATTMAQFAAVEALTNG-KDDALPMKKEYIKRRDYIIEKMTDLGFKIIKP-DGAFYIFAKIPAGYNQDSFKFL  339 (391)
T ss_pred             -HhhcccCCChHHHHHHHHHHhCC-hhHHHHHHHHHHHHHHHHHHHHHHCCCeecCC-CeeEEEEEECCCCCCCCHHHHH
Confidence             23333344445555554444331 11224556777888888999999989887642 2233445565431 22445555


Q ss_pred             H-HHhhcCceeccCc
Q psy10669        269 L-VLEEIAIACNKNT  282 (337)
Q Consensus       269 ~-~L~~~gI~v~~~~  282 (337)
                      + .+++.||.+.+..
T Consensus       340 ~~l~~~~gv~v~pg~  354 (391)
T PRK07309        340 QDFARKKAVAFIPGA  354 (391)
T ss_pred             HHHHHhCCEEEeCch
Confidence            4 4667899997633

>PRK14808 histidinol-phosphate aminotransferase; Provisional

Probab=98.55  E-value=2.8e-05  Score=74.93  Aligned_cols=233  Identities=13%  Similarity=0.149  Sum_probs=143.2

Q ss_pred             ccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcC---CCCCCCcceeecCC
Q psy10669         30 INGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFN---LDPEQWGCNVQPYS  104 (337)
Q Consensus        30 ~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg---~~~~~~~~~v~~~S  104 (337)
                      ...|.|-..||..  ||.+++++...+....     -++|+..  ...++    ++.++++++   .++    -+|..++
T Consensus        19 ~~~i~l~~~~~~~~~p~~~~~~~~~~~~~~~-----~~~Y~~~--~~~~L----r~aia~~~~~~~~~~----~~i~it~   83 (335)
T PRK14808         19 RDRTYLALNENPFPFPEDLVDEVFRRLNSDT-----LRIYYDS--PDEEL----IEKILSYLDTDFLSK----NNVSVGN   83 (335)
T ss_pred             CceeEecCCCCCCCCCHHHHHHHHHHhhhhh-----hhcCCCC--ChHHH----HHHHHHHhCCCCCCc----ceEEEcC
Confidence            4668888888877  8889998876432210     0112211  12333    356677777   544    3688889


Q ss_pred             Cc-hhHHHHHHhhCCc-----------------------------c-----c-c-cccEEEEcCccc--ccccChHHHHH
Q psy10669        105 GS-PANFAVCEKALPT-----------------------------N-----N-A-RFDFLSSGTTCY--SRCLDYARFRQ  145 (337)
Q Consensus       105 gt-~AN~~v~~aLl~~-----------------------------~-----~-a-~pklII~~~S~~--~~~~d~~~l~e  145 (337)
                      |+ ++...++.++ ..                             +     . . ++++|++..-++  +...+.+++.+
T Consensus        84 Ga~~~i~~~~~~~-d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~i~i~nP~NPTG~~~s~~~l~~  162 (335)
T PRK14808         84 GADEIIYVMMLMF-DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRIPEVNVGEGDVVFIPNPNNPTGHVFEREEIER  162 (335)
T ss_pred             CHHHHHHHHHHHh-CcEEECCCCHHHHHHHHHHcCCeEEEecCCCcCCCChhHccCCCEEEEeCCCCCCCCCcCHHHHHH
Confidence            84 6766666666 21                             0     0 0 146666653344  58888889999


Q ss_pred             HhhhcCCeEEEeccccc--c--ccc--------eeeeec-c----CC---chhhh--hHHHHHhhccCCCCCCCCcHHHH
Q psy10669        146 ICDETDSIMFADMSHIS--G--LIA--------GVKGVT-K----TG---EKILY--DYEEKINNAVFPSLQGGPHNHAI  203 (337)
Q Consensus       146 ia~~~ga~l~vD~AH~~--G--li~--------g~~~T~-~----~G---g~i~~--~l~~~i~~~~~p~~~g~~~~~~i  203 (337)
                      |+ +++.++++|++..-  +  ...        .+..|. |    .|   |++++  ++.+.+.....+  .+ .+.+..
T Consensus       163 l~-~~~~~ii~DE~Y~~f~~~~~~~~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~~~~~~~l~~~~~~--~~-~~~~~q  238 (335)
T PRK14808        163 IL-KTGAFVALDEAYYEFHGESYVDLLKKYENLAVIRTFSKAFSLAAQRIGYVVSSEKFIDAYNRVRLP--FN-VSYVSQ  238 (335)
T ss_pred             HH-hcCCEEEEECchhhhcCCchHHHHHhCCCEEEEEechhhccCcccceEEEEeCHHHHHHHHHhcCC--CC-CCHHHH
Confidence            98 57999999999641  1  111        122332 2    23   77766  577777654333  22 333444


Q ss_pred             HHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCc-
Q psy10669        204 GAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT-  282 (337)
Q Consensus       204 aala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~-  282 (337)
                      .+...++...  ..+++..+++.++-+.+.+.|.+.|+++..  ++...+++.+...  +..++.+.|.+.||.|.... 
T Consensus       239 ~a~~~~l~~~--~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~--~~g~f~~~~l~~~--~~~~~~~~l~~~Gi~V~~~~~  312 (335)
T PRK14808        239 MFAKVALDHR--EIFEERTKFIVEERERMKSALREMGYRITD--SRGNFVFIFMEKE--EKERLLEHLRAKNIAVRSFRE  312 (335)
T ss_pred             HHHHHHHhCH--HHHHHHHHHHHHHHHHHHHHHHHCCCEECC--CCCeEEEEeCCCc--cHHHHHHHHHHCCeEEEECCC
Confidence            4444444321  234666778888888899999999988765  4556667777632  45678888888999998543 


Q ss_pred             ccchhh
Q psy10669        283 GISLAA  288 (337)
Q Consensus       283 girig~  288 (337)
                      ++||+.
T Consensus       313 ~~Risi  318 (335)
T PRK14808        313 GVRITI  318 (335)
T ss_pred             CeEEec
Confidence            788853

>PRK08960 hypothetical protein; Provisional

Probab=98.55  E-value=3.8e-05  Score=75.26  Aligned_cols=236  Identities=11%  Similarity=-0.000  Sum_probs=130.6

Q ss_pred             cccceeeeccCCC--CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhc----C--CCCCCCccee
Q psy10669         29 QINGIELIASENF--TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAF----N--LDPEQWGCNV  100 (337)
Q Consensus        29 q~~~i~l~asen~--~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lf----g--~~~~~~~~~v  100 (337)
                      ....+.|-..++-  +++.|.+++...+.+. ..++      ....-..++.    +.+++++    |  +++    -+|
T Consensus        31 ~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~-~~~Y------~~~~g~~~lr----~~ia~~~~~~~g~~~~~----~~i   95 (387)
T PRK08960         31 GHDVIHLEIGEPDFTTAEPIVAAGQAALAAG-HTRY------TAARGLPALR----EAIAGFYAQRYGVDVDP----ERI   95 (387)
T ss_pred             CCCeEEeCCCCCCCCCCHHHHHHHHHHHhcC-CCcc------CCCCCCHHHH----HHHHHHHHHHhCCCCCh----hhE
Confidence            3456777776665  4889999998765432 1111      1111223333    3344444    3  333    258


Q ss_pred             ecCCC-chhHHHHHHhhCCc-----------------------------------------cc----c-cccEEE-EcCc
Q psy10669        101 QPYSG-SPANFAVCEKALPT-----------------------------------------NN----A-RFDFLS-SGTT  132 (337)
Q Consensus       101 ~~~Sg-t~AN~~v~~aLl~~-----------------------------------------~~----a-~pklII-~~~S  132 (337)
                      .+++| +++...++.+++++                                         .+    . ++++++ +.+.
T Consensus        96 ~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~  175 (387)
T PRK08960         96 LVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVERHWNADTVGALVASPA  175 (387)
T ss_pred             EEccCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHHHHHHHhCccceEEEEECCC
Confidence            88888 57776667888654                                         00    0 144444 4444


Q ss_pred             c-cccccChHH---HHHHhhhcCCeEEEecccccccc---------c-----eeeeec-c-------CCchhhh--hHHH
Q psy10669        133 C-YSRCLDYAR---FRQICDETDSIMFADMSHISGLI---------A-----GVKGVT-K-------TGEKILY--DYEE  184 (337)
Q Consensus       133 ~-~~~~~d~~~---l~eia~~~ga~l~vD~AH~~Gli---------~-----g~~~T~-~-------~Gg~i~~--~l~~  184 (337)
                      + .+...|.++   |.++|+++|+++++|+++.- +.         .     .+.+|. |       +.|+++.  ++.+
T Consensus       176 NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~-~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~~~~~  254 (387)
T PRK08960        176 NPTGTLLSRDELAALSQALRARGGHLVVDEIYHG-LTYGVDAASVLEVDDDAFVLNSFSKYFGMTGWRLGWLVAPPAAVP  254 (387)
T ss_pred             CCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccc-cccCCCCCChhhccCCEEEEeecccccCCcccEEEEEEcCHHHHH
Confidence            4 246666665   55668899999999998632 11         1     122332 2       2356554  4555


Q ss_pred             HHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcch
Q psy10669        185 KINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTG  264 (337)
Q Consensus       185 ~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~  264 (337)
                      .+.....+...+ ++.+...+...++..-.....++.++++.++.+.+.+.|.+.|+.+......+-.+++++...+.+.
T Consensus       255 ~~~~~~~~~~~~-~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~f~~~~~~~~~~~~  333 (387)
T PRK08960        255 ELEKLAQNLYIS-ASTPAQHAALACFEPETLAILEARRAEFARRRDFLLPALRELGFGIAVEPQGAFYLYADISAFGGDA  333 (387)
T ss_pred             HHHHHHhhhccC-CCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCcCCCeeEEEEEeccccCCCH
Confidence            554432222222 2333333333344321112335567778888888999999888765322234556778876533456


Q ss_pred             HHHHHH-HhhcCceeccC
Q psy10669        265 SKVELV-LEEIAIACNKN  281 (337)
Q Consensus       265 ~~~~~~-L~~~gI~v~~~  281 (337)
                      .++.+. |+++||.+.+-
T Consensus       334 ~~~~~~ll~~~gi~v~pg  351 (387)
T PRK08960        334 FAFCRHFLETEHVAFTPG  351 (387)
T ss_pred             HHHHHHHHHhCCEEEcCc
Confidence            666655 56789999863

>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed

Probab=98.55  E-value=2e-05  Score=76.49  Aligned_cols=252  Identities=12%  Similarity=0.057  Sum_probs=134.6

Q ss_pred             hhhhhhcHHHHHHHH-HHHhhcccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHH
Q psy10669          9 GTLAQTDPELYSLIK-KEKHRQINGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRS   85 (337)
Q Consensus         9 ~~l~~~d~~~~~~~~-~e~~rq~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~   85 (337)
                      +.+..+.+..+.-++ .........++|-..+...  +|.+++++......   .+|+.   ..|.   .++.....+.+
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~---~~Y~~---~~G~---~~lr~~ia~~l   75 (364)
T PRK07865          5 ARLPDFPWDTLAPAKATAAAHPDGIVDLSVGTPVDPVPPVIQEALAAAADA---PGYPT---TAGT---PELREAIVGWL   75 (364)
T ss_pred             ccCCCccHHHHHHHHHHHHhcCCCEEEcCCCCCCCCCCHHHHHHHHHHHhh---CCCCC---ccCC---HHHHHHHHHHH
Confidence            345555665554444 3334434456665544333  57788887653211   11111   1222   22322222344


Q ss_pred             HhhcC---CCCCCCcceeecCCCch-hHHHHHHhh-CCc--------------------------------ccc--cccE
Q psy10669         86 LKAFN---LDPEQWGCNVQPYSGSP-ANFAVCEKA-LPT--------------------------------NNA--RFDF  126 (337)
Q Consensus        86 a~lfg---~~~~~~~~~v~~~Sgt~-AN~~v~~aL-l~~--------------------------------~~a--~pkl  126 (337)
                      .+.+|   .+.    .+|.+++|++ +...+..++ +++                                .+.  ++++
T Consensus        76 ~~~~~~~~~~~----~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~  151 (364)
T PRK07865         76 ARRRGVTGLDP----AAVLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYPTYEVGARLAGATVVRADSLTELGPQRPAL  151 (364)
T ss_pred             HHHcCCCCCCc----ccEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcccHHHHHHhcCCEEEecCChhhCCcccceE
Confidence            44445   333    2688999964 544444555 443                                111  2677


Q ss_pred             EEEcCccc--ccccChHH---HHHHhhhcCCeEEEeccccc--------ccc-----c------eeeeec-c-------C
Q psy10669        127 LSSGTTCY--SRCLDYAR---FRQICDETDSIMFADMSHIS--------GLI-----A------GVKGVT-K-------T  174 (337)
Q Consensus       127 II~~~S~~--~~~~d~~~---l~eia~~~ga~l~vD~AH~~--------Gli-----~------g~~~T~-~-------~  174 (337)
                      |++..-.+  +...+.++   |.++|+++|+++++|++|.-        +.+     +      .+++|. |       +
T Consensus       152 v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR  231 (364)
T PRK07865        152 IWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGYR  231 (364)
T ss_pred             EEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCCcee
Confidence            77752233  35556554   55678899999999999872        111     0      112222 2       2


Q ss_pred             Cchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeE
Q psy10669        175 GEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHL  252 (337)
Q Consensus       175 Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~  252 (337)
                      .|++++  ++.+.+......... +.+.+..+++..++..  ....++.++...++.+.+.+.|.+.|+.+..+ ..+-.
T Consensus       232 iG~i~~~~~~~~~~~~~~~~~~~-~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~  307 (364)
T PRK07865        232 AGFVAGDPALVAELLEVRKHAGM-MVPAPVQAAMVAALGD--DAHVREQRERYARRRAVLRPALEAAGFRVDHS-EAGLY  307 (364)
T ss_pred             eEEEecCHHHHHHHHHHHHhcCC-CcCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHcCCcccCC-CccEE
Confidence            477766  466655543221112 2233444444443322  12335667778888889999999999887642 22334


Q ss_pred             EEEEecCCCcchHHHHHHHhhcCceecc
Q psy10669        253 ILIDLRKNKLTGSKVELVLEEIAIACNK  280 (337)
Q Consensus       253 v~V~~~~~~~~~~~~~~~L~~~gI~v~~  280 (337)
                      +++.+.   .+..+..+.|.+.||.+.+
T Consensus       308 ~~~~~~---~~~~~~~~~l~~~gv~v~p  332 (364)
T PRK07865        308 LWATRG---EDCWDTVAWLAERGILVAP  332 (364)
T ss_pred             EEEeCC---CCHHHHHHHHHHCCEEEeC
Confidence            556552   2456677888888999876

>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=98.54  E-value=1.1e-06  Score=87.59  Aligned_cols=120  Identities=12%  Similarity=0.006  Sum_probs=81.1

Q ss_pred             eeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHH
Q psy10669         34 ELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVC  113 (337)
Q Consensus        34 ~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~  113 (337)
                      .+..|-.|.-+...+... .+..+. .++.-+|.  ++...+++|    +++++++|.++     .+.+.||+.|...++
T Consensus        24 pi~~~~~~~~~~~~~~~~-~~~~~~-~~~~y~r~--~~pt~~~Le----~~lA~l~g~~~-----~l~~ssG~~Ai~~al   90 (425)
T PRK06084         24 PIYQTTSYAFDDTQHGAD-LFDLKV-PGNIYTRI--MNPTNDVLE----QRVAALEGGVG-----ALAVASGMAAITYAI   90 (425)
T ss_pred             CEeCCCCcccCCHHHHHH-hhcccc-CCccccCC--CCchHHHHH----HHHHHHhCCCc-----eeEehhHHHHHHHHH
Confidence            456666666444322221 111121 13333443  445567787    58899999875     688899999988888


Q ss_pred             HhhCCc----------------------------------------ccc---cccEEEEc-Ccc-cccccChHHHHHHhh
Q psy10669        114 EKALPT----------------------------------------NNA---RFDFLSSG-TTC-YSRCLDYARFRQICD  148 (337)
Q Consensus       114 ~aLl~~----------------------------------------~~a---~pklII~~-~S~-~~~~~d~~~l~eia~  148 (337)
                      .+++++                                        +.+   ++|+|++. .++ .+...|+++|.++|+
T Consensus        91 ~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~~d~e~le~ai~~~tklV~lesp~NPtG~v~dl~~I~~la~  170 (425)
T PRK06084         91 QTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAAHDDIAALEALIDERTKAVFCESIGNPAGNIIDIQALADAAH  170 (425)
T ss_pred             HHHhCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEECCCCHHHHHHHhccCCcEEEEeCCCCCCCeecCHHHHHHHHH
Confidence            888654                                        111   26888875 323 468889999999999


Q ss_pred             hcCCeEEEeccccccccc
Q psy10669        149 ETDSIMFADMSHISGLIA  166 (337)
Q Consensus       149 ~~ga~l~vD~AH~~Gli~  166 (337)
                      ++|+++++|++|..|+..
T Consensus       171 ~~~i~vVvD~a~a~~~~~  188 (425)
T PRK06084        171 RHGVPLIVDNTVATPVLC  188 (425)
T ss_pred             HcCCEEEEECCCcccccC
Confidence            999999999999988654

>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase

Probab=98.54  E-value=9.4e-06  Score=77.89  Aligned_cols=190  Identities=15%  Similarity=0.152  Sum_probs=114.5

Q ss_pred             HHHHHhhcCCCCCCCcceeecCCCch-hHHHHHHhhCCc----------------------------------c-ccccc
Q psy10669         82 QQRSLKAFNLDPEQWGCNVQPYSGSP-ANFAVCEKALPT----------------------------------N-NARFD  125 (337)
Q Consensus        82 ~~~~a~lfg~~~~~~~~~v~~~Sgt~-AN~~v~~aLl~~----------------------------------~-~a~pk  125 (337)
                      |+.+++++|.+.    .++.+++|+. +...+..+ +.+                                  + ..+++
T Consensus        53 r~~la~~~~~~~----~~i~~t~G~~~~i~~~~~~-l~~g~vl~~~p~y~~~~~~~~~~g~~~~~~~d~~~l~~~~~~~~  127 (330)
T TIGR01140        53 RAAAAAYYGLPA----ASVLPVNGAQEAIYLLPRL-LAPGRVLVLAPTYSEYARAWRAAGHEVVELPDLDRLPAALEELD  127 (330)
T ss_pred             HHHHHHHhCCCh----hhEEECCCHHHHHHHHHHH-hCCCeEEEeCCCcHHHHHHHHHcCCEEEEeCCHHHHHhhcccCC
Confidence            467888999875    3788999965 45554444 332                                  0 11256


Q ss_pred             EEEE-cCcc-cccccChHH---HHHHhhhcCCeEEEeccccccccc-------------eeeeec-c----CC---chhh
Q psy10669        126 FLSS-GTTC-YSRCLDYAR---FRQICDETDSIMFADMSHISGLIA-------------GVKGVT-K----TG---EKIL  179 (337)
Q Consensus       126 lII~-~~S~-~~~~~d~~~---l~eia~~~ga~l~vD~AH~~Gli~-------------g~~~T~-~----~G---g~i~  179 (337)
                      +|++ .+++ .+...|.++   |.++|+++|+++++|++|......             .+++|+ |    .|   |+++
T Consensus       128 ~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~  207 (330)
T TIGR01140       128 VLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPDASLAPQAARFPGLVVLRSLTKFFGLAGLRLGFVV  207 (330)
T ss_pred             EEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCccchhhHhccCCCEEEEEecchhhcCchhhhhhee
Confidence            5544 4543 357888555   557778999999999998522111             122333 2    23   5555


Q ss_pred             h--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhh-HHHHHHHHHHHHHHHHHHHhCC-CEEecCCCCCeEEEE
Q psy10669        180 Y--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEF-KSYQAQVKANASHLSDEMIKRG-YHVVTGGTDVHLILI  255 (337)
Q Consensus       180 ~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~-~~y~~~v~~na~~l~~~L~~~G-~~v~~~~t~~h~v~V  255 (337)
                      .  ++.+.+... ++..  +.+.+..+++...+   ...++ +..++++.++.+.+.+.|++.| +++..  .....+++
T Consensus       208 ~~~~~~~~l~~~-~~~~--~~s~~~q~~~~~~l---~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~~~~f~~~  279 (330)
T TIGR01140       208 AHPALLARLREA-LGPW--TVNGPARAAGRAAL---ADTAWQAATRARLAAERARLAALLARLGGLEVVG--GTALFLLV  279 (330)
T ss_pred             CCHHHHHHHHhc-CCCC--CchHHHHHHHHHHH---hchHHHHHHHHHHHHHHHHHHHHHHhCCCceECC--CCCeEEEE
Confidence            4  566666654 2221  22333333333332   23334 5667888899999999999987 55543  34566777


Q ss_pred             EecCCCcchHHHHHHHhhcCceeccCc--------ccchhh
Q psy10669        256 DLRKNKLTGSKVELVLEEIAIACNKNT--------GISLAA  288 (337)
Q Consensus       256 ~~~~~~~~~~~~~~~L~~~gI~v~~~~--------girig~  288 (337)
                      ++..    ..++.+.|.+.||.+.+..        .|||+.
T Consensus       280 ~~~~----~~~l~~~l~~~gi~v~pg~~f~~~~~~~iRi~~  316 (330)
T TIGR01140       280 RTPD----AAALHEALARRGILIRDFDNFPGLDPRYLRFAL  316 (330)
T ss_pred             EcCC----HHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEe
Confidence            7652    4577788888899987643        477754

This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.

>PLN02263 serine decarboxylase

Probab=98.54  E-value=5.2e-06  Score=83.30  Aligned_cols=183  Identities=13%  Similarity=0.111  Sum_probs=119.3

Q ss_pred             CCCCCCcCcCccc--hHHHHHHHHHHHHHhhcCCCCC-CCcceeecCCCchhHHHHHHhh---CCc--------------
Q psy10669         60 EGLPGKRYYGGNQ--FIDEIEIVAQQRSLKAFNLDPE-QWGCNVQPYSGSPANFAVCEKA---LPT--------------  119 (337)
Q Consensus        60 ~g~~g~r~~~G~~--~~~~lE~~~~~~~a~lfg~~~~-~~~~~v~~~Sgt~AN~~v~~aL---l~~--------------  119 (337)
                      ..+.|-.+..++.  ...++|....+-++++||.+.. -||  +..++||.+|+..+.+-   .+.              
T Consensus       115 ~nN~Gdp~~~s~~~~~s~~~E~~Vi~wla~L~g~p~~~~~G--~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~  192 (470)
T PLN02263        115 INNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEKNEYWG--YITNCGTEGNLHGILVGREVFPDGILYASRESHYSVF  192 (470)
T ss_pred             ccCCCCccccCCcchhHHHHHHHHHHHHHHHhCCCCCCCeE--EEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHH
Confidence            3444544444443  3468898888899999999753 364  44456699997665543   110              


Q ss_pred             --------------------------c--cc----cccEEEEc--CcccccccChHHHHHHhhhcCC-----eEEEeccc
Q psy10669        120 --------------------------N--NA----RFDFLSSG--TTCYSRCLDYARFRQICDETDS-----IMFADMSH  160 (337)
Q Consensus       120 --------------------------~--~a----~pklII~~--~S~~~~~~d~~~l~eia~~~ga-----~l~vD~AH  160 (337)
                                                +  +.    +|-+||++  .+..+..-|+++|.+||+++|.     +|.||+|.
T Consensus       193 KAa~llgi~~~~Vp~d~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~  272 (470)
T PLN02263        193 KAARMYRMECVKVDTLVSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGAL  272 (470)
T ss_pred             HHHHhcCCcceEeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccc
Confidence                                      0  00    15455444  4556899999999999999997     99999998


Q ss_pred             cccccc---------e---e----eeecc-----CC-chhhh-h-HH-------HHHhhccCCCCCCCCcHHHHHHHHHH
Q psy10669        161 ISGLIA---------G---V----KGVTK-----TG-EKILY-D-YE-------EKINNAVFPSLQGGPHNHAIGAIATA  209 (337)
Q Consensus       161 ~~Gli~---------g---~----~~T~~-----~G-g~i~~-~-l~-------~~i~~~~~p~~~g~~~~~~iaala~a  209 (337)
                      +..++.         +   +    +..||     .+ |+++. + ..       +.+... -+.+.|+=+....+.+-..
T Consensus       273 GG~~lPf~~~~~~~df~~~vDSIsvD~HK~l~~P~~cgvll~R~~~~~~~~~~~~Yl~~~-d~ti~gSR~g~~al~lW~~  351 (470)
T PLN02263        273 FGLMMPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASR-DATIMGSRNGHAPIFLWYT  351 (470)
T ss_pred             hhhHhhhcccccccCCCcCccEEEECCccccCCCcCEEEEEEehhhHhhhccChHhhCCC-CCCcCCCCCcHHHHHHHHH
Confidence            665553         1   1    12232     12 44432 1 11       122221 2455566555555666666


Q ss_pred             HHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEec
Q psy10669        210 MLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVT  245 (337)
Q Consensus       210 ~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~  245 (337)
                      ++..-...|++..++.+++|++|.+.|++.|+.+..
T Consensus       352 L~~~G~~G~~~~i~~~~~~A~~l~~~l~~~g~~~~~  387 (470)
T PLN02263        352 LNRKGYRGFQKEVQKCLRNAHYLKDRLREAGISAML  387 (470)
T ss_pred             HHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEe
Confidence            777666788999999999999999999999999875

>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase

Probab=98.54  E-value=3.2e-06  Score=83.10  Aligned_cols=155  Identities=14%  Similarity=0.084  Sum_probs=102.3

Q ss_pred             ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669         70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------  119 (337)
Q Consensus        70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------  119 (337)
                      ++...+++|    +.+++++|.+.     .+.+.||+.|+..++.+++++                              
T Consensus        49 ~~p~~~~le----~~lA~l~g~~~-----v~~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~  119 (382)
T TIGR02080        49 GNPTRDLLQ----QALAELEGGAG-----AVVTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNALAKKGCFRVL  119 (382)
T ss_pred             CCchHHHHH----HHHHHHhCCCc-----EEEEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEE
Confidence            556667787    57789999654     466677789988888888764                              


Q ss_pred             ----------ccc---cccEEEEc-Ccc-cccccChHHHHHHhhhcCCeEEEeccccccccc--------eeeeec-c--
Q psy10669        120 ----------NNA---RFDFLSSG-TTC-YSRCLDYARFRQICDETDSIMFADMSHISGLIA--------GVKGVT-K--  173 (337)
Q Consensus       120 ----------~~a---~pklII~~-~S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~--------g~~~T~-~--  173 (337)
                                +.+   ++|+|++. +++ .+...|+++|.++|+++|+++++|++|..|+..        .++++. |  
T Consensus       120 ~~d~~d~~~l~~ai~~~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~pl~~gaDivv~S~sK~l  199 (382)
T TIGR02080       120 FVDQGDEQALRAALAQKPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVDNTFLSPALQNPLALGADLVLHSCTKYL  199 (382)
T ss_pred             EECCCCHHHHHHhcCcCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCCEEEeecceec
Confidence                      001   26887775 433 358899999999999999999999999888643        122222 2  


Q ss_pred             ------CCchhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC
Q psy10669        174 ------TGEKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR  239 (337)
Q Consensus       174 ------~Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~  239 (337)
                            .+|+++.   ++.+++.... . ..|....+.-+.++  +..+  .....++++..+|+..+++.|.+.
T Consensus       200 ~G~~~~~~G~i~~~~~~~~~~l~~~~-~-~~g~~~sp~~a~l~--lr~l--~tl~~R~~~~~~na~~~a~~L~~~  268 (382)
T TIGR02080       200 NGHSDVIAGAVIAKDPQVAEELAWWA-N-NLGVTGGAFDSYLT--LRGL--RTLVARMRLQQRNAQAIVEYLQTQ  268 (382)
T ss_pred             cCCCCceeEEEEeCCHHHHHHHHHHH-H-ccCCCCCHHHHHHH--Hccc--chHHHHHHHHHHHHHHHHHHHHhC
Confidence                  2565543   4555554321 1 12333334444433  3333  245677888899999999999984

This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.

>PRK09105 putative aminotransferase; Provisional

Probab=98.53  E-value=1.9e-05  Score=77.18  Aligned_cols=229  Identities=14%  Similarity=0.075  Sum_probs=138.6

Q ss_pred             cceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-ch
Q psy10669         31 NGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SP  107 (337)
Q Consensus        31 ~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~  107 (337)
                      ..+.|-..||..  +|.|.+++...+. ..      .+ |.-. ...+    .++.+++++|.+.    -+|.+++| ++
T Consensus        44 ~~i~l~~~~~~~~~~~~~~~a~~~~~~-~~------~~-Y~~~-~~~~----Lr~aia~~~~v~~----e~I~it~Gs~~  106 (370)
T PRK09105         44 GAVFLNANECPLGPSPAARDAAARSAA-LS------GR-YDLE-LEDD----LRTLFAAQEGLPA----DHVMAYAGSSE  106 (370)
T ss_pred             CcEEecCCCCCCCCCHHHHHHHHHHHH-Hh------cC-CCCc-hHHH----HHHHHHHHhCcCh----hhEEEcCChHH
Confidence            347777777754  8999999976532 21      11 2211 1223    3457788899876    36888888 56


Q ss_pred             hHHHHHHhhCCc---------------------------------------cc--c--cccEEEE-cCcc-cccccChHH
Q psy10669        108 ANFAVCEKALPT---------------------------------------NN--A--RFDFLSS-GTTC-YSRCLDYAR  142 (337)
Q Consensus       108 AN~~v~~aLl~~---------------------------------------~~--a--~pklII~-~~S~-~~~~~d~~~  142 (337)
                      +...++.+++++                                       ++  +  ++++|++ ++++ -+...+.++
T Consensus       107 ai~~~~~~l~~~gd~Vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~v~l~nP~NPTG~~~~~~~  186 (370)
T PRK09105        107 PLNYAVLAFTSPTAGLVTADPTYEAGWRAADAQGAPVAKVPLRADGAHDVKAMLAADPNAGLIYICNPNNPTGTVTPRAD  186 (370)
T ss_pred             HHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCeEEEecCCCCCCCCHHHHHhcCCCCCEEEEeCCCCCCCcCcCHHH
Confidence            777777777653                                       01  1  2466655 4533 258888898


Q ss_pred             HHHHhhh--cCCeEEEeccccc--cc---cc--------eeeeec-c----CC---chhhh--hHHHHHhhccCCCCCCC
Q psy10669        143 FRQICDE--TDSIMFADMSHIS--GL---IA--------GVKGVT-K----TG---EKILY--DYEEKINNAVFPSLQGG  197 (337)
Q Consensus       143 l~eia~~--~ga~l~vD~AH~~--Gl---i~--------g~~~T~-~----~G---g~i~~--~l~~~i~~~~~p~~~g~  197 (337)
                      +.++++.  +|+++++|+++.-  +.   ..        .+..|+ |    .|   |+++.  ++.+.+... .   ..+
T Consensus       187 l~~l~~~~~~~~~lIvDEaY~~f~~~~s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~~i~~l~~~-~---~~~  262 (370)
T PRK09105        187 IEWLLANKPAGSVLLVDEAYIHFSDAPSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAARPDLLAKLARF-G---HNP  262 (370)
T ss_pred             HHHHHHhCCCCcEEEEECchHHhccCcchHHHHhhCCCEEEEecccHhhcCCccceeeeecCHHHHHHHHhc-C---CCC
Confidence            8888753  4899999999831  10   00        122333 2    23   67665  566666654 1   123


Q ss_pred             CcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCce
Q psy10669        198 PHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIA  277 (337)
Q Consensus       198 ~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~  277 (337)
                      +..+...+...++.+  ....++.++++.++.+.+.+.|.+.|+++..  ++...++++++   .+..++.+.|.+.||.
T Consensus       263 ~~~~~~~aa~~~L~~--~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~--~~~~f~~~~~~---~~~~~l~~~L~~~gI~  335 (370)
T PRK09105        263 LPVPAAAAGLASLRD--PKLVPQRRAENAAVREDTIAWLKKKGYKCTP--SQANCFMVDVK---RPAKAVADAMAKQGVF  335 (370)
T ss_pred             cCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCcCC--CCCcEEEEeCC---CCHHHHHHHHHHCCcE
Confidence            444444444444432  1223566778888999999999999998765  33444456654   2567777888777999


Q ss_pred             eccCc-----ccchh
Q psy10669        278 CNKNT-----GISLA  287 (337)
Q Consensus       278 v~~~~-----girig  287 (337)
                      +....     .+||+
T Consensus       336 v~~~~~~~~~~~Ris  350 (370)
T PRK09105        336 IGRSWPIWPNWVRVT  350 (370)
T ss_pred             EecCCCCCCCeEEEE
Confidence            84211     56665

>PRK02627 acetylornithine aminotransferase; Provisional

Probab=98.53  E-value=9.3e-06  Score=79.46  Aligned_cols=157  Identities=13%  Similarity=0.077  Sum_probs=89.9

Q ss_pred             ccEEEEcCccc-----c-cccChHHHHHHhhhcCCeEEEeccccccc--cc--------ee---eeec-c-------CCc
Q psy10669        124 FDFLSSGTTCY-----S-RCLDYARFRQICDETDSIMFADMSHISGL--IA--------GV---KGVT-K-------TGE  176 (337)
Q Consensus       124 pklII~~~S~~-----~-~~~d~~~l~eia~~~ga~l~vD~AH~~Gl--i~--------g~---~~T~-~-------~Gg  176 (337)
                      +++|++.+...     + -...+++|+++|+++|++|++|++|. |+  -+        ++   ..|. |       -|+
T Consensus       183 ~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~-g~g~~g~~~~~~~~~~~pdi~t~sK~~~~G~rig~  261 (396)
T PRK02627        183 TAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQT-GMGRTGKLFAYQHYGIEPDIMTLAKGLGGGVPIGA  261 (396)
T ss_pred             eEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhc-CCCccCceeeehhcCCCCCEEEEcchhhCCcccEE
Confidence            46777764321     1 12246788899999999999999997 33  11        10   0111 2       122


Q ss_pred             hhhh-hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC--CEEec-CCCCCeE
Q psy10669        177 KILY-DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG--YHVVT-GGTDVHL  252 (337)
Q Consensus       177 ~i~~-~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G--~~v~~-~~t~~h~  252 (337)
                      ++.. ++.+.+........+ +.++...++...++..+..   .++.+++.++.+++.+.|.+..  +.... ......+
T Consensus       262 ~~~~~~~~~~~~~~~~~~t~-~~~~~~~~aa~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  337 (396)
T PRK02627        262 VLAKEKVADVFTPGDHGSTF-GGNPLACAAALAVIEIIEE---EGLLENAAEVGEYLRAKLRELLEKYPGIKEVRGLGLM  337 (396)
T ss_pred             EEEcHHHHhccCCCCCCCCC-CCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHHhCCCeeeeccCcEE
Confidence            2222 455555432222223 3455666666666655432   3567888888888888887642  21111 1123445


Q ss_pred             EEEEecCCCcchHHHHHHHhhcCceeccCc--ccchhh
Q psy10669        253 ILIDLRKNKLTGSKVELVLEEIAIACNKNT--GISLAA  288 (337)
Q Consensus       253 v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~--girig~  288 (337)
                      +++.+.   .+..++.+.|.+.||.+.+..  .+||..
T Consensus       338 ~~i~~~---~~~~~~~~~l~~~Gv~v~~~~~~~lRi~~  372 (396)
T PRK02627        338 IGIELD---RPAAEIVKKALEKGLLINVTGDNVLRLLP  372 (396)
T ss_pred             EEEEec---CcHHHHHHHHHHCCeEEeecCCCEEEEEC
Confidence            666662   245667777777799997643  477754

>PRK08045 cystathionine gamma-synthase; Provisional

Probab=98.53  E-value=3.2e-06  Score=83.23  Aligned_cols=190  Identities=13%  Similarity=0.111  Sum_probs=116.8

Q ss_pred             ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669         70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------  119 (337)
Q Consensus        70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------  119 (337)
                      ++...+.+|    +++++++|.+.     .+.+.||+.|+..++.+++++                              
T Consensus        50 ~~pt~~~L~----~~lA~l~g~~~-----~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~  120 (386)
T PRK08045         50 GNPTRDVVQ----RALAELEGGAG-----AVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVL  120 (386)
T ss_pred             CCccHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEE
Confidence            445567777    58889999753     577788899988888888754                              


Q ss_pred             ----------ccc---cccEEEEcCccc--ccccChHHHHHHhhhcCCeEEEeccccccccc-----e----eeeecc--
Q psy10669        120 ----------NNA---RFDFLSSGTTCY--SRCLDYARFRQICDETDSIMFADMSHISGLIA-----G----VKGVTK--  173 (337)
Q Consensus       120 ----------~~a---~pklII~~~S~~--~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----g----~~~T~~--  173 (337)
                                +.+   ++|+|++...++  +...|+++|.++|+++|++++||+++..|...     |    +.+++|  
T Consensus       121 ~vd~~d~e~l~~~l~~~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivDeay~~~~~~~pl~~gaDivv~S~tK~l  200 (386)
T PRK08045        121 FVDQGDEQALRAALAEKPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFLSPALQNPLALGADLVLHSCTKYL  200 (386)
T ss_pred             EeCCCCHHHHHHhcccCCeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccCCchhhCCCEEEeecceec
Confidence                      000   268787763333  47899999999999999999999999888654     1    223322  


Q ss_pred             ---C---Cchhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCE-
Q psy10669        174 ---T---GEKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYH-  242 (337)
Q Consensus       174 ---~---Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~-  242 (337)
                         .   ||.++.   ++.+++..... . .|....+.-+.+  ++.-+  .....++++..+|+..+++.|++. .++ 
T Consensus       201 ~G~~d~~~G~vi~~~~~~~~~l~~~~~-~-~g~~~~p~~~~l--~~rgl--~tl~~R~~~~~~na~~la~~L~~~p~v~~  274 (386)
T PRK08045        201 NGHSDVVAGVVIAKDPDVVTELAWWAN-N-IGVTGGAFDSYL--LLRGL--RTLVPRMELAQRNAQAIVKYLQTQPLVKK  274 (386)
T ss_pred             cCCCCceeEEEEeCcHHHHHHHHHHHH-h-cCCCCCHHHHHH--HHhhh--ccHHHHHHHHHHHHHHHHHHHHcCCCEeE
Confidence               1   455543   45554442211 1 122222222222  22222  235688999999999999999984 332 


Q ss_pred             EecCCCCCe---------------EEEEEecCCCcchHHHHHHHhhcCce
Q psy10669        243 VVTGGTDVH---------------LILIDLRKNKLTGSKVELVLEEIAIA  277 (337)
Q Consensus       243 v~~~~t~~h---------------~v~V~~~~~~~~~~~~~~~L~~~gI~  277 (337)
                      |...+..+|               ++.+.+.  + +...+.+.++...+.
T Consensus       275 V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~--~-~~~~~~~f~~~l~~~  321 (386)
T PRK08045        275 LYHPSLPENQGHEIAARQQKGFGAMLSFELD--G-DEQTLRRFLGGLSLF  321 (386)
T ss_pred             EECCCCCCCcCHHHHHHhCCCCCceEEEEec--C-cHHHHHHHHHhccce
Confidence            333333333               5555554  3 334455666654443

>PRK04635 histidinol-phosphate aminotransferase; Provisional

Probab=98.51  E-value=8.7e-06  Score=78.83  Aligned_cols=192  Identities=15%  Similarity=0.088  Sum_probs=116.5

Q ss_pred             HHHHhhcCCCCCCCcceeecCCCc-hhHHHHHHhhCCc------------------------------------------
Q psy10669         83 QRSLKAFNLDPEQWGCNVQPYSGS-PANFAVCEKALPT------------------------------------------  119 (337)
Q Consensus        83 ~~~a~lfg~~~~~~~~~v~~~Sgt-~AN~~v~~aLl~~------------------------------------------  119 (337)
                      +.+++++|++.    -+|.+++|+ ++...++.+++++                                          
T Consensus        67 ~aia~~~~~~~----~~I~it~Gs~~~i~~~~~~~~~~g~d~vlv~~P~y~~y~~~~~~~g~~v~~v~~~~~~~~~~~~l  142 (354)
T PRK04635         67 NAYSAYAGVAP----EQILTSRGADEAIELLIRAFCEPGQDSIACFGPTYGMYAISAETFNVGVKALPLTADYQLPLDYI  142 (354)
T ss_pred             HHHHHHhCcCH----HHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCCCCCCCHHHH
Confidence            57778899987    379999995 6766666777542                                          


Q ss_pred             c-cccccEEEEcCccc--ccccChHHHHHHhhhc-CCeEEEeccccccc--------cc-----eeeeeccC-----C--
Q psy10669        120 N-NARFDFLSSGTTCY--SRCLDYARFRQICDET-DSIMFADMSHISGL--------IA-----GVKGVTKT-----G--  175 (337)
Q Consensus       120 ~-~a~pklII~~~S~~--~~~~d~~~l~eia~~~-ga~l~vD~AH~~Gl--------i~-----g~~~T~~~-----G--  175 (337)
                      + ..++|+|++..-++  +...|.+++.+|++.. ++++++|+++.--.        +.     .+..|+.|     |  
T Consensus       143 ~~~~~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~~~~~~~s~~~~~~~~~~~iv~~S~SK~~~l~GlR  222 (354)
T PRK04635        143 EQLDGAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYIEFCPEYSVADLLASYPNLVVLRTLSKAFALAGAR  222 (354)
T ss_pred             HhccCCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchHhhccCcchHHHHhhCCCEEEEechHHHhhhhHHH
Confidence            0 01367777763233  5899999999998764 69999999973211        11     12334322     3  


Q ss_pred             -chhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC-CEEecCCCCCe
Q psy10669        176 -EKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG-YHVVTGGTDVH  251 (337)
Q Consensus       176 -g~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G-~~v~~~~t~~h  251 (337)
                       |+++.  ++.+.++....|.  + .+.+...+...++.+-.....++.++++.++.++|.+.|.+.| +.+..  ++..
T Consensus       223 lG~~i~~~~~~~~l~~~~~~~--~-~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~--~~g~  297 (354)
T PRK04635        223 CGFTLANEELIEILMRVIAPY--P-VPLPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAALSMYGGAKVLE--GNGN  297 (354)
T ss_pred             HhhhhCCHHHHHHHHhhcCCC--C-CCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCceECC--CCCc
Confidence             56554  5766666543332  2 2222222222222211001234556677888889999999875 77664  3344


Q ss_pred             EEEEEecCCCcchHHHHHHHhhcCceeccCc------ccchh
Q psy10669        252 LILIDLRKNKLTGSKVELVLEEIAIACNKNT------GISLA  287 (337)
Q Consensus       252 ~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~------girig  287 (337)
                      .+++.+.    +..++.+.|.+.||.++...      .+||+
T Consensus       298 f~~~~~~----~~~~~~~~l~~~gv~v~~~~~~~~~~~lRis  335 (354)
T PRK04635        298 YVLAKFD----DVDAVFKALWDAGIVARAYKDPRLANCIRFS  335 (354)
T ss_pred             EEEEECC----CHHHHHHHHHHCCEEEEECCCCCCCCeEEEE
Confidence            5666664    35677888888999986432      46765

>PRK05367 glycine dehydrogenase; Provisional

Probab=98.50  E-value=3.6e-06  Score=91.28  Aligned_cols=201  Identities=13%  Similarity=0.127  Sum_probs=120.9

Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhC----C-----c--------------------------
Q psy10669         75 DEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL----P-----T--------------------------  119 (337)
Q Consensus        75 ~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl----~-----~--------------------------  119 (337)
                      .+++...++.+++++|.+.    +.+++.+|+++|++.+.++-    .     +                          
T Consensus       541 l~~i~e~q~~l~eltG~d~----~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~~vv~  616 (954)
T PRK05367        541 RELIDQLEAWLAEITGYDA----VSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGMKVVV  616 (954)
T ss_pred             HHHHHHHHHHHHHHHCCCC----EEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCCEEEE
Confidence            3566666789999999986    67888888888866554442    0     0                          


Q ss_pred             ------------cc----c----cccEEEEc-Cccccc-ccChHHHHHHhhhcCCeEEEeccccccccc-------e---
Q psy10669        120 ------------NN----A----RFDFLSSG-TTCYSR-CLDYARFRQICDETDSIMFADMSHISGLIA-------G---  167 (337)
Q Consensus       120 ------------~~----a----~pklII~~-~S~~~~-~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-------g---  167 (337)
                                  .+    .    ++..|+++ ++.++. ..|+++|.++|+++|++++||.||..|+++       |   
T Consensus       617 v~~d~~G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~~pg~~GADi  696 (954)
T PRK05367        617 VACDENGNIDLDDLRAKAEEHADNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMNAQVGLARPGDIGADV  696 (954)
T ss_pred             ECCCCCCCcCHHHHHHHHhccCCCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChhhccCCCChhhcCCCE
Confidence                        01    0    13444444 555554 468999999999999999999999977666       1   


Q ss_pred             eeee-cc-----C-C-----chhhh--hHHHHHhhc-----cCCCCCCCCcHHHH--HHH---HHHHHHHh-chhhHHHH
Q psy10669        168 VKGV-TK-----T-G-----EKILY--DYEEKINNA-----VFPSLQGGPHNHAI--GAI---ATAMLQAQ-SDEFKSYQ  222 (337)
Q Consensus       168 ~~~T-~~-----~-G-----g~i~~--~l~~~i~~~-----~~p~~~g~~~~~~i--aal---a~a~~e~~-~~~~~~y~  222 (337)
                      +.+. ||     . |     |++..  .+...+...     .++.-.|+.....+  +..   +.....++ ....++..
T Consensus       697 ~~~s~HK~f~~P~G~GGPg~G~l~vr~~l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~~~a~~yi~~~G~~Glr~~a  776 (954)
T PRK05367        697 SHLNLHKTFCIPHGGGGPGVGPIGVKAHLAPFLPGHPVQIAGGETGIGAVSAAPFGSASILPISWMYIRMMGAEGLRQAT  776 (954)
T ss_pred             EEecCcccCCCCcCCCCCceEEEeecccccccCCCCccCcCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHCHHHHHHHH
Confidence            2222 32     1 2     24432  233322211     11111122221111  111   22222222 24456777


Q ss_pred             HHHHHHHHHHHHHHHhCCCEEec---CCCCCeEEEEEecC----CCcchHHHHHHHhhcCceecc
Q psy10669        223 AQVKANASHLSDEMIKRGYHVVT---GGTDVHLILIDLRK----NKLTGSKVELVLEEIAIACNK  280 (337)
Q Consensus       223 ~~v~~na~~l~~~L~~~G~~v~~---~~t~~h~v~V~~~~----~~~~~~~~~~~L~~~gI~v~~  280 (337)
                      ++.+.||++++++|.+ ++++..   ++..-|-.++++..    .+.+..++.++|.++||....
T Consensus       777 ~~~~~~A~Yl~~~L~~-~~~~~~~~~~~~~~~e~i~~~~~~~~~~g~~~~di~krL~d~G~~~~t  840 (954)
T PRK05367        777 EVAILNANYIAKRLKD-HYPVLYTGANGRVAHECILDLRPLKESTGITVDDIAKRLIDYGFHAPT  840 (954)
T ss_pred             HHHHHHHHHHHHHHHh-hcCccccCCCCCcccceEEEeecccccCCCCHHHHHHHHHHCCCeEee
Confidence            7788899999999987 466644   22446677788753    135668899999999998764

>PRK05939 hypothetical protein; Provisional

Probab=98.50  E-value=1.7e-06  Score=85.45  Aligned_cols=87  Identities=20%  Similarity=0.120  Sum_probs=70.3

Q ss_pred             ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669         70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------  119 (337)
Q Consensus        70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------  119 (337)
                      |+...+++|    ++++++.|.++     ++.++||+.|+.+++.+++++                              
T Consensus        45 g~p~~~~lE----~~la~leg~~~-----~v~~ssG~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~  115 (397)
T PRK05939         45 GTPTTAALE----AKITKMEGGVG-----TVCFATGMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTM  115 (397)
T ss_pred             CCHHHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHHHHcCCCCEEEECCCccccHHHHHHHHHhcCCEEEE
Confidence            778889999    58899999986     699999999998888888764                              


Q ss_pred             ---------ccc---cccEEEEcC-cc-cccccChHHHHHHhhhcCCeEEEecccccccc
Q psy10669        120 ---------NNA---RFDFLSSGT-TC-YSRCLDYARFRQICDETDSIMFADMSHISGLI  165 (337)
Q Consensus       120 ---------~~a---~pklII~~~-S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli  165 (337)
                               +.+   ++|+|++.. ++ .+...|+++|.++|+++|+++++|++|.+|+.
T Consensus       116 v~~~d~e~l~~~l~~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~t~a~~~~  175 (397)
T PRK05939        116 VDATDVQNVAAAIRPNTRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDNTMTSPWL  175 (397)
T ss_pred             ECCCCHHHHHHhCCCCCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEECCcccccc
Confidence                     111   268888763 33 34678999999999999999999999988754

>PRK09028 cystathionine beta-lyase; Provisional

Probab=98.49  E-value=1.9e-06  Score=85.07  Aligned_cols=154  Identities=15%  Similarity=0.052  Sum_probs=102.4

Q ss_pred             cchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc-------------------------------
Q psy10669         71 NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT-------------------------------  119 (337)
Q Consensus        71 ~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~-------------------------------  119 (337)
                      +.....+|    ++++++.|.+.     .+.++||+.|+..++.+++++                               
T Consensus        60 npt~~~Le----~~iA~le~~~~-----~~~~~sG~~Ai~~~l~all~~GD~Vvv~~~~Y~~t~~l~~~~l~~~Gi~v~~  130 (394)
T PRK09028         60 TPTHFAFQ----AAIVELEGGAG-----TALYPSGAAAISNALLSFLKAGDHLLMVDSCYEPTRDLCDKILKGFGIETTY  130 (394)
T ss_pred             CchHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHhhhhcceEEEE
Confidence            44456777    57788888764     577888999988888998765                               


Q ss_pred             ---------c-cc--cccEEEEc-Cccc-ccccChHHHHHHhhhcCCeEEEeccccccccc-----e----eeeecc---
Q psy10669        120 ---------N-NA--RFDFLSSG-TTCY-SRCLDYARFRQICDETDSIMFADMSHISGLIA-----G----VKGVTK---  173 (337)
Q Consensus       120 ---------~-~a--~pklII~~-~S~~-~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----g----~~~T~~---  173 (337)
                               + ..  ++|+|++. +++. ....|+++|.++|+++|++++||.+|.+|+.-     |    +.+.+|   
T Consensus       131 v~~~~~e~l~~~l~~~TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD~t~a~p~~~~Pl~~GaDivv~S~tK~l~  210 (394)
T PRK09028        131 YDPMIGEGIRELIRPNTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNTWASPINSRPFEMGVDISIQAATKYIV  210 (394)
T ss_pred             ECCCCHHHHHHhcCcCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCccccccCCccccCceEEEEeCCeEec
Confidence                     0 01  27888887 4333 35788999999999999999999999998644     2    233333   


Q ss_pred             -----CCchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC
Q psy10669        174 -----TGEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR  239 (337)
Q Consensus       174 -----~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~  239 (337)
                           .||.+..  ++.+++.....  ..|+...|.-|.+.  +.-+  ....-++++..+||..+++.|++.
T Consensus       211 Gh~d~~~G~~~~~~~~~~~l~~~~~--~~G~~~~p~~a~l~--~rgl--~TL~lR~~~~~~na~~la~~L~~~  277 (394)
T PRK09028        211 GHSDVMLGTATANEKHWDQLREHSY--LMGQCTSPDDVYLA--MRGL--RTLGVRLAQHEKNALKVANWLATR  277 (394)
T ss_pred             CCCCEEEEEEECCHHHHHHHHHHHH--hcCCCCCHHHHHHH--Hccc--CcHHHHHHHHHHHHHHHHHHHhcC
Confidence                 2554443  34444443211  23343334433332  2233  346788999999999999999984

>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=98.48  E-value=1.4e-05  Score=79.71  Aligned_cols=151  Identities=10%  Similarity=0.103  Sum_probs=88.4

Q ss_pred             cEEEEcCcccccc---cC----hHHHHHHhhhcCCeEEEeccccccccce---------e----eeec-------cCCch
Q psy10669        125 DFLSSGTTCYSRC---LD----YARFRQICDETDSIMFADMSHISGLIAG---------V----KGVT-------KTGEK  177 (337)
Q Consensus       125 klII~~~S~~~~~---~d----~~~l~eia~~~ga~l~vD~AH~~Gli~g---------~----~~T~-------~~Gg~  177 (337)
                      ..||+. +++++.   .+    +++|+++|+++|+++++|+.|. |+..|         +    ...+       +.|++
T Consensus       199 aaiivE-pv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-G~r~g~~~~~~~~~~~pDi~~~gK~l~~G~p~ga~  276 (426)
T PRK00062        199 AAVIVE-PVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMT-GFRVALGGAQGYYGVTPDLTTLGKIIGGGLPVGAF  276 (426)
T ss_pred             EEEEEe-CCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechh-ccccCCccHHHHhCCCcchHhhhhHhhCCCcceee
Confidence            356664 456553   34    5678899999999999999996 65221         1    1111       22333


Q ss_pred             hhh-hHHHHHhhc--cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh----CCCEEecCCCCC
Q psy10669        178 ILY-DYEEKINNA--VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK----RGYHVVTGGTDV  250 (337)
Q Consensus       178 i~~-~l~~~i~~~--~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~----~G~~v~~~~t~~  250 (337)
                      +.. ++.+.++..  .+-+.+-+.++...++...++..+.+ +  +..+++.++.++|++.|++    .++.+.. ....
T Consensus       277 ~~~~~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~-~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v-rg~G  352 (426)
T PRK00062        277 GGRREIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKE-P--GFYEELEALTKRLAEGLKEAAKKAGIPLTV-NRVG  352 (426)
T ss_pred             eEHHHHHHhhccCCCceecccCcCCHHHHHHHHHHHHHHhc-c--hHHHHHHHHHHHHHHHHHHHHHHcCCceEE-EEec
Confidence            222 566666421  12111224666666666666665533 2  6788999999999998875    3554311 1244


Q ss_pred             eEEEEEecCCCc------------chHHHHHHHhhcCceeccC
Q psy10669        251 HLILIDLRKNKL------------TGSKVELVLEEIAIACNKN  281 (337)
Q Consensus       251 h~v~V~~~~~~~------------~~~~~~~~L~~~gI~v~~~  281 (337)
                      .+..|.+.+...            ....+...|.+.||.+.+.
T Consensus       353 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~~Gv~v~~~  395 (426)
T PRK00062        353 SMFGLFFTDEPVTNYADAKKSDTERFARFFHAMLDEGVYLAPS  395 (426)
T ss_pred             ceEEEEEecCCCcchhhhccccHHHHHHHHHHHHHCCeEeecC
Confidence            455565543211            1245677777889999763

>PRK07681 aspartate aminotransferase; Provisional

Probab=98.48  E-value=9.6e-05  Score=72.75  Aligned_cols=239  Identities=12%  Similarity=0.021  Sum_probs=131.6

Q ss_pred             cccceeeeccCCC--CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCC--CCCCCcceeecCC
Q psy10669         29 QINGIELIASENF--TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNL--DPEQWGCNVQPYS  104 (337)
Q Consensus        29 q~~~i~l~asen~--~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~--~~~~~~~~v~~~S  104 (337)
                      ....+.|-..++.  .++.+++++...+.+.-..+++    ..|.....  |.++ +.+.+-+|.  +++   .+|.+++
T Consensus        31 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~y~----~~G~~~lr--~aia-~~~~~~~g~~~~~~---~~I~it~  100 (399)
T PRK07681         31 GHKMIDLSIGNPDMPPADFVREEMVHTANQKESYGYT----LSGIQEFH--EAVT-EYYNNTHNVILNAD---KEVLLLM  100 (399)
T ss_pred             CCCeEEeCCCCCCCCCCHHHHHHHHHHHhccccCCCC----CCCcHHHH--HHHH-HHHHHHhCCCCCCC---CeEEECC
Confidence            3455777666654  4788888887654321001121    12332221  1111 233333343  321   1588888


Q ss_pred             Cc-hhHHHHHHhhCCc-----------------------------------------cc-----ccccEEEEc-Ccc-cc
Q psy10669        105 GS-PANFAVCEKALPT-----------------------------------------NN-----ARFDFLSSG-TTC-YS  135 (337)
Q Consensus       105 gt-~AN~~v~~aLl~~-----------------------------------------~~-----a~pklII~~-~S~-~~  135 (337)
                      |+ ++...++.+++++                                         .+     .++|+|++. +.+ -+
T Consensus       101 G~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~P~NPTG  180 (399)
T PRK07681        101 GSQDGLVHLPMVYANPGDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEEIADKAKMMILNFPGNPVP  180 (399)
T ss_pred             CcHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhcCCEEEEEecCCCCCCcCCHHHHHHhccccceEEEEeCCCCCcC
Confidence            85 6766667777654                                         01     026888876 433 24


Q ss_pred             cccChH---HHHHHhhhcCCeEEEeccccccccc-----------------eeeeec-c-------CCchhhh--hHHHH
Q psy10669        136 RCLDYA---RFRQICDETDSIMFADMSHISGLIA-----------------GVKGVT-K-------TGEKILY--DYEEK  185 (337)
Q Consensus       136 ~~~d~~---~l~eia~~~ga~l~vD~AH~~Gli~-----------------g~~~T~-~-------~Gg~i~~--~l~~~  185 (337)
                      ...+.+   +|.++|+++|+++++|+++.--...                 .+.+|. |       +-|+++.  ++.+.
T Consensus       181 ~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i~~~~l~~~  260 (399)
T PRK07681        181 AMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMIGNEEIVRA  260 (399)
T ss_pred             cCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccccCCccceeEEEecCHHHHHH
Confidence            677744   4567789999999999998621111                 112232 2       1266665  46665


Q ss_pred             HhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchH
Q psy10669        186 INNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGS  265 (337)
Q Consensus       186 i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~  265 (337)
                      +..... ....+++.+...++..++..- ....++.++.+.++.+++.+.|.+.|+++... ..+..+++++.. +.+..
T Consensus       261 ~~~~~~-~~~~~~s~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p-~~g~f~~~~l~~-~~~~~  336 (399)
T PRK07681        261 LTQFKS-NTDYGVFLPIQKAACAALRNG-AAFCEKNRGIYQERRDTLVDGFRTFGWNVDKP-AGSMFVWAEIPK-GWTSL  336 (399)
T ss_pred             HHHHHh-hcccCCCHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHCCCcccCC-CeeeEEEEECCC-CCCHH
Confidence            554321 111123333334444444321 12335667777888899999999999876532 346667788764 44566


Q ss_pred             HHHHHHh-hcCceeccC
Q psy10669        266 KVELVLE-EIAIACNKN  281 (337)
Q Consensus       266 ~~~~~L~-~~gI~v~~~  281 (337)
                      ++...|. ++||.+.+-
T Consensus       337 ~~~~~l~~~~gv~v~pg  353 (399)
T PRK07681        337 SFAYALMDRANVVVTPG  353 (399)
T ss_pred             HHHHHHHHhCCEEEeCC
Confidence            6666655 489998763

>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases

Probab=98.48  E-value=5.2e-05  Score=74.81  Aligned_cols=249  Identities=14%  Similarity=0.087  Sum_probs=138.2

Q ss_pred             HHHHHHHHHhhcccceeeeccC-----C-CCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCC
Q psy10669         18 LYSLIKKEKHRQINGIELIASE-----N-FTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNL   91 (337)
Q Consensus        18 ~~~~~~~e~~rq~~~i~l~ase-----n-~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~   91 (337)
                      +.+.+.+....+.+.|.|-..+     + ..++.+.+++...+......+      |.......++    |+.++++++.
T Consensus        19 ~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~~------Y~~~~g~~~l----r~~ia~~l~~   88 (403)
T TIGR01265        19 IVDNLKVKPNPEKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNG------YAPSVGALAA----REAVAEYLSS   88 (403)
T ss_pred             HHHHHHHHHhcCCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCCC------CCCCCCCHHH----HHHHHHHHHh
Confidence            4444444444556677777664     2 347889998876554322111      2111112223    4566777764


Q ss_pred             C-----CCCCcceeecCCC-chhHHHHHHhhCCc-------------------------------------------ccc
Q psy10669         92 D-----PEQWGCNVQPYSG-SPANFAVCEKALPT-------------------------------------------NNA  122 (337)
Q Consensus        92 ~-----~~~~~~~v~~~Sg-t~AN~~v~~aLl~~-------------------------------------------~~a  122 (337)
                      .     .+   -+|.+++| ++|...++.+++++                                           +.+
T Consensus        89 ~~~~~~~~---~~ii~t~G~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~  165 (403)
T TIGR01265        89 DLPGKLTA---DDVVLTSGCSQAIEICIEALANPGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEAL  165 (403)
T ss_pred             hcCCCCCH---HHEEEecChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHHHH
Confidence            2     11   25777777 78877777888643                                           000


Q ss_pred             ---cccEEEEcCccc--ccccC---hHHHHHHhhhcCCeEEEeccccc----c-c-cc----------eeeeec-c----
Q psy10669        123 ---RFDFLSSGTTCY--SRCLD---YARFRQICDETDSIMFADMSHIS----G-L-IA----------GVKGVT-K----  173 (337)
Q Consensus       123 ---~pklII~~~S~~--~~~~d---~~~l~eia~~~ga~l~vD~AH~~----G-l-i~----------g~~~T~-~----  173 (337)
                         +++++++...++  +...|   +++|.++|+++|+++++|+++.-    | - ..          .++++. |    
T Consensus       166 ~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~  245 (403)
T TIGR01265       166 ADEKTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVV  245 (403)
T ss_pred             hCcCccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhccCCcEEEEeecccccCC
Confidence               156666653333  46665   56677889999999999999752    1 0 01          112222 2    


Q ss_pred             ---CCchhhh----h-----HHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-C
Q psy10669        174 ---TGEKILY----D-----YEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-G  240 (337)
Q Consensus       174 ---~Gg~i~~----~-----l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G  240 (337)
                         +=|+++.    +     +.+.+......  ..+++.....++..++.+-....+++.++++.++.+.+.+.|... |
T Consensus       246 pGlRiG~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~  323 (403)
T TIGR01265       246 PGWRLGWIIIHDPHGIFRDTVLQGLKNLLQR--ILGPATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKDIPG  323 (403)
T ss_pred             CcceEEEEEEeCchhhhHHHHHHHHHHHhhh--hcCCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence               1144432    1     22333322111  113444555555555543212344667788888989999999876 7


Q ss_pred             CEEecCCCCCeEEEEEecCCC----cchHHHHHH-HhhcCceeccCc
Q psy10669        241 YHVVTGGTDVHLILIDLRKNK----LTGSKVELV-LEEIAIACNKNT  282 (337)
Q Consensus       241 ~~v~~~~t~~h~v~V~~~~~~----~~~~~~~~~-L~~~gI~v~~~~  282 (337)
                      +++.. ...+.-+++.+....    .+..++.+. +++.||.+.+..
T Consensus       324 ~~~~~-p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~  369 (403)
T TIGR01265       324 LVCPK-PEGAMYLMVKLELELFPEIKDDVDFCEKLVREESVICLPGS  369 (403)
T ss_pred             ceecC-CCceeEEEEeccccccCCCCCHHHHHHHHHHhCCEEEeCcc
Confidence            76543 245566777775431    145566555 567899988643

This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.

>TIGR03537 DapC succinyldiaminopimelate transaminase

Probab=98.47  E-value=2.1e-05  Score=76.01  Aligned_cols=152  Identities=10%  Similarity=0.011  Sum_probs=93.2

Q ss_pred             ccEEEEcCccc--ccccC---hHHHHHHhhhcCCeEEEeccccccccc--------------eeeeec-c-------CCc
Q psy10669        124 FDFLSSGTTCY--SRCLD---YARFRQICDETDSIMFADMSHISGLIA--------------GVKGVT-K-------TGE  176 (337)
Q Consensus       124 pklII~~~S~~--~~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~--------------g~~~T~-~-------~Gg  176 (337)
                      +|+|++..-++  +...|   .++|.++|+++|+++++|+++.-....              .+..|. |       +.|
T Consensus       137 ~~~i~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~GlRiG  216 (350)
T TIGR03537       137 TKIVWINYPHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGEPPHSALEVGIENVLAFHSLSKRSGMTGYRSG  216 (350)
T ss_pred             cEEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCchhhcCcCCEEEEeecccccCCccccce
Confidence            68777763333  46677   566777899999999999998643221              112221 2       237


Q ss_pred             hhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEE
Q psy10669        177 KILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLIL  254 (337)
Q Consensus       177 ~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~  254 (337)
                      +++.  ++.+.+.....+...+++ ....+++..++.+  ....++.++++.++.+.+.+.|.+.|+++... ..+-.++
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~q~~~~~~l~~--~~~~~~~r~~l~~~~~~~~~~l~~~g~~~~~~-~g~~~~~  292 (350)
T TIGR03537       217 FVAGDEKLISFLRKLRANFGVASP-DFVQAAAKAAWSD--DNHVLERRKIFKRKRDLFIEFFNKVGLEYLYP-DATFYLW  292 (350)
T ss_pred             eeecCHHHHHHHHHHHHhhccCCC-HHHHHHHHHHhCC--cHHHHHHHHHHHHHHHHHHHHHHHCCCcccCC-CeEEEEE
Confidence            7665  466655543223222232 2222333233321  12235667888899999999999999876542 2355567


Q ss_pred             EEecCCCcchHHHHHHHhhcCceecc
Q psy10669        255 IDLRKNKLTGSKVELVLEEIAIACNK  280 (337)
Q Consensus       255 V~~~~~~~~~~~~~~~L~~~gI~v~~  280 (337)
                      +++.. +.+..++.+.|.+.||.+.+
T Consensus       293 ~~~~~-~~~~~~l~~~L~~~gv~v~~  317 (350)
T TIGR03537       293 VKVPS-GIDAKDYALRLLENGIVVAP  317 (350)
T ss_pred             EECCC-CCCHHHHHHHHHHCCEEEcC
Confidence            87764 34677888888888999985

Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.

>PLN02880 tyrosine decarboxylase

Probab=98.46  E-value=1.8e-05  Score=80.39  Aligned_cols=186  Identities=16%  Similarity=0.094  Sum_probs=108.7

Q ss_pred             hHHHHHHHHHHHHHhhcCCCCCCC----cceeecCCCchhHHHHHHhh----C--------Cc-----------------
Q psy10669         73 FIDEIEIVAQQRSLKAFNLDPEQW----GCNVQPYSGSPANFAVCEKA----L--------PT-----------------  119 (337)
Q Consensus        73 ~~~~lE~~~~~~~a~lfg~~~~~~----~~~v~~~Sgt~AN~~v~~aL----l--------~~-----------------  119 (337)
                      ...++|..+.+-++++||.+...|    |--+..++||.||+..+.+-    +        ++                 
T Consensus       119 ~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa  198 (490)
T PLN02880        119 AATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKAC  198 (490)
T ss_pred             ccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHHH
Confidence            356899988999999999876422    22344455699986654332    0        11                 


Q ss_pred             ------------------------------cc----c---cccEEEEc--CcccccccChHHHHHHhhhcCCeEEEeccc
Q psy10669        120 ------------------------------NN----A---RFDFLSSG--TTCYSRCLDYARFRQICDETDSIMFADMSH  160 (337)
Q Consensus       120 ------------------------------~~----a---~pklII~~--~S~~~~~~d~~~l~eia~~~ga~l~vD~AH  160 (337)
                                                    .+    +   .|-+||.+  .+..+..-|+++|.++|+++|++++||+||
T Consensus       199 ~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~iwlHVDaA~  278 (490)
T PLN02880        199 QIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSNGMWFHVDAAY  278 (490)
T ss_pred             HHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHcCCEEEEehhh
Confidence                                          00    0   16666665  334678899999999999999999999999


Q ss_pred             cccccc---------ee------eeeccC------C-chhhh-h---HHHHHhh---ccCCCC---CCCCcHH-------
Q psy10669        161 ISGLIA---------GV------KGVTKT------G-EKILY-D---YEEKINN---AVFPSL---QGGPHNH-------  201 (337)
Q Consensus       161 ~~Gli~---------g~------~~T~~~------G-g~i~~-~---l~~~i~~---~~~p~~---~g~~~~~-------  201 (337)
                      +.+++.         |+      +...||      | |+++. +   +...+..   .+++..   .++.+..       
T Consensus       279 gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~~~g~llvr~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~~i~~~  358 (490)
T PLN02880        279 AGSACICPEYRHYIDGVEEADSFNMNAHKWFLTNFDCSLLWVKDRNALIQSLSTNPEFLKNKASQANSVVDYKDWQIPLG  358 (490)
T ss_pred             HHHHHhCHHHHHHhcCchhcCEEEECchhhcCCCccEEEEEEeCHHHHHHHHccCHHHhcCccccccCCCChhccCcCCC
Confidence            998653         32      222232      3 44432 2   2111110   001000   0011110       


Q ss_pred             ---HHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-CCCEEecCCCCCeEEEEEecC
Q psy10669        202 ---AIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-RGYHVVTGGTDVHLILIDLRK  259 (337)
Q Consensus       202 ---~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~G~~v~~~~t~~h~v~V~~~~  259 (337)
                         .-..+-..++.+-...+.++.++.++++++|++.|.+ .+++++.. .+..++.+.+.+
T Consensus       359 rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~-~~~~iv~Fr~~~  419 (490)
T PLN02880        359 RRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTP-RIFSLVCFRLVP  419 (490)
T ss_pred             CcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecC-CceEEEEEEEeC
Confidence               0112222344444456677888888999999999977 58999863 344455554443

>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]

Probab=98.45  E-value=5.6e-05  Score=73.72  Aligned_cols=228  Identities=16%  Similarity=0.169  Sum_probs=146.3

Q ss_pred             ceeeeccCCCC--CHHHHHHHhhhh--hhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcC-CCCCCCcceeecCCCc
Q psy10669         32 GIELIASENFT--SLAVLECLGSCL--QNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFN-LDPEQWGCNVQPYSGS  106 (337)
Q Consensus        32 ~i~l~asen~~--~p~V~~a~~~~l--~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg-~~~~~~~~~v~~~Sgt  106 (337)
                      -+-|-+.||..  ||.+.+++...+  .++|.+.           ...++.    +.+++.+| .+.    .+|....|+
T Consensus        24 ~i~LssNenP~gp~~~~~~~~~~~~~~~~rYPd~-----------~~~~l~----~a~a~~~~~~~~----~~V~~gnGs   84 (356)
T COG0079          24 IIKLSSNENPYGPPPKVIEAIRAALDKLNRYPDP-----------DYRELR----AALAEYYGVVDP----ENVLVGNGS   84 (356)
T ss_pred             ceeecCCCCCCCCCHHHHHHHHHHHHhhccCCCC-----------cHHHHH----HHHHHHhCCCCc----ceEEEcCCh
Confidence            46688899999  477888776543  3555432           123343    46778888 554    368878886


Q ss_pred             -hhHHHHHHhhCCc-------------------------------c--c---------c-cccEEEEc-Ccc-cccccCh
Q psy10669        107 -PANFAVCEKALPT-------------------------------N--N---------A-RFDFLSSG-TTC-YSRCLDY  140 (337)
Q Consensus       107 -~AN~~v~~aLl~~-------------------------------~--~---------a-~pklII~~-~S~-~~~~~d~  140 (337)
                       .....++.+++.+                               .  .         . ++++|++. +.+ -+..++.
T Consensus        85 de~i~~l~~~~~~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~~~~d~~~~~~~~~~~~~lv~i~nPNNPTG~~~~~  164 (356)
T COG0079          85 DELIELLVRAFVEPGDTVLIPEPTFSMYEIAAQLAGAEVVKVPLKEFRLDLDAILAAIRDKTKLVFLCNPNNPTGTLLPR  164 (356)
T ss_pred             HHHHHHHHHHhhcCCCEEEEcCCChHHHHHHHHhcCCeEEEecccccccCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCH
Confidence             4566666666553                               0  0         0 25666665 433 3588888


Q ss_pred             HHHHHHhhhc--CCeEEEeccc--ccc-----ccc-----eeeeec-c-------CCchhhh--hHHHHHhhccCCCCCC
Q psy10669        141 ARFRQICDET--DSIMFADMSH--ISG-----LIA-----GVKGVT-K-------TGEKILY--DYEEKINNAVFPSLQG  196 (337)
Q Consensus       141 ~~l~eia~~~--ga~l~vD~AH--~~G-----li~-----g~~~T~-~-------~Gg~i~~--~l~~~i~~~~~p~~~g  196 (337)
                      ++|.++++..  +++|+||+|=  .++     ++.     .+.-|+ |       +=|+.+.  ++.+.+++..-|+   
T Consensus       165 ~~l~~l~~~~~~~~~vVvDEAY~eF~~~~~~~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~~~~i~~l~~vr~p~---  241 (356)
T COG0079         165 EELRALLEALPEGGLVVIDEAYIEFSPESSLELLKYPPNLIVLRTFSKAFGLAGLRVGYAIANPELIAALNKVRPPF---  241 (356)
T ss_pred             HHHHHHHHhCCCCcEEEEeCchhhcCCchhhhhccCCCCEEEEEecHHhhhcchhceeeccCCHHHHHHHHHhcCCC---
Confidence            8888877654  8899999982  122     111     122233 2       2266554  6888888876665   


Q ss_pred             CCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCE-EecCCCCCeEEEEEecCCCcchHHHHHHHhhcC
Q psy10669        197 GPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYH-VVTGGTDVHLILIDLRKNKLTGSKVELVLEEIA  275 (337)
Q Consensus       197 ~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~-v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~g  275 (337)
                      +.+.++.++..+++..-  ...++..+++.+..++|.+.|...|+. +..  ++..-+++++.. +- ...+.+.|.+.|
T Consensus       242 ~v~~~a~~aa~aal~~~--~~~~~~~~~~~~~r~rl~~~l~~~~~~~v~p--S~aNFvlv~~~~-~~-~~~l~~~L~~~g  315 (356)
T COG0079         242 NVSSPALAAAIAALRDA--DYLEESVERIREERERLYAALKALGLFGVFP--SQANFVLVRVPD-AE-AAALAEALLKKG  315 (356)
T ss_pred             CCCHHHHHHHHHHcccH--HHHHHHHHHHHHHHHHHHHHHHhCCCCeecC--CCCcEEEEECCC-cc-HHHHHHHHHHCC
Confidence            23345555444444332  345677888888889999999998854 655  667788888776 32 557788888889


Q ss_pred             ceeccCc-------ccchh
Q psy10669        276 IACNKNT-------GISLA  287 (337)
Q Consensus       276 I~v~~~~-------girig  287 (337)
                      |.++...       .+||+
T Consensus       316 iivR~~~~~~~~~~~lRit  334 (356)
T COG0079         316 ILVRDCSSVGLLPGYLRIT  334 (356)
T ss_pred             EEEEeCCCCCCCCCeEEEE
Confidence            9999764       57773

>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=98.45  E-value=3.8e-06  Score=83.84  Aligned_cols=87  Identities=17%  Similarity=0.116  Sum_probs=68.1

Q ss_pred             cchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc-------------------------------
Q psy10669         71 NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT-------------------------------  119 (337)
Q Consensus        71 ~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~-------------------------------  119 (337)
                      +.....+|    +++++++|.++     ++.+.||+.|+..++.+++++                               
T Consensus        62 ~p~~~~le----~~lA~l~g~~~-----al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~  132 (427)
T PRK05994         62 NPTNAVLE----ERVAALEGGTA-----ALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRW  132 (427)
T ss_pred             CccHHHHH----HHHHHHhCCCc-----EEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEE
Confidence            34556777    58889999986     688999999999999888764                               


Q ss_pred             ---------ccc---cccEEEEc-Ccc-cccccChHHHHHHhhhcCCeEEEeccccccccc
Q psy10669        120 ---------NNA---RFDFLSSG-TTC-YSRCLDYARFRQICDETDSIMFADMSHISGLIA  166 (337)
Q Consensus       120 ---------~~a---~pklII~~-~S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~  166 (337)
                               +.+   ++|+|++. .++ .+...|+++|.++|+++|+++++|++|..|+..
T Consensus       133 vd~~d~~~l~~ai~~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~a~a~~~~~  193 (427)
T PRK05994        133 ADADDPASFERAITPRTKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVDNTLASPYLI  193 (427)
T ss_pred             ECCCCHHHHHHhcCcCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCccccccC
Confidence                     111   26888875 222 357889999999999999999999999977643

>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=98.44  E-value=3.8e-06  Score=83.87  Aligned_cols=88  Identities=14%  Similarity=0.144  Sum_probs=69.0

Q ss_pred             ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669         70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------  119 (337)
Q Consensus        70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------  119 (337)
                      |+...+.+|    ++++++.|.++     ++.+.||+.|+..++.+++++                              
T Consensus        59 ~nPtv~~lE----~~la~leg~~~-----av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~  129 (432)
T PRK06702         59 GNPTLAAFE----QKLAELEGGVG-----AVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVT  129 (432)
T ss_pred             CCcHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEE
Confidence            677888999    58899999987     688999999999888888765                              


Q ss_pred             -----------ccc---cccEEEEcCcccc--cccChHHHHHHhhhcCCeEEEeccccccccc
Q psy10669        120 -----------NNA---RFDFLSSGTTCYS--RCLDYARFRQICDETDSIMFADMSHISGLIA  166 (337)
Q Consensus       120 -----------~~a---~pklII~~~S~~~--~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~  166 (337)
                                 +.+   ++|+|++..-.++  ...|+++|.++|+++|+++++|.+....++.
T Consensus       130 ~vd~~~d~~~l~~~I~~~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD~T~~tP~~~  192 (432)
T PRK06702        130 FFNPNLTADEIVALANDKTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNTLATPYLC  192 (432)
T ss_pred             EECCCCCHHHHHHhCCcCCeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEECCCCchhhC
Confidence                       111   2788888522222  3459999999999999999999988766554

>PRK08056 threonine-phosphate decarboxylase; Provisional

Probab=98.44  E-value=4e-05  Score=74.26  Aligned_cols=224  Identities=12%  Similarity=0.090  Sum_probs=129.1

Q ss_pred             cceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCc-h
Q psy10669         31 NGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGS-P  107 (337)
Q Consensus        31 ~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt-~  107 (337)
                      ..+.|-..||..  ||.|++++...+.. . ..+|.       ....    ..|+.++++++.+.    -+|.+++|+ +
T Consensus        21 ~~i~l~~~~~~~~~p~~~~~a~~~~~~~-~-~~y~~-------~~~~----~lr~~ia~~~~~~~----~~i~it~Ga~~   83 (356)
T PRK08056         21 QLLDFSANINPLGMPVSLKRAIIDNLDC-A-ERYPD-------VEYR----HLHQALARHHQVPA----SWILAGNGETE   83 (356)
T ss_pred             hEEEeccccCCCCCCHHHHHHHHHHHHh-c-ccCcC-------ccHH----HHHHHHHHHhCcCh----hhEEECCCHHH
Confidence            457788788875  88999998764332 1 11211       1122    23467788899876    368888884 5


Q ss_pred             hHHHHHHhhCCc-----------------------------------------c-c-ccccEEEEc-Ccc-cccccC---
Q psy10669        108 ANFAVCEKALPT-----------------------------------------N-N-ARFDFLSSG-TTC-YSRCLD---  139 (337)
Q Consensus       108 AN~~v~~aLl~~-----------------------------------------~-~-a~pklII~~-~S~-~~~~~d---  139 (337)
                      +...++.++.+.                                         + . .++|+|++. +.+ -+...+   
T Consensus        84 ~l~~~~~~l~~g~viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~k~v~l~~p~NPTG~~~~~~~  163 (356)
T PRK08056         84 SIFAVVSGLKPRRAMIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLTDAILEALTPDLDCLFLCTPNNPTGLLPERQL  163 (356)
T ss_pred             HHHHHHHHhCCCCEEEeCCCcHHHHHHHHHcCCeEEEEecccccCCCccHHHHHhccCCCCEEEEeCCcCCCCCCCCHHH
Confidence            655555665221                                         0 0 126777765 433 247777   


Q ss_pred             hHHHHHHhhhcCCeEEEecccc------ccccc--------eeeeec-c-------CCchhhh---hHHHHHhhccCCCC
Q psy10669        140 YARFRQICDETDSIMFADMSHI------SGLIA--------GVKGVT-K-------TGEKILY---DYEEKINNAVFPSL  194 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~------~Gli~--------g~~~T~-~-------~Gg~i~~---~l~~~i~~~~~p~~  194 (337)
                      +++|.++|+++|+++++|++..      .+.+.        .+..+. |       +-|+++.   ++.+.+.....+. 
T Consensus       164 ~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~~~~~~l~~~~~~~-  242 (356)
T PRK08056        164 LQAIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPHLWVLRSLTKFYAIPGLRLGYLVNSDDAAVARMRRQQMPW-  242 (356)
T ss_pred             HHHHHHHHHhcCCEEEEecchhccCCcchHHHHHhccCCCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhCCCC-
Confidence            5566788899999999999842      11111        122232 2       2355553   3545555432221 


Q ss_pred             CCCCcHHHHHHHHHHHHHHhchhh-HHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCCCcchHHHHHHHh
Q psy10669        195 QGGPHNHAIGAIATAMLQAQSDEF-KSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKNKLTGSKVELVLE  272 (337)
Q Consensus       195 ~g~~~~~~iaala~a~~e~~~~~~-~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~  272 (337)
                        +.+....++...++   ....+ ++.++++.++.+.+.+.|.+. |+.+..  +++.-+++.+..   +..++.+.|.
T Consensus       243 --~~~~~~~~~a~~~l---~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~--~~~~~~~~~~~~---~~~~~~~~l~  312 (356)
T PRK08056        243 --SINAFAALAGEVIL---QDRAYQQATWQWLAEEGARFYQALCALPLLTVWP--GRANYLFLRCER---PDIDLQRALL  312 (356)
T ss_pred             --chhHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcC--CCCcEEEEEcCC---ChHHHHHHHH
Confidence              22222222222222   12233 455677888888899999875 777654  445556777653   3456777887


Q ss_pred             hcCceeccCc
Q psy10669        273 EIAIACNKNT  282 (337)
Q Consensus       273 ~~gI~v~~~~  282 (337)
                      +.||.+..-.
T Consensus       313 ~~gI~v~~~~  322 (356)
T PRK08056        313 TQRILIRSCA  322 (356)
T ss_pred             HCCeEEEECC
Confidence            8899987533

>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated

Probab=98.44  E-value=2.6e-05  Score=77.41  Aligned_cols=210  Identities=13%  Similarity=0.183  Sum_probs=139.2

Q ss_pred             CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCC----
Q psy10669         43 SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALP----  118 (337)
Q Consensus        43 ~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~----  118 (337)
                      |+..++||..           |--.|+|.....+||    +.++++||.++     .+..++|..+|..++..+++    
T Consensus        56 S~~m~aAM~~-----------GDD~Y~gdpSv~~Le----e~vael~G~E~-----alpthqGRgaE~Il~~~~~~~~g~  115 (467)
T TIGR02617        56 TQSMQAAMMR-----------GDEAYSGSRSYYALA----ESVKNIFGYQY-----TIPTHQGRGAEQIYIPVLIKKREQ  115 (467)
T ss_pred             CHHHHHHHHc-----------CCcccccCchHHHHH----HHHHHHhCCce-----EEECCCCchHHHHHHHhhcccccc
Confidence            6666666642           444577777788999    47789999996     57778999999888755433    


Q ss_pred             -----------c-------------------------------------------cc--c-c---c---cEEEEcCcc--
Q psy10669        119 -----------T-------------------------------------------NN--A-R---F---DFLSSGTTC--  133 (337)
Q Consensus       119 -----------~-------------------------------------------~~--a-~---p---klII~~~S~--  133 (337)
                                 +                                           ++  + +   +   -.+.++-+.  
T Consensus       116 e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v~~tlt~N~  195 (467)
T TIGR02617       116 EKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITCNS  195 (467)
T ss_pred             cccccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceeeeeeEEEec
Confidence                       1                                           00  0 0   0   122222111  


Q ss_pred             -cccccChHH---HHHHhhhcCCeEEEecccccc--c---------cc---------------eeeeec------cCCch
Q psy10669        134 -YSRCLDYAR---FRQICDETDSIMFADMSHISG--L---------IA---------------GVKGVT------KTGEK  177 (337)
Q Consensus       134 -~~~~~d~~~---l~eia~~~ga~l~vD~AH~~G--l---------i~---------------g~~~T~------~~Gg~  177 (337)
                       =+.+.+.+.   ++++|+++|..++.|.|=.+=  .         .+               +++...      |.||+
T Consensus       196 ~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglgApvGg~  275 (467)
T TIGR02617       196 AGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAMVPMGGL  275 (467)
T ss_pred             CCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCCCcccce
Confidence             145556555   557899999999999976441  1         00               223333      34888


Q ss_pred             hhh--h-HH---HHHhhc-----cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecC
Q psy10669        178 ILY--D-YE---EKINNA-----VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTG  246 (337)
Q Consensus       178 i~~--~-l~---~~i~~~-----~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~  246 (337)
                      ++.  + +.   ++.+..     -||. +|+....-+.|+|+++.|...   .+|.++=+...++|.+.|.+.|+.++. 
T Consensus       276 Lag~d~~~~~l~~~~~~~~i~~EGf~t-YGGlagrd~ea~a~Gl~e~~~---~~yl~~ri~qv~yl~~~L~~~Gvpi~~-  350 (467)
T TIGR02617       276 LCFKDDSFFDVYTECRTLCVVQEGFPT-YGGLEGGAMERLAVGLYDGMN---LDWLAYRINQVQYLVNGLEEIGVVCQQ-  350 (467)
T ss_pred             EEecchhHHHHHHHHHhhcccccCCcC-cCchhHHHHHHHHhhhhhccc---HHHHHHHHHHHHHHHHHHHhCCCcEEe-
Confidence            875  2 22   333321     2332 788899999999999999865   467777788899999999999999986 


Q ss_pred             CCCCeEEEEEecC-------CCcchHHHHHHHhh-cCcee
Q psy10669        247 GTDVHLILIDLRK-------NKLTGSKVELVLEE-IAIAC  278 (337)
Q Consensus       247 ~t~~h~v~V~~~~-------~~~~~~~~~~~L~~-~gI~v  278 (337)
                       +-.|-+.||.+.       ..+.+..+...|.. .||..
T Consensus       351 -~Gghav~iDa~~~lphip~~~fpa~al~~~ly~~~GiR~  389 (467)
T TIGR02617       351 -AGGHAAFVDAGKLLPHIPADQFPAHALACELYKVAGIRA  389 (467)
T ss_pred             -cCccEEEEehhhhCCCCChhhCcHHHHHHHHHHHcCcce
Confidence             889999898543       35566666666663 67763

Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.

>PRK05942 aspartate aminotransferase; Provisional

Probab=98.44  E-value=0.00012  Score=72.03  Aligned_cols=153  Identities=11%  Similarity=0.142  Sum_probs=89.0

Q ss_pred             ccEEEEc-Ccc-cccccC---hHHHHHHhhhcCCeEEEeccccc---------cccc-------ee-eeec-c----CC-
Q psy10669        124 FDFLSSG-TTC-YSRCLD---YARFRQICDETDSIMFADMSHIS---------GLIA-------GV-KGVT-K----TG-  175 (337)
Q Consensus       124 pklII~~-~S~-~~~~~d---~~~l~eia~~~ga~l~vD~AH~~---------Gli~-------g~-~~T~-~----~G-  175 (337)
                      +|+|++. +++ -+...+   +++|.++|+++|+++++|+++.-         .+..       .+ .++. |    .| 
T Consensus       171 ~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~Gl  250 (394)
T PRK05942        171 AKILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGW  250 (394)
T ss_pred             ceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhh
Confidence            6888876 433 246777   44566788999999999999642         1111       11 2222 2    12 


Q ss_pred             --chhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCe
Q psy10669        176 --EKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVH  251 (337)
Q Consensus       176 --g~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h  251 (337)
                        |+++.  ++.+.+..... .+..+...+...++..++... +...++.++++.++.+++.+.|.+.|+.+... ..+-
T Consensus       251 RiG~i~~~~~l~~~l~~~~~-~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~-~~~~  327 (394)
T PRK05942        251 RVGFVVGNRHIIQGLRTLKT-NLDYGIFSALQKAAETALQLP-DSYLQQVQERYRTRRDFLIQGLGELGWNIPPT-KATM  327 (394)
T ss_pred             heeeeecCHHHHHHHHHHHh-hcccCCCHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHCCCeecCC-Ceee
Confidence              66655  56666654322 111123334444444444322 22335667778888888999999889887642 2232


Q ss_pred             EEEEEecCCCcchHHHH-HHHhhcCceecc
Q psy10669        252 LILIDLRKNKLTGSKVE-LVLEEIAIACNK  280 (337)
Q Consensus       252 ~v~V~~~~~~~~~~~~~-~~L~~~gI~v~~  280 (337)
                      .+++.+.. +.+..++. +.|++.||.+.+
T Consensus       328 f~~~~~~~-~~~~~~~~~~~l~~~gV~v~~  356 (394)
T PRK05942        328 YLWVPCPV-GMGSTDFALNVLQKTGVVVTP  356 (394)
T ss_pred             EEEEECCC-CCCHHHHHHHHHHHCCEEEeC
Confidence            45666653 33445444 466778999865

>PRK07324 transaminase; Validated

Probab=98.43  E-value=1.9e-05  Score=77.21  Aligned_cols=196  Identities=14%  Similarity=0.143  Sum_probs=111.8

Q ss_pred             HHHHhhcC-CCCCCCcceeecCCC-chhHHHHHHhhCCc-----------------------------------------
Q psy10669         83 QRSLKAFN-LDPEQWGCNVQPYSG-SPANFAVCEKALPT-----------------------------------------  119 (337)
Q Consensus        83 ~~~a~lfg-~~~~~~~~~v~~~Sg-t~AN~~v~~aLl~~-----------------------------------------  119 (337)
                      +.++++++ .++    .+|.+++| ++|+..++.+++++                                         
T Consensus        69 ~~ia~~~~~~~~----~~vi~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~  144 (373)
T PRK07324         69 EAVASLYQNVKP----ENILQTNGATGANFLVLYALVEPGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLD  144 (373)
T ss_pred             HHHHHHhcCCCh----hhEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHH
Confidence            56677775 444    25777777 68888888998754                                         


Q ss_pred             cc-----ccccEEEEcCccc--ccccC---hHHHHHHhhhcCCeEEEeccccccccc-------------e-eeeec-c-
Q psy10669        120 NN-----ARFDFLSSGTTCY--SRCLD---YARFRQICDETDSIMFADMSHISGLIA-------------G-VKGVT-K-  173 (337)
Q Consensus       120 ~~-----a~pklII~~~S~~--~~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~-------------g-~~~T~-~-  173 (337)
                      .+     .++|+|++..-++  +...|   +++|.++|+++|+++++|+++. ++.-             + ..+|. | 
T Consensus       145 ~l~~~~~~~~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~-~l~~~~~~~s~~~~~~~~I~~~s~SK~  223 (373)
T PRK07324        145 ELRRLVRPNTKLICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYR-PLDEDGSTPSIADLYEKGISTNSMSKT  223 (373)
T ss_pred             HHHHhCCCCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccc-ccccCCCCCChhhccCCEEEEecchhh
Confidence            00     0268888763333  46677   6667788999999999999863 2211             1 12222 2 


Q ss_pred             ---CC---chhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEe
Q psy10669        174 ---TG---EKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVV  244 (337)
Q Consensus       174 ---~G---g~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~  244 (337)
                         .|   |++++  ++.+.+.........+.+.+...++ ..++... +...+..++.+.++.+.+.+.|.+. ++...
T Consensus       224 ~~~~G~RiG~i~~~~~li~~~~~~~~~~~~~~~~~~q~~a-~~~l~~~-~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~  301 (373)
T PRK07324        224 YSLPGIRVGWIAANEEVIDILRKYRDYTMICAGVFDDMLA-SLALEHR-DAILERNRKIVRTNLAILDEWVAKEPRVSYV  301 (373)
T ss_pred             cCCccceeEEEecCHHHHHHHHHHhCcEEecCChHHHHHH-HHHHcCH-HHHHHHHHHHHHHHHHHHHHHHhcCCCceEE
Confidence               13   66655  4666665442211122222223322 2333221 1223455667777888888888775 66655


Q ss_pred             cCCCCCeEEEEEecCCCcchHHHHHH-HhhcCceeccCc------ccchh
Q psy10669        245 TGGTDVHLILIDLRKNKLTGSKVELV-LEEIAIACNKNT------GISLA  287 (337)
Q Consensus       245 ~~~t~~h~v~V~~~~~~~~~~~~~~~-L~~~gI~v~~~~------girig  287 (337)
                      .+ ...-..++.+.. +.+..++.+. |+++||.+.+-.      .|||+
T Consensus       302 ~p-~gg~~~~i~~~~-~~~~~~~~~~ll~~~gv~v~pg~~F~~~~~iRis  349 (373)
T PRK07324        302 KP-KAVSTSFVKLDV-DMPSEDFCLKLLKETGVLLVPGNRFDLEGHVRIG  349 (373)
T ss_pred             CC-CceEEEEEEeCC-CCCHHHHHHHHHHhcCEEEECccccCCCCeEEEE
Confidence            42 111223455543 2355666555 567899988743      56665

>PRK07269 cystathionine gamma-synthase; Reviewed

Probab=98.43  E-value=4.1e-06  Score=81.84  Aligned_cols=185  Identities=14%  Similarity=0.131  Sum_probs=117.5

Q ss_pred             ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc----------------------c-------
Q psy10669         70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT----------------------N-------  120 (337)
Q Consensus        70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~----------------------~-------  120 (337)
                      ++....++|    +++++++|.++     .+.++||+.|+..++. ++++                      .       
T Consensus        52 ~~p~~~~le----~~lA~leg~~~-----~v~~~sG~aAi~~~l~-~l~~GD~VI~~~~~yg~~~~~~~~~~~~~~~~~~  121 (364)
T PRK07269         52 KNPTRAKLE----ETLAAIESADY-----ALATSSGMSAIVLAFS-VFPVGSKVVAVRDLYGGSFRWFNQQEKEGRFHFT  121 (364)
T ss_pred             CCccHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHH-HhCCCCEEEEecCCcCchHHHHHHHHhcCcEEEE
Confidence            556678888    57889999886     6888899999887774 4443                      0       


Q ss_pred             ---------cc---cccEEEEc-Ccc-cccccChHHHHHHhhhcCCeEEEeccccccccc---------eeeeecc----
Q psy10669        121 ---------NA---RFDFLSSG-TTC-YSRCLDYARFRQICDETDSIMFADMSHISGLIA---------GVKGVTK----  173 (337)
Q Consensus       121 ---------~a---~pklII~~-~S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T~~----  173 (337)
                               .+   ++|+|++. +++ .+...|+++|.++|+++|+++++|.++..++..         .+.|.+|    
T Consensus       122 ~~~d~~~l~~~i~~~TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD~t~~~~~~~~pl~~gaDivv~S~tK~l~g  201 (364)
T PRK07269        122 YANTEEELIAAIEEDTDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVDNTFYSPIYQRPIELGADIVLHSATKYLSG  201 (364)
T ss_pred             ecCCHHHHHHhcCcCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCcEEEecCceeccC
Confidence                     01   26888765 544 357789999999999999999999999887654         1233332    


Q ss_pred             ----CCchhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CC-EEe
Q psy10669        174 ----TGEKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GY-HVV  244 (337)
Q Consensus       174 ----~Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~-~v~  244 (337)
                          .||.|++   ++.+++... + ...|....+.-|+++.  ..+  .....+.++-.+|++++++.|.+. ++ +|.
T Consensus       202 ~~d~~gG~v~~~~~~l~~~~~~~-~-~~~G~~~s~~~a~l~~--~~L--~tL~~r~~~~~~na~~~a~~L~~~p~v~~v~  275 (364)
T PRK07269        202 HNDVLAGVVVTNDLELYEKLFYN-L-NTTGAVLSPFDSYLLM--RGL--KTLSLRMERSTANAQEVVAFLKKSPAVKEVL  275 (364)
T ss_pred             CCcccceEEEeCcHHHHHHHHHH-H-HHhCCCCCHHHHHHHH--cCC--CcHHHHHHHHHHHHHHHHHHHHhCCCccEEe
Confidence                2677665   355555422 1 1233444444444433  233  246788899999999999999984 43 344


Q ss_pred             cCCCCCeEEEEEecCCCcchHHHHHHHhhcC
Q psy10669        245 TGGTDVHLILIDLRKNKLTGSKVELVLEEIA  275 (337)
Q Consensus       245 ~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~g  275 (337)
                      ..+ -.-++.+.+.  +  ...+.+.++...
T Consensus       276 ypg-~gg~~sf~~~--~--~~~~~~f~~~l~  301 (364)
T PRK07269        276 YTG-KGGMISFKVA--D--ETRIPHILNSLK  301 (364)
T ss_pred             CCC-cCcEEEEEEC--C--HHHHHHHHHhCC
Confidence            322 2334455543  2  344445555433

>PRK07908 hypothetical protein; Provisional

Probab=98.43  E-value=7.6e-05  Score=72.00  Aligned_cols=229  Identities=15%  Similarity=0.098  Sum_probs=136.7

Q ss_pred             HhhcccceeeeccCCC--CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecC
Q psy10669         26 KHRQINGIELIASENF--TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPY  103 (337)
Q Consensus        26 ~~rq~~~i~l~asen~--~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~  103 (337)
                      ..+..+.+.|-..+|-  .++.+++++...+.. + .+|+..      ....+    .|+.+++++|.+.    .+|.++
T Consensus        18 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~-~~Y~~~------~g~~~----lr~aia~~~~~~~----~~I~it   81 (349)
T PRK07908         18 QDAGPGLLDFAVNVRHDTPPEWLRERLAARLGD-L-AAYPST------EDERR----ARAAVAARHGRTP----DEVLLL   81 (349)
T ss_pred             ccCCCCeEEecCCCCCCCCCHHHHHHHHHHhhH-h-hcCCCc------cchHH----HHHHHHHHhCcCh----hhEEEC
Confidence            3444567777777773  388899998765432 1 122221      11222    3467788889876    368898


Q ss_pred             CCc-hhHHHHHHhhCCc-----------------------------c--------cc-cccEEEEc-Ccc-cccccChHH
Q psy10669        104 SGS-PANFAVCEKALPT-----------------------------N--------NA-RFDFLSSG-TTC-YSRCLDYAR  142 (337)
Q Consensus       104 Sgt-~AN~~v~~aLl~~-----------------------------~--------~a-~pklII~~-~S~-~~~~~d~~~  142 (337)
                      +|+ ++...++. +-+.                             .        +. ++++|++. +++ .+...+.++
T Consensus        82 ~Ga~~al~~~~~-l~~~~viv~~P~y~~~~~~~~~~G~~i~~v~~~~~~~~d~~~l~~~~~~i~l~np~NPTG~~~~~~~  160 (349)
T PRK07908         82 AGAAEGFALLAR-LRPRRAAVVHPSFTEPEAALRAAGIPVHRVVLDPPFRLDPAAVPDDADLVVIGNPTNPTSVLHPAEQ  160 (349)
T ss_pred             CCHHHHHHHHHh-cCCCeEEEeCCCChHHHHHHHHcCCEEEeeccCcccCcChhHhccCCCEEEEcCCCCCCCCCcCHHH
Confidence            985 66555544 3211                             0        01 25777664 443 358888899


Q ss_pred             HHHHhhhcCCeEEEeccccc---cc----cc------eeeeec-c-------CCchhhh--hHHHHHhhccCCCCCCCCc
Q psy10669        143 FRQICDETDSIMFADMSHIS---GL----IA------GVKGVT-K-------TGEKILY--DYEEKINNAVFPSLQGGPH  199 (337)
Q Consensus       143 l~eia~~~ga~l~vD~AH~~---Gl----i~------g~~~T~-~-------~Gg~i~~--~l~~~i~~~~~p~~~g~~~  199 (337)
                      |.++|++ +.++++|++|.-   |-    ..      .+..|. |       +-|+++.  ++.+.+.+...+.   +..
T Consensus       161 l~~l~~~-~~~iIvDe~y~~~~~~~~~~l~~~~~~~~i~i~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~~---~~~  236 (349)
T PRK07908        161 LLALRRP-GRILVVDEAFADAVPGEPESLAGDDLPGVLVLRSLTKTWSLAGLRVGYALGAPDVLARLTRGRAHW---PVG  236 (349)
T ss_pred             HHHHHhc-CCEEEEECcchhhccCCccccccccCCCEEEEeecccccCCccceeeeeecCHHHHHHHHhcCCCC---Ccc
Confidence            9999975 789999999841   21    10      112222 2       2366665  5666666543322   233


Q ss_pred             HHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceec
Q psy10669        200 NHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACN  279 (337)
Q Consensus       200 ~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~  279 (337)
                      ....+++...+..-.....++.++++.++.+++.+.|.+.|+++... +....+++.+.+    ..++.+.|.+.||.+.
T Consensus       237 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p-~~g~~~~~~~~~----~~~~~~~l~~~gI~v~  311 (349)
T PRK07908        237 TLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAVGARVVDP-AAAPFVLVRVPD----AELLRKRLRERGIAVR  311 (349)
T ss_pred             HHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhCCcEeccC-CCceEEEEECCc----HHHHHHHHHhCCEEEE
Confidence            34444433333211012345667788888888999998888887642 446666777653    4678888888999987


Q ss_pred             c
Q psy10669        280 K  280 (337)
Q Consensus       280 ~  280 (337)
                      +
T Consensus       312 ~  312 (349)
T PRK07908        312 R  312 (349)
T ss_pred             E
Confidence            5

>PRK07337 aminotransferase; Validated

Probab=98.43  E-value=6.5e-05  Score=73.55  Aligned_cols=242  Identities=11%  Similarity=0.052  Sum_probs=129.2

Q ss_pred             cccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-
Q psy10669         29 QINGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-  105 (337)
Q Consensus        29 q~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-  105 (337)
                      +...+.|-..++-.  +|.+.+++...+.+. ..+      |....-..++.....+.+.+.+|.+-..  -+|.+++| 
T Consensus        29 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~------Y~~~~g~~~lr~~ia~~~~~~~~~~~~~--~~i~~t~G~   99 (388)
T PRK07337         29 GRDIIHMGIGEPDFTAPEPVVEAAARALRRG-VTQ------YTSALGLAPLREAIAAWYARRFGLDVAP--ERIVVTAGA   99 (388)
T ss_pred             CCCEEEeCCcCCCCCCCHHHHHHHHHHHhcC-CCC------CCCCCCCHHHHHHHHHHHHHHhCCCCCh--HhEEEecCc
Confidence            34556666666543  778888887654321 111      2222223334322223333444542110  25777777 


Q ss_pred             chhHHHHHHhhCCc-----------------------------------------cc--c---cccEEEEc-Ccc-cccc
Q psy10669        106 SPANFAVCEKALPT-----------------------------------------NN--A---RFDFLSSG-TTC-YSRC  137 (337)
Q Consensus       106 t~AN~~v~~aLl~~-----------------------------------------~~--a---~pklII~~-~S~-~~~~  137 (337)
                      ++|...++.+++++                                         ++  .   ++++|++. +++ .+..
T Consensus       100 ~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~  179 (388)
T PRK07337        100 SAALLLACLALVERGDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEAAWGERTRGVLLASPSNPTGTS  179 (388)
T ss_pred             HHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHHHHhhcCccceEEEEECCCCCCCcC
Confidence            56766666777653                                         00  0   24555553 433 2354


Q ss_pred             cC---hHHHHHHhhhcCCeEEEeccccc-cc----cc--------eeeeec-c-------CCchhhh--hHHHHHhhccC
Q psy10669        138 LD---YARFRQICDETDSIMFADMSHIS-GL----IA--------GVKGVT-K-------TGEKILY--DYEEKINNAVF  191 (337)
Q Consensus       138 ~d---~~~l~eia~~~ga~l~vD~AH~~-Gl----i~--------g~~~T~-~-------~Gg~i~~--~l~~~i~~~~~  191 (337)
                      .+   +++|.++|+++|+++++|++... ..    ..        ....+. |       +-|+++.  ++.+.+.....
T Consensus       180 ~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~~~~~~l~~~l~~~~~  259 (388)
T PRK07337        180 IAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSALSLGDDVITINSFSKYFNMTGWRLGWLVVPEALVGTFEKLAQ  259 (388)
T ss_pred             cCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcChhhccCCEEEEEechhhcCCchhheeeeecCHHHHHHHHHHHH
Confidence            54   55667888999999999988541 10    00        112222 2       2366655  46565554433


Q ss_pred             CCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCC----CcchHHH
Q psy10669        192 PSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKN----KLTGSKV  267 (337)
Q Consensus       192 p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~----~~~~~~~  267 (337)
                      +...+.+.+ ...++..++..-....+++.++++.++.+++.+.|.+.|+.+.........++++++..    ..+..++
T Consensus       260 ~~~~~~s~~-~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~  338 (388)
T PRK07337        260 NLFICASAL-AQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALESLGFKVPVMPDGAFYVYADCRGVAHPAAGDSAAL  338 (388)
T ss_pred             HhccCCChH-HHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCeeEEEEEecccccCCCCCCHHHH
Confidence            322223333 33333333321101234566778888888899999998876532224566788888642    2355565


Q ss_pred             HH-HHhhcCceecc
Q psy10669        268 EL-VLEEIAIACNK  280 (337)
Q Consensus       268 ~~-~L~~~gI~v~~  280 (337)
                      .. .+++.||.+.+
T Consensus       339 ~~~ll~~~gv~v~p  352 (388)
T PRK07337        339 TQAMLHDAGVVLVP  352 (388)
T ss_pred             HHHHHHhCCEEEeC
Confidence            54 46778999875

>PLN02760 4-aminobutyrate:pyruvate transaminase

Probab=98.42  E-value=5.1e-06  Score=84.60  Aligned_cols=191  Identities=10%  Similarity=0.139  Sum_probs=106.6

Q ss_pred             EEEEcCccccc---ccC----hHHHHHHhhhcCCeEEEeccc-cccccc--------ee----eeec--------cCCch
Q psy10669        126 FLSSGTTCYSR---CLD----YARFRQICDETDSIMFADMSH-ISGLIA--------GV----KGVT--------KTGEK  177 (337)
Q Consensus       126 lII~~~S~~~~---~~d----~~~l~eia~~~ga~l~vD~AH-~~Gli~--------g~----~~T~--------~~Gg~  177 (337)
                      .||+. .++++   ..+    +++|++||+++|++||+|+.| +.|-.+        |+    ...+        |-|++
T Consensus       263 AvI~E-Pv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgK~lggG~~PigAv  341 (504)
T PLN02760        263 AFIAE-PVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFGCDKYNIKPDLVSLAKALSSAYMPIGAV  341 (504)
T ss_pred             EEEEC-CccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhhHHHhcCCCCcEEEecccccCCccccceE
Confidence            56665 46654   444    677999999999999999999 577666        11    1111        33443


Q ss_pred             hhh-hHHHHHhhc-------cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecC-C
Q psy10669        178 ILY-DYEEKINNA-------VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTG-G  247 (337)
Q Consensus       178 i~~-~l~~~i~~~-------~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~-~  247 (337)
                      +.. ++.+.+.+.       ..++++++ |+...|+...++..+.+   ++..+++.++.++|.+.|++. .+.++.. -
T Consensus       342 ~~~~~i~d~~~~~~~~~~~~~h~~T~~g-nPl~~Aaala~Le~i~~---~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vr  417 (504)
T PLN02760        342 LVSPEISDVIHSQSNKLGSFAHGFTYSG-HPVSCAVALEALKIYKE---RNIPEHVNKIAPRFQDGIKAFSGSPIIGEIR  417 (504)
T ss_pred             eecHHHHhhhhcccccccCcccCCCCCC-CHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHhcCCCeeeEE
Confidence            333 565655421       23445554 66666666666666643   267899999999999988773 1222210 0


Q ss_pred             CCCeEEEEEecCCCc----------chHHHHHHHhhcCceeccCc-ccchhhhhHhhhCCCHHHHHHHHhhCCCcHHHHH
Q psy10669        248 TDVHLILIDLRKNKL----------TGSKVELVLEEIAIACNKNT-GISLAAEIQAISGPKLVDFQTCLHKNEDIVKKVA  316 (337)
Q Consensus       248 t~~h~v~V~~~~~~~----------~~~~~~~~L~~~gI~v~~~~-girig~~~~t~~G~~~~~~~~~~~~~~~~~~~~~  316 (337)
                      ...-++-|.+.+..-          -...+.+.|.+.||.+.... .+||..+..    .+.+|+.+.+..   -++.+.
T Consensus       418 G~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g~~lrl~Ppl~----it~eeid~~~~~---l~~al~  490 (504)
T PLN02760        418 GTGLILGTEFVDNKSPNDPFPAEWGVGAYFGAECKKRGMLVRVAGDNIMMSPPLI----ITPEEVDELISI---YGKALK  490 (504)
T ss_pred             eCceEEEEEEecCCcccccccchhHHHHHHHHHHHhCCcEEEecCCEEEEECCCC----CCHHHHHHHHHH---HHHHHH
Confidence            111233444432210          03345566777899987543 567654432    223333322110   012356


Q ss_pred             HHHHHHHHHHhc
Q psy10669        317 ALKKEIEDYSNQ  328 (337)
Q Consensus       317 ~lr~~V~~~~~~  328 (337)
                      ++.++|.++-++
T Consensus       491 ~~~~~~~~~~~~  502 (504)
T PLN02760        491 ATEERVAELKSQ  502 (504)
T ss_pred             HHHHHHHHhhhc
Confidence            677777777543

>PRK08068 transaminase; Reviewed

Probab=98.42  E-value=0.00015  Score=71.00  Aligned_cols=153  Identities=12%  Similarity=0.026  Sum_probs=92.7

Q ss_pred             ccEEEEc-Ccc-cccccChHHHH---HHhhhcCCeEEEeccccc----c--c---cc--------eeeeec-c----CC-
Q psy10669        124 FDFLSSG-TTC-YSRCLDYARFR---QICDETDSIMFADMSHIS----G--L---IA--------GVKGVT-K----TG-  175 (337)
Q Consensus       124 pklII~~-~S~-~~~~~d~~~l~---eia~~~ga~l~vD~AH~~----G--l---i~--------g~~~T~-~----~G-  175 (337)
                      +++|++. +.+ -+...+.+++.   ++|+++++++++|+++.-    |  .   +.        .++.|. |    .| 
T Consensus       168 ~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~Gl  247 (389)
T PRK08068        168 AKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGW  247 (389)
T ss_pred             ceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCccc
Confidence            6777776 433 24777876555   578899999999999831    1  0   11        112222 2    13 


Q ss_pred             --chhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCe
Q psy10669        176 --EKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVH  251 (337)
Q Consensus       176 --g~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h  251 (337)
                        |+++.  ++.+.+.....+...+.+.+.. .+...++.+- ....+..++++.++.+.+.+.|.+.|+++.. ...+.
T Consensus       248 RiG~~~~~~~l~~~l~~~~~~~~~~~~~~~q-~~~~~~l~~~-~~~~~~~~~~~~~~r~~~~~~L~~~g~~~~~-~~g~~  324 (389)
T PRK08068        248 RVAFAVGNESVIEAINLLQDHLFVSLFGAIQ-DAAIEALLSD-QSCVAELVARYESRRNAFISACREIGWEVDA-PKGSF  324 (389)
T ss_pred             eeEeEecCHHHHHHHHHHHhhccCCCChHHH-HHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHCCCcccC-CCeeE
Confidence              66655  5666666543333233332222 2333333221 1234677888889999999999999987653 23345


Q ss_pred             EEEEEecCCCcchHHHHHHHh-hcCceecc
Q psy10669        252 LILIDLRKNKLTGSKVELVLE-EIAIACNK  280 (337)
Q Consensus       252 ~v~V~~~~~~~~~~~~~~~L~-~~gI~v~~  280 (337)
                      .+++.+.. +.+..++.+.|. ++||.+.+
T Consensus       325 ~~~v~~~~-~~~~~~~~~~l~~~~gi~v~p  353 (389)
T PRK08068        325 FAWMPVPK-GYTSEQFADLLLEKAHVAVAP  353 (389)
T ss_pred             EEEEECCC-CCCHHHHHHHHHHhCCEEEec
Confidence            56777754 346777877776 47999976

>PRK05967 cystathionine beta-lyase; Provisional

Probab=98.41  E-value=4.2e-06  Score=82.61  Aligned_cols=155  Identities=11%  Similarity=-0.018  Sum_probs=104.1

Q ss_pred             ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669         70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------  119 (337)
Q Consensus        70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------  119 (337)
                      |+...+.||    ++++.+-+.+.     ++.++||+.|..+++.+++++                              
T Consensus        62 gnPt~~~Le----~~la~le~~~~-----~v~~sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~  132 (395)
T PRK05967         62 GTPTTDALC----KAIDALEGSAG-----TILVPSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVE  132 (395)
T ss_pred             CChHHHHHH----HHHHHHhCCCC-----EEEECcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEE
Confidence            566667787    46778877764     689999999988888998765                              


Q ss_pred             ----------ccc---cccEEEEc-Ccc-cccccChHHHHHHhhhcCCeEEEeccccccccc-----e----eeeecc--
Q psy10669        120 ----------NNA---RFDFLSSG-TTC-YSRCLDYARFRQICDETDSIMFADMSHISGLIA-----G----VKGVTK--  173 (337)
Q Consensus       120 ----------~~a---~pklII~~-~S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----g----~~~T~~--  173 (337)
                                +.+   ++|+|+++ +++ .....|+++|.++|+++|++++||.++..++.-     |    +.|..|  
T Consensus       133 ~vd~~~~e~l~~al~~~TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD~t~a~p~~~~pl~~GaDivv~S~tKy~  212 (395)
T PRK05967        133 YYDPEIGAGIAKLMRPNTKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMDNTWATPLYFRPLDFGVDISIHAATKYP  212 (395)
T ss_pred             EeCCCCHHHHHHhcCcCceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEECCccCceecChhHcCCCEEEEeccccc
Confidence                      001   27888887 343 358889999999999999999999999887644     2    334433  


Q ss_pred             ------CCchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC
Q psy10669        174 ------TGEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR  239 (337)
Q Consensus       174 ------~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~  239 (337)
                            .||.+..  ++.+++..... . .|+...|.=|.+  .+..+  ....-++++..+||..+++.|.+.
T Consensus       213 ~Gh~d~~~G~v~~~~~~~~~l~~~~~-~-~G~~~~p~da~l--~~rgl--~Tl~lR~~~~~~na~~lA~~L~~h  280 (395)
T PRK05967        213 SGHSDILLGTVSANEKCWPQLLEAHG-T-LGLCAGPDDTYQ--ILRGL--RTMGIRLEHHRKSALEIARWLEGR  280 (395)
T ss_pred             CCCCCeeEEEEEcCHHHHHHHHHHHH-H-cCCCCCHHHHHH--HHcCc--ccHHHHHHHHHHHHHHHHHHHHhC
Confidence                  1454443  33344432211 1 344433333332  22233  356788999999999999999983

>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]

Probab=98.39  E-value=3.2e-05  Score=71.47  Aligned_cols=253  Identities=14%  Similarity=0.158  Sum_probs=157.2

Q ss_pred             hhcccceeeeccCCCCCHHHHHHHhhhhhhccCCCC---CCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecC
Q psy10669         27 HRQINGIELIASENFTSLAVLECLGSCLQNKYSEGL---PGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPY  103 (337)
Q Consensus        27 ~rq~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~---~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~  103 (337)
                      .|..-.++=|----.++++.++|+.. +..-|+..-   .|+=----+..+...-    +.+++|.|++      .++++
T Consensus        14 ~r~~iNv~PiQrGGiLt~eArkal~E-~gDGYSvCD~C~~Grldei~kPpI~~F~----~dlaeFlg~D------~~R~t   82 (382)
T COG1103          14 TRGFINVNPIQRGGILTEEARKALLE-WGDGYSVCDFCLEGRLDEITKPPIKDFL----EDLAEFLGMD------EVRVT   82 (382)
T ss_pred             hcCccccChhhccCcCCHHHHHHHHH-hcCCcchhhhhccCccccccCCcHHHHH----HHHHHHhCCc------eeeec
Confidence            33333344445566789999999974 355454321   1221111223343322    2478999998      48999


Q ss_pred             CCc-hhHHHHHHhhCCc------------------------------------------------c--cc--c-ccEEEE
Q psy10669        104 SGS-PANFAVCEKALPT------------------------------------------------N--NA--R-FDFLSS  129 (337)
Q Consensus       104 Sgt-~AN~~v~~aLl~~------------------------------------------------~--~a--~-pklII~  129 (337)
                      .|. .|-++|..+|+++                                                +  ..  + |.+.++
T Consensus        83 ~GARe~KfavMhal~~~gd~vV~D~~aHYttyvAAEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lall  162 (382)
T COG1103          83 AGAREAKFAVMHALCKEGDWVVVDSLAHYTTYVAAERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALL  162 (382)
T ss_pred             ccchhhHHHHHHHhccCCCEEEEcCcchHHHHHHHHhcCCeEEecCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEE
Confidence            995 8999999999874                                                1  11  2 677777


Q ss_pred             c--CcccccccChHHHHHHhhhcCCeEEEeccccccccc------e---eeeeccC-----C--chh-hh-hHHHHHhh-
Q psy10669        130 G--TTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA------G---VKGVTKT-----G--EKI-LY-DYEEKINN-  188 (337)
Q Consensus       130 ~--~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~------g---~~~T~~~-----G--g~i-~~-~l~~~i~~-  188 (337)
                      +  .+.|+..-|.+.+.+||+++|.+|++..|-+.|-+.      |   +++++||     |  |++ +. ++++.+-+ 
T Consensus       163 Th~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grmpvs~ke~g~DFiVgSGHKsmAAs~PiGvl~~~eE~ae~V~r~  242 (382)
T COG1103         163 THVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVGRMPVSGKEIGADFIVGSGHKSMAASAPIGVLAMSEEWAEIVLRR  242 (382)
T ss_pred             eccCCCcCCchhhHHHHHHHHHcCCceEeecceeeccccccccccCCCEEEecCccchhccCCeeEEeehhHHHHHHHhh
Confidence            7  567999999999999999999999999999999888      1   3455543     1  333 23 45553321 


Q ss_pred             c--cCCCC---------CCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC-CEEecCCCCCeEEEEE
Q psy10669        189 A--VFPSL---------QGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG-YHVVTGGTDVHLILID  256 (337)
Q Consensus       189 ~--~~p~~---------~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G-~~v~~~~t~~h~v~V~  256 (337)
                      +  -||--         .|.|....||+.-.-...+      ...++.++++++|.+.|.+.| +.-.+....+|-+ +.
T Consensus       243 Sg~~~~~KEvellGCT~rGapivTlmASfP~V~eRV------krWdeEv~kaR~fv~elEkigg~~qlG~rPk~HdL-m~  315 (382)
T COG1103         243 SGRAFPKKEVELLGCTVRGAPIVTLMASFPHVVERV------KRWDEEVEKARWFVAELEKIGGVKQLGERPKNHDL-MK  315 (382)
T ss_pred             cccccccceeeeecccccCchHHHHHhcCHHHHHHH------HHHHHHHHHHHHHHHHHHHhhhHHHhCCCCcccce-ee
Confidence            1  13321         3666666666655544433      346778999999999999975 8777655667743 44


Q ss_pred             ecCCCcchHHHHHHHhhcCceeccCc------ccchhhhh---HhhhCCCHH
Q psy10669        257 LRKNKLTGSKVELVLEEIAIACNKNT------GISLAAEI---QAISGPKLV  299 (337)
Q Consensus       257 ~~~~~~~~~~~~~~L~~~gI~v~~~~------girig~~~---~t~~G~~~~  299 (337)
                      +....  -.++++.-.+.|.+...-.      |||=|+.-   ....|++-+
T Consensus       316 Fetp~--f~eIakk~~r~gyFlY~ELK~RgI~GI~~G~Tk~~K~svyGl~~E  365 (382)
T COG1103         316 FETPV--FHEIAKKHKRKGYFLYEELKKRGIHGIQPGQTKYFKLSVYGLSWE  365 (382)
T ss_pred             ecCch--HHHHHHhCcCCceeeHHHHHhcCccccccCceeEEEEEeecCCHH
Confidence            43332  3455555444566654322      77766431   223565533

>PRK06348 aspartate aminotransferase; Provisional

Probab=98.39  E-value=0.00018  Score=70.47  Aligned_cols=263  Identities=9%  Similarity=-0.010  Sum_probs=137.7

Q ss_pred             chhhhhhhhhhcHHHHHHHHHHHhhcccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHH
Q psy10669          4 STMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVA   81 (337)
Q Consensus         4 ~~~~~~~l~~~d~~~~~~~~~e~~rq~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~   81 (337)
                      ++++.+.+....+.+..-+.+........++|-..++-.  ++.+.+++...+...       ...|.-..-..++....
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~-------~~~Y~~~~G~~~lr~~i   75 (384)
T PRK06348          3 NKFLAKKYQQMEVNIMAEIATLAKKFPDIIDLSLGDPDLITDESIINAAFEDAKKG-------HTRYTDSGGDVELIEEI   75 (384)
T ss_pred             chHHHHHHhcCCccHHHHHHHHHHhcCCcEEcCCCCCCCCCCHHHHHHHHHHHhcC-------CCCCCCCCCcHHHHHHH
Confidence            456655555555555444443332233457766666554  466666554332211       01122222122333222


Q ss_pred             HHHHHhhcC--CCCCCCcceeecCCC-chhHHHHHHhhCCc---------------------------------------
Q psy10669         82 QQRSLKAFN--LDPEQWGCNVQPYSG-SPANFAVCEKALPT---------------------------------------  119 (337)
Q Consensus        82 ~~~~a~lfg--~~~~~~~~~v~~~Sg-t~AN~~v~~aLl~~---------------------------------------  119 (337)
                      .+.+.+-+|  .+.    -+|.+++| ++|...++.+++++                                       
T Consensus        76 a~~~~~~~~~~~~~----~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d  151 (384)
T PRK06348         76 IKYYSKNYDLSFKR----NEIMATVGACHGMYLALQSILDPGDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQIN  151 (384)
T ss_pred             HHHHHHHhCCCCCh----hhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCC
Confidence            223333233  343    25778888 56777777887654                                       


Q ss_pred             --cc-----ccccEEEEc-Ccc-cccccC---hHHHHHHhhhcCCeEEEeccccccccc----------------eeeee
Q psy10669        120 --NN-----ARFDFLSSG-TTC-YSRCLD---YARFRQICDETDSIMFADMSHISGLIA----------------GVKGV  171 (337)
Q Consensus       120 --~~-----a~pklII~~-~S~-~~~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~----------------g~~~T  171 (337)
                        .+     .++|+|++. +.+ .+...+   .++|.++|+++|+++++|+++.--...                .+..|
T Consensus       152 ~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S  231 (384)
T PRK06348        152 VKKLEALITSKTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAGMPERTITFGS  231 (384)
T ss_pred             HHHHHHhhCcCccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCccchhhcCCCcCcEEEEec
Confidence              00     125766664 322 235555   445667789999999999997531111                11223


Q ss_pred             c-c-------CCchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-C
Q psy10669        172 T-K-------TGEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-G  240 (337)
Q Consensus       172 ~-~-------~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G  240 (337)
                      . |       +-|+++.  ++.+.+......... +++.....+++.++.+. +...++.++...++.+++.+.|.+. |
T Consensus       232 fSK~~~l~GlRiG~~v~~~~~~~~~~~~~~~~~~-~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~r~~~~~~~L~~~~~  309 (384)
T PRK06348        232 FSKDFAMTGWRIGYVIAPDYIIETAKIINEGICF-SAPTISQRAAIYALKHR-DTIVPLIKEEFQKRLEYAYKRIESIPN  309 (384)
T ss_pred             chhccCCccccceeeecCHHHHHHHHHHHHhccC-CCCHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            2 2       2366655  466655543221112 23334444444444332 1123456666777788888888874 6


Q ss_pred             CEEecCCCCCeEEEEEecCCCcchHHHHHHH-hhcCceecc
Q psy10669        241 YHVVTGGTDVHLILIDLRKNKLTGSKVELVL-EEIAIACNK  280 (337)
Q Consensus       241 ~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L-~~~gI~v~~  280 (337)
                      +.+.. ...+-.+++.+...+.+..++...| +++||.+.+
T Consensus       310 ~~~~~-p~gg~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~p  349 (384)
T PRK06348        310 LSLHP-PKGSIYAFINIKKTGLSSVEFCEKLLKEAHVLVIP  349 (384)
T ss_pred             ceecc-CCeeEEEEEecccCCCCHHHHHHHHHHhCCEEEcC
Confidence            66543 1234456777765455677777665 568999885

>PRK08247 cystathionine gamma-synthase; Reviewed

Probab=98.38  E-value=1.2e-05  Score=78.56  Aligned_cols=173  Identities=16%  Similarity=0.083  Sum_probs=104.7

Q ss_pred             ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669         70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------  119 (337)
Q Consensus        70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------  119 (337)
                      ++...+++|    +++++++|+++     ++.+.||+.|...++ +++++                              
T Consensus        50 ~~pt~~~le----~~la~l~g~~~-----~~~~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~  119 (366)
T PRK08247         50 GNPTRGVLE----QAIADLEGGDQ-----GFACSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLFEEHWKKWNVRFV  119 (366)
T ss_pred             CCchHHHHH----HHHHHHhCCCc-----EEEEcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHHHHHhhccCceEE
Confidence            445667888    58899999986     688999998887765 56543                              


Q ss_pred             ----------ccc---cccEEEEc-Cccc-ccccChHHHHHHhhhcCCeEEEeccccccccc-----e---e-eeecc--
Q psy10669        120 ----------NNA---RFDFLSSG-TTCY-SRCLDYARFRQICDETDSIMFADMSHISGLIA-----G---V-KGVTK--  173 (337)
Q Consensus       120 ----------~~a---~pklII~~-~S~~-~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----g---~-~~T~~--  173 (337)
                                +.+   ++|+|++. +++- ....|+++|.++|+++|+++++|+++..++..     +   + .|..|  
T Consensus       120 ~vd~~d~~~l~~~i~~~tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD~t~~~~~~~~p~~~g~di~i~S~sK~~  199 (366)
T PRK08247        120 YVNTASLKAIEQAITPNTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFYTPVLQRPLEEGADIVIHSATKYL  199 (366)
T ss_pred             EECCCCHHHHHHhcccCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccccCchhcCCcEEEeecceec
Confidence                      111   26888774 4432 35578888999999999999999999776644     1   1 22222  


Q ss_pred             ------CCchhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEE
Q psy10669        174 ------TGEKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHV  243 (337)
Q Consensus       174 ------~Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v  243 (337)
                            .||+++.   ++.+.+..... . .|....+..+.++.  ..+  .......++..+|++.+++.|.+. ++..
T Consensus       200 ~g~~d~~~G~iv~~~~~l~~~~~~~~~-~-~g~~~s~~~a~l~~--~~l--~tl~~r~~~~~~~a~~l~~~L~~~p~v~~  273 (366)
T PRK08247        200 GGHNDVLAGLVVAKGQELCERLAYYQN-A-AGAVLSPFDSWLLI--RGM--KTLALRMRQHEENAKAIAAFLNEQPGVTD  273 (366)
T ss_pred             cCCCceeeeEEecChHHHHHHHHHHHH-h-cCCCCChHHHHHHH--hcc--CcHHHHHHHHHHHHHHHHHHHHhCCCeeE
Confidence                  3566654   35444432211 1 11111222222222  122  134566777899999999999984 7764


Q ss_pred             ecCCCCCeEEEEEec
Q psy10669        244 VTGGTDVHLILIDLR  258 (337)
Q Consensus       244 ~~~~t~~h~v~V~~~  258 (337)
                      +......-++.+.+.
T Consensus       274 v~~P~~gg~~sf~~~  288 (366)
T PRK08247        274 VLYPGRGGMLSFRLQ  288 (366)
T ss_pred             EecCCcCcEEEEEEC
Confidence            321123445555553

>PRK07671 cystathionine beta-lyase; Provisional

Probab=98.36  E-value=8.3e-06  Score=80.07  Aligned_cols=154  Identities=14%  Similarity=0.102  Sum_probs=99.2

Q ss_pred             ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669         70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------  119 (337)
Q Consensus        70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------  119 (337)
                      ++...+++|    +++++++|.++     ++.+.||+.|+.+++ +++++                              
T Consensus        48 ~~p~~~~Le----~~lA~l~g~~~-----~~~~~sG~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~  117 (377)
T PRK07671         48 GNPTRAALE----ELIAVLEGGHA-----GFAFGSGMAAITAVM-MLFSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHT  117 (377)
T ss_pred             CChHHHHHH----HHHHHHhCCCc-----eEEeCCHHHHHHHHH-HHhCCCCEEEECCCccchHHHHHHHHHhcCCeEEE
Confidence            455567787    58899999886     688999988876665 45443                              


Q ss_pred             ----------ccc---cccEEEEc-Ccc-cccccChHHHHHHhhhcCCeEEEeccccccccc-----e---e-eeecc--
Q psy10669        120 ----------NNA---RFDFLSSG-TTC-YSRCLDYARFRQICDETDSIMFADMSHISGLIA-----G---V-KGVTK--  173 (337)
Q Consensus       120 ----------~~a---~pklII~~-~S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----g---~-~~T~~--  173 (337)
                                +.+   ++|+|++. +++ .+...|+++|.++|+++|+++++|+++..+...     +   + .|..|  
T Consensus       118 ~v~~~d~~~l~~ai~~~tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD~a~~~~~~~~p~~~g~Divv~S~sK~l  197 (377)
T PRK07671        118 FVDTSNLEEVEEAIRPNTKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVDNTFMTPYWQSPISLGADIVLHSATKYL  197 (377)
T ss_pred             EECCCCHHHHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCCccccCChhhhCCeEEEecCcccc
Confidence                      101   26777765 433 357889999999999999999999999876544     1   2 22222  


Q ss_pred             ------CCchhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC
Q psy10669        174 ------TGEKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR  239 (337)
Q Consensus       174 ------~Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~  239 (337)
                            .||+++.   ++.+++.... . ..|+...+.-+.++.  ..+  .....++++..+|++.|++.|.+.
T Consensus       198 ~G~~~~~~G~~v~~~~~l~~~~~~~~-~-~~g~~~~~~~a~l~~--~~l--~tl~~R~~~~~~na~~la~~L~~~  266 (377)
T PRK07671        198 GGHSDVVAGLVVVNSPELAEDLHFVQ-N-STGGILGPQDSWLLL--RGL--KTLGIRMEEHETNSRAIAEFLNNH  266 (377)
T ss_pred             cCCccceeEEEEeCcHHHHHHHHHHH-H-hhcCCCCHHHHHHHH--cCc--ChHHHHHHHHHHHHHHHHHHHHcC
Confidence                  2465543   3555444321 1 123333343333322  222  235568889999999999999973

>PRK01688 histidinol-phosphate aminotransferase; Provisional

Probab=98.35  E-value=4.5e-05  Score=73.88  Aligned_cols=220  Identities=15%  Similarity=0.086  Sum_probs=126.9

Q ss_pred             cceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhH
Q psy10669         31 NGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPAN  109 (337)
Q Consensus        31 ~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN  109 (337)
                      ..+.|-+.||..+|......  ...++|.+    .+       ..++    ++.+++.+|.+.    -+|.+++| +++.
T Consensus        29 ~~~~l~~Nenp~~~~~~~~~--~~~~~Yp~----~~-------~~~l----~~~~a~~~g~~~----~~I~~~~Gs~e~i   87 (351)
T PRK01688         29 GDVWLNANEYPTAVEFQLTQ--QTLNRYPE----CQ-------PKAV----IENYAAYAGVKP----EQVLVSRGADEGI   87 (351)
T ss_pred             CceEecCCCCCCCCChhhcc--cccccCCC----CC-------hHHH----HHHHHHHhCCCH----HHEEEcCCHHHHH
Confidence            34778888888744322111  11234421    11       1233    346778899886    36889898 4676


Q ss_pred             HHHHHhhCCc----------------------------------------cc----ccccEEEEc-Ccc-cccccChHHH
Q psy10669        110 FAVCEKALPT----------------------------------------NN----ARFDFLSSG-TTC-YSRCLDYARF  143 (337)
Q Consensus       110 ~~v~~aLl~~----------------------------------------~~----a~pklII~~-~S~-~~~~~d~~~l  143 (337)
                      ..++.+++++                                        .+    .++|+|++. +.+ -+...+.+++
T Consensus        88 ~~~~~~~~~~g~~~vli~~P~y~~y~~~~~~~G~~~~~v~~~~~~~~d~~~l~~~~~~~~lv~l~nPnNPTG~~~~~~~l  167 (351)
T PRK01688         88 ELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVEIRTVPTLDNWQLDLPAIADNLDGVKVVYVCSPNNPTGNLINPQDL  167 (351)
T ss_pred             HHHHHHhcCCCCCEEEEcCCCHHHHHHHHHHcCCEEEEeecCCCCCCCHHHHHHhccCCcEEEEeCCCCCCCCCCCHHHH
Confidence            6666777532                                        00    125766665 433 2588888888


Q ss_pred             HHHhhhc--CCeEEEecccccc--------ccc-----eeeeeccC-----C---chhhh--hHHHHHhhccCCCCCCCC
Q psy10669        144 RQICDET--DSIMFADMSHISG--------LIA-----GVKGVTKT-----G---EKILY--DYEEKINNAVFPSLQGGP  198 (337)
Q Consensus       144 ~eia~~~--ga~l~vD~AH~~G--------li~-----g~~~T~~~-----G---g~i~~--~l~~~i~~~~~p~~~g~~  198 (337)
                      .+|++..  +.++++|+|+.-=        ++.     .+..|..|     |   |++++  ++.+.+++...|.-   .
T Consensus       168 ~~l~~~~~~~~~vivDEay~~f~~~~s~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~~~~~i~~l~~~~~~~~---v  244 (351)
T PRK01688        168 RTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLVILRTLSKAFALAGLRCGFTLANEEVINLLLKVIAPYP---L  244 (351)
T ss_pred             HHHHHhCCCCcEEEEECchhhcCCCCChHHHHhhCCCEEEEecchHhhcCHHHHHhHHhCCHHHHHHHHhccCCCC---C
Confidence            8776532  6899999997421        111     12233322     2   56655  57777776544432   2


Q ss_pred             cHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCE-EecCCCCCeEEEEEecCCCcchHHHHHHHhhcCc
Q psy10669        199 HNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYH-VVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAI  276 (337)
Q Consensus       199 ~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~-v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI  276 (337)
                      +.+..++...++..-.....++.++++.++.+++.+.|.+. |+. +..  ++...+++.+.    +..++.+.|.+.||
T Consensus       245 ~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p--s~~nfi~~~~~----~~~~l~~~L~~~gi  318 (351)
T PRK01688        245 STPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALKEIPCVEQVFD--SETNYILARFT----ASSAVFKSLWDQGI  318 (351)
T ss_pred             CHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECC--CCCcEEEEEcC----CHHHHHHHHHHCCe
Confidence            22222222223321101234566778888888999999886 664 433  45556777764    35677888888899


Q ss_pred             eecc
Q psy10669        277 ACNK  280 (337)
Q Consensus       277 ~v~~  280 (337)
                      .+..
T Consensus       319 ~vr~  322 (351)
T PRK01688        319 ILRD  322 (351)
T ss_pred             EEEE
Confidence            9875

>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase

Probab=98.35  E-value=6.5e-06  Score=81.87  Aligned_cols=87  Identities=14%  Similarity=0.023  Sum_probs=66.9

Q ss_pred             ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669         70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------  119 (337)
Q Consensus        70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------  119 (337)
                      ++...+++|    +++++++|.++     .+.++||+.|+..++.+++++                              
T Consensus        55 ~~p~~~~le----~~lA~l~g~~~-----~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~  125 (418)
T TIGR01326        55 MNPTTDVLE----QRIAALEGGVA-----ALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVR  125 (418)
T ss_pred             CChhHHHHH----HHHHHHhCCCe-----EEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcCcEEE
Confidence            445566777    58899999875     688999999999888888654                              


Q ss_pred             ----------ccc---cccEEEEcCccc--ccccChHHHHHHhhhcCCeEEEecccccccc
Q psy10669        120 ----------NNA---RFDFLSSGTTCY--SRCLDYARFRQICDETDSIMFADMSHISGLI  165 (337)
Q Consensus       120 ----------~~a---~pklII~~~S~~--~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli  165 (337)
                                +.+   ++++|++....+  +...|+++|.++|+++|+++++|++|..|+.
T Consensus       126 ~v~~~d~~~l~~~l~~~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD~t~~~~~~  186 (418)
T TIGR01326       126 FVDPDDPEEFEKAIDENTKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVDNTFATPYL  186 (418)
T ss_pred             EECCCCHHHHHHhcCcCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCchhhc
Confidence                      001   267887763233  3667999999999999999999999998754

This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.

>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal)

Probab=98.34  E-value=5.8e-06  Score=81.41  Aligned_cols=192  Identities=15%  Similarity=0.118  Sum_probs=119.7

Q ss_pred             ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669         70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------  119 (337)
Q Consensus        70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------  119 (337)
                      |+...+.+|    ++++++-|++.     ++.+.||..|..+++.+++++                              
T Consensus        53 gnPt~~~le----~~la~Le~g~~-----a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~  123 (386)
T PF01053_consen   53 GNPTVRALE----QRLAALEGGED-----ALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVEVT  123 (386)
T ss_dssp             C-HHHHHHH----HHHHHHHT-SE-----EEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEE
T ss_pred             ccccHHHHH----HHHHHhhcccc-----eeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcccCcEEE
Confidence            667778898    57899999975     788999999998888999875                              


Q ss_pred             --------cc--c---cccEEEEc-Cccc-ccccChHHHHHHhhhcC-CeEEEeccccccccc-----e----eeeecc-
Q psy10669        120 --------NN--A---RFDFLSSG-TTCY-SRCLDYARFRQICDETD-SIMFADMSHISGLIA-----G----VKGVTK-  173 (337)
Q Consensus       120 --------~~--a---~pklII~~-~S~~-~~~~d~~~l~eia~~~g-a~l~vD~AH~~Gli~-----g----~~~T~~-  173 (337)
                              ++  +   ++++|++. +|+- ....|++++.++|+++| ++++||.+...++.-     |    +.|.+| 
T Consensus       124 ~~d~~d~~~l~~~l~~~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vVDnT~atp~~~~pL~~GaDivv~S~TKy  203 (386)
T PF01053_consen  124 FVDPTDLEALEAALRPNTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVVDNTFATPYNQNPLELGADIVVHSATKY  203 (386)
T ss_dssp             EESTTSHHHHHHHHCTTEEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEEECTTTHTTTC-GGGGT-SEEEEETTTT
T ss_pred             EeCchhHHHHHhhccccceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEeeccccceeeeccCcCCceEEEeecccc
Confidence                    11  1   27889887 4443 38899999999999999 999999999887654     2    334433 


Q ss_pred             -------CCchhhh----hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CC
Q psy10669        174 -------TGEKILY----DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GY  241 (337)
Q Consensus       174 -------~Gg~i~~----~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~  241 (337)
                             .||.++.    ++.+++....  ...|+...|.-|.+..  +-+  ..+..++++..+||+++++.|.+. .+
T Consensus       204 l~Ghsdv~~G~vv~~~~~~~~~~l~~~~--~~~G~~~~p~da~ll~--rgl--~Tl~~R~~~~~~nA~~lA~~L~~hp~V  277 (386)
T PF01053_consen  204 LSGHSDVMGGAVVVNGSSELYDRLREFR--RLLGATLSPFDAWLLL--RGL--RTLPLRMERQNENAEALAEFLEEHPKV  277 (386)
T ss_dssp             TTTSSSE-EEEEEESSHHHHHHHHHHHH--HHHT-B--HHHHHHHH--HHH--TTHHHHHHHHHHHHHHHHHHHHTSTTE
T ss_pred             ccCCcceeeEEEEECchhhhhhhhcchh--hhcCccchHHHHHHHh--cCC--CcHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence                   2666653    3555544321  2233444444443322  233  357889999999999999999984 33


Q ss_pred             E-EecCC---------------CCCeEEEEEecCCCcchHHHHHHHhhcCceec
Q psy10669        242 H-VVTGG---------------TDVHLILIDLRKNKLTGSKVELVLEEIAIACN  279 (337)
Q Consensus       242 ~-v~~~~---------------t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~  279 (337)
                      + |...+               .-..++.+.+...   ...+.+.++...+...
T Consensus       278 ~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~---~~~~~~f~~~l~l~~~  328 (386)
T PF01053_consen  278 KRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGG---EEAARRFLDALKLFSI  328 (386)
T ss_dssp             EEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSH---HHHHHHHHHH-SSSEE
T ss_pred             CeEEEcccccccceeeeeecccccCceeEEEeccc---hhhhHhHHhhhhhHhh
Confidence            3 33221               1122666666542   2467777777665544

Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....

>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional

Probab=98.33  E-value=4.9e-05  Score=76.61  Aligned_cols=156  Identities=16%  Similarity=0.169  Sum_probs=94.5

Q ss_pred             EEEEcCcccccccC-------hHHHHHHhhhcCCeEEEeccccccc--cc--------ee----eeecc--------CCc
Q psy10669        126 FLSSGTTCYSRCLD-------YARFRQICDETDSIMFADMSHISGL--IA--------GV----KGVTK--------TGE  176 (337)
Q Consensus       126 lII~~~S~~~~~~d-------~~~l~eia~~~ga~l~vD~AH~~Gl--i~--------g~----~~T~~--------~Gg  176 (337)
                      .||+. +.+++.++       ++.++++|+++|++||+|+.|+ |+  .+        |+    ...+|        -|+
T Consensus       234 avIvE-pv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~t-G~GRtG~~~a~e~~gv~PDivt~gK~lggG~~Piga  311 (459)
T PRK11522        234 AVILE-PIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQT-GMGRTGKMFACEHENVQPDILCLAKALGGGVMPIGA  311 (459)
T ss_pred             EEEEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEecccee-cCCccchhhhhhccCCCCCEEEechhhhCCCcccee
Confidence            55654 56665433       5678899999999999999995 53  22        11    11122        233


Q ss_pred             hhhh-hHHHHHhhccCCCC-CCCC--cHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCE-Eec-CCC
Q psy10669        177 KILY-DYEEKINNAVFPSL-QGGP--HNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYH-VVT-GGT  248 (337)
Q Consensus       177 ~i~~-~l~~~i~~~~~p~~-~g~~--~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~-v~~-~~t  248 (337)
                      ++.+ ++.+.....  |+. .+|.  |+...|+..+++..+.+   ++..+++.++.++|.+.|++.  .+. ++. --.
T Consensus       312 v~~~~~i~~~~~~~--~~~~~~T~~gnp~~~Aaala~L~~i~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~VrG  386 (459)
T PRK11522        312 TIATEEVFSVLFDN--PFLHTTTFGGNPLACAAALATINVLLE---QNLPAQAEQKGDYLLDGFRQLAREYPDLVQEARG  386 (459)
T ss_pred             EEEcHHHHHHhccC--CcccCCCCCCCHHHHHHHHHHHHHHhc---chHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEe
Confidence            3333 444433211  222 2333  66677776677776643   257889999999999999874  343 221 112


Q ss_pred             CCeEEEEEecCCCcchHHHHHHHhhcCceeccC----cccchhhh
Q psy10669        249 DVHLILIDLRKNKLTGSKVELVLEEIAIACNKN----TGISLAAE  289 (337)
Q Consensus       249 ~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~----~girig~~  289 (337)
                      ...++.|.+.+.. .+..+.+.|.+.||.+...    ..+|+.-+
T Consensus       387 ~Gl~~giel~~~~-~~~~i~~~l~~~Gvl~~~~~~~~~~lr~~Pp  430 (459)
T PRK11522        387 KGMLMAIEFVDNE-IGYNFASEMFRQRVLVAGTLNNAKTIRIEPP  430 (459)
T ss_pred             ceeEEEEEecCch-HHHHHHHHHHHCCeEEEecCCCCCEEEEECC
Confidence            4667778776543 3556677777789998753    14666443

>PRK06290 aspartate aminotransferase; Provisional

Probab=98.33  E-value=0.00042  Score=68.79  Aligned_cols=247  Identities=13%  Similarity=0.052  Sum_probs=135.1

Q ss_pred             cceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCC---CCCCcceeecCCC
Q psy10669         31 NGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLD---PEQWGCNVQPYSG  105 (337)
Q Consensus        31 ~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~---~~~~~~~v~~~Sg  105 (337)
                      ..++|-..++..  +|.+.+++...+...-..+|+-    .|.   .++-....+.+.+.+|.+   ..   .+|..++|
T Consensus        45 ~~i~L~~g~p~~~~~~~~~~~l~~~~~~~~~~~Y~~----~G~---~~lr~aia~~~~~~~g~~~~~~~---~~I~it~G  114 (410)
T PRK06290         45 ELIDMGVGEPDEMADESVVEVLCEEAKKPENRGYAD----NGI---QEFKEAAARYMEKVFGVKDIDPV---TEVIHSIG  114 (410)
T ss_pred             CeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC----CCc---HHHHHHHHHHHHHHcCCCcCCCc---ceEEEccC
Confidence            357777777764  7778888765432110111221    222   233221122333334543   31   15889999


Q ss_pred             c-hhHHHHHHhhCCc-----------------------------------------cc-----ccccEEEEc-Ccc-ccc
Q psy10669        106 S-PANFAVCEKALPT-----------------------------------------NN-----ARFDFLSSG-TTC-YSR  136 (337)
Q Consensus       106 t-~AN~~v~~aLl~~-----------------------------------------~~-----a~pklII~~-~S~-~~~  136 (337)
                      + ++...++.+++++                                         ++     .++|+|++. +++ -+.
T Consensus       115 s~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~nP~NPTG~  194 (410)
T PRK06290        115 SKPALAMLPSCFINPGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKEKAKLLYLNYPNNPTGA  194 (410)
T ss_pred             HHHHHHHHHHHhCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhcccceEEEEECCCCCCCc
Confidence            5 5666666777653                                         00     126788877 533 247


Q ss_pred             ccChHH---HHHHhhhcCCeEEEeccccccccc----------------eeeeec-c----CC---chhhh--hHHHHHh
Q psy10669        137 CLDYAR---FRQICDETDSIMFADMSHISGLIA----------------GVKGVT-K----TG---EKILY--DYEEKIN  187 (337)
Q Consensus       137 ~~d~~~---l~eia~~~ga~l~vD~AH~~Gli~----------------g~~~T~-~----~G---g~i~~--~l~~~i~  187 (337)
                      ..+.++   |.++|+++|++|++|+++.--...                .+..+. |    .|   |+++.  ++.+.+.
T Consensus       195 v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~~~~l~~~l~  274 (410)
T PRK06290        195 VATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVGNELIVKAFA  274 (410)
T ss_pred             CCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCCCcChhcCCCccccEEEEeechhhcCCchhheEeEEeCHHHHHHHH
Confidence            777654   556789999999999998642211                112222 1    13   77665  4666555


Q ss_pred             hccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCC------
Q psy10669        188 NAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNK------  261 (337)
Q Consensus       188 ~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~------  261 (337)
                      ....+...++ ..+...++..++.+  ....++.++++.++.+++.+.|.+.|+.+... ..+-.+++.+...-      
T Consensus       275 ~~~~~~~~~~-~~~~q~aa~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p-~g~f~l~v~lp~~~~~~~~~  350 (410)
T PRK06290        275 TVKDNNDSGQ-FIAIQKAGIYALDH--PEITEKIREKYSRRLDKLVKILNEVGFKAEMP-GGTFYLYVKAPKGTKSGIKF  350 (410)
T ss_pred             HHHhccccCC-cHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHHHHHHHhCCCeecCC-CeeeEEEEECCCccccCCCC
Confidence            4433322222 22333333333322  11235667888899999999999999887642 23455667775421      


Q ss_pred             cchHHHHHHHhhc-CceeccCc----ccchhhhhH
Q psy10669        262 LTGSKVELVLEEI-AIACNKNT----GISLAAEIQ  291 (337)
Q Consensus       262 ~~~~~~~~~L~~~-gI~v~~~~----girig~~~~  291 (337)
                      .+..++...|.+. ++.+.+-.    .+||+....
T Consensus       351 ~~~~~~~~~Ll~~~~v~~~p~~~~~~~lRi~~~~~  385 (410)
T PRK06290        351 ENAEEFSQYLIKEKLISTVPWDDAGHFLRFSVTFE  385 (410)
T ss_pred             CCHHHHHHHHHHhCCEEEECCccccCeEEEEEEcc
Confidence            2456676766654 55543311    578865443

>PRK04612 argD acetylornithine transaminase protein; Provisional

Probab=98.32  E-value=8e-05  Score=73.94  Aligned_cols=146  Identities=14%  Similarity=0.162  Sum_probs=89.0

Q ss_pred             hHHHHHHhhhcCCeEEEeccccccc--cc--------e----eeeecc-------CCchhhh-hHHHHHhhccCCCCCCC
Q psy10669        140 YARFRQICDETDSIMFADMSHISGL--IA--------G----VKGVTK-------TGEKILY-DYEEKINNAVFPSLQGG  197 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~~Gl--i~--------g----~~~T~~-------~Gg~i~~-~l~~~i~~~~~p~~~g~  197 (337)
                      +++|+++|+++|++||+|+.|+ |+  -+        +    +.+.+|       -|+++.. ++.+.+.......+++ 
T Consensus       210 l~~l~~l~~~~g~llI~DEv~t-g~gr~G~~~a~~~~~~~pdi~t~~K~l~~G~piga~~~~~~~~~~~~~~~~~~t~~-  287 (408)
T PRK04612        210 LARVRALCDQHDALLVLDEIQC-GMGRTGTLFAHWQEQVTPDIVTLAKALGGGFPIGAMLAGPKVAETMQFGAHGTTFG-  287 (408)
T ss_pred             HHHHHHHHHHcCCEEEEecccc-CCCcCCchhhhhhcCCCCCEEEEcchhcCCCceEEEEECHHHHhhhcCCCcCCCCC-
Confidence            6679999999999999999997 32  11        1    111122       2333333 5655555544444454 


Q ss_pred             CcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCEEecC-CCCCeEEEEEecCC-CcchHHHHHHHhh
Q psy10669        198 PHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYHVVTG-GTDVHLILIDLRKN-KLTGSKVELVLEE  273 (337)
Q Consensus       198 ~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~v~~~-~t~~h~v~V~~~~~-~~~~~~~~~~L~~  273 (337)
                      .++...++...++..+.+   ++..+++.++.++|.++|++.  .+.++.. -...-++-|.+... .-....+.+.|.+
T Consensus       288 ~~p~~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~l~~l~~~~~~i~~vrg~Gl~~~i~~~~~~~~~a~~i~~~l~~  364 (408)
T PRK04612        288 GNPLAAAVARVALRKLAS---PQIAANVARQSAALRAGLEALNAEFGVFAQVRGRGLMLGAVLAPAHAGQAGAILDLAAE  364 (408)
T ss_pred             CCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeccceEEEEEecCchhhHHHHHHHHHHH
Confidence            456666666666666543   367888999999999998873  2333321 12344555655421 1134566677888


Q ss_pred             cCceeccCc--ccchhhhh
Q psy10669        274 IAIACNKNT--GISLAAEI  290 (337)
Q Consensus       274 ~gI~v~~~~--girig~~~  290 (337)
                      .||.+.+..  .||+..+.
T Consensus       365 ~Gvlv~~~g~~~lRl~Ppl  383 (408)
T PRK04612        365 HGLLLLQAGPDVLRFVPAL  383 (408)
T ss_pred             CCeEEeeCCCCEEEEcCCc
Confidence            899986543  67776554

>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase

Probab=98.31  E-value=7.1e-05  Score=74.94  Aligned_cols=196  Identities=13%  Similarity=0.114  Sum_probs=118.8

Q ss_pred             HHHHHHHHHHHHHhhcCCCCCCCcceeecCCCc-hhHHHHHHhhC--C-c------------------------------
Q psy10669         74 IDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGS-PANFAVCEKAL--P-T------------------------------  119 (337)
Q Consensus        74 ~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt-~AN~~v~~aLl--~-~------------------------------  119 (337)
                      .-.++....+.+++++|.+....  .+..++|| .++..++.++-  + +                              
T Consensus       103 ~~~l~~~~e~~~~~~~G~~~~~~--a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~G~~pv~Vd~  180 (444)
T TIGR03531       103 LYKLTNKLVKDFLKLLGLRSIKS--AFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAGFEPRVIET  180 (444)
T ss_pred             HHHHHHHHHHHHHHHcCCCCCCE--EEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHcCCeEEEeee
Confidence            34455555568899999983211  45566777 57766666653  1 1                              


Q ss_pred             --------------ccc------cccEEEEc-Ccccc--cccChHHHHHHhhhcCCeEEEeccccccccc----------
Q psy10669        120 --------------NNA------RFDFLSSG-TTCYS--RCLDYARFRQICDETDSIMFADMSHISGLIA----------  166 (337)
Q Consensus       120 --------------~~a------~pklII~~-~S~~~--~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~----------  166 (337)
                                    +.+      +..++|++ ++.|.  ..-|+++|.++|+++|+++++|+||+.+..-          
T Consensus       181 ~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~~~~~~~~g~~  260 (444)
T TIGR03531       181 VLDGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNKYMELINKAIK  260 (444)
T ss_pred             eecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChhhhhhhhcccc
Confidence                          000      12344443 44453  6789999999999999999999999964411          


Q ss_pred             -e-----eeeecc------CCchhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHH
Q psy10669        167 -G-----VKGVTK------TGEKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASH  231 (337)
Q Consensus       167 -g-----~~~T~~------~Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~  231 (337)
                       |     +.+++|      .||+++.   ++.+.+... +|+..  +..+.. .+.++++.+-...++++.++-.+++++
T Consensus       261 ~Grad~vv~s~hK~l~~pg~Gg~I~~~d~el~~~i~~~-y~g~~--~~s~~~-~~~~~ll~~G~~g~~~li~~~~~~a~~  336 (444)
T TIGR03531       261 VGRVDAVVSSTDKNFMVPVGGAIIYSFDENFIQEISKS-YPGRA--SASPSL-DVLITLLSLGSKGYLELLKERKEMYKY  336 (444)
T ss_pred             ccCCCeEEEeCccCCCCCCCEEEEEECCHHHHHHHHHh-ccCCC--CChHHH-HHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence             1     223333      2566655   466666654 55533  223333 344455555557788999999999999


Q ss_pred             HHHHHHh----CCCEEecCCCCCeEEE-EEecCC-CcchHHHHHHHhhcCc
Q psy10669        232 LSDEMIK----RGYHVVTGGTDVHLIL-IDLRKN-KLTGSKVELVLEEIAI  276 (337)
Q Consensus       232 l~~~L~~----~G~~v~~~~t~~h~v~-V~~~~~-~~~~~~~~~~L~~~gI  276 (337)
                      +.+.|.+    .|-++.. -.+|+|-+ +.++.. +.+...+...|...+|
T Consensus       337 l~~~L~~l~~~~~~~~~~-~~~n~is~~~~~~~~~~~~~~~~g~~l~~~~v  386 (444)
T TIGR03531       337 LKELLQKLAERHGERLLD-TPENPISSAMTLSTLKGKDPTMLGSMLYSRRV  386 (444)
T ss_pred             HHHHHHHHHHhhCcEeec-CCCCceeEEEecccccccCHHHHHHHHHhCCC
Confidence            9999887    5777764 13666542 222211 2245666677765444

In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.

>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]

Probab=98.31  E-value=0.00021  Score=68.97  Aligned_cols=236  Identities=18%  Similarity=0.232  Sum_probs=147.0

Q ss_pred             cceeeeccC-CCC-CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCC-CCCCcceeecCCC-c
Q psy10669         31 NGIELIASE-NFT-SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLD-PEQWGCNVQPYSG-S  106 (337)
Q Consensus        31 ~~i~l~ase-n~~-~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~-~~~~~~~v~~~Sg-t  106 (337)
                      .-|.|+-++ ++. +|.|++|+...+.+- ..|||..    -..+.+.+-.    -.++=++-+ .++|   +.|..| -
T Consensus        26 DvlPmWVADMDf~~pp~i~~Al~~rvdhG-vfGY~~~----~~~~~~ai~~----w~~~r~~~~i~~e~---i~~~p~VV   93 (388)
T COG1168          26 DVLPMWVADMDFPTPPEIIEALRERVDHG-VFGYPYG----SDELYAAIAH----WFKQRHQWEIKPEW---IVFVPGVV   93 (388)
T ss_pred             CcceeeeecccCCCCHHHHHHHHHHHhcC-CCCCCCC----CHHHHHHHHH----HHHHhcCCCCCcce---EEEcCcch
Confidence            345555443 333 999999998764432 3566622    1122233322    222222221 2334   777777 5


Q ss_pred             hhHHHHHHhhCCc--------------------------------------------ccc----ccc-EEEEcCcc-ccc
Q psy10669        107 PANFAVCEKALPT--------------------------------------------NNA----RFD-FLSSGTTC-YSR  136 (337)
Q Consensus       107 ~AN~~v~~aLl~~--------------------------------------------~~a----~pk-lII~~~S~-~~~  136 (337)
                      .+...++.+|.++                                            +.+    ++| +|.|++-+ -++
T Consensus        94 pgi~~~I~~~T~~gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Gr  173 (388)
T COG1168          94 PGISLAIRALTKPGDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGR  173 (388)
T ss_pred             HhHHHHHHHhCcCCCeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCc
Confidence            6766667888654                                            111    134 55566433 468


Q ss_pred             ccChHHHH---HHhhhcCCeEEEeccccccccce-------------------eeeeccC---Cchh-----hh--hHHH
Q psy10669        137 CLDYARFR---QICDETDSIMFADMSHISGLIAG-------------------VKGVTKT---GEKI-----LY--DYEE  184 (337)
Q Consensus       137 ~~d~~~l~---eia~~~ga~l~vD~AH~~Gli~g-------------------~~~T~~~---Gg~i-----~~--~l~~  184 (337)
                      .+.-++|.   +||.+||+++|.|+=|.==++.|                   ++++.|.   .|+-     +.  +++.
T Consensus       174 vwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr~  253 (388)
T COG1168         174 VWTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELRA  253 (388)
T ss_pred             cccHHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHHHHH
Confidence            88877655   89999999999999997533332                   1222221   2222     22  3444


Q ss_pred             HHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCEEecCCCCCeEEEEEecCCCc
Q psy10669        185 KINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYHVVTGGTDVHLILIDLRKNKL  262 (337)
Q Consensus       185 ~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~v~~~~t~~h~v~V~~~~~~~  262 (337)
                      +..+.+--..+++|+.-++.|.-+|..+= ++=..+..+-+.+|-+++++.|.+.  ++++.. .-.|-+.++|++..++
T Consensus       254 ~~~~~l~~~~~~~~n~lg~~A~~aAY~~G-~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v~~-p~gTYL~WLD~r~l~l  331 (388)
T COG1168         254 KFLKRLKRNGLHGPSALGIIATEAAYNQG-EPWLDELLEYLKDNRDYVADFLNKHLPGVKVTE-PQGTYLAWLDCRELGL  331 (388)
T ss_pred             HHHHHHHHhcCCCCchHHHHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEec-CCCceeeeeeccccCC
Confidence            33333222446689999999988888764 2333677778889999999999994  898874 3457899999999999


Q ss_pred             chHHHHHH-HhhcCceecc
Q psy10669        263 TGSKVELV-LEEIAIACNK  280 (337)
Q Consensus       263 ~~~~~~~~-L~~~gI~v~~  280 (337)
                      +..+..+. |++++|.+++
T Consensus       332 ~d~~l~~~ll~~akVal~~  350 (388)
T COG1168         332 DDSELAEFLLEEAKVALSP  350 (388)
T ss_pred             ChHHHHHHHHHhhcEeccC
Confidence            87555555 4568999987

>PLN02590 probable tyrosine decarboxylase

Probab=98.31  E-value=0.00027  Score=72.49  Aligned_cols=183  Identities=17%  Similarity=0.149  Sum_probs=113.3

Q ss_pred             chHHHHHHHHHHHHHhhcCCCCCCC----cceeecCCCchhHHHHHHhh------------CCc----------------
Q psy10669         72 QFIDEIEIVAQQRSLKAFNLDPEQW----GCNVQPYSGSPANFAVCEKA------------LPT----------------  119 (337)
Q Consensus        72 ~~~~~lE~~~~~~~a~lfg~~~~~~----~~~v~~~Sgt~AN~~v~~aL------------l~~----------------  119 (337)
                      .-..++|..+.+-++++||.+...|    +--+..++||.||+..+.+-            .++                
T Consensus       166 Pa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KA  245 (539)
T PLN02590        166 PAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKA  245 (539)
T ss_pred             chhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHH
Confidence            3456899999999999999886322    12355566699997765442            011                


Q ss_pred             -------------------------------cc----c---cccEEEEc--CcccccccChHHHHHHhhhcCCeEEEecc
Q psy10669        120 -------------------------------NN----A---RFDFLSSG--TTCYSRCLDYARFRQICDETDSIMFADMS  159 (337)
Q Consensus       120 -------------------------------~~----a---~pklII~~--~S~~~~~~d~~~l~eia~~~ga~l~vD~A  159 (337)
                                                     .+    +   .|-+||.+  .+..+..-|+++|.+||+++|++|.||+|
T Consensus       246 a~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~g~WlHVDaA  325 (539)
T PLN02590        246 CLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKYGIWLHVDAA  325 (539)
T ss_pred             HHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCeEEEecc
Confidence                                           00    1   16566665  44467899999999999999999999999


Q ss_pred             ccccccc---------ee------eeeccC-------Cchhh-hh---HH-------HHHhhc------cCC----CCCC
Q psy10669        160 HISGLIA---------GV------KGVTKT-------GEKIL-YD---YE-------EKINNA------VFP----SLQG  196 (337)
Q Consensus       160 H~~Gli~---------g~------~~T~~~-------Gg~i~-~~---l~-------~~i~~~------~~p----~~~g  196 (337)
                      ++...+.         |+      +.-.||       .|+++ .+   +.       +.+...      .+.    .++.
T Consensus       326 ~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p~~cg~llvr~~~~l~~a~~~~~~YL~~~~~~~~~~~d~~d~~i~l  405 (539)
T PLN02590        326 YAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQTCSPLWVKDRYSLIDALKTNPEYLEFKVSKKDTVVNYKDWQISL  405 (539)
T ss_pred             hhhhhhcChhhHHHhcCCccCCEEEECchhhcCcCcCEEEEEecCHHHHHHHhhcCHHHhCCcccccccCCCccccCCCC
Confidence            8776544         21      111122       23332 21   21       223211      000    1121


Q ss_pred             CCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-CCCEEecCCCCCeEEEEEec
Q psy10669        197 GPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-RGYHVVTGGTDVHLILIDLR  258 (337)
Q Consensus       197 ~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~G~~v~~~~t~~h~v~V~~~  258 (337)
                      +=. .....+-.+++.+-...|.++.++.+++|++|.+.+.+ .+|+++.   +....+|.++
T Consensus       406 sRr-~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~---~~~l~iVcFr  464 (539)
T PLN02590        406 SRR-FRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVT---TRYFSLVCFR  464 (539)
T ss_pred             CCc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec---CCceEEEEEE
Confidence            211 24455556666665678899999999999999999988 5899986   2334445444

>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=98.30  E-value=1.2e-05  Score=80.37  Aligned_cols=88  Identities=17%  Similarity=0.031  Sum_probs=68.4

Q ss_pred             ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669         70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------  119 (337)
Q Consensus        70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------  119 (337)
                      ++.....+|    ++++++.|.++     .+.+.||+.|+..++.+++++                              
T Consensus        62 ~~p~~~~Le----~~lA~leg~~~-----al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~  132 (431)
T PRK08248         62 MNPTTDVFE----KRIAALEGGIG-----ALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVK  132 (431)
T ss_pred             CCchHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEEEE
Confidence            456677888    57899999876     688999999988888887654                              


Q ss_pred             ----------ccc---cccEEEEc-Ccc-cccccChHHHHHHhhhcCCeEEEeccccccccc
Q psy10669        120 ----------NNA---RFDFLSSG-TTC-YSRCLDYARFRQICDETDSIMFADMSHISGLIA  166 (337)
Q Consensus       120 ----------~~a---~pklII~~-~S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~  166 (337)
                                +.+   ++++|++. .++ .+...|+++|.++|+++|+++++|.+|..++..
T Consensus       133 ~vd~~d~e~l~~ai~~~tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD~t~a~~~~~  194 (431)
T PRK08248        133 FVDPSDPENFEAAITDKTKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVDNTFASPYLL  194 (431)
T ss_pred             EECCCCHHHHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEeCCCCccccC
Confidence                      101   26788775 333 358899999999999999999999999876543

>PRK12462 phosphoserine aminotransferase; Provisional

Probab=98.29  E-value=0.0003  Score=68.78  Aligned_cols=252  Identities=14%  Similarity=0.064  Sum_probs=147.3

Q ss_pred             ccceeeeccCCCCCHHHHHHHhhhhhhccCCCC-CCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeec--CCCc
Q psy10669         30 INGIELIASENFTSLAVLECLGSCLQNKYSEGL-PGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQP--YSGS  106 (337)
Q Consensus        30 ~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~-~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~--~Sgt  106 (337)
                      .+..|..|-=-.+|++|++++...+.+....|. .-.-.+++-++ .++-..+++.++++|+.+.. |  .|.|  .|||
T Consensus         3 ~~~~nF~aGPa~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F-~~i~~~~~~~Lr~Ll~~P~~-y--~Vlfl~GggT   78 (364)
T PRK12462          3 RNQLNFSGGPGALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWF-SSLLAQAEADLRDLLGIPDE-Y--GVVFLQGGSS   78 (364)
T ss_pred             cccceecCCCcCCCHHHHHHHHHHHhcccccCccccccccccHHH-HHHHHHHHHHHHHHhCCCCC-C--eEEEEeccHH
Confidence            456788888888999999999988776543332 22333444333 44555677899999998432 2  3444  3447


Q ss_pred             hhHHHHHHhhCCc------------------ccc-c-----------------------------ccEEEEc--Cccccc
Q psy10669        107 PANFAVCEKALPT------------------NNA-R-----------------------------FDFLSSG--TTCYSR  136 (337)
Q Consensus       107 ~AN~~v~~aLl~~------------------~~a-~-----------------------------pklII~~--~S~~~~  136 (337)
                      .+.-++..-|+.+                  +.+ +                             .+.|.++  +++.+.
T Consensus        79 ~~~ea~~~Nll~~g~~~~~~~~tG~fg~r~~~ea~~~g~v~~~~~~~~~~~~~~p~~~~~~~~~d~~~v~~t~NETstGv  158 (364)
T PRK12462         79 LQFSMIPMNFSRPGAAAPEYVTTGYWSRKAIGEASRVAAMRVVWDGAASGYRTLPSLAELDWDARAPFRHYVSNETVEGL  158 (364)
T ss_pred             HHHHHHHHHcCCCCCcEEEEEeCCHHHHHHHHHHHhcCCceEecCcCCCCCCcCCCHHHhccCCCCcEEEEccCCCCceE
Confidence            7888888888753                  001 0                             1222111  333333


Q ss_pred             ccChHHHHHHhhhcCCeEEEeccccccccc------eeeeec------cCC-chhh-h-hHHHHHhhccCCC--------
Q psy10669        137 CLDYARFRQICDETDSIMFADMSHISGLIA------GVKGVT------KTG-EKIL-Y-DYEEKINNAVFPS--------  193 (337)
Q Consensus       137 ~~d~~~l~eia~~~ga~l~vD~AH~~Gli~------g~~~T~------~~G-g~i~-~-~l~~~i~~~~~p~--------  193 (337)
                      ..|     ++.+..+++++||++=.+|-..      ++..++      |-| ++++ . ++.++.++. .|.        
T Consensus       159 ~~~-----~~~~~~~~llvvD~sS~~~s~pid~~~~dvi~agsQKnlgP~Gltvvivs~~al~~~~~~-~p~~ldy~~~~  232 (364)
T PRK12462        159 QFP-----DAAGLPDSPLIADMSSDFMSRPFDVEAYGMVYAHAQKNLGPAGVTVAIIRRALLERVPDT-LPPMLDFRTHV  232 (364)
T ss_pred             ecC-----cccccCCCeEEEEcCchhhCCCCChHHccEEEeeccccCCCCceEEEEECHHHHhhcccc-CCchhhHHHHH
Confidence            332     3444468999999996665554      344443      334 2222 2 333322211 111        


Q ss_pred             ----CCCCCcHHHHHHHHHHHHHHhch--hhHHHHHHHHHHHHHHHHHHHhCC-CEEec--CCCCCeEEE-EEecCCCcc
Q psy10669        194 ----LQGGPHNHAIGAIATAMLQAQSD--EFKSYQAQVKANASHLSDEMIKRG-YHVVT--GGTDVHLIL-IDLRKNKLT  263 (337)
Q Consensus       194 ----~~g~~~~~~iaala~a~~e~~~~--~~~~y~~~v~~na~~l~~~L~~~G-~~v~~--~~t~~h~v~-V~~~~~~~~  263 (337)
                          +.-||....|-++..+++++++.  ..+...++-.+.++.+++.+.+.. |-...  ...-+.+.+ ..+.+..+ 
T Consensus       233 ~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~~~~~~~~~RS~mnv~f~~~~~~l-  311 (364)
T PRK12462        233 EHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVIDCHAHRAARSTMNVAFRFRQPRL-  311 (364)
T ss_pred             hcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcCcceEEEEcCCHHH-
Confidence                23489999999999999999865  557888888999999999998854 44332  122233332 23343332 


Q ss_pred             hHHHHHHHhhcCceeccCc----ccchhh-hhHh
Q psy10669        264 GSKVELVLEEIAIACNKNT----GISLAA-EIQA  292 (337)
Q Consensus       264 ~~~~~~~L~~~gI~v~~~~----girig~-~~~t  292 (337)
                      -.+.-+.+++.|+.--+-.    |+|++. ++++
T Consensus       312 ~~~f~~~a~~~gl~~lkGhr~vgg~Ras~yna~~  345 (364)
T PRK12462        312 DTLFKEQSTEAGFCGLSGHRSIGGIRASLYNAVS  345 (364)
T ss_pred             HHHHHHHHHHCCCccccCCcccCceEEEcCCCCC
Confidence            2333444556688764322    888865 5555

>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated

Probab=98.28  E-value=8.9e-06  Score=79.96  Aligned_cols=154  Identities=14%  Similarity=0.052  Sum_probs=98.4

Q ss_pred             ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669         70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------  119 (337)
Q Consensus        70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------  119 (337)
                      |+...+.+|    +++++++|.++     ++.+.||+.|..+++. ++++                              
T Consensus        48 ~~p~~~~Le----~~la~l~g~~~-----al~~~SG~~Al~~~l~-~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~  117 (380)
T PRK06176         48 GNPTRFALE----ELIADLEGGVK-----GFAFASGLAGIHAVFS-LFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCT  117 (380)
T ss_pred             CChhHHHHH----HHHHHHhCCCC-----EEEECCHHHHHHHHHH-HcCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEE
Confidence            455677888    58899999886     6889999988777664 5443                              


Q ss_pred             ----------ccc---cccEEEEc-Ccc-cccccChHHHHHHhhhcCCeEEEeccccccccc-----e----eeeecc--
Q psy10669        120 ----------NNA---RFDFLSSG-TTC-YSRCLDYARFRQICDETDSIMFADMSHISGLIA-----G----VKGVTK--  173 (337)
Q Consensus       120 ----------~~a---~pklII~~-~S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----g----~~~T~~--  173 (337)
                                +.+   ++++|++. +++ .+...|+++|.++|+++|+++++|.+|..++..     |    +.|.+|  
T Consensus       118 ~vd~~d~e~l~~ai~~~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD~t~a~~~~~~p~~~gaDivv~S~tK~l  197 (380)
T PRK06176        118 IIDTSDLSQIKKAIKPNTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFATPYYQNPLLLGADIVVHSGTKYL  197 (380)
T ss_pred             EcCCCCHHHHHHhcCcCceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEECCccccccCCccccCCCEEEecCceec
Confidence                      111   26887775 443 357889999999999999999999999987654     1    222222  


Q ss_pred             ------CCchhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC
Q psy10669        174 ------TGEKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR  239 (337)
Q Consensus       174 ------~Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~  239 (337)
                            .||+++.   ++.+++....  ...|....+.-+.+.  ...+  .....+.++..+|++.+++.|.+.
T Consensus       198 ~g~~d~~gG~vv~~~~~~~~~~~~~~--~~~G~~~~~~~~~l~--~~gl--~tl~~R~~~~~~~a~~la~~L~~~  266 (380)
T PRK06176        198 GGHSDVVAGLVTTNNEALAQEIAFFQ--NAIGGVLGPQDSWLL--QRGI--KTLGLRMEAHQKNALCVAEFLEKH  266 (380)
T ss_pred             cCCccceeeEEEecHHHHHHHHHHHH--HHhcCCCCHHHHHHH--Hhcc--CcHHHHHHHHHHHHHHHHHHHHhC
Confidence                  2676654   3444443211  111222222222211  1111  234677888889999999999884

>TIGR03372 putres_am_tran putrescine aminotransferase

Probab=98.28  E-value=8e-05  Score=74.69  Aligned_cols=157  Identities=19%  Similarity=0.218  Sum_probs=92.5

Q ss_pred             cEEEEcCcccccc---cC----hHHHHHHhhhcCCeEEEeccccccc--cc--------ee----eeecc--CCch----
Q psy10669        125 DFLSSGTTCYSRC---LD----YARFRQICDETDSIMFADMSHISGL--IA--------GV----KGVTK--TGEK----  177 (337)
Q Consensus       125 klII~~~S~~~~~---~d----~~~l~eia~~~ga~l~vD~AH~~Gl--i~--------g~----~~T~~--~Gg~----  177 (337)
                      ..||+. +.+++.   .+    +++++++|+++|+++|+|+.|+ |+  .+        |+    ...+|  .||+    
T Consensus       226 AavIvE-pv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~t-G~GRtG~~~a~e~~gv~PDivt~gK~lg~G~~Pig  303 (442)
T TIGR03372       226 AAIILE-PIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQT-GMGRTGKMFACEHEGVQPDILCLAKALGGGVMPIG  303 (442)
T ss_pred             EEEEEe-CccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeeccc-CCCccccchhhhhcCCCCCeeeehhhhcCCcccce
Confidence            455654 466544   34    5678899999999999999994 42  22        11    11122  1342    


Q ss_pred             --hhh-hHHHHHhhccCCCC-CCCC--cHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCE-Eec-CC
Q psy10669        178 --ILY-DYEEKINNAVFPSL-QGGP--HNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYH-VVT-GG  247 (337)
Q Consensus       178 --i~~-~l~~~i~~~~~p~~-~g~~--~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~-v~~-~~  247 (337)
                        +.. ++.+.+...  |+. .+|.  |+...|+..+++..+.+   +...+++.+..++|.+.|++.  .+. .+. --
T Consensus       304 avv~~~~i~~~~~~~--~~~~~~T~~gnp~~~Aaa~a~L~~i~~---~~l~~~~~~~G~~l~~~L~~l~~~~~~~i~~vR  378 (442)
T TIGR03372       304 ATIATEAVFSVLFDN--PFLHTTTFGGNPLACAAALATINELLE---KNLPAQAAIKGDFLLDGFQQLAAEYPDLIIEAR  378 (442)
T ss_pred             EEEecHHHHHhhhcc--CccccCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHHhCCCceEEEe
Confidence              333 455544211  222 2333  66667666666766643   246677888888888888763  222 111 11


Q ss_pred             CCCeEEEEEecCCCcchHHHHHHHhhcCceeccC----cccchhhh
Q psy10669        248 TDVHLILIDLRKNKLTGSKVELVLEEIAIACNKN----TGISLAAE  289 (337)
Q Consensus       248 t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~----~girig~~  289 (337)
                      ....++.|.+.+.. ....+.+.|.+.||.+...    ..+||.-+
T Consensus       379 G~Gl~~giel~~~~-~~~~i~~~l~~~Gvl~~~~~~~~~~lr~~Pp  423 (442)
T TIGR03372       379 GKGLLMAIEFRDNE-IGYAFAKELFQQNILVAGTLNNAKSIRIEPP  423 (442)
T ss_pred             cceEEEEEEeCChH-HHHHHHHHHHHCCcEEeecCCCCCEEEEECC
Confidence            35677778876543 4456777777789999753    25666433

Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.

>KOG2862|consensus

Probab=98.26  E-value=0.00014  Score=68.38  Aligned_cols=240  Identities=13%  Similarity=0.043  Sum_probs=152.8

Q ss_pred             eeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHH
Q psy10669         34 ELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVC  113 (337)
Q Consensus        34 ~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~  113 (337)
                      .|.|--.-+|+.|++|+...     ..|+...-+       -+|-....+-++..|....++  --+.+.||+.+.-+.+
T Consensus        20 L~gPGPsnl~~~V~~A~~~~-----~lgh~sPe~-------~qIm~~v~egikyVFkT~n~~--tf~isgsGh~g~E~al   85 (385)
T KOG2862|consen   20 LLGPGPSNLSGRVQEAMSRP-----SLGHMSPEF-------VQIMDEVLEGIKYVFKTANAQ--TFVISGSGHSGWEAAL   85 (385)
T ss_pred             eecCCCcCCCHHHHHhhcCC-----ccccCCHHH-------HHHHHHHHHHHHHHhccCCCc--eEEEecCCcchHHHHH
Confidence            57777777899999998632     234433322       233333345667788766531  1277788888766655


Q ss_pred             HhhCCc---------------------------------------------ccc--cccEEEEc--CcccccccC-hHHH
Q psy10669        114 EKALPT---------------------------------------------NNA--RFDFLSSG--TTCYSRCLD-YARF  143 (337)
Q Consensus       114 ~aLl~~---------------------------------------------~~a--~pklII~~--~S~~~~~~d-~~~l  143 (337)
                      .-++.|                                             +++  +|++|.+.  +|+-+...| .+.+
T Consensus        86 ~N~lePgd~vLv~~~G~wg~ra~D~~~r~ga~V~~v~~~~G~~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~~~~~~  165 (385)
T KOG2862|consen   86 VNLLEPGDNVLVVSTGTWGQRAADCARRYGAEVDVVEADIGQAVPLEEITEKLSQHKPKAVFVTHGDSSTGVLQDLLAIS  165 (385)
T ss_pred             HhhcCCCCeEEEEEechHHHHHHHHHHhhCceeeEEecCcccCccHHHHHHHHHhcCCceEEEEecCccccccchHHHHH
Confidence            655544                                             112  38887775  677788888 5567


Q ss_pred             HHHhhhcCCeEEEeccccccccc------ee--eeec-------cCC-chhhh-h-------------------HHHHHh
Q psy10669        144 RQICDETDSIMFADMSHISGLIA------GV--KGVT-------KTG-EKILY-D-------------------YEEKIN  187 (337)
Q Consensus       144 ~eia~~~ga~l~vD~AH~~Gli~------g~--~~T~-------~~G-g~i~~-~-------------------l~~~i~  187 (337)
                      .++|++++++|+||.--+.|=..      |+  .-|+       |.| ++|.. +                   +....+
T Consensus       166 g~lc~k~~~lllVD~VaSlggt~F~mDewgVDvaytgSQKaL~aP~GLsiisfS~ka~~~~~~rK~~~~~~yFd~~~~~~  245 (385)
T KOG2862|consen  166 GELCHKHEALLLVDTVASLGGTEFEMDEWGVDVAYTGSQKALGAPAGLSIISFSDKALEAIRDRKTKPVSFYFDILRLGN  245 (385)
T ss_pred             HHHhhcCCeEEEEechhhcCCccceehhhcccEEEecchhhcCCCCCcceeecCHHHHHHHhhccCCceEEEEeHHhhcc
Confidence            79999999999999876666544      21  2222       234 33321 1                   111111


Q ss_pred             hcc---CCCC-CCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCC---CeEEEEEecCC
Q psy10669        188 NAV---FPSL-QGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTD---VHLILIDLRKN  260 (337)
Q Consensus       188 ~~~---~p~~-~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~---~h~v~V~~~~~  260 (337)
                      +--   -|.+ .-||....+-+|-+|+..+.++..++..++-.+++++|...|++.|++......+   +-.-.|. -..
T Consensus       246 ~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~GLq~fv~~e~~rlptvttv~-vp~  324 (385)
T KOG2862|consen  246 FWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEALGLQLFVVDEELRLPTVTTVK-VPY  324 (385)
T ss_pred             hhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceecChhhccCcceeee-cCC
Confidence            100   0111 3588889999999999999877778899999999999999999999987752111   1111222 245


Q ss_pred             CcchHHHHHHHhh-cCceeccCc------ccchhh
Q psy10669        261 KLTGSKVELVLEE-IAIACNKNT------GISLAA  288 (337)
Q Consensus       261 ~~~~~~~~~~L~~-~gI~v~~~~------girig~  288 (337)
                      ++|..++...+.. +++.+.--.      -+|||+
T Consensus       325 gvDw~dVv~~~~~~~~vei~gglg~~~gKv~RIGl  359 (385)
T KOG2862|consen  325 GVDWKDVVAYAMSHYVVEIGGGLGPTVGKVFRIGL  359 (385)
T ss_pred             CCCHHHHHHHHHHhcCEEeccccCCCcccEEEEEE
Confidence            7788888888776 466654322      789984

>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]

Probab=98.25  E-value=3.1e-05  Score=76.10  Aligned_cols=192  Identities=14%  Similarity=0.081  Sum_probs=126.5

Q ss_pred             ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669         70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------  119 (337)
Q Consensus        70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------  119 (337)
                      |+...+.+|    +++++|=|.+.     .+.|.||..|...++.+++++                              
T Consensus        61 ~nPT~~~lE----~~~a~LEg~~~-----~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~  131 (396)
T COG0626          61 GNPTRDALE----EALAELEGGED-----AFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVT  131 (396)
T ss_pred             CCccHHHHH----HHHHHhhCCCc-----EEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeEEE
Confidence            577788899    47788888886     699999999988888999874                              


Q ss_pred             -----------ccc---cccEEEEc-Cccc-ccccChHHHHHHhhhcCCeEEEeccccccccc-----e----eeeecc-
Q psy10669        120 -----------NNA---RFDFLSSG-TTCY-SRCLDYARFRQICDETDSIMFADMSHISGLIA-----G----VKGVTK-  173 (337)
Q Consensus       120 -----------~~a---~pklII~~-~S~~-~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----g----~~~T~~-  173 (337)
                                 +..   ++|+|.+. +|+- ....|+++|.++|+++|++++||-+-..++.-     |    +.|.+| 
T Consensus       132 ~~d~~~~~~~~~~~~~~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTfatP~~q~PL~~GaDIVvhSaTKy  211 (396)
T COG0626         132 FVDPGDDEALEAAIKEPNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNTFATPVLQRPLELGADIVVHSATKY  211 (396)
T ss_pred             EECCCChHHHHHHhcccCceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEEECCcccccccChhhcCCCEEEEecccc
Confidence                       111   37888887 5552 38899999999999999999999999998886     2    334433 


Q ss_pred             -------CCchhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-CCCE
Q psy10669        174 -------TGEKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-RGYH  242 (337)
Q Consensus       174 -------~Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~G~~  242 (337)
                             -||.+++   .+.+.+....+ ...|+...|-=|-+  .++-+  ....-++++..+||..+++.|.+ +.++
T Consensus       212 l~GHsDvl~G~v~~~~~~~~~~~~~~~~-~~~G~~l~p~dA~l--~lRGl--kTL~~Rm~~~~~nA~~IA~~L~~~p~V~  286 (396)
T COG0626         212 LGGHSDVLGGVVLTPNEELYELLFFAQR-ANTGAVLSPFDAWL--LLRGL--RTLALRMERHNENALKIAEFLADHPKVK  286 (396)
T ss_pred             ccCCcceeeeEEecChHHHHHHHHHHHH-hhcCCCCCHHHHHH--HHhcc--chHHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence                   2676664   35554422222 11333333433322  22333  34678899999999999999998 3443


Q ss_pred             -EecCC---------------CCCeEEEEEecCCCcchHHHHHHHhhcCceec
Q psy10669        243 -VVTGG---------------TDVHLILIDLRKNKLTGSKVELVLEEIAIACN  279 (337)
Q Consensus       243 -v~~~~---------------t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~  279 (337)
                       |+.++               .-.-++.+.+..   . ..+.+.++..-+..-
T Consensus       287 ~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~---~-~~~~~f~~~L~l~~~  335 (396)
T COG0626         287 KVYYPGLPSHPGHELAKRQMTGYGGLFSFELKN---E-EAAKKFLDSLKLFKL  335 (396)
T ss_pred             EEECCCCCCCCcHHHHHHhcCCCceEEEEEeCC---h-HHHHHHHHhCCccEE
Confidence             33322               123344444432   2 566777776555544

>PRK14809 histidinol-phosphate aminotransferase; Provisional

Probab=98.25  E-value=0.00023  Score=68.93  Aligned_cols=222  Identities=13%  Similarity=0.125  Sum_probs=125.5

Q ss_pred             ccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCc-
Q psy10669         30 INGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGS-  106 (337)
Q Consensus        30 ~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt-  106 (337)
                      ..-|+|...+|..  +|.+.+++...+..  ..+||..    |   ..+    .|+.++++++.+.    -+|..++|+ 
T Consensus        30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~--~~~Y~~~----~---~~~----lr~~ia~~~~~~~----~~I~it~G~~   92 (357)
T PRK14809         30 DDLVKLSSNENPHGPSPAAVEAIREAAER--VHSYPKA----S---HAD----LTAALADRWDVSP----EQVWLANGGD   92 (357)
T ss_pred             cceeEecCCCCCCCCCHHHHHHHHHHHhh--hhcCCCC----C---HHH----HHHHHHHHhCCCc----ceEEECCCHH
Confidence            4568888777765  88888888765332  1223211    1   122    3457788888876    368888884 


Q ss_pred             hhHHHHHHhhCCc-----------------------------------------ccc----cccEEEEcCccc--ccccC
Q psy10669        107 PANFAVCEKALPT-----------------------------------------NNA----RFDFLSSGTTCY--SRCLD  139 (337)
Q Consensus       107 ~AN~~v~~aLl~~-----------------------------------------~~a----~pklII~~~S~~--~~~~d  139 (337)
                      ++...++.+++++                                         .+.    ++|+|++..-++  +...+
T Consensus        93 ~al~~~~~~~~~~gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~k~i~l~~p~NPTG~~~s  172 (357)
T PRK14809         93 GALDYLARAMLDPGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAYDGERIVYLTSPHNPTGSEIP  172 (357)
T ss_pred             HHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhhcCCcEEEEeCCCCCCCcCCC
Confidence            6766666777653                                         001    267777763344  48888


Q ss_pred             hHHHHHHhhhc--CCeEEEeccccc----c----ccc-----eeeeec-c----CC---chhhh--hHHHHHhhccCCCC
Q psy10669        140 YARFRQICDET--DSIMFADMSHIS----G----LIA-----GVKGVT-K----TG---EKILY--DYEEKINNAVFPSL  194 (337)
Q Consensus       140 ~~~l~eia~~~--ga~l~vD~AH~~----G----li~-----g~~~T~-~----~G---g~i~~--~l~~~i~~~~~p~~  194 (337)
                      .+++.+|++..  +.++++|+++.-    +    .+.     .+.+|. |    .|   |++++  ++.+++.....|. 
T Consensus       173 ~~~~~~l~~~~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~~~~~~~~-  251 (357)
T PRK14809        173 LDEVEALAERTDEETLVVVDEAYGEFAERPSAVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVPEEWADAYARVNTPF-  251 (357)
T ss_pred             HHHHHHHHHhCccCcEEEEechhhhccCCchhHHHHhhCCCEEEEecchhHhcCcchhheeeecCHHHHHHHHHhCCCC-
Confidence            88888877654  789999999752    1    111     122332 2    13   66655  5666666543222 


Q ss_pred             CCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhc
Q psy10669        195 QGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEI  274 (337)
Q Consensus       195 ~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~  274 (337)
                        +++.....+...++..  ....++.++...++-+++.+.|.+.++   .  .....+++.+.    +..++.+.|.+.
T Consensus       252 --~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~---~--~~g~f~~~~~~----~~~~~~~~l~~~  318 (357)
T PRK14809        252 --AASELACRAGLAALDD--DEHVERTVETARWAREYIREELDAPTW---E--SAGNFVLAEVG----DASAVAEAAQER  318 (357)
T ss_pred             --CCCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHhcCccC---C--CCCCEEEEECC----CHHHHHHHHHHC
Confidence              2333333333333321  112234444555555556666654332   2  23345567663    356777888888


Q ss_pred             CceeccCc
Q psy10669        275 AIACNKNT  282 (337)
Q Consensus       275 gI~v~~~~  282 (337)
                      ||.+.+-.
T Consensus       319 gv~v~~g~  326 (357)
T PRK14809        319 GVIVRDCT  326 (357)
T ss_pred             CEEEEECc
Confidence            99998744

>PLN00144 acetylornithine transaminase

Probab=98.25  E-value=0.00016  Score=71.07  Aligned_cols=159  Identities=15%  Similarity=0.164  Sum_probs=90.1

Q ss_pred             ccEEEEcCc-----ccccccC-hHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeecc--CCchh----
Q psy10669        124 FDFLSSGTT-----CYSRCLD-YARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTK--TGEKI----  178 (337)
Q Consensus       124 pklII~~~S-----~~~~~~d-~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~--~Gg~i----  178 (337)
                      ++.||+.+.     .++.+.+ +++|+++|+++|++||+|+.|+ .|-.+        +    +.+..|  .||+-    
T Consensus       168 ~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~PDi~t~sK~l~~G~pig~v  247 (382)
T PLN00144        168 TAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEPDIMTLAKPLAGGLPIGAV  247 (382)
T ss_pred             eEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCCCCCEEEecccccCCcceEEE
Confidence            577887743     2232222 5679999999999999999986 22211        1    111122  12322    


Q ss_pred             -hh-hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh--CCCEEec--CCCCCeE
Q psy10669        179 -LY-DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK--RGYHVVT--GGTDVHL  252 (337)
Q Consensus       179 -~~-~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~--~G~~v~~--~~t~~h~  252 (337)
                       .. ++.+.+........+ +.++...++..+.+..+.+   .++.+++.+..++|.+.|.+  ..+..+.  .+ ...+
T Consensus       248 ~~~~~~~~~~~~~~~~~T~-~~~pl~~aaa~a~l~~i~~---~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~vrg-~G~~  322 (382)
T PLN00144        248 LVTEKVASAINPGDHGSTF-AGGPLVCNAALAVLDKISK---PGFLASVAKKGEYLRELLRRKLGGNPHVKEVRG-VGLL  322 (382)
T ss_pred             EEcHHHHhccCCCCCCCCC-CCCHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHHHHHHHHHhhCCCceeeec-CceE
Confidence             22 465555543333334 3445555555555666543   35667777777777776665  1222111  11 4456


Q ss_pred             EEEEecCCCcchHHHHHHHhhcCceeccC---cccchhhhh
Q psy10669        253 ILIDLRKNKLTGSKVELVLEEIAIACNKN---TGISLAAEI  290 (337)
Q Consensus       253 v~V~~~~~~~~~~~~~~~L~~~gI~v~~~---~girig~~~  290 (337)
                      +++.+.   .....+...+.+.||.+.+.   ..|||.-+.
T Consensus       323 ~~l~l~---~~~~~~~~~~~~~Gv~i~~~~~~~~lrl~p~~  360 (382)
T PLN00144        323 VGIQLD---VPAGPLVDACRDSGLLVLTAGKGDVVRLVPPL  360 (382)
T ss_pred             EEEEec---CccHHHHHHHHHCCeEEeecCCCCEEEEeCCC
Confidence            667662   23466777778889998753   377776554

>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal)

Probab=98.24  E-value=0.0001  Score=72.29  Aligned_cols=175  Identities=17%  Similarity=0.145  Sum_probs=108.1

Q ss_pred             ccchHHHHHHHHHHHHHhhcCCCCCCC----cceeecCCCchhHHHHHHhh---------------CCc-----------
Q psy10669         70 GNQFIDEIEIVAQQRSLKAFNLDPEQW----GCNVQPYSGSPANFAVCEKA---------------LPT-----------  119 (337)
Q Consensus        70 G~~~~~~lE~~~~~~~a~lfg~~~~~~----~~~v~~~Sgt~AN~~v~~aL---------------l~~-----------  119 (337)
                      .+....++|..+.+-++++||.+.+..    +..+..++||.+|+..+.+-               .++           
T Consensus        73 ~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~  152 (373)
T PF00282_consen   73 ASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHY  152 (373)
T ss_dssp             TSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-T
T ss_pred             cccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhccccccccccccccccccc
Confidence            345567899999999999999983211    13455566689997665443               011           


Q ss_pred             -----------------------------c------ccc---ccEEEEc--CcccccccChHHHHHHhhhcCCeEEEecc
Q psy10669        120 -----------------------------N------NAR---FDFLSSG--TTCYSRCLDYARFRQICDETDSIMFADMS  159 (337)
Q Consensus       120 -----------------------------~------~a~---pklII~~--~S~~~~~~d~~~l~eia~~~ga~l~vD~A  159 (337)
                                                   +      .++   |-+||++  .+..+..-|+++|.+||++++++|.||+|
T Consensus       153 S~~Kaa~~lGlg~~~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlHVDaA  232 (373)
T PF00282_consen  153 SIEKAARILGLGVRKIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLHVDAA  232 (373)
T ss_dssp             HHHHHHHHTTSEEEEE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEEEEET
T ss_pred             HHHHhcceeeeEEEEecCCcchhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccccceeeeeccc
Confidence                                         0      011   4345554  44457889999999999999999999999


Q ss_pred             ccccccc---------e------e-eeeccC------Cchhhh-h---HHHHH--h-hccC--------------CCCCC
Q psy10669        160 HISGLIA---------G------V-KGVTKT------GEKILY-D---YEEKI--N-NAVF--------------PSLQG  196 (337)
Q Consensus       160 H~~Gli~---------g------~-~~T~~~------Gg~i~~-~---l~~~i--~-~~~~--------------p~~~g  196 (337)
                      ++...+.         |      + ...||-      .|+++. +   +....  + ..++              +++++
T Consensus       233 ~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~tl~~  312 (373)
T PF00282_consen  233 YGGSALLSPEYRHLLFGIERADSITIDPHKWLGVPYGCGVLLVRDKSDLRDAFSINADYLGNDDRESDESYDYGDYTLQG  312 (373)
T ss_dssp             TGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-SSS-EEEEESSGGGHHGGGEEEETCTT-S-SSS-GGGCEEEGSSSS
T ss_pred             ccccccccccccccccccccccccccchhhhhcCCccceeEEeecccchHHHhccChhhhcccccccccccccccccccc
Confidence            8764433         1      1 122321      233332 1   32211  1 0011              22344


Q ss_pred             CCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEec
Q psy10669        197 GPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVT  245 (337)
Q Consensus       197 ~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~  245 (337)
                      += -...+.+-..++..-...|.++.++.++++++|++.|++. +|+++.
T Consensus       313 SR-~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~  361 (373)
T PF00282_consen  313 SR-RFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVN  361 (373)
T ss_dssp             SG-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESS
T ss_pred             cc-cchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEc
Confidence            43 3344555566666666788999999999999999999995 588875

Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....

>KOG1383|consensus

Probab=98.23  E-value=0.00014  Score=71.57  Aligned_cols=155  Identities=17%  Similarity=0.250  Sum_probs=109.5

Q ss_pred             ccEEEEcCccc--ccccChHHHHHHhhh-cCCeEEEeccccccccc--e-------------ee----eecc-----CC-
Q psy10669        124 FDFLSSGTTCY--SRCLDYARFRQICDE-TDSIMFADMSHISGLIA--G-------------VK----GVTK-----TG-  175 (337)
Q Consensus       124 pklII~~~S~~--~~~~d~~~l~eia~~-~ga~l~vD~AH~~Gli~--g-------------~~----~T~~-----~G-  175 (337)
                      +..+|....++  +...|+++|.++.-+ ++..+.||++ .-|+|.  +             ++    .+||     +| 
T Consensus       219 ti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~-~GgFi~p~~~~~~~~fdFr~p~V~Sisa~~HKYGl~~~G~  297 (491)
T KOG1383|consen  219 TIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDAC-LGGFINPAGYLNEEEFDFRVPGVTSISADGHKYGLAPAGS  297 (491)
T ss_pred             eEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeeccc-CccccccccccCccccccCCCCceeEeeccceeeeeecCc
Confidence            46666654444  578899999998877 9999999999 444444  1             22    2332     34 


Q ss_pred             chhhh---hH-HH----HHhh--c--cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-CCCE
Q psy10669        176 EKILY---DY-EE----KINN--A--VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-RGYH  242 (337)
Q Consensus       176 g~i~~---~l-~~----~i~~--~--~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~G~~  242 (337)
                      +.+++   ++ .+    .++.  +  .-|++-|+=....+|+.-+++..+-+.+|.+..++++++++.|++++++ .|++
T Consensus       298 ~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~  377 (491)
T KOG1383|consen  298 SWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAALMSLGEEGYRENTQNIVETARKLREGIENIKGIK  377 (491)
T ss_pred             EEEEEcccccccceEEEeccccCccccCcccccCCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccccce
Confidence            44443   22 11    1111  1  1244445555577888888888888889999999999999999999999 6899


Q ss_pred             EecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCc
Q psy10669        243 VVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT  282 (337)
Q Consensus       243 v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~  282 (337)
                      +++   .+-+-++..++...+-.++++.|.+.|..+|.=+
T Consensus       378 i~g---kp~vs~~~~~s~~~~i~elsd~l~~~GW~lnalq  414 (491)
T KOG1383|consen  378 IVG---KPLVSFILFGSNDVNIFELSDLLRKKGWILNALQ  414 (491)
T ss_pred             ecC---CCcEEEEEccCCccchhhhhHHHHhcCcCccccC
Confidence            986   3445556667788899999999999999988533

>PRK08175 aminotransferase; Validated

Probab=98.21  E-value=0.00067  Score=66.67  Aligned_cols=155  Identities=10%  Similarity=0.085  Sum_probs=90.4

Q ss_pred             ccEEEEc-Ccc-cccccChH---HHHHHhhhcCCeEEEeccccccccc-----------------eeeeec-c-------
Q psy10669        124 FDFLSSG-TTC-YSRCLDYA---RFRQICDETDSIMFADMSHISGLIA-----------------GVKGVT-K-------  173 (337)
Q Consensus       124 pklII~~-~S~-~~~~~d~~---~l~eia~~~ga~l~vD~AH~~Gli~-----------------g~~~T~-~-------  173 (337)
                      +++|++. +.+ .+...|.+   +|.++|+++|+++++|+++.--...                 .++++. |       
T Consensus       165 ~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGl  244 (395)
T PRK08175        165 PKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGW  244 (395)
T ss_pred             ceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcch
Confidence            6777765 333 35777885   5667889999999999998531111                 012222 2       


Q ss_pred             CCchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCe
Q psy10669        174 TGEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVH  251 (337)
Q Consensus       174 ~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h  251 (337)
                      +.|+++.  ++.+.+.... .....+.+.+...+...++..- +...+..++.+.++.+++.+.|.+.|+.+.. ....-
T Consensus       245 RiG~~~~~~~l~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~-p~~g~  321 (395)
T PRK08175        245 RIGFMVGNPELVSALARIK-SYHDYGTFTPLQVAAIAALEGD-QQCVRDIAEQYKRRRDVLVKGLHEAGWMVEM-PKASM  321 (395)
T ss_pred             hheeeeCCHHHHHHHHHHH-hhcccCCCcHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHcCCcccC-CCEEE
Confidence            2366655  5666555331 1111122223333333334321 2234566777888889999999998887653 23455


Q ss_pred             EEEEEecCC--CcchHHHHH-HHhhcCceeccC
Q psy10669        252 LILIDLRKN--KLTGSKVEL-VLEEIAIACNKN  281 (337)
Q Consensus       252 ~v~V~~~~~--~~~~~~~~~-~L~~~gI~v~~~  281 (337)
                      .+++++...  ..+..++.. .+++.||.+.+-
T Consensus       322 ~i~i~l~~~~~~~~~~~~~~~l~~~~gv~v~p~  354 (395)
T PRK08175        322 YVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSPG  354 (395)
T ss_pred             EEEEECCcccCCCCHHHHHHHHHHhCCEEEeCc
Confidence            677887653  123556655 456789999874

>PRK05166 histidinol-phosphate aminotransferase; Provisional

Probab=98.20  E-value=0.00029  Score=68.69  Aligned_cols=224  Identities=16%  Similarity=0.123  Sum_probs=129.9

Q ss_pred             cceeeeccCCC--CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCc-h
Q psy10669         31 NGIELIASENF--TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGS-P  107 (337)
Q Consensus        31 ~~i~l~asen~--~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt-~  107 (337)
                      +-|.|-..+|-  .++.+.+++... ... ...|+      -... +++    ++.+++++|++.    .+|.+++|+ +
T Consensus        37 ~~i~l~~~~~~~~~~~~~~~al~~~-~~~-~~~Y~------~~~g-~~l----r~~ia~~~~~~~----~~i~~t~G~~~   99 (371)
T PRK05166         37 RIAKLGSNENPLGPSPAVRRAFADI-AEL-LRLYP------DPQG-RAL----REAIAARTGVPA----DRIILGNGSED   99 (371)
T ss_pred             ceEEcCCCCCCCCCCHHHHHHHHHH-HHH-hhcCC------CCcH-HHH----HHHHHHHhCcCH----HHEEEcCCHHH
Confidence            44666666664  488888888653 211 11121      1111 123    457788899875    368899995 5


Q ss_pred             hHHHHHHhhCCc---------------------------------------cc--c---cccEEEEc-Ccc-cccccChH
Q psy10669        108 ANFAVCEKALPT---------------------------------------NN--A---RFDFLSSG-TTC-YSRCLDYA  141 (337)
Q Consensus       108 AN~~v~~aLl~~---------------------------------------~~--a---~pklII~~-~S~-~~~~~d~~  141 (337)
                      +...++.+++++                                       .+  +   ++|+|++. +++ .+...|.+
T Consensus       100 ~l~~~~~~~~~~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~  179 (371)
T PRK05166        100 LIAVICRAVLRPGDRVVTLYPSFPLHEDYPTMMGARVERVTVTPDLGFDLDALCAAVARAPRMLMFSNPSNPVGSWLTAD  179 (371)
T ss_pred             HHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHH
Confidence            655556777653                                       00  1   26877765 333 35888888


Q ss_pred             HHHHHhhh--cCCeEEEeccccccc-----------cc------eeeeec-c-------CCchhh-h--hHHHHHhhccC
Q psy10669        142 RFRQICDE--TDSIMFADMSHISGL-----------IA------GVKGVT-K-------TGEKIL-Y--DYEEKINNAVF  191 (337)
Q Consensus       142 ~l~eia~~--~ga~l~vD~AH~~Gl-----------i~------g~~~T~-~-------~Gg~i~-~--~l~~~i~~~~~  191 (337)
                      ++.+|++.  .+.++++|+++.-=.           +.      .+.+|. |       +-|+++ .  ++.+.+.....
T Consensus       180 ~~~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~~~l~~~~~~~~~  259 (371)
T PRK05166        180 QLARVLDATPPETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSDPELVGLLDRVRT  259 (371)
T ss_pred             HHHHHHHhCCCCcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCCHHHHHHHHHhcc
Confidence            88877654  378999999974210           10      122232 2       226644 2  46665554322


Q ss_pred             CCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHH
Q psy10669        192 PSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVL  271 (337)
Q Consensus       192 p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L  271 (337)
                      +  . +.+.....+...++..  ....++.++...++-+.+.+.|.+.|+.+..  .+...+++++..   +..++.+.|
T Consensus       260 ~--~-~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~p--~~g~fl~~~~~~---~~~~l~~~l  329 (371)
T PRK05166        260 P--F-NVNGAAQAAALAALDD--EEHLAKGVALALAERERLKKELAEMGYRIAP--SRANFLFFDARR---PASAVAEAL  329 (371)
T ss_pred             C--C-CCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCcCeeCC--CcCCEEEEeCCC---CHHHHHHHH
Confidence            2  2 2333333333333321  1234556677778888899999999988654  333445777542   456777888


Q ss_pred             hhcCceeccC
Q psy10669        272 EEIAIACNKN  281 (337)
Q Consensus       272 ~~~gI~v~~~  281 (337)
                      .+.||.+.+-
T Consensus       330 ~~~gi~v~p~  339 (371)
T PRK05166        330 LRQGVIVKPW  339 (371)
T ss_pred             HHCCeEEecC
Confidence            8889998763

>PRK08363 alanine aminotransferase; Validated

Probab=98.20  E-value=0.0006  Score=67.05  Aligned_cols=237  Identities=15%  Similarity=0.131  Sum_probs=126.5

Q ss_pred             cceeeeccC----CC-CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcC--CCCCCCcceeecC
Q psy10669         31 NGIELIASE----NF-TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFN--LDPEQWGCNVQPY  103 (337)
Q Consensus        31 ~~i~l~ase----n~-~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg--~~~~~~~~~v~~~  103 (337)
                      .-|+|-..+    ++ .++.+.+++...+.+.       ...|+...-..++.+...+...+.+|  .+.    -+|.++
T Consensus        31 ~~i~l~~g~p~~~~~~p~~~~~~~~~~~~~~~-------~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~----~~i~it   99 (398)
T PRK08363         31 KVIRLNIGDPVKFDFQPPEHMKEAYCRAIKEG-------HNYYGPSEGLPELREAIVKREKRKNGVDITP----DDVRVT   99 (398)
T ss_pred             CeEEEeCCCCCcCCCCCCHHHHHHHHHHHHcC-------CCCCCCCCCcHHHHHHHHHHHHHhcCCCCCh----hhEEEe
Confidence            346666444    34 4888888887654321       01222222233444222223333334  333    257788


Q ss_pred             CC-chhHHHHHHhhCCc--------------------------------------------ccc--cccEEEEc-Ccc-c
Q psy10669        104 SG-SPANFAVCEKALPT--------------------------------------------NNA--RFDFLSSG-TTC-Y  134 (337)
Q Consensus       104 Sg-t~AN~~v~~aLl~~--------------------------------------------~~a--~pklII~~-~S~-~  134 (337)
                      +| ++|+..++.+++++                                            +..  ++++|++. +.+ .
T Consensus       100 ~G~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPt  179 (398)
T PRK08363        100 AAVTEALQLIFGALLDPGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKITEKTKAIAVINPNNPT  179 (398)
T ss_pred             CCHHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHHHhhCCcceEEEEEECCCCCC
Confidence            88 67887778888654                                            000  25666664 322 3


Q ss_pred             ccccC---hHHHHHHhhhcCCeEEEeccccccccc---------------eeeeec-cC----C---chhhh----hHHH
Q psy10669        135 SRCLD---YARFRQICDETDSIMFADMSHISGLIA---------------GVKGVT-KT----G---EKILY----DYEE  184 (337)
Q Consensus       135 ~~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~---------------g~~~T~-~~----G---g~i~~----~l~~  184 (337)
                      +...+   +++|.++|+++|+++++|+++.--...               .+..|. |.    |   |+++.    ++.+
T Consensus       180 G~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~  259 (398)
T PRK08363        180 GALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSLTKDVPVIVMNGLSKVYFATGWRLGYIYFVDPEGKLA  259 (398)
T ss_pred             CcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHHHcCcCCcEEEEecchhccCCccceEEEEEEeCcHHHHH
Confidence            45666   666778899999999999997531111               012222 21    2   55542    2333


Q ss_pred             HHhhccCCC--CCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCC-
Q psy10669        185 KINNAVFPS--LQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKN-  260 (337)
Q Consensus       185 ~i~~~~~p~--~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~-  260 (337)
                      .+.......  ..-+++.+...+...++.+. ....++.++++.++.+.+.+.|.+. |+.+.. ...+...++.+... 
T Consensus       260 ~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~~-~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~-p~g~~~~~~~l~~~~  337 (398)
T PRK08363        260 EVREAIDKLARIRLCPNTPAQFAAIAGLTGP-MDYLEEYMKKLKERRDYIYKRLNEIPGISTTK-PQGAFYIFPRIEEGP  337 (398)
T ss_pred             HHHHHHHHHhcccccCChHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHhcCCCCEecC-CCeEEEEEEEeccCC
Confidence            333221100  00123334444444444321 2234567788888999999999885 777643 23344555556542 


Q ss_pred             -CcchHHHHHHHhhcCceecc
Q psy10669        261 -KLTGSKVELVLEEIAIACNK  280 (337)
Q Consensus       261 -~~~~~~~~~~L~~~gI~v~~  280 (337)
                       .-+...+.+.|.++||.+.+
T Consensus       338 ~~~~~~~~~~~l~~~gV~v~~  358 (398)
T PRK08363        338 WKDDKEFVLDVLHEAHVLFVH  358 (398)
T ss_pred             CCCHHHHHHHHHHhCCEEEeC
Confidence             11334456777889999875

>PRK04260 acetylornithine aminotransferase; Provisional

Probab=98.19  E-value=0.00016  Score=70.52  Aligned_cols=141  Identities=15%  Similarity=0.123  Sum_probs=84.7

Q ss_pred             hHHHHHHhhhcCCeEEEeccccccccc-e---------e---eeec-c------CCchhhh--hHHHHHhhccCCCCCCC
Q psy10669        140 YARFRQICDETDSIMFADMSHISGLIA-G---------V---KGVT-K------TGEKILY--DYEEKINNAVFPSLQGG  197 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~~Gli~-g---------~---~~T~-~------~Gg~i~~--~l~~~i~~~~~p~~~g~  197 (337)
                      ++++.++|+++|+++++|++|. |+-. |         +   ..|. |      ..|.++.  ++.+.+........+ +
T Consensus       188 l~~~~~l~~~~~~~~i~De~~~-g~g~~g~~~~~~~~~~~pdi~t~sK~l~~G~~ig~~~~~~~~~~~~~~~~~~~t~-~  265 (375)
T PRK04260        188 VKALADYCQETGILLIVDEVQT-GMGRTGKLYAFEHYGIEPDIFTLAKGLANGVPVGAMLAKSSLGGAFGYGSHGSTF-G  265 (375)
T ss_pred             HHHHHHHHHHcCCEEEEechhh-CCCcccchhhhHhhCCCCCEEEecccccCCcceEEEEEcHHHHhhcCCCCCCCCC-C
Confidence            6789999999999999999995 5421 1         0   1122 2      1133332  455555443222223 3


Q ss_pred             CcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC----C-CEEecCCCCCeEEEEEecCCCcchHHHHHHHh
Q psy10669        198 PHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR----G-YHVVTGGTDVHLILIDLRKNKLTGSKVELVLE  272 (337)
Q Consensus       198 ~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~----G-~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~  272 (337)
                      .++...++....+..+.   ..++.+++.++.+.+++.|.+.    + +..+.  .....+.+.+..   +..++.+.|.
T Consensus       266 ~~~~~~~aa~a~l~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~g~~~~~~~~~---~~~~~~~~l~  337 (375)
T PRK04260        266 GNKLSMAAASATLDIML---TAGFLEQALENGNYLQEQLQKALQDKETVTTVR--GLGYMIGIETTA---DLSQLVEAAR  337 (375)
T ss_pred             cCHHHHHHHHHHHHHHH---hhHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEe--ccceEEEEEecC---cHHHHHHHHH
Confidence            34455555555555543   2467788889999988888763    2 11111  134456666632   4667888888


Q ss_pred             hcCceeccCc--ccchhhhh
Q psy10669        273 EIAIACNKNT--GISLAAEI  290 (337)
Q Consensus       273 ~~gI~v~~~~--girig~~~  290 (337)
                      +.||.+.+..  .|||..+.
T Consensus       338 ~~Gi~v~~~~~~~lR~~~~~  357 (375)
T PRK04260        338 DKGLIVLTAGTNVIRLLPPL  357 (375)
T ss_pred             hCCCEEecCCCCEEEEcCCC
Confidence            8999986432  68887643

>PRK07366 succinyldiaminopimelate transaminase; Validated

Probab=98.19  E-value=0.0013  Score=64.45  Aligned_cols=242  Identities=12%  Similarity=0.112  Sum_probs=129.7

Q ss_pred             hcccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcC--CCCCCCcceeecC
Q psy10669         28 RQINGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFN--LDPEQWGCNVQPY  103 (337)
Q Consensus        28 rq~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg--~~~~~~~~~v~~~  103 (337)
                      .....|+|-..++..  ++.+.+++...+......+|+.   ..|.   .++-+...+.+.+-+|  .+.+   .+|..+
T Consensus        28 ~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~---~~lr~aia~~~~~~~g~~~~~~---~~I~it   98 (388)
T PRK07366         28 AGKELIDLSLGSSDLPAPAHALEAIAQSLHDPSTHGYLL---FHGT---LDFREAAAQWYEQRFGLAVDPE---TEVLPL   98 (388)
T ss_pred             cCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCcccCCCCC---CCCC---HHHHHHHHHHHHHhhCCcCCCc---CeEEEC
Confidence            344567777777654  7888888876543210111111   1222   2232111123333334  3331   148888


Q ss_pred             CCc-hhHHHHHHhhCCc-----------------------------------------cc-----ccccEEEEcCccc--
Q psy10669        104 SGS-PANFAVCEKALPT-----------------------------------------NN-----ARFDFLSSGTTCY--  134 (337)
Q Consensus       104 Sgt-~AN~~v~~aLl~~-----------------------------------------~~-----a~pklII~~~S~~--  134 (337)
                      +|+ +|...++.+++++                                         ++     .++|+|++..-.+  
T Consensus        99 ~Gs~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~p~NPT  178 (388)
T PRK07366         99 IGSQEGTAHLPLAVLNPGDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVLAQARLMVLSYPHNPT  178 (388)
T ss_pred             CCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhcccceEEEEeCCCCCC
Confidence            885 6776667777654                                         00     1267777753344  


Q ss_pred             ccccChHHHH---HHhhhcCCeEEEecccc----ccc------cc--------eeeeec-c-------CCchhhh--hHH
Q psy10669        135 SRCLDYARFR---QICDETDSIMFADMSHI----SGL------IA--------GVKGVT-K-------TGEKILY--DYE  183 (337)
Q Consensus       135 ~~~~d~~~l~---eia~~~ga~l~vD~AH~----~Gl------i~--------g~~~T~-~-------~Gg~i~~--~l~  183 (337)
                      +...+.+++.   ++|+++|++|++|+++.    .|-      ..        .+.+|. |       +-|+++.  ++.
T Consensus       179 G~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~li  258 (388)
T PRK07366        179 TAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIGNAQLI  258 (388)
T ss_pred             CccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcchhheehcCCHHHH
Confidence            4666666655   57889999999999864    121      11        112332 2       2366665  466


Q ss_pred             HHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCC-Cc
Q psy10669        184 EKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKN-KL  262 (337)
Q Consensus       184 ~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~-~~  262 (337)
                      +.+.....+...+++.... .+...++.+- ....++.++.+.++-+.+.+.|.+.|+.+.. ...+.-+++++... +.
T Consensus       259 ~~l~~~~~~~~~~~~~~~~-~~a~~~l~~~-~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~-p~~g~f~~~~~~~~~~~  335 (388)
T PRK07366        259 QALRQVKAVVDFNQYRGIL-NGAIAALTGP-QATVQQTVQIFRQRRDAFINALHQIGWPVPL-PEATMYVWAKLPEPWQG  335 (388)
T ss_pred             HHHHHHHhhcccCCCHHHH-HHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHCCCcccC-CCeeEEEEEECCcccCC
Confidence            6555432222222222122 2222233211 2234667788888888899999988886543 23455667877642 11


Q ss_pred             chHHHHH-HHhhcCceeccC
Q psy10669        263 TGSKVEL-VLEEIAIACNKN  281 (337)
Q Consensus       263 ~~~~~~~-~L~~~gI~v~~~  281 (337)
                      +..++.. .+++.||.+.+-
T Consensus       336 ~~~~~~~~l~~~~gv~v~pg  355 (388)
T PRK07366        336 NSVEFCTQLVAQTGVAASPG  355 (388)
T ss_pred             CHHHHHHHHHHhCCEEEeCc
Confidence            3455544 457789998863

>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=98.18  E-value=1.6e-05  Score=79.41  Aligned_cols=143  Identities=14%  Similarity=0.188  Sum_probs=92.8

Q ss_pred             hHHHHHHhhhcCCeEEEeccccccccc--e---------e----eeecc--CCchh-hh------hHHHHHhhc-----c
Q psy10669        140 YARFRQICDETDSIMFADMSHISGLIA--G---------V----KGVTK--TGEKI-LY------DYEEKINNA-----V  190 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~~Gli~--g---------~----~~T~~--~Gg~i-~~------~l~~~i~~~-----~  190 (337)
                      +++++++|+++|++||+|+.| .|+ +  |         +    ...+|  .||++ ++      ++.+.+.+.     .
T Consensus       230 l~~l~~lc~~~g~llI~DEv~-tG~-GrtG~~~a~~~~gv~PDiv~~gK~l~gG~~p~~a~~~~~~i~~~~~~~~~~~~~  307 (429)
T PRK06173        230 LVKARELCDQYGVLLIFDEIA-TGF-GRTGKLFALEHAGVVPDIMCIGKALTGGYLTLSATITTEAIAQTICSGEAKCFM  307 (429)
T ss_pred             HHHHHHHHHHcCCeEEecchh-cCC-CcCCcchHHHhcCCCCCEEEeehhhhCCccccceEEecHHHHHHHhcCCCCccc
Confidence            446889999999999999999 774 4  1         1    11123  26765 22      344444321     1


Q ss_pred             CCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEec-CCCCCeEEEEEecCCCcchHHHH
Q psy10669        191 FPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVT-GGTDVHLILIDLRKNKLTGSKVE  268 (337)
Q Consensus       191 ~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~-~~t~~h~v~V~~~~~~~~~~~~~  268 (337)
                      +..++ +.|+...|+...+++.+.+ +  ...+++.++.++|.+.|++. +++.+. --...+++.|.++... ....+.
T Consensus       308 ~~~T~-~g~p~~~aaa~a~l~~i~~-~--~~~~~~~~~g~~l~~~L~~~~~~~~v~~vRg~Gl~~~iel~~~~-~~~~i~  382 (429)
T PRK06173        308 HGPTF-MANPLACAIAAESIRLLLE-S--PWQQNIQRIEAQLKQELAPAAEFDSVAEVRVLGAIGVVEMKEPV-NMATLQ  382 (429)
T ss_pred             cCCCC-CcCHHHHHHHHHHHHHHHh-C--CHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEeCCcc-cHHHHH
Confidence            11222 3567777777777766643 2  45889999999999999864 555442 1146888889887643 456778


Q ss_pred             HHHhhcCceeccC-cccchhhh
Q psy10669        269 LVLEEIAIACNKN-TGISLAAE  289 (337)
Q Consensus       269 ~~L~~~gI~v~~~-~girig~~  289 (337)
                      +.|.+.||.+... ..|||.-|
T Consensus       383 ~~l~e~Gi~v~~~g~~l~~~Pp  404 (429)
T PRK06173        383 PRFVEHGIWVRPFGKLVYIMPP  404 (429)
T ss_pred             HHHHHCCeEEEecCCEEEEeCC
Confidence            8888889999764 26666544

>PRK12403 putative aminotransferase; Provisional

Probab=98.18  E-value=7.2e-05  Score=75.39  Aligned_cols=108  Identities=16%  Similarity=0.170  Sum_probs=64.4

Q ss_pred             EEEEcCcccccc---cC----hHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeecc--CCc------h
Q psy10669        126 FLSSGTTCYSRC---LD----YARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTK--TGE------K  177 (337)
Q Consensus       126 lII~~~S~~~~~---~d----~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~--~Gg------~  177 (337)
                      .||+. .++++.   .+    ++.|+++|+++|++||+|+.|+ .|=.+        |    +...+|  .||      +
T Consensus       225 avI~E-pv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~e~~gv~PDiv~~gK~lggG~~Piga~  303 (460)
T PRK12403        225 GFVAE-PFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWFAHEHFGFEPDTLSIAKGLTSGYVPMGGL  303 (460)
T ss_pred             EEEEc-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhhhhhcCCCCCeEEEcccccccccceEEE
Confidence            45554 466544   34    6678899999999999999994 33233        1    111122  234      3


Q ss_pred             hhh-hHHHHHhhc--c--CCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHH-HHHHHHHHHHHh
Q psy10669        178 ILY-DYEEKINNA--V--FPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVK-ANASHLSDEMIK  238 (337)
Q Consensus       178 i~~-~l~~~i~~~--~--~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~-~na~~l~~~L~~  238 (337)
                      +.. ++.+.+...  .  +..++ +.|+...|+..+++..+.+   +...+++. ++.++|.+.|++
T Consensus       304 v~~~~i~~~~~~~~~~~~~~~T~-~gnPl~~Aaala~L~~i~~---~~l~~~~~~~~g~~l~~~L~~  366 (460)
T PRK12403        304 VLSKRIAEALVEQGGVFAHGLTY-SGHPVAAAVAIANLKALRD---EGVVTRVKDDTGPYLQRCLRE  366 (460)
T ss_pred             EECHHHHHHHhcCCCccccCCCC-CCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHH
Confidence            333 455554321  1  12223 3566666666666666532   24678886 889999998875

>PRK06959 putative threonine-phosphate decarboxylase; Provisional

Probab=98.18  E-value=0.00019  Score=69.37  Aligned_cols=191  Identities=15%  Similarity=0.130  Sum_probs=117.8

Q ss_pred             HHHHHhhcCCCCCCCcceeecCCCch-hHHHHHHhhCCc---------------------------c-----cc-cc-cE
Q psy10669         82 QQRSLKAFNLDPEQWGCNVQPYSGSP-ANFAVCEKALPT---------------------------N-----NA-RF-DF  126 (337)
Q Consensus        82 ~~~~a~lfg~~~~~~~~~v~~~Sgt~-AN~~v~~aLl~~---------------------------~-----~a-~p-kl  126 (337)
                      ++.+++.+|...+   -+|..++|++ +... +..++++                           .     .. +. .+
T Consensus        59 ~~~ia~~~~~~~~---~~I~i~~Gs~e~i~~-l~~~~~~g~v~v~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~~~~v  134 (339)
T PRK06959         59 AACAARYYGAPDA---AHVLPVAGSQAAIRA-LPALLPRGRVGIAPLAYSEYAPAFARHGHRVVPLDEAADTLPAALTHL  134 (339)
T ss_pred             HHHHHHHhCCCCc---ccEEECcCHHHHHHH-HHHhcCCCeEEEcCCCcHHHHHHHHHCCCEEEeecccchhccccCCEE
Confidence            4678899999643   2588889964 5433 3445543                           0     00 12 45


Q ss_pred             EEEcCcc-cccccChHHHHHHh---hhcCCeEEEecccccccc-----c-------eeeeec-c----CC---chhhh--
Q psy10669        127 LSSGTTC-YSRCLDYARFRQIC---DETDSIMFADMSHISGLI-----A-------GVKGVT-K----TG---EKILY--  180 (337)
Q Consensus       127 II~~~S~-~~~~~d~~~l~eia---~~~ga~l~vD~AH~~Gli-----~-------g~~~T~-~----~G---g~i~~--  180 (337)
                      +++++++ -+...+.+++.+++   .+++.++++|+++.--..     .       .+..|. |    .|   |++++  
T Consensus       135 ~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~~s~~~~~~~~~vi~l~SfSK~~gl~GlRiGy~v~~~  214 (339)
T PRK06959        135 IVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPAASLAAHTDRPGLVVLRSVGKFFGLAGVRAGFVLAAP  214 (339)
T ss_pred             EEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCcccchhccCCCCEEEEecChhhcCCcchheEEEecCH
Confidence            6666644 25888888888764   467999999999763211     0       123333 2    13   77766  


Q ss_pred             hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCC
Q psy10669        181 DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKN  260 (337)
Q Consensus       181 ~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~  260 (337)
                      ++.+.+.....|..   .+.+..++...++..  ....++.++++.++-+++.+.|.+.|+++..   ..-.+++++.  
T Consensus       215 ~li~~l~~~~~~~~---vs~~~q~a~~~~L~~--~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~---~~~f~~~~~~--  284 (339)
T PRK06959        215 ALLAALRDALGAWT---VSGPARHAVRAAFAD--AAWQAAMRERLAADGARLAALLRAHGFAVHA---TPLFSWTDDP--  284 (339)
T ss_pred             HHHHHHHHhcCCCC---CcHHHHHHHHHHhCc--HHHHHHHHHHHHHHHHHHHHHHHHCCCCccC---cceEEEEeCC--
Confidence            57777776544432   233444444444432  1223566788888899999999999988753   2334456543  


Q ss_pred             CcchHHHHHHHhhcCceeccCc---ccchhh
Q psy10669        261 KLTGSKVELVLEEIAIACNKNT---GISLAA  288 (337)
Q Consensus       261 ~~~~~~~~~~L~~~gI~v~~~~---girig~  288 (337)
                        +..++.+.|.+.||.++...   .|||+.
T Consensus       285 --~~~~l~~~l~~~GI~vr~~~~~~~lRisi  313 (339)
T PRK06959        285 --RAAALHAALARRGIWTRYFAPPPSVRFGL  313 (339)
T ss_pred             --CHHHHHHHHHhCCeEEEECCCCCeEEEEC
Confidence              45678888888899997532   688863

>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]

Probab=98.18  E-value=0.00037  Score=68.77  Aligned_cols=198  Identities=16%  Similarity=0.138  Sum_probs=116.2

Q ss_pred             CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeec-CCCchhHHHHHHhh---CC
Q psy10669         43 SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQP-YSGSPANFAVCEKA---LP  118 (337)
Q Consensus        43 ~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~-~Sgt~AN~~v~~aL---l~  118 (337)
                      +|.|.+|+...+.+-.+.|.|.           ++|..+-+.+.+.+..-+     -|+| +|||.|++.++---   .+
T Consensus        71 ~p~V~~Av~~~l~~G~~fg~Pt-----------e~Ei~~Aell~~~~p~~e-----~vrfvnSGTEAtmsAiRlARa~Tg  134 (432)
T COG0001          71 HPAVVEAVQEQLERGLSFGAPT-----------ELEVELAELLIERVPSIE-----KVRFVNSGTEATMSAIRLARAYTG  134 (432)
T ss_pred             CHHHHHHHHHHHHhcCCCCCCC-----------HHHHHHHHHHHHhcCccc-----EEEEecchhHHHHHHHHHHHHhhC
Confidence            8999999988766543333332           345444578888888732     2666 78899988765432   11


Q ss_pred             c-------------------------------------------------------ccc--c----ccEEEEc--Ccccc
Q psy10669        119 T-------------------------------------------------------NNA--R----FDFLSSG--TTCYS  135 (337)
Q Consensus       119 ~-------------------------------------------------------~~a--~----pklII~~--~S~~~  135 (337)
                      +                                                       +.+  +    -..||+.  .++.+
T Consensus       135 R~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yND~~al~~~~~~~g~~IAaVIvEPv~gn~g  214 (432)
T COG0001         135 RDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYNDLEALEEAFEEYGDDIAAVIVEPVAGNMG  214 (432)
T ss_pred             CCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecCCCHHHHHHHHHHcCCcEEEEEeccccCCCC
Confidence            0                                                       101  1    2467776  34555


Q ss_pred             cccChH----HHHHHhhhcCCeEEEecccccccc--ce------e---eee-cc--CCchhhh------hHHHHHhhc--
Q psy10669        136 RCLDYA----RFRQICDETDSIMFADMSHISGLI--AG------V---KGV-TK--TGEKILY------DYEEKINNA--  189 (337)
Q Consensus       136 ~~~d~~----~l~eia~~~ga~l~vD~AH~~Gli--~g------~---~~T-~~--~Gg~i~~------~l~~~i~~~--  189 (337)
                      +..|-+    .|++||+++|++||.|+-++.=-+  +|      +   .+| +|  -||+=++      ++.+.+.+.  
T Consensus       215 ~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~~gi~PDlttlGKiIGGGlP~ga~gGr~eiM~~~~p~g~  294 (432)
T COG0001         215 VVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQGYYGVEPDLTTLGKIIGGGLPIGAFGGRAEIMEQLAPLGP  294 (432)
T ss_pred             CCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCcccccccCcCcchhhhhhhhcCCcceeeeccHHHHHhhhCCCCC
Confidence            555544    588999999999999999763111  11      1   112 23  2444332      566655544  


Q ss_pred             cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh----CCCEEecCCCCCeEEEEEecC
Q psy10669        190 VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK----RGYHVVTGGTDVHLILIDLRK  259 (337)
Q Consensus       190 ~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~----~G~~v~~~~t~~h~v~V~~~~  259 (337)
                      +|..-+=+-|+..++|-.+++.++.+.+  ...+++.+.++.|++.|++    .|+++... .-..++.|-+..
T Consensus       295 vyqaGT~sgnplamaAG~atl~~l~~~~--~~y~~l~~~~~~L~~gl~~~~~~~g~~~~v~-~~gsm~~i~F~~  365 (432)
T COG0001         295 VYQAGTLSGNPLAMAAGLATLEELMTEE--GVYERLDALGERLAEGLRAAAERHGIPLTVN-RVGSMFGIFFTE  365 (432)
T ss_pred             ccccCCCCCcHHHHHHHHHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHHHHhCCCeEEe-eecceEEEEecC
Confidence            2322233457778888888888886421  2456666777777776665    67776532 122345555554

>PRK09148 aminotransferase; Validated

Probab=98.17  E-value=0.00079  Score=66.51  Aligned_cols=162  Identities=11%  Similarity=0.042  Sum_probs=91.3

Q ss_pred             ccEEEEc-Ccc-cccccChHH---HHHHhhhcCCeEEEeccccccc--------cc---------eeeeec-c-------
Q psy10669        124 FDFLSSG-TTC-YSRCLDYAR---FRQICDETDSIMFADMSHISGL--------IA---------GVKGVT-K-------  173 (337)
Q Consensus       124 pklII~~-~S~-~~~~~d~~~---l~eia~~~ga~l~vD~AH~~Gl--------i~---------g~~~T~-~-------  173 (337)
                      +++|++. +.+ .+...+.++   |.++|+++|+++++|+++.--.        +.         .+..|. |       
T Consensus       166 ~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGl  245 (405)
T PRK09148        166 PIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGW  245 (405)
T ss_pred             ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcch
Confidence            5666665 333 346777654   5577899999999999975211        10         012232 2       


Q ss_pred             CCchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCe
Q psy10669        174 TGEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVH  251 (337)
Q Consensus       174 ~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h  251 (337)
                      +-|+++.  ++.+.+..... .+..+++.+...++...+..- ....+..++++.++.+.+.+.|.+.|+.+..+ ..+-
T Consensus       246 R~G~~v~~~~~i~~l~~~~~-~~~~~~~~~~q~~~~~~L~~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p-~~g~  322 (405)
T PRK09148        246 RMGFAVGNERLIAALTRVKS-YLDYGAFTPIQVAATAALNGP-QDCIAEMRELYKKRRDVLVESFGRAGWDIPPP-AASM  322 (405)
T ss_pred             heeeeeCCHHHHHHHHHHHH-HhccCCChHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHcCCccCCC-CeeE
Confidence            2267765  56665554321 111122333333333333221 12335667788888899999999988875432 3344


Q ss_pred             EEEEEecCC--CcchHHHHHH-HhhcCceeccCc--------ccchhh
Q psy10669        252 LILIDLRKN--KLTGSKVELV-LEEIAIACNKNT--------GISLAA  288 (337)
Q Consensus       252 ~v~V~~~~~--~~~~~~~~~~-L~~~gI~v~~~~--------girig~  288 (337)
                      -+++.+...  ..+..++... |++.||.+.+-.        .+||+.
T Consensus       323 f~~~~l~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~  370 (405)
T PRK09148        323 FAWAPIPEAFRHLGSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIAL  370 (405)
T ss_pred             EEEEECCCccCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEe
Confidence            567776532  1233455554 557899988632        477764

>PLN02414 glycine dehydrogenase (decarboxylating)

Probab=98.17  E-value=0.00021  Score=77.83  Aligned_cols=156  Identities=14%  Similarity=0.211  Sum_probs=102.8

Q ss_pred             CcccccccChHHHHHHhhhcCCeEEEeccccccccc-------e---eeeecc-----CC------chhhh--hHHHHHh
Q psy10669        131 TTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA-------G---VKGVTK-----TG------EKILY--DYEEKIN  187 (337)
Q Consensus       131 ~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-------g---~~~T~~-----~G------g~i~~--~l~~~i~  187 (337)
                      ++.++...|+++|.++|+++|++++| +||..|+..       |   ++++++     .|      ||+.+  ++..++-
T Consensus       243 P~~~G~v~dv~~I~~~ah~~GaL~iV-aad~lal~~l~~pge~GADi~vgsgqKwg~P~G~GGP~aGflavr~~~~r~~P  321 (993)
T PLN02414        243 PATDGEVLDYAEFVKNAHANGVKVVM-ATDLLALTMLKPPGEWGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRLMP  321 (993)
T ss_pred             CCCCeEEcCHHHHHHHHHHcCCEEEE-EECHHHhcCCCCHhhccCcEEEECCCccccCCCCCCCCeeEEEECHHHHhhCC
Confidence            45578889999999999999999999 888877766       1   344442     22      66643  3433211


Q ss_pred             h---------ccCCCC--------------CCCCcHHHHHHHHHHHHHH-----hchhhHHHHHHHHHHHHHHHHHHHhC
Q psy10669        188 N---------AVFPSL--------------QGGPHNHAIGAIATAMLQA-----QSDEFKSYQAQVKANASHLSDEMIKR  239 (337)
Q Consensus       188 ~---------~~~p~~--------------~g~~~~~~iaala~a~~e~-----~~~~~~~y~~~v~~na~~l~~~L~~~  239 (337)
                      .         .-.|..              .+|.|.....++.+++.-+     .....++.++++..++.+|+++|.+.
T Consensus       322 griVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~  401 (993)
T PLN02414        322 GRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKL  401 (993)
T ss_pred             CcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhhc
Confidence            0         001111              4678885555555554322     22344677899999999999999999


Q ss_pred             CCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCc--ccchhhhhHh
Q psy10669        240 GYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT--GISLAAEIQA  292 (337)
Q Consensus       240 G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~--girig~~~~t  292 (337)
                      |+++.+. ...+++.+.+.    +..++.++|.+.||.+....  .+|+...+.+
T Consensus       402 G~~~~~~-~~f~~vt~~~~----~~~~v~~~L~~~gI~l~~~~~~~lrvs~~e~~  451 (993)
T PLN02414        402 GFQVQSL-PFFDTVKVKCS----DADAIADAAAKVGINLRVVDANTVTVSFDETT  451 (993)
T ss_pred             CCccCCC-CCcCeEEEecC----CHHHHHHHHHHCCCeeEEecCCeEEEEeeccC
Confidence            9998753 33446666653    34778888998999886543  5777655554

>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]

Probab=98.17  E-value=0.00026  Score=69.20  Aligned_cols=162  Identities=14%  Similarity=0.150  Sum_probs=94.1

Q ss_pred             ccEEEEcC-----cccc-cccChHHHHHHhhhcCCeEEEeccccc-cccc--------e----eeeec-------cCCch
Q psy10669        124 FDFLSSGT-----TCYS-RCLDYARFRQICDETDSIMFADMSHIS-GLIA--------G----VKGVT-------KTGEK  177 (337)
Q Consensus       124 pklII~~~-----S~~~-~~~d~~~l~eia~~~ga~l~vD~AH~~-Gli~--------g----~~~T~-------~~Gg~  177 (337)
                      +..||+.+     .+.+ -..=++.++++|+++|++||+|+=|+- |=-|        |    +..+.       |-|++
T Consensus       185 taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~fA~e~~gV~PDI~tlaK~LgGG~PigA~  264 (404)
T COG4992         185 TAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLFAYEHYGVEPDILTLAKALGGGFPIGAM  264 (404)
T ss_pred             eEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHHHHHHhCCCCCEEEeeccccCCccceee
Confidence            45666642     2222 222345688999999999999999863 2111        1    12222       23333


Q ss_pred             hhh-hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh--CCCEEecC-CCCCeEE
Q psy10669        178 ILY-DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK--RGYHVVTG-GTDVHLI  253 (337)
Q Consensus       178 i~~-~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~--~G~~v~~~-~t~~h~v  253 (337)
                      +.. ++.+.+.+.....++| -|+-+.|+..+++..+.+   +...+++.+...+|.++|.+  ..|.++.. -...-++
T Consensus       265 la~~~~~~~~~~G~HgSTfG-GNpLacAv~~a~l~~l~~---e~ll~~v~~~g~~~~~~L~~l~~~~~~v~~vRG~GLmi  340 (404)
T COG4992         265 LATEEIASAFTPGDHGSTFG-GNPLACAVALAVLEVLLE---EGLLENVREKGEYLLQRLRELKRRYPLVKEVRGRGLMI  340 (404)
T ss_pred             EEchhhhhcCCCCcccCCCC-cCHHHHHHHHHHHHHHcc---hhHHHHHHHHHHHHHHHHHHHhhcCCceeeeecceeEE
Confidence            333 2334444444333343 355566655566666654   35677888888899999988  34443321 1223344


Q ss_pred             EEEecCCCcchHHHHHHHhhcCceeccCc--ccchhhhh
Q psy10669        254 LIDLRKNKLTGSKVELVLEEIAIACNKNT--GISLAAEI  290 (337)
Q Consensus       254 ~V~~~~~~~~~~~~~~~L~~~gI~v~~~~--girig~~~  290 (337)
                      =+.+.... .+..+.+.|.+.|+.++.-.  -||+-=|.
T Consensus       341 Giel~~~~-~a~~~~~~~~~~gvL~~~a~~~ViR~~PpL  378 (404)
T COG4992         341 GIELKEPY-RARDIVRALREEGVLVLPAGPNVIRFLPPL  378 (404)
T ss_pred             EEEecCcc-cHHHHHHHHHHCCeEEecCCCCeEEecCCc
Confidence            45555432 46778888888899988644  77776443

>PRK04781 histidinol-phosphate aminotransferase; Provisional

Probab=98.16  E-value=0.00019  Score=69.90  Aligned_cols=187  Identities=11%  Similarity=0.079  Sum_probs=112.1

Q ss_pred             HHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHhhCCc-----------------------------------------
Q psy10669         82 QQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEKALPT-----------------------------------------  119 (337)
Q Consensus        82 ~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~aLl~~-----------------------------------------  119 (337)
                      |+.+++++|++.    .+|.+++| +++...++.+++.+                                         
T Consensus        65 r~~ia~~~~~~~----~~I~~t~G~~~~l~~~~~~~~~~g~~~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d  140 (364)
T PRK04781         65 RSALAALYGCAP----EQLLIGRGSDEAIDLLVRALCVPGRDAVLVTPPVFGMYAVCARLQNAPLVEVPLVDGADGFHAD  140 (364)
T ss_pred             HHHHHHHhCcCh----HHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCCCccCCCcC
Confidence            457788889876    37989999 56766666777532                                         


Q ss_pred             --cc---c---cccEEEEcCccc--ccccChHHHHHHhhh--cCCeEEEecccc--cc------ccc-----eeeeec-c
Q psy10669        120 --NN---A---RFDFLSSGTTCY--SRCLDYARFRQICDE--TDSIMFADMSHI--SG------LIA-----GVKGVT-K  173 (337)
Q Consensus       120 --~~---a---~pklII~~~S~~--~~~~d~~~l~eia~~--~ga~l~vD~AH~--~G------li~-----g~~~T~-~  173 (337)
                        ++   .   ++++|++..-++  +...|.+++.++++.  .++++++|+++.  ..      ++.     .+..|. |
T Consensus       141 ~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~~f~~~~~~~~~~~~~~~vi~~~SfSK  220 (364)
T PRK04781        141 VPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGEFSDVPSAVGLLARYDNLAVLRTLSK  220 (364)
T ss_pred             HHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcchhhcCCcchHHHHhhCCCEEEEecChh
Confidence              00   0   257777753233  588899888887764  378999999974  11      111     123333 2


Q ss_pred             -------CCchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCE-
Q psy10669        174 -------TGEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYH-  242 (337)
Q Consensus       174 -------~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~-  242 (337)
                             +-|+++.  ++.+.++....|.  + .+.+...+...++..-......+..+++.++-+.+.+.|++. |+. 
T Consensus       221 ~~gl~GlRvGy~v~~~~l~~~l~~~~~~~--~-~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~  297 (364)
T PRK04781        221 AHALAAARIGSLIANAELIAVLRRCQAPY--P-VPTPCAALAEQALSAPALAVTARRVAEVRAERERLHAALAQLPGVRR  297 (364)
T ss_pred             hcccccceeeeeeCCHHHHHHHHhccCCC--C-CCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCCe
Confidence                   1266665  6777777654443  2 222333322222221000123455567778888899999886 764 


Q ss_pred             EecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccC
Q psy10669        243 VVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKN  281 (337)
Q Consensus       243 v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~  281 (337)
                      +..  ++.--+++.+.    +..++.+.|.+.||.+.+.
T Consensus       298 ~~p--~~g~f~~~~~~----~~~~~~~~l~~~gI~v~~~  330 (364)
T PRK04781        298 VYP--SQGNFLLVRFD----DAEAAFQALLAAGVVVRDQ  330 (364)
T ss_pred             ECC--CCCcEEEEEcC----CHHHHHHHHHHCCeEEeeC
Confidence            443  33334667764    3567788888899999764

>COG3844 Kynureninase [Amino acid transport and metabolism]

Probab=98.16  E-value=7.7e-05  Score=70.62  Aligned_cols=240  Identities=15%  Similarity=0.147  Sum_probs=156.8

Q ss_pred             CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHH-HHHhhCCc--
Q psy10669         43 SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFA-VCEKALPT--  119 (337)
Q Consensus        43 ~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~-v~~aLl~~--  119 (337)
                      ++.+.....+.....++++..+++.-.-..+.+-=|.+. .+++-+.|+...    .|..+.++..|+. ++.+.+++  
T Consensus        44 p~~~~a~~~q~a~deW~~~lirsw~~a~~~W~~lp~~lg-dklApLiGA~~~----Evvv~dtts~nl~k~L~aalr~~~  118 (407)
T COG3844          44 PRAVTARLQQVATDEWGEGLIRSWNKAKADWFDLPERLG-DKLAPLIGARAG----EVVVTDTTSINLFKVLAAALRPQE  118 (407)
T ss_pred             chHHHHHHHHHHHHHHHhhhhhhhcccCCchhhchhHHH-HHhhhhhcCCCC----ceEEeCCcchHHHHHHHHHhccCC
Confidence            667777777777788888877777654444444333333 588999999873    4555666666632 33333332  


Q ss_pred             --------------------------------cc---------c-c--ccEEEEcCccc--ccccChHHHHHHhhhcCCe
Q psy10669        120 --------------------------------NN---------A-R--FDFLSSGTTCY--SRCLDYARFRQICDETDSI  153 (337)
Q Consensus       120 --------------------------------~~---------a-~--pklII~~~S~~--~~~~d~~~l~eia~~~ga~  153 (337)
                                                      +.         + .  ..+|.+++-+|  +...|+.+|.++|+++|++
T Consensus       119 ~r~vIv~E~~~fpTdly~a~g~~~~~~~~~~~~~~~~P~~~~~~~~dd~AvV~L~~V~y~TGql~dm~aiT~~AH~~gal  198 (407)
T COG3844         119 GRRVIVSEGDNFPTDLYIAEGLADLLGIGYDLEGVIAPRALEEAITDDVAVVLLSHVNYKTGQLLDMRAITALAHQHGAL  198 (407)
T ss_pred             CceEEeecCCCCCcchhhhcchhhhhcccccceeeeChHHHHHhhccceEEEEeccccccccceeeHHHHHHHHHhcCce
Confidence                                            00         0 0  24666666555  6889999999999999999


Q ss_pred             EEEeccccccccc------e----eeeecc--------CCchhhh-hHHH----------------HHh------hccCC
Q psy10669        154 MFADMSHISGLIA------G----VKGVTK--------TGEKILY-DYEE----------------KIN------NAVFP  192 (337)
Q Consensus       154 l~vD~AH~~Gli~------g----~~~T~~--------~Gg~i~~-~l~~----------------~i~------~~~~p  192 (337)
                      +..|-||++|.++      |    +-+|+|        -+|+.+. +..+                .+.      +.+.-
T Consensus       199 v~wDLAHsaGavp~~Lh~~gaDfaigcsyKYLNgGPGapa~l~v~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~r  278 (407)
T COG3844         199 VGWDLAHSAGAVPVDLHAAGADFAIGCSYKYLNGGPGAPAGLFVAPRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARR  278 (407)
T ss_pred             EEeehhcccCCcceeecccCCCeeeeeeceeccCCCCCceeEEeccccccccccccccccCCCCcchhhhccCcCccccc
Confidence            9999999999998      2    233332        1122221 1111                111      11223


Q ss_pred             CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh----CCCEEecCC----CCCeEEEEEecCCCcch
Q psy10669        193 SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK----RGYHVVTGG----TDVHLILIDLRKNKLTG  264 (337)
Q Consensus       193 ~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~----~G~~v~~~~----t~~h~v~V~~~~~~~~~  264 (337)
                      +.+|++..-.++++-.++.-.-.....+.+++-+..+.+|-+.+..    .++++.+.-    --+|   |++...  .+
T Consensus       279 f~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsq---vS~~hp--~~  353 (407)
T COG3844         279 FLCGTQPVLSLAALEGALDIFADVDITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQ---VSLYHP--HG  353 (407)
T ss_pred             eeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchhhhccce---eeEecC--cH
Confidence            3478999999999888876665556678899999999999887776    378888731    2244   444443  58


Q ss_pred             HHHHHHHhhcCceeccCc--ccchh-hhhHh
Q psy10669        265 SKVELVLEEIAIACNKNT--GISLA-AEIQA  292 (337)
Q Consensus       265 ~~~~~~L~~~gI~v~~~~--girig-~~~~t  292 (337)
                      ..+.+.|.++||...--.  -||+| ||.-+
T Consensus       354 ~~V~qaLi~rGVigD~R~P~vlRfgftPlY~  384 (407)
T COG3844         354 YQVMQALIDRGVIGDFREPDVLRFGFTPLYV  384 (407)
T ss_pred             HHHHHHHHHcCccccccCCCeeeecCcccee
Confidence            889999999999865322  68886 34444

>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic

Probab=98.15  E-value=0.00079  Score=66.24  Aligned_cols=253  Identities=13%  Similarity=0.145  Sum_probs=134.8

Q ss_pred             hhhcHHHHHHHHHHHhh---cccceeeeccCC-----C-CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHH
Q psy10669         12 AQTDPELYSLIKKEKHR---QINGIELIASEN-----F-TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQ   82 (337)
Q Consensus        12 ~~~d~~~~~~~~~e~~r---q~~~i~l~asen-----~-~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~   82 (337)
                      ...|| +.+++...+..   .++.++|-..+.     + .++.+++++...+......+|+-   ..|.   .++    +
T Consensus        11 ~~~~~-~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~g~---~~l----r   79 (401)
T TIGR01264        11 NTVNP-IRAIVDNMKVKPNPEKPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNGYAP---TVGA---LSA----R   79 (401)
T ss_pred             hhhhH-HHHHHHHHHhhhhcCCCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccCCCCCCC---CCCC---HHH----H
Confidence            34455 55555443332   234577665442     2 48889998876544321111110   1122   223    2


Q ss_pred             HHHHhhcC-----CCCCCCcceeecCCC-chhHHHHHHhhCCc-------------------------------------
Q psy10669         83 QRSLKAFN-----LDPEQWGCNVQPYSG-SPANFAVCEKALPT-------------------------------------  119 (337)
Q Consensus        83 ~~~a~lfg-----~~~~~~~~~v~~~Sg-t~AN~~v~~aLl~~-------------------------------------  119 (337)
                      +.++++++     .+.    -+|..++| +++...++.+++++                                     
T Consensus        80 ~aia~~~~~~~~~~~~----~~i~~t~G~~~al~~~~~~l~~~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~  155 (401)
T TIGR01264        80 EAIASYYHNPDGPIEA----DDVVLCSGCSHAIEMCIAALANAGQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWE  155 (401)
T ss_pred             HHHHHHHhhcCCCCCH----HHEEECcChHHHHHHHHHHhCCCCCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCC
Confidence            45556665     333    24777777 67877777888653                                     


Q ss_pred             ------ccc---cccEEEEcCccc--ccccC---hHHHHHHhhhcCCeEEEeccccc----c--ccc----------eee
Q psy10669        120 ------NNA---RFDFLSSGTTCY--SRCLD---YARFRQICDETDSIMFADMSHIS----G--LIA----------GVK  169 (337)
Q Consensus       120 ------~~a---~pklII~~~S~~--~~~~d---~~~l~eia~~~ga~l~vD~AH~~----G--li~----------g~~  169 (337)
                            +.+   ++++|++..-.+  +...+   +++|.++|+++|+++++|++..-    |  ...          .++
T Consensus       156 ~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~  235 (401)
T TIGR01264       156 IDLKQLESLIDEKTAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSC  235 (401)
T ss_pred             CCHHHHHHHhccCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEE
Confidence                  000   156777653343  34544   55677888999999999999752    2  111          112


Q ss_pred             eec-c-------CCchhhh--------hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHH
Q psy10669        170 GVT-K-------TGEKILY--------DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLS  233 (337)
Q Consensus       170 ~T~-~-------~Gg~i~~--------~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~  233 (337)
                      .|. |       +-|+++.        ++.+.+.....+  ..+++.....++...+.+-.+...++.++++.++-+.+.
T Consensus       236 ~SfSK~~~~~GlRiG~iv~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~  313 (401)
T TIGR01264       236 GGLAKRWLVPGWRLGWIIIHDRRGILRDIRDGLVKLSQR--ILGPCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCY  313 (401)
T ss_pred             ccCcccCCCccceEEEEEecCcchhHHHHHHHHHHHhhc--cCCCCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHH
Confidence            332 2       1255543        122333332111  123344455555555543112334667778888888899


Q ss_pred             HHHHhC-CCEEecCCCCCeEEEEEecCC----CcchHHHHHH-HhhcCceeccCc
Q psy10669        234 DEMIKR-GYHVVTGGTDVHLILIDLRKN----KLTGSKVELV-LEEIAIACNKNT  282 (337)
Q Consensus       234 ~~L~~~-G~~v~~~~t~~h~v~V~~~~~----~~~~~~~~~~-L~~~gI~v~~~~  282 (337)
                      +.|.+. |+.+... ...--+++++...    ..+..++.+. +++.||.+.+..
T Consensus       314 ~~L~~~~~~~~~~p-~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gI~v~pg~  367 (401)
T TIGR01264       314 GALAAVPGLRPVMP-SGAMYMMVGIEMEHFPEFKNDVEFTERLVAEQSVFCLPGS  367 (401)
T ss_pred             HHHHhCCCCcccCC-CeeeEEEEEecccccCCCCCHHHHHHHHHHhCCEEEeCch
Confidence            999886 7664322 3455667776531    1234555555 467899987643

This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.

>PLN02656 tyrosine transaminase

Probab=98.14  E-value=0.00042  Score=68.57  Aligned_cols=240  Identities=14%  Similarity=0.047  Sum_probs=130.9

Q ss_pred             hhcccceeeeccCCC------CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhc----C--CCCC
Q psy10669         27 HRQINGIELIASENF------TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAF----N--LDPE   94 (337)
Q Consensus        27 ~rq~~~i~l~asen~------~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lf----g--~~~~   94 (337)
                      ...+.-|+|-..+.-      .++.+++++...+......+|+-   ..|.   .++.    +.+++++    |  .+. 
T Consensus        28 ~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~---~~lr----~~ia~~~~~~~g~~~~~-   96 (409)
T PLN02656         28 ENGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAP---TVGL---PQAR----RAIAEYLSRDLPYKLSL-   96 (409)
T ss_pred             ccCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCC---CCCC---HHHH----HHHHHHHHHhcCCCCCc-
Confidence            345567888777763      37899998876554321112211   1122   2332    2334444    3  233 


Q ss_pred             CCcceeecCCC-chhHHHHHHhhCCc-----------------------------------------cc-----ccccEE
Q psy10669         95 QWGCNVQPYSG-SPANFAVCEKALPT-----------------------------------------NN-----ARFDFL  127 (337)
Q Consensus        95 ~~~~~v~~~Sg-t~AN~~v~~aLl~~-----------------------------------------~~-----a~pklI  127 (337)
                         .+|.+++| ++|...++.+++++                                         .+     .++++|
T Consensus        97 ---~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~v  173 (409)
T PLN02656         97 ---DDVFITSGCTQAIDVALSMLARPGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQNTVAL  173 (409)
T ss_pred             ---ccEEEeCChHHHHHHHHHHHhCCCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhccCceEE
Confidence               25777777 67777777777653                                         00     014544


Q ss_pred             EE-cCccc-cccc---ChHHHHHHhhhcCCeEEEeccccc----cc--cc----------eeeeec-c-------CCchh
Q psy10669        128 SS-GTTCY-SRCL---DYARFRQICDETDSIMFADMSHIS----GL--IA----------GVKGVT-K-------TGEKI  178 (337)
Q Consensus       128 I~-~~S~~-~~~~---d~~~l~eia~~~ga~l~vD~AH~~----Gl--i~----------g~~~T~-~-------~Gg~i  178 (337)
                      ++ .+++- +...   ++++|.++|+++|+++++|+++.-    |-  ..          .+.++. |       +-|++
T Consensus       174 ~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRiG~~  253 (409)
T PLN02656        174 VIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGWRLGWF  253 (409)
T ss_pred             EEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhccCcceeEEEE
Confidence            44 45432 3443   566777889999999999999751    10  11          011222 2       22555


Q ss_pred             hh----------hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC-CEEecCC
Q psy10669        179 LY----------DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG-YHVVTGG  247 (337)
Q Consensus       179 ~~----------~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G-~~v~~~~  247 (337)
                      +.          ++.+++.....+  .++++....++++.++.+-.+..+++.++++.++.+.+.+.|.+.+ +......
T Consensus       254 i~~~~~~~~~~~~~~~~~~~~~~~--~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~~p  331 (409)
T PLN02656        254 VTTDPSGSFRDPKIVERIKKYFDI--LGGPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKEIPCITCPHKP  331 (409)
T ss_pred             EEeCcccccccHHHHHHHHHHHhh--hcCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCcCC
Confidence            43          355555443222  2334555666665655431122356677788888888989988753 3221122


Q ss_pred             CCCeEEEEEecCC---Cc-ch-HHHHHHHhhcCceeccCc
Q psy10669        248 TDVHLILIDLRKN---KL-TG-SKVELVLEEIAIACNKNT  282 (337)
Q Consensus       248 t~~h~v~V~~~~~---~~-~~-~~~~~~L~~~gI~v~~~~  282 (337)
                      ..+.-+++++...   +. +. ..+.+.|.+.||.+.+-.
T Consensus       332 ~gg~~~w~~l~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~  371 (409)
T PLN02656        332 EGSMAVMVKLNLSLLEDISDDIDFCFKLAREESVIILPGT  371 (409)
T ss_pred             CeEEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEecch
Confidence            3345677777421   11 23 345677788899988743

>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase

Probab=98.12  E-value=7e-05  Score=74.77  Aligned_cols=148  Identities=17%  Similarity=0.139  Sum_probs=93.5

Q ss_pred             ccChHHHHHHhhhcCCeEEEeccccccccc--e-------------eeeecc--CCchh-hh------hHHHHHhhcc--
Q psy10669        137 CLDYARFRQICDETDSIMFADMSHISGLIA--G-------------VKGVTK--TGEKI-LY------DYEEKINNAV--  190 (337)
Q Consensus       137 ~~d~~~l~eia~~~ga~l~vD~AH~~Gli~--g-------------~~~T~~--~Gg~i-~~------~l~~~i~~~~--  190 (337)
                      ..++++|+++|+++|++||+|+.| .|+ +  |             +...+|  .||++ ++      ++.+.+++..  
T Consensus       228 ~~~l~~l~~lc~~~~~llI~DEv~-tG~-Gr~G~~~~~~~~~v~pDi~~~gK~l~gG~~p~~a~~~~~~~~~~~~~~~~~  305 (427)
T TIGR00508       228 PTYLKRVQALCKQYDILLIADEIA-TGF-GRTGKLFACEHAGVVPDILCVGKALTGGYMTLSATVTTDKVAQTISSGEAG  305 (427)
T ss_pred             HHHHHHHHHHHHHcCCEEEEeccc-cCC-CcCCccchhhhcCCCCCEEEechhhhcCcccceEEEEcHHHHHHHhcCCCC
Confidence            355667889999999999999999 664 3  1             111223  26754 22      4555555321  


Q ss_pred             ---CCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCE-Eec-CCCCCeEEEEEecCCCcchH
Q psy10669        191 ---FPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYH-VVT-GGTDVHLILIDLRKNKLTGS  265 (337)
Q Consensus       191 ---~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~-v~~-~~t~~h~v~V~~~~~~~~~~  265 (337)
                         +...++ .++..+++...++..+.+   .+..+++.++.++|.+.|++.+.. ... .-....++.|.+.... ...
T Consensus       306 ~~~~~~T~~-g~p~~~aaa~a~l~~l~~---~~~~~~~~~~~~~l~~~L~~l~~~~~i~~vrg~G~~~~i~~~~~~-~~~  380 (427)
T TIGR00508       306 CFMHGPTFM-GNPLACAVAEASLAILLE---GEWQKQVSAIENQLKRELSPLRKNPVVKDVRVLGAIGVVEMYKPV-NVE  380 (427)
T ss_pred             ccccCCCCC-cCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHhhcCCCEEeEeccccEEEEEECCcc-CHH
Confidence               112232 366677776667766543   245799999999999999886432 111 1124677888886543 466


Q ss_pred             HHHHHHhhcCceeccCc-ccchhhhhH
Q psy10669        266 KVELVLEEIAIACNKNT-GISLAAEIQ  291 (337)
Q Consensus       266 ~~~~~L~~~gI~v~~~~-girig~~~~  291 (337)
                      .+.+.|.+.||.+.... .+|+..+..
T Consensus       381 ~~~~~l~~~Gv~~~~~~~~l~~~ppl~  407 (427)
T TIGR00508       381 ELQKKFVEQGVWIRPFGKLIYVMPPYI  407 (427)
T ss_pred             HHHHHHHHCCeEEEecCCEEEEECCCC
Confidence            78888888899997542 566654433

All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.

>PRK05664 threonine-phosphate decarboxylase; Reviewed

Probab=98.10  E-value=0.00029  Score=67.61  Aligned_cols=155  Identities=11%  Similarity=0.056  Sum_probs=93.3

Q ss_pred             cc-EEEEcCcc-cccccChHHHHHH---hhhcCCeEEEecccccccc-----c-------eeeeecc-----CC---chh
Q psy10669        124 FD-FLSSGTTC-YSRCLDYARFRQI---CDETDSIMFADMSHISGLI-----A-------GVKGVTK-----TG---EKI  178 (337)
Q Consensus       124 pk-lII~~~S~-~~~~~d~~~l~ei---a~~~ga~l~vD~AH~~Gli-----~-------g~~~T~~-----~G---g~i  178 (337)
                      +| ++++++++ -+...+.+++.+|   |+++|+++++|++..-..-     .       .+.+|..     .|   |++
T Consensus       125 ~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~~s~~~~~~~~~vi~~~SfSK~~gl~GlRiG~~  204 (330)
T PRK05664        125 LDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNTPQHSLAACAHRPGLIVLRSFGKFFGLAGARLGFV  204 (330)
T ss_pred             CCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccCCCcccccccccCCCEEEEeeccccccCCCcceEEE
Confidence            45 46666754 2477777766654   5788999999999742211     1       1233432     23   777


Q ss_pred             hh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEE
Q psy10669        179 LY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILID  256 (337)
Q Consensus       179 ~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~  256 (337)
                      ++  ++.+.+.....+...   +.+...+...++.+.  ...+..++++.++.+.+.+.|.+.|++..+  +..-.+++.
T Consensus       205 v~~~~l~~~~~~~~~~~~~---~~~~~~~~~~~L~~~--~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~--~~~~f~~~~  277 (330)
T PRK05664        205 LAEPALLRALAELLGPWTV---SGPTRWLAQAALADT--PWQRRQRERLLAASQRLAALLRRHGLTPAG--GCALFQWVR  277 (330)
T ss_pred             EeCHHHHHHHHHhcCCCCC---CHHHHHHHHHHHhCh--HHHHHHHHHHHHHHHHHHHHHHHCCCcccC--CcceEEEEe
Confidence            76  577766655443322   233333444444321  223566788888999999999999876532  222234444


Q ss_pred             ecCCCcchHHHHHHHhhcCceeccCc---ccchhhh
Q psy10669        257 LRKNKLTGSKVELVLEEIAIACNKNT---GISLAAE  289 (337)
Q Consensus       257 ~~~~~~~~~~~~~~L~~~gI~v~~~~---girig~~  289 (337)
                      +.    +..++.+.|.+.||.+....   .|||+..
T Consensus       278 ~~----~~~~~~~~l~~~gi~v~~f~~~~~iRis~~  309 (330)
T PRK05664        278 TE----DAAALHEFLARRGILTRLFEQPASLRFGLP  309 (330)
T ss_pred             cC----CHHHHHHHHHHCCeEEEECCCCCeEEEECC
Confidence            32    56788888999999996422   6777643

>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=98.10  E-value=6.5e-05  Score=75.17  Aligned_cols=151  Identities=11%  Similarity=0.046  Sum_probs=86.1

Q ss_pred             ccEEEEcCcccccccChH-------HHHHHhhhcCCeEEEeccccccc-cc--------ee----eeecc--CCc----h
Q psy10669        124 FDFLSSGTTCYSRCLDYA-------RFRQICDETDSIMFADMSHISGL-IA--------GV----KGVTK--TGE----K  177 (337)
Q Consensus       124 pklII~~~S~~~~~~d~~-------~l~eia~~~ga~l~vD~AH~~Gl-i~--------g~----~~T~~--~Gg----~  177 (337)
                      ...||+. ..+++.+++.       +|+++|+++|++||+|+.| .|+ .+        ++    ...+|  .||    .
T Consensus       202 ~aavI~E-pv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~-tG~R~G~~ga~~~~gv~PDi~~~gK~lggG~p~~a  279 (433)
T PRK00615        202 VAGVIFE-PICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVV-TGFRVAQGGAAAIYHVKPDITVYGKILGGGLPAAA  279 (433)
T ss_pred             eEEEEEC-CCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccc-ccccccHhHHHHhcCCCCCeEEEcccccCCcceee
Confidence            3567765 5888776533       6889999999999999999 477 33        11    11122  123    2


Q ss_pred             hhh--hHHHHHhhccCCCCCCC--CcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh----CCCEEecCCCC
Q psy10669        178 ILY--DYEEKINNAVFPSLQGG--PHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK----RGYHVVTGGTD  249 (337)
Q Consensus       178 i~~--~l~~~i~~~~~p~~~g~--~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~----~G~~v~~~~t~  249 (337)
                      +++  ++.+.+.+.-...+.+|  .++...|+...++..+.+   ....+++.++.++|.++|++    .|+++.... .
T Consensus       280 v~~~~~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~~---~~~~~~~~~~g~~l~~~l~~~~~~~g~~v~~~r-~  355 (433)
T PRK00615        280 VVAHKSIMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCRE---QGFYTQLSTLEQNFLSPIEEMIRSQGFPVSLVR-Y  355 (433)
T ss_pred             eeecHHHHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHhc---ccHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEe-e
Confidence            232  46565542111112223  466666666666665533   24688888999999777655    566643211 1


Q ss_pred             CeEEEEEecCCCc------------chHHHHHHHhhcCceecc
Q psy10669        250 VHLILIDLRKNKL------------TGSKVELVLEEIAIACNK  280 (337)
Q Consensus       250 ~h~v~V~~~~~~~------------~~~~~~~~L~~~gI~v~~  280 (337)
                      .-+.-|.+.....            ....+...|.+.||++.+
T Consensus       356 G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~  398 (433)
T PRK00615        356 GSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQSAFSKGVYLSP  398 (433)
T ss_pred             ceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHHHHHCCeeecC
Confidence            2233333432110            123456666678999885

>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional

Probab=98.08  E-value=0.0018  Score=64.71  Aligned_cols=156  Identities=12%  Similarity=0.097  Sum_probs=85.9

Q ss_pred             ccEEEE-cCcc-cccccCh---HHHHHHhhhcCCeEEEeccccccccce----------------eeeec-c-------C
Q psy10669        124 FDFLSS-GTTC-YSRCLDY---ARFRQICDETDSIMFADMSHISGLIAG----------------VKGVT-K-------T  174 (337)
Q Consensus       124 pklII~-~~S~-~~~~~d~---~~l~eia~~~ga~l~vD~AH~~Gli~g----------------~~~T~-~-------~  174 (337)
                      +++|++ .+++ .+...+.   ++|.++|+++|+++++|+++.--...+                +.++. |       +
T Consensus       191 ~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~R  270 (430)
T PLN00145        191 TVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSISKRWVVPGWR  270 (430)
T ss_pred             ceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccCcEEEEeccccccCCCCee
Confidence            454444 4543 2466764   456677899999999999965322110                11111 2       1


Q ss_pred             Cchhhh----hH------HHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEE
Q psy10669        175 GEKILY----DY------EEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHV  243 (337)
Q Consensus       175 Gg~i~~----~l------~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v  243 (337)
                      =|+++.    ++      .+.+....  .+...++....+++..++..-.+..+++.++++.++.+.+.+.|.+. |+..
T Consensus       271 lG~iv~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~  348 (430)
T PLN00145        271 LGWIATCDPNGILKETKVVDSIRNYL--NISTDPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKEIKCITC  348 (430)
T ss_pred             EEEEEEecchhhhhhhHHHHHHHHHh--cccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence            255542    12      22333322  22323444454555444433112345677888888999999999884 7764


Q ss_pred             ecCCCCCeEEEEEecCC---Cc-ch-HHHHHHHhhcCceeccC
Q psy10669        244 VTGGTDVHLILIDLRKN---KL-TG-SKVELVLEEIAIACNKN  281 (337)
Q Consensus       244 ~~~~t~~h~v~V~~~~~---~~-~~-~~~~~~L~~~gI~v~~~  281 (337)
                      .......--++|.+...   +. +. ..+.++|++.||.+.+-
T Consensus       349 ~~~P~ga~y~~v~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG  391 (430)
T PLN00145        349 PHKPEGSMFVMVKLDLSCLSGIKDDMDFCCKLAKEESVVVLPG  391 (430)
T ss_pred             CcCCCeeeEEEeccChhhcCCCCCHHHHHHHHHHhCCEEEeCc
Confidence            32224455677776431   22 33 34556777789998773

>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type

Probab=98.06  E-value=0.00029  Score=69.18  Aligned_cols=216  Identities=13%  Similarity=0.104  Sum_probs=128.4

Q ss_pred             cCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCC-c---------------------------
Q psy10669         68 YGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALP-T---------------------------  119 (337)
Q Consensus        68 ~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~-~---------------------------  119 (337)
                      +..-++. ++-..+.+.++++|+.+...+ +-+...|||.++=+++..|++ +                           
T Consensus        32 HRs~~F~-~i~~e~~~~L~~l~~~~~~~~-v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g~FG~r~~~eia~~~g~~~v  109 (374)
T TIGR01365        32 HRSKLGK-EKLAEAIKKTREMLGVPADYL-IGIVPASDTGAVEMALWSMLGCRGVDVLAWESFGKGWVTDVTKQLKLPDV  109 (374)
T ss_pred             cCCHHHH-HHHHHHHHHHHHHhCCCCCcE-EEEECCchHHHHHHHHHHcCCCCCCeEEEECHHHHHHHHHHHHhcCCCCc
Confidence            4433333 344456679999999753222 335557778999888899884 3                           


Q ss_pred             --------------ccc-cccEEEE-cCcccccccChHHHHHHhhh-cCCeEEEeccccccccce------ee--eecc-
Q psy10669        120 --------------NNA-RFDFLSS-GTTCYSRCLDYARFRQICDE-TDSIMFADMSHISGLIAG------VK--GVTK-  173 (337)
Q Consensus       120 --------------~~a-~pklII~-~~S~~~~~~d~~~l~eia~~-~ga~l~vD~AH~~Gli~g------~~--~T~~-  173 (337)
                                    +.. ++.+.++ .+++-+...|++   +++++ .+++++||+.=++|-...      +.  ++-| 
T Consensus       110 ~~l~~~~g~~~~~~~ve~~~~v~~vhnETSTGv~npv~---~i~~~~~~~lliVDavSs~g~~~l~~d~iDv~~tgsQK~  186 (374)
T TIGR01365       110 RVLEAEYGKLPDLKKVDFKNDVVFTWNGTTSGVRVPNG---DFIPADREGLTICDATSAAFAQDLDYHKLDVVTFSWQKV  186 (374)
T ss_pred             EEEcCCCCCCCCHHHcCCCCCEEEecCCCchheecccc---ccccccCCCcEEEEccchhcCCCCChhHCcEEEEechhc
Confidence                          000 0123222 366666777765   44433 489999999988877661      22  3322 


Q ss_pred             ---CCch--hh-h-hHHHHHhh---------------------ccC-CCCCCCCcHHHHHHHHHHHHHHhch-hhHHHHH
Q psy10669        174 ---TGEK--IL-Y-DYEEKINN---------------------AVF-PSLQGGPHNHAIGAIATAMLQAQSD-EFKSYQA  223 (337)
Q Consensus       174 ---~Gg~--i~-~-~l~~~i~~---------------------~~~-p~~~g~~~~~~iaala~a~~e~~~~-~~~~y~~  223 (337)
                         -+|+  +. . +..++.+.                     ... +.+.-||+.+.+-++..+++++++. ..+...+
T Consensus       187 L~~ppGls~v~vs~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~  266 (374)
T TIGR01365       187 LGGEGAHGMLILSPRAVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIA  266 (374)
T ss_pred             cCCCCceEEEEECHHHHHHHhhcCCCCCChhhhccccccchhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHH
Confidence               1333  32 2 22121110                     001 1223366666666666667766553 4688889


Q ss_pred             HHHHHHHHHHHHHHhCC-CEEecC--CCCCeE-EEEEecCCCc-----c-----hHHHHHHHhhcCceeccCc------c
Q psy10669        224 QVKANASHLSDEMIKRG-YHVVTG--GTDVHL-ILIDLRKNKL-----T-----GSKVELVLEEIAIACNKNT------G  283 (337)
Q Consensus       224 ~v~~na~~l~~~L~~~G-~~v~~~--~t~~h~-v~V~~~~~~~-----~-----~~~~~~~L~~~gI~v~~~~------g  283 (337)
                      +-.++++++++.+++.| +.+...  ...++. +.+.+...++     +     ..++.+.|.+.||.+....      .
T Consensus       267 Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~G~~~~~~~~  346 (374)
T TIGR01365       267 RADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVCLKVVDPAIDALDEDAQADFAKELISTLEKEGVAYDIGSYRDAPSG  346 (374)
T ss_pred             HHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEEEEeCCccccccccchhhHHHHHHHHHHHHCCEEEeccccccCCCc
Confidence            99999999999999999 676642  123443 3344433333     2     6788889988898776322      7


Q ss_pred             cchhh
Q psy10669        284 ISLAA  288 (337)
Q Consensus       284 irig~  288 (337)
                      +|||.
T Consensus       347 fRIg~  351 (374)
T TIGR01365       347 LRIWC  351 (374)
T ss_pred             eEEec
Confidence            88874

This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.

>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated

Probab=98.05  E-value=6.8e-05  Score=74.89  Aligned_cols=145  Identities=19%  Similarity=0.197  Sum_probs=91.9

Q ss_pred             cChHHHHHHhhhcCCeEEEeccccccccc--e---------e----eeecc--CCchh-----h-h-hHHHHHhhc----
Q psy10669        138 LDYARFRQICDETDSIMFADMSHISGLIA--G---------V----KGVTK--TGEKI-----L-Y-DYEEKINNA----  189 (337)
Q Consensus       138 ~d~~~l~eia~~~ga~l~vD~AH~~Gli~--g---------~----~~T~~--~Gg~i-----~-~-~l~~~i~~~----  189 (337)
                      ..+++|+++|+++|++||+|+.| .|+ +  |         +    ...+|  .||++     + . ++.+.+...    
T Consensus       226 ~~L~~l~~lc~~~g~lLI~DEv~-tG~-GrtG~~fa~~~~gv~PDi~t~gK~l~gG~~p~~av~~~~~i~~~~~~~~~~~  303 (428)
T PRK07986        226 EWLKRVRKLCDREGILLIADEIA-TGF-GRTGKLFACEHAGIAPDILCLGKALTGGTMTLSATLTTREVAETISNGEAGC  303 (428)
T ss_pred             HHHHHHHHHHHHcCCEEEEeccc-cCC-ccCCCeeeecccCCCCCEEEechhhhCCcccCcchhchHHHHHHhhcCCCCc
Confidence            34678999999999999999999 775 3  1         1    11123  25654     1 2 455555432    


Q ss_pred             -cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEec-CCCCCeEEEEEecCCCcchHH
Q psy10669        190 -VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVT-GGTDVHLILIDLRKNKLTGSK  266 (337)
Q Consensus       190 -~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~-~~t~~h~v~V~~~~~~~~~~~  266 (337)
                       ....+++ .|+...|+...++..+.+ +  ++.+++.++.++|.+.|++. .+..++ --....++.|.+.... ....
T Consensus       304 ~~~~~T~~-g~p~~~aaa~a~L~~i~~-~--~~~~~~~~~g~~l~~~l~~l~~~~~i~~vRg~Gl~~~ve~~~~~-~~~~  378 (428)
T PRK07986        304 FMHGPTFM-GNPLACAVANASLSLLES-G--DWQQQVAAIEAQLREELAPLRDAPMVADVRVLGAIGVVETTRPV-NMAA  378 (428)
T ss_pred             cccCCCCC-cCHHHHHHHHHHHHHHHh-C--CHHHHHHHHHHHHHHHHHHHhcCCCEEeEeccceEEEEEeCCcc-cHHH
Confidence             1233444 466677766666766643 2  56899999999999999873 233222 0124667777776543 4566


Q ss_pred             HHHHHhhcCceeccCc-ccchhhh
Q psy10669        267 VELVLEEIAIACNKNT-GISLAAE  289 (337)
Q Consensus       267 ~~~~L~~~gI~v~~~~-girig~~  289 (337)
                      +.+.|.+.||.+.+.. .||+.-+
T Consensus       379 ~~~~l~~~Gl~~~~~g~~i~~~Pp  402 (428)
T PRK07986        379 LQRFFVEQGVWIRPFGKLIYLMPP  402 (428)
T ss_pred             HHHHHHHCCcEEEecCCEEEEeCC
Confidence            7788888899997632 5666433

>PRK06358 threonine-phosphate decarboxylase; Provisional

Probab=98.04  E-value=0.0017  Score=62.91  Aligned_cols=222  Identities=16%  Similarity=0.117  Sum_probs=128.2

Q ss_pred             ceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCc-hh
Q psy10669         32 GIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGS-PA  108 (337)
Q Consensus        32 ~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt-~A  108 (337)
                      .+.|-..+|..  +|.+.+++...+..  ..++|.      . ...+    .|+.++++++.+.    -+|.+++|+ ++
T Consensus        21 ~~~l~~~~~~~~~p~~~~~a~~~~~~~--~~~Y~~------~-~~~~----lr~~ia~~~~~~~----~~i~it~Ga~~~   83 (354)
T PRK06358         21 ILDFSANINPLGVPESLKQAITENLDK--LVEYPD------P-DYLE----LRKRIASFEQLDL----ENVILGNGATEL   83 (354)
T ss_pred             eEEecCCCCCCCCCHHHHHHHHHHHHh--hhcCCC------c-cHHH----HHHHHHHHhCCCh----hhEEECCCHHHH
Confidence            36776666764  88999998765321  112221      1 1122    3567788889876    379999995 67


Q ss_pred             HHHHHHhhCCc------------------------------c---------cc----cccEEEEc-Ccc-cccccChHH-
Q psy10669        109 NFAVCEKALPT------------------------------N---------NA----RFDFLSSG-TTC-YSRCLDYAR-  142 (337)
Q Consensus       109 N~~v~~aLl~~------------------------------~---------~a----~pklII~~-~S~-~~~~~d~~~-  142 (337)
                      ...++.++.+.                              +         +.    ++++|++. +.+ -+...+.++ 
T Consensus        84 l~~~~~~~~~~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~~P~NPtG~~~~~~~~  163 (354)
T PRK06358         84 IFNIVKVTKPKKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAANEIVLEEIKEEIDLVFLCNPNNPTGQLISKEEM  163 (354)
T ss_pred             HHHHHHHhCCCcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCccHHHHHhhccCCCEEEEeCCCCCCCCccCHHHH
Confidence            66666766322                              0         00    26776554 433 246666444 


Q ss_pred             --HHHHhhhcCCeEEEeccccc----c-------ccc-----eeeeec-c-------CCchhhh---hHHHHHhhccCCC
Q psy10669        143 --FRQICDETDSIMFADMSHIS----G-------LIA-----GVKGVT-K-------TGEKILY---DYEEKINNAVFPS  193 (337)
Q Consensus       143 --l~eia~~~ga~l~vD~AH~~----G-------li~-----g~~~T~-~-------~Gg~i~~---~l~~~i~~~~~p~  193 (337)
                        |.++|+++|+++++|++..-    +       .+.     .+..+. |       +-|+++.   ++.+.+.....+ 
T Consensus       164 ~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~~~~~~~~~~~~~-  242 (354)
T PRK06358        164 KKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSNKNLAEKLLQMREP-  242 (354)
T ss_pred             HHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhCCC-
Confidence              55678899999999999631    1       011     112222 1       2366543   366666654322 


Q ss_pred             CCCCCcHHHHHHHHHHHHHHhchhh-HHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCCCcchHHHHHHH
Q psy10669        194 LQGGPHNHAIGAIATAMLQAQSDEF-KSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKNKLTGSKVELVL  271 (337)
Q Consensus       194 ~~g~~~~~~iaala~a~~e~~~~~~-~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L  271 (337)
                        .+.+.....+...++.   ...+ ++.++.+.++.+.+.+.|.+. |+.+...  +..-+++.+..    ..++.+.|
T Consensus       243 --~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~--~g~f~~~~~~~----~~~~~~~l  311 (354)
T PRK06358        243 --WSINTFADLAGQTLLD---DKEYIKKTIQWIKEEKDFLYNGLSEFKGIKVYKP--SVNFIFFKLEK----PIDLRKEL  311 (354)
T ss_pred             --CcchHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCC--cceEEEEEcCc----hHHHHHHH
Confidence              1233333333333332   2223 566777888888899999885 7776642  33345666542    36777788


Q ss_pred             hhcCceeccCc
Q psy10669        272 EEIAIACNKNT  282 (337)
Q Consensus       272 ~~~gI~v~~~~  282 (337)
                      .+.||.+.+-.
T Consensus       312 ~~~gI~v~~~~  322 (354)
T PRK06358        312 LKKGILIRSCS  322 (354)
T ss_pred             HHCCeEEEECC
Confidence            88899998743

>PRK06082 4-aminobutyrate aminotransferase; Provisional

Probab=98.04  E-value=0.00052  Score=69.19  Aligned_cols=145  Identities=14%  Similarity=0.226  Sum_probs=77.2

Q ss_pred             hHHHHHHhhhcCCeEEEeccccccc--cc--------e----eeeecc--CCchh-h-----h-hHHHHHhhccCCCCCC
Q psy10669        140 YARFRQICDETDSIMFADMSHISGL--IA--------G----VKGVTK--TGEKI-L-----Y-DYEEKINNAVFPSLQG  196 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~~Gl--i~--------g----~~~T~~--~Gg~i-~-----~-~l~~~i~~~~~p~~~g  196 (337)
                      +++++++|+++|++||+|+.|+ |+  .+        |    +...+|  .||++ +     . ++.+..+.....+++ 
T Consensus       251 l~~lr~lc~~~g~llI~DEV~t-G~GRtG~~fa~e~~gv~PDiv~~gKgl~gG~~P~~av~~~~~i~~~~~~~~~~~T~-  328 (459)
T PRK06082        251 WKRVREICDKHNVLLIIDEIPN-GMGRTGEWFTHQAYGIEPDILCIGKGLGGGLVPIAAMITKDKYNTAAQISLGHYTH-  328 (459)
T ss_pred             HHHHHHHHHHcCCEEEEechhh-CCCccchhhHhHhhCCCCCEEEecccccCCCCcceEEEEcHHHHhhccCCCCCCCC-
Confidence            5678999999999999999997 43  22        1    111223  24542 2     2 333322222111223 


Q ss_pred             CCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCEEecC-CCCCeEEEEEecCCC----cc---hHH
Q psy10669        197 GPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYHVVTG-GTDVHLILIDLRKNK----LT---GSK  266 (337)
Q Consensus       197 ~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~v~~~-~t~~h~v~V~~~~~~----~~---~~~  266 (337)
                      +.|+...|+..+.+..+.+   ....+++.++.++|.+.|++.  .+.++.. -...-++-|.+....    .+   ...
T Consensus       329 ~gnpl~~aaa~a~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~  405 (459)
T PRK06082        329 EKSPLGCAAALATIEVIEQ---EGLLEKVKADSQFMRERLLEMKAKYPLIGDVRGIGLLWGVELVTDRHTKERAYDEAEA  405 (459)
T ss_pred             CcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeeccceeEEEEccCccccCccHHHHHH
Confidence            3455555555555555432   257889999999999999872  2332220 012223344443211    01   233


Q ss_pred             HHHHHhhcCceeccCc--ccchhhh
Q psy10669        267 VELVLEEIAIACNKNT--GISLAAE  289 (337)
Q Consensus       267 ~~~~L~~~gI~v~~~~--girig~~  289 (337)
                      +...+.+.|+.+.+..  .||+.-+
T Consensus       406 ~~~~~~~~Gvl~~~~~~~~i~~~Pp  430 (459)
T PRK06082        406 VLYRCLNNGLSFKVSQGNVIQLSPP  430 (459)
T ss_pred             HHHHHHhCCCEEEecCCCEEEEeCC
Confidence            4445556799887642  5666544

>PRK08636 aspartate aminotransferase; Provisional

Probab=98.03  E-value=0.0039  Score=61.44  Aligned_cols=155  Identities=8%  Similarity=0.077  Sum_probs=85.8

Q ss_pred             ccEEEEcCccc--ccccChHHHH---HHhhhcCCeEEEeccccc----cc--cc----------ee-eeec-c-------
Q psy10669        124 FDFLSSGTTCY--SRCLDYARFR---QICDETDSIMFADMSHIS----GL--IA----------GV-KGVT-K-------  173 (337)
Q Consensus       124 pklII~~~S~~--~~~~d~~~l~---eia~~~ga~l~vD~AH~~----Gl--i~----------g~-~~T~-~-------  173 (337)
                      +++|+...-.+  +...+.++++   ++|+++++++++|+++.-    |-  ..          .+ .++. |       
T Consensus       176 ~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~Gl  255 (403)
T PRK08636        176 PKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSKSYNMAGW  255 (403)
T ss_pred             ceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEecccccCCccc
Confidence            45666652133  4677776544   678999999999998652    11  00          01 2222 1       


Q ss_pred             CCchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCe
Q psy10669        174 TGEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVH  251 (337)
Q Consensus       174 ~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h  251 (337)
                      +-|+++.  ++.+.+.........+++.+...++ ..++... ....++.++...++.+.+.+.|.+.|+++... ...-
T Consensus       256 RiG~iv~~~~li~~~~~~~~~~~~~~~~~~q~~~-~~~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p-~~g~  332 (403)
T PRK08636        256 RVGFVVGNKKLVGALKKIKSWLDYGMFTPIQVAA-TIALDGD-QSCVEEIRETYRKRRDVLIESFANAGWELQKP-RASM  332 (403)
T ss_pred             eeeeeeCCHHHHHHHHHHHHHhcccCChHHHHHH-HHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHCCCcccCC-Ccce
Confidence            2466655  4555544332111123333333333 3333221 12234556677778888889998888876532 3445


Q ss_pred             EEEEEecCC--CcchHHHHH-HHhhcCceeccC
Q psy10669        252 LILIDLRKN--KLTGSKVEL-VLEEIAIACNKN  281 (337)
Q Consensus       252 ~v~V~~~~~--~~~~~~~~~-~L~~~gI~v~~~  281 (337)
                      .+++++.+.  +.+..++.. .+++.||.+.+-
T Consensus       333 ~~~~~l~~~~~~~~~~~l~~~ll~~~gV~v~pg  365 (403)
T PRK08636        333 FVWAKIPEPARHLGSLEFSKQLLTEAKVAVSPG  365 (403)
T ss_pred             EEEEECCCccCCCCHHHHHHHHHHhCCEEEecc
Confidence            667887642  223455554 466789998763

>PRK06149 hypothetical protein; Provisional

Probab=98.03  E-value=0.00048  Score=75.57  Aligned_cols=138  Identities=12%  Similarity=0.107  Sum_probs=74.6

Q ss_pred             hHHHHHHhhhcCCeEEEeccc-cccccc---------e----eeeecc-------CCchhhh-hHHHHHhh-ccCCCCCC
Q psy10669        140 YARFRQICDETDSIMFADMSH-ISGLIA---------G----VKGVTK-------TGEKILY-DYEEKINN-AVFPSLQG  196 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH-~~Gli~---------g----~~~T~~-------~Gg~i~~-~l~~~i~~-~~~p~~~g  196 (337)
                      ++.++++|+++|+++|+|+.| +.|-.+         |    +...+|       -|+++.. ++.+.+++ ..+-..+ 
T Consensus       767 L~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDivt~gK~lg~G~Pl~av~~~~~i~~~~~~~~~~~sT~-  845 (972)
T PRK06149        767 LQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDIITMAKGMGNGHPLGAVITRREIAEALEAEGYFFSST-  845 (972)
T ss_pred             HHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCCCCCEEEecccccCCeeeEEEEEcHHHHhhhccCCcccCCC-
Confidence            667889999999999999999 455544         1    111122       2333333 56665553 2221223 


Q ss_pred             CCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCEEecC-CCCCeEEEEEecCC-----C--cchHH
Q psy10669        197 GPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYHVVTG-GTDVHLILIDLRKN-----K--LTGSK  266 (337)
Q Consensus       197 ~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~v~~~-~t~~h~v~V~~~~~-----~--~~~~~  266 (337)
                      +.|+...|+..+.+..+.+   +...+++.+..++|.++|++.  .+.+++. -...-+.-|.+...     .  .....
T Consensus       846 ~gnP~~~aaala~L~~i~~---e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Gl~~gvel~~~~~~~~~~~~~~~~  922 (972)
T PRK06149        846 GGSPVSCRIGMAVLDVLRE---EKLQENARRVGDHLKARLEALADRHPLIGAVHGMGLYLGVELVRDRQTLEPATEETAA  922 (972)
T ss_pred             CCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeecceEEEEEEecCcccCCCChHHHHH
Confidence            4566666666565655532   245666777778888888762  1222210 01112333333211     0  01345


Q ss_pred             HHHHHhhcCceeccC
Q psy10669        267 VELVLEEIAIACNKN  281 (337)
Q Consensus       267 ~~~~L~~~gI~v~~~  281 (337)
                      +.+.|.+.||.+.+.
T Consensus       923 i~~~l~~~Gvl~~~~  937 (972)
T PRK06149        923 ICDRLLELGVIMQPT  937 (972)
T ss_pred             HHHHHHhCCeEEeec
Confidence            566667789998753

>PRK07049 methionine gamma-lyase; Validated

Probab=98.01  E-value=8.6e-05  Score=74.15  Aligned_cols=158  Identities=11%  Similarity=0.050  Sum_probs=100.7

Q ss_pred             ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669         70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------  119 (337)
Q Consensus        70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------  119 (337)
                      ++.....+|    +++++++|.+.     ++.+.||+.|+..++.+++++                              
T Consensus        81 ~~Pt~~~Le----~~lA~leg~~~-----~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v  151 (427)
T PRK07049         81 NHPNSEIVE----DRLAVYEGAES-----AALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFGVGAV  151 (427)
T ss_pred             CCcCHHHHH----HHHHHHhCCCc-----EEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcCcEEE
Confidence            345556787    57889999875     688999999999988888754                              


Q ss_pred             -----------c--c------ccccEEEEc-Ccc-cccccChHHHHHHhhh------cCCeEEEeccccccccc------
Q psy10669        120 -----------N--N------ARFDFLSSG-TTC-YSRCLDYARFRQICDE------TDSIMFADMSHISGLIA------  166 (337)
Q Consensus       120 -----------~--~------a~pklII~~-~S~-~~~~~d~~~l~eia~~------~ga~l~vD~AH~~Gli~------  166 (337)
                                 +  +      .++|+|++. +++ .+...|.+++.+|+++      +++++++|++-...+.-      
T Consensus       152 ~~~~~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~~~~~pl~~g  231 (427)
T PRK07049        152 GFADGLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGPVFQKPLEHG  231 (427)
T ss_pred             EEeCCCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccccccCCccccC
Confidence                       0  0      126777776 433 2478899999999988      79999999994332211      


Q ss_pred             --eeeeec-c--------CCchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHH
Q psy10669        167 --GVKGVT-K--------TGEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLS  233 (337)
Q Consensus       167 --g~~~T~-~--------~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~  233 (337)
                        .+..+. |        .+|+++.  ++.+.+..... .+.++..++....+..+++     ....++++..+|++.++
T Consensus       232 ~divv~S~SK~~gG~~glr~G~vv~~~~l~~~l~~~~~-~~g~~ls~~~a~l~~r~L~-----tl~~R~~~~~~~a~~la  305 (427)
T PRK07049        232 ADLSVYSLTKYVGGHSDLVAGAVLGRKALIRQVRALRS-AIGTQLDPHSCWMLGRSLE-----TLVLRMERANRNARAVA  305 (427)
T ss_pred             CCEEEEcCceeecCCCCcEEEEEECCHHHHHHHHHHHH-hcCCCCCHHHHHHHHcCCC-----hHHHHHHHHHHHHHHHH
Confidence              122222 2        2465554  56665554322 2222333333332222222     35677888899999999


Q ss_pred             HHHHhC-CCE
Q psy10669        234 DEMIKR-GYH  242 (337)
Q Consensus       234 ~~L~~~-G~~  242 (337)
                      +.|++. ++.
T Consensus       306 ~~L~~~p~V~  315 (427)
T PRK07049        306 EFLRDHPKVE  315 (427)
T ss_pred             HHHHhCCCcc
Confidence            999984 554

>PRK06107 aspartate aminotransferase; Provisional

Probab=98.01  E-value=0.0016  Score=64.25  Aligned_cols=250  Identities=11%  Similarity=0.038  Sum_probs=134.6

Q ss_pred             HHHHHHHhhcccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCc
Q psy10669         20 SLIKKEKHRQINGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWG   97 (337)
Q Consensus        20 ~~~~~e~~rq~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~   97 (337)
                      .++.+.......-++|-..+...  +|.+.+++...+.+. ..+|+   ...|..   ++.+...+.+++.+|.+...  
T Consensus        23 ~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~-~~~Y~---~~~G~~---~lr~~ia~~l~~~~g~~~~~--   93 (402)
T PRK06107         23 ARARELRAAGRSIVDLTVGEPDFDTPDHIKQAAVAAIERG-ETKYT---LVNGTP---ALRKAIIAKLERRNGLHYAD--   93 (402)
T ss_pred             HHHHHHHhccCCEEEcCCCCCCCCCCHHHHHHHHHHHHcC-CCCCC---CCCCCH---HHHHHHHHHHHHhcCCCCCh--
Confidence            34443333333457776666655  588888887765421 11111   112332   23222234566777764311  


Q ss_pred             ceeecCCC-chhHHHHHHhhCCc--------------------------------------------cc-c-cccEEEE-
Q psy10669         98 CNVQPYSG-SPANFAVCEKALPT--------------------------------------------NN-A-RFDFLSS-  129 (337)
Q Consensus        98 ~~v~~~Sg-t~AN~~v~~aLl~~--------------------------------------------~~-a-~pklII~-  129 (337)
                      .+|.+++| ++|...++.+++++                                            +. . ++++|++ 
T Consensus        94 ~~i~~t~G~~~al~~~~~~~~~~gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~l~  173 (402)
T PRK06107         94 NEITVGGGAKQAIFLALMATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAITPRTRWLILN  173 (402)
T ss_pred             hhEEEeCCHHHHHHHHHHHhcCCCCEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcCcCceEEEEE
Confidence            25888898 57877667777643                                            00 0 2455554 


Q ss_pred             cCcc-cccccChHH---HHHHhhhc-CCeEEEeccccc----c--ccc------e------eeeec-c-------CCchh
Q psy10669        130 GTTC-YSRCLDYAR---FRQICDET-DSIMFADMSHIS----G--LIA------G------VKGVT-K-------TGEKI  178 (337)
Q Consensus       130 ~~S~-~~~~~d~~~---l~eia~~~-ga~l~vD~AH~~----G--li~------g------~~~T~-~-------~Gg~i  178 (337)
                      ++++ .+...+.++   +.++|+++ |+++++|+++.-    +  ...      +      +.++. |       +-|++
T Consensus       174 ~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~  253 (402)
T PRK06107        174 APSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYA  253 (402)
T ss_pred             CCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccceeee
Confidence            3544 346666554   55677887 999999998742    1  010      1      11221 1       22555


Q ss_pred             hh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEE
Q psy10669        179 LY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILI  255 (337)
Q Consensus       179 ~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V  255 (337)
                      +.  ++.+.+..... ....+++....+++...+..- +...+..+++..++.+.+.+.|++. |+.+... ..+-.+++
T Consensus       254 ~~~~~~~~~~~~~~~-~~~~~~s~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~p-~gg~~~~~  330 (402)
T PRK06107        254 AGPADLIAAINKLQS-QSSSCPSSISQAAAAAALNGD-QSFVTESVAVYKQRRDYALALLNAIPGLSCLVP-DGAFYLYV  330 (402)
T ss_pred             ecCHHHHHHHHHHHH-hcccCCChHHHHHHHHHhcCC-hHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCC-CcceEEee
Confidence            54  46665554321 112245555555555554321 2233566778888888899999875 7776532 33445666


Q ss_pred             EecC-------CCc---chHH-HHHHHhhcCceeccC
Q psy10669        256 DLRK-------NKL---TGSK-VELVLEEIAIACNKN  281 (337)
Q Consensus       256 ~~~~-------~~~---~~~~-~~~~L~~~gI~v~~~  281 (337)
                      +++.       .+.   +..+ +...+++.||.+.+-
T Consensus       331 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg  367 (402)
T PRK06107        331 NCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQG  367 (402)
T ss_pred             ecccccccccccccCCCCHHHHHHHHHHhCCEEEeCc
Confidence            6632       111   3334 446667789999864

>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

Probab=97.99  E-value=0.0021  Score=63.52  Aligned_cols=242  Identities=14%  Similarity=0.099  Sum_probs=140.6

Q ss_pred             cceeeeccCC--CCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-ch
Q psy10669         31 NGIELIASEN--FTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SP  107 (337)
Q Consensus        31 ~~i~l~asen--~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~  107 (337)
                      +.|+|-..|-  -.|+.+++++...+.+-- ..+.   -..|....   -+...+...+-+|.+...= .+|..++| ++
T Consensus        29 ~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~~-~~Y~---~~~G~~~L---Reaia~~~~~~~~~~~~~~-~eiivt~Ga~~  100 (393)
T COG0436          29 DVIDLSIGEPDFPTPEHIIEAAIEALEEGG-THYT---PSAGIPEL---REAIAEKYKRRYGLDVDPE-EEIIVTAGAKE  100 (393)
T ss_pred             CEEEeCCCCCCCCCCHHHHHHHHHHHhccc-CCCC---CCCCCHHH---HHHHHHHHHHHhCCCCCCC-CeEEEeCCHHH
Confidence            4677777666  458889999887654310 0111   12333333   2222345566666332100 23888888 57


Q ss_pred             hHHHHHHhhCCc--------------------------------c----------c--c---cccEEEEc-Ccc-ccccc
Q psy10669        108 ANFAVCEKALPT--------------------------------N----------N--A---RFDFLSSG-TTC-YSRCL  138 (337)
Q Consensus       108 AN~~v~~aLl~~--------------------------------~----------~--a---~pklII~~-~S~-~~~~~  138 (337)
                      |+..++.+++.+                                +          +  +   ++|+|+++ +++ -+...
T Consensus       101 al~~~~~a~~~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~ktk~i~ln~P~NPTGav~  180 (393)
T COG0436         101 ALFLAFLALLNPGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITPKTKAIILNSPNNPTGAVY  180 (393)
T ss_pred             HHHHHHHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCccceEEEEeCCCCCcCcCC
Confidence            898889999765                                0          0  0   26788885 433 23555


Q ss_pred             ChH---HHHHHhhhcCCeEEEeccccccccc------------e-----e-ee--------eccCCchhhh---hHHHHH
Q psy10669        139 DYA---RFRQICDETDSIMFADMSHISGLIA------------G-----V-KG--------VTKTGEKILY---DYEEKI  186 (337)
Q Consensus       139 d~~---~l~eia~~~ga~l~vD~AH~~Gli~------------g-----~-~~--------T~~~Gg~i~~---~l~~~i  186 (337)
                      +-+   .|.++|+++|++|+.|+.= .+++=            .     + ..        ||-+-|++++   ++.+.+
T Consensus       181 ~~~~l~~i~~~a~~~~i~ii~DEiY-~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~~~~~l~~~~  259 (393)
T COG0436         181 SKEELKAIVELAREHDIIIISDEIY-EELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVGPPEELIAAL  259 (393)
T ss_pred             CHHHHHHHHHHHHHcCeEEEEehhh-hhcccCCCCcCCHhhcCCCcceEEEEecccccccccccceeEeecChHHHHHHH
Confidence            555   4557889999999999872 22211            1     1 11        1223477764   344433


Q ss_pred             hhccCCCCCCCCcHHHHHHHHHHHHHHhc-hhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCCCcch
Q psy10669        187 NNAVFPSLQGGPHNHAIGAIATAMLQAQS-DEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKNKLTG  264 (337)
Q Consensus       187 ~~~~~p~~~g~~~~~~iaala~a~~e~~~-~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~~~~~  264 (337)
                      .. +...+..+++.+...|...++..-.. ......++...++.+.+.+.|.+. |+.+.....-..-+++++....-+-
T Consensus       260 ~~-~~~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~~p~Ga~Y~~~~i~~~~d~~  338 (393)
T COG0436         260 RK-LKSYLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIGGLSVVKPPEGAFYLFPKIPELLDSE  338 (393)
T ss_pred             HH-HHHhcccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccCCCeeEEEEeecCCCCCHH
Confidence            31 12233335666666666666654311 233455678899999999999975 4888753334566778877642133


Q ss_pred             HHHHHHHhhcCceeccCc
Q psy10669        265 SKVELVLEEIAIACNKNT  282 (337)
Q Consensus       265 ~~~~~~L~~~gI~v~~~~  282 (337)
                      ..+.++|++.||.|.+-.
T Consensus       339 ~f~~~Ll~~~gV~v~PG~  356 (393)
T COG0436         339 EFAKKLLEEAGVAVVPGS  356 (393)
T ss_pred             HHHHHHHHhCCEEEeccc
Confidence            455566677899998833

>PRK07590 L,L-diaminopimelate aminotransferase; Validated

Probab=97.99  E-value=0.0028  Score=62.61  Aligned_cols=155  Identities=12%  Similarity=0.067  Sum_probs=85.6

Q ss_pred             ccEEEEcCccc--ccccChHH---HHHHhhhcCCeEEEeccccc----cc-c------c------eeeeec-c-------
Q psy10669        124 FDFLSSGTTCY--SRCLDYAR---FRQICDETDSIMFADMSHIS----GL-I------A------GVKGVT-K-------  173 (337)
Q Consensus       124 pklII~~~S~~--~~~~d~~~---l~eia~~~ga~l~vD~AH~~----Gl-i------~------g~~~T~-~-------  173 (337)
                      +|+|++..-.+  +...+.++   |.++|+++|++|+.|+++.-    +- .      .      .+.+|. |       
T Consensus       177 ~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~pGl  256 (409)
T PRK07590        177 VDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSFSKTAGFTGT  256 (409)
T ss_pred             ceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecCccccCCcCc
Confidence            57666641133  46666655   44678899999999998752    21 0      0      112332 2       


Q ss_pred             CCchhhh--hHHHH------------HhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC
Q psy10669        174 TGEKILY--DYEEK------------INNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR  239 (337)
Q Consensus       174 ~Gg~i~~--~l~~~------------i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~  239 (337)
                      +-|+++.  ++.+.            .... ......+++.....+++.++..-.....++.++++.++.+.+.+.|.+.
T Consensus       257 RiG~~i~~~~li~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~  335 (409)
T PRK07590        257 RCAYTVVPKELKGKTSDGEGVSLNSLWNRR-QSTKFNGVSYIVQRAAEAVYSPEGKAQIKELIDYYMENAKIIREGLESA  335 (409)
T ss_pred             eeEEEEcCHHHhhhccccchhhhHHHHHHH-HhhcccCcCHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            1266654  44431            1111 1111122333344444344321111233456778888888999999999


Q ss_pred             CCEEecCCCCCeEEEEEecCCCcchHHHHHHH-hhcCceeccC
Q psy10669        240 GYHVVTGGTDVHLILIDLRKNKLTGSKVELVL-EEIAIACNKN  281 (337)
Q Consensus       240 G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L-~~~gI~v~~~  281 (337)
                      |+++..+ ..+..+++++.. +.+..++...| ++.||.+.+-
T Consensus       336 ~~~~~~~-~g~~f~wi~~~~-~~~~~~~~~~l~~~~gv~v~pg  376 (409)
T PRK07590        336 GFEVYGG-VNAPYIWVKTPD-GMSSWDFFDKLLQEANVVGTPG  376 (409)
T ss_pred             CCceecC-CcceEEEEECCC-CCCHHHHHHHHHHHCCEEEeCh
Confidence            9887642 345567888865 34555555554 5689998763

>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases

Probab=97.98  E-value=1.4e-05  Score=75.88  Aligned_cols=195  Identities=17%  Similarity=0.213  Sum_probs=115.9

Q ss_pred             ccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhh
Q psy10669         37 ASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKA  116 (337)
Q Consensus        37 asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aL  116 (337)
                      .|-| .+|++++++...  +   .|.   -.|++-....++|    ++++++||.+.     .+.++|||.||..++.++
T Consensus         3 ~SD~-~~~~m~~a~~~a--~---~gd---~~Yg~D~~~~~l~----~~i~~l~g~e~-----a~f~~sGT~An~~al~~~   64 (290)
T PF01212_consen    3 RSDT-PTPAMLEAMAAA--N---VGD---DAYGEDPTTARLE----ERIAELFGKEA-----ALFVPSGTMANQLALRAH   64 (290)
T ss_dssp             S-SS-S-HHEEHHHHHT--T---SB----CCTTSSHHHHHHH----HHHHHHHTSSE-----EEEESSHHHHHHHHHHHH
T ss_pred             CccC-CCHHHHHHHHcc--c---cCC---cccCCChhHHHHH----HHHHHHcCCCE-----EEEeCCCChHHHHHHHHH
Confidence            4556 889999999542  2   122   2477777888898    57889999985     577899999999999999


Q ss_pred             CCc------------------------------------------------cc-----ccccEEEEcCcc-c--ccccCh
Q psy10669        117 LPT------------------------------------------------NN-----ARFDFLSSGTTC-Y--SRCLDY  140 (337)
Q Consensus       117 l~~------------------------------------------------~~-----a~pklII~~~S~-~--~~~~d~  140 (337)
                      ++|                                                +.     .+|++|.++.+. +  +...+.
T Consensus        65 ~~~~~~vi~~~~aHi~~~E~ga~~~~~G~~~~~l~~~~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~  144 (290)
T PF01212_consen   65 LRPGESVICADTAHIHFDETGAIEELSGAKLIPLPSDDDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSL  144 (290)
T ss_dssp             HHTTEEEEEETTEHHHHSSTTHHHHHTTCEEEEEBECTGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---H
T ss_pred             HhcCCceeccccceeeeeccchhhHhcCcEEEECCCcccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCH
Confidence            754                                                00     126788887444 4  677777


Q ss_pred             HHHH---HHhhhcCCeEEEeccccc------cccc--------eeeeeccC------Cchhhh--hH-HHH--HhhccCC
Q psy10669        141 ARFR---QICDETDSIMFADMSHIS------GLIA--------GVKGVTKT------GEKILY--DY-EEK--INNAVFP  192 (337)
Q Consensus       141 ~~l~---eia~~~ga~l~vD~AH~~------Gli~--------g~~~T~~~------Gg~i~~--~l-~~~--i~~~~~p  192 (337)
                      ++|+   ++|+++|..|+.|.|=.+      |...        .+.+.++|      |++++.  ++ .+.  ..+..-.
T Consensus       145 ~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~~~~~e~~~~~D~v~~~~tK~~g~~~Gavl~~~~~~i~~~~~~~k~~gg  224 (290)
T PF01212_consen  145 EELRAISELAREHGLPLHMDGARLANAAAALGVSLAEIAAGADSVSFGGTKNGGAPGGAVLAGNKEFIAKARRQRKRLGG  224 (290)
T ss_dssp             HHHHHHHHHHHHHT-EEEEEETTHHHHHCHHHHHHHHHHTTSSEEEEETTSTT-SSSEEEEEESHHHHHHHHHHHHHHTH
T ss_pred             HHHHHHHHHHHhCceEEEEehhhHHHhhhcccccHHHHhhhCCEEEEEEEcccccccceEEEechHHHHHHHHHHHHhcc
Confidence            7655   788999999999999543      2222        23333333      455544  33 221  1111111


Q ss_pred             CC-CCCCcHHHHHH----HHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEE
Q psy10669        193 SL-QGGPHNHAIGA----IATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILID  256 (337)
Q Consensus       193 ~~-~g~~~~~~iaa----la~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~  256 (337)
                      ++ +.+    .+++    ...++.. . ..+.+...+-.++++.|++.|...|+.+.. .++++++.++
T Consensus       225 ~~~~~G----~~~a~~~~~~~~l~~-l-~~~~~~~~~~~~~A~~La~~l~~~~~~~~~-~~~tn~~~~~  286 (290)
T PF01212_consen  225 GMRQAG----VLAAAELYQFAALRA-L-ELWLERARHANAMAKRLAAGLEALGGVLPR-PVETNQVFVD  286 (290)
T ss_dssp             HHHHTT----HHHHHHHHHHHHHCH-E-ECSHHHHHCHHHHHHCHHHCHHEECEEEET-TSS-HHHHHH
T ss_pred             Ceeecc----eeeeechhhHHHHHH-H-HhhHHHHHHHHHHHHHHHHHHHHCCCcccC-CCCCcEEeEE
Confidence            11 111    1222    1122222 1 244677888899999999999999988664 3555554443

It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....

>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase

Probab=97.97  E-value=0.0012  Score=65.42  Aligned_cols=137  Identities=12%  Similarity=0.102  Sum_probs=76.2

Q ss_pred             hHHHHHHhhhcCCeEEEeccccccccce---------e---eeec-c------CCchhhh--hHHHHHhhc--cCCCCCC
Q psy10669        140 YARFRQICDETDSIMFADMSHISGLIAG---------V---KGVT-K------TGEKILY--DYEEKINNA--VFPSLQG  196 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~~Gli~g---------~---~~T~-~------~Gg~i~~--~l~~~i~~~--~~p~~~g  196 (337)
                      +++|+++|+++|++||+|+.| .|+..|         +   ..|. |      ..|.+++  ++.+.+.+.  .+-+.+-
T Consensus       218 l~~l~~l~~~~~~llI~DEv~-~g~r~g~~~~~~~~~~~pDi~t~sK~l~~G~pig~v~~~~~i~~~~~~~~~~~~~~T~  296 (423)
T TIGR00713       218 LAGLRALTEEYGSLLIFDEVM-TGFRVALGGAQEYFGVEPDLTTLGKIIGGGLPVGAFGGRREIMERLAPEGPVYQAGTL  296 (423)
T ss_pred             HHHHHHHHHHhCCEEEEEccc-cccccCcchhHHHhCCCcchhhhhhhhcCCCceeeeeEHHHHHHhhCcCCCeeeccCC
Confidence            568899999999999999999 455321         1   0111 1      1233333  566666531  1112222


Q ss_pred             CCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh----CCCEEecCCCCCeEEEEEecCCCc---------c
Q psy10669        197 GPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK----RGYHVVTGGTDVHLILIDLRKNKL---------T  263 (337)
Q Consensus       197 ~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~----~G~~v~~~~t~~h~v~V~~~~~~~---------~  263 (337)
                      +.++...++..+++..+.+.   .+.+++.+..+++++.|.+    .|+..... ....++.|.+.....         +
T Consensus       297 ~~~~~~~aaa~a~l~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~-~~g~~~~v~~~~~~~~~~~~~~~~~  372 (423)
T TIGR00713       297 SGNPLAMAAGLATLKLLDEE---GVYTELDELAKRLAEGLSEVLEDTGIPHTVN-RVGSMFSLFFTEEEVTNYADAKKSD  372 (423)
T ss_pred             CCCHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-eeccEEEEEEecCCCCChhhhhccc
Confidence            45666666666667665432   2566777777777666643    56543210 134455555543211         1


Q ss_pred             h---HHHHHHHhhcCceeccC
Q psy10669        264 G---SKVELVLEEIAIACNKN  281 (337)
Q Consensus       264 ~---~~~~~~L~~~gI~v~~~  281 (337)
                      .   ..+.+.|.+.||.+...
T Consensus       373 ~~~~~~~~~~l~~~Gv~v~~~  393 (423)
T TIGR00713       373 TELFAKFFHEMLDKGVFLPPS  393 (423)
T ss_pred             HHHHHHHHHHHHHCCeEEecC
Confidence            1   24555666789998753

This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.

>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=97.96  E-value=0.00013  Score=72.53  Aligned_cols=147  Identities=16%  Similarity=0.152  Sum_probs=88.6

Q ss_pred             hHHHHHHhhhcCCeEEEecccccccc--c--------e----eeeecc--CCchh-----h-h-hHHHHHhhc--cCCCC
Q psy10669        140 YARFRQICDETDSIMFADMSHISGLI--A--------G----VKGVTK--TGEKI-----L-Y-DYEEKINNA--VFPSL  194 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~~Gli--~--------g----~~~T~~--~Gg~i-----~-~-~l~~~i~~~--~~p~~  194 (337)
                      +++|+++|+++|++|++|+.| .|+-  +        +    +...+|  .||++     + . ++.+.+...  -.+.+
T Consensus       223 l~~l~~lc~~~g~llI~DEv~-tg~gr~G~~~a~~~~~v~pDi~~~~K~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~  301 (423)
T PRK05964        223 LAELRRICDRHGVLLIFDEIA-TGFGRTGTLFACEQAGVSPDIMCLSKGLTGGYLPLAATLCTAEIFEAFYSDDRAKAFM  301 (423)
T ss_pred             HHHHHHHHHHcCCEEEEechh-hCCCcCcchhHHHhcCCCCCeeeeehhhhcCcccceEEEEcHHHHHhhhcCCcccccc
Confidence            667889999999999999999 4431  1        1    111223  14432     2 2 465555321  01111


Q ss_pred             C-C--CCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEec-CCCCCeEEEEEecCCC--cchHHH
Q psy10669        195 Q-G--GPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVT-GGTDVHLILIDLRKNK--LTGSKV  267 (337)
Q Consensus       195 ~-g--~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~-~~t~~h~v~V~~~~~~--~~~~~~  267 (337)
                      . +  +.++..+++..+++..+.+   +...+++.++.++|.+.|++. ++..+. ......++.+.+.+..  .....+
T Consensus       302 ~~~T~~~np~~~aaa~a~l~~l~~---~~~~~~~~~~g~~l~~~l~~l~~~~~i~~vrg~Gl~~~i~l~~~~~~~~~~~l  378 (423)
T PRK05964        302 HSPSYTANPLACAAANASLDLFED---EPVLERVAALSAGLAEGLEPFRDLPGVADVRVLGAIGAVELDRPVLERDGPAL  378 (423)
T ss_pred             cCCCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHhhccCCCeEEeecccEEEEEEeccCcchhHHHHH
Confidence            1 2  3577777777777766643   346789999999999998874 333222 1134556667775432  124567


Q ss_pred             HHHHhhcCceeccCc-ccchhhhh
Q psy10669        268 ELVLEEIAIACNKNT-GISLAAEI  290 (337)
Q Consensus       268 ~~~L~~~gI~v~~~~-girig~~~  290 (337)
                      .+.|.+.||.+.... .|||..+.
T Consensus       379 ~~~l~~~Gv~v~~~~~~lR~~p~l  402 (423)
T PRK05964        379 RAFALERGVLLRPLGNTIYLMPPY  402 (423)
T ss_pred             HHHHHHCCeEEEecCCEEEEeCCc
Confidence            777888899987643 57776553

>PRK02610 histidinol-phosphate aminotransferase; Provisional

Probab=97.96  E-value=0.0027  Score=61.97  Aligned_cols=157  Identities=10%  Similarity=0.078  Sum_probs=90.6

Q ss_pred             ccEEEEcCccc--ccccChHHHHHHhhh-cCCeEEEeccccc--c--ccc--------eeeeec-c-------CCchhhh
Q psy10669        124 FDFLSSGTTCY--SRCLDYARFRQICDE-TDSIMFADMSHIS--G--LIA--------GVKGVT-K-------TGEKILY  180 (337)
Q Consensus       124 pklII~~~S~~--~~~~d~~~l~eia~~-~ga~l~vD~AH~~--G--li~--------g~~~T~-~-------~Gg~i~~  180 (337)
                      +|+|++....+  +...+.+++.++++- +++++++|+++.-  +  .+.        .+.+|. |       +-|++++
T Consensus       169 ~k~i~l~~P~NPTG~~~s~~~l~~l~~~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~ivi~SfSK~~g~~GlRiG~~v~  248 (374)
T PRK02610        169 VRVVFVVHPNSPTGNPLTAAELEWLRSLPEDILVVIDEAYFEFSQTTLVGELAQHPNWVILRTFSKAFRLAAHRVGYAIG  248 (374)
T ss_pred             ceEEEEeCCCCCCCCCCCHHHHHHHHhccCCcEEEEeccccccCccchHHHHhcCCCEEEEEecchhccCcccceeeeec
Confidence            67787653344  477777777776532 3899999999741  1  011        122332 2       2366665


Q ss_pred             --hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEe
Q psy10669        181 --DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDL  257 (337)
Q Consensus       181 --~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~  257 (337)
                        ++.+.+.....+.  + .+.....+...++.+.  ..+.+..++..+.-+.+.+.|.+. |+.+..  +...-+++.+
T Consensus       249 ~~~l~~~l~~~~~~~--~-~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p--~~g~f~~~~l  321 (374)
T PRK02610        249 HPELIAVLEKVRLPY--N-LPSFSQLAAQLALEHR--QELLAAIPEILQERDRLYQALQELPQLRVWP--SAANFLYLRL  321 (374)
T ss_pred             CHHHHHHHHHhcCCC--C-CCHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHHHHHHhCCCcEeCC--CcceEEEEeC
Confidence              5666666543332  2 2233333333443321  233333445555556677777664 776543  3444577877


Q ss_pred             cCCCcchHHHHHHHhhcCceeccCc-ccchhh
Q psy10669        258 RKNKLTGSKVELVLEEIAIACNKNT-GISLAA  288 (337)
Q Consensus       258 ~~~~~~~~~~~~~L~~~gI~v~~~~-girig~  288 (337)
                      .. +.+..++.+.|.+.||.+.... .+||+.
T Consensus       322 ~~-~~~~~~~~~~l~~~gi~v~~~~~~lRls~  352 (374)
T PRK02610        322 SQ-DAALAALHQALKAQGTLVRHTGGGLRITI  352 (374)
T ss_pred             CC-CCCHHHHHHHHHHCCEEEEeCCCeEEEeC
Confidence            54 3467888888988999997533 788864

>PRK06207 aspartate aminotransferase; Provisional

Probab=97.96  E-value=0.0022  Score=63.46  Aligned_cols=243  Identities=9%  Similarity=0.019  Sum_probs=130.2

Q ss_pred             cccceeeecc-CCC--CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC
Q psy10669         29 QINGIELIAS-ENF--TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG  105 (337)
Q Consensus        29 q~~~i~l~as-en~--~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg  105 (337)
                      +..-++|--. .|.  .+|.+.+++...+.+....+|+.   ..|..   ++-....+.+++.+|.+-.. .-+|..++|
T Consensus        38 ~~~~i~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~---~~G~~---~LR~aia~~l~~~~g~~~~~-~~~I~it~G  110 (405)
T PRK06207         38 PGRPVDFSHGDVDAHEPTPGAFELFSAGVERGGVQAYTE---YRGDA---DIRELLAARLAAFTGAPVDA-ADELIITPG  110 (405)
T ss_pred             CCCceecCCcCCCCCCCCHHHHHHHHHHHhcCCCccCCC---CCCCH---HHHHHHHHHHHHHhCCCCCC-CCCEEEeCC
Confidence            3445666533 342  46788888876543211112221   12332   23222234666777853110 014777787


Q ss_pred             -chhHHHHHHhhCCc------------------------------c--------------cc-----cccEEEEc-Ccc-
Q psy10669        106 -SPANFAVCEKALPT------------------------------N--------------NA-----RFDFLSSG-TTC-  133 (337)
Q Consensus       106 -t~AN~~v~~aLl~~------------------------------~--------------~a-----~pklII~~-~S~-  133 (337)
                       +++...++.+++++                              .              +.     ++|+|++. +++ 
T Consensus       111 a~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~P~NP  190 (405)
T PRK06207        111 TQGALFLAVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKAGVRVFLFSNPNNP  190 (405)
T ss_pred             cHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhhcCeEEEECCCCCC
Confidence             56777777888654                              0              00     15655444 533 


Q ss_pred             cccccCh---HHHHHHhhhcCCeEEEeccccc----c-----cc--c------eeeeec-c-------CCchhhh--hHH
Q psy10669        134 YSRCLDY---ARFRQICDETDSIMFADMSHIS----G-----LI--A------GVKGVT-K-------TGEKILY--DYE  183 (337)
Q Consensus       134 ~~~~~d~---~~l~eia~~~ga~l~vD~AH~~----G-----li--~------g~~~T~-~-------~Gg~i~~--~l~  183 (337)
                      -+...+.   ++|.++|+++|+++++|+++.-    |     +.  .      .++++. |       +-|+++.  ++.
T Consensus       191 TG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~~~~l~  270 (405)
T PRK06207        191 AGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAFGSPAII  270 (405)
T ss_pred             CCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccceEEEEcCHHHH
Confidence            2466664   4566778999999999999753    2     11  0      112222 1       2366654  465


Q ss_pred             HHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCCCc
Q psy10669        184 EKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKNKL  262 (337)
Q Consensus       184 ~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~~~  262 (337)
                      +.+.....+... +......+++..++.+- ....++..++..++.+.+.+.|.+. |+.+... ...-.+++++...+.
T Consensus       271 ~~~~~~~~~~~~-~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p-~gg~fl~~~l~~~~~  347 (405)
T PRK06207        271 DRMEKLQAIVSL-RAAGYSQAVLRTWFSEP-DGWMKDRIARHQAIRDDLLRVLRGVEGVFVRAP-QAGSYLFPRLPRLAV  347 (405)
T ss_pred             HHHHHHHhHhcc-CCCHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHhcCCCceecCC-CeeEEEEEeCcccCC
Confidence            555433221112 22223344444443221 1123555666777777888888775 7776531 234467788865445


Q ss_pred             chHHHHHHHh-hcCceeccC
Q psy10669        263 TGSKVELVLE-EIAIACNKN  281 (337)
Q Consensus       263 ~~~~~~~~L~-~~gI~v~~~  281 (337)
                      +..++.+.|. ++||.+.+-
T Consensus       348 ~~~~~~~~l~~~~gV~v~pG  367 (405)
T PRK06207        348 SLHDFVKILRLQAGVIVTPG  367 (405)
T ss_pred             CHHHHHHHHHHhcCEEEeCc
Confidence            6677777775 689998863

>PRK15481 transcriptional regulatory protein PtsJ; Provisional

Probab=97.91  E-value=0.0014  Score=65.25  Aligned_cols=150  Identities=9%  Similarity=0.038  Sum_probs=91.0

Q ss_pred             ccEEEEcC-ccc--ccccChH---HHHHHhhhc-CCeEEEeccccc----c---ccc------eeeeec-c------CCc
Q psy10669        124 FDFLSSGT-TCY--SRCLDYA---RFRQICDET-DSIMFADMSHIS----G---LIA------GVKGVT-K------TGE  176 (337)
Q Consensus       124 pklII~~~-S~~--~~~~d~~---~l~eia~~~-ga~l~vD~AH~~----G---li~------g~~~T~-~------~Gg  176 (337)
                      +|+|++.+ -.+  +...+.+   +|.++|+++ +++++.|+++.-    +   .+.      .+.+|. |      +-|
T Consensus       212 ~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~GlRiG  291 (431)
T PRK15481        212 ARAVILTPRAHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSPYHSVIPQTTQRWALIRSVSKALGPDLRLA  291 (431)
T ss_pred             CCEEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCCCCCCCcCCCCCEEEEeeeccccCCCceeE
Confidence            67776652 233  4777776   677888999 999999998641    1   111      122332 1      236


Q ss_pred             hhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhh----HHHHHHHHHHHHHHHHHHHhCCCEEecCCCCC
Q psy10669        177 KILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEF----KSYQAQVKANASHLSDEMIKRGYHVVTGGTDV  250 (337)
Q Consensus       177 ~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~----~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~  250 (337)
                      +++.  ++.+.+.....+... +.+.....+++.++..   .++    ++.++++.++-+.+.+.|.+.|+.+... ..+
T Consensus       292 ~~i~~~~~~~~~~~~~~~~~~-~~s~~~q~a~~~~l~~---~~~~~~l~~~~~~~~~~r~~~~~~L~~~~~~~~~p-~gg  366 (431)
T PRK15481        292 FVASDSATSARLRLRLNSGTQ-WVSHLLQDLVYACLTD---PEYQARLAQARLFYAQRRQKLARALQQYGIAIPSP-GDG  366 (431)
T ss_pred             EEeCCHHHHHHHHHHHhcccc-CCCHHHHHHHHHHHhC---ccHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccC-CCe
Confidence            6665  466666543222222 2344444555454432   222    4567778888888889999888876332 345


Q ss_pred             eEEEEEecCCCcchHHHHHHHhhcCceeccC
Q psy10669        251 HLILIDLRKNKLTGSKVELVLEEIAIACNKN  281 (337)
Q Consensus       251 h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~  281 (337)
                      -.+++++..   +..++.+.|.+.||.+.+-
T Consensus       367 ~f~~~~l~~---~~~~~~~~l~~~gV~v~pg  394 (431)
T PRK15481        367 LNLWLPLDT---DSQATALTLAKSGWLVREG  394 (431)
T ss_pred             EEEEEECCC---CHHHHHHHHHHCCcEEecC
Confidence            566788764   3566777788889999873

>PRK13360 omega amino acid--pyruvate transaminase; Provisional

Probab=97.90  E-value=0.00017  Score=72.34  Aligned_cols=157  Identities=16%  Similarity=0.112  Sum_probs=90.0

Q ss_pred             cEEEEcCcccccccC-------hHHHHHHhhhcCCeEEEecccc-ccccc--------ee----eeecc--------CCc
Q psy10669        125 DFLSSGTTCYSRCLD-------YARFRQICDETDSIMFADMSHI-SGLIA--------GV----KGVTK--------TGE  176 (337)
Q Consensus       125 klII~~~S~~~~~~d-------~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g~----~~T~~--------~Gg  176 (337)
                      ..||+. ..+++.++       ++.|+++|+++|++||+|+.|+ .|-.+        ++    ...+|        -|+
T Consensus       217 aavivE-pi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDivt~gK~l~gG~~P~ga  295 (442)
T PRK13360        217 AAVIVE-PVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGVTPDLLTCAKGLTNGAIPMGA  295 (442)
T ss_pred             EEEEEc-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCceeeeeeccccCccceEE
Confidence            466665 47766444       5568899999999999999994 55444        11    11112        233


Q ss_pred             hhhh-hHHHHHhhc-------cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC-CEEe---
Q psy10669        177 KILY-DYEEKINNA-------VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG-YHVV---  244 (337)
Q Consensus       177 ~i~~-~l~~~i~~~-------~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G-~~v~---  244 (337)
                      ++.. ++.+.+...       ..+++++ .|+...|+..+++..+.+ +  ...+++.++.++|.+.|++.+ +..+   
T Consensus       296 v~~~~~i~~~~~~~~~~~~~~~~~~T~~-g~pl~~aaa~a~L~~l~~-~--~l~~~~~~~g~~l~~~l~~l~~~~~v~~v  371 (442)
T PRK13360        296 VFVSSEIHDAFMQGPEAGIEFFHGYTYS-GHPLACAAALATLDLYER-E--GLLTRAARLAPYWEDALHSLRDAPHVIDI  371 (442)
T ss_pred             EEEcHHHHHHhhcCCccccccccCCCCC-CCHHHHHHHHHHHHHHHh-C--CHHHHHHHHHHHHHHHHHHhhcCCCeeee
Confidence            3333 454443321       1233454 477777777777766643 2  478899999999999998742 3221   


Q ss_pred             -cCCCCCeEEEEEecC--CC--cchHHHHHHHhhcCceeccCc-ccchhhh
Q psy10669        245 -TGGTDVHLILIDLRK--NK--LTGSKVELVLEEIAIACNKNT-GISLAAE  289 (337)
Q Consensus       245 -~~~t~~h~v~V~~~~--~~--~~~~~~~~~L~~~gI~v~~~~-girig~~  289 (337)
                       +-|.   +.-+.+..  .+  -....+...|.+.||.+.... -+||.-+
T Consensus       372 rG~Gl---~~~~~l~~~~~~~~~~~~~~~~~l~~~Gvl~~~~~~~lr~~Pp  419 (442)
T PRK13360        372 RNLGL---VGAVELAPRDGKPGKRAYEVFLKCFEKGLMIRYTGDILALSPP  419 (442)
T ss_pred             eccce---EEEEEEecCCCCcchhHHHHHHHHHHCCcEEEecCCEEEEeCC
Confidence             1111   11122221  11  123456667777899986533 4777533

>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes

Probab=97.90  E-value=6.2e-05  Score=63.55  Aligned_cols=82  Identities=16%  Similarity=0.148  Sum_probs=60.0

Q ss_pred             HHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc---------------------------------------c--
Q psy10669         82 QQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT---------------------------------------N--  120 (337)
Q Consensus        82 ~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~---------------------------------------~--  120 (337)
                      +++++++|+.+.. | + +..++|+.|+..++.++.++                                       .  
T Consensus         6 ~~~l~~~~~~~~~-~-~-~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~   82 (170)
T cd01494           6 EEKLARLLQPGND-K-A-VFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAAELAGAKPVPVPVDDAGYGGLDVA   82 (170)
T ss_pred             HHHHHHHcCCCCC-c-E-EEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehhhHHHhcCCEEEEeccCCCCccchhhh
Confidence            4688999953321 2 2 33347789998888998642                                       0  


Q ss_pred             c----c---cccEEEEcCcccc--cccChHHHHHHhhhcCCeEEEeccccccccc
Q psy10669        121 N----A---RFDFLSSGTTCYS--RCLDYARFRQICDETDSIMFADMSHISGLIA  166 (337)
Q Consensus       121 ~----a---~pklII~~~S~~~--~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~  166 (337)
                      .    .   +|+++++.++.++  ...|.++|.++|+++|+++++|++|..+...
T Consensus        83 ~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~  137 (170)
T cd01494          83 ILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASP  137 (170)
T ss_pred             hhhhccccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEeccccccccc
Confidence            1    1   2788888766553  5667899999999999999999999987776

PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis

>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase

Probab=97.89  E-value=0.0046  Score=60.91  Aligned_cols=155  Identities=11%  Similarity=0.067  Sum_probs=82.7

Q ss_pred             ccEEEEcCccc--ccccCh---HHHHHHhhhcCCeEEEeccccc----c-c-cc----------ee-eeec-c-------
Q psy10669        124 FDFLSSGTTCY--SRCLDY---ARFRQICDETDSIMFADMSHIS----G-L-IA----------GV-KGVT-K-------  173 (337)
Q Consensus       124 pklII~~~S~~--~~~~d~---~~l~eia~~~ga~l~vD~AH~~----G-l-i~----------g~-~~T~-~-------  173 (337)
                      +|+|++..-.+  +...+.   ++|.++|+++|+++++|+++.-    + . ..          .+ ++|. |       
T Consensus       174 ~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGl  253 (402)
T TIGR03542       174 IDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGV  253 (402)
T ss_pred             ceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCccccCCCCc
Confidence            46666642223  466664   4566778899999999999752    1 1 10          01 2222 2       


Q ss_pred             CCchhhh--hHH--------HHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEE
Q psy10669        174 TGEKILY--DYE--------EKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHV  243 (337)
Q Consensus       174 ~Gg~i~~--~l~--------~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v  243 (337)
                      +=|++++  ++.        +....... ....+++.....++...+..-.....++.++...++.+.+.+.|.+.|+++
T Consensus       254 RiG~~i~~~~l~~~~~~~~~~~~~~~~~-~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~  332 (402)
T TIGR03542       254 RLGWTVVPKELTYADGHSVIQDWERRQC-TKFNGASYPVQRAAEAAYAGEGLQPILEAISYYMENARILRKALEAAGFKV  332 (402)
T ss_pred             ceEEEEecHHHhhcchhhHHHHHHHHhh-hcccCCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHhcCcee
Confidence            1255554  343        22211111 112223333333322322210001233455667788888999999988887


Q ss_pred             ecCCCCCeEEEEEecCCCcchHHHHHH-HhhcCceeccC
Q psy10669        244 VTGGTDVHLILIDLRKNKLTGSKVELV-LEEIAIACNKN  281 (337)
Q Consensus       244 ~~~~t~~h~v~V~~~~~~~~~~~~~~~-L~~~gI~v~~~  281 (337)
                      ..+ ....-+++.+.. .++..++.+. +++.||.+.+.
T Consensus       333 ~~~-~~~~f~~v~l~~-~~~~~~l~~~l~~~~gv~v~pg  369 (402)
T TIGR03542       333 YGG-EHAPYLWVKTPE-GISSWDFFDFLLYQYHVVGTPG  369 (402)
T ss_pred             cCC-CceeEEEEECCC-CCCHHHHHHHHHHhCCEEEeCc
Confidence            642 345566788764 3456565555 45689998864

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).

>PRK06425 histidinol-phosphate aminotransferase; Validated

Probab=97.88  E-value=0.0017  Score=62.28  Aligned_cols=184  Identities=13%  Similarity=0.066  Sum_probs=107.2

Q ss_pred             HHHHHhhcCCCCCCCcceeecCCCc-hhHHHHHHhhCCc------------------------------------c---c
Q psy10669         82 QQRSLKAFNLDPEQWGCNVQPYSGS-PANFAVCEKALPT------------------------------------N---N  121 (337)
Q Consensus        82 ~~~~a~lfg~~~~~~~~~v~~~Sgt-~AN~~v~~aLl~~------------------------------------~---~  121 (337)
                      ++.+++++|.+.    .+|..++|+ ++...++. ++++                                    +   .
T Consensus        46 r~~ia~~~~~~~----~~I~it~Gs~~~l~~~~~-~~~~~~vv~~~P~y~~y~~~~~~~G~~v~~vp~~~~~~~~~~l~~  120 (332)
T PRK06425         46 EDQIKIYTQGLK----IKVLIGPGLTHFIYRLLS-YINVGNIIIVEPNFNEYKGYAFTHGIRISALPFNLINNNPEILNN  120 (332)
T ss_pred             HHHHHHHhCCCc----ceEEECCCHHHHHHHHHH-HhCCCcEEEeCCChHHHHHHHHHcCCeEEEEeCCcccCcHHHHhh
Confidence            357889999886    368888895 56544444 4432                                    0   0


Q ss_pred             ccccEEEEc-Ccc-cccccChHHHH---HHhhhcCCeEEEeccccc----cc---cc--------eeeeec-c----CC-
Q psy10669        122 ARFDFLSSG-TTC-YSRCLDYARFR---QICDETDSIMFADMSHIS----GL---IA--------GVKGVT-K----TG-  175 (337)
Q Consensus       122 a~pklII~~-~S~-~~~~~d~~~l~---eia~~~ga~l~vD~AH~~----Gl---i~--------g~~~T~-~----~G-  175 (337)
                      .++|+|++. +.+ -+...+.+++.   ++|+++|+++++|++-.-    +.   ..        .+.+|. |    .| 
T Consensus       121 ~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~Gl  200 (332)
T PRK06425        121 YNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNRAEEDVLLNRSYGNVIIGRSLTKILGIPSL  200 (332)
T ss_pred             cCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhccccccchhHHHHhccCCCEEEEeecHHhcCCchh
Confidence            136777765 433 24777766655   557889999999998431    10   00        123343 2    12 


Q ss_pred             --chhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCe
Q psy10669        176 --EKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVH  251 (337)
Q Consensus       176 --g~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h  251 (337)
                        |++++  ++.+.+.....|..   ...+..+++. . ... ....+..++.+.++-+++.+.|.+.|+++... ++..
T Consensus       201 RiGy~v~~~~li~~l~~~~~~~~---~~~~~~~~l~-~-~~~-~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~-~~g~  273 (332)
T PRK06425        201 RIGYIATDDYNMKISRKITEPWS---VCDPAIDFIR-S-IDL-DYVAKHSLDIMENERSYLINNLEAMGFRAAGD-PSAN  273 (332)
T ss_pred             hheeeecCHHHHHHHHHcCCCCc---cCHHHHHHHH-H-hhh-HHHHHHHHHHHHHHHHHHHHHHHHCCCEECCC-CCce
Confidence              67665  57676665422321   1122221111 1 111 11124557777888888999999999887632 2333


Q ss_pred             EEEEEecCCCcchHHHHHHHhhcCceeccC
Q psy10669        252 LILIDLRKNKLTGSKVELVLEEIAIACNKN  281 (337)
Q Consensus       252 ~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~  281 (337)
                      -+++.+.    +..++.+.|.+.||.+.+-
T Consensus       274 f~~~~~~----~~~~~~~~l~~~gi~v~~~  299 (332)
T PRK06425        274 FITFMIP----DAHDFYSYLLKNGILVRLL  299 (332)
T ss_pred             EEEEEcC----CHHHHHHHHHHCCeEEEEC
Confidence            4666654    4567777887789998763

>PRK07392 threonine-phosphate decarboxylase; Validated

Probab=97.88  E-value=0.0026  Score=61.70  Aligned_cols=225  Identities=14%  Similarity=0.084  Sum_probs=127.4

Q ss_pred             cccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCc
Q psy10669         29 QINGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGS  106 (337)
Q Consensus        29 q~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt  106 (337)
                      ..+.|.|-..+|-.  +|.+.+++...+..  ..+|+.      .. ..++    ++.++++++.+.    -+|..++|+
T Consensus        21 ~~~~i~l~~~~n~~~~~~~~~~a~~~~~~~--~~~Y~~------~~-~~~L----r~aia~~~~v~~----~~I~it~G~   83 (360)
T PRK07392         21 PDAILDFSASINPLGPPESVIAAIQSALSA--LRHYPD------PD-YREL----RLALAQHHQLPP----EWILPGNGA   83 (360)
T ss_pred             cccEEEeCCcCCCCCCCHHHHHHHHHHHHH--hhcCCC------cC-HHHH----HHHHHHHhCcCh----hhEEECCCH
Confidence            33457777776754  78888888754332  112221      11 1222    456677888876    368888985


Q ss_pred             -hhHHHHHHhhCCc---------------------------------c-------cc-------cccEEEEc-Ccc-ccc
Q psy10669        107 -PANFAVCEKALPT---------------------------------N-------NA-------RFDFLSSG-TTC-YSR  136 (337)
Q Consensus       107 -~AN~~v~~aLl~~---------------------------------~-------~a-------~pklII~~-~S~-~~~  136 (337)
                       ++...++.++.+.                                 .       ..       +++++++. +.+ -+.
T Consensus        84 ~~~i~~~~~~l~~g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nP~NPTG~  163 (360)
T PRK07392         84 AELLTWAGRELAQLRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQLTPNDGLLLNNPHNPTGK  163 (360)
T ss_pred             HHHHHHHHHHhCCCCeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhccCCCEEEEeCCCCCCCC
Confidence             5665556666432                                 0       00       14666654 433 257


Q ss_pred             ccChHHHHHHhhhcCCeEEEeccccc----c----cc---c-----eeeeec-c-------CCchhhh--hHHHHHhhcc
Q psy10669        137 CLDYARFRQICDETDSIMFADMSHIS----G----LI---A-----GVKGVT-K-------TGEKILY--DYEEKINNAV  190 (337)
Q Consensus       137 ~~d~~~l~eia~~~ga~l~vD~AH~~----G----li---~-----g~~~T~-~-------~Gg~i~~--~l~~~i~~~~  190 (337)
                      ..+-++|.+++++++ ++++|+++.-    |    ++   .     .+.+|. |       +-|+++.  ++.+.+....
T Consensus       164 ~~~~~~l~~l~~~~~-~~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~~~~~~~~~~~~  242 (360)
T PRK07392        164 LWSREAILPLLEQFA-LVVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHPDRLQRWQQWR  242 (360)
T ss_pred             CcCHHHHHHHHHHCC-EEEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCCHHHHHHHHhhC
Confidence            788889999999988 5777998641    1    01   1     122232 2       2355554  4656565443


Q ss_pred             CCCCCCCCcHHHHHHHHHHHHHHhchhh-HHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCCCcchHHHH
Q psy10669        191 FPSLQGGPHNHAIGAIATAMLQAQSDEF-KSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKNKLTGSKVE  268 (337)
Q Consensus       191 ~p~~~g~~~~~~iaala~a~~e~~~~~~-~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~~~~~~~~~  268 (337)
                      .+   .+.+.....++..++..   ..+ +..++.+.++-+.+.+.|.+. |+.+..  +...-+++++..   +..++.
T Consensus       243 ~~---~~~s~~~q~~~~~~l~~---~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~--~~~~fl~~~~~~---~~~~l~  311 (360)
T PRK07392        243 DP---WPVNGLAAAAAIAALAD---RDFQQQTWAWLPPAREALFQGLASLPGLTPLP--SAANFLLVQSQG---SALQLQ  311 (360)
T ss_pred             CC---CCCCHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHHHHhCCCcEECC--CCCCEEEEEcCC---CHHHHH
Confidence            22   23344444444444432   223 233455667777788888774 887764  345556676643   445555


Q ss_pred             HH-HhhcCceeccCc
Q psy10669        269 LV-LEEIAIACNKNT  282 (337)
Q Consensus       269 ~~-L~~~gI~v~~~~  282 (337)
                      .. |+++||.+.+-.
T Consensus       312 ~~ll~~~gv~v~pg~  326 (360)
T PRK07392        312 EKLLQQHRILIRDCL  326 (360)
T ss_pred             HHHHhhCCEEEEeCC
Confidence            55 577899987643

>PTZ00433 tyrosine aminotransferase; Provisional

Probab=97.87  E-value=0.0018  Score=64.03  Aligned_cols=155  Identities=15%  Similarity=0.190  Sum_probs=83.9

Q ss_pred             ccEEEEcCccc--ccccC---hHHHHHHhhhcCCeEEEecccccccc-c----------------eeeeec-c-------
Q psy10669        124 FDFLSSGTTCY--SRCLD---YARFRQICDETDSIMFADMSHISGLI-A----------------GVKGVT-K-------  173 (337)
Q Consensus       124 pklII~~~S~~--~~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli-~----------------g~~~T~-~-------  173 (337)
                      +++|++..-++  +...+   +++|.++|+++|+++++|+++. .+. .                .+.++. |       
T Consensus       178 ~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGl  256 (412)
T PTZ00433        178 TKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYA-GMVFNGATFTSVADFDTTVPRVILGGTAKNLVVPGW  256 (412)
T ss_pred             ceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEecccc-ccccCCCCccchhhccCCCceEEEccchhhcCCCCe
Confidence            57777643333  34444   5556778899999999999985 221 0                112222 2       


Q ss_pred             CCchhhh--------hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-CCCEEe
Q psy10669        174 TGEKILY--------DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-RGYHVV  244 (337)
Q Consensus       174 ~Gg~i~~--------~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~G~~v~  244 (337)
                      +-|+++.        ++.+.+.....+ .. +.+.....++..++.+-.+...++.++++.++-+.+.+.|.+ .|+.+.
T Consensus       257 RlG~~i~~~p~~~~~~~~~~~~~~~~~-~~-~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~  334 (412)
T PTZ00433        257 RLGWLLLVDPHGNGGDFLDGMKRLGML-VC-GPCSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGECIGLSPT  334 (412)
T ss_pred             eEEEEEEeCCcccHHHHHHHHHHHhhc-cC-CCChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCccc
Confidence            1255542        244444432221 12 334444444444443311123356677788888888888887 477654


Q ss_pred             cCCCCCeEEEEEecCC---Cc-chHHHHHHH-hhcCceeccCc
Q psy10669        245 TGGTDVHLILIDLRKN---KL-TGSKVELVL-EEIAIACNKNT  282 (337)
Q Consensus       245 ~~~t~~h~v~V~~~~~---~~-~~~~~~~~L-~~~gI~v~~~~  282 (337)
                      .. ...-.+++.+...   +. +..++.+.| ++.||.+.+..
T Consensus       335 ~p-~gg~f~~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~  376 (412)
T PTZ00433        335 MP-RGSMFLMSRLDLEKFRDIKSDVEFYEKLLEEENVQVLPGE  376 (412)
T ss_pred             CC-CeeEEEEEEechhhcCCCCCHHHHHHHHHHhcCEEEeCcc
Confidence            32 2244556666432   11 345555555 56899987643

>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase

Probab=97.86  E-value=0.00018  Score=72.72  Aligned_cols=110  Identities=13%  Similarity=0.040  Sum_probs=68.3

Q ss_pred             cEEEEcCcccccccChH-------HHHHHhhhcCCeEEEeccccccccce---------e---eee-cc-------CCch
Q psy10669        125 DFLSSGTTCYSRCLDYA-------RFRQICDETDSIMFADMSHISGLIAG---------V---KGV-TK-------TGEK  177 (337)
Q Consensus       125 klII~~~S~~~~~~d~~-------~l~eia~~~ga~l~vD~AH~~Gli~g---------~---~~T-~~-------~Gg~  177 (337)
                      ..||+. ..+++.+++.       .|+++|+++|++||+|+.| .|+-.+         +   ..| +|       -|++
T Consensus       248 AavI~E-pv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~-tGfR~g~~ga~~~~gv~PDi~t~gK~lggG~Pigav  325 (474)
T PLN02482        248 AAVILE-PVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVM-TGFRIAYGGAQEYFGITPDLTTLGKVIGGGLPVGAY  325 (474)
T ss_pred             EEEEEC-CCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccc-cCeecCcchHhHHhCCCCCEEEecchhhCCCceEEE
Confidence            456664 5777665543       4889999999999999999 576332         1   012 22       2344


Q ss_pred             hhh-hHHHHHhhccCCCCCCC--CcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC
Q psy10669        178 ILY-DYEEKINNAVFPSLQGG--PHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR  239 (337)
Q Consensus       178 i~~-~l~~~i~~~~~p~~~g~--~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~  239 (337)
                      +.. ++.+.+.+.-.....+|  .++..+|+...++..+.+   ++..+++.++.++|+++|.+.
T Consensus       326 ~g~~ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~~---~~~~~~~~~~g~~l~~~L~~l  387 (474)
T PLN02482        326 GGRREIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQ---PGTYEYLDKITKKLIQGILEA  387 (474)
T ss_pred             EEcHHHHHhhccCCCcccccCcchhHHHHHHHHHHHHHHhc---cCHHHHHHHHHHHHHHHHHHH
Confidence            222 56665543211112233  566677775555655533   357889999999999999874

>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional

Probab=97.86  E-value=0.0002  Score=71.60  Aligned_cols=156  Identities=13%  Similarity=0.140  Sum_probs=86.6

Q ss_pred             ccEEEEcCcccccccC---hHHHHHHhhhcCCeEEEeccccccccce---------e---eee-cc--CCchh----hh-
Q psy10669        124 FDFLSSGTTCYSRCLD---YARFRQICDETDSIMFADMSHISGLIAG---------V---KGV-TK--TGEKI----LY-  180 (337)
Q Consensus       124 pklII~~~S~~~~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~g---------~---~~T-~~--~Gg~i----~~-  180 (337)
                      ...||+ +++++++.|   ++.|+++|+++|++||+|+.| +|+-..         +   ..| +|  .||+-    ++ 
T Consensus       188 ~aavi~-Epv~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~-tG~~~~~~g~~~~~gv~PDi~t~gK~lggG~p~~av~~~  265 (431)
T PRK06209        188 IACVIL-EPATADEPQDGFLHEVRRLCHENGALFILDEMI-TGFRWHMRGAQKLYGIVPDLSCFGKALGNGFAVSALAGK  265 (431)
T ss_pred             EEEEEE-ccccCCCCCHHHHHHHHHHHHHcCCEEEEEccc-ccCCcCcchhhHHhCCCcceeeehhhhcCCcccEEEEEH
Confidence            346666 567777554   667889999999999999999 676331         0   012 12  13332    22 


Q ss_pred             -hHHHH--Hhh--ccCCCC---CCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh----CCCEE--ecC
Q psy10669        181 -DYEEK--INN--AVFPSL---QGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK----RGYHV--VTG  246 (337)
Q Consensus       181 -~l~~~--i~~--~~~p~~---~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~----~G~~v--~~~  246 (337)
                       ++.+.  +..  .-.+++   +-++|+..+|+..+++..+.+ +  ...+++.++.++|++.|++    .++..  -+.
T Consensus       266 ~~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~-~--~~~~~~~~~g~~l~~~L~~~~~~~~~~~~vr~~  342 (431)
T PRK06209        266 REYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRD-E--DVIERLHEQGAKLAAGVNEAAAEHGLQDHVRVS  342 (431)
T ss_pred             HHHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhc-c--CHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEee
Confidence             34443  210  001111   223566677777777776643 2  4788999999999999876    34432  111


Q ss_pred             CCCCeEEEEEecCCCcchH----HHHHHHhhcCceeccCcccchh
Q psy10669        247 GTDVHLILIDLRKNKLTGS----KVELVLEEIAIACNKNTGISLA  287 (337)
Q Consensus       247 ~t~~h~v~V~~~~~~~~~~----~~~~~L~~~gI~v~~~~girig  287 (337)
                      ++...+.++.....+....    .+.+.|.+.||.+.   .++|+
T Consensus       343 G~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~p---~l~is  384 (431)
T PRK06209        343 GRPCCLTYSTLDGNGQPSQAFRTLFLQETIRRGVLMP---SLVVS  384 (431)
T ss_pred             cceEEEEEecCCcccCCcHHHHHHHHHHHHHCCcccc---ccccc
Confidence            2333333332222111111    34455667799875   35554

>PRK03967 histidinol-phosphate aminotransferase; Provisional

Probab=97.85  E-value=0.0032  Score=60.63  Aligned_cols=223  Identities=13%  Similarity=0.041  Sum_probs=125.5

Q ss_pred             cceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCc-h
Q psy10669         31 NGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGS-P  107 (337)
Q Consensus        31 ~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt-~  107 (337)
                      ..|.|--.+|..  +|.+.+++.+.+......+||-.    |   ..++    |+.+++++|.+.    -+|.+++|+ +
T Consensus        19 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~----g---~~~l----r~~ia~~~~~~~----~~I~~t~G~~~   83 (337)
T PRK03967         19 YRIWLDKNENPFDLPEELKEEIFEELKRVPFNRYPHI----T---SDPL----REAIAEFYGLDA----ENIAVGNGSDE   83 (337)
T ss_pred             ceEEecCCCCCCCCCHHHHHHHHHHhhcCccccCCCC----C---HHHH----HHHHHHHhCcCc----ceEEEcCCHHH
Confidence            345665566664  68898888765432111122211    1   2233    457788999876    368888995 5


Q ss_pred             hHHHHHHhhCCc---------------------------------------cc--ccccEEEEc-Ccc-cccccChHHHH
Q psy10669        108 ANFAVCEKALPT---------------------------------------NN--ARFDFLSSG-TTC-YSRCLDYARFR  144 (337)
Q Consensus       108 AN~~v~~aLl~~---------------------------------------~~--a~pklII~~-~S~-~~~~~d~~~l~  144 (337)
                      +...++.++-.+                                       +.  .++|++++. +.+ .+...+.++|.
T Consensus        84 ~l~~~~~~~~gd~V~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~v~~~~P~NPtG~~~~~~~l~  163 (337)
T PRK03967         84 LISYLVKLFEGKHIVITPPTFGMYSFYAKLNGIPVIDVPLKEDFTIDGERIAEKAKNASAVFICSPNNPTGNLQPEEEIL  163 (337)
T ss_pred             HHHHHHHHhCCCeEEEeCCChHHHHHHHHHcCCeEEEeecCCCCCcCHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHH
Confidence            655555544211                                       00  124666554 423 35888889999


Q ss_pred             HHhhhcCCeEEEeccccccccc-------------eeeeec-c-------CCchhhh--hHHHHHhhccCCCCCCCCcHH
Q psy10669        145 QICDETDSIMFADMSHISGLIA-------------GVKGVT-K-------TGEKILY--DYEEKINNAVFPSLQGGPHNH  201 (337)
Q Consensus       145 eia~~~ga~l~vD~AH~~Gli~-------------g~~~T~-~-------~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~  201 (337)
                      ++++ +|+++++|+++.- +..             .+..|. |       +-|+++.  ++.+.+.....+.   +.+.+
T Consensus       164 ~i~~-~~~~ii~De~y~~-~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~~~i~~~~~~~~~~---~~~~~  238 (337)
T PRK03967        164 KVLE-TGKPVVLDEAYAE-FSGKSLIGLIDEYPNLILLRTFSKAFGLAGIRAGYAIANEEIIDALYRIKPPF---SLNIL  238 (337)
T ss_pred             HHHh-cCCEEEEECchhh-hcccchHHHHhhCCCEEEEecchHhhcchhhhheeeecCHHHHHHHHhhcCCC---CCCHH
Confidence            9995 6999999999851 111             122232 2       2367665  5666666543332   33444


Q ss_pred             HHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccC
Q psy10669        202 AIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKN  281 (337)
Q Consensus       202 ~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~  281 (337)
                      ...++..++..-  ..+.+.++.+.++-+.+.+.|.+.++   .  +.+.-+++.+.        +.+.|.+.||.++..
T Consensus       239 ~q~~~~~~l~~~--~~~~~~~~~~~~~r~~l~~~L~~~~~---~--~~~~~~~~~~~--------~~~~l~~~gi~v~~~  303 (337)
T PRK03967        239 TMKIVRLALDHY--DLIEERIDYIIKERERVRRELGEYAY---P--SDANFLLLKLD--------AYDYLLENGIVVRKL  303 (337)
T ss_pred             HHHHHHHHHhCH--HHHHHHHHHHHHHHHHHHHHhccCcC---C--CCCcEEEEhHH--------HHHHHHHCCEEEEeC
Confidence            444444444321  23345556667777788888876532   1  23334556542        456666779998643


Q ss_pred             c-----ccchhh
Q psy10669        282 T-----GISLAA  288 (337)
Q Consensus       282 ~-----girig~  288 (337)
                      .     .+||+.
T Consensus       304 ~~~~~~~~Ri~~  315 (337)
T PRK03967        304 SGRLEGHIRVTV  315 (337)
T ss_pred             CCCCCCeEEEec
Confidence            2     467653

>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]

Probab=97.85  E-value=0.00078  Score=64.73  Aligned_cols=135  Identities=21%  Similarity=0.291  Sum_probs=91.8

Q ss_pred             hHHHHHHhhhcCCeEEEecccccc---ccc-----------------------eeeeecc------CCchhhh------h
Q psy10669        140 YARFRQICDETDSIMFADMSHISG---LIA-----------------------GVKGVTK------TGEKILY------D  181 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~~G---li~-----------------------g~~~T~~------~Gg~i~~------~  181 (337)
                      .+..++||++|++.++.|++-.+=   +|-                       |++.+.|      .|||+.-      |
T Consensus       208 ~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~lvnmGGfl~~~D~~~fD  287 (471)
T COG3033         208 MKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDGLVNMGGFLCFKDDSFFD  287 (471)
T ss_pred             HHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhheeeccccceeccccEEEecCccHHH
Confidence            445668999999999999997651   111                       2233333      3888853      2


Q ss_pred             HHHHH-----hhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEE
Q psy10669        182 YEEKI-----NNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILID  256 (337)
Q Consensus       182 l~~~i-----~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~  256 (337)
                      +-...     -..-||. +|+..--.+.++|+++.|..+   ..|.++-++..++|++.|.+.|..|+- ..-.|-+.||
T Consensus       288 vy~~~~~~~V~~eG~~t-YGgl~GrdmealAvGL~e~~~---~~yl~~Rv~Qv~YL~~~l~~~GVpi~~-paGGHavfvd  362 (471)
T COG3033         288 VYEECRTLVVVQEGFPT-YGGLAGRDMEALAVGLREGVN---FDYLAHRVAQVQYLADGLEEAGVPIVQ-PAGGHAVFVD  362 (471)
T ss_pred             HHHHHHhheEeeccccc-cCcccchhHHHHHHHHHHhcC---cHHHHHHHHHHHHHHHHHHhcCCeeEe-cCCCceEEee
Confidence            32211     1223543 667777899999999999875   355666678899999999999998774 3567888888


Q ss_pred             ecC-------CCcchHHHHHHHh-hcCceec
Q psy10669        257 LRK-------NKLTGSKVELVLE-EIAIACN  279 (337)
Q Consensus       257 ~~~-------~~~~~~~~~~~L~-~~gI~v~  279 (337)
                      .+.       +.+.++.++-.|. ++||.+-
T Consensus       363 a~~~lphip~eqFpaqala~ely~e~GiRav  393 (471)
T COG3033         363 AGKFLPHIPAEQFPAQALACELYKEAGIRAV  393 (471)
T ss_pred             hhhhcCCCChhhCcHHHHHHHHHHHhCeeee
Confidence            643       4455665555555 4798864

>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase

Probab=97.85  E-value=0.0003  Score=71.96  Aligned_cols=127  Identities=16%  Similarity=0.169  Sum_probs=84.5

Q ss_pred             CcccccccChHHHHHHhhhcCCeEEEeccccccccc---------e------eee-ecc-----CC-chhh-h--hHHHH
Q psy10669        131 TTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA---------G------VKG-VTK-----TG-EKIL-Y--DYEEK  185 (337)
Q Consensus       131 ~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~---------g------~~~-T~~-----~G-g~i~-~--~l~~~  185 (337)
                      .+..+...|+++|.++|+++|++++||+||+.+.+.         |      ++. .||     +| |+++ .  ++.+.
T Consensus       275 tt~tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P~g~G~llvr~~~~~~~  354 (522)
T TIGR03799       275 TTETGNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVPMGAGMVLFKDPALMSA  354 (522)
T ss_pred             CcCCCCcCCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcCcccEEEEEeCHHHHHH
Confidence            345789999999999999999999999999977653         2      222 232     23 4443 2  23222


Q ss_pred             Hhhc---cC---------CCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-CCCEEecCCCCCeE
Q psy10669        186 INNA---VF---------PSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-RGYHVVTGGTDVHL  252 (337)
Q Consensus       186 i~~~---~~---------p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~G~~v~~~~t~~h~  252 (337)
                      +...   ++         ..+.+|-.... ..+..+++.+....++++.++.++++++|++.|.+ .+|++++. .+-++
T Consensus       355 ~~~~~~Yl~~~~~~d~~~~~legsR~~~a-l~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~~~~el~~~-p~l~i  432 (522)
T TIGR03799       355 IEHHAEYILRKGSKDLGSHTLEGSRPGMA-MLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQPDFELVTE-PELCL  432 (522)
T ss_pred             hccCcchhcCCCCCccccceeecCcchHH-HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEecC-CCccE
Confidence            2210   00         12345544444 35778888887788899999999999999999987 59999863 33444


Q ss_pred             EEEEecC
Q psy10669        253 ILIDLRK  259 (337)
Q Consensus       253 v~V~~~~  259 (337)
                      +...+.+
T Consensus       433 v~Fr~~p  439 (522)
T TIGR03799       433 LTYRYVP  439 (522)
T ss_pred             EEEEEeC
Confidence            4444333

This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).

>PRK06105 aminotransferase; Provisional

Probab=97.83  E-value=0.0013  Score=66.36  Aligned_cols=147  Identities=10%  Similarity=0.148  Sum_probs=80.5

Q ss_pred             hHHHHHHhhhcCCeEEEeccc-cccccc--------ee----eeecc--CCch------hhh-hHHHHHhhcc-------
Q psy10669        140 YARFRQICDETDSIMFADMSH-ISGLIA--------GV----KGVTK--TGEK------ILY-DYEEKINNAV-------  190 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH-~~Gli~--------g~----~~T~~--~Gg~------i~~-~l~~~i~~~~-------  190 (337)
                      ++.++++|+++|++||+|+.| +.|-.+        ++    ...+|  .||+      +.. ++.+.+.+..       
T Consensus       241 l~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v~PDi~~~gK~lggG~~P~~av~~~~~i~~~~~~~~~~~~~~~  320 (460)
T PRK06105        241 WEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGIKPDILVMSKQLSSSYQPLSAVLMNEKVYDPIADESGKIGTFG  320 (460)
T ss_pred             HHHHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCCCCCeeeeecccccCcccceEEEEcHHHHHHHhcccccCcccc
Confidence            667889999999999999999 467665        11    11122  1343      222 4555444211       


Q ss_pred             CCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecC-CCCCeEEEEEecCCC-----c-
Q psy10669        191 FPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTG-GTDVHLILIDLRKNK-----L-  262 (337)
Q Consensus       191 ~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~-~t~~h~v~V~~~~~~-----~-  262 (337)
                      +.+++ +.|+-..|+...++..+.+   ++..+++.+..++|.+.|++. .+.++.. -.-.-+.-|.+....     . 
T Consensus       321 h~~T~-~gnpl~~aaa~a~L~~i~~---~~l~~~v~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~  396 (460)
T PRK06105        321 HGFTA-SGHPVAAAVALENLAIIEE---RDLVGNAAERGARLQARLRALADHPLVGEVRGVGLIAAVELVADKATKTPFE  396 (460)
T ss_pred             cCCCC-CCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEEEEEEecCcccCCCCC
Confidence            11222 3455555555555666543   367889999999999998873 2222210 001122233332111     0 


Q ss_pred             ----chHHHHHHHhhcCceeccC-cccchhhhh
Q psy10669        263 ----TGSKVELVLEEIAIACNKN-TGISLAAEI  290 (337)
Q Consensus       263 ----~~~~~~~~L~~~gI~v~~~-~girig~~~  290 (337)
                          ....+...|.+.||.+.+. .-+||.-+.
T Consensus       397 ~~~~~a~~i~~~~~~~Gvl~~~~g~~i~l~Ppl  429 (460)
T PRK06105        397 PPGKVGARANAAAHEHGVISRAMGDTLAFCPPL  429 (460)
T ss_pred             chhHHHHHHHHHHHHCCeEEEecCCEEEEECCC
Confidence                1234555666789999763 246665443

>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional

Probab=97.83  E-value=0.0022  Score=63.55  Aligned_cols=156  Identities=12%  Similarity=0.099  Sum_probs=84.2

Q ss_pred             cEEEEcCcc-cccccChHH---HHHHhhhcCCeEEEeccccc----cc--cc----------eeeeec-c-------CCc
Q psy10669        125 DFLSSGTTC-YSRCLDYAR---FRQICDETDSIMFADMSHIS----GL--IA----------GVKGVT-K-------TGE  176 (337)
Q Consensus       125 klII~~~S~-~~~~~d~~~---l~eia~~~ga~l~vD~AH~~----Gl--i~----------g~~~T~-~-------~Gg  176 (337)
                      .++++++++ .+...+.++   |.++|+++++++++|+++.-    |-  ..          .+.+|. |       +-|
T Consensus       173 ~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRvG  252 (409)
T PLN00143        173 AMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGWGLG  252 (409)
T ss_pred             EEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcccCcEEEEccchhhcCCCccceE
Confidence            456666654 247777554   55778999999999999752    21  11          112222 2       235


Q ss_pred             hhhh-h---H------HHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEE-ec
Q psy10669        177 KILY-D---Y------EEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHV-VT  245 (337)
Q Consensus       177 ~i~~-~---l------~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v-~~  245 (337)
                      +++. +   +      .+.+.....+...  ++.+..++++.++..-....+++.++++.++-+.+.+.|.+.+... ..
T Consensus       253 ~~v~~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~  330 (409)
T PLN00143        253 WLVTCDPSGLLQICEIADSIKKALNPAPF--PPTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEIPCIMCPQ  330 (409)
T ss_pred             EEEeeCchhhhhhHHHHHHHHHHHhccCC--CCchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence            5543 1   2      2233322222212  2334444444444321112456777888888888888888764322 11


Q ss_pred             CCCCCeEEEEEecCC---Cc-ch-HHHHHHHhhcCceeccCc
Q psy10669        246 GGTDVHLILIDLRKN---KL-TG-SKVELVLEEIAIACNKNT  282 (337)
Q Consensus       246 ~~t~~h~v~V~~~~~---~~-~~-~~~~~~L~~~gI~v~~~~  282 (337)
                      .....-.+++++...   +. +. ..+.+.|.+.||.+.+-.
T Consensus       331 ~p~gg~f~w~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~  372 (409)
T PLN00143        331 KAEGAFFALVKLNLLLLEDIEDDMEFCLKLAKEESLIILPGV  372 (409)
T ss_pred             CCCeeEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEeCcc
Confidence            122355677888642   22 23 344466678899998743

>PRK09265 aminotransferase AlaT; Validated

Probab=97.81  E-value=0.012  Score=58.02  Aligned_cols=152  Identities=13%  Similarity=0.025  Sum_probs=81.4

Q ss_pred             ccEEEEc-Ccc-cccccC---hHHHHHHhhhcCCeEEEeccccc----c--------ccc---e-eeeec-c-------C
Q psy10669        124 FDFLSSG-TTC-YSRCLD---YARFRQICDETDSIMFADMSHIS----G--------LIA---G-VKGVT-K-------T  174 (337)
Q Consensus       124 pklII~~-~S~-~~~~~d---~~~l~eia~~~ga~l~vD~AH~~----G--------li~---g-~~~T~-~-------~  174 (337)
                      +++|++. +++ .+...|   +++|.++|+++|+++++|+++.-    |        +..   . +.++. |       +
T Consensus       169 ~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlR  248 (404)
T PRK09265        169 TKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFR  248 (404)
T ss_pred             ceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchhhccCcccc
Confidence            5665554 443 246777   66777889999999999998641    1        000   0 11222 2       2


Q ss_pred             Cchhhh----h----HHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHH---HHHHHHHHHHHHHHHHhC-CCE
Q psy10669        175 GEKILY----D----YEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSY---QAQVKANASHLSDEMIKR-GYH  242 (337)
Q Consensus       175 Gg~i~~----~----l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y---~~~v~~na~~l~~~L~~~-G~~  242 (337)
                      -|+++.    +    +.+.+... .. ...+++.+...+...++...  ..++++   .+++.++.+.+.+.|.+. |++
T Consensus       249 iG~~v~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~q~~~~~~l~~~--~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~  324 (404)
T PRK09265        249 VGWMVLSGPKKHAKGYIEGLDML-AS-MRLCANVPAQHAIQTALGGY--QSINELILPGGRLYEQRDRAWELLNAIPGVS  324 (404)
T ss_pred             eEEEEEeCchHHHHHHHHHHHHH-hc-cccCCCcHHHHHHHHHhcCc--hhHHHHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence            255542    1    22222211 11 11133344444444444221  112222   246677777888888775 776


Q ss_pred             EecCCCCCeEEEEEecCCC----cchHHHHHHHhhcCceecc
Q psy10669        243 VVTGGTDVHLILIDLRKNK----LTGSKVELVLEEIAIACNK  280 (337)
Q Consensus       243 v~~~~t~~h~v~V~~~~~~----~~~~~~~~~L~~~gI~v~~  280 (337)
                      +... ..+-.+++.+....    -+...+.+.|.+.||.+.+
T Consensus       325 ~~~p-~~g~~l~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~p  365 (404)
T PRK09265        325 CVKP-KGALYAFPKLDPKVYPIHDDEQFVLDLLLQEKVLLVQ  365 (404)
T ss_pred             ccCC-CcceEEEEEecccccCCCCHHHHHHHHHHhCCEEEEC
Confidence            5532 33556677775421    1344577888889999875

>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional

Probab=97.81  E-value=0.0019  Score=63.20  Aligned_cols=151  Identities=17%  Similarity=0.083  Sum_probs=76.2

Q ss_pred             ccEEEEcCcccc----cccC---hHHHHHHhhhcCCeEEEeccccccccce-------------eeeecc--CCchhhhh
Q psy10669        124 FDFLSSGTTCYS----RCLD---YARFRQICDETDSIMFADMSHISGLIAG-------------VKGVTK--TGEKILYD  181 (337)
Q Consensus       124 pklII~~~S~~~----~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~g-------------~~~T~~--~Gg~i~~~  181 (337)
                      +..||+.+ ..+    ...|   +++++++|+++|++||+|+.|+ |+-.|             +...+|  .||+=++-
T Consensus       163 ~aAvivEp-i~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~t-G~RtG~~~a~~~~gv~PDiv~~gK~lggG~P~~a  240 (364)
T PRK04013        163 TAAVIFEP-IQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQS-GLRTGKFLAIEHYKVEPDIVTMGKGIGNGVPVSL  240 (364)
T ss_pred             cEEEEEcC-CcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-cCCCCchhHHHhcCCCCCEEEecccccCCceeEE
Confidence            45667653 443    3555   7889999999999999999997 54222             111222  23432221


Q ss_pred             --HHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecC
Q psy10669        182 --YEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRK  259 (337)
Q Consensus       182 --l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~  259 (337)
                        ..+.+.......++ +.|+-..|+....+..+.+.+       +++|++.....+... + |..--...-++-|.+..
T Consensus       241 ~~~~~~~~~~~~~~T~-~gnp~~~aaa~a~l~~i~~~~-------l~~~~~~~l~~l~~~-~-v~~vRG~Gl~~gve~~~  310 (364)
T PRK04013        241 TLTNFDVERGKHGSTF-GGNPLACKAVAVTLRILRRER-------LVEKAGEKFIEIKGE-R-VVTTRGRGLMIGIVLKK  310 (364)
T ss_pred             EEecccccCCCcCCCC-CcCHHHHHHHHHHHHHHHhcc-------HHHHHHHHHHHhccC-c-ceeeeeCcEEEEEEeCC
Confidence              11122322222223 355566666656666664322       333333332333221 1 11100112344444532


Q ss_pred             CCcchHHHHHHHhhcCceeccCc--ccchhhh
Q psy10669        260 NKLTGSKVELVLEEIAIACNKNT--GISLAAE  289 (337)
Q Consensus       260 ~~~~~~~~~~~L~~~gI~v~~~~--girig~~  289 (337)
                         ....+.+.+.+.|+.+.+..  .||+.-|
T Consensus       311 ---~~~~i~~~~~~~Gll~~~~g~~vlr~~Pp  339 (364)
T PRK04013        311 ---PVGKYVEELQNRGYLVHTAGQRVIRLLPP  339 (364)
T ss_pred             ---cHHHHHHHHHhCCcEEeeCCCCEEEEeCC
Confidence               23456666777899997643  5777544

>PRK09221 beta alanine--pyruvate transaminase; Provisional

Probab=97.79  E-value=0.00081  Score=67.54  Aligned_cols=160  Identities=16%  Similarity=0.110  Sum_probs=88.4

Q ss_pred             cEEEEcCccccc---ccC----hHHHHHHhhhcCCeEEEecccc-ccccc--------ee----eeecc--CCch-----
Q psy10669        125 DFLSSGTTCYSR---CLD----YARFRQICDETDSIMFADMSHI-SGLIA--------GV----KGVTK--TGEK-----  177 (337)
Q Consensus       125 klII~~~S~~~~---~~d----~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g~----~~T~~--~Gg~-----  177 (337)
                      ..||+. ..+++   ..+    ++.++++|+++|++||+|+.|+ .|-.+        ++    ...+|  .||+     
T Consensus       220 Aavi~E-pv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~~~~~~gv~PDi~~~gK~l~gG~~Pi~a  298 (445)
T PRK09221        220 AAVIVE-PMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAFAAERFGVTPDIITFAKGLTNGAIPMGA  298 (445)
T ss_pred             EEEEEe-cccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchhhHHHhcCCCCCEEEeccccccCccccee
Confidence            466665 36544   344    6678899999999999999995 44323        11    11222  1342     


Q ss_pred             -hhh-hHHHHHhhc-------cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecC-
Q psy10669        178 -ILY-DYEEKINNA-------VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTG-  246 (337)
Q Consensus       178 -i~~-~l~~~i~~~-------~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~-  246 (337)
                       +.. ++.+.+...       ..+.+++ .|+...++...+++.+.+   +...+++.++.++|++.|++. ++..+.. 
T Consensus       299 v~~~~~i~~~~~~~~~~~~~~~~~~T~~-~~pl~~aaa~a~L~~i~~---~~l~~~~~~~g~~l~~~l~~l~~~~~v~~v  374 (445)
T PRK09221        299 VIASDEIYDAFMQGPEYAIEFFHGYTYS-AHPVACAAGLATLDIYRE---EDLFERAAELAPYFEDAVHSLKGLPHVIDI  374 (445)
T ss_pred             eEEcHHHHHhhccCcccccccccccCCC-cCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHhhccCCCEEEE
Confidence             222 454444321       1233454 455556555555655533   256889999999999988874 3332210 


Q ss_pred             CCCCeEEEEEecCC----CcchHHHHHHHhhcCceeccCc-ccchhhh
Q psy10669        247 GTDVHLILIDLRKN----KLTGSKVELVLEEIAIACNKNT-GISLAAE  289 (337)
Q Consensus       247 ~t~~h~v~V~~~~~----~~~~~~~~~~L~~~gI~v~~~~-girig~~  289 (337)
                      -...-+.-|.+...    ......+.+.|.+.||.+.... .|||.-+
T Consensus       375 rg~Gl~~~v~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~~~~lr~~Pp  422 (445)
T PRK09221        375 RNIGLVAGIELAPRPGAPGARGYEAFMKCFEKGLLVRYTGDTIALSPP  422 (445)
T ss_pred             ecCceEEEEEEecccccccchHHHHHHHHHHCCeEEeecCCEEEEECC
Confidence            00111222333221    1123456677777899986532 5777533

>PLN02376 1-aminocyclopropane-1-carboxylate synthase

Probab=97.75  E-value=0.0018  Score=65.98  Aligned_cols=158  Identities=9%  Similarity=0.093  Sum_probs=85.5

Q ss_pred             ccEEE-EcCcc-cccccChHHHH---HHhhhcCCeEEEeccccccccc------------------------eeeeec-c
Q psy10669        124 FDFLS-SGTTC-YSRCLDYARFR---QICDETDSIMFADMSHISGLIA------------------------GVKGVT-K  173 (337)
Q Consensus       124 pklII-~~~S~-~~~~~d~~~l~---eia~~~ga~l~vD~AH~~Gli~------------------------g~~~T~-~  173 (337)
                      +|+|+ +++++ .+...+.+++.   ++|+++|++|++|+++..=+..                        .+..|. |
T Consensus       200 ~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK  279 (496)
T PLN02376        200 VKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSK  279 (496)
T ss_pred             eeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEEeccc
Confidence            57455 44544 35777777655   6788999999999998642111                        012222 2


Q ss_pred             -------CCchhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhh-HHH----HHHHHHHHHHHHHHHHh
Q psy10669        174 -------TGEKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEF-KSY----QAQVKANASHLSDEMIK  238 (337)
Q Consensus       174 -------~Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~-~~y----~~~v~~na~~l~~~L~~  238 (337)
                             +-|+++.   .+.+.+.... .  .+........+++..+.   ..+| +++    ++++.+.-+.+.+.|.+
T Consensus       280 ~~glpGlRvG~li~~~~~l~~~~~~~~-~--~~~vs~~~Q~a~~~~L~---d~~~~~~~l~~~r~~l~~r~~~l~~~L~~  353 (496)
T PLN02376        280 DMGLPGFRVGIVYSFNDSVVSCARKMS-S--FGLVSSQTQLMLASMLS---DDQFVDNFLMESSRRLGIRHKVFTTGIKK  353 (496)
T ss_pred             cCCCCcceEEEEEECCHHHHHHHHHHh-h--cCCCCHHHHHHHHHHhC---ChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                   1255544   2434333221 1  11222233333333221   2233 333    66677777888888988


Q ss_pred             CCCEEecCCCCCeEEEEEecCCCc------chHHHHH-HHhhcCceeccCc--------ccchhh
Q psy10669        239 RGYHVVTGGTDVHLILIDLRKNKL------TGSKVEL-VLEEIAIACNKNT--------GISLAA  288 (337)
Q Consensus       239 ~G~~v~~~~t~~h~v~V~~~~~~~------~~~~~~~-~L~~~gI~v~~~~--------girig~  288 (337)
                      .|+.+... ...-.++++++....      +..++.+ .+++.||.+.+-.        .+||+.
T Consensus       354 ~gi~~~~~-~aG~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~f  417 (496)
T PLN02376        354 ADIACLTS-NAGLFAWMDLRHLLRDRNSFESEIELWHIIIDKVKLNVSPGSSFRCTEPGWFRICF  417 (496)
T ss_pred             CCCcccCC-CceEEEEEEchhhhccCCchhHHHHHHHHHHHcCCEEEeCccccCCCCCCEEEEEe
Confidence            88886542 334567888864211      1123334 4456799988743        577753

>PLN02187 rooty/superroot1

Probab=97.75  E-value=0.0043  Score=62.63  Aligned_cols=158  Identities=9%  Similarity=0.047  Sum_probs=86.1

Q ss_pred             cEEEEcCcc-cccccCh---HHHHHHhhhcCCeEEEeccccccccc----------------eeeeec-c-------CCc
Q psy10669        125 DFLSSGTTC-YSRCLDY---ARFRQICDETDSIMFADMSHISGLIA----------------GVKGVT-K-------TGE  176 (337)
Q Consensus       125 klII~~~S~-~~~~~d~---~~l~eia~~~ga~l~vD~AH~~Gli~----------------g~~~T~-~-------~Gg  176 (337)
                      .++++.+++ .+...+.   ++|.++|+++|+++++|+++.-=...                .+.++. |       +-|
T Consensus       207 ~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~pGlRiG  286 (462)
T PLN02187        207 AMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVPGWKIG  286 (462)
T ss_pred             EEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEEEEecchhhcCCccceeE
Confidence            355555654 2466664   45667789999999999987531111                112222 2       235


Q ss_pred             hhhh-h------HHHHHhhccCCC-CCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEE-ecCC
Q psy10669        177 KILY-D------YEEKINNAVFPS-LQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHV-VTGG  247 (337)
Q Consensus       177 ~i~~-~------l~~~i~~~~~p~-~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v-~~~~  247 (337)
                      +++. +      +.+.+.....+. +.++++....+++..++.+-.....++.++.+.++.+.+.+.|.+.+... ....
T Consensus       287 ~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~~~~~~~~~~P  366 (462)
T PLN02187        287 WIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKDIPCVVCPKKP  366 (462)
T ss_pred             EEEecCchhHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCCCC
Confidence            5543 1      223443332222 22344556666666666431123346778888889999999999865432 1112


Q ss_pred             CCCeEEEEEecC---CCc-ch-HHHHHHHhhcCceeccCc
Q psy10669        248 TDVHLILIDLRK---NKL-TG-SKVELVLEEIAIACNKNT  282 (337)
Q Consensus       248 t~~h~v~V~~~~---~~~-~~-~~~~~~L~~~gI~v~~~~  282 (337)
                      ...--+++.+..   .++ +. ....+.+.+.||.+.+-.
T Consensus       367 ~gg~fl~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~  406 (462)
T PLN02187        367 ESCTYLLTKLELSLMDNIKDDIDFCVKLAREENLVFLPGD  406 (462)
T ss_pred             CEeEEEEeecChhhCCCCCCHHHHHHHHHhhCCEEEECcc
Confidence            233345555532   122 23 334566678899988643

>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase

Probab=97.75  E-value=0.0079  Score=58.98  Aligned_cols=245  Identities=16%  Similarity=0.075  Sum_probs=126.9

Q ss_pred             HHHHHHHHHHh-hcccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCC--
Q psy10669         17 ELYSLIKKEKH-RQINGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNL--   91 (337)
Q Consensus        17 ~~~~~~~~e~~-rq~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~--   91 (337)
                      ++..++.+... ..+..+.|-..++-.  ++.+++++.+.+..  ...|+.   ..|.   .++-....+.+.+.+|.  
T Consensus        14 ~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~--~~~Y~~---~~G~---~~lr~aia~~~~~~~~~~~   85 (393)
T TIGR03538        14 KLAALLAGVTPPASKPPIALSIGEPKHPTPAFVLEALRENLHG--LSTYPT---TKGL---PELRQAIARWLERRFDLPT   85 (393)
T ss_pred             HHHHHHHhhhhhcCCCeEEecCCCCCCCCCHHHHHHHHHHhhc--cCCCCC---CCCC---HHHHHHHHHHHHHhhCCcc
Confidence            44455554432 345677777666654  78888888765321  111211   1122   22221111233333343  


Q ss_pred             --CCCCCcceeecCCC-chhHHHHHHhhCCc-------------------------------------------cc--c-
Q psy10669         92 --DPEQWGCNVQPYSG-SPANFAVCEKALPT-------------------------------------------NN--A-  122 (337)
Q Consensus        92 --~~~~~~~~v~~~Sg-t~AN~~v~~aLl~~-------------------------------------------~~--a-  122 (337)
                        +..   .+|..++| +++...++.+++++                                           ++  + 
T Consensus        86 ~~~~~---~~i~it~Ga~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~  162 (393)
T TIGR03538        86 GVDPE---RHVLPVNGTREALFAFAQAVINPGQAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESV  162 (393)
T ss_pred             cCCCC---ceEEECCCcHHHHHHHHHHHcCCCCcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHH
Confidence              321   15888888 46766666776542                                           00  1 


Q ss_pred             --cccEEEEc-Ccc-cccccChH---HHHHHhhhcCCeEEEecccccccc----------------c-------eeeeec
Q psy10669        123 --RFDFLSSG-TTC-YSRCLDYA---RFRQICDETDSIMFADMSHISGLI----------------A-------GVKGVT  172 (337)
Q Consensus       123 --~pklII~~-~S~-~~~~~d~~---~l~eia~~~ga~l~vD~AH~~Gli----------------~-------g~~~T~  172 (337)
                        ++|+|++. +++ .+...+.+   +|.++|+++|+++++|+++.--..                +       .+..|.
T Consensus       163 ~~~~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~  242 (393)
T TIGR03538       163 WRRCQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSL  242 (393)
T ss_pred             hhcceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecc
Confidence              26777664 433 24666644   455778899999999998752110                0       112222


Q ss_pred             -c-------CCchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCE
Q psy10669        173 -K-------TGEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYH  242 (337)
Q Consensus       173 -~-------~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~  242 (337)
                       |       +-|++++  ++.+.+..... ....+.+.+...+...++..  ....+..+++..++.+.+.+.|.+. +.
T Consensus       243 SK~~~~~GlRvG~~i~~~~l~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~L~~~-~~  318 (393)
T TIGR03538       243 SKRSNLPGLRSGFVAGDAEILKAFLRYRT-YHGCAMPIPTQLASIAAWND--EQHVRENRALYREKFAAVLEILGQV-LD  318 (393)
T ss_pred             hhhcCCcccceEEEecCHHHHHHHHHHHH-hhccCcCHHHHHHHHHHhcC--hHHHHHHHHHHHHHHHHHHHHHHhh-Cc
Confidence             2       1266655  46555543321 11112333333333333321  2234566777777888888888764 33


Q ss_pred             EecCCCCCeEEEEEecCCCcchHHHHHHH-hhcCceecc
Q psy10669        243 VVTGGTDVHLILIDLRKNKLTGSKVELVL-EEIAIACNK  280 (337)
Q Consensus       243 v~~~~t~~h~v~V~~~~~~~~~~~~~~~L-~~~gI~v~~  280 (337)
                      +. .....--+++++.   .+..++.+.| ++.||.+.+
T Consensus       319 ~~-~p~gg~f~~~~~~---~~~~~~~~~l~~~~gV~v~p  353 (393)
T TIGR03538       319 LE-LPDAGFYLWPKVP---GDDEAFARALYEEENVTVLP  353 (393)
T ss_pred             cc-CCCeeEEEEEECC---CCHHHHHHHHHHHCCEEEeC
Confidence            32 2244556777776   2445566555 678999854

This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).

>PRK06062 hypothetical protein; Provisional

Probab=97.74  E-value=0.00054  Score=68.92  Aligned_cols=160  Identities=13%  Similarity=0.080  Sum_probs=85.1

Q ss_pred             cEEEEcCcccccc---cC----hHHHHHHhhhcCCeEEEecccc-ccccc--------ee----eeecc--CCch-----
Q psy10669        125 DFLSSGTTCYSRC---LD----YARFRQICDETDSIMFADMSHI-SGLIA--------GV----KGVTK--TGEK-----  177 (337)
Q Consensus       125 klII~~~S~~~~~---~d----~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g~----~~T~~--~Gg~-----  177 (337)
                      ..||+. .++++.   .+    ++.++++|+++|++||+|+.|+ .|=.+        |+    ...+|  .||+     
T Consensus       216 AaviiE-Pv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~~~~gv~PDi~t~gK~lggG~~Piga  294 (451)
T PRK06062        216 AAILLE-SVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWFAIEHFGVVPDLITFAKGVNSGYVPLGG  294 (451)
T ss_pred             EEEEEc-cccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHHHHHhcCCCCCeeeechhhhcCCcCcEE
Confidence            466665 365543   44    5678899999999999999997 22222        11    11112  1343     


Q ss_pred             -hhh-hHHHHHhhcc--CCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHH-HHHHHHHHhC--CCEEecC-CCC
Q psy10669        178 -ILY-DYEEKINNAV--FPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANA-SHLSDEMIKR--GYHVVTG-GTD  249 (337)
Q Consensus       178 -i~~-~l~~~i~~~~--~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na-~~l~~~L~~~--G~~v~~~-~t~  249 (337)
                       +.. ++.+.+....  ...+++ .|+...|+..+++..+.+.   ...+++.+.. ++|.+.|++.  .+.++.. -..
T Consensus       295 v~~~~~i~~~~~~~~~~~~~T~~-gnpl~~Aaa~a~L~~l~~~---~l~~~~~~~G~~~l~~~L~~l~~~~~~v~~vrG~  370 (451)
T PRK06062        295 VAISEAIAATFADRPYPGGLTYS-GHPLACAAAVATINAMEEE---GIVENAARIGAEVLGPGLRELAERHPSVGEVRGL  370 (451)
T ss_pred             EEEcHHHHHHhccCCCCCCCCCC-CCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHhcCCcEEeEecc
Confidence             333 5655554321  223444 3566666666666665432   3566666665 4677777662  2222210 001


Q ss_pred             CeEEEEEecCCC-----c--------chHHHHHHHhhcCceeccCc-ccchhhh
Q psy10669        250 VHLILIDLRKNK-----L--------TGSKVELVLEEIAIACNKNT-GISLAAE  289 (337)
Q Consensus       250 ~h~v~V~~~~~~-----~--------~~~~~~~~L~~~gI~v~~~~-girig~~  289 (337)
                      .-+.-|.+....     +        ....+.+.|.+.||.+.... .+||..+
T Consensus       371 Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gvl~~~~~~~lrl~pp  424 (451)
T PRK06062        371 GVFWALELVADRETREPLAPYGASSAAMAAVKAACKERGLLPFVNGNRIHVVPP  424 (451)
T ss_pred             ccEEEEEEcccccccCCCcccchhhHHHHHHHHHHHHCCcEEeecCCEEEEECC
Confidence            123334432110     0        13456667777899976432 5676544

>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=97.69  E-value=0.00065  Score=67.75  Aligned_cols=147  Identities=14%  Similarity=0.109  Sum_probs=88.1

Q ss_pred             ccccChHHHHHHhhhcCCeEEEeccccccc--cc--------ee----eeecc--CCchh-h-----h-hHHHHHhhc--
Q psy10669        135 SRCLDYARFRQICDETDSIMFADMSHISGL--IA--------GV----KGVTK--TGEKI-L-----Y-DYEEKINNA--  189 (337)
Q Consensus       135 ~~~~d~~~l~eia~~~ga~l~vD~AH~~Gl--i~--------g~----~~T~~--~Gg~i-~-----~-~l~~~i~~~--  189 (337)
                      +-...+++++++|+++|++||+|+.| .|+  .+        ++    ...+|  .||+. +     . ++.+.+...  
T Consensus       219 ~~~~~l~~lr~lc~~~g~llI~DEv~-tG~GrtG~~~a~~~~gv~PDi~t~gK~l~gG~~p~~av~~~~~i~~~~~~~~~  297 (422)
T PRK05630        219 HDVALIEGVRTLCDKHDILLIADEIA-TGFGRTGELFATLAAGVTPDIMCVGKALTGGFMSFAATLCTDKVAQLISTPNG  297 (422)
T ss_pred             CCHHHHHHHHHHHHHcCCEEEEecce-eCCCcCchhhHHHhcCCCCCeeeeechhhcCccccceeeccHHHHHHHhccCC
Confidence            34455678999999999999999999 555  11        11    11123  14532 2     2 455554321  


Q ss_pred             ----cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEec-CCCCCeEEEEEecCCCcc
Q psy10669        190 ----VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVT-GGTDVHLILIDLRKNKLT  263 (337)
Q Consensus       190 ----~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~-~~t~~h~v~V~~~~~~~~  263 (337)
                          ....++ +.|+...++...++..+.+ +  ...+++.++.++|.+.|++. .+..+. --....++.|.+.... +
T Consensus       298 ~~~~~h~~T~-~g~Pla~aaa~aaL~~l~~-~--~~~~~~~~~g~~l~~~L~~l~~~~~v~~vRg~Gl~~~ie~~~~~-~  372 (422)
T PRK05630        298 GGALMHGPTF-MANPLACAVAHASLEIIET-G--MWRKQVKRIEAELIAGLSPLAHLPGVADVRVLGAIGVVEMEQPV-D  372 (422)
T ss_pred             CCccccCCCC-cCCHHHHHHHHHHHHHHHh-C--cHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccccEEEEEECCcc-c
Confidence                112223 4666777777677766643 2  44679999999999988752 122121 0123677778776532 3


Q ss_pred             hHHHHHHHhhcCceeccCc-ccchh
Q psy10669        264 GSKVELVLEEIAIACNKNT-GISLA  287 (337)
Q Consensus       264 ~~~~~~~L~~~gI~v~~~~-girig  287 (337)
                      ...+...|.+.|+.+.... -+||.
T Consensus       373 ~~~~~~~~~~~Gl~~~~~g~~l~~~  397 (422)
T PRK05630        373 MEEATQAAVDHGVWLRPFGRLVYVM  397 (422)
T ss_pred             HHHHHHHHHHCCeEEEecCCEEEEE
Confidence            5567777888899987532 45554

>PTZ00377 alanine aminotransferase; Provisional

Probab=97.67  E-value=0.019  Score=58.13  Aligned_cols=157  Identities=15%  Similarity=0.073  Sum_probs=82.3

Q ss_pred             cccE-EEEcCcc-cccccC---hHHHHHHhhhcCCeEEEeccccc----c---ccc------e----------e--eeec
Q psy10669        123 RFDF-LSSGTTC-YSRCLD---YARFRQICDETDSIMFADMSHIS----G---LIA------G----------V--KGVT  172 (337)
Q Consensus       123 ~pkl-II~~~S~-~~~~~d---~~~l~eia~~~ga~l~vD~AH~~----G---li~------g----------~--~~T~  172 (337)
                      ++|+ +++++++ .+...+   .++|.++|+++|+++++|+++.-    +   ...      .          +  .++.
T Consensus       218 ~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~  297 (481)
T PTZ00377        218 TPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHST  297 (481)
T ss_pred             CeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecC
Confidence            3565 4455544 347777   45566788999999999998742    1   000      0          1  1111


Q ss_pred             -c--------CCchhh----h-hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHH--hc-------hhhHHHHHHHHHHH
Q psy10669        173 -K--------TGEKIL----Y-DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQA--QS-------DEFKSYQAQVKANA  229 (337)
Q Consensus       173 -~--------~Gg~i~----~-~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~--~~-------~~~~~y~~~v~~na  229 (337)
                       |        +.|+++    . ++.+.+.....+. . +++.....+.+.++..-  ..       .+.+..+++..++.
T Consensus       298 SK~~~~~~GlRiG~~~~~~~p~~li~~l~~~~~~~-~-~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr  375 (481)
T PTZ00377        298 SKGIIGECGRRGGYFELTNIPPEVREQIYKLASIN-L-CSNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRA  375 (481)
T ss_pred             CcccccCCcCceEEEEEeCCCHHHHHHHHHHhhee-c-CCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHH
Confidence             2        336664    2 4666665543221 2 34445555555554210  00       11122223456777


Q ss_pred             HHHHHHHHhC-CCEEecCCCCCeEEEEEecC-CCc-----------chHHHHHHHhhcCceeccCc
Q psy10669        230 SHLSDEMIKR-GYHVVTGGTDVHLILIDLRK-NKL-----------TGSKVELVLEEIAIACNKNT  282 (337)
Q Consensus       230 ~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~-~~~-----------~~~~~~~~L~~~gI~v~~~~  282 (337)
                      +.+.+.|.+. |+.+... ...--+++++.. .+.           +...+...|++.||.+.+-.
T Consensus       376 ~~l~~~L~~~~g~~~~~p-~gg~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~  440 (481)
T PTZ00377        376 ELLTDELNKIEGVSCQPV-EGAMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGS  440 (481)
T ss_pred             HHHHHHHhcCCCcEeecC-CeeEEEEeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCc
Confidence            7888888875 8887642 122344555531 111           11234567788899987633

>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=97.66  E-value=0.0012  Score=65.94  Aligned_cols=148  Identities=9%  Similarity=0.067  Sum_probs=82.9

Q ss_pred             cEEEEcCccccc---ccC----hHHHHHHhhhcCCeEEEecccccc-c--cc-----ee----eeec-------cCCchh
Q psy10669        125 DFLSSGTTCYSR---CLD----YARFRQICDETDSIMFADMSHISG-L--IA-----GV----KGVT-------KTGEKI  178 (337)
Q Consensus       125 klII~~~S~~~~---~~d----~~~l~eia~~~ga~l~vD~AH~~G-l--i~-----g~----~~T~-------~~Gg~i  178 (337)
                      ..||+. ..+++   ..+    +++|+++|+++|++||+|+.|+.. .  .+     |+    +..+       |-|+++
T Consensus       202 aavi~E-Pv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~Rt~~~~a~~~~gv~PDivt~gK~lggG~Pi~av~  280 (428)
T PRK12389        202 AAVLVE-PIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFRFMYGGAQDLLGVEPDLTALGKIIGGGLPIGAYG  280 (428)
T ss_pred             EEEEEe-CCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccccccccCcchhhHHhCCCCCeeeechhhcCCCceeEEe
Confidence            456664 35544   344    678999999999999999999731 1  11     11    1112       234443


Q ss_pred             hh-hHHHHHhh--ccCC-CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh----CCC--EEecCCC
Q psy10669        179 LY-DYEEKINN--AVFP-SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK----RGY--HVVTGGT  248 (337)
Q Consensus       179 ~~-~l~~~i~~--~~~p-~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~----~G~--~v~~~~t  248 (337)
                      .. ++.+.+.+  ..+. +++ +.|+...|+..+.+..+.+   ....+++.++.++|.+.|++    .++  ++..+. 
T Consensus       281 ~~~~i~~~~~~~~~~~~~~T~-~gnpl~~Aaala~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~r~~-  355 (428)
T PRK12389        281 GRKDIMEQVAPLGPAYQAGTM-AGNPASMAAGIACLEVLQQ---EGVYEKLDRLGAMLEEGILEAAEKHGITITINRLK-  355 (428)
T ss_pred             EHHHHHhhhccCCCcccccCC-ccCHHHHHHHHHHHHHHhc---ccHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecC-
Confidence            33 56555532  1111 222 3555666666566665533   24778899999999999886    343  222211 


Q ss_pred             CCeEEEEEecCCCc------------chHHHHHHHhhcCceecc
Q psy10669        249 DVHLILIDLRKNKL------------TGSKVELVLEEIAIACNK  280 (337)
Q Consensus       249 ~~h~v~V~~~~~~~------------~~~~~~~~L~~~gI~v~~  280 (337)
                       . ++-|.+.....            ....+.+.|.+.||.+.+
T Consensus       356 -g-~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~  397 (428)
T PRK12389        356 -G-ALTVYFTDEKVTNYDQAERSDGEAFGKFFKLMLNQGINLAP  397 (428)
T ss_pred             -c-EEEEEEeCCCCCChhhhcccCHHHHHHHHHHHHHCCcEeec
Confidence             1 33344432211            123455666678999875

>PRK07568 aspartate aminotransferase; Provisional

Probab=97.66  E-value=0.016  Score=56.64  Aligned_cols=151  Identities=11%  Similarity=0.055  Sum_probs=81.1

Q ss_pred             ccEEEEc-Ccc-ccccc---ChHHHHHHhhhcCCeEEEeccccc----c-----ccc--------eeeeec-c-------
Q psy10669        124 FDFLSSG-TTC-YSRCL---DYARFRQICDETDSIMFADMSHIS----G-----LIA--------GVKGVT-K-------  173 (337)
Q Consensus       124 pklII~~-~S~-~~~~~---d~~~l~eia~~~ga~l~vD~AH~~----G-----li~--------g~~~T~-~-------  173 (337)
                      +++|++. +++ .+...   ++++|.++|+++|+++++|+++.-    |     +..        .++.+. |       
T Consensus       163 ~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~  242 (397)
T PRK07568        163 TKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGA  242 (397)
T ss_pred             ceEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhccCCCc
Confidence            4666554 433 23444   466777889999999999999741    1     000        112222 2       


Q ss_pred             CCchhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCC
Q psy10669        174 TGEKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTD  249 (337)
Q Consensus       174 ~Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~  249 (337)
                      +-|++++   ++.+.+....... .+.+ .....+++.++..- +...++.++.+.++.+.+.+.|.+. |+.+... ..
T Consensus       243 R~G~~~~~~~~~~~~~~~~~~~~-~~~s-~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p-~g  318 (397)
T PRK07568        243 RIGCLISKNKELIAAAMKLCQAR-LSPP-TLEQIGAAALLDTP-ESYFDEVREEYKKRRDILYEELNKIPGVVCEKP-KG  318 (397)
T ss_pred             ceEEEecCCHHHHHHHHHHhhcc-CCCC-cHHHHHHHHHhhCC-HHHHHHHHHHHHHHHHHHHHHHhcCCCceecCC-Cc
Confidence            2355543   3544443222221 2222 23333444444321 2234566777888888899999875 6665432 33


Q ss_pred             CeEEEEEecCCCcchHHHHHHHhh------cCceecc
Q psy10669        250 VHLILIDLRKNKLTGSKVELVLEE------IAIACNK  280 (337)
Q Consensus       250 ~h~v~V~~~~~~~~~~~~~~~L~~------~gI~v~~  280 (337)
                      +..+++.+...  +..++.+.|.+      .||.+.+
T Consensus       319 ~~~~~~~l~~~--~~~~~~~~l~~~~~~~~~gv~v~p  353 (397)
T PRK07568        319 AFYIIAKLPVD--DAEDFAKWLLTDFNYNGETVMVAP  353 (397)
T ss_pred             ceEEEEecCCC--CHHHHHHHHHhhcccccceEEEeC
Confidence            44567777542  45566666542      5887765

>PRK06836 aspartate aminotransferase; Provisional

Probab=97.66  E-value=0.064  Score=52.69  Aligned_cols=64  Identities=11%  Similarity=0.072  Sum_probs=43.6

Q ss_pred             HHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCc------ccchhh
Q psy10669        222 QAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT------GISLAA  288 (337)
Q Consensus       222 ~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~------girig~  288 (337)
                      ++...++-+.+.+.|.+.|+.+... ..+..+++.+.. . +..++.+.|.+.||.+.+..      ++||+.
T Consensus       302 ~~~~~~~r~~l~~~L~~~g~~~~~~-~gg~~~~~~~~~-~-~~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~  371 (394)
T PRK06836        302 VSIYKRNRDLLYDGLTELGFECVKP-QGAFYLFPKSPE-E-DDVAFCEKAKKHNLLLVPGSGFGCPGYFRLSY  371 (394)
T ss_pred             HHHHHHHHHHHHHHHHhCCCEeecC-CceEEEEEeCCC-C-CHHHHHHHHHhCCEEEECchhcCCCCeEEEEe
Confidence            4455667777888888889887642 234455665544 2 66777788888899988743      577764

>PRK06541 hypothetical protein; Provisional

Probab=97.65  E-value=0.001  Score=67.16  Aligned_cols=161  Identities=19%  Similarity=0.205  Sum_probs=90.6

Q ss_pred             cEEEEcCccccc---ccC----hHHHHHHhhhcCCeEEEeccc-cccccc--------ee----eeec--------cCCc
Q psy10669        125 DFLSSGTTCYSR---CLD----YARFRQICDETDSIMFADMSH-ISGLIA--------GV----KGVT--------KTGE  176 (337)
Q Consensus       125 klII~~~S~~~~---~~d----~~~l~eia~~~ga~l~vD~AH-~~Gli~--------g~----~~T~--------~~Gg  176 (337)
                      ..||+. .++++   ..+    +++|+++|+++|++||+|+.| +.|-.+        ++    ...+        |.|+
T Consensus       223 Aavi~E-Pv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv~PDivt~gK~l~~G~~piga  301 (460)
T PRK06541        223 AAVFLE-PVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGYVPDIITCAKGITSGYSPLGA  301 (460)
T ss_pred             EEEEEC-CccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhhhhhhcCCCCCEEEecccccCCccceeE
Confidence            456665 35443   334    677999999999999999999 566544        11    1111        3344


Q ss_pred             hhhh-hHHHHHhhc--cCC-CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEec-CCCCC
Q psy10669        177 KILY-DYEEKINNA--VFP-SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVT-GGTDV  250 (337)
Q Consensus       177 ~i~~-~l~~~i~~~--~~p-~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~-~~t~~  250 (337)
                      ++.. ++.+.+...  .+. +.+-+.|+...|+....+..+.+   ....+++.++.++|.+.|.+. .+.++. --...
T Consensus       302 v~~~~~i~~~~~~~~~~~~~~~T~~gnp~~~aaala~l~~l~~---~~~~~~~~~~g~~l~~~L~~l~~~~~v~~vrg~G  378 (460)
T PRK06541        302 MIASDRLFEPFLDGPTMFLHGYTFGGHPVSAAVALANLDIFER---EGLLDHVRDNEPAFRATLEKLLDLPIVGDVRGDG  378 (460)
T ss_pred             EEEcHHHHHHhhcCCCccccCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecc
Confidence            4444 455544321  111 11223455565555555555432   256789999999999999884 233221 01244


Q ss_pred             eEEEEEecCCC-----cc--------hHHHHHHHhhcCceeccC----cccchhhh
Q psy10669        251 HLILIDLRKNK-----LT--------GSKVELVLEEIAIACNKN----TGISLAAE  289 (337)
Q Consensus       251 h~v~V~~~~~~-----~~--------~~~~~~~L~~~gI~v~~~----~girig~~  289 (337)
                      .+.-|.+....     ++        ...+.+.|.+.||.+...    .-|||..+
T Consensus       379 l~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~g~~~lrl~Pp  434 (460)
T PRK06541        379 YFYGIELVKDKATKETFTDDESERLLRGFLSPALFEAGLYCRADDRGDPVVQLAPP  434 (460)
T ss_pred             eEEEEEEecCcccccCCcchhhhhhHHHHHHHHHHhCCeEEEecCCCCCEEEEECC
Confidence            55556653211     00        023455666789999753    14777654

>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]

Probab=97.60  E-value=0.00086  Score=64.71  Aligned_cols=124  Identities=13%  Similarity=0.036  Sum_probs=88.5

Q ss_pred             ccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhH
Q psy10669         30 INGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPAN  109 (337)
Q Consensus        30 ~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN  109 (337)
                      .+...+..+..|.-.....+..- +.-+ ..|+.-+|.  +|...+.+|    +|++.+=|--.     .+.+.||..|.
T Consensus        24 ara~PIyqtTsy~F~d~~haa~l-F~l~-~~G~iYsRi--~NPT~~vlE----~RiAaLEGG~a-----a~a~aSG~AA~   90 (426)
T COG2873          24 ARAVPIYQTTSYVFDDTDHAAAL-FGLK-EPGNIYTRI--MNPTTDVLE----ERIAALEGGVA-----ALAVASGQAAI   90 (426)
T ss_pred             ceecceeeeeeeecCCHHHHHHH-hCCC-cCCceeeec--cCchHHHHH----HHHHHhhcchh-----hhhhccchHHH
Confidence            34567788888885555444432 2222 246666776  566678888    58888877653     58888999998


Q ss_pred             HHHHHhhCCc----------------------------------------ccc---cccEEEEcCcccc--cccChHHHH
Q psy10669        110 FAVCEKALPT----------------------------------------NNA---RFDFLSSGTTCYS--RCLDYARFR  144 (337)
Q Consensus       110 ~~v~~aLl~~----------------------------------------~~a---~pklII~~~S~~~--~~~d~~~l~  144 (337)
                      ..++..|+++                                        +.+   ++|+|.+..-.+|  ...|++.+.
T Consensus        91 ~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd~~d~~~~~~aI~~nTkavf~EtigNP~~~v~Die~ia  170 (426)
T COG2873          91 TYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVDPDDPENFEAAIDENTKAVFAETIGNPGLDVLDIEAIA  170 (426)
T ss_pred             HHHHHHhccCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeCCCCHHHHHHHhCcccceEEEEeccCCCccccCHHHHH
Confidence            8888998764                                        111   2789988644454  789999999


Q ss_pred             HHhhhcCCeEEEeccccccccc
Q psy10669        145 QICDETDSIMFADMSHISGLIA  166 (337)
Q Consensus       145 eia~~~ga~l~vD~AH~~Gli~  166 (337)
                      +||+++|++|+||-.=..+.+.
T Consensus       171 ~iAh~~gvpliVDNT~atpyl~  192 (426)
T COG2873         171 EIAHRHGVPLIVDNTFATPYLC  192 (426)
T ss_pred             HHHHHcCCcEEEecCCCcceec
Confidence            9999999999999986666544

>PRK05367 glycine dehydrogenase; Provisional

Probab=97.59  E-value=0.00069  Score=73.86  Aligned_cols=158  Identities=10%  Similarity=0.121  Sum_probs=98.3

Q ss_pred             CcccccccChHHHHHHhhhcCCeEEEeccccccccc------e---eeeecc-----C------Cchhhh--hHHHHHhh
Q psy10669        131 TTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA------G---VKGVTK-----T------GEKILY--DYEEKINN  188 (337)
Q Consensus       131 ~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~------g---~~~T~~-----~------Gg~i~~--~l~~~i~~  188 (337)
                      ++.++...|+++|.++||+.|++++||+.|.++.+.      |   ++++++     .      -||+..  ++...+..
T Consensus       215 p~~~G~i~d~~~i~~~ah~~Gal~~vda~~~Al~~l~~pge~GaDi~vgs~qkfg~P~g~GGP~aGflavr~~~~r~lpg  294 (954)
T PRK05367        215 PGTSGEVRDYTALIAAAHARGALVAVAADLLALTLLTPPGEMGADIAVGSAQRFGVPMGFGGPHAAYFAVRDAYKRSMPG  294 (954)
T ss_pred             CCCCeeeccHHHHHHHHHHcCCEEEEEehhhhccCCCChhhcCCCEEEeeCcccCCCCCCCCCCEEEEEECHHHHhhCCC
Confidence            556788889999999999999999999988544333      1   233321     1      245433  34332211


Q ss_pred             c---------cCC--------------CCCCCCcHHHHHHHHHHH-----HHHhchhhHHHHHHHHHHHHHHHHHHHhCC
Q psy10669        189 A---------VFP--------------SLQGGPHNHAIGAIATAM-----LQAQSDEFKSYQAQVKANASHLSDEMIKRG  240 (337)
Q Consensus       189 ~---------~~p--------------~~~g~~~~~~iaala~a~-----~e~~~~~~~~y~~~v~~na~~l~~~L~~~G  240 (337)
                      .         -.|              .-.+|+|....-++.+.+     .++.....++.++++..++.+|+++|.+.|
T Consensus       295 rivG~s~d~~g~~~~~lalqtReqhiRrekaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~G  374 (954)
T PRK05367        295 RIVGVSVDAAGNPALRLALQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRALG  374 (954)
T ss_pred             CeeeeecccCCCcccccccccccccccccccccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcC
Confidence            0         000              012455554322222221     333334557889999999999999999999


Q ss_pred             CEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCc--ccchhhhhHh
Q psy10669        241 YHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT--GISLAAEIQA  292 (337)
Q Consensus       241 ~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~--girig~~~~t  292 (337)
                      +++... ..-..+.+.+.   .+..++.++|.+.||.+....  .+||...+.+
T Consensus       375 ~~~~~~-~~f~~~~~~~~---~~~~~i~~~l~~~gi~~~~~~~~~l~is~~e~~  424 (954)
T PRK05367        375 LEVVHD-SFFDTLTVEVG---GDAAAVLARALAAGINLRRVDDDHVGISLDETT  424 (954)
T ss_pred             cccCCC-CCCCeEEEeCC---CCHHHHHHHHHHCCceeccccCCEEEEEecccC
Confidence            998753 22245555543   267888999999999986543  6777655544

>KOG0053|consensus

Probab=97.56  E-value=0.0016  Score=63.93  Aligned_cols=155  Identities=12%  Similarity=0.071  Sum_probs=99.2

Q ss_pred             ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669         70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------  119 (337)
Q Consensus        70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------  119 (337)
                      |+...+.+|    +.++++-|+++     .+.|.||..|-..++..|+++                              
T Consensus        75 ~nPt~~~le----~~iaal~ga~~-----~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~  145 (409)
T KOG0053|consen   75 GNPTRDVLE----SGIAALEGAAH-----ALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGD  145 (409)
T ss_pred             CCCchHHHH----HHHHHHhCCce-----EEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceee
Confidence            566778888    47788999986     699999998877778888765                              


Q ss_pred             --------ccc-----cccEEEEc-Ccc-cccccChHHHHHHhhhcCCeEEEeccccccccc-----e---ee-eec---
Q psy10669        120 --------NNA-----RFDFLSSG-TTC-YSRCLDYARFRQICDETDSIMFADMSHISGLIA-----G---VK-GVT---  172 (337)
Q Consensus       120 --------~~a-----~pklII~~-~S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----g---~~-~T~---  172 (337)
                              ..+     +.++|.+. +++ +....|+++++++||++|++++||.+-..++.-     |   ++ |.+   
T Consensus       146 ~vd~~~~~~~~~~i~~~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf~~p~~~~pL~lGADIV~hSaTKyi  225 (409)
T KOG0053|consen  146 FVDVDDLKKILKAIKENTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTFGSPYNQDPLPLGADIVVHSATKYI  225 (409)
T ss_pred             eechhhHHHHHHhhccCceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEeCCcCcccccChhhcCCCEEEEeeeeee
Confidence                    111     25777776 444 458999999999999999999999997777544     2   22 322   


Q ss_pred             --c---CCchhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC
Q psy10669        173 --K---TGEKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR  239 (337)
Q Consensus       173 --~---~Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~  239 (337)
                        |   -||.++.   ++.+++.... -.+.+++++-..-=+...+     +...-++++--+|+..+++.|...
T Consensus       226 ~Ghsdvi~G~iv~n~~~~~~~l~~~~-~~lg~~~~p~~~~ll~Rgl-----ktl~lRi~~~~ena~~~A~~Le~~  294 (409)
T KOG0053|consen  226 GGHSDVIGGSVVLNSEELASRLKFLQ-EDLGWCEDPFDLFLLSRGL-----KTLHLRINKHSENALKIALLLEAH  294 (409)
T ss_pred             cCCcceeeeEEecCcHHHHHHHHHHH-HHhcCCCCHHHHHHHhcCc-----chhhhhHHHHHHHHHHHHHHhhhC
Confidence              2   2555543   4555444332 1222233332221111111     123355677778888888888873

>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]

Probab=97.56  E-value=0.0063  Score=60.90  Aligned_cols=161  Identities=12%  Similarity=0.085  Sum_probs=84.7

Q ss_pred             ccEEEEcCcccc-------cccChHHHHHHhhhcCCeEEEeccccc-cccc--------e----eeeecc-C-Cchhh--
Q psy10669        124 FDFLSSGTTCYS-------RCLDYARFRQICDETDSIMFADMSHIS-GLIA--------G----VKGVTK-T-GEKIL--  179 (337)
Q Consensus       124 pklII~~~S~~~-------~~~d~~~l~eia~~~ga~l~vD~AH~~-Gli~--------g----~~~T~~-~-Gg~i~--  179 (337)
                      |..||+. ...+       -..=++++++||+++|++||+|+-|+- |=.|        |    +....| - ||+=+  
T Consensus       223 vAaiI~E-pIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~~fa~E~~gv~PDivt~aK~ig~G~Pl~a  301 (447)
T COG0160         223 VAAIIIE-PIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIVTLAKSLGGGLPLSA  301 (447)
T ss_pred             eeEEEEe-cccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccccchhhhhcCCCCCEEEecccccCCCceeE
Confidence            5677775 2332       222245688999999999999999862 3322        1    111112 1 23333  


Q ss_pred             ---h-hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh--CCCEEecC-CCCCeE
Q psy10669        180 ---Y-DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK--RGYHVVTG-GTDVHL  252 (337)
Q Consensus       180 ---~-~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~--~G~~v~~~-~t~~h~  252 (337)
                         . ++.+ ..+..+.+++++ |+...|+..+.++.+.+   +...++..+.-++|.++|.+  .-+..+++ -.-.-+
T Consensus       302 vv~r~ei~~-~~~g~~~~Tf~G-Npva~Aaa~AvL~vie~---e~L~~~a~~~G~~l~~~L~~l~~~~~~IgdVRG~Glm  376 (447)
T COG0160         302 VVGRAEIMD-WPPGGHGGTFGG-NPVACAAALAVLDVIEE---ENLLERAAELGEYLRDRLEELQEKHPLIGDVRGLGLM  376 (447)
T ss_pred             EeccHHhcc-cCCcccCCCCCc-CHHHHHHHHHHHHHHHH---ccHHHHHHHHHHHHHHHHHHHHhhcCceecccccceE
Confidence               2 3433 333444455544 44444444444554532   26777777888888888876  33444431 112234


Q ss_pred             EEEEecCCC----cchHHHH---HHHhhcCceeccCc----ccchhhhh
Q psy10669        253 ILIDLRKNK----LTGSKVE---LVLEEIAIACNKNT----GISLAAEI  290 (337)
Q Consensus       253 v~V~~~~~~----~~~~~~~---~~L~~~gI~v~~~~----girig~~~  290 (337)
                      +-|.+....    -++....   +.+.+.|+.+....    .|||--|.
T Consensus       377 ~giE~v~d~~t~~p~~~~~~~i~~~~~~~Glil~~~G~~~nviRi~PPL  425 (447)
T COG0160         377 IGVELVKDRDTKEPDAELAAKIVARAFERGLLLLTCGPHGNVLRILPPL  425 (447)
T ss_pred             EEEEEecCCCCCCCCHHHHHHHHHHHHHcCCEEeccCCCCcEEEEeCCc
Confidence            445544321    2334333   44445688765443    67776553

>PRK08593 4-aminobutyrate aminotransferase; Provisional

Probab=97.56  E-value=0.0023  Score=64.23  Aligned_cols=146  Identities=13%  Similarity=0.112  Sum_probs=80.5

Q ss_pred             hHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeecc--CCc----hhhh--hHHHHHhhccCCCCCCCC
Q psy10669        140 YARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTK--TGE----KILY--DYEEKINNAVFPSLQGGP  198 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~--~Gg----~i~~--~l~~~i~~~~~p~~~g~~  198 (337)
                      ++.++++|+++|++||+|+.|+ .|-.+        +    +...+|  .||    .+++  ++.+.++.... ..+.+.
T Consensus       230 l~~l~~lc~~~g~llI~DEv~tg~GrtG~~~a~~~~gv~pDi~t~gK~l~~G~p~gav~~~~~i~~~~~~~~~-~~T~~~  308 (445)
T PRK08593        230 FEALYKFCREHGILFAVDDIQQGLGRTGKWSSISHFNITPDLMSFGKSLAGGMPMSAIVGRKEIMESLEAPAH-LFTTGA  308 (445)
T ss_pred             HHHHHHHHHHcCCEEEEechhhCCCcCchHHHHHhcCCCCCEeeecccccCCcccEEEEEcHHHHhhhccCCC-CCCCCC
Confidence            6678999999999999999984 43322        1    111122  123    2222  56555543211 223345


Q ss_pred             cHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCEEecC-CCCCeEEEEEecCC---C----cchHHHH
Q psy10669        199 HNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYHVVTG-GTDVHLILIDLRKN---K----LTGSKVE  268 (337)
Q Consensus       199 ~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~v~~~-~t~~h~v~V~~~~~---~----~~~~~~~  268 (337)
                      ++...|+..+++..+.+   ++..+++.++.++|.+.|.+.  .+.++.. -...-++-+.+...   .    .....+.
T Consensus       309 ~pl~~aaa~a~l~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~gi~l~~~~~~~~~~~~~~~~~~  385 (445)
T PRK08593        309 NPVSCAAALATIDMIED---ESLLQRSAEKGEYARKRFDQWVSKYNFVGDVRGYGLSIGIDIVSDKKLKTRDNEAALKIC  385 (445)
T ss_pred             CHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeccceEEEEEEecCCCcCCCcHHHHHHHH
Confidence            66666666666666543   257888999999999998862  2332220 00111222333211   0    1234566


Q ss_pred             HHHhhcCceeccCc--ccchhhh
Q psy10669        269 LVLEEIAIACNKNT--GISLAAE  289 (337)
Q Consensus       269 ~~L~~~gI~v~~~~--girig~~  289 (337)
                      ..|.+.||.+....  -+|+..+
T Consensus       386 ~~~~~~Gv~~~~~~~~~lr~~p~  408 (445)
T PRK08593        386 NYCFEHGVVIIAVAGNVLRFQPP  408 (445)
T ss_pred             HHHHHCCeEEeccCCCEEEEECC
Confidence            66777899986532  4666544

>PRK07046 aminotransferase; Validated

Probab=97.54  E-value=0.0037  Score=62.99  Aligned_cols=95  Identities=17%  Similarity=0.207  Sum_probs=56.4

Q ss_pred             hHHHHHHhhhcCCeEEEeccccc--cccc-----e----eeeecc--CCch-----hhh-hHHHHHhhcc---------C
Q psy10669        140 YARFRQICDETDSIMFADMSHIS--GLIA-----G----VKGVTK--TGEK-----ILY-DYEEKINNAV---------F  191 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~~--Gli~-----g----~~~T~~--~Gg~-----i~~-~l~~~i~~~~---------~  191 (337)
                      ++.++++|+++|++||+|+-|+.  |+-+     |    ++..+|  .||+     +.. ++.+.+.+..         .
T Consensus       241 l~~lr~lc~~~g~llI~DEV~tfr~g~Gg~~~~~gv~PDi~t~gK~lggG~Pi~av~g~~~i~~~~~~~~~~~~~~~~~~  320 (453)
T PRK07046        241 HEALRELTRRYGTLLVIDETHTISSGPGGYTRAHGLEPDFLVVGKPIAGGVPCAVYGFSAELAERAQAAKASAPPGHSGI  320 (453)
T ss_pred             HHHHHHHHHHhCCEEEEEccccCccCCcchhHHhCCCccceeehhhhcCCCcceeeeehHHHHHHHhhccccCCCCCcee
Confidence            46789999999999999999973  2222     1    111223  1343     222 5555554211         1


Q ss_pred             CCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh
Q psy10669        192 PSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK  238 (337)
Q Consensus       192 p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~  238 (337)
                      .+++ +.|+..+|+..+.+..+.+   ++..+++.+..++|+++|++
T Consensus       321 ~~T~-~gnpl~~aa~~a~L~~l~~---~~~~~~~~~~g~~l~~~L~~  363 (453)
T PRK07046        321 GTTL-SANALAMAAMRATLAEVMT---EAAYAHMLALAARLAAGLRA  363 (453)
T ss_pred             CCCC-cccHHHHHHHHHHHHHHhc---ccHHHHHHHHHHHHHHHHHH
Confidence            1122 3455566665555655533   24577888889999888875

>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor

Probab=97.54  E-value=7.9e-05  Score=72.05  Aligned_cols=177  Identities=15%  Similarity=0.177  Sum_probs=41.1

Q ss_pred             CCCHHHHHHHhhhhhhccCC-------CCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHH
Q psy10669         41 FTSLAVLECLGSCLQNKYSE-------GLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVC  113 (337)
Q Consensus        41 ~~~p~V~~a~~~~l~~~y~~-------g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~  113 (337)
                      .+++++.+++... ...|+.       |..|+|+       +.+|    +.++.++|++.     .+...++..|.+-++
T Consensus        17 ~l~~~a~~a~~~~-a~~Y~nLE~dl~~G~Rg~R~-------~~v~----~ll~~ltgAea-----A~VvNnnaAAv~L~l   79 (367)
T PF03841_consen   17 PLSEEAIEAVAEV-ASGYSNLEYDLETGKRGSRY-------AHVE----ELLCELTGAEA-----ALVVNNNAAAVLLAL   79 (367)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ccccccccccccc-cccccccccccccccccccc-------cccc----ccccccccccc-----ccccccccccccccc
Confidence            3577788877653 233422       3344443       2355    46688999997     466667778877777


Q ss_pred             HhhCCc--------------------------------------------ccc---cccEE-EEcCcccc-----cccCh
Q psy10669        114 EKALPT--------------------------------------------NNA---RFDFL-SSGTTCYS-----RCLDY  140 (337)
Q Consensus       114 ~aLl~~--------------------------------------------~~a---~pklI-I~~~S~~~-----~~~d~  140 (337)
                      .++.+.                                            +.+   ++.+| -+-.|+|-     -..+.
T Consensus        80 ~~la~~~EvIvsRGelVeiGgsFRip~vm~~sGa~lvEVGttN~t~~~Dye~AI~e~Ta~ll~Vh~Sn~~i~GFt~~~~~  159 (367)
T PF03841_consen   80 NTLAKGKEVIVSRGELVEIGGSFRIPDVMRQSGARLVEVGTTNRTHLSDYEKAITENTAALLKVHTSNFRIQGFTGEVSL  159 (367)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccH
Confidence            888542                                            222   14444 44347773     35678


Q ss_pred             HHHHHHhhhcCCeEEEeccccccccc-------------------e---eeeec------cCCchhhh--hHHHHHhh--
Q psy10669        141 ARFRQICDETDSIMFADMSHISGLIA-------------------G---VKGVT------KTGEKILY--DYEEKINN--  188 (337)
Q Consensus       141 ~~l~eia~~~ga~l~vD~AH~~Gli~-------------------g---~~~T~------~~Gg~i~~--~l~~~i~~--  188 (337)
                      +++.++|+++|.++|+|.+  +|++-                   |   ++|.+      |+.|+|++  ++.++++.  
T Consensus       160 ~el~~la~~~~lp~i~Dlg--sG~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGGPQaGiI~Gkk~lI~~lk~~p  237 (367)
T PF03841_consen  160 EELAELAKEHGLPVIVDLG--SGLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGGPQAGIIVGKKELIEKLKKHP  237 (367)
T ss_dssp             -HHHHHHHHHT--EEEE-T--THHHHHHHTT----------CCCCT-SEEEEETTSSSSS-S-EEEEEEHHHHHHHHHHH
T ss_pred             HHHHHHHhhcCCcEEEECC--CCCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCCCCCeEEEEeCHHHHHHHhhCC
Confidence            8999999999999999998  44332                   1   45554      67899987  67776653  


Q ss_pred             ccCCCCCCCCcHHHHHHHHHHHHHHhchhh-----------HHHHHHHHHHHHHHHHHHHhC
Q psy10669        189 AVFPSLQGGPHNHAIGAIATAMLQAQSDEF-----------KSYQAQVKANASHLSDEMIKR  239 (337)
Q Consensus       189 ~~~p~~~g~~~~~~iaala~a~~e~~~~~~-----------~~y~~~v~~na~~l~~~L~~~  239 (337)
                      -.++..   ..-..+|+|..+++.-..++.           .+-.+.+.+.|+.|...|...
T Consensus       238 l~Ralr---vdK~tla~L~atL~~Y~~~~~~~~~ip~l~ml~~~~~~L~~rA~~l~~~l~~~  296 (367)
T PF03841_consen  238 LGRALR---VDKLTLAALEATLRLYLDPDKAKEEIPTLRMLTQSLEELRARAERLAAQLKAA  296 (367)
T ss_dssp             HTTT-B-----HHHHHHHHHHHHH--------------------------------------
T ss_pred             CcceEe---eCHHHHHHHHHHHHHHHHhhccccccccccccccccccccccccccccccccc
Confidence            233322   334678888888876553111           122446666777777777764

3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.

>PRK05769 4-aminobutyrate aminotransferase; Provisional

Probab=97.54  E-value=0.0018  Score=64.96  Aligned_cols=157  Identities=14%  Similarity=0.156  Sum_probs=87.5

Q ss_pred             cEEEEcCcccc---cccC----hHHHHHHhhhcCCeEEEeccccccc--cc--------ee----eeecc--CCc----h
Q psy10669        125 DFLSSGTTCYS---RCLD----YARFRQICDETDSIMFADMSHISGL--IA--------GV----KGVTK--TGE----K  177 (337)
Q Consensus       125 klII~~~S~~~---~~~d----~~~l~eia~~~ga~l~vD~AH~~Gl--i~--------g~----~~T~~--~Gg----~  177 (337)
                      ..||+. ..++   +..+    +++++++|+++|+++++|+.|+ |+  .+        ++    ...+|  .||    .
T Consensus       223 aavi~E-pv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~t-G~gr~G~~~a~~~~gv~pDivt~~K~l~~G~p~ga  300 (441)
T PRK05769        223 AAIIVE-PIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQT-GMGRTGKMFAIEHFGVEPDIITLAKAIAGGLPLGA  300 (441)
T ss_pred             EEEEEC-cccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCcccceehhhccCCCCCEEEEcccccCCcccEE
Confidence            455554 3554   3345    7789999999999999999998 43  22        11    11112  123    2


Q ss_pred             hhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC--CEEecC-CCCCeE
Q psy10669        178 ILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG--YHVVTG-GTDVHL  252 (337)
Q Consensus       178 i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G--~~v~~~-~t~~h~  252 (337)
                      ++.  ++.+... .....++++ ++...++...++..+.  +  ...+++.++.++|++.|.+..  +.++.. .....+
T Consensus       301 v~~~~~i~~~~~-~~~~~T~~g-~p~~~aaa~a~L~~l~--~--~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~~  374 (441)
T PRK05769        301 VIGRAELMFLPP-GSHANTFGG-NPVAAAAALATLEELE--E--GLLENAQKLGEYLRKELKELKEKYEFIGDVRGLGLM  374 (441)
T ss_pred             EEEehhhhhcCC-CCCCCCCCc-CHHHHHHHHHHHHHHH--H--HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeecceEE
Confidence            222  3433222 122233443 5666666656665553  2  668889999999999998742  333321 112345


Q ss_pred             EEEEecCCC-----cchHHHHHHHhhcCceeccCc--ccchhhh
Q psy10669        253 ILIDLRKNK-----LTGSKVELVLEEIAIACNKNT--GISLAAE  289 (337)
Q Consensus       253 v~V~~~~~~-----~~~~~~~~~L~~~gI~v~~~~--girig~~  289 (337)
                      +.|.+....     .....+.+.|.+.||.+.+..  .+|+..+
T Consensus       375 ~~i~~~~~~~~~~~~~~~~~~~~~~~~Gil~~~~~~~~lr~~p~  418 (441)
T PRK05769        375 IGVELVKDRKEPDPKLRDKVLYEAFKRGLLLLGAGKSAIRIIPP  418 (441)
T ss_pred             EEEEeccCCccccHHHHHHHHHHHHhCCcEEecCCCCEEEEeCC
Confidence            555553321     012345566667799987532  5666543

>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]

Probab=97.48  E-value=0.0036  Score=61.21  Aligned_cols=172  Identities=13%  Similarity=0.054  Sum_probs=107.3

Q ss_pred             ccceeeec-------cCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCcc-chHHHHHHHHHHHHHhhcCCCCCCCcceee
Q psy10669         30 INGIELIA-------SENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGN-QFIDEIEIVAQQRSLKAFNLDPEQWGCNVQ  101 (337)
Q Consensus        30 ~~~i~l~a-------sen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~-~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~  101 (337)
                      ++-||++.       --+..+|++++++... .+.|.+  -  .++-++ ...+++=..+ +.++.++|++.     .+.
T Consensus        20 ~~viN~~G~v~~t~lG~s~~~~e~iea~~~~-~~~~v~--L--e~~l~~g~~~~R~~~~~-~~~~~~~~aea-----~~i   88 (395)
T COG1921          20 RRVINAIGTVLMTNLGRSLYSPEAIEAMKEA-MRAPVE--L--ETDLKTGKRGARLTELA-ELLCGLTGAEA-----AAI   88 (395)
T ss_pred             hhhhhhhhhheeccCCCccCCHHHHHHHHHH-hcccce--e--eeecccchhhHHHHHHH-HHHhcccchhh-----eee
Confidence            45566655       3345599999998765 333321  1  333333 3344443333 47778888886     456


Q ss_pred             cCCCchhHHHHHHhhCCc-------------------------------------------ccc---cccEEEEc-Cccc
Q psy10669        102 PYSGSPANFAVCEKALPT-------------------------------------------NNA---RFDFLSSG-TTCY  134 (337)
Q Consensus       102 ~~Sgt~AN~~v~~aLl~~-------------------------------------------~~a---~pklII~~-~S~~  134 (337)
                      ++..+.|.+.+..++.++                                           +.+   +++++.-- .++|
T Consensus        89 vnnn~aAVll~~~al~~~~EvVis~g~lV~gg~~~v~d~~~~aG~~l~EvG~tn~t~~~d~~~AIne~ta~llkV~s~~~  168 (395)
T COG1921          89 VNNNAAAVLLTLNALAEGKEVVVSRGELVEGGAFRVPDIIRLAGAKLVEVGTTNRTHLKDYELAINENTALLLKVHSSNY  168 (395)
T ss_pred             ECCcHHHHHHHHhhhccCCeEEEEccccccCCCCChhHHHHHcCCEEEEecccCcCCHHHHHHHhccCCeeEEEEeeccc
Confidence            666678888888888642                                           112   13333322 3556


Q ss_pred             ccccChH--HHHHHhhhcCCeEEEecccccccc-----------c-e---e-eeec-----cCCchhhh--hHHHHHhhc
Q psy10669        135 SRCLDYA--RFRQICDETDSIMFADMSHISGLI-----------A-G---V-KGVT-----KTGEKILY--DYEEKINNA  189 (337)
Q Consensus       135 ~~~~d~~--~l~eia~~~ga~l~vD~AH~~Gli-----------~-g---~-~~T~-----~~Gg~i~~--~l~~~i~~~  189 (337)
                      ++..++.  ++.+||+++|++++||.+-  |..           + |   | .|+.     |++|+|++  ++.+++++.
T Consensus       169 ~f~~~l~~~~l~~ia~~~~lpvivD~aS--g~~v~~e~~l~~~la~GaDLV~~SgdKllgGPqaGii~GkKelI~~lq~~  246 (395)
T COG1921         169 GFTGMLSEEELVEIAHEKGLPVIVDLAS--GALVDKEPDLREALALGADLVSFSGDKLLGGPQAGIIVGKKELIEKLQSH  246 (395)
T ss_pred             cccccccHHHHHHHHHHcCCCEEEecCC--ccccccccchhHHHhcCCCEEEEecchhcCCCccceEechHHHHHHHHhh
Confidence            7666655  4999999999999999994  332           1 2   2 3332     67999997  788877643


Q ss_pred             --cCCCCCCCCcHHHHHHHHHHHHHHhchh
Q psy10669        190 --VFPSLQGGPHNHAIGAIATAMLQAQSDE  217 (337)
Q Consensus       190 --~~p~~~g~~~~~~iaala~a~~e~~~~~  217 (337)
                        -|+.   -...+.+||+..+++....++
T Consensus       247 ~l~Ral---rv~K~tla~l~~aLe~y~~~~  273 (395)
T COG1921         247 PLKRAL---RVDKETLAALEAALELYLQPE  273 (395)
T ss_pred             hhhhhh---hcCcHhHHHHHHHHHHHcCch
Confidence              2332   234588999999998887654

>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]

Probab=97.47  E-value=0.0027  Score=62.42  Aligned_cols=194  Identities=15%  Similarity=0.183  Sum_probs=124.5

Q ss_pred             HHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhC----------------C-------c------------------
Q psy10669         81 AQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL----------------P-------T------------------  119 (337)
Q Consensus        81 ~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl----------------~-------~------------------  119 (337)
                      .++-+++.-|.+.    +.+||.+|.+.-.+-+..+-                +       |                  
T Consensus       114 Lq~~L~~ITG~Da----vsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPASAam~G~~VV~V~~~~~  189 (496)
T COG1003         114 LQEWLKEITGMDA----VSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPASAAMAGFKVVVVKCDEN  189 (496)
T ss_pred             HHHHHHHhcCCce----eeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChhhHhhcCceEEEEecCCC
Confidence            3467889999997    78999999886544444440                0       0                  


Q ss_pred             ---------ccc--c-ccEEEEcCcccc-cccChHHHHHHhhhcCCeEEEeccccccccc----e-----e-------ee
Q psy10669        120 ---------NNA--R-FDFLSSGTTCYS-RCLDYARFRQICDETDSIMFADMSHISGLIA----G-----V-------KG  170 (337)
Q Consensus       120 ---------~~a--~-pklII~~~S~~~-~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~----g-----~-------~~  170 (337)
                               .++  + -.+.|+.+|-.+ +.-|+.+|.+|.++.|..|++|.|..-++++    |     +       +|
T Consensus       190 G~VDlddLk~k~~~~~AalMiTnPsT~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~rPGd~G~DV~HlNLHKTF  269 (496)
T COG1003         190 GNVDLDDLRAKAEDNLAALMITNPSTLGVFEEDIREICEIVHEAGGQVYYDGANLNAIVGLARPGDMGFDVVHLNLHKTF  269 (496)
T ss_pred             CCccHHHHHHHhccceeEEEeccCcccccchhhHHHHHHHHHHcCCEEEecCcchhhhhccccccccccceEEeeccccc
Confidence                     111  1 346666688887 8999999999999999999999999998888    1     1       23


Q ss_pred             eccCC------chh-hh-hHHHHHhh----------c----------cCCCCCCCCcHHHHHHHHHHHHHHhchh-hHHH
Q psy10669        171 VTKTG------EKI-LY-DYEEKINN----------A----------VFPSLQGGPHNHAIGAIATAMLQAQSDE-FKSY  221 (337)
Q Consensus       171 T~~~G------g~i-~~-~l~~~i~~----------~----------~~p~~~g~~~~~~iaala~a~~e~~~~~-~~~y  221 (337)
                      +.|.|      |=| +. .|.+.+-.          .          +....+|+.....++   -+...++-++ .+.-
T Consensus       270 ~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~Gs~~il~~a---~~YI~~mG~~GL~~a  346 (496)
T COG1003         270 CIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYGSASILPIA---WAYIRMMGADGLKQA  346 (496)
T ss_pred             ccCCCCCCCCCCceehHhhccccCCCCcccCCCccccccCCCCccceeeccccCcchHHHHH---HHHHHHHhHHHHHHH
Confidence            33322      112 11 22221110          0          000113333333332   2222233223 3555


Q ss_pred             HHHHHHHHHHHHHHHHhCCCEEecCCC--CCeEEEEEec----CCCcchHHHHHHHhhcCceeccCc
Q psy10669        222 QAQVKANASHLSDEMIKRGYHVVTGGT--DVHLILIDLR----KNKLTGSKVELVLEEIAIACNKNT  282 (337)
Q Consensus       222 ~~~v~~na~~l~~~L~~~G~~v~~~~t--~~h~v~V~~~----~~~~~~~~~~~~L~~~gI~v~~~~  282 (337)
                      -+.-+-||+|++++|+. .|++...+.  .-|=.++|.+    ..|++..+++++|-.+|+......
T Consensus       347 se~AvLNANYia~rL~~-~y~~~y~~~~~~~HE~ild~r~l~~~~Gv~~~DvAKrLlD~GfHaPT~~  412 (496)
T COG1003         347 SEVAVLNANYIARRLKG-YYPVPYTGENRVAHECILDARPLKKETGVRALDVAKRLLDYGFHAPTMY  412 (496)
T ss_pred             HHHHHHhHHHHHHHhhh-cCccccCCCCcceeEEEeechHhHhhcCCcHHHHHHHHHhcCCCCCccc
Confidence            66778899999999987 577755333  5788899988    678999999999999999876433

>PRK09147 succinyldiaminopimelate transaminase; Provisional

Probab=97.40  E-value=0.046  Score=53.63  Aligned_cols=233  Identities=12%  Similarity=0.049  Sum_probs=123.0

Q ss_pred             cccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCC---CCCCcceeecC
Q psy10669         29 QINGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLD---PEQWGCNVQPY  103 (337)
Q Consensus        29 q~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~---~~~~~~~v~~~  103 (337)
                      .+..|.|...++..  ++.+++++...+...  ..|+-   ..|..   ++-....+.+.+.+|.+   ++   .+|..+
T Consensus        28 ~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~--~~Y~~---~~G~~---~lr~~ia~~~~~~~g~~~~~~~---~~i~it   96 (396)
T PRK09147         28 DLPPISLSIGEPKHPTPAFIKDALAANLDGL--ASYPT---TAGLP---ALREAIAAWLERRYGLPALDPA---TQVLPV   96 (396)
T ss_pred             CCCeEecCCCCCCCCCCHHHHHHHHHHhhhh--cCCCC---CCCCH---HHHHHHHHHHHHHhCCCcCCcc---ceEEEC
Confidence            45677777777644  777888886543211  11211   12222   22211112334445643   21   157777


Q ss_pred             CC-chhHHHHHHhhCCc--------------------------------------------cc-----ccccEEEEc-Cc
Q psy10669        104 SG-SPANFAVCEKALPT--------------------------------------------NN-----ARFDFLSSG-TT  132 (337)
Q Consensus       104 Sg-t~AN~~v~~aLl~~--------------------------------------------~~-----a~pklII~~-~S  132 (337)
                      +| +++...++.+++++                                            .+     .++|+|++. +.
T Consensus        97 ~G~~~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~~~~k~i~l~nP~  176 (396)
T PRK09147         97 NGSREALFAFAQTVIDRDGPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVWARTQLLFVCSPG  176 (396)
T ss_pred             CChHHHHHHHHHHHcCCCCCCCEEEEcCCCccchHHHHHhcCCEEEEeccCccccCccCHHHHHHHHhhccEEEEEcCCC
Confidence            88 56777777776421                                            01     026777764 42


Q ss_pred             c-cccccChHH---HHHHhhhcCCeEEEeccccccc----------c-----------c--eeeeec-c-------CCch
Q psy10669        133 C-YSRCLDYAR---FRQICDETDSIMFADMSHISGL----------I-----------A--GVKGVT-K-------TGEK  177 (337)
Q Consensus       133 ~-~~~~~d~~~---l~eia~~~ga~l~vD~AH~~Gl----------i-----------~--g~~~T~-~-------~Gg~  177 (337)
                      + .+...+-++   |.++|++++++|++|+++.--.          +           .  .+..|. |       +-|+
T Consensus       177 NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~  256 (396)
T PRK09147        177 NPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPGLRSGF  256 (396)
T ss_pred             CCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccccccCCccceeee
Confidence            2 246666555   4467789999999999975311          0           0  112222 2       2266


Q ss_pred             hhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEE
Q psy10669        178 ILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILI  255 (337)
Q Consensus       178 i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V  255 (337)
                      +++  ++.+.+..... ....+.+....++...++..  ....++.++++.++.+.+.+.|.+. +.+.. ...+-.+++
T Consensus       257 ~~~~~~l~~~~~~~~~-~~~~~~~~~~q~a~~~~~~~--~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~-p~~g~f~~~  331 (396)
T PRK09147        257 VAGDAALLKKFLLYRT-YHGCAMPPAVQAASIAAWND--EAHVRENRALYREKFDAVTPILAPV-LDVQL-PDAGFYLWA  331 (396)
T ss_pred             ecCCHHHHHHHHHHhh-hcccCCCHHHHHHHHHHhcc--hhHHHHHHHHHHHHHHHHHHHHHHh-cCCCC-CCeeEEEEE
Confidence            665  46555543221 11123333444443333321  2233556777777888888888764 44432 234556778


Q ss_pred             EecCCCcchHHHHHH-HhhcCceecc
Q psy10669        256 DLRKNKLTGSKVELV-LEEIAIACNK  280 (337)
Q Consensus       256 ~~~~~~~~~~~~~~~-L~~~gI~v~~  280 (337)
                      ++.   .+..++.+. |++.||.+.+
T Consensus       332 ~~~---~~~~~~~~~ll~~~gv~v~p  354 (396)
T PRK09147        332 KVP---GDDTEFARRLYADYNVTVLP  354 (396)
T ss_pred             ECC---CCHHHHHHHHHHhCCEEEeC
Confidence            876   234555555 4678998865

>PRK08354 putative aminotransferase; Provisional

Probab=97.39  E-value=0.041  Score=52.24  Aligned_cols=109  Identities=13%  Similarity=0.142  Sum_probs=63.4

Q ss_pred             cceeeeccCCCC-CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCc-hh
Q psy10669         31 NGIELIASENFT-SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGS-PA  108 (337)
Q Consensus        31 ~~i~l~asen~~-~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt-~A  108 (337)
                      .-|.|-..+|.. +|.+.+++...+. .. .++|         ....+    ++.+++.+|.       +|..++|+ +|
T Consensus         9 ~~i~l~~~~np~~p~~~~~a~~~~~~-~~-~~yp---------~~~~l----~~~ia~~~~~-------~I~vt~G~~~a   66 (311)
T PRK08354          9 GLIDFSASVNPYPPEWLDEMFERAKE-IS-GRYT---------YYEWL----EEEFSKLFGE-------PIVITAGITEA   66 (311)
T ss_pred             ceeEecCCCCCCCCHHHHHHHHHHHH-Hh-hcCC---------ChHHH----HHHHHHHHCC-------CEEECCCHHHH
Confidence            346666676777 7777788765422 21 1222         12334    3567777772       48888885 56


Q ss_pred             HHHHHHhhCCc----------------------------------ccc--ccc-EEEEcCcc-cccccChHHHH---HHh
Q psy10669        109 NFAVCEKALPT----------------------------------NNA--RFD-FLSSGTTC-YSRCLDYARFR---QIC  147 (337)
Q Consensus       109 N~~v~~aLl~~----------------------------------~~a--~pk-lII~~~S~-~~~~~d~~~l~---eia  147 (337)
                      ...+...+.+.                                  +.+  +++ +|++++++ -+...+.+++.   ++|
T Consensus        67 l~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~~l~~~~~~~~~vi~~~P~NPTG~~~~~~~l~~l~~~a  146 (311)
T PRK08354         67 LYLIGILALRDRKVIIPRHTYGEYERVARFFAARIIKGPNDPEKLEELVERNSVVFFCNPNNPDGKFYNFKELKPLLDAV  146 (311)
T ss_pred             HHHHHHhhCCCCeEEEeCCCcHHHHHHHHHcCCEEeecCCCHHHHHHhhcCCCEEEEecCCCCCCCccCHHHHHHHHHHh
Confidence            54444433321                                  101  244 44555543 24666666655   567


Q ss_pred             hhcCCeEEEecccc
Q psy10669        148 DETDSIMFADMSHI  161 (337)
Q Consensus       148 ~~~ga~l~vD~AH~  161 (337)
                      +++|+++++|+++.
T Consensus       147 ~~~~~~li~De~y~  160 (311)
T PRK08354        147 EDRNALLILDEAFI  160 (311)
T ss_pred             hhcCcEEEEeCcch
Confidence            88999999999983

>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional

Probab=97.37  E-value=0.036  Score=56.69  Aligned_cols=153  Identities=15%  Similarity=0.084  Sum_probs=80.3

Q ss_pred             ccEEEE-cCcc-cccccC---hHHHHHHhhhcCCeEEEecccc----ccc--cc---------ee-eeec-c-------C
Q psy10669        124 FDFLSS-GTTC-YSRCLD---YARFRQICDETDSIMFADMSHI----SGL--IA---------GV-KGVT-K-------T  174 (337)
Q Consensus       124 pklII~-~~S~-~~~~~d---~~~l~eia~~~ga~l~vD~AH~----~Gl--i~---------g~-~~T~-~-------~  174 (337)
                      +|+|++ .+++ .+...+   +++|.++|+++|+++++|+++.    -|.  ..         .+ .++. |       +
T Consensus       282 ~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~~S~SK~~~~~G~R  361 (517)
T PRK13355        282 TKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGLSKSHMIAGYR  361 (517)
T ss_pred             ceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEEecchhhccCcccc
Confidence            566654 4533 246666   5566678899999999999853    121  11         11 1222 2       2


Q ss_pred             Cchhh--h--h----HHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHH---HHHHHHHHHHHHHHHhC-CCE
Q psy10669        175 GEKIL--Y--D----YEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQ---AQVKANASHLSDEMIKR-GYH  242 (337)
Q Consensus       175 Gg~i~--~--~----l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~---~~v~~na~~l~~~L~~~-G~~  242 (337)
                      -|+++  .  +    +.+.++....  ...+++.+...+...++..-  ..++++.   .++.++-+++.+.|.+. |++
T Consensus       362 iG~~i~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~q~a~~~aL~~~--~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~  437 (517)
T PRK13355        362 IGWMILSGNKRIAKDYIEGLNMLAN--MRLCSNVPAQSIVQTALGGH--QSVKDYLVPGGRVYEQRELVYNALNAIPGIS  437 (517)
T ss_pred             eEEEEeeCchhhHHHHHHHHHHHhc--CcCCcChHHHHHHHHHhcCC--ccHHHHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence            25554  2  2    2333332111  11234445555555555321  1122222   34555667788888775 887


Q ss_pred             EecCCCCCeEEEEEecCCC----cchHHHHHHHhhcCceeccC
Q psy10669        243 VVTGGTDVHLILIDLRKNK----LTGSKVELVLEEIAIACNKN  281 (337)
Q Consensus       243 v~~~~t~~h~v~V~~~~~~----~~~~~~~~~L~~~gI~v~~~  281 (337)
                      +... .-+-.+++++....    -+...+.+.|++.||.+.+-
T Consensus       438 ~~~p-~g~fy~~~~l~~~~~~~~~~~~~~~~ll~~~gV~v~pg  479 (517)
T PRK13355        438 AVKP-KAAFYIFPKIDVKKFNIHDDEQFALDLLHDKKVLIVQG  479 (517)
T ss_pred             cCCC-CeeeEEEeecCcccCCCCCHHHHHHHHHHhCCEEEeCc
Confidence            7642 23445555664321    13345667788899998763

>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated

Probab=97.37  E-value=0.0018  Score=64.60  Aligned_cols=158  Identities=15%  Similarity=0.148  Sum_probs=87.6

Q ss_pred             cEEEEcCcccccc-------cChHHHHHHhhhcCCeEEEeccccccc--cc--------e----eeeecc--CC-ch---
Q psy10669        125 DFLSSGTTCYSRC-------LDYARFRQICDETDSIMFADMSHISGL--IA--------G----VKGVTK--TG-EK---  177 (337)
Q Consensus       125 klII~~~S~~~~~-------~d~~~l~eia~~~ga~l~vD~AH~~Gl--i~--------g----~~~T~~--~G-g~---  177 (337)
                      ..||+. .++++.       ..+++|+++|+++|++||+|+.|+ |+  .+        +    +....|  .+ |+   
T Consensus       200 aavi~E-pv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t-G~GrtG~~~~~~~~~v~PDi~t~~K~l~~~G~pig  277 (425)
T PRK09264        200 AAVIVE-TVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQA-GCGRTGTFFSFERAGITPDIVTLSKSISGYGLPMA  277 (425)
T ss_pred             EEEEEe-cccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhh-CCccccHHHHHhhcCCCCCEEEeccccCCCccceE
Confidence            356665 355432       246678899999999999999997 32  11        1    111123  12 32   


Q ss_pred             -hhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCE--EecCCCCC
Q psy10669        178 -ILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYH--VVTGGTDV  250 (337)
Q Consensus       178 -i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~--v~~~~t~~  250 (337)
                       ++.  ++ ..+.......++ +.|+...++...++.++.+  -.++.+++.++.++|.++|++.  .+.  +.......
T Consensus       278 av~~~~~i-~~~~~~~~~~T~-~gnp~~~aaa~a~l~~~~~--~~~l~~~~~~~g~~l~~~l~~l~~~~~~~~~~vrg~G  353 (425)
T PRK09264        278 LVLIKPEL-DVWKPGEHNGTF-RGNNLAFVTATAALEEYWS--DDAFEKEVKAKGELVRERLEEIAAKYPGLGAEVRGRG  353 (425)
T ss_pred             EEEEchhh-hccCCCccCCCC-CCCHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHHHHHHHHhCCCceecceecc
Confidence             222  33 222222222223 2445556655455534432  2367888888889998888762  222  11111245


Q ss_pred             eEEEEEecCCCcchHHHHHHHhhcCceeccCc----ccchhhh
Q psy10669        251 HLILIDLRKNKLTGSKVELVLEEIAIACNKNT----GISLAAE  289 (337)
Q Consensus       251 h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~----girig~~  289 (337)
                      .+..|.+.+.. ....+.+.|.+.||.+.+..    .||+..+
T Consensus       354 l~~~i~l~~~~-~~~~l~~~~~~~Gv~~~~~~~~~~~lr~~p~  395 (425)
T PRK09264        354 MMQGIDFGDGE-LAGKIAAEAFENGLIIETSGPEDEVVKLLPP  395 (425)
T ss_pred             cEEEEEecChH-HHHHHHHHHHHCCCEEeccCCCCCEEEEeCC
Confidence            56677775433 34566677777899986532    4666544

>KOG0257|consensus

Probab=97.36  E-value=0.008  Score=58.83  Aligned_cols=181  Identities=16%  Similarity=0.090  Sum_probs=104.0

Q ss_pred             HHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHhhCCc-----------------------------------------
Q psy10669         82 QQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEKALPT-----------------------------------------  119 (337)
Q Consensus        82 ~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~aLl~~-----------------------------------------  119 (337)
                      ++..++++|....-= -+|..++| +++....+.+++.+                                         
T Consensus        79 ~k~~se~~~~~~~~~-~eVlVT~GA~~ai~~~~~~l~~~GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~  157 (420)
T KOG0257|consen   79 AKAYSEFYGGLLDPD-DEVLVTAGANEAISSALLGLLNPGDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSD  157 (420)
T ss_pred             HHHHHHHhccccCCc-ccEEEecCchHHHHHHHHHHcCCCCEEEEecCcchhhhhHHhhcCCcceeeccccccccccCcc
Confidence            356677777431100 14888888 67888778888764                                         


Q ss_pred             --------ccc---cccEEEEc-Ccc-----cccccChHHHHHHhhhcCCeEEEeccc------------cccccce---
Q psy10669        120 --------NNA---RFDFLSSG-TTC-----YSRCLDYARFRQICDETDSIMFADMSH------------ISGLIAG---  167 (337)
Q Consensus       120 --------~~a---~pklII~~-~S~-----~~~~~d~~~l~eia~~~ga~l~vD~AH------------~~Gli~g---  167 (337)
                              +.+   |+|+||+. +.+     |++.. +++|++||+++|.+++.|+.=            ++.+ +|   
T Consensus       158 ~~~D~~~le~~~t~kTk~Ii~ntPhNPtGkvfsRee-Le~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~asl-Pgm~e  235 (420)
T KOG0257|consen  158 WTLDPEELESKITEKTKAIILNTPHNPTGKVFSREE-LERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASL-PGMYE  235 (420)
T ss_pred             ccCChHHHHhhccCCccEEEEeCCCCCcCcccCHHH-HHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecC-Cchhh
Confidence                    111   37877765 433     33332 556789999999999999762            1233 22   


Q ss_pred             ----ee-------eeccCCchhhh--hH----HHHHhhccCCCCCCCCcHHHHHHHHHHHHHHh---chh---h-HHHHH
Q psy10669        168 ----VK-------GVTKTGEKILY--DY----EEKINNAVFPSLQGGPHNHAIGAIATAMLQAQ---SDE---F-KSYQA  223 (337)
Q Consensus       168 ----~~-------~T~~~Gg~i~~--~l----~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~---~~~---~-~~y~~  223 (337)
                          +.       .||=+=|.+++  .+    ..-.++.+|+     ...+...|.++++..-+   +++   + .++.+
T Consensus       236 rtitvgS~gKtf~~TGWrlGW~igp~~L~~~~~~vh~~~~~~-----~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~  310 (420)
T KOG0257|consen  236 RTITVGSFGKTFGVTGWRLGWAIGPKHLYSALFPVHQNFVFT-----CPTPIQEASAAAFALELACLQPGGSYFITELVK  310 (420)
T ss_pred             eEEEeccccceeeeeeeeeeeeechHHhhhhHHHHhhccccc-----cCcHHHHHHHHHHhhhhhccCCcchhHHHHHHH
Confidence                11       12222244443  12    2222233342     23344444444443322   222   2 34778


Q ss_pred             HHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHh
Q psy10669        224 QVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLE  272 (337)
Q Consensus       224 ~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~  272 (337)
                      ...+|-+.|++.|.+.|+++.. +....-+++|++... +.......++
T Consensus       311 ~y~~krdil~k~L~~lg~~v~~-p~gayyl~adfs~~~-~~~~~~~~~~  357 (420)
T KOG0257|consen  311 EYKEKRDILAKALEELGLKVTG-PEGAYYLWADFSLAK-SWPFFEEILE  357 (420)
T ss_pred             HHHHHHHHHHHHHHhcCCcccc-CCCceEEEEeccccc-cCCcchhhcc
Confidence            8899999999999999999985 355778889988322 3333344443

>PLN02231 alanine transaminase

Probab=97.35  E-value=0.099  Score=53.86  Aligned_cols=156  Identities=11%  Similarity=0.133  Sum_probs=80.5

Q ss_pred             ccE-EEEcCcc-cccccChHH---HHHHhhhcCCeEEEecccccccc-------c--------e-------ee---e---
Q psy10669        124 FDF-LSSGTTC-YSRCLDYAR---FRQICDETDSIMFADMSHISGLI-------A--------G-------VK---G---  170 (337)
Q Consensus       124 pkl-II~~~S~-~~~~~d~~~---l~eia~~~ga~l~vD~AH~~Gli-------~--------g-------~~---~---  170 (337)
                      ||+ +++++.+ -+...+.++   |.++|+++|++|+.|+++.-=..       .        |       +.   |   
T Consensus       272 ~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK  351 (534)
T PLN02231        272 VRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSK  351 (534)
T ss_pred             eEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCc
Confidence            454 5555544 246666665   55778999999999998742111       0        0       11   1   


Q ss_pred             -----eccCCchhhh-----hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHH--hchhhH-------HHHHHHHHHHHH
Q psy10669        171 -----VTKTGEKILY-----DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQA--QSDEFK-------SYQAQVKANASH  231 (337)
Q Consensus       171 -----T~~~Gg~i~~-----~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~--~~~~~~-------~y~~~v~~na~~  231 (337)
                           +|-++|++..     ++.+.+....... .++ +....++...++..-  .+..|+       ..++.+.++.+.
T Consensus       352 ~~~g~pGlRiGy~~~~~~~~~l~~~l~k~~~~~-~~s-~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~  429 (534)
T PLN02231        352 GYYGECGKRGGYMEVTGFTSDVREQIYKVASVN-LCS-NISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKT  429 (534)
T ss_pred             ccccCCccceEEEEEecCCHHHHHHHHHHHhhh-cCC-ChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence                 1224577642     4555554432222 222 233333333333100  001222       235678889999


Q ss_pred             HHHHHHhC-CCEEecCCCCCeEEEEEecCC--Cc---------chHH-HHHHHhhcCceeccCc
Q psy10669        232 LSDEMIKR-GYHVVTGGTDVHLILIDLRKN--KL---------TGSK-VELVLEEIAIACNKNT  282 (337)
Q Consensus       232 l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~--~~---------~~~~-~~~~L~~~gI~v~~~~  282 (337)
                      +.+.|.+. |+.+... .-+-.+++++.-.  .+         .... ...+|++.||.+.+-.
T Consensus       430 l~~~L~~~~gi~~~~p-~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs  492 (534)
T PLN02231        430 LEDALNSLEGVTCNKA-EGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGS  492 (534)
T ss_pred             HHHHHhcCCCceecCC-CeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCc
Confidence            99999885 8877541 2344445344311  11         1112 2445667899988754

>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type

Probab=97.31  E-value=0.0027  Score=64.15  Aligned_cols=158  Identities=11%  Similarity=0.056  Sum_probs=88.6

Q ss_pred             cEEEEcCcccc---cccC----hHHHHHHhhhcCCeEEEecccc-ccccc--------eee-----ee-cc---CCchhh
Q psy10669        125 DFLSSGTTCYS---RCLD----YARFRQICDETDSIMFADMSHI-SGLIA--------GVK-----GV-TK---TGEKIL  179 (337)
Q Consensus       125 klII~~~S~~~---~~~d----~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g~~-----~T-~~---~Gg~i~  179 (337)
                      ..||+. ...+   ...+    ++.++++|+++|++||+|+.|+ .|-.+        |+.     .| +|   .||+++
T Consensus       253 AAvI~E-Pv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~~~PDi~t~gK~lg~gG~~~  331 (464)
T TIGR00699       253 AAIIVE-PIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATGKFWAHEHWNLDDPPDMVTFSKKFQTAGYFF  331 (464)
T ss_pred             EEEEEe-CCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeeeCCCCCcchhHHHhcCCCCCCCEEEehhhhccCCccc
Confidence            456665 3543   3444    6679999999999999999994 23222        121     12 23   146544


Q ss_pred             hhHHHHHhh--ccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC--CE-Eec---CCCCCe
Q psy10669        180 YDYEEKINN--AVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG--YH-VVT---GGTDVH  251 (337)
Q Consensus       180 ~~l~~~i~~--~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G--~~-v~~---~~t~~h  251 (337)
                      ..  +.+.+  ..+-+.+-+.|+...|+..++++.+.+   +...+++.+..++|.+.|.+..  +. ++.   +.....
T Consensus       332 ~~--~~~~~~~~~~~~~T~~gnp~~~aaa~a~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Gl  406 (464)
T TIGR00699       332 HD--PAFRPNKPYRQFNTWMGDPSRALILREIIQEIKR---KDLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGT  406 (464)
T ss_pred             cc--hhccCCCCcccccCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEE
Confidence            31  11221  111111224555566666556666543   2566777777788888887732  43 222   114566


Q ss_pred             EEEEEecCCCcchHHHHHHHhhcCceeccCc--ccchhhh
Q psy10669        252 LILIDLRKNKLTGSKVELVLEEIAIACNKNT--GISLAAE  289 (337)
Q Consensus       252 ~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~--girig~~  289 (337)
                      ++.|.+.+.. ....+.+.|.+.|+.+....  -|||.-+
T Consensus       407 m~gie~~~~~-~~~~i~~~~~~~Gvl~~~~g~~~ir~~Pp  445 (464)
T TIGR00699       407 FIAWDTPDEA-KRDKLLKKARNNGVNIGGCGVKAIRLRPM  445 (464)
T ss_pred             EEEEecCCHH-HHHHHHHHHHHCCcEEecCCCCeEEEeCC
Confidence            7777764322 23455566666799997642  4666533

Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.

>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria []

Probab=97.26  E-value=0.017  Score=55.92  Aligned_cols=181  Identities=19%  Similarity=0.162  Sum_probs=93.8

Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCccee--ecCCCchhHHHHHHhhCCc---------------------------------
Q psy10669         75 DEIEIVAQQRSLKAFNLDPEQWGCNV--QPYSGSPANFAVCEKALPT---------------------------------  119 (337)
Q Consensus        75 ~~lE~~~~~~~a~lfg~~~~~~~~~v--~~~Sgt~AN~~v~~aLl~~---------------------------------  119 (337)
                      |.||    +.-++.||+|+    +-|  |+.|||+|...++.++++|                                 
T Consensus        57 d~le----~iyA~vfgaE~----ALVRpq~vSGTHAi~~~Lfg~LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~G  128 (403)
T PF06838_consen   57 DKLE----RIYADVFGAED----ALVRPQFVSGTHAIALALFGVLRPGDELLSITGKPYDTLEEVIGIRGNGPGSLKEFG  128 (403)
T ss_dssp             HHHH----HHHHHHCT-SE----EEEETTS-SHHHHHHHHHHHH--TT-EEEESSSS--CCHHHHHTSSSSSSSSTGGGT
T ss_pred             HHHH----HHHHHHhCchh----hhhcccccchHHHHHHHHHhcCCCCCeEEEcCCCchhhHHHHhCCCCCCCCChHHhC
Confidence            5677    35689999998    445  4589999998889999876                                 


Q ss_pred             -------------------ccc---cccEEEEcCcc-cc--cccChHHHHHHhhh---c--CCeEEEeccccc-------
Q psy10669        120 -------------------NNA---RFDFLSSGTTC-YS--RCLDYARFRQICDE---T--DSIMFADMSHIS-------  162 (337)
Q Consensus       120 -------------------~~a---~pklII~~~S~-~~--~~~d~~~l~eia~~---~--ga~l~vD~AH~~-------  162 (337)
                                         +.+   ++|+|.+--|- |+  ....+++|+++++.   .  +++++||-+=+=       
T Consensus       129 i~Y~~v~L~~dg~~D~~~i~~~~~~~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~~EP  208 (403)
T PF06838_consen  129 IKYREVPLTEDGTIDWEAIKKALKPNTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVETQEP  208 (403)
T ss_dssp             -EEEE--B-TTSSB-HHHHHHHHHTTEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSSS-G
T ss_pred             ceeEEEeecCCCCcCHHHHHHhhccCceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceeccccCc
Confidence                               101   26888886433 54  45667777776643   3  889999988210       


Q ss_pred             cccc--eeeeec---------cCCchhhh--hHHHHHh-hccCCCCC--CCCcHHHHHHHHHHHHHHhchhhHHHHHHHH
Q psy10669        163 GLIA--GVKGVT---------KTGEKILY--DYEEKIN-NAVFPSLQ--GGPHNHAIGAIATAMLQAQSDEFKSYQAQVK  226 (337)
Q Consensus       163 Gli~--g~~~T~---------~~Gg~i~~--~l~~~i~-~~~~p~~~--g~~~~~~iaala~a~~e~~~~~~~~y~~~v~  226 (337)
                      .-++  -+.+..         |.||+|++  +|.++.- +-.-|++.  .++.....=.+.-++-.  .   +....+-+
T Consensus       209 ~~vGADl~aGSLIKNpGGgiAptGGYIaGr~~lVe~~a~RLTaPGiG~e~G~t~~~~R~~~QGlFl--A---P~vV~eAl  283 (403)
T PF06838_consen  209 TEVGADLMAGSLIKNPGGGIAPTGGYIAGRKDLVERAAYRLTAPGIGKEVGATLGTNRLMFQGLFL--A---PHVVGEAL  283 (403)
T ss_dssp             GGGT-SEEEEETTSGGGTTT-SS-EEEEESHHHHHHHHHHHS-TTTGGGSS--TTTHHHHHHHHHH--H---HHHHHHHH
T ss_pred             cccchhheeccceeCCCCCccCcCCEEechHHHHHHHHhhhcCCccccccccCcchHHHHHhHHhh--c---hHHHHHHH
Confidence            1111  122221         56899987  6766544 33457772  12211111111122111  1   23345556


Q ss_pred             HHHHHHHHHHHhCCCEEecCCCCCe---EEEEEecCCCcchHHHHHHHh
Q psy10669        227 ANASHLSDEMIKRGYHVVTGGTDVH---LILIDLRKNKLTGSKVELVLE  272 (337)
Q Consensus       227 ~na~~l~~~L~~~G~~v~~~~t~~h---~v~V~~~~~~~~~~~~~~~L~  272 (337)
                      +-+-..+.-+.+.||+|.....+.+   +..|.+++    ...+-..|+
T Consensus       284 Kgaif~A~~fe~lG~~v~P~~~~~R~DiIQai~l~~----~e~l~~FC~  328 (403)
T PF06838_consen  284 KGAIFAAALFEKLGFEVSPKPDDPRSDIIQAIELGS----PEKLIAFCQ  328 (403)
T ss_dssp             HHHHHHHHHHHHTT-EEES-TTS--SSS-EEEE-SS----HHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCcCCCCCCCCCCceEEEEECCC----HHHHHHHHH
Confidence            6677777788889999987433322   55566653    445555555

; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.

>PRK05639 4-aminobutyrate aminotransferase; Provisional

Probab=97.21  E-value=0.0035  Score=63.24  Aligned_cols=144  Identities=10%  Similarity=0.148  Sum_probs=77.5

Q ss_pred             hHHHHHHhhhcCCeEEEeccccccccc--e-------------eeeecc-------CCchhhh-hHHHHHhhccCCCCCC
Q psy10669        140 YARFRQICDETDSIMFADMSHISGLIA--G-------------VKGVTK-------TGEKILY-DYEEKINNAVFPSLQG  196 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~~Gli~--g-------------~~~T~~-------~Gg~i~~-~l~~~i~~~~~p~~~g  196 (337)
                      +++++++|+++|++||+|+.|+ |+ +  |             +...+|       -|+++.. ++.+......+ +++ 
T Consensus       245 l~~l~~lc~~~g~llI~DEv~t-G~-GrtG~~~a~~~~gv~PDiv~~gK~l~gG~pi~av~~~~~i~~~~~~~~~-~T~-  320 (457)
T PRK05639        245 FKELKKLLDEHGILLVMDEVQT-GI-GRTGKWFASEWFEVKPDLIIFGKGVASGMGLSGVIGRKELMDLTSGSAL-LTP-  320 (457)
T ss_pred             HHHHHHHHHHcCCEEEEechhh-cc-CcCchHHHHHhcCCCCCEEEechhhcCCCcceeEEehHHHHhhcCCCcc-cCC-
Confidence            4468899999999999999997 63 2  1             011122       1222222 44442211111 223 


Q ss_pred             CCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh--CCCEEecC-CCCCeEEEEEecCC-Cc----chHHHH
Q psy10669        197 GPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK--RGYHVVTG-GTDVHLILIDLRKN-KL----TGSKVE  268 (337)
Q Consensus       197 ~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~--~G~~v~~~-~t~~h~v~V~~~~~-~~----~~~~~~  268 (337)
                      +.|+...|+..+++..+.+   +...+++.+..++|.+.|++  .++.++.. -...-++-+.+... ..    ....+.
T Consensus       321 ~g~p~~~aaa~a~l~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~VrG~Gl~~gve~~~~~~~~~~~~~~~~~  397 (457)
T PRK05639        321 AANPVISAAAEATLEIIEE---ENLLKNALKVGEFIKKRLLEMKESFEVIGDVRGKGLMIGVEIVKENGKPDPELTGKIC  397 (457)
T ss_pred             CcCHHHHHHHHHHHHHHHH---ccHHHHHHHHHHHHHHHHHHHHHhCCCEEeeccceeEEEEEEecCCCCCCHHHHHHHH
Confidence            3455555555555555533   35678888899999999987  34444320 01122333333221 10    123455


Q ss_pred             HHHhhcCceeccC----cccchhhhh
Q psy10669        269 LVLEEIAIACNKN----TGISLAAEI  290 (337)
Q Consensus       269 ~~L~~~gI~v~~~----~girig~~~  290 (337)
                      +.|.+.|+.+...    .-|||.-+.
T Consensus       398 ~~~~~~Gv~~~~~g~~~~~lr~~Ppl  423 (457)
T PRK05639        398 WRAFELGLILPSYGMFGNVIRITPPL  423 (457)
T ss_pred             HHHHhCCeEEeecCCCCCEEEEeCCC
Confidence            5566679999753    256665443

>PLN02672 methionine S-methyltransferase

Probab=97.17  E-value=0.067  Score=59.09  Aligned_cols=236  Identities=13%  Similarity=0.080  Sum_probs=131.9

Q ss_pred             ccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCch
Q psy10669         30 INGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSP  107 (337)
Q Consensus        30 ~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~  107 (337)
                      ...|.|...||..  ||.|++++...+. ++..       +.|....  -+.+ ++.+++.+|.+.... -+|..++|+.
T Consensus       697 ~~vI~LsinE~d~ppPp~V~eAi~eal~-~~~~-------s~g~pdl--r~aL-a~~la~~~Gv~~d~~-e~IIvt~Gs~  764 (1082)
T PLN02672        697 SSLIHMDVDESFLPVPSAVKASIFESFV-RQNI-------SESETDP--RPSI-LQFIKSNYGFPTDSC-TEFVYGDTSL  764 (1082)
T ss_pred             CCEEEEeCCCCCCCCCHHHHHHHHHHHh-hcCC-------CCCChHH--HHHH-HHHHHHHhCcCCCCC-CEEEEeCCHH
Confidence            3568898888887  8999999876543 2211       1122111  1222 246677778764210 1488888864


Q ss_pred             -hHHHHHHhhCCc--------------------------------------------cccc----ccEEEEcCccc--cc
Q psy10669        108 -ANFAVCEKALPT--------------------------------------------NNAR----FDFLSSGTTCY--SR  136 (337)
Q Consensus       108 -AN~~v~~aLl~~--------------------------------------------~~a~----pklII~~~S~~--~~  136 (337)
                       +...++.+++++                                            +..+    +.++++++..+  +.
T Consensus       765 elL~lll~aLl~pGD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~~~~~I~L~nPnhNPTG~  844 (1082)
T PLN02672        765 ALFNKLVLCCVQEGGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETVKKPWVYISGPTINPTGL  844 (1082)
T ss_pred             HHHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCCCEEEEECcCCCCcCc
Confidence             555667888654                                            0011    24667766423  46


Q ss_pred             ccChHHHH---HHhhhcCCeEEEecccc----cc-------ccc------------e--eeeec-c-------CCchhhh
Q psy10669        137 CLDYARFR---QICDETDSIMFADMSHI----SG-------LIA------------G--VKGVT-K-------TGEKILY  180 (337)
Q Consensus       137 ~~d~~~l~---eia~~~ga~l~vD~AH~----~G-------li~------------g--~~~T~-~-------~Gg~i~~  180 (337)
                      ..+-+++.   ++|+++|+++++|+++.    .|       +..            .  +.+|. |       +-|++++
T Consensus       845 v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylIa  924 (1082)
T PLN02672        845 LYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLAL  924 (1082)
T ss_pred             cCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHheeEEe
Confidence            66666554   67899999999999985    22       110            0  11222 1       2355554


Q ss_pred             ---hHHHHHhhccCCCCCCCCcH-HHHHHHH-HHHHHHh----chhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCe
Q psy10669        181 ---DYEEKINNAVFPSLQGGPHN-HAIGAIA-TAMLQAQ----SDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVH  251 (337)
Q Consensus       181 ---~l~~~i~~~~~p~~~g~~~~-~~iaala-~a~~e~~----~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h  251 (337)
                         ++.+.+...  +... +++. ...++.+ .++.+-.    ....+++++.+.++.+++.+.|.+.|+++..+ .-+-
T Consensus       925 p~~eLi~~l~~~--~~~s-~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~Gi~v~~P-eGGF 1000 (1082)
T PLN02672        925 NDSVLIDAFHSA--PGLS-RPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEACGWDVLEP-QGGI 1000 (1082)
T ss_pred             CCHHHHHHHHHh--hhhc-CCCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHCCCeEecC-CcEE
Confidence               266666542  1222 2222 2222211 1111100    12335667778999999999999999987642 2345


Q ss_pred             EEEEEecC----------------CCcchHHHHHHHh-hcCceeccC
Q psy10669        252 LILIDLRK----------------NKLTGSKVELVLE-EIAIACNKN  281 (337)
Q Consensus       252 ~v~V~~~~----------------~~~~~~~~~~~L~-~~gI~v~~~  281 (337)
                      .++++++.                .+.+..++.+.|. +.||.+++-
T Consensus      1001 fLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PG 1047 (1082)
T PLN02672       1001 SMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSS 1047 (1082)
T ss_pred             EEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecC
Confidence            55665431                0235566666665 579999873

>PLN02450 1-aminocyclopropane-1-carboxylate synthase

Probab=97.17  E-value=0.04  Score=55.68  Aligned_cols=161  Identities=7%  Similarity=0.038  Sum_probs=87.6

Q ss_pred             ccEEEEc-Ccc-cccccChHHHH---HHhhhcCCeEEEeccccc----c--c---c-------------c---eeeeec-
Q psy10669        124 FDFLSSG-TTC-YSRCLDYARFR---QICDETDSIMFADMSHIS----G--L---I-------------A---GVKGVT-  172 (337)
Q Consensus       124 pklII~~-~S~-~~~~~d~~~l~---eia~~~ga~l~vD~AH~~----G--l---i-------------~---g~~~T~-  172 (337)
                      +|+|++. +++ .+...+.+++.   ++|+++|+++++|++..-    +  .   +             .   .+..|. 
T Consensus       192 ~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~S  271 (468)
T PLN02450        192 VKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLS  271 (468)
T ss_pred             eeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEecc
Confidence            5655554 544 24667666555   667899999999998652    1  1   0             0   012222 


Q ss_pred             c-------CCchhhh--h-HHHHHhhccCCCCCCCCcHHHHHHHHHHHHHH--hchhhHHHHHHHHHHHHHHHHHHHhCC
Q psy10669        173 K-------TGEKILY--D-YEEKINNAVFPSLQGGPHNHAIGAIATAMLQA--QSDEFKSYQAQVKANASHLSDEMIKRG  240 (337)
Q Consensus       173 ~-------~Gg~i~~--~-l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~--~~~~~~~y~~~v~~na~~l~~~L~~~G  240 (337)
                      |       +-|++++  + +.+.+... .+.  +..+.+...+++..+..-  .....++.++++.+.-+.+.+.|.+.|
T Consensus       272 K~~~l~GlRiG~li~~~~~l~~~~~~~-~~~--~~~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~g  348 (468)
T PLN02450        272 KDLGLPGFRVGAIYSNDEMVVSAATKM-SSF--GLVSSQTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAAG  348 (468)
T ss_pred             ccCCCCCccEEEEEECCHHHHHHHHHH-hhc--CCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            2       2356654  2 34444332 121  223344444444444221  001235567888888888999999999


Q ss_pred             CEEecCCCCCeEEEEEecCCC----cc--hHHHHHHHhhcCceeccCc--------ccchhh
Q psy10669        241 YHVVTGGTDVHLILIDLRKNK----LT--GSKVELVLEEIAIACNKNT--------GISLAA  288 (337)
Q Consensus       241 ~~v~~~~t~~h~v~V~~~~~~----~~--~~~~~~~L~~~gI~v~~~~--------girig~  288 (337)
                      +.+... ..+--++++++..-    +.  ...+.+.|++.||.+.+-.        .+||+.
T Consensus       349 i~~~~~-~~g~flwi~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f  409 (468)
T PLN02450        349 IKCLKS-NAGLFCWVDMRHLLKSNTFEAEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVCF  409 (468)
T ss_pred             CcccCC-CceEEEEEEchHhcCcCCchHHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEEe
Confidence            876542 23445678875321    11  1123344567899997643        577753

>PRK07678 aminotransferase; Validated

Probab=97.11  E-value=0.0056  Score=61.61  Aligned_cols=137  Identities=15%  Similarity=0.134  Sum_probs=78.3

Q ss_pred             hHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeecc--CCch------hhh-hHHHHHhhc-----cC-
Q psy10669        140 YARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTK--TGEK------ILY-DYEEKINNA-----VF-  191 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~--~Gg~------i~~-~l~~~i~~~-----~~-  191 (337)
                      +++++++|+++|++||+|+-|+ .|-.+        |    ++..+|  .||+      +.. ++.+.+...     .+ 
T Consensus       236 l~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~gv~PDivt~gK~lggG~~Pi~av~~~~~i~~~~~~~~~~~~~~h  315 (451)
T PRK07678        236 MKAVKEICQKHGALLISDEVICGFGRTGKAFGFMNYGVKPDIITMAKGITSAYLPLSATAVKKEIYEAFKGKGEYEHFRH  315 (451)
T ss_pred             HHHHHHHHHHcCCEEEEeehhhcCCcCchhHHHHhcCCCCCEEEeecccccCCcceeEEEEcHHHHHHHhccCccccccc
Confidence            5678899999999999999984 56555        1    122223  2453      222 455555421     11 


Q ss_pred             CCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCEEec-CCCCCeEEEEEecCCC-------
Q psy10669        192 PSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYHVVT-GGTDVHLILIDLRKNK-------  261 (337)
Q Consensus       192 p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~v~~-~~t~~h~v~V~~~~~~-------  261 (337)
                      .+++ +.|+...|+..+++..+.+ +  ...+++.+..++|.+.|.+.  .+.++. --....++.|.+....       
T Consensus       316 ~~T~-~gnp~~~aaa~a~l~~l~~-~--~~~~~~~~~g~~l~~~l~~~~~~~~~v~~vrg~Gl~~~i~~~~~~~~~~~~~  391 (451)
T PRK07678        316 VNTF-GGNPAACALALKNLEIMEN-E--NLIERSAQLGELLLEQLKEELGEHPLVGDIRGKGLLVGIELVNDKETKEPAD  391 (451)
T ss_pred             CCCC-CcCHHHHHHHHHHHHHHHh-C--CHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEeeceEEEEEEecCCcccCcCc
Confidence            1223 4566666666666666643 2  56788999999999888652  222221 0023344555553211       


Q ss_pred             -cchHHHHHHHhhcCceecc
Q psy10669        262 -LTGSKVELVLEEIAIACNK  280 (337)
Q Consensus       262 -~~~~~~~~~L~~~gI~v~~  280 (337)
                       -....+...|.+.||.+.+
T Consensus       392 ~~~a~~i~~~l~~~Gv~~~~  411 (451)
T PRK07678        392 NDKVASVVAACKEKGLIIGK  411 (451)
T ss_pred             hHHHHHHHHHHHHCCcEEee
Confidence             0134455666778999864

>PRK07481 hypothetical protein; Provisional

Probab=97.10  E-value=0.012  Score=59.12  Aligned_cols=146  Identities=16%  Similarity=0.206  Sum_probs=79.3

Q ss_pred             hHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeecc--CCch------hhh-hHHHHHhhc------c-
Q psy10669        140 YARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTK--TGEK------ILY-DYEEKINNA------V-  190 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~--~Gg~------i~~-~l~~~i~~~------~-  190 (337)
                      ++.++++|+++|++||+|+-++ .|=.+        +    +...+|  .||+      +.. ++.+.+...      + 
T Consensus       236 l~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~  315 (449)
T PRK07481        236 WPLVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGVKPDIMCLAKGITSGYVPLGATMVNARIADAFEANADFGGAIM  315 (449)
T ss_pred             HHHHHHHHHHcCCEEEEeehhhCcCcCchhhHhhhcCCCCCEEEEeecccCCCcCceEEEEcHHHHHHHhccCccccccc
Confidence            6679999999999999999986 33333        1    111222  2453      223 455555432      1 


Q ss_pred             CCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCEEecC-CCCCeEEEEEecCCC-----c
Q psy10669        191 FPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYHVVTG-GTDVHLILIDLRKNK-----L  262 (337)
Q Consensus       191 ~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~v~~~-~t~~h~v~V~~~~~~-----~  262 (337)
                      ..+++ +.|+...|+....+..+.+   +...+++.+..++|.+.|++.  .+.++.. -...-++-|.+....     .
T Consensus       316 h~~T~-~gnpl~~aaa~a~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Glm~gi~l~~~~~~~~~~  391 (449)
T PRK07481        316 HGYTY-SGHPVACAAALATLDIVVR---EDLPANAAKRGAYLLEGLQPLKERFELVGDVRGKGLMLALDLVADKATREPI  391 (449)
T ss_pred             cCCCC-CCCHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHHhhcCCCeEEEeecceEEEEEecccccccCCC
Confidence            11223 2355556665555655533   356777888888888888762  2333220 012234445553211     0


Q ss_pred             -----chHHHHHHHhhcCceeccCc-ccchhhh
Q psy10669        263 -----TGSKVELVLEEIAIACNKNT-GISLAAE  289 (337)
Q Consensus       263 -----~~~~~~~~L~~~gI~v~~~~-girig~~  289 (337)
                           ....+...|.+.|+.+.+.. .+||..+
T Consensus       392 ~~~~~~~~~~~~~~~~~Gvl~~~~g~~i~l~Pp  424 (449)
T PRK07481        392 DPSKGYANAVADVARENGVLVRPSGTKIILSPP  424 (449)
T ss_pred             CchhHHHHHHHHHHHhCCeEEEecCCEEEEECC
Confidence                 12345555667799987532 4666544

>TIGR03251 LAT_fam L-lysine 6-transaminase

Probab=97.06  E-value=0.0079  Score=60.15  Aligned_cols=148  Identities=16%  Similarity=0.148  Sum_probs=83.2

Q ss_pred             ccChHHHHHHhhhcCCeEEEecccc-ccccc--------ee----eeecc---CCchhhh-hHHHHHh-----hccCCCC
Q psy10669        137 CLDYARFRQICDETDSIMFADMSHI-SGLIA--------GV----KGVTK---TGEKILY-DYEEKIN-----NAVFPSL  194 (337)
Q Consensus       137 ~~d~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g~----~~T~~---~Gg~i~~-~l~~~i~-----~~~~p~~  194 (337)
                      +.-+++|+++|+++|++|++|+.|+ .|..+        ++    ...+|   -||++.. ++.+..+     ......+
T Consensus       238 ~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~a~~~~gv~PDi~~~gK~~~~~g~~~~~~i~~~~~~~~~~~~~~~~T  317 (431)
T TIGR03251       238 PEFLRAMRALCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVQPDIVAFGKKTQVCGIMAGRRVDEVADNVFAVPSRLNST  317 (431)
T ss_pred             HHHHHHHHHHHHHcCCEEEEecchhccCccchHHHHHhcCCCCCEEEecccCccceEEecchHHHhhhhcccCccccCCC
Confidence            3456679999999999999999998 44443        10    11112   3455544 2222111     1111122


Q ss_pred             CCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCE-EecC-CCCCeEEEEEecCCCcchHHHHHH
Q psy10669        195 QGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYH-VVTG-GTDVHLILIDLRKNKLTGSKVELV  270 (337)
Q Consensus       195 ~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~-v~~~-~t~~h~v~V~~~~~~~~~~~~~~~  270 (337)
                      + +.++...++..+++..+.+ +  ...+++.+..++|.+.|.+.  .+. ++.. -...-++.|.+.... ....+.+.
T Consensus       318 ~-~gnpl~~aaa~a~L~~l~~-~--~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~~~~~~-~~~~~~~~  392 (431)
T TIGR03251       318 W-GGNLVDMVRATRILEIIEE-E--RLVDNARVQGAHLLARLHELAAEFPHLVSNPRGRGLMCAFDLPSTA-DRDEVIRQ  392 (431)
T ss_pred             C-CCCHHHHHHHHHHHHHHHh-c--CHHHHHHHHHHHHHHHHHHHHHhCccceecccccceeEEEEeCCHH-HHHHHHHH
Confidence            3 2456666666666665533 2  35678888888888888762  222 2221 122345566664332 34456677


Q ss_pred             HhhcCceeccCc--ccchhhh
Q psy10669        271 LEEIAIACNKNT--GISLAAE  289 (337)
Q Consensus       271 L~~~gI~v~~~~--girig~~  289 (337)
                      |.+.||.+.+..  .+||.-+
T Consensus       393 l~~~Gvl~~~~g~~~lr~~P~  413 (431)
T TIGR03251       393 LYREGVLLLGCGERSIRFRPP  413 (431)
T ss_pred             HHhCCeEEecCCCCeEEEECC
Confidence            778899996532  5666433

Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.

>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase

Probab=97.04  E-value=0.0047  Score=61.38  Aligned_cols=145  Identities=13%  Similarity=0.175  Sum_probs=79.1

Q ss_pred             hHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeecc--CC-ch-----hhh-hHHHHHhhccCCCCCCC
Q psy10669        140 YARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTK--TG-EK-----ILY-DYEEKINNAVFPSLQGG  197 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~--~G-g~-----i~~-~l~~~i~~~~~p~~~g~  197 (337)
                      +++|+++|+++|++||+|+.|+ .|=.+        +    +....|  .| |+     +.. ++ +.+........+ +
T Consensus       217 l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~~v~PDi~~~~K~lg~~G~pigav~~~~~~-~~~~~~~~~~T~-~  294 (412)
T TIGR02407       217 LQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSFEPAGIEPDIVCLSKSISGYGLPLALTLIKPEL-DVWKPGEHNGTF-R  294 (412)
T ss_pred             HHHHHHHHHHcCCEEEEechhhCCCccchhHHhcccCCCCCEEEechhccCCccceeEEEEchhh-hccCCCccCCCC-C
Confidence            4568899999999999999987 22211        1    122223  12 32     222 33 222222222223 3


Q ss_pred             CcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh----CC-CEEecCCCCCeEEEEEecCCCcchHHHHHHHh
Q psy10669        198 PHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK----RG-YHVVTGGTDVHLILIDLRKNKLTGSKVELVLE  272 (337)
Q Consensus       198 ~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~----~G-~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~  272 (337)
                      .++...++..+++..+++.  .++.+++.+..++|.++|++    .+ + +.......-++.+.+.+.. ....+.+.|.
T Consensus       295 gnpl~~aaa~a~l~~~i~~--~~l~~~~~~~g~~l~~~l~~l~~~~~~~-~~~vrg~Gl~~~l~l~~~~-~~~~~~~~~~  370 (412)
T TIGR02407       295 GNNLAFVTATAALEYYWSD--DAFEKAVQRKSEIIQERLDRIVAEYPEL-IKQVRGRGLMQGIECGDGD-LAGKIAKAAF  370 (412)
T ss_pred             ccHHHHHHHHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHHHhhCCCc-eEeeecceeEEEEEecChH-HHHHHHHHHH
Confidence            4555555544555533331  35678888888888888775    22 2 1111123446667775432 3456667777


Q ss_pred             hcCceeccCc----ccchhhhh
Q psy10669        273 EIAIACNKNT----GISLAAEI  290 (337)
Q Consensus       273 ~~gI~v~~~~----girig~~~  290 (337)
                      +.||.+....    .|||..+.
T Consensus       371 ~~Gv~v~~~~~~~~~lr~~p~l  392 (412)
T TIGR02407       371 ENGLIIETSGPNDEVIKLLPPL  392 (412)
T ss_pred             HCCCEEeccCCCCCEEEEECCC
Confidence            7899996422    56776543

Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.

>PRK08360 4-aminobutyrate aminotransferase; Provisional

Probab=97.04  E-value=0.0088  Score=60.08  Aligned_cols=146  Identities=12%  Similarity=0.133  Sum_probs=81.4

Q ss_pred             hHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeeccC--C----chhhh--hHHHHHhhccCCCCCCCC
Q psy10669        140 YARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTKT--G----EKILY--DYEEKINNAVFPSLQGGP  198 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~~--G----g~i~~--~l~~~i~~~~~p~~~g~~  198 (337)
                      +++++++|+++|++||+|+.|. .|-.+        +    +....|.  +    |.+++  ++.+.+........+ +.
T Consensus       227 l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~a~~~~~~~pDiitlsK~l~~G~pigav~~~~~i~~~~~~~~~~~T~-~~  305 (443)
T PRK08360        227 FKKLKKILDEHGILLVVDEVQSGLGRTGKWFAIEHFGVEPDIITLGKPLGGGLPISATIGRAEIMDSLPPLAHAFTL-SG  305 (443)
T ss_pred             HHHHHHHHHHcCCEEEEeccccCCCcCccchhhhhcCCCCCEEEecccccCCceeEEEEEcHHHHhhhcCCCCCCCC-Cc
Confidence            6678899999999999999997 33222        1    1111221  2    33333  465555433222223 34


Q ss_pred             cHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCEEecC-CCCCeEEEEEecCCC-------cchHHHH
Q psy10669        199 HNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYHVVTG-GTDVHLILIDLRKNK-------LTGSKVE  268 (337)
Q Consensus       199 ~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~v~~~-~t~~h~v~V~~~~~~-------~~~~~~~  268 (337)
                      ++...++...++..+.+   .+..+++.++.++|.+.|++.  .+.++.. -...-++-|.+.+..       -....+.
T Consensus       306 ~p~~~aaa~a~l~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrg~Gl~~gie~~~~~~~~~~~~~~~~~~~  382 (443)
T PRK08360        306 NPVASAAALAVIEEIEE---KNLLKRAEKLGNYTKKRLEEMKKKHELIGDVRGIGLMIGVDLVKDRETKERAYEEAAKVV  382 (443)
T ss_pred             CHHHHHHHHHHHHHHHH---cCHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEecCCcccCccHHHHHHHH
Confidence            45555555566665543   246789999999999988763  3333321 012234444443211       0134566


Q ss_pred             HHHhhcCceeccCc--ccchhhh
Q psy10669        269 LVLEEIAIACNKNT--GISLAAE  289 (337)
Q Consensus       269 ~~L~~~gI~v~~~~--girig~~  289 (337)
                      ..|.+.||.+....  .+||.-+
T Consensus       383 ~~l~~~Gi~~~~~~~~~lr~~P~  405 (443)
T PRK08360        383 WRAWELGLIVTFFSGNVLRIQPP  405 (443)
T ss_pred             HHHHHCCeEEeecCCCEEEEeCC
Confidence            66777899987543  5666433

>PRK05839 hypothetical protein; Provisional

Probab=96.98  E-value=0.23  Score=48.43  Aligned_cols=144  Identities=14%  Similarity=0.096  Sum_probs=75.3

Q ss_pred             ccEEEEcCccc--ccccChHHHH---HHhhhcCCeEEEeccccc--------ccc-----------c--eeeeec-c---
Q psy10669        124 FDFLSSGTTCY--SRCLDYARFR---QICDETDSIMFADMSHIS--------GLI-----------A--GVKGVT-K---  173 (337)
Q Consensus       124 pklII~~~S~~--~~~~d~~~l~---eia~~~ga~l~vD~AH~~--------Gli-----------~--g~~~T~-~---  173 (337)
                      +|+|++..-.+  +...+.+++.   ++|+++|+++++|++..-        .+.           .  .+.+|. |   
T Consensus       156 ~k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~  235 (374)
T PRK05839        156 VDLVILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENTPPPSLLEASILVGNESFKNVLVINSISKRSS  235 (374)
T ss_pred             ccEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCCCCCCHhhhhcccCccccCcEEEEeccccccC
Confidence            67777652233  4666666655   567889999999998541        000           0  112222 2   


Q ss_pred             ----CCchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCC
Q psy10669        174 ----TGEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGG  247 (337)
Q Consensus       174 ----~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~  247 (337)
                          +-|+++.  ++.+.+.........+.+.+.. .++..++..  +...++.++++.++-+.+.+.|   |+. ..  
T Consensus       236 ~~GlRiG~ii~~~~~~~~~~~~~~~~~~~~~~~~q-~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~l---~~~-~p--  306 (374)
T PRK05839        236 APGLRSGFIAGDASILKKYKAYRTYLGCASPLPLQ-KAAAVAWLD--DEHAEFFRNIYAKNLKLAREIL---GIT-IP--  306 (374)
T ss_pred             CccceeEEEecCHHHHHHHHHHHhhcCCCCChHHH-HHHHHHhcc--chHHHHHHHHHHHHHHHHHHhc---CCC-CC--
Confidence                2366654  4666555432111122333322 333333321  2233566777777777666654   443 21  


Q ss_pred             CCCeEEEEEecCCCcchHHHHHHH-hhcCceecc
Q psy10669        248 TDVHLILIDLRKNKLTGSKVELVL-EEIAIACNK  280 (337)
Q Consensus       248 t~~h~v~V~~~~~~~~~~~~~~~L-~~~gI~v~~  280 (337)
                      ..+--+++++.+    ..++.+.| ++.||.+.+
T Consensus       307 ~gg~fi~~~~~~----~~~~~~~l~~~~gi~v~p  336 (374)
T PRK05839        307 PATFYVWLPVDN----DEEFTKKLYQNEGIKVLP  336 (374)
T ss_pred             CeeEEEEEeCCC----hHHHHHHHHHHCCEEEeC
Confidence            345556777642    34555566 458999886

>PRK06058 4-aminobutyrate aminotransferase; Provisional

Probab=96.97  E-value=0.0064  Score=60.99  Aligned_cols=145  Identities=14%  Similarity=0.130  Sum_probs=80.7

Q ss_pred             hHHHHHHhhhcCCeEEEeccccccc--cc--------e----eeeecc--CCc-----hhhh-hHHHHHhhccCCCCCCC
Q psy10669        140 YARFRQICDETDSIMFADMSHISGL--IA--------G----VKGVTK--TGE-----KILY-DYEEKINNAVFPSLQGG  197 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~~Gl--i~--------g----~~~T~~--~Gg-----~i~~-~l~~~i~~~~~p~~~g~  197 (337)
                      +++|+++|+++|++||+|+-|+ |+  .+        +    ++..+|  .||     ++.. ++.+.+.......++ +
T Consensus       242 l~~lr~lc~~~gillI~DEV~t-GfgRtG~~fa~~~~gv~PDiv~~gK~l~~G~Pi~av~~~~~i~~~~~~~~~~~T~-~  319 (443)
T PRK06058        242 LPALLEWCRENGVVFIADEVQT-GFARTGAWFACEHEGIVPDLITTAKGIAGGLPLSAVTGRAEIMDAPHPGGLGGTY-G  319 (443)
T ss_pred             HHHHHHHHHHcCCEEEEecccc-CCCcChhhhHHHhcCCCCCEEEEcccccCCCccEEEEEcHHHHhhccCCCCCCCC-C
Confidence            6678999999999999999987 43  22        1    111122  133     3333 455555433222333 4


Q ss_pred             CcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCEEecC-CCCCeEEEEEecCC--Cc-c---hHHHH
Q psy10669        198 PHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYHVVTG-GTDVHLILIDLRKN--KL-T---GSKVE  268 (337)
Q Consensus       198 ~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~v~~~-~t~~h~v~V~~~~~--~~-~---~~~~~  268 (337)
                      .|+...|+...++..+.+   .+..+++.+..++|.++|++.  .+.++.. -...-+..+.+.+.  .. +   ...+.
T Consensus       320 gnpl~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~  396 (443)
T PRK06058        320 GNPVACAAALAAIETIEE---DDLVARARQIEALMTDRLRALAAEDDRIGDVRGRGAMIAIELVKPGTTEPDAELTKALA  396 (443)
T ss_pred             CCHHHHHHHHHHHHHHHH---cCHHHHHHHHHHHHHHHHHHHHhhCCcEEeeeccceEEEEEEecCCCCCCcHHHHHHHH
Confidence            666777777777766543   256777888888888888772  2333210 12333444555321  10 1   22344


Q ss_pred             HHHhhcCceeccCc----ccchhhh
Q psy10669        269 LVLEEIAIACNKNT----GISLAAE  289 (337)
Q Consensus       269 ~~L~~~gI~v~~~~----girig~~  289 (337)
                      +.|.+.||.+.+..    -||+.-+
T Consensus       397 ~~~~~~Gv~~~~~~~~~~~lr~~Pp  421 (443)
T PRK06058        397 AAAHAAGVIVLTCGTYGNVIRLLPP  421 (443)
T ss_pred             HHHHHCCeEEeccCCCCCEEEEECC
Confidence            44456799987522    4666433

>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]

Probab=96.97  E-value=0.014  Score=58.39  Aligned_cols=143  Identities=17%  Similarity=0.135  Sum_probs=79.8

Q ss_pred             ccccChHHHHHHhhhcCCeEEEeccccccc--cc--------e----eeeec--------cCCchhhh-hHHHHHh----
Q psy10669        135 SRCLDYARFRQICDETDSIMFADMSHISGL--IA--------G----VKGVT--------KTGEKILY-DYEEKIN----  187 (337)
Q Consensus       135 ~~~~d~~~l~eia~~~ga~l~vD~AH~~Gl--i~--------g----~~~T~--------~~Gg~i~~-~l~~~i~----  187 (337)
                      +-++=++++++||++||++||+|+= ..|.  .|        |    +..+.        |-|+.+++ ++.+.+.    
T Consensus       233 pp~~Yl~~vr~iC~ky~ILlI~DEV-~tGFGRTG~~FA~e~~gi~PDi~~~aKGLT~GY~Pl~a~l~~~~I~~~~~~~~~  311 (449)
T COG0161         233 PPPGYLKRVREICDKYGILLIADEV-ATGFGRTGKMFACEHAGIVPDILCLAKGLTGGYLPLSAVLTSDRIYEAFSDGDA  311 (449)
T ss_pred             CChHHHHHHHHHHHHcCcEEEeecc-eeCCCcCchhhhhhhcCCCCCeeeecccccccchhhHhHhhhHHHHHHHhcccC
Confidence            3445577899999999999999985 2221  11        1    11111        33444444 3444333    


Q ss_pred             hccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh--CCCEEecC-CCCCeEEEEEecCCC--c
Q psy10669        188 NAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK--RGYHVVTG-GTDVHLILIDLRKNK--L  262 (337)
Q Consensus       188 ~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~--~G~~v~~~-~t~~h~v~V~~~~~~--~  262 (337)
                      .+.+.+.+=+.||-+-| .+.+-+++.+.  +...+++.+...+|.++|.+  .+...+++ -.-.-+.-|.+....  .
T Consensus       312 ~~f~HG~TYsghPlacA-aAla~L~i~e~--e~l~~~~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gli~~iElv~d~~t~  388 (449)
T COG0161         312 GAFMHGHTYSGNPLACA-AALANLDILEE--EDLLERVAEIGAYLQAGLQAALADHPLVGDVRGLGLIGAIELVADKATK  388 (449)
T ss_pred             CeeccCCccccCHHHHH-HHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHhcccCCcEEEeeccceEEEEEEecccccc
Confidence            23444443344444433 33444444432  36788889999999999997  33334431 122234444443322  1


Q ss_pred             ------chHHHHHHHhhcCceeccC
Q psy10669        263 ------TGSKVELVLEEIAIACNKN  281 (337)
Q Consensus       263 ------~~~~~~~~L~~~gI~v~~~  281 (337)
                            .+..+.+.+.+.|+.+++.
T Consensus       389 ~~f~~~~~~~~~~~~~e~Gl~iRp~  413 (449)
T COG0161         389 TPFEARVGARVRAAALERGLLIRPL  413 (449)
T ss_pred             cchhhhHHHHHHHHHHHCCeEEeec
Confidence                  1556777777789999975

>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type

Probab=96.96  E-value=0.12  Score=54.03  Aligned_cols=59  Identities=10%  Similarity=0.049  Sum_probs=39.1

Q ss_pred             HHHHHHHHHHH--hchhhHHHHHHHHHHHHHHHHHHHhCC-------CEE--ecCCCCCeEEEEEecCCCc
Q psy10669        203 IGAIATAMLQA--QSDEFKSYQAQVKANASHLSDEMIKRG-------YHV--VTGGTDVHLILIDLRKNKL  262 (337)
Q Consensus       203 iaala~a~~e~--~~~~~~~y~~~v~~na~~l~~~L~~~G-------~~v--~~~~t~~h~v~V~~~~~~~  262 (337)
                      .+++-.+++.+  -...|.++.++.++++++|++.|.+.+       |++  +. ..+..++...+...+.
T Consensus       437 AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~~~~~~~~~~el~~~~-~pdlniV~Fr~~~~g~  506 (608)
T TIGR03811       437 AASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNLEFKVGDKEIEVHPLT-KPDFNMVDYVFNEKGN  506 (608)
T ss_pred             HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCeeEEecC-CCCcceEEEEEecCCC
Confidence            44444555554  345788999999999999999998854       344  32 2455555555555553

This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.

>PLN02607 1-aminocyclopropane-1-carboxylate synthase

Probab=96.95  E-value=0.065  Score=53.92  Aligned_cols=153  Identities=6%  Similarity=0.018  Sum_probs=80.5

Q ss_pred             ccEEEE-cCcc-cccccChHH---HHHHhhhcCCeEEEeccccccccce-----------------------eeeec-c-
Q psy10669        124 FDFLSS-GTTC-YSRCLDYAR---FRQICDETDSIMFADMSHISGLIAG-----------------------VKGVT-K-  173 (337)
Q Consensus       124 pklII~-~~S~-~~~~~d~~~---l~eia~~~ga~l~vD~AH~~Gli~g-----------------------~~~T~-~-  173 (337)
                      +|+|++ .+++ .+...+-+.   |.++|+++|+.+++|++...-+...                       +..+. | 
T Consensus       201 vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~  280 (447)
T PLN02607        201 VRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKD  280 (447)
T ss_pred             eeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhc
Confidence            454444 4544 346666554   5577899999999999975422210                       01111 2 


Q ss_pred             ------CCchhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHH--HhchhhHHHHHHHHHHHHHHHHHHHhCCCE
Q psy10669        174 ------TGEKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQ--AQSDEFKSYQAQVKANASHLSDEMIKRGYH  242 (337)
Q Consensus       174 ------~Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e--~~~~~~~~y~~~v~~na~~l~~~L~~~G~~  242 (337)
                            +-|+++.   ++...+.....   ++.+.......++..+..  ......++.++++.++.+.+.+.|++.|+.
T Consensus       281 fg~~GlRvG~ivs~n~~l~~~~~~~~~---~~~~s~~~q~~~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~gi~  357 (447)
T PLN02607        281 LGLPGFRVGTIYSYNDKVVTTARRMSS---FTLVSSQTQHLLASMLSDEEFTENYIRTNRERLRKRYEMIVQGLRRAGIE  357 (447)
T ss_pred             CCCCcceEEEEEEcCHHHHHHHHHHhh---cCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence                  1155543   34444443211   111222222222222221  111112355677788888899999999987


Q ss_pred             EecCCCCCeEEEEEecCCC----cc-hHHHH-HHHhhcCceecc
Q psy10669        243 VVTGGTDVHLILIDLRKNK----LT-GSKVE-LVLEEIAIACNK  280 (337)
Q Consensus       243 v~~~~t~~h~v~V~~~~~~----~~-~~~~~-~~L~~~gI~v~~  280 (337)
                      ... ....-.++++++..-    .+ ..++. +.++++||.+.+
T Consensus       358 ~~~-~~ag~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~gV~v~p  400 (447)
T PLN02607        358 CLK-GNAGLFCWMNLSPLLETPTREGELALWDSILREVKLNISP  400 (447)
T ss_pred             ccc-CCeeEEEEEEchHhhcCCCchhHHHHHHHHHHhCCEEEcC
Confidence            654 233557788886421    01 12333 455668999876

>PRK08297 L-lysine aminotransferase; Provisional

Probab=96.88  E-value=0.019  Score=57.71  Aligned_cols=156  Identities=13%  Similarity=0.122  Sum_probs=89.7

Q ss_pred             ccEEEEcCccccc-------ccChHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeecc---CCchhhh
Q psy10669        124 FDFLSSGTTCYSR-------CLDYARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTK---TGEKILY  180 (337)
Q Consensus       124 pklII~~~S~~~~-------~~d~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~---~Gg~i~~  180 (337)
                      +..||+.+ ..+.       +..+++++++|+++|++||+|+-|+ .|-.+        +    +...+|   -||.+.+
T Consensus       226 iAavI~EP-i~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gK~l~~~a~l~~  304 (443)
T PRK08297        226 IACFIAEP-IQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVRPDIVAFGKKTQVCGIMAG  304 (443)
T ss_pred             EEEEEEcc-ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCccchHHHHHhcCCCCCEEEecccccccceecc
Confidence            46677753 3332       3556679999999999999999996 44443        1    111122   3566554


Q ss_pred             -hHHHHHhhcc--CCCCCCC--CcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CC-----EEecCCC
Q psy10669        181 -DYEEKINNAV--FPSLQGG--PHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GY-----HVVTGGT  248 (337)
Q Consensus       181 -~l~~~i~~~~--~p~~~g~--~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~-----~v~~~~t  248 (337)
                       ++.+......  .....+|  .|+...++...++..+.+   ++..+++.+..++|.+.|++.  .+     +|-+   
T Consensus       305 ~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~vrg---  378 (443)
T PRK08297        305 RRVDEVEDNVFAVSSRINSTWGGNLVDMVRARRILEVIEE---DGLVENAARQGEYLLARLEELAAEFPAVVSNVRG---  378 (443)
T ss_pred             hHHHHhhhhhccCccccCCCCCccHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHHCCCcceeeec---
Confidence             3322111110  0112223  355555555555555532   356788888999998888762  12     2322   


Q ss_pred             CCeEEEEEecCCCcchHHHHHHHhhcCceeccCc--ccchh
Q psy10669        249 DVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT--GISLA  287 (337)
Q Consensus       249 ~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~--girig  287 (337)
                      ...++.+.+.+.. ....+...|.+.||.+.+..  .+||.
T Consensus       379 ~G~~~~i~~~~~~-~~~~~~~~l~~~Gvl~~~~~~~~lr~~  418 (443)
T PRK08297        379 RGLMCAFDLPTTA-DRDEVIRRLWEEGVLVLPCGERSIRFR  418 (443)
T ss_pred             cceEEEEEecCHH-HHHHHHHHHHHCCEEEecCCCCeEEEE
Confidence            3567777775433 34456667778899986532  46664

>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=96.83  E-value=0.028  Score=56.79  Aligned_cols=143  Identities=15%  Similarity=0.157  Sum_probs=76.7

Q ss_pred             hHHHHHHhhhcCCeEEEeccccccc--cc--------e----eeeecc--CCchh------hh-hHHHHHhh------cc
Q psy10669        140 YARFRQICDETDSIMFADMSHISGL--IA--------G----VKGVTK--TGEKI------LY-DYEEKINN------AV  190 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~~Gl--i~--------g----~~~T~~--~Gg~i------~~-~l~~~i~~------~~  190 (337)
                      ++.++++|+++|++||+|+-|+ |+  .+        |    +...+|  .||++      .. ++.+.+..      ..
T Consensus       247 l~~lr~lc~~~g~llI~DEV~T-G~GRtG~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~  325 (460)
T PRK06916        247 LKGLRNLCTKYNVLFITDEVAT-GFGRTGKMFACEHENVTPDIMTAGKGLTGGYLPIAITVTTDEIYNAFYGDYEEQKTF  325 (460)
T ss_pred             HHHHHHHHHHcCCEEEeechhh-CCCcCchhhHHHhcCCCCCeeeeehhhhcCccccceeeecHHHHHHhhccccccCcc
Confidence            3468899999999999999984 43  22        1    111223  24542      22 45444331      11


Q ss_pred             C-CCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecC-CCCCeEEEEEecCCCc-----
Q psy10669        191 F-PSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTG-GTDVHLILIDLRKNKL-----  262 (337)
Q Consensus       191 ~-p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~-~t~~h~v~V~~~~~~~-----  262 (337)
                      + ..+++ .|+...|+..+.+..+.+   +.+.+++.++.++|.+.|++. .+.++.. -...-++-|.+.....     
T Consensus       326 ~~~~T~~-gnpl~~aaa~a~l~~l~~---~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Glm~giel~~~~~~~~~~  401 (460)
T PRK06916        326 FHGHSYT-GNPLGCAVALANLELYEK---TNLIEQVARKTEYVATQLEDLFALKHVGDIRQLGLMVGIELVKNKETKEPF  401 (460)
T ss_pred             ccCCCCC-CCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHhhcCCCeEEeecCCceeeEEeecccccccCC
Confidence            2 22343 366666665555655533   357788999999999998873 1221210 0011233333322110     


Q ss_pred             --c---hHHHHHHHhhcCceeccC-cccchh
Q psy10669        263 --T---GSKVELVLEEIAIACNKN-TGISLA  287 (337)
Q Consensus       263 --~---~~~~~~~L~~~gI~v~~~-~girig  287 (337)
                        +   +..+...|.+.||.+.+. ..+|+-
T Consensus       402 ~~~~~~~~~i~~~~~~~Gvl~~~~g~~l~~~  432 (460)
T PRK06916        402 EWTERVGVQVCKRSRELGMLTRPLGNTIVFM  432 (460)
T ss_pred             CchhhHHHHHHHHHHHCCeEEEecCCEEEEe
Confidence              0   234556666789998763 256654

>PRK07036 hypothetical protein; Provisional

Probab=96.80  E-value=0.023  Score=57.46  Aligned_cols=158  Identities=15%  Similarity=0.155  Sum_probs=85.5

Q ss_pred             cEEEEcCccc---ccccC----hHHHHHHhhhcCCeEEEecccc-ccccc---------e----eeeecc--CCch----
Q psy10669        125 DFLSSGTTCY---SRCLD----YARFRQICDETDSIMFADMSHI-SGLIA---------G----VKGVTK--TGEK----  177 (337)
Q Consensus       125 klII~~~S~~---~~~~d----~~~l~eia~~~ga~l~vD~AH~-~Gli~---------g----~~~T~~--~Gg~----  177 (337)
                      ..||+.+ ..   ++..+    ++.++++|+++|++||+|+-|+ .|=.+         |    ++..+|  .||+    
T Consensus       222 Aavi~EP-v~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv~PDivt~gK~l~gG~~Pi~  300 (466)
T PRK07036        222 AAFIAEP-ILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFFASEAVFGIQPDIITFAKGLTSGYQPLG  300 (466)
T ss_pred             EEEEEeC-CcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchhhhhhhhcCCCCCEEEEccccccCccccE
Confidence            4666653 33   33334    6789999999999999999984 44333         1    111122  2454    


Q ss_pred             --hhh-hHHHHHhhc------cCCC-CCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecC
Q psy10669        178 --ILY-DYEEKINNA------VFPS-LQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTG  246 (337)
Q Consensus       178 --i~~-~l~~~i~~~------~~p~-~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~  246 (337)
                        +.. ++.+.+...      .+.+ ++ +.|+...|+....+..+.+   .+..+++.+..++|.+.|++. .+.++..
T Consensus       301 av~~~~~i~~~~~~~~~~~~~~~~~~T~-~gnpl~~aaa~a~Le~i~~---~~l~~~~~~~g~~l~~~L~~l~~~~~v~~  376 (466)
T PRK07036        301 AVIISERLLDVISGPNAKGNVFTHGFTY-SGHPVACAAALKNIEIMER---EGLCEHVREVGPYFEERLASLRELPLVGD  376 (466)
T ss_pred             EEEEcHHHHHHHhcccCcCcccccCCCC-CCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHhccCCCEEE
Confidence              222 455544321      1112 33 3466666666666666543   257888888999999888762 2222210


Q ss_pred             -CCCCeEEEEEecCCC-------c---chHHHHHHHhhcCceeccCc-ccchh
Q psy10669        247 -GTDVHLILIDLRKNK-------L---TGSKVELVLEEIAIACNKNT-GISLA  287 (337)
Q Consensus       247 -~t~~h~v~V~~~~~~-------~---~~~~~~~~L~~~gI~v~~~~-girig  287 (337)
                       -...-++-|.+....       .   .+..+...|.+.||.+.+.. -+||.
T Consensus       377 vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~l~  429 (466)
T PRK07036        377 VRGDHLMACVECVADKGSKALLPEDIAIGQRIDRHCQERGLLVRPLEHLCVLS  429 (466)
T ss_pred             EEeeceEEEEEEccCccccCCCCchhHHHHHHHHHHHHCCcEEeecCCEEEEe
Confidence             011223444443211       0   12345556667799987532 34554

>PRK06917 hypothetical protein; Provisional

Probab=96.78  E-value=0.015  Score=58.54  Aligned_cols=138  Identities=14%  Similarity=0.180  Sum_probs=76.3

Q ss_pred             hHHHHHHhhhcCCeEEEeccccccc--cc--------e----eeeecc--CCchh------hh-hHHHHHhhc---cCCC
Q psy10669        140 YARFRQICDETDSIMFADMSHISGL--IA--------G----VKGVTK--TGEKI------LY-DYEEKINNA---VFPS  193 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~~Gl--i~--------g----~~~T~~--~Gg~i------~~-~l~~~i~~~---~~p~  193 (337)
                      ++.|+++|+++|++||+|+.|+ |+  .+        +    ++..+|  .||++      .. ++.+.+.+.   ++.+
T Consensus       223 l~~lr~lc~~~g~llI~DEv~t-GfGRtG~~~a~~~~gv~PDi~~~gK~l~~G~~Pi~a~~~~~~i~~~~~~~~~~~~~~  301 (447)
T PRK06917        223 YKVIKEICDHYDILFIADEVMT-GLGRTGAMFAMEHWGVEPDIMTLGKGLGAGYTPIAATVVSDRVMEPILRGSRSIMSG  301 (447)
T ss_pred             HHHHHHHHHHcCCEEEEechhh-CcCcccchhhHHhcCCCCCEEEeeehhccCCcceEEEEEcHHHHHHHhccCcccccc
Confidence            4568899999999999999996 53  11        1    111122  24542      22 455544431   2222


Q ss_pred             CCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCEEecC-CCCCeEEEEEecCCC-----c---
Q psy10669        194 LQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYHVVTG-GTDVHLILIDLRKNK-----L---  262 (337)
Q Consensus       194 ~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~v~~~-~t~~h~v~V~~~~~~-----~---  262 (337)
                      .+-+.|+...|+....+..+.+   ++..+++.++.++|.+.|++.  .+.++.. -...-+.-|.+....     .   
T Consensus       302 ~T~~gnpl~~aaa~a~l~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ie~~~~~~~~~~~~~~  378 (447)
T PRK06917        302 HTLSANPLSAATALAVLEYMEK---HNLPEKAAEKGEYLIKGLQKVQQQSTIIGDVRGKGLLIGVEFVADKKTKQPFSKS  378 (447)
T ss_pred             cCCCCCHHHHHHHHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeecceEEEEEEeccCCcCCCCcch
Confidence            1223566666666666666543   256788999999999988873  2332220 012223444442210     0   


Q ss_pred             --chHHHHHHHhhcCceeccC
Q psy10669        263 --TGSKVELVLEEIAIACNKN  281 (337)
Q Consensus       263 --~~~~~~~~L~~~gI~v~~~  281 (337)
                        ....+...|.+.||.+.+.
T Consensus       379 ~~~~~~~~~~~~~~Gvl~~~~  399 (447)
T PRK06917        379 QAVASELISVAAKNGLLLYPA  399 (447)
T ss_pred             hHHHHHHHHHHHhCCcEEEec
Confidence              1334555566789998653

>PRK07482 hypothetical protein; Provisional

Probab=96.76  E-value=0.02  Score=57.80  Aligned_cols=145  Identities=12%  Similarity=0.119  Sum_probs=78.5

Q ss_pred             hHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeecc--CCch------hhh-hHHHHHhh------ccC
Q psy10669        140 YARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTK--TGEK------ILY-DYEEKINN------AVF  191 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~--~Gg~------i~~-~l~~~i~~------~~~  191 (337)
                      ++.|+++|+++|++||+|+-++ .|=.+        |    +...+|  .||+      +.. ++.+.+..      .++
T Consensus       243 l~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~  322 (461)
T PRK07482        243 WPAIQAVLKKYDILLIADEVVTGFGRLGSMFGSDHYGIEPDLITVAKGLTSAYAPLSGSIVGEKVWDVLEQGSDEHGAIG  322 (461)
T ss_pred             HHHHHHHHHHhCCEEEEeccccCCCcCcchhhHHhcCCCCCEEEEccccccCccccceeeecHHHHHHHhcccccCCccc
Confidence            4468899999999999999976 33333        1    112222  2453      323 45444432      111


Q ss_pred             CCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCEEecC-CCCCeEEEEEecCCC-----cc
Q psy10669        192 PSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYHVVTG-GTDVHLILIDLRKNK-----LT  263 (337)
Q Consensus       192 p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~v~~~-~t~~h~v~V~~~~~~-----~~  263 (337)
                      .+.+-+.|+...|+..+.+..+.+   +...+++.+..++|.+.|.+.  .+.++.. -...-+.-|.+....     .+
T Consensus       323 h~~T~~gnpl~~Aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Glm~giel~~~~~~~~~~~  399 (461)
T PRK07482        323 HGWTYSGHPICAAAALANLDILER---ENLVGNAAEVGAYFRARLRAAFGDHPLVGEVRGVGMLAAVEFVADRDDRTPFD  399 (461)
T ss_pred             cCCCCCcCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeeceeEEEEEeccCCCcCCCCC
Confidence            111224566666666666666543   256777888888888888752  2322210 012234445443211     11


Q ss_pred             -----hHHHHHHHhhcCceeccC---cccchh
Q psy10669        264 -----GSKVELVLEEIAIACNKN---TGISLA  287 (337)
Q Consensus       264 -----~~~~~~~L~~~gI~v~~~---~girig  287 (337)
                           +..+...|.+.||.+...   ..+|+.
T Consensus       400 ~~~~~~~~i~~~~~~~Gvl~~~~~~~~~i~~~  431 (461)
T PRK07482        400 PALKIGPQVSAAALERGVIARAMPHGDILGFA  431 (461)
T ss_pred             hhhHHHHHHHHHHHHCCcEEecCCCCCEEEEe
Confidence                 234556666789998532   246654

>PRK09792 4-aminobutyrate transaminase; Provisional

Probab=96.76  E-value=0.021  Score=56.87  Aligned_cols=163  Identities=10%  Similarity=0.056  Sum_probs=87.1

Q ss_pred             ccEEEEcCccc--ccc-cC---hHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeecc-------CCch
Q psy10669        124 FDFLSSGTTCY--SRC-LD---YARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTK-------TGEK  177 (337)
Q Consensus       124 pklII~~~S~~--~~~-~d---~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~-------~Gg~  177 (337)
                      ...||+.+.-.  ++. .|   +++|+++|+++|++||+|+.|+ .|-.+        +    +.+.+|       -|++
T Consensus       199 iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pDi~t~gK~l~~G~pigav  278 (421)
T PRK09792        199 VAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYADKPDLMTMAKSLAGGMPLSGV  278 (421)
T ss_pred             eEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHhcCCCCcEEEeehhhcCCCceEEE
Confidence            35777775321  222 25   6678899999999999999987 32222        1    111122       2333


Q ss_pred             hhh-hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCEEecC-CCCCeEE
Q psy10669        178 ILY-DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYHVVTG-GTDVHLI  253 (337)
Q Consensus       178 i~~-~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~v~~~-~t~~h~v  253 (337)
                      +.. ++.+.+.......++ +.++...++..+.+..+.+   ....+++.+..++|.+.|.+.  .+..+.. -...-++
T Consensus       279 ~~~~~i~~~~~~~~~~~T~-~gnpl~~aaa~a~l~~l~~---~~~~~~~~~~g~~l~~~l~~l~~~~p~v~~vrG~Gl~~  354 (421)
T PRK09792        279 VGNANIMDAPAPGGLGGTY-AGNPLAVAAAHAVLNIIDK---ESLCERANQLGQRLKNTLIDAKESVPAIAAVRGLGSMI  354 (421)
T ss_pred             EEcHHHHhccCCCCcCCCC-CCCHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHHHHhCCCcceecccceEE
Confidence            222 455555433333334 3444555544455555532   256677778888888777651  2221211 1123456


Q ss_pred             EEEecCCC------cchHHHHHHHhhcCceeccC----cccchhhhh
Q psy10669        254 LIDLRKNK------LTGSKVELVLEEIAIACNKN----TGISLAAEI  290 (337)
Q Consensus       254 ~V~~~~~~------~~~~~~~~~L~~~gI~v~~~----~girig~~~  290 (337)
                      .|.+.+..      .....+...+.+.||.+...    ..|||.-+.
T Consensus       355 ~ie~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~g~~~~~irl~P~l  401 (421)
T PRK09792        355 AAEFNDPQTGEPSAAIAQKIQQRALAQGLLLLTCGAYGNVIRFLYPL  401 (421)
T ss_pred             EEEecCCccCCcchHHHHHHHHHHHHCCcEEeecCCCCCEEEEeCCC
Confidence            66664321      12344555666779998532    267776443

>PRK07495 4-aminobutyrate aminotransferase; Provisional

Probab=96.74  E-value=0.017  Score=57.72  Aligned_cols=145  Identities=13%  Similarity=0.175  Sum_probs=79.7

Q ss_pred             hHHHHHHhhhcCCeEEEeccccccccc-e---------e----eeecc--CCch----hhh--hHHHHHhhccCCCCCCC
Q psy10669        140 YARFRQICDETDSIMFADMSHISGLIA-G---------V----KGVTK--TGEK----ILY--DYEEKINNAVFPSLQGG  197 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~~Gli~-g---------~----~~T~~--~Gg~----i~~--~l~~~i~~~~~p~~~g~  197 (337)
                      +++|+++|+++|+++|+|+.|+ |+-- |         +    .+..|  .||+    +++  ++.+.+.......++ +
T Consensus       221 l~~l~~l~~~~g~llI~DEv~t-G~gr~G~~~a~~~~gv~pDi~tlsK~l~~G~pigav~~~~~i~~~~~~~~~~~T~-~  298 (425)
T PRK07495        221 MKALRELCDQHGILLIADEVQT-GFARTGKLFAMEHHEVAADLTTMAKGLAGGFPLAAVTGRAEIMDAPGPGGLGGTY-G  298 (425)
T ss_pred             HHHHHHHHHHcCCEEEEechhh-cCCcCCCceeecccCCCCCEEeehhhhcCCccceEEEEcHHHHhccCCCCcCCCC-C
Confidence            4568899999999999999996 5411 1         0    11112  1343    222  455555443333334 3


Q ss_pred             CcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCEEecC-CCCCeEEEEEecCCCc---c---hHHHH
Q psy10669        198 PHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYHVVTG-GTDVHLILIDLRKNKL---T---GSKVE  268 (337)
Q Consensus       198 ~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~v~~~-~t~~h~v~V~~~~~~~---~---~~~~~  268 (337)
                      .++...++..+++..+.+   ..+.+++.+..++|+++|++.  .+..+.. -...-++.|.+.+...   +   ...+.
T Consensus       299 ~~pl~~aaa~a~l~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~iel~~~~~~~~~~~~~~~~~  375 (425)
T PRK07495        299 GNPLGIAAAHAVLDVIEE---EDLCERANQLGNRLKQRLASLRETVPEIADIRGPGFMNAVEFNDADSGLPSAEFANRVR  375 (425)
T ss_pred             CCHHHHHHHHHHHHHHHh---chHHHHHHHHHHHHHHHHHHHHhhCCCeeeeecCceEEEEEEecCCCCCccHHHHHHHH
Confidence            555666665566666533   357778888888888888762  2222210 0123455566643210   1   23445


Q ss_pred             HHHhhcCceeccC----cccchhhh
Q psy10669        269 LVLEEIAIACNKN----TGISLAAE  289 (337)
Q Consensus       269 ~~L~~~gI~v~~~----~girig~~  289 (337)
                      +.+.+.|+.+...    ..|||.-|
T Consensus       376 ~~~~~~Gvl~~~~g~~~~~~r~~Pp  400 (425)
T PRK07495        376 LKALEKGLILLTCGVHGNVIRFLAP  400 (425)
T ss_pred             HHHHHCCeEEeecCCCCCEEEEeCC
Confidence            5556679998642    14666533

>PRK06777 4-aminobutyrate aminotransferase; Provisional

Probab=96.73  E-value=0.024  Score=56.45  Aligned_cols=145  Identities=12%  Similarity=0.125  Sum_probs=81.3

Q ss_pred             hHHHHHHhhhcCCeEEEeccccccccc-e-------------eeeecc--CCch----hhh--hHHHHHhhccCCCCCCC
Q psy10669        140 YARFRQICDETDSIMFADMSHISGLIA-G-------------VKGVTK--TGEK----ILY--DYEEKINNAVFPSLQGG  197 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~~Gli~-g-------------~~~T~~--~Gg~----i~~--~l~~~i~~~~~p~~~g~  197 (337)
                      +++|+++|+++|++||+|+.|+ |+-- |             +.+..|  .||+    +++  ++.+.+.+.....++ +
T Consensus       221 l~~l~~lc~~~g~llI~DEv~t-g~gr~g~~~~~~~~~~~pDiv~~sK~l~~G~pigav~~~~~i~~~~~~~~~~~T~-~  298 (421)
T PRK06777        221 MSALRTLCDEHGILLIADEVQT-GFARTGKLFAMEYYDVKPDLITMAKSLGGGMPISAVVGRAEVMDAPAPGGLGGTY-A  298 (421)
T ss_pred             HHHHHHHHHHcCCEEEEechhh-CCccCCchhhhhhcCCCCCEEeeehhhcCCCceEEEEEcHHHHhccCCCCCCCCC-C
Confidence            6678899999999999999997 5411 1             111112  1332    222  455555543332334 3


Q ss_pred             CcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC--CEEec-CCCCCeEEEEEecCC--Ccch----HHHH
Q psy10669        198 PHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG--YHVVT-GGTDVHLILIDLRKN--KLTG----SKVE  268 (337)
Q Consensus       198 ~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G--~~v~~-~~t~~h~v~V~~~~~--~~~~----~~~~  268 (337)
                      .++...++...++..+.+   ++..+++.++.++|.+.|++..  +.++. -....-+..+.+...  +.+.    ..+.
T Consensus       299 ~~p~~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~  375 (421)
T PRK06777        299 GNPLAVAAALAVLDVIAE---EKLCQRALILGAHLVEVLEKAKASCPAIVDIRARGSMVAVEFNDPQTGKPSPEFTRQYQ  375 (421)
T ss_pred             cCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCceEEEEEEEecCccCCccHHHHHHHH
Confidence            577777777777766533   4678888899999999988731  11111 001222334434321  1111    2233


Q ss_pred             HHHhhcCceeccCc----ccchhhh
Q psy10669        269 LVLEEIAIACNKNT----GISLAAE  289 (337)
Q Consensus       269 ~~L~~~gI~v~~~~----girig~~  289 (337)
                      +.|.+.||.+.+..    -+||.-+
T Consensus       376 ~~~~~~Gv~i~~~~~~g~~lr~~pp  400 (421)
T PRK06777        376 RQALEEGLLLLSCGVHGNVIRFLYP  400 (421)
T ss_pred             HHHHhCCeEEeecCCCCCEEEEeCC
Confidence            33456799987642    4777644

>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

Probab=96.71  E-value=0.13  Score=50.17  Aligned_cols=161  Identities=14%  Similarity=0.154  Sum_probs=99.5

Q ss_pred             cEEEEc-Ccccc--cccChH---HHHHHhhhcCCeEEEeccccccccce-------------------eeeec-c-----
Q psy10669        125 DFLSSG-TTCYS--RCLDYA---RFRQICDETDSIMFADMSHISGLIAG-------------------VKGVT-K-----  173 (337)
Q Consensus       125 klII~~-~S~~~--~~~d~~---~l~eia~~~ga~l~vD~AH~~Gli~g-------------------~~~T~-~-----  173 (337)
                      .+|+.- ..-+|  .|.+.+   +|.++.++.|.+-++|.| .-|+=.|                   +++.. |     
T Consensus       173 ~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~A-YQGF~~GleeDa~~lR~~a~~~~~~lva~S~SKnfgLY  251 (396)
T COG1448         173 SVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIA-YQGFADGLEEDAYALRLFAEVGPELLVASSFSKNFGLY  251 (396)
T ss_pred             CEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehh-hhhhccchHHHHHHHHHHHHhCCcEEEEehhhhhhhhh
Confidence            566653 22244  333333   567777889999999999 2232221                   23333 2     


Q ss_pred             ---CCchhhh----h----HHHHHhhccCCCCCCCCcHHHHHHHHHHH-----HHHhchhhHHHHHHHHHHHHHHHHHHH
Q psy10669        174 ---TGEKILY----D----YEEKINNAVFPSLQGGPHNHAIGAIATAM-----LQAQSDEFKSYQAQVKANASHLSDEMI  237 (337)
Q Consensus       174 ---~Gg~i~~----~----l~~~i~~~~~p~~~g~~~~~~iaala~a~-----~e~~~~~~~~y~~~v~~na~~l~~~L~  237 (337)
                         .|++++.    +    +...+...++ .++|+|..|+.+-.+.-+     +...+.+-.++++++.+.-+.|.+.|+
T Consensus       252 gERVGa~~vva~~~~~a~~v~sqlk~~iR-~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~mR~~lv~~L~  330 (396)
T COG1448         252 GERVGALSVVAEDAEEADRVLSQLKAIIR-TNYSNPPAHGAAVVATILNNPELRAEWEQELEEMRQRILEMRQALVDALK  330 (396)
T ss_pred             hhccceeEEEeCCHHHHHHHHHHHHHHHH-hccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence               3777652    2    2234444444 456778777765444332     222244567899999999999999999


Q ss_pred             hC----CCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCcccchhhhhHhhhC
Q psy10669        238 KR----GYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNTGISLAAEIQAISG  295 (337)
Q Consensus       238 ~~----G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~girig~~~~t~~G  295 (337)
                      +.    .|+.+.    .+...  ++-.|++..++.++.++.||++-++.  ||++.-++..+
T Consensus       331 ~~~~~~~f~~i~----~Q~GM--Fsy~Gls~~QV~rLree~~IY~v~sG--Ri~vaGl~~~n  384 (396)
T COG1448         331 ALGAPRNFDFII----SQRGM--FSYTGLSPEQVDRLREEFGIYLVASG--RINVAGLNTSN  384 (396)
T ss_pred             hhCCCcccchHh----hcCce--eecCCCCHHHHHHHHHhccEEEecCC--eeeeccCChhh
Confidence            93    455443    22233  23348899999999999999988754  77766666443

>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional

Probab=96.64  E-value=0.023  Score=57.40  Aligned_cols=94  Identities=13%  Similarity=0.125  Sum_probs=53.2

Q ss_pred             hHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeecc-------CCchhhh-hHHHHHhhccCCCCCCCC
Q psy10669        140 YARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTK-------TGEKILY-DYEEKINNAVFPSLQGGP  198 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~-------~Gg~i~~-~l~~~i~~~~~p~~~g~~  198 (337)
                      +++++++|+++|++||+|+=++ .|=.+        |    ++..+|       -|+++.. ++ +.+++.....+++ .
T Consensus       254 l~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~e~~gv~PDiv~~gKglggG~PlsAv~~~~~~-~~~~~~~~~~T~~-g  331 (464)
T PRK06938        254 LRGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGIIPDVVVLSKAIGGSLPLAVVVYREWL-DTWQPGAHAGTFR-G  331 (464)
T ss_pred             HHHHHHHHHHcCCEEEEeccccCCCcCcHHHHHHhcCCCCCEEEeeccccCCCceEEEeehhHh-hccCCCCCCCCCC-c
Confidence            4468899999999999999976 33233        1    111222       2333322 22 2222222223333 4


Q ss_pred             cHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh
Q psy10669        199 HNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK  238 (337)
Q Consensus       199 ~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~  238 (337)
                      |+...|+..+.+..+.+   .+..+++.+..++|.+.|.+
T Consensus       332 npla~Aaa~a~L~~l~~---~~l~~~~~~~G~~l~~~L~~  368 (464)
T PRK06938        332 NQMAMAAGSATLRYIKE---HRLAEHAAAMGERLREHLRQ  368 (464)
T ss_pred             CHHHHHHHHHHHHHHHH---hHHHHHHHHHHHHHHHHHHH
Confidence            55555555555655533   35667788888888888876

>PRK07483 hypothetical protein; Provisional

Probab=96.63  E-value=0.012  Score=59.11  Aligned_cols=137  Identities=14%  Similarity=0.177  Sum_probs=74.4

Q ss_pred             hHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeecc--CCch------hhh-hHHHHHhhc--cC-C-C
Q psy10669        140 YARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTK--TGEK------ILY-DYEEKINNA--VF-P-S  193 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~--~Gg~------i~~-~l~~~i~~~--~~-p-~  193 (337)
                      ++.++++|+++|++||+|+-|+ .|-.+        +    +...+|  .||+      +.. ++.+.+...  .+ . .
T Consensus       223 l~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~h~~  302 (443)
T PRK07483        223 FKRIREVCDRYGVLLILDEVMCGMGRTGTLFACEEDGVAPDLVTIAKGLGAGYQPIGAVLASDRIYDAIADGSGFFQHGH  302 (443)
T ss_pred             HHHHHHHHHHhCCEEEEecceeCcccCcHHHHHhhcCCCCCeeeehhhhccCccccEEEEEcHHHHHHHhcCCCccccCC
Confidence            5678999999999999999987 33333        1    111222  2454      222 455555432  11 1 2


Q ss_pred             CCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh--CCCEEecC-CCCCeEEEEEecCCC-----c---
Q psy10669        194 LQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK--RGYHVVTG-GTDVHLILIDLRKNK-----L---  262 (337)
Q Consensus       194 ~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~--~G~~v~~~-~t~~h~v~V~~~~~~-----~---  262 (337)
                      ++ +.|+...|+..+.+..+.+   ....+++.+..++|.+.|++  ..+.++.. -...-+.-|.+....     .   
T Consensus       303 T~-~gnpl~~aaa~a~l~~i~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vRG~Glm~gie~~~~~~~~~~~~~~  378 (443)
T PRK07483        303 TY-LGHATACAAALAVQRVIAE---DGLLANVRARGEQLRARLRERLGQHPHVGDIRGRGLFVGVELVADRATKAPFDPA  378 (443)
T ss_pred             CC-CCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHhcCCCeeeEeecccEEEEEEeecccccCCCCch
Confidence            22 3455566555555555533   35678888888999888875  23332210 011223334442110     0   


Q ss_pred             --chHHHHHHHhhcCceecc
Q psy10669        263 --TGSKVELVLEEIAIACNK  280 (337)
Q Consensus       263 --~~~~~~~~L~~~gI~v~~  280 (337)
                        ....+.+.+.+.|+.+.+
T Consensus       379 ~~~~~~~~~~~~~~Gll~~~  398 (443)
T PRK07483        379 LKLHARIKREAMARGLMVYP  398 (443)
T ss_pred             hhHHHHHHHHHHHCCcEEEe
Confidence              123455566677999864

>TIGR00461 gcvP glycine dehydrogenase (decarboxylating)

Probab=96.57  E-value=0.036  Score=60.22  Aligned_cols=159  Identities=12%  Similarity=0.129  Sum_probs=94.5

Q ss_pred             cCcccccccChHHHHHHhhhcCCeEEEeccccccccc------e---eeee-----------ccCCchhhh--hHHHHH-
Q psy10669        130 GTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA------G---VKGV-----------TKTGEKILY--DYEEKI-  186 (337)
Q Consensus       130 ~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~------g---~~~T-----------~~~Gg~i~~--~l~~~i-  186 (337)
                      .+..++...|+++|.+++|+.|++++|++-..++.+-      |   +.+.           +|..|++.+  ++..++ 
T Consensus       202 ~Pn~~G~ied~~~i~~~~h~~gal~~~~ad~~al~ll~~Pge~GaDi~vg~~q~fg~p~g~GGP~aG~~a~~~~l~r~lP  281 (939)
T TIGR00461       202 YPATDGSILDYKQLIDALHSHKSLVSVAADLMALTLLTPPGHYGADIVLGSSQRFGVPMGYGGPHAAFFAVKDEYNRKMP  281 (939)
T ss_pred             CCCCCeEEecHHHHHHHHHHcCCEEEEEechHHhCCcCCHHHcCCcEEeeCCCccCCCCCCCCCceeeeeecHhhHhhCC
Confidence            3556677779999999999999999998777664443      1   1221           233455543  222210 


Q ss_pred             --------hh---------------ccCCCCCCCCcHH---HHHHHHHH--HHHHhchhhHHHHHHHHHHHHHHHHHHHh
Q psy10669        187 --------NN---------------AVFPSLQGGPHNH---AIGAIATA--MLQAQSDEFKSYQAQVKANASHLSDEMIK  238 (337)
Q Consensus       187 --------~~---------------~~~p~~~g~~~~~---~iaala~a--~~e~~~~~~~~y~~~v~~na~~l~~~L~~  238 (337)
                              +.               .++-. -+|+|.-   .+.++.++  +..+-....++.++++..++.+|++.|.+
T Consensus       282 grivG~s~D~~G~~~~~l~LqtReqhIrRe-kAtSNICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~  360 (939)
T TIGR00461       282 GRIVGVSKDALGNTALRLALQTREQHIRRD-KATSNICTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLEN  360 (939)
T ss_pred             CCceeEEecCCCCccceeeccccccccccc-ccCcchhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence                    00               01000 1333322   22222223  22332233578899999999999999999


Q ss_pred             CCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCc--ccchhhhhHh
Q psy10669        239 RGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT--GISLAAEIQA  292 (337)
Q Consensus       239 ~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~--girig~~~~t  292 (337)
                      .|+++... .--..+.|.+..  .+..++.+.|.+.||.++...  .+++...+.+
T Consensus       361 ~G~~~~~~-~fF~~~~v~~~~--~~~~~i~~~~~~~gi~l~~~~~~~i~~s~~E~~  413 (939)
T TIGR00461       361 DPHELINK-TWFDTLTVKVGN--GISSELLKAAEEFNINLRAVDTTTVGIALDETT  413 (939)
T ss_pred             CCCcccCC-CccceEEEEeCC--CCHHHHHHHHHHCCCeeeecCCCEEEEEeecCC
Confidence            99999863 222345555532  256778888888899987643  4677554443

This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.

>PRK05965 hypothetical protein; Provisional

Probab=96.55  E-value=0.031  Score=56.43  Aligned_cols=147  Identities=13%  Similarity=0.080  Sum_probs=77.9

Q ss_pred             hHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeecc--CCch------hhh-hHHHHHhhc------cC
Q psy10669        140 YARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTK--TGEK------ILY-DYEEKINNA------VF  191 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~--~Gg~------i~~-~l~~~i~~~------~~  191 (337)
                      ++.++++|+++|++||+|+-++ .|=.+        |    +...+|  .||+      +.. ++.+.+...      .+
T Consensus       238 l~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~  317 (459)
T PRK05965        238 LKAMREACRELGILFVADEVITGFGRTGPLFACEAEGVVPDLMTVAKGLTSGYVPMGAVLMSDHVYQGIADGAGAAAPVG  317 (459)
T ss_pred             HHHHHHHHHHcCCEEEEechhccCccCchhhhHhhcCCCCCeEEechhhccCCcceeEEEEcHHHHHHHhcccccccccc
Confidence            3468899999999999999976 33333        1    111122  2454      333 455544321      11


Q ss_pred             CCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecC-CCCCeEEEEEecCCC-----c--
Q psy10669        192 PSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTG-GTDVHLILIDLRKNK-----L--  262 (337)
Q Consensus       192 p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~-~t~~h~v~V~~~~~~-----~--  262 (337)
                      .+.+-+.|+...|+....+..+.+   +...+++.+..++|.+.|++. .+.++.. -...-++-|.+....     .  
T Consensus       318 h~~T~~gnpl~~Aaa~a~L~~l~~---~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~  394 (459)
T PRK05965        318 HGYTYSAHPVSAAVGLEVLRLYHE---GGLLANGQKAGPRFAAGLDALRAHPLVGDVRGRGLLGALELVADKATKTPFDA  394 (459)
T ss_pred             ccCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHhhccCCCEEEEeecceEEEEEEeccccccCCCCc
Confidence            222223556666665555655533   356778888888888888773 1222210 012223344442211     0  


Q ss_pred             ---chHHHHHHHhhcCceeccCc--ccchhhh
Q psy10669        263 ---TGSKVELVLEEIAIACNKNT--GISLAAE  289 (337)
Q Consensus       263 ---~~~~~~~~L~~~gI~v~~~~--girig~~  289 (337)
                         -...+...+.+.|+.+.+..  -||+.-+
T Consensus       395 ~~~~~~~i~~~~~~~Gll~~~~g~~~i~~~Pp  426 (459)
T PRK05965        395 ALDPADRIFDRAYANGLVFRAFGDGVLGFAPA  426 (459)
T ss_pred             hhHHHHHHHHHHHhCCeEEEecCCcEEEEECC
Confidence               12345555667799987532  3665433

>PRK07480 putative aminotransferase; Validated

Probab=96.50  E-value=0.017  Score=58.24  Aligned_cols=146  Identities=14%  Similarity=0.099  Sum_probs=79.3

Q ss_pred             hHHHHHHhhhcCCeEEEecccc-ccccc--------ee----eeecc--CCch------hhh-hHHHHHh--hc--cCCC
Q psy10669        140 YARFRQICDETDSIMFADMSHI-SGLIA--------GV----KGVTK--TGEK------ILY-DYEEKIN--NA--VFPS  193 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g~----~~T~~--~Gg~------i~~-~l~~~i~--~~--~~p~  193 (337)
                      ++.|++||+++|++||+|+-|+ .|=.+        |+    ...+|  .||+      +.. ++.+.+.  ..  ...+
T Consensus       242 l~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~  321 (456)
T PRK07480        242 WPEIQRICRKYDILLVADEVICGFGRTGEWFGSQHFGIKPDLMTIAKGLTSGYIPMGAVGVGDRVAEVLIEEGGEFNHGF  321 (456)
T ss_pred             HHHHHHHHHHcCCEEEEechhhCCCcCcchhhhhhcCCCCCeeeeehhhccCCccceEEEEcHHHHHHHhcCCCCcccCC
Confidence            6679999999999999999995 43333        11    11122  2443      333 4555442  22  1223


Q ss_pred             CCCCCcHHHHHHHHHHHHHHhchhhHHHHHHH-HHHHHHHHHHHHhC-CCEEecC-CCCCeEEEEEecCCC-----c---
Q psy10669        194 LQGGPHNHAIGAIATAMLQAQSDEFKSYQAQV-KANASHLSDEMIKR-GYHVVTG-GTDVHLILIDLRKNK-----L---  262 (337)
Q Consensus       194 ~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v-~~na~~l~~~L~~~-G~~v~~~-~t~~h~v~V~~~~~~-----~---  262 (337)
                      ++ +.|+...|+...++..+.+   +...+++ .+..++|.+.|++. .+.++.. -...-+.-|.+....     .   
T Consensus       322 T~-~gnpl~~Aaa~a~L~~l~~---~~l~~~~~~~~g~~l~~~l~~l~~~~~i~~vrG~Glm~gie~~~~~~~~~~~~~~  397 (456)
T PRK07480        322 TY-SGHPVAAAVALANLRILRD---EGIVERVRDDTGPYLQKRLRELADHPLVGEVRGVGLVGAIELVKDKATRERFEAG  397 (456)
T ss_pred             CC-CcCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHhhcCCCeeeEEeecceEEEEEeccccccccCcch
Confidence            34 4557777777777766643   2466777 47888888888762 1221110 011123333342211     0   


Q ss_pred             --chHHHHHHHhhcCceeccCc-ccchhhh
Q psy10669        263 --TGSKVELVLEEIAIACNKNT-GISLAAE  289 (337)
Q Consensus       263 --~~~~~~~~L~~~gI~v~~~~-girig~~  289 (337)
                        ....+...+.+.||.+.... .+||.-+
T Consensus       398 ~~~~~~~~~~~~~~Gll~~~~~~~l~~~Pp  427 (456)
T PRK07480        398 GGVGTICRDHCFANGLIMRAVGDRMIISPP  427 (456)
T ss_pred             hhHHHHHHHHHHHCCcEEeecCCEEEEECC
Confidence              12345555667799997532 5666533

>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases

Probab=96.41  E-value=0.032  Score=55.99  Aligned_cols=146  Identities=8%  Similarity=0.037  Sum_probs=77.0

Q ss_pred             ChHHHHHHhhhcCCeEEEecccc-ccccc--------ee----eeecc-------CCchhhh-hHHHHHhhccCCCCCCC
Q psy10669        139 DYARFRQICDETDSIMFADMSHI-SGLIA--------GV----KGVTK-------TGEKILY-DYEEKINNAVFPSLQGG  197 (337)
Q Consensus       139 d~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g~----~~T~~-------~Gg~i~~-~l~~~i~~~~~p~~~g~  197 (337)
                      =++.++++|+++|++||+|+-++ .|=.+        ++    ...+|       -|+++.. ++ +.........++ +
T Consensus       228 yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gK~l~~G~Pigav~~~~~~-~~~~~~~~~~T~-~  305 (442)
T TIGR00709       228 WLQKIREVTRKHDIKLILDEVQAGFGRSGTMFAFEHAGIEPDFVVMSKAVGGGLPLAVLLIAPEF-DAWQPAGHTGTF-R  305 (442)
T ss_pred             HHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHHcCCCCcEEEEcccccCCcccEEEEEchHH-hccCCCcCCCCC-C
Confidence            34568899999999999999986 33333        11    11122       2233322 32 222222222223 4


Q ss_pred             CcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCEEecC-CCCCeEEEEEecCCC--------c----
Q psy10669        198 PHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYHVVTG-GTDVHLILIDLRKNK--------L----  262 (337)
Q Consensus       198 ~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~v~~~-~t~~h~v~V~~~~~~--------~----  262 (337)
                      .|+...++..+++..+.+   +...+++.++.++|.+.|++.  .+.++.. -...-++-|.+.+..        .    
T Consensus       306 gnpla~aaa~a~L~~i~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~  382 (442)
T TIGR00709       306 GNQLAMVTGTEALNYWKD---DNLAQNAQERGERITSFLDDMIKEHPCIGNVRGRGLMQGIMIVDERQSKDATGAYPRDC  382 (442)
T ss_pred             cCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEccCcccccccccCCcch
Confidence            566666666666665543   245678888888888888762  3332220 012223444443211        0    


Q ss_pred             -chHHHHHHHhhcCceeccCc----ccchhhh
Q psy10669        263 -TGSKVELVLEEIAIACNKNT----GISLAAE  289 (337)
Q Consensus       263 -~~~~~~~~L~~~gI~v~~~~----girig~~  289 (337)
                       ....+...+.+.|+.+.+..    .||+.-+
T Consensus       383 ~~~~~~~~~~~~~Gvl~~~~~~~~~~l~~~Pp  414 (442)
T TIGR00709       383 ELAAAIQGACFENGLLLETGGREGEVFRLLCP  414 (442)
T ss_pred             HHHHHHHHHHHHCCeEEeecCCCCCEEEEECC
Confidence             12345555667799986431    4566444

This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.

>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=96.39  E-value=0.057  Score=54.41  Aligned_cols=144  Identities=13%  Similarity=0.074  Sum_probs=77.5

Q ss_pred             hHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeecc--CCch------hhh-hHHHHHhhc-----c-C
Q psy10669        140 YARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTK--TGEK------ILY-DYEEKINNA-----V-F  191 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~--~Gg~------i~~-~l~~~i~~~-----~-~  191 (337)
                      ++.++++|+++|++||+|+-++ .|=.+        |    +...+|  .||+      +.. ++.+.+...     . .
T Consensus       245 l~~lr~lc~~~gillI~DEV~TG~GRtG~~fa~~~~gv~PDivt~gKgl~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~  324 (453)
T PRK06943        245 LRGLRALCDRYGVHLIADEIAVGCGRTGTFFACEQAGVWPDFLCLSKGISGGYLPLSLVLSRDAIFAAFYDDDVTRGFLH  324 (453)
T ss_pred             HHHHHHHHHHcCCEEEeechhhCCCCCcchhHHHhCCCCCCeEeeehhhccCcccceEEEEcHHHHHhhcccCccCCccC
Confidence            4468899999999999999975 44333        1    111222  2454      222 455544321     1 1


Q ss_pred             CCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecC-CCCCeEEEEEecCCC-c---chH
Q psy10669        192 PSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTG-GTDVHLILIDLRKNK-L---TGS  265 (337)
Q Consensus       192 p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~-~t~~h~v~V~~~~~~-~---~~~  265 (337)
                      ..++ +.|+...|+..+.+..+.+   +...+++.+..++|.+.|++. .+..+.. -...-+.-|.+.... .   ...
T Consensus       325 ~~T~-~gnpl~~aaa~a~L~~i~~---~~l~~~~~~~G~~l~~~L~~l~~~~~v~~vrG~Gl~~gvel~~~~~~~~~~~~  400 (453)
T PRK06943        325 SHSY-TGNPLACRAALATLDLFAE---DDVLARNARKSARLRAALAPLAAHPQVRHLRQRGTIFAFDVALDGDAARTFSR  400 (453)
T ss_pred             CCCC-CCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHhcCCCEEeEeccccEEEEEEccCCCcchHHHH
Confidence            1223 2355666665555655543   246778888888888888773 1211110 011223445554211 0   123


Q ss_pred             HHHHHHhhcCceeccC-cccchh
Q psy10669        266 KVELVLEEIAIACNKN-TGISLA  287 (337)
Q Consensus       266 ~~~~~L~~~gI~v~~~-~girig  287 (337)
                      .+.+.+.+.||.+.+. ..+||.
T Consensus       401 ~i~~~~~~~Gll~~~~g~~l~~~  423 (453)
T PRK06943        401 RFFEAALERELLLRPIGTTVYLM  423 (453)
T ss_pred             HHHHHHHHCCcEEEecCCEEEEe
Confidence            4556666789998763 246665

>KOG2040|consensus

Probab=96.34  E-value=0.088  Score=54.41  Aligned_cols=152  Identities=16%  Similarity=0.177  Sum_probs=95.8

Q ss_pred             cEEEEcCcccc-cccChHHHHHHhhhcCCeEEEeccccccccc----e-----ee-----eec--cC--C----chhh-h
Q psy10669        125 DFLSSGTTCYS-RCLDYARFRQICDETDSIMFADMSHISGLIA----G-----VK-----GVT--KT--G----EKIL-Y  180 (337)
Q Consensus       125 klII~~~S~~~-~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~----g-----~~-----~T~--~~--G----g~i~-~  180 (337)
                      .+.|.-+|-++ +.-+++++.+|.+++|--++.|.|..-.-+|    |     |+     -|+  |.  |    |=|. .
T Consensus       683 a~MvTYPST~GvfE~~i~d~cd~iHehGGQVYlDGANMNAqVGlc~pGd~GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK  762 (1001)
T KOG2040|consen  683 ALMVTYPSTHGVFEEGIDDICDIIHEHGGQVYLDGANMNAQVGLCRPGDIGADVCHLNLHKTFCIPHGGGGPGMGPIGVK  762 (1001)
T ss_pred             eeEEecccccccccccHHHHHHHHHhcCCEEEecCCCccceecccCCccccccceeecccceeeecCCCCCCCCCccchh
Confidence            45555588887 8888999999999999999999998765554    1     11     111  22  1    2221 1


Q ss_pred             -hHHHHHh--hccCCCC--------------CCCCcHHHHHHHHHHHHHHhch-hhHHHHHHHHHHHHHHHHHHHhCCCE
Q psy10669        181 -DYEEKIN--NAVFPSL--------------QGGPHNHAIGAIATAMLQAQSD-EFKSYQAQVKANASHLSDEMIKRGYH  242 (337)
Q Consensus       181 -~l~~~i~--~~~~p~~--------------~g~~~~~~iaala~a~~e~~~~-~~~~y~~~v~~na~~l~~~L~~~G~~  242 (337)
                       .|++.+-  +-+.|+-              +|++   .|..+.-+...|+-. ..++--+-.+-||+|++++|+.. |+
T Consensus       763 ~HLapfLP~HpVvs~~~~~~~~~~gsVsaaP~Gsa---~ILpISwaYikmMG~~GL~~as~~AiLNaNYMakRLe~h-Yk  838 (1001)
T KOG2040|consen  763 KHLAPFLPSHPVVSPGRPEDTSPVGSVSAAPWGSA---LILPISWAYIKMMGSGGLKDASKIAILNANYMAKRLESH-YK  838 (1001)
T ss_pred             hhccccCCCCCccCCCCCCCCCCccceeccCCCcc---eeehhHHHHHHHhcccccchhhHHHhhhhHHHHHHHhhc-cc
Confidence             2333221  1111110              2332   233334444445433 33555666788999999999886 55


Q ss_pred             Eec---CCCCCeEEEEEecC----CCcchHHHHHHHhhcCceecc
Q psy10669        243 VVT---GGTDVHLILIDLRK----NKLTGSKVELVLEEIAIACNK  280 (337)
Q Consensus       243 v~~---~~t~~h~v~V~~~~----~~~~~~~~~~~L~~~gI~v~~  280 (337)
                      ++.   .+.--|=.++|++.    .|+.+.+++++|..+|+-...
T Consensus       839 il~~~~~~~vaHEFIlD~r~fK~~agieavDvAKRL~DYgFHaPT  883 (1001)
T KOG2040|consen  839 ILFRGENGLVAHEFILDLRPFKKTAGIEAVDVAKRLMDYGFHAPT  883 (1001)
T ss_pred             eeEecCCcceeeeeeeechhhccccCCcHHHHHHHHHhccCCCCc
Confidence            554   34678889999875    457788999999999987654

>KOG0629|consensus

Probab=96.31  E-value=0.13  Score=50.81  Aligned_cols=128  Identities=19%  Similarity=0.236  Sum_probs=75.6

Q ss_pred             ccEEEEc--CcccccccChHHHHHHhhhcCCeEEEeccccccccc---------ee------e-eecc-CC------chh
Q psy10669        124 FDFLSSG--TTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA---------GV------K-GVTK-TG------EKI  178 (337)
Q Consensus       124 pklII~~--~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~---------g~------~-~T~~-~G------g~i  178 (337)
                      |-++-++  .++|+.--|+..+.+||++|+.++.||+|.+-|++-         |+      + ..|| .|      .++
T Consensus       254 Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmHvDAAwGGglLmS~k~R~kl~Giera~SvtwnpHK~~gaplqCsa~l  333 (510)
T KOG0629|consen  254 PFFVNATAGTTVLGAFDDLNGIADICEKHKLWMHVDAAWGGGLLMSRKHRHKLTGIERANSVTWNPHKLMGAPLQCSAFL  333 (510)
T ss_pred             CeEEEecCCceeeeccCcHHHHHHHHHhcCEEEEeecccccccccChhhHhhccCccccCceeecHHHhhcCcchhhHHH
Confidence            5555554  566899999999999999999999999999998876         21      1 1111 12      222


Q ss_pred             hh--hHHHHHh---------hcc-----C----CCCCCCCcHHHH-HHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHH
Q psy10669        179 LY--DYEEKIN---------NAV-----F----PSLQGGPHNHAI-GAIATAMLQAQSDEFKSYQAQVKANASHLSDEMI  237 (337)
Q Consensus       179 ~~--~l~~~i~---------~~~-----~----p~~~g~~~~~~i-aala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~  237 (337)
                      ..  .+-+..+         +..     |    -.+|-+-|.... ..+-.-.+-  ...|+...++..++|+||.++|+
T Consensus       334 ~r~~gll~~Cn~~~A~YLFq~dK~YdvS~DTgdK~iQCGRh~D~FKlWlmwkaKG--~~Gfe~~v~k~~~lA~yl~~~lr  411 (510)
T KOG0629|consen  334 TREEGLLQRCNQMSAIYLFQQDKFYDVSYDTGDKAIQCGRHVDVFKLWLMWKAKG--TQGFEAQVDKCLRLAEYLYDRLR  411 (510)
T ss_pred             HHHHHHHHhhcccchhhhhccCceeecccccccchhhcCccccHHHHHHHHHhcc--cccHHHHHHHHHHHHHHHHHHHH
Confidence            21  1111111         100     0    112344344433 222222222  35678889999999999999999


Q ss_pred             hC-CCEEecCCCCCeEE
Q psy10669        238 KR-GYHVVTGGTDVHLI  253 (337)
Q Consensus       238 ~~-G~~v~~~~t~~h~v  253 (337)
                      ++ |+..+-.....|..
T Consensus       412 er~~~~~l~~~~pe~~n  428 (510)
T KOG0629|consen  412 EREGFEMLFELEPEHVN  428 (510)
T ss_pred             hcccceehhcCCCceEE
Confidence            95 55655432233444

>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type

Probab=96.31  E-value=0.12  Score=51.54  Aligned_cols=144  Identities=10%  Similarity=0.063  Sum_probs=75.1

Q ss_pred             hHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeecc-------CCchhhh-hHHHHHhhccCCCCCCCC
Q psy10669        140 YARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTK-------TGEKILY-DYEEKINNAVFPSLQGGP  198 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~-------~Gg~i~~-~l~~~i~~~~~p~~~g~~  198 (337)
                      +++|+++|+++|++||+|+.++ .|-.+        +    +.+..|       -|+++.. ++.+.+.......++ +.
T Consensus       220 l~~l~~lc~~~gillI~DEV~tg~gr~g~~~a~~~~~~~pDi~~lsK~l~~G~pig~v~~~~~i~~~~~~~~~~~T~-~~  298 (420)
T TIGR00700       220 VPALLDWCREHGIVFIADEVQTGFARTGAMFACEHEGPEPDLITTAKSLADGLPLSGVTGRAEIMDAPAPGGLGGTY-AG  298 (420)
T ss_pred             HHHHHHHHHHcCCEEEEEecccCCcccchhHHHhhcCCCCCEEEeeccccCCcceEEEEecHHHHhhcCCCCcCCCC-Cc
Confidence            7789999999999999999975 22222        1    111112       2222222 455555443333334 34


Q ss_pred             cHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC----C-CEEecCCCCCeEEEEEecCCC--c-c---hHHH
Q psy10669        199 HNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR----G-YHVVTGGTDVHLILIDLRKNK--L-T---GSKV  267 (337)
Q Consensus       199 ~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~----G-~~v~~~~t~~h~v~V~~~~~~--~-~---~~~~  267 (337)
                      ++...++..+++..+.+.   .+.+++.+..++|++.|.+.    + +.-+.+ . .-+..+.+.+..  . +   ...+
T Consensus       299 ~pl~~aaa~a~l~~l~~~---~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg-~-G~~~~i~~~~~~~~~~~~~~~~~l  373 (420)
T TIGR00700       299 NPLACAAALAVLAIIESE---GLIERARQIGRLVTDRLTTLKAVDPRIGDVRG-L-GAMIAVELVDPGTTEPDAGLAERI  373 (420)
T ss_pred             CHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHhhCCCEEEeec-c-ceEEEEEEecCCCCCccHHHHHHH
Confidence            555555555556554332   45666666667777777652    2 111111 2 334445442211  0 1   2233


Q ss_pred             HHHHhhcCceeccCc----ccchhhh
Q psy10669        268 ELVLEEIAIACNKNT----GISLAAE  289 (337)
Q Consensus       268 ~~~L~~~gI~v~~~~----girig~~  289 (337)
                      ...+.+.||.+.+..    .|||.-+
T Consensus       374 ~~~~~~~Gv~i~p~~~f~~~lRl~p~  399 (420)
T TIGR00700       374 ATAAHAAGLLLLTCGMFGNIIRFLPP  399 (420)
T ss_pred             HHHHHHCCeEEeccCCCCCEEEEECC
Confidence            344456799987632    5777644

Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.

>PRK09440 avtA valine--pyruvate transaminase; Provisional

Probab=96.30  E-value=0.14  Score=50.60  Aligned_cols=152  Identities=6%  Similarity=-0.024  Sum_probs=79.5

Q ss_pred             ccEEEEcCccc--ccccChHH---HHHHhhhcCCeEEEeccccc--------cccc------eeeeec-c------CCch
Q psy10669        124 FDFLSSGTTCY--SRCLDYAR---FRQICDETDSIMFADMSHIS--------GLIA------GVKGVT-K------TGEK  177 (337)
Q Consensus       124 pklII~~~S~~--~~~~d~~~---l~eia~~~ga~l~vD~AH~~--------Gli~------g~~~T~-~------~Gg~  177 (337)
                      +++|++..-.+  +...+.++   |.++|+++++++++|+++..        ....      .+.+|. |      +-|+
T Consensus       180 ~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~pGlRiG~  259 (416)
T PRK09440        180 TGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGIIFSEATPLWNPNIILCMSLSKLGLPGVRCGI  259 (416)
T ss_pred             ceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCcchhhcCccccCCeEEEecccccCCCcceEEE
Confidence            45555542234  36666555   44678899999999999852        1111      112332 2      2355


Q ss_pred             hhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHH-----HHHHHHHHHHHHHHHHHh----CCCEEecC
Q psy10669        178 ILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKS-----YQAQVKANASHLSDEMIK----RGYHVVTG  246 (337)
Q Consensus       178 i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~-----y~~~v~~na~~l~~~L~~----~G~~v~~~  246 (337)
                      ++.  ++.+.+.....+... +++.....+++.++..   .++..     .++...++.+.+.+.|.+    .++.+...
T Consensus       260 ~i~~~~l~~~~~~~~~~~~~-~~s~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~~~~~~~p  335 (416)
T PRK09440        260 VIADEEIIEALSNMNGIISL-APGRLGPAIAAEMIES---GDLLRLSETVIRPFYRQKVQLAIALLRRYLPDEPCLIHKP  335 (416)
T ss_pred             EeCCHHHHHHHHHHHHHhcc-CCCcHHHHHHHHHhcc---chHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCeEEecC
Confidence            544  466655543222212 2333333333343321   12221     122233444445555544    35655432


Q ss_pred             CCCCeEEEEEecCCCcchHHHHHHHhhcCceecc
Q psy10669        247 GTDVHLILIDLRKNKLTGSKVELVLEEIAIACNK  280 (337)
Q Consensus       247 ~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~  280 (337)
                       ..+-.+++++...+.+..++.+.|.+.||.+.+
T Consensus       336 -~gg~fiw~~~~~~~~~~~~~~~~l~~~gV~v~p  368 (416)
T PRK09440        336 -EGAIFLWLWFKDLPITTEELYQRLKARGVLVVP  368 (416)
T ss_pred             -CCceEEEEECCCCCCCHHHHHHHHHHCCEEEec
Confidence             235567788865344667788888889999876

>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]

Probab=96.23  E-value=0.4  Score=48.38  Aligned_cols=179  Identities=12%  Similarity=0.072  Sum_probs=100.3

Q ss_pred             eeecCCCc-hhHHHHHHhhCCc-----------------------------------------ccc---cccEEEEcCcc
Q psy10669         99 NVQPYSGS-PANFAVCEKALPT-----------------------------------------NNA---RFDFLSSGTTC  133 (337)
Q Consensus        99 ~v~~~Sgt-~AN~~v~~aLl~~-----------------------------------------~~a---~pklII~~~S~  133 (337)
                      +|..+||+ +|...+...+++|                                         +..   +||++++.++.
T Consensus       157 ~IiiT~G~q~al~l~~~~l~~pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P~~  236 (459)
T COG1167         157 QIVITSGAQQALDLLLRLLLDPGDTVLVEDPTYPGALQALEALGARVIPVPVDEDGIDPEALEEALAQWKPKAVYVTPTF  236 (459)
T ss_pred             eEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcEEEECCCC
Confidence            58899995 6777777888765                                         111   38999998655


Q ss_pred             -c--ccccChH---HHHHHhhhcCCeEEEecccccc---------ccc-------eeeeecc-------CCchhhh--hH
Q psy10669        134 -Y--SRCLDYA---RFRQICDETDSIMFADMSHISG---------LIA-------GVKGVTK-------TGEKILY--DY  182 (337)
Q Consensus       134 -~--~~~~d~~---~l~eia~~~ga~l~vD~AH~~G---------li~-------g~~~T~~-------~Gg~i~~--~l  182 (337)
                       |  +...+.+   +|-++|+++++++|=|+..+-=         +.+       ..++|+.       +-|+++.  ++
T Consensus       237 qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~gSFSK~l~PglRlG~vv~p~~~  316 (459)
T COG1167         237 QNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFSKTLAPGLRLGYVVAPPEL  316 (459)
T ss_pred             CCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCCCCCEEEEeeehhhcccccceeeeeCCHHH
Confidence             3  3444544   4779999999999999985430         111       1244542       3477775  55


Q ss_pred             HHHHhhc-cCCCCCCCCcHHHHHHHHHHHHH-HhchhhHHHHHHHHHHHHHHHHHHHhCCCEEec--CCCCCeEEEEEec
Q psy10669        183 EEKINNA-VFPSLQGGPHNHAIGAIATAMLQ-AQSDEFKSYQAQVKANASHLSDEMIKRGYHVVT--GGTDVHLILIDLR  258 (337)
Q Consensus       183 ~~~i~~~-~~p~~~g~~~~~~iaala~a~~e-~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~--~~t~~h~v~V~~~  258 (337)
                      .+++... ..-. . ++......+++.-+.+ ..+..-+..++...+.-+++.+.|.+.+-....  .....-.+++.+.
T Consensus       317 ~~~~~~~k~~~~-~-~~s~~~Q~~la~~l~~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~gG~flwl~l~  394 (459)
T COG1167         317 IEKLLRLKQAAD-L-GPSSLSQAALAAFLLSGHYDRHLRRLRREYARRRDALLEALAEYLPELATWTRPEGGLFLWLELP  394 (459)
T ss_pred             HHHHHHHHHHhc-C-CCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecCCceEEEEEEcC
Confidence            5544432 1111 1 2222222333222221 011222444555555666677777775432221  2222345566665


Q ss_pred             CCCcchHHHHHHHhhcCceecc
Q psy10669        259 KNKLTGSKVELVLEEIAIACNK  280 (337)
Q Consensus       259 ~~~~~~~~~~~~L~~~gI~v~~  280 (337)
                      . +++..++...+.+.|+.+.+
T Consensus       395 ~-~~~~~~l~~~a~~~gv~i~~  415 (459)
T COG1167         395 E-GIDARELLAAALEKGVVVTP  415 (459)
T ss_pred             C-CCCHHHHHHHHHHCCCEEEc
Confidence            5 45777777777777888776

>PRK08088 4-aminobutyrate aminotransferase; Validated

Probab=96.21  E-value=0.18  Score=50.24  Aligned_cols=158  Identities=15%  Similarity=0.127  Sum_probs=88.3

Q ss_pred             ccEEEEcCcccccccC-------hHHHHHHhhhcCCeEEEeccccccc--cc--------ee---eeec-c--CCch---
Q psy10669        124 FDFLSSGTTCYSRCLD-------YARFRQICDETDSIMFADMSHISGL--IA--------GV---KGVT-K--TGEK---  177 (337)
Q Consensus       124 pklII~~~S~~~~~~d-------~~~l~eia~~~ga~l~vD~AH~~Gl--i~--------g~---~~T~-~--~Gg~---  177 (337)
                      ...||+. .++++.+.       .++|.++|+++|+++|.|+.|. |+  .+        ++   ..|. |  .||+   
T Consensus       200 ~aavi~E-pi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~-g~g~~g~~~~~~~~~~~pdi~s~sK~l~~G~rig  277 (425)
T PRK08088        200 IAAIIIE-PVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQT-GAGRTGTLFAMEQMGVAADLTTFAKSIAGGFPLA  277 (425)
T ss_pred             eEEEEEC-cccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCcchhHHhhcCCCCCEEEEeccccCCCcce
Confidence            3566665 35554433       4568899999999999999988 32  11        10   1222 2  1333   


Q ss_pred             -hhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh----CCC-EEecCCCC
Q psy10669        178 -ILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK----RGY-HVVTGGTD  249 (337)
Q Consensus       178 -i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~----~G~-~v~~~~t~  249 (337)
                       ++.  ++.+.+........+ +.++...++....+....   .....+++.+..+++.+.|.+    .+. .-+.+ . 
T Consensus       278 ~v~~~~~~~~~~~~~~~~~t~-~~~~~~~~a~~~~l~~~~---~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g-~-  351 (425)
T PRK08088        278 GVTGRAEVMDAIAPGGLGGTY-AGNPIACAAALAVLKVFE---QENLLQKANALGEKLKDGLLAIAEKHPEIGDVRG-L-  351 (425)
T ss_pred             eeEecHHHHhhcCCCCCCCCC-CcCHHHHHHHHHHHHHHH---hcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEec-c-
Confidence             333  566666554443333 345556666656565543   235666777777777777665    222 11111 2 


Q ss_pred             CeEEEEEecCC-------CcchHHHHHHHhhcCceeccC----cccchhhh
Q psy10669        250 VHLILIDLRKN-------KLTGSKVELVLEEIAIACNKN----TGISLAAE  289 (337)
Q Consensus       250 ~h~v~V~~~~~-------~~~~~~~~~~L~~~gI~v~~~----~girig~~  289 (337)
                      .-+++|.+...       ......+...|.+.||.+.+.    ..|||+.+
T Consensus       352 G~~~~l~l~~~~~~~~p~~~~~~~l~~~~~~~Gv~~~~~~~~~~~iRl~~~  402 (425)
T PRK08088        352 GAMIAIELFEDGDHSKPNAKLTAQIVARARDKGLILLSCGPYYNVLRILVP  402 (425)
T ss_pred             ceEEEEEEecCCCCCCCCHHHHHHHHHHHHhCCCEEecCCCCCCEEEEECC
Confidence            44567777321       112455666666779876532    26777654

>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]

Probab=96.14  E-value=1.3  Score=42.22  Aligned_cols=153  Identities=12%  Similarity=0.029  Sum_probs=97.6

Q ss_pred             ccEEEEc-Cc----ccccccChHHHHHHhhhcCCeEEEeccccccccc--------------eeeeec-c------CCch
Q psy10669        124 FDFLSSG-TT----CYSRCLDYARFRQICDETDSIMFADMSHISGLIA--------------GVKGVT-K------TGEK  177 (337)
Q Consensus       124 pklII~~-~S----~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~--------------g~~~T~-~------~Gg~  177 (337)
                      .-.|+++ +.    +...+..+.+|..+|+++|+.|++|-|-+.-+=+              .+|... |      +-|+
T Consensus       180 ~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~iifsd~~~~w~~NiilC~SLSK~GLPG~R~GI  259 (417)
T COG3977         180 TGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGIIFSDATPLWNENIILCMSLSKLGLPGSRCGI  259 (417)
T ss_pred             cceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCceecccccccCCCCEEEEeehhhcCCCCcceeE
Confidence            3456654 22    2457777888889999999999999996654333              123322 2      3466


Q ss_pred             hhh--hHHHHHhh-----ccCCCCCCCCcHHHHHHHHHHHHHHhc---hh-hHHHHHHHHHHHHHHHHHHHhCCCEEecC
Q psy10669        178 ILY--DYEEKINN-----AVFPSLQGGPHNHAIGAIATAMLQAQS---DE-FKSYQAQVKANASHLSDEMIKRGYHVVTG  246 (337)
Q Consensus       178 i~~--~l~~~i~~-----~~~p~~~g~~~~~~iaala~a~~e~~~---~~-~~~y~~~v~~na~~l~~~L~~~G~~v~~~  246 (337)
                      ++.  .+.+.+.+     ++-|+..|    ++||+-.+-.-++++   .- -+-|++++..-...|+.+|-+.-+.+.. 
T Consensus       260 iIane~viqaitnmn~iisLap~~~G----~Aia~~mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~~lp~~~~~iHk-  334 (417)
T COG3977         260 IIANEKVIQAITNMNGIISLAPGRMG----PAIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIAILRRYLPEYRCLIHK-  334 (417)
T ss_pred             EEccHHHHHHHHhccceeeecCCCcc----HHHHHHHhhcchHHHHHHHhhhHHHHHHHHHHHHHHHHhcCccceeeec-
Confidence            665  34443332     23344333    666665544333221   11 1457777777778888888887787876 


Q ss_pred             CCCCeEEEEE-ecCCCcchHHHHHHHhhcCceeccCc
Q psy10669        247 GTDVHLILID-LRKNKLTGSKVELVLEEIAIACNKNT  282 (337)
Q Consensus       247 ~t~~h~v~V~-~~~~~~~~~~~~~~L~~~gI~v~~~~  282 (337)
                       .+.-|.++. +.+..++..++..+|.+.|+.+-+-.
T Consensus       335 -pEGAIFlWLWf~dLPItt~~LYq~LKa~Gvl~VPG~  370 (417)
T COG3977         335 -PEGAIFLWLWFKDLPITTEELYQRLKARGVLMVPGH  370 (417)
T ss_pred             -CCcceeehhhhccCCCCHHHHHHHHHhCeEEEeccc
Confidence             455565544 67778899999999999999887644

>KOG1404|consensus

Probab=96.12  E-value=0.033  Score=54.28  Aligned_cols=151  Identities=13%  Similarity=0.145  Sum_probs=82.0

Q ss_pred             cccChHHHHHHhhhcCCeEEEeccccc-cccc---e----------------eeeeccCCchhhh-hHHHHHhhcc-CCC
Q psy10669        136 RCLDYARFRQICDETDSIMFADMSHIS-GLIA---G----------------VKGVTKTGEKILY-DYEEKINNAV-FPS  193 (337)
Q Consensus       136 ~~~d~~~l~eia~~~ga~l~vD~AH~~-Gli~---g----------------~~~T~~~Gg~i~~-~l~~~i~~~~-~p~  193 (337)
                      -.+=+++.+++|+++|.++|.|+.|+. |=.+   |                +..-.|-|+++.+ ++++-+++.. +-.
T Consensus       231 p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG~~wgfe~h~v~PDIvTmAKgiGnG~Pl~AVvtt~EIa~v~~~~~~~fn  310 (442)
T KOG1404|consen  231 PPGYLKAAYKVVRKRGGLFIADEVQTGFGRTGHMWGFESHGVVPDIVTMAKGIGNGFPLGAVVTTPEIADVLNQKSSHFN  310 (442)
T ss_pred             CchHHHHHHHHHHHcCCEEEehhhhhccccccccccccccCCCccHHHHHhhccCCCcceeeecCHHHHHHHHhcccccc
Confidence            445566788999999999999999874 2222   1                1111255777766 7888777655 333


Q ss_pred             CCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh--CCCEEecC--CCCCe--EEEEEecCCC-----c
Q psy10669        194 LQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK--RGYHVVTG--GTDVH--LILIDLRKNK-----L  262 (337)
Q Consensus       194 ~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~--~G~~v~~~--~t~~h--~v~V~~~~~~-----~  262 (337)
                      ++|+..+...+|  .+.+++..  -+..+++..+-..+|.+.|.+  .+++++++  |.-=-  +=+|+-+.+.     .
T Consensus       311 TyggnP~a~avg--~aVL~Vik--ee~LqE~aa~vG~yl~~~l~~l~d~h~iIGdVRG~GLm~GvE~V~dk~~~~pp~~~  386 (442)
T KOG1404|consen  311 TYGGNPVACAVG--LAVLKVIK--EENLQENAAEVGSYLLEKLAALKDKHPIIGDVRGRGLMLGVELVSDKSEPKPPATA  386 (442)
T ss_pred             ccCCCchhHHHH--HHHHHHHH--HHhHHHHHHHHHHHHHHHHHHHhhcCCceeecccceeEEEEEEecccCCCCCcchH
Confidence            454444433333  44455543  123444444445555555554  34555541  11000  1122222111     1


Q ss_pred             chHHHHHHHhhcCceeccCc----ccchhhhh
Q psy10669        263 TGSKVELVLEEIAIACNKNT----GISLAAEI  290 (337)
Q Consensus       263 ~~~~~~~~L~~~gI~v~~~~----girig~~~  290 (337)
                      -+..+.+.+.+.|+.|++-.    -+||.=|.
T Consensus       387 ~~~~i~~~cke~Gvlvg~g~i~G~vfriaPPl  418 (442)
T KOG1404|consen  387 EGAVIGEQCKELGVLVGKGGIHGNVFRIAPPL  418 (442)
T ss_pred             HHHHHHHHHHHhCeeeecccccceEEEecCCe
Confidence            23456677778899998755    57776553

>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=96.09  E-value=0.13  Score=52.05  Aligned_cols=146  Identities=13%  Similarity=0.106  Sum_probs=72.9

Q ss_pred             hHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeecc--CCch------hhh-hHHHHHhhc-----cCC
Q psy10669        140 YARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTK--TGEK------ILY-DYEEKINNA-----VFP  192 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~--~Gg~------i~~-~l~~~i~~~-----~~p  192 (337)
                      ++.++++|+++|++||+|+-++ .|-.+        |    +...+|  .||+      +.. ++.+.+...     .+.
T Consensus       260 l~~lr~lc~~~gillI~DEV~TGfGRtG~~~a~e~~gv~PDiv~~gKgl~gG~~Plaav~~~~ei~~~~~~~~~~~~~~h  339 (472)
T PRK08742        260 LRRARELCDAHGAFLIADEIATGFGRTGTLFACEQAGVMPDLLCLSKGLTGGFLPLSAVLATQQLYDAFLDDSRERAFLH  339 (472)
T ss_pred             HHHHHHHHHHcCCEEEEechhhCCCCCccchHHHhcCCCCCEEEEcccccCCCCCcceeeccHHHHHHhhccCccCccCc
Confidence            4568899999999999999986 45444        1    112223  2454      222 454444321     111


Q ss_pred             -CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecC-CCCCeEEEEEecCCCc-------
Q psy10669        193 -SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTG-GTDVHLILIDLRKNKL-------  262 (337)
Q Consensus       193 -~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~-~t~~h~v~V~~~~~~~-------  262 (337)
                       .++ +.|+...|+....+..+.++   ...+++.+..++|.+.+... .+.++.. -...-+.-|.+....-       
T Consensus       340 ~~T~-~gnpl~~Aaa~a~L~~i~~~---~l~~~~~~~g~~l~~~~~~~~~~~~i~dvRG~Gl~~giel~~~~~~~~~~~~  415 (472)
T PRK08742        340 SHSY-TGNPLACAAALATLDIFADD---DVIARNQPTAARMTQLAAQIGEHPHVADVRQAGMVVAFELTRGGNKRTPFPP  415 (472)
T ss_pred             CCCC-CccHHHHHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHhcCCCeeeEeccceEEEEEeccCccccccCCc
Confidence             122 24566666666666655432   34555555566665444331 1222210 0112233333322110       


Q ss_pred             c---hHHHHHHHhhcCceeccC-cccchhhh
Q psy10669        263 T---GSKVELVLEEIAIACNKN-TGISLAAE  289 (337)
Q Consensus       263 ~---~~~~~~~L~~~gI~v~~~-~girig~~  289 (337)
                      +   +..+.+.+.+.||.+.+. .-|||.-|
T Consensus       416 ~~~~~~~~~~~~~~~Gll~~~~g~vi~~~Pp  446 (472)
T PRK08742        416 AARVGLHAYRAALARGVVLRPLGDVLYWMPP  446 (472)
T ss_pred             hhHHHHHHHHHHHHCCeEEEecCCEEEEECC
Confidence            0   134455566779998764 25666544

>PRK06148 hypothetical protein; Provisional

Probab=96.02  E-value=0.087  Score=58.34  Aligned_cols=146  Identities=10%  Similarity=0.115  Sum_probs=79.5

Q ss_pred             hHHHHHHhhhcCCeEEEecccc-ccccc---------e----eeeec-------cCCchhhh-hHHHHHhhcc-CCCCCC
Q psy10669        140 YARFRQICDETDSIMFADMSHI-SGLIA---------G----VKGVT-------KTGEKILY-DYEEKINNAV-FPSLQG  196 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~-~Gli~---------g----~~~T~-------~~Gg~i~~-~l~~~i~~~~-~p~~~g  196 (337)
                      ++.++++|+++|+++|+|+-|+ .|=.|         |    ++..+       |-|+++.. ++.+.+++.. +-++++
T Consensus       807 l~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDivt~gK~lggG~Plgav~~~~ei~~~~~~g~~~~~Tf~  886 (1013)
T PRK06148        807 LREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDIVTMGKPIGNGHPMGAVVTTREIADSFDNGMEYFNTFG  886 (1013)
T ss_pred             HHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCCCcceeeecccccCCcceEEEEEcHHHHhhccCCCccccCCC
Confidence            5678999999999999999985 44333         1    11112       23344433 5666555432 223343


Q ss_pred             CCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCEEecC-CCCCeEEEEEecCCC----cc---hHH
Q psy10669        197 GPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYHVVTG-GTDVHLILIDLRKNK----LT---GSK  266 (337)
Q Consensus       197 ~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~v~~~-~t~~h~v~V~~~~~~----~~---~~~  266 (337)
                       .|+...|+..+.+..+.+   +...+++.+..++|.++|++.  .+.+++. -...-++-|.+....    -+   ...
T Consensus       887 -gnpla~aaa~a~L~~i~~---e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Gl~~gvel~~~~~~~~~~~~~~~~  962 (1013)
T PRK06148        887 -GNPVSCAIGLAVLDIIED---EDLQRNALEIGNYLLAGLRELQDRFDIIGDVRGMGLFLGIELVTDRKTKAPATAIARY  962 (1013)
T ss_pred             -CCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHHhCCCceEEeeeceEEEEEecCCccccCccHHHHHH
Confidence             355555555555555532   256788888888888888772  2222210 011223334443211    01   234


Q ss_pred             HHHHHhhcCceeccCc----ccchhhh
Q psy10669        267 VELVLEEIAIACNKNT----GISLAAE  289 (337)
Q Consensus       267 ~~~~L~~~gI~v~~~~----girig~~  289 (337)
                      +...|.+.||.+....    -|||.-+
T Consensus       963 i~~~~~~~Gvl~~~~g~~~~vlr~~Pp  989 (1013)
T PRK06148        963 VKNGARERGILIGTEGPHDNVLKIRPP  989 (1013)
T ss_pred             HHHHHHhCCeEEeccCCCCCEEEEeCC
Confidence            4555666799997532    4666544

>PRK09275 aspartate aminotransferase; Provisional

Probab=95.99  E-value=0.83  Score=47.01  Aligned_cols=38  Identities=16%  Similarity=0.097  Sum_probs=25.5

Q ss_pred             ccEEEE-cCcc-cccccChHH---HHHHhhh--cCCeEEEecccc
Q psy10669        124 FDFLSS-GTTC-YSRCLDYAR---FRQICDE--TDSIMFADMSHI  161 (337)
Q Consensus       124 pklII~-~~S~-~~~~~d~~~---l~eia~~--~ga~l~vD~AH~  161 (337)
                      +|+|++ ++++ -+...+-++   |.++|++  ++.+++.|++..
T Consensus       242 tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~  286 (527)
T PRK09275        242 IKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYG  286 (527)
T ss_pred             CCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCCh
Confidence            677665 4544 247777555   5566743  599999999864

>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen)

Probab=95.97  E-value=0.19  Score=49.42  Aligned_cols=148  Identities=16%  Similarity=0.194  Sum_probs=89.9

Q ss_pred             ccEEEEcCcc--cccccC-hHHHHHHhhhcCCeEEEeccccc---------------cccce-eeeec-----cCCchhh
Q psy10669        124 FDFLSSGTTC--YSRCLD-YARFRQICDETDSIMFADMSHIS---------------GLIAG-VKGVT-----KTGEKIL  179 (337)
Q Consensus       124 pklII~~~S~--~~~~~d-~~~l~eia~~~ga~l~vD~AH~~---------------Gli~g-~~~T~-----~~Gg~i~  179 (337)
                      +.+.|++..+  +|+.-| +.+|.+||+++|++.+|.-|=+.               |-+.. +.+|.     |.||-++
T Consensus       155 ~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~~~~~~i~~a~~~GRvda~vqS~dkNF~VPvGgai~  234 (389)
T PF05889_consen  155 NILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSSKCMHLIQQAWRVGRVDAFVQSTDKNFMVPVGGAIM  234 (389)
T ss_dssp             GEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-HHHHHHHHHHHHHSTCSEEEEEHHHHHCEESSHEEE
T ss_pred             CeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhHHHHHHHHHHHHhcCCcceeeeecCCCEEecCCCcEE
Confidence            5666666433  588888 99999999999999999999887               77773 56665     4676665


Q ss_pred             h----hHHHHHhhccCCCCCCC-CcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh----CCCEEecCCCCC
Q psy10669        180 Y----DYEEKINNAVFPSLQGG-PHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK----RGYHVVTGGTDV  250 (337)
Q Consensus       180 ~----~l~~~i~~~~~p~~~g~-~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~----~G~~v~~~~t~~  250 (337)
                      +    .+...+... ||+..+. |...    +...++.+-...|....++..++=.+|.++|++    .|-.+. ....|
T Consensus       235 As~~~~~i~~vs~~-YpGRas~sp~ld----~~itLl~LG~~g~~~ll~~r~~~f~~l~erl~~~aee~~e~ll-~~p~N  308 (389)
T PF05889_consen  235 ASFDPSGILAVSKE-YPGRASASPSLD----LFITLLSLGCTGYGALLKERKASFPYLKERLKKWAEEVGERLL-ETPRN  308 (389)
T ss_dssp             EESSHHHHHHHHHT-SHSHBTSHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEBS-SSTT-
T ss_pred             EecCHHHHHHHHHH-hhhhhhcccchH----HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc-CCCCC
Confidence            4    355566654 7887433 3222    334444444456677777777777777777776    564443 22467


Q ss_pred             eEEE-EEecCCC----cchHHHHHHHhhcCce
Q psy10669        251 HLIL-IDLRKNK----LTGSKVELVLEEIAIA  277 (337)
Q Consensus       251 h~v~-V~~~~~~----~~~~~~~~~L~~~gI~  277 (337)
                      |+.+ +++....    -+...+...|...||.
T Consensus       309 ~is~a~tl~~l~~~~~k~~~~lgs~Lf~R~Vs  340 (389)
T PF05889_consen  309 HISMAFTLDTLYEISQKDGTFLGSMLFKRGVS  340 (389)
T ss_dssp             SSEEEEE-TTCCTCCSSHHHHHHHHHHHTTEE
T ss_pred             CeeEEEECccchhhccchhhhHHHHHHhCCcc
Confidence            7643 3333211    1346777888876664

Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.

>PRK06918 4-aminobutyrate aminotransferase; Reviewed

Probab=95.95  E-value=0.09  Score=52.85  Aligned_cols=147  Identities=10%  Similarity=0.053  Sum_probs=74.8

Q ss_pred             hHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeecc-------CCchhhh-hHHHHHhhccCCCCCCCC
Q psy10669        140 YARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTK-------TGEKILY-DYEEKINNAVFPSLQGGP  198 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~-------~Gg~i~~-~l~~~i~~~~~p~~~g~~  198 (337)
                      +++|+++|+++|++||.|+-++ .|-.+        +    +.+..|       -|+++.. ++.+.+.+......+ +.
T Consensus       242 l~~l~~l~~~~gillI~DEV~tg~gr~g~~~a~~~~~v~pDi~t~sK~l~~G~pig~v~~~~~i~~~~~~~~~~~T~-~g  320 (451)
T PRK06918        242 VQEVRNICSEHGILFVADEIQTGFARTGKYFAIEHFDVVPDLITVSKSLGAGVPISGVIGRKEIMDESAPGELGGTY-AG  320 (451)
T ss_pred             HHHHHHHHHHcCCEEEEeccccCcCccCceehhHhcCCCCCEEeeehhhcCCCccEEEEEcHHHHhccCCCCcCcCC-Cc
Confidence            6678999999999999999975 23222        1    111112       1332222 455555433332333 34


Q ss_pred             cHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCEEecC-CCCCeEEEEEec-CC--Cc----chHHHH
Q psy10669        199 HNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYHVVTG-GTDVHLILIDLR-KN--KL----TGSKVE  268 (337)
Q Consensus       199 ~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~v~~~-~t~~h~v~V~~~-~~--~~----~~~~~~  268 (337)
                      ++...++...++..+.+.   ...+++.+..++|.++|++.  ++.++.. ....-+..+.+. +.  ..    ....+.
T Consensus       321 ~~l~~aaa~a~l~~i~~~---~~~~~~~~~g~~l~~~l~~l~~~~~~~~~vrg~G~~~~~~~~~~~~~~~~~~~~~~~l~  397 (451)
T PRK06918        321 SPLGCAAALAVLDIIEKE---NLNDRAIELGKVVMNRFEEMKNKYNCIGDVRGLGAMCAFELVQDRKTKEPDKTLTANIC  397 (451)
T ss_pred             CHHHHHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHhhCCCceeeccceeEEEEEEccCCCcCCCcHHHHHHHH
Confidence            555555555555555332   34555556666777766652  3322110 012223333332 11  11    233444


Q ss_pred             HHHhhcCceeccC----cccchhhhh
Q psy10669        269 LVLEEIAIACNKN----TGISLAAEI  290 (337)
Q Consensus       269 ~~L~~~gI~v~~~----~girig~~~  290 (337)
                      +.|.+.||.+.+.    ..+||+.+.
T Consensus       398 ~~~~~~Gvlv~~~~~~~~~lrl~p~l  423 (451)
T PRK06918        398 KEANKRGLLLLSAGTYGNVIRVLMPL  423 (451)
T ss_pred             HHHHHCCeEEeecCCCCCEEEEECCC
Confidence            5556789999763    257776543

>PRK06855 aminotransferase; Validated

Probab=95.91  E-value=2.1  Score=42.67  Aligned_cols=132  Identities=13%  Similarity=0.073  Sum_probs=68.1

Q ss_pred             cEE-EEcCcc-cccccChHHHH---HHhhhcCCeEEEeccccc----c--ccc---------e-eeeec--------cCC
Q psy10669        125 DFL-SSGTTC-YSRCLDYARFR---QICDETDSIMFADMSHIS----G--LIA---------G-VKGVT--------KTG  175 (337)
Q Consensus       125 klI-I~~~S~-~~~~~d~~~l~---eia~~~ga~l~vD~AH~~----G--li~---------g-~~~T~--------~~G  175 (337)
                      +++ ++++++ -+...+-+++.   ++|+++|++++.|+++.-    |  ...         . +.++.        -+-
T Consensus       173 ~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRi  252 (433)
T PRK06855        173 AGILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRC  252 (433)
T ss_pred             eEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceE
Confidence            444 455543 24777766554   678999999999998641    2  011         1 11221        134


Q ss_pred             chhhh-------hHH---HHHhhccCCCCCCCCcHHHHHHHHHHHHHH-hchhhHHHHHHHHHHHHHHHHHHHhC-CCEE
Q psy10669        176 EKILY-------DYE---EKINNAVFPSLQGGPHNHAIGAIATAMLQA-QSDEFKSYQAQVKANASHLSDEMIKR-GYHV  243 (337)
Q Consensus       176 g~i~~-------~l~---~~i~~~~~p~~~g~~~~~~iaala~a~~e~-~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v  243 (337)
                      |+++.       .+.   +.+......  ..+++.+...+++.++.+- .+...++.++...++.+.+.+.|.+. |+.+
T Consensus       253 G~ii~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~  330 (433)
T PRK06855        253 GWIEVYNADKDEVFKKYINSILNAKMI--EVCSTTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVPGLKV  330 (433)
T ss_pred             EEEEEeCCchhhHHHHHHHHHHHhhcc--ccCCChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCeec
Confidence            66652       122   222222111  1233444555554444221 01123455666777788888888774 7665


Q ss_pred             ecCCCCCeEEEEEecC
Q psy10669        244 VTGGTDVHLILIDLRK  259 (337)
Q Consensus       244 ~~~~t~~h~v~V~~~~  259 (337)
                      .. ...+-.+++++..
T Consensus       331 ~~-p~gg~~~w~~l~~  345 (433)
T PRK06855        331 NR-TNGAFYMTVVFED  345 (433)
T ss_pred             cC-CCeeEEEeecccc
Confidence            43 2234567787764

>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase

Probab=95.86  E-value=0.79  Score=47.11  Aligned_cols=38  Identities=13%  Similarity=0.057  Sum_probs=26.3

Q ss_pred             ccEEE-EcCcc-cccccChHH---HHHHhhhc--CCeEEEecccc
Q psy10669        124 FDFLS-SGTTC-YSRCLDYAR---FRQICDET--DSIMFADMSHI  161 (337)
Q Consensus       124 pklII-~~~S~-~~~~~d~~~---l~eia~~~--ga~l~vD~AH~  161 (337)
                      +|+|+ +++++ -+...+-++   |.++|+++  +.++|.|++..
T Consensus       241 ~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~  285 (521)
T TIGR03801       241 IKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYG  285 (521)
T ss_pred             CcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCch
Confidence            57666 45654 247777555   45668876  99999999864

This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).

>KOG1401|consensus

Probab=95.83  E-value=0.25  Score=48.50  Aligned_cols=95  Identities=16%  Similarity=0.138  Sum_probs=58.0

Q ss_pred             HHHHHhhhcCCeEEEeccccc-cccc--------eee---ee-cc--CCc-----hhhh-hHHHHHhhccC--CCCCCCC
Q psy10669        142 RFRQICDETDSIMFADMSHIS-GLIA--------GVK---GV-TK--TGE-----KILY-DYEEKINNAVF--PSLQGGP  198 (337)
Q Consensus       142 ~l~eia~~~ga~l~vD~AH~~-Gli~--------g~~---~T-~~--~Gg-----~i~~-~l~~~i~~~~~--p~~~g~~  198 (337)
                      .|+.+|+++|++||.|+=+.- |=.+        +++   .| .|  .||     ++.. ++.+.+++.--  .+.+=+.
T Consensus       231 ~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~~PDI~t~aK~L~gGlPigA~~v~~kV~~~i~~~~~l~hg~Tf~g  310 (433)
T KOG1401|consen  231 GLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFGVTPDITTVAKPLGGGLPIGATGVRDKVAEMISPGDHLYHGGTFSG  310 (433)
T ss_pred             HHHHHHhhcCceEEeehhhhCccccchHHHHHHhCcCCcceeehhhccCCceeEEEeehHHHHhhcCCCCccccCcccCC
Confidence            377899999999999999762 2222        110   11 11  234     3333 46666665421  1211133


Q ss_pred             cHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC
Q psy10669        199 HNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR  239 (337)
Q Consensus       199 ~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~  239 (337)
                      |+-+..+...++.++.++   +..++|-+..+.|++.|.+.
T Consensus       311 npLacsa~~~~l~~l~~~---e~~k~vs~~~k~L~~~l~e~  348 (433)
T KOG1401|consen  311 NPLACSAGIKVLDELKDP---ETLKNVSKIGKELRKLLDEY  348 (433)
T ss_pred             ChhhhhHHHHHHHHHcCH---HHHHHHHHHHHHHHHHHHHH
Confidence            455555666667777664   55788888899999998884

>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=95.82  E-value=0.035  Score=56.12  Aligned_cols=144  Identities=15%  Similarity=0.105  Sum_probs=77.8

Q ss_pred             hHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeecc--CCchh------hh-hHHHHHhh------cc-
Q psy10669        140 YARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTK--TGEKI------LY-DYEEKINN------AV-  190 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~--~Gg~i------~~-~l~~~i~~------~~-  190 (337)
                      ++.++++|+++|++||+|+-++ .|=.+        +    +...+|  .||++      .. ++.+.+..      .. 
T Consensus       238 l~~lr~lc~~~g~llI~DEV~TGfGRtG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~  317 (466)
T PRK07030        238 LKLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGIRPDFLCLSKALTGGYLPLAAVLTTDTVYQAFYDDYPTLRAFL  317 (466)
T ss_pred             HHHHHHHHHHcCCEEEEeehhhCcCccccchHHHhcCCCCCEEeeehhccCCcccceEEEecHHHHHHHhcccccccccc
Confidence            5578899999999999999975 44333        1    111122  24542      22 45554432      11 


Q ss_pred             CCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecC-CCCCeEEEEEecCCCc------
Q psy10669        191 FPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTG-GTDVHLILIDLRKNKL------  262 (337)
Q Consensus       191 ~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~-~t~~h~v~V~~~~~~~------  262 (337)
                      ...++ +.|+...|+..+.+..+.+   +...+++.+..++|.+.|++. .+..+.. -...-++-|.+.....      
T Consensus       318 h~~T~-~gnpla~aaa~a~L~~i~~---~~l~~~~~~~G~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~  393 (466)
T PRK07030        318 HSHSY-TGNPLACAAALATLDIFEQ---DNVIENNRALARRMAEATAHLADHPHVAEVRQTGMILAIEMVQDKASKTPYP  393 (466)
T ss_pred             cCCCC-CCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHhcCCCEEEeEeceeEEEEEeccCccccccCc
Confidence            12223 3466666666666666543   246778888888888888763 1222210 0112233444422110      


Q ss_pred             -c---hHHHHHHHhhcCceeccC-cccchh
Q psy10669        263 -T---GSKVELVLEEIAIACNKN-TGISLA  287 (337)
Q Consensus       263 -~---~~~~~~~L~~~gI~v~~~-~girig  287 (337)
                       +   ...+.+.+.+.|+.+.+. ..+|+.
T Consensus       394 ~~~~~~~~i~~~~~~~Gvl~~~~g~~i~~~  423 (466)
T PRK07030        394 WQERRGLKVYQHALERGALLRPLGSVVYFL  423 (466)
T ss_pred             chhHHHHHHHHHHHHCCeEEEecCCEEEEE
Confidence             1   134555666779998763 256664

>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]

Probab=95.80  E-value=0.55  Score=44.65  Aligned_cols=186  Identities=24%  Similarity=0.270  Sum_probs=103.4

Q ss_pred             HHHHHHHhhhhhhccCCC-CCCCcCcCccchH--HHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc-
Q psy10669         44 LAVLECLGSCLQNKYSEG-LPGKRYYGGNQFI--DEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT-  119 (337)
Q Consensus        44 p~V~~a~~~~l~~~y~~g-~~g~r~~~G~~~~--~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~-  119 (337)
                      ..|++|...   .|-++. ..|+.-| |..++  |.||    +--++.||++.+-  +.+|+.|||+|.-.++.++++| 
T Consensus        38 ~kVL~AF~~---~rvs~~hf~~stGY-GydD~GRdtLe----~vyA~vf~aE~a~--VRpq~isGTHAI~~aLfg~LRpg  107 (416)
T COG4100          38 KKVLEAFRH---HRVSESHFTGSTGY-GYDDLGRDTLE----RVYAQVFGAEAAL--VRPQIISGTHAIACALFGILRPG  107 (416)
T ss_pred             HHHHHHHHh---cccchhccCCCCCC-CccccchhHHH----HHHHHHhccccce--eeeeeecchhHHHHHHHhccCCC
Confidence            356677754   233332 2233333 33333  5566    3558999999841  3477899999998889999876 


Q ss_pred             ---------------------------------------------------ccc---cccEEEEcCcc-ccc--ccChHH
Q psy10669        120 ---------------------------------------------------NNA---RFDFLSSGTTC-YSR--CLDYAR  142 (337)
Q Consensus       120 ---------------------------------------------------~~a---~pklII~~~S~-~~~--~~d~~~  142 (337)
                                                                         +.+   ++|+|-+--|- |+.  ...+++
T Consensus       108 Dell~i~G~PYDTLeevIG~rg~~~gSL~dfgi~Y~~v~Lt~~gkiD~~~v~~~i~~~tkli~IQRS~GY~~RpS~~I~e  187 (416)
T COG4100         108 DELLYITGSPYDTLEEVIGLRGEGQGSLKDFGIKYKAVPLTADGKIDIQAVKTAISDRTKLIGIQRSKGYAWRPSLSIAE  187 (416)
T ss_pred             CeEEEecCCcchhHHHHhccCCCCcccHHHhCcceeecccccCCcccHHHHHHhcCccceEEEEEeccCcCCCCcccHHH
Confidence                                                               001   26888775333 542  234444


Q ss_pred             HHH---Hhhhc--CCeEEEecccc------------ccccce-----eeeec-cCCchhhh--hHHHHHh-hccCCCCC-
Q psy10669        143 FRQ---ICDET--DSIMFADMSHI------------SGLIAG-----VKGVT-KTGEKILY--DYEEKIN-NAVFPSLQ-  195 (337)
Q Consensus       143 l~e---ia~~~--ga~l~vD~AH~------------~Gli~g-----~~~T~-~~Gg~i~~--~l~~~i~-~~~~p~~~-  195 (337)
                      |.+   +.++.  +.++.||-+-+            +-|++|     ..++. +.||+|.+  ++.+.-. +-.-|++. 
T Consensus       188 I~~~i~~vk~inpn~ivFVDNCYGEFvE~~EPt~vGaDliAGSLIKNpGGgiaktGGYiaGk~~~ve~~~yRlTaPGIG~  267 (416)
T COG4100         188 IEEMITFVKEINPNVIVFVDNCYGEFVEEKEPTHVGADLIAGSLIKNPGGGIAKTGGYIAGKAELVEAAAYRLTAPGIGR  267 (416)
T ss_pred             HHHHHHHHHhcCCCEEEEEeccchhhhhccCccccchhhhccceeeCCCCceeeccceeechHHHHHhhceeeecCCccc
Confidence            444   44554  78899998731            223332     01111 45788776  4544322 11246662 


Q ss_pred             -CCCcHHHHHHHHHHHHHHhchhh--HHHHHHHHHHHHHHHHHHHhCCCEEecC
Q psy10669        196 -GGPHNHAIGAIATAMLQAQSDEF--KSYQAQVKANASHLSDEMIKRGYHVVTG  246 (337)
Q Consensus       196 -g~~~~~~iaala~a~~e~~~~~~--~~y~~~v~~na~~l~~~L~~~G~~v~~~  246 (337)
                       +++....       +++|-+--|  +....|-++-+...+.-|.+.|+++-..
T Consensus       268 e~Gat~~~-------l~~myqGlFlAPhvv~qa~Kga~fta~~le~lg~~~~P~  314 (416)
T COG4100         268 EGGATLYS-------LREMYQGLFLAPHVVSQAVKGAHFTARFLEKLGFPVNPK  314 (416)
T ss_pred             cccccHHH-------HHHHHhhhccchHHHHHHhhhhHHHHHHHHHcCCCCCCc
Confidence             3322222       333322111  3456677777887888888899998763

>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]

Probab=95.57  E-value=0.87  Score=44.23  Aligned_cols=246  Identities=17%  Similarity=0.170  Sum_probs=129.1

Q ss_pred             eeeccCCCCCHHHHHHHhhhhhhccCCCC-CCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC--chhHH
Q psy10669         34 ELIASENFTSLAVLECLGSCLQNKYSEGL-PGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG--SPANF  110 (337)
Q Consensus        34 ~l~asen~~~p~V~~a~~~~l~~~y~~g~-~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg--t~AN~  110 (337)
                      |.-|--..++|+|++.....+.+--+.|. ...+.+++-... ++-..+++.+.++++.++. |  .|.|..|  |...-
T Consensus         8 nFsaGPa~lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~~~-~v~~~a~~~lreLl~iPd~-Y--~VlflqGGat~qf~   83 (365)
T COG1932           8 NFSAGPAALPPEVLQQAQKELLDWNGLGMSVMEISHRSKEFK-NVLEEAEKDLRELLNIPDD-Y--KVLFLQGGATGQFA   83 (365)
T ss_pred             CCCCCcccCCHHHHHHHHHHHhhhccCCcceeeeccccHHHH-HHHHHHHHHHHHHhCCCCC-c--eEEEEcCccHHHHH
Confidence            34444556799999988877665444342 233444443332 2333455788899999874 2  4666444  55655


Q ss_pred             HHHHhhCCc----------------ccc----c-ccEEEEc--CcccccccChHHHHHHhh-------------------
Q psy10669        111 AVCEKALPT----------------NNA----R-FDFLSSG--TTCYSRCLDYARFRQICD-------------------  148 (337)
Q Consensus       111 ~v~~aLl~~----------------~~a----~-pklII~~--~S~~~~~~d~~~l~eia~-------------------  148 (337)
                      ++...|+.+                +.+    + |+++...  .+.|+...|..... +.+                   
T Consensus        84 ~~p~nLl~~~~~~yv~~g~Ws~~a~~eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~-~~~~~ayv~~~~NeTi~Gv~v~  162 (365)
T COG1932          84 MAPMNLLGKRGTDYVDTGAWSEFAIKEAKKVGKQPKLIDARIEEAGYGSIPDLSKWD-FSDNDAYVHFCWNETISGVEVP  162 (365)
T ss_pred             HHHHhhhcccCceeEeeeehhHhHHHHHHHhcccccccccceeccCccCCCChhhcc-cCCCccEEEEecCCcccceEcc
Confidence            556666543                001    1 2322221  22344444443211 111                   


Q ss_pred             ---hc--CCeEEEeccccccccc--------eeeeec------cCC-ch-hhh-hHHHHHhhccCCCC------------
Q psy10669        149 ---ET--DSIMFADMSHISGLIA--------GVKGVT------KTG-EK-ILY-DYEEKINNAVFPSL------------  194 (337)
Q Consensus       149 ---~~--ga~l~vD~AH~~Gli~--------g~~~T~------~~G-g~-i~~-~l~~~i~~~~~p~~------------  194 (337)
                         ..  +.++++|++  ++.++        ++...+      +.| ++ |+. ++.+++++.-.|.+            
T Consensus       163 ~~p~~~~~~~~v~D~S--S~ilsr~iDvsk~dviyagaQKnlGpaGltvvIvr~~~l~r~~~~~~P~if~y~~~~~~~s~  240 (365)
T COG1932         163 ELPDIGSDGLLVADAS--SAILSRPIDVSKYDVIYAGAQKNLGPAGLTVVIVRPDLLERAESYTLPSIFDYLTHADNGSM  240 (365)
T ss_pred             CCCCCCCCceEEEecc--cHHhcCCCChhHcceEEEehhhccCccceEEEEEcHHHHhcccccCCchHhhchhhhccCCc
Confidence               11  177888887  44443        222222      223 11 223 45444433212322            


Q ss_pred             CCCCcHHHHHHHHHHHHHHhchhh-HHHHHHHHHHHHHHHHHHHhCCCEEec--CCCCCeE-EEEEecCCCcchHHHHHH
Q psy10669        195 QGGPHNHAIGAIATAMLQAQSDEF-KSYQAQVKANASHLSDEMIKRGYHVVT--GGTDVHL-ILIDLRKNKLTGSKVELV  270 (337)
Q Consensus       195 ~g~~~~~~iaala~a~~e~~~~~~-~~y~~~v~~na~~l~~~L~~~G~~v~~--~~t~~h~-v~V~~~~~~~~~~~~~~~  270 (337)
                      +-||.+-.+.-+...++++++..+ ++..++-.++++.|.+.+.+.+|-.-.  ..+-+.+ |+..+.+..++...+++.
T Consensus       241 yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s~fy~~~v~~~~RS~mnV~f~~~~~~ld~~fv~ea  320 (365)
T COG1932         241 YNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKSDFYRNLVAKANRSRMNVTFTLVDAELDKGFVAEA  320 (365)
T ss_pred             cCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCccccccchhhccceeEEEEcCcHHHHHHHHHHH
Confidence            345555555555667788876555 677888889999999999997664221  2222332 344455556555555444


Q ss_pred             HhhcCceeccCc----ccchh
Q psy10669        271 LEEIAIACNKNT----GISLA  287 (337)
Q Consensus       271 L~~~gI~v~~~~----girig  287 (337)
                      ..+ |...-+-.    |+|+.
T Consensus       321 e~~-gl~~lkGhr~vgGmRas  340 (365)
T COG1932         321 EAA-GLIYLKGHRSVGGLRAS  340 (365)
T ss_pred             HHc-CCceeccccCCCceeee
Confidence            444 54443323    88875

>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional

Probab=95.49  E-value=0.054  Score=54.72  Aligned_cols=95  Identities=8%  Similarity=0.091  Sum_probs=53.8

Q ss_pred             hHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeecc--CCch-----hhhhHHHHHhhccCCCCCCCCc
Q psy10669        140 YARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTK--TGEK-----ILYDYEEKINNAVFPSLQGGPH  199 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~--~Gg~-----i~~~l~~~i~~~~~p~~~g~~~  199 (337)
                      ++.++++|+++|++||+|+-++ .|=.+        |    +...+|  .||+     +..+..+.+.+....+++ +.|
T Consensus       248 l~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a~~~~gv~PDivt~gK~l~gG~Pi~av~~~~~~~~~~~~~~~~T~-~gn  326 (459)
T PRK06931        248 LQKIREVTQKHGILLIVDEVQAGFARTGKMFAFEHAGIEPDIIVMSKAVGGGLPLAVLGIKKEFDAWQPGGHTGTF-RGN  326 (459)
T ss_pred             HHHHHHHHHHcCCEEEEecchhcCCcCchHHHhhhcCCCCCEEEecccccCCcceeeeeeHHHHhhccCCCCCCCC-CCC
Confidence            4568899999999999999976 33233        1    112222  2342     222212333222222233 345


Q ss_pred             HHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh
Q psy10669        200 NHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK  238 (337)
Q Consensus       200 ~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~  238 (337)
                      +...|+..+.+..+.+   +...+++.+..++|.+.|++
T Consensus       327 pla~aaala~L~~l~~---~~l~~~~~~~G~~l~~~L~~  362 (459)
T PRK06931        327 QLAMATGLTTLKILKE---ENLAQNAAERGEWLKAQLAE  362 (459)
T ss_pred             HHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHH
Confidence            5565555555655533   24567788888888888876

>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue

Probab=94.64  E-value=0.1  Score=50.45  Aligned_cols=95  Identities=16%  Similarity=0.227  Sum_probs=52.7

Q ss_pred             hHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeecc--CCchhh-----h-hHHHHHhhccCCCCCCCC
Q psy10669        140 YARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTK--TGEKIL-----Y-DYEEKINNAVFPSLQGGP  198 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~--~Gg~i~-----~-~l~~~i~~~~~p~~~g~~  198 (337)
                      ++.|+++|+++|++||+|+-++ .|=.+        +    +...+|  .||+-+     . ++.+.+++.-...+++ .
T Consensus       200 l~~l~~lc~~~gillI~DEV~tG~gRtG~~~a~~~~gv~PDiv~~gK~l~gG~p~sav~~~~~i~~~~~~~~~~~T~~-g  278 (339)
T PF00202_consen  200 LRELRELCREHGILLIADEVQTGFGRTGKFFASEHYGVDPDIVTFGKGLGGGLPISAVLGSEEIMEAFQPGSHGSTFG-G  278 (339)
T ss_dssp             HHHHHHHHHHTT-EEEEEETTTTTTTTSSSSGHHHHTSSSSEEEEEGGGGTTSSEEEEEEEHHHHTTSCTTSSTCTTT-T
T ss_pred             hhehcccccccccceecccccccccccCCccceecccccCcccccccchhhhhhcccccccchhhccccccccccccc-c
Confidence            3578999999999999999987 33333        1    111222  245322     2 3444333322222222 3


Q ss_pred             cHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh
Q psy10669        199 HNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK  238 (337)
Q Consensus       199 ~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~  238 (337)
                      |+...++....+..+.+   .++.+++.+..++|.+.|++
T Consensus       279 ~p~~~aaa~~~l~~~~~---~~~~~~~~~~g~~l~~~L~~  315 (339)
T PF00202_consen  279 NPLSCAAALATLEILEE---EDLLERVRELGERLREGLRE  315 (339)
T ss_dssp             -HHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHH
T ss_pred             chHhhhhhhhHHHhhcc---HHHHHHHHHHHHHHHHHHHH
Confidence            44555555555555533   24667788888888888776

On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....

>KOG1402|consensus

Probab=94.30  E-value=0.36  Score=46.34  Aligned_cols=152  Identities=18%  Similarity=0.197  Sum_probs=77.5

Q ss_pred             cccccChHHHHHHhhhcCCeEEEeccccccccc-e-------------eeeecc--CCchh-----hh--hHHHHHhhcc
Q psy10669        134 YSRCLDYARFRQICDETDSIMFADMSHISGLIA-G-------------VKGVTK--TGEKI-----LY--DYEEKINNAV  190 (337)
Q Consensus       134 ~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-g-------------~~~T~~--~Gg~i-----~~--~l~~~i~~~~  190 (337)
                      .|-++=++..+|+|.+|+.++|+|+-|+ |+-- |             +.--+|  .||++     ++  |+.-.+++.-
T Consensus       224 vP~~GYL~~vreLCtkynvl~I~DEvQT-Gl~RTGk~la~d~env~PDivilgKalSGG~~Pvsavl~~~~im~~~~pge  302 (427)
T KOG1402|consen  224 VPPPGYLKKVRELCTKYNVLLIADEVQT-GLARTGKLLACDYENVRPDIVILGKALSGGVYPVSAVLADDDIMLNIKPGE  302 (427)
T ss_pred             eCCchhHHHHHHHHHhhcEEEEehhhhh-cccccCcEEEeehhhcCCCeEEEeccccCCeeeeEEEEecHHHHhccCCCc
Confidence            4667778899999999999999999985 2211 1             011112  47776     12  3433344433


Q ss_pred             CCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCE------Eec-CCCCCeEEEEEecCCCcc
Q psy10669        191 FPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYH------VVT-GGTDVHLILIDLRKNKLT  263 (337)
Q Consensus       191 ~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~------v~~-~~t~~h~v~V~~~~~~~~  263 (337)
                      ...++|+ |+-+.+.. +|.++.+.+  +...++-.+.-..|+.+|.+..-+      .+- .|--+-+++.....++.+
T Consensus       303 HgsTygg-NpLg~~va-iAalevi~e--ekL~era~~lG~~l~~~L~~l~~~~p~~v~~VRGrGl~~ai~i~~~~~~~~~  378 (427)
T KOG1402|consen  303 HGSTYGG-NPLGCAVA-IAALEVIVE--EKLVERAAKLGEILRDQLNKLQKKFPHVVKEVRGRGLLNAIVINPSKTSGQD  378 (427)
T ss_pred             cccccCC-ChHHHHHH-HHHHHHHHH--HHHHHHHHHHHHHHHHHHHhccccccchhheeeccceEEEEEeccccccchh
Confidence            2222322 33333333 333444331  234444444445555666653222      111 122233332222244456


Q ss_pred             hHHHHHHHhhcCceeccCc--ccchhhhh
Q psy10669        264 GSKVELVLEEIAIACNKNT--GISLAAEI  290 (337)
Q Consensus       264 ~~~~~~~L~~~gI~v~~~~--girig~~~  290 (337)
                      ...+.-+|.+.|....+-.  =||+.-|.
T Consensus       379 aw~~cl~lk~~g~LAkptH~~IiRfaPPL  407 (427)
T KOG1402|consen  379 AWDVCLALKENGLLAKPTHGNIIRFAPPL  407 (427)
T ss_pred             HHHHHHcccccccccCCCCCCeEEecCCc
Confidence            6666666667788776543  57776443

>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase

Probab=93.65  E-value=0.27  Score=53.20  Aligned_cols=149  Identities=16%  Similarity=0.124  Sum_probs=74.2

Q ss_pred             hHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeecc--CCchh------hh-hHHHHHhh-----ccCC
Q psy10669        140 YARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTK--TGEKI------LY-DYEEKINN-----AVFP  192 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~--~Gg~i------~~-~l~~~i~~-----~~~p  192 (337)
                      ++.++++|+++|++||+|+-++ .|=.|        |    +...+|  .||++      .. ++.+.+..     ..+.
T Consensus       608 l~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~gv~PDIi~~gKgLtgG~~Plaa~l~~~~I~~~f~~~~~~~~~~h  687 (817)
T PLN02974        608 QRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLGCKPDIACYAKLLTGGLVPLAATLATEEVFEAFRGPSKLDALLH  687 (817)
T ss_pred             HHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcCCCCCEEeecccccCCCCccEEEEEcHHHHHhhccccccCCccc
Confidence            4468899999999999999865 22222        1    111122  25543      33 45444421     2223


Q ss_pred             CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHH----HHHHHh--CCCEEecC-CCCCeEEEEEecCC----C
Q psy10669        193 SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHL----SDEMIK--RGYHVVTG-GTDVHLILIDLRKN----K  261 (337)
Q Consensus       193 ~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l----~~~L~~--~G~~v~~~-~t~~h~v~V~~~~~----~  261 (337)
                      +.+=+.|+.+.|+...++..+.++   +..+++.++++.+    .+.|.+  ..++.++. -...-+.-|.+...    +
T Consensus       688 g~Ty~gnpl~cAaala~L~~~~~~---~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~VRg~Gl~~~iel~~~~~~~~  764 (817)
T PLN02974        688 GHSYTAHPMGCAAAAKALQWYKDP---STNPNLIPPGSRLRELWDEELVRAISSLPNVERVVSLGTVLALELDAEGSGSG  764 (817)
T ss_pred             CCCCCcCHHHHHHHHHHHHHHHcc---cHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEeeeeEEEEEEecCCcccc
Confidence            333356777777777777776542   2334444444433    344421  11222220 01122444555322    1


Q ss_pred             c---chHHHHHHHh-hcCceeccCc-ccchhhhhH
Q psy10669        262 L---TGSKVELVLE-EIAIACNKNT-GISLAAEIQ  291 (337)
Q Consensus       262 ~---~~~~~~~~L~-~~gI~v~~~~-girig~~~~  291 (337)
                      +   .+..+.+.+. +.||.+++.. .|+|-.|..
T Consensus       765 ~~~~~a~~v~~~~~~~~Gl~~r~~Gnvi~l~pP~~  799 (817)
T PLN02974        765 YSSLYARSVVRRLRREDGIYARPLGNVVYLMCGPT  799 (817)
T ss_pred             cchHHHHHHHHHHHHhCCEEEEecCCEEEEeCCCC
Confidence            1   1234555666 7899997632 455544443

>KOG0259|consensus

Probab=92.08  E-value=9.8  Score=37.48  Aligned_cols=142  Identities=16%  Similarity=0.134  Sum_probs=82.2

Q ss_pred             eeecCCC-chhHHHHHHhhCCc--------------------------------------------ccc--cc-cEEEEc
Q psy10669         99 NVQPYSG-SPANFAVCEKALPT--------------------------------------------NNA--RF-DFLSSG  130 (337)
Q Consensus        99 ~v~~~Sg-t~AN~~v~~aLl~~--------------------------------------------~~a--~p-klII~~  130 (337)
                      +|..+|| ++|.-.++.+|.+|                                            .++  ++ .+||.+
T Consensus       128 DV~ltsGC~qAIe~~i~~LA~p~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~DENT~AivviN  207 (447)
T KOG0259|consen  128 DVVLTSGCSQAIELAISSLANPGANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALADENTVAIVVIN  207 (447)
T ss_pred             ceEEeccchHHHHHHHHHhcCCCCceecCCCCCchHHHhhhhcCceeEeecccCcccceechHHHHHhhccCeeEEEEeC
Confidence            4888888 89988888999654                                            111  24 466666


Q ss_pred             Ccc-cccccCh---HHHHHHhhhcCCeEEEeccccccccce----eee---------e-c---c-------CCchhhh-h
Q psy10669        131 TTC-YSRCLDY---ARFRQICDETDSIMFADMSHISGLIAG----VKG---------V-T---K-------TGEKILY-D  181 (337)
Q Consensus       131 ~S~-~~~~~d~---~~l~eia~~~ga~l~vD~AH~~Gli~g----~~~---------T-~---~-------~Gg~i~~-~  181 (337)
                      +++ .+-..+.   ++|.++|+++|.+++.|+==.==++++    .++         | +   |       +=|.|+. |
T Consensus       208 P~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPGWRlGWi~~hD  287 (447)
T KOG0259|consen  208 PNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGWRLGWIALHD  287 (447)
T ss_pred             CCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCceEeecccccccccCCceeeeEEEec
Confidence            655 3444444   466688899999999998522111220    000         0 0   1       0122221 1


Q ss_pred             ----HH-----HHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-CCCE
Q psy10669        182 ----YE-----EKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-RGYH  242 (337)
Q Consensus       182 ----l~-----~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~G~~  242 (337)
                          +.     +.+..  |-.+..+|..-..+|+=--+.+--+..|.....-+..|+..-.+.|++ +|++
T Consensus       288 ~~gvf~~~~~~q~~~~--~~~~~~~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~IP~l~  356 (447)
T KOG0259|consen  288 PRGVFRDTKVVQGIKN--FLDIIPGPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYSRLKDIPCLT  356 (447)
T ss_pred             ccccccchHHHHHHHH--HHhccCCccHhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHHHHhcCCCcc
Confidence                11     12221  123344566666666655555543444566677788899988999998 6776

>KOG3846|consensus

Probab=91.67  E-value=2.2  Score=40.81  Aligned_cols=150  Identities=14%  Similarity=0.120  Sum_probs=95.6

Q ss_pred             ccccChHHHHHHhhhcCCeEEEeccccccccc------eeee------------eccCCchhhh----------------
Q psy10669        135 SRCLDYARFRQICDETDSIMFADMSHISGLIA------GVKG------------VTKTGEKILY----------------  180 (337)
Q Consensus       135 ~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~------g~~~------------T~~~Gg~i~~----------------  180 (337)
                      +...|+.+|.+--+.-|+++=+|-||..|=+.      ||-|            .+--||+.+.                
T Consensus       228 GQ~Fdi~aIT~Agq~kgc~VGfDLAHAvgNVpL~LHdWgVDFACWCSYKYlnaGaGgIgGlFvHekh~~~~~prl~GWwg  307 (465)
T KOG3846|consen  228 GQYFDIGAITFAGQFKGCLVGFDLAHAVGNVPLQLHDWGVDFACWCSYKYLNAGAGGIGGLFVHEKHTKESLPRLAGWWG  307 (465)
T ss_pred             ccccchhhhhhcccCCCcEechhhhhhhcCCceEEeecCCceEEEeeecccccCCCccceeeeehhhhcchhhHHhhhcc
Confidence            57888888885556679999999999999888      3211            1112333321                


Q ss_pred             -hHHH--------HHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-CCCE--------
Q psy10669        181 -DYEE--------KINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-RGYH--------  242 (337)
Q Consensus       181 -~l~~--------~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~G~~--------  242 (337)
                       +...        .+.+....+.+++|..+.++|+..+++-..+...++.+++-+-.+.||-..++. .|++        
T Consensus       308 h~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~q~~~~~lRkrS~lLTgYleyL~k~~~g~~~~~rt~Kl  387 (465)
T KOG3846|consen  308 HDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFAQFNINELRKRSLLLTGYLEYLLKASKGYKHPLRTEKL  387 (465)
T ss_pred             CCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHHHHhhHHHHhhhhhhHHhHHHHHHHHhcccCchhhhcce
Confidence             1111        122333444589999999999999887766555677777777777776554443 3443        


Q ss_pred             ---EecC-CC--CCeEEEEEecCCCcchHHHHHHHhhcCceeccCc--ccchh
Q psy10669        243 ---VVTG-GT--DVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT--GISLA  287 (337)
Q Consensus       243 ---v~~~-~t--~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~--girig  287 (337)
                         +.+. .+  ..-+..+-+++.   ...+...|.+.|+.+.+-.  +||++
T Consensus       388 ~~~IiTP~~~~erGcQLsl~Fssp---~~~vfqeL~krGv~~DkR~PNvIRvA  437 (465)
T KOG3846|consen  388 FFTIITPTSTDERGCQLSLYFSSP---TPKVFQELHKRGVIGDKRRPNVIRVA  437 (465)
T ss_pred             eEEEeCCcccccccceEEEEeCCC---chHHHHHHHHcCeeccccCCCceEee
Confidence               3331 11  122555555543   3677888999999998755  88886

>KOG0256|consensus

Probab=91.30  E-value=6.8  Score=38.89  Aligned_cols=130  Identities=12%  Similarity=0.195  Sum_probs=79.4

Q ss_pred             cEEEEcCcc-cccccChHHHH---HHhhhcCCeEEEeccccccccce----------------------eeeeccC----
Q psy10669        125 DFLSSGTTC-YSRCLDYARFR---QICDETDSIMFADMSHISGLIAG----------------------VKGVTKT----  174 (337)
Q Consensus       125 klII~~~S~-~~~~~d~~~l~---eia~~~ga~l~vD~AH~~Gli~g----------------------~~~T~~~----  174 (337)
                      -+||+++|+ .+...+-+.|.   ..|.+.++-+++|+==..-+++.                      +-++-|.    
T Consensus       229 GvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~Glp  308 (471)
T KOG0256|consen  229 GVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLP  308 (471)
T ss_pred             EEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcccccCccCceEHHHHhhccccCCCcEEEEEEeccccCCC
Confidence            588888877 46777777666   45678899999999755545441                      1222221    


Q ss_pred             C---chhhh---hHHH---HHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEec
Q psy10669        175 G---EKILY---DYEE---KINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVT  245 (337)
Q Consensus       175 G---g~i~~---~l~~---~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~  245 (337)
                      |   |.|.+   ++..   ++..  | +..++.--+.++++..= .+..+....+-.+++...-+++.+.|++.||.-..
T Consensus       309 GfRvGviYS~ne~VvsaA~kmss--f-~~vSs~tQ~~la~LLSD-~~f~~~yl~en~~Rl~~rh~~~~~gLk~lgI~cl~  384 (471)
T KOG0256|consen  309 GFRVGVIYSNNEDVVSAATKMSS--F-GLVSSQTQYLLASLLSD-EEFTREYLRENNKRLRIRHRYIVEGLKALGIPCLK  384 (471)
T ss_pred             ceEEEEEEecChHHHHHHHHHhh--c-cCCcHHHHHHHHHHhch-HHHHHHHHHHHHHHHHHHHHHHHhhHHhcCCceee
Confidence            2   33333   2322   3322  2 22333333444444433 55543333677888999999999999999998875


Q ss_pred             CCCCCeEEEEEecC
Q psy10669        246 GGTDVHLILIDLRK  259 (337)
Q Consensus       246 ~~t~~h~v~V~~~~  259 (337)
                      . ...--++||++.
T Consensus       385 s-~AGlF~wvDlr~  397 (471)
T KOG0256|consen  385 S-NAGLFCWVDLRK  397 (471)
T ss_pred             c-CCeeEEEEEhHH
Confidence            2 445678899865

>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1

Probab=91.20  E-value=3.9  Score=40.98  Aligned_cols=38  Identities=8%  Similarity=0.184  Sum_probs=27.0

Q ss_pred             EEEEcCcccccccChHHHHHHhhhcCCeEEEeccccccc
Q psy10669        126 FLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGL  164 (337)
Q Consensus       126 lII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gl  164 (337)
                      ++|-.++.++..-|+++|.+++|++|+++++ .+--..|
T Consensus       201 v~vq~Pn~~G~~ed~~~i~~~~h~~gal~~~-~ad~~aL  238 (429)
T PF02347_consen  201 VMVQNPNTFGVFEDIKEIADIAHAAGALVIV-GADPNAL  238 (429)
T ss_dssp             EEEESS-TTSB--THHHHHHHHHHTT-EEEE-CGGCCGC
T ss_pred             EEeecCCCCceEeeHHHHHHHHHHcCCEEEE-ecCHHHH
Confidence            4555588889999999999999999999988 6665433

4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.

>KOG0633|consensus

Probab=90.66  E-value=5  Score=37.62  Aligned_cols=167  Identities=13%  Similarity=0.181  Sum_probs=92.0

Q ss_pred             cccEEEEcCcccc--cccChHHHHHHhhhc-CCeEEEecccc--ccccc-----------eeeeeccC--C------chh
Q psy10669        123 RFDFLSSGTTCYS--RCLDYARFRQICDET-DSIMFADMSHI--SGLIA-----------GVKGVTKT--G------EKI  178 (337)
Q Consensus       123 ~pklII~~~S~~~--~~~d~~~l~eia~~~-ga~l~vD~AH~--~Gli~-----------g~~~T~~~--G------g~i  178 (337)
                      ++|++.++.-..+  -.+-...|.+|-... +.+++||+|-+  +|+-.           .+.-|..|  |      |+-
T Consensus       160 ~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAYidFsg~~S~~~lV~kYpNLivlqTlSKsfGLAGiRvG~~  239 (375)
T KOG0633|consen  160 KIKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAYIDFSGVESRMKLVKKYPNLIVLQTLSKSFGLAGIRVGYG  239 (375)
T ss_pred             cceEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeeeEeeccccccchHhHhCCceeehhhhhhhcCcceeEeecc
Confidence            3888888733333  445555566665443 78999999953  45322           12223211  1      222


Q ss_pred             hh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-CCCEEecCCCCCeEEEE
Q psy10669        179 LY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-RGYHVVTGGTDVHLILI  255 (337)
Q Consensus       179 ~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~G~~v~~~~t~~h~v~V  255 (337)
                      ..  .+++.++.+=-|+-.|.+  ...+|+++ +..-.-...+.+++.+++.-.+|.+.|.+ .+.+-+.|+.+...+++
T Consensus       240 ~~~~~ia~iln~~KaPYNiS~~--~s~~AL~A-ls~~n~kkme~~rdaiv~er~RL~keLt~v~~~~~~~gg~daNFiLi  316 (375)
T KOG0633|consen  240 AFPLSIAEILNRAKAPYNISVA--GSVAALAA-LSDSNGKKMEDVRDAIVRERERLFKELTEVPFLNDYPGGSDANFILI  316 (375)
T ss_pred             cccHHHHHHHHhccCCccccch--hHHHHHHh-cCcccchHHHHHHHHHHHHHHHHHHHhhcCccccCCCCcccccEEEE
Confidence            22  577778876667544321  22333322 22111123457888888888888888888 34443346688888888


Q ss_pred             EecC--CCcchHHHHHHHhhcCceecc-Cc------ccch--hhhhHh
Q psy10669        256 DLRK--NKLTGSKVELVLEEIAIACNK-NT------GISL--AAEIQA  292 (337)
Q Consensus       256 ~~~~--~~~~~~~~~~~L~~~gI~v~~-~~------giri--g~~~~t  292 (337)
                      .+..  .+.+.......+.+.|+.|+- ++      .+||  ||++-+
T Consensus       317 ~v~~~~n~~akkly~q~at~~gVvVRfrgse~~c~G~lRitvGt~Een  364 (375)
T KOG0633|consen  317 EVTGGDNGMAKKLYKQDATKMGVVVRFRGSEEGCKGYLRITVGTPEEN  364 (375)
T ss_pred             EEcCCCcHHHHHHHHHHHHhcceEEEEcCCccccceeEEEEcCCcccc
Confidence            7753  232223333333357998873 22      5565  776654

>KOG0628|consensus

Probab=90.48  E-value=9  Score=38.56  Aligned_cols=160  Identities=13%  Similarity=0.092  Sum_probs=90.7

Q ss_pred             ccEEEEc-Ccccc-cccChHHHHHHhhhcCCeEEEeccccccccc----------ee-------------------eeec
Q psy10669        124 FDFLSSG-TTCYS-RCLDYARFRQICDETDSIMFADMSHISGLIA----------GV-------------------KGVT  172 (337)
Q Consensus       124 pklII~~-~S~~~-~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~----------g~-------------------~~T~  172 (337)
                      |=+++++ ++.-+ -.-++.+|..||+++|.+|.||+|= +|-..          |+                   +++.
T Consensus       236 Pf~v~at~GTT~~ca~D~l~elg~Vc~~~glWLHVDAAY-AGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~l  314 (511)
T KOG0628|consen  236 PFFVCATLGTTSSCAFDELEELGPVCREEGLWLHVDAAY-AGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPL  314 (511)
T ss_pred             cEEEEEeecCccccccccHHHhcchhhhcCEEEEeehhh-ccccccCHHHHHHhhcchhhccccCChhheeEEeeeeecc
Confidence            7666665 22222 4446888999999999999999994 44333          21                   1111


Q ss_pred             -cCCchhhh-----h---HHHHHhhccCCCC-CCCCcHHHHHHHHHHH--HHHhchhhHHHHHHHHHHHHHHHHHHHh-C
Q psy10669        173 -KTGEKILY-----D---YEEKINNAVFPSL-QGGPHNHAIGAIATAM--LQAQSDEFKSYQAQVKANASHLSDEMIK-R  239 (337)
Q Consensus       173 -~~Gg~i~~-----~---l~~~i~~~~~p~~-~g~~~~~~iaala~a~--~e~~~~~~~~y~~~v~~na~~l~~~L~~-~  239 (337)
                       .+-|.-+.     |   |...-....-++. -.=|....+=++-..+  +-+.-...++|..+-++.++.|-+.+.+ .
T Consensus       315 Wvkd~~~~~~~~~vdp~yL~h~~~~~~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~  394 (511)
T KOG0628|consen  315 WVKDGTKLSRAFNVDPLYLKHAYQGSAPDYRHWQIPLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADP  394 (511)
T ss_pred             eeecCceeeeeeecChHhhcchhhccCCCccccccccccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence             12221110     1   1111111111221 1234445555554443  2232356678888889999988887766 5


Q ss_pred             CCEEecCCCCCeEEEEEecCCCcchHHHHHHHhh----cCceeccCc-----ccchhh
Q psy10669        240 GYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEE----IAIACNKNT-----GISLAA  288 (337)
Q Consensus       240 G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~----~gI~v~~~~-----girig~  288 (337)
                      -|++.   +..|+.+|-++-++ +...-+++|.+    ..|...+..     -||+..
T Consensus       395 ~FE~~---~~~~lgLvcFRlk~-~N~~ne~Ll~~in~~g~i~l~~~~l~gk~vlRf~V  448 (511)
T KOG0628|consen  395 RFEIV---NKRILGLVCFRLKG-DNEINEALLNRLNSSGRIHLVPASLHGKFVLRFAV  448 (511)
T ss_pred             cceee---cccccceeEEeecC-CcHHHHHHHHHHHhcCcEEEEEeeecceEEEEEEe
Confidence            78887   58999999998877 44444555553    245544444     677643

>KOG1405|consensus

Probab=88.91  E-value=3  Score=40.67  Aligned_cols=140  Identities=14%  Similarity=0.188  Sum_probs=73.6

Q ss_pred             hHHHHHHhhhcCCeEEEeccccccccce----------------eeeecc--CCchhhh-hHHHHHhhccCCCCCCCCcH
Q psy10669        140 YARFRQICDETDSIMFADMSHISGLIAG----------------VKGVTK--TGEKILY-DYEEKINNAVFPSLQGGPHN  200 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~~Gli~g----------------~~~T~~--~Gg~i~~-~l~~~i~~~~~p~~~g~~~~  200 (337)
                      +..|++|++++|+.++||+-|+-|=--|                ++|..|  .|||... +++..--..+|-.-.|-|.-
T Consensus       294 f~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~PpD~vTFSKK~q~gGffh~~~frpn~pYrifNTWmGdP~k  373 (484)
T KOG1405|consen  294 FRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSPPDVVTFSKKFQTGGFFHDEEFRPNEPYRIFNTWMGDPSK  373 (484)
T ss_pred             HHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCCCccceehhhhhhcCccccCcccCCCchHHHhhhhcCChHH
Confidence            5679999999999999999997643221                233322  3786544 45332222344444555443


Q ss_pred             HHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC----CCEEec-CCCCCeEEEEEecCCCcchHHHHHHHhhcC
Q psy10669        201 HAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR----GYHVVT-GGTDVHLILIDLRKNKLTGSKVELVLEEIA  275 (337)
Q Consensus       201 ~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~----G~~v~~-~~t~~h~v~V~~~~~~~~~~~~~~~L~~~g  275 (337)
                      ..++.  ..+.++.+   +...+++..--++|.++|.+.    +-.+-. .| ....+.+|+.+.. --..+-..+.-.|
T Consensus       374 ~lll~--~vv~~I~~---~~Ll~n~~~vG~~l~~gL~~Lq~~~p~~~~~~RG-rGTF~a~d~ps~~-~Rdk~i~~~~~nG  446 (484)
T KOG1405|consen  374 NLLLE--EVVQEIKR---EDLLNNVAHVGKALLKGLLELQAKYPGKINNLRG-RGTFIAWDCPSGS-IRDKLILIARLNG  446 (484)
T ss_pred             HHHHH--HHHHHHhH---HHHHHHHHHHHHHHHHHHHHHHHhCchhhhcccc-cceEEEEeCCChH-HHHHHHHHHHHcC
Confidence            33332  22333322   345555555566666666652    111111 12 2335668876533 2223334444467


Q ss_pred             ceeccCc--ccch
Q psy10669        276 IACNKNT--GISL  286 (337)
Q Consensus       276 I~v~~~~--giri  286 (337)
                      +.+..+.  .||+
T Consensus       447 v~~GGCg~~siRf  459 (484)
T KOG1405|consen  447 VNLGGCGDKSIRF  459 (484)
T ss_pred             ceecccccceeee
Confidence            7776555  5665

>PLN02397 aspartate transaminase

Probab=88.61  E-value=12  Score=37.07  Aligned_cols=64  Identities=16%  Similarity=0.234  Sum_probs=42.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhCC----CEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCcccchhhh
Q psy10669        218 FKSYQAQVKANASHLSDEMIKRG----YHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNTGISLAAE  289 (337)
Q Consensus       218 ~~~y~~~v~~na~~l~~~L~~~G----~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~girig~~  289 (337)
                      .++.++++.++-+.+.+.|.+.|    +++.. ....--++++++     ...+.++|+++||.+.++.  ||...
T Consensus       334 ~~~~~~~~~~rr~~l~~~L~~~~~~~~~~~~~-p~gg~fl~~~l~-----~~~~~~Ll~~~~V~v~~~~--Ri~~~  401 (423)
T PLN02397        334 LKGMADRIISMRQKLYDALEARGSPGDWSHIT-KQIGMFSFTGLN-----KEQVDRMTKEYHIYMTRDG--RISMA  401 (423)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCCccc-CCceEEEecCCC-----HHHHHHHHHhCCEEECCCC--eEEEe
Confidence            34567788889999999999887    55432 123334555543     3466677788999997643  88653

>PTZ00376 aspartate aminotransferase; Provisional

Probab=86.51  E-value=11  Score=37.09  Aligned_cols=62  Identities=19%  Similarity=0.217  Sum_probs=36.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhCCCE----EecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCcccchhhh
Q psy10669        220 SYQAQVKANASHLSDEMIKRGYH----VVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNTGISLAAE  289 (337)
Q Consensus       220 ~y~~~v~~na~~l~~~L~~~G~~----v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~girig~~  289 (337)
                      +.++++.++-+.+.+.|.+.|+.    .... ...--+++.+     +...+..++++.||.+-+. | ||...
T Consensus       318 ~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~p-~gg~f~~~~~-----~~~~~~~L~~~~~v~v~p~-~-Ris~~  383 (404)
T PTZ00376        318 EMSGRIQNMRQLLYDELKALGSPGDWEHIIN-QIGMFSFTGL-----TKEQVERLIEKYHIYLLDN-G-RISVA  383 (404)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCccccccc-CceEEEecCC-----CHHHHHHHHHhCCEeecCC-C-eEEEe
Confidence            44567778888899999887532    2221 1122334443     2344555566679999875 2 77653

>PLN02368 alanine transaminase

Probab=86.13  E-value=3.8  Score=40.72  Aligned_cols=120  Identities=13%  Similarity=0.115  Sum_probs=66.0

Q ss_pred             cc-EEEEcCcc-cccccChHHHH---HHhhhcCCeEEEeccccc----c---ccc-----------------ee-eee--
Q psy10669        124 FD-FLSSGTTC-YSRCLDYARFR---QICDETDSIMFADMSHIS----G---LIA-----------------GV-KGV--  171 (337)
Q Consensus       124 pk-lII~~~S~-~~~~~d~~~l~---eia~~~ga~l~vD~AH~~----G---li~-----------------g~-~~T--  171 (337)
                      +| ++++++++ -+...+-+++.   ++|+++|++++.|+++.-    |   ...                 .+ ..+  
T Consensus       211 ~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfS  290 (407)
T PLN02368        211 VRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVS  290 (407)
T ss_pred             eEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCC
Confidence            45 55666655 34777777655   678899999999997632    2   100                 01 111  


Q ss_pred             -------ccCCchhh---h--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHh---------chhhHHHHHHHHHHHH
Q psy10669        172 -------TKTGEKIL---Y--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQ---------SDEFKSYQAQVKANAS  230 (337)
Q Consensus       172 -------~~~Gg~i~---~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~---------~~~~~~y~~~v~~na~  230 (337)
                             |-+-|+++   .  ++.+.+..... ... +++.....++..++..-.         ..+.+++.+...++.+
T Consensus       291 K~~~~~~GlRiGy~i~~~~~~~li~~~~~~~~-~~~-~~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~  368 (407)
T PLN02368        291 KGYWGECGQRGGYFEMTNIPPKTVEEIYKVAS-IAL-SPNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRAR  368 (407)
T ss_pred             cccccCCccceEEEEEeCCCHHHHHHHHHHhc-ccC-CCCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHH
Confidence                   11236654   2  45555554321 112 344455555555543110         0111345667788888


Q ss_pred             HHHHHHHhC-CCEEec
Q psy10669        231 HLSDEMIKR-GYHVVT  245 (337)
Q Consensus       231 ~l~~~L~~~-G~~v~~  245 (337)
                      .+.+.|.+. |+.+..
T Consensus       369 ~~~~~L~~~~g~~~~~  384 (407)
T PLN02368        369 MMTDGFNSCKNVVCNF  384 (407)
T ss_pred             HHHHHHhCCCCeEeCC
Confidence            899999984 877653

>PRK12566 glycine dehydrogenase; Provisional

Probab=85.79  E-value=13  Score=40.95  Aligned_cols=76  Identities=12%  Similarity=0.072  Sum_probs=46.5

Q ss_pred             HHHHHHHHHHHHh-chh-hHHHHHHHHHHHHHHHHHHHhCCCEEecC-CCCCeEEEEEecCCCcchHHHHHHHhhcCcee
Q psy10669        202 AIGAIATAMLQAQ-SDE-FKSYQAQVKANASHLSDEMIKRGYHVVTG-GTDVHLILIDLRKNKLTGSKVELVLEEIAIAC  278 (337)
Q Consensus       202 ~iaala~a~~e~~-~~~-~~~y~~~v~~na~~l~~~L~~~G~~v~~~-~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v  278 (337)
                      .+.|+.+++--.. -++ .++.++++..++.+|++.|.+.|+++... .-+  -+.|.++.   +..++..+-.+.||-+
T Consensus       336 aL~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~~g~~~~~~~fF~--~~~v~~~~---~~~~~~~~a~~~~~n~  410 (954)
T PRK12566        336 VLLANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEAKGIKRLNRHFFD--TLTLEVGG---AQAAIIESAEAARINL  410 (954)
T ss_pred             HHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCccc--eEEEEccC---CHHHHHHHHHHCCCee
Confidence            3444444443222 233 46888999999999999999999998753 122  23444421   2444545555568877


Q ss_pred             ccCc
Q psy10669        279 NKNT  282 (337)
Q Consensus       279 ~~~~  282 (337)
                      +...
T Consensus       411 r~~~  414 (954)
T PRK12566        411 RILG  414 (954)
T ss_pred             EEeC
Confidence            7543

>KOG1403|consensus

Probab=84.21  E-value=7.7  Score=37.09  Aligned_cols=75  Identities=20%  Similarity=0.135  Sum_probs=51.2

Q ss_pred             HHHhhcccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecC
Q psy10669         24 KEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPY  103 (337)
Q Consensus        24 ~e~~rq~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~  103 (337)
                      ++..|--.|||.++----.+|+|.+|...-+..    -+..+|+.     .++|.+-++...+.+=+.+     ++....
T Consensus        44 E~g~~yLDCInNVaHvghchp~VV~A~~kQmat----~~tN~RFl-----hd~lv~cA~~l~stlPeLs-----vc~F~N  109 (452)
T KOG1403|consen   44 EEGTRYLDCINNVAHVGHCHPEVVRAGAKQMAT----ISTNNRFL-----HDELVQCARTLTSTLPELS-----VCFFVN  109 (452)
T ss_pred             cCcccHHHHhhhhhhcccCCHHHHHHHHHHHhH----hcccchhh-----HHHHHHHHHHHhhcCCCce-----EEEEec
Confidence            333444467888887778899999988654432    23344543     4788877776777776655     577789


Q ss_pred             CCchhHHHH
Q psy10669        104 SGSPANFAV  112 (337)
Q Consensus       104 Sgt~AN~~v  112 (337)
                      ||+.||--.
T Consensus       110 SGSEANDLA  118 (452)
T KOG1403|consen  110 SGSEANDLA  118 (452)
T ss_pred             CCchhhHHH
Confidence            999999544

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	337
1ls3_B	483	Crystal Structure Of The Complex Between Rabbit Cyt		2e-77
1cj0_A	470	Crystal Structure Of Rabbit Cytosolic Serine Hydrox		3e-77
1rvu_A	483	E75q Mutant Of Rabbit Cytosolic Serine Hydroxymethy		7e-77
1rv3_A	483	E75l Mutant Of Rabbit Cytosolic Serine Hydroxymethy		2e-76
1kkj_A	419	Crystal Structure Of Serine Hydroxymethyltransferas		4e-55
2vmv_A	405	Crystal Structure Of F351gbsshmt Internal Aldimine		5e-55
2vi8_A	405	Crystal Structure Of S172absshmt Internal Aldimine		6e-55
2vgs_A	407	Crystal Structure Of E53qbsshmt Internal Aldimine L		1e-54
1yjs_A	419	K226q Mutant Of Serine Hydroxymethyltransferase Fro		1e-54
2w7d_A	405	Crystal Structure Of Y51fbsshmt Internal Aldimine L		1e-54
1yjy_A	419	K226m Mutant Of Serine Hydroxymethyltransferase Fro		2e-54
2vmn_A	405	Crystal Structure Of N341absshmt Internal Aldimine		3e-54
2w7i_A	405	Crystal Structure Of Y61absshmt Internal Aldimine L		5e-54
2vmr_A	405	Crystal Structure Of Y60absshmt Internal Aldimine L		5e-54
3ecd_A	425	Crystal Structure Of Serine Hydroxymethyltransferas		5e-52
2dkj_A	407	Crystal Structure Of T.Th.Hb8 Serine Hydroxymethylt		2e-50
3pgy_A	415	Serine Hydroxymethyltransferase From Staphylococcus		9e-50
1dfo_A	417	Crystal Structure At 2.4 Angstrom Resolution Of E.		1e-49
1eqb_A	417	X-Ray Crystal Structure At 2.7 Angstroms Resolution		3e-49
3g8m_A	417	Serine Hydroxymethyltransferase Y55f Mutant Length		3e-49
3gbx_A	420	Serine Hydroxymethyltransferase From Salmonella Typ		7e-48
3h7f_A	447	Crystal Structure Of Serine Hydroxymethyltransferas		2e-47
3n0l_A	417	Crystal Structure Of Serine Hydroxymethyltransferas		1e-46
3ou5_A	490	Human Mitochondrial Serine Hydroxymethyltransferase		1e-46
1eji_A	478	Recombinant Serine Hydroxymethyltransferase (Mouse)		4e-45
1bj4_A	470	Recombinant Serine Hydroxymethyltransferase (human)		3e-43

>pdb|1LS3|B Chain B, Crystal Structure Of The Complex Between Rabbit Cytosolic Serine Hydroxymethyltransferase And Triglu-5-Formyl-Tetrahydrofolate Length = 483

Iteration: 1
 Score =  285 bits (729), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 179/464 (38%), Positives = 235/464 (50%), Gaps = 132/464 (28%)
Query: 2   SSSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEG 61
           S   ML   L  +D E+Y +IKKE +RQ  G+ELIASENF S AVLE LGSCL NKYSEG
Sbjct: 16  SHEQMLAQPLKDSDAEVYDIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEG 75
Query: 62  LPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVC-------- 113
            PG+RYYGG + IDE+E + Q+R+L+A+ LDP+ WG NVQPYSGSPANFAV         
Sbjct: 76  YPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPYSGSPANFAVYTALVEPHG 135
Query: 114 --------------------EKALPTNNARFDFLS------SGTTCYSRCLDYAR----- 142
                               +K +   +  F+ ++      +G   Y R  + AR     
Sbjct: 136 RIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDTGYIDYDRLEENARLFHPK 195
Query: 143 -----------------FRQICDETDSIMFADMSHISGL-IAGV---------------- 168
                             R+I DE  + + ADM+HISGL +AGV                
Sbjct: 196 LIIAGTSCYSRNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFEHCHVVTTTTH 255
Query: 169 --------------KGV----TKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAM 210
                         +GV     KTG++ILY+ E  IN+AVFP LQGGPHNHAI  +A A+
Sbjct: 256 KTLRGCRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVAL 315
Query: 211 LQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELV 270
            QA + EFK YQ QV AN   LS  +++ GY +VTGG+D HLIL+DLR     G + E V
Sbjct: 316 KQAMTPEFKEYQRQVVANCRALSAALVELGYKIVTGGSDNHLILVDLRSKGTDGGRAEKV 375
Query: 271 LEEIAIACNKNT---------------------------------------GISLAAEIQ 291
           LE  +IACNKNT                                       GI L  +IQ
Sbjct: 376 LEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIELTVQIQ 435
Query: 292 AISGPK--LVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPG 333
             +GP+  L +F+  L  +E   + V AL++E+E ++  F +PG
Sbjct: 436 DDTGPRATLKEFKEKLAGDEKHQRAVRALRQEVESFAALFPLPG 479

>pdb|1CJ0|A Chain A, Crystal Structure Of Rabbit Cytosolic Serine Hydroxymethyltransferase At 2.8 Angstrom Resolution Length = 470

Iteration: 1
 Score =  285 bits (728), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 177/464 (38%), Positives = 233/464 (50%), Gaps = 132/464 (28%)
Query: 2   SSSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEG 61
           S   ML   L  +D E+Y +IKKE +RQ  G+ELIASENF S AVLE LGSCL NKYSEG
Sbjct: 3   SHEQMLAQPLKDSDAEVYDIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEG 62
Query: 62  LPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVC-------- 113
            PG+RYYGG + IDE+E + Q+R+L+A+ LDP+ WG NVQPYSGSPANFAV         
Sbjct: 63  YPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPYSGSPANFAVYTALVEPHG 122
Query: 114 --------------------EKALPTNNARFDFLS------SGTTCYSRCLDYAR----- 142
                               +K +   +  F+ ++      +G   Y R  + AR     
Sbjct: 123 RIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDTGYIDYDRLEENARLFHPK 182
Query: 143 -----------------FRQICDETDSIMFADMSHISGLIA------------------- 166
                             R+I DE  + + ADM+HISGL+                    
Sbjct: 183 LIIAGTSCYSRNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFEHCHVVTTTTH 242
Query: 167 ---------------GVKGV-TKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAM 210
                          GV+ V  KTG++ILY+ E  IN+AVFP LQGGPHNHAI  +A A+
Sbjct: 243 KTLRGCRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVAL 302
Query: 211 LQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELV 270
            QA + EFK YQ QV AN   LS  +++ GY +VTGG+D HLIL+DLR     G + E V
Sbjct: 303 KQAMTPEFKEYQRQVVANCRALSAALVELGYKIVTGGSDNHLILVDLRSKGTDGGRAEKV 362
Query: 271 LEEIAIACNKNT---------------------------------------GISLAAEIQ 291
           LE  +IACNKNT                                       GI L  +IQ
Sbjct: 363 LEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIELTVQIQ 422
Query: 292 AISGPK--LVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPG 333
             +GP+  L +F+  L  +E   + V AL++E+E ++  F +PG
Sbjct: 423 DDTGPRATLKEFKEKLAGDEKHQRAVRALRQEVESFAALFPLPG 466

>pdb|1RVU|A Chain A, E75q Mutant Of Rabbit Cytosolic Serine Hydroxymethyltransferase Length = 483

Iteration: 1
 Score =  283 bits (725), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 178/464 (38%), Positives = 235/464 (50%), Gaps = 132/464 (28%)
Query: 2   SSSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEG 61
           S   ML   L  +D E+Y +IKKE +RQ  G+ELIASENF S AVLE LGSCL NKYS+G
Sbjct: 16  SHEQMLAQPLKDSDAEVYDIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSQG 75
Query: 62  LPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVC-------- 113
            PG+RYYGG + IDE+E + Q+R+L+A+ LDP+ WG NVQPYSGSPANFAV         
Sbjct: 76  YPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPYSGSPANFAVYTALVEPHG 135
Query: 114 --------------------EKALPTNNARFDFLS------SGTTCYSRCLDYAR----- 142
                               +K +   +  F+ ++      +G   Y R  + AR     
Sbjct: 136 RIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDTGYIDYDRLEENARLFHPK 195
Query: 143 -----------------FRQICDETDSIMFADMSHISGL-IAGV---------------- 168
                             R+I DE  + + ADM+HISGL +AGV                
Sbjct: 196 LIIAGTSCYSRNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFEHCHVVTTTTH 255
Query: 169 --------------KGV----TKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAM 210
                         +GV     KTG++ILY+ E  IN+AVFP LQGGPHNHAI  +A A+
Sbjct: 256 KTLRGCRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVAL 315
Query: 211 LQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELV 270
            QA + EFK YQ QV AN   LS  +++ GY +VTGG+D HLIL+DLR     G + E V
Sbjct: 316 KQAMTPEFKEYQRQVVANCRALSAALVELGYKIVTGGSDNHLILVDLRSKGTDGGRAEKV 375
Query: 271 LEEIAIACNKNT---------------------------------------GISLAAEIQ 291
           LE  +IACNKNT                                       GI L  +IQ
Sbjct: 376 LEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIELTVQIQ 435
Query: 292 AISGPK--LVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPG 333
             +GP+  L +F+  L  +E   + V AL++E+E ++  F +PG
Sbjct: 436 DDTGPRATLKEFKEKLAGDEKHQRAVRALRQEVESFAALFPLPG 479

>pdb|1RV3|A Chain A, E75l Mutant Of Rabbit Cytosolic Serine Hydroxymethyltransferase, Complex With Glycine Length = 483

Iteration: 1
 Score =  282 bits (721), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 176/464 (37%), Positives = 232/464 (50%), Gaps = 132/464 (28%)
Query: 2   SSSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEG 61
           S   ML   L  +D E+Y +IKKE +RQ  G+ELIASENF S AVLE LGSCL NKYS G
Sbjct: 16  SHEQMLAQPLKDSDAEVYDIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSLG 75
Query: 62  LPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVC-------- 113
            PG+RYYGG + IDE+E + Q+R+L+A+ LDP+ WG NVQPYSGSPANFAV         
Sbjct: 76  YPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPYSGSPANFAVYTALVEPHG 135
Query: 114 --------------------EKALPTNNARFDFLS------SGTTCYSRCLDYAR----- 142
                               +K +   +  F+ ++      +G   Y R  + AR     
Sbjct: 136 RIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDTGYIDYDRLEENARLFHPK 195
Query: 143 -----------------FRQICDETDSIMFADMSHISGLIA------------------- 166
                             R+I DE  + + ADM+HISGL+                    
Sbjct: 196 LIIAGTSCYSRNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFEHCHVVTTTTH 255
Query: 167 ---------------GVKGV-TKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAM 210
                          GV+ V  KTG++ILY+ E  IN+AVFP LQGGPHNHAI  +A A+
Sbjct: 256 KTLRGCRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVAL 315
Query: 211 LQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELV 270
            QA + EFK YQ QV AN   LS  +++ GY +VTGG+D HLIL+DLR     G + E V
Sbjct: 316 KQAMTPEFKEYQRQVVANCRALSAALVELGYKIVTGGSDNHLILVDLRSKGTDGGRAEKV 375
Query: 271 LEEIAIACNKNT---------------------------------------GISLAAEIQ 291
           LE  +IACNKNT                                       GI L  +IQ
Sbjct: 376 LEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIELTVQIQ 435
Query: 292 AISGPK--LVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPG 333
             +GP+  L +F+  L  +E   + V AL++E+E ++  F +PG
Sbjct: 436 DDTGPRATLKEFKEKLAGDEKHQRAVRALRQEVESFAALFPLPG 479

>pdb|1KKJ|A Chain A, Crystal Structure Of Serine Hydroxymethyltransferase From B.Stearothermophilus Length = 419

Iteration: 1
 Score =  211 bits (538), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 123/343 (35%), Positives = 180/343 (52%), Gaps = 75/343 (21%)
Query: 11  LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG 70
           L Q DP++++ I++E+ RQ   IELIASENF S AV+E  GS L NKY+EG PG+RYYGG
Sbjct: 4   LPQQDPQVFAAIEQERKRQHAKIELIASENFVSRAVMEAQGSVLTNKYAEGYPGRRYYGG 63
Query: 71  NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL------------- 117
            +++D +E +A++R+ + F  +      NVQP+SG+ AN AV    L             
Sbjct: 64  CEYVDIVEELARERAKQLFGAE----HANVQPHSGAQANMAVYFTVLEHGDTVLGMNLSH 119
Query: 118 --------PTN--NARFDFLSSGT----------------------------TCYSRCLD 139
                   P N    +++F++ G                             + Y R +D
Sbjct: 120 GGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYDDVREKARLHRPKLIVAAASAYPRIID 179
Query: 140 YARFRQICDETDSIMFADMSHISGLIAG---------VKGVTKTGEKILY---------- 180
           +A+FR+I DE  + +  DM+HI+GL+A             VT T  K L           
Sbjct: 180 FAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPRGGMILCQ 239
Query: 181 -DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR 239
             + ++I+ A+FP +QGGP  H I A A A  +A  D+FK+Y  +V  NA  L+  +   
Sbjct: 240 EQFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNE 299
Query: 240 GYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
           G+ +V+GGTD HL+L+DLR  +LTG   E VL+E+ I  NKNT
Sbjct: 300 GFTLVSGGTDNHLLLVDLRPQQLTGKTAEKVLDEVGITVNKNT 342

>pdb|2VMV|A Chain A, Crystal Structure Of F351gbsshmt Internal Aldimine Length = 405

Iteration: 1
 Score =  211 bits (537), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 123/343 (35%), Positives = 180/343 (52%), Gaps = 75/343 (21%)
Query: 11  LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG 70
           L Q DP++++ I++E+ RQ   IELIASENF S AV+E  GS L NKY+EG PG+RYYGG
Sbjct: 4   LPQQDPQVFAAIEQERKRQHAKIELIASENFVSRAVMEAQGSVLTNKYAEGYPGRRYYGG 63
Query: 71  NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL------------- 117
            +++D +E +A++R+ + F  +      NVQP+SG+ AN AV    L             
Sbjct: 64  CEYVDIVEELARERAKQLFGAE----HANVQPHSGAQANMAVYFTVLEHGDTVLGMNLSH 119
Query: 118 --------PTN--NARFDFLSSGT----------------------------TCYSRCLD 139
                   P N    +++F++ G                             + Y R +D
Sbjct: 120 GGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYDDVREKARLHRPKLIVAAASAYPRIID 179
Query: 140 YARFRQICDETDSIMFADMSHISGLIAG---------VKGVTKTGEKILY---------- 180
           +A+FR+I DE  + +  DM+HI+GL+A             VT T  K L           
Sbjct: 180 FAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPRGGMILCQ 239
Query: 181 -DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR 239
             + ++I+ A+FP +QGGP  H I A A A  +A  D+FK+Y  +V  NA  L+  +   
Sbjct: 240 EQFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNE 299
Query: 240 GYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
           G+ +V+GGTD HL+L+DLR  +LTG   E VL+E+ I  NKNT
Sbjct: 300 GFTLVSGGTDNHLLLVDLRPQQLTGKTAEKVLDEVGITVNKNT 342

>pdb|2VI8|A Chain A, Crystal Structure Of S172absshmt Internal Aldimine Length = 405

Iteration: 1
 Score =  211 bits (536), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 123/343 (35%), Positives = 179/343 (52%), Gaps = 75/343 (21%)
Query: 11  LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG 70
           L Q DP++++ I++E+ RQ   IELIASENF S AV+E  GS L NKY+EG PG+RYYGG
Sbjct: 4   LPQQDPQVFAAIEQERKRQHAKIELIASENFVSRAVMEAQGSVLTNKYAEGYPGRRYYGG 63
Query: 71  NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL------------- 117
            +++D +E +A++R+ + F  +      NVQP+SG+ AN AV    L             
Sbjct: 64  CEYVDIVEELARERAKQLFGAE----HANVQPHSGAQANMAVYFTVLEHGDTVLGMNLSH 119
Query: 118 --------PTN--NARFDFLSSGT----------------------------TCYSRCLD 139
                   P N    +++F++ G                               Y R +D
Sbjct: 120 GGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYDDVREKARLHRPKLIVAAAAAYPRIID 179
Query: 140 YARFRQICDETDSIMFADMSHISGLIAG---------VKGVTKTGEKILY---------- 180
           +A+FR+I DE  + +  DM+HI+GL+A             VT T  K L           
Sbjct: 180 FAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPRGGMILCQ 239
Query: 181 -DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR 239
             + ++I+ A+FP +QGGP  H I A A A  +A  D+FK+Y  +V  NA  L+  +   
Sbjct: 240 EQFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNE 299
Query: 240 GYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
           G+ +V+GGTD HL+L+DLR  +LTG   E VL+E+ I  NKNT
Sbjct: 300 GFTLVSGGTDNHLLLVDLRPQQLTGKTAEKVLDEVGITVNKNT 342

>pdb|2VGS|A Chain A, Crystal Structure Of E53qbsshmt Internal Aldimine Length = 407

Iteration: 1
 Score =  210 bits (534), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 122/343 (35%), Positives = 180/343 (52%), Gaps = 75/343 (21%)
Query: 11  LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG 70
           L Q DP++++ I++E+ RQ   IELIASENF S AV+E  GS L NKY++G PG+RYYGG
Sbjct: 4   LPQQDPQVFAAIEQERKRQHAKIELIASENFVSRAVMEAQGSVLTNKYAQGYPGRRYYGG 63
Query: 71  NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL------------- 117
            +++D +E +A++R+ + F  +      NVQP+SG+ AN AV    L             
Sbjct: 64  CEYVDIVEELARERAKQLFGAE----HANVQPHSGAQANMAVYFTVLEHGDTVLGMNLSH 119
Query: 118 --------PTN--NARFDFLSSGT----------------------------TCYSRCLD 139
                   P N    +++F++ G                             + Y R +D
Sbjct: 120 GGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYDDVREKARLHRPKLIVAAASAYPRIID 179
Query: 140 YARFRQICDETDSIMFADMSHISGLIAG---------VKGVTKTGEKILY---------- 180
           +A+FR+I DE  + +  DM+HI+GL+A             VT T  K L           
Sbjct: 180 FAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPRGGMILCQ 239
Query: 181 -DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR 239
             + ++I+ A+FP +QGGP  H I A A A  +A  D+FK+Y  +V  NA  L+  +   
Sbjct: 240 EQFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNE 299
Query: 240 GYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
           G+ +V+GGTD HL+L+DLR  +LTG   E VL+E+ I  NKNT
Sbjct: 300 GFTLVSGGTDNHLLLVDLRPQQLTGKTAEKVLDEVGITVNKNT 342

>pdb|1YJS|A Chain A, K226q Mutant Of Serine Hydroxymethyltransferase From B. Stearothermophilus, Complex With Glycine Length = 419

Iteration: 1
 Score =  210 bits (534), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 122/343 (35%), Positives = 180/343 (52%), Gaps = 75/343 (21%)
Query: 11  LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG 70
           L Q DP++++ I++E+ RQ   IELIASENF S AV+E  GS L NKY+EG PG+RYYGG
Sbjct: 4   LPQQDPQVFAAIEQERKRQHAKIELIASENFVSRAVMEAQGSVLTNKYAEGYPGRRYYGG 63
Query: 71  NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL------------- 117
            +++D +E +A++R+ + F  +      NVQP+SG+ AN AV    L             
Sbjct: 64  CEYVDIVEELARERAKQLFGAE----HANVQPHSGAQANMAVYFTVLEHGDTVLGMNLSH 119
Query: 118 --------PTN--NARFDFLSSGT----------------------------TCYSRCLD 139
                   P N    +++F++ G                             + Y R +D
Sbjct: 120 GGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYDDVREKARLHRPKLIVAAASAYPRIID 179
Query: 140 YARFRQICDETDSIMFADMSHISGLIAG---------VKGVTKTGEKILY---------- 180
           +A+FR+I DE  + +  DM+HI+GL+A             VT T  + L           
Sbjct: 180 FAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHQTLRGPRGGMILCQ 239
Query: 181 -DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR 239
             + ++I+ A+FP +QGGP  H I A A A  +A  D+FK+Y  +V  NA  L+  +   
Sbjct: 240 EQFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNE 299
Query: 240 GYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
           G+ +V+GGTD HL+L+DLR  +LTG   E VL+E+ I  NKNT
Sbjct: 300 GFTLVSGGTDNHLLLVDLRPQQLTGKTAEKVLDEVGITVNKNT 342

>pdb|2W7D|A Chain A, Crystal Structure Of Y51fbsshmt Internal Aldimine Length = 405

Iteration: 1
 Score =  209 bits (533), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 122/343 (35%), Positives = 180/343 (52%), Gaps = 75/343 (21%)
Query: 11  LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG 70
           L Q DP++++ I++E+ RQ   IELIASENF S AV+E  GS L NK++EG PG+RYYGG
Sbjct: 4   LPQQDPQVFAAIEQERKRQHAKIELIASENFVSRAVMEAQGSVLTNKFAEGYPGRRYYGG 63
Query: 71  NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL------------- 117
            +++D +E +A++R+ + F  +      NVQP+SG+ AN AV    L             
Sbjct: 64  CEYVDIVEELARERAKQLFGAE----HANVQPHSGAQANMAVYFTVLEHGDTVLGMNLSH 119
Query: 118 --------PTN--NARFDFLSSGT----------------------------TCYSRCLD 139
                   P N    +++F++ G                             + Y R +D
Sbjct: 120 GGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYDDVREKARLHRPKLIVAAASAYPRIID 179
Query: 140 YARFRQICDETDSIMFADMSHISGLIAG---------VKGVTKTGEKILY---------- 180
           +A+FR+I DE  + +  DM+HI+GL+A             VT T  K L           
Sbjct: 180 FAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPRGGMILCQ 239
Query: 181 -DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR 239
             + ++I+ A+FP +QGGP  H I A A A  +A  D+FK+Y  +V  NA  L+  +   
Sbjct: 240 EQFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNE 299
Query: 240 GYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
           G+ +V+GGTD HL+L+DLR  +LTG   E VL+E+ I  NKNT
Sbjct: 300 GFTLVSGGTDNHLLLVDLRPQQLTGKTAEKVLDEVGITVNKNT 342

>pdb|1YJY|A Chain A, K226m Mutant Of Serine Hydroxymethyltransferase From B. Stearothermophilus, Complex With Serine Length = 419

Iteration: 1
 Score =  209 bits (532), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 122/343 (35%), Positives = 179/343 (52%), Gaps = 75/343 (21%)
Query: 11  LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG 70
           L Q DP++++ I++E+ RQ   IELIASENF S AV+E  GS L NKY+EG PG+RYYGG
Sbjct: 4   LPQQDPQVFAAIEQERKRQHAKIELIASENFVSRAVMEAQGSVLTNKYAEGYPGRRYYGG 63
Query: 71  NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL------------- 117
            +++D +E +A++R+ + F  +      NVQP+SG+ AN AV    L             
Sbjct: 64  CEYVDIVEELARERAKQLFGAE----HANVQPHSGAQANMAVYFTVLEHGDTVLGMNLSH 119
Query: 118 --------PTN--NARFDFLSSGT----------------------------TCYSRCLD 139
                   P N    +++F++ G                             + Y R +D
Sbjct: 120 GGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYDDVREKARLHRPKLIVAAASAYPRIID 179
Query: 140 YARFRQICDETDSIMFADMSHISGLIAG---------VKGVTKTGEKILY---------- 180
           +A+FR+I DE  + +  DM+HI+GL+A             VT T    L           
Sbjct: 180 FAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHMTLRGPRGGMILCQ 239
Query: 181 -DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR 239
             + ++I+ A+FP +QGGP  H I A A A  +A  D+FK+Y  +V  NA  L+  +   
Sbjct: 240 EQFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNE 299
Query: 240 GYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
           G+ +V+GGTD HL+L+DLR  +LTG   E VL+E+ I  NKNT
Sbjct: 300 GFTLVSGGTDNHLLLVDLRPQQLTGKTAEKVLDEVGITVNKNT 342

>pdb|2VMN|A Chain A, Crystal Structure Of N341absshmt Internal Aldimine Length = 405

Iteration: 1
 Score =  208 bits (530), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 122/343 (35%), Positives = 179/343 (52%), Gaps = 75/343 (21%)
Query: 11  LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG 70
           L Q DP++++ I++E+ RQ   IELIASENF S AV+E  GS L NKY+EG PG+RYYGG
Sbjct: 4   LPQQDPQVFAAIEQERKRQHAKIELIASENFVSRAVMEAQGSVLTNKYAEGYPGRRYYGG 63
Query: 71  NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL------------- 117
            +++D +E +A++R+ + F  +      NVQP+SG+ AN AV    L             
Sbjct: 64  CEYVDIVEELARERAKQLFGAE----HANVQPHSGAQANMAVYFTVLEHGDTVLGMNLSH 119
Query: 118 --------PTN--NARFDFLSSGT----------------------------TCYSRCLD 139
                   P N    +++F++ G                             + Y R +D
Sbjct: 120 GGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYDDVREKARLHRPKLIVAAASAYPRIID 179
Query: 140 YARFRQICDETDSIMFADMSHISGLIAG---------VKGVTKTGEKILY---------- 180
           +A+FR+I DE  + +  DM+HI+GL+A             VT T  K L           
Sbjct: 180 FAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPRGGMILCQ 239
Query: 181 -DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR 239
             + ++I+ A+FP +QGGP  H I A A A  +A  D+FK+Y  +V  NA  L+  +   
Sbjct: 240 EQFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNE 299
Query: 240 GYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
           G+ +V+GGTD HL+L+DLR  +LTG   E VL+E+ I  NK T
Sbjct: 300 GFTLVSGGTDNHLLLVDLRPQQLTGKTAEKVLDEVGITVNKAT 342

>pdb|2W7I|A Chain A, Crystal Structure Of Y61absshmt Internal Aldimine Length = 405

Iteration: 1
 Score =  207 bits (528), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 122/343 (35%), Positives = 179/343 (52%), Gaps = 75/343 (21%)
Query: 11  LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG 70
           L Q DP++++ I++E+ RQ   IELIASENF S AV+E  GS L NKY+EG PG+RY GG
Sbjct: 4   LPQQDPQVFAAIEQERKRQHAKIELIASENFVSRAVMEAQGSVLTNKYAEGYPGRRYAGG 63
Query: 71  NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL------------- 117
            +++D +E +A++R+ + F  +      NVQP+SG+ AN AV    L             
Sbjct: 64  CEYVDIVEELARERAKQLFGAE----HANVQPHSGAQANMAVYFTVLEHGDTVLGMNLSH 119
Query: 118 --------PTN--NARFDFLSSGT----------------------------TCYSRCLD 139
                   P N    +++F++ G                             + Y R +D
Sbjct: 120 GGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYDDVREKARLHRPKLIVAAASAYPRIID 179
Query: 140 YARFRQICDETDSIMFADMSHISGLIAG---------VKGVTKTGEKILY---------- 180
           +A+FR+I DE  + +  DM+HI+GL+A             VT T  K L           
Sbjct: 180 FAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPRGGMILCQ 239
Query: 181 -DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR 239
             + ++I+ A+FP +QGGP  H I A A A  +A  D+FK+Y  +V  NA  L+  +   
Sbjct: 240 EQFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNE 299
Query: 240 GYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
           G+ +V+GGTD HL+L+DLR  +LTG   E VL+E+ I  NKNT
Sbjct: 300 GFTLVSGGTDNHLLLVDLRPQQLTGKTAEKVLDEVGITVNKNT 342

>pdb|2VMR|A Chain A, Crystal Structure Of Y60absshmt Internal Aldimine Length = 405

Iteration: 1
 Score =  207 bits (528), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 122/343 (35%), Positives = 179/343 (52%), Gaps = 75/343 (21%)
Query: 11  LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG 70
           L Q DP++++ I++E+ RQ   IELIASENF S AV+E  GS L NKY+EG PG+R YGG
Sbjct: 4   LPQQDPQVFAAIEQERKRQHAKIELIASENFVSRAVMEAQGSVLTNKYAEGYPGRRAYGG 63
Query: 71  NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL------------- 117
            +++D +E +A++R+ + F  +      NVQP+SG+ AN AV    L             
Sbjct: 64  CEYVDIVEELARERAKQLFGAE----HANVQPHSGAQANMAVYFTVLEHGDTVLGMNLSH 119
Query: 118 --------PTN--NARFDFLSSGT----------------------------TCYSRCLD 139
                   P N    +++F++ G                             + Y R +D
Sbjct: 120 GGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYDDVREKARLHRPKLIVAAASAYPRIID 179
Query: 140 YARFRQICDETDSIMFADMSHISGLIAG---------VKGVTKTGEKILY---------- 180
           +A+FR+I DE  + +  DM+HI+GL+A             VT T  K L           
Sbjct: 180 FAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPRGGMILCQ 239
Query: 181 -DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR 239
             + ++I+ A+FP +QGGP  H I A A A  +A  D+FK+Y  +V  NA  L+  +   
Sbjct: 240 EQFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNE 299
Query: 240 GYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
           G+ +V+GGTD HL+L+DLR  +LTG   E VL+E+ I  NKNT
Sbjct: 300 GFTLVSGGTDNHLLLVDLRPQQLTGKTAEKVLDEVGITVNKNT 342

>pdb|3ECD|A Chain A, Crystal Structure Of Serine Hydroxymethyltransferase From Burkholderia Pseudomallei Length = 425

Iteration: 1
 Score =  201 bits (511), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 135/357 (37%), Positives = 177/357 (49%), Gaps = 77/357 (21%)
Query: 10  TLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYG 69
           +LA+ D  +   I KE  RQ + +ELIASEN  S AVL+  GS L NKY+EG PGKRYYG
Sbjct: 12  SLAERDASVRGAILKELERQQSQVELIASENIVSRAVLDAQGSVLTNKYAEGYPGKRYYG 71
Query: 70  GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV----------------- 112
           G +F DE+E +A +R  + FN        NVQP+SG+ AN AV                 
Sbjct: 72  GCEFADEVEALAIERVKRLFN----AGHANVQPHSGAQANGAVMLALAKPGDTVLGMSLD 127
Query: 113 -----CEKALPTNNARF-----------------------------DFLSSGTTCYSRCL 138
                   A P  + ++                               + +G + Y R L
Sbjct: 128 AGGHLTHGAKPALSGKWFNALQYGVSRDTMLIDYDQVEALAQQHKPSLIIAGFSAYPRKL 187
Query: 139 DYARFRQICDETDSIMFADMSHISGLIAGVKG---------VTKTGEK---------ILY 180
           D+ARFR I D   + +  DM+HI+G+IA  +          VT T  K         +L 
Sbjct: 188 DFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEHAHVVTSTTHKTLRGPRGGFVLT 247
Query: 181 DYEE---KINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMI 237
           + EE   KIN+AVFP LQGGP  H I   A A  +A +D+FK+Y  +V ANA  L D + 
Sbjct: 248 NDEEIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLK 307
Query: 238 KRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNTGISLAAEIQAIS 294
             G  +VTGGTD HL+L+DLR   L G++VE  LE   I CNKN GI    E   I+
Sbjct: 308 AGGVDLVTGGTDNHLLLVDLRPKGLKGAQVEQALERAGITCNKN-GIPFDPEKPTIT 363

>pdb|2DKJ|A Chain A, Crystal Structure Of T.Th.Hb8 Serine Hydroxymethyltransferase Length = 407

Iteration: 1
 Score =  196 bits (497), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/341 (35%), Positives = 162/341 (47%), Gaps = 76/341 (22%)
Query: 13  QTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQ 72
           + D  L+ LI  E+ RQ  G+ELIASENF S  V E +GS L NKY+EG PG RYYGG +
Sbjct: 6   KRDEALFELIALEEKRQREGLELIASENFVSKQVREAVGSVLTNKYAEGYPGARYYGGCE 65
Query: 73  FIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALP-------------- 118
            ID +E +A +R+   F      W  NVQP+SGS AN AV    +               
Sbjct: 66  VIDRVESLAIERAKALFG---AAW-ANVQPHSGSQANMAVYMALMEPGDTLMGMDLAAGG 121
Query: 119 --TNNARFDF-----------------------------------LSSGTTCYSRCLDYA 141
             T+ +R +F                                   + +G + Y R  D+ 
Sbjct: 122 HLTHGSRVNFSGKLYKVVSYGVRPDTELIDLEEVRRLALEHRPKVIVAGASAYPRFWDFK 181
Query: 142 RFRQICDETDSIMFADMSHISGLIAG---------VKGVTKTGEKILY------------ 180
            FR+I DE  + +  DM+H +GL+A             VT T  K L             
Sbjct: 182 AFREIADEVGAYLVVDMAHFAGLVAAGLHPNPLPYAHVVTSTTHKTLRGPRGGLILSNDP 241
Query: 181 DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG 240
           +  ++I+  +FP +QGGP  H I   A A  +A   EFK Y   V  NA  L++E+ +RG
Sbjct: 242 ELGKRIDKLIFPGIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELARRG 301
Query: 241 YHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKN 281
           Y +VTGGTD HL L+DLR   LTG + E  L+ + I  NKN
Sbjct: 302 YRIVTGGTDNHLFLVDLRPKGLTGKEAEERLDAVGITVNKN 342

>pdb|3PGY|A Chain A, Serine Hydroxymethyltransferase From Staphylococcus Aureus, S95p Mutant. Length = 415

Iteration: 1
 Score =  194 bits (492), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 119/344 (34%), Positives = 173/344 (50%), Gaps = 76/344 (22%)
Query: 11  LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG 70
           + + D  +   I++E  RQ + IELIASENF S AV+E  GS L NKY+EG PG+RYYGG
Sbjct: 7   ITKQDKVIAEAIEREFQRQNSNIELIASENFVSEAVMEAQGSVLTNKYAEGYPGRRYYGG 66
Query: 71  NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALP------------ 118
            +F+D  E +A  R+   F  +      NVQP+SG  AN AV   AL             
Sbjct: 67  CEFVDVTESIAIDRAKALFGAEH----VNVQPHSGPQANMAVYLVALEMGDTVLGMNLSH 122
Query: 119 ----TNNARFDF-----------------------------------LSSGTTCYSRCLD 139
               T+ A  +F                                   + +G + YSR +D
Sbjct: 123 GGHLTHGAPVNFSGKFYNFVEYGVDKDTERINYDEVRKLALEHKPKLIVAGASAYSRTID 182
Query: 140 YARFRQICDETDSIMFADMSHISGLIAG---------VKGVTKTGEKILY---------- 180
           + +F++I DE ++ +  DM+HI+GL+A             VT T  K L           
Sbjct: 183 FKKFKEIADEVNAKLMVDMAHIAGLVAAGLHPNPVEYADFVTTTTHKTLRGPRGGMILCK 242
Query: 181 -DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR 239
            +Y++ I+  +FP +QGGP  H I A A A  +A  + FK+YQ QV  NA  L++ +I  
Sbjct: 243 EEYKKDIDKTIFPGIQGGPLEHVIAAKAVAFGEALENNFKTYQQQVVKNAKVLAEALINE 302
Query: 240 GYHVVTGGTDVHLILIDLRKN-KLTGSKVELVLEEIAIACNKNT 282
           G+ +V+GGTD HL+ +D++ +  LTG + E  L+ + I CNKNT
Sbjct: 303 GFRIVSGGTDNHLVAVDVKGSIGLTGKEAEETLDSVGITCNKNT 346

>pdb|1DFO|A Chain A, Crystal Structure At 2.4 Angstrom Resolution Of E. Coli Serine Hydroxymethyltransferase In Complex With Glycine And 5-Formyl Tetrahydrofolate Length = 417

Iteration: 1
 Score =  193 bits (491), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 124/348 (35%), Positives = 172/348 (49%), Gaps = 83/348 (23%)
Query: 11  LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG 70
           +A  D EL+  +++EK RQ   IELIASEN+TS  V++  GS L NKY+EG PGKRYYGG
Sbjct: 8   IADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGG 67
Query: 71  NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL------------- 117
            +++D +E +A  R+ + F  D      NVQP+SGS ANFAV    L             
Sbjct: 68  CEYVDIVEQLAIDRAKELFGADY----ANVQPHSGSQANFAVYTALLEPGDTVLGMNLAH 123
Query: 118 --------PTN---------------NARFDF--------------LSSGTTCYSRCLDY 140
                   P N                   D+              +  G + YS  +D+
Sbjct: 124 GGHLTHGSPVNFSGKLYNIVPYGIDATGHIDYADLEKQAKEHKPKMIIGGFSAYSGVVDW 183
Query: 141 ARFRQICDETDSIMFADMSHISGLIA-----------------------GVKG---VTKT 174
           A+ R+I D   + +F DM+H++GL+A                       G +G   + K 
Sbjct: 184 AKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLILAKG 243
Query: 175 GEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSD 234
           G + LY   +K+N+AVFP  QGGP  H I   A A+ +A   EFK+YQ QV  NA  + +
Sbjct: 244 GSEELY---KKLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKTYQQQVAKNAKAMVE 300
Query: 235 EMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
             ++RGY VV+GGTD HL L+DL    LTG + +  L    I  NKN+
Sbjct: 301 VFLERGYKVVSGGTDNHLFLVDLVDKNLTGKEADAALGRANITVNKNS 348

>pdb|1EQB|A Chain A, X-Ray Crystal Structure At 2.7 Angstroms Resolution Of Ternary Complex Between The Y65f Mutant Of E-Coli Serine Hydroxymethyltransferase, Glycine And 5-Formyl Tetrahydrofolate Length = 417

Iteration: 1
 Score =  192 bits (487), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 123/348 (35%), Positives = 172/348 (49%), Gaps = 83/348 (23%)
Query: 11  LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG 70
           +A  D EL+  +++EK RQ   IELIASEN+TS  V++  GS L NKY+EG PGKRY+GG
Sbjct: 8   IADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYFGG 67
Query: 71  NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL------------- 117
            +++D +E +A  R+ + F  D      NVQP+SGS ANFAV    L             
Sbjct: 68  CEYVDIVEQLAIDRAKELFGADY----ANVQPHSGSQANFAVYTALLEPGDTVLGMNLAH 123
Query: 118 --------PTN---------------NARFDF--------------LSSGTTCYSRCLDY 140
                   P N                   D+              +  G + YS  +D+
Sbjct: 124 GGHLTHGSPVNFSGKLYNIVPYGIDATGHIDYADLEKQAKEHKPKMIIGGFSAYSGVVDW 183
Query: 141 ARFRQICDETDSIMFADMSHISGLIA-----------------------GVKG---VTKT 174
           A+ R+I D   + +F DM+H++GL+A                       G +G   + K 
Sbjct: 184 AKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLILAKG 243
Query: 175 GEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSD 234
           G + LY   +K+N+AVFP  QGGP  H I   A A+ +A   EFK+YQ QV  NA  + +
Sbjct: 244 GSEELY---KKLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKTYQQQVAKNAKAMVE 300
Query: 235 EMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
             ++RGY VV+GGTD HL L+DL    LTG + +  L    I  NKN+
Sbjct: 301 VFLERGYKVVSGGTDNHLFLVDLVDKNLTGKEADAALGRANITVNKNS 348

>pdb|3G8M|A Chain A, Serine Hydroxymethyltransferase Y55f Mutant Length = 417

Iteration: 1
 Score =  192 bits (487), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 123/348 (35%), Positives = 172/348 (49%), Gaps = 83/348 (23%)
Query: 11  LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG 70
           +A  D EL+  +++EK RQ   IELIASEN+TS  V++  GS L NK++EG PGKRYYGG
Sbjct: 8   IADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKFAEGYPGKRYYGG 67
Query: 71  NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL------------- 117
            +++D +E +A  R+ + F  D      NVQP+SGS ANFAV    L             
Sbjct: 68  CEYVDIVEQLAIDRAKELFGADY----ANVQPHSGSQANFAVYTALLEPGDTVLGMNLAH 123
Query: 118 --------PTN---------------NARFDF--------------LSSGTTCYSRCLDY 140
                   P N                   D+              +  G + YS  +D+
Sbjct: 124 GGHLTHGSPVNFSGKLYNIVPYGIDATGHIDYADLEKQAKEHKPKMIIGGFSAYSGVVDW 183
Query: 141 ARFRQICDETDSIMFADMSHISGLIA-----------------------GVKG---VTKT 174
           A+ R+I D   + +F DM+H++GL+A                       G +G   + K 
Sbjct: 184 AKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLILAKG 243
Query: 175 GEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSD 234
           G + LY   +K+N+AVFP  QGGP  H I   A A+ +A   EFK+YQ QV  NA  + +
Sbjct: 244 GSEELY---KKLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKTYQQQVAKNAKAMVE 300
Query: 235 EMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
             ++RGY VV+GGTD HL L+DL    LTG + +  L    I  NKN+
Sbjct: 301 VFLERGYKVVSGGTDNHLFLVDLVDKNLTGKEADAALGRANITVNKNS 348

>pdb|3GBX|A Chain A, Serine Hydroxymethyltransferase From Salmonella Typhimurium Length = 420

Iteration: 1
 Score =  187 bits (475), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 124/349 (35%), Positives = 170/349 (48%), Gaps = 83/349 (23%)
Query: 10  TLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYG 69
            +A  D EL+   ++EK RQ   IELIASEN+TS  V +  GS L NKY+EG PGKRYYG
Sbjct: 10  NIADYDAELWQAXEQEKVRQEEHIELIASENYTSPRVXQAQGSQLTNKYAEGYPGKRYYG 69
Query: 70  GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL------------ 117
           G +++D +E +A  R+ + F  D      NVQP+SGS ANFAV    L            
Sbjct: 70  GCEYVDVVEQLAIDRAKELFGADY----ANVQPHSGSQANFAVYTALLQPGDTVLGXNLA 125
Query: 118 ---------PTN---------------NARFDF--------------LSSGTTCYSRCLD 139
                    P N               + + D+              +  G + YS  +D
Sbjct: 126 QGGHLTHGSPVNFSGKLYNIVPYGIDESGKIDYDEXAKLAKEHKPKXIIGGFSAYSGVVD 185
Query: 140 YARFRQICDETDSIMFADMSHISGLIA-----------------------GVKG---VTK 173
           +A+ R+I D   + +F D +H++GLIA                       G +G   + K
Sbjct: 186 WAKXREIADSIGAYLFVDXAHVAGLIAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLILAK 245
Query: 174 TGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLS 233
            G++ LY   +K+N+AVFPS QGGP  H I   A A+ +A   EFK YQ QV  NA    
Sbjct: 246 GGDEELY---KKLNSAVFPSAQGGPLXHVIAGKAVALKEAXEPEFKVYQQQVAKNAKAXV 302
Query: 234 DEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
           +  + RGY VV+GGT+ HL L+DL    LTG + +  L    I  NKN+
Sbjct: 303 EVFLNRGYKVVSGGTENHLFLLDLVDKNLTGKEADAALGRANITVNKNS 351

>pdb|3H7F|A Chain A, Crystal Structure Of Serine Hydroxymethyltransferase From Mycobacterium Tuberculosis Length = 447

Iteration: 1
 Score =  186 bits (471), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 117/347 (33%), Positives = 165/347 (47%), Gaps = 80/347 (23%)
Query: 11  LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG 70
           LA+ DP++  L+ KE  RQ + +E+IASENF   AVL+  GS L NKY+EGLPG+RYYGG
Sbjct: 26  LAEVDPDIAELLAKELGRQRDTLEMIASENFVPRAVLQAQGSVLTNKYAEGLPGRRYYGG 85
Query: 71  NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALP------------ 118
            + +D +E +A+ R+   F  +      NVQP+SG+ AN AV    +             
Sbjct: 86  CEHVDVVENLARDRAKALFGAE----FANVQPHSGAQANAAVLHALMSPGERLLGLDLAN 141
Query: 119 ----TNNARFDF-----------------------------------LSSGTTCYSRCLD 139
               T+  R +F                                   + +G + Y R LD
Sbjct: 142 GGHLTHGMRLNFSGKLYENGFYGVDPATHLIDMDAVRATALEFRPKVIIAGWSAYPRVLD 201
Query: 140 YARFRQICDETDSIMFADMSHISGLIAG----------------VKGVTKTGEKILY--- 180
           +A FR I DE  + +  DM+H +GL+A                 V      G   L    
Sbjct: 202 FAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPVPHADVVSTTVHXTLGGGRSGLIVGK 261
Query: 181 -DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMI-- 237
             Y + IN+AVFP  QGGP  H I   A A+  A + EF   Q +  + A  ++D ++  
Sbjct: 262 QQYAKAINSAVFPGQQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAP 321
Query: 238 ---KRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKN 281
              K G  VV+GGTDVHL+L+DLR + L G   E +L E+ I  N+N
Sbjct: 322 DVAKAGVSVVSGGTDVHLVLVDLRDSPLDGQAAEDLLHEVGITVNRN 368

>pdb|3N0L|A Chain A, Crystal Structure Of Serine Hydroxymethyltransferase From Campylobacter Jejuni Length = 417

Iteration: 1
 Score =  183 bits (465), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 120/344 (34%), Positives = 164/344 (47%), Gaps = 75/344 (21%)
Query: 10  TLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYG 69
           +L   D E++ L  KE  RQ  G+E IASENFT   V E  GS L NKY+EG PGKRYYG
Sbjct: 5   SLEXFDKEIFDLTNKELERQCEGLEXIASENFTLPEVXEVXGSILTNKYAEGYPGKRYYG 64
Query: 70  GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV-------CEKALPTN-- 120
           G +F+DEIE +A +R  K FN        NVQP SGS AN  V        +K L  +  
Sbjct: 65  GCEFVDEIETLAIERCKKLFNCK----FANVQPNSGSQANQGVYAALINPGDKILGXDLS 120
Query: 121 ---------------------------NARFDF--------------LSSGTTCYSRCLD 139
                                      + R D+              +  G + Y+R +D
Sbjct: 121 HGGHLTHGAKVSSSGKXYESCFYGVELDGRIDYEKVREIAKKEKPKLIVCGASAYARVID 180
Query: 140 YARFRQICDETDSIMFADMSHISGLIAG---------VKGVTKTGEKILY---------- 180
           +A+FR+I DE  + +FAD++HI+GL+              V+ T  K L           
Sbjct: 181 FAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFPYAHVVSSTTHKTLRGPRGGIIXTN 240
Query: 181 --DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK 238
             +  +KIN+A+FP +QGGP  H I A A       SDE+K Y  QV+ NA  L++ +  
Sbjct: 241 DEELAKKINSAIFPGIQGGPLXHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLXD 300
Query: 239 RGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
           R + +V+ GTD HL+L      + +G   +L L    I  NKNT
Sbjct: 301 RKFKLVSDGTDNHLVLXSFLDREFSGKDADLALGNAGITANKNT 344

>pdb|3OU5|A Chain A, Human Mitochondrial Serine Hydroxymethyltransferase 2 Length = 490

Iteration: 1
 Score =  183 bits (465), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 103/292 (35%), Positives = 154/292 (52%), Gaps = 75/292 (25%)
Query: 116 ALPTNNARFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA--------- 166
           AL     R   + +GT+ Y+R +DYAR R++CDE  + + ADM+HISGL+A         
Sbjct: 196 ALTARLFRPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFK 255
Query: 167 -------------------------GVKGV-TKTGEKILYDYEEKINNAVFPSLQGGPHN 200
                                    GVK V  KTG +I Y +E++IN AVFPSLQGGPHN
Sbjct: 256 HADIVTTTTHKTLRGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHN 315
Query: 201 HAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKN 260
           HAI A+A A+ QA +  F+ Y  QV  NA  ++D +++RGY +V+GGTD HL+L+DLR  
Sbjct: 316 HAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLERGYSLVSGGTDNHLVLVDLRPK 375
Query: 261 KLTGSKVELVLEEIAIACNKNT-------------------------------------- 282
            L G++ E VLE ++I  NKNT                                      
Sbjct: 376 GLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFID 435
Query: 283 -GISLAAEIQAISGPKLVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPG 333
            G+++  E+++ +  KL DF++ L K+ +  +++A L++ +E ++  F MPG
Sbjct: 436 EGVNIGLEVKSKTA-KLQDFKSFLLKDSETSQRLANLRQRVEQFARAFPMPG 486

>pdb|1EJI|A Chain A, Recombinant Serine Hydroxymethyltransferase (Mouse) Length = 478

Iteration: 1
 Score =  178 bits (452), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 114/314 (36%), Positives = 152/314 (48%), Gaps = 78/314 (24%)
Query: 102 PYSGSPANFAVCEKALPTNNARF--DFLSSGTTCYSRCLDYARFRQICDETDSIMFADMS 159
           PY   P    +    L  N + F    + +GT+CYSR LDYAR R+I D+  + + AD +
Sbjct: 165 PYKVYPETGYINYDQLEENASLFHPKLIIAGTSCYSRNLDYARLRKIADDNGAYLXADXA 224
Query: 160 HISGLIA----------------------------------GVKGV-TKTGEKILYDYEE 184
           HISGL+A                                  GV+ V  KTG++  Y+ E 
Sbjct: 225 HISGLVAAGVVPSPFEHCHVVTTTTHKTLRGCRAGXIFYRKGVRSVDPKTGKETYYELES 284
Query: 185 KINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVV 244
            IN+AVFP LQGGPHNHAI  +A A+ QA + EFK YQ QV AN   LSD + + GY +V
Sbjct: 285 LINSAVFPGLQGGPHNHAIAGVAVALKQAXTTEFKIYQLQVLANCRALSDALTELGYKIV 344
Query: 245 TGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT---------------------- 282
           TGG+D HLIL DLR     G + E VLE  +IACNKNT                      
Sbjct: 345 TGGSDNHLILXDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTS 404
Query: 283 -----------------GISLAAEIQAISGPK--LVDFQTCLHKNEDIVKKVAALKKEIE 323
                            GI L  +IQ+    K  L +F+  L  +E I   VA L++E+E
Sbjct: 405 RGLLEEDFQKVAHFIHRGIELTLQIQSHXATKATLKEFKEKLAGDEKIQSAVATLREEVE 464
Query: 324 DYSNQFEMPGQADL 337
           ++++ F +PG  D 
Sbjct: 465 NFASNFSLPGLPDF 478

>pdb|1BJ4|A Chain A, Recombinant Serine Hydroxymethyltransferase (human) Length = 470

Iteration: 1
 Score =  172 bits (436), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 113/310 (36%), Positives = 152/310 (49%), Gaps = 79/310 (25%)
Query: 102 PYSGSPANFAVCEKALPTNNARF--DFLSSGTTCYSRCLDYARFRQICDETDSIMFADMS 159
           PY  +P    +    L  N   F    + +GT+CYSR L+YAR R+I DE  + + ADM+
Sbjct: 161 PYKVNPDTGYINYDQLEENARLFHPKLIIAGTSCYSRNLEYARLRKIADENGAYLMADMA 220
Query: 160 HISGLIA----------------------------------GVKGV-TKTGEKILYDYEE 184
           HISGL+A                                  GVK V   TG++ILY+ E 
Sbjct: 221 HISGLVAAGVVPSPFEHCHVVTTTTHKTLRGCRAGMIFYRKGVKSVDPATGKEILYNLES 280
Query: 185 KINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVV 244
            IN+AVFP LQGGPHNHAI  +A A+ QA + EFK YQ QV AN   LS+ + + GY +V
Sbjct: 281 LINSAVFPGLQGGPHNHAIAGVAVALKQAMTLEFKVYQHQVVANCRALSEALTELGYKIV 340
Query: 245 TGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT---------------------- 282
           TGG+D HLIL+DLR     G + E VLE  +IACNKNT                      
Sbjct: 341 TGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDRSALRPSGLRLGTPALTS 400
Query: 283 -----------------GISLAAEIQAISG--PKLVDFQTCLHKNEDIVKKVAALKKEIE 323
                            GI L  +IQ+ +G    L +F+  L   +     V AL++E+E
Sbjct: 401 RGLLEKDFQKVAHFIHRGIELTLQIQSDTGVAATLKEFKERL-AGDKYQAAVQALREEVE 459
Query: 324 DYSNQFEMPG 333
            +++ F +PG
Sbjct: 460 SFASLFPLPG 469

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	337
2dkj_A	407	Serine hydroxymethyltransferase; PLP dependent enz	3e-99
2vi8_A	405	Serine hydroxymethyltransferase; SHMT, E53Q, FTHF,	5e-99
3n0l_A	417	Serine hydroxymethyltransferase; alpha beta class,	5e-98
3ecd_A	425	Serine hydroxymethyltransferase 2; ssgcid, decode,	7e-98
3gbx_A	420	Serine hydroxymethyltransferase; structural genomi	8e-98
3h7f_A	447	Serine hydroxymethyltransferase 1; cytoplasm, one-	2e-95
1rv3_A	483	Serine hydroxymethyltransferase, cytosolic; one-ca	2e-80
1rv3_A	483	Serine hydroxymethyltransferase, cytosolic; one-ca	1e-66
2a7v_A	490	Serine hydroxymethyltransferase; structural genomi	5e-79
2a7v_A	490	Serine hydroxymethyltransferase; structural genomi	4e-65
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-05

>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus} Length = 407

 Score =  297 bits (764), Expect = 3e-99
 Identities = 118/350 (33%), Positives = 160/350 (45%), Gaps = 86/350 (24%)

Query: 10  TLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYG 69
           +  + D  L+ LI  E+ RQ  G+ELIASENF S  V E +GS L NKY+EG PG RYYG
Sbjct: 3   STLKRDEALFELIALEEKRQREGLELIASENFVSKQVREAVGSVLTNKYAEGYPGARYYG 62

Query: 70  GNQFIDEIEIVAQQRSLKAFNLDPEQWGC---NVQPYSG--------------------- 105
           G + ID +E +A +R+   F       G    NVQP+SG                     
Sbjct: 63  GCEVIDRVESLAIERAKALF-------GAAWANVQPHSGSQANMAVYMALMEPGDTLMGM 115

Query: 106 -----------SPANFA-----VCEKALPTNNARFDF--------------LSSGTTCYS 135
                      S  NF+     V    +  +    D               + +G + Y 
Sbjct: 116 DLAAGGHLTHGSRVNFSGKLYKVVSYGVRPDTELIDLEEVRRLALEHRPKVIVAGASAYP 175

Query: 136 RCLDYARFRQICDETDSIMFADMSHISGLIAGVKG-----------VTKTGEKIL----- 179
           R  D+  FR+I DE  + +  DM+H +GL+A   G           VT T  K L     
Sbjct: 176 RFWDFKAFREIADEVGAYLVVDMAHFAGLVAA--GLHPNPLPYAHVVTSTTHKTLRGPRG 233

Query: 180 -------YDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHL 232
                   +  ++I+  +FP +QGGP  H I   A A  +A   EFK Y   V  NA  L
Sbjct: 234 GLILSNDPELGKRIDKLIFPGIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRL 293

Query: 233 SDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
           ++E+ +RGY +VTGGTD HL L+DLR   LTG + E  L+ + I  NKN 
Sbjct: 294 AEELARRGYRIVTGGTDNHLFLVDLRPKGLTGKEAEERLDAVGITVNKNA 343

>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ... Length = 405

 Score =  297 bits (762), Expect = 5e-99
 Identities = 121/349 (34%), Positives = 175/349 (50%), Gaps = 85/349 (24%)

Query: 10  TLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYG 69
            L Q DP++++ I++E+ RQ   IELIASENF S AV+E  GS L NKY+EG PG+RYYG
Sbjct: 3   YLPQQDPQVFAAIEQERKRQHAKIELIASENFVSRAVMEAQGSVLTNKYAEGYPGRRYYG 62

Query: 70  GNQFIDEIEIVAQQRSLKAFNLDPEQWGC---NVQPYSG--------------------- 105
           G +++D +E +A++R+ + F       G    NVQP+SG                     
Sbjct: 63  GCEYVDIVEELARERAKQLF-------GAEHANVQPHSGAQANMAVYFTVLEHGDTVLGM 115

Query: 106 -----------SPANFA-----VCEKALPTNNARFDF--------------LSSGTTCYS 135
                      SP NF+          +       D+              + +    Y 
Sbjct: 116 NLSHGGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYDDVREKARLHRPKLIVAAAAAYP 175

Query: 136 RCLDYARFRQICDETDSIMFADMSHISGLIAGVKG-----------VTKTGEKIL----- 179
           R +D+A+FR+I DE  + +  DM+HI+GL+A   G           VT T  K L     
Sbjct: 176 RIIDFAKFREIADEVGAYLMVDMAHIAGLVAA--GLHPNPVPYAHFVTTTTHKTLRGPRG 233

Query: 180 ------YDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLS 233
                   + ++I+ A+FP +QGGP  H I A A A  +A  D+FK+Y  +V  NA  L+
Sbjct: 234 GMILCQEQFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLA 293

Query: 234 DEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
             +   G+ +V+GGTD HL+L+DLR  +LTG   E VL+E+ I  NKNT
Sbjct: 294 SALQNEGFTLVSGGTDNHLLLVDLRPQQLTGKTAEKVLDEVGITVNKNT 342

>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} Length = 417

 Score =  294 bits (756), Expect = 5e-98
 Identities = 116/352 (32%), Positives = 164/352 (46%), Gaps = 91/352 (25%)

Query: 10  TLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYG 69
           +L   D E++ L  KE  RQ  G+E+IASENFT   V+E +GS L NKY+EG PGKRYYG
Sbjct: 5   SLEMFDKEIFDLTNKELERQCEGLEMIASENFTLPEVMEVMGSILTNKYAEGYPGKRYYG 64

Query: 70  GNQFIDEIEIVAQQRSLKAFNLDPEQWGC---NVQPYS---------------------- 104
           G +F+DEIE +A +R  K F        C   NVQP S                      
Sbjct: 65  GCEFVDEIETLAIERCKKLF-------NCKFANVQPNSGSQANQGVYAALINPGDKILGM 117

Query: 105 ----------GSPANF---------------------AVCEKALPTNNARFDFLSSGTTC 133
                     G+  +                       V E A      +   +  G + 
Sbjct: 118 DLSHGGHLTHGAKVSSSGKMYESCFYGVELDGRIDYEKVREIAKKE---KPKLIVCGASA 174

Query: 134 YSRCLDYARFRQICDETDSIMFADMSHISGLIAGVKG-----------VTKTGEKIL--- 179
           Y+R +D+A+FR+I DE  + +FAD++HI+GL+    G           V+ T  K L   
Sbjct: 175 YARVIDFAKFREIADEIGAYLFADIAHIAGLVVA--GEHPSPFPYAHVVSSTTHKTLRGP 232

Query: 180 ---------YDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANAS 230
                     +  +KIN+A+FP +QGGP  H I A A       SDE+K Y  QV+ NA 
Sbjct: 233 RGGIIMTNDEELAKKINSAIFPGIQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQ 292

Query: 231 HLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
            L++ ++ R + +V+ GTD HL+L+     + +G   +L L    I  NKNT
Sbjct: 293 VLANVLMDRKFKLVSDGTDNHLVLMSFLDREFSGKDADLALGNAGITANKNT 344

>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei} Length = 425

 Score =  294 bits (756), Expect = 7e-98
 Identities = 124/358 (34%), Positives = 169/358 (47%), Gaps = 86/358 (24%)

Query: 2   SSSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEG 61
           +++     +LA+ D  +   I KE  RQ + +ELIASEN  S AVL+  GS L NKY+EG
Sbjct: 4   NANPFFSQSLAERDASVRGAILKELERQQSQVELIASENIVSRAVLDAQGSVLTNKYAEG 63

Query: 62  LPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGC---NVQPYS-------------- 104
            PGKRYYGG +F DE+E +A +R  + F            NVQP+S              
Sbjct: 64  YPGKRYYGGCEFADEVEALAIERVKRLF-------NAGHANVQPHSGAQANGAVMLALAK 116

Query: 105 ------------------GSPANFA-----VCEKALPTNNARFDF--------------L 127
                             G+    +       +  +  +    D+              +
Sbjct: 117 PGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSRDTMLIDYDQVEALAQQHKPSLI 176

Query: 128 SSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIAGVKG-----------VTKTGE 176
            +G + Y R LD+ARFR I D   + +  DM+HI+G+IA   G           VT T  
Sbjct: 177 IAGFSAYPRKLDFARFRAIADSVGAKLMVDMAHIAGVIAA--GRHANPVEHAHVVTSTTH 234

Query: 177 KIL------------YDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQ 224
           K L             +  +KIN+AVFP LQGGP  H I   A A  +A +D+FK+Y  +
Sbjct: 235 KTLRGPRGGFVLTNDEEIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALTDDFKTYIDR 294

Query: 225 VKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
           V ANA  L D +   G  +VTGGTD HL+L+DLR   L G++VE  LE   I CNKN 
Sbjct: 295 VLANAQALGDVLKAGGVDLVTGGTDNHLLLVDLRPKGLKGAQVEQALERAGITCNKNG 352

>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} PDB: 1dfo_A* 3g8m_A* 1eqb_A* Length = 420

 Score =  294 bits (756), Expect = 8e-98
 Identities = 122/363 (33%), Positives = 168/363 (46%), Gaps = 96/363 (26%)

Query: 1   MSSSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSE 60
           M    M    +A  D EL+  +++EK RQ   IELIASEN+TS  V++  GS L NKY+E
Sbjct: 4   MLKREM---NIADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAE 60

Query: 61  GLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGC---NVQPYS------------- 104
           G PGKRYYGG +++D +E +A  R+ + F       G    NVQP+S             
Sbjct: 61  GYPGKRYYGGCEYVDVVEQLAIDRAKELF-------GADYANVQPHSGSQANFAVYTALL 113

Query: 105 -------------------GSPANF---------------------AVCEKALPTNNARF 124
                              GSP NF                      + + A      + 
Sbjct: 114 QPGDTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGIDESGKIDYDEMAKLAKEH---KP 170

Query: 125 DFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIAGVKG-----------VTK 173
             +  G + YS  +D+A+ R+I D   + +F DM+H++GLIA   G           VT 
Sbjct: 171 KMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLIAA--GVYPNPVPHAHVVTT 228

Query: 174 TGEKIL--------------YDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFK 219
           T  K L               +  +K+N+AVFPS QGGP  H I   A A+ +A   EFK
Sbjct: 229 TTHKTLAGPRGGLILAKGGDEELYKKLNSAVFPSAQGGPLMHVIAGKAVALKEAMEPEFK 288

Query: 220 SYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACN 279
            YQ QV  NA  + +  + RGY VV+GGT+ HL L+DL    LTG + +  L    I  N
Sbjct: 289 VYQQQVAKNAKAMVEVFLNRGYKVVSGGTENHLFLLDLVDKNLTGKEADAALGRANITVN 348

Query: 280 KNT 282
           KN+
Sbjct: 349 KNS 351

>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis} Length = 447

 Score =  289 bits (742), Expect = 2e-95
 Identities = 116/362 (32%), Positives = 163/362 (45%), Gaps = 90/362 (24%)

Query: 2   SSSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEG 61
                +   LA+ DP++  L+ KE  RQ + +E+IASENF   AVL+  GS L NKY+EG
Sbjct: 17  QGPGSMSAPLAEVDPDIAELLAKELGRQRDTLEMIASENFVPRAVLQAQGSVLTNKYAEG 76

Query: 62  LPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGC---NVQPYSG------------- 105
           LPG+RYYGG + +D +E +A+ R+   F       G    NVQP+SG             
Sbjct: 77  LPGRRYYGGCEHVDVVENLARDRAKALF-------GAEFANVQPHSGAQANAAVLHALMS 129

Query: 106 -------------------SPANFA-----VCEKALPTNNARFDF--------------L 127
                                 NF+          +       D               +
Sbjct: 130 PGERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVDPATHLIDMDAVRATALEFRPKVI 189

Query: 128 SSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIAGVKG-----------VTKTGE 176
            +G + Y R LD+A FR I DE  + +  DM+H +GL+A   G           V+ T  
Sbjct: 190 IAGWSAYPRVLDFAAFRSIADEVGAKLLVDMAHFAGLVAA--GLHPSPVPHADVVSTTVH 247

Query: 177 KIL-----------YDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQV 225
           K L             Y + IN+AVFP  QGGP  H I   A A+  A + EF   Q + 
Sbjct: 248 KTLGGGRSGLIVGKQQYAKAINSAVFPGQQGGPLMHVIAGKAVALKIAATPEFADRQRRT 307

Query: 226 KANASHLSDEMI-----KRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNK 280
            + A  ++D ++     K G  VV+GGTDVHL+L+DLR + L G   E +L E+ I  N+
Sbjct: 308 LSGARIIADRLMAPDVAKAGVSVVSGGTDVHLVLVDLRDSPLDGQAAEDLLHEVGITVNR 367

Query: 281 NT 282
           N 
Sbjct: 368 NA 369

>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A* Length = 483

 Score =  252 bits (645), Expect = 2e-80
 Identities = 105/280 (37%), Positives = 139/280 (49%), Gaps = 76/280 (27%)

Query: 130 GTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIAG---------------------- 167
           GT+CYSR LDY R R+I DE  + + ADM+HISGL+                        
Sbjct: 200 GTSCYSRNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFEHCHVVTTTTHKTLR 259

Query: 168 -------------VKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQ 214
                             KTG++ILY+ E  IN+AVFP LQGGPHNHAI  +A A+ QA 
Sbjct: 260 GCRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAM 319

Query: 215 SDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEI 274
           + EFK YQ QV AN   LS  +++ GY +VTGG+D HLIL+DLR     G + E VLE  
Sbjct: 320 TPEFKEYQRQVVANCRALSAALVELGYKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEAC 379

Query: 275 AIACNKNT---------------------------------------GISLAAEIQAISG 295
           +IACNKNT                                       GI L  +IQ  +G
Sbjct: 380 SIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIELTVQIQDDTG 439

Query: 296 PK--LVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPG 333
           P+  L +F+  L  +E   + V AL++E+E ++  F +PG
Sbjct: 440 PRATLKEFKEKLAGDEKHQRAVRALRQEVESFAALFPLPG 479

>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A* Length = 483

 Score =  216 bits (552), Expect = 1e-66
 Identities = 71/111 (63%), Positives = 85/111 (76%)

Query: 2   SSSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEG 61
           S   ML   L  +D E+Y +IKKE +RQ  G+ELIASENF S AVLE LGSCL NKYS G
Sbjct: 16  SHEQMLAQPLKDSDAEVYDIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSLG 75

Query: 62  LPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112
            PG+RYYGG + IDE+E + Q+R+L+A+ LDP+ WG NVQPYSGSPANFAV
Sbjct: 76  YPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPYSGSPANFAV 126

>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} SCOP: c.67.1.4 PDB: 3ou5_A Length = 490

 Score =  248 bits (635), Expect = 5e-79
 Identities = 96/278 (34%), Positives = 145/278 (52%), Gaps = 75/278 (26%)

Query: 130 GTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIAG---------------------- 167
           GT+ Y+R +DYAR R++CDE  + + ADM+HISGL+A                       
Sbjct: 210 GTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTLR 269

Query: 168 -------------VKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQ 214
                             KTG +I Y +E++IN AVFPSLQGGPHNHAI A+A A+ QA 
Sbjct: 270 GARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQAC 329

Query: 215 SDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEI 274
           +  F+ Y  QV  NA  ++D +++RGY +V+GGTD HL+L+DLR   L G++ E VLE +
Sbjct: 330 TPMFREYSLQVLKNARAMADALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELV 389

Query: 275 AIACNKNT---------------------------------------GISLAAEIQAISG 295
           +I  NKNT                                       G+++  E+++ + 
Sbjct: 390 SITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNIGLEVKSKTA 449

Query: 296 PKLVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPG 333
            KL DF++ L K+ +  +++A L++ +E ++  F MPG
Sbjct: 450 -KLQDFKSFLLKDSETSQRLANLRQRVEQFARAFPMPG 486

>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} SCOP: c.67.1.4 PDB: 3ou5_A Length = 490

 Score =  212 bits (542), Expect = 4e-65
 Identities = 69/103 (66%), Positives = 86/103 (83%)

Query: 10  TLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYG 69
           +L+ +DPE++ L+++EK RQ  G+ELIASENF S A LE LGSCL NKYSEG PGKRYYG
Sbjct: 34  SLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYG 93

Query: 70  GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112
           G + +DEIE++ Q+R+L+AF+LDP QWG NVQPYSGSPAN AV
Sbjct: 94  GAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAV 136

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.7 bits (102), Expect = 8e-05
 Identities = 63/360 (17%), Positives = 112/360 (31%), Gaps = 119/360 (33%)

Query: 6   MLHGTLAQTDPELYSLIKKEKH--RQINGIE-----LIASENF-TSLAVLECLGSCLQNK 57
           ML   L Q DP   S      +   +I+ I+     L+ S+ +   L VL          
Sbjct: 201 MLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVL---------- 250

Query: 58  YSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL 117
                                 V   ++  AFNL      C                K L
Sbjct: 251 -----------------LN---VQNAKAWNAFNL-----SC----------------KIL 269

Query: 118 PTNNARFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIAGVKGVTKT-GE 176
            T           T          RF+Q+   TD +  A  +HIS L      +T    +
Sbjct: 270 LT-----------T----------RFKQV---TDFLSAATTTHIS-LDHHSMTLTPDEVK 304

Query: 177 KILYDYEEKINNAVF--PS--LQGGPHNHAIGAIATAMLQ---AQSDEFKSYQAQ----- 224
            +L  Y   ++      P   L   P    +  IA   ++   A  D +K          
Sbjct: 305 SLLLKY---LDCRPQDLPREVLTTNP--RRLSIIA-ESIRDGLATWDNWKHVNCDKLTTI 358

Query: 225 VKANASHLSDEMIKRGYH---VVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIAC--- 278
           ++++ + L     ++ +    V      +  IL+ L    +  S V +V+ ++       
Sbjct: 359 IESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVE 418

Query: 279 --NKNTGISLAAEIQAISGPKLVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPGQAD 336
              K + IS+ +    +     ++ +  LH++  IV      K     + +   +P   D
Sbjct: 419 KQPKESTISIPSIYLELKVK--LENEYALHRS--IVDHYNIPKT----FDSDDLIPPYLD 470

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	337
3ou5_A	490	Serine hydroxymethyltransferase, mitochondrial; st	100.0
2a7v_A	490	Serine hydroxymethyltransferase; structural genomi	100.0
1rv3_A	483	Serine hydroxymethyltransferase, cytosolic; one-ca	100.0
3h7f_A	447	Serine hydroxymethyltransferase 1; cytoplasm, one-	100.0
3n0l_A	417	Serine hydroxymethyltransferase; alpha beta class,	100.0
3gbx_A	420	Serine hydroxymethyltransferase; structural genomi	100.0
3ecd_A	425	Serine hydroxymethyltransferase 2; ssgcid, decode,	100.0
2vi8_A	405	Serine hydroxymethyltransferase; SHMT, E53Q, FTHF,	99.96
2dkj_A	407	Serine hydroxymethyltransferase; PLP dependent enz	99.95
2w8t_A	427	SPT, serine palmitoyltransferase; HET: LLP; 1.25A	99.75
3kki_A	409	CAI-1 autoinducer synthase; quorum sensing, CQSA,	99.72
3tqx_A	399	2-amino-3-ketobutyrate coenzyme A ligase; energy m	99.71
3hvy_A	427	Cystathionine beta-lyase family protein, YNBB B.S	99.7
1fc4_A	401	2-amino-3-ketobutyrate conenzyme A ligase; 2-amino	99.65
1bs0_A	384	Protein (8-amino-7-oxonanoate synthase); PLP-depen	99.62
3i16_A	427	Aluminum resistance protein; YP_878183.1, carbon-s	99.61
1t3i_A	420	Probable cysteine desulfurase; PLP-binding enzyme,	99.6
1kmj_A	406	Selenocysteine lyase; persulfide perselenide NIFS	99.6
3m5u_A	361	Phosphoserine aminotransferase; alpha-beta half sa	99.59
4hvk_A	382	Probable cysteine desulfurase 2; transferase and I	99.59
3ffr_A	362	Phosphoserine aminotransferase SERC; structural ge	99.59
2bwn_A	401	5-aminolevulinate synthase; tetrapyrrole biosynthe	99.58
1iug_A	352	Putative aspartate aminotransferase; wild type, py	99.57
3e77_A	377	Phosphoserine aminotransferase; SERC, PLP, structu	99.57
3zrp_A	384	Serine-pyruvate aminotransferase (AGXT); HET: PLP;	99.57
3a2b_A	398	Serine palmitoyltransferase; vitamin B6-dependent	99.57
3f0h_A	376	Aminotransferase; RER070207000802, structural geno	99.56
3jzl_A	409	Putative cystathionine beta-lyase involved in ALU	99.56
3nnk_A	411	Ureidoglycine-glyoxylate aminotransferase; PLP-dep	99.55
2huf_A	393	Alanine glyoxylate aminotransferase; alpha and bet	99.55
3hdo_A	360	Histidinol-phosphate aminotransferase; PSI-II, his	99.54
3hbx_A	502	GAD 1, glutamate decarboxylase 1; calmodulin-bindi	99.54
2dr1_A	386	PH1308 protein, 386AA long hypothetical serine ami	99.53
3isl_A	416	Purine catabolism protein PUCG; pyridoxalphosphate	99.53
3mc6_A	497	Sphingosine-1-phosphate lyase; carboxy-lyase activ	99.53
1m32_A	366	2-aminoethylphosphonate-pyruvate aminotransferase;	99.53
2yrr_A	353	Aminotransferase, class V; structural genomics, NP	99.53
2z9v_A	392	Aspartate aminotransferase; pyridoxamine, pyruvate	99.52
1eg5_A	384	Aminotransferase; PLP-dependent enzymes, iron-sulf	99.52
3lvm_A	423	Cysteine desulfurase; structural genomics, montrea	99.51
1vjo_A	393	Alanine--glyoxylate aminotransferase; 17130350, AL	99.51
3kgw_A	393	Alanine-glyoxylate aminotransferase; AAH25799.1, p	99.51
1c4k_A	730	Protein (ornithine decarboxylase); lyase; HET: PLP	99.49
3n75_A	715	LDC, lysine decarboxylase, inducible; pyridoxal-5'	99.49
3ht4_A	431	Aluminum resistance protein; lyase, putative cysta	99.49
1elu_A	390	L-cysteine/L-cystine C-S lyase; FES cluster biosyn	99.49
3cai_A	406	Possible aminotransferase; RV3778C; 1.80A {Mycobac	99.48
3qm2_A	386	Phosphoserine aminotransferase; structural genomic	99.48
3f9t_A	397	TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L	99.47
3dzz_A	391	Putative pyridoxal 5'-phosphate-dependent C-S LYA;	99.47
3h14_A	391	Aminotransferase, classes I and II; YP_167802.1, S	99.47
2c0r_A	362	PSAT, phosphoserine aminotransferase; pyridoxal-5'	99.46
2ch1_A	396	3-hydroxykynurenine transaminase; PLP-enzyme, kynu	99.46
3ly1_A	354	Putative histidinol-phosphate aminotransferase; st	99.45
3ffh_A	363	Histidinol-phosphate aminotransferase; APC88260, l	99.45
1qz9_A	416	Kynureninase; kynurenine, tryptophan, PLP, vitamin	99.45
4eb5_A	382	Probable cysteine desulfurase 2; scaffold, transfe	99.44
3ei9_A	432	LL-diaminopimelate aminotransferase; lysine biosyn	99.44
2e7j_A	371	SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-st	99.42
1gd9_A	389	Aspartate aminotransferase; pyridoxal enzyme, temp	99.42
3b8x_A	390	WBDK, pyridoxamine 5-phosphate-dependent dehydrase	99.42
3dr4_A	391	Putative perosamine synthetase; deoxysugar, pyrido	99.41
2fyf_A	398	PSAT, phosphoserine aminotransferase; PLP-dependen	99.4
3p1t_A	337	Putative histidinol-phosphate aminotransferase; PL	99.4
3qgu_A	449	LL-diaminopimelate aminotransferase; L-lysine, pyr	99.39
3kax_A	383	Aminotransferase, classes I and II; PLP, C-S lyase	99.39
3get_A	365	Histidinol-phosphate aminotransferase; NP_281508.1	99.38
3lws_A	357	Aromatic amino acid beta-eliminating lyase/threoni	99.38
3pj0_A	359	LMO0305 protein; structural genomics, joint center	99.38
3euc_A	367	Histidinol-phosphate aminotransferase 2; YP_297314	99.37
2fnu_A	375	Aminotransferase; protein-product complex, structu	99.36
4dq6_A	391	Putative pyridoxal phosphate-dependent transferas;	99.36
3e9k_A	465	Kynureninase; kynurenine-L-hydrolase, kynurenine h	99.36
1w23_A	360	Phosphoserine aminotransferase; pyridoxal-5'-phosp	99.36
3vax_A	400	Putative uncharacterized protein DNDA; desulfurase	99.35
2vyc_A	755	Biodegradative arginine decarboxylase; pyridoxal p	99.34
3nra_A	407	Aspartate aminotransferase; structural genomics, j	99.33
3l8a_A	421	METC, putative aminotransferase, probable beta-cys	99.32
3bb8_A	437	CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartat	99.3
2bkw_A	385	Alanine-glyoxylate aminotransferase 1; analine-gly	99.3
2z61_A	370	Probable aspartate aminotransferase 2; amino acid	99.3
3mad_A	514	Sphingosine-1-phosphate lyase; carboxy-lyase activ	99.3
3ke3_A	379	Putative serine-pyruvate aminotransferase; structu	99.27
3ftb_A	361	Histidinol-phosphate aminotransferase; structural	99.27
3fdb_A	377	Beta C-S lyase, putative PLP-dependent beta-cystat	99.27
1gc0_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate; HE	99.27
3frk_A	373	QDTB; aminotransferase, sugar-modification, natura	99.27
2x5d_A	412	Probable aminotransferase; HET: LLP PLP; 2.25A {Ps	99.27
1c7n_A	399	Cystalysin; transferase, aminotransferase, pyridox	99.27
3nyt_A	367	Aminotransferase WBPE; PLP binding, nucleotide-sug	99.26
3g0t_A	437	Putative aminotransferase; NP_905498.1, putative a	99.25
1v2d_A	381	Glutamine aminotransferase; PLP, riken structural	99.25
1j32_A	388	Aspartate aminotransferase; HET: PLP; 2.10A {Phorm	99.24
3vp6_A	511	Glutamate decarboxylase 1; catalytic loop SWAP, ly	99.24
3dyd_A	427	Tyrosine aminotransferase; PLP, SGC, structural ge	99.23
1mdo_A	393	ARNB aminotransferase; type 1 aminotransferase fol	99.23
1b9h_A	388	AHBA synthase, protein (3-amino-5-hydroxybenzoic a	99.23
2o1b_A	404	Aminotransferase, class I; aminotrasferase; HET: P	99.23
3ruy_A	392	Ornithine aminotransferase; structural genomics, c	99.23
2dou_A	376	Probable N-succinyldiaminopimelate aminotransfera;	99.23
1o69_A	394	Aminotransferase; structural genomics, unknown fun	99.22
3cq5_A	369	Histidinol-phosphate aminotransferase; PLP, PMP, a	99.21
2c81_A	418	Glutamine-2-deoxy-scyllo-inosose aminotransferase;	99.21
2gb3_A	409	Aspartate aminotransferase; TM1698, structural gen	99.2
1u08_A	386	Hypothetical aminotransferase YBDL; alpha beta pro	99.2
3piu_A	435	1-aminocyclopropane-1-carboxylate synthase; fruit	99.2
2oga_A	399	Transaminase; PLP-dependent enzyme, desosamine, de	99.2
3ju7_A	377	Putative PLP-dependent aminotransferase; NP_978343	99.2
1jg8_A	347	L-ALLO-threonine aldolase; glycine biosynthesis, p	99.2
2dgk_A	452	GAD-beta, GADB, glutamate decarboxylase beta; gadb	99.19
3fvs_A	422	Kynurenine--oxoglutarate transaminase 1; alpha bet	99.19
3fkd_A	350	L-threonine-O-3-phosphate decarboxylase; structura	99.19
2z67_A	456	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	99.19
1o4s_A	389	Aspartate aminotransferase; TM1255, structural gen	99.18
2po3_A	424	4-dehydrase; external aldimine, PLP, aminotransfer	99.18
1wyu_B	474	Glycine dehydrogenase subunit 2 (P-protein); alpha	99.17
3uwc_A	374	Nucleotide-sugar aminotransferase; lipopolysacchar	99.17
2o0r_A	411	RV0858C (N-succinyldiaminopimelate aminotransfera;	99.17
2x3l_A	446	ORN/Lys/Arg decarboxylase family protein; lyase; H	99.16
2zc0_A	407	Alanine glyoxylate transaminase; alanine:glyoxylat	99.16
2oat_A	439	Ornithine aminotransferase; 5-fluoromethylornithin	99.15
4adb_A	406	Succinylornithine transaminase; transferase, PLP e	99.15
1d2f_A	390	MALY protein; aminotransferase fold, large PLP-bin	99.13
1z7d_A	433	Ornithine aminotransferase; structural genomics co	99.13
3nx3_A	395	Acoat, acetylornithine aminotransferase; csgid, st	99.12
3a9z_A	432	Selenocysteine lyase; PLP, cytoplasm, pyridoxal ph	99.12
3k40_A	475	Aromatic-L-amino-acid decarboxylase; PLP dependent	99.11
2qma_A	497	Diaminobutyrate-pyruvate transaminase and L-2,4- d	99.11
1xi9_A	406	Putative transaminase; alanine aminotransferase, s	99.1
1yiz_A	429	Kynurenine aminotransferase; glutamine transaminas	99.1
4e1o_A	481	HDC, histidine decarboxylase; lyase; HET: PLP PVH;	99.09
3e2y_A	410	Kynurenine-oxoglutarate transaminase 3; alpha beta	99.09
3op7_A	375	Aminotransferase class I and II; PLP-dependent tra	99.09
1pff_A	331	Methionine gamma-lyase; homocysteine; 2.50A {Trich	99.09
1uu1_A	335	Histidinol-phosphate aminotransferase; histidine b	99.09
1vef_A	395	Acetylornithine/acetyl-lysine aminotransferase; PL	99.07
1svv_A	359	Threonine aldolase; structural genomics, structura	99.06
1lc5_A	364	COBD, L-threonine-O-3-phosphate decarboxylase; PLP	99.06
3ezs_A	376	Aminotransferase ASPB; NP_207418.1, structural gen	99.05
1wyu_A	438	Glycine dehydrogenase (decarboxylating) subunit 1;	99.04
1b5p_A	385	Protein (aspartate aminotransferase); pyridoxal en	99.04
2eh6_A	375	Acoat, acetylornithine aminotransferase; ARGD, str	99.03
3ele_A	398	Amino transferase; RER070207001803, structural gen	99.02
2cb1_A	412	O-acetyl homoserine sulfhydrylase; PLP enzyme, lya	98.99
1vp4_A	425	Aminotransferase, putative; structural genomics, j	98.99
2zyj_A	397	Alpha-aminodipate aminotransferase; alpha-aminoadi	98.99
1s0a_A	429	Adenosylmethionine-8-amino-7-oxononanoate aminotra	98.98
2pb2_A	420	Acetylornithine/succinyldiaminopimelate aminotran;	98.97
3jtx_A	396	Aminotransferase; NP_283882.1, structural genomics	98.96
2rfv_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate, PL	98.96
2ord_A	397	Acoat, acetylornithine aminotransferase; TM1785, a	98.96
3asa_A	400	LL-diaminopimelate aminotransferase; PLP dependent	98.95
1fg7_A	356	Histidinol phosphate aminotransferase; HISC, histi	98.95
2fq6_A	415	Cystathionine beta-lyase; protein-inhibitor comple	98.93
2ez2_A	456	Beta-tyrosinase, tyrosine phenol-lyase; PLP-depend	98.93
1js3_A	486	DDC;, DOPA decarboxylase; carbidopa, parkinson'S d	98.93
2oqx_A	467	Tryptophanase; lyase, pyridoxal phosphate, tryptop	98.92
1v72_A	356	Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2	98.92
3if2_A	444	Aminotransferase; YP_265399.1, structura genomics,	98.91
3qhx_A	392	Cystathionine gamma-synthase METB (CGS); structura	98.91
3ri6_A	430	O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate	98.9
1cs1_A	386	CGS, protein (cystathionine gamma-synthase); lyase	98.9
3b46_A	447	Aminotransferase BNA3; kynurenine aminotransferase	98.9
1qgn_A	445	Protein (cystathionine gamma-synthase); methionine	98.9
3tfu_A	457	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	98.88
1e5e_A	404	MGL, methionine gamma-lyase; methionine biosynthes	98.87
1bw0_A	416	TAT, protein (tyrosine aminotransferase); tyrosine	98.87
3acz_A	389	Methionine gamma-lyase; L-methionine; HET: LLP; 1.	98.87
3aow_A	448	Putative uncharacterized protein PH0207; protein-P	98.86
3dxv_A	439	Alpha-amino-epsilon-caprolactam racemase; fold-TYP	98.86
1ax4_A	467	Tryptophanase; tryptophan biosynthesis, tryptophan	98.86
3i5t_A	476	Aminotransferase; pyridoxal 5'-phosphate, PSI-2, N	98.85
2jis_A	515	Cysteine sulfinic acid decarboxylase; pyridoxal ph	98.84
3g7q_A	417	Valine-pyruvate aminotransferase; NP_462565.1, str	98.83
2epj_A	434	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	98.83
3rq1_A	418	Aminotransferase class I and II; structural genomi	98.83
1iay_A	428	ACC synthase 2, 1-aminocyclopropane-1-carboxylate	98.82
3l44_A	434	Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha	98.82
3gju_A	460	Putative aminotransferase; pyridoxal phosphate, PL	98.82
1sff_A	426	4-aminobutyrate aminotransferase; enzyme complexes	98.81
2aeu_A	374	Hypothetical protein MJ0158; selenocysteine syntha	98.81
3tcm_A	500	Alanine aminotransferase 2; pyridoxal phosphate (P	98.81
4eu1_A	409	Mitochondrial aspartate aminotransferase; ssgcid,	98.81
3ihj_A	498	Alanine aminotransferase 2; helix, structural geno	98.81
2okj_A	504	Glutamate decarboxylase 1; PLP-dependent decarboxy	98.8
3n5m_A	452	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	98.8
2ctz_A	421	O-acetyl-L-homoserine sulfhydrylase; crystal, O-ac	98.8
3cog_A	403	Cystathionine gamma-lyase; CTH, PLP, propargylglyc	98.79
3ndn_A	414	O-succinylhomoserine sulfhydrylase; seattle struct	98.77
2r2n_A	425	Kynurenine/alpha-aminoadipate aminotransferase mit	98.77
3t18_A	413	Aminotransferase class I and II; PSI-biology, MCSG	98.76
3b1d_A	392	Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococ	98.23
2e7u_A	424	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	98.75
7aat_A	401	Aspartate aminotransferase; transferase(aminotrans	98.74
3hmu_A	472	Aminotransferase, class III; structural genomics,	98.73
3a8u_X	449	Omega-amino acid--pyruvate aminotransferase; large	98.72
3i4j_A	430	Aminotransferase, class III; structural GENOMICS,N	98.71
3k28_A	429	Glutamate-1-semialdehyde 2,1-aminomutase 2; biosyn	98.71
3dod_A	448	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	98.71
2eo5_A	419	419AA long hypothetical aminotransferase; PLP enzy	98.71
3hl2_A	501	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	98.68
4e77_A	429	Glutamate-1-semialdehyde 2,1-aminomutase; structur	98.68
2cy8_A	453	D-phgat, D-phenylglycine aminotransferase; structu	98.66
3nmy_A	400	Xometc, cystathionine gamma-lyase-like protein; Cy	98.65
4ao9_A	454	Beta-phenylalanine aminotransferase; HET: PLP; 1.5	98.65
1n8p_A	393	Cystathionine gamma-lyase; three open alpha/beta s	98.64
4a6r_A	459	Omega transaminase; transferase, PLP-binding enzym	98.63
3fq8_A	427	Glutamate-1-semialdehyde 2,1-aminomutase; drug res	98.63
3fsl_A	397	Aromatic-amino-acid aminotransferase; tyrosine ami	98.61
3ez1_A	423	Aminotransferase MOCR family; YP_604413.1, struct	98.6
4ffc_A	453	4-aminobutyrate aminotransferase (GABT); structura	98.59
4f4e_A	420	Aromatic-amino-acid aminotransferase; ssgcid, stru	98.58
3oks_A	451	4-aminobutyrate transaminase; ssgcid, transferase,	98.57
1yaa_A	412	Aspartate aminotransferase; HET: PLP; 2.05A {Sacch	98.54
2x5f_A	430	Aspartate_tyrosine_phenylalanine pyridoxal-5' phos	98.53
2ay1_A	394	Aroat, aromatic amino acid aminotransferase; HET:	98.52
2q7w_A	396	Aspartate aminotransferase; mechanism-based inhibi	98.44
1ibj_A	464	CBL, cystathionine beta-lyase; PLP-dependent enzym	98.43
3ppl_A	427	Aspartate aminotransferase; dimer, PLP-dependent t	98.42
3f6t_A	533	Aspartate aminotransferase; YP_194538.1, STRU geno	98.41
3bc8_A	450	O-phosphoseryl-tRNA(SEC) selenium transferase; dis	98.4
2cjg_A	449	L-lysine-epsilon aminotransferase; internal aldimi	98.33
3d6k_A	422	Putative aminotransferase; APC82464, corynebacteri	98.32
1ajs_A	412	Aspartate aminotransferase; PIG, in the presence o	98.28
3meb_A	448	Aspartate aminotransferase; pyridoxal PHOS transfe	98.24
1zod_A	433	DGD, 2,2-dialkylglycine decarboxylase; pyridoxal,	98.11
2yky_A	465	Beta-transaminase; transferase; HET: PLP SFE; 1.69	97.36
1ohv_A	472	4-aminobutyrate aminotransferase; PLP-dependent en	98.08
4atq_A	456	4-aminobutyrate transaminase; transferase; HET: PL	97.87
3bwn_A	391	AT1G70560, L-tryptophan aminotransferase; auxin sy	97.76
4e3q_A	473	Pyruvate transaminase; aminotransferase, transfera	97.64
2zy4_A	546	L-aspartate beta-decarboxylase; pyridoxal 5'-phosp	97.01
2hox_A	427	ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINA	96.98
4h51_A	420	Aspartate aminotransferase; ssgcid, structural gen	96.98
3k7y_A	405	Aspartate aminotransferase; aminotrans pyridoxal p	96.73
4a0g_A	831	Adenosylmethionine-8-amino-7-oxononanoate aminotra	96.61

>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}

Probab=100.00  E-value=3.7e-91  Score=682.20  Aligned_cols=333  Identities=50%  Similarity=0.846  Sum_probs=298.0

Q ss_pred             chhh-hhhhhhhcHHHHHHHHHHHhhcccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHH
Q psy10669          4 STML-HGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQ   82 (337)
Q Consensus         4 ~~~~-~~~l~~~d~~~~~~~~~e~~rq~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~   82 (337)
                      +.|. +++|++.||||+++|++|.+||+++|+|||||||+||.|++|++|+|+|||+||+||+|||+||+++|++|.+|+
T Consensus        27 ~~~~~~~~l~~~Dpei~~~i~~E~~RQ~~~ieLIASEN~~S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la~  106 (490)
T 3ou5_A           27 RGWTGQESLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQ  106 (490)
T ss_dssp             -CCSSCCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGTCCCCC----------CHHHHHHHHHH
T ss_pred             cccccccchhhhCHHHHHHHHHHHHHHHcCceEecCCCcCCHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHHH
Confidence            3463 678999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc-------------------------------------------
Q psy10669         83 QRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT-------------------------------------------  119 (337)
Q Consensus        83 ~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~-------------------------------------------  119 (337)
                      +|++++||+++++||+||||+||++||++||.||++|                                           
T Consensus       107 ~rak~lF~a~~A~w~VNVQP~SGs~AN~avy~All~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd~~  186 (490)
T 3ou5_A          107 RRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPK  186 (490)
T ss_dssp             HHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHCC-CCCEECBC----------------------------CBCEETT
T ss_pred             HHHHHHhCCCccccCCCCCcCCHHHHHHHHHHHHcCCCCEEEecccCCCCcccccccCCCcccccccccccccccccCCC
Confidence            9999999999999999999999999999999999876                                           


Q ss_pred             ----------ccc---cccEEEEcCcccccccChHHHHHHhhhcCCeEEEeccccccccce------------eeeec--
Q psy10669        120 ----------NNA---RFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIAG------------VKGVT--  172 (337)
Q Consensus       120 ----------~~a---~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~g------------~~~T~--  172 (337)
                                +++   |||+||+|.|+|++++|++++++|||++||+||+|+||.+|||++            +++|+  
T Consensus       187 t~~IDyd~~~~~A~~~kPklIi~G~SaY~r~id~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~~~ADvVTtTTHK  266 (490)
T 3ou5_A          187 TGLIDYNQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHK  266 (490)
T ss_dssp             TTEECHHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSS
T ss_pred             CCcccHHHHHHHHhhcCCCeEEECCccCccccCHHHHHHHHhhcccEEEechhhhhhhhcccccCCccccceEEeccccc
Confidence                      222   499999999999999999999999999999999999999999992            45443  


Q ss_pred             ----cCCchhhh-----------------hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHH
Q psy10669        173 ----KTGEKILY-----------------DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASH  231 (337)
Q Consensus       173 ----~~Gg~i~~-----------------~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~  231 (337)
                          |+||+|++                 ++.++|++++||++||+||+|.|||++++++|+++++|++|++||++||++
T Consensus       267 TLrGPrGG~Il~~~~~~~~~~k~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAVaf~Ea~~p~fk~Ya~qVv~NAka  346 (490)
T 3ou5_A          267 TLRGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARA  346 (490)
T ss_dssp             TTCSCSCEEEEEECSEEEECC--CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHH
T ss_pred             cccCCCceEEEeccccccccccccchhHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHH
Confidence                46999986                 367899999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCc-----------ccchhhhhHhhhCCCHHH
Q psy10669        232 LSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT-----------GISLAAEIQAISGPKLVD  300 (337)
Q Consensus       232 l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~-----------girig~~~~t~~G~~~~~  300 (337)
                      |++.|.+.||+|++|+||||+++||+++.+++|.++++.|+++||.+|||.           ||||||+++|+|||+++|
T Consensus       347 LA~~L~~~G~~vvsGgTdnHlvLvDl~~~g~tG~~ae~~Le~agItvNkN~iP~D~sp~~~SGiRiGTpa~TtRG~~e~d  426 (490)
T 3ou5_A          347 MADALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDD  426 (490)
T ss_dssp             HHHHHHHTTCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHH
T ss_pred             HHHHHHhCCCeeecCCCCceEEEEeccccCCCHHHHHHHHHHcCcEECCCCCCCCCCCCCCCeeEECCHHHHhCCCCHHH
Confidence            999999999999999999999999999999999999999999999999988           999999999999999877


Q ss_pred             HHHH------H---------------------hhCCCcHHHHHHHHHHHHHHHhcCCCCCCCC
Q psy10669        301 FQTC------L---------------------HKNEDIVKKVAALKKEIEDYSNQFEMPGQAD  336 (337)
Q Consensus       301 ~~~~------~---------------------~~~~~~~~~~~~lr~~V~~~~~~fp~p~~~~  336 (337)
                      |.+.      +                     +++.++.+++.++|+||.+||++||+|+||+
T Consensus       427 m~~IA~~I~~~l~~~~~~~~~~~kl~~f~~~~~~~~~~~~~i~~lr~~V~~l~~~FP~pg~d~  489 (490)
T 3ou5_A          427 FRRVVDFIDEGVNIGLEVKSKTAKLQDFKSFLLKDSETSQRLANLRQRVEQFARAFPMPGFDE  489 (490)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHHHHCHHHHHHHHHHHHHHHHHHTTSCCSSCSC
T ss_pred             HHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHhcCcccHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            7542      1                     1233445678999999999999999999987

>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A

Probab=100.00  E-value=1.3e-59  Score=471.68  Aligned_cols=329  Identities=50%  Similarity=0.847  Sum_probs=281.6

Q ss_pred             hhhhhhcHHHHHHHHHHHhhcccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhh
Q psy10669          9 GTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKA   88 (337)
Q Consensus         9 ~~l~~~d~~~~~~~~~e~~rq~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~l   88 (337)
                      +.|+++||+++++|++|++||+++|+|||||||+||.|++|+.+.+.++|++|+||+|+|+|++.++++|.+|+++++++
T Consensus        33 ~~l~~~d~~~~~~~~~e~~rq~~~i~lias~n~~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~~~a~l  112 (490)
T 2a7v_A           33 ESLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEA  112 (490)
T ss_dssp             CCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHHH
T ss_pred             chhhhcCHHHHHHHHHHHHHHHcCceEECCCCCCCHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHHHHHHH
Confidence            57999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCcceeecCCCchhHHHHHHhhCCc-------------------------------------------------
Q psy10669         89 FNLDPEQWGCNVQPYSGSPANFAVCEKALPT-------------------------------------------------  119 (337)
Q Consensus        89 fg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~-------------------------------------------------  119 (337)
                      ||+++++|+++|+++|||+||.+++.+++++                                                 
T Consensus       113 ~g~~~~~~~~~v~~~sGt~An~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~~~~~iD~  192 (490)
T 2a7v_A          113 FDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDY  192 (490)
T ss_dssp             TTCCTTTEEEECCCSSHHHHHHHHHHHHCCSCEECCC-------------------------------CCBCTTTCSBCH
T ss_pred             cCCCcccCceEEeCCchHHHHHHHHHHHcCCCCEecccCccccccccchhhhcchhHHHcCCeEEEEecccccccCCcCH
Confidence            9999988988999999999999999998654                                                 


Q ss_pred             ----ccc---cccEEEEcCcccccccChHHHHHHhhhcCCeEEEeccccccccc------------eeeeec------cC
Q psy10669        120 ----NNA---RFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA------------GVKGVT------KT  174 (337)
Q Consensus       120 ----~~a---~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~------------g~~~T~------~~  174 (337)
                          +..   +||+||++.++||+.+|+++|++||+++|++|++|+||.+|+++            .+++|.      ++
T Consensus       193 d~le~~l~~~~~klIi~~~s~~~~~~dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~~~aDiv~~S~hK~l~Gp~  272 (490)
T 2a7v_A          193 NQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTLRGAR  272 (490)
T ss_dssp             HHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSGGGCSCS
T ss_pred             HHHHHHHhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEccccccccccCCcCCCCCCCCCEEEECCcccCcccc
Confidence                001   27999999999999999999999999999999999999998875            133332      45


Q ss_pred             Cchhhh--h---------------HHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHH
Q psy10669        175 GEKILY--D---------------YEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMI  237 (337)
Q Consensus       175 Gg~i~~--~---------------l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~  237 (337)
                      ||+|++  +               +.+++++.+||+++|+|+++.++|+++|++++..+++++|++++++|+++|++.|.
T Consensus       273 GG~i~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaAla~Al~~~~~~~~~~~~~~~~~na~~L~~~L~  352 (490)
T 2a7v_A          273 SGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALL  352 (490)
T ss_dssp             CEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chheeeccchhcccccccchhhHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence            888875  2               57899999999999999999999999999999878899999999999999999999


Q ss_pred             hCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCc-----------ccchhhhhHhhhCCCHHHHHH---
Q psy10669        238 KRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT-----------GISLAAEIQAISGPKLVDFQT---  303 (337)
Q Consensus       238 ~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~-----------girig~~~~t~~G~~~~~~~~---  303 (337)
                      +.|++++.+++++|+++|+++..++++.++.+.|+++||.++++.           |||||++++|+||++.+||..   
T Consensus       353 ~~G~~v~~~~t~t~lv~vdl~~~g~~~~~~~~~L~~~GI~v~~~~~p~d~~p~~~~~iRig~~a~t~~g~~~~d~~~~~~  432 (490)
T 2a7v_A          353 ERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVD  432 (490)
T ss_dssp             HTTCEEGGGSCSSSEEEEECTTTTCCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHH
T ss_pred             HcCcEEecCCCCCeEEEEEeCCCCCCHHHHHHHHHhCCeEEecCccCCCCCCCCCCceEecccccccCCCCHHHHHHHHH
Confidence            999999877799999999999988899999999999999999753           899999999999999888753   


Q ss_pred             ---HHhh---------------------CCCcHHHHHHHHHHHHHHHhcCCCCCCCCC
Q psy10669        304 ---CLHK---------------------NEDIVKKVAALKKEIEDYSNQFEMPGQADL  337 (337)
Q Consensus       304 ---~~~~---------------------~~~~~~~~~~lr~~V~~~~~~fp~p~~~~~  337 (337)
                         .++.                     ++...+++.++|++|.+||++||+|+++++
T Consensus       433 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~  490 (490)
T 2a7v_A          433 FIDEGVNIGLEVKSKTAKLQDFKSFLLKDSETSQRLANLRQRVEQFARAFPMPGFDEH  490 (490)
T ss_dssp             HHHHHHHHHHHHHHHCCSHHHHHHHHHHCHHHHHHHHHHHHHHHHHHTTSCCSSCSCC
T ss_pred             HHHHHHHhhhhhhhhhchhhHHHhhhccChhhHHHHHHHHHHHHHHHHhCCCCCcCCC
Confidence               1221                     111124588999999999999999999874

>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*

Probab=100.00  E-value=6.5e-49  Score=393.14  Aligned_cols=335  Identities=50%  Similarity=0.806  Sum_probs=290.1

Q ss_pred             cchhhhhhhhhhcHHHHHHHHHHHhhcccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHH
Q psy10669          3 SSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQ   82 (337)
Q Consensus         3 ~~~~~~~~l~~~d~~~~~~~~~e~~rq~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~   82 (337)
                      +..|+.+.|...||++++++.+|..||++.|+|++|||++||.|++++.+.+.++|++|+||+|+|+|++.++++|..++
T Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~a~e~~~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~   96 (483)
T 1rv3_A           17 HEQMLAQPLKDSDAEVYDIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQ   96 (483)
T ss_dssp             HHHHTTSCHHHHCHHHHHHHHHHHHHHHSSEECCTTCCCCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHH
T ss_pred             HHHHHhhhhhhcCHHHHHHHHHHHHHhhcCeEEEcCCCCCCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHH
Confidence            34566667999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc-------------------------------------------
Q psy10669         83 QRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT-------------------------------------------  119 (337)
Q Consensus        83 ~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~-------------------------------------------  119 (337)
                      ++++++||+++.+|+++|+++||+.||++++.+++++                                           
T Consensus        97 ~~~a~~~g~~~~~~~~~V~~~sGs~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~~  176 (483)
T 1rv3_A           97 KRALQAYGLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPD  176 (483)
T ss_dssp             HHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCTT
T ss_pred             HHHHHHhCCCcccCceEEEECCcHHHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECccccC
Confidence            9999999999877878899999999999999998654                                           


Q ss_pred             ----------cc---ccccEEEEcCcccccccChHHHHHHhhhcCCeEEEeccccccccc------------eeeee-c-
Q psy10669        120 ----------NN---ARFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA------------GVKGV-T-  172 (337)
Q Consensus       120 ----------~~---a~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~------------g~~~T-~-  172 (337)
                                +.   .+||+|+++.+++++..|+++|++||+++|++|++|+||.+|++.            .+++| + 
T Consensus       177 ~~~iD~d~le~~i~~~~tklIi~~~sn~~~~~dl~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~~~div~~s~~K  256 (483)
T 1rv3_A          177 TGYIDYDRLEENARLFHPKLIIAGTSCYSRNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFEHCHVVTTTTHK  256 (483)
T ss_dssp             TCSBCHHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGGTCSEEEEESSG
T ss_pred             CCcCCHHHHHHHHhhcCCcEEEEeCCcCCCcCCHHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCCCCcEEEecCcc
Confidence                      00   137999998888899999999999999999999999999998876            12333 2 


Q ss_pred             ----cCCchhhh--h---------------HHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHH
Q psy10669        173 ----KTGEKILY--D---------------YEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASH  231 (337)
Q Consensus       173 ----~~Gg~i~~--~---------------l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~  231 (337)
                          ++||++++  +               +.++++..+||+.+|+|+++.++++++++.++.++.++++++++.+|+++
T Consensus       257 ~l~GprgG~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~~~~~~~~~~~~~~~~~~  336 (483)
T 1rv3_A          257 TLRGCRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANCRA  336 (483)
T ss_dssp             GGCCCSCEEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCceEEEEcchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHH
Confidence                35888875  2               55678888899999999999999999999998777889999999999999


Q ss_pred             HHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccC-----------cccchhhhhHhhhCCCHHH
Q psy10669        232 LSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKN-----------TGISLAAEIQAISGPKLVD  300 (337)
Q Consensus       232 l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~-----------~girig~~~~t~~G~~~~~  300 (337)
                      |++.|.+.|++++.+++++|.++|+++..++++.++.+.|++.||.++++           .+|||+++..|+||++.+|
T Consensus       337 l~~~L~~~g~~~~~~~~~~~~~~v~~~~~g~~~~~~~~~L~~~gI~v~~~~~pg~~~~~~~~~iRis~~~~~t~g~~~ed  416 (483)
T 1rv3_A          337 LSAALVELGYKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKD  416 (483)
T ss_dssp             HHHHHHHTTCEEGGGSCSSSEEEEEGGGGTCCHHHHHHHHHHTTEECEEECCSSCSCTTSCCEEEEECHHHHHTTCCHHH
T ss_pred             HHHHHHhcCCEeccCCCCCceEEEeccCCCCCHHHHHHHHHhCCcEEecCCCCCCCcCCCCceEEeecCCcccCCCCHHH
Confidence            99999999999988767899999999887788999999999999999943           1899999999999999877


Q ss_pred             HHH------HHhhC--------C-------------CcH---HHHHHHHHHHHHHHhcCCCCCCCCC
Q psy10669        301 FQT------CLHKN--------E-------------DIV---KKVAALKKEIEDYSNQFEMPGQADL  337 (337)
Q Consensus       301 ~~~------~~~~~--------~-------------~~~---~~~~~lr~~V~~~~~~fp~p~~~~~  337 (337)
                      +..      .++..        .             .+.   +.+.++|++|.+||++||+|+++++
T Consensus       417 i~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  483 (483)
T 1rv3_A          417 FQKVAHFIHRGIELTVQIQDDTGPRATLKEFKEKLAGDEKHQRAVRALRQEVESFAALFPLPGLPGF  483 (483)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHSCHHHHHHHHHHHHHHHHHHTTSCCCSSSCC
T ss_pred             HHHHHHHHHHHHHhccchhccccccchhhHHHHhhccccchhHHHHHHHHHHHHHHHhCCCCCcCCC
Confidence            653      12221        1             111   2688999999999999999999864

>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}

Probab=100.00  E-value=7.3e-40  Score=323.69  Aligned_cols=325  Identities=38%  Similarity=0.596  Sum_probs=277.8

Q ss_pred             hhhhhhhhhcHHHHHHHHHHHhhcccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHH
Q psy10669          6 MLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRS   85 (337)
Q Consensus         6 ~~~~~l~~~d~~~~~~~~~e~~rq~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~   85 (337)
                      ++.+.+...||++++.+.+|..||.+.|+|+++||+++|.|++++.+.+.++|+.|++++|+|.|+...+.+|.++++++
T Consensus        21 ~~~~~l~~~~~~i~~~~~~~~~~~~~~i~l~~~~~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a~~~l  100 (447)
T 3h7f_A           21 SMSAPLAEVDPDIAELLAKELGRQRDTLEMIASENFVPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRA  100 (447)
T ss_dssp             GGGCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHH
T ss_pred             hhHHHHHhCCHHHHHHHHHHHHHHhCceeEecCCCCCCHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHHHHHHH
Confidence            44567889999999999999999999999999999999999999999888899999999999999999999999998899


Q ss_pred             HhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc----------------------------------------------
Q psy10669         86 LKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT----------------------------------------------  119 (337)
Q Consensus        86 a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~----------------------------------------------  119 (337)
                      +++||.+.    +.++++||+.||.+++.+++++                                              
T Consensus       101 a~~~g~~~----~~v~~~sGs~a~~~a~~~~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~  176 (447)
T 3h7f_A          101 KALFGAEF----ANVQPHSGAQANAAVLHALMSPGERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVDPATHLIDMDA  176 (447)
T ss_dssp             HHHHTCSE----EECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEECCCTTTCSCCHHH
T ss_pred             HHHcCCCc----eEEEeCCHHHHHHHHHHHhcCCCCEEEecCcccccccchhhhhhhcCCeeEEEEcCcCcccCCcCHHH
Confidence            99999986    5677899999999999998654                                              


Q ss_pred             --c-c--ccccEEEEcCcccccccChHHHHHHhhhcCCeEEEeccccccccc------------eeeeec------cCCc
Q psy10669        120 --N-N--ARFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA------------GVKGVT------KTGE  176 (337)
Q Consensus       120 --~-~--a~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~------------g~~~T~------~~Gg  176 (337)
                        + .  .+|++|+++.+++++..|+++|+++|+++|++|++|++|..|++.            .+++|.      ++||
T Consensus       177 l~~~i~~~~~~~i~~~~~~~~~~~~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~~~~di~~~s~sK~l~G~~gG  256 (447)
T 3h7f_A          177 VRATALEFRPKVIIAGWSAYPRVLDFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPVPHADVVSTTVHKTLGGGRSG  256 (447)
T ss_dssp             HHHHHHHHCCSEEEEECSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTCSEEEEESSGGGCCCSCE
T ss_pred             HHHHHHhcCCeEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCCCCCcEEEecCCcCCCCCCeE
Confidence              0 0  027899998788999999999999999999999999999887643            123332      3578


Q ss_pred             hhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-----CCEEecCCCC
Q psy10669        177 KILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-----GYHVVTGGTD  249 (337)
Q Consensus       177 ~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-----G~~v~~~~t~  249 (337)
                      ++++  ++.+.+++..+|+.+|+++++.++++++++.++..++++++++++.+|+++|++.|.+.     |++++.++++
T Consensus       257 ~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~~  336 (447)
T 3h7f_A          257 LIVGKQQYAKAINSAVFPGQQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAPDVAKAGVSVVSGGTD  336 (447)
T ss_dssp             EEEECGGGHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSHHHHHTTCEEGGGSCS
T ss_pred             EEEECHHHHHHHhhhcCCcccCCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhccccCCCeEEecCCCC
Confidence            8876  58888888889999999999999999999998876678999999999999999999988     9999876689


Q ss_pred             CeEEEEEecCCCcchHHHHHHHhhcCceeccCc------------ccchhhhhHhhhCCCHHHHHH------HHhhCCCc
Q psy10669        250 VHLILIDLRKNKLTGSKVELVLEEIAIACNKNT------------GISLAAEIQAISGPKLVDFQT------CLHKNEDI  311 (337)
Q Consensus       250 ~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~------------girig~~~~t~~G~~~~~~~~------~~~~~~~~  311 (337)
                      +|.++++++..+.++..+.+.|++.||.++++.            ++|||++..|++|++.+++.+      .+++..++
T Consensus       337 ~~~~~~~~~~~~~~~~~~~~~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~~~~~~~~~~~eei~~~~~~l~~~l~~~~~  416 (447)
T 3h7f_A          337 VHLVLVDLRDSPLDGQAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGDTEFTEVADIIATALATGSS  416 (447)
T ss_dssp             SSEEEEECTTSSCCHHHHHHHHHHTTEECBC-------------CEEEEECHHHHHHTCCHHHHHHHHHHHHHHHHSGGG
T ss_pred             CCEEEEEcCCCCCCHHHHHHHHHHCCeEEecccCCCCCCCCCCCCceeccCHHHhhCCCCHHHHHHHHHHHHHHHhccCc
Confidence            999999998888888999999999999998431            899999999999999777654      23444332


Q ss_pred             HHHHHHHHHHHHHHHhcCCCC-CCC
Q psy10669        312 VKKVAALKKEIEDYSNQFEMP-GQA  335 (337)
Q Consensus       312 ~~~~~~lr~~V~~~~~~fp~p-~~~  335 (337)
                      .+ ++++|++|.+|+..||++ +++
T Consensus       417 ~~-~~~~~~~v~~~~~~~~~~~~~~  440 (447)
T 3h7f_A          417 VD-VSALKDRATRLARAFPLYDGLE  440 (447)
T ss_dssp             CC-HHHHHHHHHHHHHHSCSSTTGG
T ss_pred             hh-HHHHHHHHHHHHHhCCCCCCch
Confidence            22 889999999999999994 454

>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0

Probab=100.00  E-value=6.3e-36  Score=289.71  Aligned_cols=320  Identities=39%  Similarity=0.640  Sum_probs=275.2

Q ss_pred             hhhhhcHHHHHHHHHHHhhcccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhc
Q psy10669         10 TLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAF   89 (337)
Q Consensus        10 ~l~~~d~~~~~~~~~e~~rq~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lf   89 (337)
                      .+..+||++++.+.+|..+|.+.|.|+++||+++|.|++++...+.+.|+.|++++++|.|+...+++|..+++.+++++
T Consensus         5 ~~~~~~~~i~~~~~~e~~~~~~~i~l~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~   84 (417)
T 3n0l_A            5 SLEMFDKEIFDLTNKELERQCEGLEMIASENFTLPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLF   84 (417)
T ss_dssp             HHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             chhhcCHHHHHHHHHHHHHHhcCeeeecccCCCCHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHHHh
Confidence            57889999999999999999999999999999999999999988878899999999999999888999999999999999


Q ss_pred             CCCCCCCcceeecCCCchhHHHHHHhhCCc----------------------------------------------c--c
Q psy10669         90 NLDPEQWGCNVQPYSGSPANFAVCEKALPT----------------------------------------------N--N  121 (337)
Q Consensus        90 g~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~----------------------------------------------~--~  121 (337)
                      |.++    .+|.++||++||..++.+++++                                              +  +
T Consensus        85 g~~~----~~i~~~sGt~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i  160 (417)
T 3n0l_A           85 NCKF----ANVQPNSGSQANQGVYAALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVELDGRIDYEKVREIA  160 (417)
T ss_dssp             TCSE----EECCCSSHHHHHHHHHHHHSCTTCEEEEECC----------------CCSEEEEECCCTTSSCCHHHHHHHH
T ss_pred             CCCC----cceEeccHHHHHHHHHHHhcCCCCEEEecccccccccchhhhhhhhcceeeeEeccCCCCCCcCHHHHHHHH
Confidence            9976    4589999999999988998654                                              0  0


Q ss_pred             --ccccEEEEcCcccccccChHHHHHHhhhcCCeEEEeccccccccc------------eeeeec------cCCchhhh-
Q psy10669        122 --ARFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA------------GVKGVT------KTGEKILY-  180 (337)
Q Consensus       122 --a~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~------------g~~~T~------~~Gg~i~~-  180 (337)
                        .+|++|+++.++++...|+++|.++|+++|++|++|++|..|++.            .+++++      +.||++++ 
T Consensus       161 ~~~~~~~v~~~~~~~G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~l~g~~~G~~~~~  240 (417)
T 3n0l_A          161 KKEKPKLIVCGASAYARVIDFAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFPYAHVVSSTTHKTLRGPRGGIIMTN  240 (417)
T ss_dssp             HHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCTTTCSEEEEESSTTTCSCSCEEEEES
T ss_pred             HhcCCeEEEECCcccCccCCHHHHHHHHHHcCCEEEEECccchhhhhcccCCCccccceEEEeeCccccCCCCeeEEEEC
Confidence              137899998778899999999999999999999999999888762            233332      34777765 


Q ss_pred             --hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEec
Q psy10669        181 --DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLR  258 (337)
Q Consensus       181 --~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~  258 (337)
                        ++.+.+....+++.+++++++.+++++.++.+....+++++++++.+++++|.+.|.+.|+++..+++.+|++++++.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~  320 (417)
T 3n0l_A          241 DEELAKKINSAIFPGIQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMDRKFKLVSDGTDNHLVLMSFL  320 (417)
T ss_dssp             CHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECT
T ss_pred             CHHHHHHHhhhhCCcccCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCCceeccCCCCceEEEEEcc
Confidence              477778877788889999999999999999887666779999999999999999999999998876688999999998


Q ss_pred             CCCcchHHHHHHHhhcCceeccCc------------ccchhhhhHhhhCCCHHHHHH------HHhhCCCcHHHHHHHHH
Q psy10669        259 KNKLTGSKVELVLEEIAIACNKNT------------GISLAAEIQAISGPKLVDFQT------CLHKNEDIVKKVAALKK  320 (337)
Q Consensus       259 ~~~~~~~~~~~~L~~~gI~v~~~~------------girig~~~~t~~G~~~~~~~~------~~~~~~~~~~~~~~lr~  320 (337)
                      ..+.+...+.+.|++.||.++...            ++|||+...++++++.+++.+      .+++...+.+.+.++++
T Consensus       321 ~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~~  400 (417)
T 3n0l_A          321 DREFSGKDADLALGNAGITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYIADILDDVNNEKLQENIKQ  400 (417)
T ss_dssp             TSSSCHHHHHHHHHHTTEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred             cCCCCHHHHHHHHHHcCeEEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHHHHHHHHHHhcccchhhHHHHHH
Confidence            878888999999999999988432            699999999999998776543      34555555678999999


Q ss_pred             HHHHHHhcCCCCC
Q psy10669        321 EIEDYSNQFEMPG  333 (337)
Q Consensus       321 ~V~~~~~~fp~p~  333 (337)
                      +|.+|+.+||+|+
T Consensus       401 ~v~~~~~~~~~~~  413 (417)
T 3n0l_A          401 ELKKLASNFIIYE  413 (417)
T ss_dssp             HHHHHHTTCCCCS
T ss_pred             HHHHHHhcCCCcc
Confidence            9999999999976

>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*

Probab=100.00  E-value=7.4e-35  Score=282.06  Aligned_cols=327  Identities=40%  Similarity=0.622  Sum_probs=259.6

Q ss_pred             cchhhhhh--hhhhcHHHHHHHHHHHhhcccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHH
Q psy10669          3 SSTMLHGT--LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIV   80 (337)
Q Consensus         3 ~~~~~~~~--l~~~d~~~~~~~~~e~~rq~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~   80 (337)
                      |++|+...  ++..||++++++.++..++.+.+.+++++||+||.|.+++...+.+.|+.|++++++|.++...+.+|.+
T Consensus         1 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~n~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (420)
T 3gbx_A            1 SNAMLKREMNIADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQL   80 (420)
T ss_dssp             CCCBCTTTCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGGCCC--------------CHHHHHH
T ss_pred             CchHHhhhcchhhcCHHHHHHHHHHHHhhhcceeeeccCCCCCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHH
Confidence            34566655  8999999999999999999999999999999999999999988778888899999999999888899999


Q ss_pred             HHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc-----------------------------------------
Q psy10669         81 AQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT-----------------------------------------  119 (337)
Q Consensus        81 ~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~-----------------------------------------  119 (337)
                      +++.+++++|.++    ..+.++||++||..++.+++++                                         
T Consensus        81 ~~~~la~~~~~~~----~~v~~~sGs~a~~~a~~~~~~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  156 (420)
T 3gbx_A           81 AIDRAKELFGADY----ANVQPHSGSQANFAVYTALLQPGDTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGIDESGKI  156 (420)
T ss_dssp             HHHHHHHHHTCSE----EECCCSSHHHHHHHHHHHHCCTTCEEEEEEEC------------CHHHHSEEEEEEECTTCSC
T ss_pred             HHHHHHHHhCCCC----ceeEecCcHHHHHHHHHHhcCCCCEEEecchhhcceeccchhhhhcccceeEEeccCCccCCc
Confidence            9999999999976    4577899999999988988654                                         


Q ss_pred             -----cc--c--cccEEEEcCcccccccChHHHHHHhhhcCCeEEEeccccccccc------------eeeeec------
Q psy10669        120 -----NN--A--RFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA------------GVKGVT------  172 (337)
Q Consensus       120 -----~~--a--~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~------------g~~~T~------  172 (337)
                           +.  .  +|++|++..++++...|+++|.++|+++|++|++|++|..|+..            .++++.      
T Consensus       157 d~~~l~~~i~~~~~~~v~~~~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~g  236 (420)
T 3gbx_A          157 DYDEMAKLAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTTTTHKTLAG  236 (420)
T ss_dssp             CHHHHHHHHHHHCCSEEEECCTTCCSCCCHHHHHHHHHHTTCEEEEECTTTHHHHHTTSSCCSTTTSSEEEEESSGGGCS
T ss_pred             CHHHHHHHHHhcCCeEEEEecCccCCccCHHHHHHHHHHcCCEEEEECCcchhceecccCCcccccCCEEEeecccCCCC
Confidence                 00  0  27899998788999999999999999999999999999988762            123332      


Q ss_pred             cCCchhhh-----hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCC
Q psy10669        173 KTGEKILY-----DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGG  247 (337)
Q Consensus       173 ~~Gg~i~~-----~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~  247 (337)
                      +.||++++     ++.+.++...+++.+++++++.+++++.++.+.....++++++++.++.++|.+.|.+.|+++..++
T Consensus       237 ~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~  316 (420)
T 3gbx_A          237 PRGGLILAKGGDEELYKKLNSAVFPSAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLNRGYKVVSGG  316 (420)
T ss_dssp             CSCEEEEESSCCHHHHHHHHHHHC----CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGS
T ss_pred             CCceEEEEcCCcHHHHHHhhhhcCCCCCCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhcCCeeccCC
Confidence            34788765     3667788878898899999999999999988876667789999999999999999999999998755


Q ss_pred             CCCeEEEEEecCCCcchHHHHHHHhhcCceeccC-------c-----ccchhhhhHhhhCCCHHHHHH------HHhhCC
Q psy10669        248 TDVHLILIDLRKNKLTGSKVELVLEEIAIACNKN-------T-----GISLAAEIQAISGPKLVDFQT------CLHKNE  309 (337)
Q Consensus       248 t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~-------~-----girig~~~~t~~G~~~~~~~~------~~~~~~  309 (337)
                      +.++++++++...+.+...+.+.|++.||.+.+.       .     ++||+.+..++++...+++..      .++.+.
T Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~~l~~~  396 (420)
T 3gbx_A          317 TENHLFLLDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRIGSPAVTRRGFKEAEVKELAGWMCDVLDNI  396 (420)
T ss_dssp             CSSSEEEEECGGGTCCHHHHHHHHHHTTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHTT
T ss_pred             CCCeEEEEEcCCCCCCHHHHHHHHHHCCcEeccccCCCCccccCCCcceEEecchhcccCCCHHHHHHHHHHHHHHHhCc
Confidence            7889999999877778889999999999999871       1     699999999888888666543      345555


Q ss_pred             CcHHHHHHHHHHHHHHHhcCCCCC
Q psy10669        310 DIVKKVAALKKEIEDYSNQFEMPG  333 (337)
Q Consensus       310 ~~~~~~~~lr~~V~~~~~~fp~p~  333 (337)
                      .+.+++++++++|.+|+++||+++
T Consensus       397 ~~~~~~~~~~~~~~~~~~~~~~~~  420 (420)
T 3gbx_A          397 NDEATIERVKAKVLDICARFPVYA  420 (420)
T ss_dssp             TCHHHHHHHHHHHHHHHHHSCSCC
T ss_pred             ccchhHHHHHHHHHHHHHhCCCCC
Confidence            667789999999999999999975

>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}

Probab=100.00  E-value=9.3e-33  Score=267.72  Aligned_cols=325  Identities=41%  Similarity=0.603  Sum_probs=254.3

Q ss_pred             chhhhhhhhhhcHHHHHHHHHHHhhcccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHH
Q psy10669          4 STMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQ   83 (337)
Q Consensus         4 ~~~~~~~l~~~d~~~~~~~~~e~~rq~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~   83 (337)
                      +.|+.+.+..++|++...+.++..++.+.++|++++|+++|.|++++...+.+.|+.|++++++|.|....+.++.++++
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~   85 (425)
T 3ecd_A            6 NPFFSQSLAERDASVRGAILKELERQQSQVELIASENIVSRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEALAIE   85 (425)
T ss_dssp             SHHHHCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGSSCTTC------------CCHHHHHHHH
T ss_pred             chHHHHHHHhhCHHHHHHHHHHHHHHhcceeeecccCCCCHHHHHHHhhhhhcccccCCCcchhcCCChHHHHHHHHHHH
Confidence            35677789999999999999999999999999999999999999999988778898999999999998877788888888


Q ss_pred             HHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc--------------------------------------------
Q psy10669         84 RSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT--------------------------------------------  119 (337)
Q Consensus        84 ~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~--------------------------------------------  119 (337)
                      ++++++|.+.    +.+.++||++||..++.+++++                                            
T Consensus        86 ~~~~~~~~~~----~~v~~~~Gs~a~~~al~~~~~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~  161 (425)
T 3ecd_A           86 RVKRLFNAGH----ANVQPHSGAQANGAVMLALAKPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSRDTMLIDY  161 (425)
T ss_dssp             HHHHHHTCSE----EECCCSSHHHHHHHHHHHHCCTTCEEEEECC------------------CEEEEECCCTTTSSCCH
T ss_pred             HHHHHhCCCC----ceeecCchHHHHHHHHHHccCCCCEEEEcccccccceecchhhhhcccceeeeecCCCcccCccCH
Confidence            9999999986    3466888899999888888653                                            


Q ss_pred             ---c--c--ccccEEEEcCcccccccChHHHHHHhhhcCCeEEEeccccccccc------------eeeeec------cC
Q psy10669        120 ---N--N--ARFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA------------GVKGVT------KT  174 (337)
Q Consensus       120 ---~--~--a~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~------------g~~~T~------~~  174 (337)
                         +  +  .+|++|+++..+++...|+++|.++|+++|++|++|++|..|+..            .++++.      +.
T Consensus       162 ~~l~~~i~~~~~~~v~~~~~~~~~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~~~di~~~s~sK~l~g~~  241 (425)
T 3ecd_A          162 DQVEALAQQHKPSLIIAGFSAYPRKLDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEHAHVVTSTTHKTLRGPR  241 (425)
T ss_dssp             HHHHHHHHHHCCSEEEEECSCCCSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSGGGCCCS
T ss_pred             HHHHHHHhhcCCcEEEEccccCCCcCCHHHHHHHHHHcCCEEEEECcChHhhhhcccccCchhcCcEEEecCCcccCCCC
Confidence               0  0  127889988678899999999999999999999999999887763            123332      35


Q ss_pred             Cchhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCe
Q psy10669        175 GEKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVH  251 (337)
Q Consensus       175 Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h  251 (337)
                      ||++++   ++.+.+....+++.+++++++.+++++.++.+.....++++++++.++.++|.+.|.+.|+++..+++.++
T Consensus       242 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~  321 (425)
T 3ecd_A          242 GGFVLTNDEEIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAGGVDLVTGGTDNH  321 (425)
T ss_dssp             CEEEEESCHHHHHHHHHHHC-----CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSS
T ss_pred             cEEEEeCCHHHHHHHHhhhCccccCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCce
Confidence            777765   37777887778888889999999999999888766677899999999999999999999999986557889


Q ss_pred             EEEEEecCCCcchHHHHHHHhhcCceec----cC--------cccchhhhhHhhhCCCHHHHHH------HHhhCC----
Q psy10669        252 LILIDLRKNKLTGSKVELVLEEIAIACN----KN--------TGISLAAEIQAISGPKLVDFQT------CLHKNE----  309 (337)
Q Consensus       252 ~v~V~~~~~~~~~~~~~~~L~~~gI~v~----~~--------~girig~~~~t~~G~~~~~~~~------~~~~~~----  309 (337)
                      ++++++...+.+...+.+.|++.||.+.    +.        .++|||....++++...+++.+      .+++..    
T Consensus       322 ~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~~l~~~~~~~  401 (425)
T 3ecd_A          322 LLLVDLRPKGLKGAQVEQALERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGRLILEVFEALRTNP  401 (425)
T ss_dssp             EEEEECGGGTCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHHHHHCT
T ss_pred             EEEEEeCCCCCCHHHHHHHHHHcCCEecccccCCCCCCCCCccceeccchhheeccCCHHHHHHHHHHHHHHHhcccccc
Confidence            9999998767788899999999999998    32        1699999888888887666543      233332    


Q ss_pred             -CcHHHHHHHHHHHHHHHhcCCCC
Q psy10669        310 -DIVKKVAALKKEIEDYSNQFEMP  332 (337)
Q Consensus       310 -~~~~~~~~lr~~V~~~~~~fp~p  332 (337)
                       .+.+.+++++++|.+||++||++
T Consensus       402 ~~~~~~~~~~~~~~~~~~~~~~~~  425 (425)
T 3ecd_A          402 EGDHATEQRVRREIFALCERFPIY  425 (425)
T ss_dssp             TCCHHHHHHHHHHHHHHHHTSCCC
T ss_pred             ccCchhHHHHHHHHHHHHhcCCCC
Confidence             33566899999999999999985

>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...

Probab=99.96  E-value=4.9e-28  Score=233.32  Aligned_cols=314  Identities=40%  Similarity=0.674  Sum_probs=251.6

Q ss_pred             hhhhhhcHHHHHHHHHHHhhcccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhh
Q psy10669          9 GTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKA   88 (337)
Q Consensus         9 ~~l~~~d~~~~~~~~~e~~rq~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~l   88 (337)
                      +.+..+||+++..+.++.+++.+.+.+++++|+++|.|++++...+.++|..|++++++|.|.....++|..+++.++++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~   81 (405)
T 2vi8_A            2 KYLPQQDPQVFAAIEQERKRQHAKIELIASENFVSRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQL   81 (405)
T ss_dssp             CSHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHH
T ss_pred             cchhhhCHHHHHHHHHHHHHhhcceeeccCcccCCHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHH
Confidence            45778999999999999999888999999999999999999998776678788999999998877889998889999999


Q ss_pred             cCCCCCCCcceeecCCCchhHHHHHHhhCCc---------------------------------------------cc--
Q psy10669         89 FNLDPEQWGCNVQPYSGSPANFAVCEKALPT---------------------------------------------NN--  121 (337)
Q Consensus        89 fg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~---------------------------------------------~~--  121 (337)
                      +|.++    ..+.++||+.|+..++.+++++                                             .+  
T Consensus        82 ~g~~~----~~i~~~sGt~a~~~a~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~  157 (405)
T 2vi8_A           82 FGAEH----ANVQPHSGAQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYDDVRE  157 (405)
T ss_dssp             HTCSE----EECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCTTTTCTTSHHHHHSEEEEECBCTTTCSBCHHHHHH
T ss_pred             hCCCc----eEEEecCcHHHHHHHHHHhcCCCCEEEEecccccchhcccchhhhccceeEEEecccccccCCcCHHHHHH
Confidence            99985    3466789999998888888643                                             00  


Q ss_pred             --c--cccEEEEcCcccccccChHHHHHHhhhcCCeEEEeccccccccc------------eeeeec------cCCchhh
Q psy10669        122 --A--RFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA------------GVKGVT------KTGEKIL  179 (337)
Q Consensus       122 --a--~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~------------g~~~T~------~~Gg~i~  179 (337)
                        .  +|++|+++++++++..|+++|.++|+++|++|++|++|+.|...            .++++.      +.||+++
T Consensus       158 ~i~~~~~~~v~~~~~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~~~g~~gG~~~  237 (405)
T 2vi8_A          158 KARLHRPKLIVAAAAAYPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPRGGMIL  237 (405)
T ss_dssp             HHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTCSEEEEESSSTTCCCSCEEEE
T ss_pred             HHHhcCCeEEEEeCCCCCccCCHHHHHHHHHHcCCEEEEEccccccccccCcCCCccccCCEEEEeccccCCCCCCeEEE
Confidence              0  26888888788999999999999999999999999999976543            122332      2467776


Q ss_pred             h--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEe
Q psy10669        180 Y--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDL  257 (337)
Q Consensus       180 ~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~  257 (337)
                      .  ++.+.+++...++..+++++..++++..++..+.....++.++++.++.++|.+.|.+.|+++....+.++++++++
T Consensus       238 ~~~~~~~~l~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~  317 (405)
T 2vi8_A          238 CQEQFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNEGFTLVSGGTDNHLLLVDL  317 (405)
T ss_dssp             ECHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEEC
T ss_pred             EcHHHHHHHHhhhcccccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCCceEEEEEc
Confidence            5  57777776666777888999999999888887655566889999999999999999999999876335688899998


Q ss_pred             cCCCcchHHHHHHHhhcCceeccC------------cccchhhhhHhhhCCCHHHHHH------HHhhCCCcHHHHHHHH
Q psy10669        258 RKNKLTGSKVELVLEEIAIACNKN------------TGISLAAEIQAISGPKLVDFQT------CLHKNEDIVKKVAALK  319 (337)
Q Consensus       258 ~~~~~~~~~~~~~L~~~gI~v~~~------------~girig~~~~t~~G~~~~~~~~------~~~~~~~~~~~~~~lr  319 (337)
                      ...+.+..++.+.|.+.||.+.+.            .++||+....+++..+.+++..      .++....+++++..+|
T Consensus       318 ~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~  397 (405)
T 2vi8_A          318 RPQQLTGKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLKNVGSEQALEEAR  397 (405)
T ss_dssp             GGGTCCHHHHHHHHHHHTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHTCTTCHHHHHHHH
T ss_pred             cCCCCCHHHHHHHHHHcCceeccCcCccccCCCCCCCceEEeeeeeeecCCCHHHHHHHHHHHHHHHhcccccccHHHHH
Confidence            765567788889998899998752            1699988776666777666543      2344434456688999


Q ss_pred             HHHHHHH
Q psy10669        320 KEIEDYS  326 (337)
Q Consensus       320 ~~V~~~~  326 (337)
                      ++|.+|+
T Consensus       398 ~~~~~~~  404 (405)
T 2vi8_A          398 QRVAALT  404 (405)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHhh
Confidence            9999987

>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}

Probab=99.95  E-value=1.9e-26  Score=222.31  Aligned_cols=313  Identities=40%  Similarity=0.639  Sum_probs=246.5

Q ss_pred             hhhcHHHHHHHHHHHhhcccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCC
Q psy10669         12 AQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNL   91 (337)
Q Consensus        12 ~~~d~~~~~~~~~e~~rq~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~   91 (337)
                      ...||++++.+.++..++...|.+.+++|+++|.|.+++...+.+.+..++++++++.|....+.+|..+++++++++|.
T Consensus         5 ~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g~   84 (407)
T 2dkj_A            5 LKRDEALFELIALEEKRQREGLELIASENFVSKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFGA   84 (407)
T ss_dssp             -CCCHHHHHHHHHHHHHHHTSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTC
T ss_pred             cccCHHHHHHHHHHHHHhhcceeeccCCCCCCHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHhCC
Confidence            56799999999999999999999999999999999999998766556778888888888877778898888999999999


Q ss_pred             CCCCCcceeecCCCchhHHHHHHhhCCc-----------------------------------------------c--cc
Q psy10669         92 DPEQWGCNVQPYSGSPANFAVCEKALPT-----------------------------------------------N--NA  122 (337)
Q Consensus        92 ~~~~~~~~v~~~Sgt~AN~~v~~aLl~~-----------------------------------------------~--~a  122 (337)
                      ++    ..+.++||+.|+..++.+++++                                               +  +.
T Consensus        85 ~~----~~i~~~sGt~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~  160 (407)
T 2dkj_A           85 AW----ANVQPHSGSQANMAVYMALMEPGDTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVRPDTELIDLEEVRRLAL  160 (407)
T ss_dssp             SE----EECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECCCTTTSSCCHHHHHHHHH
T ss_pred             Cc----ceEEecchHHHHHHHHHHhcCCCCEEEEecccccCccchHHHHHhcCceEEEEecCCCcccCccCHHHHHHHHh
Confidence            85    4577899999998888888643                                               0  00


Q ss_pred             --cccEEEEcCcccccccChHHHHHHhhhcCCeEEEeccccccccc------------eeeeec------cCCchhhh--
Q psy10669        123 --RFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA------------GVKGVT------KTGEKILY--  180 (337)
Q Consensus       123 --~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~------------g~~~T~------~~Gg~i~~--  180 (337)
                        ++++|++...++|+..|+++|.++|+++|+++++|++|+.|++.            .++++.      +.||+++.  
T Consensus       161 ~~~~~~v~~~~p~~~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~l~g~~~G~~~~~~  240 (407)
T 2dkj_A          161 EHRPKVIVAGASAYPRFWDFKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPLPYAHVVTSTTHKTLRGPRGGLILSND  240 (407)
T ss_dssp             HHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCTTTCSEEEEESSGGGCCCSCEEEEESC
T ss_pred             hcCCeEEEEeccccCCCCCHHHHHHHHHHcCCEEEEEccccccccccCccCCccccccEEEEeccccCCCCCceEEEECC
Confidence              26888886667899999999999999999999999999986643            122232      24677764  


Q ss_pred             -hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecC
Q psy10669        181 -DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRK  259 (337)
Q Consensus       181 -~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~  259 (337)
                       ++.+.+.....++..+++++..++++..++..+.....++.++++.++.++|.+.|.+.|+++....+..+++++.+..
T Consensus       241 ~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~  320 (407)
T 2dkj_A          241 PELGKRIDKLIFPGIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELARRGYRIVTGGTDNHLFLVDLRP  320 (407)
T ss_dssp             HHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGG
T ss_pred             HHHHHHHHhhhcccccCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhCCceeecCCCCceEEEEECcc
Confidence             3667777666677788899988888888888765556688999999999999999999999987533578899999876


Q ss_pred             CCcchHHHHHHHhhcCceeccC------------cccchhhhhHhhhCCCHHHHHH---H---HhhCCCcHHHHHHHHHH
Q psy10669        260 NKLTGSKVELVLEEIAIACNKN------------TGISLAAEIQAISGPKLVDFQT---C---LHKNEDIVKKVAALKKE  321 (337)
Q Consensus       260 ~~~~~~~~~~~L~~~gI~v~~~------------~girig~~~~t~~G~~~~~~~~---~---~~~~~~~~~~~~~lr~~  321 (337)
                      .+.+..++.+.|.+.||.+.+.            ..+||+....|..+.+.+++..   .   ++.. +   +.+.++++
T Consensus       321 ~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~-~---~~~~~~~~  396 (407)
T 2dkj_A          321 KGLTGKEAEERLDAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDRALLE-G---PSEALREE  396 (407)
T ss_dssp             GTCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCGGGHHHHHHHHHHHHHH-C---CCHHHHHH
T ss_pred             cCCCHHHHHHHHHHcCceecCCcCccccccccCCCceeeecccccccCCCHHHHHHHHHHHHHHHhc-C---chHHHHHH
Confidence            5557788889998899998752            1589987766655665454432   1   2222 1   13559999


Q ss_pred             HHHHHhcCCCC
Q psy10669        322 IEDYSNQFEMP  332 (337)
Q Consensus       322 V~~~~~~fp~p  332 (337)
                      |.+|.++||+|
T Consensus       397 ~~~~~~~~~~~  407 (407)
T 2dkj_A          397 VRRLALAHPMP  407 (407)
T ss_dssp             HHHHHHTSCCC
T ss_pred             HHHHHHhcCCC
Confidence            99999999985

>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*

Probab=99.75  E-value=3.7e-17  Score=159.74  Aligned_cols=235  Identities=14%  Similarity=0.166  Sum_probs=169.7

Q ss_pred             eeeccCCC----CCHHHHHHHhhhhhhccCCCCCCCcCcCcc-chHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchh
Q psy10669         34 ELIASENF----TSLAVLECLGSCLQNKYSEGLPGKRYYGGN-QFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPA  108 (337)
Q Consensus        34 ~l~asen~----~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~-~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~A  108 (337)
                      ..++++||    .+|.|.+++...+ .+|+.+++++++..|. ....+++    +.+++++|.+.     .+.++||+.|
T Consensus        67 id~~~~~~lg~~~~~~v~~a~~~~~-~~~~~~~~~~~~~~G~~~~~~~l~----~~la~~~g~~~-----~i~~~sGs~a  136 (427)
T 2w8t_A           67 ILLGTYNYMGMTFDPDVIAAGKEAL-EKFGSGTCGSRMLNGTFHDHMEVE----QALRDFYGTTG-----AIVFSTGYMA  136 (427)
T ss_dssp             EECSCCCTTCGGGCHHHHHHHHHHH-HHHCSCCCSCTTTTCCCHHHHHHH----HHHHHHHTCSE-----EEEESCHHHH
T ss_pred             EEEECcccccCCCCHHHHHHHHHHH-HHhCCCCcccccccCCcHHHHHHH----HHHHHHhCCCc-----eEEecCcHHH
Confidence            35667776    4799999998765 4566778888888886 4445666    57889999874     6889999999


Q ss_pred             HHHHHHhhCCc------------------------------------c--c-c----cccEEEEcCcc--cccccChHHH
Q psy10669        109 NFAVCEKALPT------------------------------------N--N-A----RFDFLSSGTTC--YSRCLDYARF  143 (337)
Q Consensus       109 N~~v~~aLl~~------------------------------------~--~-a----~pklII~~~S~--~~~~~d~~~l  143 (337)
                      |..++.+++++                                    +  + .    ++++|++....  .+...|+++|
T Consensus       137 ~~~al~~l~~~gd~vl~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~v~~~~~~n~tG~~~~l~~l  216 (427)
T 2w8t_A          137 NLGIISTLAGKGEYVILDADSHASIYDGCQQGNAEIVRFRHNSVEDLDKRLGRLPKEPAKLVVLEGVYSMLGDIAPLKEM  216 (427)
T ss_dssp             HHHHHHHHSCTTCEEEEETTCCHHHHHHHHHSCSEEEEECTTCHHHHHHHHHTSCSSSCEEEEEESEETTTTEECCHHHH
T ss_pred             HHHHHHHhcCCCCEEEECCcccHHHHHHHHHcCCeeEEeCCCCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccCHHHH
Confidence            99999998764                                    0  0 1    35778876322  2466788899


Q ss_pred             HHHhhhcCCeEEEeccccccccc--------------e---eeeecc-----CCchhhh--hHHHHHhhccCCCC-CCCC
Q psy10669        144 RQICDETDSIMFADMSHISGLIA--------------G---VKGVTK-----TGEKILY--DYEEKINNAVFPSL-QGGP  198 (337)
Q Consensus       144 ~eia~~~ga~l~vD~AH~~Gli~--------------g---~~~T~~-----~Gg~i~~--~l~~~i~~~~~p~~-~g~~  198 (337)
                      .++|+++|++|++|++|+.|.++              .   +++|.+     .||++++  ++.+.+.+...|.. .+++
T Consensus       217 ~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~~g~~gG~v~~~~~l~~~l~~~~~~~~~~~~~  296 (427)
T 2w8t_A          217 VAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSVGTVGGFVVSNHPKFEAVRLACRPYIFTASL  296 (427)
T ss_dssp             HHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSCCEEEEECCTTGGGGGGTCHHHHSSCCC
T ss_pred             HHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecchhhhccCCCEEEeCHHHHHHHHHhcccccccCCC
Confidence            99999999999999999988764              1   134432     3787765  45555543322222 3567


Q ss_pred             cHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCcee
Q psy10669        199 HNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIAC  278 (337)
Q Consensus       199 ~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v  278 (337)
                      ++..++++..++..+.  +.++.++++.++.++|.+.|.+.|+++......++++++.+... .+..++.+.|.+.||.+
T Consensus       297 ~~~~~aa~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~L~~~Gi~v  373 (427)
T 2w8t_A          297 PPSVVATATTSIRKLM--TAHEKRERLWSNARALHGGLKAMGFRLGTETCDSAIVAVMLEDQ-EQAAMMWQALLDGGLYV  373 (427)
T ss_dssp             CHHHHHHHHHHHHHHT--SCHHHHHHHHHHHHHHHHHHHHHTCEESCSSCCSSEEEEEESSH-HHHHHHHHHHHHTTEEC
T ss_pred             CHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCCCEEEEEECCH-HHHHHHHHHHHHCCeEE
Confidence            7777777777777653  35788999999999999999999998873211567888888642 35667778888779998


Q ss_pred             ccC
Q psy10669        279 NKN  281 (337)
Q Consensus       279 ~~~  281 (337)
                      .+.
T Consensus       374 ~~~  376 (427)
T 2w8t_A          374 NMA  376 (427)
T ss_dssp             EEE
T ss_pred             eee
Confidence            763

>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A

Probab=99.72  E-value=1.3e-16  Score=154.30  Aligned_cols=232  Identities=14%  Similarity=0.116  Sum_probs=166.7

Q ss_pred             eeeeccCCCC----CHHHHHHHhhhhhhccCCCCCCCcCcCccchH-HHHHHHHHHHHHhhcCCCCCCCcceeecCCCch
Q psy10669         33 IELIASENFT----SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFI-DEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSP  107 (337)
Q Consensus        33 i~l~asen~~----~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~-~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~  107 (337)
                      +.-++|+||+    +|.+.+++... ..+|+.++.+.+.+.|.... .+++    +++++++|.++     .+.++||+.
T Consensus        61 ~ld~~s~~~l~~~~~p~v~~a~~~~-l~~~~~~~~~~~~~~g~~~~~~~l~----~~la~~~g~~~-----~i~~~sGt~  130 (409)
T 3kki_A           61 DIILQSNDYLALANHPLIKARLAKS-LLEEQQSLFMSASFLQNDYDKPMIE----KRLAKFTGFDE-----CLLSQSGWN  130 (409)
T ss_dssp             SEECCCSCTTCCTTCHHHHHHHHHH-HHSCCCCCCSBGGGGCSTTTSCHHH----HHHHHHHTCSE-----EEEESCHHH
T ss_pred             eEEeeccCccCCcCCHHHHHHHHHH-HHHcCCCCCccccccCCcHHHHHHH----HHHHHHhCCCe-----EEEecchHH
Confidence            4446788886    89999999876 45777777777777776433 5666    57789999885     688899999


Q ss_pred             hHHHHHHhhCCc------------------------------------c--cc--cccEEEEcCccc--ccccChHHHHH
Q psy10669        108 ANFAVCEKALPT------------------------------------N--NA--RFDFLSSGTTCY--SRCLDYARFRQ  145 (337)
Q Consensus       108 AN~~v~~aLl~~------------------------------------~--~a--~pklII~~~S~~--~~~~d~~~l~e  145 (337)
                      ||..++.+++++                                    +  +.  ++++|++..-.+  +...|+++|.+
T Consensus       131 a~~~~l~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~vi~~~~~nptG~~~~l~~l~~  210 (409)
T 3kki_A          131 ANVGLLQTICQPNTNVYIDFFAHMSLWEGARYANAQAHPFMHNNCDHLRMLIQRHGPGIIVVDSIYSTLGTIAPLAELVN  210 (409)
T ss_dssp             HHHHHHHHHCCTTCEEEEETTSCHHHHHHHHHTTCEEEEECTTCHHHHHHHHHHHCSCEEEEESBCTTTCCBCCHHHHHH
T ss_pred             HHHHHHHHhcCCCCEEEECCCcCHHHHHHHHHcCCeEEEecCCCHHHHHHHHHhcCCeEEEECCCCCCCCCcCCHHHHHH
Confidence            999999999765                                    1  01  268888874332  57888999999


Q ss_pred             HhhhcCCeEEEeccccccccc-----------------eeeeec-c----CCchhhh--hHHHHHhhccCCCC-CCCCcH
Q psy10669        146 ICDETDSIMFADMSHISGLIA-----------------GVKGVT-K----TGEKILY--DYEEKINNAVFPSL-QGGPHN  200 (337)
Q Consensus       146 ia~~~ga~l~vD~AH~~Gli~-----------------g~~~T~-~----~Gg~i~~--~l~~~i~~~~~p~~-~g~~~~  200 (337)
                      +|+++|++|++|++|+.|.++                 .+++|. |    .||++++  ++.+.+.....+.. .+++++
T Consensus       211 la~~~~~~li~De~~~~g~~g~~g~~~~~~~~~~~~~di~~~s~sK~~~~~gg~v~~~~~~~~~~~~~~~~~~~~~~~~~  290 (409)
T 3kki_A          211 ISKEFGCALLVDESHSLGTHGPNGAGLLAELGLTREVHFMTASLAKTFAYRAGAIWCNNEVNRCVPFISYPAIFSSTLLP  290 (409)
T ss_dssp             HHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSCEEEEESSSGGGTHHHHCHHHHHSBCCCH
T ss_pred             HHHHcCCEEEEECCccccccCCCCCcchhhcCCCCCCCEEEeecchhhCCCceEEEECHHHHHHHHHhCcCccccCCCcH
Confidence            999999999999999987764                 112333 2    2677765  34443333222222 234566


Q ss_pred             HHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceecc
Q psy10669        201 HAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNK  280 (337)
Q Consensus       201 ~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~  280 (337)
                      ..++++..++..+.  +.+++++++.++.++|.+.|.+.|+++.   +..+++++.+.... +..++.+.|.+.||.+.+
T Consensus       291 ~~~aa~~aal~~~~--~~~~~~~~~~~~~~~l~~~L~~~g~~~~---~~~~~~~~~~~~~~-~~~~~~~~L~~~Gv~v~~  364 (409)
T 3kki_A          291 YEAAGLETTLEIIE--SADNRRQHLDRMARKLRIGLSQLGLTIR---SESQIIGLETGDER-NTEKVRDYLESNGVFGSV  364 (409)
T ss_dssp             HHHHHHHHHHHHHH--HCHHHHHHHHHHHHHHHHHHHTTTCCCC---CSSSEEEEEEESHH-HHHHHHHHHHHTTEECEE
T ss_pred             HHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHcCCccC---CCCCEEEEEeCCHH-HHHHHHHHHHHCCceEee
Confidence            67777777776653  3478899999999999999999999876   36778888886533 456677778877999853

>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}

Probab=99.71  E-value=5.9e-16  Score=148.18  Aligned_cols=234  Identities=18%  Similarity=0.209  Sum_probs=170.8

Q ss_pred             eeeeccCCCC----CHHHHHHHhhhhhhccCCCCCCCcCcCccchH-HHHHHHHHHHHHhhcCCCCCCCcceeecCCCch
Q psy10669         33 IELIASENFT----SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFI-DEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSP  107 (337)
Q Consensus        33 i~l~asen~~----~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~-~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~  107 (337)
                      +.-++++|++    +|.+.+++...+. +|+.+++++++..|.... .+++    +.+++++|.+.     .+.++||++
T Consensus        45 ~id~~~~~~~g~~~~~~v~~a~~~~~~-~~~~~~~~~~~~~g~~~~~~~l~----~~la~~~~~~~-----~i~~~sGt~  114 (399)
T 3tqx_A           45 VLNFCANNYLGLADHPALIKTAQTVVE-QYGFGMASVRFICGTQTIHKELE----KDISEFLGTDD-----TILYSSCFD  114 (399)
T ss_dssp             EEECSSCCTTSCTTCHHHHHHHHHHHH-HHCSCCCSCCCCCCCBHHHHHHH----HHHHHHHTCSE-----EEEESCHHH
T ss_pred             EEEeeccCcccccCCHHHHHHHHHHHH-HhCCCCCCcCccccCchHHHHHH----HHHHHHHCCCc-----EEEECchHH
Confidence            4455566775    5999999987654 577778888888776443 5565    68889999874     688999999


Q ss_pred             hHHHHHHhhCCc------------------------------------c--c-c------cccEEEEcCcc--cccccCh
Q psy10669        108 ANFAVCEKALPT------------------------------------N--N-A------RFDFLSSGTTC--YSRCLDY  140 (337)
Q Consensus       108 AN~~v~~aLl~~------------------------------------~--~-a------~pklII~~~S~--~~~~~d~  140 (337)
                      ||..++.+++++                                    +  + .      ++++|++..-.  .+...|+
T Consensus       115 a~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~l  194 (399)
T 3tqx_A          115 ANGGLFETLLGPEDAIISDELNHASIIDGIRLCKAQRYRYKNNAMGDLEAKLKEADEKGARFKLIATDGVFSMDGIIADL  194 (399)
T ss_dssp             HHHTTHHHHCCTTCEEEEETTCCHHHHHHHHSCCSEEEEECTTCTTHHHHHHHHHHTTTCSSEEEEEESEETTTTEECCH
T ss_pred             HHHHHHHHhcCCCCEEEECCcccHHHHHHHHHcCCceeEeCCCCHHHHHHHHHhhhccCCCceEEEEeCCCCCCCCcCCH
Confidence            999888888764                                    0  0 0      36688876432  3567889


Q ss_pred             HHHHHHhhhcCCeEEEeccccccccc-----------------eeeeec------cCCchhhh--hHHHHHhhccCCC-C
Q psy10669        141 ARFRQICDETDSIMFADMSHISGLIA-----------------GVKGVT------KTGEKILY--DYEEKINNAVFPS-L  194 (337)
Q Consensus       141 ~~l~eia~~~ga~l~vD~AH~~Gli~-----------------g~~~T~------~~Gg~i~~--~l~~~i~~~~~p~-~  194 (337)
                      ++|.++|+++|+++++|++|..|+++                 .++++.      ..||+++.  ++.+.+.....+. .
T Consensus       195 ~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~gG~~~~~~~~~~~~~~~~~~~~~  274 (399)
T 3tqx_A          195 KSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALGGASGGYTSGHKEIIEWLRNRSRPYLF  274 (399)
T ss_dssp             HHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSCSSCCEEEEECHHHHHHHHHHCHHHHS
T ss_pred             HHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecchHhcccCceEEEEcCHHHHHHHHHhCcceec
Confidence            99999999999999999999877654                 122232      24677765  4656555432222 2


Q ss_pred             CCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhc
Q psy10669        195 QGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEI  274 (337)
Q Consensus       195 ~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~  274 (337)
                      .+++++..++++..++.... ...++.++++.++.++|.+.|.+.|+++..  .+.+++++.+... .+..++.+.|.+.
T Consensus       275 ~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~--~~~~~~~~~~~~~-~~~~~~~~~l~~~  350 (399)
T 3tqx_A          275 SNTVAPVIVATSLKVLELLK-TEGPQLRKQLQENSRYFRAGMEKLGFQLVP--GNHPIIPVMLGDA-QLATNMADHLLQE  350 (399)
T ss_dssp             SCCCCHHHHHHHHHHHHHHH-HTHHHHHHHHHHHHHHHHHHHHHHTCCBCC--CSSSEEEEEEECH-HHHHHHHHHHHHT
T ss_pred             cCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHcCCCcCC--CCCCEEEEEeCCH-HHHHHHHHHHHHC
Confidence            45677777778777777653 346789999999999999999999998874  6677888887643 2567788888888


Q ss_pred             Cceecc
Q psy10669        275 AIACNK  280 (337)
Q Consensus       275 gI~v~~  280 (337)
                      ||.+.+
T Consensus       351 gi~v~~  356 (399)
T 3tqx_A          351 GIYVVG  356 (399)
T ss_dssp             TEECCE
T ss_pred             CCEEee
Confidence            999874

>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}

Probab=99.70  E-value=9.2e-17  Score=158.28  Aligned_cols=238  Identities=14%  Similarity=0.067  Sum_probs=161.7

Q ss_pred             hhcHHHH---HHHHHHHhhcccceeeeccCCCCCHHHHHHHhhhhhhcc----CCCCCCCcCcCccchHHHHHHHHHHHH
Q psy10669         13 QTDPELY---SLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKY----SEGLPGKRYYGGNQFIDEIEIVAQQRS   85 (337)
Q Consensus        13 ~~d~~~~---~~~~~e~~rq~~~i~l~asen~~~p~V~~a~~~~l~~~y----~~g~~g~r~~~G~~~~~~lE~~~~~~~   85 (337)
                      ..|+++.   +-+++|.+||...+.+++++|+  +.|++++.+.....+    .+|++..|.     ..+++|    +++
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~n~--~~Vl~a~~~~~~~~~~~~~~~gy~Y~~~-----g~~~Le----~~l   83 (427)
T 3hvy_A           15 NINERVLELYERALNDVEKEFKYYDEIREYNQ--LKVLKAFQEERISESHFTNSSGYGYNDI-----GRDSLD----RVY   83 (427)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHTTCCGGGSCCCCTTCTTCH-----HHHHHH----HHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhH--HHHHHHHHHHHHHHHhcccCcCCCCCch-----hHHHHH----HHH
Confidence            4578888   5567889999999999999998  899999988544332    223333332     256777    588


Q ss_pred             HhhcCCCCCCCcceee--cCCCchhHHHHHHhhCCc-------c------------------------------------
Q psy10669         86 LKAFNLDPEQWGCNVQ--PYSGSPANFAVCEKALPT-------N------------------------------------  120 (337)
Q Consensus        86 a~lfg~~~~~~~~~v~--~~Sgt~AN~~v~~aLl~~-------~------------------------------------  120 (337)
                      +++||+++    +.++  ++||++||.+++.+++++       .                                    
T Consensus        84 A~l~g~e~----alv~p~~~sGt~A~~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~~  159 (427)
T 3hvy_A           84 ANIFNTES----AFVRPHFVNGTHAIGAALFGNLRPNDTMMSICGMPYDTLHDIIGMDDSKKVGSLREYGVKYKMVDLKD  159 (427)
T ss_dssp             HHHHTCSE----EEEETTCCSHHHHHHHHHHHTCCTTCEEEECSSSCCGGGHHHHTCCTTCCSCCTGGGTCEEEECCCBT
T ss_pred             HHHhCCCc----eEEeCCCCcHHHHHHHHHHHhcCCCCEEEEeCCCCchhHHHHhccccchhhhHHHHcCCEEEEecCCC
Confidence            99999987    3444  789999999999988643       0                                    


Q ss_pred             -----------c---ccccEEEEcCc----ccc--cccChHHHHHHhhh--cCCeEEEeccccccccc---------eee
Q psy10669        121 -----------N---ARFDFLSSGTT----CYS--RCLDYARFRQICDE--TDSIMFADMSHISGLIA---------GVK  169 (337)
Q Consensus       121 -----------~---a~pklII~~~S----~~~--~~~d~~~l~eia~~--~ga~l~vD~AH~~Gli~---------g~~  169 (337)
                                 +   .+||+|+++.|    .++  ...|+++|.++|++  +|++++||++|..|+..         .++
T Consensus       160 ~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~~~~~g~~livD~a~~~~~~~~~p~~~gaDiv~  239 (427)
T 3hvy_A          160 GKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIREVNENVIVFVDNCYGEFVEEKEPTDVGADIIA  239 (427)
T ss_dssp             TBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCCCHHHHHHHHHHHHHHCSSSEEEEECTTCTTTSSSCGGGGTCSEEE
T ss_pred             CCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCccccHHHHHHHHHHHHHhCCCCEEEEECCccccccCCCCcccCCeEEE
Confidence                       0   12578888763    222  44677888899999  89999999999998843         234


Q ss_pred             eecc---------CCchhhh--hHHHHHhhc-cCCCCC--CCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHH
Q psy10669        170 GVTK---------TGEKILY--DYEEKINNA-VFPSLQ--GGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDE  235 (337)
Q Consensus       170 ~T~~---------~Gg~i~~--~l~~~i~~~-~~p~~~--g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~  235 (337)
                      +|.+         .||+|++  ++.+++... ..|++.  .++.+. .+.++  +..+  ...+.++++..+|++++++.
T Consensus       240 ~S~sK~lgg~g~~~GG~i~~~~~li~~l~~~~~~~~~g~~~~~~~~-~a~~~--~~gl--~~~~~r~~~~~~~a~~la~~  314 (427)
T 3hvy_A          240 GSLIKNIGGGIATTGGYIAGKEEYVTQATFRVTVPGIGGECGSTFG-VMRSL--YEGL--FMAPHVTIEAVKGAVFCARI  314 (427)
T ss_dssp             EETTSGGGTTTCCSCEEEEECHHHHHHHHHHHSCTTTGGGCCCCTT-CHHHH--HHHH--HHHHHHHHHHHHHHHHHHHH
T ss_pred             ECCcccccccccceEEEEEECHHHHHHHHHHhhcCCcccccCCCHH-HHHHH--HHhH--hHHHHHHHHHHHHHHHHHHH
Confidence            4432         3678776  577766653 345542  223222 12111  2222  12357899999999999999


Q ss_pred             HHhCCCEEecCCCCCe-----EEEEEecCCCcchHHHHHHHhh
Q psy10669        236 MIKRGYHVVTGGTDVH-----LILIDLRKNKLTGSKVELVLEE  273 (337)
Q Consensus       236 L~~~G~~v~~~~t~~h-----~v~V~~~~~~~~~~~~~~~L~~  273 (337)
                      |.+.|++|+.  +.+|     ++++.+++.. ....+.+.|..
T Consensus       315 L~~~g~~V~p--~~~~~~~~li~~~~l~~~~-~~~~f~~~l~~  354 (427)
T 3hvy_A          315 MELAGFDVLP--KYNDKRTDIIQAIKFNDEK-KLIDFIKGIQT  354 (427)
T ss_dssp             HHHTTCEEES--CTTSCCSSSEEEEECSSHH-HHHHHHHHHHH
T ss_pred             HHhCCCeecC--CCCCCCceEEEEEeCCCHH-HHHHHHHHhcc
Confidence            9999999965  3666     8888886432 34455555554

>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4

Probab=99.65  E-value=4.2e-15  Score=142.88  Aligned_cols=234  Identities=15%  Similarity=0.195  Sum_probs=167.7

Q ss_pred             eeeeccCCCC----CHHHHHHHhhhhhhccCCCCCCCcCcCcc-chHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCch
Q psy10669         33 IELIASENFT----SLAVLECLGSCLQNKYSEGLPGKRYYGGN-QFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSP  107 (337)
Q Consensus        33 i~l~asen~~----~p~V~~a~~~~l~~~y~~g~~g~r~~~G~-~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~  107 (337)
                      +.-++++|++    +|.|.+++...+ ++|+.++.++++..|. ....+++    +.+++++|.+.     .+.++||+.
T Consensus        47 ~id~~~~~~~g~~~~~~v~~a~~~~~-~~~~~~~~~~~~~~g~~~~~~~l~----~~la~~~g~~~-----~i~~~sGs~  116 (401)
T 1fc4_A           47 VINFCANNYLGLANHPDLIAAAKAGM-DSHGFGMASVRFICGTQDSHKELE----QKLAAFLGMED-----AILYSSCFD  116 (401)
T ss_dssp             EEECCCSCTTSCTTCHHHHHHHHHHH-HHHCSCCCSCHHHHCCBHHHHHHH----HHHHHHHTCSE-----EEEESCHHH
T ss_pred             EEEeeccCcccccCCHHHHHHHHHHH-HHhCCCCCCCCcccCCcHHHHHHH----HHHHHHhCCCc-----EEEeCChHH
Confidence            4345555766    799999998764 4666666666766554 3334554    68889999873     688899999


Q ss_pred             hHHHHHHhhCCc------------------------------------c--cc-------cccEEEEcCc--ccccccCh
Q psy10669        108 ANFAVCEKALPT------------------------------------N--NA-------RFDFLSSGTT--CYSRCLDY  140 (337)
Q Consensus       108 AN~~v~~aLl~~------------------------------------~--~a-------~pklII~~~S--~~~~~~d~  140 (337)
                      |+..++.+++++                                    +  +.       ++++|++..-  ..+...|+
T Consensus       117 a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~~  196 (401)
T 1fc4_A          117 ANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYANNDMQELEARLKEAREAGARHVLIATDGVFSMDGVIANL  196 (401)
T ss_dssp             HHHTTHHHHCCTTCEEEEETTCCHHHHHHHHTSCSEEEEECTTCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECCH
T ss_pred             HHHHHHHHHcCCCCEEEEcchhHHHHHHHHHHcCCceEEECCCCHHHHHHHHHHhhccCCCceEEEEeCCcCCCCCCCCH
Confidence            998888888754                                    0  01       3567777532  24678889


Q ss_pred             HHHHHHhhhcCCeEEEeccccccccc-----------------eeeeec-c-----CCchhhh--hHHHHHhhccCCC-C
Q psy10669        141 ARFRQICDETDSIMFADMSHISGLIA-----------------GVKGVT-K-----TGEKILY--DYEEKINNAVFPS-L  194 (337)
Q Consensus       141 ~~l~eia~~~ga~l~vD~AH~~Gli~-----------------g~~~T~-~-----~Gg~i~~--~l~~~i~~~~~p~-~  194 (337)
                      ++|.++|+++|+++++|++|..|++.                 .+++|. |     .||+++.  ++.+.+.....|. .
T Consensus       197 ~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~di~~~s~sK~~~~~~gG~~~~~~~~~~~l~~~~~~~~~  276 (401)
T 1fc4_A          197 KGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKALGGASGGYTAARKEVVEWLRQRSRPYLF  276 (401)
T ss_dssp             HHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSSSCEEEEECHHHHHHHHHHCHHHHH
T ss_pred             HHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCcCCcEEEecchhhccCCCCEEEEcCHHHHHHHHHhCcCcee
Confidence            99999999999999999999877752                 122233 2     3677765  5666665432222 1


Q ss_pred             CCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhc
Q psy10669        195 QGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEI  274 (337)
Q Consensus       195 ~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~  274 (337)
                      .+++++...+++..++..+.  +.++.++++.++.++|.+.|.+.|+++..  +..+++++.+.. +.+..++.+.|.+.
T Consensus       277 ~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~l~~~L~~~g~~~~~--~~~~~~~~~~~~-~~~~~~l~~~l~~~  351 (401)
T 1fc4_A          277 SNSLAPAIVAASIKVLEMVE--AGSELRDRLWANARQFREQMSAAGFTLAG--ADHAIIPVMLGD-AVVAQKFARELQKE  351 (401)
T ss_dssp             SCCCCHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHHHHTTCCBCC--SSSSEEEEEEEC-HHHHHHHHHHHHHT
T ss_pred             CCCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHcCCcccC--CCCCEEEEEcCC-hHHHHHHHHHHHHC
Confidence            44677888888888877763  25788999999999999999999998874  677888888853 23567778888888


Q ss_pred             CceeccC
Q psy10669        275 AIACNKN  281 (337)
Q Consensus       275 gI~v~~~  281 (337)
                      ||.+.+.
T Consensus       352 gi~v~~~  358 (401)
T 1fc4_A          352 GIYVTGF  358 (401)
T ss_dssp             TEECCEE
T ss_pred             CcEEeee
Confidence            9998753

>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*

Probab=99.62  E-value=1.6e-14  Score=138.04  Aligned_cols=236  Identities=11%  Similarity=0.095  Sum_probs=164.3

Q ss_pred             ceeeeccCC---CCCHHHHHHHhhhhhhccCCCCCCCcCcCcc-chHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCch
Q psy10669         32 GIELIASEN---FTSLAVLECLGSCLQNKYSEGLPGKRYYGGN-QFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSP  107 (337)
Q Consensus        32 ~i~l~asen---~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~-~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~  107 (337)
                      .|.+.+.+|   ..+|.+++++...+. +++.+++++++..|. ....+++    +.+++++|.+.     .+.++||+.
T Consensus        41 ~id~~~~~~~~~~~~~~v~~a~~~~~~-~~~~~~~~~~~~~g~~~~~~~l~----~~la~~~g~~~-----~i~~~sGt~  110 (384)
T 1bs0_A           41 YLNFSSNDYLGLSHHPQIIRAWQQGAE-QFGIGSGGSGHVSGYSVVHQALE----EELAEWLGYSR-----ALLFISGFA  110 (384)
T ss_dssp             EEECSCCCTTSGGGCHHHHHHHHHHHH-HHCSCCCSBTTTTCCCHHHHHHH----HHHHHHHTCSE-----EEEESCHHH
T ss_pred             EEEeeccCccCCCCCHHHHHHHHHHHH-HhCCCCCCcCcccCChHHHHHHH----HHHHHHhCCCc-----EEEeCCcHH
Confidence            455555554   368999999987654 455556666665454 3334444    68889999863     688899999


Q ss_pred             hHHHHHHhhCCc------------------------------------c--ccc----ccEEEEcCcc--cccccChHHH
Q psy10669        108 ANFAVCEKALPT------------------------------------N--NAR----FDFLSSGTTC--YSRCLDYARF  143 (337)
Q Consensus       108 AN~~v~~aLl~~------------------------------------~--~a~----pklII~~~S~--~~~~~d~~~l  143 (337)
                      |+..++.+++++                                    +  +.+    +++|++....  .+...|+++|
T Consensus       111 a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~~~nptG~~~~l~~i  190 (384)
T 1bs0_A          111 ANQAVIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAHNDVTHLARLLASPCPGQQMVVTEGVFSMDGDSAPLAEI  190 (384)
T ss_dssp             HHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTSSSEEEEECTTCHHHHHHHHHSCCSSCEEEEEESBCTTTCCBCCHHHH
T ss_pred             HHHHHHHHhCCCCcEEEEcccccHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHhcCCCCeEEEEeCCCCCCCCccCHHHH
Confidence            988888988764                                    0  011    3566654222  4688899999


Q ss_pred             HHHhhhcCCeEEEeccccccccc---------------eeeeec-c----CCchhhh--hHHHHHhhccCCCCC-CCCcH
Q psy10669        144 RQICDETDSIMFADMSHISGLIA---------------GVKGVT-K----TGEKILY--DYEEKINNAVFPSLQ-GGPHN  200 (337)
Q Consensus       144 ~eia~~~ga~l~vD~AH~~Gli~---------------g~~~T~-~----~Gg~i~~--~l~~~i~~~~~p~~~-g~~~~  200 (337)
                      .++|+++|+++++|++|..|.++               .+++|. |    .||+++.  ++.+.+.....+... +++++
T Consensus       191 ~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~GG~~~~~~~~~~~l~~~~~~~~~~~~~~~  270 (384)
T 1bs0_A          191 QQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGFGVSGAAVLCSSTVADYLLQFARHLIYSTSMPP  270 (384)
T ss_dssp             HHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTCCCSEEEEESSSTTSSCCEEEEECHHHHHHHHHHCHHHHSSBCCCH
T ss_pred             HHHHHHcCcEEEEECCcccceecCCCCchHHhcCCCCcEEEeeccchhhccCcEEEeCHHHHHHHHHhchhhhcCCCCCH
Confidence            99999999999999999887642               123333 2    4788765  466655543212222 25777


Q ss_pred             HHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceecc
Q psy10669        201 HAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNK  280 (337)
Q Consensus       201 ~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~  280 (337)
                      ...+++..++..+.+...+++++++.++.++|.+.|.+.|+++..  ..++++++.+.. +.+..++.+.|.+.||.+.+
T Consensus       271 ~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~--~~~~~~~~~~~~-~~~~~~l~~~l~~~gi~v~~  347 (384)
T 1bs0_A          271 AQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLPFTLAD--SCSAIQPLIVGD-NSRALQLAEKLRQQGCWVTA  347 (384)
T ss_dssp             HHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTSSCEECS--CCSSBCCEEEES-HHHHHHHHHHHHHTTEECCE
T ss_pred             HHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhcCCcccC--CCCCEEEEEeCC-HHHHHHHHHHHHHCCcEEEe
Confidence            777777777776642245688999999999999999999998864  566777787753 33567788888878999875

>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*

Probab=99.61  E-value=3.2e-15  Score=147.29  Aligned_cols=244  Identities=16%  Similarity=0.074  Sum_probs=159.3

Q ss_pred             hhcHHHHHHHHHHHhhcccceeeeccCCCCCHHHHHHHhhhhh-hccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCC
Q psy10669         13 QTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQ-NKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNL   91 (337)
Q Consensus        13 ~~d~~~~~~~~~e~~rq~~~i~l~asen~~~p~V~~a~~~~l~-~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~   91 (337)
                      +...++++-+++|..+|...+..++++|.  +.|++++..... ..+..+  ...|.-+-...+++|    ++++++||+
T Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~a~~n~--~~Vl~A~~~~~~~~~~~~~--~~gy~y~~~~~~~Le----~~lA~l~g~   88 (427)
T 3i16_A           17 DRVLKLYETAMNDIQNQFKILDDIREFNQ--LKVLNAFQEERISEAHFTN--SSGYGYGDIGRDSLD----AVYARVFNT   88 (427)
T ss_dssp             HHHHHHHHHHHHHTHHHHHHHHHHHHHHH--HHHHHHHHHTTCCGGGSCC--CCTTCTTCHHHHHHH----HHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhCH--HHHHHHHHHhchhHHhcCC--CCCCCCCHHHHHHHH----HHHHHHhCC
Confidence            44566777788899999999999999998  889999975321 111111  111111222356777    588999999


Q ss_pred             CCCCCcceee--cCCCchhHHHHHHhhCCc-------c------------------------------------------
Q psy10669         92 DPEQWGCNVQ--PYSGSPANFAVCEKALPT-------N------------------------------------------  120 (337)
Q Consensus        92 ~~~~~~~~v~--~~Sgt~AN~~v~~aLl~~-------~------------------------------------------  120 (337)
                      ++    +.++  ++||++||..++.+++++       .                                          
T Consensus        89 e~----alv~p~~~sGt~Ai~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~~~g~~D~  164 (427)
T 3i16_A           89 ES----ALVRPHFVNGTHALGAALFGNLRPGNTMLSVCGEPYDTLHDVIGITENSNMGSLKEFGINYKQVDLKEDGKPNL  164 (427)
T ss_dssp             SE----EEEETTCCSHHHHHHHHHHHHCCTTCEEEESSSSCCGGGHHHHTCSCCCSSCCTGGGTCEEEECCCCTTSSCCH
T ss_pred             cc----eEEeCCCccHHHHHHHHHHHHhCCCCEEEEeCCCccHHHHHHHhccccchHHHHHHcCCEEEEecCccCCCcCH
Confidence            86    3344  789999999999887533       0                                          


Q ss_pred             ------c---ccccEEEEcCc---ccc---cccChHHHHHHhhh--cCCeEEEeccccccccc---------eeeeecc-
Q psy10669        121 ------N---ARFDFLSSGTT---CYS---RCLDYARFRQICDE--TDSIMFADMSHISGLIA---------GVKGVTK-  173 (337)
Q Consensus       121 ------~---a~pklII~~~S---~~~---~~~d~~~l~eia~~--~ga~l~vD~AH~~Gli~---------g~~~T~~-  173 (337)
                            +   .+||+|++..|   .+.   ...|+++|.++|++  +|++++||++|..|+..         .+++|.+ 
T Consensus       165 e~l~~~l~~~~~tklV~i~~s~~~p~nptg~i~dl~~i~~la~~~~~g~~livD~a~~~~~~~~~p~~~gaDiv~~S~sK  244 (427)
T 3i16_A          165 EEIEKVLKEDESITLVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRKDIICFVDNCYGEFMDTKEPTDVGADLIAGSLIK  244 (427)
T ss_dssp             HHHHHHHHTCTTEEEEEEECSCCSSSSCCCCHHHHHHHHHHHHHHCTTSEEEEECTTTTTSSSSCGGGGTCSEEEEETTS
T ss_pred             HHHHHHhhCCCCCEEEEEEcCCCCCCCCcccHHHHHHHHHHHHHhCCCCEEEEECCCccccccCCccccCCeEEEecCcc
Confidence                  0   12578888652   222   44567778889999  99999999999998732         2344432 


Q ss_pred             --------CCchhhh--hHHHHHhhcc-CCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCE
Q psy10669        174 --------TGEKILY--DYEEKINNAV-FPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYH  242 (337)
Q Consensus       174 --------~Gg~i~~--~l~~~i~~~~-~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~  242 (337)
                              .||++++  ++.+++.... .|++..... +...+...++.-+  ...+.++++..+|++++++.|.+.|++
T Consensus       245 ~lgg~g~~~gG~i~~~~~li~~l~~~~~~~~~g~~~~-~~~~~a~~~l~gl--~~~~~r~~~~~~~a~~la~~L~~~g~~  321 (427)
T 3i16_A          245 NIGGGIAPTGGYLAGTKDCIEKTSYRLTVPGIGGECG-STFGVVRSMYQGL--FLAPHISMEALKGAILCSRIMELAGFE  321 (427)
T ss_dssp             GGGTTTCCSCEEEEECHHHHHHHHHHHSCTTTGGGCC-CCTTCHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHTTCE
T ss_pred             cCCCCCCceEEEEEECHHHHHHHHHhcccCccCccCC-ccHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence                    3677776  5777666532 333321111 1011111122222  234688999999999999999999999


Q ss_pred             EecCCCCCe-----EEEEEecCCCcchHHHHHHHhhc
Q psy10669        243 VVTGGTDVH-----LILIDLRKNKLTGSKVELVLEEI  274 (337)
Q Consensus       243 v~~~~t~~h-----~v~V~~~~~~~~~~~~~~~L~~~  274 (337)
                      |+.  +.+|     +++|.+++.. ....+.+.|...
T Consensus       322 V~p--~~~~~~~~~i~~i~l~~~~-~~~~f~~~l~~~  355 (427)
T 3i16_A          322 VMP--KYDEKRSDIIQSIKFNDKD-KLIEFCKGIQTG  355 (427)
T ss_dssp             EES--CTTSCCSSSCEEEECSSHH-HHHHHHHHHHHT
T ss_pred             ecC--CCCCCCccEEEEEEECCHH-HHHHHHHHHhhc
Confidence            965  3777     9999887433 455666667654

>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3

Probab=99.60  E-value=2.9e-13  Score=130.03  Aligned_cols=242  Identities=12%  Similarity=0.018  Sum_probs=160.2

Q ss_pred             ceeeeccCC-CCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCC-CCCCCcceeecCCC-chh
Q psy10669         32 GIELIASEN-FTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNL-DPEQWGCNVQPYSG-SPA  108 (337)
Q Consensus        32 ~i~l~asen-~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~-~~~~~~~~v~~~Sg-t~A  108 (337)
                      .+.|-..++ ..||.|.+++...+.+.  .+++++..+.-..........+++.+++++|. +.    .++.+++| +.|
T Consensus        29 ~i~l~~~~~~~~~~~v~~a~~~~~~~~--~~~~~~~~~~y~~~~~~~~~~l~~~la~~~~~~~~----~~v~~~~g~t~a  102 (420)
T 1t3i_A           29 LVYLDNAATSQKPRAVLEKLMHYYEND--NANVHRGAHQLSVRATDAYEAVRNKVAKFINARSP----REIVYTRNATEA  102 (420)
T ss_dssp             CEECBTTTCCCCCHHHHHHHHHHHHHT--CCCC--CCSHHHHHHHHHHHHHHHHHHHHTTCSCG----GGEEEESSHHHH
T ss_pred             eEEecCCccCCCCHHHHHHHHHHHHhc--cCCCCcccchHHHHHHHHHHHHHHHHHHHcCCCCC----CeEEEcCChHHH
Confidence            355543333 45899999998765442  23333221111111122333455789999998 33    24666555 789


Q ss_pred             HHHHHHhh----CCc---------------------------------------------c--cc-cccEEEEcCcc--c
Q psy10669        109 NFAVCEKA----LPT---------------------------------------------N--NA-RFDFLSSGTTC--Y  134 (337)
Q Consensus       109 N~~v~~aL----l~~---------------------------------------------~--~a-~pklII~~~S~--~  134 (337)
                      +..++.++    +++                                             +  +. ++++|++..-.  .
T Consensus       103 ~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~npt  182 (420)
T 1t3i_A          103 INLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDEQESFDLEHFKTLLSEKTKLVTVVHISNTL  182 (420)
T ss_dssp             HHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBCTTSSBCHHHHHHHCCTTEEEEEEESBCTTT
T ss_pred             HHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEeccCCCCCcCHHHHHHhhCCCceEEEEeCCcccc
Confidence            98888888    654                                             0  00 26777776332  4


Q ss_pred             ccccChHHHHHHhhhcCCeEEEeccccccccc---------eeeeec-c----CC-chhhh--hHHHHHhhccCCC----
Q psy10669        135 SRCLDYARFRQICDETDSIMFADMSHISGLIA---------GVKGVT-K----TG-EKILY--DYEEKINNAVFPS----  193 (337)
Q Consensus       135 ~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T~-~----~G-g~i~~--~l~~~i~~~~~p~----  193 (337)
                      +...|+++|.++|+++|+++++|++|+.|...         .++++. |    .| |+++.  ++.+.+.+...++    
T Consensus       183 G~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~sK~~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~  262 (420)
T 1t3i_A          183 GCVNPAEEIAQLAHQAGAKVLVDACQSAPHYPLDVQLIDCDWLVASGHKMCAPTGIGFLYGKEEILEAMPPFFGGGEMIA  262 (420)
T ss_dssp             CBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEEGGGTTSCTTCEEEEECHHHHHHSCCCSCSTTSEE
T ss_pred             cCcCCHHHHHHHHHHcCCEEEEEhhhccCCccCchhhcCCCEEEEehhhhcCCCceEEEEEchHHHhhcCceecCCCccc
Confidence            68889999999999999999999999988764         133333 2    23 55554  4666665443221    


Q ss_pred             ----------------CCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCC----CCCeE
Q psy10669        194 ----------------LQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGG----TDVHL  252 (337)
Q Consensus       194 ----------------~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~----t~~h~  252 (337)
                                      ..|+++....+++..++..+.+...++.+++..++++++.+.|.+. |+++....    ....+
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~  342 (420)
T 1t3i_A          263 EVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYLWQGLGQIPQLRLYGPNPKHGDRAAL  342 (420)
T ss_dssp             EECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTCTTEEEESCCGGGSCBCSE
T ss_pred             cccccccCCCCchhhccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhCCCeEEeCCCccccccCCE
Confidence                            1467888888888777777644345788999999999999999986 99887632    13667


Q ss_pred             EEEEecCCCcchHHHHHHHhhcCceeccC
Q psy10669        253 ILIDLRKNKLTGSKVELVLEEIAIACNKN  281 (337)
Q Consensus       253 v~V~~~~~~~~~~~~~~~L~~~gI~v~~~  281 (337)
                      +.+.+.  +.+..++.+.|.+.||.+.+.
T Consensus       343 ~~~~~~--~~~~~~~~~~l~~~gi~v~~~  369 (420)
T 1t3i_A          343 ASFNVA--GLHASDVATMVDQDGIAIRSG  369 (420)
T ss_dssp             EEEEET--TBCHHHHHHHHHTTTEECBCS
T ss_pred             EEEEEC--CCCHHHHHHHHHHCCeEEeec
Confidence            777765  346778888999899998763

>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*

Probab=99.60  E-value=1.7e-13  Score=130.94  Aligned_cols=241  Identities=10%  Similarity=-0.015  Sum_probs=163.0

Q ss_pred             ceeeecc-CCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCC-CCCCCcceeecCCC-chh
Q psy10669         32 GIELIAS-ENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNL-DPEQWGCNVQPYSG-SPA  108 (337)
Q Consensus        32 ~i~l~as-en~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~-~~~~~~~~v~~~Sg-t~A  108 (337)
                      .+.|-.. ....+|.|.+++...+.+.  .+++++..+.......+....+++.+++++|. +.    .+|.+++| +.|
T Consensus        24 ~i~l~~~~~~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~----~~v~~~~g~t~a   97 (406)
T 1kmj_A           24 LAYLDSAASAQKPSQVIDAEAEFYRHG--YAAVHRGIHTLSAQATEKMENVRKRASLFINARSA----EELVFVRGTTEG   97 (406)
T ss_dssp             CEECCTTTCCCCCHHHHHHHHHHHHHT--CCCCSSCSSHHHHHHHHHHHHHHHHHHHHTTCSCG----GGEEEESSHHHH
T ss_pred             eEEecCCccCCCCHHHHHHHHHHHHhh--cCCCCCCcchHHHHHHHHHHHHHHHHHHHcCCCCC----CeEEEeCChhHH
Confidence            3444433 3356999999998775542  23444322221112233344456799999998 33    25777666 689


Q ss_pred             HHHHHHhh----CCc-------------------------------------------cc----c-cccEEEEcCcc--c
Q psy10669        109 NFAVCEKA----LPT-------------------------------------------NN----A-RFDFLSSGTTC--Y  134 (337)
Q Consensus       109 N~~v~~aL----l~~-------------------------------------------~~----a-~pklII~~~S~--~  134 (337)
                      +..++.++    +++                                           .+    . ++++|++..-.  .
T Consensus        98 ~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~npt  177 (406)
T 1kmj_A           98 INLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFDEKTRLLAITHVSNVL  177 (406)
T ss_dssp             HHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCTTSCBCGGGHHHHCCTTEEEEEEESBCTTT
T ss_pred             HHHHHHHhhhhcCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEEecCCCCCcCHHHHHHHhccCCeEEEEeCCCccc
Confidence            98888888    654                                           00    0 26777776322  3


Q ss_pred             ccccChHHHHHHhhhcCCeEEEeccccccccc---------eeeeec-c----CC-chhhh--hHHHHHhhccCC-----
Q psy10669        135 SRCLDYARFRQICDETDSIMFADMSHISGLIA---------GVKGVT-K----TG-EKILY--DYEEKINNAVFP-----  192 (337)
Q Consensus       135 ~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T~-~----~G-g~i~~--~l~~~i~~~~~p-----  192 (337)
                      +...|+++|.++|+++|+++++|++|..|...         .++++. |    .| |+++.  ++.+.+.+...+     
T Consensus       178 G~~~~l~~i~~l~~~~~~~li~D~~~~~g~~~~~~~~~~~d~~~~s~~K~~g~~G~G~~~~~~~~~~~~~~~~~~~~~~~  257 (406)
T 1kmj_A          178 GTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHKLYGPTGIGILYVKEALLQEMPPWEGGGSMIA  257 (406)
T ss_dssp             CCBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEEGGGTTSCTTCEEEEECHHHHHHCCCSSCSTTSEE
T ss_pred             cCcCCHHHHHHHHHHcCCEEEEEchhhcCCCCCcccccCCCEEEEEchhccCCCCcEEEEEeHHHHhhcCCcccCCCcee
Confidence            68889999999999999999999999988764         133333 2    35 66655  566665543321     


Q ss_pred             ----------------CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEE
Q psy10669        193 ----------------SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILI  255 (337)
Q Consensus       193 ----------------~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V  255 (337)
                                      ...|++++..++++..++..+.+...++.++++.++.++|.+.|.+. |+++........++.+
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~  337 (406)
T 1kmj_A          258 TVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLGVIAF  337 (406)
T ss_dssp             EEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTSTTEEEESCTTCCSEEEE
T ss_pred             ecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCcCCEEEE
Confidence                            11467888888888788777654455788889999999999999986 8988762125677777


Q ss_pred             EecCCCcchHHHHHHHhhcCceecc
Q psy10669        256 DLRKNKLTGSKVELVLEEIAIACNK  280 (337)
Q Consensus       256 ~~~~~~~~~~~~~~~L~~~gI~v~~  280 (337)
                      .+.  +.+..++.+.|.+.||.+.+
T Consensus       338 ~~~--~~~~~~~~~~l~~~gi~v~~  360 (406)
T 1kmj_A          338 NLG--KHHAYDVGSFLDNYGIAVRT  360 (406)
T ss_dssp             EET--TCCHHHHHHHHHHTTEECEE
T ss_pred             EEC--CCCHHHHHHHHhhCCcEEEe
Confidence            764  44677888899889999864

>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0

Probab=99.59  E-value=1.3e-13  Score=132.84  Aligned_cols=245  Identities=16%  Similarity=0.078  Sum_probs=165.6

Q ss_pred             cceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCc---CcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeec-CCC-
Q psy10669         31 NGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKR---YYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQP-YSG-  105 (337)
Q Consensus        31 ~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r---~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~-~Sg-  105 (337)
                      +.+++.|.--.++|.|++++...+.+-+  |++.+-   .+.+. ...++-..+|++++++||++++   ..|.| ++| 
T Consensus         5 ~~~~f~pgpt~~~~~V~~a~~~~~~~~~--~~~~s~~~~~hr~~-~~~~~~~~~r~~la~ll~~~~~---~~v~f~t~~~   78 (361)
T 3m5u_A            5 RKINFSAGPSTLPLEILEQAQKELCDYQ--GRGYSIMEISHRTK-VFEEVHFGAQEKAKKLYELNDD---YEVLFLQGGA   78 (361)
T ss_dssp             CCEECCSSSCCCCHHHHHHHHHTSSSGG--GSSSCGGGSCSSSH-HHHHHHHHHHHHHHHHHTCCTT---EEEEEESSHH
T ss_pred             ceEeecCCCCCCcHHHHHHHHHHHHhcc--cCCceeeccCCCCH-HHHHHHHHHHHHHHHHhCCCCC---ceEEEEcCcH
Confidence            5688999999999999999998766543  443332   23332 3455666789999999999643   35777 666 


Q ss_pred             chhHHHHHHhhCCc----------------------------------c---------cc-cccEEEEcCccc--ccccC
Q psy10669        106 SPANFAVCEKALPT----------------------------------N---------NA-RFDFLSSGTTCY--SRCLD  139 (337)
Q Consensus       106 t~AN~~v~~aLl~~----------------------------------~---------~a-~pklII~~~S~~--~~~~d  139 (337)
                      |.+|..++.++++.                                  .         +. ++++|.+.+...  +...|
T Consensus        79 T~a~n~~~~~~~~~~~~~~i~~~~~~~~~~~~a~~~G~~v~~~~~~~~g~~~~~~~~~l~~~t~lv~~~~~e~~tG~~~~  158 (361)
T 3m5u_A           79 SLQFAMIPMNLALNGVCEYANTGVWTKKAIKEAQILGVNVKTVASSEESNFDHIPRVEFSDNADYAYICSNNTIYGTQYQ  158 (361)
T ss_dssp             HHHHHHHHHHHCCSSCEEEEECSHHHHHHHHHHHHTTCCEEEEEECTTTTSCSCCCCCCCTTSSEEEEESEETTTTEECS
T ss_pred             HHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHHHHcCCceEEEecccCcCCCcCChhhcCCCCCEEEEeCCCCCcceeCC
Confidence            78877777777632                                  1         00 246666664443  55444


Q ss_pred             hHHHHHHhhhcCCeEEEeccccccccc-------eeeeec-----cCC-chhh-h-hHHHHHhhcc------------CC
Q psy10669        140 YARFRQICDETDSIMFADMSHISGLIA-------GVKGVT-----KTG-EKIL-Y-DYEEKINNAV------------FP  192 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~~Gli~-------g~~~T~-----~~G-g~i~-~-~l~~~i~~~~------------~p  192 (337)
                           +|+++ |++++||++|++|.+.       .+.++.     |+| |++. . ++.+.+.+..            ..
T Consensus       159 -----~i~~~-~~~~~vD~~q~~g~~~id~~~~d~~~~s~~K~~gp~G~g~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~  232 (361)
T 3m5u_A          159 -----NYPKT-KTPLIVDASSDFFSRKVDFSNIALFYGGVQKNAGISGLSCIFIRKDMLERSKNKQIPSMLNYLTHAENQ  232 (361)
T ss_dssp             -----SCCCC-SSCEEEECGGGTTSSCCCCTTEEEEEEETTTTSSCTTCEEEEEEHHHHHHHHTCCCCGGGCHHHHHHTT
T ss_pred             -----ccccc-CCEEEEEcccccCCCCCCcccCCEEEEechhccCCCccEEEEEcHHHHhhhcCCCCCceeehHHHhhcC
Confidence                 26665 9999999999999987       133333     345 4443 2 4444433210            12


Q ss_pred             CCCCCCcHHHHHHHHHHHHHHhch-hhHHHHHHHHHHHHHHHHHHHhCC-C-EEecCC--CCCeEEEEEecC-CCcchHH
Q psy10669        193 SLQGGPHNHAIGAIATAMLQAQSD-EFKSYQAQVKANASHLSDEMIKRG-Y-HVVTGG--TDVHLILIDLRK-NKLTGSK  266 (337)
Q Consensus       193 ~~~g~~~~~~iaala~a~~e~~~~-~~~~y~~~v~~na~~l~~~L~~~G-~-~v~~~~--t~~h~v~V~~~~-~~~~~~~  266 (337)
                      ...+||+.+.+.++..|+.++.+. ..+...++..+++++|.+.|.+.| + .+....  ...+++.+.+.. .+++ .+
T Consensus       233 ~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~~~~~~-~~  311 (361)
T 3m5u_A          233 SLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECIDLSNGFYKGHADKKDRSLMNVSFNIAKNKDLE-PL  311 (361)
T ss_dssp             TCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHTSTTSEEESSCGGGBCSSEEEEEESSCTTHH-HH
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCeeeccCCHHHcCCeEEEEECCCchhhh-HH
Confidence            234799999999999999999865 578999999999999999999976 5 554321  123466666654 3445 45


Q ss_pred             HHHHHhhcCceeccCc----ccchhh
Q psy10669        267 VELVLEEIAIACNKNT----GISLAA  288 (337)
Q Consensus       267 ~~~~L~~~gI~v~~~~----girig~  288 (337)
                      +...|++.||.+..-.    ++|++.
T Consensus       312 ~~~~L~~~gI~~~~g~~~~g~iRiS~  337 (361)
T 3m5u_A          312 FVKEAEEAGMIGLKGHRILGGIRASI  337 (361)
T ss_dssp             HHHHHHHTTEECCBCCTTTCSEEEEC
T ss_pred             HHHHHHHCCCEEecCCCccCeEEEEc
Confidence            6688888999986542    788874

>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*

Probab=99.59  E-value=4.7e-14  Score=133.30  Aligned_cols=231  Identities=13%  Similarity=0.083  Sum_probs=157.2

Q ss_pred             ccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHh
Q psy10669         37 ASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEK  115 (337)
Q Consensus        37 asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~a  115 (337)
                      ++....+|.|.+++...+.+.+  ++|+.. |.......++...+++.+++++|+++    .++.+++| +.|+..++.+
T Consensus         7 ~~~~~~~~~v~~a~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~la~~~~~~~----~~i~~~~g~~~a~~~~~~~   79 (382)
T 4hvk_A            7 TSAKPVDERILEAMLPYMTESF--GNPSSV-HSYGFKAREAVQEAREKVAKLVNGGG----GTVVFTSGATEANNLAIIG   79 (382)
T ss_dssp             TTCCCCCHHHHHHHHHHHHTSC--CCTTCS-SHHHHHHHHHHHHHHHHHHHHTTCTT----EEEEEESSHHHHHHHHHHH
T ss_pred             CCcCCCCHHHHHHHHHHHHhhc--CCCccc-chHHHHHHHHHHHHHHHHHHHcCCCc----CeEEEECCchHHHHHHHHH
Confidence            4556779999999988766533  555553 32223334455556689999999976    35777666 6788888888


Q ss_pred             hC----Cc------------------------------------------cc----c-cccEEEEcCcc--cccccChHH
Q psy10669        116 AL----PT------------------------------------------NN----A-RFDFLSSGTTC--YSRCLDYAR  142 (337)
Q Consensus       116 Ll----~~------------------------------------------~~----a-~pklII~~~S~--~~~~~d~~~  142 (337)
                      ++    ++                                          .+    . ++++|++..-.  .+...|+++
T Consensus        80 ~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~  159 (382)
T 4hvk_A           80 YAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQPVEE  159 (382)
T ss_dssp             HHHHHGGGCCEEEEETTCCHHHHHHHHHHHHTTCEEEEECBCTTSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCCHHH
T ss_pred             hhhhhcCCCCEEEECCCCcHHHHHHHHHHHhcCCEEEEeccCCCCCcCHHHHHHHhccCceEEEEECCCCCceeeCCHHH
Confidence            76    43                                          00    0 26777776322  468889999


Q ss_pred             HHHHhhhcCCeEEEeccccccccc---------eeeeec-c----CC-chhhh--hHHHHHhhccCC------CCCCCCc
Q psy10669        143 FRQICDETDSIMFADMSHISGLIA---------GVKGVT-K----TG-EKILY--DYEEKINNAVFP------SLQGGPH  199 (337)
Q Consensus       143 l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T~-~----~G-g~i~~--~l~~~i~~~~~p------~~~g~~~  199 (337)
                      |.++|+++|+ +++|++|..|...         .++++. |    .| |+++.  +.  .+.+..+.      ...++++
T Consensus       160 i~~l~~~~~~-li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  236 (382)
T 4hvk_A          160 ISEVLAGKAA-LHIDATASVGQIEVDVEKIGADMLTISSNDIYGPKGVGALWIRKEA--KLQPVILGGGQENGLRSGSEN  236 (382)
T ss_dssp             HHHHHSSSSE-EEEECTTTBTTBCCCHHHHTCSEEEEESGGGTSCTTCEEEEEETTC--CCCCSSCSSCTGGGTSCSCCC
T ss_pred             HHHHHHHcCE-EEEEhHHhcCCCCCCchhcCCCEEEEeHHHhcCCCceEEEEEcCcc--CcCcccccCCCcCccccCCcC
Confidence            9999999999 9999999988764         133333 2    22 33332  22  22222211      1156788


Q ss_pred             HHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCC--CCeEEEEEecCCCcchHHHHHHHhhcCc
Q psy10669        200 NHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGT--DVHLILIDLRKNKLTGSKVELVLEEIAI  276 (337)
Q Consensus       200 ~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t--~~h~v~V~~~~~~~~~~~~~~~L~~~gI  276 (337)
                      .+.++++..++..+. ...++.+++..++.++|.+.|.+. |+++.....  -.+++.+.+.  +.+..++.+.|.+.||
T Consensus       237 ~~~~~~~~~al~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~gi  313 (382)
T 4hvk_A          237 VPSIVGFGKAAEITA-MEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFS--YIEGESIVLSLDMAGI  313 (382)
T ss_dssp             HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEET--TCCHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCCEEEEEEC--CCCHHHHHHHHHHCCE
Confidence            899999988887653 456888999999999999999984 888875211  1345555553  4578888899998999


Q ss_pred             eecc
Q psy10669        277 ACNK  280 (337)
Q Consensus       277 ~v~~  280 (337)
                      .+..
T Consensus       314 ~v~~  317 (382)
T 4hvk_A          314 QAST  317 (382)
T ss_dssp             BCBC
T ss_pred             EEee
Confidence            9875

>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}

Probab=99.59  E-value=2.7e-13  Score=127.54  Aligned_cols=246  Identities=12%  Similarity=0.086  Sum_probs=168.8

Q ss_pred             cceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecC-CCchhH
Q psy10669         31 NGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPY-SGSPAN  109 (337)
Q Consensus        31 ~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~-Sgt~AN  109 (337)
                      +.+++.++-..++|.|++++...+.+.. .+. +.+   + ....++...+++.+++++|.+.++   .+.++ ||+.|+
T Consensus         4 ~~~~~~p~p~~~~~~v~~~~~~~~~~~~-~~~-~~~---~-~~~~~~~~~~~~~la~~~g~~~~~---~v~~~~g~t~al   74 (362)
T 3ffr_A            4 NKIYFTPGPSELYPTVRQHMITALDEKI-GVI-SHR---S-KKFEEVYKTASDNLKTLLELPSNY---EVLFLASATEIW   74 (362)
T ss_dssp             CCEEECSSSCCCCTTHHHHHHHHHHTTT-TTS-CTT---S-HHHHHHHHHHHHHHHHHTTCCTTE---EEEEESCHHHHH
T ss_pred             cceeccCCCcCCCHHHHHHHHHHhcCCc-cCc-CCC---C-HHHHHHHHHHHHHHHHHhCCCCCc---EEEEeCCchHHH
Confidence            4688899999999999988876654321 111 111   1 122345555668999999986432   35554 458899


Q ss_pred             HHHHHhhCCc---------------------------------------cc-c--cccEEEEcCc--ccccccChHHHHH
Q psy10669        110 FAVCEKALPT---------------------------------------NN-A--RFDFLSSGTT--CYSRCLDYARFRQ  145 (337)
Q Consensus       110 ~~v~~aLl~~---------------------------------------~~-a--~pklII~~~S--~~~~~~d~~~l~e  145 (337)
                      ..++.+++++                                       .+ .  ++|+|++..-  ..+...|+++|.+
T Consensus        75 ~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~  154 (362)
T 3ffr_A           75 ERIIQNCVEKKSFHCVNGSFSKRFYEFAGELGREAYKEEAAFGKGFYPADITVPADAEIICLTHNETSSGVSMPVEDINT  154 (362)
T ss_dssp             HHHHHHHCSSEEEEEECSHHHHHHHHHHHHTTCEEEEEECCTTCCCCGGGCCCCTTCCEEEEESEETTTTEECCHHHHTT
T ss_pred             HHHHHhccCCcEEEEcCcHHHHHHHHHHHHhCCCeEEEecCCCCCCCHHHHhccCCccEEEEEcCCCCcceeCCHHHHHH
Confidence            8888988754                                       11 1  2687777632  3468899999999


Q ss_pred             Hhhhc-CCeEEEeccccccccc-------eeeeec-c-----CC-chhhh--hHHHHHhhccC-----------------
Q psy10669        146 ICDET-DSIMFADMSHISGLIA-------GVKGVT-K-----TG-EKILY--DYEEKINNAVF-----------------  191 (337)
Q Consensus       146 ia~~~-ga~l~vD~AH~~Gli~-------g~~~T~-~-----~G-g~i~~--~l~~~i~~~~~-----------------  191 (337)
                      +|+++ |+++++|++|..|...       .++++. |     .| |+++.  ++.+++.+...                 
T Consensus       155 la~~~p~~~li~D~a~~~~~~~~~~~~~d~~~~s~~K~~~~~~G~g~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~  234 (362)
T 3ffr_A          155 FRDKNKDALIFVDAVSSLPYPKFDWTKIDSVFFSVQKCFGLPAGLGVWILNDRVIEKSKALLAKRKSIGTYHTIPSMLEK  234 (362)
T ss_dssp             SGGGSTTSEEEEECTTTTTSSCCCTTSCSEEEEETTSTTCCCSCCEEEEEEHHHHHHHHHHHHTTCCCCSTTSHHHHHHH
T ss_pred             HHHhCCCCEEEEecccccCCcccChhHCcEEEEecccccCCCCceEEEEECHHHHHHhhhccccCCCCcccccHHHHHHH
Confidence            99999 9999999999988754       223333 2     23 45433  45444433211                 


Q ss_pred             ---CCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEec-C--CCCCeEEEEEecCCCcch
Q psy10669        192 ---PSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVT-G--GTDVHLILIDLRKNKLTG  264 (337)
Q Consensus       192 ---p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~-~--~t~~h~v~V~~~~~~~~~  264 (337)
                         ....++++...++++..++..+.....++.+++..++++++.+.|.+. |+++.. .  ...++++++.+..   +.
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~  311 (362)
T 3ffr_A          235 ARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALINTYIESSKVFSFGVEDAKLRSMTTIVANTTM---LP  311 (362)
T ss_dssp             HTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCSSEEESSSCGGGBCSSEEEEEESS---CH
T ss_pred             hhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccCceeccCChhhcCCceEEEecCC---CH
Confidence               122578889999999888887654446889999999999999999997 998875 1  1235566676654   67


Q ss_pred             HHHHHHHhhcCceeccCc------ccchhh
Q psy10669        265 SKVELVLEEIAIACNKNT------GISLAA  288 (337)
Q Consensus       265 ~~~~~~L~~~gI~v~~~~------girig~  288 (337)
                      .++.+.|.+.||.+.+..      .|||+.
T Consensus       312 ~~~~~~l~~~gi~~~~g~~~~~~~~iRis~  341 (362)
T 3ffr_A          312 GEINKILEPFDMAVGAGYGSKKETQIRIAN  341 (362)
T ss_dssp             HHHHHHHGGGTEEEEECSGGGTTTEEEEEC
T ss_pred             HHHHHHHHHCCeEEecCccccCCCEEEEEC
Confidence            888888888899988532      577764

>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*

Probab=99.58  E-value=6.1e-14  Score=134.89  Aligned_cols=232  Identities=13%  Similarity=0.130  Sum_probs=156.1

Q ss_pred             eeccCCCC----CHHHHHHHhhhhhhccCCCCCCCcCcCcc-chHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhH
Q psy10669         35 LIASENFT----SLAVLECLGSCLQNKYSEGLPGKRYYGGN-QFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPAN  109 (337)
Q Consensus        35 l~asen~~----~p~V~~a~~~~l~~~y~~g~~g~r~~~G~-~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN  109 (337)
                      .+.+++++    +|.|.+++...+. ++..+..+.+...|. ....+++    +++++++|.+.     ++.++||+.+|
T Consensus        50 ~~~~~~~~~~~~~p~v~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~----~~la~~~~~~~-----~i~~~sG~~a~  119 (401)
T 2bwn_A           50 VWCGNDYLGMGQHPVVLAAMHEALE-AVGAGSGGTRNISGTTAYHRRLE----AEIAGLHQKEA-----ALVFSSAYNAN  119 (401)
T ss_dssp             ECSCSCTTSGGGCHHHHHHHHHHHH-HHCSCCCSBTTTBCCBHHHHHHH----HHHHHHTTCSE-----EEEESCHHHHH
T ss_pred             EeeCCCcccCCCCHHHHHHHHHHHH-HcCCCCCCcCcccCChHHHHHHH----HHHHHHhCCCc-----EEEECCcHHHH
Confidence            34555553    7899999987654 444333333332233 3345554    68899999753     68899998899


Q ss_pred             HHHHHhhC--Cc--------------------------------------cc-----ccccEEEEcCcc--cccccChHH
Q psy10669        110 FAVCEKAL--PT--------------------------------------NN-----ARFDFLSSGTTC--YSRCLDYAR  142 (337)
Q Consensus       110 ~~v~~aLl--~~--------------------------------------~~-----a~pklII~~~S~--~~~~~d~~~  142 (337)
                      .+++.++.  .+                                      .+     .++++|++..-.  .+...|+++
T Consensus       120 ~~~~~~l~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~le~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~  199 (401)
T 2bwn_A          120 DATLSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIFRHNDVAHLRELIAADDPAAPKLIAFESVYSMDGDFGPIKE  199 (401)
T ss_dssp             HHHHHHHHHHSTTCEEEEETTCCHHHHHHHHHSCCCEEEECTTCHHHHHHHHHHSCTTSCEEEEEESBCTTTCCBCCHHH
T ss_pred             HHHHHHHhcCCCCCEEEECchhhHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHhhccCCceEEEEecCcCCCCCcCCHHH
Confidence            88877653  11                                      01     125777776333  357889999


Q ss_pred             HHHHhhhcCCeEEEeccccccccc--e---------------eeeec-c----CCchhhh--hHHHHHhhccCC--CCCC
Q psy10669        143 FRQICDETDSIMFADMSHISGLIA--G---------------VKGVT-K----TGEKILY--DYEEKINNAVFP--SLQG  196 (337)
Q Consensus       143 l~eia~~~ga~l~vD~AH~~Gli~--g---------------~~~T~-~----~Gg~i~~--~l~~~i~~~~~p--~~~g  196 (337)
                      |.++|+++|+++++|++|+.|+++  |               +.+|. |    .||+++.  ++.+.+.....+  ...+
T Consensus       200 i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~GG~~~~~~~~~~~l~~~~~~~~~~~~  279 (401)
T 2bwn_A          200 ICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFGGYIAASARMVDAVRSYAPGFIFSTS  279 (401)
T ss_dssp             HHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSCCEEEEECHHHHHHHHHHCHHHHTSBC
T ss_pred             HHHHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhccCCCCEEecCHHHHHHHHHhCcCceecCC
Confidence            999999999999999999987764  1               12232 2    3787765  455554432111  1133


Q ss_pred             CCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHH-hhcC
Q psy10669        197 GPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVL-EEIA  275 (337)
Q Consensus       197 ~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L-~~~g  275 (337)
                      + ++..++++..++..+.+..+++.++++.++.++|.+.|.+.|+++..  .+++++++.+.. +.+..++.+.| ++.|
T Consensus       280 ~-~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~--~~~~~~~~~~~~-~~~~~~~~~~L~~~~g  355 (401)
T 2bwn_A          280 L-PPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKALGMPIID--HGSHIVPVVIGD-PVHTKAVSDMLLSDYG  355 (401)
T ss_dssp             C-CHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHTCCBCC--CSSSCEEEECCC-HHHHHHHHHHHHHHHC
T ss_pred             C-CHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHCCCcccC--CCCCeEEEEeCC-hHHHHHHHHHHHhcCC
Confidence            3 34777777788877654345788999999999999999988988875  455688887753 34567777777 4789


Q ss_pred             ceecc
Q psy10669        276 IACNK  280 (337)
Q Consensus       276 I~v~~  280 (337)
                      |.+.+
T Consensus       356 i~v~~  360 (401)
T 2bwn_A          356 VYVQP  360 (401)
T ss_dssp             EECCE
T ss_pred             EEEee
Confidence            99864

>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3

Probab=99.57  E-value=5.7e-13  Score=125.01  Aligned_cols=239  Identities=13%  Similarity=0.014  Sum_probs=164.2

Q ss_pred             eeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecC-CCchhHHH
Q psy10669         33 IELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPY-SGSPANFA  111 (337)
Q Consensus        33 i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~-Sgt~AN~~  111 (337)
                      +++.|.-..++|.|++++...+..        .+++    ...+....+++.+++++|.++    .++.++ ||+.|+..
T Consensus         3 ~l~~~~p~~~~~~v~~a~~~~~~~--------~~~~----~~~~~~~~l~~~la~~~g~~~----~~i~~~~g~t~a~~~   66 (352)
T 1iug_A            3 WLLTPGPVRLHPKALEALARPQLH--------HRTE----AAREVFLKARGLLREAFRTEG----EVLILTGSGTLAMEA   66 (352)
T ss_dssp             EECSSSSCCCCHHHHHHHHSCCCC--------TTSH----HHHHHHHHHHHHHHHHHTCSS----EEEEEESCHHHHHHH
T ss_pred             ccccCCCCCCCHHHHHHhccCCCC--------ccCH----HHHHHHHHHHHHHHHHhCCCC----ceEEEcCchHHHHHH
Confidence            677888888999999999765321        1111    122333445678899999874    256665 55889988


Q ss_pred             HHHhhCCc-----------------------------------------cc--ccccEEEEcCcc--cccccChHHHHHH
Q psy10669        112 VCEKALPT-----------------------------------------NN--ARFDFLSSGTTC--YSRCLDYARFRQI  146 (337)
Q Consensus       112 v~~aLl~~-----------------------------------------~~--a~pklII~~~S~--~~~~~d~~~l~ei  146 (337)
                      ++.+++++                                         .+  .++++|++..-.  .+...|+++|.++
T Consensus        67 ~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~v~~~~~~nptG~~~~l~~i~~l  146 (352)
T 1iug_A           67 LVKNLFAPGERVLVPVYGKFSERFYEIALEAGLVVERLDYPYGDTPRPEDVAKEGYAGLLLVHSETSTGALADLPALARA  146 (352)
T ss_dssp             HHHHHCCTTCEEEEEECSHHHHHHHHHHHHTTCEEEEEECCTTCCCCTTTSCCSSCSEEEEESEETTTTEECCHHHHHHH
T ss_pred             HHHhccCCCCeEEEEeCCchhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHhccCCcEEEEEEecCCcceecCHHHHHHH
Confidence            88998654                                         11  126777776333  3688899999999


Q ss_pred             hhhc--CCeEEEeccccccccc---------eeeeeccC------C-chhhh--hHHHH---------H----hhccCCC
Q psy10669        147 CDET--DSIMFADMSHISGLIA---------GVKGVTKT------G-EKILY--DYEEK---------I----NNAVFPS  193 (337)
Q Consensus       147 a~~~--ga~l~vD~AH~~Gli~---------g~~~T~~~------G-g~i~~--~l~~~---------i----~~~~~p~  193 (337)
                      |+++  |+++++|++|..|...         .++++.+|      | |+++.  ++.+.         +    .......
T Consensus       147 ~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (352)
T 1iug_A          147 FKEKNPEGLVGADMVTSLLVGEVALEAMGVDAAASGSQKGLMCPPGLGFVALSPRALERLKPRGYYLDLARELKAQKEGE  226 (352)
T ss_dssp             HHHHCTTCEEEEECTTTBTTBCCCSGGGTCSEEEEESSSTTCCCSCEEEEEECHHHHHTCCCCSSTTCHHHHHHHHTTTC
T ss_pred             HHhhCCCCEEEEECCccccCcceeccccCeeEEEecCcccccCCCceeEEEECHHHHHHhhCCCceeeHHHHHhhcccCC
Confidence            9999  9999999999877653         13334332      4 55543  33322         1    1110112


Q ss_pred             CCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhh
Q psy10669        194 LQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEE  273 (337)
Q Consensus       194 ~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~  273 (337)
                      ..++++.+.++++..++..+.+ .+++.++++.++.++|.+.|.+.|+++.......+++++.+.. +.+..++.+.|.+
T Consensus       227 ~~~~~~~~~~~a~~~al~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~  304 (352)
T 1iug_A          227 SAWTPAINLVLAVAAVLEEVLP-RLEEHLALKAWQNALLYGVGEEGGLRPVPKRFSPAVAAFYLPE-GVPYARVKEAFAQ  304 (352)
T ss_dssp             CSSCCCHHHHHHHHHHHHHHGG-GHHHHHHHHHHHHHHHHHHHHHTTCEESCSSBCTTCEEEECCT-TCCHHHHHHHHHT
T ss_pred             CCCCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCcccccccCCeEEEEEcCC-CCCHHHHHHHHHH
Confidence            2568888999998888887643 4788999999999999999999999887521246677787753 4577888888888


Q ss_pred             cCceeccCc------ccchhhh
Q psy10669        274 IAIACNKNT------GISLAAE  289 (337)
Q Consensus       274 ~gI~v~~~~------girig~~  289 (337)
                      .||.+.+..      .+||+..
T Consensus       305 ~gi~v~~~~~~~~~~~iRi~~~  326 (352)
T 1iug_A          305 RGAVIAGGQGPLKGKVFRLSLM  326 (352)
T ss_dssp             TTEECEECCGGGTTTEEEECCC
T ss_pred             CCEEEEeCCCccCCCEEEEEcc
Confidence            899987532      5777654

>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}

Probab=99.57  E-value=5.3e-14  Score=136.38  Aligned_cols=240  Identities=13%  Similarity=0.049  Sum_probs=156.1

Q ss_pred             eccCCCCCHHHHHHHhhhhhhccCCCCCCCc---CcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeec-CC-CchhHH
Q psy10669         36 IASENFTSLAVLECLGSCLQNKYSEGLPGKR---YYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQP-YS-GSPANF  110 (337)
Q Consensus        36 ~asen~~~p~V~~a~~~~l~~~y~~g~~g~r---~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~-~S-gt~AN~  110 (337)
                      .|+--.+||.|++++...+.+.|  |++.+-   .+.+. ...++-..+|++++++||++++   ..|.| ++ ||.++.
T Consensus        18 ~at~~~~p~~Vl~a~~~~~~~~~--~n~~s~~~~~hr~~-~~~~~~~~ar~~la~ll~~~~~---~evif~t~~~T~a~n   91 (377)
T 3e77_A           18 LYFQSMLPHSVLLEIQKELLDYK--GVGISVLEMSHRSS-DFAKIINNTENLVRELLAVPDN---YKVIFLQGGGCGQFS   91 (377)
T ss_dssp             EECSCCCCHHHHHHHHHTSSSGG--GSSSCTTTCCTTSH-HHHHHHHHHHHHHHHHHTCCTT---EEEEEESSHHHHHHH
T ss_pred             ccccCCCCHHHHHHHHHHHHhcc--cCCccccccCCCCH-HHHHHHHHHHHHHHHHhCCCCC---CeEEEEcCchHHHHH
Confidence            45555679999999998876644  333221   23333 3455666789999999999753   25777 44 488876


Q ss_pred             HHHHhhCC----c-----------------------------------------ccc---cccEEEEcCcc--cccccCh
Q psy10669        111 AVCEKALP----T-----------------------------------------NNA---RFDFLSSGTTC--YSRCLDY  140 (337)
Q Consensus       111 ~v~~aLl~----~-----------------------------------------~~a---~pklII~~~S~--~~~~~d~  140 (337)
                      +++.+++.    +                                         +.+   ++++|.+.+..  .+...|+
T Consensus        92 ~a~~~l~~~~~Gd~v~~~~~g~~~~~~~~~a~~~G~~~~~~~~~~~~~~~~~~~~~~i~~~t~lV~~~h~et~tG~~~pi  171 (377)
T 3e77_A           92 AVPLNLIGLKAGRCADYVVTGAWSAKAAEEAKKFGTINIVHPKLGSYTKIPDPSTWNLNPDASYVYYCANETVHGVEFDF  171 (377)
T ss_dssp             HHHHHHGGGSTTCEEEECCCSHHHHHHHHHHTTTSEEEECSCCCSSSCSCCCGGGCCCCTTCSCEEEESEETTTTEECSS
T ss_pred             HHHHhccCCCCCCeEEEEECCHHHHHHHHHHHHhCCceEEeccCCCcCCCCChHHhccCCCccEEEEeCccCchheEchh
Confidence            66777752    1                                         111   15777776444  4777887


Q ss_pred             HHHHHHhhhcCCeEEEeccccccccc------e-eeee-c----cCC-chhh-h-hHHHHHhh-----------ccCCCC
Q psy10669        141 ARFRQICDETDSIMFADMSHISGLIA------G-VKGV-T----KTG-EKIL-Y-DYEEKINN-----------AVFPSL  194 (337)
Q Consensus       141 ~~l~eia~~~ga~l~vD~AH~~Gli~------g-~~~T-~----~~G-g~i~-~-~l~~~i~~-----------~~~p~~  194 (337)
                           ||+++|++++||++|++|.+.      + +.++ +    |+| |++. . ++.+++.+           .-.+..
T Consensus       172 -----i~~~~~~~~~vD~~q~~g~~~id~~~~~~~~~s~~K~~gp~G~g~l~~~~~~l~~~~~~~p~~~~~~~~~~~~~~  246 (377)
T 3e77_A          172 -----IPDVKGAVLVCDMSSNFLSKPVDVSKFGVIFAGAQKNVGSAGVTVVIVRDDLLGFALRECPSVLEYKVQAGNSSL  246 (377)
T ss_dssp             -----CCCCTTCCEEEECTTTTTSSCCCGGGCSEEEEEGGGTTSCTTCEEEEEETTSCSCCCTTSCGGGCHHHHHTTTTC
T ss_pred             -----hhccCCCEEEEEcccccCCCCCchhhcCEEEEecccccCCCccEEEEEcHHHHhhccCCCCchhhHHHHhhcCCC
Confidence                 688999999999999999987      2 2333 2    344 4432 2 22111110           001234


Q ss_pred             CCCCcHHHHHHHHHHHHHHhch-hhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCC--Ce-EEEEEecCCCcch-----
Q psy10669        195 QGGPHNHAIGAIATAMLQAQSD-EFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTD--VH-LILIDLRKNKLTG-----  264 (337)
Q Consensus       195 ~g~~~~~~iaala~a~~e~~~~-~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~--~h-~v~V~~~~~~~~~-----  264 (337)
                      .+||+.+.++++..+++++.+. ..+...++..+++++|.+.|.+. |+.+.....+  ++ ++.+.+.  ++++     
T Consensus       247 ~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~--~~~~~~~~~  324 (377)
T 3e77_A          247 YNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRIG--NAKGDDALE  324 (377)
T ss_dssp             SSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSEECCSCGGGBCSSEEEEEES--STTCCHHHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhcCCceecCCCHHHcCCcEEEEEcC--CCCCchhHH
Confidence            6899999999999999999765 46889999999999999999996 8886431111  22 3444444  3332     


Q ss_pred             HHHHHHHhhcCceeccCc----ccchhh
Q psy10669        265 SKVELVLEEIAIACNKNT----GISLAA  288 (337)
Q Consensus       265 ~~~~~~L~~~gI~v~~~~----girig~  288 (337)
                      ..+-+.|++.||.+.+-.    ++|++.
T Consensus       325 ~~~l~~l~~~Gi~~~~g~~~~g~iRiS~  352 (377)
T 3e77_A          325 KRFLDKALELNMLSLKGHRSVGGIRASL  352 (377)
T ss_dssp             HHHHHHHHHTTEESCBCCTTTCSEEEEC
T ss_pred             HHHHHHHHHCCcEEeCCCCcCCEEEEEC
Confidence            234455567899986542    788774

>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*

Probab=99.57  E-value=2.1e-13  Score=129.26  Aligned_cols=240  Identities=10%  Similarity=-0.032  Sum_probs=162.9

Q ss_pred             ceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHH
Q psy10669         32 GIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANF  110 (337)
Q Consensus        32 ~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~  110 (337)
                      .+.+.+.-..++|.|++++...+.+.        +    .....++...+++.+++++|++.+ + .++.+++| +.|+.
T Consensus         3 ~~~~~~gp~~~~~~v~~a~~~~~~~~--------~----~~~~~~~~~~~~~~la~~~~~~~~-~-~~v~~~~g~t~al~   68 (384)
T 3zrp_A            3 KLLLHVGPTTIKEDVLVAGLENNVGF--------T----SKEFVEALAYSLKGLRYVMGASKN-Y-QPLIIPGGGTSAME   68 (384)
T ss_dssp             ---CCSSCSCCCHHHHHHTTCCSCCT--------T----SHHHHHHHHHHHHHHHHHHTCCTT-S-EEEEEESCHHHHHH
T ss_pred             ceeccCCCCCCCHHHHHHhhcccccc--------c----cHHHHHHHHHHHHHHHHHhCCCCC-C-cEEEEcCCcHHHHH
Confidence            35677778888999999997643211        1    112244555566799999998852 1 13555555 78888


Q ss_pred             HHHHhhCCc-----------------------------------------cc-----c-cccEEEEcCcc--cccccChH
Q psy10669        111 AVCEKALPT-----------------------------------------NN-----A-RFDFLSSGTTC--YSRCLDYA  141 (337)
Q Consensus       111 ~v~~aLl~~-----------------------------------------~~-----a-~pklII~~~S~--~~~~~d~~  141 (337)
                       ++.+++++                                         .+     . ++++|++..-.  .+...|++
T Consensus        69 -~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~  147 (384)
T 3zrp_A           69 -SVTSLLKPNDKILVVSNGVFGDRWEQIFKRYPVNVKVLRPSPGDYVKPGEVEEEVRKSEYKLVALTHVETSTGVREPVK  147 (384)
T ss_dssp             -HGGGGCCTTCEEEEECSSHHHHHHHHHHTTSSCEEEEECCSTTCCCCHHHHHHHHHHSCEEEEEEESEETTTTEECCHH
T ss_pred             -HHHhhcCCCCEEEEecCCcchHHHHHHHHHcCCcEEEecCCCCCCCCHHHHHHHHHhCCCcEEEEeCCCCCCceECcHH
Confidence             78888754                                         00     0 26777776322  46888999


Q ss_pred             HHHHHhhhcCCeEEEeccccccccc---------eeeeeccC------C-chhhh--hHHHHH-hh------------c-
Q psy10669        142 RFRQICDETDSIMFADMSHISGLIA---------GVKGVTKT------G-EKILY--DYEEKI-NN------------A-  189 (337)
Q Consensus       142 ~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T~~~------G-g~i~~--~l~~~i-~~------------~-  189 (337)
                      +|.++|+++|+++++|++|..|...         .++++.+|      | |+++.  ++.+.+ .+            . 
T Consensus       148 ~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (384)
T 3zrp_A          148 DVINKIRKYVELIVVDGVSSVGAEEVKAEEWNVDVYLTASQKALGSAAGLGLLLLSPKALSILDSQNSIAGYYLDLRNWL  227 (384)
T ss_dssp             HHHHHHGGGEEEEEEECTTTTTTSCCCTTTTTCSEEEEETTSTTCCCSSEEEEEECHHHHHHHHHCCCSCCSTTCHHHHH
T ss_pred             HHHHHHHhcCCEEEEECcccccCccccccccCCCEEEecCcccccCCCceEEEEECHHHHHHhcCCCCCCcccccHHHHH
Confidence            9999999999999999999988754         13334322      2 44443  454444 10            0 


Q ss_pred             ----c----CCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCC---CCCeEEEEEec
Q psy10669        190 ----V----FPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGG---TDVHLILIDLR  258 (337)
Q Consensus       190 ----~----~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~---t~~h~v~V~~~  258 (337)
                          .    .....|+++.+.++++..++..+.....++.++++.++.++|.+.|.+.|+++....   ...+++++.+.
T Consensus       228 ~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~  307 (384)
T 3zrp_A          228 PVMRGAEEGKAAYFATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIRAGLEALGLEIVARRPESYSNTVTGVILK  307 (384)
T ss_dssp             HHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSCSSGGGBCSSEEEEECS
T ss_pred             HHHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHCCCeEccCcccccCccEEEEECC
Confidence                0    112236899999999999988875444688999999999999999999999887521   12566667765


Q ss_pred             CCCcchHHHHHHHhhcCceeccCc-----ccchhh
Q psy10669        259 KNKLTGSKVELVLEEIAIACNKNT-----GISLAA  288 (337)
Q Consensus       259 ~~~~~~~~~~~~L~~~gI~v~~~~-----girig~  288 (337)
                      .  .+..++.+.|.+.||.+....     .|||+.
T Consensus       308 ~--~~~~~~~~~l~~~gi~v~~g~~~~~~~iRi~~  340 (384)
T 3zrp_A          308 V--ADPQKVLAGTVNEGVEFAPGVHPAFKYFRIGH  340 (384)
T ss_dssp             S--SCHHHHHHHHHTTTCCCEECCCTTCCEEEEEC
T ss_pred             C--CCHHHHHHHHHHCCEEEecCCCCCcCEEEEec
Confidence            4  578888888988899987533     378763

>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}

Probab=99.57  E-value=2e-13  Score=131.07  Aligned_cols=234  Identities=14%  Similarity=0.199  Sum_probs=157.0

Q ss_pred             eeeeccCC--C-CCHHHHHHHhhhhhhccCCCCCCCcCcCccch-HHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchh
Q psy10669         33 IELIASEN--F-TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQF-IDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPA  108 (337)
Q Consensus        33 i~l~asen--~-~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~-~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~A  108 (337)
                      |.|...++  + .+|.+.+++...+. ++..++.+.++..|... .++++    +.+++++|.+.     .+..++|+.|
T Consensus        46 idl~~~~~~~~~~~~~v~~a~~~~~~-~~~~~~~~~~~~~g~~~~~~~l~----~~la~~~g~~~-----v~~~~ggt~a  115 (398)
T 3a2b_A           46 LMFGSNSYLGLTTDTRIIKAAQDALE-KYGTGCAGSRFLNGTLDIHVELE----EKLSAYVGKEA-----AILFSTGFQS  115 (398)
T ss_dssp             EECSCSCTTCGGGCHHHHHHHHHHHH-HHCSCCCSBTTTTCCCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHH
T ss_pred             EEeecccccCCCCCHHHHHHHHHHHH-HcCCCCCCcCcccCCcHHHHHHH----HHHHHHhCCCc-----EEEECCHHHH
Confidence            44444433  2 68999999987654 44444555555556533 34454    57888999763     3555666899


Q ss_pred             HHHHHHhhCCc------------------------------------c--c-c----cccEEEEcCccc--ccccChHHH
Q psy10669        109 NFAVCEKALPT------------------------------------N--N-A----RFDFLSSGTTCY--SRCLDYARF  143 (337)
Q Consensus       109 N~~v~~aLl~~------------------------------------~--~-a----~pklII~~~S~~--~~~~d~~~l  143 (337)
                      +..++.+++++                                    +  + .    ++++|++....+  +...|+++|
T Consensus       116 ~~~~~~~~~~~gd~V~~~~p~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~v~~~~~~nptG~~~~~~~l  195 (398)
T 3a2b_A          116 NLGPLSCLMGRNDYILLDERDHASIIDGSRLSFSKVIKYGHNNMEDLRAKLSRLPEDSAKLICTDGIFSMEGDIVNLPEL  195 (398)
T ss_dssp             HHHHHHHSSCTTCEEEEETTCCHHHHHHHHHSSSEEEEECTTCHHHHHHHHHTSCSSSCEEEEEESBCTTTCCBCCHHHH
T ss_pred             HHHHHHHHhCCCCEEEECCccCHHHHHHHHHcCCceEEeCCCCHHHHHHHHHhhccCCceEEEEeCCCCCCCCccCHHHH
Confidence            98888998764                                    0  0 1    356777764333  567889999


Q ss_pred             HHHhhhcCCeEEEeccccccccc----------e-------eeeec-c----CCchhhh--hHHHHHhhccCCCC-CCCC
Q psy10669        144 RQICDETDSIMFADMSHISGLIA----------G-------VKGVT-K----TGEKILY--DYEEKINNAVFPSL-QGGP  198 (337)
Q Consensus       144 ~eia~~~ga~l~vD~AH~~Gli~----------g-------~~~T~-~----~Gg~i~~--~l~~~i~~~~~p~~-~g~~  198 (337)
                      .++|+++|+++++|++|..|.++          +       +++|. |    .||+++.  ++.+.+.....+.. .+++
T Consensus       196 ~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~GG~~~~~~~~~~~l~~~~~~~~~~~~~  275 (398)
T 3a2b_A          196 TSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLASLGGFVAGDADVIDFLKHNARSVMFSASM  275 (398)
T ss_dssp             HHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSCEEEEECHHHHHHHHHHCHHHHSSBCC
T ss_pred             HHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEecccccccCCCcEEEeCHHHHHHHHHhcccceecCCC
Confidence            99999999999999999877542          1       22333 2    3788765  56665554322222 3345


Q ss_pred             cHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCcee
Q psy10669        199 HNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIAC  278 (337)
Q Consensus       199 ~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v  278 (337)
                      ++...+++..++...  ...++.++++.++.++|.+.|.+.|+++..  .+++++++.+.. +.+..++.+.|.+.||.+
T Consensus       276 ~~~~~a~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~--~~g~~~~~~~~~-~~~~~~l~~~l~~~gi~v  350 (398)
T 3a2b_A          276 TPASVASTLKALEII--QNEPEHIEKLWKNTDYAKAQLLDHGFDLGA--TESPILPIFIRS-NEKTFWVTKMLQDDGVFV  350 (398)
T ss_dssp             CHHHHHHHHHHHHHH--HHCTHHHHHHHHHHHHHHHHHHHTTCCBCS--CCSSEEEEECCC-HHHHHHHHHHHHHTTEEC
T ss_pred             CHHHHHHHHHHHHHH--hhCHHHHHHHHHHHHHHHHHHHhcCCCcCC--CCCCEEEEEcCC-HHHHHHHHHHHHHCCcEE
Confidence            555555555666654  245678999999999999999999998865  456788888753 345677777887779998


Q ss_pred             ccC
Q psy10669        279 NKN  281 (337)
Q Consensus       279 ~~~  281 (337)
                      .+.
T Consensus       351 ~~~  353 (398)
T 3a2b_A          351 NPV  353 (398)
T ss_dssp             EEE
T ss_pred             Eee
Confidence            763

>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}

Probab=99.56  E-value=6.3e-13  Score=126.19  Aligned_cols=250  Identities=11%  Similarity=0.028  Sum_probs=165.4

Q ss_pred             HHHhhcccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecC
Q psy10669         24 KEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPY  103 (337)
Q Consensus        24 ~e~~rq~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~  103 (337)
                      .|.-+-..+.++.|+...++|.|++++...+..        .+   + ....++...+++.+++++|.+.+..  .+.++
T Consensus        12 ~~~~~~~~~~~~~pgp~~~~~~v~~a~~~~~~~--------~~---~-~~~~~~~~~~~~~la~~~g~~~~~~--~i~~~   77 (376)
T 3f0h_A           12 HENLYFQGMLNFTVGPVMSSEEVRAIGAEQVPY--------FR---T-TEFSSTMLENEKFMLEYAKAPEGSK--AVFMT   77 (376)
T ss_dssp             ---CTTSSCEECSSSSCCCCHHHHHHHTSCCCC--------CS---S-HHHHHHHHHHHHHHHHHHTCCTTCE--EEEES
T ss_pred             cccccccCceeecCCCCCCcHHHHHHhcCCCCC--------CC---C-HHHHHHHHHHHHHHHHHhCCCCCce--EEEEc
Confidence            344455578999999999999999999764321        11   1 1223444455678899999874211  24434


Q ss_pred             C-CchhHHHHHHhhCCc-------------------------------------------ccc---cccEEEEc--Cccc
Q psy10669        104 S-GSPANFAVCEKALPT-------------------------------------------NNA---RFDFLSSG--TTCY  134 (337)
Q Consensus       104 S-gt~AN~~v~~aLl~~-------------------------------------------~~a---~pklII~~--~S~~  134 (337)
                      + |+.|+..++.+++++                                           +.+   ++++|++.  .+..
T Consensus        78 ~ggt~al~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~~v~~~~~~npt  157 (376)
T 3f0h_A           78 CSSTGSMEAVVMNCFTKKDKVLVIDGGSFGHRFVQLCEIHEIPYVALKLEHGKKLTKEKLYEYDNQNFTGLLVNVDETST  157 (376)
T ss_dssp             SCHHHHHHHHHHHHCCTTCCEEEEESSHHHHHHHHHHHHTTCCEEEEECCTTCCCCHHHHHTTTTSCCCEEEEESEETTT
T ss_pred             CChhHHHHHHHHhccCCCCeEEEEeCChhhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHhhccCceEEEEecccCCc
Confidence            4 489998888888754                                           111   26888876  3446


Q ss_pred             ccccChHHHHHHhhhcCCeEEEeccccccccc---------eeeeec-c-----CC-chhhh--hHHHHHhhccCC----
Q psy10669        135 SRCLDYARFRQICDETDSIMFADMSHISGLIA---------GVKGVT-K-----TG-EKILY--DYEEKINNAVFP----  192 (337)
Q Consensus       135 ~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T~-~-----~G-g~i~~--~l~~~i~~~~~p----  192 (337)
                      +...|+++|.++|+++|+++++|++|..|...         .++++. |     .| |+++.  ++.+.+.+...+    
T Consensus       158 G~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~~~~~~~~~~~~  237 (376)
T 3f0h_A          158 AVLYDTMMIGEFCKKNNMFFVCDCVSAFLADPFNMNECGADVMITGSQKVLACPPGISVIVLAPRGVERVEKSKVRTMYF  237 (376)
T ss_dssp             TEECCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEETTTTTCCCSSCEEEEECHHHHHHHHTCCCCCSTT
T ss_pred             ceecCHHHHHHHHHHcCCEEEEEcCccccCccccccccCccEEEecCcccccCCCceEEEEECHHHHHHhhcCCCCceee
Confidence            78899999999999999999999999987654         123333 2     12 44433  455555532111    


Q ss_pred             ------------CCCCCCcHHHHHHHHHHHHHHhch-hhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecC
Q psy10669        193 ------------SLQGGPHNHAIGAIATAMLQAQSD-EFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRK  259 (337)
Q Consensus       193 ------------~~~g~~~~~~iaala~a~~e~~~~-~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~  259 (337)
                                  +...+++...++++..++..+.+. ..++.+++..++.++|.+.|.+.|+++........++.+.  .
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~--~  315 (376)
T 3f0h_A          238 DLKDALKNQERGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIKDLPFELVSESPANGVTSVH--P  315 (376)
T ss_dssp             CHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTSSEEECCSSBBTTEEEEE--E
T ss_pred             cHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCccCccccCceEEEEe--C
Confidence                        123466667778888888877543 3578889999999999999999898876532233444333  3


Q ss_pred             CCcchHHHHHHHhhc-CceeccCc------ccchhhh
Q psy10669        260 NKLTGSKVELVLEEI-AIACNKNT------GISLAAE  289 (337)
Q Consensus       260 ~~~~~~~~~~~L~~~-gI~v~~~~------girig~~  289 (337)
                      .+.+..++.+.|.+. ||.+.+..      .|||+..
T Consensus       316 ~~~~~~~l~~~l~~~~gi~v~~g~~~~~~~~lRis~~  352 (376)
T 3f0h_A          316 TTANAYDIFLKLKDEYGIWICPNGGEMKDTIFRVGHI  352 (376)
T ss_dssp             SSSCHHHHHHHHHHHSSEECEECCGGGTTTCEEEECC
T ss_pred             CCCCHHHHHHHHHHhCCEEEecCccccCCCEEEEecC
Confidence            455778888888875 99987532      4777643

>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*

Probab=99.56  E-value=2.4e-14  Score=140.15  Aligned_cols=244  Identities=13%  Similarity=0.066  Sum_probs=157.6

Q ss_pred             HHHHHHHHHHhhcccceeeeccCCCCCHHHHHHHhhhhhhccCCC-CCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCC
Q psy10669         17 ELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEG-LPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQ   95 (337)
Q Consensus        17 ~~~~~~~~e~~rq~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g-~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~   95 (337)
                      ++++-+.++.+++...+..+++.|.  +.|++++..........+ ..|-.|  +-...+++|    ++++++||+++  
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~n~--~~vl~a~~~~~~~~~~~~~~~~~~y--~~~~~~~Le----~~lA~l~g~e~--   76 (409)
T 3jzl_A            7 AIRKKVETQIDDLQNKTDEIAEFNQ--AKVLDAFQENKVSDFHFHPSTGYGY--DDEGRDTLE----RVYATVFKTEA--   76 (409)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHTTCCGGGGCCCCTTCT--TCHHHHHHH----HHHHHHHTCSE--
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhH--HHHHHHHHHhhhhhhccCCCcCCCC--ChhHHHHHH----HHHHHHhCCCc--
Confidence            5666677777888888999999995  788888876432211111 222221  222345666    57899999986  


Q ss_pred             Ccceee--cCCCchhHHHHHHhhCCc---------------c-----------------------------------c--
Q psy10669         96 WGCNVQ--PYSGSPANFAVCEKALPT---------------N-----------------------------------N--  121 (337)
Q Consensus        96 ~~~~v~--~~Sgt~AN~~v~~aLl~~---------------~-----------------------------------~--  121 (337)
                        +.++  ++||++||..++.+++++               .                                   +  
T Consensus        77 --alv~p~~~sGt~Ai~~al~all~~GD~Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~~~~~v~~~~~g~~d~e~l~~  154 (409)
T 3jzl_A           77 --ALVRPQIISGTHAISTVLFGILRPDDELLYITGQPYDTLEEIVGIRKQGQGSLKDFHIGYSSVPLLENGDVDFPRIAK  154 (409)
T ss_dssp             --EEEETTSCSHHHHHHHHHHHHCCTTCEEEECSSSCCTTHHHHHTSSSSSSSCTGGGTCEEEECCCCTTSCCCHHHHHH
T ss_pred             --EEEECCCccHHHHHHHHHHHhcCCCCEEEEeCCCCcHhHHHHHhcccchhhHHHHcCCEEEEeCCCCCCCcCHHHHHH
Confidence              3444  789999999999988543               0                                   0  


Q ss_pred             c---cccEEEEcCc---cc---ccccChHHHHHHhhh--cCCeEEEeccccccccc---------eeeeec-c-------
Q psy10669        122 A---RFDFLSSGTT---CY---SRCLDYARFRQICDE--TDSIMFADMSHISGLIA---------GVKGVT-K-------  173 (337)
Q Consensus       122 a---~pklII~~~S---~~---~~~~d~~~l~eia~~--~ga~l~vD~AH~~Gli~---------g~~~T~-~-------  173 (337)
                      +   ++|+|++..|   .+   +...|+++|.++|++  +|+++++|++|..++..         .+++|. |       
T Consensus       155 ai~~~tklV~i~~s~g~p~nptg~v~~l~~I~~la~~~~~~~~livD~a~~~~~~~~~p~~~g~Div~~S~sK~lgg~~~  234 (409)
T 3jzl_A          155 KMTPKTKMIGIQRSRGYADRPSFTIEKIKEMIVFVKNINPEVIVFVDNCYGEFVEYQEPPEVGADIIAGSLIKNPGGGLA  234 (409)
T ss_dssp             HCCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTTSSCCSGGGTCSEEEEETTSGGGTTTC
T ss_pred             hccCCCeEEEEECCCCCCCCCcCccccHHHHHHHHHhhCCCCEEEEeCCcccccccCCccccCCeEEEECccccCCccCC
Confidence            0   1578887642   33   344566777789999  99999999999998742         234443 2       


Q ss_pred             -CCchhhh--hHHHHHhhc-cCCCC--CCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCC
Q psy10669        174 -TGEKILY--DYEEKINNA-VFPSL--QGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGG  247 (337)
Q Consensus       174 -~Gg~i~~--~l~~~i~~~-~~p~~--~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~  247 (337)
                       .||++++  ++.+++... ..|++  ..++.+....++..++.     ..+.++++..+|++++++.|.+.|++|..  
T Consensus       235 ~~GG~v~~~~~li~~l~~~~~~~~~g~~~g~~~~~~~~~l~gl~-----~~~~r~~~~~~~a~~la~~L~~~g~~v~p--  307 (409)
T 3jzl_A          235 KTGGYIAGKEALVDLCGYRLTTPGIGREAGASLYSLLEMYQGFF-----LAPHVTAQAIKGARFTAAMLAEFGVEADP--  307 (409)
T ss_dssp             SSCEEEEECHHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHTTCEEES--
T ss_pred             ceEEEEEeCHHHHHHHHHHhccccccccccccHHHHHHHHHHHh-----hHHHHHHHHHHHHHHHHHHHHhCCCcccC--
Confidence             2688776  566666542 23444  12233222222222222     34578999999999999999999999964  


Q ss_pred             CCCe-----EEEEEecCCCcchHHHHHHHhhc---Cceecc
Q psy10669        248 TDVH-----LILIDLRKNKLTGSKVELVLEEI---AIACNK  280 (337)
Q Consensus       248 t~~h-----~v~V~~~~~~~~~~~~~~~L~~~---gI~v~~  280 (337)
                      ..+|     +++|.+++.. ....+.+.|+..   +.++.+
T Consensus       308 ~~~~~~~~~i~~i~l~~~~-~~~~~~~~L~~~~~~~s~~~p  347 (409)
T 3jzl_A          308 VWDAPRTDLIQSVSFHNKE-KMVAFAQAIQAASPVNAHVLP  347 (409)
T ss_dssp             CTTSCCSSSCCEEECSCHH-HHHHHHHHHHHTSSSSTTSCC
T ss_pred             CCCCCCccEEEEEEeCCHH-HHHHHHHHHHhcCcccccCCC
Confidence            3666     8888887433 555666777764   444444

>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}

Probab=99.55  E-value=8e-13  Score=126.81  Aligned_cols=242  Identities=12%  Similarity=0.065  Sum_probs=166.2

Q ss_pred             cceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecC-CCchhH
Q psy10669         31 NGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPY-SGSPAN  109 (337)
Q Consensus        31 ~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~-Sgt~AN  109 (337)
                      ..+.+.|.-.-++|.|.+++...+..        .+   . ....++...+++.+++++|.+.+   ..+.++ ||+.|+
T Consensus        13 ~~~~~~pgp~~~~~~v~~a~~~~~~~--------~~---~-~~~~~~~~~~~~~la~~~~~~~~---~~v~~~~sgt~al   77 (411)
T 3nnk_A           13 SRLLMGPGPINADPRVLRAMSSQLIG--------QY---D-PAMTHYMNEVMALYRGVFRTENR---WTMLVDGTSRAGI   77 (411)
T ss_dssp             CCEEESSSCCCCCHHHHHHHTSCCCC--------TT---C-HHHHHHHHHHHHHHHHHHTCCCS---EEEEEESCHHHHH
T ss_pred             cceeecCCCCCCCHHHHHHhhccccc--------cc---c-HHHHHHHHHHHHHHHHHhCCCCC---cEEEECCCcHHHH
Confidence            34667777777899999999754211        11   1 11234445556799999999864   125555 558898


Q ss_pred             HHHHHhhCCc-------------------------------------------c--c-c-cccEEEEcCc--ccccccCh
Q psy10669        110 FAVCEKALPT-------------------------------------------N--N-A-RFDFLSSGTT--CYSRCLDY  140 (337)
Q Consensus       110 ~~v~~aLl~~-------------------------------------------~--~-a-~pklII~~~S--~~~~~~d~  140 (337)
                      ..++.+++++                                           +  + . ++++|++...  ..+...|+
T Consensus        78 ~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l  157 (411)
T 3nnk_A           78 EAILVSAIRPGDKVLVPVFGRFGHLLCEIARRCRAEVHTIEVPWGEVFTPDQVEDAVKRIRPRLLLTVQGDTSTTMLQPL  157 (411)
T ss_dssp             HHHHHHHCCTTCEEEEEECSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCC
T ss_pred             HHHHHHhcCCCCEEEEecCCchHHHHHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHhhCCCeEEEEeCCCCCcceeccH
Confidence            8888888754                                           0  0 1 3788888642  34688899


Q ss_pred             HHHHHHhhhcCCeEEEeccccccccc---------eeeeeccC------C-chhhh--hHHHHHhhcc------------
Q psy10669        141 ARFRQICDETDSIMFADMSHISGLIA---------GVKGVTKT------G-EKILY--DYEEKINNAV------------  190 (337)
Q Consensus       141 ~~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T~~~------G-g~i~~--~l~~~i~~~~------------  190 (337)
                      ++|.++|+++|+++++|++|..|...         .++++.+|      | |+++.  ++.+.+.+..            
T Consensus       158 ~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~d~~~~s~~K~l~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~  237 (411)
T 3nnk_A          158 AELGEICRRYDALFYTDATASLGGNPLETDVWGLDAVSAGMQKCLGGPSGTSPITLSARMEEAIRRRKCVEEGIRTDAHR  237 (411)
T ss_dssp             TTHHHHHHHHTCEEEEECTTTBTTBCCCTTTTTCSEEECCSTTTTCCCSSEEEEEECHHHHHHHHTTCCCCGGGCCTTCC
T ss_pred             HHHHHHHHHcCCEEEEECCcccCCcccchhccCCcEEEecCccccCCCCceEEEEECHHHHHHHhhcccccccccccccc
Confidence            99999999999999999999988764         12333322      3 44443  4655555321            


Q ss_pred             -----------------------CCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCC
Q psy10669        191 -----------------------FPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGG  247 (337)
Q Consensus       191 -----------------------~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~  247 (337)
                                             .....++++.+.++++..++..+.+...++.++++.++.++|.+.|.+.|+++....
T Consensus       238 gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~  317 (411)
T 3nnk_A          238 DGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLILQEGLDYGIARHKLHGDALVKGIQAMGLETFGDL  317 (411)
T ss_dssp             CCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBCSCG
T ss_pred             cccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCEeCCCc
Confidence                                   011246889999999999888875433688999999999999999999999887521


Q ss_pred             --CCCeEEEEEecCCCcchHHHHHHHhh-cCceeccCc------ccchhh
Q psy10669        248 --TDVHLILIDLRKNKLTGSKVELVLEE-IAIACNKNT------GISLAA  288 (337)
Q Consensus       248 --t~~h~v~V~~~~~~~~~~~~~~~L~~-~gI~v~~~~------girig~  288 (337)
                        ...+++.+.+.. +.+..++.+.|.+ +||.+....      .|||+.
T Consensus       318 ~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~gi~v~~g~~~~~~~~iRi~~  366 (411)
T 3nnk_A          318 KHKMNNVLGVVIPQ-GINGDQARKLMLEDFGIEIGTSFGPLHGKVWRIGT  366 (411)
T ss_dssp             GGBCSSEEEEECCT-TCCHHHHHHHHHHHHSEEEEECCGGGTTTEEEEEC
T ss_pred             ccccccEEEEECCC-CCCHHHHHHHHHHhcCeEEeCccCCCCCCEEEEeC
Confidence              235666666643 4577788887765 599987532      688875

>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*

Probab=99.55  E-value=8.1e-13  Score=126.19  Aligned_cols=244  Identities=9%  Similarity=0.025  Sum_probs=167.7

Q ss_pred             cccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-ch
Q psy10669         29 QINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SP  107 (337)
Q Consensus        29 q~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~  107 (337)
                      +.+.+++.++...++|.|++++...+...          +  +...++....+++.+++++|.++.   .++.+++| +.
T Consensus        17 ~~~~~~~~~g~~~~~~~v~~a~~~~~~~~----------~--~~~~~~~~~~l~~~la~~~g~~~~---~~i~~~~g~t~   81 (393)
T 2huf_A           17 TPNKLLMGPGPSNAPQRVLDAMSRPILGH----------L--HPETLKIMDDIKEGVRYLFQTNNI---ATFCLSASGHG   81 (393)
T ss_dssp             CCCCEECSSSCCCCCHHHHHHTTSCCCCT----------T--SHHHHHHHHHHHHHHHHHHTCCCS---EEEEESSCHHH
T ss_pred             CCCeEEecCCCCCCCHHHHHHHHhhhccC----------C--CHHHHHHHHHHHHHHHHHhCCCCC---cEEEEcCcHHH
Confidence            34567788887788999999987643221          1  112344555566899999998752   14666554 88


Q ss_pred             hHHHHHHhhCCc-------------------------------------------c--c-c-cccEEEEcCcc--ccccc
Q psy10669        108 ANFAVCEKALPT-------------------------------------------N--N-A-RFDFLSSGTTC--YSRCL  138 (337)
Q Consensus       108 AN~~v~~aLl~~-------------------------------------------~--~-a-~pklII~~~S~--~~~~~  138 (337)
                      |+..++.+++++                                           +  + . ++++|++..-.  .+...
T Consensus        82 a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~  161 (393)
T 2huf_A           82 GMEATLCNLLEDGDVILIGHTGHWGDRSADMATRYGADVRVVKSKVGQSLSLDEIRDALLIHKPSVLFLTQGDSSTGVLQ  161 (393)
T ss_dssp             HHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEEC
T ss_pred             HHHHHHHHHhCCCCEEEEECCCcchHHHHHHHHHcCCeeEEEeCCCCCCCCHHHHHHHHhccCCcEEEEEccCCCccccC
Confidence            998888988654                                           0  0 1 36777776322  36788


Q ss_pred             ChHHHHHHhhhcCCeEEEeccccccccc---------eeeeec-c-----CC-chhhh--hHHHHHhhc---cCC-----
Q psy10669        139 DYARFRQICDETDSIMFADMSHISGLIA---------GVKGVT-K-----TG-EKILY--DYEEKINNA---VFP-----  192 (337)
Q Consensus       139 d~~~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T~-~-----~G-g~i~~--~l~~~i~~~---~~p-----  192 (337)
                      |+++|.++|+++|+++++|++|..|...         .++++. |     .| |+++.  ++.+.+...   ..|     
T Consensus       162 ~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~sK~l~g~~G~G~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (393)
T 2huf_A          162 GLEGVGALCHQHNCLLIVDTVASLGGAPMFMDRWEIDAMYTGSQKVLGAPPGITPVSFSHRAVERYKRRNTKVKVYYWDM  241 (393)
T ss_dssp             CCTTHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCSEEECCSSSTTCCCSSCEEEEECHHHHHHHHTCSSCCSCGGGCH
T ss_pred             CHHHHHHHHHHcCCEEEEEcccccCCCCcchhhcCccEEEECCCcccccCCCeEEEEECHHHHHHHhhcCCCCceEEEch
Confidence            8999999999999999999999987654         123332 3     23 45544  566665533   112     


Q ss_pred             --------------CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCC-C-CCeEEEEE
Q psy10669        193 --------------SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGG-T-DVHLILID  256 (337)
Q Consensus       193 --------------~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~-t-~~h~v~V~  256 (337)
                                    ...++++.+.++++..++..+.+...++.++++.++.++|.+.|.+.|+++.... + .++++.+.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~  321 (393)
T 2huf_A          242 SLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACEEGLPALIARHEDCAKRLYRGLQDAGFELYADPKDRLSTVTTIK  321 (393)
T ss_dssp             HHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCTTEEEEE
T ss_pred             HHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCeeccCccccCCcEEEEE
Confidence                          1246889999999988888775434678899999999999999999998876521 1 24466676


Q ss_pred             ecCCCcchHHHHHHHhh-cCceeccCc------ccchhh
Q psy10669        257 LRKNKLTGSKVELVLEE-IAIACNKNT------GISLAA  288 (337)
Q Consensus       257 ~~~~~~~~~~~~~~L~~-~gI~v~~~~------girig~  288 (337)
                      +.. +.+..++.+.|.+ +||.+....      .+||+.
T Consensus       322 ~~~-~~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~Ri~~  359 (393)
T 2huf_A          322 VPQ-GVDWLKAAQYAMKTYLVEISGGLGPTAGQVFRIGL  359 (393)
T ss_dssp             CCT-TCCHHHHHHHHHHHHCEECBCCCGGGTTTEEEEEC
T ss_pred             cCC-CCCHHHHHHHHHHhCCEEEecCcccccCCEEEEEc
Confidence            642 4567788887764 699998532      688876

>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}

Probab=99.54  E-value=2.8e-12  Score=121.57  Aligned_cols=233  Identities=12%  Similarity=0.101  Sum_probs=160.1

Q ss_pred             cceeeeccCCCC--CHHHHHHHhhhhhhc--cCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-
Q psy10669         31 NGIELIASENFT--SLAVLECLGSCLQNK--YSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-  105 (337)
Q Consensus        31 ~~i~l~asen~~--~p~V~~a~~~~l~~~--y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-  105 (337)
                      ..|.|...+|..  +|.|++++...+.+.  ...+++...       ..+++    +.+++++|.+.    .+|.+++| 
T Consensus        27 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~-------~~~lr----~~la~~~g~~~----~~i~~t~g~   91 (360)
T 3hdo_A           27 SWIKLNTNENPYPPSPEVVKAILEELGPDGAALRIYPSAS-------SQKLR----EVAGELYGFDP----SWIIMANGS   91 (360)
T ss_dssp             TSEECSSCCCSSCCCHHHHHHHHHHHTTTCGGGGSCCCSS-------CHHHH----HHHHHHHTCCG----GGEEEESSH
T ss_pred             ceeeccCCCCCCCCCHHHHHHHHHHHhcccchhhcCCCCc-------hHHHH----HHHHHHhCcCc----ceEEEcCCH
Confidence            457777777765  899999998765442  012232211       13444    67889999765    25667666 


Q ss_pred             chhHHHHHHhhCCc-------------------------------------ccc---cccEEEEcCcc--cccccChHHH
Q psy10669        106 SPANFAVCEKALPT-------------------------------------NNA---RFDFLSSGTTC--YSRCLDYARF  143 (337)
Q Consensus       106 t~AN~~v~~aLl~~-------------------------------------~~a---~pklII~~~S~--~~~~~d~~~l  143 (337)
                      ++|+..++.+++++                                     ++.   ++|+|++....  .+...|.+++
T Consensus        92 ~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l  171 (360)
T 3hdo_A           92 DEVLNNLIRAFAAEGEEIGYVHPSYSYYGTLAEVQGARVRTFGLTGDFRIAGFPERYEGKVFFLTTPNAPLGPSFPLEYI  171 (360)
T ss_dssp             HHHHHHHHHHHCCTTCEEEEESSSCTHHHHHHHHHTCEEEEECBCTTSSBTTCCSSBCSSEEEEESSCTTTCCCCCHHHH
T ss_pred             HHHHHHHHHHHhCCCCEEEEcCCChHHHHHHHHHCCCEEEEeeCCCCCCHHHHHhhcCCCEEEEeCCCCCCCCCcCHHHH
Confidence            78988888998764                                     011   26777776333  3689999999


Q ss_pred             HHHhhhcCCeEEEeccccc----cccc--------eeeeec-c----CC---chhhh--hHHHHHhhccCCCCCCCCcHH
Q psy10669        144 RQICDETDSIMFADMSHIS----GLIA--------GVKGVT-K----TG---EKILY--DYEEKINNAVFPSLQGGPHNH  201 (337)
Q Consensus       144 ~eia~~~ga~l~vD~AH~~----Gli~--------g~~~T~-~----~G---g~i~~--~l~~~i~~~~~p~~~g~~~~~  201 (337)
                      .+||+++|+++++|++|..    +.+.        .+++|. |    .|   |+++.  ++.+.+.....+   .++++.
T Consensus       172 ~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~---~~~~~~  248 (360)
T 3hdo_A          172 DELARRCAGMLVLDETYAEFAESNALELVRRHENVVVTRTLSKSYSLAGMRIGLAIARPEVIAALDKIRDH---YNLDRL  248 (360)
T ss_dssp             HHHHHHBSSEEEEECTTGGGSSCCCTHHHHHCSSEEEEEESTTTTSCTTSCCEEEECCHHHHHHHHHHSCS---CCSCHH
T ss_pred             HHHHHHCCCEEEEECChHhhCCcchhHHhccCCCEEEEecchHhhcCCccceeeEeeCHHHHHHHHHhCCC---CCCCHH
Confidence            9999999999999999984    1111        123333 3    12   66655  577777665433   357777


Q ss_pred             HHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccC
Q psy10669        202 AIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKN  281 (337)
Q Consensus       202 ~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~  281 (337)
                      ..+++..++..  ....++.++++.++.++|.+.|.+.|+.+..  .....+++.+.  +.+..++.+.|.+.||.+...
T Consensus       249 ~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~--~~~~~~~~~~~--~~~~~~l~~~l~~~gi~v~~~  322 (360)
T 3hdo_A          249 AQAACVAALRD--QAYLSECCRRIRETREWFTTELRSIGYDVIP--SQGNYLFATPP--DRDGKRVYDGLYARKVLVRHF  322 (360)
T ss_dssp             HHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHHHHHHTTCEECC--CSSSEEEEECT--TCCHHHHHHHHHHTTEECBCC
T ss_pred             HHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCEEcC--CCccEEEEECC--CCCHHHHHHHHHHCCEEEEEC
Confidence            77777777764  2345788999999999999999999998865  45556666654  457888889999999999763


Q ss_pred             c------ccchh
Q psy10669        282 T------GISLA  287 (337)
Q Consensus       282 ~------girig  287 (337)
                      .      .+||+
T Consensus       323 ~~~~~~~~iRis  334 (360)
T 3hdo_A          323 SDPLLAHGMRIS  334 (360)
T ss_dssp             CSTTTTTSEEEE
T ss_pred             CCCCCCCEEEEE
Confidence            3      56665

>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}

Probab=99.54  E-value=8.3e-13  Score=132.19  Aligned_cols=266  Identities=12%  Similarity=0.069  Sum_probs=170.5

Q ss_pred             HHHHHHHHHHhhcccceeeecc--CCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCC--
Q psy10669         17 ELYSLIKKEKHRQINGIELIAS--ENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLD--   92 (337)
Q Consensus        17 ~~~~~~~~e~~rq~~~i~l~as--en~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~--   92 (337)
                      ++++.++++.....+....++|  ..+++|.+.+++...+...+  +++     .......++|..+++.++++||++  
T Consensus        41 ~~~~~~~~~i~l~gnp~~~l~s~~t~~~~~~v~~~l~~~~~~~~--~~~-----~~~p~~~~le~~~~~~la~l~g~~~~  113 (502)
T 3hbx_A           41 AAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMSSINKNY--VDM-----DEYPVTTELQNRCVNMIAHLFNAPLE  113 (502)
T ss_dssp             HHHHHHHHHGGGSCCGGGBTTCCSCCCCCHHHHHHHHHTTTCBT--TCT-----TTCHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred             HHHHHHHHHhccCCCCCceeccccCCCCCHHHHHHHHHHhccCC--CCh-----hcChhHHHHHHHHHHHHHHHhCCCcc
Confidence            4677777665554443322344  35669999999987654432  111     222336789999999999999998  


Q ss_pred             CCCCcceeecCCCchhHHHHHHhhC-----------C-----c-------------------------------------
Q psy10669         93 PEQWGCNVQPYSGSPANFAVCEKAL-----------P-----T-------------------------------------  119 (337)
Q Consensus        93 ~~~~~~~v~~~Sgt~AN~~v~~aLl-----------~-----~-------------------------------------  119 (337)
                      +.+....+..++|+.||+.++.++.           .     .                                     
T Consensus       114 ~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~~~~G~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~d~~  193 (502)
T 3hbx_A          114 EAETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPQ  193 (502)
T ss_dssp             SSCCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEEETTCCHHHHHHHHHTTCEEEEECCBTTBCSCCHH
T ss_pred             cccCCcceecCcHHHHHHHHHHHHHHHHhHHHHhcCCCCCCcEEEEcCCchHHHHHHHHHcCceeEEEecCCCcCcCCHH
Confidence            3222123445677899877666541           0     1                                     


Q ss_pred             ccc-----cccEEEEc-Ccc-cccccChHHHHHHhhhc------CCeEEEeccccccccc-------------e---eee
Q psy10669        120 NNA-----RFDFLSSG-TTC-YSRCLDYARFRQICDET------DSIMFADMSHISGLIA-------------G---VKG  170 (337)
Q Consensus       120 ~~a-----~pklII~~-~S~-~~~~~d~~~l~eia~~~------ga~l~vD~AH~~Gli~-------------g---~~~  170 (337)
                      .+.     +|++|++. +++ .+...|+++|.++|+++      |++++||+||+.++.+             +   +++
T Consensus       194 ~l~~~i~~~t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~~~~~D~v~~  273 (502)
T 3hbx_A          194 QAVDMVDENTICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINV  273 (502)
T ss_dssp             HHHHHCCTTEEEEEEEBSCTTTCCBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEE
T ss_pred             HHHHHHhhCCEEEEEecCCCCCCcccCHHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCcccccccCCCCceEEEE
Confidence            000     26766655 333 46888999999999999      9999999999866531             1   222


Q ss_pred             eccC------C-chh-hh--hH-HHHHhh--ccC------CCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHH
Q psy10669        171 VTKT------G-EKI-LY--DY-EEKINN--AVF------PSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASH  231 (337)
Q Consensus       171 T~~~------G-g~i-~~--~l-~~~i~~--~~~------p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~  231 (337)
                      .+||      | |++ +.  ++ .+.+..  ...      ..+.++.....++++..++..+....+.+++++..+++++
T Consensus       274 s~hK~l~~p~g~G~~~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~al~~lg~~g~~~~~~~~~~~a~~  353 (502)
T 3hbx_A          274 SGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGHEGYRNVMENCRENMIV  353 (502)
T ss_dssp             ETTTTTCCCSSCEEEEESSGGGSCGGGCEEECSSSSCEEECCSCCSCBSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcccccCCCCCeEEEEEeCHHHhhHHhccCcccccCCCCCccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            2232      2 333 32  22 111110  100      1112445555677777787776556788999999999999


Q ss_pred             HHHHHHhCC-CEEecCCCCCeEEEEEecC-CCcchHHHHHHHhhcCceeccCc---------ccchhhh
Q psy10669        232 LSDEMIKRG-YHVVTGGTDVHLILIDLRK-NKLTGSKVELVLEEIAIACNKNT---------GISLAAE  289 (337)
Q Consensus       232 l~~~L~~~G-~~v~~~~t~~h~v~V~~~~-~~~~~~~~~~~L~~~gI~v~~~~---------girig~~  289 (337)
                      |++.|.+.| ++++......+++.+.+.. .+++..++.+.|.+.||.+....         .+||++.
T Consensus       354 l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~p~~~~~~~~lRisv~  422 (502)
T 3hbx_A          354 LREGLEKTERFNIVSKDEGVPLVAFSLKDSSCHTEFEISDMLRRYGWIVPAYTMPPNAQHITVLRVVIR  422 (502)
T ss_dssp             HHHHHHTTTCEEECSCSSSSSEEEEEESSCSSCCHHHHHHHHHTTTCBCCEEECCTTCTTCEEEEEECC
T ss_pred             HHHHHHhCCCEEEEeCCCCceEEEEEecCCCcCCHHHHHHHHHhCCcEEeeccCCcccCCceEEEEEeC
Confidence            999999976 9988632467788888764 34677789999999999875322         4777643

>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}

Probab=99.53  E-value=1.9e-12  Score=122.91  Aligned_cols=243  Identities=11%  Similarity=0.059  Sum_probs=165.8

Q ss_pred             cceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCC-CchhH
Q psy10669         31 NGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYS-GSPAN  109 (337)
Q Consensus        31 ~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~S-gt~AN  109 (337)
                      ......++...++|.|.+++...+.+.          |+ . ...++...+++.+++++|.+.+   .++.+++ |+.|+
T Consensus        20 ~~~l~~~~~~~~~~~v~~a~~~~~~~~----------~~-~-~~~~~~~~~~~~la~~~g~~~~---~~v~~~~g~t~a~   84 (386)
T 2dr1_A           20 KYKLFTAGPVACFPEVLEIMKVQMFSH----------RS-K-EYRKVHMDTVERLREFLEVEKG---EVLLVPSSGTGIM   84 (386)
T ss_dssp             CSEECCSSSCCCCHHHHHHTTSCCCCT----------TS-H-HHHHHHHHHHHHHHHHHTCSSS---EEEEESSCHHHHH
T ss_pred             cceeecCCCcCCcHHHHHHHhcccccc----------cC-H-HHHHHHHHHHHHHHHHhCCCCC---cEEEEeCChHHHH
Confidence            345566777888999999987643321          11 1 1244555556789999999721   2465554 48899


Q ss_pred             HHHHHhhCCc---------------------------------------------cc---ccccEEEEcCc--ccccccC
Q psy10669        110 FAVCEKALPT---------------------------------------------NN---ARFDFLSSGTT--CYSRCLD  139 (337)
Q Consensus       110 ~~v~~aLl~~---------------------------------------------~~---a~pklII~~~S--~~~~~~d  139 (337)
                      ..++.+++++                                             .+   .++++|++..-  ..+...|
T Consensus        85 ~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~  164 (386)
T 2dr1_A           85 EASIRNGVSKGGKVLVTIIGAFGKRYKEVVESNGRKAVVLEYEPGKAVKPEDLDDALRKNPDVEAVTITYNETSTGVLNP  164 (386)
T ss_dssp             HHHHHHHSCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECC
T ss_pred             HHHHHHhhcCCCeEEEEcCCchhHHHHHHHHHhCCceEEEecCCCCCCCHHHHHHHHhcCCCCcEEEEEeecCCcchhCC
Confidence            8888988654                                             11   12678877632  2367789


Q ss_pred             hHHHHHHhhhcCCeEEEeccccccccc---------eeeeec-c-----CC-chhhh--hHHHHHhh-------------
Q psy10669        140 YARFRQICDETDSIMFADMSHISGLIA---------GVKGVT-K-----TG-EKILY--DYEEKINN-------------  188 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T~-~-----~G-g~i~~--~l~~~i~~-------------  188 (337)
                      +++|.++|+++|+++++|++|..|...         .++++. |     .| |+++.  ++.+.+.+             
T Consensus       165 l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~sK~~~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (386)
T 2dr1_A          165 LPELAKVAKEHDKLVFVDAVSAMGGADIKFDKWGLDVVFSSSQKAFGVPPGLAIGAFSERFLEIAEKMPERGWYFDIPLY  244 (386)
T ss_dssp             HHHHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCSEEEEETTSTTCCCSSCEEEEECHHHHHHHTTCTTCCSTTCHHHH
T ss_pred             HHHHHHHHHHcCCeEEEEccccccCccccccccCCcEEEEeccccccCCCceEEEEECHHHHHHHhcCCCCceEEeHHHH
Confidence            999999999999999999999988763         133333 2     23 56654  45554421             


Q ss_pred             --cc--CCCCCCCCcHHHHHHHHHHHHHHhch-hhHHHHHHHHHHHHHHHHHHHhCCCEEecCC--CCCeEEEEEecCCC
Q psy10669        189 --AV--FPSLQGGPHNHAIGAIATAMLQAQSD-EFKSYQAQVKANASHLSDEMIKRGYHVVTGG--TDVHLILIDLRKNK  261 (337)
Q Consensus       189 --~~--~p~~~g~~~~~~iaala~a~~e~~~~-~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~--t~~h~v~V~~~~~~  261 (337)
                        ..  .....++++++..+++..++..+.+. ..++.++++.++.+++.+.|.+.|+++....  ...+++++.+.. +
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~-~  323 (386)
T 2dr1_A          245 VKYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMVREGVREIGLDILAEPGHESPTITAVLTPP-G  323 (386)
T ss_dssp             HHHHHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCTTCBCSSEEEEECCT-T
T ss_pred             HHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeeCcCccccCCceEEEEcCC-C
Confidence              00  01224578888899888888876432 3678899999999999999999998886521  136777787753 4


Q ss_pred             cchHHHHHHHhhcCceeccCc------ccchhhh
Q psy10669        262 LTGSKVELVLEEIAIACNKNT------GISLAAE  289 (337)
Q Consensus       262 ~~~~~~~~~L~~~gI~v~~~~------girig~~  289 (337)
                      .+..++.+.|.+.||.+.+..      .+||+..
T Consensus       324 ~~~~~~~~~l~~~gi~v~~~~~~~~~~~iRi~~~  357 (386)
T 2dr1_A          324 IKGDEVYEAMRKRGFELAKGYGSVKEKTFRIGHM  357 (386)
T ss_dssp             CCHHHHHHHHHHTTEECEECCGGGTTTEEEEECC
T ss_pred             CCHHHHHHHHHHCCeEEecCccccCCCEEEEECC
Confidence            467788888887799987632      6777644

>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}

Probab=99.53  E-value=2.5e-12  Score=123.55  Aligned_cols=242  Identities=10%  Similarity=0.073  Sum_probs=165.6

Q ss_pred             cceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCccee-ecCCCchhH
Q psy10669         31 NGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNV-QPYSGSPAN  109 (337)
Q Consensus        31 ~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v-~~~Sgt~AN  109 (337)
                      ..+++.+.-..+++.|.+++.....     +   .  +  .....++...+++.+++++|.+++   ..+ ...||+.|+
T Consensus        11 ~~~~~~p~p~~~~~~v~~a~~~~~~-----~---~--~--~~~~~~~~~~l~~~la~~~g~~~~---~~~~~~~s~t~al   75 (416)
T 3isl_A           11 LRTIMTPGPVEVDPRVLRVMSTPVV-----G---Q--F--DPAFTGIMNETMEMLRELFQTKNR---WAYPIDGTSRAGI   75 (416)
T ss_dssp             CCEECSSSSCCCCHHHHHHTTSCCC-----C---T--T--SHHHHHHHHHHHHHHHHHTTCCCS---EEEEEESCHHHHH
T ss_pred             cceeecCCCcCcCHHHHHHhcccCC-----C---C--c--cHHHHHHHHHHHHHHHHHhCCCCC---cEEEecCcHHHHH
Confidence            4566778878889999998865211     1   1  1  112245555566899999998863   134 345667998


Q ss_pred             HHHHHhhCCc-------------------------------------------c--c--ccccEEEEcCcc--cccccCh
Q psy10669        110 FAVCEKALPT-------------------------------------------N--N--ARFDFLSSGTTC--YSRCLDY  140 (337)
Q Consensus       110 ~~v~~aLl~~-------------------------------------------~--~--a~pklII~~~S~--~~~~~d~  140 (337)
                      ..++.+++++                                           +  +  .++++|++..-.  .+...|+
T Consensus        76 ~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l  155 (416)
T 3isl_A           76 EAVLASVIEPEDDVLIPIYGRFGYLLTEIAERYGANVHMLECEWGTVFDPEDIIREIKKVKPKIVAMVHGETSTGRIHPL  155 (416)
T ss_dssp             HHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCC
T ss_pred             HHHHHHhcCCCCEEEEecCCcccHHHHHHHHhcCCeeEEEecCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCceecCH
Confidence            8888888764                                           0  0  136888776322  4688899


Q ss_pred             HHHHHHhhhcCCeEEEeccccccccc---------eeeeeccC------C-chhhh--hHHHHHhhc-------------
Q psy10669        141 ARFRQICDETDSIMFADMSHISGLIA---------GVKGVTKT------G-EKILY--DYEEKINNA-------------  189 (337)
Q Consensus       141 ~~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T~~~------G-g~i~~--~l~~~i~~~-------------  189 (337)
                      ++|.++|+++|+++++|++|+.|.+.         .++++.+|      | |+++.  ++.+.+.+.             
T Consensus       156 ~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~l~g~~g~g~~~~~~~~~~~~~~~~~~~~Gw~~~~~~  235 (416)
T 3isl_A          156 KAIGEACRTEDALFIVDAVATIGGCEVKVDEWKIDAAIGGTQKCLSVPSGMAPITYNERVADVIAARKKVERGIATQADR  235 (416)
T ss_dssp             HHHHHHHHHTTCEEEEECTTTTTTSCCCTTTTTCSEEECCSSSTTCCCSSEEEEEECHHHHHHHHTC-------------
T ss_pred             HHHHHHHHHcCCEEEEECCccccCCCcchhhcCCCEEEecCccccCCCCCeEEEEECHHHHHHhhccccccccccccccc
Confidence            99999999999999999999988764         12333322      2 44433  455555421             


Q ss_pred             ------------------------cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEec
Q psy10669        190 ------------------------VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVT  245 (337)
Q Consensus       190 ------------------------~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~  245 (337)
                                              ......++++.+.++++..++..+.....++.++++.++.++|.+.|.+.|+++..
T Consensus       236 ~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~  315 (416)
T 3isl_A          236 AALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEEGLETRFERHRHHEAALAAGIKAMGLRLFG  315 (416)
T ss_dssp             -----CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBCS
T ss_pred             hhccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCEecc
Confidence                                    11223578899999999999888754336899999999999999999999998875


Q ss_pred             CC--CCCeEEEEEecCCCcchHHHHHHHhh-cCceeccCc------ccchhh
Q psy10669        246 GG--TDVHLILIDLRKNKLTGSKVELVLEE-IAIACNKNT------GISLAA  288 (337)
Q Consensus       246 ~~--t~~h~v~V~~~~~~~~~~~~~~~L~~-~gI~v~~~~------girig~  288 (337)
                      ..  ...+++.+.+.. +.+..++.+.|.+ +||.+....      .+||+.
T Consensus       316 ~~~~~~~~~~~~~~~~-~~~~~~l~~~L~~~~gi~v~~g~~~~~~~~iRi~~  366 (416)
T 3isl_A          316 DDSCKMPVVTCVEIPG-GIDGESVRDMLLAQFGIEIASSFGPLAGKIWRIGT  366 (416)
T ss_dssp             CGGGBCTTEEEEECCT-TCCHHHHHHHHHHHHCEECBCCCSTTTTTEEEEEC
T ss_pred             CccccCCcEEEEeCCC-CCCHHHHHHHHHHhCCEEEecCCCCCCCCEEEEec
Confidence            21  124566666642 4577888888865 599998532      688875

>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}

Probab=99.53  E-value=1.8e-13  Score=135.86  Aligned_cols=239  Identities=12%  Similarity=0.098  Sum_probs=156.6

Q ss_pred             CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCC-CCCCcceeecCCCchhHHHHHHhhCC---
Q psy10669         43 SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLD-PEQWGCNVQPYSGSPANFAVCEKALP---  118 (337)
Q Consensus        43 ~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~-~~~~~~~v~~~Sgt~AN~~v~~aLl~---  118 (337)
                      ++.+.+++...+. ++...++..  +.......++|..+++.++++||.+ .+.+  .+..++|+.||..++.++.+   
T Consensus        77 ~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~l~~~~~~~la~~~g~~~~~~~--~~~~~ggt~a~~~a~~a~~~~~~  151 (497)
T 3mc6_A           77 GDDLIHLQTIAYE-KYCVANQLH--PDVFPAVRKMESEVVSMVLRMFNAPSDTGC--GTTTSGGTESLLLACLSAKMYAL  151 (497)
T ss_dssp             CHHHHHHHHHHHH-HTSSCBTTC--TTTCHHHHHHHHHHHHHHHHHTTCCTTTCC--EEEESSHHHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHH-HHhhcCCCC--cccChHHHHHHHHHHHHHHHHhCCCCCCCe--EEEcCcHHHHHHHHHHHHHHHHH
Confidence            4777777766533 333222222  2333445678888888999999998 2222  34445558898888777631   


Q ss_pred             -------c-----------------------------c---------cc-----cccEEEEcCcc--cccccChHHHHHH
Q psy10669        119 -------T-----------------------------N---------NA-----RFDFLSSGTTC--YSRCLDYARFRQI  146 (337)
Q Consensus       119 -------~-----------------------------~---------~a-----~pklII~~~S~--~~~~~d~~~l~ei  146 (337)
                             +                             .         +.     +|++|++...+  ++...|+++|.+|
T Consensus       152 ~~~g~~~~~Vi~~~~~h~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~l~~i~~l  231 (497)
T 3mc6_A          152 HHRGITEPEIIAPVTAHAGFDKAAYYFGMKLRHVELDPTTYQVDLGKVKKFINKNTVLLVGSAPNFPHGIADDIEGLGKI  231 (497)
T ss_dssp             HHSCCSSCEEEEETTSCHHHHHHHHHSCCEEEEECBCTTTCSBCTTTTGGGCCSSEEEEEEETTCTTTCCCCSCTTTTTH
T ss_pred             hcCCCCCceEEEeCCccHHHHHHHHHcCCeEEEEecCcccCcCCHHHHHHHHhhCCEEEEEECCCCCCCcCCCHHHHHHH
Confidence                   1                             1         11     26777776333  5788999999999


Q ss_pred             hhhcCCeEEEeccccccccc------------------e---ee-eeccC------Cchhhh--hHHHHHhhcc------
Q psy10669        147 CDETDSIMFADMSHISGLIA------------------G---VK-GVTKT------GEKILY--DYEEKINNAV------  190 (337)
Q Consensus       147 a~~~ga~l~vD~AH~~Gli~------------------g---~~-~T~~~------Gg~i~~--~l~~~i~~~~------  190 (337)
                      |+++|++|+||++|+.+++.                  |   ++ +++|.      .|+++.  +.........      
T Consensus       232 a~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  311 (497)
T 3mc6_A          232 AQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVPGVTSISCDTHKYGFAPKGSSVIMYRNSDLRMHQYYVNPAWTG  311 (497)
T ss_dssp             HHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCSTTSTTCCEEEEETTTTTCCCSSCEEEECSSHHHHTTTSCCBTTCTT
T ss_pred             HHHhCCEEEEECcchhhhhhhhhhhcccCCccccccCCCCcEEEECchhhcCCCCCceeEEecCHHHHhhhhcccccccC
Confidence            99999999999999854321                  1   22 23331      244443  2322221111      


Q ss_pred             ----CCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCEEecCCCCCeEEEEEecCCCcch
Q psy10669        191 ----FPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYHVVTGGTDVHLILIDLRKNKLTG  264 (337)
Q Consensus       191 ----~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~v~~~~t~~h~v~V~~~~~~~~~  264 (337)
                          .|.+.|+.....++++.+++..+....++++.+++.+++++|++.|.+.  |+++++. ....+  +.+...+.++
T Consensus       312 ~~~~~~~~~g~~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~-~~~~~--v~~~~~~~~~  388 (497)
T 3mc6_A          312 GLYGSPTLAGSRPGAIVVGCWATMVNMGENGYIESCQEIVGAAMKFKKYIQENIPDLDIMGN-PRYSV--ISFSSKTLNI  388 (497)
T ss_dssp             SCBCCSSSCSSCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCEECSC-CCSSE--EEEECTTTTH
T ss_pred             CCcCCcCcccCCcchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecC-CCeeE--EEEeCCCCCH
Confidence                2223445555668888888887766677899999999999999999995  9998753 22333  4444556688


Q ss_pred             HHHHHHHhhcCceeccCc---ccchhhh
Q psy10669        265 SKVELVLEEIAIACNKNT---GISLAAE  289 (337)
Q Consensus       265 ~~~~~~L~~~gI~v~~~~---girig~~  289 (337)
                      .++.+.|.+.||.++...   ++|++..
T Consensus       389 ~~l~~~L~~~Gi~v~~~~~~~~~ri~~~  416 (497)
T 3mc6_A          389 HELSDRLSKKGWHFNALQKPVALHMAFT  416 (497)
T ss_dssp             HHHHHHHHTTTCBCEECCSSCCEEEECC
T ss_pred             HHHHHHHHhCCEEEecCCCCCeEEEEEe
Confidence            999999999999987644   6788765

>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3

Probab=99.53  E-value=7e-13  Score=124.71  Aligned_cols=243  Identities=14%  Similarity=0.025  Sum_probs=158.6

Q ss_pred             ceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCcc-chHHHHHHHHHHHHHhhcCCCCCCCcceeecC-CCchhH
Q psy10669         32 GIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGN-QFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPY-SGSPAN  109 (337)
Q Consensus        32 ~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~-~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~-Sgt~AN  109 (337)
                      .+++.+.-.-.+|.|++++...+      +   .++.... ....++    ++.+++++|.+. ++ ..+.++ ||+.|+
T Consensus         5 ~~~~~~gp~~~~~~v~~a~~~~~------~---~~~~~~~~~~~~~l----~~~la~~~g~~~-~~-~~v~~~~g~t~a~   69 (366)
T 1m32_A            5 YLLLTPGPLTTSRTVKEAMLFDS------C---TWDDDYNIGVVEQI----RQQLTALATASE-GY-TSVLLQGSGSYAV   69 (366)
T ss_dssp             CEECSSSSCCCCHHHHHTTCCCC------C---TTSHHHHTTTHHHH----HHHHHHHHCSSS-SE-EEEEEESCHHHHH
T ss_pred             cccccCCCcCCCHHHHHHHhhhh------c---CCCHHHHHHHHHHH----HHHHHHHhCCCC-cC-cEEEEecChHHHH
Confidence            45666665557999999987531      1   1110001 223344    468889999421 11 135554 458899


Q ss_pred             HHHHHhhCCc-------------------------------------------c--cc---cccEEEEcCccc--ccccC
Q psy10669        110 FAVCEKALPT-------------------------------------------N--NA---RFDFLSSGTTCY--SRCLD  139 (337)
Q Consensus       110 ~~v~~aLl~~-------------------------------------------~--~a---~pklII~~~S~~--~~~~d  139 (337)
                      ..++.+++++                                           +  +.   ++++|++....+  +...|
T Consensus        70 ~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~  149 (366)
T 1m32_A           70 EAVLGSALGPQDKVLIVSNGAYGARMVEMAGLMGIAHHAYDCGEVARPDVQAIDAILNADPTISHIAMVHSETTTGMLNP  149 (366)
T ss_dssp             HHHHHHSCCTTCCEEEEESSHHHHHHHHHHHHHTCCEEEEECCTTSCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECC
T ss_pred             HHHHHHhcCCCCeEEEEeCCCccHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcCCCeEEEEEecccCCcceecC
Confidence            8888888643                                           0  00   256776653333  68889


Q ss_pred             hHHHHHHhhhcCCeEEEeccccccccc---------eeeeec-c-----CC-chhhh--hHHHHHhhccCCC--------
Q psy10669        140 YARFRQICDETDSIMFADMSHISGLIA---------GVKGVT-K-----TG-EKILY--DYEEKINNAVFPS--------  193 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T~-~-----~G-g~i~~--~l~~~i~~~~~p~--------  193 (337)
                      +++|.++|+++|+++++|++|+.|...         .++++. |     .| |+++.  ++.+.+.....+.        
T Consensus       150 l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (366)
T 1m32_A          150 IDEVGALAHRYGKTYIVDAMSSFGGIPMDIAALHIDYLISSANKCIQGVPGFAFVIAREQKLAACKGHSRSLSLDLYAQW  229 (366)
T ss_dssp             HHHHHHHHHHHTCEEEEECTTTTTTSCCCTTTTTCSEEEEESSSTTCCCSSEEEEEEEHHHHTTCTTCCSCSTTCHHHHH
T ss_pred             HHHHHHHHHHcCCEEEEECCccccCcCccccccCccEEEecCcccccCCCceEEEEECHHHHHhhcCCCCCccccHHHHH
Confidence            999999999999999999999987654         123333 3     24 66654  4544443321111        


Q ss_pred             ---------CCCCCcHHHHHHHHHHHHHHhchh-hHHHHHHHHHHHHHHHHHHHhCCCEEecCC--CCCeEEEEEecC-C
Q psy10669        194 ---------LQGGPHNHAIGAIATAMLQAQSDE-FKSYQAQVKANASHLSDEMIKRGYHVVTGG--TDVHLILIDLRK-N  260 (337)
Q Consensus       194 ---------~~g~~~~~~iaala~a~~e~~~~~-~~~y~~~v~~na~~l~~~L~~~G~~v~~~~--t~~h~v~V~~~~-~  260 (337)
                               ..++++++.++++..++..+.+.. +++.++++.++.++|.+.|.+.|+++....  ..+.++++.+.. .
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (366)
T 1m32_A          230 RCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRALGFNTLLDDELHSPIITAFYSPEDP  309 (366)
T ss_dssp             HHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCSSEEEEECCCCT
T ss_pred             hhhcccCCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHHCCCeeccCchhcCceEEEEEcCccC
Confidence                     125788888989888888875432 578899999999999999999888876421  124477777753 1


Q ss_pred             CcchHHHHHHHhhcCceeccCc-----ccchhhh
Q psy10669        261 KLTGSKVELVLEEIAIACNKNT-----GISLAAE  289 (337)
Q Consensus       261 ~~~~~~~~~~L~~~gI~v~~~~-----girig~~  289 (337)
                      +.+..++.+.|.+.||.+.+..     .+||+..
T Consensus       310 ~~~~~~~~~~l~~~gi~v~~~~~~~~~~iRi~~~  343 (366)
T 1m32_A          310 QYRFSEFYRRLKEQGFVIYPGKVSQSDCFRIGNI  343 (366)
T ss_dssp             TCCHHHHHHHHHHTTEECEECCCSSSCEEEEECC
T ss_pred             CCCHHHHHHHHHHCCEEEECCcCCCCCEEEEecC
Confidence            4577888888888899987532     6787644

>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*

Probab=99.53  E-value=2.5e-12  Score=120.34  Aligned_cols=240  Identities=10%  Similarity=0.046  Sum_probs=164.1

Q ss_pred             eeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCC-CCCCcceeecCCC-chhHH
Q psy10669         33 IELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLD-PEQWGCNVQPYSG-SPANF  110 (337)
Q Consensus        33 i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~-~~~~~~~v~~~Sg-t~AN~  110 (337)
                      +++.|...-++|.|++++...+.+        .+   +. ...+.+..+++.+++++|.+ .+   ..+.+++| +.|+.
T Consensus         2 ~~~~~gp~~~~~~v~~a~~~~~~~--------~~---~~-~~~~~~~~l~~~la~~~g~~~~~---~~v~~t~g~t~a~~   66 (353)
T 2yrr_A            2 LLLTPGPTPIPERVQKALLRPMRG--------HL---DP-EVLRVNRAIQERLAALFDPGEGA---LVAALAGSGSLGME   66 (353)
T ss_dssp             EECSSSSCCCCHHHHGGGGSCCCC--------TT---CH-HHHHHHHHHHHHHHHHHCCCTTC---EEEEESSCHHHHHH
T ss_pred             ccCCCCCCCCCHHHHHHHhccccc--------cc---CH-HHHHHHHHHHHHHHHHhCCCCCC---ceEEEcCCcHHHHH
Confidence            467788888899999998765332        11   11 22344555668999999986 11   25777666 78888


Q ss_pred             HHHHhhCCc-----------------------------------------cc---c-cccEEEEcCccc--ccccChHHH
Q psy10669        111 AVCEKALPT-----------------------------------------NN---A-RFDFLSSGTTCY--SRCLDYARF  143 (337)
Q Consensus       111 ~v~~aLl~~-----------------------------------------~~---a-~pklII~~~S~~--~~~~d~~~l  143 (337)
                      .++.+++++                                         +.   . +|++|++....+  +...|+++|
T Consensus        67 ~~~~~~~~d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~i  146 (353)
T 2yrr_A           67 AGLANLDRGPVLVLVNGAFSQRVAEMAALHGLDPEVLDFPPGEPVDPEAVARALKRRRYRMVALVHGETSTGVLNPAEAI  146 (353)
T ss_dssp             HHHHTCSCCCEEEEECSHHHHHHHHHHHHTTCCEEEEECCTTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHH
T ss_pred             HHHHHhcCCcEEEEcCCCchHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHHhCCCCEEEEEccCCCcceecCHHHH
Confidence            877777532                                         00   1 367887764333  678899999


Q ss_pred             HHHhhhcCCeEEEeccccccccc---------eee-eecc-----CC-chhhh--hHHHHHhh--cc------------C
Q psy10669        144 RQICDETDSIMFADMSHISGLIA---------GVK-GVTK-----TG-EKILY--DYEEKINN--AV------------F  191 (337)
Q Consensus       144 ~eia~~~ga~l~vD~AH~~Gli~---------g~~-~T~~-----~G-g~i~~--~l~~~i~~--~~------------~  191 (337)
                      .++|+++|+++++|++|..|...         .++ +++|     .| |+++.  ++.+.+..  ..            .
T Consensus       147 ~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  226 (353)
T 2yrr_A          147 GALAKEAGALFFLDAVTTLGMLPFSMRAMGVDYAFTGSQKCLSAPPGLAPIAASLEARKAFTGKRGWYLDLARVAEHWER  226 (353)
T ss_dssp             HHHHHHHTCEEEEECTTTTTTSCCCHHHHTCSEEECCTTSTTCCCSSCEEEEECHHHHHHCCCCSCSTTCHHHHHHHHTT
T ss_pred             HHHHHHcCCeEEEEcCcccccccccccccCceEEEecCcccccCCCceEEEEECHHHHHHhccCCCccccHHHHhhhhhc
Confidence            99999999999999999877654         122 2333     23 55544  45554431  00            0


Q ss_pred             CCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCC-CCCeEEEEEecCCCcchHHHHHH
Q psy10669        192 PSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGG-TDVHLILIDLRKNKLTGSKVELV  270 (337)
Q Consensus       192 p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~-t~~h~v~V~~~~~~~~~~~~~~~  270 (337)
                      ....++++.+.++++..++..+.+..+++.++++.++.++|.+.|.+.|+++.... ..++++++.+. .+.+..++.+.
T Consensus       227 ~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  305 (353)
T 2yrr_A          227 GGYHHTTPVLLHYALLEALDLVLEEGVAARERRAREVYAWVLEELKARGFRPYPKASPLPTVLVVRPP-EGVDADRLVRA  305 (353)
T ss_dssp             CCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCEESCSSSBCTTEEEEECC-TTCCHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCCccccCccCCCeEEEEECC-CCCCHHHHHHH
Confidence            12245788888888888887765434678899999999999999999999887521 14677777764 24577888888


Q ss_pred             HhhcCceeccCc------ccchhh
Q psy10669        271 LEEIAIACNKNT------GISLAA  288 (337)
Q Consensus       271 L~~~gI~v~~~~------girig~  288 (337)
                      |.+.||.+.+..      .+||+.
T Consensus       306 l~~~gi~v~~g~~~~~~~~iRi~~  329 (353)
T 2yrr_A          306 LYAEGVAVAGGIGPTRGQVLRLGL  329 (353)
T ss_dssp             HHHTTEECEECCGGGTTTCEEEEC
T ss_pred             HHHCCEEEeCCccccCCCeEEEec
Confidence            988899987532      678875

>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*

Probab=99.52  E-value=2.9e-12  Score=122.26  Aligned_cols=235  Identities=10%  Similarity=-0.008  Sum_probs=158.9

Q ss_pred             eccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecC-CCchhHHHHHH
Q psy10669         36 IASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPY-SGSPANFAVCE  114 (337)
Q Consensus        36 ~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~-Sgt~AN~~v~~  114 (337)
                      .++....+|.|++++...+.+        .+   +. ...+....+++.+++++|.+..    ++.++ ||+.|+..++.
T Consensus        14 ~~~~~~~~~~v~~a~~~~~~~--------~~---~~-~~~~~~~~l~~~la~~~g~~~~----~v~~t~g~t~a~~~~~~   77 (392)
T 2z9v_A           14 TAGPVNAYPEVLRGLGRTVLY--------DY---DP-AFQLLYEKVVDKAQKAMRLSNK----PVILHGEPVLGLEAAAA   77 (392)
T ss_dssp             SSSCCCCCHHHHHHTTSCCCC--------TT---SH-HHHHHHHHHHHHHHHHTTCSSC----CEEESSCTHHHHHHHHH
T ss_pred             cCCCcCCCHHHHHHHhccccc--------cc---cH-HHHHHHHHHHHHHHHHhCCCCC----EEEEeCCchHHHHHHHH
Confidence            344556699999998764332        11   11 1223334456788999998742    46664 55889988888


Q ss_pred             hhCCc---------------------------------------------cc---ccccEEEEcCccc--ccccChHHHH
Q psy10669        115 KALPT---------------------------------------------NN---ARFDFLSSGTTCY--SRCLDYARFR  144 (337)
Q Consensus       115 aLl~~---------------------------------------------~~---a~pklII~~~S~~--~~~~d~~~l~  144 (337)
                      +++++                                             .+   .++++|++..-.+  +...|+++|.
T Consensus        78 ~~~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~  157 (392)
T 2z9v_A           78 SLISPDDVVLNLASGVYGKGFGYWAKRYSPHLLEIEVPYNEAIDPQAVADMLKAHPEITVVSVCHHDTPSGTINPIDAIG  157 (392)
T ss_dssp             HHCCTTCCEEEEESSHHHHHHHHHHHHHCSCEEEEECCTTSCCCHHHHHHHHHHCTTCCEEEEESEEGGGTEECCHHHHH
T ss_pred             HhcCCCCEEEEecCCcccHHHHHHHHHcCCceEEeeCCCCCCCCHHHHHHHHhcCCCCcEEEEeccCCCCceeccHHHHH
Confidence            88654                                             01   1367887764333  6788999999


Q ss_pred             HHhhhcCCeEEEeccccccccc---------eeeeec-c-----CC-chhhh--hHHHHHhhcc----------------
Q psy10669        145 QICDETDSIMFADMSHISGLIA---------GVKGVT-K-----TG-EKILY--DYEEKINNAV----------------  190 (337)
Q Consensus       145 eia~~~ga~l~vD~AH~~Gli~---------g~~~T~-~-----~G-g~i~~--~l~~~i~~~~----------------  190 (337)
                      ++|+++|+++++|++|+.|...         .++++. |     .| |+++.  ++.+.+.+..                
T Consensus       158 ~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~sK~~~~~~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~  237 (392)
T 2z9v_A          158 ALVSAHGAYLIVDAVSSFGGMKTHPEDCKADIYVTGPNKCLGAPPGLTMMGVSERAWAKMKANPLAPRASMLSIVDWENA  237 (392)
T ss_dssp             HHHHHTTCEEEEECTTTBTTBSCCGGGGTCSEEEECSSSTTCCCSCCEEEEECHHHHHHHHTCTTSCCSSTTCSGGGTTT
T ss_pred             HHHHHcCCeEEEEcccccCCcccccccccceEEEecCcccccCCCceeEEEECHHHHHHhhhccCCCCceeccHHHHHhh
Confidence            9999999999999999987654         123333 3     23 45544  4555554310                


Q ss_pred             ---CCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEec-CC--CCCeEEEEEecCCCcch
Q psy10669        191 ---FPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVT-GG--TDVHLILIDLRKNKLTG  264 (337)
Q Consensus       191 ---~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~-~~--t~~h~v~V~~~~~~~~~  264 (337)
                         .....++++.+.++++..++..+.+..+++.+++..++.++|.+.|.+.|+++.. ..  ...+++.+.+.. +.+.
T Consensus       238 ~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~  316 (392)
T 2z9v_A          238 WSRDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHALTAKAMRAGVTAMGLSVWAASDSIASPTTTAVRTPD-GVDE  316 (392)
T ss_dssp             TSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSSSGGGBCTTEEEEECCT-TCCH
T ss_pred             hcccCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHcCCeeccCCccccCCceEEEECCC-CCCH
Confidence               0122577888888888888877654336788999999999999999988888764 21  146777777642 4567


Q ss_pred             HHHHHHHhhc-CceeccCc------ccchh
Q psy10669        265 SKVELVLEEI-AIACNKNT------GISLA  287 (337)
Q Consensus       265 ~~~~~~L~~~-gI~v~~~~------girig  287 (337)
                      .++.+.|.+. ||.+....      .+||+
T Consensus       317 ~~l~~~L~~~~gi~v~~g~~~~~~~~lRi~  346 (392)
T 2z9v_A          317 KALRQAARARYGVVFSSGRGETLGKLTRIG  346 (392)
T ss_dssp             HHHHHHHHHHHCEECEECCGGGTTTEEEEE
T ss_pred             HHHHHHHHhcCCEEEecCCCCCCCCeEEEe
Confidence            8888888875 99987532      68887

>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*

Probab=99.52  E-value=1.5e-12  Score=123.44  Aligned_cols=231  Identities=16%  Similarity=0.123  Sum_probs=154.8

Q ss_pred             cCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHhh
Q psy10669         38 SENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEKA  116 (337)
Q Consensus        38 sen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~aL  116 (337)
                      +....+|.|++++...+.+.|  +.+++.+..+.. ..+.....++.+++++|.+.    .++.+++| +.|+..++.++
T Consensus         9 ~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~l~~~la~~~g~~~----~~v~~~~g~t~a~~~~~~~~   81 (384)
T 1eg5_A            9 ATTRVDDRVLEEMIVFYREKY--GNPNSAHGMGIE-ANLHMEKAREKVAKVLGVSP----SEIFFTSCATESINWILKTV   81 (384)
T ss_dssp             TCCCCCHHHHHHHHHHHHTCC--CCTTCSSHHHHH-HHHHHHHHHHHHHHHHTSCG----GGEEEESCHHHHHHHHHHHH
T ss_pred             ccCCCCHHHHHHHHHHHHhcC--CCCccccHHHHH-HHHHHHHHHHHHHHHcCCCC----CeEEEECCHHHHHHHHHHhh
Confidence            344679999999988766544  334332211211 12333445678999999875    24666555 78988888888


Q ss_pred             C----Cc------------------------------------------cc--c---cccEEEEcCcc--cccccChHHH
Q psy10669        117 L----PT------------------------------------------NN--A---RFDFLSSGTTC--YSRCLDYARF  143 (337)
Q Consensus       117 l----~~------------------------------------------~~--a---~pklII~~~S~--~~~~~d~~~l  143 (337)
                      .    ++                                          ++  +   ++++|++..-.  .+...|+++|
T Consensus        82 ~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i  161 (384)
T 1eg5_A           82 AETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDSRGVVKLEELEKLVDEDTFLVSIMAANNEVGTIQPVEDV  161 (384)
T ss_dssp             HHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCTTSCBCHHHHHHHCCTTEEEEEEESBCTTTCBBCCHHHH
T ss_pred             hhhccCCCCEEEECCCCchHHHHHHHHHHhcCCEEEEEccCCCCccCHHHHHHHhCCCCeEEEEECCCCCcccccCHHHH
Confidence            6    33                                          00  0   26777776333  3688899999


Q ss_pred             HHHhhhcC--CeEEEeccccccccc---------eeeeec-c----CC-chhhh--hHHHHHhhccC------CCCCCCC
Q psy10669        144 RQICDETD--SIMFADMSHISGLIA---------GVKGVT-K----TG-EKILY--DYEEKINNAVF------PSLQGGP  198 (337)
Q Consensus       144 ~eia~~~g--a~l~vD~AH~~Gli~---------g~~~T~-~----~G-g~i~~--~l~~~i~~~~~------p~~~g~~  198 (337)
                      .++|+++|  +++++|++|..|...         .++++. |    .| |+++.  ++  .+.+.+.      ....+++
T Consensus       162 ~~l~~~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~sK~~g~~G~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  239 (384)
T 1eg5_A          162 TRIVKKKNKETLVHVDAVQTIGKIPFSLEKLEVDYASFSAHKFHGPKGVGITYIRKGV--PIRPLIHGGGQERGLRSGTQ  239 (384)
T ss_dssp             HHHHHHHCTTCEEEEECTTTTTTSCCCCTTTCCSEEEEEGGGGTSCTTCEEEEECTTS--CCCCSBCSSCTTTTTBCSCC
T ss_pred             HHHHHhcCCceEEEEEhhhhcCCcccCchhcCCCEEEecHHHhcCCCceEEEEEcCCC--ccccccccCcccccccCCCC
Confidence            99999999  999999999876433         123332 2    34 55554  33  1222221      1235678


Q ss_pred             cHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCC--CCCeEEEEEecCCCcchHHHHHHHhhcCc
Q psy10669        199 HNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGG--TDVHLILIDLRKNKLTGSKVELVLEEIAI  276 (337)
Q Consensus       199 ~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~--t~~h~v~V~~~~~~~~~~~~~~~L~~~gI  276 (337)
                      +.+.++++..++.... ...++.++++.++.++|.+.|.+.|+++....  ...+.+.+.+.  +.+..++.+.|.+.||
T Consensus       240 ~~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~gi  316 (384)
T 1eg5_A          240 NVPGIVGAARAMEIAV-EELSEAAKHMEKLRSKLVSGLMNLGAHIITPLEISLPNTLSVSFP--NIRGSTLQNLLSGYGI  316 (384)
T ss_dssp             CHHHHHHHHHHHHHHH-HTHHHHHHHHHHHHHHHHHHHHTTTCEECSCTTSBCTTEEEEECT--TCCHHHHHHHHHHTTE
T ss_pred             ChHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHhCCCCeEEeCCcccCCCCEEEEEeC--CCCHHHHHHHHhhCCe
Confidence            8888888888887753 45688899999999999999999999886521  12345555554  3467888889988999


Q ss_pred             eecc
Q psy10669        277 ACNK  280 (337)
Q Consensus       277 ~v~~  280 (337)
                      .+.+
T Consensus       317 ~v~~  320 (384)
T 1eg5_A          317 YVST  320 (384)
T ss_dssp             ECBC
T ss_pred             EEec
Confidence            9876

>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*

Probab=99.51  E-value=6.2e-13  Score=128.38  Aligned_cols=243  Identities=14%  Similarity=0.121  Sum_probs=159.8

Q ss_pred             hhcccceee-eccCCCCCHHHHHHHhhhhh--hccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecC
Q psy10669         27 HRQINGIEL-IASENFTSLAVLECLGSCLQ--NKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPY  103 (337)
Q Consensus        27 ~rq~~~i~l-~asen~~~p~V~~a~~~~l~--~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~  103 (337)
                      ....+.+-| .++....+|.|.+++...+.  +.|  +++.+..+.-.....+....+++.+++++|.+.    .+|.++
T Consensus        18 ~~~~~~iyld~~~~~~~~~~v~~a~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~----~~v~~~   91 (423)
T 3lvm_A           18 RAMKLPIYLDYSATTPVDPRVAEKMMQFMTMDGTF--GNPASRSHRFGWQAEEAVDIARNQIADLVGADP----REIVFT   91 (423)
T ss_dssp             --CCSSEECBTTTCCCCCHHHHHHHTTSSSTTSCC--SCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCG----GGEEEE
T ss_pred             cccCCCEeecCCCcCCCCHHHHHHHHHHHhhcccc--cCCCccccchhHHHHHHHHHHHHHHHHHcCCCC----CeEEEe
Confidence            334444443 34555679999999988766  444  555552222222334444556689999999975    256666


Q ss_pred             CC-chhHHHHHHhhC-----Cc-------------------------------------------c--cc-cccEEEEcC
Q psy10669        104 SG-SPANFAVCEKAL-----PT-------------------------------------------N--NA-RFDFLSSGT  131 (337)
Q Consensus       104 Sg-t~AN~~v~~aLl-----~~-------------------------------------------~--~a-~pklII~~~  131 (337)
                      +| +.|+..++.+++     +.                                           +  +. ++++|++..
T Consensus        92 ~ggt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~  171 (423)
T 3lvm_A           92 SGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRDDTILVSIMH  171 (423)
T ss_dssp             SSHHHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHCCTTEEEEECCS
T ss_pred             CChHHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHHHHcCCEEEEeccCCCCccCHHHHHHhcCCCcEEEEEeC
Confidence            66 889888888776     21                                           0  01 267777763


Q ss_pred             cc--cccccChHHHHHHhhhcCCeEEEeccccccccc---------eeeeeccC-----C-chhhh--hHHHHHhhccC-
Q psy10669        132 TC--YSRCLDYARFRQICDETDSIMFADMSHISGLIA---------GVKGVTKT-----G-EKILY--DYEEKINNAVF-  191 (337)
Q Consensus       132 S~--~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T~~~-----G-g~i~~--~l~~~i~~~~~-  191 (337)
                      ..  .+...|+++|.++|+++|++|++|++|+.|...         .++++.+|     | |+++.  ++.+.+.+... 
T Consensus       172 ~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~sK~~g~~g~G~~~~~~~~~~~~~~~~~~  251 (423)
T 3lvm_A          172 VNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKLPIDLSQLKVDLMSFSGHKIYGPKGIGALYVRRKPRVRIEAQMHG  251 (423)
T ss_dssp             BCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCTTTSCCSEEEEESTTTTSCSSCEEEEECBTTBCCCCCSSCS
T ss_pred             CCCCCccccCHHHHHHHHHHcCCEEEEEhhhhcCCCCcChhhcCCCEEEechHHhcCCCCeEEEEEeccccCCCCccccC
Confidence            22  468889999999999999999999999998764         13333322     2 44433  23333333222 


Q ss_pred             -----CCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCC--CCeEEEEEecCCCcc
Q psy10669        192 -----PSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGT--DVHLILIDLRKNKLT  263 (337)
Q Consensus       192 -----p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t--~~h~v~V~~~~~~~~  263 (337)
                           ....++++.+.++++..++..+. ...++.++++.++.++|.+.|.+. |+++.....  ..+++.+.+  .+.+
T Consensus       252 ~~~~~~~~~~~~~~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~--~~~~  328 (423)
T 3lvm_A          252 GGHERGMRSGTLPVHQIVGMGEAYRIAK-EEMATEMERLRGLRNRLWNGIKDIEEVYLNGDLEHGAPNILNVSF--NYVE  328 (423)
T ss_dssp             SCTTTTTCCSCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTTSTTEEEESCSTTBCTTEEEEEE--TTSC
T ss_pred             CcccccccCCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEe--CCCC
Confidence                 12357888999999988887764 346888999999999999999886 898876221  134555655  4557


Q ss_pred             hHHHHHHHhhcCceecc
Q psy10669        264 GSKVELVLEEIAIACNK  280 (337)
Q Consensus       264 ~~~~~~~L~~~gI~v~~  280 (337)
                      ..++.+.|.+  |.+..
T Consensus       329 ~~~l~~~l~~--i~v~~  343 (423)
T 3lvm_A          329 GESLIMALKD--LAVSS  343 (423)
T ss_dssp             HHHHHHHTTT--EECBC
T ss_pred             HHHHHHHHhh--heecc
Confidence            7888888887  66554

>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3

Probab=99.51  E-value=3.3e-12  Score=122.04  Aligned_cols=241  Identities=11%  Similarity=0.051  Sum_probs=163.4

Q ss_pred             cceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhH
Q psy10669         31 NGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPAN  109 (337)
Q Consensus        31 ~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN  109 (337)
                      +...+.++-..++|.|.+++...+.+.          |+ . ...++...+++.+++++|.+. ++  ++.+++| +.|+
T Consensus        34 ~~~l~~~~~~~~~~~v~~a~~~~~~~~----------~~-~-~~~~~~~~~~~~la~~~g~~~-~~--~v~~t~g~t~al   98 (393)
T 1vjo_A           34 SRLLLGPGPSNAHPSVLQAMNVSPVGH----------LD-P-AFLALMDEIQSLLRYVWQTEN-PL--TIAVSGTGTAAM   98 (393)
T ss_dssp             CCEECSSSCCCCCHHHHHHHSSCCCCT----------TS-H-HHHHHHHHHHHHHHHHHTCCC-SC--EEEESSCHHHHH
T ss_pred             cceeccCCCCCCCHHHHHHHhcccccc----------cC-H-HHHHHHHHHHHHHHHHhCCCC-Cc--EEEEeCchHHHH
Confidence            346667777778999999997654321          11 1 133444455678899999964 11  4666655 7899


Q ss_pred             HHHHHhhCCc-------------------------------------------cc---c-cccEEEEcCcc--cccccCh
Q psy10669        110 FAVCEKALPT-------------------------------------------NN---A-RFDFLSSGTTC--YSRCLDY  140 (337)
Q Consensus       110 ~~v~~aLl~~-------------------------------------------~~---a-~pklII~~~S~--~~~~~d~  140 (337)
                      ..++.+++++                                           +.   . ++++|++..-.  .+...|+
T Consensus        99 ~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~l  178 (393)
T 1vjo_A           99 EATIANAVEPGDVVLIGVAGYFGNRLVDMAGRYGADVRTISKPWGEVFSLEELRTALETHRPAILALVHAETSTGARQPL  178 (393)
T ss_dssp             HHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCC
T ss_pred             HHHHHhccCCCCEEEEEcCChhHHHHHHHHHHcCCceEEEecCCCCCCCHHHHHHHHhhCCceEEEEeccCCCcceeccH
Confidence            8888888654                                           00   1 36777776322  4677899


Q ss_pred             HHHHHHhhhcCCeEEEeccccccccc---------eeeeeccC------C-chhhh--hHHHHHhhc---cCC-------
Q psy10669        141 ARFRQICDETDSIMFADMSHISGLIA---------GVKGVTKT------G-EKILY--DYEEKINNA---VFP-------  192 (337)
Q Consensus       141 ~~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T~~~------G-g~i~~--~l~~~i~~~---~~p-------  192 (337)
                      ++|.++|+++|+++++|++|..|...         .++++.+|      | |+++.  ++.+.+...   +.+       
T Consensus       179 ~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~di~~~s~sK~l~~~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (393)
T 1vjo_A          179 EGVGELCREFGTLLLVDTVTSLGGVPIFLDAWGVDLAYSCSQKGLGCSPGASPFTMSSRAIEKLQRRRTKVANWYLDMNL  258 (393)
T ss_dssp             TTHHHHHHHHTCEEEEECTTTTTTSCCCTTTTTCSEEECCSSSTTCSCSSCEEEEECHHHHHHHHTCSSCCSCSTTCHHH
T ss_pred             HHHHHHHHHcCCEEEEECCccccCcCCcccccCccEEEEcCcccccCCCceEEEEECHHHHHHHhccCCCCCceecCcHh
Confidence            99999999999999999999977554         12333322      2 55554  465555321   111       


Q ss_pred             --------CC-CCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCC--CCeEEEEEecCCC
Q psy10669        193 --------SL-QGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGT--DVHLILIDLRKNK  261 (337)
Q Consensus       193 --------~~-~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t--~~h~v~V~~~~~~  261 (337)
                              .. .|+++++.++++..++..+.+...++.++++.++.++|.+.|.+.|+++.....  ..+++.+.+.. +
T Consensus       259 ~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~-~  337 (393)
T 1vjo_A          259 LGKYWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDIGLSLHVEKEYRLPTLTTVCIPD-G  337 (393)
T ss_dssp             HHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCSSEEEEECCT-T
T ss_pred             hhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcCCcccCCccccCCcEEEEEcCC-C
Confidence                    11 238889999999988887644345788999999999999999998988865211  24566776632 4


Q ss_pred             cchHHHHHHHhhc-CceeccCc------ccchh
Q psy10669        262 LTGSKVELVLEEI-AIACNKNT------GISLA  287 (337)
Q Consensus       262 ~~~~~~~~~L~~~-gI~v~~~~------girig  287 (337)
                      .+..++.+.|.+. ||.+.+..      .+||+
T Consensus       338 ~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis  370 (393)
T 1vjo_A          338 VDGKAVARRLLNEHNIEVGGGLGELAGKVWRVG  370 (393)
T ss_dssp             CCHHHHHHHHHHHHCEECEECCGGGTTTEEEEE
T ss_pred             CCHHHHHHHHHhhCCEEEecCccccCCCEEEEe
Confidence            5677888888775 99987532      67887

>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*

Probab=99.51  E-value=3.6e-12  Score=121.12  Aligned_cols=243  Identities=9%  Similarity=0.030  Sum_probs=164.8

Q ss_pred             ccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeec-CCCchh
Q psy10669         30 INGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQP-YSGSPA  108 (337)
Q Consensus        30 ~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~-~Sgt~A  108 (337)
                      ...+.+.+.-..++|.|.+++...+.+        .+ +   ....++....++.+++++|.+.+   ..|.+ .||+.|
T Consensus        22 ~~~~~~~p~p~~~~~~v~~a~~~~~~~--------~~-~---~~~~~~~~~l~~~la~~~~~~~~---~~v~~~~gg~~a   86 (393)
T 3kgw_A           22 PTRLLLGPGPSNLAPRVLAAGSLRMIG--------HM-Q---KEMLQIMEEIKQGIQYVFQTRNP---LTLVVSGSGHCA   86 (393)
T ss_dssp             CCCEECSSSCCCCCHHHHHHTTCCCCC--------TT-S---HHHHHHHHHHHHHHHHHHTCCCS---EEEEESCCTTTH
T ss_pred             ccceeccCCCCCCCHHHHHHhcccccC--------cc-c---HHHHHHHHHHHHHHHHHhCCCCC---cEEEEeCCcHHH
Confidence            456778888888899999999753211        11 1   12234444556789999998764   23555 556899


Q ss_pred             HHHHHHhhCCc-------------------------------------------cc---c-cccEEEEcCcc--cccccC
Q psy10669        109 NFAVCEKALPT-------------------------------------------NN---A-RFDFLSSGTTC--YSRCLD  139 (337)
Q Consensus       109 N~~v~~aLl~~-------------------------------------------~~---a-~pklII~~~S~--~~~~~d  139 (337)
                      +..++.+++++                                           +.   . ++++|++....  .+...|
T Consensus        87 l~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~  166 (393)
T 3kgw_A           87 METALFNLLEPGDSFLTGTNGIWGMRAAEIADRIGARVHQMIKKPGEHYTLQEVEEGLAQHKPVLLFLVHGESSTGVVQP  166 (393)
T ss_dssp             HHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC
T ss_pred             HHHHHHhcCCCCCEEEEEeCCchhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhCCCcEEEEeccCCcchhhcc
Confidence            98888888754                                           00   1 36877776333  468888


Q ss_pred             hHHHHHHhhhcCCeEEEeccccccccc---------eeeee-cc-----CC-chhhh--hHHHHHhhccCC---------
Q psy10669        140 YARFRQICDETDSIMFADMSHISGLIA---------GVKGV-TK-----TG-EKILY--DYEEKINNAVFP---------  192 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T-~~-----~G-g~i~~--~l~~~i~~~~~p---------  192 (337)
                      +++|.++|+++|+++++|++|+.|...         .++++ +|     .| |+++.  ++.+.+.....+         
T Consensus       167 l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~d~~~~s~sK~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (393)
T 3kgw_A          167 LDGFGELCHRYQCLLLVDSVASLGGVPIYMDQQGIDIMYSSSQKVLNAPPGISLISFNDKAKYKVYSRKTKPVSFYTDIT  246 (393)
T ss_dssp             CTTHHHHHHHTTCEEEEECTTTTTTSCCCTTTTTCCEEEEESSSTTCCCSSCEEEEECHHHHHHHHTCSSCCSCSTTCHH
T ss_pred             HHHHHHHHHHcCCEEEEECCccccCcccchhhcCCCEEEecCcccccCCCceeEEEECHHHHHHHhccCCCCCceeecHH
Confidence            999999999999999999999977544         12233 23     12 44443  465655432111         


Q ss_pred             -------------CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCC--C-CCeEEEEE
Q psy10669        193 -------------SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGG--T-DVHLILID  256 (337)
Q Consensus       193 -------------~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~--t-~~h~v~V~  256 (337)
                                   ...++++.+.++++..++..+.+...++..+++.++.++|.+.|.+.|+++....  . -..++.+.
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~  326 (393)
T 3kgw_A          247 YLAKLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWRRHREATAHLHKHLQEMGLKFFVKDPEIRLPTITTVT  326 (393)
T ss_dssp             HHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSSSGGGBCSSEEEEE
T ss_pred             HHHHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCChhhcCCeEEEEe
Confidence                         1246788999999988888775444688999999999999999999999886311  1 13445565


Q ss_pred             ecCCCcchHHHHHHHhhc-CceeccCc------ccchhh
Q psy10669        257 LRKNKLTGSKVELVLEEI-AIACNKNT------GISLAA  288 (337)
Q Consensus       257 ~~~~~~~~~~~~~~L~~~-gI~v~~~~------girig~  288 (337)
                      +.. +.+..++.+.|.+. ||.+....      .+||+.
T Consensus       327 ~~~-~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~  364 (393)
T 3kgw_A          327 VPA-GYNWRDIVSYVLDHFSIEISGGLGPTEERVLRIGL  364 (393)
T ss_dssp             CCT-TBCHHHHHHHHHHHHCEECBCCCGGGTTTEEEEEC
T ss_pred             CCC-CCCHHHHHHHHHHhCCEEEeCCcccCCCCEEEEEe
Confidence            533 45777888887764 99998632      578774

>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*

Probab=99.49  E-value=4.5e-13  Score=140.00  Aligned_cols=202  Identities=12%  Similarity=0.076  Sum_probs=143.3

Q ss_pred             HHHHHHHhhcCCCCCCCcceeecCCCc-hhHHHHHHhhCCc---------------------------------------
Q psy10669         80 VAQQRSLKAFNLDPEQWGCNVQPYSGS-PANFAVCEKALPT---------------------------------------  119 (337)
Q Consensus        80 ~~~~~~a~lfg~~~~~~~~~v~~~Sgt-~AN~~v~~aLl~~---------------------------------------  119 (337)
                      .++++++++||++.     .+.+++|+ .||.+++.+++++                                       
T Consensus       177 e~e~~lA~~~gae~-----~i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~~~~~l~Ga~~v~v~~~~~~~~i~  251 (730)
T 1c4k_A          177 AAEKHAARVYNADK-----TYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNSALAMAGGRPVYLQTNRNPYGFI  251 (730)
T ss_dssp             HHHHHHHHHTTCSE-----EEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHTTTTCCEEEEECEEECTTCCE
T ss_pred             HHHHHHHHHHCCCc-----EEEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHCCCEEEEEeCCccccCcc
Confidence            44578999999985     57788885 8999999999764                                       


Q ss_pred             ------cc-----c-----c------c----cEEEEcCcc-cccccChHHHHHHhhhcCCeEEEecccccccc-------
Q psy10669        120 ------NN-----A-----R------F----DFLSSGTTC-YSRCLDYARFRQICDETDSIMFADMSHISGLI-------  165 (337)
Q Consensus       120 ------~~-----a-----~------p----klII~~~S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli-------  165 (337)
                            .+     .     +      +    |+|+++.++ ++...|+++|.++|+++|++|++|+||..++.       
T Consensus       252 g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~pn~~G~v~dl~~I~~la~~~g~~livDeAh~~~~~f~~~~~g  331 (730)
T 1c4k_A          252 GGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLGTYDGTIYNAHEVVKRIGHLCDYIEFDSAWVGYEQFIPMMRN  331 (730)
T ss_dssp             EEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESBCTTSEEECHHHHHHHHGGGBSEEEEECTTCCGGGSSGGGGG
T ss_pred             CCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECCCCCCeecCHHHHHHHHHHcCCeEEEEcccccccccCcccCC
Confidence                  11     1     1      1    667666444 57889999999999999999999999975321       


Q ss_pred             ---------c------eeeeec-c------CCchhhh--h-H--------HHHHhhccCCCCCCCCcHHHHHHHHHHHHH
Q psy10669        166 ---------A------GVKGVT-K------TGEKILY--D-Y--------EEKINNAVFPSLQGGPHNHAIGAIATAMLQ  212 (337)
Q Consensus       166 ---------~------g~~~T~-~------~Gg~i~~--~-l--------~~~i~~~~~p~~~g~~~~~~iaala~a~~e  212 (337)
                               +      .+++|. |      .||++..  + +        ..+++........++|+++.++|+.+|+..
T Consensus       332 ~~~l~~~~~g~D~~~~iv~~S~hK~L~g~~~gg~I~v~~~~l~g~~~~i~~~~~~~~~~~~~stsp~~~~iaal~aA~~~  411 (730)
T 1c4k_A          332 SSPLLIDDLGPEDPGIIVVQSVHKQQAGFSQTSQIHKKDSHIKGQLRYCDHKHFNNSFNLFMSTSPFYPMYAALDVNAAM  411 (730)
T ss_dssp             GCTTSCCCCCTTSCEEEEEECHHHHSSCCTTCEEEEEECGGGTTSTTCCCHHHHHHHHHHHSCSSCCHHHHHHHHHHHHH
T ss_pred             cCcccccccCCCCCCEEEEECCCCCCCCCCCEEEEEecchhhcCcccccCHHHHHHHHHHhCCCCCcHHHHHHHHHHHHH
Confidence                     1      122332 2      2456621  1 1        234444322233678999999999999988


Q ss_pred             HhchhhHHHHHHHHHHHHHHHHHHHh--CCCEEecCCC------------------------------------CC----
Q psy10669        213 AQSDEFKSYQAQVKANASHLSDEMIK--RGYHVVTGGT------------------------------------DV----  250 (337)
Q Consensus       213 ~~~~~~~~y~~~v~~na~~l~~~L~~--~G~~v~~~~t------------------------------------~~----  250 (337)
                      +..+.+.++.++++++++++++.|.+  .|+++....+                                    ++    
T Consensus       412 l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i  491 (730)
T 1c4k_A          412 QEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDGDTEDMANNIDYWRFEKGAKWHAYEGYGDNQYYV  491 (730)
T ss_dssp             HSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEETTEEGGGSCHHHHTTCGGGGBCCTTCTTTCCTTCCTTCEEE
T ss_pred             HHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEccccccccccccccccccccccchhhccCccchhccccccCCccccc
Confidence            75436788999999999999999998  7999864211                                    22    


Q ss_pred             --eEEEEEe----------cCCCcchHHHHHHHhhcCceeccCc--ccch
Q psy10669        251 --HLILIDL----------RKNKLTGSKVELVLEEIAIACNKNT--GISL  286 (337)
Q Consensus       251 --h~v~V~~----------~~~~~~~~~~~~~L~~~gI~v~~~~--giri  286 (337)
                        ..+.+.+          ...++++.++.+.|.+.||.+++..  .+|+
T Consensus       492 dp~kv~i~~pg~~~~~g~~~~~g~~~~~l~~~L~e~GI~v~~~~~~~ir~  541 (730)
T 1c4k_A          492 DPNKFMLTTPGINPETGDYEDFGVPATIVANYLRDHGIIPEKSDLNSILF  541 (730)
T ss_dssp             CTTEEEEECSSEETTTTEECSSCCCHHHHHHHHHHTTCCCSEECSSEEEE
T ss_pred             CCeEEEEEeCCcccccccccccCCCHHHHHHHHHHCCcEEEECCCCeEEE
Confidence              1255665          3346789999999998899998754  5555

>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*

Probab=99.49  E-value=1.2e-13  Score=143.66  Aligned_cols=198  Identities=20%  Similarity=0.155  Sum_probs=143.0

Q ss_pred             HHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHhhCCc----------------------------c--------
Q psy10669         78 EIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEKALPT----------------------------N--------  120 (337)
Q Consensus        78 E~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~aLl~~----------------------------~--------  120 (337)
                      -..++++++++||+++     .+.+++| +.||.+++.+++++                            .        
T Consensus       197 i~eaE~~lA~~fGa~~-----a~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~~~l~lsGa~pv~v~~~~~~~gi  271 (715)
T 3n75_A          197 HKEAEQYIARVFNADR-----SYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGI  271 (715)
T ss_dssp             HHHHHHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHSCCEEEEECCCBCTTCC
T ss_pred             HHHHHHHHHHHhCCCC-----ceEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHHHHHHHcCCEEEEEecccccccc
Confidence            3456689999999986     5777888 58999999999875                            0        


Q ss_pred             ---c------c--------c-c--c----EEEEcCcccccccChHHHHHHhhhcCCeEEEecccccccc-c---------
Q psy10669        121 ---N------A--------R-F--D----FLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLI-A---------  166 (337)
Q Consensus       121 ---~------a--------~-p--k----lII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli-~---------  166 (337)
                         .      .        + |  |    +||+.++.++...|+++|.++|++++  ++||+||++|+. +         
T Consensus       272 ~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~pn~~G~v~dl~~I~ela~~~~--livDEAH~~~~~f~~~~~~~~al  349 (715)
T 3n75_A          272 LGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPIYEGKCGM  349 (715)
T ss_dssp             BCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESSCTTSEEECHHHHHHHCCCSE--EEEECTTCTTGGGSGGGTTSSTT
T ss_pred             ccCcccccCCHHHHHHHHhhCcCccCceEEEEECCCCCCccCCHHHHHHHhCcCc--EEEccccccccccCCcccccccc
Confidence               0      0        0 2  3    44445656689999999999998763  899999998762 1         


Q ss_pred             --e-----e---e-eecc------CCchhhh--h-HHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHH
Q psy10669        167 --G-----V---K-GVTK------TGEKILY--D-YEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVK  226 (337)
Q Consensus       167 --g-----~---~-~T~~------~Gg~i~~--~-l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~  226 (337)
                        +     +   + |+||      +||++..  + ..++++.+.....+++|+++.+||+.+|+..+...++++++++++
T Consensus       350 ~~g~~aD~vii~~~S~hKtL~gltqgs~i~v~~~i~~~~~~~~~~~~~STSpsy~~~AsldaA~~~~~~~~g~~~~~~l~  429 (715)
T 3n75_A          350 SGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVNEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNAGKRLINGSI  429 (715)
T ss_dssp             SSSCCTTCEEEEEECHHHHSSCCTTCEEEEEESCCCHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred             ccCcCCCEEEEEEecccccccCCCCeeEEEeCchhhHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhhccHHHHHHHH
Confidence              1     1   2 3333      3567654  2 244566654444478999999999999998885346788999999


Q ss_pred             HHHHHHHHHHHhC-----C--CEEecCC----------------------------CCCeEEEEEecCC---------Cc
Q psy10669        227 ANASHLSDEMIKR-----G--YHVVTGG----------------------------TDVHLILIDLRKN---------KL  262 (337)
Q Consensus       227 ~na~~l~~~L~~~-----G--~~v~~~~----------------------------t~~h~v~V~~~~~---------~~  262 (337)
                      +++++|++.|.+.     |  |++....                            .|.--+.|++...         |+
T Consensus       430 ~~a~~~r~~L~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~gf~~~~~~~~~~Dp~Kl~i~~~~~~~~G~~~~~Gi  509 (715)
T 3n75_A          430 ERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMEKDGTMSDFGI  509 (715)
T ss_dssp             HHHHHHHHHHHHHHHHSSSCCCEESSCSCCCSCSCEECCTTCCTTCCTTCCSSSEEECTTEEEEECSCBCTTSCBCSSCC
T ss_pred             HHHHHHHHHHHHhhhhcccceeeccCcccccchhhhccCcccccccccccccCcccCCCeEEEEEcCCCCCCCccccCCC
Confidence            9999999999873     3  4554310                            2344566776543         67


Q ss_pred             chHHHHHHHhhcCceeccCc
Q psy10669        263 TGSKVELVLEEIAIACNKNT  282 (337)
Q Consensus       263 ~~~~~~~~L~~~gI~v~~~~  282 (337)
                      +|.++.++|+++||.+.+..
T Consensus       510 ~g~~~~~~L~~~~I~~E~~d  529 (715)
T 3n75_A          510 PASIVAKYLDEHGIVVEKTG  529 (715)
T ss_dssp             CHHHHHHHHHHTTCCCSEEE
T ss_pred             cHHHHHHHHHHCCCEEEecC
Confidence            88999999999999998755

>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}

Probab=99.49  E-value=1e-13  Score=136.52  Aligned_cols=246  Identities=13%  Similarity=0.081  Sum_probs=154.4

Q ss_pred             hhhhcHHHHHHHHHHHhhcccceeeeccCCCCCHHHHHHHhhhhhh-ccCCCCCCCcCcCccchHHHHHHHHHHHHHhhc
Q psy10669         11 LAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQN-KYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAF   89 (337)
Q Consensus        11 l~~~d~~~~~~~~~e~~rq~~~i~l~asen~~~p~V~~a~~~~l~~-~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lf   89 (337)
                      +.+..+++.+.+++|.+++...+..++.+|  .+.|++++...... ....+..|-+|  +....+++|    +.++++|
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n--~~~vl~A~~~~~~~~~~~~~~~g~~y--~~~~~~~l~----~~la~~~   78 (431)
T 3ht4_A            7 NGEKIAPIVKEVESQITEVHKRADEVIESN--QFRVLESFGKHKISDSHFIPTTGYGY--DDIGRDTLE----KVYADVF   78 (431)
T ss_dssp             TTTTSHHHHHHHHHHTHHHHHHHHHHHHHH--HHHHHHHHHHTTCCGGGSCCCCTTCC--SCHHHHHHH----HHHHHHT
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHhchhhhhcCCCCCCCC--ChhhHHHHH----HHHHHHh
Confidence            345566777777788889999999999999  67898888753211 11111222222  222234455    6889999


Q ss_pred             CCCCCCCcceeecCCCchhHHHHHHhhCCc-------------------c------------------------------
Q psy10669         90 NLDPEQWGCNVQPYSGSPANFAVCEKALPT-------------------N------------------------------  120 (337)
Q Consensus        90 g~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~-------------------~------------------------------  120 (337)
                      |.+...  +.++++||+.||..++.+++++                   .                              
T Consensus        79 g~~~~~--~~i~~~sGt~Ai~~al~al~~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~~~v~~~~~~~~d~e  156 (431)
T 3ht4_A           79 GAEAGL--VRPQIISGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYNAVPLTEGGLVDFE  156 (431)
T ss_dssp             TCSEEC--CBTTSCSHHHHHHHHHHTTCCTTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCEEEECCBCTTSSBCHH
T ss_pred             CCCccc--ccceeeCHHHHHHHHHHHhCCCCCEEEEeCCCCchhHHHHHhhcccccchHHHcCCEEEEeCCCCCCCcCHH
Confidence            998621  1234789999999999988643                   0                              


Q ss_pred             -c-----ccccEEEEcCc---ccccc---cChHHHHHHhhh--cCCeEEEeccccccccc---------eeeeec-c---
Q psy10669        121 -N-----ARFDFLSSGTT---CYSRC---LDYARFRQICDE--TDSIMFADMSHISGLIA---------GVKGVT-K---  173 (337)
Q Consensus       121 -~-----a~pklII~~~S---~~~~~---~d~~~l~eia~~--~ga~l~vD~AH~~Gli~---------g~~~T~-~---  173 (337)
                       +     .++++|++..|   ..++.   .|+++|.++|++  +|++|++|++|..+...         .+++|. |   
T Consensus       157 ~l~~~l~~~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~~~~~~g~Di~~~S~sK~lg  236 (431)
T 3ht4_A          157 AVAAAIHSNTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEPCHVGADLMAGSLIKNPG  236 (431)
T ss_dssp             HHHHHCCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSCCGGGTTCSEEEEETTSGGG
T ss_pred             HHHhhcCCCCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCCCccccCCeEEEcCccccCC
Confidence             0     02578887642   23344   455667788999  99999999999988753         133333 2   


Q ss_pred             -----CCchhhh--hHHHHHhhcc-CCCCC--CCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEE
Q psy10669        174 -----TGEKILY--DYEEKINNAV-FPSLQ--GGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHV  243 (337)
Q Consensus       174 -----~Gg~i~~--~l~~~i~~~~-~p~~~--g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v  243 (337)
                           .||+++.  ++.+.+.... .|++.  .++.+.....+..++.     ..+.+.++..+|++++++.|++.|+++
T Consensus       237 g~~~~~GG~v~~~~~li~~l~~~~~~~~~g~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~a~~l~~~L~~~g~~v  311 (431)
T 3ht4_A          237 GGIVKTGGYIVGKEQYVEACAYRLTSPGIGAEAGASLYSLQEMYQGFF-----LAPHVAGQALKGAIFTAAFLEKLGMNT  311 (431)
T ss_dssp             TTTCSSCEEEEECHHHHHHHHHHHSCTTTTTSCSCCCSCSHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHTCCE
T ss_pred             CCCCCceEEEEecHHHHHHHHHHhccCCcccccCccHHHHHHHHhHhh-----hHHHHHHHHHHHHHHHHHHHHhCcCEe
Confidence                 3677765  5666655422 22321  1221111122222222     235778899999999999999999998


Q ss_pred             ecCCCCCe-----EEEEEecCCCcchHHHHHHHhhc
Q psy10669        244 VTGGTDVH-----LILIDLRKNKLTGSKVELVLEEI  274 (337)
Q Consensus       244 ~~~~t~~h-----~v~V~~~~~~~~~~~~~~~L~~~  274 (337)
                      ..  ..+|     ++.|.+++.. ....+.+.|.+.
T Consensus       312 ~p--~~~~~~~~li~~i~l~~~~-~~~~~~~~l~~~  344 (431)
T 3ht4_A          312 SP--AWNAPRTDLIQSVQFDDKD-RMIAFCQAIQYA  344 (431)
T ss_dssp             ES--CTTSCCSSSCCEEECCCHH-HHHHHHHHHHHT
T ss_pred             cC--CCCCCCccEEEEEEeCCHH-HHHHHHHHHHhc
Confidence            64  3555     8888886422 445566666653

>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*

Probab=99.49  E-value=8.5e-13  Score=125.55  Aligned_cols=239  Identities=13%  Similarity=0.070  Sum_probs=160.4

Q ss_pred             CCCHHHHHHHhhhhhhccCCCCCC-CcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHhh-C
Q psy10669         41 FTSLAVLECLGSCLQNKYSEGLPG-KRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEKA-L  117 (337)
Q Consensus        41 ~~~p~V~~a~~~~l~~~y~~g~~g-~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~aL-l  117 (337)
                      ..++.|++++...+.... ...+. .+.|..   .......+++.+++++|.+.    .++.+++| +.|+..++.++ +
T Consensus        27 ~~~~~v~~a~~~~~~~~~-~~~~~~~~~y~~---~~~~~~~l~~~la~~~g~~~----~~v~~~~g~t~a~~~~~~~~~~   98 (390)
T 1elu_A           27 ILPTVALEAITAMYGYLQ-ENGPFSIAANQH---IQQLIAQLRQALAETFNVDP----NTITITDNVTTGCDIVLWGLDW   98 (390)
T ss_dssp             CCCHHHHHHHHHHHHHHH-HHCSSSHHHHHH---HHHHHHHHHHHHHHHTTSCG----GGEEEESSHHHHHHHHHHHSCC
T ss_pred             CCCHHHHHHHHHHHHHHh-ccCCcchhhHHH---HHHHHHHHHHHHHHHcCCCH----HHEEEeCChHHHHHHHHhCCCC
Confidence            347889999987655421 11111 112221   11333345578999999875    24666554 88998888888 5


Q ss_pred             Cc----------------------------------c-----------c--c---cccEEEEcCcc--cccccChHHHHH
Q psy10669        118 PT----------------------------------N-----------N--A---RFDFLSSGTTC--YSRCLDYARFRQ  145 (337)
Q Consensus       118 ~~----------------------------------~-----------~--a---~pklII~~~S~--~~~~~d~~~l~e  145 (337)
                      ++                                  .           +  +   ++++|++..-.  .+...|+++|.+
T Consensus        99 ~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~  178 (390)
T 1elu_A           99 HQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGPKTRLVILSHLLWNTGQVLPLAEIMA  178 (390)
T ss_dssp             CTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCTTEEEEEEESBCTTTCCBCCHHHHHH
T ss_pred             CCCCEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcCCCceEEEEeccccCCceecCHHHHHH
Confidence            53                                  0           0  0   15777776333  368889999999


Q ss_pred             Hhh----hcCCeEEEeccccccccc---------eeeeeccC------C-chhhh--hHHHHHhhccC------------
Q psy10669        146 ICD----ETDSIMFADMSHISGLIA---------GVKGVTKT------G-EKILY--DYEEKINNAVF------------  191 (337)
Q Consensus       146 ia~----~~ga~l~vD~AH~~Gli~---------g~~~T~~~------G-g~i~~--~l~~~i~~~~~------------  191 (337)
                      +|+    ++|+++++|++|+.|...         .++++.+|      | |+++.  ++.+.+.+...            
T Consensus       179 l~~~~~~~~~~~li~Dea~~~g~~~~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  258 (390)
T 1elu_A          179 VCRRHQGNYPVRVLVDGAQSAGSLPLDFSRLEVDYYAFTGHKWFAGPAGVGGLYIHGDCLGEINPTYVGWRSITYGAKGE  258 (390)
T ss_dssp             HHHHCCSSSCCEEEEECTTTBTTBCCCTTTSCCSEEEEESSSTTCCCTTCEEEEECTTTGGGCCCCSCCTTTEEECTTSC
T ss_pred             HHhhhhhhcCcEEEEEcccccCCcCCChhhcCCCEEEccccccccCCCceEEEEECHHhHhhcCCccccCCcccccccCc
Confidence            999    999999999999987654         13344433      4 55544  35444443211            


Q ss_pred             ---------CCCCCCCcHHHHHHHHHHHHHHhchh-hHHHHHHHHHHHHHHHHHHHhC-CCEEecC-CCCCeEEEEEecC
Q psy10669        192 ---------PSLQGGPHNHAIGAIATAMLQAQSDE-FKSYQAQVKANASHLSDEMIKR-GYHVVTG-GTDVHLILIDLRK  259 (337)
Q Consensus       192 ---------p~~~g~~~~~~iaala~a~~e~~~~~-~~~y~~~v~~na~~l~~~L~~~-G~~v~~~-~t~~h~v~V~~~~  259 (337)
                               ....++++++.++++..++..+...+ .++.++++.++.++|.+.|.+. |+++... .+...++.+.+..
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~  338 (390)
T 1elu_A          259 PTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQLPHVHCLATSAPQAGLVSFTVDS  338 (390)
T ss_dssp             EEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSTTEEESCSSCCSSSEEEEEECS
T ss_pred             ccccccchHhhCCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhcCCcEEecCccccccEEEEEcCC
Confidence                     11246788888888888887765434 6788999999999999999996 9988742 3566777787753


Q ss_pred             CCcchHHHHHHHhhcCceeccCc---ccchhh
Q psy10669        260 NKLTGSKVELVLEEIAIACNKNT---GISLAA  288 (337)
Q Consensus       260 ~~~~~~~~~~~L~~~gI~v~~~~---girig~  288 (337)
                       +.+..++.+.|.+.||.+.+..   .|||+.
T Consensus       339 -~~~~~~~~~~l~~~gi~v~~~~~~~~iRis~  369 (390)
T 1elu_A          339 -PLGHRAIVQKLEEQRIYLRTIADPDCIRACC  369 (390)
T ss_dssp             -SSCHHHHHHHHHHTTEECEEETTTTEEEEEC
T ss_pred             -CCCHHHHHHHHHHCCEEEEecCCCCeEEEec
Confidence             4577888888988899987642   688875

>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}

Probab=99.48  E-value=4.2e-12  Score=121.88  Aligned_cols=235  Identities=8%  Similarity=0.007  Sum_probs=156.2

Q ss_pred             ccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHh
Q psy10669         37 ASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEK  115 (337)
Q Consensus        37 asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~a  115 (337)
                      ++....+|.|++++...+.+.  .+++++++..|. ........+++.+++++|.+.    .+|.+++| +.++..++.+
T Consensus        33 ~~~~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~l~~~la~~~g~~~----~~v~~~~g~t~al~~~~~~  105 (406)
T 3cai_A           33 PAGMLIPDSVATTVSTAFRRS--GASTVGAHPSAR-RSAAVLDAAREAVADLVNADP----GGVVLGADRAVLLSLLAEA  105 (406)
T ss_dssp             GGCCCCCHHHHHHHHHHHHHC--CSSSCSSSHHHH-HHHHHHHHHHHHHHHHHTCCG----GGEEEESCHHHHHHHHHHH
T ss_pred             CCcCCCCHHHHHHHHHHHHhc--CCCCCCccHHHH-HHHHHHHHHHHHHHHHhCCCC----CeEEEeCChHHHHHHHHHH
Confidence            334467999999998775542  234443332221 123334445678999999874    25777777 6677666666


Q ss_pred             h---CCc----------------------------------c----------c--c---cccEEEEcCcc--cccccChH
Q psy10669        116 A---LPT----------------------------------N----------N--A---RFDFLSSGTTC--YSRCLDYA  141 (337)
Q Consensus       116 L---l~~----------------------------------~----------~--a---~pklII~~~S~--~~~~~d~~  141 (337)
                      +   +++                                  .          +  +   ++++|++..-.  .+...|++
T Consensus       106 l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~l~  185 (406)
T 3cai_A          106 SSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDIETGELPTWQWESLISKSTRLVAVNSASGTLGGVTDLR  185 (406)
T ss_dssp             TGGGGBTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCCTTTCCCCGGGHHHHCCTTEEEEEEESBCTTTCBBCCCH
T ss_pred             HhhccCCCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecCcccCCcCHHHHHHHhCCCceEEEEeCCcCCccccCCHH
Confidence            6   332                                  0          0  0   15777776322  36888999


Q ss_pred             HHHHHhhhcCCeEEEeccccccccc---------eeeeec-c----CCc-hhhh--hHHHHHhhccC--C------CCCC
Q psy10669        142 RFRQICDETDSIMFADMSHISGLIA---------GVKGVT-K----TGE-KILY--DYEEKINNAVF--P------SLQG  196 (337)
Q Consensus       142 ~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T~-~----~Gg-~i~~--~l~~~i~~~~~--p------~~~g  196 (337)
                      +|.++|+++|+++++|++|..|...         .++++. |    .+| +++.  ++.+.+.+...  .      ...+
T Consensus       186 ~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~~K~~g~~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  265 (406)
T 3cai_A          186 AMTKLVHDVGALVVVDHSAAAPYRLLDIRETDADVVTVNAHAWGGPPIGAMVFRDPSVMNSFGSVSTNPYATGPARLEIG  265 (406)
T ss_dssp             HHHHHHHHTTCEEEEECTTTTTTCCCCHHHHCCSEEEEEGGGGTSCSCEEEEESCHHHHHTSCCCCSCTTCCGGGGGCCS
T ss_pred             HHHHHHHHcCCEEEEEcccccCCCCCCchhcCCCEEEeehhhhcCCCcCeEEEEehHHHhhcCCcccCCCCCccccccCC
Confidence            9999999999999999999988764         123332 2    245 7665  45555543311  0      1257


Q ss_pred             CCcHHHHHHHHHHHHHHhch--------------hhHHHHHHHHHHHHHHHHHHHhC-CCEEecCC-CCCeEEEEEecCC
Q psy10669        197 GPHNHAIGAIATAMLQAQSD--------------EFKSYQAQVKANASHLSDEMIKR-GYHVVTGG-TDVHLILIDLRKN  260 (337)
Q Consensus       197 ~~~~~~iaala~a~~e~~~~--------------~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~-t~~h~v~V~~~~~  260 (337)
                      +++++.++++..++..+.+.              .+++.++++.++.++|.+.|.+. |+++.... ....++.+.+.  
T Consensus       266 t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~--  343 (406)
T 3cai_A          266 VHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMVSLRSLPLVMLIGRPEAQIPVVSFAVH--  343 (406)
T ss_dssp             CCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEEECCCCSSBCSEEEEEET--
T ss_pred             CccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCccccCCEEEEEEC--
Confidence            88999998888888776431              25778889999999999999984 88876521 22445556554  


Q ss_pred             CcchHHHHHHHhhcCceecc
Q psy10669        261 KLTGSKVELVLEEIAIACNK  280 (337)
Q Consensus       261 ~~~~~~~~~~L~~~gI~v~~  280 (337)
                      +.+..++.+.|.+.||.+..
T Consensus       344 ~~~~~~~~~~L~~~gi~v~~  363 (406)
T 3cai_A          344 KVPADRVVQRLADNGILAIA  363 (406)
T ss_dssp             TBCHHHHHHHHHHTTEECEE
T ss_pred             CcCHHHHHHHHHHCCcEEec
Confidence            45678888899889999875

>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*

Probab=99.48  E-value=4.1e-13  Score=130.53  Aligned_cols=245  Identities=13%  Similarity=0.036  Sum_probs=148.9

Q ss_pred             ceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCC---cCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeec-C-CCc
Q psy10669         32 GIELIASENFTSLAVLECLGSCLQNKYSEGLPGK---RYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQP-Y-SGS  106 (337)
Q Consensus        32 ~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~---r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~-~-Sgt  106 (337)
                      ...+.|.--.++|.|++++...+.+.+  |++.+   -.+.+. ...++-+.+|++++++||++++   ..|.| + +||
T Consensus        28 ~yl~~agpt~~p~~V~~a~~~~~~~~~--~n~~s~~~~~h~~~-~~~~~~~~ar~~la~ll~~~~~---~evif~t~~~T  101 (386)
T 3qm2_A           28 VFNFSSGPAMLPAEVLKLAQQELCDWH--GLGTSVMEISHRGK-EFIQVAEEAEQDFRDLLNIPSN---YKVLFCHGGGR  101 (386)
T ss_dssp             CEECCSSSCCCCHHHHHHHTCC--------------------------CCHHHHHHHHHHHTCCTT---EEEEEEESCTT
T ss_pred             CccccCCCCCCCHHHHHHHHHHHHhcc--ccCccccccCCCCH-HHHHHHHHHHHHHHHHhCCCCC---ceEEEEcCCch
Confidence            456778888889999999988766543  33333   122232 3344555788999999999642   25777 3 558


Q ss_pred             hhHHHHHHhhCCc-------------------------------c-------c-------c---cccEEEEcCccc--cc
Q psy10669        107 PANFAVCEKALPT-------------------------------N-------N-------A---RFDFLSSGTTCY--SR  136 (337)
Q Consensus       107 ~AN~~v~~aLl~~-------------------------------~-------~-------a---~pklII~~~S~~--~~  136 (337)
                      .+|..++.+++++                               .       .       +   ++++|.+.+...  +.
T Consensus       102 ~a~n~ai~~l~~~gd~v~~~~~~~~~~~~~~~a~~~G~v~~v~~~~~~~G~~~~~~~~~~~l~~~t~lV~~~h~et~tG~  181 (386)
T 3qm2_A          102 GQFAGVPLNLLGDKTTADYVDAGYWAASAIKEAKKYCAPQIIDAKITVDGKRAVKPMREWQLSDNAAYLHYCPNETIDGI  181 (386)
T ss_dssp             HHHHHHHHHHCTTCCEEEEEESSHHHHHHHHHHTTTSEEEEEECEEEETTEEEECCGGGCCCCTTCSCEEECSEETTTTE
T ss_pred             HHHHHHHHhccCCCCeEEEEeCCHHHHHHHHHHHHhCCeEEEecCcccCCCCCCchHHHhhcCCCCcEEEEECCcCCcCE
Confidence            8877777888653                               1       0       0   156777765444  66


Q ss_pred             c-cChHHHHHHhhhcCCeEEEeccccccccc------e-eeeec-----cCC-chhh-h-hHHHHHhh-----------c
Q psy10669        137 C-LDYARFRQICDETDSIMFADMSHISGLIA------G-VKGVT-----KTG-EKIL-Y-DYEEKINN-----------A  189 (337)
Q Consensus       137 ~-~d~~~l~eia~~~ga~l~vD~AH~~Gli~------g-~~~T~-----~~G-g~i~-~-~l~~~i~~-----------~  189 (337)
                      . .|+++|   +  +|++++||++|++|.+.      + +.++.     |+| |++. . ++.+++.+           .
T Consensus       182 ~i~pi~~i---~--~g~~~~vDa~qs~g~~pidv~~~~~~~~s~hK~lGP~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~  256 (386)
T 3qm2_A          182 AIDETPDF---G--PEVVVTADFSSTILSAPLDVSRYGVIYAGAQKNIGPAGLTLVIVREDLLGKAHESCPSILDYTVLN  256 (386)
T ss_dssp             ECCCCCCC---C--TTCCEEEECTTTTTSSCCCGGGCSEEEEETTTTTCCTTEEEEEEEGGGCSCCCTTSCGGGCHHHHH
T ss_pred             ecCchhhh---c--CCCEEEEEcccccCCCCCCccccCEEEEecccccCCCccEEEEECHHHHhhhcccCCcHHHHHHHh
Confidence            4 566655   4  69999999999999987      2 23333     345 4443 2 22111110           0


Q ss_pred             cCCCCCCCCcHHHHHHHHHHHHHHhch-hhHHHHHHHHHHHHHHHHHHHhCCCEEe-cCC--CCCeEEEEEecCCCcchH
Q psy10669        190 VFPSLQGGPHNHAIGAIATAMLQAQSD-EFKSYQAQVKANASHLSDEMIKRGYHVV-TGG--TDVHLILIDLRKNKLTGS  265 (337)
Q Consensus       190 ~~p~~~g~~~~~~iaala~a~~e~~~~-~~~~y~~~v~~na~~l~~~L~~~G~~v~-~~~--t~~h~v~V~~~~~~~~~~  265 (337)
                      -.+...+||+.+.++++..|+.++.+. ..++..++..+++++|.+.|.+.|+-.. ...  .-.+++.+.+...+++ .
T Consensus       257 ~~~~~~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~iv~f~~~~~~~~-~  335 (386)
T 3qm2_A          257 DNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNSDFYRNDVAQANRSRMNVPFQLADNTLD-K  335 (386)
T ss_dssp             HC-------CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTCSSEECCBCGGGBCSSEEEEEESSGGGH-H
T ss_pred             hcCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHcCceEEEEECCCcccc-H
Confidence            012335799999999999999998765 5788999999999999999999876222 111  1234666666544555 4


Q ss_pred             HHHHHHhhcCceeccC----cccchhh
Q psy10669        266 KVELVLEEIAIACNKN----TGISLAA  288 (337)
Q Consensus       266 ~~~~~L~~~gI~v~~~----~girig~  288 (337)
                      .+-..|++.||.+.+-    .++|++.
T Consensus       336 ~~~~~L~~~gI~~~~g~~~~~~iRiS~  362 (386)
T 3qm2_A          336 VFLEESFAAGLHALKGHRVVGGMRASI  362 (386)
T ss_dssp             HHHHHHHHTTEECCBCCTTTCSEEEEC
T ss_pred             HHHHHHHHCCCEEeCCCCCcCeEEEEc
Confidence            5556688899998653    2788874

>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}

Probab=99.47  E-value=8.9e-12  Score=118.20  Aligned_cols=232  Identities=12%  Similarity=0.076  Sum_probs=150.1

Q ss_pred             CCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecC-CCchhHHHHHHhhC--
Q psy10669         41 FTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPY-SGSPANFAVCEKAL--  117 (337)
Q Consensus        41 ~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~-Sgt~AN~~v~~aLl--  117 (337)
                      ..+|.|.+++...+.+.+  +++.  .|   ....+++..+++.+++++|++.    .++.++ ||+.||..++.++.  
T Consensus        41 ~~~~~v~~a~~~~~~~~~--~~~~--~~---~~~~~~~~~l~~~la~~~~~~~----~~i~~~~ggt~a~~~~~~~~~~~  109 (397)
T 3f9t_A           41 NVLPITRKIVDIFLETNL--GDPG--LF---KGTKLLEEKAVALLGSLLNNKD----AYGHIVSGGTEANLMALRCIKNI  109 (397)
T ss_dssp             CCCTHHHHHHHHHTTCCT--TSGG--GB---HHHHHHHHHHHHHHHHHTTCTT----CEEEEESCHHHHHHHHHHHHHHH
T ss_pred             CCcHHHHHHHHHHHhhcC--CCcc--cC---hhHHHHHHHHHHHHHHHhCCCC----CCEEEecCcHHHHHHHHHHHHHH
Confidence            348999999987654322  2221  12   2345666667789999999986    355554 45889888877763  


Q ss_pred             -------------Cc-------------------------------------cc-----c-cccEEEEc-Ccc-cccccC
Q psy10669        118 -------------PT-------------------------------------NN-----A-RFDFLSSG-TTC-YSRCLD  139 (337)
Q Consensus       118 -------------~~-------------------------------------~~-----a-~pklII~~-~S~-~~~~~d  139 (337)
                                   ++                                     .+     . ++++|++. +++ .+...|
T Consensus       110 ~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~  189 (397)
T 3f9t_A          110 WREKRRKGLSKNEHPKIIVPITAHFSFEKGREMMDLEYIYAPIKEDYTIDEKFVKDAVEDYDVDGIIGIAGTTELGTIDN  189 (397)
T ss_dssp             HHHHHHTTCCCCSSCEEEEETTCCTHHHHHHHHHTCEEEEECBCTTSSBCHHHHHHHHHHSCCCEEEEEBSCTTTCCBCC
T ss_pred             HHhhhhhcccCCCCeEEEECCcchhHHHHHHHHcCceeEEEeeCCCCcCCHHHHHHHHhhcCCeEEEEECCCCCCCCCCC
Confidence                         11                                     00     1 35666655 333 457889


Q ss_pred             hHHHHHHhhhcCCeEEEeccccccccc----------------------eeeeeccC--------Cchhhh--hHHHHHh
Q psy10669        140 YARFRQICDETDSIMFADMSHISGLIA----------------------GVKGVTKT--------GEKILY--DYEEKIN  187 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~~Gli~----------------------g~~~T~~~--------Gg~i~~--~l~~~i~  187 (337)
                      +++|.++|+++|+++++|++|..|.++                      .+.++.+|        |++++.  .+.+.+.
T Consensus       190 l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~~~~g~~~~~~~~~~~~~~  269 (397)
T 3f9t_A          190 IEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSLGVDSITIDPHKMGHCPIPSGGILFKDIGYKRYLD  269 (397)
T ss_dssp             HHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGGTCSEEECCTTTTTCCCSSCEEEEESSGGGGGGTC
T ss_pred             HHHHHHHHHHhCCeEEEEccccchhhhhcccccccccccccccccccCCeEEEccccccCCCCCceEEEEeCHHHHHhhc
Confidence            999999999999999999999866442                      11222222        223333  2433332


Q ss_pred             hccCCCCC--------CCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecC
Q psy10669        188 NAVFPSLQ--------GGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRK  259 (337)
Q Consensus       188 ~~~~p~~~--------g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~  259 (337)
                      .. .|.+.        ++.....+++..+++..+....+++..+++.++.++|.+.|.+.|++++.. ...+++++.+..
T Consensus       270 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~~~~~  347 (397)
T 3f9t_A          270 VD-APYLTETRQATILGTRVGFGGACTYAVLRYLGREGQRKIVNECMENTLYLYKKLKENNFKPVIE-PILNIVAIEDED  347 (397)
T ss_dssp             EE-CTTSSSSEECSSCSSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBSSC-CSSSEEEEECTT
T ss_pred             cC-CccccCCCccccccccccchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEcC-CCccEEEEEeCC
Confidence            21 22221        344444566666666655555678899999999999999999999986643 456677666542


Q ss_pred             CCcchHHHHHHHhhcCceeccCc---ccchhhh
Q psy10669        260 NKLTGSKVELVLEEIAIACNKNT---GISLAAE  289 (337)
Q Consensus       260 ~~~~~~~~~~~L~~~gI~v~~~~---girig~~  289 (337)
                          ..++.+.|.+.||.+....   .+||+..
T Consensus       348 ----~~~~~~~l~~~gi~v~~~~~~~~~Ri~~~  376 (397)
T 3f9t_A          348 ----YKEVCKKLRDRGIYVSVCNCVKALRIVVM  376 (397)
T ss_dssp             ----HHHHHHHHHHTTCBCEECSSSSEEEEECC
T ss_pred             ----HHHHHHHHHhCCeEEeccCCCCEEEEEEc
Confidence                5677888888899987654   7888754

>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0

Probab=99.47  E-value=4.2e-12  Score=120.95  Aligned_cols=244  Identities=12%  Similarity=0.101  Sum_probs=159.9

Q ss_pred             cceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcC--CCCCCCcceeecCCC-
Q psy10669         31 NGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFN--LDPEQWGCNVQPYSG-  105 (337)
Q Consensus        31 ~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg--~~~~~~~~~v~~~Sg-  105 (337)
                      .-|.|...++-.  +|.|.+++...+.+. ..+++..        ..+++....+.+++.+|  .+.    .+|.+++| 
T Consensus        28 ~~i~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~--------~~~l~~~la~~l~~~~g~~~~~----~~i~~~~g~   94 (391)
T 3dzz_A           28 KELPMWIAEMDFKIAPEIMASMEEKLKVA-AFGYESV--------PAEYYKAVADWEEIEHRARPKE----DWCVFASGV   94 (391)
T ss_dssp             TCEECCSSCCSSCCCHHHHHHHHHHHTTC-CCCCBCC--------CHHHHHHHHHHHHHHHSCCCCG----GGEEEESCH
T ss_pred             CceeccccCCCCCCCHHHHHHHHHHHhcC-cCCCCCC--------CHHHHHHHHHHHHHHhCCCCCH----HHEEECCCH
Confidence            567777666544  899999998765431 1122111        24566555678888888  443    25777777 


Q ss_pred             chhHHHHHHhhCCc----------------------------------------------cc--ccccEEEEcCccc--c
Q psy10669        106 SPANFAVCEKALPT----------------------------------------------NN--ARFDFLSSGTTCY--S  135 (337)
Q Consensus       106 t~AN~~v~~aLl~~----------------------------------------------~~--a~pklII~~~S~~--~  135 (337)
                      +.|+..++.+++++                                              .+  .++++|++....+  +
T Consensus        95 ~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~p~nptG  174 (391)
T 3dzz_A           95 VPAISAMVRQFTSPGDQILVQEPVYNMFYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPHNPIG  174 (391)
T ss_dssp             HHHHHHHHHHHSCTTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEESSBTTTT
T ss_pred             HHHHHHHHHHhCCCCCeEEECCCCcHHHHHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEECCCCCCC
Confidence            78888888998754                                              00  1267776653332  3


Q ss_pred             cc---cChHHHHHHhhhcCCeEEEeccccccccce------------------eeeec-c----CC---chhhh---hHH
Q psy10669        136 RC---LDYARFRQICDETDSIMFADMSHISGLIAG------------------VKGVT-K----TG---EKILY---DYE  183 (337)
Q Consensus       136 ~~---~d~~~l~eia~~~ga~l~vD~AH~~Gli~g------------------~~~T~-~----~G---g~i~~---~l~  183 (337)
                      ..   .|+++|.++|+++|+++++|++|..+...|                  ++++. |    .|   |+++.   ++.
T Consensus       175 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~  254 (391)
T 3dzz_A          175 YAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPNPDLR  254 (391)
T ss_dssp             BCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCSHHHH
T ss_pred             cccCHHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEEEECCHHHH
Confidence            45   467778889999999999999998533321                  12232 2    22   66653   466


Q ss_pred             HHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCEEecCCCCCeEEEEEecCCC
Q psy10669        184 EKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYHVVTGGTDVHLILIDLRKNK  261 (337)
Q Consensus       184 ~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~v~~~~t~~h~v~V~~~~~~  261 (337)
                      +.+..........+++++..+++..++... ....++.++++.++.++|.+.|.+.  |+++... ..+..+++++...+
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~  332 (391)
T 3dzz_A          255 ARAEESFFLAGIGEPNLLAIPAAIAAYEEG-HDWLRELKQVLRDNFAYAREFLAKEVPEVKVLDS-NASYLAWVDISALG  332 (391)
T ss_dssp             HHHHHHHHHHTCSSCCTTHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCC-CBSSEEEEECGGGC
T ss_pred             HHHHHHHHhhccCCCCHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEecc-CceEEEEEehhhcC
Confidence            655543222223457777778777777663 2345788899999999999999984  9988752 34555668887666


Q ss_pred             cchHHHHHHH-hhcCceeccCc--------ccchhhh
Q psy10669        262 LTGSKVELVL-EEIAIACNKNT--------GISLAAE  289 (337)
Q Consensus       262 ~~~~~~~~~L-~~~gI~v~~~~--------girig~~  289 (337)
                      .+..++.+.| ++.||.+.+..        .+||+..
T Consensus       333 ~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~  369 (391)
T 3dzz_A          333 MNAEDFCKYLREKTGLIISAGNGYRGNGHEFVRINLA  369 (391)
T ss_dssp             SCHHHHHHHHHHHHCEECEESGGGCTTGGGEEEEECC
T ss_pred             CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec
Confidence            6788888888 58899998632        4677543

>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}

Probab=99.47  E-value=9.3e-12  Score=119.14  Aligned_cols=250  Identities=12%  Similarity=0.070  Sum_probs=152.5

Q ss_pred             HHHHHHHHHHhhcccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcC--CC
Q psy10669         17 ELYSLIKKEKHRQINGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFN--LD   92 (337)
Q Consensus        17 ~~~~~~~~e~~rq~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg--~~   92 (337)
                      ++++...+.....+..|.|...++-.  +|.|.+++...+.+. ..+++.      ..-..++.....+.+.+.+|  .+
T Consensus        18 ~~~~~~~~~~~~g~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~-~~~y~~------~~g~~~lr~~ia~~~~~~~g~~~~   90 (391)
T 3h14_A           18 DVMEAARRAEEAGRRIIHMEVGQPGTGAPRGAVEALAKSLETD-ALGYTV------ALGLPALRQRIARLYGEWYGVDLD   90 (391)
T ss_dssp             HHHHHHHHHHHTTCCCEECCCSSCSSCSCHHHHHHHHHHHC-----------------CCHHHHHHHHHHHHHHHCCCCC
T ss_pred             HHHHHHHHHHhcCCCeEEccCCCCCCCCCHHHHHHHHHHHhcC-CCCCCC------CCChHHHHHHHHHHHHHHhCCCCC
Confidence            44555444444455678888777766  789999998765431 112221      11123444333344555556  33


Q ss_pred             CCCCcceeecCCC-chhHHHHHHhhCCc-------------------------------------------ccccccEEE
Q psy10669         93 PEQWGCNVQPYSG-SPANFAVCEKALPT-------------------------------------------NNARFDFLS  128 (337)
Q Consensus        93 ~~~~~~~v~~~Sg-t~AN~~v~~aLl~~-------------------------------------------~~a~pklII  128 (337)
                      .    .+|.+++| +.|+..++.+++++                                           +.+++++|+
T Consensus        91 ~----~~v~~t~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~v~  166 (391)
T 3h14_A           91 P----GRVVITPGSSGGFLLAFTALFDSGDRVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQPVPADFAGLDLAGLM  166 (391)
T ss_dssp             G----GGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECCGGGTTSCCHHHHTTSCCSEEE
T ss_pred             H----HHEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCcccCCCCCHHHHHhcCCeEEE
Confidence            3    25777666 78988888998764                                           001367777


Q ss_pred             EcCccc--ccccC---hHHHHHHhhhcCCeEEEeccccccccc-------------eeeeec-c----CC---chhhh--
Q psy10669        129 SGTTCY--SRCLD---YARFRQICDETDSIMFADMSHISGLIA-------------GVKGVT-K----TG---EKILY--  180 (337)
Q Consensus       129 ~~~S~~--~~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~-------------g~~~T~-~----~G---g~i~~--  180 (337)
                      +..-.+  +...|   +++|.++|+++|+++++|++|......             .+++|. |    .|   |+++.  
T Consensus       167 i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~  246 (391)
T 3h14_A          167 VASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAVTALELTDECYVINSFSKYFSMTGWRVGWMVVPE  246 (391)
T ss_dssp             EESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCSSSEEEEESSSTTCCTTSCCEEEECCG
T ss_pred             ECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCcChhhcCCCEEEEEechhccCCccceeEEEEeCH
Confidence            653333  45565   667788999999999999999854432             123333 2    12   56554  


Q ss_pred             hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCC
Q psy10669        181 DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKN  260 (337)
Q Consensus       181 ~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~  260 (337)
                      ++.+.+.....+. ..++++...+++..++.  .....++.++++.++.++|.+.|.+.|+.....+..+..+++++...
T Consensus       247 ~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~--~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~  323 (391)
T 3h14_A          247 DQVRVVERIAQNM-FICAPHASQVAALAALD--CDAELQANLDVYKANRKLMLERLPKAGFTRIAPPDGAFYVYADVSDL  323 (391)
T ss_dssp             GGHHHHHHHHHHT-TCCCCHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHHHHHHHHTCCCBCCCCBTTEEEEECTTT
T ss_pred             HHHHHHHHHHhhh-ccCCCHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCeeEEEEEecCcc
Confidence            4666555443222 33556666666655554  22445788889999999999999998876543334456777888765


Q ss_pred             CcchHHHHHHHh-hcCceecc
Q psy10669        261 KLTGSKVELVLE-EIAIACNK  280 (337)
Q Consensus       261 ~~~~~~~~~~L~-~~gI~v~~  280 (337)
                      +.++.++.+.|. ++||.+.+
T Consensus       324 ~~~~~~~~~~l~~~~gi~v~~  344 (391)
T 3h14_A          324 TDDSRAFAAEILEKAGVAVTP  344 (391)
T ss_dssp             CSCHHHHHHHHHHHHCEECEE
T ss_pred             CCCHHHHHHHHHHHCCEEEcC
Confidence            567777777755 46999975

>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*

Probab=99.46  E-value=1.2e-12  Score=124.11  Aligned_cols=246  Identities=13%  Similarity=0.062  Sum_probs=159.1

Q ss_pred             cceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCc--cchHHHHHHHHHHHHHhhcCCCCCCCcce-eecCC-Cc
Q psy10669         31 NGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG--NQFIDEIEIVAQQRSLKAFNLDPEQWGCN-VQPYS-GS  106 (337)
Q Consensus        31 ~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G--~~~~~~lE~~~~~~~a~lfg~~~~~~~~~-v~~~S-gt  106 (337)
                      +.+++.+....+||.|++++...+.+ | .+.+++++-.+  .....++...+++++++++|++..   .+ +.+++ |+
T Consensus         4 ~~~l~~~~~~~~~~~v~~a~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~---~~~i~~t~g~t   78 (362)
T 2c0r_A            4 RAYNFNAGPAALPLEVLERAQAEFVD-Y-QHTGMSIMEMSHRGAVYEAVHNEAQARLLALLGNPTG---YKVLFIQGGAS   78 (362)
T ss_dssp             CCEECCSSSCCCCHHHHHHHHHTSSS-S-TTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHTTCCSS---EEEEEESSHHH
T ss_pred             ceeeccCCCCCCCHHHHHHHHHHHhh-h-hhcCccccccCCCcHHHHHHHHHHHHHHHHHhCCCCC---cEEEEECCCch
Confidence            46788889888999999999876543 3 23322211111  112234445667899999999741   13 45644 48


Q ss_pred             hhHHHHHHhhCCc-------------------------------c-------------cc---cccEEEEcCcc--cccc
Q psy10669        107 PANFAVCEKALPT-------------------------------N-------------NA---RFDFLSSGTTC--YSRC  137 (337)
Q Consensus       107 ~AN~~v~~aLl~~-------------------------------~-------------~a---~pklII~~~S~--~~~~  137 (337)
                      .||..++.+++++                               .             ++   +||+|++...+  .++.
T Consensus        79 ~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~i~~~t~~v~~~~~~n~tG~~  158 (362)
T 2c0r_A           79 TQFAMIPMNFLKEGQTANYVMTGSWASKALKEAKLIGDTHVAASSEASNYMTLPKLQEIQLQDNAAYLHLTSNETIEGAQ  158 (362)
T ss_dssp             HHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHHHSCEEEEEECGGGTTCSCCCGGGCCCCTTEEEEEEESEETTTTEE
T ss_pred             HHHHHHHHhcCCCCCeEEEEecCcHhHHHHHHHHHhCCeEEEecccccccccCCCHHHcccCCCcCEEEEeCCcCcccee
Confidence            8998889998754                               0             00   15666665322  3453


Q ss_pred             -cChHHHHHHhhhcCCeEEEeccccccccc-------eeeeecc-----CC-chhhh--hHHHHHhhc---cC-------
Q psy10669        138 -LDYARFRQICDETDSIMFADMSHISGLIA-------GVKGVTK-----TG-EKILY--DYEEKINNA---VF-------  191 (337)
Q Consensus       138 -~d~~~l~eia~~~ga~l~vD~AH~~Gli~-------g~~~T~~-----~G-g~i~~--~l~~~i~~~---~~-------  191 (337)
                       .|+++   |   +|+++++|++|..|...       .++++.+     .| |+++.  ++.+.+.+.   .+       
T Consensus       159 ~~~l~~---i---~~~~vivD~a~~~~~~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~~~~~l~~~~~~~~~~~~~~~  232 (362)
T 2c0r_A          159 FKAFPD---T---GSVPLIGDMSSDILSRPFDLNQFGLVYAGAQKNLGPSGVTVVIVREDLVAESPKHLPTMLRYDTYVK  232 (362)
T ss_dssp             CSSCCC---C---TTSCEEEECTTTTTSSCCCGGGCSEEEEETTTTTCCSSCEEEEEEGGGSSSCCTTSCGGGCHHHHHH
T ss_pred             cccccc---c---CCCEEEEEChhhccCCccchhHCcEEEEeccccccCcCcEEEEEcHHHHhhccccCchHHhHHHHhh
Confidence             34444   4   79999999999998764       2334433     35 66654  444333321   00       


Q ss_pred             -CCCCCCCcHHHHHHHHHHHHHHhch-hhHHHHHHHHHHHHHHHHHHHhCC-C-EEecCC--CCCeEEEEEecCCCcchH
Q psy10669        192 -PSLQGGPHNHAIGAIATAMLQAQSD-EFKSYQAQVKANASHLSDEMIKRG-Y-HVVTGG--TDVHLILIDLRKNKLTGS  265 (337)
Q Consensus       192 -p~~~g~~~~~~iaala~a~~e~~~~-~~~~y~~~v~~na~~l~~~L~~~G-~-~v~~~~--t~~h~v~V~~~~~~~~~~  265 (337)
                       ....++++.+.++++..++..+.+. ..++.+++..+++++|.+.|.+.| + ++....  ...+++++.+.. +.++.
T Consensus       233 ~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  311 (362)
T 2c0r_A          233 NNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRSDMNITFRLAS-EELEK  311 (362)
T ss_dssp             TTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSCGGGBCSSEEEEECSC-HHHHH
T ss_pred             ccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcCCccccCCChHHcCCcEEEEEcCC-cchHH
Confidence             1224689999999999999887543 468899999999999999999988 6 775311  124556666643 34677


Q ss_pred             HHHHHHhhcCceeccCc----ccchhh
Q psy10669        266 KVELVLEEIAIACNKNT----GISLAA  288 (337)
Q Consensus       266 ~~~~~L~~~gI~v~~~~----girig~  288 (337)
                      ++.+.|++.||.+.+..    +|||+.
T Consensus       312 ~~~~~L~~~gi~~~~g~~~~~~iRis~  338 (362)
T 2c0r_A          312 EFVKASEQEGFVGLKGHRSVGGLRASI  338 (362)
T ss_dssp             HHHHHHHHTTEESCBCCTTTCSEEEEC
T ss_pred             HHHHHHHHCCCeeccCCCCCCEEEEEC
Confidence            88889998999876432    578764

>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*

Probab=99.46  E-value=7e-12  Score=119.77  Aligned_cols=242  Identities=12%  Similarity=0.049  Sum_probs=160.5

Q ss_pred             cceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhH
Q psy10669         31 NGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPAN  109 (337)
Q Consensus        31 ~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN  109 (337)
                      +.+++.+.-..++|.|.+++...+.+.          |  +...+.....+++.+++++|.++.   .++.+++| +.|+
T Consensus        18 ~~~~~~~~p~~~~~~v~~a~~~~~~~~----------~--~~~~~~~~~~l~~~la~~~~~~~~---~~v~~~~g~t~al   82 (396)
T 2ch1_A           18 EKIMMGPGPSNCSKRVLTAMTNTVLSN----------F--HAELFRTMDEVKDGLRYIFQTENR---ATMCVSGSAHAGM   82 (396)
T ss_dssp             CCBCCSSSSCCCCHHHHHHTTSCCCCT----------T--CHHHHHHHHHHHHHHHHHHTCCCS---CEEEESSCHHHHH
T ss_pred             cceeecCCCCCCCHHHHHHhccccccC----------C--ChhHHHHHHHHHHHHHHHhCCCCC---cEEEECCcHHHHH
Confidence            445555555566999999987543211          1  122334444566799999998762   14766665 7899


Q ss_pred             HHHHHhhCCc-----------------------------------------cc-----c-cccEEEEcCc--ccccccCh
Q psy10669        110 FAVCEKALPT-----------------------------------------NN-----A-RFDFLSSGTT--CYSRCLDY  140 (337)
Q Consensus       110 ~~v~~aLl~~-----------------------------------------~~-----a-~pklII~~~S--~~~~~~d~  140 (337)
                      ..++.+++++                                         ++     . ++++|++..-  ..+...|+
T Consensus        83 ~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~  162 (396)
T 2ch1_A           83 EAMLSNLLEEGDRVLIAVNGIWAERAVEMSERYGADVRTIEGPPDRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQPL  162 (396)
T ss_dssp             HHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCC
T ss_pred             HHHHHHhcCCCCeEEEEcCCcccHHHHHHHHHcCCceEEecCCCCCCCCHHHHHHHHHhCCCCEEEEECCCCCCceecCH
Confidence            8888988754                                         00     1 3677777532  24678889


Q ss_pred             HHHHHHhhhcCCeEEEeccccccccc---------eeeee-cc-----CC-chhhh--hHHHHHhhc-------c-----
Q psy10669        141 ARFRQICDETDSIMFADMSHISGLIA---------GVKGV-TK-----TG-EKILY--DYEEKINNA-------V-----  190 (337)
Q Consensus       141 ~~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T-~~-----~G-g~i~~--~l~~~i~~~-------~-----  190 (337)
                      ++|.++|+++|+++++|++|..|...         .++++ +|     .| |+++.  ++.+.+...       .     
T Consensus       163 ~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~d~~~~s~~K~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (396)
T 2ch1_A          163 EGVGQICHQHDCLLIVDAVASLCGVPFYMDKWEIDAVYTGAQKVLGAPPGITPISISPKALDVIRNRRTKSKVFYWDLLL  242 (396)
T ss_dssp             TTHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCCEEECCCC-CCCCCSSCEEEEECHHHHHHHHTCSSCCSCGGGCHHH
T ss_pred             HHHHHHHHHcCCEEEEEccccccCCccchhhcCcCEEEEcCCccccCCCCeEEEEECHHHHHhhhhccCcccceEechHH
Confidence            99999999999999999999977543         12222 23     12 44433  344444321       0     


Q ss_pred             ----C------CCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCC---CCeEEEEEe
Q psy10669        191 ----F------PSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGT---DVHLILIDL  257 (337)
Q Consensus       191 ----~------p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t---~~h~v~V~~  257 (337)
                          +      ....++++.+.++++..++..+.+..+++.++++.++.+++.+.|.+.|+++.....   ..+++.+.+
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~  322 (396)
T 2ch1_A          243 LGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGKMGLDIFVKDPRHRLPTVTGIMI  322 (396)
T ss_dssp             HHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCBSSCSGGGBCTTEEEEEC
T ss_pred             HHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCCeeccCCccccCCceEEEEc
Confidence                1      123467888888888888887654456788999999999999999988998875211   123666766


Q ss_pred             cCCCcchHHHHHHHhh-cCceeccCc------ccchhh
Q psy10669        258 RKNKLTGSKVELVLEE-IAIACNKNT------GISLAA  288 (337)
Q Consensus       258 ~~~~~~~~~~~~~L~~-~gI~v~~~~------girig~  288 (337)
                      . .+.+..++.+.|.+ +||.+....      .+||+.
T Consensus       323 ~-~~~~~~~~~~~L~~~~gi~v~~g~~~~~~~~iRi~~  359 (396)
T 2ch1_A          323 P-KGVDWWKVSQYAMNNFSLEVQGGLGPTFGKAWRVGI  359 (396)
T ss_dssp             C-TTCCHHHHHHHHHHHHCBCCBCCCGGGTTTEEEEEC
T ss_pred             C-CCCCHHHHHHHHHHhCCEEEecCccccCCCEEEEEC
Confidence            4 35577888888865 699987632      678875

>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}

Probab=99.45  E-value=1.7e-11  Score=115.36  Aligned_cols=232  Identities=7%  Similarity=-0.042  Sum_probs=159.4

Q ss_pred             ccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-c
Q psy10669         30 INGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-S  106 (337)
Q Consensus        30 ~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t  106 (337)
                      ++.|.|...+|..  +|.|++++...+..  ..++|       .....++    ++.+++++|.+.    .++.+++| +
T Consensus        16 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~--~~~y~-------~~~~~~l----~~~la~~~~~~~----~~i~~~~g~~   78 (354)
T 3ly1_A           16 DNPIRINFNENPLGMSPKAQAAARDAVVK--ANRYA-------KNEILML----GNKLAAHHQVEA----PSILLTAGSS   78 (354)
T ss_dssp             SSCEECSSCCCSSCCCHHHHHHHHHTGGG--TTSCC-------HHHHHHH----HHHHHHHTTSCG----GGEEEESHHH
T ss_pred             CceEEccCCCCCCCCCHHHHHHHHHHHhh--CcCCC-------CCchHHH----HHHHHHHhCCCh----HHEEEeCChH
Confidence            4567787777775  89999999876542  11222       1122333    468899999865    35777666 7


Q ss_pred             hhHHHHHHhhCCc-------------------------------------------cc---ccccEEEEcCcc--ccccc
Q psy10669        107 PANFAVCEKALPT-------------------------------------------NN---ARFDFLSSGTTC--YSRCL  138 (337)
Q Consensus       107 ~AN~~v~~aLl~~-------------------------------------------~~---a~pklII~~~S~--~~~~~  138 (337)
                      .|+..++.+++++                                           .+   .++++|++....  .+...
T Consensus        79 ~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~v~l~~p~nptG~~~  158 (354)
T 3ly1_A           79 EGIRAAIEAYASLEAQLVIPELTYGDGEHFAKIAGMKVTKVKMLDNWAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGTIT  158 (354)
T ss_dssp             HHHHHHHHHHCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHHHTCSSCEEEEEESSCTTTCCCC
T ss_pred             HHHHHHHHHHhCCCCeEEECCCCchHHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhccCCCCCEEEEeCCCCCcCCCc
Confidence            8888888998654                                           01   236787775333  35788


Q ss_pred             ChHHHHHHhhh--cCCeEEEeccccccccc-----------------eeeeec-c-------CCchhhh--hHHHHHhhc
Q psy10669        139 DYARFRQICDE--TDSIMFADMSHISGLIA-----------------GVKGVT-K-------TGEKILY--DYEEKINNA  189 (337)
Q Consensus       139 d~~~l~eia~~--~ga~l~vD~AH~~Gli~-----------------g~~~T~-~-------~Gg~i~~--~l~~~i~~~  189 (337)
                      |.+++.+|++.  +|+++++|++|..+...                 .++++. |       ..|+++.  ++.+.+...
T Consensus       159 ~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~  238 (354)
T 3ly1_A          159 PADVIEPWIASKPANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAHPTVIALMGRY  238 (354)
T ss_dssp             CHHHHHHHHHTCCTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEECCHHHHHHHGGG
T ss_pred             CHHHHHHHHHhCCCCeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeecCHHHHHHHHHh
Confidence            88888888777  99999999999853332                 112232 2       1256554  577777766


Q ss_pred             cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHH
Q psy10669        190 VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVEL  269 (337)
Q Consensus       190 ~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~  269 (337)
                      ..+   .+++++..+++..++...  ...++.++++.++.++|.+.|.+.|+.+..  .....+++++..   +..++.+
T Consensus       239 ~~~---~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~--~~~~~~~~~~~~---~~~~~~~  308 (354)
T 3ly1_A          239 VAG---EKINFSGVDAALASMNDS--AFITYSKKSNDVSRQILLKALEDLKLPYLP--SEGNFVFHQLVV---PLKDYQT  308 (354)
T ss_dssp             TTC---SCCCHHHHHHHHHHTTCH--HHHHHHHHHHHHHHHHHHHHHHHHTCCBCC--CCSSEEEEECSS---CHHHHHH
T ss_pred             cCC---CCCCHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHHHHHHHCCCeECC--CCceEEEEECCC---CHHHHHH
Confidence            444   467778887777776543  345788899999999999999998988764  455567787764   6778888


Q ss_pred             HHhhcCceec-----cCcccchhh
Q psy10669        270 VLEEIAIACN-----KNTGISLAA  288 (337)
Q Consensus       270 ~L~~~gI~v~-----~~~girig~  288 (337)
                      .|.+.||.+.     ....+||+.
T Consensus       309 ~l~~~gi~v~g~~~~~~~~iRis~  332 (354)
T 3ly1_A          309 HMADAGVLIGRAFPPADNWCRISL  332 (354)
T ss_dssp             HHHHTTEECCCCCTTCTTEEEEEC
T ss_pred             HHHHCCEEEeecCCCCCCEEEEEc
Confidence            8988999988     112678863

>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0

Probab=99.45  E-value=1.3e-11  Score=116.82  Aligned_cols=232  Identities=11%  Similarity=0.067  Sum_probs=158.2

Q ss_pred             ccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-c
Q psy10669         30 INGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-S  106 (337)
Q Consensus        30 ~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t  106 (337)
                      +..|.|-..+|..  +|.|++++...+.. + .++|.       ....++    ++.+++++|.+.    .++.+++| +
T Consensus        32 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~-~-~~y~~-------~~~~~l----r~~la~~~~~~~----~~v~~~~g~t   94 (363)
T 3ffh_A           32 TKITKLSSNENPLGTSKKVAAIQANSSVE-T-EIYPD-------GWASSL----RKEVADFYQLEE----EELIFTAGVD   94 (363)
T ss_dssp             SCCEECSSCSCTTCCCHHHHHHHHTCBSC-C-CBC-----------CHHH----HHHHHHHHTCCG----GGEEEESSHH
T ss_pred             CceEEccCCCCCCCCCHHHHHHHHHHHHH-h-hcCCC-------cchHHH----HHHHHHHhCCCh----hhEEEeCCHH
Confidence            3567787777876  89999999765332 1 12221       112334    468889999865    25777666 7


Q ss_pred             hhHHHHHHhhCCc---------------------------------------cc-----ccccEEEEcCcc--cccccCh
Q psy10669        107 PANFAVCEKALPT---------------------------------------NN-----ARFDFLSSGTTC--YSRCLDY  140 (337)
Q Consensus       107 ~AN~~v~~aLl~~---------------------------------------~~-----a~pklII~~~S~--~~~~~d~  140 (337)
                      .|+..++.+++++                                       .+     .++++|++..-.  .+...|.
T Consensus        95 ~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~~  174 (363)
T 3ffh_A           95 ELIELLTRVLLDTTTNTVMATPTFVQYRQNALIEGAEVREIPLLQDGEHDLEGMLNAIDEKTTIVWICNPNNPTGNYIEL  174 (363)
T ss_dssp             HHHHHHHHHHCSTTCEEEEEESSCHHHHHHHHHHTCEEEEEECCTTSCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCH
T ss_pred             HHHHHHHHHHccCCCEEEEcCCChHHHHHHHHHcCCEEEEecCCCCCCcCHHHHHHhcccCCCEEEEeCCCCCcCCCcCH
Confidence            8888888888654                                       00     126777775333  4688899


Q ss_pred             HHHHHHhhhc--CCeEEEeccccccccc---------------eeeeec-c----CC---chhhh--hHHHHHhhccCCC
Q psy10669        141 ARFRQICDET--DSIMFADMSHISGLIA---------------GVKGVT-K----TG---EKILY--DYEEKINNAVFPS  193 (337)
Q Consensus       141 ~~l~eia~~~--ga~l~vD~AH~~Gli~---------------g~~~T~-~----~G---g~i~~--~l~~~i~~~~~p~  193 (337)
                      +++.+|++.+  |+++++|++|.-+..+               .+.+|. |    .|   |+++.  ++.+.+.....+ 
T Consensus       175 ~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~-  253 (363)
T 3ffh_A          175 ADIQAFLDRVPSDVLVVLDEAYIEYVTPQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIADKEIIRQLNIVRPP-  253 (363)
T ss_dssp             HHHHHHHTTSCTTSEEEEECTTGGGCSSCCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEECHHHHHHHHHTCCS-
T ss_pred             HHHHHHHHhCCCCcEEEEeCchHhhcCccccCHHHHhhcCCCEEEEeechhhhcCchhceeeeecCHHHHHHHHHhCCC-
Confidence            9999998877  9999999999943221               123333 2    12   56654  577777665433 


Q ss_pred             CCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-CCCEEecCCCCCeEEEEEecCCCcchHHHHHHHh
Q psy10669        194 LQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-RGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLE  272 (337)
Q Consensus       194 ~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~  272 (337)
                        .+++....+++..++...  ...++.++++.++.++|.+.|.+ .|+++..  ++...+++.+..   +..++.+.|.
T Consensus       254 --~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~--~~~~~~~~~~~~---~~~~~~~~l~  324 (363)
T 3ffh_A          254 --FNTTSIGQKLAIEAIKDQ--AFIGECRTSNANGIKQYEAFAKRFEKVKLYP--ANGNFVLIDLGI---EAGTIFSYLE  324 (363)
T ss_dssp             --CCCBHHHHHHHHHHHHCH--HHHHHHHHHHHHHHHHHHHHHHHCTTCEECC--CCSSEEEEECSS---CHHHHHHHHH
T ss_pred             --CCCCHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHHHHHhhCCCceECC--CCCeEEEEECCC---CHHHHHHHHH
Confidence              367778888777777532  34578889999999999999999 8999875  445567787764   6788888888


Q ss_pred             hcCceeccCc------ccchhh
Q psy10669        273 EIAIACNKNT------GISLAA  288 (337)
Q Consensus       273 ~~gI~v~~~~------girig~  288 (337)
                      +.||.+.+..      .+||+.
T Consensus       325 ~~gi~v~~g~~~~~~~~iRis~  346 (363)
T 3ffh_A          325 KNGYITRSGAALGFPTAVRITI  346 (363)
T ss_dssp             HTTEECEETTTTTCTTEEEEEC
T ss_pred             HCCeEEEeCccCCCCCeEEEEC
Confidence            8899988633      567753

>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3

Probab=99.45  E-value=3.6e-12  Score=122.71  Aligned_cols=237  Identities=12%  Similarity=0.089  Sum_probs=154.9

Q ss_pred             CCCCCHHHHHHHhhhhhhccCCCCCCC--cCcCcc-chHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHH
Q psy10669         39 ENFTSLAVLECLGSCLQNKYSEGLPGK--RYYGGN-QFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCE  114 (337)
Q Consensus        39 en~~~p~V~~a~~~~l~~~y~~g~~g~--r~~~G~-~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~  114 (337)
                      ....+|.|.+++...+...|  |++..  ++..|. ....++    ++.+++++|++.    .+|.+++| +.++..++.
T Consensus        37 ~~~~~~~v~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~~~l----~~~la~~~g~~~----~~v~~~~g~t~al~~al~  106 (416)
T 1qz9_A           37 LGARPVAALARAQAVIAEEW--GNGLIRSWNSAGWRDLSERL----GNRLATLIGARD----GEVVVTDTTSINLFKVLS  106 (416)
T ss_dssp             SCCCBTTHHHHHHHHHHTCC--CCCGGGHHHHTSGGGHHHHH----HHHHHTTTTCCT----TSEEECSCHHHHHHHHHH
T ss_pred             cCCCcHHHHHHHHHHHHHHH--hccCccccchhhHHHHHHHH----HHHHHHHcCCCc----ccEEEeCChhHHHHHHHH
Confidence            34568999999987765433  32221  111122 222344    468899999874    25777777 455544555


Q ss_pred             hhC------Cc-----------------------c----c---------c--------cccEEEEcCcc--cccccChHH
Q psy10669        115 KAL------PT-----------------------N----N---------A--------RFDFLSSGTTC--YSRCLDYAR  142 (337)
Q Consensus       115 aLl------~~-----------------------~----~---------a--------~pklII~~~S~--~~~~~d~~~  142 (337)
                      +++      ++                       +    -         .        ++++|++..-.  .+...|+++
T Consensus       107 ~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~  186 (416)
T 1qz9_A          107 AALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDSPEELPQAIDQDTAVVMLTHVNYKTGYMHDMQA  186 (416)
T ss_dssp             HHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESSGGGHHHHCSTTEEEEEEESBCTTTCBBCCHHH
T ss_pred             hhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceEEEeCcHHHHHHHhCCCceEEEEeccccCcccccCHHH
Confidence            543      32                       0    0         0        15677776433  268889999


Q ss_pred             HHHHhhhcCCeEEEeccccccccc---------eeeeec-c------CC-chhhh--hHHHHHhhccCC-----------
Q psy10669        143 FRQICDETDSIMFADMSHISGLIA---------GVKGVT-K------TG-EKILY--DYEEKINNAVFP-----------  192 (337)
Q Consensus       143 l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T~-~------~G-g~i~~--~l~~~i~~~~~p-----------  192 (337)
                      |.++|+++|+++++|++|+.|...         .++++. |      .+ |+++.  ++.+.+.+....           
T Consensus       187 i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~~K~l~~g~~~~g~l~~~~~~~~~l~~~~~g~~g~~~~~~~~  266 (416)
T 1qz9_A          187 LTALSHECGALAIWDLAHSAGAVPVDLHQAGADYAIGCTYKYLNGGPGSQAFVWVSPQLCDLVPQPLSGWFGHSRQFAME  266 (416)
T ss_dssp             HHHHHHHHTCEEEEECTTTTTTSCCCHHHHTCSEEEECSSSTTCCCTTCCCEEEECTTTTTTSCCSCCCGGGBCTTSCCC
T ss_pred             HHHHHHHcCCEEEEEccccccCcCCChhhcCCCEEEecCcccCCCCCCCeEEEEECHHHHhccCCCccccCccccccCCC
Confidence            999999999999999999987664         123332 2      23 55544  344444332111           


Q ss_pred             -----------CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC----CCEEecCC---CCCeEEE
Q psy10669        193 -----------SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR----GYHVVTGG---TDVHLIL  254 (337)
Q Consensus       193 -----------~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~----G~~v~~~~---t~~h~v~  254 (337)
                                 ...++++++.++++..++..+.+...++.++++.++.++|.+.|.+.    |+++....   ...++++
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~  346 (416)
T 1qz9_A          267 PRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTDLFIELVEQRCAAHELTLVTPREHAKRGSHVS  346 (416)
T ss_dssp             SSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHTTSCCEECSCSSGGGBCSEEE
T ss_pred             CccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhccCCCeEEeCCCCHHHcCCEEE
Confidence                       12467899999999888888754456788999999999999999885    89987532   1356777


Q ss_pred             EEecCCCcchHHHHHHHhhcCceeccC--cccchhhh
Q psy10669        255 IDLRKNKLTGSKVELVLEEIAIACNKN--TGISLAAE  289 (337)
Q Consensus       255 V~~~~~~~~~~~~~~~L~~~gI~v~~~--~girig~~  289 (337)
                      +.+.+    ..++.+.|.+.||.+...  ..+||+..
T Consensus       347 ~~~~~----~~~l~~~l~~~gi~~~~~~~~~lRis~~  379 (416)
T 1qz9_A          347 FEHPE----GYAVIQALIDRGVIGDYREPRIMRFGFT  379 (416)
T ss_dssp             EECTT----HHHHHHHHHTTTEECEEETTTEEEEECC
T ss_pred             EecCC----HHHHHHHHHhCCcEeccCCCCeEEEeCc
Confidence            76642    567888888889998642  27888754

>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*

Probab=99.44  E-value=4.9e-12  Score=119.93  Aligned_cols=230  Identities=13%  Similarity=0.074  Sum_probs=154.5

Q ss_pred             cCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHhh
Q psy10669         38 SENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEKA  116 (337)
Q Consensus        38 sen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~aL  116 (337)
                      +....+|.|++++...+.+.  .+++++.+..+. ...+....+++.+++++|.+.    .++.+++| +.|+..++.++
T Consensus         8 ~~~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~l~~~la~~~g~~~----~~v~~~~g~t~a~~~~~~~l   80 (382)
T 4eb5_A            8 SAKPVDERILEAMLPYMTES--FGNPSSVHSYGF-KAREAVQEAREKVAKLVNGGG----GTVVFTSGATEANNLAIIGY   80 (382)
T ss_dssp             TCCCCCHHHHHHHHHHHHTS--CCCTTCSSHHHH-HHHHHHHHHHHHHHHHHTCTT----EEEEEESSHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHhc--cCCCCCCcHHHH-HHHHHHHHHHHHHHHHhCCCC----CeEEEcCchHHHHHHHHHHH
Confidence            34467999999998876542  355655443332 223344445678999999875    25666555 88988888888


Q ss_pred             C----Cc------------------------------------------cc--c---cccEEEEcCccc--ccccChHHH
Q psy10669        117 L----PT------------------------------------------NN--A---RFDFLSSGTTCY--SRCLDYARF  143 (337)
Q Consensus       117 l----~~------------------------------------------~~--a---~pklII~~~S~~--~~~~d~~~l  143 (337)
                      .    ++                                          .+  +   ++++|++..-.+  +...|+++|
T Consensus        81 ~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i  160 (382)
T 4eb5_A           81 AMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQPVEEI  160 (382)
T ss_dssp             HHHHGGGCCEEEEETTCCHHHHHHHHHHTTTTCEEEEECBCTTSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCCHHHH
T ss_pred             HhhccCCCCEEEECCCcchHHHHHHHHHHhCCcEEEEeccCCCCccCHHHHHHHhcCCCeEEEEeccCCCccccCCHHHH
Confidence            6    43                                          00  0   267777763332  688899999


Q ss_pred             HHHhhhcCCeEEEeccccccccc---------eeeeec-c----CC-chhhh--hHHHHHhhccC------CCCCCCCcH
Q psy10669        144 RQICDETDSIMFADMSHISGLIA---------GVKGVT-K----TG-EKILY--DYEEKINNAVF------PSLQGGPHN  200 (337)
Q Consensus       144 ~eia~~~ga~l~vD~AH~~Gli~---------g~~~T~-~----~G-g~i~~--~l~~~i~~~~~------p~~~g~~~~  200 (337)
                      .++|+++|++ ++|++|..|...         .++++. |    .| |+++.  +.  .+.+...      ....++++.
T Consensus       161 ~~l~~~~~~~-i~D~a~~~g~~~~~~~~~~~di~~~s~sK~~g~~g~G~~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~  237 (382)
T 4eb5_A          161 SEVLAGKAAL-HIDATASVGQIEVDVEKIGADMLTISSNDIYGPKGVGALWIRKEA--KLQPVILGGGQENGLRSGSENV  237 (382)
T ss_dssp             HHHHTTSSEE-EEECTTTBTTBCCCHHHHTCSEEEEETGGGTCCSSCEEEEEETTC--CCCCSSCSSCTGGGTSCSCCCH
T ss_pred             HHHHHHCCCE-EEEcchhcCCcccCccccCCCEEEeehHHhcCCCceEEEEEcccc--ccCceecCCCccccccCCCccH
Confidence            9999999999 999999987653         123333 2    23 44433  22  1222211      122467888


Q ss_pred             HHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCC--CCeEEEEEecCCCcchHHHHHHHhhcCce
Q psy10669        201 HAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGT--DVHLILIDLRKNKLTGSKVELVLEEIAIA  277 (337)
Q Consensus       201 ~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t--~~h~v~V~~~~~~~~~~~~~~~L~~~gI~  277 (337)
                      +.++++..++..+. ..+++.++++.++.++|.+.|.+. |+++.....  ..+++.+.+.  +.+..++.+.|.+.||.
T Consensus       238 ~~~~~~~~al~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~gi~  314 (382)
T 4eb5_A          238 PSIVGFGKAAEITA-MEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFS--YIEGESIVLSLDMAGIQ  314 (382)
T ss_dssp             HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEET--TSCHHHHHHHHHHHTCB
T ss_pred             HHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCcccCCCCEEEEEeC--CcCHHHHHHHHHHCCEE
Confidence            88888888887764 356788999999999999999885 888765211  1456667665  45678888888888999


Q ss_pred             ecc
Q psy10669        278 CNK  280 (337)
Q Consensus       278 v~~  280 (337)
                      +..
T Consensus       315 v~~  317 (382)
T 4eb5_A          315 AST  317 (382)
T ss_dssp             CBC
T ss_pred             Eec
Confidence            875

>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*

Probab=99.44  E-value=7.6e-12  Score=121.64  Aligned_cols=236  Identities=11%  Similarity=0.118  Sum_probs=142.0

Q ss_pred             ceeeeccCCC---CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhh----cCCCCCCCcceeecCC
Q psy10669         32 GIELIASENF---TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKA----FNLDPEQWGCNVQPYS  104 (337)
Q Consensus        32 ~i~l~asen~---~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~l----fg~~~~~~~~~v~~~S  104 (337)
                      .+.-+.++++   .+|.|.+++...+. +++.+....+ |+......+++    +.++++    ++.+.    .+|.+++
T Consensus        57 ~~i~l~~~~~~~~~~~~v~~a~~~~~~-~~~~~~~~~~-y~~~~g~~~l~----~~ia~~~~~~~~~~~----~~i~~t~  126 (432)
T 3ei9_A           57 QVISLGIGDTTEPIPEVITSAMAKKAH-ELSTIEGYSG-YGAEQGAKPLR----AAIAKTFYGGLGIGD----DDVFVSD  126 (432)
T ss_dssp             CCEECSSCCCCSCCCHHHHHHHHHHHH-HTTSTTTCCC-CCCTTCCHHHH----HHHHHHHHTTTTCCG----GGEEEES
T ss_pred             CeEEccCCCCCCCCCHHHHHHHHHHHh-cccccCCccC-CCCCCCCHHHH----HHHHHHHHccCCCCc----ceEEECC
Confidence            3444444454   38999999987644 3332222222 32222334555    344455    46654    3689999


Q ss_pred             CchhHHHHHHhhCCc---------------------c-----------------------------cc---cccEEEEc-
Q psy10669        105 GSPANFAVCEKALPT---------------------N-----------------------------NA---RFDFLSSG-  130 (337)
Q Consensus       105 gt~AN~~v~~aLl~~---------------------~-----------------------------~a---~pklII~~-  130 (337)
                      |+..++.++.+++++                     .                             +.   ++++|++. 
T Consensus       127 G~~~al~~l~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~l~~  206 (432)
T 3ei9_A          127 GAKCDISRLQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLSTVGRTDIIFFCS  206 (432)
T ss_dssp             CHHHHHHHHHHHHCTTCCEEEEESCCTHHHHHHHHHTCSCCEETTTTEETTCEEEECCGGGTTSCCGGGCCCCSEEEEES
T ss_pred             ChHHHHHHHHHHcCCCCEEEEeCCCCHHHHHHHHHcCCcccccccccccCceEEeccCcccCCcCChhhCCCCCEEEEeC
Confidence            976655556777543                     0                             00   15777664 


Q ss_pred             Ccc-cccccC---hHHHHHHhhhcCCeEEEeccccccccc----------------eeeeec-c----CC---chhhh--
Q psy10669        131 TTC-YSRCLD---YARFRQICDETDSIMFADMSHISGLIA----------------GVKGVT-K----TG---EKILY--  180 (337)
Q Consensus       131 ~S~-~~~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~----------------g~~~T~-~----~G---g~i~~--  180 (337)
                      +.+ .+...+   +++|.++|+++|++|++|++|.-+..+                .+++|. |    .|   |+++.  
T Consensus       207 p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G~~~~~~  286 (432)
T 3ei9_A          207 PNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTVIPK  286 (432)
T ss_dssp             SCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCCSSGGGSTTGGGTEEEEEESHHHHCTTTTCCEEEECCT
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCCCChhhcCCCCCeEEEEecchhccCCcccceEEEEECh
Confidence            222 234444   455667799999999999999854333                123333 2    24   66654  


Q ss_pred             hH--------HHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeE
Q psy10669        181 DY--------EEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHL  252 (337)
Q Consensus       181 ~l--------~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~  252 (337)
                      ++        .+.+.... ....++++++..++...++........++.++++.++.++|.+.|.+.|+++..+ ..+..
T Consensus       287 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~  364 (432)
T 3ei9_A          287 KLLYSDGFPVAKDFNRII-CTCFNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSLGYDVYGG-KNAPY  364 (432)
T ss_dssp             TCBCTTSCBHHHHHHHHH-HHSCCCSCHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEC-SSSSE
T ss_pred             HHhhcchHHHHHHHHHHh-ccccCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHCCceecCC-CcceE
Confidence            34        45554331 1224467777777666665422123457888999999999999999999988752 45667


Q ss_pred             EEEEecCCCcchHHHHH-HHhhcCceeccC
Q psy10669        253 ILIDLRKNKLTGSKVEL-VLEEIAIACNKN  281 (337)
Q Consensus       253 v~V~~~~~~~~~~~~~~-~L~~~gI~v~~~  281 (337)
                      +++++.  +.+..++.. .++++||.+.+-
T Consensus       365 ~~~~~~--~~~~~~~~~~ll~~~gv~v~~g  392 (432)
T 3ei9_A          365 VWVHFP--NQSSWDVFAEILEKTHVVTTPG  392 (432)
T ss_dssp             EEEECT--TSCHHHHHHHHHHHHCEECEEG
T ss_pred             EEEECC--CCCHHHHHHHHHHHCCEEEeCc
Confidence            888887  345555554 455679998863

>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*

Probab=99.42  E-value=2.2e-12  Score=122.07  Aligned_cols=225  Identities=12%  Similarity=0.053  Sum_probs=146.9

Q ss_pred             cCCCCCHHHHHHHhhhhhhccCCCCC--CCcCcCccchHHHHHHHHHHH-HHhhcCCCCCCCcceeecCCC-chhHHHHH
Q psy10669         38 SENFTSLAVLECLGSCLQNKYSEGLP--GKRYYGGNQFIDEIEIVAQQR-SLKAFNLDPEQWGCNVQPYSG-SPANFAVC  113 (337)
Q Consensus        38 sen~~~p~V~~a~~~~l~~~y~~g~~--g~r~~~G~~~~~~lE~~~~~~-~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~  113 (337)
                      +.+..+|.|.+++...+...+..+++  ....+.......+++    +. +++++|.+      ++.+++| +.|+..++
T Consensus        17 ~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~la~~~~~~------~v~~~~g~t~a~~~~~   86 (371)
T 2e7j_A           17 TGGKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFI----HNQLPKFLGCD------VARVTNGAREAKFAVM   86 (371)
T ss_dssp             HTCCCCHHHHHHHHHC--------------------CCHHHHH----HTHHHHHTTSS------EEEEESSHHHHHHHHH
T ss_pred             cCCCCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHH----HHHHHHHcCCC------EEEEeCChHHHHHHHH
Confidence            35667999999998764432110111  111111223334444    57 89999986      4777777 78998888


Q ss_pred             HhhCCc----------------------------c--c---------------------ccccEEEEcCcc--cccccCh
Q psy10669        114 EKALPT----------------------------N--N---------------------ARFDFLSSGTTC--YSRCLDY  140 (337)
Q Consensus       114 ~aLl~~----------------------------~--~---------------------a~pklII~~~S~--~~~~~d~  140 (337)
                      .+++++                            .  .                     .++++|++..-.  .+...|+
T Consensus        87 ~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~~~~nptG~~~~~  166 (371)
T 2e7j_A           87 HSLAKKDAWVVMDENCHYSSYVAAERAGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALITYPDGNYGNLPDV  166 (371)
T ss_dssp             HHHCCTTCEEEEETTCCHHHHHHHHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEEESSCTTTCCCCCH
T ss_pred             HHHhCCCCEEEEccCcchHHHHHHHHcCCeEEEeecccCCCCCcCHHHHHHHHHhhcccCCeEEEEEECCCCCCcccCCH
Confidence            988654                            1  0                     125677765322  4688899


Q ss_pred             HHHHHHhhhcCCeEEEeccccccccc---------eeeeec-c------CCchhhh--hHHHH-HhhccCCCC------C
Q psy10669        141 ARFRQICDETDSIMFADMSHISGLIA---------GVKGVT-K------TGEKILY--DYEEK-INNAVFPSL------Q  195 (337)
Q Consensus       141 ~~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~T~-~------~Gg~i~~--~l~~~-i~~~~~p~~------~  195 (337)
                      ++|.++|+++|+++++|++|+.|...         .++++. |      .+|+++.  ++.+. +.+....+.      .
T Consensus       167 ~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~sK~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (371)
T 2e7j_A          167 KKIAKVCSEYDVPLLVNGAYAIGRMPVSLKEIGADFIVGSGHKSMAASGPIGVMGMKEEWAEIVLRRSEKYKNKEVELLG  246 (371)
T ss_dssp             HHHHHHHHTTTCCEEEECTTTBTTBCCCHHHHTCSEEEEEHHHHSSCCSSCEEEEECTTTTTTTTCBCSSCTTSBGGGTT
T ss_pred             HHHHHHHHHcCCeEEEECccccCCCCCChhhcCCCEEEecCCcCCCCCCCcEEEEEechhhhhhccccccCccccccccc
Confidence            99999999999999999999998764         123332 2      2366655  45455 554332222      4


Q ss_pred             CCCcHHHHHHHHHHHHHHhchhhHHHHHHH--HHHHHHHHHHHHhCCCEEecCC-CCCeEEEEEecCCCcchHHHHHHHh
Q psy10669        196 GGPHNHAIGAIATAMLQAQSDEFKSYQAQV--KANASHLSDEMIKRGYHVVTGG-TDVHLILIDLRKNKLTGSKVELVLE  272 (337)
Q Consensus       196 g~~~~~~iaala~a~~e~~~~~~~~y~~~v--~~na~~l~~~L~~~G~~v~~~~-t~~h~v~V~~~~~~~~~~~~~~~L~  272 (337)
                      +++++..++++..++..+..    ++.+++  .++.++|.+.|.+.|+++.... ..++++++.+.    +..++.+.|.
T Consensus       247 ~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~  318 (371)
T 2e7j_A          247 CTARGATIITLMASFPHVRE----RIKRWDEEVEKARRFAAEMEKLGIKQLGDNPHNHDLMFFHAE----VLYEISKKAK  318 (371)
T ss_dssp             CCCCSHHHHHHHHHHHHHHH----HGGGHHHHHHHHHHHHHHHHHTTCEEESSSSCCSSEEEEECH----HHHHHHHHSS
T ss_pred             CCcCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHcCcEEecCCCccCceEEEECC----CHHHHHHHHH
Confidence            67788888888888776532    667788  8999999999999999987521 14678888875    5677778888


Q ss_pred             hcCceecc
Q psy10669        273 EIAIACNK  280 (337)
Q Consensus       273 ~~gI~v~~  280 (337)
                      +.||.+.+
T Consensus       319 ~~gi~~~~  326 (371)
T 2e7j_A          319 GGRFFLYR  326 (371)
T ss_dssp             SGGGHHHH
T ss_pred             HCCEEEEe
Confidence            88998764

>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*

Probab=99.42  E-value=3.2e-11  Score=115.19  Aligned_cols=246  Identities=16%  Similarity=0.109  Sum_probs=152.7

Q ss_pred             ccceeeeccCCC--CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCC--CCCCCcce-eecCC
Q psy10669         30 INGIELIASENF--TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNL--DPEQWGCN-VQPYS  104 (337)
Q Consensus        30 ~~~i~l~asen~--~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~--~~~~~~~~-v~~~S  104 (337)
                      ...|.|...++-  .+|.|.+++...+.+. ..+      |.......+++....+.+.+.+|.  +..    + +.+++
T Consensus        26 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~------y~~~~g~~~l~~~la~~~~~~~g~~~~~~----~~v~~~~   94 (389)
T 1gd9_A           26 KDVISLGIGEPDFDTPQHIKEYAKEALDKG-LTH------YGPNIGLLELREAIAEKLKKQNGIEADPK----TEIMVLL   94 (389)
T ss_dssp             SSCEECCCCSCSSCCCHHHHHHHHHHHHTT-CCS------CCCTTCCHHHHHHHHHHHHHHHCCCCCTT----TSEEEES
T ss_pred             cCeEecCCCCCCCCCCHHHHHHHHHHHhCC-CCC------CCCCCCcHHHHHHHHHHHHHHhCCCCCCC----CeEEEcC
Confidence            456777776664  3899999998765431 112      222222345554333455555584  332    4 55655


Q ss_pred             C-chhHHHHHHhhCCc-------------------------------c----------c--c---cccEEEEcCcc--cc
Q psy10669        105 G-SPANFAVCEKALPT-------------------------------N----------N--A---RFDFLSSGTTC--YS  135 (337)
Q Consensus       105 g-t~AN~~v~~aLl~~-------------------------------~----------~--a---~pklII~~~S~--~~  135 (337)
                      | +.|+..++.+++++                               .          +  +   ++++|++..-.  .+
T Consensus        95 g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG  174 (389)
T 1gd9_A           95 GANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDELKKYVTDKTRALIINSPCNPTG  174 (389)
T ss_dssp             STTHHHHHHHTTTCCTTCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCHHHHHHHCCTTEEEEEEESSCTTTC
T ss_pred             ChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCCccCCCCCHHHHHHhcCcCceEEEEECCCCCCC
Confidence            5 88998888888654                               0          0  0   25766664222  23


Q ss_pred             ccc---ChHHHHHHhhhcCCeEEEeccccccccc-----------------eeeeeccC-----C---chhhh--hHHHH
Q psy10669        136 RCL---DYARFRQICDETDSIMFADMSHISGLIA-----------------GVKGVTKT-----G---EKILY--DYEEK  185 (337)
Q Consensus       136 ~~~---d~~~l~eia~~~ga~l~vD~AH~~Gli~-----------------g~~~T~~~-----G---g~i~~--~l~~~  185 (337)
                      ...   ++++|.++|+++|+++++|++|..+...                 .+++|.+|     |   |+++.  ++.+.
T Consensus       175 ~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~  254 (389)
T 1gd9_A          175 AVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWIIER  254 (389)
T ss_dssp             CCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGGCCEEEECCHHHHHH
T ss_pred             cCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEecChhhcCCcccceEEEEECHHHHHH
Confidence            444   5788889999999999999999876542                 01233322     2   55554  56666


Q ss_pred             HhhccCCCCCCCCcHHHHHHHHHHHHHHhc-hhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcch
Q psy10669        186 INNAVFPSLQGGPHNHAIGAIATAMLQAQS-DEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTG  264 (337)
Q Consensus       186 i~~~~~p~~~g~~~~~~iaala~a~~e~~~-~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~  264 (337)
                      +.....+ ...+++++..+++..++..... ...++.++++.++.++|.+.|.+.|+++..+ ..+..+++++...+.+.
T Consensus       255 l~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~~~~~~~~~~  332 (389)
T 1gd9_A          255 MVKFQMY-NATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEMGLPTVKP-KGAFYIFPRIRDTGLTS  332 (389)
T ss_dssp             HHHHHTT-TTCSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCC-CBTTEECCBCGGGTCCH
T ss_pred             HHHHHhh-hccCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHcCCeecCC-CeeeEEEEeccCCCCCH
Confidence            6654332 2345666666666666644321 1346778889999999999999989887642 23445666775434567


Q ss_pred             HHHHHHHh-hcCceeccCc--------ccchhh
Q psy10669        265 SKVELVLE-EIAIACNKNT--------GISLAA  288 (337)
Q Consensus       265 ~~~~~~L~-~~gI~v~~~~--------girig~  288 (337)
                      .++.+.|. +.||.+.+..        .+||+.
T Consensus       333 ~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~  365 (389)
T 1gd9_A          333 KKFSELMLKEARVAVVPGSAFGKAGEGYVRISY  365 (389)
T ss_dssp             HHHHHHHHHHTCEECEEGGGGCGGGTTBEEEEC
T ss_pred             HHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEe
Confidence            77888886 7899987532        467764

>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*

Probab=99.42  E-value=2e-11  Score=117.06  Aligned_cols=219  Identities=14%  Similarity=0.121  Sum_probs=145.8

Q ss_pred             ccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhh
Q psy10669         37 ASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKA  116 (337)
Q Consensus        37 asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aL  116 (337)
                      .+...++|.+++++...+...        + |.......++|    +.+++++|.++     .+.++|||.||..++.++
T Consensus         8 ~~~~~~~~~~~~a~~~~~~~~--------~-~~~~~~~~~l~----~~la~~~~~~~-----~i~~~sGt~a~~~al~~~   69 (390)
T 3b8x_A            8 LASSTWDDLEYKAIQSVLDSK--------M-FTMGEYVKQYE----TQFAKTFGSKY-----AVMVSSGSTANLLMIAAL   69 (390)
T ss_dssp             SCCCCCCHHHHHHHHHHHHHT--------C-CSSCHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHHHT
T ss_pred             CCCCCCCHHHHHHHHHHHHcC--------C-CCCChHHHHHH----HHHHHHHCCCc-----EEEECCHHHHHHHHHHHH
Confidence            466788999999998765431        1 22233445555    68899999874     688899999998888888


Q ss_pred             -------CCc--------------------------------c--------c----c-cccEEEEcCcccccccChHHHH
Q psy10669        117 -------LPT--------------------------------N--------N----A-RFDFLSSGTTCYSRCLDYARFR  144 (337)
Q Consensus       117 -------l~~--------------------------------~--------~----a-~pklII~~~S~~~~~~d~~~l~  144 (337)
                             +++                                .        +    . ++++|++.+ .++.+.|+++|.
T Consensus        70 ~~~~~~~~~~g~~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~-~~g~~~~~~~i~  148 (390)
T 3b8x_A           70 FFTKKPRLKKGDEIIVPAVSWSTTYYPLQQYGLRVKFVDIDINTLNIDIESLKEAVTDSTKAILTVN-LLGNPNNFDEIN  148 (390)
T ss_dssp             TSSSSCSCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBCTTTCSBCHHHHHHHCCTTEEEEEEEC-GGGCCCCHHHHH
T ss_pred             HhhhhcCCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEecCccccCcCHHHHHHHhCcCCeEEEEEC-CccChhhHHHHH
Confidence                   543                                0        0    0 257777753 567789999999


Q ss_pred             HHhhhcCCeEEEeccccccccc-----ee-----eee---cc-----CCchhhh---hHHHHHhhccCCC----------
Q psy10669        145 QICDETDSIMFADMSHISGLIA-----GV-----KGV---TK-----TGEKILY---DYEEKINNAVFPS----------  193 (337)
Q Consensus       145 eia~~~ga~l~vD~AH~~Gli~-----g~-----~~T---~~-----~Gg~i~~---~l~~~i~~~~~p~----------  193 (337)
                      ++|+++|+++++|++|+.|...     |.     +++   +|     .||+++.   ++.+.+++....+          
T Consensus       149 ~l~~~~~~~li~D~a~~~g~~~~~~~~g~~~~~~~~s~~~~k~~~~g~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~  228 (390)
T 3b8x_A          149 KIIGGRDIILLEDNCESMGATFNNKCAGTFGLMGTFSSFYSNHIATMEGGCIVTDDEEIYHILLCIRAHGWTRNLPKKNK  228 (390)
T ss_dssp             HHHTTSCCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCSSSCEEEEESCHHHHHHHHHHTBTTBSTTSCSEET
T ss_pred             HHHHHcCCEEEEECcCcccCEECCcccccccceEEEEccCCCCCccCCceEEEeCCHHHHHHHHHHHhcCCCcccccccc
Confidence            9999999999999999988654     11     221   12     3677764   3544443321111          


Q ss_pred             --------------------C-CCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCC--CC
Q psy10669        194 --------------------L-QGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGG--TD  249 (337)
Q Consensus       194 --------------------~-~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~--t~  249 (337)
                                          . +++++....++++. +.     ..++..++..+++++|.+.|.+. |+++....  +.
T Consensus       229 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~-l~-----~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~  302 (390)
T 3b8x_A          229 VTGVKSDDQFEESFKFVLPGYNVRPLEMSGAIGIEQ-LK-----KLPRFISVRRKNAEYFLDKFKDHPYLDVQQETGESS  302 (390)
T ss_dssp             TTEECCSCTTTSSSCBCSCCCBCCCCHHHHHHHHHH-HH-----HHHHHHHHHHHHHHHHHHHHTTCSSEEECCCCSBCC
T ss_pred             ccccccccccccccceeccccccCcCHHHHHHHHHH-HH-----HHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCcc
Confidence                                0 11334444443332 22     34578889999999999999885 88876421  22


Q ss_pred             CeEEEEEecCC-CcchHHHHHHHhhcCceecc
Q psy10669        250 VHLILIDLRKN-KLTGSKVELVLEEIAIACNK  280 (337)
Q Consensus       250 ~h~v~V~~~~~-~~~~~~~~~~L~~~gI~v~~  280 (337)
                      .+.++|.+... +.+..++.+.|.+.||.++.
T Consensus       303 ~~~~~i~~~~~~~~~~~~l~~~L~~~gI~v~~  334 (390)
T 3b8x_A          303 WFGFSFIIKKDSGVIRKQLVENLNSAGIECRP  334 (390)
T ss_dssp             CCEEEEEECTTSCCCHHHHHHHHHHTTBCCBC
T ss_pred             cEEEEEEecCcCcccHHHHHHHHHHCCCCeee
Confidence            34566666532 45788899999989999874

>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*

Probab=99.41  E-value=3.7e-12  Score=122.10  Aligned_cols=229  Identities=13%  Similarity=0.095  Sum_probs=146.2

Q ss_pred             cceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHH
Q psy10669         31 NGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANF  110 (337)
Q Consensus        31 ~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~  110 (337)
                      ..+++-..+..+++.+++++...+...        ++........+++    +.+++++|.++     .+.+.||+.|+.
T Consensus        23 ~~~~l~~~~p~~~~~~~~a~~~~~~~~--------~~~~~~~~~~~l~----~~la~~~~~~~-----~i~~~~gt~al~   85 (391)
T 3dr4_A           23 DLPRISVAAPRLDGNERDYVLECMDTT--------WISSVGRFIVEFE----KAFADYCGVKH-----AIACNNGTTALH   85 (391)
T ss_dssp             -----CCCCCCCCSSHHHHHHHHHHHT--------CCSSCSHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHH
T ss_pred             CCceeccCCCCCCHHHHHHHHHHHHcC--------CccCCChHHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHH
Confidence            445666677778999999998765432        1111223445555    68899999874     577888899998


Q ss_pred             HHHHhh-CCc----------------------------------------ccc-----cccEEEEcCcccccccChHHHH
Q psy10669        111 AVCEKA-LPT----------------------------------------NNA-----RFDFLSSGTTCYSRCLDYARFR  144 (337)
Q Consensus       111 ~v~~aL-l~~----------------------------------------~~a-----~pklII~~~S~~~~~~d~~~l~  144 (337)
                      .++.++ +++                                        .+.     ++++|++. ...+...|+++|.
T Consensus        86 ~~l~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~-n~tG~~~~~~~i~  164 (391)
T 3dr4_A           86 LALVAMGIGPGDEVIVPSLTYIASANSVTYCGATPVLVDNDPRTFNLDAAKLEALITPRTKAIMPV-HLYGQICDMDPIL  164 (391)
T ss_dssp             HHHHHHTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCGGGSGGGCCTTEEEECCB-CGGGCCCCHHHHH
T ss_pred             HHHHHcCCCCcCEEEECCCchHHHHHHHHHCCCEEEEEecCccccCcCHHHHHHhcCCCceEEEEE-CCCCChhhHHHHH
Confidence            888888 653                                        011     25777764 3567889999999


Q ss_pred             HHhhhcCCeEEEeccccccccc----------eeeee--c-c-----CCchhhh---hHHHHHhhccCCCCC--------
Q psy10669        145 QICDETDSIMFADMSHISGLIA----------GVKGV--T-K-----TGEKILY---DYEEKINNAVFPSLQ--------  195 (337)
Q Consensus       145 eia~~~ga~l~vD~AH~~Gli~----------g~~~T--~-~-----~Gg~i~~---~l~~~i~~~~~p~~~--------  195 (337)
                      ++|+++|+++++|++|+.|...          .++++  . |     .||+++.   ++.+.+......+..        
T Consensus       165 ~l~~~~~~~li~D~a~~~g~~~~~~~~~~~~di~~~S~s~~K~l~~g~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  244 (391)
T 3dr4_A          165 EVARRHNLLVIEDAAEAVGATYRGKKSGSLGDCATFSFFGNAIITTGEGGMITTNDDDLAAKMRLLRGQGMDPNRRYWFP  244 (391)
T ss_dssp             HHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECBTTSSSCCBSCEEEEESCHHHHHHHHHHHBTTCCTTSTTCCS
T ss_pred             HHHHHcCCEEEEECcccccceECCeeecccCCEEEEECCCCCcCCcCCeEEEEECCHHHHHHHHHHHhcCCCCCCccccc
Confidence            9999999999999999987753          11222  2 2     2566654   355544432111110        


Q ss_pred             --C-CCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecC------CCCCeEEEEEecC-CCcchH
Q psy10669        196 --G-GPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTG------GTDVHLILIDLRK-NKLTGS  265 (337)
Q Consensus       196 --g-~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~------~t~~h~v~V~~~~-~~~~~~  265 (337)
                        | +..   +.++.+++.......++++.++..++++++.+.|.+.|+++...      ....|++++.+.. .+.+..
T Consensus       245 ~~g~~~~---~~~l~aa~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  321 (391)
T 3dr4_A          245 IVGFNYR---MTNIQAAIGLAQLERVDEHLAARERVVGWYEQKLARLGNRVTKPHVALTGRHVFWMYTVRLGEGLSTTRD  321 (391)
T ss_dssp             SCCCBCB---CCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHGGGTTSEECCCCCTTSCCCCSSEEEEECSSCSSCHH
T ss_pred             ccccccC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccCcCCCCCCcceeEEEEEEECCccchhHH
Confidence              1 011   12222222222223557788999999999999999988887653      1233556776654 256788


Q ss_pred             HHHHHHhhcCceecc
Q psy10669        266 KVELVLEEIAIACNK  280 (337)
Q Consensus       266 ~~~~~L~~~gI~v~~  280 (337)
                      ++.+.|.+.||.+..
T Consensus       322 ~l~~~L~~~GI~v~~  336 (391)
T 3dr4_A          322 QVIKDLDALGIESRP  336 (391)
T ss_dssp             HHHHHHHHTTCCCEE
T ss_pred             HHHHHHHHCCCceee
Confidence            899999988998874

>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*

Probab=99.40  E-value=5.4e-11  Score=114.46  Aligned_cols=258  Identities=10%  Similarity=0.029  Sum_probs=161.1

Q ss_pred             HHHHHHHHHh-------h-cccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhc
Q psy10669         18 LYSLIKKEKH-------R-QINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAF   89 (337)
Q Consensus        18 ~~~~~~~e~~-------r-q~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lf   89 (337)
                      +..+..+|+.       + ....+++.++..-+||.|++++... .+    ...+. ...+. ...++...+++.+++++
T Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~-~~----~~~~~-~~~~~-~~~~~~~~~~~~la~~~   91 (398)
T 2fyf_A           19 KAGFMADQLTPHLEIPTAIKPRDGRFGSGPSKVRLEQLQTLTTT-AA----ALFGT-SHRQA-PVKNLVGRVRSGLAELF   91 (398)
T ss_dssp             -----------CCCCCGGGSCSSCBCCSSSCCCCHHHHHGGGTT-TT----TTTTS-CTTSH-HHHHHHHHHHHHHHHHT
T ss_pred             hhcchhhhcCcCcCCccccccCCccccCCCCCCCHHHHHHHhhc-CC----CccCc-CcCCH-HHHHHHHHHHHHHHHHh
Confidence            4455666665       2 4457888888888899999998652 11    11110 01111 22344455678999999


Q ss_pred             CCCCCCCcceeec-CCC-chhHHHHHHhhCCc----------------------------------------ccc-cccE
Q psy10669         90 NLDPEQWGCNVQP-YSG-SPANFAVCEKALPT----------------------------------------NNA-RFDF  126 (337)
Q Consensus        90 g~~~~~~~~~v~~-~Sg-t~AN~~v~~aLl~~----------------------------------------~~a-~pkl  126 (337)
                      |++.+   .+|.+ ++| +.|+..++.+++++                                        ++. +||+
T Consensus        92 g~~~~---~~i~~~t~g~t~al~~~~~~l~~~gv~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~g~~~~~~i~~~~~~  168 (398)
T 2fyf_A           92 SLPDG---YEVILGNGGATAFWDAAAFGLIDKRSLHLTYGEFSAKFASAVSKNPFVGEPIIITSDPGSAPEPQTDPSVDV  168 (398)
T ss_dssp             TCCTT---CEEEEEETCHHHHHHHHHHHTCSSCEEEEECSHHHHHHHHHHHHCTTSCCCEEEECCTTCCCCCCCCTTCSE
T ss_pred             CCCCC---ceEEEeCCchhHHHHHHHHHhcCCCeEEEeCCHHHHHHHHHHHHhCCCCceEEEecCCCCCCCccccCCCCE
Confidence            99742   25666 555 88988888888654                                        000 2677


Q ss_pred             EEEcCc--ccccccChHHHHHHhhhcCCeEEEeccccccccc-------eeeeeccC-----C--chhhh--hHHHHHhh
Q psy10669        127 LSSGTT--CYSRCLDYARFRQICDETDSIMFADMSHISGLIA-------GVKGVTKT-----G--EKILY--DYEEKINN  188 (337)
Q Consensus       127 II~~~S--~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-------g~~~T~~~-----G--g~i~~--~l~~~i~~  188 (337)
                      |++...  ..+...|+++|.++   +|+++++|++|..|...       .++++.+|     |  |+++.  ++.+.++.
T Consensus       169 v~~~~~~nptG~~~~~~~i~~~---~~~~vivD~a~~~~~~~~~~~~~di~~~s~sK~~~~~gg~g~l~~~~~~~~~l~~  245 (398)
T 2fyf_A          169 IAWAHNETSTGVAVAVRRPEGS---DDALVVIDATSGAGGLPVDIAETDAYYFAPQKNFASDGGLWLAIMSPAALSRIEA  245 (398)
T ss_dssp             EEEESEETTTTEECCCCCCTTC---C-CEEEEECTTTTTTSCCCGGGCSEEEECTTSTTCSCSSEEEEEECHHHHHHHHH
T ss_pred             EEEeCcCCCcceecchHHhhhh---cCCeEEEEeccccCCcccCcccCcEEEEecCcccCCCCceEEEEECHHHHHHhhc
Confidence            776532  24677888777776   89999999999987654       23344322     3  33332  45444421


Q ss_pred             c----------c----------CCCCCCCCcHHHHHHHHHHHHHHhchh-hHHHHHHHHHHHHHHHHHHHhC-CCEEec-
Q psy10669        189 A----------V----------FPSLQGGPHNHAIGAIATAMLQAQSDE-FKSYQAQVKANASHLSDEMIKR-GYHVVT-  245 (337)
Q Consensus       189 ~----------~----------~p~~~g~~~~~~iaala~a~~e~~~~~-~~~y~~~v~~na~~l~~~L~~~-G~~v~~-  245 (337)
                      .          .          .....++++.+.++++..++..+.+.. .++.+++..++.++|.+.|.+. |+++.. 
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~  325 (398)
T 2fyf_A          246 IAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQERPYTTPFVT  325 (398)
T ss_dssp             HHHTTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHSTTEEESCC
T ss_pred             ccccCCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHcCCceeccC
Confidence            0          0          012356888899999999988775433 6788999999999999999997 898873 


Q ss_pred             CC-CC-CeEEEEEecCCCcchHHHHHHHhhcCceeccC------cccchhhh
Q psy10669        246 GG-TD-VHLILIDLRKNKLTGSKVELVLEEIAIACNKN------TGISLAAE  289 (337)
Q Consensus       246 ~~-t~-~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~------~girig~~  289 (337)
                      +. .. ++++++.+.. +.+..++.+.|.+.||.+.+.      ..|||+..
T Consensus       326 ~~~~~~~~~~~~~~~~-~~~~~~l~~~L~~~gI~v~~g~~~~~~~~iRis~~  376 (398)
T 2fyf_A          326 DPGLRSQVVGTIDFVD-DVDAGTVAKILRANGIVDTEPYRKLGRNQLRVAMF  376 (398)
T ss_dssp             SGGGBCSSEEEEEECT-TSCHHHHHHHHHHTTCBCCSCCTTTCSSEEEEECC
T ss_pred             ChhhcCCcEEEEECCC-CCCHHHHHHHHHHCCcEEecCcccCCCCEEEEEec
Confidence            11 12 3477887754 567888888888889998642      14777643

>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}

Probab=99.40  E-value=3.6e-11  Score=112.24  Aligned_cols=239  Identities=13%  Similarity=0.155  Sum_probs=152.4

Q ss_pred             HHHHHHHHhhcccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCC
Q psy10669         19 YSLIKKEKHRQINGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQW   96 (337)
Q Consensus        19 ~~~~~~e~~rq~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~   96 (337)
                      .+...++....++.|.|-..||+.  +|.|++++...+.. + .++|       .....+++    +.+++++|++.   
T Consensus         5 ~~~~~~~~~~~~~~i~l~~n~~~~~~~~~v~~a~~~~~~~-~-~~y~-------~~~~~~lr----~~la~~~~~~~---   68 (337)
T 3p1t_A            5 GEAMDTEVRAAAQAVCLAFNENPEAVEPRVQAAIAAAAAR-I-NRYP-------FDAEPRVM----RKLAEHFSCPE---   68 (337)
T ss_dssp             ---------CCCCCEECSSCCCCSCCCHHHHHHHHHHGGG-T-TSCC-------TTHHHHHH----HHHHHHHTSCG---
T ss_pred             hhhccccccCCCCceEeeCCCCCCCCCHHHHHHHHHhhhh-h-ccCC-------CCchHHHH----HHHHHHhCcCH---
Confidence            334445556667788888888986  89999999865432 1 1221       12234444    68889999876   


Q ss_pred             cceeecCCCc-hhHHHHHHhhCCc----------------------------------------ccc-cccEEEEcCcc-
Q psy10669         97 GCNVQPYSGS-PANFAVCEKALPT----------------------------------------NNA-RFDFLSSGTTC-  133 (337)
Q Consensus        97 ~~~v~~~Sgt-~AN~~v~~aLl~~----------------------------------------~~a-~pklII~~~S~-  133 (337)
                       .+|.+++|+ +++..++.++ +.                                        +.+ ++++|++.... 
T Consensus        69 -~~i~~t~G~~~~l~~~~~~~-~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~v~i~~p~n  146 (337)
T 3p1t_A           69 -DNLMLVRGIDECFDRISAEF-SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTDDLLLDPNDLAQVSRDDCVVLANPSN  146 (337)
T ss_dssp             -GGEEEESHHHHHHHHHHHHS-TTSEEEEESSSCSHHHHHHTTSCCEEEEECBCTTSSBCHHHHTTCCTTEEEEEESSCT
T ss_pred             -HHEEEeCCHHHHHHHHHHhc-CCCeEEEeCCCcHHHHHHHHHcCCEEEEecCCCCCCCCHHHHHhhcCCCEEEEeCCCC
Confidence             368888885 5666666666 31                                        111 25777665333 


Q ss_pred             -cccccChHHHHHHhhhcCCeEEEeccccc--cc--c--c-----eeeeec-c----CC---chhhh--hHHHHHhhccC
Q psy10669        134 -YSRCLDYARFRQICDETDSIMFADMSHIS--GL--I--A-----GVKGVT-K----TG---EKILY--DYEEKINNAVF  191 (337)
Q Consensus       134 -~~~~~d~~~l~eia~~~ga~l~vD~AH~~--Gl--i--~-----g~~~T~-~----~G---g~i~~--~l~~~i~~~~~  191 (337)
                       .+...|.+++.+||++++. +++|++|..  +.  .  .     .+.+|. |    .|   |+++.  ++.+.+.....
T Consensus       147 ptG~~~~~~~l~~l~~~~~~-~ivDea~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~  225 (337)
T 3p1t_A          147 PTGQALSAGELDQLRQRAGK-LLIDETYVDYSSFRARGLAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRKQW  225 (337)
T ss_dssp             TTCCCCCHHHHHHHHHHCSE-EEEECTTGGGSSCSSSCCCCBTTEEEEEESSSTTCCTTTCCEEEECCHHHHHHHHTTSC
T ss_pred             CCCCCCCHHHHHHHHHhCCc-EEEECCChhhccccccccccCCCEEEEeeCchhccCcchheEEEEeCHHHHHHHHhhcC
Confidence             4689999999999999986 677999972  11  0  0     123333 2    12   66654  56676765433


Q ss_pred             CCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHH
Q psy10669        192 PSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVL  271 (337)
Q Consensus       192 p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L  271 (337)
                         ..+++++..+++..++...  ..+.+.++++.++.++|.+.|.+.|+++..  .+...+++...    ++..+.+.|
T Consensus       226 ---~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~--~~~~~~~~~~~----~~~~~~~~l  294 (337)
T 3p1t_A          226 ---FCNVGTLDLHALEAALDND--RAREAHIAKTLAQRRRVADALRGLGYRVAS--SEANFVLVENA----AGERTLRFL  294 (337)
T ss_dssp             ---TTCSCHHHHHHHHHHHTCH--HHHHHHHHHHHHHHHHHHHHHHHTTCCBCC--CSSSEEEEECT----TTHHHHHHH
T ss_pred             ---CCCCCHHHHHHHHHHhCCH--HHHHHHHHHHHHHHHHHHHHHHHCcCEECC--CCCeEEEEEcC----CHHHHHHHH
Confidence               3466777777766665432  245677888899999999999999998865  44455555543    356778889


Q ss_pred             hhcCceeccCc------ccchh
Q psy10669        272 EEIAIACNKNT------GISLA  287 (337)
Q Consensus       272 ~~~gI~v~~~~------girig  287 (337)
                      .+.||.+.+..      .+||+
T Consensus       295 ~~~gi~v~~g~~~~~~~~iRis  316 (337)
T 3p1t_A          295 RERGIQVKDAGQFGLHHHIRIS  316 (337)
T ss_dssp             HHTTEECEEGGGGTCCSEEEEE
T ss_pred             HHCCeEEEECccCCCCCeEEEe
Confidence            98999998643      46665

>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}

Probab=99.39  E-value=1.2e-11  Score=120.87  Aligned_cols=239  Identities=14%  Similarity=0.114  Sum_probs=145.0

Q ss_pred             cccceeeeccCCC--CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhc----CCCCCCCcceeec
Q psy10669         29 QINGIELIASENF--TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAF----NLDPEQWGCNVQP  102 (337)
Q Consensus        29 q~~~i~l~asen~--~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lf----g~~~~~~~~~v~~  102 (337)
                      .+..|+|...++-  .+|.|.+++...+.. +.. ..+...|....-..+++    +.+++++    +.+.    .+|.+
T Consensus        68 ~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~-~~~-~~~~~~y~~~~g~~~lr----~~ia~~~~~g~~~~~----~~i~~  137 (449)
T 3qgu_A           68 DAKIISLGIGDTTEPLPKYIADAMAKAAAG-LAT-REGYSGYGAEQGQGALR----EAVASTFYGHAGRAA----DEIFI  137 (449)
T ss_dssp             TCCCEECSSCCCCCCCCHHHHHHHHHHHHG-GGG-SCCCCCSTTTTCCHHHH----HHHHHHHHTTTTCCG----GGEEE
T ss_pred             CCCEEEeeCCCCCCCCCHHHHHHHHHHHHh-hcc-ccCCCCCCCCCCcHHHH----HHHHHHHHcCCCCCH----HHEEE
Confidence            3346777666553  489999999876543 221 12222333222234554    4556666    4444    36888


Q ss_pred             CCCchhHHHHHHhhCCc-----------------------c----------c------------------ccccEEEEcC
Q psy10669        103 YSGSPANFAVCEKALPT-----------------------N----------N------------------ARFDFLSSGT  131 (337)
Q Consensus       103 ~Sgt~AN~~v~~aLl~~-----------------------~----------~------------------a~pklII~~~  131 (337)
                      ++|+..++..+.+++++                       +          .                  .++++|++..
T Consensus       138 t~G~~~al~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~  217 (449)
T 3qgu_A          138 SDGSKCDIARIQMMFGSKPTVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKAKRTDIIFFCS  217 (449)
T ss_dssp             ESCHHHHHHHHHHHHCSSSCEEEEESCCTHHHHHHHHHTCSCCBCSSSBTTEEEEECCGGGTTCCCGGGCCCCSEEEEES
T ss_pred             ccCHHHHHHHHHHHhCCCCEEEEcCCCChhHHHHHHHcCCcccccccccceeEEEecccccCCcCChhHcCCCCEEEEeC
Confidence            88865444334777543                       2          1                  0257777742


Q ss_pred             ccc--ccccC---hHHHHHHhhhcCCeEEEeccccccccce-----------------eeeec-c----CC---chhhh-
Q psy10669        132 TCY--SRCLD---YARFRQICDETDSIMFADMSHISGLIAG-----------------VKGVT-K----TG---EKILY-  180 (337)
Q Consensus       132 S~~--~~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~g-----------------~~~T~-~----~G---g~i~~-  180 (337)
                      -.+  +...+   +++|.++|+++|++|++|++|..+...+                 +++|. |    .|   |+++. 
T Consensus       218 p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~  297 (449)
T 3qgu_A          218 PNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGVRLGWTVVP  297 (449)
T ss_dssp             SCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTCTTCCCEEEECC
T ss_pred             CCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcCCccceeEEEecC
Confidence            222  23443   6677788999999999999998733321                 12333 2    23   66654 


Q ss_pred             -hHHH--------HHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCe
Q psy10669        181 -DYEE--------KINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVH  251 (337)
Q Consensus       181 -~l~~--------~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h  251 (337)
                       ++.+        .+.... ...+++++++..++...++........++.++++.++.++|.+.|.+.|+++..+ ..+.
T Consensus       298 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~  375 (449)
T 3qgu_A          298 KALKYANGEPVHADWNRVM-TTCFNGASNIVQAGGLACLQPEGLKEMNAMIKFYKENAQILKTTFTEMGFSVYGG-DDAP  375 (449)
T ss_dssp             TTCBCTTSCBHHHHHHHHH-HHSCCCCCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEES-SSSS
T ss_pred             HHHHhhhhhhHHHHHHHHh-hcccCCCCHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHCCCeeeCC-CCee
Confidence             2221        232221 1224466777777766666542223457889999999999999999999998752 3467


Q ss_pred             EEEEEecCCCcchHHHHHHH-hhcCceeccC
Q psy10669        252 LILIDLRKNKLTGSKVELVL-EEIAIACNKN  281 (337)
Q Consensus       252 ~v~V~~~~~~~~~~~~~~~L-~~~gI~v~~~  281 (337)
                      .+++++.  +.+..++.+.| +++||.+.+.
T Consensus       376 ~~~~~~~--~~~~~~~~~~l~~~~gI~v~pg  404 (449)
T 3qgu_A          376 YIWVGFP--GKPSWDVFAEILERCNIVTTPG  404 (449)
T ss_dssp             EEEEECT--TSCHHHHHHHHHHHHCEECEEG
T ss_pred             EEEEECC--CCCHHHHHHHHHHHCCEEEecc
Confidence            8888887  55677766555 4579998763

>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}

Probab=99.38  E-value=6e-11  Score=112.28  Aligned_cols=233  Identities=13%  Similarity=0.107  Sum_probs=160.9

Q ss_pred             ccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-c
Q psy10669         30 INGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-S  106 (337)
Q Consensus        30 ~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t  106 (337)
                      +..|.|...+|..  +|.|++++...+..  ..+++...      . .++    ++.+++++|.+.    .+|.+++| +
T Consensus        30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~--~~~y~~~~------~-~~l----r~~la~~~~~~~----~~v~~~~g~~   92 (365)
T 3get_A           30 KEVIKLASNENPFGTPPKAIECLRQNANK--AHLYPDDS------M-IEL----KSTLAQKYKVQN----ENIIIGAGSD   92 (365)
T ss_dssp             SCCEECSSCCCTTCSCHHHHHHHHHHGGG--TTSCCCTT------C-HHH----HHHHHHHHTCCG----GGEEEESSHH
T ss_pred             CceEEecCCCCCCCCCHHHHHHHHHHHHh--hccCCCCC------h-HHH----HHHHHHHhCCCc----ceEEECCCHH
Confidence            4678888888875  89999999876542  12333221      1 244    467889999865    25777666 6


Q ss_pred             hhHHHHHHhhCCc----------------------------cc----------------ccccEEEEc-Ccc-cccccCh
Q psy10669        107 PANFAVCEKALPT----------------------------NN----------------ARFDFLSSG-TTC-YSRCLDY  140 (337)
Q Consensus       107 ~AN~~v~~aLl~~----------------------------~~----------------a~pklII~~-~S~-~~~~~d~  140 (337)
                      +|+..++.+++++                            ..                .++++|++. +++ .+...|.
T Consensus        93 ~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~  172 (365)
T 3get_A           93 QVIEFAIHSKLNSKNAFLQAGVTFAMYEIYAKQCGAKCYKTQSITHNLDEFKKLYETHKDEIKLIFLCLPNNPLGECLDA  172 (365)
T ss_dssp             HHHHHHHHHHCCTTCEEEECSSCCTHHHHHHHHHTCEEEECSSSSCCHHHHHHHHHHTTTTEEEEEEESSCTTTCCCCCH
T ss_pred             HHHHHHHHHHhCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecCCCCCCCHHHHHHHhCCCCCEEEEcCCCCCCCCCcCH
Confidence            7888888888754                            11                026777775 333 4688898


Q ss_pred             HHHHHHhh--hcCCeEEEecccccccc---c----------------eeeeec-c----CC---chhhh--hHHHHHhhc
Q psy10669        141 ARFRQICD--ETDSIMFADMSHISGLI---A----------------GVKGVT-K----TG---EKILY--DYEEKINNA  189 (337)
Q Consensus       141 ~~l~eia~--~~ga~l~vD~AH~~Gli---~----------------g~~~T~-~----~G---g~i~~--~l~~~i~~~  189 (337)
                      +++.+|++  ++|+++++|++|..+..   +                .+++|. |    .|   |+++.  ++.+.+...
T Consensus       173 ~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~  252 (365)
T 3get_A          173 SEATEFIKGVNEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIANANIISAFYKL  252 (365)
T ss_dssp             HHHHHHHHTSCTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEEECHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEEEEcCHHHHHHHHHh
Confidence            98888887  66999999999984441   1                122333 2    12   56554  577777665


Q ss_pred             cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHH
Q psy10669        190 VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVEL  269 (337)
Q Consensus       190 ~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~  269 (337)
                      ..+   .+++++..+++..++...  ...++.++++.++.++|.+.|.+.|+++..  .+...+++++...  +..++.+
T Consensus       253 ~~~---~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~--~~~~~~~~~~~~~--~~~~~~~  323 (365)
T 3get_A          253 RAP---FNVSNLALKAAVAAMDDD--EFTEKTLENNFSQMELYKEFAKKHNIKIID--SYTNFITYFFDEK--NSTDLSE  323 (365)
T ss_dssp             SCT---TCSCHHHHHHHHHHHTCH--HHHHHHHHHHHHHHHHHHHHHHHTTCEECC--CSSSEEEEECSSS--CHHHHHH
T ss_pred             cCC---CCcCHHHHHHHHHHhCCH--HHHHHHHHHHHHHHHHHHHHHHhCCCEECC--CCCeEEEEECCCC--CHHHHHH
Confidence            443   247777877777776542  345788999999999999999999998865  4455577887653  6788888


Q ss_pred             HHhhcCceeccCc-----ccchhh
Q psy10669        270 VLEEIAIACNKNT-----GISLAA  288 (337)
Q Consensus       270 ~L~~~gI~v~~~~-----girig~  288 (337)
                      .|.+.||.+.+..     .+||+.
T Consensus       324 ~l~~~gi~v~~g~~~~~~~iRis~  347 (365)
T 3get_A          324 KLLKKGIIIRNLKSYGLNAIRITI  347 (365)
T ss_dssp             HHHTTTEECEECGGGTCSEEEEEC
T ss_pred             HHHHCCEEEEECccCCCCEEEEEc
Confidence            8988899987642     467763

>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}

Probab=99.38  E-value=1.6e-12  Score=122.85  Aligned_cols=227  Identities=13%  Similarity=0.066  Sum_probs=136.7

Q ss_pred             eeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHH
Q psy10669         35 LIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCE  114 (337)
Q Consensus        35 l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~  114 (337)
                      |..+.+-..+.+++++.    .+++ +..++..|+......++|    +++++++|.+.     .+.++||+.||..++.
T Consensus        15 l~~~~~p~~~~~~~~~~----~~~~-~~~~~~~y~~~~~~~~l~----~~la~~~~~~~-----~i~~~~G~~a~~~al~   80 (357)
T 3lws_A           15 QISGHGKRNVGVLKTAF----AAVA-DEMASDQYGTGAIIEPFE----QKFADVLGMDD-----AVFFPSGTMAQQVALR   80 (357)
T ss_dssp             ESSBSSCCBHHHHHHHH----TTSC-TTCBCEETTEETTHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHH
T ss_pred             cccCCCCCCHHHHHHHH----HHhh-cccCcccccCChHHHHHH----HHHHHHhCCCc-----EEEecCcHHHHHHHHH
Confidence            44455544555555443    2332 233445565556667777    57789999864     5777899999888777


Q ss_pred             hhCCc-------------------------------------------cc---ccccEEEEcCccc---cccc---ChHH
Q psy10669        115 KALPT-------------------------------------------NN---ARFDFLSSGTTCY---SRCL---DYAR  142 (337)
Q Consensus       115 aLl~~-------------------------------------------~~---a~pklII~~~S~~---~~~~---d~~~  142 (337)
                      +++.+                                           .+   .++++|++.....   +...   ++++
T Consensus        81 ~~~~~gd~~~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~~~~~~v~~~~p~np~~G~~~~~~~l~~  160 (357)
T 3lws_A           81 IWSDETDNRTVAYHPLCHLEIHEQDGLKELHPIETILVGAADRLMTLDEIKALPDIACLLLELPQREIGGVAPAFSELET  160 (357)
T ss_dssp             HHHHHHTCCEEEECTTCHHHHSSTTHHHHHSSCEEEECSCTTSCCCHHHHHTCCSCSEEEEESSBGGGTSBCCCHHHHHH
T ss_pred             HHhhcCCCcEEEecccceeeeeccchhhhccCcEEEEecCCCCCcCHHHHhcCcCcceEEEEcccccCCceeCCHHHHHH
Confidence            76421                                           00   0157777653332   4444   4777


Q ss_pred             HHHHhhhcCCeEEEecccccccc---c-----------eeeeec------cCCchhhh--hHHHHHhhcc--CCCCCCCC
Q psy10669        143 FRQICDETDSIMFADMSHISGLI---A-----------GVKGVT------KTGEKILY--DYEEKINNAV--FPSLQGGP  198 (337)
Q Consensus       143 l~eia~~~ga~l~vD~AH~~Gli---~-----------g~~~T~------~~Gg~i~~--~l~~~i~~~~--~p~~~g~~  198 (337)
                      |.++|+++|++|++|+||..+..   +           .++.|.      +.||+++.  ++.+.+....  +.+...+.
T Consensus       161 i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (357)
T 3lws_A          161 ISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIAGLFDSIYISFYKGLGGIAGAILAGPAAFCQTARIWKRRYGGDLISL  240 (357)
T ss_dssp             HHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHHTTSSEEEEESSSTTCCSSCEEEEECHHHHHHHHHHHHHTTCCCSCC
T ss_pred             HHHHHHHcCCEEEEECchhhhhhhhcCCChHHHHhcCCEEEEeccccCCCCceEEEEcCHHHHHHHHHHHHHhcCCcccc
Confidence            88999999999999999972211   1           133333      24677665  4555544221  21111112


Q ss_pred             cHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCCC-cchHHHHHHHhhcCc
Q psy10669        199 HNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKNK-LTGSKVELVLEEIAI  276 (337)
Q Consensus       199 ~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~~-~~~~~~~~~L~~~gI  276 (337)
                      +....++ ..++.+.     .+..++..++.+++.+.|.+. |+++......+..+++++...+ .+..++.+.|.+.||
T Consensus       241 ~~~~~~~-~~~l~~~-----~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi  314 (357)
T 3lws_A          241 YPYIVSA-DYYYELR-----KDRMGQYYEQAKQLAEQFNALPGVHTTPEVPVSNMFHLHFDGQAADISPKLEQVQEETGL  314 (357)
T ss_dssp             HHHHHHH-HHHHHHH-----TTCHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEEESCHHHHHHHHHHHHHHHCE
T ss_pred             hHHHHHH-HHHHHHH-----HHHHHHHHHHHHHHHHHHHhCCCCeeccCCCcceEEEEEecCChHHHHHHHHHHHHhcCe
Confidence            2222222 2333332     233455678899999999985 9988533467788899987642 135677888888999


Q ss_pred             eeccC
Q psy10669        277 ACNKN  281 (337)
Q Consensus       277 ~v~~~  281 (337)
                      .+.+-
T Consensus       315 ~v~~g  319 (357)
T 3lws_A          315 GFVGY  319 (357)
T ss_dssp             ESCSC
T ss_pred             EEecc
Confidence            99864

>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}

Probab=99.38  E-value=6.4e-12  Score=118.60  Aligned_cols=234  Identities=11%  Similarity=0.042  Sum_probs=149.6

Q ss_pred             HHhhcccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeec
Q psy10669         25 EKHRQINGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQP  102 (337)
Q Consensus        25 e~~rq~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~  102 (337)
                      +..++...+.+.+++|..  +|.|.+++...+.         ...|.......+++    +++++++|.+.     .+.+
T Consensus         8 ~~~~~~~~~~~~~~~~~~g~~p~v~~ai~~~~~---------~~~~~~~~~~~~l~----~~la~~~~~~~-----~i~~   69 (359)
T 3pj0_A            8 TSYQKTPYKLGGNGPRNVGVLTEALQNIDDNLE---------SDIYGNGAVIEDFE----TKIAKILGKQS-----AVFF   69 (359)
T ss_dssp             HHHHTCSEESSSSSCCBHHHHHHHTTTSCTTCB---------CCBTTBSHHHHHHH----HHHHHHHTCSE-----EEEE
T ss_pred             HHHHhcchhhcCCCccccCCCHHHHHHHHhhcc---------cCcccCCHHHHHHH----HHHHHHhCCCc-----EEEe
Confidence            445778889999999999  9999998875321         11232233445565    57889999875     5777


Q ss_pred             CCCchhHHHHHHhhCCc---------------------------------------------ccc--cccEEEEcCcc-c
Q psy10669        103 YSGSPANFAVCEKALPT---------------------------------------------NNA--RFDFLSSGTTC-Y  134 (337)
Q Consensus       103 ~Sgt~AN~~v~~aLl~~---------------------------------------------~~a--~pklII~~~S~-~  134 (337)
                      +||+.||..++.+++.+                                             +.+  ++++|++.... .
T Consensus        70 ~~g~~a~~~a~~~~~~~g~~~vvi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~~~~~~~v~~~~p~n~  149 (359)
T 3pj0_A           70 PSGTMAQQIALRIWADRKENRRVAYHPLSHLEIHEQDGLKELQQITPLLLGTANQLLTIDDIKSLREPVSSVLIELPQRE  149 (359)
T ss_dssp             SCHHHHHHHHHHHHHHHHTCCEEEECTTCHHHHSSTTHHHHHHCCEEEECSCTTSCCCHHHHHTCSSCCSEEEEESSBGG
T ss_pred             CCHHHHHHHHHHHHHhcCCCcEEEEeccceeeehhcchHHHhcCceEEecCCcCCCcCHHHHHhccCCceEEEEEecccC
Confidence            88899988887776321                                             111  26888875332 2


Q ss_pred             --ccccChHHH---HHHhhhcCCeEEEeccccccccc--------------eeeeec-c-----CCchhhh--hHHHHHh
Q psy10669        135 --SRCLDYARF---RQICDETDSIMFADMSHISGLIA--------------GVKGVT-K-----TGEKILY--DYEEKIN  187 (337)
Q Consensus       135 --~~~~d~~~l---~eia~~~ga~l~vD~AH~~Gli~--------------g~~~T~-~-----~Gg~i~~--~l~~~i~  187 (337)
                        +...|.+++   .++|+++|++|++|++|..+...              .++.+. |     .||+++.  ++.+.+.
T Consensus       150 ~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~gg~~~~~~~l~~~~~  229 (359)
T 3pj0_A          150 IGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEEICALFDSVYVSFYKGIGGIAGAILAGNDDFVQEAK  229 (359)
T ss_dssp             GTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHHTTCSEEEEESSSTTCCSSCEEEEECHHHHHHHH
T ss_pred             CCcccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCHHHhhccCCEEEEeccccCCCcceEEEECCHHHHHHHH
Confidence              456666665   78999999999999998765421              122233 2     2455554  4666554


Q ss_pred             hc--cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCCC-cc
Q psy10669        188 NA--VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKNK-LT  263 (337)
Q Consensus       188 ~~--~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~~-~~  263 (337)
                      ..  .+.+...+.+....+++ .++.+.     .+..++..++.+++++.|.+. |+++....+.++.+++++...+ .+
T Consensus       230 ~~~~~~~~~~~~~~~~~~a~~-~~l~~~-----~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  303 (359)
T 3pj0_A          230 IWKRRYGGDLISLYPYILSAD-YYFEKR-----IGKMAEYFEAAKGLAERFNSCSGVKTVPEVPVSNMFHVYFENSADEI  303 (359)
T ss_dssp             HHHHHTTCCCSCCHHHHHHHH-HHHHHH-----GGGHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEESSCHHHH
T ss_pred             HHHHHhCCCcchhHHHHHHHH-HHHHHH-----HHHhHHHHHHHHHHHHHHhhCCCceeeccCCcceEEEEEecCccchh
Confidence            31  12221212222222222 333332     244556788999999999995 9988533467788888886532 24


Q ss_pred             hHHHHHHHhhcCceeccCc
Q psy10669        264 GSKVELVLEEIAIACNKNT  282 (337)
Q Consensus       264 ~~~~~~~L~~~gI~v~~~~  282 (337)
                      ..++.+.|.+.||.+.+..
T Consensus       304 ~~~l~~~l~~~GV~v~~g~  322 (359)
T 3pj0_A          304 GAILTKIQDETGVGISGYL  322 (359)
T ss_dssp             HHHHHHHHHHHCEECCSCC
T ss_pred             HHHHHHHHHhcCcEecCCc
Confidence            5678888888999998743

>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0

Probab=99.37  E-value=5.9e-11  Score=112.43  Aligned_cols=232  Identities=12%  Similarity=0.063  Sum_probs=154.1

Q ss_pred             ccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCC-CCCCCcceeecCCC-
Q psy10669         30 INGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNL-DPEQWGCNVQPYSG-  105 (337)
Q Consensus        30 ~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~-~~~~~~~~v~~~Sg-  105 (337)
                      ++.|.|...+|..  +|.|++++...+.+....+++.       ....+++    +.+++++|. +.    .++.+++| 
T Consensus        30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-------~~~~~l~----~~la~~~g~~~~----~~i~~~~g~   94 (367)
T 3euc_A           30 HGLVKLDAMENPYRLPPALRSELAARLGEVALNRYPV-------PSSEALR----AKLKEVMQVPAG----MEVLLGNGS   94 (367)
T ss_dssp             TTCEECCSSCCCCCCCHHHHHHHHHHHHHHHTTCSCC-------CCHHHHH----HHHHHHHTCCTT----CEEEEEEHH
T ss_pred             CCeeEccCCCCCCCCCHHHHHHHHHHhhhhhhhcCCC-------CcHHHHH----HHHHHHhCCCCc----ceEEEcCCH
Confidence            4568888888875  8999999987655321122222       1234444    678899998 43    25777776 


Q ss_pred             chhHHHHHHhhCCc-----------------------------------------cc---c-cccEEEEcCcc--ccccc
Q psy10669        106 SPANFAVCEKALPT-----------------------------------------NN---A-RFDFLSSGTTC--YSRCL  138 (337)
Q Consensus       106 t~AN~~v~~aLl~~-----------------------------------------~~---a-~pklII~~~S~--~~~~~  138 (337)
                      +.|+..++.+++++                                         +.   . ++++|++..-.  .+...
T Consensus        95 t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~  174 (367)
T 3euc_A           95 DEIISMLALAAARPGAKVMAPVPGFVMYAMSAQFAGLEFVGVPLRADFTLDRGAMLAAMAEHQPAIVYLAYPNNPTGNLF  174 (367)
T ss_dssp             HHHHHHHHHHTCCTTCEEEEEESCSCCSCHHHHTTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEEEESSCTTTCCCC
T ss_pred             HHHHHHHHHHHcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEecCCCCCCCCHHHHHHHhhccCCCEEEEcCCCCCCCCCC
Confidence            67888888888654                                         00   1 36888775323  24554


Q ss_pred             ---ChHHHHHHhhhc--CCeEEEecccccc----ccc--------eeeeeccC----C---chhhh--hHHHHHhhccCC
Q psy10669        139 ---DYARFRQICDET--DSIMFADMSHISG----LIA--------GVKGVTKT----G---EKILY--DYEEKINNAVFP  192 (337)
Q Consensus       139 ---d~~~l~eia~~~--ga~l~vD~AH~~G----li~--------g~~~T~~~----G---g~i~~--~l~~~i~~~~~p  192 (337)
                         ++++|.++|+++  |+++++|++|...    ...        .++++..|    |   |+++.  ++.+.+.....+
T Consensus       175 ~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~~~~~~~~~~~~~  254 (367)
T 3euc_A          175 DAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQESWMSRLTDFGNLLVMRTVSKLGLAGIRLGYVAGDPQWLEQLDKVRPP  254 (367)
T ss_dssp             CHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCCSGGGGGTCTTEEEEEECCCTTSCSCCEEEEEECHHHHHHHGGGCCS
T ss_pred             CHHHHHHHHHhhhhcCCCcEEEEeCcchhhcccchHHHHhhCCCEEEEecchhhcccccCceeeeeCHHHHHHHHHhCCC
Confidence               455666779999  9999999999742    111        12233322    2   55554  577777665443


Q ss_pred             CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCCCcchHHHHHHH
Q psy10669        193 SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKNKLTGSKVELVL  271 (337)
Q Consensus       193 ~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L  271 (337)
                         .++++...+++..++..  ....++.++++.++.++|.+.|.+. |+++..  .....+++.+.    +..++.+.|
T Consensus       255 ---~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~--~~~~~~~~~~~----~~~~l~~~l  323 (367)
T 3euc_A          255 ---YNVNVLTEATALFALEH--VAVLDEQAAQLRAERSRVAEGMAAHGGVTVFP--SAANFLLARVP----DAAQTFDRL  323 (367)
T ss_dssp             ---SCCCHHHHHHHHHHHTT--HHHHHHHHHHHHHHHHHHHHHHHTSTTCEECC--CSSSEEEEECS----CHHHHHHHH
T ss_pred             ---CCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHhCCCcEECC--CCCeEEEEECC----CHHHHHHHH
Confidence               25677777777777655  2345788899999999999999986 998754  44556677775    577888889


Q ss_pred             hhcCceeccCc--------ccchh
Q psy10669        272 EEIAIACNKNT--------GISLA  287 (337)
Q Consensus       272 ~~~gI~v~~~~--------girig  287 (337)
                      .+.||.+....        .|||+
T Consensus       324 ~~~gi~v~~~~~~~~~~~~~iRis  347 (367)
T 3euc_A          324 LARKVLIKNVSKMHPLLANCLRVT  347 (367)
T ss_dssp             HTTTEECEECGGGCGGGTTEEEEE
T ss_pred             HHCCeEEEECCccCCCCCCEEEEe
Confidence            88999987533        46776

>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*

Probab=99.36  E-value=2.1e-11  Score=115.48  Aligned_cols=220  Identities=13%  Similarity=0.058  Sum_probs=141.2

Q ss_pred             cCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhh-
Q psy10669         38 SENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKA-  116 (337)
Q Consensus        38 sen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aL-  116 (337)
                      +...++|.|++++...+.+.+  .++       .....+++    +.+++++|.+.     .+..+||+.|+..++.++ 
T Consensus         7 ~~~~~~~~v~~a~~~~~~~~~--~~~-------~~~~~~l~----~~la~~~~~~~-----v~~~~ggt~al~~~~~~~~   68 (375)
T 2fnu_A            7 SEPCLDKEDKKAVLEVLNSKQ--LTQ-------GKRSLLFE----EALCEFLGVKH-----ALVFNSATSALLTLYRNFS   68 (375)
T ss_dssp             CCCCCCHHHHHHHHHHHTSSC--CSS-------SHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHHHSS
T ss_pred             CCCCCCHHHHHHHHHHHHcCc--ccC-------ChHHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHHHhc
Confidence            456789999999987654321  112       12234444    68899999873     355566689998888998 


Q ss_pred             --CCc---------------------------------------cc--c---cccEEEEcCcccccccChHHHHHHhhhc
Q psy10669        117 --LPT---------------------------------------NN--A---RFDFLSSGTTCYSRCLDYARFRQICDET  150 (337)
Q Consensus       117 --l~~---------------------------------------~~--a---~pklII~~~S~~~~~~d~~~l~eia~~~  150 (337)
                        +++                                       .+  +   ++++|++... .+...|+++|.++|+++
T Consensus        69 ~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~-tG~~~~l~~i~~l~~~~  147 (375)
T 2fnu_A           69 EFSADRNEIITTPISFVATANMLLESGYTPVFAGIKNDGNIDELALEKLINERTKAIVSVDY-AGKSVEVESVQKLCKKH  147 (375)
T ss_dssp             CCCTTSCEEEECSSSCTHHHHHHHHTTCEEEECCBCTTSSBCGGGSGGGCCTTEEEEEEECG-GGCCCCHHHHHHHHHHH
T ss_pred             ccCCCCCEEEECCCccHhHHHHHHHCCCEEEEeccCCCCCCCHHHHHhhcCcCceEEEEeCC-cCCccCHHHHHHHHHHc
Confidence              654                                       11  1   1576666544 78889999999999999


Q ss_pred             CCeEEEeccccccccc--------e--eeeec---c-----CCchhhh---hHHHHHhhccCCCC------------CCC
Q psy10669        151 DSIMFADMSHISGLIA--------G--VKGVT---K-----TGEKILY---DYEEKINNAVFPSL------------QGG  197 (337)
Q Consensus       151 ga~l~vD~AH~~Gli~--------g--~~~T~---~-----~Gg~i~~---~l~~~i~~~~~p~~------------~g~  197 (337)
                      |+++++|++|..|...        +  ...+.   |     .|++++.   ++.+.+.+....+.            .+.
T Consensus       148 ~~~li~D~a~~~~~~~~~~~~~~~~~i~~~s~s~~K~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (375)
T 2fnu_A          148 SLSFLSDSSHALGSEYQNKKVGGFALASVFSFHAIKPITTAEGGAVVTNDSELHEKMKLFRSHGMLKKDFFEGEVKSIGH  227 (375)
T ss_dssp             TCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHTBTTEEESSSSCEEESSCCC
T ss_pred             CCEEEEECccccCCeECCeeccccCCeEEEeCCCCCCccccCceEEEeCCHHHHHHHHHHHhcCCccccccccccccccc
Confidence            9999999999987643        1  11221   2     2445552   36555554321111            111


Q ss_pred             C-cHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecC--C--CCCeEEEEEecCCCc-chHHHHHH
Q psy10669        198 P-HNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTG--G--TDVHLILIDLRKNKL-TGSKVELV  270 (337)
Q Consensus       198 ~-~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~--~--t~~h~v~V~~~~~~~-~~~~~~~~  270 (337)
                      . .++.+++ ++++...  ..+++..++..+++++|.+.|.+. |+++...  +  ...+++++.+...+. +..++.+.
T Consensus       228 ~~~~~~~~~-a~~~~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  304 (375)
T 2fnu_A          228 NFRLNEIQS-ALGLSQL--KKAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLYPILMHQKFFTCKKLILES  304 (375)
T ss_dssp             BCCCCHHHH-HHHHHHH--TTHHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCSCEEEEECGGGGGGHHHHHHH
T ss_pred             cCCCCHHHH-HHHHHHH--HHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCCCcceEEEEEEeCccccchHHHHHHH
Confidence            1 1222221 1222222  345788899999999999999985 8888652  1  234667788765444 67788888


Q ss_pred             HhhcCceec
Q psy10669        271 LEEIAIACN  279 (337)
Q Consensus       271 L~~~gI~v~  279 (337)
                      |.+.||.+.
T Consensus       305 L~~~gi~v~  313 (375)
T 2fnu_A          305 LHKRGILAQ  313 (375)
T ss_dssp             HHHTTEECB
T ss_pred             HHHCCCCcc
Confidence            988899987

>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*

Probab=99.36  E-value=4.2e-11  Score=113.94  Aligned_cols=259  Identities=11%  Similarity=0.087  Sum_probs=166.7

Q ss_pred             cHHHHHHHHHHHhhcccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcC--
Q psy10669         15 DPELYSLIKKEKHRQINGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFN--   90 (337)
Q Consensus        15 d~~~~~~~~~e~~rq~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg--   90 (337)
                      +..+++...++.. ....|.|...++-.  +|.|.+++...+.+. ..++     -.+.   .++....++.+++++|  
T Consensus        18 g~~~~d~~~~~~~-~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y-----~~~~---~~~~~~l~~~l~~~~g~~   87 (391)
T 4dq6_A           18 FSSKWSEMEKKYG-TNDLLPMWVADMDFKAAPCIIDSLKNRLEQE-IYGY-----TTRP---DSYNESIVNWLYRRHNWK   87 (391)
T ss_dssp             TBHHHHCHHHHHS-CSCSEECCSSSCSSCCCHHHHHHHHHHHTTC-CCCC-----BCCC---HHHHHHHHHHHHHHHCCC
T ss_pred             CceeeeecccccC-CCCceeccccCCCCCCCHHHHHHHHHHHhCC-CCCC-----CCCC---HHHHHHHHHHHHHHhCCC
Confidence            3445555443222 24567887777654  799999998765431 1111     1122   4555555678889998  


Q ss_pred             CCCCCCcceeecCCC-chhHHHHHHhhCCc------------------------------c--------cc--------c
Q psy10669         91 LDPEQWGCNVQPYSG-SPANFAVCEKALPT------------------------------N--------NA--------R  123 (337)
Q Consensus        91 ~~~~~~~~~v~~~Sg-t~AN~~v~~aLl~~------------------------------~--------~a--------~  123 (337)
                      .+.    .++.+++| +.|+..++.+++++                              .        .-        +
T Consensus        88 ~~~----~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~  163 (391)
T 4dq6_A           88 IKS----EWLIYSPGVIPAISLLINELTKANDKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYEDIENKIK  163 (391)
T ss_dssp             CCG----GGEEEESCHHHHHHHHHHHHSCTTCEEEECSSCCTHHHHHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCT
T ss_pred             CcH----HHeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCHHHHHHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhh
Confidence            444    25677666 78888888888754                              1        00        0


Q ss_pred             -ccEEEEcCccc--ccc---cChHHHHHHhhhcCCeEEEeccccccccce------------------eeeec-c-----
Q psy10669        124 -FDFLSSGTTCY--SRC---LDYARFRQICDETDSIMFADMSHISGLIAG------------------VKGVT-K-----  173 (337)
Q Consensus       124 -pklII~~~S~~--~~~---~d~~~l~eia~~~ga~l~vD~AH~~Gli~g------------------~~~T~-~-----  173 (337)
                       +++|++..-.+  +..   .++++|.++|+++|++|++|++|..+...|                  +++|. |     
T Consensus       164 ~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  243 (391)
T 4dq6_A          164 DVKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIA  243 (391)
T ss_dssp             TEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHHTCG
T ss_pred             cCCEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEeeccccccccCCCCccCHHHcCccccCcEEEEEechhhccCc
Confidence             46666543232  344   456677788999999999999997643321                  12232 2     


Q ss_pred             --CCchhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh--CCCEEecC
Q psy10669        174 --TGEKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK--RGYHVVTG  246 (337)
Q Consensus       174 --~Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~--~G~~v~~~  246 (337)
                        ..|+++.   ++.+.+.....+...++++++..+++..++.+. ....++.++++.++.++|.+.|.+  .|+++..+
T Consensus       244 G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~  322 (391)
T 4dq6_A          244 GLQSSYVVLPDEKDYKLLDDAFTRIDIKRNNCFSLVATEASYNNG-ESWLESFLEYLESNIDFAIKYINENMPKLKVRKP  322 (391)
T ss_dssp             GGCCEEEECCSHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCC
T ss_pred             ccceEEEEeCCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhch-HHHHHHHHHHHHHHHHHHHHHHHhhCCCCEecCC
Confidence              1256543   466666654334445678888888888888763 234577888999999999999987  38988752


Q ss_pred             CCCCeEEEEEecCCCcchHHHHHHHhhc-CceeccCc--------ccchhhh
Q psy10669        247 GTDVHLILIDLRKNKLTGSKVELVLEEI-AIACNKNT--------GISLAAE  289 (337)
Q Consensus       247 ~t~~h~v~V~~~~~~~~~~~~~~~L~~~-gI~v~~~~--------girig~~  289 (337)
                       ..+..+++++...+.+..++.+.|.+. ||.+.+..        .+||+..
T Consensus       323 -~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~  373 (391)
T 4dq6_A          323 -EGTYLLWVDFSALGLSDEELESILVQKGKVALNQGNSFGIGGSGYQRINLA  373 (391)
T ss_dssp             -SBSSEEEEECGGGCCCHHHHHHHHHHTTCEECEEGGGGCTTCTTEEEEECC
T ss_pred             -CccEEEEEEhhhcCCCHHHHHHHHHHhCCEEeeCchhhCCCCCCeEEEEEc
Confidence             334555688876556788888888876 99997532        4777643

>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*

Probab=99.36  E-value=3.6e-12  Score=125.49  Aligned_cols=200  Identities=11%  Similarity=0.075  Sum_probs=137.3

Q ss_pred             HHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHhhCCc-----------------------------------------
Q psy10669         82 QQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEKALPT-----------------------------------------  119 (337)
Q Consensus        82 ~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~aLl~~-----------------------------------------  119 (337)
                      ++++++++|++.    ..|.+++| +.++..++.+++++                                         
T Consensus       117 ~~~la~~~g~~~----~~v~~t~g~t~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~  192 (465)
T 3e9k_A          117 VGLMKDIVGANE----KEIALMNALTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKP  192 (465)
T ss_dssp             HGGGHHHHTCCG----GGEEECSCHHHHHHHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECC
T ss_pred             HHHHHHHcCCCc----CCEEEECCHHHHHHHHHHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEec
Confidence            578899999985    35888888 56666667777542                                         


Q ss_pred             --------------cc----ccccEEEEcCcc--cccccChHHHHHHhhhcCCeEEEeccccccccc---------eeee
Q psy10669        120 --------------NN----ARFDFLSSGTTC--YSRCLDYARFRQICDETDSIMFADMSHISGLIA---------GVKG  170 (337)
Q Consensus       120 --------------~~----a~pklII~~~S~--~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~---------g~~~  170 (337)
                                    .+    .++++|++..-.  .+...|+++|.++|+++|+++++|++|+.|.+.         .+++
T Consensus       193 ~~~~~~~d~~~l~~~i~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~g~~~~~~~~~~~D~~~~  272 (465)
T 3e9k_A          193 REGEETLRIEDILEVIEKEGDSIAVILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHAVGNVELYLHDWGVDFACW  272 (465)
T ss_dssp             CTTCSSCCHHHHHHHHHHHGGGEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCCEEEE
T ss_pred             CCCCCccCHHHHHHHHHhcCCCeEEEEEeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhhcCCcCCchhhcCCCEEEE
Confidence                          00    124677776433  368899999999999999999999999999876         1222


Q ss_pred             e-cc------CC-chhhh--hHHHHHhhccC--------------------C----CCCCCCcHHHHHHHHHHHHHHhch
Q psy10669        171 V-TK------TG-EKILY--DYEEKINNAVF--------------------P----SLQGGPHNHAIGAIATAMLQAQSD  216 (337)
Q Consensus       171 T-~~------~G-g~i~~--~l~~~i~~~~~--------------------p----~~~g~~~~~~iaala~a~~e~~~~  216 (337)
                      + +|      .| |+++.  ++.+.+.+...                    +    ...|+++...++++.+++..+.+.
T Consensus       273 s~~K~l~~gp~~~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~~~~~  352 (465)
T 3e9k_A          273 CSYKYLNAGAGGIAGAFIHEKHAHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEIFKQA  352 (465)
T ss_dssp             CSSSTTCCCTTCCCEEEECGGGTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHHHH
T ss_pred             CcccccccCCCceEEEEEcHHHHhhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHHHHHc
Confidence            2 22      22 33322  33322221100                    0    113589999999999999887654


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHh-----------CCCEEecCCC---CCeEEEEEecCCCcchHHHHHHHhhcCceeccC-
Q psy10669        217 EFKSYQAQVKANASHLSDEMIK-----------RGYHVVTGGT---DVHLILIDLRKNKLTGSKVELVLEEIAIACNKN-  281 (337)
Q Consensus       217 ~~~~y~~~v~~na~~l~~~L~~-----------~G~~v~~~~t---~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~-  281 (337)
                      ..++.+++..+++++|.+.|.+           .|+++++...   ...++++.+.   .++.++.+.|.+.||.+... 
T Consensus       353 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~~---~~~~~l~~~L~~~Gi~v~~~~  429 (465)
T 3e9k_A          353 TMKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNIITPSHVEERGCQLTITFS---VPNKDVFQELEKRGVVCDKRN  429 (465)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHCC---------CEEECSCSSGGGBCSCEEEEEC---CTTCCHHHHHHTTTEECEEET
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCeEEeCCCCHhhcccEEEEEec---CCHHHHHHHHHHCCEEEecCC
Confidence            4688999999999999999998           7999886311   1456667665   24566788888889998643 


Q ss_pred             -cccchhh
Q psy10669        282 -TGISLAA  288 (337)
Q Consensus       282 -~girig~  288 (337)
                       ..|||+.
T Consensus       430 ~~~iRis~  437 (465)
T 3e9k_A          430 PNGIRVAP  437 (465)
T ss_dssp             TTEEEEBC
T ss_pred             CCEEEEeC
Confidence             2788874

>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*

Probab=99.36  E-value=7.1e-11  Score=111.28  Aligned_cols=247  Identities=13%  Similarity=0.067  Sum_probs=156.7

Q ss_pred             cceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCc---cchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC--
Q psy10669         31 NGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG---NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG--  105 (337)
Q Consensus        31 ~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G---~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg--  105 (337)
                      +.+++.+....+||.|++++...+. ++  .++|+..|+.   .....++...+++.+++++|.+.+   .+|.+++|  
T Consensus         3 ~~~~~~~g~~~~p~~v~~a~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~---~~v~~~~g~g   76 (360)
T 1w23_A            3 QVFNFNAGPSALPKPALERAQKELL-NF--NDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPND---YQILFLQGGA   76 (360)
T ss_dssp             CCEECCSSSCCCCHHHHHHHHHTSS-SS--TTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTT---EEEEEESSHH
T ss_pred             ceEeecCCCcCCCHHHHHHHHHHhh-hh--ccccccccccCCCCHHHHHHHHHHHHHHHHHhCCCCC---ceEEEECCcc
Confidence            4577888888889999999987653 33  3344433322   122233444456789999998743   25777665  


Q ss_pred             chhHHHHHHhhCCc-------------------------------------------cc-c---cccEEEEcC-cc-ccc
Q psy10669        106 SPANFAVCEKALPT-------------------------------------------NN-A---RFDFLSSGT-TC-YSR  136 (337)
Q Consensus       106 t~AN~~v~~aLl~~-------------------------------------------~~-a---~pklII~~~-S~-~~~  136 (337)
                      +.|+..++.+++.+                                           +. +   ++|+|++.. ++ .+.
T Consensus        77 t~al~~~~~~l~~~~~~g~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~d~~~l~~~~i~~~~k~v~~~~~~nptG~  156 (360)
T 1w23_A           77 SLQFTMLPMNLLTKGTIGNYVLTGSWSEKALKEAKLLGETHIAASTKANSYQSIPDFSEFQLNENDAYLHITSNNTIYGT  156 (360)
T ss_dssp             HHHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHTTSEEEEEEECGGGTSCSCCCGGGCCCCTTEEEEEEESEETTTTE
T ss_pred             hHHHHHHHHHhcCCCCcccEEEecchhHHHHHHHHHhCCeEEeecccccCcCCccchHhhccCCCCCEEEEeCCCCCcce
Confidence            57787777777531                                           11 1   157777653 22 345


Q ss_pred             ccChHHHHHHhhhcCCeEEEeccccccccc-------eeeeecc-----CC-chhhh--hHHHHHhhcc-----------
Q psy10669        137 CLDYARFRQICDETDSIMFADMSHISGLIA-------GVKGVTK-----TG-EKILY--DYEEKINNAV-----------  190 (337)
Q Consensus       137 ~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-------g~~~T~~-----~G-g~i~~--~l~~~i~~~~-----------  190 (337)
                      ..|     +|++++|+++++|++|..|...       .++++.+     .| |+++.  ++.+++.+..           
T Consensus       157 ~~~-----~i~~~~~~~li~D~a~~~~~~~~~~~~~di~~~s~sK~~~~~G~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (360)
T 1w23_A          157 QYQ-----NFPEINHAPLIADMSSDILSRPLKVNQFGMIYAGAQKNLGPSGVTVVIVKKDLLNTKVEQVPTMLQYATHIK  231 (360)
T ss_dssp             ECS-----SCCCCCSSCEEEECTTTTTSSCCCGGGCSEEEEETTTTTSCTTCEEEEEEHHHHCSCCTTCCGGGCHHHHHH
T ss_pred             ecc-----cccccCCceEEEechhhcCCCCcCcccCCEEEEEcccccCCCCcEEEEEcHHHHhhcccCCcchhhhhhhhh
Confidence            445     5566899999999999988654       2334432     24 55554  3444333321           


Q ss_pred             CCCCCCCCcHHHHHHHHHHHHHHhch-hhHHHHHHHHHHHHHHHHHHHhCC-C-EEe--cCCCCCeEEEEEecCCCcchH
Q psy10669        191 FPSLQGGPHNHAIGAIATAMLQAQSD-EFKSYQAQVKANASHLSDEMIKRG-Y-HVV--TGGTDVHLILIDLRKNKLTGS  265 (337)
Q Consensus       191 ~p~~~g~~~~~~iaala~a~~e~~~~-~~~~y~~~v~~na~~l~~~L~~~G-~-~v~--~~~t~~h~v~V~~~~~~~~~~  265 (337)
                      .....++++...++++..++..+.+. ..++.+++..++++++.+.|.+.+ + .+.  ....-++++++.+.. +.+..
T Consensus       232 ~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  310 (360)
T 1w23_A          232 SDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYVGHAEKGSRSLMNVTFNLRN-EELNQ  310 (360)
T ss_dssp             TTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTTSSEESSCGGGBCSSEEEEECSS-HHHHH
T ss_pred             ccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHccCcccccCCchhccCcEEEEEcCC-CccHH
Confidence            01224788889999998888876533 457889999999999999999875 4 543  111124477787753 22455


Q ss_pred             HHHHHHhhcCceeccCc----ccchhhh
Q psy10669        266 KVELVLEEIAIACNKNT----GISLAAE  289 (337)
Q Consensus       266 ~~~~~L~~~gI~v~~~~----girig~~  289 (337)
                      ++.+.|.+.||.+.+..    .|||+..
T Consensus       311 ~~~~~l~~~gi~~~~~~~~~~~iRis~~  338 (360)
T 1w23_A          311 QFLAKAKEQGFVGLNGHRSVGGCRASIY  338 (360)
T ss_dssp             HHHHHHHHTTEESCBCCTTTCSEEEECC
T ss_pred             HHHHHHHHCCeeeecCCCCCCeEEEEec
Confidence            66677878899986542    5777654

>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}

Probab=99.35  E-value=8.1e-12  Score=119.49  Aligned_cols=234  Identities=14%  Similarity=0.078  Sum_probs=156.5

Q ss_pred             eccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHH
Q psy10669         36 IASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCE  114 (337)
Q Consensus        36 ~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~  114 (337)
                      .++...++|.|++++...+.+.|  +++++.+..+ ....++...+++.+++++|++.    .++.+++| +.|+..++.
T Consensus        26 ~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~l~~~la~~~~~~~----~~v~~~~g~t~al~~~~~   98 (400)
T 3vax_A           26 AAATTRVDQRVADIVLHWMTAEF--GNAGSRHEYG-IRAKRGVERAREYLASTVSAEP----DELIFTSGATESNNIALL   98 (400)
T ss_dssp             CCCCSSSCHHHHHHHHHHHHHHH--SCSSCHHHHH-HHHHHHHHHHHHHHHHHTTCCG----GGEEEESCHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHHHhcc--CCCcccchhH-HHHHHHHHHHHHHHHHHcCCCC----CcEEEeCCHHHHHHHHHH
Confidence            34555679999999988766544  4555533322 2233444455678999999975    25666666 788877777


Q ss_pred             hhC----C----c-----------------------------------------ccc---cccEEEEcCcc--cccccCh
Q psy10669        115 KAL----P----T-----------------------------------------NNA---RFDFLSSGTTC--YSRCLDY  140 (337)
Q Consensus       115 aLl----~----~-----------------------------------------~~a---~pklII~~~S~--~~~~~d~  140 (337)
                      +++    +    .                                         +.+   ++++|++....  .+...|+
T Consensus        99 ~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l  178 (400)
T 3vax_A           99 GLAPYGERTGRRHIITSAIEHKAVLEPLEHLAGRGFEVDFLTPGPSGRISVEGVMERLRPDTLLVSLMHVNNETGVIQPV  178 (400)
T ss_dssp             TTHHHHHHHTCCEEEEETTSCHHHHHHHHHHHTTTCEEEEECCCTTCCCCHHHHHTTCCTTEEEEECCSBCTTTCBBCCH
T ss_pred             HHHHhhccCCCCEEEECccccHhHHHHHHHHHhcCCeEEEEccCCCCCcCHHHHHHhcCCCceEEEEECCCCCceeeCcH
Confidence            775    1    2                                         111   26777776433  3578899


Q ss_pred             HHHHHHhhhcCCeEEEeccccccccc--------eeeeec-c----CC-chhh-h-h--HH---HHHhhccC------CC
Q psy10669        141 ARFRQICDETDSIMFADMSHISGLIA--------GVKGVT-K----TG-EKIL-Y-D--YE---EKINNAVF------PS  193 (337)
Q Consensus       141 ~~l~eia~~~ga~l~vD~AH~~Gli~--------g~~~T~-~----~G-g~i~-~-~--l~---~~i~~~~~------p~  193 (337)
                      ++|.++|+++|+++++|++|+.|...        .++++. |    .| |+++ . +  +.   +.+.+..+      ..
T Consensus       179 ~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (400)
T 3vax_A          179 AELAQQLRATPTYLHVDAAQGYGKVPGDLTTPIDMISISGHKIGAPKGVGALVTRRREEMDDERVPLEPIMFGGGQERKL  258 (400)
T ss_dssp             HHHHHHHTTSSCEEEEECTTTTTTSGGGGGSCCSEEEEETGGGTSCSSCEEEEECBCSSSTTCBCCCCCSSCSSCTGGGT
T ss_pred             HHHHHHHHhcCCEEEEEhhhhcCCCCcChhhcCcEEEEeHHHhCCCCceEEEEEecchhccccccccCceecCCCceeee
Confidence            99999999999999999999987654        223333 2    22 3333 2 2  11   22222221      12


Q ss_pred             CCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCC--CCeEEEEEecCCCcchHHHHHHH
Q psy10669        194 LQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGT--DVHLILIDLRKNKLTGSKVELVL  271 (337)
Q Consensus       194 ~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t--~~h~v~V~~~~~~~~~~~~~~~L  271 (337)
                      ..++++...++++..++..+. ...++.+++..++.++|.+.|...|+++.....  ..+++.+.+.  +.+..++.+.|
T Consensus       259 ~~~~~~~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~L  335 (400)
T 3vax_A          259 RPGTLPVPLIMGLAEAAKIFE-AEHAQWQVAAQDLRSRLLAGLASTSFQVNGDQDHVVPHILNLSFE--DVDAEAFLVTL  335 (400)
T ss_dssp             SCSCCCHHHHHHHHHHHHHHH-HSHHHHHHHHHHHHHHHHHHHTTTTCEECSCTTSBCTTEEEEECT--TCCHHHHHHHH
T ss_pred             ecCCCCHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHhhCCCCEEEeCCcccCCCCEEEEEeC--CCCHHHHHHHH
Confidence            256788899999988887764 356889999999999999999977898875321  1356666554  45788888999


Q ss_pred             hhcCceecc
Q psy10669        272 EEIAIACNK  280 (337)
Q Consensus       272 ~~~gI~v~~  280 (337)
                      . .||.+..
T Consensus       336 ~-~gi~v~~  343 (400)
T 3vax_A          336 K-DLVAVAT  343 (400)
T ss_dssp             H-HHHHHTT
T ss_pred             h-cCcEEEe
Confidence            8 8998765

>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}

Probab=99.34  E-value=1.1e-11  Score=130.18  Aligned_cols=205  Identities=13%  Similarity=0.074  Sum_probs=144.5

Q ss_pred             HHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHhhCCc-------------------------------c------
Q psy10669         79 IVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEKALPT-------------------------------N------  120 (337)
Q Consensus        79 ~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~aLl~~-------------------------------~------  120 (337)
                      ..+++.++++||.+.     .+.+++| +.||.+++.+++++                               .      
T Consensus       208 ~~~ee~la~l~G~d~-----~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~~~~~~G~~~v~v~~~~~~~g~~  282 (755)
T 2vyc_A          208 GESEKYAARVFGADR-----SWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYMVPSRNRYGII  282 (755)
T ss_dssp             HHHHHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHHCCEEEEECCCBCTTSCB
T ss_pred             HHHHHHHHHHhCCCc-----eEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCCCCccccc
Confidence            345678999999985     5777888 47899999999765                               1      


Q ss_pred             --c-----c--------c--c----------cEEEEcCcc-cccccChHHHHHHhhhcCCeEEEecccccccc-------
Q psy10669        121 --N-----A--------R--F----------DFLSSGTTC-YSRCLDYARFRQICDETDSIMFADMSHISGLI-------  165 (337)
Q Consensus       121 --~-----a--------~--p----------klII~~~S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli-------  165 (337)
                        .     -        +  |          ++++++.++ ++...|+++|.++|+++|+++++|+||+.++.       
T Consensus       283 g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~pn~~G~v~dl~~I~~ia~~~~~~livDeA~~~~~~~~~~~~~  362 (755)
T 2vyc_A          283 GPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIYAD  362 (755)
T ss_dssp             CCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESSCTTSEEECHHHHHHHHTTTCSEEEEECTTCTTGGGCGGGTT
T ss_pred             cccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECCCCCceecCHHHHHHHHHHcCCEEEEECcCchhcccCcccCC
Confidence              0     0        0  1          266655444 47889999999999999999999999975321       


Q ss_pred             ----ce-----------eeeeccC-------Cchhhh--h---H-HHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchh
Q psy10669        166 ----AG-----------VKGVTKT-------GEKILY--D---Y-EEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDE  217 (337)
Q Consensus       166 ----~g-----------~~~T~~~-------Gg~i~~--~---l-~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~  217 (337)
                          .+           ++++.||       ||++..  +   + ...++........++|+.+.++|+.+|+..+....
T Consensus       363 ~~~~~g~~aD~~~~~~iv~~S~hK~L~g~~~g~~i~~~~~~~~i~~~~~~~~~~~~~s~sp~~~~iaal~aA~~~l~~~g  442 (755)
T 2vyc_A          363 HYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQAYMMHATTSPLYAICASNDVAVSMMDGNS  442 (755)
T ss_dssp             SSSSCSCCCCCSSBEEEEEEETTTSSSCCTTCEEEEEECCBTCCCHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHSTHH
T ss_pred             cchhcCCcCCccCCCeEEEECccccccCcCCeeeeeecCcccccCHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhhh
Confidence                01           3334332       455543  2   2 23444443233367999999999999998886544


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhC-C---------CEEecCC----------------------------------------
Q psy10669        218 FKSYQAQVKANASHLSDEMIKR-G---------YHVVTGG----------------------------------------  247 (337)
Q Consensus       218 ~~~y~~~v~~na~~l~~~L~~~-G---------~~v~~~~----------------------------------------  247 (337)
                      ++++.+++++++++++++|.+. |         |++++..                                        
T Consensus       443 g~~~~~~~~~~a~~~r~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~  522 (755)
T 2vyc_A          443 GLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQDCWVMHPGESWHGFK  522 (755)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEESSCSEEECTTTCCEEEGGGSCHHHHHHCGGGTBCCTTCTTTCCT
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccccccccccceeeccCchhccccccccccccccccchhccchhhhhccCccccccccc
Confidence            7889999999999999999883 5         6655411                                        


Q ss_pred             ---C-----CCeEEEEEecCC---------CcchHHHHHHHhhcCceeccCc--ccchhh
Q psy10669        248 ---T-----DVHLILIDLRKN---------KLTGSKVELVLEEIAIACNKNT--GISLAA  288 (337)
Q Consensus       248 ---t-----~~h~v~V~~~~~---------~~~~~~~~~~L~~~gI~v~~~~--girig~  288 (337)
                         +     |.+.+.+++...         |+++.++.+.|+++||.+++..  .+|+-+
T Consensus       523 ~~~~~~~~~Dp~~v~i~~~~~~~~G~~~~~g~~~~~l~~~L~~~gI~~e~~~~~~v~~~~  582 (755)
T 2vyc_A          523 DIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTRTTDFQIMFLF  582 (755)
T ss_dssp             TCCTTSEEECTTEEEEECSCBCTTSSBCSSCCCHHHHHHHHHTTTCCCSEECSSEEEEEC
T ss_pred             ccCCCccccCCeEEEEEcCCCCCCCCccccCCcHHHHHHHHHHCCCEEeecCCCeEEEEE
Confidence               1     456778877643         3455999999999999998754  555543

>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}

Probab=99.33  E-value=1.1e-11  Score=118.92  Aligned_cols=247  Identities=10%  Similarity=0.016  Sum_probs=150.3

Q ss_pred             eeeeccCCCC----CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-ch
Q psy10669         33 IELIASENFT----SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SP  107 (337)
Q Consensus        33 i~l~asen~~----~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~  107 (337)
                      +..+.++||.    +|.|++++...+.+....+++.   ..|.   .++.....+.+++++|.+...- .++.+++| +.
T Consensus        41 ~id~~~g~~~~~~~~~~v~~a~~~~~~~~~~~~y~~---~~g~---~~l~~~l~~~l~~~~g~~~~~~-~~i~~~~g~~~  113 (407)
T 3nra_A           41 PVDFSHGDVDAHEPTPGAFDLFSAGVQSGGVQAYTE---YRGD---LGIRDLLAPRLAAFTGAPVDAR-DGLIITPGTQG  113 (407)
T ss_dssp             CEETTSCCTTTSCCCTTHHHHHHHHHHHTHHHHSCC---TTCC---HHHHHHHHHHHHHHHTSCCCTT-TSEEEESHHHH
T ss_pred             eeeecCcCCCCCCCcHHHHHHHHHHHhcCCCCCcCC---CCCC---HHHHHHHHHHHHHHhCCCCCCC-CcEEEeCCcHH
Confidence            4455666655    8999999987654311111211   1233   2333333467888899742000 13555555 78


Q ss_pred             hHHHHHHhhCCc----------------------------cc-------------------c---cccEEEEcCccc--c
Q psy10669        108 ANFAVCEKALPT----------------------------NN-------------------A---RFDFLSSGTTCY--S  135 (337)
Q Consensus       108 AN~~v~~aLl~~----------------------------~~-------------------a---~pklII~~~S~~--~  135 (337)
                      ||..++.+++++                            ..                   +   ++++|++..-.+  +
T Consensus       114 a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG  193 (407)
T 3nra_A          114 ALFLAVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKAGARVFLFSNPNNPAG  193 (407)
T ss_dssp             HHHHHHHTTCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHTTCCEEEEESSCTTTC
T ss_pred             HHHHHHHHhCCCCCEEEEcCCcccchHHHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhhCCcEEEEcCCCCCCC
Confidence            998888988654                            10                   0   256665543233  4


Q ss_pred             cccC---hHHHHHHhhhcCCeEEEeccccccccce------------------eeeeccC-----C---chhhh--hHHH
Q psy10669        136 RCLD---YARFRQICDETDSIMFADMSHISGLIAG------------------VKGVTKT-----G---EKILY--DYEE  184 (337)
Q Consensus       136 ~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~g------------------~~~T~~~-----G---g~i~~--~l~~  184 (337)
                      ...|   +++|.++|+++|+++++|++|..+..++                  +++|..|     |   |+++.  ++.+
T Consensus       194 ~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~  273 (407)
T 3nra_A          194 VVYSAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGSRAIIA  273 (407)
T ss_dssp             CCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEECHHHHH
T ss_pred             cccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcCHHHHH
Confidence            6667   7788899999999999999998744431                  1233322     2   66654  4666


Q ss_pred             HHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCCCcc
Q psy10669        185 KINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKNKLT  263 (337)
Q Consensus       185 ~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~~~~  263 (337)
                      .+.....+... ++++...+++..++.+. ....++.++++.++.++|.+.|.+. |+++..+ ..+..+++++...+.+
T Consensus       274 ~l~~~~~~~~~-~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~~~~~~~~~~~~~~  350 (407)
T 3nra_A          274 RMEKLQAIVSL-RAAGYSQAVLRGWFDEA-PGWMEDRIARHQAIRDELLHVLRGCEGVFARTP-QAGSYLFPRLPKLAVA  350 (407)
T ss_dssp             HHHHHHHHHTS-SSCHHHHGGGGGTTCCC-TTHHHHHHHHHHHHHHHHHHHHHTSTTCBCCCC-SBSSEECCBCCCBSSC
T ss_pred             HHHHHHhhhcc-CCChHHHHHHHHHHhcc-chHHHHHHHHHHHHHHHHHHHHhcCCCceeccC-CeeEEEEEeCCCCCCC
Confidence            55543333323 34445555544444321 1335778889999999999999986 8887642 3345677777765667


Q ss_pred             hHHHHHHHh-hcCceeccCc--------ccchhhh
Q psy10669        264 GSKVELVLE-EIAIACNKNT--------GISLAAE  289 (337)
Q Consensus       264 ~~~~~~~L~-~~gI~v~~~~--------girig~~  289 (337)
                      ..++.+.|. ++||.+.+..        .|||+..
T Consensus       351 ~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~  385 (407)
T 3nra_A          351 PAEFVKILRLQAGVVVTPGTEFSPHTADSVRLNFS  385 (407)
T ss_dssp             HHHHHHHHHHHHCEECEEGGGTCTTCTTBEEEECC
T ss_pred             HHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEeC
Confidence            888888885 5799987632        5777643

>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}

Probab=99.32  E-value=9.9e-11  Score=113.57  Aligned_cols=245  Identities=12%  Similarity=0.094  Sum_probs=159.3

Q ss_pred             ccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcC--CCCCCCcceeecCCC
Q psy10669         30 INGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFN--LDPEQWGCNVQPYSG  105 (337)
Q Consensus        30 ~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg--~~~~~~~~~v~~~Sg  105 (337)
                      +..|.|...++-.  +|.|.+++...+... ..+++.      .  ..++.....+.+++.+|  .+.    ..|.+++|
T Consensus        61 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~------~--~~~l~~~l~~~l~~~~g~~~~~----~~v~~~~g  127 (421)
T 3l8a_A           61 PELLQMWVADMDFLPVPEIKEAIINYGREH-IFGYNY------F--NDDLYQAVIDWERKEHDYAVVK----EDILFIDG  127 (421)
T ss_dssp             TTCEECCSSCCCSCCCHHHHHHHHHHHHHC-CSSCBC------C--CHHHHHHHHHHHHHHHCCCCCG----GGEEEESC
T ss_pred             CCeeecccCCCCCCCCHHHHHHHHHHHhcC-CcCCCC------C--CHHHHHHHHHHHHHHhCCCCCH----HHEEEcCC
Confidence            4567777666544  899999998765431 112211      1  14555555567888888  433    24778777


Q ss_pred             -chhHHHHHHhhCCc--------------------------------------------c--c--ccccEEEEcCccc--
Q psy10669        106 -SPANFAVCEKALPT--------------------------------------------N--N--ARFDFLSSGTTCY--  134 (337)
Q Consensus       106 -t~AN~~v~~aLl~~--------------------------------------------~--~--a~pklII~~~S~~--  134 (337)
                       +.||..++.+++++                                            +  +  .++++|++..-.+  
T Consensus       128 ~~ea~~~a~~~~~~~gd~Vi~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil~~p~npt  207 (421)
T 3l8a_A          128 VVPAISIALQAFSEKGDAVLINSPVYYPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPG  207 (421)
T ss_dssp             HHHHHHHHHHHHSCTEEEEEEEESCCHHHHHHHHHTTEEEEEEECEEETTEEECCHHHHHHHHHHTTEEEEEEESSBTTT
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCCCcHHHHHHHHHCCCEEEeccccccCCCeeeCHHHHHHHhhccCCeEEEECCCCCCC
Confidence             56998888998754                                            0  0  1257777653222  


Q ss_pred             ccc---cChHHHHHHhhhcCCeEEEeccccccccce------------------eeeec-c----CC---chhhh---hH
Q psy10669        135 SRC---LDYARFRQICDETDSIMFADMSHISGLIAG------------------VKGVT-K----TG---EKILY---DY  182 (337)
Q Consensus       135 ~~~---~d~~~l~eia~~~ga~l~vD~AH~~Gli~g------------------~~~T~-~----~G---g~i~~---~l  182 (337)
                      +..   .++++|+++|+++|++|++|++|.-....|                  ++.|. |    .|   |+++.   ++
T Consensus       208 G~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~~~l  287 (421)
T 3l8a_A          208 GRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNESL  287 (421)
T ss_dssp             TBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCSHHH
T ss_pred             CCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCCHHH
Confidence            355   467778899999999999999997532210                  12222 2    12   44443   46


Q ss_pred             HHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-CCCEEecCCCCCeEEEEEecCCC
Q psy10669        183 EEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-RGYHVVTGGTDVHLILIDLRKNK  261 (337)
Q Consensus       183 ~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~G~~v~~~~t~~h~v~V~~~~~~  261 (337)
                      .+.+.........+++++..++++..++.+. ....++.++++.++.++|.+.|.+ .|+.+..+ ..+.+.++++...+
T Consensus       288 ~~~~~~~~~~~~~~~~n~~~~~a~~aal~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~i~~~~~-~~~~~~~v~~~~~~  365 (421)
T 3l8a_A          288 RRKFQYRQLANNQHEVPTVGMIATQAAFQYG-KPWLEELKTVIEGNIKLVIKELEAKTKIKVMEP-EGTYLVWLDFSAYA  365 (421)
T ss_dssp             HHHHHHHHHHTTCSCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHCSCEEECC-SBSSEEEEECGGGT
T ss_pred             HHHHHHHHHhcccCCCCHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHhCCCceEeCC-CeeEEEEEeccccC
Confidence            6666554323345578888988888888763 233467888899999999999988 69988752 33556668887755


Q ss_pred             cchHHHHHHH-hhcCceeccCc--------ccchhhh
Q psy10669        262 LTGSKVELVL-EEIAIACNKNT--------GISLAAE  289 (337)
Q Consensus       262 ~~~~~~~~~L-~~~gI~v~~~~--------girig~~  289 (337)
                      .+..++.+.| +++||.+++-.        .+||+..
T Consensus       366 ~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~  402 (421)
T 3l8a_A          366 IAQPQLSEKLQNEAKVVLNDGAHFGKEGKYFARLNVA  402 (421)
T ss_dssp             CCTTHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECC
T ss_pred             CCHHHHHHHHHHhCCEEEECchhhCCCCCCEEEEEec
Confidence            6677777777 46799997621        5777543

>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3

Probab=99.30  E-value=1.4e-10  Score=109.98  Aligned_cols=241  Identities=12%  Similarity=0.057  Sum_probs=158.6

Q ss_pred             ccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCC-CCcceeecC-CCch
Q psy10669         30 INGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPE-QWGCNVQPY-SGSP  107 (337)
Q Consensus        30 ~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~-~~~~~v~~~-Sgt~  107 (337)
                      .+.+.+.++-..++|.|++++...+.+ +           ++.........+++.++++++.... .. .++.++ ||+.
T Consensus         4 ~~~~~~~p~p~~~~~~v~~a~~~~~~~-~-----------~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~v~~~~g~t~   70 (385)
T 2bkw_A            4 SVDTLLIPGPIILSGAVQKALDVPSLG-H-----------TSPEFVSIFQRVLKNTRAVFKSAAASKS-QPFVLAGSGTL   70 (385)
T ss_dssp             CCCEECSSSSCCCCHHHHHTTSCCCCC-T-----------TSHHHHHHHHHHHHHHHHHTTCCGGGTC-EEEEEESCTTH
T ss_pred             ccceeecCCCcCchHHHHHHHhccccc-c-----------CCHHHHHHHHHHHHHHHHHhCCCCCCCC-ceEEEcCchHH
Confidence            355788899888999999998754221 1           1111112222345677888876410 00 145555 5589


Q ss_pred             hHHHHHHhhC---Cc------------------------------cc-----------------c-cccEEEEcCcc--c
Q psy10669        108 ANFAVCEKAL---PT------------------------------NN-----------------A-RFDFLSSGTTC--Y  134 (337)
Q Consensus       108 AN~~v~~aLl---~~------------------------------~~-----------------a-~pklII~~~S~--~  134 (337)
                      |+..++.+++   ++                              ..                 . ++++|++..-.  .
T Consensus        71 al~~~~~~~~~~~~~gd~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~npt  150 (385)
T 2bkw_A           71 GWDIFASNFILSKAPNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPLKIGESVPLELITEKLSQNSYGAVTVTHVDTST  150 (385)
T ss_dssp             HHHHHHHHHSCTTCSCCEEEEECSSHHHHHHHHHHHHTTCEEEEECCSSTTSCCCHHHHHHHHHHSCCSEEEEESEETTT
T ss_pred             HHHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCceEEEecCCCCCCCCHHHHHHHHhcCCCCEEEEEccCCCc
Confidence            9988888886   43                              10                 0 26788776322  3


Q ss_pred             ccccChHHHHHHhhhc--CCeEEEeccccccccc------e---eeeec-c-----CC-chhhh--hHHH-HHhh-----
Q psy10669        135 SRCLDYARFRQICDET--DSIMFADMSHISGLIA------G---VKGVT-K-----TG-EKILY--DYEE-KINN-----  188 (337)
Q Consensus       135 ~~~~d~~~l~eia~~~--ga~l~vD~AH~~Gli~------g---~~~T~-~-----~G-g~i~~--~l~~-~i~~-----  188 (337)
                      +...|+++|.++|+++  |+++++|++|..|...      +   ++++. |     .| |+++.  ++.+ .+++     
T Consensus       151 G~~~~l~~i~~~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~G~G~~~~~~~~~~~~l~~~~~~~  230 (385)
T 2bkw_A          151 AVLSDLKAISQAIKQTSPETFFVVDAVCSIGCEEFEFDEWGVDFALTASQKAIGAPAGLSISLCSSRFMDYALNDSKNGH  230 (385)
T ss_dssp             TEECCHHHHHHHHHHHCTTSEEEEECTTTTTTSCCCTTTTTCSEEEEESSSTTCCCSCEEEEEECHHHHHHHTCHHHHCC
T ss_pred             CeEcCHHHHHHHHHhhCCCCEEEEECccccCCccccccccCceEEEecCccccccCCcceEEEEcHHHHHHHHhhccCCC
Confidence            6788999999999999  9999999999987653      1   33333 3     24 55543  3433 3310     


Q ss_pred             ----------------ccCC---CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHH-HhCCCEEecC-C
Q psy10669        189 ----------------AVFP---SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEM-IKRGYHVVTG-G  247 (337)
Q Consensus       189 ----------------~~~p---~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L-~~~G~~v~~~-~  247 (337)
                                      ...+   ...++++.+.++++..++..+.+...++.+++..++.++|.+.| .+.|+++..+ +
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~  310 (385)
T 2bkw_A          231 VHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNGLQLTSVSRYP  310 (385)
T ss_dssp             CSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTTCCEESSCSS
T ss_pred             CCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhcCceecccCc
Confidence                            0001   11357888999999888887654336788899999999999999 8889988742 1


Q ss_pred             ---CCCeEEEEEecCCCcchHHHHHHHhhcCceeccCc-------ccchh
Q psy10669        248 ---TDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT-------GISLA  287 (337)
Q Consensus       248 ---t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~-------girig  287 (337)
                         ...+++++.+..    ..++.+.|.+.||.+....       .+||+
T Consensus       311 ~~~~~~~~~~~~~~~----~~~~~~~l~~~gi~v~~g~~~~~~~~~iRis  356 (385)
T 2bkw_A          311 SNMSAHGLTAVYVAD----PPDVIAFLKSHGVVIAGGIHKDIGPKYIRIG  356 (385)
T ss_dssp             STTBCSSCEEEECSC----HHHHHHHHHHTTEECBCCCCTTTGGGEEEEC
T ss_pred             ccccCCceEEEecCC----HHHHHHHHHHCCeEEeCCCCcccCCCEEEEE
Confidence               246778887753    5677888888899987522       57777

>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}

Probab=99.30  E-value=2.7e-10  Score=108.07  Aligned_cols=244  Identities=14%  Similarity=0.066  Sum_probs=150.4

Q ss_pred             cccceeeeccCCC--CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcC--CCCCCCcceeecCC
Q psy10669         29 QINGIELIASENF--TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFN--LDPEQWGCNVQPYS  104 (337)
Q Consensus        29 q~~~i~l~asen~--~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg--~~~~~~~~~v~~~S  104 (337)
                      .+..|.|...++-  .+|.+.+++...+... ..+      |.......+++....+.+.+.+|  .+.    .++.+++
T Consensus        28 g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~------y~~~~~~~~l~~~la~~~~~~~g~~~~~----~~v~~~~   96 (370)
T 2z61_A           28 GKKVIHLEIGEPDFNTPKPIVDEGIKSLKEG-KTH------YTDSRGILELREKISELYKDKYKADIIP----DNIIITG   96 (370)
T ss_dssp             TCCCEECCCCSCSSCCCHHHHHHHHHHHHTT-CCS------CCCTTCCHHHHHHHHHHHHHHSSCCCCG----GGEEEES
T ss_pred             CCCEEEccCCCCCCCCCHHHHHHHHHHHHcC-ccC------CCCCCCCHHHHHHHHHHHHHHhCCCCCh----hhEEECC
Confidence            3456777666664  3789999998765431 111      22122234555333334444444  332    2466666


Q ss_pred             C-chhHHHHHHhhCCc---------------------------------cc----c-cccEEEEc-Ccc-cccccChHHH
Q psy10669        105 G-SPANFAVCEKALPT---------------------------------NN----A-RFDFLSSG-TTC-YSRCLDYARF  143 (337)
Q Consensus       105 g-t~AN~~v~~aLl~~---------------------------------~~----a-~pklII~~-~S~-~~~~~d~~~l  143 (337)
                      | ++|+..++.+++++                                 .+    . ++++|++. +++ .+...|.+ |
T Consensus        97 g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~-l  175 (370)
T 2z61_A           97 GSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNFIRFLGAKPVFCDFTVESLEEALSDKTKAIIINSPSNPLGEVIDRE-I  175 (370)
T ss_dssp             SHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEECSSHHHHHHHCCSSEEEEEEESSCTTTCCCCCHH-H
T ss_pred             ChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEeCCCHHHHHHhcccCceEEEEcCCCCCcCcccCHH-H
Confidence            6 78998888988764                                 00    0 25666664 333 36788888 9


Q ss_pred             HHHhhhcCCeEEEeccccccccce----------------eeeec-c----CC---chhhh--hHHHHHhhccCCCCCCC
Q psy10669        144 RQICDETDSIMFADMSHISGLIAG----------------VKGVT-K----TG---EKILY--DYEEKINNAVFPSLQGG  197 (337)
Q Consensus       144 ~eia~~~ga~l~vD~AH~~Gli~g----------------~~~T~-~----~G---g~i~~--~l~~~i~~~~~p~~~g~  197 (337)
                      .++|+++|+++++|++|..+...+                +.++. |    .|   |+++.  ++.+.+.....+. .++
T Consensus       176 ~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~-~~~  254 (370)
T 2z61_A          176 YEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSKLYAMTGWRIGYVISNDEIIEAILKLQQNL-FIS  254 (370)
T ss_dssp             HHHHHHHCSEEEEECTTTTCBSSSCCCCGGGTCTTCSSEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHHHH-TSS
T ss_pred             HHHHHHcCCEEEEEcchhhcccCCCCcCHHHccCCCCcEEEEecChhccCCccceEEEEEECHHHHHHHHHHHhhc-ccC
Confidence            999999999999999998765421                12332 2    12   56554  4666555432222 235


Q ss_pred             CcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHh-hcCc
Q psy10669        198 PHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLE-EIAI  276 (337)
Q Consensus       198 ~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~-~~gI  276 (337)
                      ++++..+++..++..+.....++.++++.++.++|.+.|.+.|+++..+ ..+..+++++..   +..++.+.|. +.||
T Consensus       255 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~~~~~---~~~~~~~~l~~~~gi  330 (370)
T 2z61_A          255 APTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDFGWEVNNP-IGAYYVFPNIGE---DGREFAYKLLKEKFV  330 (370)
T ss_dssp             SCHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCBCCCC-CBTTEECCBCSS---CHHHHHHHHHHHHCE
T ss_pred             CCHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHcCCeecCC-CcceEEEEecCC---CHHHHHHHHHHhCCE
Confidence            6677777766666441123446778889999999999999989887642 234556666654   5677777775 6899


Q ss_pred             eeccCc--------ccchhhh
Q psy10669        277 ACNKNT--------GISLAAE  289 (337)
Q Consensus       277 ~v~~~~--------girig~~  289 (337)
                      .+.+..        .+||+..
T Consensus       331 ~v~~g~~f~~~~~~~~Ri~~~  351 (370)
T 2z61_A          331 ALTPGIGFGSKGKNYIRISYA  351 (370)
T ss_dssp             ECEEGGGGCGGGSSBEEEECC
T ss_pred             EEeCchhhCCCCCCEEEEEEe
Confidence            987532        4677644

>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*

Probab=99.30  E-value=1.9e-10  Score=114.82  Aligned_cols=238  Identities=11%  Similarity=0.023  Sum_probs=151.4

Q ss_pred             CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCC-CCcce-eecCCCchhHHHHHHhhCC--
Q psy10669         43 SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPE-QWGCN-VQPYSGSPANFAVCEKALP--  118 (337)
Q Consensus        43 ~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~-~~~~~-v~~~Sgt~AN~~v~~aLl~--  118 (337)
                      ++.+.+++...+. .+...++..  +.......++|...++.++++||.+.+ ++ ++ +..++|+.||..++.++..  
T Consensus       109 ~~~~~~~~~~~~~-~~~~~~~~~--~~~~p~~~~le~~l~~~la~~~g~~~~~~~-v~~~~t~ggt~a~~~al~a~~~~g  184 (514)
T 3mad_A          109 DEHHIAFLNEVYA-LQSQSNPLH--PDLWPSTAKFEAEVVAMTAHMLGGDAAGGT-VCGTVTSGGTESLLLAMKTYRDWA  184 (514)
T ss_dssp             CHHHHHHHHHHHH-HHTTCCTTC--TTTCHHHHHHHHHHHHHHHHHTTGGGGTSC-CEEEEESSHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHH-HHhhcCCcc--cccChHHHHHHHHHHHHHHHHcCCCCccCC-cceEEcCcHHHHHHHHHHHHHHHh
Confidence            4666555554432 222222222  222334567887777899999998720 12 22 4445558899888887631  


Q ss_pred             --------c---------------------------------------c--cc-cccEEEEcCcc--cccccChHHHHHH
Q psy10669        119 --------T---------------------------------------N--NA-RFDFLSSGTTC--YSRCLDYARFRQI  146 (337)
Q Consensus       119 --------~---------------------------------------~--~a-~pklII~~~S~--~~~~~d~~~l~ei  146 (337)
                              +                                       +  +. ++++|++....  .+...|+++|.+|
T Consensus       185 ~~~~g~~~d~Vi~~~~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l  264 (514)
T 3mad_A          185 RATKGITAPEAVVPVSAHAAFDKAAQYFGIKLVRTPLDADYRADVAAMREAITPNTVVVAGSAPGYPHGVVDPIPEIAAL  264 (514)
T ss_dssp             HHHHCCSSCEEEEETTSCTHHHHHHHHHTCEEEEECBCTTSCBCHHHHHHHCCTTEEEEEEETTCTTTCCCCCHHHHHHH
T ss_pred             hhhcCCCCCeEEEeCccchHHHHHHHHcCCeeEEeeeCCCCCCCHHHHHHHhccCCEEEEEeCCCCCCccccCHHHHHHH
Confidence                    1                                       0  01 26777776433  4688999999999


Q ss_pred             hhhcCCeEEEeccccccccc-----------------e---eeeeccC-------Cchhhh--hHHHHHh----------
Q psy10669        147 CDETDSIMFADMSHISGLIA-----------------G---VKGVTKT-------GEKILY--DYEEKIN----------  187 (337)
Q Consensus       147 a~~~ga~l~vD~AH~~Gli~-----------------g---~~~T~~~-------Gg~i~~--~l~~~i~----------  187 (337)
                      |+++|++|++|++|+.+++.                 +   ++++.+|       .|+++.  +......          
T Consensus       265 a~~~~i~livDea~~~~~~~~~~~~g~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  344 (514)
T 3mad_A          265 AAEHGIGCHVDACLGGFILPWAERLGYPVPPFDFRLEGVTSVSADTHKYGYGAKGTSVILYRRPDLLHYQYFIAADWPGG  344 (514)
T ss_dssp             HHHHTCEEEEECTTTTTTHHHHHHTTCCCCCCSTTSTTCCEEEECTTTTTCCCSSCEEEEESSHHHHTTTCEEESSCTTC
T ss_pred             HHHhCCeEEEecccccccchhHHhcCCCCCcccccCCCCcEEEECchhccCCCCCeEEEEEeCHHHhccccccccccCCC
Confidence            99999999999999865441                 1   2223222       134433  2211111          


Q ss_pred             hccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCCCcchHH
Q psy10669        188 NAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKNKLTGSK  266 (337)
Q Consensus       188 ~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~~~~~~~  266 (337)
                      ....+.+.|+.....++++.+++..+....+++..+++.+++++|.+.|.+. |++++..  ...++.+  ...+.+..+
T Consensus       345 ~~~~~~~~gs~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~--~~~~~~~--~~~~~~~~~  420 (514)
T 3mad_A          345 LYFSPTFAGSRPGALSATAWAAMLSLGEEGYLDATRRILQAADRLKAGVRAIPSLKILGD--PLWVIAV--ASDELNIYQ  420 (514)
T ss_dssp             SEEESSSCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCEESSC--CSSEEEE--ECSSSCHHH
T ss_pred             cccCCccCCCCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEeCC--CeEEEEE--eCCCCCHHH
Confidence            1112445677888888888888877765667899999999999999999985 8998762  2334444  445567888


Q ss_pred             HHHHHhhcCceeccCc---ccchhh
Q psy10669        267 VELVLEEIAIACNKNT---GISLAA  288 (337)
Q Consensus       267 ~~~~L~~~gI~v~~~~---girig~  288 (337)
                      +.+.|.+.||.+....   .+|+..
T Consensus       421 l~~~L~~~Gi~v~g~~~~~~~Ri~~  445 (514)
T 3mad_A          421 VMEEMAGRGWRLNGLHRPPAFHVAL  445 (514)
T ss_dssp             HHHHHHTTTCBCEEETTTTEEEEEC
T ss_pred             HHHHHHhcCCEeccCCCCCeEEEEE
Confidence            8999998899884322   577754

>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}

Probab=99.27  E-value=1.5e-10  Score=110.95  Aligned_cols=197  Identities=10%  Similarity=0.082  Sum_probs=131.1

Q ss_pred             HHHHHHHHHHHhhcCCCCCCCcceeec-CCCchhHHHHHHhhCCc----------------------------------c
Q psy10669         76 EIEIVAQQRSLKAFNLDPEQWGCNVQP-YSGSPANFAVCEKALPT----------------------------------N  120 (337)
Q Consensus        76 ~lE~~~~~~~a~lfg~~~~~~~~~v~~-~Sgt~AN~~v~~aLl~~----------------------------------~  120 (337)
                      ++...++++++++||++.     .+.+ .|||.||.+++..+.+.                                  .
T Consensus        35 ~~~~~~~~~l~~~~~~~~-----~v~~~~sgt~a~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  109 (379)
T 3ke3_A           35 EVMNDLLSNLKTVYNAEA-----AVIIPGSGTYGMEAVARQLTIDEDCLIIRNGWFSYRWTQILEKGKFAKSSTVLTAER  109 (379)
T ss_dssp             HHHHHHHHHHHHHHTCSE-----EEEEESCHHHHHHHHHHHHCTTCEEEEEECSHHHHHHHHHHHHHCCSSEEEEEECEE
T ss_pred             HHHHHHHHHHHHHhCCCC-----EEEEcCChhHHHHHHHHhCCCCCeEEEEeCCchhHHHHHHHHHhCCCCceEEEeccc
Confidence            455556789999999874     4555 46688988777665321                                  0


Q ss_pred             -----------c-----------c-cccEEEEcC--cccccccC---hHHHHHHhhhcCCeEEEeccccccccc------
Q psy10669        121 -----------N-----------A-RFDFLSSGT--TCYSRCLD---YARFRQICDETDSIMFADMSHISGLIA------  166 (337)
Q Consensus       121 -----------~-----------a-~pklII~~~--S~~~~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~------  166 (337)
                                 .           . +|++|++.+  +..+...|   +++|.++|+++|+++++|++|+ |...      
T Consensus       110 ~g~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~-g~~~~~~~~~  188 (379)
T 3ke3_A          110 TEDTEAPKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS-GCVWLDMKEL  188 (379)
T ss_dssp             SSCCSSCCCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC-TTCCCCHHHH
T ss_pred             cccccccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc-CCcccccccc
Confidence                       0           0 267777653  33578888   8999999999999999999998 7554      


Q ss_pred             e---eeeeccC------C-chhhh--hHHHHHhh-ccCCC--------------------CCCCCcHHHHHHHHHHHHHH
Q psy10669        167 G---VKGVTKT------G-EKILY--DYEEKINN-AVFPS--------------------LQGGPHNHAIGAIATAMLQA  213 (337)
Q Consensus       167 g---~~~T~~~------G-g~i~~--~l~~~i~~-~~~p~--------------------~~g~~~~~~iaala~a~~e~  213 (337)
                      +   ++++.+|      | |++..  ++.+.+.+ ...+.                    ..+|++++.++|+..++..+
T Consensus       189 ~~d~~~~s~~K~l~~~~g~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t~~~~~~~a~~aal~~~  268 (379)
T 3ke3_A          189 GIDVLISAPQKGWSSTPCAGLVMLSAAAIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYHATMPTDSLRQFRDAILEA  268 (379)
T ss_dssp             TCSEEEECTTTTTCSCCCEEEEEECHHHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSCCCHHHHHHHHHHHHHH
T ss_pred             CCCEEEecchhhcCCCCceEEEEECHHHHHhhhcCCCCceeecHHHHHHHHHhhhccCCCCCCCCCHHHHHHHHHHHHHH
Confidence            1   2333322      3 45543  45555543 11111                    13589999999999999888


Q ss_pred             hchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCC-CCCeEEEEEecCCCcchHHHHHHHhhcCceecc
Q psy10669        214 QSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGG-TDVHLILIDLRKNKLTGSKVELVLEEIAIACNK  280 (337)
Q Consensus       214 ~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~-t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~  280 (337)
                      .+..+++++++..+++++|++.|.+.|+++.... ..+++++... ..+... ...+.|.+.||.+..
T Consensus       269 ~~~g~~~~~~~~~~l~~~l~~~l~~~g~~~~~~~~~~~~~i~~~~-~~~~~~-~~~~~L~~~Gi~v~~  334 (379)
T 3ke3_A          269 KEIGFDILRDAQWELGNRVRKVLTDKGIESVAAEGFEAPGVVVSY-TERDDM-HKGSAFAEAGLQIAA  334 (379)
T ss_dssp             HHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSBCTTCBCSSEEEEE-CSCHHH-HSSHHHHHTTCCCEE
T ss_pred             HHhcHHHHHHHHHHHHHHHHHHHHHcCCEecCCccccCceEEEEc-cCCcch-HHHHHHHHCCeEEeC
Confidence            6544689999999999999999999999987632 2234333222 222111 225677888998764

>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0

Probab=99.27  E-value=6.4e-10  Score=104.72  Aligned_cols=224  Identities=13%  Similarity=0.075  Sum_probs=147.2

Q ss_pred             ccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-c
Q psy10669         30 INGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-S  106 (337)
Q Consensus        30 ~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t  106 (337)
                      +..|.|-..+|..  +|.|.+++...+.. + .+++..       ...+++    +.++++++.+..    ++.+++| +
T Consensus        26 ~~~idl~~~~~~~~~~~~v~~a~~~~~~~-~-~~y~~~-------~~~~l~----~~la~~~~~~~~----~i~~~~g~t   88 (361)
T 3ftb_A           26 RELLDYSSNINPLGIPKSFLNNIDEGIKN-L-GVYPDV-------NYRRLN----KSIENYLKLKDI----GIVLGNGAS   88 (361)
T ss_dssp             --CEETTCCCCTTCSCHHHHTTHHHHHHG-G-GSCCCT-------TCHHHH----HHHHHHHTCCSC----EEEEESSHH
T ss_pred             CCEEEecCCCCCCCCCHHHHHHHHHHHHH-h-cCCCCc-------cHHHHH----HHHHHHhCCCcc----eEEEcCCHH
Confidence            4567777777876  89999999876543 2 233321       123444    678899998652    5777666 6


Q ss_pred             hhHHHHHHhhCCc-----------------------------c-------cc---c-ccEEEEcCccc--ccccC---hH
Q psy10669        107 PANFAVCEKALPT-----------------------------N-------NA---R-FDFLSSGTTCY--SRCLD---YA  141 (337)
Q Consensus       107 ~AN~~v~~aLl~~-----------------------------~-------~a---~-pklII~~~S~~--~~~~d---~~  141 (337)
                      .|+..++.++ +.                             .       +.   + +++|++..-.+  +...+   ++
T Consensus        89 ~al~~~~~~~-d~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~~~~v~i~~p~nptG~~~~~~~l~  167 (361)
T 3ftb_A           89 EIIELSISLF-EKILIIVPSYAEYEINAKKHGVSVVFSYLDENMCIDYEDIISKIDDVDSVIIGNPNNPNGGLINKEKFI  167 (361)
T ss_dssp             HHHHHHHTTC-SEEEEEESCCTHHHHHHHHTTCEEEEEECCTTSCCCHHHHHHHTTTCSEEEEETTBTTTTBCCCHHHHH
T ss_pred             HHHHHHHHHc-CcEEEecCChHHHHHHHHHcCCeEEEeecCcccCCCHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHH
Confidence            7888877776 32                             0       00   1 57777653333  45555   44


Q ss_pred             HHHHHhhhcCCeEEEecccccccc-------c--------eeeeec-c-------CCchhh-h--hHHHHHhhccCCCCC
Q psy10669        142 RFRQICDETDSIMFADMSHISGLI-------A--------GVKGVT-K-------TGEKIL-Y--DYEEKINNAVFPSLQ  195 (337)
Q Consensus       142 ~l~eia~~~ga~l~vD~AH~~Gli-------~--------g~~~T~-~-------~Gg~i~-~--~l~~~i~~~~~p~~~  195 (337)
                      +|.++|+++|+++++|++|.-+..       .        .++++. |       ..|+++ .  ++.+.+.....+   
T Consensus       168 ~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~~~~~~~~~~~~~~---  244 (361)
T 3ftb_A          168 HVLKLAEEKKKTIIIDEAFIEFTGDPSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNKEIAAKIKAKQNP---  244 (361)
T ss_dssp             HHHHHHHHHTCEEEEECSSGGGTCCTTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESCHHHHHHHHTTSCT---
T ss_pred             HHHHHhhhcCCEEEEECcchhhcCCcccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCCHHHHHHHHhhCCC---
Confidence            566777899999999999974333       1        122332 2       126655 4  577777655333   


Q ss_pred             CCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCE-EecCCCCCeEEEEEecCCCcchHHHHHHHhh
Q psy10669        196 GGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYH-VVTGGTDVHLILIDLRKNKLTGSKVELVLEE  273 (337)
Q Consensus       196 g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~-v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~  273 (337)
                      .++++...+++..++.+  ....++.++++.++.++|.+.|.+. |++ +..  .+...+++.+..  .+..++.+.|.+
T Consensus       245 ~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~l~~~l~~  318 (361)
T 3ftb_A          245 WNINCFAEMAAINCLKD--TNYIEESLLWIKKERKRFIEELNKIGFIKRVFS--PHANFVLCRLEN--ISGEKLYDSLLK  318 (361)
T ss_dssp             TCSCHHHHHHHHHTSSC--HHHHHHHHHHHHHHHHHHHHHHHHSSSEEEEEC--CSSSEEEEEESS--SCHHHHHHHHHT
T ss_pred             CCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHhCCCCceecC--CCCeEEEEEcCC--CCHHHHHHHHHH
Confidence            36777888777777654  2345678889999999999999986 787 664  445567777765  467888888888


Q ss_pred             cCceecc
Q psy10669        274 IAIACNK  280 (337)
Q Consensus       274 ~gI~v~~  280 (337)
                      .||.+.+
T Consensus       319 ~gi~v~~  325 (361)
T 3ftb_A          319 EDIVIRR  325 (361)
T ss_dssp             TTEECEE
T ss_pred             CCeEEee
Confidence            8999876

>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}

Probab=99.27  E-value=4.2e-10  Score=106.62  Aligned_cols=236  Identities=17%  Similarity=0.206  Sum_probs=146.3

Q ss_pred             cccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcC--CCCCCCcceeecCC
Q psy10669         29 QINGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFN--LDPEQWGCNVQPYS  104 (337)
Q Consensus        29 q~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg--~~~~~~~~~v~~~S  104 (337)
                      .+..|.|...+|..  +|.|.+++...+... ..+++.    .|    .+++....+.+.+.+|  .+.    .++.+++
T Consensus        22 g~~~idl~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~----~~----~~lr~~la~~~~~~~~~~~~~----~~i~~t~   88 (377)
T 3fdb_A           22 GQGVLPLWVAESDFSTCPAVLQAITDAVQRE-AFGYQP----DG----SLLSQATAEFYADRYGYQARP----EWIFPIP   88 (377)
T ss_dssp             CTTSEECCSSCCCSCCCHHHHHHHHHHHHTT-CCSSCC----SS----CCHHHHHHHHHHHHHCCCCCG----GGEEEES
T ss_pred             CCCeeeecccCCCCCCCHHHHHHHHHHHHcC-CCCCCC----CC----HHHHHHHHHHHHHHhCCCCCH----HHEEEeC
Confidence            34567777777654  899999998765531 122222    12    2333222234444444  333    2566766


Q ss_pred             C-chhHHHHHHhhCCc------------------------------c-------cc-----cccEEEEcCccc--ccccC
Q psy10669        105 G-SPANFAVCEKALPT------------------------------N-------NA-----RFDFLSSGTTCY--SRCLD  139 (337)
Q Consensus       105 g-t~AN~~v~~aLl~~------------------------------~-------~a-----~pklII~~~S~~--~~~~d  139 (337)
                      | +.|+..++.+++++                              .       +.     ++++|++....+  +...+
T Consensus        89 g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~  168 (377)
T 3fdb_A           89 DVVRGLYIAIDHFTPAQSKVIVPTPAYPPFFHLLSATQREGIFIDATGGINLHDVEKGFQAGARSILLCNPYNPLGMVFA  168 (377)
T ss_dssp             CHHHHHHHHHHHHSCTTCCEEEEESCCTHHHHHHHHHTCCEEEEECTTSCCHHHHHHHHHTTCCEEEEESSBTTTTBCCC
T ss_pred             ChHHHHHHHHHHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEEccCCCCCCHHHHHHHhccCCCEEEEeCCCCCCCCCCC
Confidence            6 78888888988754                              0       00     156666653333  45554


Q ss_pred             ---hHHHHHHhhhcCCeEEEeccccccccce-----------------eeeec-c-------CCch-hhh--hHHHHHhh
Q psy10669        140 ---YARFRQICDETDSIMFADMSHISGLIAG-----------------VKGVT-K-------TGEK-ILY--DYEEKINN  188 (337)
Q Consensus       140 ---~~~l~eia~~~ga~l~vD~AH~~Gli~g-----------------~~~T~-~-------~Gg~-i~~--~l~~~i~~  188 (337)
                         +++|.++|+++|+++++|++|......+                 +.++. |       ..|+ +..  ++.+.+..
T Consensus       169 ~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~  248 (377)
T 3fdb_A          169 PEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSKAWNIAGLKCAQIIFSNPSDAEHWQQ  248 (377)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHEEEEECSTTTTTCGGGCCEEEECCSHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcEEEEEeChHhccCcchhheEEEeCCHHHHHHHHH
Confidence               4556677999999999999998732211                 12232 2       1253 332  46666654


Q ss_pred             ccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCEEecCCCCCeEEEEEecCCCcchHH
Q psy10669        189 AVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYHVVTGGTDVHLILIDLRKNKLTGSK  266 (337)
Q Consensus       189 ~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~v~~~~t~~h~v~V~~~~~~~~~~~  266 (337)
                      . .+....+++++..++...++.+. ....++.++++.++.++|.+.|.+.  |+++..+ ..+..+++++...+.+...
T Consensus       249 ~-~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  325 (377)
T 3fdb_A          249 L-SPVIKDGASTLGLIAAEAAYRYG-TDFLNQEVAYLKNNHDFLLHEIPKRIPGAKITPM-QATYLMWIDFRDTTIEGSP  325 (377)
T ss_dssp             S-CHHHHCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHSTTCEECCC-SBCSEEEEECTTSCCCSCH
T ss_pred             H-HHhhcCCCCHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecC-CeeEEEEEECcccCCCHHH
Confidence            3 23334577888888877777664 2345788899999999999999885  9988752 3344557888765545444


Q ss_pred             HHHHHhhcCceecc
Q psy10669        267 VELVLEEIAIACNK  280 (337)
Q Consensus       267 ~~~~L~~~gI~v~~  280 (337)
                      +...++++||.+.+
T Consensus       326 ~~~l~~~~gi~v~~  339 (377)
T 3fdb_A          326 SEFFIEKAKVAMND  339 (377)
T ss_dssp             HHHHHHHHCEECEE
T ss_pred             HHHHHHhCCEEecC
Confidence            55666677999976

>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*

Probab=99.27  E-value=7.3e-11  Score=113.99  Aligned_cols=229  Identities=12%  Similarity=0.039  Sum_probs=138.2

Q ss_pred             ccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhH
Q psy10669         30 INGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPAN  109 (337)
Q Consensus        30 ~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN  109 (337)
                      .-.....++.+++.|.+.+++.. +.+. ..++.-.|+  ++...+++|    +++++++|.+.     .+.++||+.||
T Consensus        27 ~~~~p~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~r~--~~~~~~~l~----~~la~~~g~~~-----~i~~~sG~~a~   93 (398)
T 1gc0_A           27 ALVPPVYQTATFTFPTVEYGAAC-FAGE-QAGHFYSRI--SNPTLNLLE----ARMASLEGGEA-----GLALASGMGAI   93 (398)
T ss_dssp             BSSCCBCCCSCBCCC-------------------------CCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHH
T ss_pred             CcCCCccCCCccccCCHHHHHHh-hcCC-cCCCcccCC--CChHHHHHH----HHHHHHhCCCc-----EEEECCHHHHH
Confidence            44677999999999999888752 2322 122222222  344455666    58889999874     68999999999


Q ss_pred             HHHHHhhCCc--------------------------------------cc--c---cccEEEEcCcc--cccccChHHHH
Q psy10669        110 FAVCEKALPT--------------------------------------NN--A---RFDFLSSGTTC--YSRCLDYARFR  144 (337)
Q Consensus       110 ~~v~~aLl~~--------------------------------------~~--a---~pklII~~~S~--~~~~~d~~~l~  144 (337)
                      ..++.+++++                                      .+  +   ++++|++...+  .+...|+++|.
T Consensus        94 ~~~l~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~  173 (398)
T 1gc0_A           94 TSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDMADLQALEAAMTPATRVIYFESPANPNMHMADIAGVA  173 (398)
T ss_dssp             HHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEECTTCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHH
T ss_pred             HHHHHHHhcCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCCCCeEEEEECCCCCCcccccHHHHH
Confidence            9888988654                                      00  0   26788876333  35788999999


Q ss_pred             HHhhhcCCeEEEeccccccccc--------eeeee-cc-----C---Cchhhh--h-HHHHHhhccCCC-CCCCCcHHHH
Q psy10669        145 QICDETDSIMFADMSHISGLIA--------GVKGV-TK-----T---GEKILY--D-YEEKINNAVFPS-LQGGPHNHAI  203 (337)
Q Consensus       145 eia~~~ga~l~vD~AH~~Gli~--------g~~~T-~~-----~---Gg~i~~--~-l~~~i~~~~~p~-~~g~~~~~~i  203 (337)
                      ++|+++|+++++|++|..|...        .++.+ +|     .   ||+++.  + +.+.+..... + ..++.++...
T Consensus       174 ~l~~~~~~~li~D~~~~~~~~~~~~~~~~d~~~~S~sK~~~~~~~~~~G~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  252 (398)
T 1gc0_A          174 KIARKHGATVVVDNTYCTPYLQRPLELGADLVVHSATKYLSGHGDITAGIVVGSQALVDRIRLQGLK-DMTGAVLSPHDA  252 (398)
T ss_dssp             HHHGGGTCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECHHHHHHHHHTHHH-HHTCCCCCHHHH
T ss_pred             HHHHHcCCEEEEECCCcccccCCchhhCceEEEECCccccCCCCCCeEEEEEEChHHHHHHHHHHhh-ccCCCCCCHHHH
Confidence            9999999999999999988754        12223 22     1   566654  3 3334544322 2 2345565555


Q ss_pred             HHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC---------------CEEecC--CCCCeEEEEEecCCCcchHH
Q psy10669        204 GAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG---------------YHVVTG--GTDVHLILIDLRKNKLTGSK  266 (337)
Q Consensus       204 aala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G---------------~~v~~~--~t~~h~v~V~~~~~~~~~~~  266 (337)
                      ++...++.     ..+.+.++..+|++.+++.|.+.+               +++...  .+..+++.+.+..   ....
T Consensus       253 ~~~~~~l~-----~~~~~~~~~~~~~~~l~~~L~~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~  324 (398)
T 1gc0_A          253 ALLMRGIK-----TLNLRMDRHCANAQVLAEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKG---GIGA  324 (398)
T ss_dssp             HHHHHHHT-----THHHHHHHHHHHHHHHHHHHHTCTTEEEEEEC----------------CCTTEEEEEETT---HHHH
T ss_pred             HHHHhccc-----hHHHHHHHHHHHHHHHHHHHhcCCCeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEECC---CHHH
Confidence            44444432     345778889999999999998742               222221  1356777777642   2456


Q ss_pred             HHHHHhhcCceecc
Q psy10669        267 VELVLEEIAIACNK  280 (337)
Q Consensus       267 ~~~~L~~~gI~v~~  280 (337)
                      +.+.|++.||.+..
T Consensus       325 ~~~~l~~~~i~~~~  338 (398)
T 1gc0_A          325 GRRFMNALQLFSRA  338 (398)
T ss_dssp             HHHHHHHCSSSEEC
T ss_pred             HHHHHHhCCCceec
Confidence            78888888887754

>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}

Probab=99.27  E-value=1.4e-11  Score=117.27  Aligned_cols=217  Identities=10%  Similarity=0.063  Sum_probs=135.2

Q ss_pred             CCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhh-C
Q psy10669         39 ENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKA-L  117 (337)
Q Consensus        39 en~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aL-l  117 (337)
                      ...++|.+++++...+...+         |.......++|    +++++++|.++     .+.+.|||.||..++.++ +
T Consensus        12 ~~~~~~~~~~a~~~~~~~~~---------~~~~~~~~~l~----~~la~~~~~~~-----~i~~~sgt~al~~~l~~l~~   73 (373)
T 3frk_A           12 HDEIEYEIKFKFEEIYKRNW---------FILGDEDKKFE----QEFADYCNVNY-----CIGCGNGLDALHLILKGYDI   73 (373)
T ss_dssp             HHHHHHHHHHHHHHHHHHTC---------CSSSHHHHHHH----HHHHHHHTSSE-----EEEESCHHHHHHHHHHHTTC
T ss_pred             cCCCCHHHHHHHHHHHHCCC---------ccCCchHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHHHcCC
Confidence            33457888888876654321         22233445565    68899999874     577788899998888998 6


Q ss_pred             Cc----------------------------------------ccc-----cccEEEEcCcccccccChHHHHHHhhhcCC
Q psy10669        118 PT----------------------------------------NNA-----RFDFLSSGTTCYSRCLDYARFRQICDETDS  152 (337)
Q Consensus       118 ~~----------------------------------------~~a-----~pklII~~~S~~~~~~d~~~l~eia~~~ga  152 (337)
                      ++                                        .+.     ++++|++. ...+...|+++|.++|+++|+
T Consensus        74 ~~gd~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~-n~~G~~~~l~~i~~l~~~~~~  152 (373)
T 3frk_A           74 GFGDEVIVPSNTFIATALAVSYTGAKPIFVEPDIRTYNIDPSLIESAITEKTKAIIAV-HLYGQPADMDEIKRIAKKYNL  152 (373)
T ss_dssp             CTTCEEEEETTSCTHHHHHHHHHSCEEEEECEETTTTEECGGGTGGGCCTTEEEEEEE-CCTTCCCCHHHHHHHHHHHTC
T ss_pred             CCcCEEEECCCCcHHHHHHHHHcCCEEEEEeccccccCcCHHHHHHhcCCCCeEEEEE-CCCcCcccHHHHHHHHHHcCC
Confidence            54                                        111     26777764 356788999999999999999


Q ss_pred             eEEEeccccccccc----------eeeee--c-c------CCchhhh---hHHHHHhhccCCCC--------CCCCcHHH
Q psy10669        153 IMFADMSHISGLIA----------GVKGV--T-K------TGEKILY---DYEEKINNAVFPSL--------QGGPHNHA  202 (337)
Q Consensus       153 ~l~vD~AH~~Gli~----------g~~~T--~-~------~Gg~i~~---~l~~~i~~~~~p~~--------~g~~~~~~  202 (337)
                      ++++|++|+.|..-          .++++  . |      .||++++   ++.+.+......+.        .|..  ..
T Consensus       153 ~li~D~a~~~g~~~~~~~~~~~~d~~~~S~~~~K~l~~~g~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~--~~  230 (373)
T 3frk_A          153 KLIEDAAQAHGSLYKGMKVGSLGDAAGFSFYPAKNLGSLGDGGAVVTNDKDLAEKIKALSNYGSEKKYHHIYKGFN--SR  230 (373)
T ss_dssp             EEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCCSSSCEEEEESCHHHHHHHHHHHBTTCSBTTBCCSCCCB--CC
T ss_pred             EEEEECCcccCCEECCEeccccccEEEEeCcCCCccCccceeEEEEeCCHHHHHHHHHHHhcCcccCCcccccccc--CC
Confidence            99999999987642          12222  1 2      2566664   35554443211111        1100  01


Q ss_pred             HHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCC----CCCeEEEEEecCCCcchHHHHHHHhhcCcee
Q psy10669        203 IGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGG----TDVHLILIDLRKNKLTGSKVELVLEEIAIAC  278 (337)
Q Consensus       203 iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~----t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v  278 (337)
                      +.++..++.......++++.++..++++++.+.|.+.++.+....    .-.+.+++...    +..++.+.|.+.||.+
T Consensus       231 ~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~L~~~gI~v  306 (373)
T 3frk_A          231 LDELQAGFLRVKLKYLDKWNEERRKIAQKYIAGINNPNVIIPVEADYAKHVWYTFVIRSE----KRDELQKYLNNNGIGT  306 (373)
T ss_dssp             CCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHCCCTTEECCCCCTTEECCCSSEEEEES----SHHHHHHHHHHTTBCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEeccCCCCCceeeEEEEEEeC----CHHHHHHHHHHCCCCc
Confidence            112222222222234567888899999999999988775553211    11244444432    5778889999889998


Q ss_pred             cc
Q psy10669        279 NK  280 (337)
Q Consensus       279 ~~  280 (337)
                      +.
T Consensus       307 ~~  308 (373)
T 3frk_A          307 LI  308 (373)
T ss_dssp             BC
T ss_pred             cc
Confidence            85

>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}

Probab=99.27  E-value=4.6e-10  Score=108.28  Aligned_cols=248  Identities=11%  Similarity=0.105  Sum_probs=146.1

Q ss_pred             ccceeeeccCCC--CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCC-CCCcceeecCCC-
Q psy10669         30 INGIELIASENF--TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDP-EQWGCNVQPYSG-  105 (337)
Q Consensus        30 ~~~i~l~asen~--~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~-~~~~~~v~~~Sg-  105 (337)
                      +..|.|...++-  .+|.|.+++...+......+      |.......+++....+.+.+.+|.+. ++  .+|.+++| 
T Consensus        37 ~~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~l~~~ia~~~~~~~g~~~~~~--~~v~~t~g~  108 (412)
T 2x5d_A           37 EDIIDLSMGNPDGPTPPHIVEKLCTVAQREDTHG------YSTSRGIPRLRRAISHWYRDRYDVQIDPE--SEAIVTIGS  108 (412)
T ss_dssp             CCCEECSSCCCCSCCCHHHHHHHHHTC---------------CTTCCHHHHHHHHHHHHHHHCCCCCTT--TSEEEESCH
T ss_pred             CCEEecCCCCCCCCCCHHHHHHHHHHHhCCCCCC------CCCCCCcHHHHHHHHHHHHHHhCCCCCCC--cCEEEcCCh
Confidence            345777666664  38999999976543210111      21111224555333334444448521 10  04666555 


Q ss_pred             chhHHHHHHhhCCc--------------------------------c---------c--c---cccEEEEcCccc--ccc
Q psy10669        106 SPANFAVCEKALPT--------------------------------N---------N--A---RFDFLSSGTTCY--SRC  137 (337)
Q Consensus       106 t~AN~~v~~aLl~~--------------------------------~---------~--a---~pklII~~~S~~--~~~  137 (337)
                      +.|+..++.+++++                                .         +  +   ++++|++..-.+  +..
T Consensus       109 ~~a~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~l~~p~nptG~~  188 (412)
T 2x5d_A          109 KEGLAHLMLATLDHGDTILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNELERAIRESIPKPRMMILGFPSNPTAQC  188 (412)
T ss_dssp             HHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHHTCEEEEEECSTTSCHHHHHHHHHHTEESCCSEEEEESSCTTTCCC
T ss_pred             HHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHhcccCceEEEECCCCCCCCCc
Confidence            78998888988754                                1         0  0   267777742222  344


Q ss_pred             cC---hHHHHHHhhhcCCeEEEeccccccccc-----------------eeeeec-c----CC---chhhh--hHHHHHh
Q psy10669        138 LD---YARFRQICDETDSIMFADMSHISGLIA-----------------GVKGVT-K----TG---EKILY--DYEEKIN  187 (337)
Q Consensus       138 ~d---~~~l~eia~~~ga~l~vD~AH~~Gli~-----------------g~~~T~-~----~G---g~i~~--~l~~~i~  187 (337)
                      .+   +++|.++|+++|+++++|++|..+...                 .+++|. |    .|   |+++.  ++.+.+.
T Consensus       189 ~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~  268 (412)
T 2x5d_A          189 VELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVGNPELVSALA  268 (412)
T ss_dssp             CCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CCSCTTSCCEEEEECHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCccccCCcccceEEEEcCHHHHHHHH
Confidence            44   567888999999999999999875431                 112332 2    13   56654  4655554


Q ss_pred             hccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCc---ch
Q psy10669        188 NAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKL---TG  264 (337)
Q Consensus       188 ~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~---~~  264 (337)
                      .... ....+++++..+++..++... ....++.++++.++.++|.+.|.+.|+++..+ ..+..+++++.. ++   +.
T Consensus       269 ~~~~-~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~g~~~~~~~~~-~~~~~~~  344 (412)
T 2x5d_A          269 RIKS-YHDYGTFTPLQVAAIAALEGD-QQCVRDIARQYQQRRDVLVKGLREAGWMVENP-KASMYVWAKIPE-PYAHLGS  344 (412)
T ss_dssp             HHHH-HHCCCCCHHHHHHHHHHHHSC-SHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCC-SBSSEEEEECCT-TTGGGCH
T ss_pred             HHHh-hhccCCCHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHCCCEecCC-CeeeEEEEEcCC-ccCCCCH
Confidence            3321 112356667777766666543 33457788899999999999999888887642 235567787743 33   46


Q ss_pred             HHHHHHH-hhcCceeccCc--------ccchhhh
Q psy10669        265 SKVELVL-EEIAIACNKNT--------GISLAAE  289 (337)
Q Consensus       265 ~~~~~~L-~~~gI~v~~~~--------girig~~  289 (337)
                      .++.+.| ++.||.+.+..        .|||+..
T Consensus       345 ~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~  378 (412)
T 2x5d_A          345 LEFAKKLLQDAKVSVSPGIGFGDYGDDHVRFALI  378 (412)
T ss_dssp             HHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECC
T ss_pred             HHHHHHHHHHCCEEEeCchhhCCCCCCeEEEEec
Confidence            6677776 45799997532        5777643

>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*

Probab=99.27  E-value=4.3e-10  Score=107.67  Aligned_cols=243  Identities=13%  Similarity=0.098  Sum_probs=155.1

Q ss_pred             cceeeeccCCC--CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcC--CCCCCCcceeecCCC-
Q psy10669         31 NGIELIASENF--TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFN--LDPEQWGCNVQPYSG-  105 (337)
Q Consensus        31 ~~i~l~asen~--~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg--~~~~~~~~~v~~~Sg-  105 (337)
                      ..|.|...++-  .+|.|.+++...+.+. ..+++     .+   ..+++....+.+.+.+|  .+.    .+|.+++| 
T Consensus        32 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~-----~~---~~~l~~~la~~l~~~~g~~~~~----~~v~~t~g~   98 (399)
T 1c7n_A           32 EVVPLSVADMEFKNPPELIEGLKKYLDET-VLGYT-----GP---TEEYKKTVKKWMKDRHQWDIQT----DWIINTAGV   98 (399)
T ss_dssp             TCCCCCSSSCSSCCCHHHHHHHHHHHHHC-CCSSB-----CC---CHHHHHHHHHHHHHHHCCCCCG----GGEEEESSH
T ss_pred             CceeeeecCCCCCCCHHHHHHHHHHHhcC-CCCCC-----CC---cHHHHHHHHHHHHHHhCCCCCh----hhEEEcCCH
Confidence            56777666663  3799999998765431 11221     12   34555443445555567  433    25777777 


Q ss_pred             chhHHHHHHhhCCc------------------------------c-------c-----------ccccEEEEcCccc--c
Q psy10669        106 SPANFAVCEKALPT------------------------------N-------N-----------ARFDFLSSGTTCY--S  135 (337)
Q Consensus       106 t~AN~~v~~aLl~~------------------------------~-------~-----------a~pklII~~~S~~--~  135 (337)
                      ++|+..++.+++++                              .       .           .++++|++..-.+  +
T Consensus        99 ~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG  178 (399)
T 1c7n_A           99 VPAVFNAVREFTKPGDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVG  178 (399)
T ss_dssp             HHHHHHHHHHHCCTTCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEEESSBTTTT
T ss_pred             HHHHHHHHHHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEecccccCCCCEEEcHHHHHHHhccCCCcEEEEcCCCCCCC
Confidence            78988888998654                              0       0           1257777643233  4


Q ss_pred             cccC---hHHHHHHhhhcCCeEEEeccccccccce------------------eeeec-c-------CCchhhh---hHH
Q psy10669        136 RCLD---YARFRQICDETDSIMFADMSHISGLIAG------------------VKGVT-K-------TGEKILY---DYE  183 (337)
Q Consensus       136 ~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~g------------------~~~T~-~-------~Gg~i~~---~l~  183 (337)
                      ...|   +++|.++|+++|++|++|++|..+...+                  +.+|. |       ..|+++.   ++.
T Consensus       179 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~  258 (399)
T 1c7n_A          179 RVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNPDIR  258 (399)
T ss_dssp             BCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHH
T ss_pred             cCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcCccccCcEEEEEeChhhccccchheEEEEECCHHHH
Confidence            6666   7888899999999999999998633210                  12232 2       1255553   366


Q ss_pred             HHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-C-CCEEecCCCCCeEEEEEecCCC
Q psy10669        184 EKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-R-GYHVVTGGTDVHLILIDLRKNK  261 (337)
Q Consensus       184 ~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~-G~~v~~~~t~~h~v~V~~~~~~  261 (337)
                      +.+.....+...+++++...+++..++.+. ....++.++++.++.++|.+.|.+ . |+++..+ ..+..+++++...+
T Consensus       259 ~~l~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~~~~~~~~~~~  336 (399)
T 1c7n_A          259 ERFTKSRDATSGMPFTTLGYKACEICYKEC-GKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAPLI-EGTYLQWIDFRALK  336 (399)
T ss_dssp             HHHHHHHHHTTCCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHCTTSBCCCC-SBSSEEEEECGGGC
T ss_pred             HHHHHHHhhcccCCCCHHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEecC-CceEEEEEEcccCC
Confidence            666654444434567777877777777653 234567788899999999999988 4 8877642 33445568886544


Q ss_pred             cchHHHHHHHh-hcCceeccCc--------ccchhh
Q psy10669        262 LTGSKVELVLE-EIAIACNKNT--------GISLAA  288 (337)
Q Consensus       262 ~~~~~~~~~L~-~~gI~v~~~~--------girig~  288 (337)
                      .+..++.+.|. +.||.+.+..        .|||+.
T Consensus       337 ~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~  372 (399)
T 1c7n_A          337 MDHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINL  372 (399)
T ss_dssp             CCHHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEEC
T ss_pred             CCHHHHHHHHHHhCCEEEeCccccCCCCCCeEEEEe
Confidence            56777888885 7899987532        467754

>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*

Probab=99.26  E-value=5.3e-11  Score=113.28  Aligned_cols=217  Identities=12%  Similarity=0.060  Sum_probs=138.8

Q ss_pred             eccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHh
Q psy10669         36 IASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEK  115 (337)
Q Consensus        36 ~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~a  115 (337)
                      -++.+.++|++.+++...+.+.        + |.......++|    +++++++|.++     .+.+.||+.|+..++.+
T Consensus         8 ~~~~~~~~~~v~~a~~~~~~~~--------~-~~~~~~~~~l~----~~la~~~~~~~-----~~~~~sGt~al~~al~~   69 (367)
T 3nyt_A            8 KNQQARIKDKIDAGIQRVLRHG--------Q-YILGPEVTELE----DRLADFVGAKY-----CISCANGTDALQIVQMA   69 (367)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHC--------C-CSSCHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHHH
T ss_pred             cccccccCHHHHHHHHHHHhcC--------C-ccCChHHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHH
Confidence            3344455788888887665432        1 22233455665    68889999874     57778889999888888


Q ss_pred             h-CCc----------------------------------------ccc-----cccEEEEcCcccccccChHHHHHHhhh
Q psy10669        116 A-LPT----------------------------------------NNA-----RFDFLSSGTTCYSRCLDYARFRQICDE  149 (337)
Q Consensus       116 L-l~~----------------------------------------~~a-----~pklII~~~S~~~~~~d~~~l~eia~~  149 (337)
                      + +++                                        .+.     ++++|+.. ..++...|+++|.++|++
T Consensus        70 ~~~~~gd~Vi~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~-~~~G~~~~~~~i~~la~~  148 (367)
T 3nyt_A           70 LGVGPGDEVITPGFTYVATAETVALLGAKPVYVDIDPRTYNLDPQLLEAAITPRTKAIIPV-SLYGQCADFDAINAIASK  148 (367)
T ss_dssp             TTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCGGGTGGGCCTTEEEECCB-CGGGCCCCHHHHHHHHHH
T ss_pred             hCCCCcCEEEECCCccHHHHHHHHHcCCEEEEEecCCccCCcCHHHHHHhcCcCCcEEEee-CCccChhhHHHHHHHHHH
Confidence            8 543                                        111     25777754 357889999999999999


Q ss_pred             cCCeEEEeccccccccc----------eeeee---cc------CCchhhh---hHHHHHhhccCC-----------CCCC
Q psy10669        150 TDSIMFADMSHISGLIA----------GVKGV---TK------TGEKILY---DYEEKINNAVFP-----------SLQG  196 (337)
Q Consensus       150 ~ga~l~vD~AH~~Gli~----------g~~~T---~~------~Gg~i~~---~l~~~i~~~~~p-----------~~~g  196 (337)
                      +|+++++|++|+.|...          .++++   +|      .||++++   ++.+.+......           +...
T Consensus       149 ~~~~li~D~a~~~g~~~~~~~~~~~~di~~~Sf~~~K~l~~~g~gg~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~  228 (367)
T 3nyt_A          149 YGIPVIEDAAQSFGASYKGKRSCNLSTVACTSFFPSAPLGCYGDGGAIFTNDDELATAIRQIARHGQDRRYHHIRVGVNS  228 (367)
T ss_dssp             TTCCBEEECTTTTTCEETTEETTSSSSEEEEECCTTSSSCCSSCCEEEEESCHHHHHHHHHHTBTTEEETTEECSCCCBC
T ss_pred             cCCEEEEECccccCCeECCeeccCCCCEEEEECCCCCcCCCcCceeEEEeCCHHHHHHHHHHHhcCCCcCceeeccCcCC
Confidence            99999999999987652          12333   22      1566665   365555442221           1112


Q ss_pred             CCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCC----CCCeEEEEEecCCCcchHHHHHHHh
Q psy10669        197 GPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGG----TDVHLILIDLRKNKLTGSKVELVLE  272 (337)
Q Consensus       197 ~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~----t~~h~v~V~~~~~~~~~~~~~~~L~  272 (337)
                      ..+ +..++++.+.  +  ...++..++..++++++.+.|.+.|+.+....    ...|+.++.+.    +..++.+.|.
T Consensus       229 ~~~-~~~aa~~~~~--l--~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~L~  299 (367)
T 3nyt_A          229 RLD-TLQAAILLPK--L--EIFEEEIALRQKVAAEYDLSLKQVGIGTPFIEVNNISVYAQYTVRMD----NRESVQASLK  299 (367)
T ss_dssp             CCC-HHHHHHHHHH--H--HTHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTEECCCSSEEEECS----SHHHHHHHHH
T ss_pred             Ccc-HHHHHHHHHH--H--HHHHHHHHHHHHHHHHHHHHhccCCeeccCCCCCCceeeEEEEEEeC----CHHHHHHHHH
Confidence            222 2223322222  2  23456778888999999999999887664311    22345555543    5678888999


Q ss_pred             hcCceecc
Q psy10669        273 EIAIACNK  280 (337)
Q Consensus       273 ~~gI~v~~  280 (337)
                      +.||.+..
T Consensus       300 ~~GI~~~~  307 (367)
T 3nyt_A          300 AAGVPTAV  307 (367)
T ss_dssp             HHTCCCBC
T ss_pred             HCCCceec
Confidence            88998764

>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}

Probab=99.25  E-value=4.8e-10  Score=108.61  Aligned_cols=247  Identities=12%  Similarity=0.118  Sum_probs=153.2

Q ss_pred             ccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCC--CCCCCcceeecCCC
Q psy10669         30 INGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNL--DPEQWGCNVQPYSG  105 (337)
Q Consensus        30 ~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~--~~~~~~~~v~~~Sg  105 (337)
                      ...|.|...+|..  +|.|++++...+.+....+++...   |   ..+++....+.+.+.+|.  +.    .+|.+++|
T Consensus        44 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~---g---~~~lr~~la~~~~~~~g~~~~~----~~i~~t~g  113 (437)
T 3g0t_A           44 TKFCRMEMGVPGLPAPQIGIETEIQKLREGVASIYPNLD---G---LPELKQEASRFAKLFVNIDIPA----RACVPTVG  113 (437)
T ss_dssp             CCCEECCCCSCCSCCCHHHHHHHHHHHHHTGGGSCCCTT---C---CHHHHHHHHHHHHHHHCCCCCG----GGEEEESH
T ss_pred             CCEEeccCcCCCCCCCHHHHHHHHHHHhCCcCcCCCCCC---C---hHHHHHHHHHHHHHhhCCCCCc----ccEEEeCC
Confidence            4567777777665  899999998776532112332211   1   234443222333333342  33    25777776


Q ss_pred             -chhHHHHHHhhC--C-----c----------------------------------------c-c--ccccEEEEc-Ccc
Q psy10669        106 -SPANFAVCEKAL--P-----T----------------------------------------N-N--ARFDFLSSG-TTC  133 (337)
Q Consensus       106 -t~AN~~v~~aLl--~-----~----------------------------------------~-~--a~pklII~~-~S~  133 (337)
                       +.|+..++.+++  +     .                                        + +  .++++|++. +.+
T Consensus       114 ~t~al~~~~~~l~~~~~gd~~~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~n  193 (437)
T 3g0t_A          114 SMQGCFVSFLVANRTHKNREYGTLFIDPGFNLNKLQCRILGQKFESFDLFEYRGEKLREKLESYLQTGQFCSIIYSNPNN  193 (437)
T ss_dssp             HHHHHHHHHHHHTTSCTTCSCCEEEEESCCHHHHHHHHHHTCCCEEEEGGGGCTTHHHHHHHHHHTTTCCCEEEEESSCT
T ss_pred             HHHHHHHHHHHHhcCCCCCccEEEEeCCCcHhHHHHHHHcCCEEEEEeecCCCCccCHHHHHHHHhcCCceEEEEeCCCC
Confidence             678888888886  2     2                                        0 1  126777663 433


Q ss_pred             -cccccC---hHHHHHHhhhcCCeEEEecccccccc-------------c---------eeeeec-c----C---Cchhh
Q psy10669        134 -YSRCLD---YARFRQICDETDSIMFADMSHISGLI-------------A---------GVKGVT-K----T---GEKIL  179 (337)
Q Consensus       134 -~~~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli-------------~---------g~~~T~-~----~---Gg~i~  179 (337)
                       .+...+   +++|.++|+++|++|++|++|..+..             .         .++++. |    .   .|+++
T Consensus       194 ptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~  273 (437)
T 3g0t_A          194 PTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAGQRIGVLM  273 (437)
T ss_dssp             TTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGGGCCEEEE
T ss_pred             CCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEEEcCccCCCCccceeEEEE
Confidence             345665   55677889999999999999974211             1         112332 2    1   25555


Q ss_pred             h--hHHH-H-----------------HhhccCCCCCCCCcHHHHHHHHHHHHHHhc--hhhHHHHHHHHHHHHHHHHHHH
Q psy10669        180 Y--DYEE-K-----------------INNAVFPSLQGGPHNHAIGAIATAMLQAQS--DEFKSYQAQVKANASHLSDEMI  237 (337)
Q Consensus       180 ~--~l~~-~-----------------i~~~~~p~~~g~~~~~~iaala~a~~e~~~--~~~~~y~~~v~~na~~l~~~L~  237 (337)
                      .  ++.+ .                 +..... ....++++...+++..++.....  ...++.++++.++.+++.+.|.
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~  352 (437)
T 3g0t_A          274 ISGKLYEREYPDLEESFGRLRFGEALSSSALY-ALSSGATHSAQWGMAAMLKACNDGEYNFRDSVIEYGRKARIMKKMFL  352 (437)
T ss_dssp             ECHHHHHCBCGGGHHHHSCSBHHHHHHTTHHH-HHHSSSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ECHHHhhhhhhcccccccccchhHHHHHHHHh-hhcCCCCHHHHHHHHHHHhCcHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4  4544 4                 433211 11346677777777777766421  1167889999999999999999


Q ss_pred             hCCCEEe------cCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCc--------ccchhhh
Q psy10669        238 KRGYHVV------TGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT--------GISLAAE  289 (337)
Q Consensus       238 ~~G~~v~------~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~--------girig~~  289 (337)
                      +.|+++.      .....++.+++++.  +.+..++.+.|.+.||.+.+-.        .+||+..
T Consensus       353 ~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~L~~~gi~v~~~~~~~~~~~~~iRis~~  416 (437)
T 3g0t_A          353 DNGFNIVYDKDGNEPLADGFYFTVGYK--GMDSSKLIEKFVRYGMCAITLKTTGSKRNEAMRICTS  416 (437)
T ss_dssp             TTTEEESSCEETTEECCSSSEEEEEET--TCCHHHHHHHHHHTTEECEESTTTTCCCTTCEEEECS
T ss_pred             HcCCEEeccccCCCCCceeEEEEEecC--CCCHHHHHHHHHHcCeEEeeccccCCCCCCEEEEEEe
Confidence            9999887      22245677888887  5678888899988899987543        4787644

>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*

Probab=99.25  E-value=6.2e-10  Score=106.03  Aligned_cols=228  Identities=14%  Similarity=0.131  Sum_probs=145.8

Q ss_pred             ccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-c
Q psy10669         30 INGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-S  106 (337)
Q Consensus        30 ~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t  106 (337)
                      ...|.|...++-.  +|.+.+++...+..  ...      |.......+++    +.++++++.+..    ++.+++| +
T Consensus        25 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~--~~~------y~~~~~~~~l~----~~la~~~~~~~~----~v~~~~g~~   88 (381)
T 1v2d_A           25 LGAVNLGQGFPSNPPPPFLLEAVRRALGR--QDQ------YAPPAGLPALR----EALAEEFAVEPE----SVVVTSGAT   88 (381)
T ss_dssp             HTCEECCCCSCSSCCCHHHHHHHHHHTTT--SCS------CCCTTCCHHHH----HHHHHHHTSCGG----GEEEESSHH
T ss_pred             CCeEEecCCCCCCCCCHHHHHHHHHHHHH--hcC------CCCCCCCHHHH----HHHHHhcCCChh----hEEEcCChH
Confidence            4567777766653  79999999876542  111      21111223444    577889998752    4666665 7


Q ss_pred             hhHHHHHHhhCCc------------------------------c---c-----------c---cccEEEEcCccc--ccc
Q psy10669        107 PANFAVCEKALPT------------------------------N---N-----------A---RFDFLSSGTTCY--SRC  137 (337)
Q Consensus       107 ~AN~~v~~aLl~~------------------------------~---~-----------a---~pklII~~~S~~--~~~  137 (337)
                      .|+..++.+++++                              .   .           +   ++++|++..-.+  +..
T Consensus        89 ~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~  168 (381)
T 1v2d_A           89 EALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGFRLDLSALEKALTPRTRALLLNTPMNPTGLV  168 (381)
T ss_dssp             HHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHTTCCTTEEEEEEESSCTTTCCC
T ss_pred             HHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCCCCccCCcCHHHHHHhcCcCCEEEEECCCCCCCCCc
Confidence            8998888888653                              1   0           0   157777652222  344


Q ss_pred             cC---hHHHHHHhhhcCCeEEEeccccccccc--------------eeeeec-c-------CCchhhh--hHHHHHhhcc
Q psy10669        138 LD---YARFRQICDETDSIMFADMSHISGLIA--------------GVKGVT-K-------TGEKILY--DYEEKINNAV  190 (337)
Q Consensus       138 ~d---~~~l~eia~~~ga~l~vD~AH~~Gli~--------------g~~~T~-~-------~Gg~i~~--~l~~~i~~~~  190 (337)
                      .+   +++|.++|+++|+++++|++|..+..+              .++++. |       +.|+++.  ++.+.+....
T Consensus       169 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  248 (381)
T 1v2d_A          169 FGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLREFAPERTFTVGSAGKRLEATGYRVGWIVGPKEFMPRLAGMR  248 (381)
T ss_dssp             CCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCHHHHCTTTEEEEEEHHHHTTCGGGCCEEEECCTTTHHHHHHHH
T ss_pred             cCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHhcCCCEEEEeechhhcCCcccceEEEEeCHHHHHHHHHHH
Confidence            44   778889999999999999999864331              112222 2       1256554  4555544321


Q ss_pred             CCCCCCCCcHHHHHHHHHHHHHHh-chhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHH
Q psy10669        191 FPSLQGGPHNHAIGAIATAMLQAQ-SDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVEL  269 (337)
Q Consensus       191 ~p~~~g~~~~~~iaala~a~~e~~-~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~  269 (337)
                      . ....+++++..+++..++.... ....++.++++.++.++|.+.|.+.|+++... ..+..+++++...  +   +.+
T Consensus       249 ~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~~~~~~--~---~~~  321 (381)
T 1v2d_A          249 Q-WTSFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAMGLRVYVP-EGTYFLMAELPGW--D---AFR  321 (381)
T ss_dssp             H-HHTSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHTTCCEECC-SBSSEEEEECTTC--C---HHH
T ss_pred             h-hcccCCCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHCCCEecCC-CcceEEEEecChH--h---HHH
Confidence            1 1123556677777777776542 33457889999999999999999999998752 2245677777543  2   777


Q ss_pred             HHhhcCceecc
Q psy10669        270 VLEEIAIACNK  280 (337)
Q Consensus       270 ~L~~~gI~v~~  280 (337)
                      .|.+.||.+.+
T Consensus       322 ~l~~~gi~v~~  332 (381)
T 1v2d_A          322 LVEEARVALIP  332 (381)
T ss_dssp             HHHHTCEECEE
T ss_pred             HHHhCCEEEec
Confidence            88889999875

>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1

Probab=99.24  E-value=6.6e-10  Score=105.93  Aligned_cols=248  Identities=14%  Similarity=0.040  Sum_probs=148.7

Q ss_pred             cccceeeeccCCC--CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-
Q psy10669         29 QINGIELIASENF--TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-  105 (337)
Q Consensus        29 q~~~i~l~asen~--~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-  105 (337)
                      .+..|.|...++.  .+|.+.+++...+.+. ..+      |....-..+++....+.+.+.+|.+...  .+|.+++| 
T Consensus        29 g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~------y~~~~g~~~l~~~la~~~~~~~g~~~~~--~~v~~~~g~   99 (388)
T 1j32_A           29 GIDVCSFSAGEPDFNTPKHIVEAAKAALEQG-KTR------YGPAAGEPRLREAIAQKLQRDNGLCYGA--DNILVTNGG   99 (388)
T ss_dssp             TCCCEECCCSSCSSCCCHHHHHHHHHHHHTT-CCS------CCCTTCCHHHHHHHHHHHHHHHCCCCCG--GGEEEESHH
T ss_pred             CCCEEECCCCCCCCCCCHHHHHHHHHHHhcC-CCC------CCCCCCCHHHHHHHHHHHHHhcCCCCCh--hhEEEcCCH
Confidence            3456777666664  3799999988765331 111      2222223455544445666666753210  25777776 


Q ss_pred             chhHHHHHHhhCCc-------------------------------c----------c--c---cccEEEEc-Ccc-cccc
Q psy10669        106 SPANFAVCEKALPT-------------------------------N----------N--A---RFDFLSSG-TTC-YSRC  137 (337)
Q Consensus       106 t~AN~~v~~aLl~~-------------------------------~----------~--a---~pklII~~-~S~-~~~~  137 (337)
                      ++|+..++.+++++                               .          +  +   ++++|++. .++ .+..
T Consensus       100 ~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~  179 (388)
T 1j32_A          100 KQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAITPKTKLLVFNTPSNPTGMV  179 (388)
T ss_dssp             HHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHHHHHHCCTTEEEEEEESSCTTTCCC
T ss_pred             HHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCEEEEecCCcccCCCCCHHHHHHhcCcCceEEEEeCCCCCCCcC
Confidence            78998888988654                               0          0  0   25667655 322 2444


Q ss_pred             c---ChHHHHHHhhhcCCeEEEeccccccccc------------------eeeeec-c----CC---chhhh--hHHHHH
Q psy10669        138 L---DYARFRQICDETDSIMFADMSHISGLIA------------------GVKGVT-K----TG---EKILY--DYEEKI  186 (337)
Q Consensus       138 ~---d~~~l~eia~~~ga~l~vD~AH~~Gli~------------------g~~~T~-~----~G---g~i~~--~l~~~i  186 (337)
                      .   ++++|.++|+++|+++++|++|..+...                  .+.++. |    .|   |+++.  ++.+.+
T Consensus       180 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~~~~l  259 (388)
T 1j32_A          180 YTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGPVPLVKAA  259 (388)
T ss_dssp             CCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCEEEECCHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeechhccCCcccceEEEEeCHHHHHHH
Confidence            3   4778889999999999999999764331                  122332 2    13   55554  466655


Q ss_pred             hhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCCCcchH
Q psy10669        187 NNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKNKLTGS  265 (337)
Q Consensus       187 ~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~~~~~~  265 (337)
                      .....+...+ +++...++...++... ....++.++++.++.++|.+.|.+. |+++..+ ..+..+++++...+.+..
T Consensus       260 ~~~~~~~~~~-~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~  336 (388)
T 1j32_A          260 TKIQGHSTSN-VCTFAQYGAIAAYENS-QDCVQEMLAAFAERRRYMLDALNAMPGLECPKP-DGAFYMFPSIAKTGRSSL  336 (388)
T ss_dssp             HHHHHTTTCS-CCHHHHHHHHHHHHSC-SHHHHHHHHHHHHHHHHHHHHHHTCTTCBCCCC-CBTTEECCBCGGGTCCHH
T ss_pred             HHHHhhcccC-CCHHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCC-CeeEEEEEecCCCCCCHH
Confidence            5433333333 3444444444444322 3345678889999999999999986 8887642 234455566654345677


Q ss_pred             HHHHHHhh-cCceeccC------cccchhh
Q psy10669        266 KVELVLEE-IAIACNKN------TGISLAA  288 (337)
Q Consensus       266 ~~~~~L~~-~gI~v~~~------~girig~  288 (337)
                      ++.+.|.+ .||.+.+-      ..+||+.
T Consensus       337 ~~~~~l~~~~gi~v~~g~~~~~~~~iRis~  366 (388)
T 1j32_A          337 DFCSELLDQHQVATVPGAAFGADDCIRLSY  366 (388)
T ss_dssp             HHHHHHHHHHCEECEEGGGGTCTTBEEEEC
T ss_pred             HHHHHHHHhCCEEEeChhhhCCCCcEEEEe
Confidence            78877764 79998753      2577764

>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*

Probab=99.24  E-value=3.4e-10  Score=113.52  Aligned_cols=217  Identities=13%  Similarity=0.078  Sum_probs=133.5

Q ss_pred             CccchHHHHHHHHHHHHHhhcCCCCC-CCcceeecCCCchhHHHHHHhhCC---------------c-------------
Q psy10669         69 GGNQFIDEIEIVAQQRSLKAFNLDPE-QWGCNVQPYSGSPANFAVCEKALP---------------T-------------  119 (337)
Q Consensus        69 ~G~~~~~~lE~~~~~~~a~lfg~~~~-~~~~~v~~~Sgt~AN~~v~~aLl~---------------~-------------  119 (337)
                      .......++|..+.+.++++||.+.. .|  .+..++||.||+.++.++..               .             
T Consensus       128 ~~~p~~~~le~~~~~~l~~~~g~~~~~~~--~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~~~H~s~  205 (511)
T 3vp6_A          128 EIAPVFVLMEQITLKKMREIVGWSSKDGD--GIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSI  205 (511)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHTCCSSSCE--EEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCCEEEEEETTSCTHH
T ss_pred             ccCchHHHHHHHHHHHHHHHhCCCCCCCc--eEECCchHHHHHHHHHHHHHHhhhhhhhcCcccCCCeEEEECCCchHHH
Confidence            33455678998888999999999841 12  34445558998877665521               1             


Q ss_pred             ------------------------------c--cc-c------ccEEEEc--CcccccccChHHHHHHhhhcCCeEEEec
Q psy10669        120 ------------------------------N--NA-R------FDFLSSG--TTCYSRCLDYARFRQICDETDSIMFADM  158 (337)
Q Consensus       120 ------------------------------~--~a-~------pklII~~--~S~~~~~~d~~~l~eia~~~ga~l~vD~  158 (337)
                                                    +  +. .      |++|+++  .+..+..-|+++|.+||+++|++++||+
T Consensus       206 ~~~~~~~g~g~~~~~~v~~d~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~~~~~lhvD~  285 (511)
T 3vp6_A          206 KKAGAALGFGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDA  285 (511)
T ss_dssp             HHHHHHTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCCHHHHHHHHHHHTCEEEEEE
T ss_pred             HHHHHHcCCCCCcEEEeecCCCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCcccccHHHHHHHHHHcCCEEEEEc
Confidence                                          0  00 1      6677765  2335688899999999999999999999


Q ss_pred             cccccccc---------e------eeeeccC------C-chh-hh--hHHHHHhhccCCCC------------------C
Q psy10669        159 SHISGLIA---------G------VKGVTKT------G-EKI-LY--DYEEKINNAVFPSL------------------Q  195 (337)
Q Consensus       159 AH~~Gli~---------g------~~~T~~~------G-g~i-~~--~l~~~i~~~~~p~~------------------~  195 (337)
                      ||+.|++.         |      ++++.||      | |++ +.  ++.........+++                  +
T Consensus       286 a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~  365 (511)
T 3vp6_A          286 AWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMHASYLFQQDKHYDVSYDTGDKAIQ  365 (511)
T ss_dssp             TTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESSTTHHHHHHCCCCTTTCCSSCSSCGGGCCGGGSSC
T ss_pred             cchhhHhhChhhhhhccCCccCCEEEECcccccCCCcCeEEEEEeCHHHHHHHhccCCccccCcccccccccCccCCCCC
Confidence            99998873         1      2333333      2 333 33  23332211111111                  1


Q ss_pred             CCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecC-CCCCeEEEEEecCCCcc----------
Q psy10669        196 GGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTG-GTDVHLILIDLRKNKLT----------  263 (337)
Q Consensus       196 g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~-~t~~h~v~V~~~~~~~~----------  263 (337)
                      .+.. ....++..++..+....+++..++..+|+++|++.|.+. |++++.. .....++.+.+.+.+++          
T Consensus       366 ~~r~-~~al~~~~al~~~g~~gl~~~~~~~~~~a~~l~~~L~~~pg~~l~~~~~p~~~~v~f~~~p~~~~~~~~~~~~~~  444 (511)
T 3vp6_A          366 CGRH-VDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFWYIPQSLRGVPDSPQRRE  444 (511)
T ss_dssp             SSCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTEEESSSSCCSSSCEEEEECCGGGSSCCCCHHHHH
T ss_pred             CCCc-hHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEEEEeCccccccccchhHHH
Confidence            1111 134555566665555567899999999999999999985 9999862 23455555554443321          


Q ss_pred             -----hHHHHHHHhhcCceeccCc-------ccchhh
Q psy10669        264 -----GSKVELVLEEIAIACNKNT-------GISLAA  288 (337)
Q Consensus       264 -----~~~~~~~L~~~gI~v~~~~-------girig~  288 (337)
                           ..++.+.|.+.|+.+-.-.       -+||++
T Consensus       445 ~l~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRi~~  481 (511)
T 3vp6_A          445 KLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRMVI  481 (511)
T ss_dssp             HHHHHHHHHHHHHHHHTSCEEEEEEETTEEEEEEECC
T ss_pred             HHHHHHHHHHHHHHhcCCEEEEEEEeCCceEEEEEEe
Confidence                 2356777777675432211       388865

>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*

Probab=99.23  E-value=9.5e-10  Score=107.00  Aligned_cols=254  Identities=13%  Similarity=0.104  Sum_probs=149.9

Q ss_pred             HHHHHHHHHhhc---ccceeeeccCC------CCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhh
Q psy10669         18 LYSLIKKEKHRQ---INGIELIASEN------FTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKA   88 (337)
Q Consensus        18 ~~~~~~~e~~rq---~~~i~l~asen------~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~l   88 (337)
                      |..+.+.-+...   +.-|+|-..+-      ..+|.|++++...+......+|+.      .....+++    +.++++
T Consensus        39 i~~~~~~~~~~~~~~~~~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~~~~~~y~~------~~g~~~lr----~~la~~  108 (427)
T 3dyd_A           39 IRAIVDNMKVKPNPNKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAP------SIGFLSSR----EEIASY  108 (427)
T ss_dssp             --------CCCCCTTSCCEECCCSCTTTTSSSCCCHHHHHHHHHHHHHCCSSSCCC------TTCCHHHH----HHHHHH
T ss_pred             HHHHHHHHhhcccCCCCEEeCCCcCCCccCCCCCCHHHHHHHHHHHhcCcCCCCCC------CCCcHHHH----HHHHHH
Confidence            666655432222   23366665441      459999999987655421122221      12223444    567788


Q ss_pred             cC-----CCCCCCcceeecCCC-chhHHHHHHhhCCc-------------------------------------------
Q psy10669         89 FN-----LDPEQWGCNVQPYSG-SPANFAVCEKALPT-------------------------------------------  119 (337)
Q Consensus        89 fg-----~~~~~~~~~v~~~Sg-t~AN~~v~~aLl~~-------------------------------------------  119 (337)
                      ++     .+.    .+|.+++| +.|+..++.+++++                                           
T Consensus       109 ~~~~~~~~~~----~~v~~t~g~t~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l  184 (427)
T 3dyd_A          109 YHCPEAPLEA----KDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKTLAESMGIEVKLYNLLPEKSWEIDLKQL  184 (427)
T ss_dssp             HCBTTBCCCG----GGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHH
T ss_pred             HhhcCCCCCh----HHEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHH
Confidence            87     443    24666666 88998888988754                                           


Q ss_pred             ccc---cccEEEEc-Ccc-cccccC---hHHHHHHhhhcCCeEEEeccccccccc----------------eeeeeccC-
Q psy10669        120 NNA---RFDFLSSG-TTC-YSRCLD---YARFRQICDETDSIMFADMSHISGLIA----------------GVKGVTKT-  174 (337)
Q Consensus       120 ~~a---~pklII~~-~S~-~~~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~----------------g~~~T~~~-  174 (337)
                      +.+   ++++|++. +++ .+...|   +++|.++|+++|+++++|++|......                .++++..| 
T Consensus       185 ~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~~~~vi~~~S~sK~  264 (427)
T 3dyd_A          185 EYLIDEKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKR  264 (427)
T ss_dssp             HSSCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCSSCCEEEEEESTTT
T ss_pred             HHHhccCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhCCCCcEEEEeecccc
Confidence            001   25655554 433 357778   888889999999999999999853222                12234322 


Q ss_pred             ----C---chhhh---------hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh
Q psy10669        175 ----G---EKILY---------DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK  238 (337)
Q Consensus       175 ----G---g~i~~---------~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~  238 (337)
                          |   |+++.         ++.+.+.....+  ..+++++..+++..++.......+++.++++.++.++|.+.|.+
T Consensus       265 ~~~~G~riG~~~~~~~~~~~~~~i~~~l~~~~~~--~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~L~~  342 (427)
T 3dyd_A          265 WLVPGWRLGWILIHDRRDIFGNEIRDGLVKLSQR--ILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAA  342 (427)
T ss_dssp             SSCGGGCCEEEEEECSTTSSHHHHHHHHHHHHHH--HCCSCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcCcceEEEEecCcchhhHHHHHHHHHHHHhc--cCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence                2   44442         233333322111  23677888888888776533344578889999999999999998


Q ss_pred             C-CCEEecCCCCCeEEEEEecCC----CcchHHHHHHH-hhcCceeccCc------ccchhh
Q psy10669        239 R-GYHVVTGGTDVHLILIDLRKN----KLTGSKVELVL-EEIAIACNKNT------GISLAA  288 (337)
Q Consensus       239 ~-G~~v~~~~t~~h~v~V~~~~~----~~~~~~~~~~L-~~~gI~v~~~~------girig~  288 (337)
                      . |+++..+ .....+++.+...    +.+..++...| ++.||.+.+..      .+||+.
T Consensus       343 ~~g~~~~~p-~~g~~~~~~l~~~~~~~~~~~~~~~~~l~~~~gV~v~~g~~~~~~~~iRis~  403 (427)
T 3dyd_A          343 IPGLRPVRP-SGAMYLMVGIEMEHFPEFENDVEFTERLVAEQSVHCLPATCFEYPNFIRVVI  403 (427)
T ss_dssp             STTEEEECC-SBTTEEEEEECGGGCTTCSSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEES
T ss_pred             CCCceecCC-CeeEEEEEecCHhhcCCCCCHHHHHHHHHHHCCEEEECCcccCCCCeEEEEE
Confidence            6 8887642 3445666666522    23455666555 57899998643      477764

>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*

Probab=99.23  E-value=3.2e-10  Score=108.16  Aligned_cols=224  Identities=13%  Similarity=0.085  Sum_probs=143.2

Q ss_pred             ceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHH
Q psy10669         32 GIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFA  111 (337)
Q Consensus        32 ~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~  111 (337)
                      .|.+..  ...++.+++++...+.+.+        +. ......+++    +.+++++|.++     .+.+.||+.|+..
T Consensus        10 ~i~~~~--p~~~~~~~~a~~~~~~~~~--------~~-~~~~~~~l~----~~la~~~~~~~-----~~~~~~gt~al~~   69 (393)
T 1mdo_A           10 FLPFSR--PAMGAEELAAVKTVLDSGW--------IT-TGPKNQELE----AAFCRLTGNQY-----AVAVSSATAGMHI   69 (393)
T ss_dssp             CBCSCC--CCCCHHHHHHHHHHHHHTC--------CS-SSHHHHHHH----HHHHHHHCCSE-----EEEESCHHHHHHH
T ss_pred             ccccCC--CCCCHHHHHHHHHHHhcCC--------cC-CChHHHHHH----HHHHHHhCCCc-----EEEecChHHHHHH
Confidence            455543  4578999999987655421        11 123334554    68899999874     4666777999988


Q ss_pred             HHHhh-CCc------------------------------------------c--cc-cccEEEEcCcccccccChHHHHH
Q psy10669        112 VCEKA-LPT------------------------------------------N--NA-RFDFLSSGTTCYSRCLDYARFRQ  145 (337)
Q Consensus       112 v~~aL-l~~------------------------------------------~--~a-~pklII~~~S~~~~~~d~~~l~e  145 (337)
                      ++.++ +++                                          +  +. ++++|++.. .++...|+++|.+
T Consensus        70 ~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~~~~-~~G~~~~~~~i~~  148 (393)
T 1mdo_A           70 ALMALGIGEGDEVITPSMTWVSTLNMIVLLGANPVMVDVDRDTLMVTPEHIEAAITPQTKAIIPVH-YAGAPADLDAIYA  148 (393)
T ss_dssp             HHHHTTCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCTTEEEECCBC-GGGCCCCHHHHHH
T ss_pred             HHHHcCCCCCCEEEeCCCccHhHHHHHHHCCCEEEEEeccCCcCCCCHHHHHHhcCCCceEEEEeC-CCCCcCCHHHHHH
Confidence            88988 654                                          0  00 267888764 6778889999999


Q ss_pred             HhhhcCCeEEEeccccccccc---------eeeeec---c-----CCchhhh---hHHHHHhhccCCC------------
Q psy10669        146 ICDETDSIMFADMSHISGLIA---------GVKGVT---K-----TGEKILY---DYEEKINNAVFPS------------  193 (337)
Q Consensus       146 ia~~~ga~l~vD~AH~~Gli~---------g~~~T~---~-----~Gg~i~~---~l~~~i~~~~~p~------------  193 (337)
                      +|+++|+++++|++|+.|+..         .+++++   |     .||+++.   ++.+.+.+....+            
T Consensus       149 l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~S~~k~K~l~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  228 (393)
T 1mdo_A          149 LGERYGIPVIEDAAHATGTSYKGRHIGARGTAIFSFHAIKNITCAEGGIVVTDNPQFADKLRSLKFHGLGVDAWDRQSGG  228 (393)
T ss_dssp             HHHHHTCCBCEECTTCTTCEETTEETTSSSEEEEECCTTSSSCSSSCEEEEESCHHHHHHHHHHTBTTEECC--------
T ss_pred             HHHHcCCeEEEECccccCCeECCeecCCCCeEEEeCCCCCccccccceEEEeCCHHHHHHHHHHHhcCCcccchhhhccc
Confidence            999999999999999987532         122332   2     3566654   3555544321111            


Q ss_pred             ---C-----CCC-C-cHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCC-----CCCeEEEEEec
Q psy10669        194 ---L-----QGG-P-HNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGG-----TDVHLILIDLR  258 (337)
Q Consensus       194 ---~-----~g~-~-~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~-----t~~h~v~V~~~  258 (337)
                         .     .|+ . ..+..++++..  .+  ...++..++..+++++|.+.|.+.++++....     +..+++++.+.
T Consensus       229 ~~~~~~~~~~g~~~~~~~~~~a~~~~--~l--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~v~~~  304 (393)
T 1mdo_A          229 RAPQAEVLAPGYKYNLPDLNAAIALA--QL--QKLDALNARRAAIAAQYHQAMADLPFQPLSLPSWEHIHAWHLFIIRVD  304 (393)
T ss_dssp             ---CCEESSCCCBCCCCHHHHHHHHH--HH--HTHHHHHHHHHHHHHHHHHHHHTSSCEECCCCSSCEECCCSCEEEECC
T ss_pred             ccccccccccCccCCCCHHHHHHHHH--HH--HHHHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCCCceeEEEEEEec
Confidence               1     111 1 12222222222  22  23456777888899999999999888775311     34567888775


Q ss_pred             CC--CcchHHHHHHHhhcCceecc
Q psy10669        259 KN--KLTGSKVELVLEEIAIACNK  280 (337)
Q Consensus       259 ~~--~~~~~~~~~~L~~~gI~v~~  280 (337)
                      ..  +.+..++.+.|.+.||.+..
T Consensus       305 ~~~~~~~~~~l~~~l~~~gi~v~~  328 (393)
T 1mdo_A          305 EARCGITRDALMASLKTKGIGTGL  328 (393)
T ss_dssp             HHHHSSCHHHHHHHHHHTTBCCBC
T ss_pred             ccccccCHHHHHHHHHhCCCCccc
Confidence            31  44678888999989998875

>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*

Probab=99.23  E-value=6.3e-10  Score=106.22  Aligned_cols=220  Identities=12%  Similarity=0.037  Sum_probs=140.5

Q ss_pred             CCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhh-CC
Q psy10669         40 NFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKA-LP  118 (337)
Q Consensus        40 n~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aL-l~  118 (337)
                      -.++|.+++++...+..    |..  . |.......+++    +++++++|.++     +|.++||+.|+..++.++ ++
T Consensus        13 p~~~~~~~~a~~~~l~~----~~~--~-~~~~~~~~~l~----~~la~~~~~~~-----~i~~~sGt~al~~~l~~l~~~   76 (388)
T 1b9h_A           13 PQYDDAERNGLVRALEQ----GQW--W-RMGGDEVNSFE----REFAAHHGAAH-----ALAVTNGTHALELALQVMGVG   76 (388)
T ss_dssp             SCCCHHHHHHHHHHHHT----SCC--B-TTTCSHHHHHH----HHHHHHTTCSE-----EEEESCHHHHHHHHHHHTTCC
T ss_pred             CCCCHHHHHHHHHHHHc----CCe--e-ecCCHHHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHHHcCCC
Confidence            34569999999876543    111  1 22223445555    68899999874     689999999998888998 65


Q ss_pred             c--------------------------------c--------c--c---cccEEEEcCcccccccChHHHHHHhhhcCCe
Q psy10669        119 T--------------------------------N--------N--A---RFDFLSSGTTCYSRCLDYARFRQICDETDSI  153 (337)
Q Consensus       119 ~--------------------------------~--------~--a---~pklII~~~S~~~~~~d~~~l~eia~~~ga~  153 (337)
                      +                                .        +  +   ++++|+.. ...+...|+++|.++|+++|++
T Consensus        77 ~gd~Vi~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~-n~tG~~~~l~~i~~la~~~~~~  155 (388)
T 1b9h_A           77 PGTEVIVPAFTFISSSQAAQRLGAVTVPVDVDAATYNLDPEAVAAAVTPRTKVIMPV-HMAGLMADMDALAKISADTGVP  155 (388)
T ss_dssp             TTCEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCTTEEEECCB-CGGGCCCCHHHHHHHHHHHTCC
T ss_pred             CcCEEEECCCccHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCcCceEEEEe-CCccCcCCHHHHHHHHHHcCCE
Confidence            4                                0        0  0   15666632 3457888999999999999999


Q ss_pred             EEEeccccccccc--------e--eeeec---c-----CCchhhh--h-H--HHHHhhccC------C-----CCCCC--
Q psy10669        154 MFADMSHISGLIA--------G--VKGVT---K-----TGEKILY--D-Y--EEKINNAVF------P-----SLQGG--  197 (337)
Q Consensus       154 l~vD~AH~~Gli~--------g--~~~T~---~-----~Gg~i~~--~-l--~~~i~~~~~------p-----~~~g~--  197 (337)
                      +++|++|+.|...        +  .+++.   |     .||++++  + +  .+.+.....      |     ...|+  
T Consensus       156 li~D~a~~~g~~~~~~~~~~~~~i~~~S~s~~K~l~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  235 (388)
T 1b9h_A          156 LLQDAAHAHGARWQGKRVGELDSIATFSFQNGKLMTAGEGGAVVFPDGETEKYETAFLRHSCGRPRDDRRYFHKIAGSNM  235 (388)
T ss_dssp             BCEECTTCTTCEETTEEGGGSSSCEEEECCTTSSSCSSSCEEEEECTTCHHHHHHHHHHTBTTCCTTCSSCCCCSCCCBC
T ss_pred             EEEecchhcCCccCCeecccccceEEEEccCCCcccCCCeEEEEECCHHHHHHHHHHHHHhCCCCccCccceeecccccC
Confidence            9999999987643        1  12221   2     4677764  2 5  444432110      0     01122  


Q ss_pred             -CcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecC-----CCCCeEEEEEecCC-CcchHHHHH
Q psy10669        198 -PHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTG-----GTDVHLILIDLRKN-KLTGSKVEL  269 (337)
Q Consensus       198 -~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~-----~t~~h~v~V~~~~~-~~~~~~~~~  269 (337)
                       ++....+++..++     ...++..++..++.++|.+.|.+. |+++...     ....+++++.+... +.+..++.+
T Consensus       236 ~~~~~~~a~~~~~~-----~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  310 (388)
T 1b9h_A          236 RLNEFSASVLRAQL-----ARLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPGLTEERRNALVD  310 (388)
T ss_dssp             BCBHHHHHHHHHHH-----TTHHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECTTCCHHHHHHHHH
T ss_pred             CcCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCccceEEEEEEeCCcCcccHHHHHH
Confidence             3433333322222     234567788889999999999985 8887642     12357888887642 125667888


Q ss_pred             HHhhcCceeccC
Q psy10669        270 VLEEIAIACNKN  281 (337)
Q Consensus       270 ~L~~~gI~v~~~  281 (337)
                      .|.+.||.+...
T Consensus       311 ~L~~~gI~v~~~  322 (388)
T 1b9h_A          311 RLVEAGLPAFAA  322 (388)
T ss_dssp             HHHHTTCCEEEC
T ss_pred             HHHHCCCCcccc
Confidence            888889988753

>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}

Probab=99.23  E-value=8e-10  Score=106.66  Aligned_cols=248  Identities=9%  Similarity=-0.001  Sum_probs=150.5

Q ss_pred             cceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-ch
Q psy10669         31 NGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SP  107 (337)
Q Consensus        31 ~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~  107 (337)
                      ..|.|...++..  +|.|.+++...+......+++.      .....+++....+.+++.+|.+.... .+|.+++| +.
T Consensus        48 ~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~------~~g~~~lr~~ia~~~~~~~g~~~~~~-~~v~~t~G~~~  120 (404)
T 2o1b_A           48 PLINMAVGIPDGPTPQGIIDHFQKALTIPENQKYGA------FHGKEAFKQAIVDFYQRQYNVTLDKE-DEVCILYGTKN  120 (404)
T ss_dssp             CCEECCCCSCSSCCCHHHHHHHHHHTTCHHHHSCCC------TTCCHHHHHHHHHHHHHHHCCCCCTT-TSEEEESSHHH
T ss_pred             CEEecCCcCCCCCCCHHHHHHHHHHHhCCCCCCCCC------CCCCHHHHHHHHHHHHHHhCCCCCCc-ccEEEcCCcHH
Confidence            357777766653  7999999987653210112221      11124455333344455558751100 14777777 67


Q ss_pred             hHHHHHHhhCCc----------------------------------------ccc-----cccEEEEcCccc--ccccC-
Q psy10669        108 ANFAVCEKALPT----------------------------------------NNA-----RFDFLSSGTTCY--SRCLD-  139 (337)
Q Consensus       108 AN~~v~~aLl~~----------------------------------------~~a-----~pklII~~~S~~--~~~~d-  139 (337)
                      |+..++.+++++                                        .+.     ++++|++..-.+  +...| 
T Consensus       121 al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~  200 (404)
T 2o1b_A          121 GLVAVPTCVINPGDYVLLPDPGYTDYLAGVLLADGKPVPLNLEPPHYLPDWSKVDSQIIDKTKLIYLTYPNNPTGSTATK  200 (404)
T ss_dssp             HHHHHHHHHCCTTCEEEEEESCCSSHHHHHHHTTCEEEEEECCTTTCCCCGGGSCHHHHHHEEEEEECSSCTTTCCCCCH
T ss_pred             HHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCcccCcCCHHHHHHhhccCceEEEEcCCCCCCCccCCH
Confidence            888888998754                                        011     167777752233  45554 


Q ss_pred             --hHHHHHHhhhcCCeEEEeccccccccc----------------eeeeeccC-----C---chhhh--hHHHHHhhccC
Q psy10669        140 --YARFRQICDETDSIMFADMSHISGLIA----------------GVKGVTKT-----G---EKILY--DYEEKINNAVF  191 (337)
Q Consensus       140 --~~~l~eia~~~ga~l~vD~AH~~Gli~----------------g~~~T~~~-----G---g~i~~--~l~~~i~~~~~  191 (337)
                        +++|.++|+++|+++++|++|..+...                .++++..|     |   |+++.  ++.+.+.....
T Consensus       201 ~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~  280 (404)
T 2o1b_A          201 EVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVGNKDMIQALKKYQT  280 (404)
T ss_dssp             HHHHHHHHHHTTSSCEEEEECTTTTCBSSSCCCCGGGSTTHHHHEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCCEEEEEecchhccCchhheEeEecCHHHHHHHHHHHh
Confidence              567888999999999999999864321                12233322     2   55554  46665554322


Q ss_pred             CCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHH
Q psy10669        192 PSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVL  271 (337)
Q Consensus       192 p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L  271 (337)
                      + ...+++.+..+++..++... ....++.++++.++.++|.+.|.+.|+++..+ ..+..+++++.. +.+..++.+.|
T Consensus       281 ~-~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~g~~~~~~~~~-~~~~~~l~~~l  356 (404)
T 2o1b_A          281 H-TNAGMFGALQDAAIYALNHY-DDFLEEQSNVFKTRRDRFEAMLAKADLPFVHA-KGGIYVWLETPP-GYDSEQFEQFL  356 (404)
T ss_dssp             H-HCCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHTTCCEECC-CBSSEEEEECCT-TCCHHHHHHHH
T ss_pred             h-ccCCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHhcCCeecCC-CcceEEEEeCCC-CCCHHHHHHHH
Confidence            1 12356677777776666553 23456778889999999999999999988652 224457777753 44667776665


Q ss_pred             h-hcCceeccCc--------ccchhhh
Q psy10669        272 E-EIAIACNKNT--------GISLAAE  289 (337)
Q Consensus       272 ~-~~gI~v~~~~--------girig~~  289 (337)
                      . +.||.+.+..        .+||+..
T Consensus       357 ~~~~gi~v~~g~~f~~~~~~~iRis~~  383 (404)
T 2o1b_A          357 VQEKSILVAPGKPFGENGNRYVRISLA  383 (404)
T ss_dssp             HHHHCEECEESGGGCGGGTTEEEEECC
T ss_pred             HHHCCEEEeCchhhCcCCCCeEEEEEc
Confidence            4 6799987632        4676643

>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0

Probab=99.23  E-value=5.4e-10  Score=106.81  Aligned_cols=226  Identities=12%  Similarity=0.041  Sum_probs=143.5

Q ss_pred             CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhC----
Q psy10669         42 TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL----  117 (337)
Q Consensus        42 ~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl----  117 (337)
                      .+|.|.+++...+. ++..+  . +.+ ......+++    +++++++|.+.     .+..+||+.||..++.++.    
T Consensus        53 ~~p~v~~a~~~~~~-~~~~~--~-~~~-~~~~~~~l~----~~la~~~g~~~-----v~~~~~gt~a~~~al~~~~~~~~  118 (392)
T 3ruy_A           53 RHPKIINALIDQAN-RVTLT--S-RAF-HSDQLGPWY----EKVAKLTNKEM-----VLPMNTGAEAVETAIKTARRWAY  118 (392)
T ss_dssp             TCHHHHHHHHHHHT-TCSCC--C-TTS-EETTHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHH-hcccc--c-ccc-CCHHHHHHH----HHHHHhcCCCE-----EEEeCcHHHHHHHHHHHHHHhhh
Confidence            48999999987643 33221  1 211 234445565    57788898542     3555666899877776542    


Q ss_pred             --------Cc-----------------------------------------------c--c-ccccEEEEcCccc--ccc
Q psy10669        118 --------PT-----------------------------------------------N--N-ARFDFLSSGTTCY--SRC  137 (337)
Q Consensus       118 --------~~-----------------------------------------------~--~-a~pklII~~~S~~--~~~  137 (337)
                              ++                                               +  + .++++|++....+  +..
T Consensus       119 ~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~  198 (392)
T 3ruy_A          119 DVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPYGDLEALKAAITPNTAAFILEPIQGEAGIN  198 (392)
T ss_dssp             HTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECTTCHHHHHHHCCTTEEEEEECSSBSTTTSB
T ss_pred             hccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCcccHHHHHHHhccCeEEEEEeCccCCCCCc
Confidence                    11                                               0  0 0267888864333  466


Q ss_pred             cC----hHHHHHHhhhcCCeEEEecccc-ccccc--------e-----eeeecc-------CCchhhh--hHHHHHhhcc
Q psy10669        138 LD----YARFRQICDETDSIMFADMSHI-SGLIA--------G-----VKGVTK-------TGEKILY--DYEEKINNAV  190 (337)
Q Consensus       138 ~d----~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g-----~~~T~~-------~Gg~i~~--~l~~~i~~~~  190 (337)
                      .|    +++|.++|+++|++|++|++|+ .|..+        +     ++++ |       .+|+++.  ++.+.+.+..
T Consensus       199 ~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~~~S-K~l~gG~~~~G~~~~~~~~~~~~~~~~  277 (392)
T 3ruy_A          199 IPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVFACDWDNVTPDMYILG-KALGGGVFPISCAAANRDILGVFEPGS  277 (392)
T ss_dssp             CCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEEC-GGGGTTTSCCEEEEECHHHHTTCCTTS
T ss_pred             cCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccchhhhccCCCCCEEEEc-hhhhCChhhhEEEEECHHHHhhhccCC
Confidence            66    9999999999999999999995 33221        1     1111 2       1244444  4555555433


Q ss_pred             CCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEec-CCCCCeEEEEEecCCCcchHHHHH
Q psy10669        191 FPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVT-GGTDVHLILIDLRKNKLTGSKVEL  269 (337)
Q Consensus       191 ~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~-~~t~~h~v~V~~~~~~~~~~~~~~  269 (337)
                      ... ..++++...+++..++..+..   ++.++++.++.++|.+.|.+.+..... .....+++.+.+..   ++.++.+
T Consensus       278 ~~~-~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~---~~~~l~~  350 (392)
T 3ruy_A          278 HGS-TFGGNPLACAVSIAALEVLEE---EKLTERSLQLGEKLVGQLKEIDNPMITEVRGKGLFIGIELNE---PARPYCE  350 (392)
T ss_dssp             SCC-SSTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHTTCCCTTEEEEEEETTEEEEEESS---CSHHHHH
T ss_pred             cCC-CCCCCHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHhcCCCceEEEeeeeEEEEEEcc---hHHHHHH
Confidence            322 236677788888777776532   577889999999999999987532221 11345667777754   5677888


Q ss_pred             HHhhcCceeccCc--ccchhhh
Q psy10669        270 VLEEIAIACNKNT--GISLAAE  289 (337)
Q Consensus       270 ~L~~~gI~v~~~~--girig~~  289 (337)
                      .|.+.||.+.+..  .+||+.+
T Consensus       351 ~l~~~gi~v~~~~~~~iRi~~~  372 (392)
T 3ruy_A          351 QLKAAGLLCKETHENVIRIAPP  372 (392)
T ss_dssp             HHHTTTEECCCBTTTEEEECCC
T ss_pred             HHHHCCcEEecCCCCEEEEECC
Confidence            8888999998743  6888744

>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}

Probab=99.23  E-value=1.1e-09  Score=104.08  Aligned_cols=239  Identities=9%  Similarity=-0.016  Sum_probs=145.2

Q ss_pred             cccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCC-CCCCcceeecCCC
Q psy10669         29 QINGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLD-PEQWGCNVQPYSG  105 (337)
Q Consensus        29 q~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~-~~~~~~~v~~~Sg  105 (337)
                      .+..|.|...++..  +|.|.+++...+.+...      ..|.......+++....+.+.+.+|.+ .++  .+|.+++|
T Consensus        24 g~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~------~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~~--~~v~~~~g   95 (376)
T 2dou_A           24 GVGLIDLSIGSTDLPPPEAPLKALAEALNDPTT------YGYCLKSCTLPFLEEAARWYEGRYGVGLDPR--REALALIG   95 (376)
T ss_dssp             TCCCEECSSCCCCCCCCHHHHHHHHHHTTCGGG------SSCCCHHHHHHHHHHHHHHHHHHHSCCCCTT--TSEEEESS
T ss_pred             CCCEEeccCCCCCCCCCHHHHHHHHHHHhCCCc------CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--ccEEEcCC
Confidence            34567777776653  89999999876532101      112222233455533333444445875 211  14777777


Q ss_pred             -chhHHHHHHhhCCc---------------------------------------ccc-----cccEEEEcCccc--cccc
Q psy10669        106 -SPANFAVCEKALPT---------------------------------------NNA-----RFDFLSSGTTCY--SRCL  138 (337)
Q Consensus       106 -t~AN~~v~~aLl~~---------------------------------------~~a-----~pklII~~~S~~--~~~~  138 (337)
                       ++|+..++.+++++                                       .+.     ++++|++..-.+  +...
T Consensus        96 ~~~a~~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~  175 (376)
T 2dou_A           96 SQEGLAHLLLALTEPEDLLLLPEVAYPSYFGAARVASLRTFLIPLREDGLADLKAVPEGVWREAKVLLLNYPNNPTGAVA  175 (376)
T ss_dssp             HHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHTTCEEEEECBCTTSSBCGGGSCHHHHHHEEEEEECSSCTTTCCCC
T ss_pred             cHHHHHHHHHHhcCCCCEEEECCCCcHhHHHHHHHcCCEEEEeeCCCCCCCCHHHHHHhhccCceEEEECCCCCCcCccC
Confidence             67888888888753                                       011     167887762222  4455


Q ss_pred             C---hHHHHHHhhhcCCeEEEeccccccccc----------------eeeeec-c-------CCchhhh--hHHHHHhhc
Q psy10669        139 D---YARFRQICDETDSIMFADMSHISGLIA----------------GVKGVT-K-------TGEKILY--DYEEKINNA  189 (337)
Q Consensus       139 d---~~~l~eia~~~ga~l~vD~AH~~Gli~----------------g~~~T~-~-------~Gg~i~~--~l~~~i~~~  189 (337)
                      |   +++|.++|+++|+++++|++|..+...                .+.+|. |       +.|+++.  ++.+.+...
T Consensus       176 ~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~  255 (376)
T 2dou_A          176 DWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGSEEALARLERV  255 (376)
T ss_dssp             CHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEECHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCcEEEEecchhhcCChhheeEEEecCHHHHHHHHHH
Confidence            5   556778999999999999999864321                012222 2       1266654  466655543


Q ss_pred             cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHH
Q psy10669        190 VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVEL  269 (337)
Q Consensus       190 ~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~  269 (337)
                      ..+. ..+++++..+++..++... ....++.++++.++.++|.+.|.+. +++..+ ..+..+++.+.. +.+..++.+
T Consensus       256 ~~~~-~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~-~~~~~~~~~~~~-~~~~~~~~~  330 (376)
T 2dou_A          256 KGVI-DFNQYAGVLRMGVEALKTP-KEVVRGYARVYRERALGMAEALKGV-LSLLPP-RATMYLWGRLPE-GVDDLEFGL  330 (376)
T ss_dssp             HHHH-CCCSCHHHHHHHHHHHTSC-HHHHHHHHHHHHHHHHHHHHHHTTT-SEECCC-CBSSEEEEECCT-TCCHHHHHH
T ss_pred             HHhc-ccCCCHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHh-cCccCC-CeeEEEEEECCC-CCCHHHHHH
Confidence            2222 2245666666666666442 2345677888899999999999888 777542 234567787754 446677777


Q ss_pred             HHhhcCceecc
Q psy10669        270 VLEEIAIACNK  280 (337)
Q Consensus       270 ~L~~~gI~v~~  280 (337)
                      .|.+.||.+.+
T Consensus       331 ~l~~~gi~v~~  341 (376)
T 2dou_A          331 RLVERGVALAP  341 (376)
T ss_dssp             HHHHTTEECEE
T ss_pred             HHHHCCEEEcC
Confidence            78777999875

>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*

Probab=99.22  E-value=3e-10  Score=109.31  Aligned_cols=219  Identities=14%  Similarity=0.097  Sum_probs=135.6

Q ss_pred             cCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhh-
Q psy10669         38 SENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKA-  116 (337)
Q Consensus        38 sen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aL-  116 (337)
                      ++-+++|++++++...+.+.|..  +     .| ....+++    +.+++++|.+.     .+...||+.|+..++.++ 
T Consensus         6 ~~p~~~~~v~~a~~~~~~~~~~~--~-----~g-~~~~~l~----~~la~~~~~~~-----v~~~~ggt~al~~~~~~l~   68 (394)
T 1o69_A            6 SPPHMGGNELKYIEEVFKSNYIA--P-----LG-EFVNRFE----QSVKDYSKSEN-----ALALNSATAALHLALRVAG   68 (394)
T ss_dssp             ------CCHHHHHHHHHHHTTTS--C-----TT-HHHHHHH----HHHHHHHCCSE-----EEEESCHHHHHHHHHHHTT
T ss_pred             CCCCCCHHHHHHHHHHHHcCCcc--C-----CC-hHHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHcC
Confidence            34467888999988776543311  0     12 2334554    68889999853     355566689998888988 


Q ss_pred             CCc-----------------------------------------c--c-c---cccEEEEcCcccccccChHHHHHHhhh
Q psy10669        117 LPT-----------------------------------------N--N-A---RFDFLSSGTTCYSRCLDYARFRQICDE  149 (337)
Q Consensus       117 l~~-----------------------------------------~--~-a---~pklII~~~S~~~~~~d~~~l~eia~~  149 (337)
                      +++                                         +  + .   ++++|++.. .++...|+++|.++|++
T Consensus        69 ~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~v~~~~-~~G~~~~l~~i~~l~~~  147 (394)
T 1o69_A           69 VKQDDIVLASSFTFIASVAPICYLKAKPVFIDCDETYNIDVDLLKLAIKECEKKPKALILTH-LYGNAAKMDEIVEICKE  147 (394)
T ss_dssp             CCTTCEEEEESSSCGGGTHHHHHTTCEEEEECBCTTSSBCHHHHHHHHHHCSSCCCEEEEEC-GGGCCCCHHHHHHHHHH
T ss_pred             CCCCCEEEECCCccHHHHHHHHHcCCEEEEEEeCCCCCcCHHHHHHHHhcccCCceEEEEEC-CCCChhhHHHHHHHHHH
Confidence            653                                         0  0 1   367787764 67788999999999999


Q ss_pred             cCCeEEEeccccccccc-e----------e-eee-cc-----CCchhhh---hHHHHHhhccCCCC------C-------
Q psy10669        150 TDSIMFADMSHISGLIA-G----------V-KGV-TK-----TGEKILY---DYEEKINNAVFPSL------Q-------  195 (337)
Q Consensus       150 ~ga~l~vD~AH~~Gli~-g----------~-~~T-~~-----~Gg~i~~---~l~~~i~~~~~p~~------~-------  195 (337)
                      +|+++++|++|..|+.. +          + +++ +|     .+|+++.   ++.+.+.....++.      +       
T Consensus       148 ~~~~li~Dea~~~g~~~~~~~~~~~~~~~~~s~s~~K~l~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~g~~  227 (394)
T 1o69_A          148 NDIVLIEDAAEALGSFYKNKALGTFGEFGVYSYNGNKIITTSGGGMLIGKNKEKIEKARFYSTQARENCLHYEHLDYGYN  227 (394)
T ss_dssp             TTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHTBTCCCSSSSCCCSSCCCB
T ss_pred             cCCEEEEECcCcccceeCCcccccccCcEEEEEeCCccCCCCCceEEEECCHHHHHHHHHHHHhccccCccccccccCcc
Confidence            99999999999987543 1          1 111 12     3566654   35555543211111      0       


Q ss_pred             -CCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCC----CCCeEEEEEecCC----------
Q psy10669        196 -GGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGG----TDVHLILIDLRKN----------  260 (337)
Q Consensus       196 -g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~----t~~h~v~V~~~~~----------  260 (337)
                       ++++....+++.    .+  ..+++..+++.++.+++.+.|.+. +++....    +..|++++.+...          
T Consensus       228 ~~~~~~~aa~~l~----~l--~~l~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  300 (394)
T 1o69_A          228 YRLSNVLGAIGVA----QM--EVLEQRVLKKREIYEWYKEFLGEY-FSFLDELENSRSNRWLSTALINFDKNELNACQKD  300 (394)
T ss_dssp             CBCCHHHHHHHHH----HH--TTHHHHHHHHHHHHHHHHHHHTTT-EECCCCCTTEECCCSSEEEEESCCGGGSCCCCEE
T ss_pred             cCcCHHHHHHHHH----HH--HHHHHHHHHHHHHHHHHHHHhccc-ccccCCCCCCcceeEEEEEEecchhhcccccccc
Confidence             122222222222    21  234567899999999999999887 6665421    1234677777632          


Q ss_pred             ----------CcchHHHHHHHhhcCceeccC
Q psy10669        261 ----------KLTGSKVELVLEEIAIACNKN  281 (337)
Q Consensus       261 ----------~~~~~~~~~~L~~~gI~v~~~  281 (337)
                                +++..++.+.|.+.||.++..
T Consensus       301 ~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~  331 (394)
T 1o69_A          301 INISQKNITLHPKISKLIEDLKNKQIETRPL  331 (394)
T ss_dssp             EECCCCCCCCCHHHHHHHHHHHHTTCCCBCC
T ss_pred             ccccccccccccCHHHHHHHHHHcCCccccc
Confidence                      346778889998899988753

>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A

Probab=99.21  E-value=1.5e-09  Score=103.04  Aligned_cols=239  Identities=12%  Similarity=0.052  Sum_probs=155.6

Q ss_pred             ceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcC--CCCCCCcceeecCCC-c
Q psy10669         32 GIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFN--LDPEQWGCNVQPYSG-S  106 (337)
Q Consensus        32 ~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg--~~~~~~~~~v~~~Sg-t  106 (337)
                      .|.|...+|.+  +|.|.+++...+.+ +.  ....+ |..... .+++....+.+.+.+|  .+.    .+|.+++| +
T Consensus        32 ~idl~~~~~~~~~~~~v~~a~~~~~~~-~~--~~~~~-y~~~~~-~~l~~~la~~l~~~~g~~~~~----~~v~~~~G~~  102 (369)
T 3cq5_A           32 DIRLNTNENPYPPSEALVADLVATVDK-IA--TELNR-YPERDA-VELRDELAAYITKQTGVAVTR----DNLWAANGSN  102 (369)
T ss_dssp             SEECSSCCCCSCCCHHHHHHHHHHHHH-HG--GGTTS-CCCTTC-HHHHHHHHHHHHHHHCCCCCG----GGEEEESHHH
T ss_pred             ceeccCCCCCCCCCHHHHHHHHHHHHh-cc--ccccc-CCCccH-HHHHHHHHHhhhhcccCCCCh----HhEEECCChH
Confidence            37777777743  89999999876543 21  11112 211112 3555433334444444  333    35888888 5


Q ss_pred             hhHHHHHHhhCCc---------------------------------------cc-----c-cccEEEEcCcc--cccccC
Q psy10669        107 PANFAVCEKALPT---------------------------------------NN-----A-RFDFLSSGTTC--YSRCLD  139 (337)
Q Consensus       107 ~AN~~v~~aLl~~---------------------------------------~~-----a-~pklII~~~S~--~~~~~d  139 (337)
                      .++..++.+++++                                       ++     . ++++|++..-.  .+...|
T Consensus       103 ~al~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~  182 (369)
T 3cq5_A          103 EILQQLLQAFGGPGRTALGFQPSYSMHPILAKGTHTEFIAVSRGADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTS  182 (369)
T ss_dssp             HHHHHHHHHHCSTTCEEEEEESSCTHHHHHHHHTTCEEEEEECCTTSSCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCC
T ss_pred             HHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEecCCcCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCC
Confidence            6777778888654                                       00     1 36777775322  368889


Q ss_pred             hHHHHHHhhhcCCeEEEeccccccccc----------e----eeeeccC-----C---chhhh--hHHHHHhhccCCCCC
Q psy10669        140 YARFRQICDETDSIMFADMSHISGLIA----------G----VKGVTKT-----G---EKILY--DYEEKINNAVFPSLQ  195 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~~Gli~----------g----~~~T~~~-----G---g~i~~--~l~~~i~~~~~p~~~  195 (337)
                      .+++.+||+.+++++++|++|..+...          +    +.+|.+|     |   |+++.  ++.+.+.....++  
T Consensus       183 ~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~--  260 (369)
T 3cq5_A          183 LDDVERIINVAPGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANPAFIDAVMLVRLPY--  260 (369)
T ss_dssp             HHHHHHHHHHCSSEEEEECTTGGGCCSCCGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEECTHHHHHHHTTSCTT--
T ss_pred             HHHHHHHHHhCCCEEEEECCchhhcCCcchHHHHhhCCCCEEEEEechHhcCCcccceEEEEeCHHHHHHHHHcCCCC--
Confidence            999999999999999999999865421          1    1233322     3   55554  5667776554432  


Q ss_pred             CCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcC
Q psy10669        196 GGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIA  275 (337)
Q Consensus       196 g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~g  275 (337)
                       +++++..++...++...  ...++.++++.++.++|.+.|.+.|+++..  .+.+.+++.+.   .+..++.+.|.+.|
T Consensus       261 -~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~--~~~~~~~~~~~---~~~~~l~~~l~~~g  332 (369)
T 3cq5_A          261 -HLSALSQAAAIVALRHS--ADTLGTVEKLSVERVRVAARLEELGYAVVP--SESNFVFFGDF---SDQHAAWQAFLDRG  332 (369)
T ss_dssp             -CSCHHHHHHHHHHHHTH--HHHHTHHHHHHHHHHHHHHHHHHHTCEEEC--CSSSEEEEECC---SSHHHHHHHHHHTT
T ss_pred             -CCCHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHHHHHHhCCCEECC--CCCeEEEEECC---CCHHHHHHHHHHCC
Confidence             46677777666666542  245678889999999999999988998874  45677788775   36777888888899


Q ss_pred             ceeccC---cccchhhh
Q psy10669        276 IACNKN---TGISLAAE  289 (337)
Q Consensus       276 I~v~~~---~girig~~  289 (337)
                      |.+.+.   ..+||+..
T Consensus       333 i~v~~~~~~~~iRis~~  349 (369)
T 3cq5_A          333 VLIRDVGIAGHLRTTIG  349 (369)
T ss_dssp             EECBCCSCTTEEEEECC
T ss_pred             EEEEECCCCCeEEEEeC
Confidence            999764   25777643

>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*

Probab=99.21  E-value=4.6e-10  Score=108.64  Aligned_cols=227  Identities=17%  Similarity=0.106  Sum_probs=144.2

Q ss_pred             ccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccch-HHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHh
Q psy10669         37 ASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQF-IDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEK  115 (337)
Q Consensus        37 asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~-~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~a  115 (337)
                      +....++|.+++++...+.+. ..+.  .....|... .++++    +.+++++|.++     .+.++||+.|+..++.+
T Consensus         9 p~~~~~~~~~~~a~~~~~~~~-~~~~--~~~~~g~~~l~~~l~----~~la~~~g~~~-----~i~~~~gt~al~~~~~~   76 (418)
T 2c81_A            9 PEWPQHSDRTRRKIEEVFQSN-RWAI--SGYWTGEESMERKFA----KAFADFNGVPY-----CVPTTSGSTALMLALEA   76 (418)
T ss_dssp             CCSSCCCHHHHHHHHHHHHHT-CCST--TSBCCSSCCHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHHhcC-Cccc--cCcccCCHHHHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHH
Confidence            445567899999998775542 1121  112334433 45565    57889999874     68888999999888899


Q ss_pred             h-CCc------------------------------------------ccc---cccEEEEcCcccccccChHHHHHHhhh
Q psy10669        116 A-LPT------------------------------------------NNA---RFDFLSSGTTCYSRCLDYARFRQICDE  149 (337)
Q Consensus       116 L-l~~------------------------------------------~~a---~pklII~~~S~~~~~~d~~~l~eia~~  149 (337)
                      + +++                                          +.+   ++++|++.. ..+...|+++|.++|++
T Consensus        77 ~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~-~~G~~~~~~~i~~~~~~  155 (418)
T 2c81_A           77 LGIGEGDEVIVPSLTWIATATAVLNVNALPVFVDVEADTYCIDPQLIKSAITDKTKAIIPVH-LFGSMANMDEINEIAQE  155 (418)
T ss_dssp             TTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCHHHHGGGCCTTEEEECCBC-CTTCCCCHHHHHHHHHH
T ss_pred             cCCCCcCEEEECCCccHhHHHHHHHcCCEEEEEecCCCCCCcCHHHHHHhhCCCCeEEEEeC-CcCCcccHHHHHHHHHH
Confidence            8 653                                          111   257777753 56788999999999999


Q ss_pred             cCCeEEEeccccccc-cc---------eeeee---cc-----CCchhhh---hHHHHHhhccCCCC--------------
Q psy10669        150 TDSIMFADMSHISGL-IA---------GVKGV---TK-----TGEKILY---DYEEKINNAVFPSL--------------  194 (337)
Q Consensus       150 ~ga~l~vD~AH~~Gl-i~---------g~~~T---~~-----~Gg~i~~---~l~~~i~~~~~p~~--------------  194 (337)
                      +|+++++|++|..|. +.         ..+.+   +|     .||+++.   ++.+.+.....++.              
T Consensus       156 ~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~s~s~~K~~~~g~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (418)
T 2c81_A          156 HNLFVIEDCAQSHGSVWNNQRAGTIGDIGAFSCQQGKVLTAGEGGIIVTKNPRLFELIQQLRADSRVYCDDSSELMHGDM  235 (418)
T ss_dssp             TTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCSSSCEEEEESCHHHHHHHHHHHBTTEEECSCGGGCCTTCB
T ss_pred             CCCEEEEECcccccCccCCEecccccceEEEeccCCcccCCCCeEEEEECCHHHHHHHHHHHHhCccccccccccccchh
Confidence            999999999999886 32         11222   22     3566664   35554443211111              


Q ss_pred             --------CCC--CcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCC-C--C-C-eEEEEEec
Q psy10669        195 --------QGG--PHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGG-T--D-V-HLILIDLR  258 (337)
Q Consensus       195 --------~g~--~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~-t--~-~-h~v~V~~~  258 (337)
                              .|-  ...+..+++..  ..+  ...+++.++..+++++|.+.|.+. |+++.... .  . . |++++.+.
T Consensus       236 ~~~~~~~~~g~~~~~~~~~aa~~~--~~l--~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~  311 (418)
T 2c81_A          236 QLVKKGDIQGSNYCLSEFQSAILL--DQL--QELDDKNAIREKNAMFLNDALSKIDGIKVMKRPPQVSRQTYYGYVFRFD  311 (418)
T ss_dssp             SEEECCSSCCCBCCCCHHHHHHHH--HHH--TTHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCTTEEECCCSEEEEEEC
T ss_pred             hccccccccCcCCCcCHHHHHHHH--HHH--HHHHHHHHHHHHHHHHHHHHhccCCCcccCCCCCCCcccccEEEEEEEc
Confidence                    000  01122222221  122  245678888889999999999885 88886321 1  1 2 56667776


Q ss_pred             C---CCcchHHHHHHHhhc-Cce---ecc
Q psy10669        259 K---NKLTGSKVELVLEEI-AIA---CNK  280 (337)
Q Consensus       259 ~---~~~~~~~~~~~L~~~-gI~---v~~  280 (337)
                      .   .+.+..++.+.|.+. ||.   +..
T Consensus       312 ~~~~~~~~~~~l~~~L~~~~gI~~~~v~~  340 (418)
T 2c81_A          312 PVKFGGLNADQFCEILREKLNMGTFYLHP  340 (418)
T ss_dssp             GGGTTTCCHHHHHHHHHHHHTCCTTTEEC
T ss_pred             cccccccCHHHHHHHHHHcCCCCcccccc
Confidence            4   255788888999887 999   664

>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1

Probab=99.20  E-value=2.1e-09  Score=103.70  Aligned_cols=235  Identities=10%  Similarity=-0.018  Sum_probs=142.7

Q ss_pred             ccceeeeccCCC--CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-c
Q psy10669         30 INGIELIASENF--TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-S  106 (337)
Q Consensus        30 ~~~i~l~asen~--~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t  106 (337)
                      +..|.|...++-  .+|.|.+++ ..+.+ ...+      |.......+++....+.+.+.+|.+...  .++.+++| +
T Consensus        43 ~~~i~l~~~~~~~~~~~~v~~a~-~~l~~-~~~~------y~~~~g~~~l~~~la~~~~~~~g~~~~~--~~v~~~~g~t  112 (409)
T 2gb3_A           43 VRIHHLNIGQPDLKTPEVFFERI-YENKP-EVVY------YSHSAGIWELREAFASYYKRRQRVDVKP--ENVLVTNGGS  112 (409)
T ss_dssp             CEEEECSSCCCCSCCCTHHHHHH-HHTCC-SSCC------CCCTTCCHHHHHHHHHHHHHTSCCCCCG--GGEEEESHHH
T ss_pred             CCEEeccCCCCCCCCCHHHHHHH-HHHhc-CCCC------CCCCCCcHHHHHHHHHHHHHHhCCCCCH--HHEEEeCCHH
Confidence            445677666654  378999999 76532 1112      2222223456543334444445532110  24556555 8


Q ss_pred             hhHHHHHHhhCCc-------------------------------c------cc--------cccEEEEc-Ccc-ccccc-
Q psy10669        107 PANFAVCEKALPT-------------------------------N------NA--------RFDFLSSG-TTC-YSRCL-  138 (337)
Q Consensus       107 ~AN~~v~~aLl~~-------------------------------~------~a--------~pklII~~-~S~-~~~~~-  138 (337)
                      .|+..++.+++++                               .      ..        ++++|++. .++ .+... 
T Consensus       113 ~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~l~~~~~~v~~~~p~nptG~~~~  192 (409)
T 2gb3_A          113 EAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAIPQNLESFINERTKGIVLSNPCNPTGVVYG  192 (409)
T ss_dssp             HHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCCCTTGGGGCCTTEEEEEEESSCTTTCCCCC
T ss_pred             HHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeccCCCCCCccHHHHHHhhCcCCeEEEECCCCCCCCCCcC
Confidence            8998888988654                               1      11        15666665 222 23443 


Q ss_pred             --ChHHHHHHhhhcCCeEEEeccccccccc--------------eeeeec-c----CC---chhhh---hHHHHHhhccC
Q psy10669        139 --DYARFRQICDETDSIMFADMSHISGLIA--------------GVKGVT-K----TG---EKILY---DYEEKINNAVF  191 (337)
Q Consensus       139 --d~~~l~eia~~~ga~l~vD~AH~~Gli~--------------g~~~T~-~----~G---g~i~~---~l~~~i~~~~~  191 (337)
                        ++++|.++|+++|++|++|++|+.+...              .++++. |    .|   |+++.   ++.+.+.....
T Consensus       193 ~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~l~~~l~~~~~  272 (409)
T 2gb3_A          193 KDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESDKVVVIDSVSKKFSACGARVGCLITRNEELISHAMKLAQ  272 (409)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCCTTEEEEEESTTTTTCGGGCCEEEECSCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCEEEEECcccccccCCCCCCccccCCCCEEEEecchhccCCccceEEEEEECcHHHHHHHHHHHh
Confidence              5778889999999999999999865431              122332 2    12   55554   46665554433


Q ss_pred             CCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEE-ecCCCCCeEEEEEecCCCcchHHHHHH
Q psy10669        192 PSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHV-VTGGTDVHLILIDLRKNKLTGSKVELV  270 (337)
Q Consensus       192 p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v-~~~~t~~h~v~V~~~~~~~~~~~~~~~  270 (337)
                      +..  +++++..+++..++... ....++.++++.++.++|.+.|.+.|+++ .. ...+..+++++.  +.+..++.+.
T Consensus       273 ~~~--~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~~~~~--~~~~~~l~~~  346 (409)
T 2gb3_A          273 GRL--APPLLEQIGSVGLLNLD-DSFFDFVRETYRERVETVLKKLEEHGLKRFTK-PSGAFYITAELP--VEDAEEFARW  346 (409)
T ss_dssp             HSC--CCCHHHHHHHHHHHTCC-HHHHHHHHHHHHHHHHHHHHHHHHTTCCCBCC-CSBSSEEEEECS--SSCHHHHHHH
T ss_pred             ccC--CCCHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHHcCceeeeC-CCeeEEEEEEeC--CCCHHHHHHH
Confidence            332  56667777666666332 23456778899999999999999989887 53 233556667775  4467778777


Q ss_pred             Hhhc------Cceecc
Q psy10669        271 LEEI------AIACNK  280 (337)
Q Consensus       271 L~~~------gI~v~~  280 (337)
                      |.+.      ||.+.+
T Consensus       347 l~~~~~~~~~gi~v~~  362 (409)
T 2gb3_A          347 MLTDFNMDGETTMVAP  362 (409)
T ss_dssp             HHHSCCBTTEEEECEE
T ss_pred             HHhccccccCcEEEeC
Confidence            7754      999875

>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1

Probab=99.20  E-value=1e-09  Score=104.61  Aligned_cols=256  Identities=11%  Similarity=0.075  Sum_probs=151.6

Q ss_pred             hhhcHHHHHHHHHHHhhcccceeeeccCCC--CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhc
Q psy10669         12 AQTDPELYSLIKKEKHRQINGIELIASENF--TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAF   89 (337)
Q Consensus        12 ~~~d~~~~~~~~~e~~rq~~~i~l~asen~--~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lf   89 (337)
                      ....+.++..+.+-.. +...|.|...++-  .+|.|.+++...+.+. ..+++      ...-..+++....+.+++.+
T Consensus        13 ~~~~~~~~~~~~~~~~-~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~------~~~g~~~l~~~la~~l~~~~   84 (386)
T 1u08_A           13 PQLGTTIFTQMSALAQ-QHQAINLSQGFPDFDGPRYLQERLAHHVAQG-ANQYA------PMTGVQALREAIAQKTERLY   84 (386)
T ss_dssp             CCCCCCHHHHHHHHHH-HTTCEECCCSSCSSCCCHHHHHHHHHHHHTT-CCSCC------CTTCCHHHHHHHHHHHHHHH
T ss_pred             hcCCccHHHHHHHHHh-cCCeEEecCCCCCCCCCHHHHHHHHHHHHhh-ccCCC------CCCCCHHHHHHHHHHHHHHh
Confidence            3334444444433222 2346777665543  4799999998765431 11221      11113455544445556667


Q ss_pred             CCC-CCCCcceeecCCC-chhHHHHHHhhCCc-------------------------------c---------c--c---
Q psy10669         90 NLD-PEQWGCNVQPYSG-SPANFAVCEKALPT-------------------------------N---------N--A---  122 (337)
Q Consensus        90 g~~-~~~~~~~v~~~Sg-t~AN~~v~~aLl~~-------------------------------~---------~--a---  122 (337)
                      |.+ .+++  +|.+++| ++|+..++.+++++                               .         +  +   
T Consensus        85 g~~~~~~~--~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~  162 (386)
T 1u08_A           85 GYQPDADS--DITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQPPHFRVDWQEFAALLSE  162 (386)
T ss_dssp             SCCCCTTT--TEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCTTTCCCCHHHHHHHCCT
T ss_pred             CCCCCCCC--CEEEcCChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEeecCcccCcCCHHHHHHhhcc
Confidence            753 2211  4666666 78888888888654                               0         0  0   


Q ss_pred             cccEEEEcCcc--cccccC---hHHHHHHhhhcCCeEEEeccccccccc-----------------eeeeec-c----CC
Q psy10669        123 RFDFLSSGTTC--YSRCLD---YARFRQICDETDSIMFADMSHISGLIA-----------------GVKGVT-K----TG  175 (337)
Q Consensus       123 ~pklII~~~S~--~~~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~-----------------g~~~T~-~----~G  175 (337)
                      ++++|++..-.  .+...|   +++|.++|+++|+++++|++|......                 .++++. |    .|
T Consensus       163 ~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G  242 (386)
T 1u08_A          163 RTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTG  242 (386)
T ss_dssp             TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGG
T ss_pred             cCEEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhhcCCcc
Confidence            25777775222  245554   577889999999999999999863221                 112232 2    12


Q ss_pred             ---chhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCC
Q psy10669        176 ---EKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDV  250 (337)
Q Consensus       176 ---g~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~  250 (337)
                         |+++.  ++.+.+....... ..+++.+..+++..++... ....++.++++.++.++|.+.|.+.|+++... ..+
T Consensus       243 ~r~G~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~g  319 (386)
T 1u08_A          243 WKVGYCVAPAPISAEIRKVHQYL-TFSVNTPAQLALADMLRAE-PEHYLALPDFYRQKRDILVNALNESRLEILPC-EGT  319 (386)
T ss_dssp             GCCEEEECCHHHHHHHHHHHHHH-TSSCCHHHHHHHHHHHHHC-THHHHTHHHHHHHHHHHHHHHTTSSSCEECCC-CBS
T ss_pred             cceEEEEcCHHHHHHHHHHHHhh-ccCCChHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHHHHCCCeecCC-Cce
Confidence               55554  4655555432111 1244556666666666654 33456788899999999999999889988642 335


Q ss_pred             eEEEEEecCCC-cchHHHHHHHh-hcCceecc
Q psy10669        251 HLILIDLRKNK-LTGSKVELVLE-EIAIACNK  280 (337)
Q Consensus       251 h~v~V~~~~~~-~~~~~~~~~L~-~~gI~v~~  280 (337)
                      ..+++++...+ .+..++.+.|. +.||.+.+
T Consensus       320 ~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~  351 (386)
T 1u08_A          320 YFLLVDYSAVSTLDDVEFCQWLTQEHGVAAIP  351 (386)
T ss_dssp             SEEEEECTTTCCSCHHHHHHHHHHHSCEECEE
T ss_pred             EEEEEecCCCCCCCHHHHHHHHHHhCCEEEeC
Confidence            67788886531 35677777664 68999874

>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*

Probab=99.20  E-value=2.8e-10  Score=110.74  Aligned_cols=245  Identities=10%  Similarity=0.039  Sum_probs=139.4

Q ss_pred             ceeeeccCCCC-CHHHHHHHhhhhhhcc--CCCCCCCcC---cCccchHHHHHHHHHHHHHhhcC--------CCCCCCc
Q psy10669         32 GIELIASENFT-SLAVLECLGSCLQNKY--SEGLPGKRY---YGGNQFIDEIEIVAQQRSLKAFN--------LDPEQWG   97 (337)
Q Consensus        32 ~i~l~asen~~-~p~V~~a~~~~l~~~y--~~g~~g~r~---~~G~~~~~~lE~~~~~~~a~lfg--------~~~~~~~   97 (337)
                      -|+|-.++|.. .+.+.+++........  ..|..+.|.   |....-..+++    +.++++++        ++.    
T Consensus        40 ~i~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~g~~~l~----~~la~~~~~~~~~~~~~~~----  111 (435)
T 3piu_A           40 IIQMGLAENQLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFK----KAMVDFMAEIRGNKVTFDP----  111 (435)
T ss_dssp             BEECSSCCCCSSHHHHHHHHHHCTTGGGTEETTEECHHHHHHCCCTTCCHHHH----HHHHHHHHHHTTTSSCCCG----
T ss_pred             eEEeccccccccHHHHHHHHHhCccccccccccccccccccccCCCCCcHHHH----HHHHHHHHHhhCCCCCCCH----
Confidence            67888888877 5556666544221110  012222222   22222234555    35555555        333    


Q ss_pred             ceeecCCC-chhHHHHHHhhCCc--------------------------------------------cc---------cc
Q psy10669         98 CNVQPYSG-SPANFAVCEKALPT--------------------------------------------NN---------AR  123 (337)
Q Consensus        98 ~~v~~~Sg-t~AN~~v~~aLl~~--------------------------------------------~~---------a~  123 (337)
                      .++.+++| ++||..++.+++++                                            +.         .+
T Consensus       112 ~~v~~~~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~  191 (435)
T 3piu_A          112 NHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLR  191 (435)
T ss_dssp             GGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCC
T ss_pred             HHEEEcCChHHHHHHHHHHhcCCCCeEEECCCccccHHHHHHHhcCCEEEEeeCCCccCCcCCHHHHHHHHHHHHhcCCC
Confidence            24666555 78999999999754                                            00         02


Q ss_pred             ccEEEEc-Ccc-cccccC---hHHHHHHhhhcCCeEEEeccccccccce--------------------------eeeec
Q psy10669        124 FDFLSSG-TTC-YSRCLD---YARFRQICDETDSIMFADMSHISGLIAG--------------------------VKGVT  172 (337)
Q Consensus       124 pklII~~-~S~-~~~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~g--------------------------~~~T~  172 (337)
                      +++|++. +++ .+...+   +++|.++|+++|++|++|++|..+..++                          +++|.
T Consensus       192 ~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~  271 (435)
T 3piu_A          192 VKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSL  271 (435)
T ss_dssp             EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEEEEES
T ss_pred             eEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcCHHHhccccccccccCCCCCEEEEEee
Confidence            4666554 322 234444   4667788999999999999998754431                          13343


Q ss_pred             cC-----C---chhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHH--hchhhHHHHHHHHHHHHHHHHHHHhC
Q psy10669        173 KT-----G---EKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQA--QSDEFKSYQAQVKANASHLSDEMIKR  239 (337)
Q Consensus       173 ~~-----G---g~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~--~~~~~~~y~~~v~~na~~l~~~L~~~  239 (337)
                      .|     |   |+++.   ++.+.++....+   ++.+++..++++..+...  .....++.++++.++.++|.+.|.+.
T Consensus       272 sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  348 (435)
T 3piu_A          272 SKDLGLPGFRVGAIYSNDDMVVAAATKMSSF---GLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKS  348 (435)
T ss_dssp             SSSSCCGGGCEEEEEESCHHHHHHHHHHGGG---SCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ecccCCCceeEEEEEeCCHHHHHHHHHHhhc---CCCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            22     2   55554   355555543222   233444444444444321  12233677888999999999999999


Q ss_pred             CCEEecCCCCCeEEEEEecCCCc-----chHHHHHHH-hhcCceeccCc--------ccchhh
Q psy10669        240 GYHVVTGGTDVHLILIDLRKNKL-----TGSKVELVL-EEIAIACNKNT--------GISLAA  288 (337)
Q Consensus       240 G~~v~~~~t~~h~v~V~~~~~~~-----~~~~~~~~L-~~~gI~v~~~~--------girig~  288 (337)
                      |+++..+ ..+.++++++.....     +..++.+.| +++||.+.+-.        .+||+.
T Consensus       349 g~~~~~~-~~g~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~  410 (435)
T 3piu_A          349 GISCLNG-NAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCF  410 (435)
T ss_dssp             TCEECCC-CSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEEC
T ss_pred             CCcccCC-CeeEEEEEEcccccccCCchhHHHHHHHHHHHCCEEEeCCcccCCCCCCEEEEEe
Confidence            9988752 334678888865210     234455555 45699988632        477764

>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*

Probab=99.20  E-value=1.2e-10  Score=112.13  Aligned_cols=225  Identities=14%  Similarity=0.108  Sum_probs=143.6

Q ss_pred             ccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhH
Q psy10669         30 INGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPAN  109 (337)
Q Consensus        30 ~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN  109 (337)
                      ...|.+.+.++..+|.|++++...+.+.        +|..+ ....+++    +.+++++|.++     .+.++||+.|+
T Consensus        30 ~~~id~~~~~~~~~~~v~~a~~~~~~~~--------~y~~~-~~~~~l~----~~la~~~~~~~-----~v~~~~Gt~a~   91 (399)
T 2oga_A           30 VPFLDLKAAYEELRAETDAAIARVLDSG--------RYLLG-PELEGFE----AEFAAYCETDH-----AVGVNSGMDAL   91 (399)
T ss_dssp             BCSCCHHHHHHHTHHHHHHHHHHHHHHT--------CCSSS-HHHHHHH----HHHHHHTTSSE-----EEEESCHHHHH
T ss_pred             CcccccCcCCCCCCHHHHHHHHHHHhcC--------CCCCc-hhHHHHH----HHHHHHHCCCe-----EEEecCHHHHH
Confidence            3557777777777899999998765431        22222 3334554    68899999874     57888899999


Q ss_pred             HHHHHhh-CCc-------------------------------c---------c----c-cccEEEEcCcccccccChHHH
Q psy10669        110 FAVCEKA-LPT-------------------------------N---------N----A-RFDFLSSGTTCYSRCLDYARF  143 (337)
Q Consensus       110 ~~v~~aL-l~~-------------------------------~---------~----a-~pklII~~~S~~~~~~d~~~l  143 (337)
                      ..++.++ +++                               .         +    . ++++|++. ...+...|+++|
T Consensus        92 ~~~l~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~-n~tG~~~~l~~i  170 (399)
T 2oga_A           92 QLALRGLGIGPGDEVIVPSHTYIASWLAVSATGATPVPVEPHEDHPTLDPLLVEKAITPRTRALLPV-HLYGHPADMDAL  170 (399)
T ss_dssp             HHHHHHTTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCSSSSSBCHHHHHHHCCTTEEEECCB-CGGGCCCCHHHH
T ss_pred             HHHHHHhCCCCcCEEEECCCccHHHHHHHHHCCCEEEEEecCCCCCCcCHHHHHHhcCCCCeEEEEe-CCcCCccCHHHH
Confidence            8888998 654                               0         0    0 25777764 456788899999


Q ss_pred             HHHhhhcCCeEEEeccccccccc----------eeeeec---c------CCchhhh---hHHHHHhhccCCC--------
Q psy10669        144 RQICDETDSIMFADMSHISGLIA----------GVKGVT---K------TGEKILY---DYEEKINNAVFPS--------  193 (337)
Q Consensus       144 ~eia~~~ga~l~vD~AH~~Gli~----------g~~~T~---~------~Gg~i~~---~l~~~i~~~~~p~--------  193 (337)
                      .++|+++|+++++|++|..|...          .+++++   |      .||++++   ++.+.+.....++        
T Consensus       171 ~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~di~~~S~~~sK~~~~~G~~g~~~~~~~~~~~~l~~~~~~g~~~~~~~~  250 (399)
T 2oga_A          171 RELADRHGLHIVEDAAQAHGARYRGRRIGAGSSVAAFSFYPGKNLGCFGDGGAVVTGDPELAERLRMLRNYGSRQKYSHE  250 (399)
T ss_dssp             HHHHHHHTCEECEECTTCTTCEETTEETTCTTCEEEEECCTTSSSCCSSCCEEEEESCHHHHHHHHHHHBTTCSSTTCCC
T ss_pred             HHHHHHcCCEEEEECcccccCccCCeecccccCEEEEeCCCCccCCcCCceEEEEeCCHHHHHHHHHHHhcCcccccccc
Confidence            99999999999999999988532          123332   2      3566654   4555554322221        


Q ss_pred             ---CCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCC-CeEE-EEEecCCCcchHHH
Q psy10669        194 ---LQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTD-VHLI-LIDLRKNKLTGSKV  267 (337)
Q Consensus       194 ---~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~-~h~v-~V~~~~~~~~~~~~  267 (337)
                         ...++++...+++..++..     ++++.++..++++++.+.|.+. |+++...... +++. .+.+..  .+..++
T Consensus       251 ~~g~~~~~~~~~~a~~~~~l~~-----~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~l  323 (399)
T 2oga_A          251 TKGTNSRLDEMQAAVLRIRLAH-----LDSWNGRRSALAAEYLSGLAGLPGIGLPVTAPDTDPVWHLFTVRT--ERRDEL  323 (399)
T ss_dssp             SCCCBCCCCHHHHHHHHHHHHT-----HHHHHHHHHHHHHHHHHHTTTCTTCBCCCCCTTEECCCSSEEEEC--SSHHHH
T ss_pred             ccccCCCcCHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCcceeEEEEEEC--CCHHHH
Confidence               1123344444444444433     3456777888899999999884 8876532122 2221 122221  257788


Q ss_pred             HHHHhhcCceecc
Q psy10669        268 ELVLEEIAIACNK  280 (337)
Q Consensus       268 ~~~L~~~gI~v~~  280 (337)
                      .+.|.+.||.+..
T Consensus       324 ~~~L~~~gI~v~~  336 (399)
T 2oga_A          324 RSHLDARGIDTLT  336 (399)
T ss_dssp             HHHHHHTTBCCBC
T ss_pred             HHHHHHCCCceec
Confidence            8889889999875

>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}

Probab=99.20  E-value=1.5e-10  Score=111.52  Aligned_cols=214  Identities=11%  Similarity=0.055  Sum_probs=134.7

Q ss_pred             CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHH-HhhcC-CCCCCCcceeecCCCchhHHHHHHhh-CCc
Q psy10669         43 SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRS-LKAFN-LDPEQWGCNVQPYSGSPANFAVCEKA-LPT  119 (337)
Q Consensus        43 ~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~-a~lfg-~~~~~~~~~v~~~Sgt~AN~~v~~aL-l~~  119 (337)
                      +|.+++++...+.+.+        ++.....+.++|    +++ ++++| .++     .+.++||+.|+..++.++ +++
T Consensus        15 ~~~i~~a~~~~~~~~~--------~~~~~~~~~~l~----~~~~a~~~g~~~~-----~v~~~sgt~al~~al~~l~~~~   77 (377)
T 3ju7_A           15 VIEYLDELKEIDASHI--------YTNYGPINQRFE----QTIMSGFFQNRGA-----VTTVANATLGLMAAIQLKKRKK   77 (377)
T ss_dssp             GGGGHHHHHHHHHHTC--------CSSSCHHHHHHH----HHHHHHTSTTCSE-----EEEESCHHHHHHHHHHHHSCTT
T ss_pred             cHHHHHHHHHHHHcCC--------cccCCHHHHHHH----HHHHHHHhCCCCe-----EEEeCCHHHHHHHHHHHcCCCC
Confidence            5677888877655421        111123456776    577 99999 553     688889999988888887 553


Q ss_pred             -------------------------------------------c-c--cc--ccEEEEcCcccccccChHHHHHHhhhcC
Q psy10669        120 -------------------------------------------N-N--AR--FDFLSSGTTCYSRCLDYARFRQICDETD  151 (337)
Q Consensus       120 -------------------------------------------~-~--a~--pklII~~~S~~~~~~d~~~l~eia~~~g  151 (337)
                                                                 + +  .+  +|+|+.. ..++...|+++|.++|+ +|
T Consensus        78 Gd~Vi~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~tk~v~~~-~~~G~~~~~~~i~~la~-~~  155 (377)
T 3ju7_A           78 GKYALMPSFTFPATPLAAIWCGLEPYFIDISIDDWYMDKTVLWDKIEELKEEVAIVVPY-ATFGSWMNLEEYEELEK-KG  155 (377)
T ss_dssp             CCEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCHHHHHHHHHHHGGGEEEECCB-CGGGBCCCCHHHHHHHH-TT
T ss_pred             cCEEEECCCCcHHHHHHHHHcCCEEEEEecCCccCCcCHHHHHHHHhcCCCCceEEEEE-CCCCCccCHHHHHHHHh-cC
Confidence                                                       1 1  13  5677754 35789999999999999 99


Q ss_pred             CeEEEeccccccccc------------eeeee--cc-----CCchhhh---hHHHHHhhccCCCC----------CCCCc
Q psy10669        152 SIMFADMSHISGLIA------------GVKGV--TK-----TGEKILY---DYEEKINNAVFPSL----------QGGPH  199 (337)
Q Consensus       152 a~l~vD~AH~~Gli~------------g~~~T--~~-----~Gg~i~~---~l~~~i~~~~~p~~----------~g~~~  199 (337)
                      +++++|++|..|...            .+.|.  +|     .||++++   ++.++++.....+.          .+...
T Consensus       156 ~~vi~D~a~a~g~~~~~~~~g~~~~d~~~~S~~~~K~l~~g~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~  235 (377)
T 3ju7_A          156 VPVVVDAAPGFGLMNGGMHYGQDFSGMIIYSFHATKPFGIGEGGLIYSKNEEDIQRIKRMGNFGFDTNRECTMMGFNCKM  235 (377)
T ss_dssp             CCBEEECTTCTTCEETTEETTTTCSSEEEEECBTTSSSCCBSCEEEEESCHHHHHHHHHHTBTTBCTTSCBCSSCCBCCC
T ss_pred             CEEEEECCCccCCeECCEeccCCCCcEEEEECCCCCcCCCCCcEEEEECCHHHHHHHHHHHhcCCCCCCceeeccccCCC
Confidence            999999999987532            12221  12     3677765   46665554322221          01111


Q ss_pred             HHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC---CEEec--CCCCCeE-EEEEecCCCcchHHHHHHHhh
Q psy10669        200 NHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG---YHVVT--GGTDVHL-ILIDLRKNKLTGSKVELVLEE  273 (337)
Q Consensus       200 ~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G---~~v~~--~~t~~h~-v~V~~~~~~~~~~~~~~~L~~  273 (337)
                      .+..|+++.+  .+  ...+++.++..+|++++.+.|.+.+   ..+..  +....|. +++.+.. +.+..++.+.|.+
T Consensus       236 ~~~~aa~~~~--~l--~~l~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~L~~  310 (377)
T 3ju7_A          236 SEYAAAIGIA--TM--KKWDDKLKERTRISEWYKQLLQSNGLMKKGWQLQKTEAVIQQFMPILCPE-EVRNKQVIEDLKK  310 (377)
T ss_dssp             CHHHHHHHHH--HH--HTHHHHHHHHHHHHHHHHHHHHHTTTTTTTCBCCCCSCBCCSSEEEECCT-TSCHHHHHHHHHT
T ss_pred             CHHHHHHHHH--HH--HHHHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCcceEEEEEEEeCC-hhhHHHHHHHHHH
Confidence            2223333222  22  3456788899999999999999865   22222  1233444 3454433 3357889999999


Q ss_pred             cCceecc
Q psy10669        274 IAIACNK  280 (337)
Q Consensus       274 ~gI~v~~  280 (337)
                      .||.++.
T Consensus       311 ~gI~~~~  317 (377)
T 3ju7_A          311 QKIEARL  317 (377)
T ss_dssp             TTBCCBC
T ss_pred             CCCceec
Confidence            9998875

>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*

Probab=99.20  E-value=3e-10  Score=106.51  Aligned_cols=232  Identities=17%  Similarity=0.197  Sum_probs=134.3

Q ss_pred             eeeeccCCCC-CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHH
Q psy10669         33 IELIASENFT-SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFA  111 (337)
Q Consensus        33 i~l~asen~~-~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~  111 (337)
                      |.+-.++|.. +|.+++++.....        +...|.......+++    +++++++|.++     .+.++||+.||..
T Consensus         6 i~~~~~~~~~p~~~~~~a~~~~~~--------~~~~y~~~~~~~~l~----~~la~~~g~~~-----~~~~~~gt~a~~~   68 (347)
T 1jg8_A            6 IDLRSDTVTKPTEEMRKAMAQAEV--------GDDVYGEDPTINELE----RLAAETFGKEA-----ALFVPSGTMGNQV   68 (347)
T ss_dssp             EECSCGGGCCCCHHHHHHHHTCCC--------CCGGGTCCHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHH
T ss_pred             EEeccccCCCCCHHHHHHHhcCCC--------CCcccCCChHHHHHH----HHHHHHhCCce-----EEEecCcHHHHHH
Confidence            3444555544 7889888864311        111233333445565    68889999874     5777888999988


Q ss_pred             HHHhhCCc---------------------------------------------ccc-------cccEEEEcCcc--c-cc
Q psy10669        112 VCEKALPT---------------------------------------------NNA-------RFDFLSSGTTC--Y-SR  136 (337)
Q Consensus       112 v~~aLl~~---------------------------------------------~~a-------~pklII~~~S~--~-~~  136 (337)
                      ++.+++++                                             .+.       ++++|++....  . +.
T Consensus        69 ~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~  148 (347)
T 1jg8_A           69 SIMAHTQRGDEVILEADSHIFWYEVGAMAVLSGVMPHPVPGKNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGR  148 (347)
T ss_dssp             HHHHHCCTTCEEEEETTCHHHHSSTTHHHHHTCCEEEEECEETTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSB
T ss_pred             HHHHhcCCCCEEEEcCcchhhhccccchhhccCeEEEEecCCCCccCHHHHHHHhccccccccCceEEEEeccccccCCc
Confidence            88888654                                             001       24677765323  2 55


Q ss_pred             ccCh---HHHHHHhhhcCCeEEEecccccccc---c-----------eeeeecc------CCchhhh--hHHHHHhhccC
Q psy10669        137 CLDY---ARFRQICDETDSIMFADMSHISGLI---A-----------GVKGVTK------TGEKILY--DYEEKINNAVF  191 (337)
Q Consensus       137 ~~d~---~~l~eia~~~ga~l~vD~AH~~Gli---~-----------g~~~T~~------~Gg~i~~--~l~~~i~~~~~  191 (337)
                      ..|.   ++|.++|+++|+++++|+||..|.+   +           .+.++.+      .|++++.  ++.+++.....
T Consensus       149 ~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~~G~~~~~~~~~~~~~~~~~~  228 (347)
T 1jg8_A          149 VVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYADSVMFCLSKGLCAPVGSVVVGDRDFIERARKARK  228 (347)
T ss_dssp             CCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHTCSEEEEESSSTTCCSSCEEEEECHHHHHHHHHHHH
T ss_pred             cCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhcccccEEEEecccccCCCceEEEEcCHHHHHHHHHHHH
Confidence            5544   5677899999999999999854321   1           1222332      3545543  35444332100


Q ss_pred             CCCCCCCcHH-HHHHH-HHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHH
Q psy10669        192 PSLQGGPHNH-AIGAI-ATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVEL  269 (337)
Q Consensus       192 p~~~g~~~~~-~iaal-a~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~  269 (337)
                       ...++.... ..+++ ..++...     .+..++..++.+++.+.|.+.|+++......++++++.+...+.+..++.+
T Consensus       229 -~~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (347)
T 1jg8_A          229 -MLGGGMRQAGVLAAAGIIALTKM-----VDRLKEDHENARFLALKLKEIGYSVNPEDVKTNMVILRTDNLKVNAHGFIE  302 (347)
T ss_dssp             -HHTCCCSSTHHHHHHHHHHHHHS-----STTHHHHHHHHHHHHHHHHHHTCBCCGGGCCSSEEEEECTTSSSCHHHHHH
T ss_pred             -HcCCchhHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHhcCceeccCCCcceEEEEEcccccCCHHHHHH
Confidence             011122211 12222 2233332     122345567889999999887887632224567788887643557788888


Q ss_pred             HHhhcCceeccCc--ccchh
Q psy10669        270 VLEEIAIACNKNT--GISLA  287 (337)
Q Consensus       270 ~L~~~gI~v~~~~--girig  287 (337)
                      .|.+.||.+....  .+||.
T Consensus       303 ~l~~~gi~v~~~~~~~iRl~  322 (347)
T 1jg8_A          303 ALRNSGVLANAVSDTEIRLV  322 (347)
T ss_dssp             HHHHHTEECEEEETTEEEEE
T ss_pred             HHHHCCCEEecCCCCeEEEE
Confidence            8888899987532  47775

>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*

Probab=99.19  E-value=2.2e-09  Score=105.36  Aligned_cols=254  Identities=11%  Similarity=0.002  Sum_probs=157.5

Q ss_pred             HHHHHHHHHHHhhccc-ce---eeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCC
Q psy10669         16 PELYSLIKKEKHRQIN-GI---ELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNL   91 (337)
Q Consensus        16 ~~~~~~~~~e~~rq~~-~i---~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~   91 (337)
                      .++++.+.+....... ..   ..++  .+.+|.+.+++...+.. ...+      +.......++|..+++.+++++|.
T Consensus        26 ~~v~~~~~~~~~~~~~~~~~~~~f~~--~~~~~~v~e~~~~a~~~-~~~~------~~~~~~~~~l~~~~~~~la~l~g~   96 (452)
T 2dgk_A           26 DVAFQIINDELYLDGNARQNLATFCQ--TWDDENVHKLMDLSINK-NWID------KEEYPQSAAIDLRCVNMVADLWHA   96 (452)
T ss_dssp             HHHHHHHHHHGGGSCCCTTBCSCCSC--CCCCHHHHHHHHHTTTC-BTTC------TTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHhcCCCCCccCCCCeeC--CCchHHHHHHHHHHhcc-CCCC------hhhChhHHHHHHHHHHHHHHHhCC
Confidence            4677777765533222 11   1222  46789999998765432 1111      112234568888888999999999


Q ss_pred             CCCC--CcceeecCC-CchhHHHHHHhhC---------------Cc----------------------------c-----
Q psy10669         92 DPEQ--WGCNVQPYS-GSPANFAVCEKAL---------------PT----------------------------N-----  120 (337)
Q Consensus        92 ~~~~--~~~~v~~~S-gt~AN~~v~~aLl---------------~~----------------------------~-----  120 (337)
                      +...  + ..+.+++ ||.||+.++.++.               ++                            .     
T Consensus        97 ~~~~~~~-~~~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~~h~~~~~~~~~~G~~v~~v~~~~~~~~~  175 (452)
T 2dgk_A           97 PAPKNGQ-AVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGPVQICWHKFARYWDVELREIPMRPGQLFM  175 (452)
T ss_dssp             CCCTTSC-CEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESSCCHHHHHHHHHTTCEEEECCCBTTBCSC
T ss_pred             CcccccC-CceEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEECCCcHHHHHHHHHcCceEEEEecCCCCCeE
Confidence            8642  1 1244544 4889877766552               11                            0     


Q ss_pred             ----c--c---cccEEEEcCcc--cccccChHHHHHHhhhc------CCeEEEeccccccccc-------------e---
Q psy10669        121 ----N--A---RFDFLSSGTTC--YSRCLDYARFRQICDET------DSIMFADMSHISGLIA-------------G---  167 (337)
Q Consensus       121 ----~--a---~pklII~~~S~--~~~~~d~~~l~eia~~~------ga~l~vD~AH~~Gli~-------------g---  167 (337)
                          +  +   +|++|++...+  .+...|+++|.++|+++      |++++||+||..++..             +   
T Consensus       176 d~~~l~~~i~~~t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~  255 (452)
T 2dgk_A          176 DPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKS  255 (452)
T ss_dssp             CHHHHHHHCCTTEEEEECBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEE
T ss_pred             CHHHHHHHHhhCCEEEEEEcCCcCCcccCCHHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccchhhcCCCCCcE
Confidence                0  0   26777776433  46888999999999996      9999999999887531             1   


Q ss_pred             eeeeccC-------Cchhhh-h--H-HHHHhh-ccCC-------CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHH
Q psy10669        168 VKGVTKT-------GEKILY-D--Y-EEKINN-AVFP-------SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKAN  228 (337)
Q Consensus       168 ~~~T~~~-------Gg~i~~-~--l-~~~i~~-~~~p-------~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~n  228 (337)
                      ++++.||       .|+++. +  + .+.+.. .-+.       .+.++......+++..++..+....+++..++..++
T Consensus       256 ~~~~~hK~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~aal~~lg~~g~~~~~~~~~~~  335 (452)
T 2dgk_A          256 ISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQV  335 (452)
T ss_dssp             EEEETTTTTCCCSSCEEEEESSGGGSCGGGCEEECCTTCCEEECCSCCSCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEECcccccCCCCCeEEEEEcCHHHHHHHhccCccccCCCCCCcccCCCChhHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence            2233232       244443 2  2 122211 1111       123444444556666666655445678889999999


Q ss_pred             HHHHHHHHHhC-CCEEecCC---CCCeEEEEEecCC---CcchHHHHHHHhhcCceec
Q psy10669        229 ASHLSDEMIKR-GYHVVTGG---TDVHLILIDLRKN---KLTGSKVELVLEEIAIACN  279 (337)
Q Consensus       229 a~~l~~~L~~~-G~~v~~~~---t~~h~v~V~~~~~---~~~~~~~~~~L~~~gI~v~  279 (337)
                      +++|.+.|.+. |++++..+   ...+++.+.+...   +++..++.+.|.+.||.+.
T Consensus       336 a~~l~~~L~~~~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~l~~~L~~~Gi~v~  393 (452)
T 2dgk_A          336 AAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVP  393 (452)
T ss_dssp             HHHHHHHHHTTSSEEEEEECCTTTBSSEEEEEECTTCCCSCCHHHHHHHHHHTTCBCC
T ss_pred             HHHHHHHHHhCCCeEEecCCCCCCCeEEEEEEecCcccccCCHHHHHHHHHhcCCeee
Confidence            99999999996 59987532   3556777766542   2455788899988899654

>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*

Probab=99.19  E-value=7.3e-10  Score=106.86  Aligned_cols=264  Identities=11%  Similarity=0.076  Sum_probs=156.2

Q ss_pred             hhhhhhhhcHHHHHHHHHHHhhcccceeeeccCCC--CCHHHHHHHhhhhhhcc-CCCCCCCcCcCccchHHHHHHHHHH
Q psy10669          7 LHGTLAQTDPELYSLIKKEKHRQINGIELIASENF--TSLAVLECLGSCLQNKY-SEGLPGKRYYGGNQFIDEIEIVAQQ   83 (337)
Q Consensus         7 ~~~~l~~~d~~~~~~~~~e~~rq~~~i~l~asen~--~~p~V~~a~~~~l~~~y-~~g~~g~r~~~G~~~~~~lE~~~~~   83 (337)
                      +.+.+...++..+.-+.+. ..+...|+|-..++-  .+|.|.+++...+.... ..+++..   .|   ..++.....+
T Consensus         6 ~~~~~~~~~~~~~~~~~~~-~~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~---~g---~~~lr~~la~   78 (422)
T 3fvs_A            6 QARRLDGIDYNPWVEFVKL-ASEHDVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKT---FG---YPPLTKILAS   78 (422)
T ss_dssp             SCGGGTTCCCCHHHHHHHH-HHTSCCEECCCSSCSSCCCHHHHHHHHHHHHSCGGGGSCCCT---TC---CHHHHHHHHH
T ss_pred             HHHHhhccCccHHHHHHHH-hhcCCceEeCCCCCCCCCCHHHHHHHHHHHhCCCccCCCCCC---CC---CHHHHHHHHH
Confidence            3455666666544333322 223466777776665  48999999987654321 1122211   12   2344433334


Q ss_pred             HHHhhcCCCCCCCcceeecCCC-chhHHHHHHhhCCc-------------------------------c-----------
Q psy10669         84 RSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEKALPT-------------------------------N-----------  120 (337)
Q Consensus        84 ~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~aLl~~-------------------------------~-----------  120 (337)
                      .+.+.+|.+-.. ..+|.+++| +.|+..++.+++++                               .           
T Consensus        79 ~~~~~~g~~~~~-~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~G~~~~~  157 (422)
T 3fvs_A           79 FFGELLGQEIDP-LRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSS  157 (422)
T ss_dssp             HHHHHHTCCCCH-HHHEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCCCSSSCCBG
T ss_pred             HHHHhhCCCCCC-CCcEEEECChHHHHHHHHHHHcCCCCEEEEcCCCchhhHHHHHHcCCEEEEEecccccccccccccc
Confidence            556666654210 014666666 78888888888654                               1           


Q ss_pred             ----cc----------cccEEEEcCcc--ccccc---ChHHHHHHhhhcCCeEEEeccccccccc---------------
Q psy10669        121 ----NA----------RFDFLSSGTTC--YSRCL---DYARFRQICDETDSIMFADMSHISGLIA---------------  166 (337)
Q Consensus       121 ----~a----------~pklII~~~S~--~~~~~---d~~~l~eia~~~ga~l~vD~AH~~Gli~---------------  166 (337)
                          .-          ++++|++..-.  .+...   ++++|.++|+++|+++++|++|......               
T Consensus       158 ~~~~~d~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~  237 (422)
T 3fvs_A          158 SNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWE  237 (422)
T ss_dssp             GGSBCCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGG
T ss_pred             cCCCCCHHHHHhhcCCCceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhcccccC
Confidence                00          14666665223  24555   5778889999999999999999753322               


Q ss_pred             --eeeeec-c----CC---chhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHH------hchhhHHHHHHHHHH
Q psy10669        167 --GVKGVT-K----TG---EKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQA------QSDEFKSYQAQVKAN  228 (337)
Q Consensus       167 --g~~~T~-~----~G---g~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~------~~~~~~~y~~~v~~n  228 (337)
                        .+.++. |    .|   |+++.  ++.+.+..... ....+++++..+++..++...      .....++.++++.++
T Consensus       238 ~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  316 (422)
T 3fvs_A          238 RTLTIGSAGKTFSATGWKVGWVLGPDHIMKHLRTVHQ-NSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRC  316 (422)
T ss_dssp             GEEEEEEHHHHHTCGGGCCEEEECCHHHHHHHHHHHH-TTTCCCCHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHHHHH
T ss_pred             cEEEEecchhccCCccceEEEEEeCHHHHHHHHHHHh-hccCCCCcHHHHHHHHHHhhccccccchHHHHHHHHHHHHHH
Confidence              112222 2    12   55554  46565554322 223356677777777777641      123457888999999


Q ss_pred             HHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCc--c----------hHHHHH-HHhhcCceecc
Q psy10669        229 ASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKL--T----------GSKVEL-VLEEIAIACNK  280 (337)
Q Consensus       229 a~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~--~----------~~~~~~-~L~~~gI~v~~  280 (337)
                      .++|.+.|.+.|+++... ..+..+++++...+.  .          ..++.. .|+++||.+.+
T Consensus       317 ~~~l~~~L~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~  380 (422)
T 3fvs_A          317 RDHMIRSLQSVGLKPIIP-QGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIP  380 (422)
T ss_dssp             HHHHHHHHHTTTCEEEBC-SBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEE
T ss_pred             HHHHHHHHHHcCCeecCC-CeeeEEEEechhhcccccccccccccccHHHHHHHHHHhcCEEEeC
Confidence            999999999999987653 456677888754211  0          234444 56678999876

>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}

Probab=99.19  E-value=2.8e-09  Score=100.24  Aligned_cols=226  Identities=13%  Similarity=0.113  Sum_probs=147.0

Q ss_pred             ccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-c
Q psy10669         30 INGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-S  106 (337)
Q Consensus        30 ~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t  106 (337)
                      +.-|.|-..+|..  +|.|.+++...+. .+ .+++...      . .++    ++.+++++|.+.    .++.+++| +
T Consensus        15 ~~~id~~~~~~~~~~~~~v~~a~~~~~~-~~-~~y~~~~------~-~~l----r~~la~~~~~~~----~~i~~t~g~~   77 (350)
T 3fkd_A           15 SEIVNFSTTVWTDGDKDHLEKHLVENLN-CI-RHYPEPD------A-GTL----RQMLAKRNSVDN----NAILVTNGPT   77 (350)
T ss_dssp             -CCEECSCCSCCCSCCHHHHHHHHHTGG-GG-GSCCCTT------C-HHH----HHHHHHHTTCCG----GGEEEESHHH
T ss_pred             ccEEEccCCCCCCCCCHHHHHHHHHhHh-HH-hcCCCCc------H-HHH----HHHHHHHhCcCH----HHEEEcCCHH
Confidence            4567777777777  8999999987652 22 2333321      1 334    468889999875    25777776 6


Q ss_pred             hhHHHHHHhhCCc--------------------------cc---------ccccEEEEc-Ccc-cccccChHHHHHHhhh
Q psy10669        107 PANFAVCEKALPT--------------------------NN---------ARFDFLSSG-TTC-YSRCLDYARFRQICDE  149 (337)
Q Consensus       107 ~AN~~v~~aLl~~--------------------------~~---------a~pklII~~-~S~-~~~~~d~~~l~eia~~  149 (337)
                      +|+..++.++..+                          ..         .++++|++. +.+ .+...|.+++.+|++.
T Consensus        78 ~al~~~~~~l~gd~Vi~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~  157 (350)
T 3fkd_A           78 AAFYQIAQAFRGSRSLIAIPSFAEYEDACRMYEHEVCFYPSNEDIGEADFSNMDFCWLCNPNNPDGRLLQRTEILRLLND  157 (350)
T ss_dssp             HHHHHHHHHTTTCEEEEEESCCHHHHHHHHHTTCEEEEEETTSCGGGSCCTTCSEEEEESSCTTTCCCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCEEEEeCCCcHHHHHHHHHcCCeEEEEecCCccccCccCCCCEEEEeCCCCCcCCCCCHHHHHHHHHh
Confidence            7888877887532                          11         126777665 322 4688999999999988


Q ss_pred             cC-CeEEEeccccccccc--------------eeeeec-c-------CCchhhh--hHHHHHhhccCCCCCCCCcHHHHH
Q psy10669        150 TD-SIMFADMSHISGLIA--------------GVKGVT-K-------TGEKILY--DYEEKINNAVFPSLQGGPHNHAIG  204 (337)
Q Consensus       150 ~g-a~l~vD~AH~~Gli~--------------g~~~T~-~-------~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~ia  204 (337)
                      ++ .++++|++|......              .++++. |       ..|+++.  ++.+.+.....+   .++++...+
T Consensus       158 ~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~---~~~~~~~~~  234 (350)
T 3fkd_A          158 HPDTTFVLDQSYVSFTTEEVIRPADIKGRKNLVMVYSFSHAYGIPGLRIGYIVANKDFMKRVAAFSTP---WAVNALAIE  234 (350)
T ss_dssp             CTTSEEEEECTTTTSCSSCCCCGGGGTTCSSEEEEEESHHHHSCGGGCCEEEECCHHHHHHHHTTCCT---TCSCHHHHH
T ss_pred             CCCCEEEEECchhhhccCcchhhHHhhcCCCEEEEecCchhccCcchheEeEEeCHHHHHHHHHhCCC---CCCCHHHHH
Confidence            75 799999999642211              122232 2       2266654  577777655333   356666666


Q ss_pred             HHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCCCcchHHHHHHHhh-cCceeccC
Q psy10669        205 AIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEE-IAIACNKN  281 (337)
Q Consensus       205 ala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~-~gI~v~~~  281 (337)
                      ++..++...  ..+.+..++..++.++|.+.|.+. |+++..  +..+.+++.+...  +..++.+.|.+ .||.+.+-
T Consensus       235 ~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~~~~~~~~~~~~~--~~~~l~~~L~~~~gi~v~~g  307 (350)
T 3fkd_A          235 AAKFILIHP--AQFTLPIRKWQRNTVDFITALNRLDGVEVHP--SGTTFFLLRLKKG--TAAELKKYMLEEYNMLIRDA  307 (350)
T ss_dssp             HHHHHHHCT--TTTCCCHHHHHHHHHHHHHHHHHSTTEEECC--CSSSEEEEEESSS--CHHHHHHHHHHTTCEECEEC
T ss_pred             HHHHHHhCH--HHHHHHHHHHHHHHHHHHHHHhcCCCcEECC--CCCcEEEEECCCC--CHHHHHHHHHHHCCEEEEeC
Confidence            666666542  224344455559999999999986 898865  5566777777653  67788888887 99998853

>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9

Probab=99.19  E-value=2.5e-10  Score=112.50  Aligned_cols=190  Identities=12%  Similarity=0.067  Sum_probs=123.0

Q ss_pred             HHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-c-hhHHHHHHhhC---C-c----------------------------
Q psy10669         74 IDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-S-PANFAVCEKAL---P-T----------------------------  119 (337)
Q Consensus        74 ~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t-~AN~~v~~aLl---~-~----------------------------  119 (337)
                      ..+++..+++.+++++|++.    . +.+++| | .+|+.++.++.   + +                            
T Consensus       131 ~~~~~~~~~~~la~~~g~~~----~-~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~  205 (456)
T 2z67_A          131 MYALTNKILESFFKQLGLNV----H-AIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSFVGMNMRLVET  205 (456)
T ss_dssp             HHHHHHHHHHHHHHHTTCCC----E-EEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHTTCEEEEECC
T ss_pred             HHHHHHHHHHHHHHHcCCCC----C-EEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHHHcCCCceEEEE
Confidence            56788889999999999986    3 566555 7 56775556542   1 1                            


Q ss_pred             ----------------cc-c-----cccEEEEcCcc--cccccChHHHHHHhhhcCCeEEEeccccccccc---------
Q psy10669        120 ----------------NN-A-----RFDFLSSGTTC--YSRCLDYARFRQICDETDSIMFADMSHISGLIA---------  166 (337)
Q Consensus       120 ----------------~~-a-----~pklII~~~S~--~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~---------  166 (337)
                                      .+ .     ++.+|++..++  .+...|+++|.++|+++|++++||+||.....+         
T Consensus       206 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~~~g~~~~~~~~~  285 (456)
T 2z67_A          206 VLDGDRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAF  285 (456)
T ss_dssp             EEETTEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHH
T ss_pred             eccCCCCCcCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcchHHHHHhhHHHHHhh
Confidence                            11 1     23445444332  478899999999999999999999888643321         


Q ss_pred             -----eeeeec-c-----C-Cchhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHH
Q psy10669        167 -----GVKGVT-K-----T-GEKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASH  231 (337)
Q Consensus       167 -----g~~~T~-~-----~-Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~  231 (337)
                           .+++++ |     . +|+++.   ++.+.+.+. +++..  +..+ .+++..++..+....+++..++..+++++
T Consensus       286 ~~~~D~~~~s~hK~~~~p~g~G~l~~~~~~~~~~l~~~-~~g~~--~~~~-~~~~~aal~~l~~~~~~~~~~~~~~~~~~  361 (456)
T 2z67_A          286 KYRVDAVVSSSDKNLLTPIGGGLVYSTDAEFIKEISLS-YPGRA--SATP-VVNTLVSLLSMGSKNYLELVKNQKNSKKL  361 (456)
T ss_dssp             TSCCSEEEEEHHHHHCCCSSCEEEEESCHHHHHHHHTT-SCSCB--CSHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEcCCCCcCCCCCeEEEEEcCHHHHhhcCcC-CCCCC--CCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                 123332 2     2 365554   355566443 33321  1222 45555666666555678889999999999


Q ss_pred             HHHHHHhC----CCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCc
Q psy10669        232 LSDEMIKR----GYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAI  276 (337)
Q Consensus       232 l~~~L~~~----G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI  276 (337)
                      |.+.|.+.    |+.+..  .+ .++++.++..+. ..++.+.|.+.||
T Consensus       362 l~~~L~~~~~~~g~~v~~--~~-~~v~~~~~~~~~-~~~l~~~L~~~gi  406 (456)
T 2z67_A          362 LDELLNDLSKKTGGKFLD--VE-SPIASCISVNSD-PVEIAAKLYNLRV  406 (456)
T ss_dssp             HHHHHHHHHHHSSCCBCC--CC-CSSEEEEECSSC-HHHHHHHHHHTTE
T ss_pred             HHHHHHhcccccCCEecC--CC-CeEEEEEecccH-HHHHHHHHHHcCC
Confidence            99999986    887765  33 556666632232 3567888887776

>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1

Probab=99.18  E-value=1.8e-09  Score=103.35  Aligned_cols=241  Identities=15%  Similarity=0.037  Sum_probs=146.6

Q ss_pred             ccceeeeccCCC--CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCC-CCCCcceeecCCC-
Q psy10669         30 INGIELIASENF--TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLD-PEQWGCNVQPYSG-  105 (337)
Q Consensus        30 ~~~i~l~asen~--~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~-~~~~~~~v~~~Sg-  105 (337)
                      +..|.|...++-  .+|.+.+++...+.. ...+      |.......+++....+.+.+.+|.+ .+   .++.+++| 
T Consensus        41 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~-~~~~------y~~~~g~~~lr~~la~~~~~~~g~~~~~---~~v~~~~g~  110 (389)
T 1o4s_A           41 EDVINLTAGEPDFPTPEPVVEEAVRFLQK-GEVK------YTDPRGIYELREGIAKRIGERYKKDISP---DQVVVTNGA  110 (389)
T ss_dssp             CCCEECCCSSCSSCCCHHHHHHHHHHHTT-CCCC------CCCTTCCHHHHHHHHHHHHHHHTCCCCG---GGEEEESHH
T ss_pred             CCEEEccCCCCCCCCCHHHHHHHHHHHhc-CCCC------CCCCCCCHHHHHHHHHHHHHHhCCCCCH---HHEEEecCH
Confidence            345777666654  378999999876543 1111      2222223556543334444445753 11   24666666 


Q ss_pred             chhHHHHHHhhCCc-------------------------------c----------c--c---cccEEEEc-Ccc-cccc
Q psy10669        106 SPANFAVCEKALPT-------------------------------N----------N--A---RFDFLSSG-TTC-YSRC  137 (337)
Q Consensus       106 t~AN~~v~~aLl~~-------------------------------~----------~--a---~pklII~~-~S~-~~~~  137 (337)
                      +.|+..++.+++++                               .          +  +   ++++|++. .++ .+..
T Consensus       111 t~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~  190 (389)
T 1o4s_A          111 KQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVV  190 (389)
T ss_dssp             HHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCCTTEEEEEEESSCTTTCCC
T ss_pred             HHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcccCceEEEEcCCCCCCCCC
Confidence            78988888888654                               0          0  0   25666664 322 3465


Q ss_pred             cC---hHHHHHHhhhcCCeEEEeccccccccce----------------eeeec-c----C---Cchhhh--hHHHHHhh
Q psy10669        138 LD---YARFRQICDETDSIMFADMSHISGLIAG----------------VKGVT-K----T---GEKILY--DYEEKINN  188 (337)
Q Consensus       138 ~d---~~~l~eia~~~ga~l~vD~AH~~Gli~g----------------~~~T~-~----~---Gg~i~~--~l~~~i~~  188 (337)
                      .|   +++|.++|+++|+++++|++|..+...+                ++++. |    .   .|+++.  ++.+.+..
T Consensus       191 ~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~l~~~~~~~~~l~~  270 (389)
T 1o4s_A          191 YRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISSEKVATAVSK  270 (389)
T ss_dssp             CCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCHhhcCCCCCcEEEEeechhhcCCcccceEEEEeCHHHHHHHHH
Confidence            55   7788899999999999999998765421                12332 2    1   266654  46665554


Q ss_pred             ccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHH
Q psy10669        189 AVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVE  268 (337)
Q Consensus       189 ~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~  268 (337)
                      ...++.. ++++...++...++.    ...++.++++.++.++|.+.|.+.|+++... ..+..+++.+.   .+..++.
T Consensus       271 ~~~~~~~-~~~~~~~~a~~~~l~----~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~~~~---~~~~~l~  341 (389)
T 1o4s_A          271 IQSHTTS-CINTVAQYAALKALE----VDNSYMVQTFKERKNFVVERLKKMGVKFVEP-EGAFYLFFKVR---GDDVKFC  341 (389)
T ss_dssp             HHHHHTC-SCCHHHHHHHHHHTT----CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCC-SBSSEEEEECS---SCHHHHH
T ss_pred             Hhhhccc-CCCHHHHHHHHHHHh----ccHHHHHHHHHHHHHHHHHHHHhcCCeeecC-CcceEEEEeCC---CCHHHHH
Confidence            3322223 334444444333332    2267889999999999999999989887642 33556667765   3567777


Q ss_pred             HHHh-hcCceeccCc------ccchhhh
Q psy10669        269 LVLE-EIAIACNKNT------GISLAAE  289 (337)
Q Consensus       269 ~~L~-~~gI~v~~~~------girig~~  289 (337)
                      +.|. +.||.+.+..      .+||+..
T Consensus       342 ~~l~~~~gi~v~~g~~f~~~~~~Ris~~  369 (389)
T 1o4s_A          342 ERLLEEKKVALVPGSAFLKPGFVRLSFA  369 (389)
T ss_dssp             HHHHHHHCEECEEGGGGTCTTEEEEECC
T ss_pred             HHHHHHCCEEEeCchhcCCCCeEEEEEe
Confidence            7775 7899987532      5677643

>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}

Probab=99.18  E-value=4.2e-10  Score=109.26  Aligned_cols=225  Identities=15%  Similarity=0.163  Sum_probs=142.0

Q ss_pred             eeeccCCCCC--HHHHHHHhhhhhhccCCCCCCCcCcCc-cchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHH
Q psy10669         34 ELIASENFTS--LAVLECLGSCLQNKYSEGLPGKRYYGG-NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANF  110 (337)
Q Consensus        34 ~l~asen~~~--p~V~~a~~~~l~~~y~~g~~g~r~~~G-~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~  110 (337)
                      .|-..++..+  +.+.+++...+..    +    + |.. .....+++    +.+++++|.+.     .+...||+.|+.
T Consensus        20 ~l~~~~p~~~~p~~~~~a~~~~~~~----~----~-y~~~~~~~~~l~----~~la~~~~~~~-----v~~~~ggt~al~   81 (424)
T 2po3_A           20 PLLVGRPNRIDRARLYERLDRALDS----Q----W-LSNGGPLVREFE----ERVAGLAGVRH-----AVATCNATAGLQ   81 (424)
T ss_dssp             CEETTCCCCCCHHHHHHHHHHHHHH----T----C-CSSSCHHHHHHH----HHHHHHHTSSE-----EEEESCHHHHHH
T ss_pred             cccccCCCCCChHHHHHHHHHHHhc----C----C-cccCCHHHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHH
Confidence            4556666664  4899988766542    1    1 332 33445555    57889999863     355556689998


Q ss_pred             HHHHhhCCc-----------------------------------------ccc---cccEEEEcCcccccccChHHHHHH
Q psy10669        111 AVCEKALPT-----------------------------------------NNA---RFDFLSSGTTCYSRCLDYARFRQI  146 (337)
Q Consensus       111 ~v~~aLl~~-----------------------------------------~~a---~pklII~~~S~~~~~~d~~~l~ei  146 (337)
                      .++.++.+.                                         +.+   ++++|++.+ .++...|+++|.++
T Consensus        82 ~~l~~l~~gd~Vlv~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~-~tG~~~~l~~i~~l  160 (424)
T 2po3_A           82 LLAHAAGLTGEVIMPSMTFAATPHALRWIGLTPVFADIDPDTGNLDPDQVAAAVTPRTSAVVGVH-LWGRPCAADQLRKV  160 (424)
T ss_dssp             HHHHHHTCCSEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTSSBCHHHHGGGCCTTEEEEEEEC-GGGCCCCHHHHHHH
T ss_pred             HHHHHcCCCCEEEECCCccHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhhCcCCcEEEEEC-CCCCcCCHHHHHHH
Confidence            888888431                                         111   267888754 56788999999999


Q ss_pred             hhhcCCeEEEeccccccccc----------eeeeec---c-----CCchhhh---hHHHHHhhccCCCCC--------CC
Q psy10669        147 CDETDSIMFADMSHISGLIA----------GVKGVT---K-----TGEKILY---DYEEKINNAVFPSLQ--------GG  197 (337)
Q Consensus       147 a~~~ga~l~vD~AH~~Gli~----------g~~~T~---~-----~Gg~i~~---~l~~~i~~~~~p~~~--------g~  197 (337)
                      |+++|+++++|++|..|+.-          .++++.   |     .||+++.   ++.+.+.....++..        |.
T Consensus       161 a~~~~~~li~Dea~~~g~~~~~~~~~~~~di~~~S~sk~K~l~~~~~G~~v~~~~~l~~~l~~~~~~~~~~~~~~~~~g~  240 (424)
T 2po3_A          161 ADEHGLRLYFDAAHALGCAVDGRPAGSLGDAEVFSFHATKAVNAFEGGAVVTDDADLAARIRALHNFGFDLPGGSPAGGT  240 (424)
T ss_dssp             HHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHHBTTTTCTTCCTTCCC
T ss_pred             HHHcCCEEEEECccccCCeECCeecccccCEEEEeCCCCCCccCCCCeEEEeCCHHHHHHHHHHHhcCccccccccccCc
Confidence            99999999999999976642          123332   2     3566664   355555433222111        11


Q ss_pred             C-cHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEec-C-CCC--CeEEEEEecCC--CcchHHHHH
Q psy10669        198 P-HNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVT-G-GTD--VHLILIDLRKN--KLTGSKVEL  269 (337)
Q Consensus       198 ~-~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~-~-~t~--~h~v~V~~~~~--~~~~~~~~~  269 (337)
                      + .++.+++ ++++...  ...+++.++..+++++|.+.|.+. |+++.. . ++.  -+++.+.+...  +.+..++.+
T Consensus       241 ~~~~~~~~a-a~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~  317 (424)
T 2po3_A          241 NAKMSEAAA-AMGLTSL--DAFPEVIDRNRRNHAAYREHLADLPGVLVADHDRHGLNNHQYVIVEIDEATTGIHRDLVME  317 (424)
T ss_dssp             BCCCCHHHH-HHHHHHH--HHHHHHHHHHHHHHHHHHHHTCSCTTEEECCGGGGSCCCCCCEEEEECHHHHSSCHHHHHH
T ss_pred             CCCcCHHHH-HHHHHHH--HHHHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCccccEEEEEEECCccchhhHHHHHH
Confidence            1 1112211 1222222  245678899999999999999885 888864 1 222  26776777531  456788889


Q ss_pred             HHhhcCceecc
Q psy10669        270 VLEEIAIACNK  280 (337)
Q Consensus       270 ~L~~~gI~v~~  280 (337)
                      .|.+.||.+..
T Consensus       318 ~L~~~gI~v~~  328 (424)
T 2po3_A          318 VLKAEGVHTRA  328 (424)
T ss_dssp             HHHHTTEECBC
T ss_pred             HHHHCCCceec
Confidence            99999999875

>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*

Probab=99.17  E-value=3.4e-09  Score=104.88  Aligned_cols=155  Identities=14%  Similarity=0.112  Sum_probs=97.2

Q ss_pred             ccEEEEcCcc-cccc-cChHHHHHHhhhcCCeEEEeccccccccc-------e---eeee-cc-----C------Cchhh
Q psy10669        124 FDFLSSGTTC-YSRC-LDYARFRQICDETDSIMFADMSHISGLIA-------G---VKGV-TK-----T------GEKIL  179 (337)
Q Consensus       124 pklII~~~S~-~~~~-~d~~~l~eia~~~ga~l~vD~AH~~Gli~-------g---~~~T-~~-----~------Gg~i~  179 (337)
                      +++|++...+ .+.. .|+++|.++|+++|+++++|++|..|+++       +   ++++ +|     .      .|+++
T Consensus       204 t~~v~~~~pn~~G~~~~~l~~i~~l~~~~g~~li~Dea~~~~~~g~~~~~~~g~di~~~s~~K~~~~p~g~gG~~~G~~~  283 (474)
T 1wyu_B          204 VAALMLTNPNTLGLFERRILEISRLCKEAGVQLYYDGANLNAIMGWARPGDMGFDVVHLNLHKTFTVPHGGGGPGSGPVG  283 (474)
T ss_dssp             EEEEEECSSCTTSCCCTTHHHHHHHHHHHTCEEEEEGGGGGGTTTTCCHHHHTCSEEECCTTTTTCCCCTTSCCCCCCEE
T ss_pred             ceEEEEECCCCCcccCCCHHHHHHHHHHcCCEEEEeCchhhhhccCCCcccCCCcEEEEeCccccccCCCCCCCCeEEEE
Confidence            5677776433 4555 58999999999999999999999877653       1   2222 22     1      25554


Q ss_pred             h--hHHHHHhh-cc------------CC-----CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC
Q psy10669        180 Y--DYEEKINN-AV------------FP-----SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR  239 (337)
Q Consensus       180 ~--~l~~~i~~-~~------------~p-----~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~  239 (337)
                      .  ++.+.+.. .+            .|     ...++++....++....+..+....+++..++..+++++|.+.|.+.
T Consensus       284 ~~~~l~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~~~l~~~L~~~  363 (474)
T 1wyu_B          284 VKAHLAPYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKEK  363 (474)
T ss_dssp             ECGGGGGGCCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EcHHHHHhCCCCeeeccCCeeEecccCcccCcccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            4  34444431 00            01     01223444333333333333323445677899999999999999998


Q ss_pred             CCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceec
Q psy10669        240 GYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACN  279 (337)
Q Consensus       240 G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~  279 (337)
                      |+++..++...|..++++ ..+.+..++.+.|.+.||.+.
T Consensus       364 g~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~L~~~Gi~~~  402 (474)
T 1wyu_B          364 GYRVPYDGPSMHEFVAQP-PEGFRALDLAKGLLELGFHPP  402 (474)
T ss_dssp             TCBCSSCSSCCSCEEEBC-STTCCHHHHHHHHHHTTCCCC
T ss_pred             CcEecCCCCcceEEEEEc-CCCCCHHHHHHHHHHCCcccc
Confidence            998854333445466676 345578888888888899863

>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}

Probab=99.17  E-value=1.7e-10  Score=109.46  Aligned_cols=273  Identities=10%  Similarity=0.056  Sum_probs=157.7

Q ss_pred             ceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHH
Q psy10669         32 GIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFA  111 (337)
Q Consensus        32 ~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~  111 (337)
                      .+++-.+++..++ +++++...+...        + |.......+++    +.+++++|.++     .+.+.||+.|+..
T Consensus         8 ~~~l~~~~~~~~~-~~~~~~~~~~~~--------~-~~~~~~~~~l~----~~la~~~~~~~-----~~~~~~gt~a~~~   68 (374)
T 3uwc_A            8 YSYLERQFADIEP-YLNDLREFIKTA--------D-FTLGAELEKFE----KRFAALHNAPH-----AIGVGTGTDALAM   68 (374)
T ss_dssp             SCCHHHHTSSCHH-HHHHHHHHHHHT--------C-CSSCHHHHHHH----HHHHHHTTCSE-----EEEESCHHHHHHH
T ss_pred             eeccccCCCCchH-HHHHHHHHHHcC--------C-cccChhHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHH
Confidence            3455556666677 888887654431        1 22233445555    68899999874     5777888999988


Q ss_pred             HHHhh-CCc---------------------------------------ccc-----cccEEEEcCcccccccChHHHHHH
Q psy10669        112 VCEKA-LPT---------------------------------------NNA-----RFDFLSSGTTCYSRCLDYARFRQI  146 (337)
Q Consensus       112 v~~aL-l~~---------------------------------------~~a-----~pklII~~~S~~~~~~d~~~l~ei  146 (337)
                      ++.++ +++                                       .+.     ++++|+.. ...+...|+++|.++
T Consensus        69 ~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~-n~~G~~~~~~~i~~~  147 (374)
T 3uwc_A           69 SFKMLNIGAGDEVITCANTFIASVGAIVQAGATPVLVDSENGYVIDPEKIEAAITDKTKAIMPV-HYTGNIADMPALAKI  147 (374)
T ss_dssp             HHHHTTCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBCTTSSBCGGGTGGGCCTTEEEECCB-CGGGCCCCHHHHHHH
T ss_pred             HHHHcCCCCCCEEEECCCccHHHHHHHHHcCCEEEEEecCCCCCcCHHHHHHhCCCCceEEEEe-CCcCCcCCHHHHHHH
Confidence            88988 654                                       111     15677743 345788899999999


Q ss_pred             hhhcCCeEEEeccccccccc----------eeeee-c--c------CCchhhh---hHHHHHhhccCCCC-------CCC
Q psy10669        147 CDETDSIMFADMSHISGLIA----------GVKGV-T--K------TGEKILY---DYEEKINNAVFPSL-------QGG  197 (337)
Q Consensus       147 a~~~ga~l~vD~AH~~Gli~----------g~~~T-~--~------~Gg~i~~---~l~~~i~~~~~p~~-------~g~  197 (337)
                      |+++|+++++|++|+.|..-          .++++ +  |      .||++++   ++.+.+......+.       ..+
T Consensus       148 ~~~~~~~li~D~~~~~g~~~~~~~~~~~~d~~~~s~~~~K~l~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (374)
T 3uwc_A          148 AKKHNLHIVEDACQTILGRINDKFVGSWGQFACFSLHPLKNLNVWSDAGVIITHSDEYAEKLRLYRNHGLINRDVCVEYG  227 (374)
T ss_dssp             HHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECSSSSSSCCSSCCEEEEESCHHHHHHHHHHTBTTEEETTEESSCC
T ss_pred             HHHcCCEEEEeCCCccCceeCCeeccccccEEEEeCCCCCcCCccceeEEEEeCCHHHHHHHHHHHhcCccccCcccccc
Confidence            99999999999999987532          12222 2  2      2466654   35554443211100       011


Q ss_pred             CcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC--CEEecCCC---CC-eEEEEEecCCCcchHHHHHHH
Q psy10669        198 PHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG--YHVVTGGT---DV-HLILIDLRKNKLTGSKVELVL  271 (337)
Q Consensus       198 ~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G--~~v~~~~t---~~-h~v~V~~~~~~~~~~~~~~~L  271 (337)
                      .+. .+.++..++........+++.++..++++++.+.|.+.+  +++.....   .. +.+++...    +..++.+.|
T Consensus       228 ~~~-~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~L  302 (374)
T 3uwc_A          228 INC-RMDTIQAVIANRLMNQLETITEKRRGIAHLYDQSFVDLSEFIDVPVRREGVYHVFHIYVLRVK----YRDQLFQYL  302 (374)
T ss_dssp             CBC-BCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHTGGGTTTEECCCCCTTEECCCSSEEEEET----THHHHHHHH
T ss_pred             ccC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEeccCCCCCceeeEEEEEEcC----CHHHHHHHH
Confidence            111 122222222222234567888999999999999999865  66643111   11 33444332    567888899


Q ss_pred             hhcCceeccCc--ccchhhhhHhhhCCCH------HHHHHHHh----hCCCcHHHHHHHHHHHHHHHhcCC
Q psy10669        272 EEIAIACNKNT--GISLAAEIQAISGPKL------VDFQTCLH----KNEDIVKKVAALKKEIEDYSNQFE  330 (337)
Q Consensus       272 ~~~gI~v~~~~--girig~~~~t~~G~~~------~~~~~~~~----~~~~~~~~~~~lr~~V~~~~~~fp  330 (337)
                      .+.||.+....  .+... +.....|...      .++....+    ....++++++.+-+.+.++..+.+
T Consensus       303 ~~~gi~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l~~~~  372 (374)
T 3uwc_A          303 KDNGIEVKIHYPIAMHLQ-PAAKSLGYQQGDFPMAEKHGEAVITLPAHPYLTEEEINYIIKKVREFYLEKH  372 (374)
T ss_dssp             HHTTBCCBCSCSSCGGGS-GGGGGGCCCTTSCHHHHHHHHHEEEECCCTTSCHHHHHHHHHHHHHHHHTTT
T ss_pred             HHCCCccccCCCCccccC-hhhhhcCCccCCCccHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHHHhhc
Confidence            98899887532  11111 1222223221      11212111    111235677777777777776543

>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}

Probab=99.17  E-value=1.9e-09  Score=103.86  Aligned_cols=257  Identities=13%  Similarity=0.043  Sum_probs=151.9

Q ss_pred             hhhhcHHHHHHHHHHHhhcccceeeeccCCC--CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhh
Q psy10669         11 LAQTDPELYSLIKKEKHRQINGIELIASENF--TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKA   88 (337)
Q Consensus        11 l~~~d~~~~~~~~~e~~rq~~~i~l~asen~--~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~l   88 (337)
                      +....+.++..+.+- .++...|.|...++-  .+|.+.+++...+.+. ..++      .......+++....+.+.+.
T Consensus         7 ~~~~~~~~~~~~~~~-~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y------~~~~g~~~l~~~la~~~~~~   78 (411)
T 2o0r_A            7 LRPYATTVFAEMSAL-ATRIGAVNLGQGFPDEDGPPKMLQAAQDAIAGG-VNQY------PPGPGSAPLRRAIAAQRRRH   78 (411)
T ss_dssp             GGGGSSCHHHHHHHH-HHTTTCEESSCSSCSSCCCHHHHHHHHHHHHTT-CCSC------CCTTCCHHHHHHHHHHHHHH
T ss_pred             hHhcCccHHHHHHHH-hhcCCeeeccCcCCCCCCCHHHHHHHHHHHhcC-CCCC------CCCCCCHHHHHHHHHHHHHH
Confidence            344445454444432 223456777766654  3799999998765431 1122      11122345554444555666


Q ss_pred             cCCCC-CCCcceeecCCC-chhHHHHHHhhCCc--------------------------------c-----c-------c
Q psy10669         89 FNLDP-EQWGCNVQPYSG-SPANFAVCEKALPT--------------------------------N-----N-------A  122 (337)
Q Consensus        89 fg~~~-~~~~~~v~~~Sg-t~AN~~v~~aLl~~--------------------------------~-----~-------a  122 (337)
                      +|.+. +++  +|.+++| +.|+..++.+++++                                .     .       +
T Consensus        79 ~g~~~~~~~--~v~~t~g~~~al~~~~~~~~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~  156 (411)
T 2o0r_A           79 FGVDYDPET--EVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGFALDADALRRA  156 (411)
T ss_dssp             HCCCCCTTT--SEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHHH
T ss_pred             cCCCCCCCc--eEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCEEEEeeccccccCCCCCHHHHHHh
Confidence            67531 110  4666666 78988888888654                                1     0       0


Q ss_pred             ---cccEEEEc-Ccc-cccccCh---HHHHHHhhhcCCeEEEeccccccccc-----------------eeeeec-c---
Q psy10669        123 ---RFDFLSSG-TTC-YSRCLDY---ARFRQICDETDSIMFADMSHISGLIA-----------------GVKGVT-K---  173 (337)
Q Consensus       123 ---~pklII~~-~S~-~~~~~d~---~~l~eia~~~ga~l~vD~AH~~Gli~-----------------g~~~T~-~---  173 (337)
                         ++++|++. .++ .+...|.   ++|.++|+++|+++++|++|..+...                 .++++. |   
T Consensus       157 l~~~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~  236 (411)
T 2o0r_A          157 VTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMFN  236 (411)
T ss_dssp             CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTT
T ss_pred             hccCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeechhhcC
Confidence               25777765 222 2455554   67889999999999999999864331                 112222 2   


Q ss_pred             -CC---chhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCC
Q psy10669        174 -TG---EKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGG  247 (337)
Q Consensus       174 -~G---g~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~  247 (337)
                       .|   |+++.  ++.+.+......... +++++..+++..++... ....++.++++.++.++|.+.|.+.|+++... 
T Consensus       237 ~~G~r~G~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-  313 (411)
T 2o0r_A          237 CTGWKIGWACGPAELIAGVRAAKQYLSY-VGGAPFQPAVALALDTE-DAWVAALRNSLRARRDRLAAGLTEIGFAVHDS-  313 (411)
T ss_dssp             CTTTCEEEEECCHHHHHHHHHHHHHHTS-CCCTTHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHTCEECCC-
T ss_pred             CccceEEEEeeCHHHHHHHHHHHhhccC-CCChHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHHcCCEecCC-
Confidence             23   66654  455554432111112 33445566666666543 33456788899999999999999889988652 


Q ss_pred             CCCeEEEEEecCC-CcchHHHHHHH-hhcCceecc
Q psy10669        248 TDVHLILIDLRKN-KLTGSKVELVL-EEIAIACNK  280 (337)
Q Consensus       248 t~~h~v~V~~~~~-~~~~~~~~~~L-~~~gI~v~~  280 (337)
                      ..+..+++++... +.+..++.+.| ++.||.+.+
T Consensus       314 ~~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~  348 (411)
T 2o0r_A          314 YGTYFLCADPRPLGYDDSTEFCAALPEKVGVAAIP  348 (411)
T ss_dssp             CBSSEEEEECGGGTCCCHHHHHHHHHHHHSEECEE
T ss_pred             CeeEEEEEecCCCCCCCHHHHHHHHHHhCCEEEcC
Confidence            3355777888642 13566777765 467999864

>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}

Probab=99.16  E-value=4.7e-10  Score=110.48  Aligned_cols=196  Identities=11%  Similarity=0.077  Sum_probs=131.3

Q ss_pred             HHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHhhCCc---------------------------------cc------
Q psy10669         82 QQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEKALPT---------------------------------NN------  121 (337)
Q Consensus        82 ~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~aLl~~---------------------------------~~------  121 (337)
                      ++.+++ ||+++     ++.+++| +.||..++.+++++                                 ..      
T Consensus        63 ~~~la~-~g~~~-----~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~~~~  136 (446)
T 2x3l_A           63 MKQVEK-HSDYD-----GYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVLHALDISQQEGHFIETHQSPLTNHYNK  136 (446)
T ss_dssp             HHHHCS-CTTEE-----EEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHHHHHHHHTCCEEECEEEECTTTSSEEE
T ss_pred             HHHHHh-cCCCc-----eEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHHHHHHHcCCeEEEEeCeeccccCcCCC
Confidence            468889 99874     5777777 58999999998764                                 10      


Q ss_pred             ------c--cccEEEEcCcc-cccccChHHHHHHhhhcCCeEEEeccccccc------cc-------eeeee-cc-----
Q psy10669        122 ------A--RFDFLSSGTTC-YSRCLDYARFRQICDETDSIMFADMSHISGL------IA-------GVKGV-TK-----  173 (337)
Q Consensus       122 ------a--~pklII~~~S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gl------i~-------g~~~T-~~-----  173 (337)
                            .  ++++|++..++ ++...|+++|.++|+++|+++++|+||+..+      +.       .++++ +|     
T Consensus       137 ~d~~~l~~~~~~~v~~~~~n~~G~~~~l~~I~~l~~~~~~~livDea~~~~~~f~~~~~~~~~~g~Di~~~S~~K~l~~~  216 (446)
T 2x3l_A          137 VNLSRLNNDGHKLVVLTYPNYYGETFNVEEVIKSLHQLNIPVLIDEAHGAHFGLQGFPDSTLNYQADYVVQSFHKTLPAL  216 (446)
T ss_dssp             EEC-------CCEEEEESSCTTSCCCCHHHHHHHHHHTTCCEEEECTTCTTTTSTTSCCCGGGGTCSEEEECHHHHSSSC
T ss_pred             CCHHHHcCCCceEEEEECCCCCeEecCHHHHHHHHHhcCCeEEEcchhhhhhccCCCCCChHHcCCCEEEECCccccccc
Confidence                  1  25667766544 5788999999999999999999999998722      11       12333 33     


Q ss_pred             -CCchhhh--hH--HHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCC
Q psy10669        174 -TGEKILY--DY--EEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGT  248 (337)
Q Consensus       174 -~Gg~i~~--~l--~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t  248 (337)
                       .+|+++.  ++  ...+.........++++...++++..++..+.....+.+.++..+++++|++.    |+++.... 
T Consensus       217 ~g~g~l~~~~~~i~~~~~~~~~~~~~~~s~~~~~~aal~~a~~~l~~~g~~~~~~~~~~l~~~l~~~----g~~~~~~~-  291 (446)
T 2x3l_A          217 TMGSVLYIHKNAPYRENIIEYLSYFQTSSPSYLIMASLESAAQFYKTYDSTLFFAKRAQLIECLENK----GFEMLQVD-  291 (446)
T ss_dssp             TTCEEEEEETTCTTHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH----TCEEEECS-
T ss_pred             cccEEEEEcCCcCCHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHc----CCEECcCC-
Confidence             2355543  22  22333322223357888899999988887775322233677777777777665    89988632 


Q ss_pred             CCeEEEEEecCCCcchHHHHHHHhhcCceec-cC-cccchhhhh
Q psy10669        249 DVHLILIDLRKNKLTGSKVELVLEEIAIACN-KN-TGISLAAEI  290 (337)
Q Consensus       249 ~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~-~~-~girig~~~  290 (337)
                      +...+++++.  +.++.++.+.|.+.||.+. .. ..+|++...
T Consensus       292 ~~~~l~i~~~--~~~~~~l~~~L~~~GI~v~~~g~~~iRi~~~~  333 (446)
T 2x3l_A          292 DPLKLLIKYE--GFTGHDIQNWFMNAHIYLELADDYQALAILPL  333 (446)
T ss_dssp             STTEEEEECT--TSCHHHHHHHHHHTTEEESEECSSCEEEECCC
T ss_pred             CCeEEEEEeC--CcCHHHHHHHHHHCCCEEEecCCCEEEEEeec
Confidence            3335677765  5678889999988899997 32 278887653

>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}

Probab=99.16  E-value=4.3e-09  Score=100.89  Aligned_cols=227  Identities=12%  Similarity=0.008  Sum_probs=137.9

Q ss_pred             CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCC--CCCCCcceeecCCC-chhHHHHHHhhCC
Q psy10669         42 TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNL--DPEQWGCNVQPYSG-SPANFAVCEKALP  118 (337)
Q Consensus        42 ~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~--~~~~~~~~v~~~Sg-t~AN~~v~~aLl~  118 (337)
                      .+|.+.+++...+.+ +.   .... |.......+++....+.+.+.+|.  +.    .+|.+++| +.|+..++.++++
T Consensus        50 ~~~~v~~a~~~~~~~-~~---~~~~-y~~~~~~~~l~~~la~~~~~~~g~~~~~----~~v~~t~g~t~a~~~~~~~~~~  120 (407)
T 2zc0_A           50 PRAVLGEIAKEVLEK-EP---KSVM-YTPANGIPELREELAAFLKKYDHLEVSP----ENIVITIGGTGALDLLGRVLID  120 (407)
T ss_dssp             CHHHHHHHHHHHHHH-CG---GGGS-CCCTTCCHHHHHHHHHHHHHHSCCCCCG----GGEEEESHHHHHHHHHHHHHCC
T ss_pred             CHHHHHHHHHHHHhh-cc---cccc-CCCCCCCHHHHHHHHHHHHHhcCCCCCc----ceEEEecCHHHHHHHHHHHhcC
Confidence            357899988776543 11   0111 322222355654333344444584  33    25777777 7899888899865


Q ss_pred             c------------------------------------------cc-----c--cccEEEEcCc--c-cccccChH---HH
Q psy10669        119 T------------------------------------------NN-----A--RFDFLSSGTT--C-YSRCLDYA---RF  143 (337)
Q Consensus       119 ~------------------------------------------~~-----a--~pklII~~~S--~-~~~~~d~~---~l  143 (337)
                      +                                          .+     .  ++++|++.++  + .+...|.+   +|
T Consensus       121 ~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i  200 (407)
T 2zc0_A          121 PGDVVITENPSYINTLLAFEQLGAKIEGVPVDNDGMRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKAL  200 (407)
T ss_dssp             TTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETTEECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHH
T ss_pred             CCCEEEEeCCChHHHHHHHHHcCCEEEEcccCCCCCCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHH
Confidence            4                                          01     1  3567643322  2 35777776   77


Q ss_pred             HHHhhhcCCeEEEeccccccccc-------------e---eeeec-c------CCchhhh--hHHHHHhhccCCCCCCCC
Q psy10669        144 RQICDETDSIMFADMSHISGLIA-------------G---VKGVT-K------TGEKILY--DYEEKINNAVFPSLQGGP  198 (337)
Q Consensus       144 ~eia~~~ga~l~vD~AH~~Gli~-------------g---~~~T~-~------~Gg~i~~--~l~~~i~~~~~p~~~g~~  198 (337)
                      .++|+++|+++++|++|..+...             +   +.+|. |      .+|+++.  ++.+.+.....+...+ +
T Consensus       201 ~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~-~  279 (407)
T 2zc0_A          201 LEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVAGTLSKVLGTGFRIGWIIAEGEILKKVLMQKQPIDFC-A  279 (407)
T ss_dssp             HHHHHHHTCEEEEECTTTTSBSSCSSCCCGGGGCSSCCEEEEEESTTTTCTTSCCEEEECCHHHHHHHHHHHTTTTSS-S
T ss_pred             HHHHHHcCCEEEEECCCcccccCCCCCCChhhcCCCCCEEEEcccccccCCCcceEEEecCHHHHHHHHHHHHhhcCC-C
Confidence            88999999999999999875442             1   22332 2      2355554  5666666544444343 3


Q ss_pred             cHHHHHHHHHHHHHHh-c-hhhHHHHHHHHHHHHHHHHHHHhC--CCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhc
Q psy10669        199 HNHAIGAIATAMLQAQ-S-DEFKSYQAQVKANASHLSDEMIKR--GYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEI  274 (337)
Q Consensus       199 ~~~~iaala~a~~e~~-~-~~~~~y~~~v~~na~~l~~~L~~~--G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~  274 (337)
                      ++...+++..++.... + ...++.++++.++.++|.+.|.+.  |+++.. ...+..+++.+.. +.+..++.+.|.+.
T Consensus       280 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~l~~~l~~~  357 (407)
T 2zc0_A          280 PAISQYIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKALENHLPNAEFTK-PIAGMFVMFFLPE-GADGISFANELMER  357 (407)
T ss_dssp             CHHHHHHHHHHHHTTHHHHHTTTTHHHHHHHHHHHHHHHHHHHCTTSCBCC-CSBSSEEEEECST-TCCHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEec-CCCcEEEEEEcCC-CCCHHHHHHHHHHh
Confidence            4555555555554321 1 234567788889999999999873  777653 2345577788754 45777888888775


Q ss_pred             -Cceecc
Q psy10669        275 -AIACNK  280 (337)
Q Consensus       275 -gI~v~~  280 (337)
                       ||.+.+
T Consensus       358 ~gi~v~~  364 (407)
T 2zc0_A          358 EGVVVVP  364 (407)
T ss_dssp             TCEECBC
T ss_pred             CCeEEEC
Confidence             999875

>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*

Probab=99.15  E-value=1.5e-09  Score=106.41  Aligned_cols=237  Identities=19%  Similarity=0.185  Sum_probs=144.4

Q ss_pred             eeeeccCCC-----CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCch
Q psy10669         33 IELIASENF-----TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSP  107 (337)
Q Consensus        33 i~l~asen~-----~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~  107 (337)
                      |.+.+.+++     .+|.|.+++...+. ++.  ..+ +.| ......+++    +++++++|.+.     .+..+||+.
T Consensus        79 lD~~sg~~~~~lgh~~p~v~~Ai~~~~~-~~~--~~~-~~~-~~~~~~~l~----~~la~~~g~~~-----v~~~~sGse  144 (439)
T 2oat_A           79 FDFLSSYSAVNQGHCHPKIVNALKSQVD-KLT--LTS-RAF-YNNVLGEYE----EYITKLFNYHK-----VLPMNTGVE  144 (439)
T ss_dssp             EESSGGGGTTTTCBTCHHHHHHHHHHHT-TCS--CCC-TTS-EESSHHHHH----HHHHHHHTCSE-----EEEESSHHH
T ss_pred             EEccCCcccccCCCCCHHHHHHHHHHHH-hcC--ccc-Ccc-CCHHHHHHH----HHHHHhcCCCE-----EEEeCCHHH
Confidence            444444444     58999999987644 332  222 223 234445565    47778888542     345566799


Q ss_pred             hHHHHHHhhC-----------C-c-------------------------------------------------ccc--cc
Q psy10669        108 ANFAVCEKAL-----------P-T-------------------------------------------------NNA--RF  124 (337)
Q Consensus       108 AN~~v~~aLl-----------~-~-------------------------------------------------~~a--~p  124 (337)
                      ||..++.++.           + +                                                 .+.  ++
T Consensus       145 A~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~~d~~~le~~l~~~~~  224 (439)
T 2oat_A          145 AGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPYNDLPALERALQDPNV  224 (439)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECSSCHHHHHHHTTSTTE
T ss_pred             HHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCCCCHHHHHHHhCCCCE
Confidence            9888777653           1 1                                                 000  14


Q ss_pred             cEEEEcCcccc---ccc----ChHHHHHHhhhcCCeEEEecccccccc--c--------e----eeeecc-------CCc
Q psy10669        125 DFLSSGTTCYS---RCL----DYARFRQICDETDSIMFADMSHISGLI--A--------G----VKGVTK-------TGE  176 (337)
Q Consensus       125 klII~~~S~~~---~~~----d~~~l~eia~~~ga~l~vD~AH~~Gli--~--------g----~~~T~~-------~Gg  176 (337)
                      ++|++.+ +++   ...    ++++|+++|+++|++|++|++| .|+-  +        +    +.+..|       .+|
T Consensus       225 ~~vi~ep-~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~-~g~g~~g~~~~~~~~~~~~Di~t~sK~l~~G~~~~G  302 (439)
T 2oat_A          225 AAFMVEP-IQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQ-TGLARTGRWLAVDYENVRPDIVLLGKALSGGLYPVS  302 (439)
T ss_dssp             EEEEECS-SBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTT-TTTTTTSSSSGGGGGTCCCSEEEECGGGGTTSSCCE
T ss_pred             EEEEEEC-CCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccc-cCCccCCcchhHHHhCCCCcEEEecccccCCCCCeE
Confidence            6788764 332   233    7889999999999999999999 4532  1        1    111112       123


Q ss_pred             hhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEec-CCCCCeEE
Q psy10669        177 KILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVT-GGTDVHLI  253 (337)
Q Consensus       177 ~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~-~~t~~h~v  253 (337)
                      +++.  ++.+.+.+......+ +.++...++...++..+.+   .++.+++.++.++|.+.|.+.+++++. ......++
T Consensus       303 ~v~~~~~~~~~l~~~~~~~t~-~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~g~~~  378 (439)
T 2oat_A          303 AVLCDDDIMLTIKPGEHGSTY-GGNPLGCRVAIAALEVLEE---ENLAENADKLGIILRNELMKLPSDVVTAVRGKGLLN  378 (439)
T ss_dssp             EEEECHHHHTTSCTTSSCCSS-TTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHTTSCTTTEEEEEEETTEE
T ss_pred             EEEECHHHHhccCCCCcccCC-CcCHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeeeEE
Confidence            4443  454444432222333 3456666666666666532   257889999999999999887665322 11245677


Q ss_pred             EEEecCCC-cchHHHHHHHhhcCceeccC--cccchhhh
Q psy10669        254 LIDLRKNK-LTGSKVELVLEEIAIACNKN--TGISLAAE  289 (337)
Q Consensus       254 ~V~~~~~~-~~~~~~~~~L~~~gI~v~~~--~girig~~  289 (337)
                      .+.+.... .+..++.+.|.+.||.+.+.  ..+||..+
T Consensus       379 ~v~l~~~~~~~~~~l~~~l~~~Gv~v~~~~~~~iRi~~~  417 (439)
T 2oat_A          379 AIVIKETKDWDAWKVCLRLRDNGLLAKPTHGDIIRFAPP  417 (439)
T ss_dssp             EEEECCCSSCCHHHHHHHHHHTTEECCBSSSSEEEECCC
T ss_pred             EEEEecCccHHHHHHHHHHHHCCeEEecCCCCEEEEECc
Confidence            78876531 35677888888889999874  26888644

>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A

Probab=99.15  E-value=2.6e-09  Score=102.27  Aligned_cols=226  Identities=12%  Similarity=0.082  Sum_probs=141.0

Q ss_pred             CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhC-----
Q psy10669         43 SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL-----  117 (337)
Q Consensus        43 ~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl-----  117 (337)
                      +|.|.+++...+.. +.  ..+.+ | ......+++    +++++++|.+.     .+..+||++||..++.+++     
T Consensus        57 ~p~v~~a~~~~~~~-~~--~~~~~-~-~~~~~~~l~----~~la~~~~~~~-----v~~~~gg~~a~~~al~~~~~~~~~  122 (406)
T 4adb_A           57 HPELREALNEQASK-FW--HTGNG-Y-TNEPVLRLA----KKLIDATFADR-----VFFCNSGAEANEAALKLARKFAHD  122 (406)
T ss_dssp             CHHHHHHHHHHHTT-CS--CCCTT-S-CCHHHHHHH----HHHHHHSSCSE-----EEEESSHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHh-cc--cccCC-c-CCHHHHHHH----HHHHhhCCCCe-----EEEeCcHHHHHHHHHHHHHHHHHh
Confidence            89999999876543 21  11122 2 223334444    57889998763     3555566899888777763     


Q ss_pred             ----C-c-----------------------------------------------ccc---cccEEEEcCccccccc----
Q psy10669        118 ----P-T-----------------------------------------------NNA---RFDFLSSGTTCYSRCL----  138 (337)
Q Consensus       118 ----~-~-----------------------------------------------~~a---~pklII~~~S~~~~~~----  138 (337)
                          + +                                               +.+   ++++|++.+ +++.-+    
T Consensus       123 ~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~p-~np~g~~~~~  201 (406)
T 4adb_A          123 RYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAYNDINSASALIDDSTCAVIVEP-IQGEGGVVPA  201 (406)
T ss_dssp             HTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECTTCHHHHHTTCSTTEEEEEECS-EETTTTSEEC
T ss_pred             cCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCCCcHHHHHHHhcCCeEEEEEeC-CcCCCCCccC
Confidence                2 1                                               000   268888884 565333    


Q ss_pred             ---ChHHHHHHhhhcCCeEEEeccccccc--cc--------e-----eeeecc------CCchhhh--hHHHHHhhccCC
Q psy10669        139 ---DYARFRQICDETDSIMFADMSHISGL--IA--------G-----VKGVTK------TGEKILY--DYEEKINNAVFP  192 (337)
Q Consensus       139 ---d~~~l~eia~~~ga~l~vD~AH~~Gl--i~--------g-----~~~T~~------~Gg~i~~--~l~~~i~~~~~p  192 (337)
                         ++++|.++|+++|++|++|++|+ |+  .+        +     +++ +|      .+|+++.  ++.+.+.+....
T Consensus       202 ~~~~l~~l~~l~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~d~~t~-sK~~~~G~r~G~~~~~~~~~~~~~~~~~~  279 (406)
T 4adb_A          202 SNAFLQGLRELCNRHNALLIFDEVQT-GVGRTGELYAYMHYGVTPDLLTT-AKALGGGFPVGALLATEECARVMTVGTHG  279 (406)
T ss_dssp             CHHHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSHHHHHTCCCSEEEE-CGGGGTTSCCEEEEECHHHHHTCCTTSSC
T ss_pred             CHHHHHHHHHHHHHcCCEEEEecccc-CCCccchhHHHHhcCCCCCEEEe-chhhcCCCCeEEEEEcHHHHhhhccCCcC
Confidence               67788899999999999999996 33  11        1     222 22      2355544  466666544333


Q ss_pred             CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCC--EEec-CCCCCeEEEEEecCC-CcchHHHH
Q psy10669        193 SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGY--HVVT-GGTDVHLILIDLRKN-KLTGSKVE  268 (337)
Q Consensus       193 ~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~--~v~~-~~t~~h~v~V~~~~~-~~~~~~~~  268 (337)
                      ..+ +.++...++...++..+..   +++.+++.++.++|.+.|.+.+.  .+.. ......++.+.+... ..+..++.
T Consensus       280 ~~~-~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  355 (406)
T 4adb_A          280 TTY-GGNPLASAVAGKVLELINT---PEMLNGVKQRHDWFVERLNTINHRYGLFSEVRGLGLLIGCVLNADYAGQAKQIS  355 (406)
T ss_dssp             CSS-TTCHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEETTEEEEEECTTTTTCHHHHH
T ss_pred             CCC-CCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEEEEEEEEEEeCCcHHHHHHHH
Confidence            323 5667777777777766532   67889999999999999987432  1111 012345667777542 12567788


Q ss_pred             HHHhhcCceeccCc--ccchhhh
Q psy10669        269 LVLEEIAIACNKNT--GISLAAE  289 (337)
Q Consensus       269 ~~L~~~gI~v~~~~--girig~~  289 (337)
                      +.|.+.||.+.+..  .+||+.+
T Consensus       356 ~~l~~~gi~v~~~~~~~iRi~~~  378 (406)
T 4adb_A          356 QEAAKAGVMVLIAGGNVVRFAPA  378 (406)
T ss_dssp             HHHHHTTEECEESSTTEEEECCC
T ss_pred             HHHHHCCcEEeecCCCeEEEECC
Confidence            88888899998643  7888543

>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3

Probab=99.13  E-value=4.5e-09  Score=100.35  Aligned_cols=235  Identities=13%  Similarity=0.068  Sum_probs=145.2

Q ss_pred             cceeeeccCCC--CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHH-HHHHHHHHHHhhcC--CCCCCCcceeecCCC
Q psy10669         31 NGIELIASENF--TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDE-IEIVAQQRSLKAFN--LDPEQWGCNVQPYSG  105 (337)
Q Consensus        31 ~~i~l~asen~--~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~-lE~~~~~~~a~lfg--~~~~~~~~~v~~~Sg  105 (337)
                      .-|.|...++-  .+|.|.+++...+... ..+++     .+   ..+ ++....+.+.+.+|  .+.    .+|.+++|
T Consensus        29 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~-----~~---~~~~lr~~la~~l~~~~g~~~~~----~~v~~t~g   95 (390)
T 1d2f_A           29 DLLPFTISDMDFATAPCIIEALNQRLMHG-VFGYS-----RW---KNDEFLAAIAHWFSTQHYTAIDS----QTVVYGPS   95 (390)
T ss_dssp             -CEECCSSSCSSCCCHHHHHHHHHHHTTC-CCCCC-----CS---CCHHHHHHHHHHHHHHSCCCCCG----GGEEEESC
T ss_pred             CeeEeeecCCCCCCCHHHHHHHHHHHhCC-CCCCC-----CC---ChHHHHHHHHHHHHHhcCCCCCH----HHEEEcCC
Confidence            45666555542  3799999998765321 11221     11   223 54333344555567  443    25777777


Q ss_pred             -chhHHHHHHhhCCc--------------------------------c-----c---------c--cccEEEEc-Ccc-c
Q psy10669        106 -SPANFAVCEKALPT--------------------------------N-----N---------A--RFDFLSSG-TTC-Y  134 (337)
Q Consensus       106 -t~AN~~v~~aLl~~--------------------------------~-----~---------a--~pklII~~-~S~-~  134 (337)
                       ++|+..++.+++++                                +     .         .  +|++|++. +.+ .
T Consensus        96 ~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~npt  175 (390)
T 1d2f_A           96 VIYMVSELIRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPT  175 (390)
T ss_dssp             HHHHHHHHHHHSSCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTT
T ss_pred             HHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHCCCEEEEeecccCCCccccCHHHHHHHhccCCCeEEEEeCCCCCC
Confidence             67888888888654                                1     0         0  25777754 322 2


Q ss_pred             ccccC---hHHHHHHhhhcCCeEEEeccccccccce--------e-------eeec-c----CC---chhhh---hHHHH
Q psy10669        135 SRCLD---YARFRQICDETDSIMFADMSHISGLIAG--------V-------KGVT-K----TG---EKILY---DYEEK  185 (337)
Q Consensus       135 ~~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~g--------~-------~~T~-~----~G---g~i~~---~l~~~  185 (337)
                      +...|   +++|.++|+++|+++++|++|..+...|        +       .+|. |    .|   |+++.   ++.+.
T Consensus       176 G~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~~s~sK~~~~~G~r~G~~~~~~~~~~~~  255 (390)
T 1d2f_A          176 GKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWALLTSGSKSFNIPALTGAYGIIENSSSRDA  255 (390)
T ss_dssp             CCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEEEECSHHHHTCGGGCCEEEEECSHHHHHH
T ss_pred             CcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHHHcchhhHhhccCccHhhcccChhheEEEECCHHHHHH
Confidence            45555   6778899999999999999998643321        0       2222 2    12   55553   46666


Q ss_pred             HhhccC-CCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-C-CCEEecCCCCCeEEEEEecCCCc
Q psy10669        186 INNAVF-PSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-R-GYHVVTGGTDVHLILIDLRKNKL  262 (337)
Q Consensus       186 i~~~~~-p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~-G~~v~~~~t~~h~v~V~~~~~~~  262 (337)
                      +..... ...+++++++..++...++... ....++.++++.++.++|.+.|.+ . |+++..+ ..+.++++++...+.
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~~~~~~~~~~~~  333 (390)
T 1d2f_A          256 YLSALKGRDGLSSPSVLALTAHIAAYQQG-APWLDALRIYLKDNLTYIADKMNAAFPELNWQIP-QSTYLAWLDLRPLNI  333 (390)
T ss_dssp             HHHHHHTTSCCCSCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCCCC-SBCSEEEEECGGGCC
T ss_pred             HHHHHhhhcccCCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHhhCCCCEEecC-CccEEEEEEccccCC
Confidence            654322 2234577888877777777653 234567788899999999999988 3 8877642 234555688865445


Q ss_pred             chHHHHHHHh-hcCceecc
Q psy10669        263 TGSKVELVLE-EIAIACNK  280 (337)
Q Consensus       263 ~~~~~~~~L~-~~gI~v~~  280 (337)
                      +..++.+.|. +.||.+.+
T Consensus       334 ~~~~l~~~l~~~~gi~v~~  352 (390)
T 1d2f_A          334 DDNALQKALIEQEKVAIMP  352 (390)
T ss_dssp             CHHHHHHHHHHTTCEECEE
T ss_pred             CHHHHHHHHHHHcCEEeeC
Confidence            6777888887 68999875

>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A

Probab=99.13  E-value=9.1e-10  Score=107.71  Aligned_cols=229  Identities=13%  Similarity=0.073  Sum_probs=137.9

Q ss_pred             CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhC----
Q psy10669         42 TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL----  117 (337)
Q Consensus        42 ~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl----  117 (337)
                      .+|.|.+|+...+. ++.  ..+ +.| ......+++    +++++++|.+.     .+..+||+.||..++.++.    
T Consensus        82 ~~p~v~~ai~~~~~-~~~--~~~-~~~-~~~~~~~l~----~~la~~~g~~~-----v~~~~sGseA~~~al~~a~~~~~  147 (433)
T 1z7d_A           82 CHPNILNAMINQAK-NLT--ICS-RAF-FSVPLGICE----RYLTNLLGYDK-----VLMMNTGAEANETAYKLCRKWGY  147 (433)
T ss_dssp             TCHHHHHHHHHHHT-TCS--CCC-TTS-EEHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHH-hCC--Ccc-CCc-CCHHHHHHH----HHHHhhcCCCe-----EEEeCCHHHHHHHHHHHHHHHhh
Confidence            58999999987643 332  222 222 222334444    57788888653     3455667999888777642    


Q ss_pred             -------C-c-----------------------------------------------c--c-c-cccEEEEcCccc--cc
Q psy10669        118 -------P-T-----------------------------------------------N--N-A-RFDFLSSGTTCY--SR  136 (337)
Q Consensus       118 -------~-~-----------------------------------------------~--~-a-~pklII~~~S~~--~~  136 (337)
                             + +                                               +  + . ++++||+.+...  +.
T Consensus       148 ~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~~d~~~le~~l~~~~~~~vi~ep~~~~~G~  227 (433)
T 1z7d_A          148 EVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPYDDLEALEEELKDPNVCAFIVEPIQGEAGV  227 (433)
T ss_dssp             HTSCCCTTCCEEEEETTC--------------------------CEEEECTTCHHHHHHHHTSTTEEEEEECSSBSTTTS
T ss_pred             hccCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCCCCHHHHHHHhCCCCEEEEEEECCCCCCCc
Confidence                   1 1                                               0  0 0 146888764321  22


Q ss_pred             cc----ChHHHHHHhhhcCCeEEEecccccccc--c--------e----eeeecc-------CCchhhh--hHHHHHhhc
Q psy10669        137 CL----DYARFRQICDETDSIMFADMSHISGLI--A--------G----VKGVTK-------TGEKILY--DYEEKINNA  189 (337)
Q Consensus       137 ~~----d~~~l~eia~~~ga~l~vD~AH~~Gli--~--------g----~~~T~~-------~Gg~i~~--~l~~~i~~~  189 (337)
                      ..    ++++|+++|+++|++|++|++|+ |+-  +        +    +.+..|       .+|+++.  ++.+.+.+.
T Consensus       228 ~~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~g~~g~~~~~~~~~~~~di~t~sK~l~~G~~~~G~v~~~~~~~~~l~~~  306 (433)
T 1z7d_A          228 IVPSDNYLQGVYDICKKYNVLFVADEVQT-GLGRTGKLLCVHHYNVKPDVILLGKALSGGHYPISAVLANDDIMLVIKPG  306 (433)
T ss_dssp             BCCCTTHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSGGGGGTCCCSEEEECGGGGTTSSCCEEEEECHHHHTTCCTT
T ss_pred             cCCCHHHHHHHHHHHHHcCCEEEEecCcc-CCCcCCcchhhHhcCCCCCEEEECccccCCCCCeEEEEECHHHHhhhccc
Confidence            22    77899999999999999999996 531  1        1    111112       1233333  454444432


Q ss_pred             cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCEEec-CCCCCeEEEEEecCCCcchHH
Q psy10669        190 VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYHVVT-GGTDVHLILIDLRKNKLTGSK  266 (337)
Q Consensus       190 ~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~v~~-~~t~~h~v~V~~~~~~~~~~~  266 (337)
                      .....+ +.++...++...++..+.+   .++.+++.++.++|.+.|.+.  ++.+.. ......++++.+.....+..+
T Consensus       307 ~~~~t~-~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~  382 (433)
T 1z7d_A          307 EHGSTY-GGNPLAASICVEALNVLIN---EKLCENAEKLGGPFLENLKRELKDSKIVRDVRGKGLLCAIEFKNELVNVLD  382 (433)
T ss_dssp             CCCCTT-TTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEETTEEEEEECTTTCCHHH
T ss_pred             cccccC-CCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeeeeEEEEEEccChhHHHH
Confidence            223333 4466666666666766532   257888999999999999874  554321 012456778888653235677


Q ss_pred             HHHHHhhcCceeccC--cccchhhh
Q psy10669        267 VELVLEEIAIACNKN--TGISLAAE  289 (337)
Q Consensus       267 ~~~~L~~~gI~v~~~--~girig~~  289 (337)
                      +.+.|.+.||.+.+.  ..+||..+
T Consensus       383 ~~~~l~~~Gv~v~~~~~~~iRi~~~  407 (433)
T 1z7d_A          383 ICLKLKENGLITRDVHDKTIRLTPP  407 (433)
T ss_dssp             HHHHHHHTTEECCEETTTEEEECCC
T ss_pred             HHHHHHHCCeEEecCCCCEEEEECC
Confidence            888888889999863  36888544

>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}

Probab=99.12  E-value=2.9e-09  Score=102.01  Aligned_cols=225  Identities=13%  Similarity=0.064  Sum_probs=135.5

Q ss_pred             CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhC-----
Q psy10669         43 SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL-----  117 (337)
Q Consensus        43 ~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl-----  117 (337)
                      +|.|.+++...+. ++..++  +++  ......+++    +++++++|.+.     .+..+||+.||..++.++.     
T Consensus        54 ~p~v~~a~~~~~~-~~~~~~--~~~--~~~~~~~l~----~~la~~~~~~~-----v~~~~gg~ea~~~al~~~~~~~~~  119 (395)
T 3nx3_A           54 HAKFNAKIKAQVD-KLLHTS--NLY--YNENIAAAA----KNLAKASALER-----VFFTNSGTESIEGAMKTARKYAFN  119 (395)
T ss_dssp             CHHHHHHHHHHHT-TCSCCC--TTS--BCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHH-hccccc--ccc--CCHHHHHHH----HHHHHhcCCCe-----EEEeCCHHHHHHHHHHHHHHHhhc
Confidence            8999999987644 322121  111  123334454    57788888542     3555666999888776552     


Q ss_pred             ---C-c-----------------------------------------------ccc---cccEEEEcCccccc---ccC-
Q psy10669        118 ---P-T-----------------------------------------------NNA---RFDFLSSGTTCYSR---CLD-  139 (337)
Q Consensus       118 ---~-~-----------------------------------------------~~a---~pklII~~~S~~~~---~~d-  139 (337)
                         + +                                               +.+   ++++|++.+ +++.   ..+ 
T Consensus       120 ~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~-~~~~~G~~~~~  198 (395)
T 3nx3_A          120 KGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKYNDISSVEKLVNEKTCAIILES-VQGEGGINPAN  198 (395)
T ss_dssp             TTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECTTCHHHHHTTCCTTEEEEEEES-EECTTSCEECC
T ss_pred             cCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCCCCHHHHHHhccCCeEEEEEeC-ccCCCCcccCC
Confidence               0 0                                               001   156777764 4433   333 


Q ss_pred             ---hHHHHHHhhhcCCeEEEecccc-ccccc--------ee---eeec-c------CCchhhh--hH-HHHHhhccCCCC
Q psy10669        140 ---YARFRQICDETDSIMFADMSHI-SGLIA--------GV---KGVT-K------TGEKILY--DY-EEKINNAVFPSL  194 (337)
Q Consensus       140 ---~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g~---~~T~-~------~Gg~i~~--~l-~~~i~~~~~p~~  194 (337)
                         +++|.++|+++|++|++|++|. .|-.+        ++   ..|. |      ..|+++.  ++ .+.+.+......
T Consensus       199 ~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~d~~t~sK~~~~G~~~G~~~~~~~~~~~~~~~~~~~~~  278 (395)
T 3nx3_A          199 KDFYKALRKLCDEKDILLIADEIQCGMGRSGKFFAYEHAQILPDIMTSAKALGCGLSVGAFVINQKVASNSLEAGDHGST  278 (395)
T ss_dssp             HHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGTTTSCCEEEEECHHHHHHHSCTTCCSSC
T ss_pred             HHHHHHHHHHHHHcCCEEEEEecccCCCcCCcchhHHhcCCCCCEEEecccccCCCceEEEEEchhhhhhhcCCcccCCC
Confidence               7889999999999999999997 43322        10   1111 2      1234433  45 666655432222


Q ss_pred             CCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-----CCEEecCCCCCeEEEEEecCCCcchHHHHH
Q psy10669        195 QGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-----GYHVVTGGTDVHLILIDLRKNKLTGSKVEL  269 (337)
Q Consensus       195 ~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-----G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~  269 (337)
                      + +.++...++...++..+..   +++.+++.++.+++++.|.+.     ++....  ....++++.+.... +..++.+
T Consensus       279 ~-~~~~~~~~aa~aal~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~g~~~~~~~~~~~-~~~~~~~  351 (395)
T 3nx3_A          279 Y-GGNPLVCAGVNAVFEIFKE---EKILENVNKLTPYLEQSLDELINEFDFCKKRK--GLGFMQGLSLDKSV-KVAKVIQ  351 (395)
T ss_dssp             B-SCCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEE--EETTEEEEEECTTS-CHHHHHH
T ss_pred             C-CCCHHHHHHHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEE--eEEEEEEEEeCCcc-hHHHHHH
Confidence            3 4566666666666665532   366778888888888888762     232222  34567778886543 5777888


Q ss_pred             HHhhcCceeccCc--ccchhhh
Q psy10669        270 VLEEIAIACNKNT--GISLAAE  289 (337)
Q Consensus       270 ~L~~~gI~v~~~~--girig~~  289 (337)
                      .|.+.||.+.+..  .+||..+
T Consensus       352 ~l~~~Gi~v~~~~~~~iRi~~~  373 (395)
T 3nx3_A          352 KCQENALLLISCGENDLRFLPP  373 (395)
T ss_dssp             HHHHTTEECEEETTTEEEECCC
T ss_pred             HHHHCCCEEecCCCCEEEEECC
Confidence            8888899988643  6888643

>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*

Probab=99.12  E-value=1.4e-09  Score=105.27  Aligned_cols=239  Identities=12%  Similarity=0.094  Sum_probs=147.9

Q ss_pred             ceeeec-cCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhH
Q psy10669         32 GIELIA-SENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPAN  109 (337)
Q Consensus        32 ~i~l~a-sen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN  109 (337)
                      .+.|-. +....+|.|++++...+.+.  .++|...+..+.. ..+....+++.+++++|++.    .+|.+++| +.|+
T Consensus        19 ~~~Ld~~~~~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~l~~~la~~~g~~~----~~v~~~~g~t~a~   91 (432)
T 3a9z_A           19 KVYMDYNATTPLEPEVIQAVTEAMKEA--WGNPSSSYVAGRK-AKDIINTARASLAKMIGGKP----QDIIFTSGGTESN   91 (432)
T ss_dssp             CEECBTTTCCCCCHHHHHHHHHHHHHC--CSCTTCSSHHHHH-HHHHHHHHHHHHHHHHTCCG----GGEEEESCHHHHH
T ss_pred             cEEeeCCccCCCCHHHHHHHHHHHHHh--cCCCccCcHHHHH-HHHHHHHHHHHHHHHcCCCc----CeEEEeCChHHHH
Confidence            344433 33467999999998776542  3666654433322 23444556689999999874    35778777 7887


Q ss_pred             HHHHHhhC----------C-------------------------------------c--------------------ccc
Q psy10669        110 FAVCEKAL----------P-------------------------------------T--------------------NNA  122 (337)
Q Consensus       110 ~~v~~aLl----------~-------------------------------------~--------------------~~a  122 (337)
                      ..++.+++          .                                     .                    +.+
T Consensus        92 ~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~  171 (432)
T 3a9z_A           92 NLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKVNGQVEVEDILAA  171 (432)
T ss_dssp             HHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCTTTSSCCHHHHHHT
T ss_pred             HHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCcccCCcCHHHHHHh
Confidence            66666553          1                                     0                    001


Q ss_pred             ---cccEEEEcCccc--ccccChHHHHHHhhhcC----------CeEEEeccccccccc---------eeeeec-c----
Q psy10669        123 ---RFDFLSSGTTCY--SRCLDYARFRQICDETD----------SIMFADMSHISGLIA---------GVKGVT-K----  173 (337)
Q Consensus       123 ---~pklII~~~S~~--~~~~d~~~l~eia~~~g----------a~l~vD~AH~~Gli~---------g~~~T~-~----  173 (337)
                         ++++|++....+  +...|+++|.++|+++|          +++++|++|..|...         .++++. |    
T Consensus       172 i~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~~~~~~~~~~~d~~~~s~~K~~g~  251 (432)
T 3a9z_A          172 VRPTTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVDVEDLGVDFLTIVGHKFYGP  251 (432)
T ss_dssp             CCTTEEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTTSCCCHHHHCCSEEEEEGGGTTCC
T ss_pred             ccCCceEEEEECcccCcccccCHHHHHHHHHhcCcccccccCCceEEEEEchhhhCCcccChhhcCCCEEEEehhHhcCC
Confidence               267787764333  68899999999999999          999999999888654         123333 3    


Q ss_pred             CCchhhh--hH-HHHHhhccC------CCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-CCCEE
Q psy10669        174 TGEKILY--DY-EEKINNAVF------PSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-RGYHV  243 (337)
Q Consensus       174 ~Gg~i~~--~l-~~~i~~~~~------p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~G~~v  243 (337)
                      ..|+++.  ++ ...+.+..+      ....++++++.++++..++..+. ..+++.++++.++.++|.+.|.+ .|+++
T Consensus       252 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aal~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~g~~~  330 (432)
T 3a9z_A          252 RIGALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLVS-ENCETYEAHMRDIRDYLEERLEAEFGKRI  330 (432)
T ss_dssp             SCEEEEETTBTTTBCCCCSCCSSCGGGGTSCSCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHGGGE
T ss_pred             cceEEEEccccccCCcCceeecCCccccccCCCcCHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHHhccCCcE
Confidence            2344443  22 112221111      01236788889988888887764 35678899999999999999988 47665


Q ss_pred             ec-CC-----CCCeEEEEEecCCCcchHHHHHHHhhcCceecc
Q psy10669        244 VT-GG-----TDVHLILIDLRKNKLTGSKVELVLEEIAIACNK  280 (337)
Q Consensus       244 ~~-~~-----t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~  280 (337)
                      .. +.     .-.+++.+.+...+.++.++.+.|  .||.++.
T Consensus       331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~~~  371 (432)
T 3a9z_A          331 HLNSRFPGVERLPNTCNFSIQGSQLRGYMVLAQC--QTLLASV  371 (432)
T ss_dssp             EESSCCTTCCBCTTEEEEEECSTTCCHHHHHHHC--SSEECBS
T ss_pred             EEeCCCCcccCCCCEEEEEeCCCCCcHHHHHHHh--cCeEEec
Confidence            41 11     112355566654333454444444  2555544

>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6

Probab=99.11  E-value=2.7e-09  Score=105.87  Aligned_cols=208  Identities=10%  Similarity=0.007  Sum_probs=128.2

Q ss_pred             cCccchHHHHHHHHHHHHHhhcCCCCCC------CcceeecCCCchhHHHHHHhhC--------------------Cc--
Q psy10669         68 YGGNQFIDEIEIVAQQRSLKAFNLDPEQ------WGCNVQPYSGSPANFAVCEKAL--------------------PT--  119 (337)
Q Consensus        68 ~~G~~~~~~lE~~~~~~~a~lfg~~~~~------~~~~v~~~Sgt~AN~~v~~aLl--------------------~~--  119 (337)
                      |.......++|..+.+.++++||.+...      ++..+..++||+||+..+.+..                    ++  
T Consensus       105 ~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~  184 (475)
T 3k40_A          105 WIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLV  184 (475)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEE
T ss_pred             ccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCeE
Confidence            3444566789998889999999987520      1124556677999977666541                    00  


Q ss_pred             -----------------------------------cc--c---------cccEEEEcC--cccccccChHHHHHHhhhcC
Q psy10669        120 -----------------------------------NN--A---------RFDFLSSGT--TCYSRCLDYARFRQICDETD  151 (337)
Q Consensus       120 -----------------------------------~~--a---------~pklII~~~--S~~~~~~d~~~l~eia~~~g  151 (337)
                                                         .+  +         .|.+|+++.  +..+..-|+++|.++|+++|
T Consensus       185 vi~s~~~H~s~~~~~~~~g~~~~~v~~d~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~l~~I~~la~~~~  264 (475)
T 3k40_A          185 GYCSDQAHSSVERAGLLGGVKLRSVQSENHRMRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYLDECGPVGNKHN  264 (475)
T ss_dssp             EEEETTSCHHHHHHHHHHTCEEEEECCBTTBCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTT
T ss_pred             EEECCCchHHHHHHHHHcCCceEEEECCCCCcCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCCHHHHHHHHHHhC
Confidence                                               00  0         045566553  33568889999999999999


Q ss_pred             CeEEEeccccccccc---------e------eeeeccC------C-chhh-h--h-HHHHHhh---ccCC----------
Q psy10669        152 SIMFADMSHISGLIA---------G------VKGVTKT------G-EKIL-Y--D-YEEKINN---AVFP----------  192 (337)
Q Consensus       152 a~l~vD~AH~~Gli~---------g------~~~T~~~------G-g~i~-~--~-l~~~i~~---~~~p----------  192 (337)
                      ++++||+||+.|.+.         |      ++++.||      | |.++ .  + +.+.+..   .++.          
T Consensus       265 ~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~  344 (475)
T 3k40_A          265 LWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVNFDCSAMWLKDPSWVVNAFNVDPLYLKHDMQGSAPDYR  344 (475)
T ss_dssp             CEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESSGGGC-----------------------
T ss_pred             CeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccCCCCceEEEEEeCHHHHHHHhcCCccccCCCcCCCCCCcc
Confidence            999999999987542         1      2233222      2 3332 2  1 2221110   0000          


Q ss_pred             --CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCCCcchHHHHH
Q psy10669        193 --SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKNKLTGSKVEL  269 (337)
Q Consensus       193 --~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~  269 (337)
                        .+.++-. ....++..++..+....++++.++..+++++|++.|.+. |++++.. ....++.+.+...+....++.+
T Consensus       345 ~~~~~~sr~-~~~l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~l~~~-~~~~iv~f~~~~~~~~~~~l~~  422 (475)
T 3k40_A          345 HWQIPLGRR-FRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVADSRFELAAE-INMGLVCFRLKGSNERNEALLK  422 (475)
T ss_dssp             ----CCCGG-GTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEESSC-CBTTEEEEEESSCHHHHHHHHH
T ss_pred             cccccCCCc-ccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecC-CceEEEEEEeCCchHHHHHHHH
Confidence              0111111 234556666666655667899999999999999999995 9999853 4567777777543334566777


Q ss_pred             HHhhcCce
Q psy10669        270 VLEEIAIA  277 (337)
Q Consensus       270 ~L~~~gI~  277 (337)
                      .|.+.|+.
T Consensus       423 ~L~~~g~~  430 (475)
T 3k40_A          423 RINGRGHI  430 (475)
T ss_dssp             HHHHHTSC
T ss_pred             HHHhCCcE
Confidence            77765653

>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}

Probab=99.11  E-value=7.3e-09  Score=102.97  Aligned_cols=245  Identities=11%  Similarity=0.014  Sum_probs=140.9

Q ss_pred             eeeeccCCCC--------CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeec-C
Q psy10669         33 IELIASENFT--------SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQP-Y  103 (337)
Q Consensus        33 i~l~asen~~--------~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~-~  103 (337)
                      ..-+.+.+|+        +|.|.+++...+.|.      +...+.......++|..+++.++++||.+...   .+.+ +
T Consensus        95 ~~~~~~~~yl~~~~~~~~~~~v~~~~~~~~~n~------~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~---~~~~t~  165 (497)
T 2qma_A           95 AIFTQHPDCIAHLHTPPLMPAVAAEAMIAALNQ------SMDSWDQASSATYVEQKVVNWLCDKYDLSEKA---DGIFTS  165 (497)
T ss_dssp             SCCTTSTTBCSSSCCCCBHHHHHHHHHHHHHCC------CTTCGGGCHHHHHHHHHHHHHHHHHTTCCTTC---EEEEES
T ss_pred             CCCCCCCCeeEeCCCCCcHHHHHHHHHHHhhcc------cccchhhChHHHHHHHHHHHHHHHHhCCCCCC---CeEEcC
Confidence            3344555555        677777775443321      22223333456789999899999999986422   4555 4


Q ss_pred             CCchhHHHHHHhh----C-----------------Cc-----------------------------------------cc
Q psy10669        104 SGSPANFAVCEKA----L-----------------PT-----------------------------------------NN  121 (337)
Q Consensus       104 Sgt~AN~~v~~aL----l-----------------~~-----------------------------------------~~  121 (337)
                      +||.||..++.+.    +                 ++                                         .+
T Consensus       166 ggt~a~~~al~~ar~~~~~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~~~~~~d~~~L  245 (497)
T 2qma_A          166 GGTQSNQMGLMLARDWIADKLSGHSIQKLGLPDYADKLRIVCSKKSHFTVQKSASWMGLGEKAVMTVDANADGTMDITKL  245 (497)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHCCCHHHHCSCGGGGGEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCTTSSBCGGGH
T ss_pred             CchHHHHHHHHHHHHHHHHhhcccchhhcccccccCCeEEEECCCchHHHHHHHHHcCCCcccEEEEecCCCCcCCHHHH
Confidence            5588987766652    1                 11                                         00


Q ss_pred             c-----c------ccEEEEcCcc--cccccChHHHHHHhhhcCCeEEEeccccccccc--------e------eeeeccC
Q psy10669        122 A-----R------FDFLSSGTTC--YSRCLDYARFRQICDETDSIMFADMSHISGLIA--------G------VKGVTKT  174 (337)
Q Consensus       122 a-----~------pklII~~~S~--~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~--------g------~~~T~~~  174 (337)
                      .     .      |.+|+++...  .+...|+++|.++|+++|++++||+||+.|.+.        +      ++++.||
T Consensus       246 ~~~i~~~~~~~~~~~~vv~~~~~~~tG~~~~l~~I~~l~~~~~~~l~vD~a~~~~~~~~~~~~~~~gi~~~D~i~~s~hK  325 (497)
T 2qma_A          246 DEVIAQAKAEGLIPFAIVGTAGTTDHGAIDDLDFIADMAVKHDMWMHVDGAYGGALILSSHKSRLKGVERAHSISVDFHK  325 (497)
T ss_dssp             HHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGSTTGGGGTTGGGCSEEEEETTT
T ss_pred             HHHHHHHHHCCCcceEEEEcCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhhHHHHhCcchHhhcCcccCCEEEEcchh
Confidence            0     0      2256664222  468899999999999999999999999987653        1      2333343


Q ss_pred             ------C-chhh-h--hHHHHHhhccCCCCCC----CCcHHH----------HHHHHHHHHHHhchhhHHHHHHHHHHHH
Q psy10669        175 ------G-EKIL-Y--DYEEKINNAVFPSLQG----GPHNHA----------IGAIATAMLQAQSDEFKSYQAQVKANAS  230 (337)
Q Consensus       175 ------G-g~i~-~--~l~~~i~~~~~p~~~g----~~~~~~----------iaala~a~~e~~~~~~~~y~~~v~~na~  230 (337)
                            | |+++ .  .+.+.+... -+++.+    .+++..          ..++..++..+....++++.+++.++++
T Consensus       326 ~l~~p~~~G~l~~~~~~~~~~~~~~-~~yl~~~~~~~~~~~~~~~~~~r~~~al~~~~~l~~lg~~g~~~~~~~~~~~a~  404 (497)
T 2qma_A          326 LFYQTISCGALLVNDKSNFKFLLHH-ADYLNREHDELPNLVDKSIATTKRFDALKVFMTMQNVGPKALGDMYDHLLAQTL  404 (497)
T ss_dssp             TTCCCSSCEEEEESCGGGGGGGCC---------------------CCSCCCTHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred             ccCCCcceEEEEEeCHHHHHHhcCC-chhcCCccccCCCccccCCCCCCchhHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence                  1 3333 2  121222110 011111    122111          1123334544434556788999999999


Q ss_pred             HHHHHHHh-CCCEEecCCCCCeEEEEEecCCCcc----hHHHHHHHhhcCceeccCc------ccchhh
Q psy10669        231 HLSDEMIK-RGYHVVTGGTDVHLILIDLRKNKLT----GSKVELVLEEIAIACNKNT------GISLAA  288 (337)
Q Consensus       231 ~l~~~L~~-~G~~v~~~~t~~h~v~V~~~~~~~~----~~~~~~~L~~~gI~v~~~~------girig~  288 (337)
                      +|.+.|.+ .|++++.. ....++.+.+...+..    ..++.+.|.+.|+.+...+      .+||+.
T Consensus       405 ~l~~~L~~~~~~~~~~~-~~~~~v~f~~~~~~~~~~~l~~~l~~~l~~~G~~~~~~~~~~g~~~lRis~  472 (497)
T 2qma_A          405 EVADMIRTNDQFELLAE-PSLSTVLFRATHETADLDELNKALRLEALTRGIAVLGETIVDGKTALKFTI  472 (497)
T ss_dssp             HHHHHHHTCTTEEECSC-CSSSEEEEEECCSSSCHHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEEC
T ss_pred             HHHHHHhhCCCeEEEcC-CCceEEEEEEcCCccCHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEe
Confidence            99999998 49998742 4556777776543322    1345566666788875321      578764

>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1

Probab=99.10  E-value=9.7e-09  Score=98.76  Aligned_cols=247  Identities=13%  Similarity=0.064  Sum_probs=147.1

Q ss_pred             ccceeeeccCC-----CCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCC
Q psy10669         30 INGIELIASEN-----FTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYS  104 (337)
Q Consensus        30 ~~~i~l~asen-----~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~S  104 (337)
                      +..|.|...++     -.+|.+.+++...+.+.. .+      |.......+++....+.+.+.+|...+ . .+|.+++
T Consensus        38 ~~~i~l~~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~------y~~~~g~~~l~~~la~~l~~~~g~~~~-~-~~v~~t~  108 (406)
T 1xi9_A           38 IKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEGH-NY------YGDSEGLPELRKAIVEREKRKNGVDIT-P-DDVRVTA  108 (406)
T ss_dssp             CCCEECCCCCGGGTTCCCCHHHHHHHHHHHHTTC-CS------CCCTTCCHHHHHHHHHHHHHHHCCCCC-G-GGEEEES
T ss_pred             CCEEEecCCCCCcCCCCCCHHHHHHHHHHHhcCC-CC------CCCCCCcHHHHHHHHHHHHHhcCCCCC-H-HHEEEcC
Confidence            45667766666     247899999987654321 11      222222345554333444444443211 0 2466666


Q ss_pred             C-chhHHHHHHhhCCc-------------------------------c----------c----c-cccEEEEc-Ccc-cc
Q psy10669        105 G-SPANFAVCEKALPT-------------------------------N----------N----A-RFDFLSSG-TTC-YS  135 (337)
Q Consensus       105 g-t~AN~~v~~aLl~~-------------------------------~----------~----a-~pklII~~-~S~-~~  135 (337)
                      | +.|+..++.+++++                               .          +    . ++++|++. .++ .+
T Consensus       109 g~~~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG  188 (406)
T 1xi9_A          109 AVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITDRTKAIAVINPNNPTG  188 (406)
T ss_dssp             HHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHHHHHHCCTTEEEEEEESSCTTTC
T ss_pred             ChHHHHHHHHHHhCCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCCCcCCcCCHHHHHHhhCcCceEEEEECCCCCCC
Confidence            6 78998888888654                               0          0    0 25766665 222 24


Q ss_pred             cccC---hHHHHHHhhhcCCeEEEeccccccccc-----------e----eeeec-c----CC---chhh--h------h
Q psy10669        136 RCLD---YARFRQICDETDSIMFADMSHISGLIA-----------G----VKGVT-K----TG---EKIL--Y------D  181 (337)
Q Consensus       136 ~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~-----------g----~~~T~-~----~G---g~i~--~------~  181 (337)
                      ...+   +++|.++|+++|+++++|++|..+..+           +    ++++. |    .|   |+++  .      +
T Consensus       189 ~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~  268 (406)
T 1xi9_A          189 ALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLTKDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKLSE  268 (406)
T ss_dssp             CCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHCSSSCEEEEEESTTTTCCGGGCCEEEEEECTTCTTHH
T ss_pred             CCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHcCCCceEEEEeccccccCCCccEEEEEEEecCchhHHH
Confidence            5444   778889999999999999999764431           1    12232 2    12   5554  2      3


Q ss_pred             HHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCC
Q psy10669        182 YEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKN  260 (337)
Q Consensus       182 l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~  260 (337)
                      +.+.+.......  .++++...+++..++... ....++.++++.++.++|.+.|.+. |+++..+ ..+..+++.+...
T Consensus       269 l~~~l~~~~~~~--~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~~~~~~~~~~~  344 (406)
T 1xi9_A          269 VREAIDRLARIR--LCPNTPAQFAAIAGLTGP-MDYLKEYMKKLKERRDYIYKRLNEIPGISTTKP-QGAFYIFPKIEVG  344 (406)
T ss_dssp             HHHHHHHHHHHT--CCSCSHHHHHHHHHHHSC-CHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCC-CBSSEECCEECSC
T ss_pred             HHHHHHHHHHhh--cCCCHHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHHHhCCCCeeecC-CeeEEEEEecCcc
Confidence            455554322222  356666777776666433 2335677889999999999999886 8877642 2344555566532


Q ss_pred             -CcchHHHHHHHh-hcCceeccCc--------ccchhhh
Q psy10669        261 -KLTGSKVELVLE-EIAIACNKNT--------GISLAAE  289 (337)
Q Consensus       261 -~~~~~~~~~~L~-~~gI~v~~~~--------girig~~  289 (337)
                       +.+..++.+.|. +.||.+.+..        .+||+..
T Consensus       345 ~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~lRis~~  383 (406)
T 1xi9_A          345 PWKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFL  383 (406)
T ss_dssp             SCSSHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECC
T ss_pred             CCCCHHHHHHHHHHhCCEEEeCchhcCCCCCCEEEEEec
Confidence             346777777775 7899987532        5677643

>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*

Probab=99.10  E-value=7.5e-09  Score=100.18  Aligned_cols=262  Identities=10%  Similarity=0.022  Sum_probs=156.2

Q ss_pred             hhhhhcHHHHHHHHHHHhhcccceeeeccCCC--CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHh
Q psy10669         10 TLAQTDPELYSLIKKEKHRQINGIELIASENF--TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLK   87 (337)
Q Consensus        10 ~l~~~d~~~~~~~~~e~~rq~~~i~l~asen~--~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~   87 (337)
                      .+...++.++..+.+... +...|.|...++-  .+|.|.+++...+.. +..   +...|....-..+++....+.+.+
T Consensus        18 ~~~~~~~~~~~~~~~~~~-~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~-~~~---~~~~y~~~~g~~~l~~~la~~l~~   92 (429)
T 1yiz_A           18 RYQGSTKSVWVEYIQLAA-QYKPLNLGQGFPDYHAPKYALNALAAAANS-PDP---LANQYTRGFGHPRLVQALSKLYSQ   92 (429)
T ss_dssp             SCCCCTTCHHHHHHHHHH-HHCCEECCSSSCSSCCCHHHHHHHHHHHTC-SCG---GGGSCCCSSCCHHHHHHHHHHHHH
T ss_pred             HhhhCCchHHHHHHHHhc-cCCEEEecCCCCCCCCCHHHHHHHHHHHhc-ccc---CccCCCCCCCcHHHHHHHHHHHHH
Confidence            345556666666654332 3456777666553  379999999876543 110   111121111123454333345556


Q ss_pred             hcCCC-CCCCcceeecCCC-chhHHHHHHhhCCc--------------------------------c---------c--c
Q psy10669         88 AFNLD-PEQWGCNVQPYSG-SPANFAVCEKALPT--------------------------------N---------N--A  122 (337)
Q Consensus        88 lfg~~-~~~~~~~v~~~Sg-t~AN~~v~~aLl~~--------------------------------~---------~--a  122 (337)
                      .+|.+ .+++  +|.+++| ++|+..++.+++++                                .         .  .
T Consensus        93 ~~g~~~~~~~--~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  170 (429)
T 1yiz_A           93 LVDRTINPMT--EVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVL  170 (429)
T ss_dssp             HHTSCCCTTT--SEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCSSSSEEGGGCBC
T ss_pred             HhCCCCCCcC--CEEEecChHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCcccccccccccCccc
Confidence            66743 2221  4667666 78988888888654                                1         0  0


Q ss_pred             -----------cccEEEEcCccc--cccc---ChHHHHHHhhhcCCeEEEeccccccccc-----------------eee
Q psy10669        123 -----------RFDFLSSGTTCY--SRCL---DYARFRQICDETDSIMFADMSHISGLIA-----------------GVK  169 (337)
Q Consensus       123 -----------~pklII~~~S~~--~~~~---d~~~l~eia~~~ga~l~vD~AH~~Gli~-----------------g~~  169 (337)
                                 ++++|++..-.+  +...   ++++|.++|+++|+++++|++|......                 .+.
T Consensus       171 d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~  250 (429)
T 1yiz_A          171 DNNELEALFNEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITI  250 (429)
T ss_dssp             CHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEE
T ss_pred             CHHHHHHHhccCceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEE
Confidence                       156677642222  4555   4778889999999999999999842221                 112


Q ss_pred             eec-c----CC---chhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHH-----Hh-chhhHHHHHHHHHHHHHHH
Q psy10669        170 GVT-K----TG---EKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQ-----AQ-SDEFKSYQAQVKANASHLS  233 (337)
Q Consensus       170 ~T~-~----~G---g~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e-----~~-~~~~~~y~~~v~~na~~l~  233 (337)
                      ++. |    .|   |+++.  ++.+.+..... ....+.+++..+++..++..     .. ....++.++++.++.++|.
T Consensus       251 ~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  329 (429)
T 1yiz_A          251 GSAGKTFSLTGWKIGWAYGPEALLKNLQMVHQ-NCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMA  329 (429)
T ss_dssp             EEHHHHHTCGGGCCEEEESCHHHHHHHHHHHH-TTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHH
T ss_pred             ecchhccCCCCcceEEEEeCHHHHHHHHHHHh-hcccCCChHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHHH
Confidence            232 2    12   55554  46555554311 12235667777777777766     21 2335677888999999999


Q ss_pred             HHHHhCCCEEecCCCCCeEEEEEecCCC-----------cchHHHHHHH-hhcCceecc
Q psy10669        234 DEMIKRGYHVVTGGTDVHLILIDLRKNK-----------LTGSKVELVL-EEIAIACNK  280 (337)
Q Consensus       234 ~~L~~~G~~v~~~~t~~h~v~V~~~~~~-----------~~~~~~~~~L-~~~gI~v~~  280 (337)
                      +.|.+.|+++... ..+..+++++....           .+..++.+.| ++.||.+.+
T Consensus       330 ~~L~~~g~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~  387 (429)
T 1yiz_A          330 SFLAEVGMNPTVP-QGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIP  387 (429)
T ss_dssp             HHHHHHTCEEEEC-SBSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBC
T ss_pred             HHHHhCCCcccCC-CcceEEEEEcccccccccccccccCCCHHHHHHHHHHhCCEEEeC
Confidence            9999889988752 34567888886531           3456666666 478999875

>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}

Probab=99.09  E-value=2.2e-09  Score=106.67  Aligned_cols=217  Identities=11%  Similarity=0.048  Sum_probs=132.8

Q ss_pred             CccchHHHHHHHHHHHHHhhcCCCCCCC-------cceeecCCCchhHHHHHHhhC--------------------Cc--
Q psy10669         69 GGNQFIDEIEIVAQQRSLKAFNLDPEQW-------GCNVQPYSGSPANFAVCEKAL--------------------PT--  119 (337)
Q Consensus        69 ~G~~~~~~lE~~~~~~~a~lfg~~~~~~-------~~~v~~~Sgt~AN~~v~~aLl--------------------~~--  119 (337)
                      .......++|..+.+.++++||.+...+       |..+..++||.||+..+.+..                    ++  
T Consensus       111 ~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~  190 (481)
T 4e1o_A          111 ASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESSLNARLV  190 (481)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHTTEE
T ss_pred             CCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHHHhhhcCcccccccccCCeE
Confidence            3345567899888889999999875311       123556677999987666541                    11  


Q ss_pred             --------------------------------------ccc------c---ccEEEEcC--cccccccChHHHHHHhhhc
Q psy10669        120 --------------------------------------NNA------R---FDFLSSGT--TCYSRCLDYARFRQICDET  150 (337)
Q Consensus       120 --------------------------------------~~a------~---pklII~~~--S~~~~~~d~~~l~eia~~~  150 (337)
                                                            +.+      +   |.+|+++.  +..+..-|+++|.++|+++
T Consensus       191 v~~s~~~H~s~~~~~~~~g~~~~~v~~~~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~l~~I~~la~~~  270 (481)
T 4e1o_A          191 AYASDQAHSSVEKAGLISLVKMKFLPVDDNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCLSELGPICARE  270 (481)
T ss_dssp             EEEETTSCHHHHHHHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHH
T ss_pred             EEEcCcchHHHHHHHHhCCCceEEEEcCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCCHHHHHHHHHHc
Confidence                                                  000      1   56566652  3346778999999999999


Q ss_pred             CCeEEEeccccccccc---------e------eeeeccC------C-chh-hhh--H-HHHHh---hccCC---------
Q psy10669        151 DSIMFADMSHISGLIA---------G------VKGVTKT------G-EKI-LYD--Y-EEKIN---NAVFP---------  192 (337)
Q Consensus       151 ga~l~vD~AH~~Gli~---------g------~~~T~~~------G-g~i-~~~--l-~~~i~---~~~~p---------  192 (337)
                      |++++||+||+.|.+.         |      ++++.||      | |++ +.+  + .+.+.   ..++.         
T Consensus       271 ~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~  350 (481)
T 4e1o_A          271 GLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHFDCTGFWVKDKYKLQQTFSVNPIYLRHANSGVATDF  350 (481)
T ss_dssp             TCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESBHHHHHTTTCCCCGGGCCTTTTTSCCG
T ss_pred             CCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCCCCceEEEEEeCHHHHHHHhcCCchhccCcccCCCCCc
Confidence            9999999999987542         2      2222222      2 333 332  2 21111   00110         


Q ss_pred             ---CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCCCcchHHHH
Q psy10669        193 ---SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKNKLTGSKVE  268 (337)
Q Consensus       193 ---~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~~~~~~~~~  268 (337)
                         .++++-. ....++..++..+....++++.++..+++++|++.|.+. ||+++. ....+++.+.+...+....++.
T Consensus       351 ~~~~~~~~r~-~~~l~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~-~~~~~~v~f~~~~~~~~~~~l~  428 (481)
T 4e1o_A          351 MHWQIPLSRR-FRSVKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRNDPSFEIPA-KRHLGLVVFRLKGPNSLTENVL  428 (481)
T ss_dssp             GGGSSSSCCC-CTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEECCS-CCCSSEEEEEESSCHHHHHHHH
T ss_pred             ccccccCCCC-ccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec-CCceeEEEEEeCCchHHHHHHH
Confidence               0111211 133455555555545567889999999999999999985 999975 3467788887754333456677


Q ss_pred             HHHhhcC-ceeccCc-----ccchh
Q psy10669        269 LVLEEIA-IACNKNT-----GISLA  287 (337)
Q Consensus       269 ~~L~~~g-I~v~~~~-----girig  287 (337)
                      +.|.+.| +.+.+-.     -+|++
T Consensus       429 ~~L~~~g~~~~~~~~~~g~~~lR~~  453 (481)
T 4e1o_A          429 KEIAKAGRLFLIPATIQDKLIIRFT  453 (481)
T ss_dssp             HHHHHHCSSBCEEEEETTEEEEEEE
T ss_pred             HHHHhCCeEEEEeeEECCEEEEEEE
Confidence            7777666 3433211     57775

>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*

Probab=99.09  E-value=1.4e-08  Score=97.33  Aligned_cols=242  Identities=11%  Similarity=0.015  Sum_probs=144.3

Q ss_pred             ccceeeeccCCC--CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-c
Q psy10669         30 INGIELIASENF--TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-S  106 (337)
Q Consensus        30 ~~~i~l~asen~--~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t  106 (337)
                      .+.|+|-..++-  .+|.|.+++...+......+++...   |   ..+++....+.+.+.+|.+... ..+|.+++| +
T Consensus        23 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~---g---~~~l~~~la~~~~~~~~~~~~~-~~~i~~~~g~~   95 (410)
T 3e2y_A           23 PSVVNLGQGFPDISPPSYVKEELSKAAFIDNMNQYTRGF---G---HPALVKALSCLYGKIYQRQIDP-NEEILVAVGAY   95 (410)
T ss_dssp             TTSEECSSCCCCSCCCHHHHHHHHHHHTCGGGGSCCCTT---C---CHHHHHHHHHHHHHHHTSCCCT-TTSEEEESHHH
T ss_pred             CCeEEecCCCCCCCCCHHHHHHHHHHHhCccccCCCCCC---C---hHHHHHHHHHHHHHHhCCCCCC-CCCEEEeCCcH
Confidence            456777666654  4899999998765432112232211   1   2344433333444555533210 014667666 7


Q ss_pred             hhHHHHHHhhCCc------------------------------c---------------c-------c---cccEEEEcC
Q psy10669        107 PANFAVCEKALPT------------------------------N---------------N-------A---RFDFLSSGT  131 (337)
Q Consensus       107 ~AN~~v~~aLl~~------------------------------~---------------~-------a---~pklII~~~  131 (337)
                      .|+..++.+++++                              .               .       +   ++++|++..
T Consensus        96 ~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~  175 (410)
T 3e2y_A           96 GSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAIILNT  175 (410)
T ss_dssp             HHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCCTTEEEEEEES
T ss_pred             HHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEeccccccccccccccCCcCCHHHHHhhcCCCceEEEEeC
Confidence            8988888888654                              1               0       0   156777652


Q ss_pred             ccc--ccc---cChHHHHHHhhhcCCeEEEeccccccccc-----------------eeeeec-c----CC---chhhh-
Q psy10669        132 TCY--SRC---LDYARFRQICDETDSIMFADMSHISGLIA-----------------GVKGVT-K----TG---EKILY-  180 (337)
Q Consensus       132 S~~--~~~---~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----------------g~~~T~-~----~G---g~i~~-  180 (337)
                      -.+  +..   .++++|.++|+++|+++++|++|......                 .+..+. |    .|   |+++. 
T Consensus       176 p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~  255 (410)
T 3e2y_A          176 PHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWSIGP  255 (410)
T ss_dssp             SCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSSCGGGCCEEEECC
T ss_pred             CCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEecchhhcCCCCceEEEEEEC
Confidence            232  344   36778889999999999999999753221                 112222 2    12   55554 


Q ss_pred             -hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHH------HhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEE
Q psy10669        181 -DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQ------AQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLI  253 (337)
Q Consensus       181 -~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e------~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v  253 (337)
                       ++.+.+..... ....+++++..++++.++..      ......++.++++.++.++|.+.|.+.|+++... ..+..+
T Consensus       256 ~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~  333 (410)
T 3e2y_A          256 AHLIKHLQTVQQ-NSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLNSVGLKPIVP-DGGYFI  333 (410)
T ss_dssp             HHHHHHHHHHHH-TTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHTTTCEEEBC-SBSSEE
T ss_pred             HHHHHHHHHHHH-hhccCCChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHHHHCCCeecCC-CccEEE
Confidence             46565554322 22335667777777777653      1123457788899999999999999999987653 456677


Q ss_pred             EEEecCCC--cch---------HHHHHHHhhcCceecc
Q psy10669        254 LIDLRKNK--LTG---------SKVELVLEEIAIACNK  280 (337)
Q Consensus       254 ~V~~~~~~--~~~---------~~~~~~L~~~gI~v~~  280 (337)
                      ++++....  ++.         ..+...|+++||.+.+
T Consensus       334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~  371 (410)
T 3e2y_A          334 IADVSSLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIP  371 (410)
T ss_dssp             EEECGGGCCCCTTCCSSCCHHHHHHHHHHHHHSEECEE
T ss_pred             EEEchhhhcccccccccccCHHHHHHHHHHHcCEEEeC
Confidence            78876422  221         3444566778999876

>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*

Probab=99.09  E-value=6.2e-09  Score=98.68  Aligned_cols=197  Identities=10%  Similarity=0.039  Sum_probs=125.2

Q ss_pred             HHHHhhcC-CCCCCCcceeecCCC-chhHHHHHHhhCCc-----------------------------------------
Q psy10669         83 QRSLKAFN-LDPEQWGCNVQPYSG-SPANFAVCEKALPT-----------------------------------------  119 (337)
Q Consensus        83 ~~~a~lfg-~~~~~~~~~v~~~Sg-t~AN~~v~~aLl~~-----------------------------------------  119 (337)
                      +.++++++ .+.    .++.+++| +.|+..++.+++++                                         
T Consensus        70 ~~la~~~~~~~~----~~v~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~  145 (375)
T 3op7_A           70 KSVSQLYTGVKP----EQILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYDIPKSLGAEVDLWQIEEENGWLPDLE  145 (375)
T ss_dssp             HHHHTTSSSCCG----GGEEEESHHHHHHHHHHHHHCCTTCEEEEEESSCTHHHHHHHHTTCEEEEEEEEGGGTTEECHH
T ss_pred             HHHHHHhccCCh----hhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCCCCCCHH
Confidence            57778874 443    24555555 89999999999764                                         


Q ss_pred             --cc---ccccEEEEcCcc--cccccC---hHHHHHHhhhcCCeEEEeccccccccc------------eeeeec-c---
Q psy10669        120 --NN---ARFDFLSSGTTC--YSRCLD---YARFRQICDETDSIMFADMSHISGLIA------------GVKGVT-K---  173 (337)
Q Consensus       120 --~~---a~pklII~~~S~--~~~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~------------g~~~T~-~---  173 (337)
                        +.   .++++|++....  .+...|   +++|.++|+++|+++++|++|..+...            .+++|. |   
T Consensus       146 ~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~  225 (375)
T 3op7_A          146 KLRQLIRPTTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFSELDVPSIIEVYDKGIAVNSLSKTYS  225 (375)
T ss_dssp             HHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCSSSCCCCHHHHCTTEEEEEESSSSSS
T ss_pred             HHHHhhccCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccccccccCCCchhhhcCCEEEEeEChhhcC
Confidence              00   026787776322  357778   788889999999999999999863332            123332 2   


Q ss_pred             ----CCchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-CCCEEecC
Q psy10669        174 ----TGEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-RGYHVVTG  246 (337)
Q Consensus       174 ----~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~G~~v~~~  246 (337)
                          .+|+++.  ++.+.+.....+... ++++...++...++... +...+..++++.++.++|.+.|.+ .|+.+...
T Consensus       226 ~~G~r~G~v~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~  303 (375)
T 3op7_A          226 LPGIRIGWVAANHQVTDILRDYRDYTMI-CAGVFDDLVAQLALAHY-QEILERNRHILEENLAILDQWIEEEPLVSYIRP  303 (375)
T ss_dssp             CGGGCCEEEECCHHHHHHHTTTGGGTTS-CCCHHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHHHCTTEEECCC
T ss_pred             CcccceEEEEeCHHHHHHHHHHHhhhcc-CCCcHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHhhCCCceEecC
Confidence                1266655  577776654333333 34445555555555543 233466777889999999999998 47776642


Q ss_pred             CCCCeEEEEEecCCCcchHHHHHHH-hhcCceeccCc------ccchh
Q psy10669        247 GTDVHLILIDLRKNKLTGSKVELVL-EEIAIACNKNT------GISLA  287 (337)
Q Consensus       247 ~t~~h~v~V~~~~~~~~~~~~~~~L-~~~gI~v~~~~------girig  287 (337)
                       .....+++.+.. +.+..++...| ++.||.+.+..      .+||+
T Consensus       304 -~~~~~~~~~~~~-~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~  349 (375)
T 3op7_A          304 -AVVSTSFVKIAV-DMPMEDFCLQLLQEHGVLLVPGNRFERDGYVRLG  349 (375)
T ss_dssp             -SSSSCEEEEECC-SSCHHHHHHHHHHHHCEECEEGGGGTCTTEEEEC
T ss_pred             -CCeEEEeEEcCC-CCCHHHHHHHHHHhCCEEEeChhhhCCCCeEEEE
Confidence             334455666654 34666666665 67899987632      56765

>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3

Probab=99.09  E-value=3.4e-09  Score=98.89  Aligned_cols=185  Identities=14%  Similarity=0.061  Sum_probs=120.0

Q ss_pred             HHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc--------------------------------------cc--
Q psy10669         82 QQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT--------------------------------------NN--  121 (337)
Q Consensus        82 ~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~--------------------------------------~~--  121 (337)
                      ++++++++|.++     .+.++||+.|+..++.+++++                                      .+  
T Consensus         4 ~~~la~~~g~~~-----~i~~~sG~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~   78 (331)
T 1pff_A            4 EGKIAKLEHAEA-----CAATASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDMAVPGNIEK   78 (331)
T ss_dssp             HHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTSTTHHHH
T ss_pred             HHHHHHHhCCCe-----EEEeCChHHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCCCCHHHHHH
Confidence            467888998873     688889988888888887653                                      00  


Q ss_pred             c---cccEEEEcCcc--cccccChHHHHHHhhh-cCCeEEEeccccccccc--------eeeeec-c-----C---Cchh
Q psy10669        122 A---RFDFLSSGTTC--YSRCLDYARFRQICDE-TDSIMFADMSHISGLIA--------GVKGVT-K-----T---GEKI  178 (337)
Q Consensus       122 a---~pklII~~~S~--~~~~~d~~~l~eia~~-~ga~l~vD~AH~~Gli~--------g~~~T~-~-----~---Gg~i  178 (337)
                      +   ++++|++..-+  .+...|+++|.++|++ +|+++++|++|..|...        .++++. |     .   +|++
T Consensus        79 ~i~~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~~~~~r~~G~~  158 (331)
T 1pff_A           79 HLKPNTRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPILTNPLDLGVDIVVHSATKYINGHTDVVAGLV  158 (331)
T ss_dssp             TCCTTEEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTSSSSSCCCEEE
T ss_pred             hhcCCCeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCcccccCChhhcCCcEEEEECccccCCCCCceEEEE
Confidence            1   25777775322  3688899999999999 99999999999988643        133333 2     1   4566


Q ss_pred             hh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC---------------C
Q psy10669        179 LY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR---------------G  240 (337)
Q Consensus       179 ~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~---------------G  240 (337)
                      +.   ++.+.+.+...++..+++++...+++..++..     .+...++..+|++.+.+.|.+.               |
T Consensus       159 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~  233 (331)
T 1pff_A          159 CSRADIIAKVKSQGIKDITGAIISPHDAWLITRGTLT-----LDMRVKRAAENAQKVAEFLHEHKAVKKVYYPGLPDHPG  233 (331)
T ss_dssp             EECHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHCTTCCCEECTTSTTSTT
T ss_pred             EeCcHHHHHHHHHHHHhhcCCCCCHHHHHHHHcCcch-----HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCcc
Confidence            54   46667766544313345555544443344432     2445667778888888888763               2


Q ss_pred             CEEecC--CCCCeEEEEEecCCCcchHHHHHHHhhcCceecc
Q psy10669        241 YHVVTG--GTDVHLILIDLRKNKLTGSKVELVLEEIAIACNK  280 (337)
Q Consensus       241 ~~v~~~--~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~  280 (337)
                      +++...  ....+++.+.+.    +...+.+.|++.||.+..
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~gI~~~~  271 (331)
T 1pff_A          234 HEIAKKQMKMFGSMIAFDVD----GLEKAKKVLDNCHVVSLA  271 (331)
T ss_dssp             HHHHHHHCSSCCSEEEEECS----SHHHHHHHHHTCSSSEEC
T ss_pred             HHHHHhhCCCCceEEEEEEC----CHHHHHHHHHhCCCceec
Confidence            222210  123557777664    467788999999998764

>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*

Probab=99.09  E-value=1.2e-08  Score=95.56  Aligned_cols=232  Identities=11%  Similarity=0.088  Sum_probs=150.7

Q ss_pred             cceeeeccCCC--CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcC---CCCCCCcceeecCCC
Q psy10669         31 NGIELIASENF--TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFN---LDPEQWGCNVQPYSG  105 (337)
Q Consensus        31 ~~i~l~asen~--~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg---~~~~~~~~~v~~~Sg  105 (337)
                      ..|.|-..+|-  .+|.|.+++...+......+++.       ....+++    +.++++++   .+.    .+|.+++|
T Consensus        20 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-------~~~~~lr----~~la~~~~~~~~~~----~~v~~~~G   84 (335)
T 1uu1_A           20 DKTYLALNENPFPFPEDLVDEVFRRLNSDALRIYYD-------SPDEELI----EKILSYLDTDFLSK----NNVSVGNG   84 (335)
T ss_dssp             CSEEESSCCCSSCCCHHHHHHHHHTCCGGGGGSCCC-------SSCHHHH----HHHHHHHTCSSCCG----GGEEEESS
T ss_pred             cceECCCCCCCCCCCHHHHHHHHHHhhhhhhhcCCC-------CchHHHH----HHHHHHcCCCCCCH----HHEEEcCC
Confidence            45777777773  48999999987652211112211       1133444    57788998   654    36888888


Q ss_pred             -chhHHHHHHhhCC------c------------------------------ccccccEEEE-cCcc-cccccChHHHHHH
Q psy10669        106 -SPANFAVCEKALP------T------------------------------NNARFDFLSS-GTTC-YSRCLDYARFRQI  146 (337)
Q Consensus       106 -t~AN~~v~~aLl~------~------------------------------~~a~pklII~-~~S~-~~~~~d~~~l~ei  146 (337)
                       +.|+..++.++ +      +                              .+.++++|++ .+.+ .+...|.+++.+|
T Consensus        85 ~~~al~~~~~~~-gd~Vl~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~v~l~~p~nptG~~~~~~~l~~l  163 (335)
T 1uu1_A           85 ADEIIYVMMLMF-DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRIPEVNVGEGDVVFIPNPNNPTGHVFEREEIERI  163 (335)
T ss_dssp             HHHHHHHHHHHS-SEEEECSSSCHHHHHHHHHHTCEEEECCCCTTSCCCCCCCCTTEEEEEESSCTTTCCCCCHHHHHHH
T ss_pred             hHHHHHHHHHHh-CCcEEECCCcHHHHHHHHHcCCeEEEeccCCCCCCCHHHcCCCCEEEEeCCCCCCCCCCCHHHHHHH
Confidence             57776666665 2      2                              1112677774 4433 3588899999999


Q ss_pred             hhhcCCeEEEecccccc----ccc--------eeeeec-c----CC---chhhh--hHHHHHhhccCCCCCCCCcHHHHH
Q psy10669        147 CDETDSIMFADMSHISG----LIA--------GVKGVT-K----TG---EKILY--DYEEKINNAVFPSLQGGPHNHAIG  204 (337)
Q Consensus       147 a~~~ga~l~vD~AH~~G----li~--------g~~~T~-~----~G---g~i~~--~l~~~i~~~~~p~~~g~~~~~~ia  204 (337)
                      ++..| ++++|++|...    .+.        .+.+|. |    .|   |+++.  ++.+.+.....+   .+++++..+
T Consensus       164 ~~~~~-~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~---~~~~~~~~~  239 (335)
T 1uu1_A          164 LKTGA-FVALDEAYYEFHGESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASEKFIDAYNRVRLP---FNVSYVSQM  239 (335)
T ss_dssp             HHTTC-EEEEECTTHHHHCCCCGGGGGTCSSEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHHHSCT---TCSCHHHHH
T ss_pred             HHhCC-EEEEECcchhhcchhHHHHhhhCCCEEEEecchhhcCCcccCeEEEEeCHHHHHHHHHhcCC---CCcCHHHHH
Confidence            99889 99999999731    111        122333 2    12   56554  566666654433   267777777


Q ss_pred             HHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCc-c
Q psy10669        205 AIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT-G  283 (337)
Q Consensus       205 ala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~-g  283 (337)
                      ++..++...  ...++.++++.++.++|.+.|.+.|+++..  .....+++.+..  .+..++.+.|.+.||.+.+.. .
T Consensus       240 ~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~--~~~~~~~~~~~~--~~~~~~~~~l~~~gi~v~~~~~~  313 (335)
T 1uu1_A          240 FAKVALDHR--EIFEERTKFIVEERERMKSALREMGYRITD--SRGNFVFVFMEK--EEKERLLEHLRTKNVAVRSFREG  313 (335)
T ss_dssp             HHHHHHHTH--HHHHHHHHHHHHHHHHHHHHHHHHTCCBCC--CCSSEEEEECCT--HHHHHHHHHHHHHTEEEEEETTE
T ss_pred             HHHHHhCCH--HHHHHHHHHHHHHHHHHHHHHHHCCcEEcC--CCCeEEEEECCC--CCHHHHHHHHHHCCEEEEECCCe
Confidence            777666542  345678889999999999999988887754  344567777754  456777788888899998633 6


Q ss_pred             cchhh
Q psy10669        284 ISLAA  288 (337)
Q Consensus       284 irig~  288 (337)
                      +||+.
T Consensus       314 iRis~  318 (335)
T 1uu1_A          314 VRITI  318 (335)
T ss_dssp             EEEEC
T ss_pred             EEEEe
Confidence            88874

>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*

Probab=99.07  E-value=8.2e-09  Score=98.68  Aligned_cols=228  Identities=12%  Similarity=0.037  Sum_probs=140.3

Q ss_pred             CCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeec-CCCchhHHHHHHhhC--
Q psy10669         41 FTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQP-YSGSPANFAVCEKAL--  117 (337)
Q Consensus        41 ~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~-~Sgt~AN~~v~~aLl--  117 (337)
                      +.+|.|.+++...+. ++.  ..+ +.| ......+++    +++++++|.+.    -++.+ +||+.|+..++.++.  
T Consensus        61 ~~~~~v~~a~~~~~~-~~~--~~~-~~~-~~~~~~~l~----~~la~~~~~~~----~~v~~~~gg~~a~~~al~~~~~~  127 (395)
T 1vef_A           61 HGNPEVVEAVKRQAE-TLM--AMP-QTL-PTPMRGEFY----RTLTAILPPEL----NRVFPVNSGTEANEAALKFARAH  127 (395)
T ss_dssp             BTCHHHHHHHHHHHH-HCC--CCC-TTS-CCHHHHHHH----HHHHHTSCTTE----EEEEEESSHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHH-hCC--CCc-ccc-CCHHHHHHH----HHHHHhcCCCc----CEEEEcCcHHHHHHHHHHHHHHH
Confidence            358999999987654 332  222 223 222333444    68889997654    24555 455889887776652  


Q ss_pred             -Cc-----------------------c------------c-----------c-----cccEEEEcCccc--ccccC----
Q psy10669        118 -PT-----------------------N------------N-----------A-----RFDFLSSGTTCY--SRCLD----  139 (337)
Q Consensus       118 -~~-----------------------~------------~-----------a-----~pklII~~~S~~--~~~~d----  139 (337)
                       ++                       .            .           .     ++++|++.+...  +...|    
T Consensus       128 ~~~~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~~~~~  207 (395)
T 1vef_A          128 TGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPYNDVEALKRAVDEETAAVILEPVQGEGGVRPATPEF  207 (395)
T ss_dssp             HSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECTTCHHHHHHHCCTTEEEEEECSEETTTTSEECCHHH
T ss_pred             hCCCeEEEEcCCcCCCchhhhhhcCCcccccccCCCCCCeeEeCCCcHHHHHHHhccCEEEEEEeCccCCCCccCCCHHH
Confidence             21                       0            0           0     157888875432  45667    


Q ss_pred             hHHHHHHhhhcCCeEEEeccccccc--cc--------e----eeeecc------CCchhhh--hHHHHHhhccCCCCCCC
Q psy10669        140 YARFRQICDETDSIMFADMSHISGL--IA--------G----VKGVTK------TGEKILY--DYEEKINNAVFPSLQGG  197 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~~Gl--i~--------g----~~~T~~------~Gg~i~~--~l~~~i~~~~~p~~~g~  197 (337)
                      +++|.++|+++|++|++|++|. |+  .+        +    +.+.+|      ..|+++.  ++.+.+....+.. ..+
T Consensus       208 l~~i~~l~~~~~~~li~Dea~~-~~~~~g~~~~~~~~~~~~d~~s~sK~~~~g~~~G~~~~~~~~~~~l~~~~~~~-~~~  285 (395)
T 1vef_A          208 LRAAREITQEKGALLILDEIQT-GMGRTGKRFAFEHFGIVPDILTLAKALGGGVPLGVAVMREEVARSMPKGGHGT-TFG  285 (395)
T ss_dssp             HHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSTHHHHTCCCSEEEECGGGGTTSSCEEEEEEHHHHHTSCTTSSCC-SST
T ss_pred             HHHHHHHHHHcCCEEEEEeccc-CCccCCchhHhhhcCCCCCEEEEcccccCCCceEEEEehHHHHhhhccCCcCC-CcC
Confidence            8999999999999999999999 43  11        1    122222      1244433  4555554421111 224


Q ss_pred             CcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEec-CCCCCeEEEEEecCCCcchHHHHHHHh-hcC
Q psy10669        198 PHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVT-GGTDVHLILIDLRKNKLTGSKVELVLE-EIA  275 (337)
Q Consensus       198 ~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~-~~t~~h~v~V~~~~~~~~~~~~~~~L~-~~g  275 (337)
                      +++...++...++..+.+   .++.+++.++.++|.+.|.+.+.++.. .....+++++++..   +..++.+.|. +.|
T Consensus       286 ~~~~~~~a~~~al~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~g~~~~~~~~~---~~~~l~~~l~~~~g  359 (395)
T 1vef_A          286 GNPLAMAAGVAAIRYLER---TRLWERAAELGPWFMEKLRAIPSPKIREVRGMGLMVGLELKE---KAAPYIARLEKEHR  359 (395)
T ss_dssp             TCHHHHHHHHHHHHHHHH---HTTHHHHHHHHHHHHHHHHTSCCTTEEEEEEETTEEEEEESS---CSHHHHHHHHHHHC
T ss_pred             CCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHhhcCceEEEEEEEEEEEEEEcC---hHHHHHHHHHHHCC
Confidence            566777777777766532   457888999999999999987653221 11244677888764   2566777777 789


Q ss_pred             ceeccCc--ccchhhh
Q psy10669        276 IACNKNT--GISLAAE  289 (337)
Q Consensus       276 I~v~~~~--girig~~  289 (337)
                      |.+.+..  .+||+..
T Consensus       360 i~v~~~~~~~iRi~~~  375 (395)
T 1vef_A          360 VLALQAGPTVIRFLPP  375 (395)
T ss_dssp             EECEESSTTEEEECCC
T ss_pred             eEEecCCCCEEEEeCC
Confidence            9998642  6888643

>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1

Probab=99.06  E-value=4.6e-09  Score=98.30  Aligned_cols=222  Identities=13%  Similarity=0.066  Sum_probs=133.2

Q ss_pred             CCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCC-CchhHHHHHHhhCCc
Q psy10669         41 FTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYS-GSPANFAVCEKALPT  119 (337)
Q Consensus        41 ~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~S-gt~AN~~v~~aLl~~  119 (337)
                      ..+|.|++++...+. .|..+.       |.   .++...+++.+++++|.+.    .++.+++ |+.|+..++.+++++
T Consensus        25 ~~~~~v~~a~~~~~~-~~~~~~-------g~---~~~~~~~~~~l~~~~g~~~----~~v~~~~g~t~a~~~~~~~~~~~   89 (359)
T 1svv_A           25 GMHPKILDLMARDNM-TQHAGY-------GQ---DSHCAKAARLIGELLERPD----ADVHFISGGTQTNLIACSLALRP   89 (359)
T ss_dssp             CCCHHHHHHHHHHTT-CCCCST-------TC---SHHHHHHHHHHHHHHTCTT----SEEEEESCHHHHHHHHHHHHCCT
T ss_pred             CCCHHHHHHHHHHHh-hccccc-------cc---cHHHHHHHHHHHHHhCCCC----ccEEEeCCchHHHHHHHHHHhCC
Confidence            458999999987643 342211       22   2333344568889999775    2566655 488998888988654


Q ss_pred             ------------------------------------------cc---cc-------ccEEEEcCcc-cccccC---hHHH
Q psy10669        120 ------------------------------------------NN---AR-------FDFLSSGTTC-YSRCLD---YARF  143 (337)
Q Consensus       120 ------------------------------------------~~---a~-------pklII~~~S~-~~~~~d---~~~l  143 (337)
                                                                +.   .+       +++|++...+ .+...|   +++|
T Consensus        90 gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~~ptG~~~~~~~l~~i  169 (359)
T 1svv_A           90 WEAVIATQLGHISTHETGAIEATGHKVVTAPCPDGKLRVADIESALHENRSEHMVIPKLVYISNTTEVGTQYTKQELEDI  169 (359)
T ss_dssp             TEEEEEETTSHHHHSSTTHHHHTTCCEEEECCTTSCCCHHHHHHHHHHSCSTTSCEEEEEEEESSCTTSCCCCHHHHHHH
T ss_pred             CCEEEEcccchHHHHHHHHHhcCCCeeEEEeCCCCeecHHHHHHHHHHHHhccCCCceEEEEEcCCCCceecCHHHHHHH
Confidence                                                      00   01       5677775432 356666   7788


Q ss_pred             HHHhhhcCCeEEEeccc---cccccc-------------eeeeeccC-C-----chhhh--hHHHHHhhcc--CCCCCCC
Q psy10669        144 RQICDETDSIMFADMSH---ISGLIA-------------GVKGVTKT-G-----EKILY--DYEEKINNAV--FPSLQGG  197 (337)
Q Consensus       144 ~eia~~~ga~l~vD~AH---~~Gli~-------------g~~~T~~~-G-----g~i~~--~l~~~i~~~~--~p~~~g~  197 (337)
                      .++|+++|+++++|++|   ..|.++             .++++++| |     |+++.  ++.+.+.+..  .+.+.+ 
T Consensus       170 ~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~g~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~-  248 (359)
T 1svv_A          170 SASCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKAGGMFGEALIILNDALKPNARHLIKQRGALMA-  248 (359)
T ss_dssp             HHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCSEEEEECTTTTCSSCEEEEECSGGGCTTHHHHHHHTTCCCT-
T ss_pred             HHHHHHhCCEEEEEccchhhhhcCCCcchhhhhhhhcCCEEEEecccCCCCCceEEEEEcccHHHHHHHHHhcCCcccc-
Confidence            89999999999999999   555543             12333333 2     33332  3433333221  122222 


Q ss_pred             CcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhc-Cc
Q psy10669        198 PHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEI-AI  276 (337)
Q Consensus       198 ~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~-gI  276 (337)
                      ...+..++++..   +.+..+++.++++.++.++|.+.|...|+++... ...+.+++++.      .++.+.|.+. ||
T Consensus       249 ~~~~~~~~~~~~---l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~------~~~~~~l~~~~gi  318 (359)
T 1svv_A          249 KGWLLGIQFEVL---MKDNLFFELGAHSNKMAAILKAGLEACGIRLAWP-SASNQLFPILE------NTMIAELNNDFDM  318 (359)
T ss_dssp             TTHHHHHHHHHH---TSTTHHHHHHHHHHHHHHHHHHHHHHTTCCBSSC-CSSSEECBEEE------HHHHHHHTTTEEC
T ss_pred             cchhhHHHHHHH---HhhhhHHHHHHHHHHHHHHHHHHhccCCeEEccC-CccceEEEEcC------HHHHHHHHHhcCE
Confidence            122333333222   2223457888999999999999996689888742 44566666553      3556666665 99


Q ss_pred             eeccC-----cccchhh
Q psy10669        277 ACNKN-----TGISLAA  288 (337)
Q Consensus       277 ~v~~~-----~girig~  288 (337)
                      .+...     ..|||+.
T Consensus       319 ~v~~~~~~~~~~iRi~~  335 (359)
T 1svv_A          319 YTVEPLKDGTCIMRLCT  335 (359)
T ss_dssp             EEEEEETTTEEEEEEEC
T ss_pred             EEEecccCCCceEEEEc
Confidence            98431     1678863

>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*

Probab=99.06  E-value=1e-08  Score=97.00  Aligned_cols=222  Identities=13%  Similarity=0.071  Sum_probs=141.4

Q ss_pred             cceeeeccCCC--CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-ch
Q psy10669         31 NGIELIASENF--TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SP  107 (337)
Q Consensus        31 ~~i~l~asen~--~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~  107 (337)
                      ..|.|...+|-  .+|.|.+++...+...  .+++.       ....+++    +.+++++|.+.    .+|.+++| +.
T Consensus        25 ~~idl~~~~~~~~~~~~v~~a~~~~~~~~--~~y~~-------~~~~~l~----~~la~~~~~~~----~~v~~~~g~~~   87 (364)
T 1lc5_A           25 QLLDFSANINPLGMPVSVKRALIDNLDCI--ERYPD-------ADYFHLH----QALARHHQVPA----SWILAGNGETE   87 (364)
T ss_dssp             GSEECSSCCCTTCCCHHHHHHHHHTGGGG--GSCCC-------TTCHHHH----HHHHHHHTSCG----GGEEEESSHHH
T ss_pred             ceEEeccccCCCCCCHHHHHHHHHHHHHh--hcCCC-------CCHHHHH----HHHHHHHCcCH----HHEEECCCHHH
Confidence            45777666654  4899999998765321  12221       1123444    57788999875    25778777 67


Q ss_pred             hHHHHHHhhCCc------------------------------c------cc--------cccEEEE-cCcc-cccccC--
Q psy10669        108 ANFAVCEKALPT------------------------------N------NA--------RFDFLSS-GTTC-YSRCLD--  139 (337)
Q Consensus       108 AN~~v~~aLl~~------------------------------~------~a--------~pklII~-~~S~-~~~~~d--  139 (337)
                      |+..++.++ ++                              .      +.        ++++|++ .+.+ .+...|  
T Consensus        88 al~~~~~~~-~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~l~~~~~~~~~~~~~v~i~~p~nptG~~~~~~  166 (364)
T 1lc5_A           88 SIFTVASGL-KPRRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQLTDAILEALTPDLDCLFLCTPNNPTGLLPERP  166 (364)
T ss_dssp             HHHHHHHHH-CCSEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCTTHHHHCCTTCCEEEEESSCTTTCCCCCHH
T ss_pred             HHHHHHHHc-CCCeEEEeCCCcHHHHHHHHHcCCeEEEEeCCcccccchhHHHHHhccCCCCEEEEeCCCCCCCCCCCHH
Confidence            877777777 32                              1      11        2576665 3432 356677  


Q ss_pred             -hHHHHHHhhhcCCeEEEeccccccccc--------------eeeeec-c----CC---chhh-h--hHHHHHhhccCCC
Q psy10669        140 -YARFRQICDETDSIMFADMSHISGLIA--------------GVKGVT-K----TG---EKIL-Y--DYEEKINNAVFPS  193 (337)
Q Consensus       140 -~~~l~eia~~~ga~l~vD~AH~~Gli~--------------g~~~T~-~----~G---g~i~-~--~l~~~i~~~~~p~  193 (337)
                       +++|.++|+++|+++++|++|..+...              .+.++. |    .|   |+++ .  ++.+.+.....+ 
T Consensus       167 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~-  245 (364)
T 1lc5_A          167 LLQAIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMARMRRQQMP-  245 (364)
T ss_dssp             HHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCCHHHHHHHHHHSCT-
T ss_pred             HHHHHHHHhhhcCcEEEEECcChhhccCccchhhHhccCCCEEEEEECchhhcCCccceEEEEECCHHHHHHHHHhCCC-
Confidence             777889999999999999999854321              122332 2    13   6666 4  566666654333 


Q ss_pred             CCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCCCcchHHHHHHHh
Q psy10669        194 LQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKNKLTGSKVELVLE  272 (337)
Q Consensus       194 ~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~  272 (337)
                        .++++...+++..++..  ....++.++++.++.++|.+.|.+. |+++..  .....+++.+..   +..++.+.|.
T Consensus       246 --~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~~g~~~~~~~~~---~~~~l~~~l~  316 (364)
T 1lc5_A          246 --WSVNALAALAGEVALQD--SAWQQATWHWLREEGARFYQALCQLPLLTVYP--GRANYLLLRCER---EDIDLQRRLL  316 (364)
T ss_dssp             --TCSCHHHHHHHHHGGGC--HHHHHHHHHHHHHHHHHHHHHHHTSTTEEECC--CSSSEEEEEESC---TTCCHHHHHH
T ss_pred             --CCCCHHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHhcCCCCEECC--CCCeEEEEECCC---cHHHHHHHHH
Confidence              25666666666555533  1234677788889999999999886 888764  445566777753   2345667777


Q ss_pred             hcCceecc
Q psy10669        273 EIAIACNK  280 (337)
Q Consensus       273 ~~gI~v~~  280 (337)
                      +.||.+.+
T Consensus       317 ~~gi~v~~  324 (364)
T 1lc5_A          317 TQRILIRS  324 (364)
T ss_dssp             TTTEECEE
T ss_pred             HCCcEEee
Confidence            77999875

>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0

Probab=99.05  E-value=8.6e-09  Score=97.61  Aligned_cols=226  Identities=13%  Similarity=0.046  Sum_probs=139.8

Q ss_pred             cceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCC--CCCCCcceeecCCC-
Q psy10669         31 NGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNL--DPEQWGCNVQPYSG-  105 (337)
Q Consensus        31 ~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~--~~~~~~~~v~~~Sg-  105 (337)
                      ..|.|...+|..  +|.|.+++...+...  .+++..   .|   ..++.....+.+.+.+|.  +.    .+|.+++| 
T Consensus        24 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~--~~y~~~---~g---~~~lr~~la~~l~~~~g~~~~~----~~i~~t~g~   91 (376)
T 3ezs_A           24 RGLDLGIGEPQFETPKFIQDALKNHTHSL--NIYPKS---AF---EESLRAAQRGFFKRRFKIELKE----NELISTLGS   91 (376)
T ss_dssp             CCCBCSSCCCCSCCCHHHHHHHHTTGGGG--GSCCCT---TC---CHHHHHHHHHHHHHHHSCCCCG----GGEEEESSS
T ss_pred             CEEEeCCCCCCCCCCHHHHHHHHHhhhhc--CCCCCC---CC---CHHHHHHHHHHHHHHhCCCCCH----HHEEECcCc
Confidence            567777777655  799999998765211  122211   12   234443333456666786  33    25666666 


Q ss_pred             chhHHHHHHhhCCc----------------------------------c------cc-----cccEEEEcCccc--cccc
Q psy10669        106 SPANFAVCEKALPT----------------------------------N------NA-----RFDFLSSGTTCY--SRCL  138 (337)
Q Consensus       106 t~AN~~v~~aLl~~----------------------------------~------~a-----~pklII~~~S~~--~~~~  138 (337)
                      ++|+..++.+++++                                  .      +.     ++++|++..-.+  +...
T Consensus        92 ~~al~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~p~nptG~~~  171 (376)
T 3ezs_A           92 REVLFNFPSFVLFDYQNPTIAYPNPFYQIYEGAAKFIKAKSLLMPLTKENDFTPSLNEKELQEVDLVILNSPNNPTGRTL  171 (376)
T ss_dssp             HHHHHHHHHHHTTTCSSCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTSCCCCCHHHHHHCSEEEECSSCTTTCCCC
T ss_pred             HHHHHHHHHHHcCCCCCCEEEEecCCcHhHHHHHHHcCCEEEEcccCCCCCcchhHHhhhccCCCEEEEcCCCCCcCCCC
Confidence            68888777887531                                  1      11     168888752232  4555


Q ss_pred             Ch---HHHHHHhhhcCCeEEEeccccccccc---------------------eeeeec-c----CC---chhhh--hHHH
Q psy10669        139 DY---ARFRQICDETDSIMFADMSHISGLIA---------------------GVKGVT-K----TG---EKILY--DYEE  184 (337)
Q Consensus       139 d~---~~l~eia~~~ga~l~vD~AH~~Gli~---------------------g~~~T~-~----~G---g~i~~--~l~~  184 (337)
                      |.   ++|.++|+++|++|++|++|......                     .+.+|. |    .|   |+++.  ++.+
T Consensus       172 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~  251 (376)
T 3ezs_A          172 SLEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAGDSRLLE  251 (376)
T ss_dssp             CHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGGGCCEEEEECHHHHH
T ss_pred             CHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccccccccCcEEEEecchhccCCccceeEEEeeCHHHHH
Confidence            64   45566799999999999999864332                     112232 2    12   55554  5666


Q ss_pred             HHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcch
Q psy10669        185 KINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTG  264 (337)
Q Consensus       185 ~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~  264 (337)
                      .+..... ....+++++..+++..++..  ....++.++++.++.+++.+.|.  |+. .  ...+..+++++.    +.
T Consensus       252 ~~~~~~~-~~~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~--~~~-~--~~~~~~~~~~~~----~~  319 (376)
T 3ezs_A          252 KYKAFRA-YLGYTSANAIQKASEAAWLD--DRHAEFFRNIYANNLKLARKIFK--NTL-I--YPYSFYVYLPVQ----NG  319 (376)
T ss_dssp             HHHHHHT-TTCCCCCHHHHHHHHHHHHC--SHHHHHHHHHHHHHHHHHHHHST--TCC-C--CSBSSEEEEECS----CH
T ss_pred             HHHHHHh-hhcCCCChHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHhc--CCC-C--CCcceEEEEECC----CH
Confidence            6665432 22345677777777776654  23457788888889998988887  665 2  245667778775    46


Q ss_pred             HHHHHHHhh-cCceecc
Q psy10669        265 SKVELVLEE-IAIACNK  280 (337)
Q Consensus       265 ~~~~~~L~~-~gI~v~~  280 (337)
                      .++.+.|.+ .||.+.+
T Consensus       320 ~~~~~~l~~~~gi~v~~  336 (376)
T 3ezs_A          320 ENFAKTLYQNEGIITLP  336 (376)
T ss_dssp             HHHHHHHHHHHCCBCEE
T ss_pred             HHHHHHHHHhCCEEEeC
Confidence            677777776 8999875

>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*

Probab=99.04  E-value=1.1e-08  Score=99.82  Aligned_cols=208  Identities=11%  Similarity=0.045  Sum_probs=128.0

Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHhh-CCc--------------------------------c
Q psy10669         75 DEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEKA-LPT--------------------------------N  120 (337)
Q Consensus        75 ~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~aL-l~~--------------------------------~  120 (337)
                      .+++...++.+++++|.+.    .++.+++| +.++.+++.++ +++                                .
T Consensus       107 ~~~~~~~~~~la~~~g~~~----~~i~~~~g~taa~ea~~~a~~~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~  182 (438)
T 1wyu_A          107 LQATFEYQTMIAELAGLEI----ANASMYDGATALAEGVLLALRETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLP  182 (438)
T ss_dssp             HHHHHHHHHHHHHHHTSSE----ECSCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred             HHHHHHHHHHHHHHhCCCc----cceEEeCcHHHHHHHHHHHHhcCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEEEc
Confidence            4555566789999999986    45666666 53444444443 111                                0


Q ss_pred             ----------cc-cccEEEEcCc-ccccccChHHHHHHhhhcCCeEEEecc-ccccccc--------eeeeecc------
Q psy10669        121 ----------NA-RFDFLSSGTT-CYSRCLDYARFRQICDETDSIMFADMS-HISGLIA--------GVKGVTK------  173 (337)
Q Consensus       121 ----------~a-~pklII~~~S-~~~~~~d~~~l~eia~~~ga~l~vD~A-H~~Gli~--------g~~~T~~------  173 (337)
                                +. ++++|++... ..+...|+++|.++|+++|+++++|.. |..|.+.        .+++++|      
T Consensus       183 ~~~~~~d~~~i~~~t~~v~i~~pn~tG~~~~l~~i~~la~~~g~~vivd~d~~a~g~~~~~~~~g~D~~~~s~kk~~~~~  262 (438)
T 1wyu_A          183 LEGGRTPLPEVGEEVGAVVVQNPNFLGALEDLGPFAEAAHGAGALFVAVADPLSLGVLKPPGAYGADIAVGDGQSLGLPM  262 (438)
T ss_dssp             CBTTBCCCCCCCTTEEEEEEESSCTTSBCCCHHHHHHHHHHTTCEEEEECCTTGGGTBCCHHHHTCSEEEEECTTTTCCC
T ss_pred             CcCCccCHHHhCCCeEEEEEECCCCCeEEecHHHHHHHHHHcCCEEEEEechhhccCcCCCccCCCCEEEECCcccCCCc
Confidence                      11 2567777643 346778999999999999999998865 7777754        1233233      


Q ss_pred             -----CCchhhh--hHHHHHhhcc------CC-----------------CCCCCCcH---HHHHHHHHH--HHHHhchhh
Q psy10669        174 -----TGEKILY--DYEEKINNAV------FP-----------------SLQGGPHN---HAIGAIATA--MLQAQSDEF  218 (337)
Q Consensus       174 -----~Gg~i~~--~l~~~i~~~~------~p-----------------~~~g~~~~---~~iaala~a--~~e~~~~~~  218 (337)
                           .+|+++.  ++.+.+....      .+                 ...++++.   +.++++.++  +..+....+
T Consensus       263 ~~~Gp~~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~~~~g~  342 (438)
T 1wyu_A          263 GFGGPHFGFLATKKAFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGPEGL  342 (438)
T ss_dssp             GGGCSCCEEEEECGGGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCeeEEEEcHHHHHhCCCceeccccccCCCcceeeeccccccccchhcccCCccchHHHHHHHHHHHHHHhCHHHH
Confidence                 2355554  3433321100      00                 01244444   556666555  555443456


Q ss_pred             HHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCcee--cc-----Ccccchhhh
Q psy10669        219 KSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIAC--NK-----NTGISLAAE  289 (337)
Q Consensus       219 ~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v--~~-----~~girig~~  289 (337)
                      ++.++++.+++++|.+.|.+. |+++......-+.+.+.+.   .+..++.+.|.+.||.+  ..     ...|||+..
T Consensus       343 ~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~L~~~gi~v~~~~~~~~~~~~lRis~~  418 (438)
T 1wyu_A          343 REVALKSVEMAHKLHALLLEVPGVRPFTPKPFFNEFALALP---KDPEAVRRALAERGFHGATPVPREYGENLALFAAT  418 (438)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTSTTCEECSCSSBCSEEEEECS---SCHHHHHHHHHHTTCCCCEECCTTSCSSEEEEECC
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCeEECCCCCeEEEEEEeCC---CCHHHHHHHHHHCCceeccccccccCCCeEEEEec
Confidence            788999999999999999996 9999763222233344332   36788888888889998  22     126888754

>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*

Probab=99.04  E-value=5.5e-08  Score=92.90  Aligned_cols=246  Identities=16%  Similarity=0.079  Sum_probs=145.2

Q ss_pred             ccceeeeccCCC--CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCC-CCCcceeecCCC-
Q psy10669         30 INGIELIASENF--TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDP-EQWGCNVQPYSG-  105 (337)
Q Consensus        30 ~~~i~l~asen~--~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~-~~~~~~v~~~Sg-  105 (337)
                      ...|.|-..++-  .+|.|.+++...+.... .+|+..   .|   ..++.....+.+.+.+|.+- +   -+|.+++| 
T Consensus        31 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~~~---~g---~~~lr~~ia~~~~~~~g~~~~~---~~i~~t~g~  100 (385)
T 1b5p_A           31 VDLVALTAGEPDFDTPEHVKEAARRALAQGK-TKYAPP---AG---IPELREALAEKFRRENGLSVTP---EETIVTVGG  100 (385)
T ss_dssp             CCCEECCCSSCSSCCCHHHHHHHHHHHHTTC-CSCCCT---TC---CHHHHHHHHHHHHHTTCCCCCG---GGEEEESHH
T ss_pred             CCEEEecCCCCCCCCCHHHHHHHHHHHhcCC-CCCCCC---CC---CHHHHHHHHHHHHHHhCCCCCh---HHEEEcCCh
Confidence            455677666663  37899999876653311 122111   12   23444333344555556431 1   24677666 


Q ss_pred             chhHHHHHHhhCCc-------------------------------c------------cc---cccEEEEc-Ccc-cccc
Q psy10669        106 SPANFAVCEKALPT-------------------------------N------------NA---RFDFLSSG-TTC-YSRC  137 (337)
Q Consensus       106 t~AN~~v~~aLl~~-------------------------------~------------~a---~pklII~~-~S~-~~~~  137 (337)
                      ++|+..++.+++++                               .            .+   ++|+|++. +++ .+..
T Consensus       101 ~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~NPtG~~  180 (385)
T 1b5p_A          101 SQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAV  180 (385)
T ss_dssp             HHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHTTCCTTEEEEEEESSCTTTCCC
T ss_pred             HHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCcccCCCCCHHHHHHhcCCCCEEEEEeCCCCCCCCC
Confidence            78888888888754                               0            01   15666664 322 2454


Q ss_pred             cC---hHHHHHHhhhcCCeEEEeccccccccc--------------eeeeec-c-------CCchhhh--hHHHHHhhcc
Q psy10669        138 LD---YARFRQICDETDSIMFADMSHISGLIA--------------GVKGVT-K-------TGEKILY--DYEEKINNAV  190 (337)
Q Consensus       138 ~d---~~~l~eia~~~ga~l~vD~AH~~Gli~--------------g~~~T~-~-------~Gg~i~~--~l~~~i~~~~  190 (337)
                      .+   +++|.++|+++|+++++|++|.-....              .+.+|. |       +.|+++.  ++.+.+.+..
T Consensus       181 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~~~~~~~~~~~l~~~~  260 (385)
T 1b5p_A          181 YPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKEVIKAMASVS  260 (385)
T ss_dssp             CCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCTTTEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHH
T ss_pred             cCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCHHHcCCCCEEEEEechhhcCCcccceEEEEeCHHHHHHHHHHH
Confidence            44   777888999999999999998754331              122333 2       1255554  4666555432


Q ss_pred             CCCCCCCCcHHHHHHHHHHHHH---HhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHH
Q psy10669        191 FPSLQGGPHNHAIGAIATAMLQ---AQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKV  267 (337)
Q Consensus       191 ~p~~~g~~~~~~iaala~a~~e---~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~  267 (337)
                      .++.. +++.....+...++..   . ....++.++++.++.+++.+.|.+.|+++... ..+..+++++...+.+..++
T Consensus       261 ~~~~~-~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~l  337 (385)
T 1b5p_A          261 RQSTT-SPDTIAQWATLEALTNQEAS-RAFVEMAREAYRRRRDLLLEGLTALGLKAVRP-SGAFYVLMDTSPIAPDEVRA  337 (385)
T ss_dssp             HTTTC-SCCHHHHHHHHHHHHCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHTCCBCCC-SBTTEEEEECTTTCSSHHHH
T ss_pred             hhccC-CCCHHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHHHHHHHHHHCCCeecCC-CeeEEEEEecCCCCCCHHHH
Confidence            23222 4445555555555533   2 23346678888889999999998888887642 22334566775445677888


Q ss_pred             HHHHhhcCceeccCc------ccchhh
Q psy10669        268 ELVLEEIAIACNKNT------GISLAA  288 (337)
Q Consensus       268 ~~~L~~~gI~v~~~~------girig~  288 (337)
                      .+.|.+.||.+.+-.      .+||+.
T Consensus       338 ~~~l~~~gv~v~~g~~f~~~~~iRis~  364 (385)
T 1b5p_A          338 AERLLEAGVAVVPGTDFAAFGHVRLSY  364 (385)
T ss_dssp             HHHHHHTTEECEESGGGTCTTEEEEEC
T ss_pred             HHHHHHCCeEEecccccCCCCeEEEEe
Confidence            888888899987632      467763

>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}

Probab=99.03  E-value=1.1e-08  Score=96.85  Aligned_cols=222  Identities=14%  Similarity=0.107  Sum_probs=135.8

Q ss_pred             CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCC-CchhHHHHHHh---hC
Q psy10669         42 TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYS-GSPANFAVCEK---AL  117 (337)
Q Consensus        42 ~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~S-gt~AN~~v~~a---Ll  117 (337)
                      .+|.+.+++...+. ++  +.++++| . .....++    ++.+++++|.+.     ++.+++ |+.|+..++.+   +.
T Consensus        45 ~~~~v~~a~~~~~~-~~--~~~~~~y-~-~~~~~~l----~~~la~~~g~~~-----~v~~~~g~t~a~~~~~~~~~~~~  110 (375)
T 2eh6_A           45 AYPKLTEALKEQVE-KL--LHVSNLY-E-NPWQEEL----AHKLVKHFWTEG-----KVFFANSGTESVEAAIKLARKYW  110 (375)
T ss_dssp             SCHHHHHHHHHHHH-HC--SCCCTTB-C-CHHHHHH----HHHHHHTSSSCE-----EEEEESSHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHH-hc--cccCccc-C-CHHHHHH----HHHHHhhcCCCC-----eEEEeCchHHHHHHHHHHHHHHh
Confidence            68999999987654 33  3334443 1 2223334    468889999831     455544 58888776653   23


Q ss_pred             -----C-c---------------------c-------------c-------------c---cccEEEEcCccc--ccccC
Q psy10669        118 -----P-T---------------------N-------------N-------------A---RFDFLSSGTTCY--SRCLD  139 (337)
Q Consensus       118 -----~-~---------------------~-------------~-------------a---~pklII~~~S~~--~~~~d  139 (337)
                           + +                     .             .             +   ++++|++.+..+  +...|
T Consensus       111 ~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~  190 (375)
T 2eh6_A          111 RDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAKLNDIDSVYKLLDEETAGIIIEVIQGEGGVNEA  190 (375)
T ss_dssp             HHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEECTTCHHHHHTTCCTTEEEEEECSEETTTTSEEC
T ss_pred             ccCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeCCCchHHHHHHHhcCCeEEEEEeCccCCCCCcCC
Confidence                 2 2                     0             0             0   157888865333  45557


Q ss_pred             ----hHHHHHHhhhcCCeEEEecccc-ccccc--------e-----eeeecc------CCchhhh--hHHHHHhhccCCC
Q psy10669        140 ----YARFRQICDETDSIMFADMSHI-SGLIA--------G-----VKGVTK------TGEKILY--DYEEKINNAVFPS  193 (337)
Q Consensus       140 ----~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g-----~~~T~~------~Gg~i~~--~l~~~i~~~~~p~  193 (337)
                          +++|.++|+++|+++++|++|. .|..+        +     ++++ |      ..|+++.  ++.+.+.+..+..
T Consensus       191 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~d~~s~S-K~~~~g~~~G~~~~~~~~~~~~~~~~~~~  269 (375)
T 2eh6_A          191 SEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFYAYQHFNLKPDVIALA-KGLGGGVPIGAILAREEVAQSFTPGSHGS  269 (375)
T ss_dssp             CHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEEC-GGGGTTSCCEEEEEEHHHHTTCCTTSCCC
T ss_pred             CHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcchhhhhcCCCCCEEEEc-ccccCCCCeEEEEEcHHHHhhhcCCCCCC
Confidence                8899999999999999999999 44322        1     2222 2      1244433  4555554422222


Q ss_pred             CCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhh
Q psy10669        194 LQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEE  273 (337)
Q Consensus       194 ~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~  273 (337)
                      .+++ ++...++...++..+ .    ++.+++.++.++|.+.|.+.+.....  ....++++++..   +..++.+.|.+
T Consensus       270 ~~~~-~~~~~~~~~~~l~~~-~----~~~~~~~~~~~~l~~~L~~~~~~~~~--~~g~~~~~~~~~---~~~~~~~~l~~  338 (375)
T 2eh6_A          270 TFGG-NPLACRAGTVVVDEV-E----KLLPHVREVGNYFKEKLKELGKGKVK--GRGLMLGLELER---ECKDYVLKALE  338 (375)
T ss_dssp             SSTT-CHHHHHHHHHHHHHH-H----HHHHHHHHHHHHHHHHHHHTTSSEEE--EETTEEEEECSS---CCHHHHHHHHH
T ss_pred             CCCC-CHHHHHHHHHHHHHH-H----HHHHHHHHHHHHHHHHHHHHhcCCce--EEEEEEEEEEcC---cHHHHHHHHHH
Confidence            3444 344444444444443 1    67889999999999999987754433  345677888754   35667778878


Q ss_pred             cCceeccC--cccchhhh
Q psy10669        274 IAIACNKN--TGISLAAE  289 (337)
Q Consensus       274 ~gI~v~~~--~girig~~  289 (337)
                      .||.+.+.  ..+||+..
T Consensus       339 ~gi~~~~~~~~~iRi~~~  356 (375)
T 2eh6_A          339 KGLLINCTAGKVLRFLPP  356 (375)
T ss_dssp             TTEECEEETTTEEEECCC
T ss_pred             CCCEEecCCCCEEEEECC
Confidence            89998853  26888754

>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}

Probab=99.02  E-value=2e-08  Score=95.97  Aligned_cols=239  Identities=9%  Similarity=-0.003  Sum_probs=137.1

Q ss_pred             cceeeeccCCC--CCHHHHHHHhhhhhhcc---CCCCCCCcCcCccchHHHHHHHHHHHHHhhcCC--CCCCCcceeecC
Q psy10669         31 NGIELIASENF--TSLAVLECLGSCLQNKY---SEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNL--DPEQWGCNVQPY  103 (337)
Q Consensus        31 ~~i~l~asen~--~~p~V~~a~~~~l~~~y---~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~--~~~~~~~~v~~~  103 (337)
                      +.|.|...+..  .+|.|.+++...+....   ..+++.   ..|.   .++.....+.+.+.+|.  +.    .+|.++
T Consensus        36 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~y~~---~~g~---~~lr~~la~~l~~~~g~~~~~----~~i~~~  105 (398)
T 3ele_A           36 NVYDFSIGNPSIPAPQIVNDTIKELVTDYDSVALHGYTS---AQGD---VETRAAIAEFLNNTHGTHFNA----DNLYMT  105 (398)
T ss_dssp             GCEECCSCCCCSCCCHHHHHHHHHHHHHSCHHHHHSCCC---TTCC---HHHHHHHHHHHHHHHCCCCCG----GGEEEE
T ss_pred             CeEEeecCCCCCCCCHHHHHHHHHHHhcCCccccCCcCC---CCCc---HHHHHHHHHHHHHHhCCCCCh----HHEEEc
Confidence            45666654432  37899999987654310   112211   1222   33443333466666774  33    257777


Q ss_pred             CC-chhHHHHHHhhCCc-------------------------------------------c--cc-cccEEEEcCccc--
Q psy10669        104 SG-SPANFAVCEKALPT-------------------------------------------N--NA-RFDFLSSGTTCY--  134 (337)
Q Consensus       104 Sg-t~AN~~v~~aLl~~-------------------------------------------~--~a-~pklII~~~S~~--  134 (337)
                      +| ++|+..++.+++++                                           +  +. ++++|++..-.+  
T Consensus       106 ~g~~~al~~~~~~l~~~g~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~npt  185 (398)
T 3ele_A          106 MGAAASLSICFRALTSDAYDEFITIAPYFPEYKVFVNAAGARLVEVPADTEHFQIDFDALEERINAHTRGVIINSPNNPS  185 (398)
T ss_dssp             SSHHHHHHHHHHHHCCSTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCTTTSSCCHHHHHHTCCTTEEEEEECSSCTTT
T ss_pred             cCHHHHHHHHHHHHcCCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhCcCCCEEEEcCCCCCC
Confidence            77 78988888888642                                           0  00 267777742232  


Q ss_pred             ccccC---hHHHHHHhhh------cCCeEEEeccccccccc--------------eeeeec-c----CC---chhhh--h
Q psy10669        135 SRCLD---YARFRQICDE------TDSIMFADMSHISGLIA--------------GVKGVT-K----TG---EKILY--D  181 (337)
Q Consensus       135 ~~~~d---~~~l~eia~~------~ga~l~vD~AH~~Gli~--------------g~~~T~-~----~G---g~i~~--~  181 (337)
                      +...|   +++|.++|++      +|+++++|++|......              .+++|. |    .|   |+++.  +
T Consensus       186 G~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~  265 (398)
T 3ele_A          186 GTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYYDNTLVCYSYSKSLSLPGERIGYVLVPDE  265 (398)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGGGTCSSEEEEEESTTTSSCTTTCCEEEECCTT
T ss_pred             CCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCChHhhcCCeEEEEehhhcCCCccceeEEEEEcch
Confidence            46666   4455588888      89999999999863322              123333 2    12   55543  2


Q ss_pred             ------HHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEE
Q psy10669        182 ------YEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILI  255 (337)
Q Consensus       182 ------l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V  255 (337)
                            +.+.+..........+++....++++..+.   .   ...++++.++.++|.+.|.+.|+++... ..+..+++
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~---~---~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~  338 (398)
T 3ele_A          266 VYDKAELYAAVCGAGRALGYVCAPSLFQKMIVKCQG---A---TGDINAYKENRDLLYEGLTRIGYHCFKP-DGAFYMFV  338 (398)
T ss_dssp             STTHHHHHHHHHHHHHHTTCCCSCHHHHHHHTTCTT---C---CCCHHHHHHHHHHHHHHHHHHTCCEECC-SBSSEEEE
T ss_pred             hhhHHHHHHHHHHHhhhccccCCCHHHHHHHHHHhc---C---HHHHHHHHHHHHHHHHHHHHcCCeecCC-CeeEEEEE
Confidence                  222222111111122344444444333221   1   1246788889999999999989988753 23444677


Q ss_pred             EecCCCcchHHHHHHHhhcCceeccCc------ccchhh
Q psy10669        256 DLRKNKLTGSKVELVLEEIAIACNKNT------GISLAA  288 (337)
Q Consensus       256 ~~~~~~~~~~~~~~~L~~~gI~v~~~~------girig~  288 (337)
                      .+..  .+..++.+.|.+.||.+.+..      .+||+.
T Consensus       339 ~~~~--~~~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~  375 (398)
T 3ele_A          339 KALE--DDSNAFCEKAKEEDVLIVAADGFGCPGWVRISY  375 (398)
T ss_dssp             ECSS--SCHHHHHHHHHTTTEECEESGGGTCTTEEEEEC
T ss_pred             EcCC--CCHHHHHHHHHHCCEEEeCccccCCCCeEEEEe
Confidence            7653  267788888988999997633      577764

>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}

Probab=98.99  E-value=2.1e-08  Score=97.15  Aligned_cols=191  Identities=16%  Similarity=0.117  Sum_probs=121.1

Q ss_pred             chHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc--------------------------------
Q psy10669         72 QFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT--------------------------------  119 (337)
Q Consensus        72 ~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~--------------------------------  119 (337)
                      ...+++|    +++++++|.+.     .+.+.||+.||..++.+++++                                
T Consensus        56 ~~~~~l~----~~la~~~g~~~-----~~~~~~gt~a~~~al~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~  126 (412)
T 2cb1_A           56 PTAKALE----ERLKALEGALE-----AVVLASGQAATFAALLALLRPGDEVVAAKGLFGQTIGLFGQVLSLMGVTVRYV  126 (412)
T ss_dssp             HHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHHTTCCTTCEEEEETTCCHHHHHHHHHTTTTTTCEEEEE
T ss_pred             hHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEE
Confidence            4445665    57889999874     566777899999888988654                                


Q ss_pred             -------ccc---cccEEEEcCcc--cccccChHHHHHHhhhcCCeEEEecccccc-ccc--------eeeeec-c----
Q psy10669        120 -------NNA---RFDFLSSGTTC--YSRCLDYARFRQICDETDSIMFADMSHISG-LIA--------GVKGVT-K----  173 (337)
Q Consensus       120 -------~~a---~pklII~~~S~--~~~~~d~~~l~eia~~~ga~l~vD~AH~~G-li~--------g~~~T~-~----  173 (337)
                             +.+   ++++|++...+  .+...|+++|.++|+++|+++++|++|..| ...        .++++. |    
T Consensus       127 ~~~~~~l~~~i~~~~~~v~~~~~~n~~G~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~~~~di~~~S~~K~~~~  206 (412)
T 2cb1_A          127 DPEPEAVREALSAKTRAVFVETVANPALLVPDLEALATLAEEAGVALVVDNTFGAAGALCRPLAWGAHVVVESLTKWASG  206 (412)
T ss_dssp             CSSHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGTTTTSCCGGGGTCSEEEEETTTTTTC
T ss_pred             CCCHHHHHHHhccCCeEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCCccccccCCccccCCeEEEECCcccccC
Confidence                   000   25788875322  357889999999999999999999999988 322        123332 2    


Q ss_pred             ----CCchhhhh-----------------------------HHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHH
Q psy10669        174 ----TGEKILYD-----------------------------YEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKS  220 (337)
Q Consensus       174 ----~Gg~i~~~-----------------------------l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~  220 (337)
                          .||+++.+                             +.+.++.... ...|....+..++++.  ..+  ..+.+
T Consensus       207 ~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~-~~~g~~~~~~~a~~~~--~~l--~~l~~  281 (412)
T 2cb1_A          207 HGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWEALRARCFPERVRTLGL-SLCGMALSPFNAYLLF--QGL--ETVAL  281 (412)
T ss_dssp             SSCCCCEEEEECCCSGGGGSGGGGCC-------HHHHGGGHHHHHHHHHHT-TTTCCCCCHHHHHHHH--HHG--GGHHH
T ss_pred             CCCcEEEEEEeccccccccccccccccccccchhhccchHHHHHHHHHHHH-HhcCCCCChHHhHHHH--cCC--chHHH
Confidence                14444321                             2233332221 1122222233332222  122  23456


Q ss_pred             HHHHHHHHHHHHHHHHHh-CCCEEec-CCC---------------CCeEEEEEecCCCcchHHHHHHHhhcCceeccC
Q psy10669        221 YQAQVKANASHLSDEMIK-RGYHVVT-GGT---------------DVHLILIDLRKNKLTGSKVELVLEEIAIACNKN  281 (337)
Q Consensus       221 y~~~v~~na~~l~~~L~~-~G~~v~~-~~t---------------~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~  281 (337)
                      +.++..+++++|++.|.+ .|+.++. .+.               ...++.+.+   + +...+.+.|++.||.+ ..
T Consensus       282 ~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~~~~~~~~~~~~~~iv~~~~---~-~~~~~~~~l~~~~i~~-~~  354 (412)
T 2cb1_A          282 RVARMSETARFLAERLQGHPKVKALRYPGLPEDPAHRNARKYLASGGPILTLDL---G-DLERASRFLGAIRLLK-AA  354 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTTHHHHHHHCSSSCSEEEEEC---S-SHHHHHHHHHHCSSEE-CS
T ss_pred             HHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEe---C-CHHHHHHHHHhCCeee-ec
Confidence            777888999999999998 4887552 222               344777776   3 6788889999999998 54

>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1

Probab=98.99  E-value=4.8e-09  Score=101.76  Aligned_cols=238  Identities=9%  Similarity=-0.005  Sum_probs=139.2

Q ss_pred             ccceeeeccC-CC---CCHHHHHHHhhhhhhcc--CCCCCCCcCcCccchHHHHHHHHHHHHHhhcCC---CCCCCccee
Q psy10669         30 INGIELIASE-NF---TSLAVLECLGSCLQNKY--SEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNL---DPEQWGCNV  100 (337)
Q Consensus        30 ~~~i~l~ase-n~---~~p~V~~a~~~~l~~~y--~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~---~~~~~~~~v  100 (337)
                      ...|.|.... ++   .+|.+.+++...+....  ..+++.      .....+++....+.+.+.||.   +.    .+|
T Consensus        43 ~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~------~~g~~~lr~~la~~l~~~~g~~~~~~----~~v  112 (425)
T 1vp4_A           43 KDAISFGGGVPDPETFPRKELAEIAKEIIEKEYHYTLQYST------TEGDPVLKQQILKLLERMYGITGLDE----DNL  112 (425)
T ss_dssp             TTCEECCCCSCCGGGSCHHHHHHHHHHHHHHSHHHHTSCCC------TTCCHHHHHHHHHHHHHHHCCCSCCG----GGE
T ss_pred             CCceeCCCCCCCcccCCHHHHHHHHHHHHhhcchhhcCCCC------CCCCHHHHHHHHHHHHhccCCCCCCc----ccE
Confidence            3456664433 21   46789999887654310  012211      111234543333344444484   33    257


Q ss_pred             ecCCC-chhHHHHHHhhCCc--------------------------------------cc-----c--------cccEEE
Q psy10669        101 QPYSG-SPANFAVCEKALPT--------------------------------------NN-----A--------RFDFLS  128 (337)
Q Consensus       101 ~~~Sg-t~AN~~v~~aLl~~--------------------------------------~~-----a--------~pklII  128 (337)
                      .+++| +.|+..++.+++++                                      .+     .        ++++|+
T Consensus       113 ~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~v~  192 (425)
T 1vp4_A          113 IFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAINAFRQYLANFVVVPLEDDGMDLNVLERKLSEFDKNGKIKQVKFIY  192 (425)
T ss_dssp             EEEEHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETTEECHHHHHHHHHHHHHTTCGGGEEEEE
T ss_pred             EEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEEeccCCCCCCHHHHHHHHHhhhhcccCCCceEEE
Confidence            78777 67888888888654                                      00     1        356763


Q ss_pred             -Ec-Ccc-cccccC---hHHHHHHhhhcCCeEEEeccccccccc----------------eeeeeccC----C---chhh
Q psy10669        129 -SG-TTC-YSRCLD---YARFRQICDETDSIMFADMSHISGLIA----------------GVKGVTKT----G---EKIL  179 (337)
Q Consensus       129 -~~-~S~-~~~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~----------------g~~~T~~~----G---g~i~  179 (337)
                       +. ..+ .+...+   +++|.++|+++|+++++|++|..+...                .+.+|..|    |   |+++
T Consensus       193 ~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~  272 (425)
T 1vp4_A          193 VVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSKVLAPGLRIGMVA  272 (425)
T ss_dssp             EECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTEEEEEESTTTTCGGGCEEEEE
T ss_pred             ECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHHhCCCCCEEEEeccccccccccceEEEe
Confidence             43 222 234554   456778999999999999999875432                11333322    3   5555


Q ss_pred             h--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHH-hchhhHHHHHHHHHHHHHHHHHHHhC-----CCEEecCCCCCe
Q psy10669        180 Y--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQA-QSDEFKSYQAQVKANASHLSDEMIKR-----GYHVVTGGTDVH  251 (337)
Q Consensus       180 ~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~-~~~~~~~y~~~v~~na~~l~~~L~~~-----G~~v~~~~t~~h  251 (337)
                      .  ++.+.+.....+... ++++...+++..++... .....++.++++.++.++|.+.|.+.     |+++... ..+.
T Consensus       273 ~~~~~~~~l~~~~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~-~~g~  350 (425)
T 1vp4_A          273 GSKEFIRKIVQAKQSADL-CSPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALEEYFSDIPGVKWVKS-EGGL  350 (425)
T ss_dssp             CCHHHHHHHHHHHHHHHS-SCCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHHHHSTTSTTCEECCC-SBSS
T ss_pred             eCHHHHHHHHHHhhhhcC-CCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecC-CccE
Confidence            4  465555433222222 34666666666666543 12234677788889999999999874     7887642 3466


Q ss_pred             EEEEEecCCCcchHHHHHHHhhcCceecc
Q psy10669        252 LILIDLRKNKLTGSKVELVLEEIAIACNK  280 (337)
Q Consensus       252 ~v~V~~~~~~~~~~~~~~~L~~~gI~v~~  280 (337)
                      .+++.+.. +.+..++.+.|.+.||.+.+
T Consensus       351 ~~~~~~~~-~~~~~~l~~~l~~~gi~v~~  378 (425)
T 1vp4_A          351 FIWLTLPE-GFDTWEMFEYAKRKKVFYVP  378 (425)
T ss_dssp             EEEEECCT-TCCTTTTHHHHHHHTEECEE
T ss_pred             EEEEEcCC-CCCHHHHHHHHHHCCCEEEC
Confidence            78888864 34566667777766999875

>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*

Probab=98.99  E-value=8.7e-09  Score=98.69  Aligned_cols=234  Identities=12%  Similarity=-0.003  Sum_probs=139.9

Q ss_pred             ccceeeeccC-CC---CCHHHHHHHhhhhhhcc--CCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecC
Q psy10669         30 INGIELIASE-NF---TSLAVLECLGSCLQNKY--SEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPY  103 (337)
Q Consensus        30 ~~~i~l~ase-n~---~~p~V~~a~~~~l~~~y--~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~  103 (337)
                      ...|.|-... ++   .+|.+.+++...+....  ..+++.      .....+++    +.+++++|.+.    .+|.++
T Consensus        32 ~~~i~l~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~------~~~~~~l~----~~la~~~g~~~----~~v~~~   97 (397)
T 2zyj_A           32 PGILSFAGGLPAPELFPKEEAAEAAARILREKGEVALQYSP------TEGYAPLR----AFVAEWIGVRP----EEVLIT   97 (397)
T ss_dssp             TTCEEESSCCCCGGGCCHHHHHHHHHHHHHHHHHHHTSCCC------TTCCHHHH----HHHHHHHTSCG----GGEEEE
T ss_pred             CCceecCCCCCCchhCCHHHHHHHHHHHHHhcchhhhCCCC------CCCCHHHH----HHHHHHhCCCh----hhEEEe
Confidence            3456664332 22   36789998876654310  012211      11123444    57788888764    257787


Q ss_pred             CC-chhHHHHHHhhCCc--------------------------------------cc-----c-cccEEE-Ec-Ccc-cc
Q psy10669        104 SG-SPANFAVCEKALPT--------------------------------------NN-----A-RFDFLS-SG-TTC-YS  135 (337)
Q Consensus       104 Sg-t~AN~~v~~aLl~~--------------------------------------~~-----a-~pklII-~~-~S~-~~  135 (337)
                      +| +.|+..++.+++++                                      .+     . ++++|+ +. ..+ .+
T Consensus        98 ~g~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~~nptG  177 (397)
T 2zyj_A           98 TGSQQALDLVGKVFLDEGSPVLLEAPSYMGAIQAFRLQGPRFLTVPAGEEGPDLDALEEVLKRERPRFLYLIPSFQNPTG  177 (397)
T ss_dssp             SHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETTEECHHHHHHHHHHCCCSCEEECCBSCTTTC
T ss_pred             ccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEecCcCCCCCCHHHHHHHHhhcCCeEEEECCCCcCCCC
Confidence            77 57888788888654                                      00     0 367764 33 222 24


Q ss_pred             cccChH---HHHHHhhhcCCeEEEeccccccccc----------e---------eeeeccC----C---chhhh--hHHH
Q psy10669        136 RCLDYA---RFRQICDETDSIMFADMSHISGLIA----------G---------VKGVTKT----G---EKILY--DYEE  184 (337)
Q Consensus       136 ~~~d~~---~l~eia~~~ga~l~vD~AH~~Gli~----------g---------~~~T~~~----G---g~i~~--~l~~  184 (337)
                      ...|.+   +|.++|+++|+++++|++|..+...          +         +++|.+|    |   |+++.  ++.+
T Consensus       178 ~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~~~~~  257 (397)
T 2zyj_A          178 GLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSKVLSPGLRVAFAVAHPEALQ  257 (397)
T ss_dssp             CBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCCCEEEEEESTTTTCGGGCCEEEECCHHHHH
T ss_pred             CcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCcccCCCeEEEEecccccccccceeEEEecCHHHHH
Confidence            556655   6778999999999999999874431          0         1233322    2   55554  4655


Q ss_pred             HHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC---CCEEecCCCCCeEEEEEecCCC
Q psy10669        185 KINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR---GYHVVTGGTDVHLILIDLRKNK  261 (337)
Q Consensus       185 ~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~---G~~v~~~~t~~h~v~V~~~~~~  261 (337)
                      .+.....+...++ ++...+++..++........++.++++.++.++|.+.|.+.   |+++... ..+..+++++.. +
T Consensus       258 ~l~~~~~~~~~~~-~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~~-~~g~~~~~~~~~-~  334 (397)
T 2zyj_A          258 KLVQAKQGADLHT-PMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHALDREVPKEVRYTRP-KGGMFVWMELPK-G  334 (397)
T ss_dssp             HHHHHHHHHHSSC-CHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTSEECCC-SBSSEEEEECST-T
T ss_pred             HHHHHHHhhcCCC-CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEccC-CccEEEEEEcCC-C
Confidence            5554322222333 45555555554433100234567788889999999999874   7887642 345677788754 4


Q ss_pred             cchHHHHHHHhhcCceecc
Q psy10669        262 LTGSKVELVLEEIAIACNK  280 (337)
Q Consensus       262 ~~~~~~~~~L~~~gI~v~~  280 (337)
                      .+..++.+.|.+.||.+.+
T Consensus       335 ~~~~~~~~~l~~~gi~v~~  353 (397)
T 2zyj_A          335 LSAEGLFRRALEENVAFVP  353 (397)
T ss_dssp             CCHHHHHHHHHHTTEEEEE
T ss_pred             CCHHHHHHHHHHCCCEEec
Confidence            5677888888888999875

>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*

Probab=98.98  E-value=8.1e-08  Score=93.04  Aligned_cols=157  Identities=16%  Similarity=0.096  Sum_probs=101.6

Q ss_pred             cEEEEcCc-cc--ccccC----hHHHHHHhhhcCCeEEEecccc-ccccc--------e-----eeeeccC--C-----c
Q psy10669        125 DFLSSGTT-CY--SRCLD----YARFRQICDETDSIMFADMSHI-SGLIA--------G-----VKGVTKT--G-----E  176 (337)
Q Consensus       125 klII~~~S-~~--~~~~d----~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g-----~~~T~~~--G-----g  176 (337)
                      ++|++.+. ..  +...+    +++|.++|+++|++|++|++|+ .|-.+        +     ++++ |.  |     |
T Consensus       206 ~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~~~~~~~~~~~d~~t~s-K~l~~G~~~iG  284 (429)
T 1s0a_A          206 AAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAEIAPDILCLG-KALTGGTMTLS  284 (429)
T ss_dssp             EEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEEC-GGGGTSSSCCE
T ss_pred             EEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchHHHhhhcCCCCCEEEec-ccccCCCccce
Confidence            47777654 22  34455    8889999999999999999997 44222        1     1111 21  2     4


Q ss_pred             hhhh--hHHHHHhhc-----cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC----CCEEec
Q psy10669        177 KILY--DYEEKINNA-----VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR----GYHVVT  245 (337)
Q Consensus       177 ~i~~--~l~~~i~~~-----~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~----G~~v~~  245 (337)
                      +++.  ++.+.+...     ...+ .-++++..+++..+++..+.+   +++.+++.++.++|.+.|.+.    ++..+.
T Consensus       285 ~~~~~~~~~~~l~~~~~~~~~~~~-t~~~n~~~~~a~~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~  360 (429)
T 1s0a_A          285 ATLTTREVAETISNGEAGCFMHGP-TFMGNPLACAAANASLAILES---GDWQQQVADIEVQLREQLAPARDAEMVADVR  360 (429)
T ss_dssp             EEEECHHHHHHHHTSTTSSCSCCC-TTTTCHHHHHHHHHHHHHHHT---CHHHHHHHHHHHHHHHHHGGGGGCTTEEEEE
T ss_pred             EEEeCHHHHHHhhcCCCcccccCC-CCCCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence            4443  566666542     1112 224577888888888877643   257788899999999999873    443232


Q ss_pred             CCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCc-ccchhhh
Q psy10669        246 GGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT-GISLAAE  289 (337)
Q Consensus       246 ~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~-girig~~  289 (337)
                        +...++++++.. ..+..++.+.|.+.||.+.+.. .|||..+
T Consensus       361 --~~g~~~~~~~~~-~~~~~~l~~~l~~~Gi~v~~~~~~iRis~~  402 (429)
T 1s0a_A          361 --VLGAIGVVETTH-PVNMAALQKFFVEQGVWIRPFGKLIYLMPP  402 (429)
T ss_dssp             --EETTEEEEEESS-CBCHHHHHHHHHHTTEECCCBTTEEEECCC
T ss_pred             --EeeEEEEEEECC-cccHHHHHHHHHHCCCEEeccCCEEEEECC
Confidence              234467788764 2467778888888899998643 6787644

>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*

Probab=98.97  E-value=3.4e-08  Score=95.94  Aligned_cols=228  Identities=14%  Similarity=0.078  Sum_probs=134.3

Q ss_pred             CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhC-----
Q psy10669         43 SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL-----  117 (337)
Q Consensus        43 ~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl-----  117 (337)
                      +|.|.+++...+. ++.  ..++ .| ......+++    +++++++|.+.     .+..+||+.||..++.++.     
T Consensus        75 ~p~v~~ai~~~~~-~~~--~~~~-~~-~~~~~~~l~----~~la~~~g~~~-----v~~~~ggteA~~~al~~~~~~~~~  140 (420)
T 2pb2_A           75 HPALVEALKSQGE-TLW--HTSN-VF-TNEPALRLG----RKLIDATFAER-----VLFMNSGTEANETAFKLARHYACV  140 (420)
T ss_dssp             CHHHHHHHHHHHT-TCC--CCCT-TS-CCHHHHHHH----HHHHHHSSCSE-----EEEESSHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHH-hcc--cccC-cc-CCHHHHHHH----HHHHhhCCCCe-----EEEeCCHHHHHHHHHHHHHHHhhh
Confidence            8999999987643 332  2222 22 223334444    57788888642     3444566899888877763     


Q ss_pred             ----Cc-----------------------c------------c-----------c-----cccEEEEcCccc--cc----
Q psy10669        118 ----PT-----------------------N------------N-----------A-----RFDFLSSGTTCY--SR----  136 (337)
Q Consensus       118 ----~~-----------------------~------------~-----------a-----~pklII~~~S~~--~~----  136 (337)
                          ++                       .            .           .     ++++|++.+...  +.    
T Consensus       141 ~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~d~~~le~~i~~~~~~vi~~p~~~~gG~~~~~  220 (420)
T 2pb2_A          141 RHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPFNDLHAVKAVMDDHTCAVVVEPIQGEGGVQAAT  220 (420)
T ss_dssp             HTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECTTCHHHHHHHCCTTEEEEEECSEETTTTSEECC
T ss_pred             ccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecCCCHHHHHHHhccCceEEEEeCCcCCCCeecCC
Confidence                21                       0            0           0     157888864322  11    


Q ss_pred             ccChHHHHHHhhhcCCeEEEecccccccc--c--------e----eeeeccC--C----chhh-h-hHHHHHhhccCCCC
Q psy10669        137 CLDYARFRQICDETDSIMFADMSHISGLI--A--------G----VKGVTKT--G----EKIL-Y-DYEEKINNAVFPSL  194 (337)
Q Consensus       137 ~~d~~~l~eia~~~ga~l~vD~AH~~Gli--~--------g----~~~T~~~--G----g~i~-~-~l~~~i~~~~~p~~  194 (337)
                      ..++++|+++|+++|++|++|++|. |+.  +        +    +.+..|.  |    |+++ . ++.+.+........
T Consensus       221 ~~~l~~l~~l~~~~gi~lI~Dev~~-g~~~~g~~~~~~~~~~~~diit~sK~l~~G~~iG~~~~~~~l~~~l~~~~~~~t  299 (420)
T 2pb2_A          221 PEFLKGLRDLCDEHQALLVFDEVQC-GMGRTGDLFAYMHYGVTPDILTSAKALGGGFPVSAMLTTQEIASAFHVGSHGST  299 (420)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSHHHHHTCCCSEEEECGGGGTTSCCEEEEECHHHHTTCC----CCE
T ss_pred             HHHHHHHHHHHHHcCCEEEEEcCCc-CcccCCcHHHHHhcCCCCCeEEecccccCCCceEEEEEhHHHHHhhcCCCcCcc
Confidence            3567889999999999999999994 542  1        1    1111121  1    3333 2 44443333211122


Q ss_pred             CCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCEEec-CCCCCeEEEEEecCC-CcchHHHHHH
Q psy10669        195 QGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYHVVT-GGTDVHLILIDLRKN-KLTGSKVELV  270 (337)
Q Consensus       195 ~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~v~~-~~t~~h~v~V~~~~~-~~~~~~~~~~  270 (337)
                      + +.++...++...++..+.+   +++.+++.++.++|.+.|.+.  ++.++. ......++.+++... +.+..++.+.
T Consensus       300 ~-~~~~~~~aa~~a~L~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~l~~~  375 (420)
T 2pb2_A          300 Y-GGNPLACAVAGAAFDIINT---PEVLQGIHTKRQQFVQHLQAIDEQFDIFSDIRGMGLLIGAELKPKYKGRARDFLYA  375 (420)
T ss_dssp             E-CCCHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEETTEEEEEECGGGTTCHHHHHHH
T ss_pred             c-CcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecceEEEEEECCCchHHHHHHHHH
Confidence            2 4566666666666766532   577889999999999999774  333221 012456777877542 1246778888


Q ss_pred             HhhcCceeccCc--ccchhhh
Q psy10669        271 LEEIAIACNKNT--GISLAAE  289 (337)
Q Consensus       271 L~~~gI~v~~~~--girig~~  289 (337)
                      |.+.||.+.+..  .+||..+
T Consensus       376 l~~~Gi~v~~~~~~~iRl~~~  396 (420)
T 2pb2_A          376 GAEAGVMVLNAGADVMRFAPS  396 (420)
T ss_dssp             HHHTTEECEESSTTEEEECCC
T ss_pred             HHHCCCEEEeCCCCEEEEECC
Confidence            888899998642  5888754

>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}

Probab=98.96  E-value=7e-08  Score=91.95  Aligned_cols=234  Identities=12%  Similarity=0.043  Sum_probs=142.2

Q ss_pred             ccceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCC--CCCCcceeecCCC
Q psy10669         30 INGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLD--PEQWGCNVQPYSG  105 (337)
Q Consensus        30 ~~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~--~~~~~~~v~~~Sg  105 (337)
                      +..|.|...++..  +|.|++++...+...  .+|+..   .|.   .++.....+.+.+.+|.+  .+++  +|.+++|
T Consensus        30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~--~~y~~~---~g~---~~lr~~la~~l~~~~g~~~~~~~~--~i~~t~g   99 (396)
T 3jtx_A           30 MEAVPLHIGEPKHPTPKVITDALTASLHEL--EKYPLT---AGL---PELRQACANWLKRRYDGLTVDADN--EILPVLG   99 (396)
T ss_dssp             CCCEECSCCSCCSCCCHHHHHHHHHTGGGG--GSCCCT---TCC---HHHHHHHHHHHHHHTTTCCCCTTT--SEEEESS
T ss_pred             CCeEEeCCcCCCCCCCHHHHHHHHHHhhhc--cCCCCC---CCc---HHHHHHHHHHHHHhcCCCCCCCCC--eEEEcCC
Confidence            4567777666655  799999998765321  223221   122   344433345666777853  1211  5777777


Q ss_pred             -chhHHHHHHhhCC-------c--------------------------------------ccc-----cccEEEEc-Ccc
Q psy10669        106 -SPANFAVCEKALP-------T--------------------------------------NNA-----RFDFLSSG-TTC  133 (337)
Q Consensus       106 -t~AN~~v~~aLl~-------~--------------------------------------~~a-----~pklII~~-~S~  133 (337)
                       ++|+..++.++++       +                                      .+.     ++++|++. +.+
T Consensus       100 ~~~al~~~~~~~~~~g~~~~~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~g~~~d~~~l~~~~~~~~~~v~l~~p~n  179 (396)
T 3jtx_A          100 SREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEGATLLGGGEIHFANCPAPSFNPDWRSISEEVWKRTKLVFVCSPNN  179 (396)
T ss_dssp             HHHHHHHHHHHHCCC---CCCCEEEEEESCCHHHHHHHHHTTCEEEEEECCTTTCCCCGGGSCHHHHHTEEEEEEESSCT
T ss_pred             cHHHHHHHHHHHhCCCCccCCCEEEEcCCCcHhHHHHHHHcCCEEEEeecCCCCCccCHHHHHHhhccCcEEEEEECCCC
Confidence             6788777777741       2                                      111     26777764 322


Q ss_pred             -cccccChHH---HHHHhhhcCCeEEEeccccccccc---------------------eeeeec-cC----C---chhhh
Q psy10669        134 -YSRCLDYAR---FRQICDETDSIMFADMSHISGLIA---------------------GVKGVT-KT----G---EKILY  180 (337)
Q Consensus       134 -~~~~~d~~~---l~eia~~~ga~l~vD~AH~~Gli~---------------------g~~~T~-~~----G---g~i~~  180 (337)
                       .+...+.++   |.++|+++|+++++|++|......                     .+..|. |.    |   |+++.
T Consensus       180 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~  259 (396)
T 3jtx_A          180 PSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAG  259 (396)
T ss_dssp             TTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTSSCGGGCCEEEEE
T ss_pred             CCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccCcEEEEeccccccCCcccceEEEEe
Confidence             245666555   778899999999999999852221                     112233 31    2   55544


Q ss_pred             --hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEec
Q psy10669        181 --DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLR  258 (337)
Q Consensus       181 --~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~  258 (337)
                        ++.+.+..... ....+++++..+++..++..  ....++.++++.++.+++.+.|.+. +.+.. ...+..+++++.
T Consensus       260 ~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~-~~~~~~~~~~~~  334 (396)
T 3jtx_A          260 DAELLKNFLLYRT-YHGSAMSIPVQRASIAAWDD--EQHVIDNRRLYQEKFERVIPILQQV-FDVKL-PDASFYIWLKVP  334 (396)
T ss_dssp             CHHHHHHHHHHHH-HHTCCCCHHHHHHHHHHHHC--CHHHHHHHHHHHHHHHHHHHHHTTT-SCCCC-CSSSSEEEEECT
T ss_pred             CHHHHHHHHHHHh-hcccCCCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHhc-CCccC-CCeeEEEEEECC
Confidence              46555554321 12346777777777776654  3455788889999999999999875 44432 234667788886


Q ss_pred             CCCcchHHHHHHH-hhcCceecc
Q psy10669        259 KNKLTGSKVELVL-EEIAIACNK  280 (337)
Q Consensus       259 ~~~~~~~~~~~~L-~~~gI~v~~  280 (337)
                      .  .+..++.+.| +++||.+.+
T Consensus       335 ~--~~~~~~~~~l~~~~gi~v~~  355 (396)
T 3jtx_A          335 D--GDDLAFARNLWQKAAIQVLP  355 (396)
T ss_dssp             T--SCHHHHHHHHHHHHCEECEE
T ss_pred             C--CCHHHHHHHHHHHCCEEEeC
Confidence            5  3566666666 668999865

>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*

Probab=98.96  E-value=4.4e-09  Score=101.24  Aligned_cols=217  Identities=12%  Similarity=0.052  Sum_probs=130.5

Q ss_pred             eeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcC-ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHH
Q psy10669         35 LIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYG-GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVC  113 (337)
Q Consensus        35 l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~-G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~  113 (337)
                      .+.+-.+..+.+.+++. .+.+.    ..+-.|-. .....++++    +++++++|.+.     .+.++||+.|+..++
T Consensus        31 d~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~l~----~~la~~~g~~~-----~i~~~sG~~a~~~~l   96 (398)
T 2rfv_A           31 IFQTSTFVFDSAEQGAA-RFALE----ESGYIYTRLGNPTTDALE----KKLAVLERGEA-----GLATASGISAITTTL   96 (398)
T ss_dssp             CCCCSBCCCSSHHHHHH-HC---------CCSBTTTCCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHH
T ss_pred             CcCCCccccCCHHHHHH-hhcCC----CCCCceeCCCChHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHH
Confidence            44455566677777664 21221    11111111 223344555    68889999873     688999999998888


Q ss_pred             HhhCCc--------------------------------------cc--c---cccEEEEcCcc--cccccChHHHHHHhh
Q psy10669        114 EKALPT--------------------------------------NN--A---RFDFLSSGTTC--YSRCLDYARFRQICD  148 (337)
Q Consensus       114 ~aLl~~--------------------------------------~~--a---~pklII~~~S~--~~~~~d~~~l~eia~  148 (337)
                      .+++++                                      .+  +   ++++|++..-+  .+...|+++|.++|+
T Consensus        97 ~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~  176 (398)
T 2rfv_A           97 LTLCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAAKPEEIRAAMRPETKVVYIETPANPTLSLVDIETVAGIAH  176 (398)
T ss_dssp             HHHCCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTTSHHHHHHHCCTTEEEEEEESSBTTTTBCCCHHHHHHHHH
T ss_pred             HHHhCCCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCCCCHHHHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHH
Confidence            888654                                      00  0   26777775323  257889999999999


Q ss_pred             hcCCeEEEeccccccccc--------eeeeec-c-----C---Cchhhh--hHHH-HHhhccCCCC-CCCCcHHHHHHHH
Q psy10669        149 ETDSIMFADMSHISGLIA--------GVKGVT-K-----T---GEKILY--DYEE-KINNAVFPSL-QGGPHNHAIGAIA  207 (337)
Q Consensus       149 ~~ga~l~vD~AH~~Gli~--------g~~~T~-~-----~---Gg~i~~--~l~~-~i~~~~~p~~-~g~~~~~~iaala  207 (337)
                      ++|+++++|++|..|...        .++++. |     .   ||+++.  ++.+ .+..... .. .++.++...++..
T Consensus       177 ~~~~~li~De~~~~~~~~~~~~~~~di~~~s~sK~~~~~g~~~~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  255 (398)
T 2rfv_A          177 QQGALLVVDNTFMSPYCQQPLQLGADIVVHSVTKYINGHGDVIGGIIVGKQEFIDQARFVGLK-DITGGCMSPFNAWLTL  255 (398)
T ss_dssp             HTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTHHH-HTTCCCCCHHHHHHHH
T ss_pred             HcCCEEEEECCCcccccCCchhhCCcEEEEeCcccccCCCCceEEEEEECHHHHHHHHHHHHH-hCCCCCCCHHHHHHHH
Confidence            999999999999988764        122332 2     1   466654  3433 4443322 22 2456666655555


Q ss_pred             HHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC---------------CEEecC--CCCCeEEEEEecCCCcchHHHHHH
Q psy10669        208 TAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG---------------YHVVTG--GTDVHLILIDLRKNKLTGSKVELV  270 (337)
Q Consensus       208 ~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G---------------~~v~~~--~t~~h~v~V~~~~~~~~~~~~~~~  270 (337)
                      .++..     ...+.++..+|++.+++.|.+.+               +++...  .....++.+++...   .......
T Consensus       256 ~~l~~-----~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~l  327 (398)
T 2rfv_A          256 RGVKT-----LGIRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIAGG---LEAGRRM  327 (398)
T ss_dssp             HHHTT-----HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTH---HHHHHHH
T ss_pred             hhhhh-----HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCC---HHHHHHH
Confidence            55432     34567778899999999998754               222110  13467788877531   3345566


Q ss_pred             Hhhc
Q psy10669        271 LEEI  274 (337)
Q Consensus       271 L~~~  274 (337)
                      +++.
T Consensus       328 ~~~~  331 (398)
T 2rfv_A          328 INSV  331 (398)
T ss_dssp             HTTC
T ss_pred             HHhC
Confidence            6654

>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*

Probab=98.96  E-value=1.6e-08  Score=96.82  Aligned_cols=229  Identities=16%  Similarity=0.081  Sum_probs=138.8

Q ss_pred             CCC---CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhh
Q psy10669         40 NFT---SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKA  116 (337)
Q Consensus        40 n~~---~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aL  116 (337)
                      |++   +|.|.+++...+. ++.  ..++ .| ......+++    +++++++|.+.     .+..+||+.||..++.++
T Consensus        52 ~~lg~~~~~v~~a~~~~~~-~~~--~~~~-~~-~~~~~~~l~----~~la~~~g~~~-----v~~~~gg~~a~~~al~~~  117 (397)
T 2ord_A           52 NVLGHSHPRLVEAIKDQAE-KLI--HCSN-LF-WNRPQMELA----ELLSKNTFGGK-----VFFANTGTEANEAAIKIA  117 (397)
T ss_dssp             CTTCBTCHHHHHHHHHHHH-HCS--CCCT-TS-EEHHHHHHH----HHHHHTTTSCE-----EEEESSHHHHHHHHHHHH
T ss_pred             cccCCCCHHHHHHHHHHHH-hcc--cCcc-cc-CCHHHHHHH----HHHHHhcCCCe-----EEEeCCHHHHHHHHHHHH
Confidence            555   8999999987654 332  2222 22 223334454    68889998542     344556689988877776


Q ss_pred             C-------C-c-----------------------c------------c-----------c-----cccEEEEcCccc--c
Q psy10669        117 L-------P-T-----------------------N------------N-----------A-----RFDFLSSGTTCY--S  135 (337)
Q Consensus       117 l-------~-~-----------------------~------------~-----------a-----~pklII~~~S~~--~  135 (337)
                      .       + +                       +            .           .     ++++|++..-.+  +
T Consensus       118 ~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG  197 (397)
T 2ord_A          118 RKYGKKKSEKKYRILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYFEFNNVEDLRRKMSEDVCAVFLEPIQGESG  197 (397)
T ss_dssp             HHHHHHHCTTCCEEEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCCTTEEEECTTCHHHHHHHCCTTEEEEEECSEECTTT
T ss_pred             HHHhhcCCCCCceEEEEcCCcCCCchhhhhccCChhhccccCCCCCCeeEecCCCHHHHHHHhhcCeEEEEEecccCCCC
Confidence            3       2 2                       1            1           0     157888764222  2


Q ss_pred             c----ccChHHHHHHhhhcCCeEEEecccccccc--c--------e----eeeecc------CCchhhh--hHHHHHhhc
Q psy10669        136 R----CLDYARFRQICDETDSIMFADMSHISGLI--A--------G----VKGVTK------TGEKILY--DYEEKINNA  189 (337)
Q Consensus       136 ~----~~d~~~l~eia~~~ga~l~vD~AH~~Gli--~--------g----~~~T~~------~Gg~i~~--~l~~~i~~~  189 (337)
                      .    ..++++|.++|+++|++|++|++|+ |+.  +        +    +.+..|      ..|+++.  ++. .+...
T Consensus       198 ~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~r~G~~~~~~~~~-~l~~~  275 (397)
T 2ord_A          198 IVPATKEFLEEARKLCDEYDALLVFDEVQC-GMGRTGKLFAYQKYGVVPDVLTTAKGLGGGVPIGAVIVNERAN-VLEPG  275 (397)
T ss_dssp             CEECCHHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSHHHHHTCCCSEEEECGGGGTTSCCEEEEECSTTC-CCCTT
T ss_pred             cccCCHHHHHHHHHHHHHcCCEEEEEeccc-CCccCccchhhhhhCCCCCeeeeccccCCCcCeEEEEEchHhc-ccCCC
Confidence            3    3577888899999999999999996 542  1        1    111112      1133332  343 33321


Q ss_pred             cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCEEec-CCCCCeEEEEEecCCCcchHH
Q psy10669        190 VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYHVVT-GGTDVHLILIDLRKNKLTGSK  266 (337)
Q Consensus       190 ~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~v~~-~~t~~h~v~V~~~~~~~~~~~  266 (337)
                      .... .-++++...+++..++..+.+   ++.++++.++.++|.+.|.+.  ++.+.. ......++++++... .+..+
T Consensus       276 ~~~~-~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~  350 (397)
T 2ord_A          276 DHGT-TFGGNPLACRAGVTVIKELTK---EGFLEEVEEKGNYLMKKLQEMKEEYDVVADVRGMGLMIGIQFREE-VSNRE  350 (397)
T ss_dssp             SSCC-SSTTCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEECTT-SCHHH
T ss_pred             CcCC-CCCCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHHhCCceEEEEEEeEEEEEEECCh-HHHHH
Confidence            1111 224566777777777766532   467888999999999999875  344321 012345677887653 35777


Q ss_pred             HHHHHhhcCceeccC--cccchhhh
Q psy10669        267 VELVLEEIAIACNKN--TGISLAAE  289 (337)
Q Consensus       267 ~~~~L~~~gI~v~~~--~girig~~  289 (337)
                      +.+.|.+.||.+.+.  ..+||+.+
T Consensus       351 l~~~l~~~gi~v~~~~~~~iRis~~  375 (397)
T 2ord_A          351 VATKCFENKLLVVPAGNNTIRFLPP  375 (397)
T ss_dssp             HHHHHHHTTEECEEETTTEEEECCC
T ss_pred             HHHHHHHCCCEEccCCCCEEEEECC
Confidence            888888889999864  26787743

>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*

Probab=98.95  E-value=9.6e-08  Score=91.68  Aligned_cols=235  Identities=14%  Similarity=0.098  Sum_probs=136.7

Q ss_pred             ccceeeeccCCC--CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhh--cC-CCCCCCcceeecCC
Q psy10669         30 INGIELIASENF--TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKA--FN-LDPEQWGCNVQPYS  104 (337)
Q Consensus        30 ~~~i~l~asen~--~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~l--fg-~~~~~~~~~v~~~S  104 (337)
                      ...|.|...++-  .+|.|++++...+.. +... .+...|.-.....+++    +.++++  +| .+.    .+|.+++
T Consensus        33 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~-~~~~-~~~~~y~~~~g~~~lr----~~la~~l~~g~~~~----~~v~~~~  102 (400)
T 3asa_A           33 HTVINLSIGDTTQPLNASVAEAFASSIAR-LSSP-TTCRGYGPDFGLPALR----QKLSEDFYRGFVDA----KEIFISD  102 (400)
T ss_dssp             SCCEECSSCCCCCCCCHHHHHHHHHHHHH-HTSS-SCCCCCCCTTCCHHHH----HHHHHTTSTTSSCG----GGEEEES
T ss_pred             CceEeccCCCCCCCCCHHHHHHHHHHHhc-cccc-ccccCCCCCCCCHHHH----HHHHHHHHcCCCCH----HHEEEcc
Confidence            345666665553  489999999876543 2111 1111122112223444    566777  57 444    2588888


Q ss_pred             Cc-hhHHHHHHhhCCc-----------------------c----------------c---ccccEEEEcCccc--ccccC
Q psy10669        105 GS-PANFAVCEKALPT-----------------------N----------------N---ARFDFLSSGTTCY--SRCLD  139 (337)
Q Consensus       105 gt-~AN~~v~~aLl~~-----------------------~----------------~---a~pklII~~~S~~--~~~~d  139 (337)
                      |+ +++..+ ..++++                       +                +   .++++|++....+  +...|
T Consensus       103 G~~~al~~~-~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~l~~p~nptG~~~~  181 (400)
T 3asa_A          103 GAKVDLFRL-LSFFGPNQTVAIQDPSYPAYLDIARLTGAKEIIALPCLQENAFFPEFPEDTHIDILCLCSPNNPTGTVLN  181 (400)
T ss_dssp             CHHHHHHHH-HHHHCSSCEEEEEESCCHHHHHHHHHTTCSEEEEEECCGGGTTCCCCCTTCCCSEEEEESSCTTTCCCCC
T ss_pred             ChHHHHHHH-HHHcCCCCEEEECCCCcHHHHHHHHHcCCcceEecccchhcCcccChhhccCccEEEEeCCCCCCCCcCC
Confidence            84 565554 344332                       1                0   1257777753333  45555


Q ss_pred             h---HHHHHHhhhcCCeEEEecccc-c---cc----cc---------eeeeec-c----CC---chhhh--hH-------
Q psy10669        140 Y---ARFRQICDETDSIMFADMSHI-S---GL----IA---------GVKGVT-K----TG---EKILY--DY-------  182 (337)
Q Consensus       140 ~---~~l~eia~~~ga~l~vD~AH~-~---Gl----i~---------g~~~T~-~----~G---g~i~~--~l-------  182 (337)
                      .   ++|.++|+++|+++++|++|. .   |-    +.         .+.+|. |    .|   |+++.  ++       
T Consensus       182 ~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG~~~~~~~~~~~~~~~  261 (400)
T 3asa_A          182 KDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGWTVIPQELTYADGHF  261 (400)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECCGGGTTTTCCCEEEECCTTCBCTTSCB
T ss_pred             HHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEEEecchhhcCCcchheeEEeeChhhccchhhh
Confidence            4   456788999999999999998 3   21    10         112333 2    23   55544  34       


Q ss_pred             HHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEE-ecCCC
Q psy10669        183 EEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILID-LRKNK  261 (337)
Q Consensus       183 ~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~-~~~~~  261 (337)
                      .+.+.........++++++..+++..++...   ..++.++++.++.++|.+.|.+.|+++..+ ..+..++++ +.. +
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~~~~~~-~  336 (400)
T 3asa_A          262 VIQDWERFLSTTFNGASIPAQEAGVAGLSIL---PQLEAIHYYRENSDLLRKALLATGFEVFGG-EHAPYLWVKPTQA-N  336 (400)
T ss_dssp             HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHT---TTCHHHHHHHHHHHHHHHHHHHTTCEEEEC-SSSSEEEEECCCT-T
T ss_pred             HHHHHHHHhccCccCCChHHHHHHHHHhCcH---HHHHHHHHHHHHHHHHHHHHHHCCCeeeCC-CCceEEEEeccCC-C
Confidence            3333211111123466777777776666543   356778899999999999999999988753 335567887 643 3


Q ss_pred             cchHHHHHHH-hhcCceecc
Q psy10669        262 LTGSKVELVL-EEIAIACNK  280 (337)
Q Consensus       262 ~~~~~~~~~L-~~~gI~v~~  280 (337)
                      .+..++...| +++||.+.+
T Consensus       337 ~~~~~~~~~l~~~~gv~v~~  356 (400)
T 3asa_A          337 ISDRDLFDFFLREYHIAITP  356 (400)
T ss_dssp             CCTTTHHHHHHHHHSEECEE
T ss_pred             CCHHHHHHHHHHhCCEEEeC
Confidence            4554455544 567999875

>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*

Probab=98.95  E-value=4.2e-08  Score=92.88  Aligned_cols=194  Identities=13%  Similarity=0.095  Sum_probs=124.5

Q ss_pred             HHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHhhCC---c--------------------------------------
Q psy10669         82 QQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEKALP---T--------------------------------------  119 (337)
Q Consensus        82 ~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~aLl~---~--------------------------------------  119 (337)
                      ++.+++++|.+.    .+|.+++| ++++..++.++++   +                                      
T Consensus        64 r~~la~~~~~~~----~~v~~~~G~~~ai~~~~~~~~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~  139 (356)
T 1fg7_A           64 IENYAQYAGVKP----EQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTLDNWQLDLQG  139 (356)
T ss_dssp             HHHHHHHHTSCG----GGEEEESHHHHHHHHHHHHHCCTTTCEEEECSSSCTHHHHHHHHHTCEEEECCCCTTSCCCHHH
T ss_pred             HHHHHHHhCCCh----HHEEEcCCHHHHHHHHHHHHhCCCCCEEEEeCCChHHHHHHHHHcCCEEEEeeCCCCCCCCHHH
Confidence            467889999875    36888888 6788788888863   2                                      


Q ss_pred             -ccc--cccEEEEcCccc--ccccChHHHHHHhhh--cCCeEEEeccccccc-----cc--------eeeeeccC-----
Q psy10669        120 -NNA--RFDFLSSGTTCY--SRCLDYARFRQICDE--TDSIMFADMSHISGL-----IA--------GVKGVTKT-----  174 (337)
Q Consensus       120 -~~a--~pklII~~~S~~--~~~~d~~~l~eia~~--~ga~l~vD~AH~~Gl-----i~--------g~~~T~~~-----  174 (337)
                       +.+  ++++|++..-++  +...|.+++.+|++.  +|+++++|++|..+.     ..        .+..|..|     
T Consensus       140 l~~~i~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  219 (356)
T 1fg7_A          140 ISDKLDGVKVVYVCSPNNPTGQLINPQDFRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALA  219 (356)
T ss_dssp             HHTSCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTTCEEEEECTTGGGSGGGCSGGGTTTCTTEEEEEESSSTTCCG
T ss_pred             HHHHhcCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCCEEEEEccchhhcCCCcHHHHHhhCCCEEEEecchHhhcCc
Confidence             001  356677653333  467777766655443  899999999998432     11        12233322     


Q ss_pred             C---chhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC--CEEecCC
Q psy10669        175 G---EKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG--YHVVTGG  247 (337)
Q Consensus       175 G---g~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G--~~v~~~~  247 (337)
                      |   |+++.  ++.+.+.....+.   +++++..++...++........++.++++.++.++|.+.|.+.|  +.+..  
T Consensus       220 G~r~G~~~~~~~~~~~l~~~~~~~---~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~--  294 (356)
T 1fg7_A          220 GLRCGFTLANEEVINLLMKVIAPY---PLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQVFD--  294 (356)
T ss_dssp             GGCCEEEEECHHHHHHHHHHSCSS---CSCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECC--
T ss_pred             hhhhEEEEeCHHHHHHHHHhcCCC---CCCHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEECC--
Confidence            2   55554  5667666553332   45666666655555432101156778889999999999999876  44433  


Q ss_pred             CCCeEEEEEecCCCcchHHHHHHHhhcCceecc-Cc------ccchhh
Q psy10669        248 TDVHLILIDLRKNKLTGSKVELVLEEIAIACNK-NT------GISLAA  288 (337)
Q Consensus       248 t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~-~~------girig~  288 (337)
                      +....+++++.    +..++.+.|.+.||.+.+ -.      .+||+.
T Consensus       295 ~~~~~~~~~~~----~~~~l~~~L~~~gI~v~~~g~~~~~~~~iRis~  338 (356)
T 1fg7_A          295 SETNYILARFK----ASSAVFKSLWDQGIILRDQNKQPSLSGCLRITV  338 (356)
T ss_dssp             CSSSEEEEEET----THHHHHHHHHHTTEECEECTTSTTCTTEEEEEC
T ss_pred             CCCeEEEEECC----CHHHHHHHHHHCCEEEEECCCCCCCCCeEEEEe
Confidence            34556678775    567788888889999987 22      477764

>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*

Probab=98.93  E-value=1.2e-08  Score=99.77  Aligned_cols=226  Identities=12%  Similarity=0.038  Sum_probs=133.8

Q ss_pred             cceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHH
Q psy10669         31 NGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANF  110 (337)
Q Consensus        31 ~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~  110 (337)
                      -...+.-|-.|.-|...+.. ..+..+...++.-.|+  ++...+++|    +++++++|.+.     .+.++||+.||.
T Consensus        44 ~~~pi~~s~t~~~~~~~~~~-~~~~~~~~~~~~y~r~--~~p~~~~le----~~lA~l~g~~~-----~i~~ssGt~Ai~  111 (415)
T 2fq6_A           44 VNSVIQRASSLVFDSVEAKK-HATRNRANGELFYGRR--GTLTHFSLQ----QAMCELEGGAG-----CVLFPCGAAAVA  111 (415)
T ss_dssp             SSCCBCCCSCBCCSSHHHHH-HHHHTTTTTSCCCTTT--CCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHH
T ss_pred             EeCCeecccceeeCCHHHHH-HhhccccCCCccccCC--CCchHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHH
Confidence            34567777788744432211 1111110112332332  455567777    58899999874     688899999998


Q ss_pred             HHHHhhCCc----------------------------------------ccc---cccEEEEcCcc--cccccChHHHHH
Q psy10669        111 AVCEKALPT----------------------------------------NNA---RFDFLSSGTTC--YSRCLDYARFRQ  145 (337)
Q Consensus       111 ~v~~aLl~~----------------------------------------~~a---~pklII~~~S~--~~~~~d~~~l~e  145 (337)
                      .++.+++++                                        +.+   ++|+|++...+  .+...|+++|.+
T Consensus       112 ~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~d~~~le~ai~~~tklV~~e~~~NptG~v~dl~~I~~  191 (415)
T 2fq6_A          112 NSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPLIGADIVKHLQPNTKIVFLESPGSITMEVHDVPAIVA  191 (415)
T ss_dssp             HHHHTTCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECTTCGGGGGGGCCTTEEEEEEESSCTTTCCCCCHHHHHH
T ss_pred             HHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEECCCCHHHHHHhhccCCcEEEEECCCCCCCEeecHHHHHH
Confidence            889998764                                        111   15788875333  358889999999


Q ss_pred             Hhhh--cCCeEEEeccccccccc--------eeeeec-c----C----Cchhhh--hHHHHHhhccCCCCCCCCcHHHHH
Q psy10669        146 ICDE--TDSIMFADMSHISGLIA--------GVKGVT-K----T----GEKILY--DYEEKINNAVFPSLQGGPHNHAIG  204 (337)
Q Consensus       146 ia~~--~ga~l~vD~AH~~Gli~--------g~~~T~-~----~----Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~ia  204 (337)
                      +|++  +|+++++|++|..|+..        .++++. |    .    ||+++.  ++.+.+.....  ..|+...+..+
T Consensus       192 la~~~~~g~~livD~a~a~~~~~~p~~~g~Div~~S~sK~lg~~g~~~~G~l~~~~~~~~~l~~~~~--~~G~~~~~~~a  269 (415)
T 2fq6_A          192 AVRSVVPDAIIMIDNTWAAGVLFKALDFGIDVSIQAATKYLVGHSDAMIGTAVCNARCWEQLRENAY--LMGQMVDADTA  269 (415)
T ss_dssp             HHHHHCTTCEEEEECTTTTTTSSCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECTTTHHHHHHHHH--HTTCCCCHHHH
T ss_pred             HHHhhcCCCEEEEECCCcccccCCccccCCeEEEEeCccccCCCCCceEEEEEeCHHHHHHHHHHHH--hcCCCCCHHHH
Confidence            9999  99999999999987532        133333 2    1    466654  45454443211  12233333323


Q ss_pred             HHH-HHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCE-EecCC---------------CCCeEEEEEecCCCcchHH
Q psy10669        205 AIA-TAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYH-VVTGG---------------TDVHLILIDLRKNKLTGSK  266 (337)
Q Consensus       205 ala-~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~-v~~~~---------------t~~h~v~V~~~~~~~~~~~  266 (337)
                      .++ .++.     ....+.++..+|++.+++.|.+. ++. +...+               ...+++.+.+... .+..+
T Consensus       270 ~~~~~~l~-----~l~~r~~~~~~n~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~~~g~i~sf~l~g~-~~~~~  343 (415)
T 2fq6_A          270 YITSRGLR-----TLGVRLRQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKK-LNNEE  343 (415)
T ss_dssp             HHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSC-CCHHH
T ss_pred             HHHHhhhh-----HHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCC-CCHHH
Confidence            222 2222     34567788899999999999885 232 21111               1356777777531 12355


Q ss_pred             HHHHHhhcCc
Q psy10669        267 VELVLEEIAI  276 (337)
Q Consensus       267 ~~~~L~~~gI  276 (337)
                      +.+.|+...+
T Consensus       344 ~~~~l~~l~~  353 (415)
T 2fq6_A          344 LANYLDNFSL  353 (415)
T ss_dssp             HHHHHTTCSS
T ss_pred             HHHHHHhCCc
Confidence            6677776543

>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*

Probab=98.93  E-value=4.1e-08  Score=95.80  Aligned_cols=213  Identities=15%  Similarity=0.179  Sum_probs=130.9

Q ss_pred             CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc--
Q psy10669         42 TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT--  119 (337)
Q Consensus        42 ~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~--  119 (337)
                      +++.+.+++...           ...|.......+++    +++++++|.+.     .+..+||+.|+..++.+++++  
T Consensus        56 ~~~~~~~a~~~~-----------~~~y~~~~~~~~l~----~~la~~~~~~~-----~~~~~~gt~a~~~al~~l~~~gd  115 (456)
T 2ez2_A           56 MSDKQWAGMMMG-----------DEAYAGSENFYHLE----RTVQELFGFKH-----IVPTHQGRGAENLLSQLAIKPGQ  115 (456)
T ss_dssp             CCHHHHHHHTTC-----------CCCSSSCHHHHHHH----HHHHHHHCCSE-----EEEESSHHHHHHHHHHHHCCTTC
T ss_pred             CCHHHHHHhhcc-----------hhhcccChhHHHHH----HHHHHHhCCCc-----EEEeCCcHHHHHHHHHHhCCCCC
Confidence            468888877521           11233344445565    57889999864     466677799988888887542  


Q ss_pred             ---------------------------c------------cc----------c--c----cEEEEc-Ccc--cccccC--
Q psy10669        120 ---------------------------N------------NA----------R--F----DFLSSG-TTC--YSRCLD--  139 (337)
Q Consensus       120 ---------------------------~------------~a----------~--p----klII~~-~S~--~~~~~d--  139 (337)
                                                 .            -.          +  +    ++|++. +.+  .+...|  
T Consensus       116 i~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~~~~~~v~l~~p~n~ptG~~~~~~  195 (456)
T 2ez2_A          116 YVAGNMYFTTTRYHQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAGGQPVSMA  195 (456)
T ss_dssp             EEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHH
T ss_pred             EeccccccchhHHHHHHcCCEEEEecccccccccccccccCCCCHHHHHHHHHhccccceeEEEEeccCCCCCCccCCHH
Confidence                                       1            00          0  3    666665 433  356776  


Q ss_pred             -hHHHHHHhhhcCCeEEEecccccc---------c-c------------c----eeeeecc------CCchhhh---hHH
Q psy10669        140 -YARFRQICDETDSIMFADMSHISG---------L-I------------A----GVKGVTK------TGEKILY---DYE  183 (337)
Q Consensus       140 -~~~l~eia~~~ga~l~vD~AH~~G---------l-i------------~----g~~~T~~------~Gg~i~~---~l~  183 (337)
                       +++|.++|+++|++|++|++|..|         + .            +    .++++.|      .||++++   ++.
T Consensus       196 ~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~S~kk~~~~~~gG~~~~~~~~~~  275 (456)
T 2ez2_A          196 NMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCTMSGKKDCLVNIGGFLCMNDDEMF  275 (456)
T ss_dssp             HHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEEEETTTTTCCSSCEEEEESCHHHH
T ss_pred             HHHHHHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhcccCCEEEEeCcccCCCCceeEEEECCHHHH
Confidence             788889999999999999999875         1 1            1    1222222      3677764   355


Q ss_pred             HHHhhcc---CC-CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecC
Q psy10669        184 EKINNAV---FP-SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRK  259 (337)
Q Consensus       184 ~~i~~~~---~p-~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~  259 (337)
                      +.+....   .. ...++.+...+++++.++.+...   +++.++..+++++|.+.|.+.|+++.. ....+.+++++..
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~~~~~---~~~~~~~~~~~~~l~~~L~~~g~~~~~-p~~~~~~~~~~~~  351 (456)
T 2ez2_A          276 SSAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQ---YEYIEHRVKQVRYLGDKLKAAGVPIVE-PVGGHAVFLDARR  351 (456)
T ss_dssp             HHHHHHHHHHTCCTTTTTCCHHHHHHHHHHHHHHTC---HHHHHHHHHHHHHHHHHHHHTTCCBCS-SCCSSEEEEEHHH
T ss_pred             HHHHHHHhhccCcccccCcchhHHHHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHhcCCCcccc-CCCceEEEEEhHH
Confidence            5443211   11 11234444555554555544321   467888888999999999998888764 2457788888742


Q ss_pred             --CCcchHHH-----HHHH-hhcCcee
Q psy10669        260 --NKLTGSKV-----ELVL-EEIAIAC  278 (337)
Q Consensus       260 --~~~~~~~~-----~~~L-~~~gI~v  278 (337)
                        .+.+..++     .+.| ++.||.+
T Consensus       352 ~~~~~~~~~~~~~~l~~~L~~~~gv~~  378 (456)
T 2ez2_A          352 FCEHLTQDEFPAQSLAASIYVETGVRS  378 (456)
T ss_dssp             HTTTSCGGGCHHHHHHHHHHHHHSEEC
T ss_pred             hcCCCChhhccHHHHHHHHHHhcCeee
Confidence              23333333     5555 6778875

>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*

Probab=98.93  E-value=4e-08  Score=97.19  Aligned_cols=218  Identities=12%  Similarity=0.044  Sum_probs=129.4

Q ss_pred             cCccchHHHHHHHHHHHHHhhcCCCCCCC-------cceeecCCCchhHHHHHHhhC--------------------Cc-
Q psy10669         68 YGGNQFIDEIEIVAQQRSLKAFNLDPEQW-------GCNVQPYSGSPANFAVCEKAL--------------------PT-  119 (337)
Q Consensus        68 ~~G~~~~~~lE~~~~~~~a~lfg~~~~~~-------~~~v~~~Sgt~AN~~v~~aLl--------------------~~-  119 (337)
                      |.......++|..+++.++++||.+.. |       +..+...+||.||+.++.++.                    ++ 
T Consensus       105 ~~~~~~~~~le~~~~~~la~l~g~~~~-~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~~~~~~~gd~~~~~~~~~~  183 (486)
T 1js3_A          105 WAASPACTELETVMMDWLGKMLQLPEA-FLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEKL  183 (486)
T ss_dssp             GGGCHHHHHHHHHHHHHHHHHTTCCGG-GCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHE
T ss_pred             cccChhHHHHHHHHHHHHHHHhCCCch-hcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhhhhccCccchhcccCCCE
Confidence            444455678998888999999999742 1       113555566889877664431                    01 


Q ss_pred             -------------------------------------ccc-----c------ccEEEEc-C-cccccccChHHHHHHhhh
Q psy10669        120 -------------------------------------NNA-----R------FDFLSSG-T-TCYSRCLDYARFRQICDE  149 (337)
Q Consensus       120 -------------------------------------~~a-----~------pklII~~-~-S~~~~~~d~~~l~eia~~  149 (337)
                                                           .+.     +      |.+|+++ + +.++..-|+++|.++|++
T Consensus       184 ~v~~s~~~h~s~~~~~~~~G~~v~~v~~d~~~~~d~~~L~~~i~~~~~~g~~p~~vv~~~~~n~tG~~~~l~~I~~la~~  263 (486)
T 1js3_A          184 VAYASDQAHSSVERAGLIGGVKLKAIPSDGKFAMRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHE  263 (486)
T ss_dssp             EEEEETTCCHHHHHHHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHH
T ss_pred             EEEECCCCcHHHHHHHHhCCCceEEeecCCCCCCCHHHHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCCHHHHHHHHHH
Confidence                                                 000     0      2366665 3 345788899999999999


Q ss_pred             cCCeEEEeccccccccc------------e---eeee-cc-----C-Cchhhh-h---HHHHHhh---ccCCC-------
Q psy10669        150 TDSIMFADMSHISGLIA------------G---VKGV-TK-----T-GEKILY-D---YEEKINN---AVFPS-------  193 (337)
Q Consensus       150 ~ga~l~vD~AH~~Gli~------------g---~~~T-~~-----~-Gg~i~~-~---l~~~i~~---~~~p~-------  193 (337)
                      +|++++||+||+.|.+.            +   +++. +|     . .|+++. +   +.+.+..   .++..       
T Consensus       264 ~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~p~~~G~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~  343 (486)
T 1js3_A          264 EDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNFDCSAMWVKRRTDLTGAFKLDPVYLKHSHQGSGLI  343 (486)
T ss_dssp             TTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESCHHHHHGGGC------------CCSC
T ss_pred             cCCEEEEehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcCCCcceEEEEEeCHHHHHHHhcCCchhhCCCcccccCC
Confidence            99999999999987642            1   2222 22     2 255543 2   2332210   01110       


Q ss_pred             -------CCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCCCcchH
Q psy10669        194 -------LQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKNKLTGS  265 (337)
Q Consensus       194 -------~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~~~~~~  265 (337)
                             +..+.. ....++.+++..+....++++.++..+++++|.+.|.+. |++++.. .+.+++.+.+........
T Consensus       344 ~~~~~~~~~~~rr-~~~~~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~~~~~v~f~~~~~~~~~~  421 (486)
T 1js3_A          344 TDYRHWQLPLGRR-FRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQDPRFEVCAE-VTLGLVCFRLKGSDGLNE  421 (486)
T ss_dssp             CCGGGSSSCSCCC-CTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEECSC-CCSSEEEEEESSCHHHHH
T ss_pred             CCccccCCCCCCc-hhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCC-CceeEEEEEecChHHHHH
Confidence                   011111 123455555555544567888999999999999999985 9998752 345666665542211136


Q ss_pred             HHHHHHhhcCcee-ccC-----cccchhh
Q psy10669        266 KVELVLEEIAIAC-NKN-----TGISLAA  288 (337)
Q Consensus       266 ~~~~~L~~~gI~v-~~~-----~girig~  288 (337)
                      ++.+.|.+.|+.+ ...     ..+|++.
T Consensus       422 ~l~~~L~~~g~~~~~~~~~~~~~~lRi~~  450 (486)
T 1js3_A          422 ALLERINSARKIHLVPCRLRGQFVLRFAI  450 (486)
T ss_dssp             HHHHHHHHHTSCBCEEEEETTEEEEEEEC
T ss_pred             HHHHHHHhcCCEEEEEEEECCEEEEEEEe
Confidence            6777777667542 221     1677763

>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*

Probab=98.92  E-value=2.5e-08  Score=97.51  Aligned_cols=152  Identities=14%  Similarity=0.165  Sum_probs=91.8

Q ss_pred             ccEEEEcCcccc---cc---cChHHHHHHhhhcCCeEEEeccccc-ccc----------c---------------eeeee
Q psy10669        124 FDFLSSGTTCYS---RC---LDYARFRQICDETDSIMFADMSHIS-GLI----------A---------------GVKGV  171 (337)
Q Consensus       124 pklII~~~S~~~---~~---~d~~~l~eia~~~ga~l~vD~AH~~-Gli----------~---------------g~~~T  171 (337)
                      +++|++....++   ..   .++++|+++|+++|++|++|++|.. |..          +               .++++
T Consensus       184 ~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~s  263 (467)
T 2oqx_A          184 VPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAMS  263 (467)
T ss_dssp             CCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCSEEEEE
T ss_pred             eeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHHHhhhhhccCCeEEEe
Confidence            467777643332   33   3467888999999999999998876 221          1               11223


Q ss_pred             c-c-----CCchhhh--h-HHH---HHhhcc--CCCC--CCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHH
Q psy10669        172 T-K-----TGEKILY--D-YEE---KINNAV--FPSL--QGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDE  235 (337)
Q Consensus       172 ~-~-----~Gg~i~~--~-l~~---~i~~~~--~p~~--~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~  235 (337)
                      . |     .||++++  + +.+   ++....  .++.  .++.....++++..++.+...   ++..++..++.++|.+.
T Consensus       264 ~sK~~g~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~l~~~~~---~~~~~~~~~~~~~l~~~  340 (467)
T 2oqx_A          264 AKKDAMVPMGGLLCMKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMN---LDWLAYRIAQVQYLVDG  340 (467)
T ss_dssp             SSSTTCCSSCEEEEECSGGGHHHHHHHHHHHHHTTSSCCCCCCCHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHH
T ss_pred             cccccCCCCceEEEecChhHHHHHHHHHHhhhccCCcccccchhhhHHHHHHHhhHhhhh---HHHHHHHHHHHHHHHHH
Confidence            2 2     3677654  4 333   333221  2222  344455555555555443322   23556677899999999


Q ss_pred             HHhCCCEEecCCCCCeEEEEEecC--CCcc-----hHHHHHHH-hhcCceecc
Q psy10669        236 MIKRGYHVVTGGTDVHLILIDLRK--NKLT-----GSKVELVL-EEIAIACNK  280 (337)
Q Consensus       236 L~~~G~~v~~~~t~~h~v~V~~~~--~~~~-----~~~~~~~L-~~~gI~v~~  280 (337)
                      |.+.|+++. . ..++.+++++..  .+.+     +..+.+.| .+.||.+.+
T Consensus       341 L~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~  391 (467)
T 2oqx_A          341 LEEIGVVCQ-Q-AGGHAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVE  391 (467)
T ss_dssp             HHHTTCCEE-E-ECSSCEEEEHHHHSTTSCGGGCHHHHHHHHHHHHHCEECEE
T ss_pred             HHHCCCeee-c-CCceEEEEechhhcccCCcccccHHHHHHHHHHhcCceecc
Confidence            998888876 2 456788888753  2223     34456777 788999865

>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1

Probab=98.92  E-value=2.8e-08  Score=92.94  Aligned_cols=228  Identities=15%  Similarity=0.170  Sum_probs=131.6

Q ss_pred             eccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeec-CCCchhHHHH
Q psy10669         36 IASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQP-YSGSPANFAV  112 (337)
Q Consensus        36 ~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~-~Sgt~AN~~v  112 (337)
                      +.++|..  +|.|++++...+.     ++  ...|+......++    ++.+++++|. .    .++.+ +||+.||..+
T Consensus        12 ~~~~~~~~~~~~v~~a~~~~~~-----~~--~~~~~~~~~~~~l----~~~la~~~g~-~----~~v~~~~~gt~a~~~a   75 (356)
T 1v72_A           12 FSSDNIAGASPEVAQALVKHSS-----GQ--AGPYGTDELTAQV----KRKFCEIFER-D----VEVFLVPTGTAANALC   75 (356)
T ss_dssp             CSCGGGCCCCHHHHHHHHHTTS-----SC--CCSTTCSHHHHHH----HHHHHHHHTS-C----CEEEEESCHHHHHHHH
T ss_pred             eccCCccCCCHHHHHHHHhhcc-----Cc--ccccccchHHHHH----HHHHHHHhCC-C----CcEEEeCCccHHHHHH
Confidence            3344443  8999999976431     11  1122222222334    4688889993 3    25444 6668898888


Q ss_pred             HHhhCCc---------------------------------------------c-cc---------cccEEEEcC-ccccc
Q psy10669        113 CEKALPT---------------------------------------------N-NA---------RFDFLSSGT-TCYSR  136 (337)
Q Consensus       113 ~~aLl~~---------------------------------------------~-~a---------~pklII~~~-S~~~~  136 (337)
                      +.+++++                                             + ..         +|++|++.. ++.+.
T Consensus        76 l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~tG~  155 (356)
T 1v72_A           76 LSAMTPPWGNIYCHPASHINNDECGAPEFFSNGAKLMTVDGPAAKLDIVRLRERTREKVGDVHTTQPACVSITQATEVGS  155 (356)
T ss_dssp             HHTSCCTTEEEEECTTSHHHHSSTTHHHHHTTSCEEEECCCGGGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCTTSC
T ss_pred             HHHhcCCCCEEEEcCccchhhhhchHHHHHhCCcEEEEecCCCCeEcHHHHHHHhhhcchhhccCCceEEEEEcCCCCCc
Confidence            8887543                                             1 11         146666653 34456


Q ss_pred             ---ccChHHHHHHhhhcCCeEEEecccccccc--------------c--eeeeec-c----CC-chhhh--hHHHHHhhc
Q psy10669        137 ---CLDYARFRQICDETDSIMFADMSHISGLI--------------A--GVKGVT-K----TG-EKILY--DYEEKINNA  189 (337)
Q Consensus       137 ---~~d~~~l~eia~~~ga~l~vD~AH~~Gli--------------~--g~~~T~-~----~G-g~i~~--~l~~~i~~~  189 (337)
                         ..|+++|.++|+++|++|++|++|..+..              .  .++.+. |    .| |+++.  ++.+.+...
T Consensus       156 ~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~g~~~G~g~~~~~~~~~~~~~~~  235 (356)
T 1v72_A          156 IYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKNGVLAAEAIVLFNTSLATEMSYR  235 (356)
T ss_dssp             CCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGGGTCCEEEECCGGGTCSSCEEEEESSGGGHHHHHHH
T ss_pred             cCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHhhhhhcCCEEEEecccCCCcCccEEEEECHHHHhhHHHH
Confidence               45567788999999999999999964211              0  122222 2    35 46654  455544321


Q ss_pred             cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-CCCEEecCCCCCeEEEEEecCCCcchHHHH
Q psy10669        190 VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-RGYHVVTGGTDVHLILIDLRKNKLTGSKVE  268 (337)
Q Consensus       190 ~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~  268 (337)
                      ..+  .|+...+...+...++..+.+..+.+..++..++.++|.+.|.+ .|+++... ..++.+++++.      .++.
T Consensus       236 ~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~-~~~~~~~~~~~------~~~~  306 (356)
T 1v72_A          236 RKR--AGHLSSKMRFLSAQIDAYLTDDLWLRNARKANAAAQRLAQGLEGLGGVEVLGG-TEANILFCRLD------SAMI  306 (356)
T ss_dssp             HHH--TTCCCSSTHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEESC-CCSSEEEEEEC------HHHH
T ss_pred             hhc--cCchhhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhCCCcEEccC-CCccEEEEEcC------HHHH
Confidence            110  11111111222222333332333556788889999999999988 59988643 45667777764      2567


Q ss_pred             HHHhhcCceeccC----cccchhh
Q psy10669        269 LVLEEIAIACNKN----TGISLAA  288 (337)
Q Consensus       269 ~~L~~~gI~v~~~----~girig~  288 (337)
                      +.|.+.||.+.+-    ..+||+.
T Consensus       307 ~~l~~~gi~v~~g~~~~~~iRi~~  330 (356)
T 1v72_A          307 DALLKAGFGFYHDRWGPNVVRFVT  330 (356)
T ss_dssp             HHHHHTTCBCBCSSSSTTEEEEEC
T ss_pred             HHHHhcCeEEeccccCCCeEEEEe
Confidence            7777789998742    2467753

>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}

Probab=98.91  E-value=5.6e-08  Score=94.43  Aligned_cols=156  Identities=7%  Similarity=-0.031  Sum_probs=89.4

Q ss_pred             ccEEEEc-Ccc-cccccC---hHHHHHHhhhcCCeEEEeccccccccc--------------eeeeeccC-------Cch
Q psy10669        124 FDFLSSG-TTC-YSRCLD---YARFRQICDETDSIMFADMSHISGLIA--------------GVKGVTKT-------GEK  177 (337)
Q Consensus       124 pklII~~-~S~-~~~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~--------------g~~~T~~~-------Gg~  177 (337)
                      +++|++. +++ .+...|   +++|.++|+++|+++++|++|..++-+              .+++|.+|       .|+
T Consensus       207 ~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~  286 (444)
T 3if2_A          207 IGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNIIYSDAHLNWDNNTILCFSLSKIGLPGMRTGI  286 (444)
T ss_dssp             EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCCCCCCTTEEEEEESTTTTCGGGCCEE
T ss_pred             ceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEECCCCCcccccccccccccCCCCEEEEechhhccCCCCceEE
Confidence            4666664 333 356677   666778899999999999999742211              12334322       255


Q ss_pred             hhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHh-chhhHH-HHHHHHHHHHHHHHHHHh----CCCEEecCCCC
Q psy10669        178 ILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQ-SDEFKS-YQAQVKANASHLSDEMIK----RGYHVVTGGTD  249 (337)
Q Consensus       178 i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~-~~~~~~-y~~~v~~na~~l~~~L~~----~G~~v~~~~t~  249 (337)
                      ++.  ++.+.+.....+... ++++...++++..+.... .....+ .++.+.++.+.+.+.|.+    .|+.+.. ...
T Consensus       287 ~~~~~~l~~~~~~~~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~  364 (444)
T 3if2_A          287 IVADAKVIEAVSAMNAVVNL-APTRFGAAIATPLVANDRIKQLSDNEIKPFYQKQATLAVKLLKQALGDYPLMIHK-PEG  364 (444)
T ss_dssp             EECCHHHHHHHHHHHHHHHS-SCCCHHHHHHHHHHHTSHHHHHHHHTHHHHHHHHHHHHHHHHHHHSSSSSEEEEC-CCB
T ss_pred             EEECHHHHHHHHHHHHhccC-CCChHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEec-CCc
Confidence            544  465555433221112 223333443333332211 011112 445566677777777765    2566653 234


Q ss_pred             CeEEEEEecCCCcchHHHHHHHhhcCceeccC
Q psy10669        250 VHLILIDLRKNKLTGSKVELVLEEIAIACNKN  281 (337)
Q Consensus       250 ~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~  281 (337)
                      +..+++++...+.+..++.+.|.+.||.+.+-
T Consensus       365 g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g  396 (444)
T 3if2_A          365 AIFLWLWFKDLPISTLDLYERLKAKGTLIVPS  396 (444)
T ss_dssp             SSEEEEEETTCSSCHHHHHHHHHHTTEECEEG
T ss_pred             cEEEEEEcCCCCCCHHHHHHHHHHCCeEEecc
Confidence            56677888765678888999999899998753

>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*

Probab=98.91  E-value=2.3e-08  Score=96.56  Aligned_cols=193  Identities=12%  Similarity=0.069  Sum_probs=115.6

Q ss_pred             chHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc--------------------------------
Q psy10669         72 QFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT--------------------------------  119 (337)
Q Consensus        72 ~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~--------------------------------  119 (337)
                      ...+++|    +++++++|.+.     .+.++||+.||..++.+++++                                
T Consensus        66 ~~~~~l~----~~la~~~g~~~-----~~~~~sGt~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v  136 (392)
T 3qhx_A           66 PTRTALE----AALAAVEDAAF-----GRAFSSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTGWNVEYTPV  136 (392)
T ss_dssp             HHHHHHH----HHHHHHTTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTGGGGTCEEEEE
T ss_pred             hHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHHHHhcCcEEEEe
Confidence            4445555    68899999874     688889999998888988654                                


Q ss_pred             --------ccc---cccEEEEcC-cc-cccccChHHHHHHhhhcCCeEEEeccccccccc--------eeeee-cc----
Q psy10669        120 --------NNA---RFDFLSSGT-TC-YSRCLDYARFRQICDETDSIMFADMSHISGLIA--------GVKGV-TK----  173 (337)
Q Consensus       120 --------~~a---~pklII~~~-S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~--------g~~~T-~~----  173 (337)
                              +.+   ++++|++.. ++ .+...|+++|.++|+++|+++++|++|..++..        .++.+ +|    
T Consensus       137 ~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~lg~  216 (392)
T 3qhx_A          137 ALADLDAVRAAIRPTTRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDNTFASPALQQPLSLGADVVLHSTTKYIGG  216 (392)
T ss_dssp             CTTCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTC
T ss_pred             CCCCHHHHHHhhCCCCeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEEEECCCcccccCChHHhCCcEEEEcCccccCC
Confidence                    001   267777653 22 357889999999999999999999999987654        12322 22    


Q ss_pred             ----CCchhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCE-Ee
Q psy10669        174 ----TGEKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYH-VV  244 (337)
Q Consensus       174 ----~Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~-v~  244 (337)
                          .||+++.   ++.+.+..... ....++++.. ++++..  .+  .....+.++..+|++++++.|.+. ++. +.
T Consensus       217 ~g~~~~G~v~~~~~~~~~~l~~~~~-~~g~~~~~~~-~~~~~~--~l--~~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~  290 (392)
T 3qhx_A          217 HSDVVGGALVTNDEELDQSFAFLQN-GAGAVPGPFD-AYLTMR--GL--KTLVLRMQRHSENAAAVAEFLAEHPAISTVL  290 (392)
T ss_dssp             SSCCCCEEEEESCHHHHHHHHHHHH-HHCCCCCHHH-HHHHHH--HH--TTHHHHHHHHHHHHHHHHHHHHTCTTEEEEE
T ss_pred             CCCceEEEEEECcHHHHHHHHHHHH-hcCCCCCHHH-HHHHHh--hh--hHHHHHHHHHHHHHHHHHHHHhcCCCcceEE
Confidence                1455553   35555443211 1112233322 222222  22  134567888999999999999874 342 32


Q ss_pred             cCCCC---------------CeEEEEEecCCCcchHHHHHHHhhcCceec
Q psy10669        245 TGGTD---------------VHLILIDLRKNKLTGSKVELVLEEIAIACN  279 (337)
Q Consensus       245 ~~~t~---------------~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~  279 (337)
                      ..+-.               ..++.+.+......+..+-+.|+..||.++
T Consensus       291 ~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~~l~~~~~~~s  340 (392)
T 3qhx_A          291 YPGLPSHPGHAVAARQMRGFGGMVSVRMRAGRTAAEQLCAKTNIFILAES  340 (392)
T ss_dssp             CTTSTTSTTHHHHHHHCSSCCSEEEEEETTCHHHHHHHHHHCSSSEECSC
T ss_pred             CCCCCCCCCHHHHHHhCCCCceEEEEEeCCcHHHHHHHHHhCCCceECCC
Confidence            22111               346777775421233334444444455554

>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}

Probab=98.90  E-value=1.9e-08  Score=98.89  Aligned_cols=188  Identities=13%  Similarity=0.080  Sum_probs=118.9

Q ss_pred             ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669         70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------  119 (337)
Q Consensus        70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------  119 (337)
                      ++...+++|    +++++++|.+.     .+.++||+.|+..++.+++++                              
T Consensus        80 ~~p~~~~le----~~lA~l~g~~~-----~v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~  150 (430)
T 3ri6_A           80 SNPTVEDLE----QRLKNLTGALG-----VLALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVR  150 (430)
T ss_dssp             CCHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTTCEEE
T ss_pred             CCHHHHHHH----HHHHHHHCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEE
Confidence            445567777    57889999875     688999999999888998765                              


Q ss_pred             ----------ccc---cccEEEEc-Ccc-cccccChHHHHHHhhhcCCeEEEeccccccccc-----e---eeee-cc--
Q psy10669        120 ----------NNA---RFDFLSSG-TTC-YSRCLDYARFRQICDETDSIMFADMSHISGLIA-----G---VKGV-TK--  173 (337)
Q Consensus       120 ----------~~a---~pklII~~-~S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----g---~~~T-~~--  173 (337)
                                +.+   ++++|++. .++ .+...|+++|.++|+++|++|++|++|..|...     |   ++++ +|  
T Consensus       151 ~v~~~d~~~l~~ai~~~t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD~a~~~~~~~~~~~~g~div~~S~sK~l  230 (430)
T 3ri6_A          151 FVDVMDSLAVEHACDETTKLLFLETISNPQLQVADLEALSKVVHAKGIPLVVDTTMTPPYLLEAKRLGVDIEVLSSTKFI  230 (430)
T ss_dssp             EECTTCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTSCTTTCCGGGGTCSEEEEECCCEE
T ss_pred             EeCCCCHHHHHHhhCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccCChHHcCCEEEEECCcccc
Confidence                      101   26777775 333 458889999999999999999999999988764     1   2222 22  


Q ss_pred             ------CCchhhh--h--H------------------HHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHH
Q psy10669        174 ------TGEKILY--D--Y------------------EEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQV  225 (337)
Q Consensus       174 ------~Gg~i~~--~--l------------------~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v  225 (337)
                            .||+++.  +  +                  ..++...... ..|+...+..|.++..  .+  .....+.++.
T Consensus       231 ~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~~~~~~~~~-~~g~~~~~~~a~l~l~--~l--~~l~~r~~~~  305 (430)
T 3ri6_A          231 SGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFLYKARKEVFQ-NLGPSLSPHNAYLQSL--GL--ETMALRIERS  305 (430)
T ss_dssp             ETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHHHHHHHTHHH-HHCCCCCHHHHHHHHH--HH--HHHHHHHHHH
T ss_pred             cCCCCceEEEEEECChHHhhhccchhhhhhhhchhhHHHHHHHHHHH-hcCCCCCHHHHHHHHh--hh--hhHHHHHHHH
Confidence                  4676662  1  2                  1111111111 1233333444443322  22  2345677888


Q ss_pred             HHHHHHHHHHHHh-CCCE-EecCCCCCe---------------EEEEEecCCCcchHHHHHHHhhcC
Q psy10669        226 KANASHLSDEMIK-RGYH-VVTGGTDVH---------------LILIDLRKNKLTGSKVELVLEEIA  275 (337)
Q Consensus       226 ~~na~~l~~~L~~-~G~~-v~~~~t~~h---------------~v~V~~~~~~~~~~~~~~~L~~~g  275 (337)
                      .+|++++++.|.+ .+++ |...+-.+|               ++.+.+.    +...+.+.++...
T Consensus       306 ~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~g~Gg~~lsf~l~----~~~~~~~~~~~l~  368 (430)
T 3ri6_A          306 CQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQFRYAGSILTFELE----SKEASYRFMDALK  368 (430)
T ss_dssp             HHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHCSSCCSEEEEECS----SHHHHHHHHHHCS
T ss_pred             HHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEEC----CHHHHHHHHHhCC
Confidence            9999999999987 4666 433332333               7777775    2344555566543

>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3

Probab=98.90  E-value=3.3e-08  Score=94.54  Aligned_cols=185  Identities=10%  Similarity=0.008  Sum_probs=120.3

Q ss_pred             HHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc--------------------------------------ccc-
Q psy10669         82 QQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT--------------------------------------NNA-  122 (337)
Q Consensus        82 ~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~--------------------------------------~~a-  122 (337)
                      ++++++++|.+.     .+.++||+.||..++.+++++                                      .+. 
T Consensus        58 ~~~la~~~~~~~-----~i~~~sGt~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~  132 (386)
T 1cs1_A           58 QRALAELEGGAG-----AVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQGDEQALRA  132 (386)
T ss_dssp             HHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEECTTCHHHHHH
T ss_pred             HHHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEecCCcHhHHHHHHHHHHhcCCEEEEeCCCCHHHHHH
Confidence            368899999873     688899999998888888654                                      000 


Q ss_pred             ----cccEEEEcCccc--ccccChHHHHHHhhhcCCeEEEeccccccccc--------eeeeeccC---------Cchhh
Q psy10669        123 ----RFDFLSSGTTCY--SRCLDYARFRQICDETDSIMFADMSHISGLIA--------GVKGVTKT---------GEKIL  179 (337)
Q Consensus       123 ----~pklII~~~S~~--~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~--------g~~~T~~~---------Gg~i~  179 (337)
                          ++++|++..-.+  +...|+++|.++|+++|+++++|++|..|...        .++++.+|         ||+++
T Consensus       133 ~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~di~~~s~sK~~~~~~~~~~G~~~  212 (386)
T 1cs1_A          133 ALAEKPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVVAGVVI  212 (386)
T ss_dssp             HHHTCCSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEE
T ss_pred             hhccCCcEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCCccccCceEEEEcCcccccCCCCceeEEEE
Confidence                267888763332  57889999999999999999999999987653        13333322         25555


Q ss_pred             h---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC-CEEe-cC--------
Q psy10669        180 Y---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG-YHVV-TG--------  246 (337)
Q Consensus       180 ~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G-~~v~-~~--------  246 (337)
                      .   ++.+.+.+...+. .+++++...++...++.     ...+..++..+|.+.+.+.|.+.+ +.-+ ..        
T Consensus       213 ~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~l~~~l~~~~~l~~~~~~~l~~~~~~  286 (386)
T 1cs1_A          213 AKDPDVVTELAWWANNI-GVTGGAFDSYLLLRGLR-----TLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGH  286 (386)
T ss_dssp             ESSHHHHHHHHHHHHHH-TCBCCHHHHHHHHHHHT-----THHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTH
T ss_pred             eCcHHHHHHHHHHHHhc-CCCCCHHHHHHHHhccc-----HHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCccH
Confidence            4   3666665443221 23344444333223322     245667788999999999998753 2211 11        


Q ss_pred             -------CCCCeEEEEEecCCCcchHHHHHHHhhcCceecc
Q psy10669        247 -------GTDVHLILIDLRKNKLTGSKVELVLEEIAIACNK  280 (337)
Q Consensus       247 -------~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~  280 (337)
                             .....++.+.+..   ....+.+.|++.||.+..
T Consensus       287 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~gi~~~~  324 (386)
T 1cs1_A          287 EIAARQQKGFGAMLSFELDG---DEQTLRRFLGGLSLFTLA  324 (386)
T ss_dssp             HHHHHHCSSCCSEEEEEESS---CHHHHHHHHHTCSSSEEB
T ss_pred             HHHHHhcCCCceEEEEEECC---CHHHHHHHHHhCCcceEc
Confidence                   0125677777653   256778889889998863

>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}

Probab=98.90  E-value=8.9e-08  Score=93.63  Aligned_cols=242  Identities=12%  Similarity=0.042  Sum_probs=143.8

Q ss_pred             cccceeeeccCCC--CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-
Q psy10669         29 QINGIELIASENF--TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-  105 (337)
Q Consensus        29 q~~~i~l~asen~--~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-  105 (337)
                      ....|+|...+.-  .+|.|.+++...+.. +.     ...|+...-..+++....+.+.+.+|.+.. . .+|.+++| 
T Consensus        56 ~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~-~~-----~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~-~-~~v~~t~G~  127 (447)
T 3b46_A           56 GRELINLGQGFFSYSPPQFAIKEAQKALDI-PM-----VNQYSPTRGRPSLINSLIKLYSPIYNTELK-A-ENVTVTTGA  127 (447)
T ss_dssp             TSCCEECCCCSCSSCCCHHHHHHHHHHTTS-GG-----GGSCCCTTCCHHHHHHHHHHHTTTTTSCCC-G-GGEEEESHH
T ss_pred             CCCeEEccCCCCCCCCCHHHHHHHHHHHhC-cC-----CCCCCCCCCCHHHHHHHHHHHHHhcCCCCC-h-hhEEEeCCH
Confidence            3456777665533  379999998776542 11     011211111234543333455566675321 0 24777777 


Q ss_pred             chhHHHHHHhhCCc--------------------------------c-------------c------c-----cccEEEE
Q psy10669        106 SPANFAVCEKALPT--------------------------------N-------------N------A-----RFDFLSS  129 (337)
Q Consensus       106 t~AN~~v~~aLl~~--------------------------------~-------------~------a-----~pklII~  129 (337)
                      +.|+..++.+++++                                .             .      .     ++++|++
T Consensus       128 ~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l  207 (447)
T 3b46_A          128 NEGILSCLMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSKTKAVII  207 (447)
T ss_dssp             HHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCCTTEEEEEE
T ss_pred             HHHHHHHHHHHcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeCCCccccccccccccCcccCHHHHHHhhccCCeEEEE
Confidence            78998888988754                                1             0      0     1577776


Q ss_pred             cCccc--ccc---cChHHHHHHhhhcCCeEEEeccccccccc-----------------eeeeec-c----CC---chhh
Q psy10669        130 GTTCY--SRC---LDYARFRQICDETDSIMFADMSHISGLIA-----------------GVKGVT-K----TG---EKIL  179 (337)
Q Consensus       130 ~~S~~--~~~---~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----------------g~~~T~-~----~G---g~i~  179 (337)
                      ..-.+  +..   .++++|.++|+++|+++++|++|......                 .+.++. |    .|   |+++
T Consensus       208 ~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~riG~~~  287 (447)
T 3b46_A          208 NTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTVGSAGKSFAATGWRIGWVL  287 (447)
T ss_dssp             ESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHHHHTTEEEEEEHHHHTTCTTSCCEEEE
T ss_pred             eCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCCCCcCHHHcCCCCCCcEEEEecCchhcCCcchhhEEEE
Confidence            42222  344   36778889999999999999999753221                 112222 2    23   5554


Q ss_pred             h---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHh-chhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEE
Q psy10669        180 Y---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQ-SDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILI  255 (337)
Q Consensus       180 ~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~-~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V  255 (337)
                      .   ++.+.+..... ....+++++..++++.++.... +...++.++++.++.++|.+.|.+.|+++.. ...+..+++
T Consensus       288 ~~~~~l~~~l~~~~~-~~~~~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~g~~~~~  365 (447)
T 3b46_A          288 SLNAELLSYAAKAHT-RICFASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFTSIFDELGLPYTA-PEGTYFVLV  365 (447)
T ss_dssp             CSCHHHHHHHHHHHH-HHTSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHTCCEEC-CSBSSEEEE
T ss_pred             eCCHHHHHHHHHHHh-hccCCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHCCCeecC-CCeeEEEEE
Confidence            4   45555443211 1122456667777777776542 2235678888999999999999998998764 233566778


Q ss_pred             EecCC--------------CcchHHHHHHHh-hcCceecc
Q psy10669        256 DLRKN--------------KLTGSKVELVLE-EIAIACNK  280 (337)
Q Consensus       256 ~~~~~--------------~~~~~~~~~~L~-~~gI~v~~  280 (337)
                      ++...              +.+..++.+.|. +.||.+.+
T Consensus       366 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~p  405 (447)
T 3b46_A          366 DFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIP  405 (447)
T ss_dssp             ECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBC
T ss_pred             ecccccCccccccccccccCCCHHHHHHHHHHhCCEEEEC
Confidence            87642              234556666664 68999875

>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*

Probab=98.90  E-value=1.3e-08  Score=100.40  Aligned_cols=186  Identities=16%  Similarity=0.135  Sum_probs=116.8

Q ss_pred             cchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc-------------------------------
Q psy10669         71 NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT-------------------------------  119 (337)
Q Consensus        71 ~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~-------------------------------  119 (337)
                      +...+++|    +++++++|.+.     .+.++||+.|+..++.+++++                               
T Consensus       113 ~~~~~~l~----~~lA~l~g~~~-----~v~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~  183 (445)
T 1qgn_A          113 NPTTVVLE----EKISALEGAES-----TLLMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATV  183 (445)
T ss_dssp             CHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEE
T ss_pred             ChHHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEE
Confidence            34455665    68899999874     699999999998888988764                               


Q ss_pred             -------cc--c---cc-cEEEEcCcc--cccccChHHHHHHhhhcCCeEEEeccccccccc--------eeeee-cc--
Q psy10669        120 -------NN--A---RF-DFLSSGTTC--YSRCLDYARFRQICDETDSIMFADMSHISGLIA--------GVKGV-TK--  173 (337)
Q Consensus       120 -------~~--a---~p-klII~~~S~--~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~--------g~~~T-~~--  173 (337)
                             .+  +   ++ ++|++..-+  .+...|+++|.++|+++|+++++|++|..|...        .++++ +|  
T Consensus       184 v~~~d~~~l~~ai~~~tv~lV~le~p~NptG~v~dl~~I~~la~~~g~~livD~a~~~~~~~~~~~~g~Div~~S~sK~~  263 (445)
T 1qgn_A          184 IDPADVGALELALNQKKVNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFATPLNQKALALGADLVLHSATKFL  263 (445)
T ss_dssp             ECSSCHHHHHHHHHHSCEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCTTTTTCSEEEECTTTTT
T ss_pred             eCCCCHHHHHHHhccCCCCEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCCccccCCEEEEECCcccc
Confidence                   00  1   25 888876333  358889999999999999999999999988654        13333 22  


Q ss_pred             ---C---Cchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CC-EE
Q psy10669        174 ---T---GEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GY-HV  243 (337)
Q Consensus       174 ---~---Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~-~v  243 (337)
                         .   +|+++.  ++.+.+...... ..+++++.....+..+   +  .....+.++..+|++++++.|.+. ++ .+
T Consensus       264 gg~gd~~~G~l~~~~~l~~~l~~~~~~-~g~~~~~~~a~~~~~~---l--~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v  337 (445)
T 1qgn_A          264 GGHNDVLAGCISGPLKLVSEIRNLHHI-LGGALNPNAAYLIIRG---M--KTLHLRVQQQNSTALRMAEILEAHPKVRHV  337 (445)
T ss_dssp             TCSSSCCCEEEEECHHHHHHHHHHHHH-HCCCCCHHHHHHHHHH---G--GGHHHHHHHHHHHHHHHHHHHHTCTTEEEE
T ss_pred             cccccceEEEEEECHHHHHHHHHHHHH-hCCCCCHHHHHHHHHh---H--HHHHHHHHHHHHHHHHHHHHHhcCCCceEE
Confidence               1   566654  455555432211 1122333322222222   2  234566788889999999999985 45 44


Q ss_pred             ecCC---------------CCCeEEEEEecCCCcchHHHHHHHhhc
Q psy10669        244 VTGG---------------TDVHLILIDLRKNKLTGSKVELVLEEI  274 (337)
Q Consensus       244 ~~~~---------------t~~h~v~V~~~~~~~~~~~~~~~L~~~  274 (337)
                      ...+               ....++.+.+..   ....+.+.++..
T Consensus       338 ~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~---~~~~~~~~l~~l  380 (445)
T 1qgn_A          338 YYPGLQSHPEHHIAKKQMTGFGGAVSFEVDG---DLLTTAKFVDAL  380 (445)
T ss_dssp             ECTTSSSSTTHHHHHHHCSCCCSEEEEEESS---CHHHHHHHHHHC
T ss_pred             ECCCCCCCchHHHHHHhccCCCcEEEEEECC---CHHHHHHHHHhC
Confidence            4321               135677777753   223455556553

>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*

Probab=98.88  E-value=1.1e-07  Score=93.85  Aligned_cols=160  Identities=11%  Similarity=0.074  Sum_probs=98.5

Q ss_pred             ccEEEEcCccc---ccccC----hHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeecc--CCch----
Q psy10669        124 FDFLSSGTTCY---SRCLD----YARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTK--TGEK----  177 (337)
Q Consensus       124 pklII~~~S~~---~~~~d----~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~--~Gg~----  177 (337)
                      +++||+.+...   ++..+    +++|+++|+++|++||+|++|+ .|-.+        +    +.+..|  .||+    
T Consensus       234 ~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~~a~~~~~~~pdiit~sK~l~gG~~~lG  313 (457)
T 3tfu_A          234 LAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALFAADHAGVSPDIMCVGKALTGGYLSLA  313 (457)
T ss_dssp             EEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECGGGGTTSSCCE
T ss_pred             EEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccchhHhHhcCCCceEEEEChhhhCCCcceE
Confidence            36777765132   22332    7889999999999999999986 33222        1    121112  1343    


Q ss_pred             -hhh--hHHHHHhh---c-cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC----CCEEecC
Q psy10669        178 -ILY--DYEEKINN---A-VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR----GYHVVTG  246 (337)
Q Consensus       178 -i~~--~l~~~i~~---~-~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~----G~~v~~~  246 (337)
                       +++  ++.+.+..   . ..-+..-+.++...++..+++..+.+   +++.+++.++.++|.+.|.+.    ++..+. 
T Consensus       314 ~v~~~~~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aaL~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~v~~vr-  389 (457)
T 3tfu_A          314 ATLCTADVAHTISAGAAGALMHGPTFMANPLACAVSVASVELLLG---QDWRTRITELAAGLTAGLDTARALPAVTDVR-  389 (457)
T ss_dssp             EEEEEHHHHHHHHHSSSCSCCCCCTTTTCHHHHHHHHHHHHHHHT---SCHHHHHHHHHHHHHHHHGGGGGSTTEEEEE-
T ss_pred             EEEEcHHHHHHhhccCCCceeEecCCCcCHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHHhcCCCeeeee-
Confidence             333  56666641   1 11122234566677776666666533   367888999999999999874    232222 


Q ss_pred             CCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCc-ccchhhh
Q psy10669        247 GTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT-GISLAAE  289 (337)
Q Consensus       247 ~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~-girig~~  289 (337)
                       ....++.+.+... .+..++.+.|.+.||.+.+.. .+||..+
T Consensus       390 -~~G~~~~i~l~~~-~~~~~~~~~l~~~Gv~v~~~~~~lRi~p~  431 (457)
T 3tfu_A          390 -VCGAIGVIECDRP-VDLAVATPAALDRGVWLRPFRNLVYAMPP  431 (457)
T ss_dssp             -ECSSCEEEEESSC-CCHHHHHHHHHHTTEECCCBTTEEEECCC
T ss_pred             -cCCeEEEEEECCc-ccHHHHHHHHHHCCeEEEecCCEEEEECC
Confidence             2455777887654 357788888888899998644 6776543

>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*

Probab=98.87  E-value=3.5e-08  Score=95.57  Aligned_cols=192  Identities=15%  Similarity=0.075  Sum_probs=123.6

Q ss_pred             ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669         70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------  119 (337)
Q Consensus        70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------  119 (337)
                      |+...++++    +.+++++|.+.     .+.++||+.|+..++.+++++                              
T Consensus        60 ~~~~~~~l~----~~ia~~~g~~~-----~i~~~~g~~ai~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~  130 (404)
T 1e5e_A           60 GNPTVSNLE----GKIAFLEKTEA-----CVATSSGMGAIAATVLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVD  130 (404)
T ss_dssp             CCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEE
T ss_pred             cChHHHHHH----HHHHHHhCCCc-----EEEeCChHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEE
Confidence            445556666    57889999863     588899999998888888754                              


Q ss_pred             --------cc--c---cccEEEEc-Ccc-cccccChHHHHHHhhh-cCCeEEEeccccccccc--------eeeeec-c-
Q psy10669        120 --------NN--A---RFDFLSSG-TTC-YSRCLDYARFRQICDE-TDSIMFADMSHISGLIA--------GVKGVT-K-  173 (337)
Q Consensus       120 --------~~--a---~pklII~~-~S~-~~~~~d~~~l~eia~~-~ga~l~vD~AH~~Gli~--------g~~~T~-~-  173 (337)
                              .+  +   ++|+|++. +++ .+...|+++|.++|++ +|+++++|++|..+...        .++.+. | 
T Consensus       131 ~v~~~d~~~l~~~i~~~t~~v~l~~p~NptG~v~~l~~i~~la~~~~~~~li~De~~~~~~~~~~~~~~~di~~~S~sK~  210 (404)
T 1e5e_A          131 FINTAIPGEVKKHMKPNTKIVYFETPANPTLKIIDMERVCKDAHSQEGVLVIADNTFCSPMITNPVDFGVDVVVHSATKY  210 (404)
T ss_dssp             EECTTSTTHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHTSTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTT
T ss_pred             EECCCCHHHHHHhcCCCCcEEEEECCCCCCCcccCHHHHHHHHHhhcCCEEEEECCCchhhhCCccccCCEEEEEcCccc
Confidence                    00  0   25777775 333 3588899999999999 99999999999987742        123332 2 


Q ss_pred             ----C---Cchhhh--hHHH-HHhhccCCCC-CCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC-C
Q psy10669        174 ----T---GEKILY--DYEE-KINNAVFPSL-QGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG-Y  241 (337)
Q Consensus       174 ----~---Gg~i~~--~l~~-~i~~~~~p~~-~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G-~  241 (337)
                          .   ||+++.  ++.+ .+.+... .. .++.++...++...++.     ..+.+.++..+|++.+++.|.+.. +
T Consensus       211 ~~~~g~ri~G~~~~~~~~~~~~l~~~~~-~~~g~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~l~~~l~~~~~v  284 (404)
T 1e5e_A          211 INGHTDVVAGLICGKADLLQQIRMVGIK-DITGSVISPHDAWLITRGLS-----TLNIRMKAESENAMKVAEYLKSHPAV  284 (404)
T ss_dssp             TTCSSCCCCEEEEECHHHHHHHHHTCCC-CCCCCCCCHHHHHHHHHHHT-----THHHHHHHHHHHHHHHHHHHHTCTTE
T ss_pred             cCCCCCCeEEEEEECHHHHHHHHHHHHH-hCCCCCCCHHHHHHHHHhHh-----HHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence                1   466655  4544 6665533 33 23445444444333432     235667788899999999998763 2


Q ss_pred             E-EecCC---------------CCCeEEEEEecCCCcchHHHHHHHhhcCceec
Q psy10669        242 H-VVTGG---------------TDVHLILIDLRKNKLTGSKVELVLEEIAIACN  279 (337)
Q Consensus       242 ~-v~~~~---------------t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~  279 (337)
                      . +....               ....++.+++..   ....+.+.|++.||.+.
T Consensus       285 ~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~l~~~~i~~~  335 (404)
T 1e5e_A          285 EKVYYPGFEDHEGHDIAKKQMRMYGSMITFILKS---GFEGAKKLLDNLKLITL  335 (404)
T ss_dssp             EEEECTTCSSSTTHHHHHHHCSSCCSEEEEEETT---HHHHHHHHHHTCSSSEE
T ss_pred             eEEECCCCCCCccHHHHHhhCCCCceEEEEEeCC---CHHHHHHHHHhCCCcee
Confidence            1 11110               125566667653   23557788888898555

>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1

Probab=98.87  E-value=5.5e-08  Score=93.52  Aligned_cols=241  Identities=17%  Similarity=0.144  Sum_probs=141.7

Q ss_pred             cceeeeccC-----C-CCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcC------------CC
Q psy10669         31 NGIELIASE-----N-FTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFN------------LD   92 (337)
Q Consensus        31 ~~i~l~ase-----n-~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg------------~~   92 (337)
                      ..|.|...+     + ..+|.|.+++...+......+      |.-.....+++    +.++++++            .+
T Consensus        34 ~~i~l~~g~p~~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~~~~~lr----~~la~~~~~~~~~~~~~~~~~~  103 (416)
T 1bw0_A           34 PIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNG------YFPTVGSPEAR----EAVATWWRNSFVHKEELKSTIV  103 (416)
T ss_dssp             CCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSS------CCCTTCCHHHH----HHHHHHHHHHHCCSTTTGGGCC
T ss_pred             CeEEecCcCCCcccCCCCCHHHHHHHHHHhhCCccCC------cCCCCCCHHHH----HHHHHHHHhhhcccccCCCCCC
Confidence            346665543     2 348999999987654311111      21111223444    34455555            33


Q ss_pred             CCCCcceeecCCC-chhHHHHHHhhCCc--------------------------------c---------c--c---ccc
Q psy10669         93 PEQWGCNVQPYSG-SPANFAVCEKALPT--------------------------------N---------N--A---RFD  125 (337)
Q Consensus        93 ~~~~~~~v~~~Sg-t~AN~~v~~aLl~~--------------------------------~---------~--a---~pk  125 (337)
                      .    -+|.+++| +.|+..++.+++++                                +         +  +   +++
T Consensus       104 ~----~~v~~~~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~  179 (416)
T 1bw0_A          104 K----DNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKDDKTK  179 (416)
T ss_dssp             G----GGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTTEE
T ss_pred             c----ceEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCcHhHHHHHHHcCcEEEEeecCcccCCCCCHHHHHHHhccCCe
Confidence            3    25777676 67888888888754                                0         0  0   145


Q ss_pred             EEEEc-Ccc-cccccC---hHHHHHHhhhcCCeEEEeccccc----cc-----c-c----------eeeeeccC------
Q psy10669        126 FLSSG-TTC-YSRCLD---YARFRQICDETDSIMFADMSHIS----GL-----I-A----------GVKGVTKT------  174 (337)
Q Consensus       126 lII~~-~S~-~~~~~d---~~~l~eia~~~ga~l~vD~AH~~----Gl-----i-~----------g~~~T~~~------  174 (337)
                      +|++. +++ .+...|   +++|.++|+++|+++++|++|..    |-     . .          .+++|..|      
T Consensus       180 ~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G  259 (416)
T 1bw0_A          180 LLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVVPG  259 (416)
T ss_dssp             EEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTTTTSCGG
T ss_pred             EEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHHccCCCcEEEEecchhhCCCCC
Confidence            55554 433 246677   77888999999999999999986    21     1 1          01233322      


Q ss_pred             --Cchhhh-h---HHH----HHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEE
Q psy10669        175 --GEKILY-D---YEE----KINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHV  243 (337)
Q Consensus       175 --Gg~i~~-~---l~~----~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v  243 (337)
                        .|+++. +   +.+    .+....  ....++++...+++..++.......+++.++++.++.++|.+.|.+. |+++
T Consensus       260 lr~G~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~  337 (416)
T 1bw0_A          260 WRLGWLLYVDPHGNGPSFLEGLKRVG--MLVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIGECIGLAP  337 (416)
T ss_dssp             GCCEEEEEECTTCSCHHHHHHHHHHH--HHHTCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHTTSTTEEE
T ss_pred             ceEEEEEeeCchhhHHHHHHHHHHHh--ccccCCCcHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence              245543 2   222    222110  01235677777777777654323345778889999999999999885 8887


Q ss_pred             ecCCCCCeEEEEEecCC----CcchHHHHHHH-hhcCceeccCc------ccchhh
Q psy10669        244 VTGGTDVHLILIDLRKN----KLTGSKVELVL-EEIAIACNKNT------GISLAA  288 (337)
Q Consensus       244 ~~~~t~~h~v~V~~~~~----~~~~~~~~~~L-~~~gI~v~~~~------girig~  288 (337)
                      ..+ ..+..+++.+...    ..+..++...| ++.||.+.+..      .+||+.
T Consensus       338 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~iRis~  392 (416)
T 1bw0_A          338 TMP-RGAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTT  392 (416)
T ss_dssp             CCC-CBTTEEEEEECGGGBSSCCSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEEC
T ss_pred             cCC-CeeEEEEEeCCHHHcCCCCCHHHHHHHHHHHCCEEEecccccCCCCeEEEEe
Confidence            642 3344566766431    13566666666 67899997632      477765

>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*

Probab=98.87  E-value=2.1e-08  Score=96.54  Aligned_cols=226  Identities=12%  Similarity=0.030  Sum_probs=134.0

Q ss_pred             ceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHH
Q psy10669         32 GIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFA  111 (337)
Q Consensus        32 ~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~  111 (337)
                      ...+..|..|..+...+ +...+... ..++.-+|+  ++....++|    +++++++|.+.     .+.++||+.|+..
T Consensus        23 ~~pi~~~~~~~~~~~~~-~~~~~~~~-~~~~~y~~~--~~~~~~~l~----~~la~~~g~~~-----~i~~~sG~~ai~~   89 (389)
T 3acz_A           23 AYPIFQTSTFCFDSTQQ-GADLFMGK-GEGHIYSRL--GNPTVEQFE----EMVCSIEGAAG-----SAAFGSGMGAISS   89 (389)
T ss_dssp             SCCBCCCSBBCCSSHHH-HHHHHTTC-SSCCCBTTT--CCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHH
T ss_pred             CCCcccCCceecCChHH-HHHhhcCC-CCCcccCCC--CChHHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHH
Confidence            34566666776433322 11122211 123322332  344455666    58889999874     6888999999998


Q ss_pred             HHHhhCCc----------------------------------------ccc---cccEEEEcCcc--cccccChHHHHHH
Q psy10669        112 VCEKALPT----------------------------------------NNA---RFDFLSSGTTC--YSRCLDYARFRQI  146 (337)
Q Consensus       112 v~~aLl~~----------------------------------------~~a---~pklII~~~S~--~~~~~d~~~l~ei  146 (337)
                      ++.+++++                                        +.+   ++++|++..-+  .+...|+++|.++
T Consensus        90 ~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~~  169 (389)
T 3acz_A           90 STLAFLQKGDHLIAGDTLYGCTVSLFTHWLPRFGIEVDLIDTSDVEKVKAAWKPNTKMVYLESPANPTCKVSDIKGIAVV  169 (389)
T ss_dssp             HHTTTCCTTCEEEEESSCCHHHHHHHHHHHHHTTCEEEEECTTCHHHHHHTCCTTEEEEEEESSCTTTCCCCCHHHHHHH
T ss_pred             HHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCCCCeEEEEECCCCCCCeecCHHHHHHH
Confidence            88888654                                        001   25788775333  3578899999999


Q ss_pred             hhhcCCeEEEeccccccccc--------eeeeec-c-----C---Cchhhh---hHHHHHhhccCCCCCCCCcHHHHHHH
Q psy10669        147 CDETDSIMFADMSHISGLIA--------GVKGVT-K-----T---GEKILY---DYEEKINNAVFPSLQGGPHNHAIGAI  206 (337)
Q Consensus       147 a~~~ga~l~vD~AH~~Gli~--------g~~~T~-~-----~---Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaal  206 (337)
                      |+++|+++++|++|..|...        .++.+. |     .   ||+++.   ++.+.+.+...+ ..+++++...++.
T Consensus       170 ~~~~~~~livD~~~~~~~~~~~~~~~~di~~~S~sK~~~~~~~~~~G~v~~~~~~~~~~l~~~~~~-~g~~~~~~~~~~~  248 (389)
T 3acz_A          170 CHERGARLVVDATFTSPCFLKPLELGADIALHSVSKYINGHGDVIGGVSSAKTAEDIATIKFYRKD-AGSLMAPMDAFLC  248 (389)
T ss_dssp             HHHHTCEEEEECTTTCTTTCCGGGTTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHH-HCCCCCHHHHHHH
T ss_pred             HHHcCCEEEEECCCccccccCccccCCeEEEECChhhccCCCCceeEEEEECcHHHHHHHHHHHHh-cCCCCCHHHHHHH
Confidence            99999999999999988743        233332 3     1   466654   455555543221 1222333222222


Q ss_pred             HHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCC-E-EecCC---------------CCCeEEEEEecCCCcchHHHHH
Q psy10669        207 ATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGY-H-VVTGG---------------TDVHLILIDLRKNKLTGSKVEL  269 (337)
Q Consensus       207 a~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~-~-v~~~~---------------t~~h~v~V~~~~~~~~~~~~~~  269 (337)
                      ..++     ...+.+.++..+|++.+++.|.+.+. . +...+               ....++.+.+.  +  ...+.+
T Consensus       249 ~~~l-----~~l~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~~l~--~--~~~~~~  319 (389)
T 3acz_A          249 ARGM-----KTLPIRMQIHMENGLKVAKFLEQHEKIVKVNHPGLESFPGHDIAKKQMTGYGSTFLFEMK--S--FEAAKK  319 (389)
T ss_dssp             HHHH-----TTHHHHHHHHHHHHHHHHHHHHHCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEES--S--HHHHHH
T ss_pred             HcCc-----cHHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCeEEEEEEC--C--HHHHHH
Confidence            2222     13456678888999999999988531 1 11110               12456666664  2  567788


Q ss_pred             HHhhcCceecc
Q psy10669        270 VLEEIAIACNK  280 (337)
Q Consensus       270 ~L~~~gI~v~~  280 (337)
                      .|++.||.+..
T Consensus       320 ~l~~~~i~~~~  330 (389)
T 3acz_A          320 LMEHLKVCTLA  330 (389)
T ss_dssp             HHTTCSSSEEB
T ss_pred             HHHhCCCcEEC
Confidence            88888988764

>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*

Probab=98.86  E-value=5.5e-08  Score=95.49  Aligned_cols=227  Identities=9%  Similarity=-0.007  Sum_probs=131.7

Q ss_pred             CCHHHHHHHhhhhhhcc--CCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHhhCC
Q psy10669         42 TSLAVLECLGSCLQNKY--SEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEKALP  118 (337)
Q Consensus        42 ~~p~V~~a~~~~l~~~y--~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~aLl~  118 (337)
                      .++.+.+++...+.+..  ..+|+.      ..-..+++....+.+.+.+|.+ +.  .+|.+++| ++|+..++.++++
T Consensus        92 p~~~v~~a~~~~l~~~~~~~~~Y~~------~~g~~~lr~~ia~~~~~~~g~~-~~--~~v~~t~G~~~al~~~~~~l~~  162 (448)
T 3aow_A           92 PKEIIRDILVEIMEKYADKALQYGT------TKGFTPLRETLMKWLGKRYGIS-QD--NDIMITSGSQQALDLIGRVFLN  162 (448)
T ss_dssp             CHHHHHHHHHHHHHHSHHHHHSCCC------TTCCHHHHHHHHHHHHHHHCCC-TT--SEEEEESSHHHHHHHHHHHHCC
T ss_pred             CHHHHHHHHHHHHHhhhHHHhCCCC------CCCcHHHHHHHHHHHHHhcCcC-Ch--hhEEEeCcHHHHHHHHHHHHcC
Confidence            36778888876544310  012211      1112344432233444445873 11  26777777 6788888888876


Q ss_pred             c------------------------------------------cc-----c--cccEEEEcC--cc-cccccC---hHHH
Q psy10669        119 T------------------------------------------NN-----A--RFDFLSSGT--TC-YSRCLD---YARF  143 (337)
Q Consensus       119 ~------------------------------------------~~-----a--~pklII~~~--S~-~~~~~d---~~~l  143 (337)
                      +                                          .+     .  +||+|++-+  .+ .+...+   +++|
T Consensus       163 ~Gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~g~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i  242 (448)
T 3aow_A          163 PGDIVVVEAPTYLAALQAFNFYEPQYIQIPLDDEGMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYL  242 (448)
T ss_dssp             TTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETTEECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHH
T ss_pred             CCCEEEEeCCChHHHHHHHHHcCCEEEEeccCCCCCCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHH
Confidence            4                                          11     2  367774422  12 244555   4567


Q ss_pred             HHHhhhcCCeEEEeccccccccce----------------eeeeccC----C---chhhh--hHHHHHhhccCCCCCCCC
Q psy10669        144 RQICDETDSIMFADMSHISGLIAG----------------VKGVTKT----G---EKILY--DYEEKINNAVFPSLQGGP  198 (337)
Q Consensus       144 ~eia~~~ga~l~vD~AH~~Gli~g----------------~~~T~~~----G---g~i~~--~l~~~i~~~~~p~~~g~~  198 (337)
                      .++|+++|+++++|++|..+...|                ..+|..|    |   |+++.  ++.+.+.....+..+ ++
T Consensus       243 ~~la~~~~~~lI~De~y~~~~~~g~~~~~~~~~~~~~~vi~~~S~SK~~~~GlriG~v~~~~~l~~~l~~~~~~~~~-~~  321 (448)
T 3aow_A          243 LELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILAPGFRIGWMVGDPGIIRKMEIAKQSTDL-CT  321 (448)
T ss_dssp             HHHHHHHTCEEEEECSCTTCBCSSCCCCCTGGGCTTSCEEEEEESTTTTCGGGCCEEEEECHHHHHHHHHHHHHHHS-SC
T ss_pred             HHHHHHcCCEEEEECCCccccCCCCCCcCHHhcCCCCCEEEEccchhhccccccEEEEEeCHHHHHHHHHHHHHhcC-CC
Confidence            789999999999999998754321                2233322    3   66654  465555433222223 34


Q ss_pred             cHHHHHHHHHHHHHH-hchhhHHHHHHHHHHHHHHHHHHHhC---CCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhc
Q psy10669        199 HNHAIGAIATAMLQA-QSDEFKSYQAQVKANASHLSDEMIKR---GYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEI  274 (337)
Q Consensus       199 ~~~~iaala~a~~e~-~~~~~~~y~~~v~~na~~l~~~L~~~---G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~  274 (337)
                      ++...+++..++... .....++.+++..++.++|.+.|.+.   |+++..+ .....+++.+.. +.+..++.+.|.+.
T Consensus       322 ~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~p-~~g~~~~v~~~~-~~~~~~l~~~l~~~  399 (448)
T 3aow_A          322 NVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMPEGVKWTKP-EGGMFIWVTLPD-GIDSKKMLERAIKK  399 (448)
T ss_dssp             CHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEECCC-SBSSEEEEECST-TCCHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEeCC-CccEEEEEEcCC-CCCHHHHHHHHHHC
Confidence            555555555555431 01223556677778999999999874   7887542 335577888854 45677777777777


Q ss_pred             Cceecc
Q psy10669        275 AIACNK  280 (337)
Q Consensus       275 gI~v~~  280 (337)
                      ||.+.+
T Consensus       400 gV~v~p  405 (448)
T 3aow_A          400 GVAYVP  405 (448)
T ss_dssp             TEECEE
T ss_pred             CcEEEc
Confidence            999875

>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*

Probab=98.86  E-value=8e-08  Score=93.37  Aligned_cols=156  Identities=11%  Similarity=0.102  Sum_probs=92.5

Q ss_pred             ccEEEEcCcccc---cccC----hHHHHHHhhhcCCeEEEeccccccc--cc--------e----eeeecc--CC----c
Q psy10669        124 FDFLSSGTTCYS---RCLD----YARFRQICDETDSIMFADMSHISGL--IA--------G----VKGVTK--TG----E  176 (337)
Q Consensus       124 pklII~~~S~~~---~~~d----~~~l~eia~~~ga~l~vD~AH~~Gl--i~--------g----~~~T~~--~G----g  176 (337)
                      +++|++.+ +++   ...+    +++|.++|+++|++|++|++|+ |+  .+        +    +.+..|  .+    |
T Consensus       202 ~~~vi~~p-~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~-g~g~~g~~~~~~~~~~~~di~s~sK~~~~G~riG  279 (439)
T 3dxv_A          202 IGAAFIEP-IQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKV-GLARSGRLHCFEHEGFVPDILVLGKGLGGGLPLS  279 (439)
T ss_dssp             EEEEEECS-SBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT-CTTTTSSSSGGGGTTCCCSEEEECGGGGTTSCCE
T ss_pred             EEEEEEcc-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCchhhHHHhcCCCCCEEEEcchhcCCcceE
Confidence            35777764 443   3444    7889999999999999999997 43  11        1    121112  12    4


Q ss_pred             hhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC----C-CEEecCCCC
Q psy10669        177 KILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR----G-YHVVTGGTD  249 (337)
Q Consensus       177 ~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~----G-~~v~~~~t~  249 (337)
                      +++.  ++.+.+.+......+  .++...++...++..+.+   +++.+++.++.+++.+.|.+.    + +..+.  ..
T Consensus       280 ~~~~~~~~~~~~~~~~~~~t~--~~~~~~~aa~aal~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~  352 (439)
T 3dxv_A          280 AVIAPAEILDCASAFAMQTLH--GNPISAAAGLAVLETIDR---DDLPAMAERKGRLLRDGLSELAKRHPLIGDIR--GR  352 (439)
T ss_dssp             EEEEEHHHHTSCSSSSCCTTT--TCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEE--EE
T ss_pred             EEEECHHHHhhhcCCCcCCCc--ccHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEE--EE
Confidence            4443  455555443222222  556666666666665532   467888888999998888763    2 22222  23


Q ss_pred             CeEEEEEecC-------CCcchHHHHHHHhhcCceeccCc----ccchhh
Q psy10669        250 VHLILIDLRK-------NKLTGSKVELVLEEIAIACNKNT----GISLAA  288 (337)
Q Consensus       250 ~h~v~V~~~~-------~~~~~~~~~~~L~~~gI~v~~~~----girig~  288 (337)
                      ..++.+++..       .+....++.+.|.+.||.+.+..    .+||..
T Consensus       353 g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~~  402 (439)
T 3dxv_A          353 GLACGMELVCDRQSREPARAETAKLIYRAYQLGLVVYYVGMNGNVLEFTP  402 (439)
T ss_dssp             TTEEEEEEEEETTTTEECHHHHHHHHHHHHHHTEECEEESTTSCEEEECC
T ss_pred             EEEEEEEEecCccccCCCHHHHHHHHHHHHHCCcEEeecCCCCCEEEEEC
Confidence            4466666631       22235566677777799987532    577753

>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2

Probab=98.86  E-value=5.1e-08  Score=95.31  Aligned_cols=153  Identities=13%  Similarity=0.177  Sum_probs=95.2

Q ss_pred             ccEEEEcCccc---ccc---cChHHHHHHhhhcCCeEEEeccccc-----------cccc---------------eeeee
Q psy10669        124 FDFLSSGTTCY---SRC---LDYARFRQICDETDSIMFADMSHIS-----------GLIA---------------GVKGV  171 (337)
Q Consensus       124 pklII~~~S~~---~~~---~d~~~l~eia~~~ga~l~vD~AH~~-----------Gli~---------------g~~~T  171 (337)
                      +++|++....+   +..   .++++|.++|+++|++|++|++|..           |..+               .++++
T Consensus       184 ~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~s  263 (467)
T 1ax4_A          184 IVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYADALTMS  263 (467)
T ss_dssp             EEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCSEEEEE
T ss_pred             eeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCchhhhhhhhccccceEEEe
Confidence            35777753332   233   3456788999999999999999876           2211               12223


Q ss_pred             c-c-----CCchhhh----hHHHHHhhc--cCCC--CCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHH
Q psy10669        172 T-K-----TGEKILY----DYEEKINNA--VFPS--LQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMI  237 (337)
Q Consensus       172 ~-~-----~Gg~i~~----~l~~~i~~~--~~p~--~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~  237 (337)
                      . |     .||+++.    ++.+.+...  .+++  ..++.....+++++.++.++.+   +++.++..++.++|.+.|.
T Consensus       264 ~sK~~g~~~Gg~~~~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~L~  340 (467)
T 1ax4_A          264 AKKDPLLNIGGLVAIRDNEEIFTLARQRCVPMEGFVTYGGLAGRDMAAMVQGLEEGTE---EEYLHYRIGQVKYLGDRLR  340 (467)
T ss_dssp             TTSTTCCSSCEEEEESSCHHHHHHHHHHHHHHTCSTTTTTCCHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHHHH
T ss_pred             ccccCCCCcceEEEeCCHHHHHHHHHhhccccccccccCCccchHHHHHHHHHHHhhh---hhHHHHHHHHHHHHHHHHH
Confidence            2 2     3676653    454443321  0122  2345555666666666666532   2345556688999999999


Q ss_pred             hCCCEEecCCCCCeEEEEE-------ecCCCcchHHHHHHH-hhcCceecc
Q psy10669        238 KRGYHVVTGGTDVHLILID-------LRKNKLTGSKVELVL-EEIAIACNK  280 (337)
Q Consensus       238 ~~G~~v~~~~t~~h~v~V~-------~~~~~~~~~~~~~~L-~~~gI~v~~  280 (337)
                      +.|+++.. ...++.++++       +...+.+..++.+.| ++.||.+.+
T Consensus       341 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~  390 (467)
T 1ax4_A          341 EAGIPIQY-PTGGHAVFVDCKKLVPQIPGDQFPAQAVINALYLESGVRAVE  390 (467)
T ss_dssp             HTTCCBCS-SCCSSEEEEESTTTCTTSCGGGCHHHHHHHHHHHHHCEECEE
T ss_pred             hCCCCccc-CCCceEEEEehhhhccccccCCCCHHHHHHHHHHhcCceeee
Confidence            98888763 3456778887       432344567788888 888999875

>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}

Probab=98.85  E-value=1.9e-07  Score=92.44  Aligned_cols=159  Identities=12%  Similarity=0.035  Sum_probs=96.5

Q ss_pred             cEEEEcCcccccccC-------hHHHHHHhhhcCCeEEEecccc-ccccc---------ee---eeec-c--CCc-----
Q psy10669        125 DFLSSGTTCYSRCLD-------YARFRQICDETDSIMFADMSHI-SGLIA---------GV---KGVT-K--TGE-----  176 (337)
Q Consensus       125 klII~~~S~~~~~~d-------~~~l~eia~~~ga~l~vD~AH~-~Gli~---------g~---~~T~-~--~Gg-----  176 (337)
                      ++||+. +++++.+.       +++|+++|+++|++||+|+.|+ .|-.+         ++   ..|. |  .||     
T Consensus       223 aavi~e-p~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~~~~~~~~~v~pdi~t~sK~l~~G~~plg  301 (476)
T 3i5t_A          223 AAFLAE-PILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWFASEKVFGVVPDIITFAKGVTSGYVPLG  301 (476)
T ss_dssp             EEEEEC-SSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHTTCCCCSEEEECGGGGTTSSCCE
T ss_pred             EEEEEC-CccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCceeeecccCCCcchhhhhhhhcCCCcCeE
Confidence            567775 46655433       7889999999999999999997 33222         11   1111 2  133     


Q ss_pred             hhhh--hHHHHHhhc------cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC----CEEe
Q psy10669        177 KILY--DYEEKINNA------VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG----YHVV  244 (337)
Q Consensus       177 ~i~~--~l~~~i~~~------~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G----~~v~  244 (337)
                      ++++  ++.+.+.+.      ..-+.+-+.++...++..+++..+.+   +++.+++.++.+++++.|.+.+    +..+
T Consensus       302 ~v~~~~~i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~v~~v  378 (476)
T 3i5t_A          302 GLAISEAVLARISGENAKGSWFTNGYTYSNQPVACAAALANIELMER---EGIVDQAREMADYFAAALASLRDLPGVAET  378 (476)
T ss_dssp             EEEECHHHHHTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHTTTTSTTEEEE
T ss_pred             EEEECHHHHHHHhcCCcccccccccCCCCcCHHHHHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Confidence            3433  566666542      12222335566777777777766532   4678899999999999998642    2222


Q ss_pred             cCCCCCeEEEEEecCCCc----------chHHHHHHHhhcCceeccCc-ccchhhh
Q psy10669        245 TGGTDVHLILIDLRKNKL----------TGSKVELVLEEIAIACNKNT-GISLAAE  289 (337)
Q Consensus       245 ~~~t~~h~v~V~~~~~~~----------~~~~~~~~L~~~gI~v~~~~-girig~~  289 (337)
                      .  ....++.+++.....          ....+.+.|.+.||.+.+.. -|||..+
T Consensus       379 ~--~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g~~iRi~p~  432 (476)
T 3i5t_A          379 R--SVGLVGCVQCLLDPTRADGTAEDKAFTLKIDERCFELGLIVRPLGDLCVISPP  432 (476)
T ss_dssp             E--EETTEEEEEECCC-----CCHHHHHHHHHHHHHHHHTTEECEEETTEEEECCC
T ss_pred             E--ecCceeEEEEecCccccccccchhHHHHHHHHHHHHCCCEEEecCCEEEEECC
Confidence            2  233466677754321          14456677777799987643 5777544

>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}

Probab=98.84  E-value=9e-08  Score=95.60  Aligned_cols=173  Identities=13%  Similarity=0.071  Sum_probs=106.7

Q ss_pred             cCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHhhC----------------C-c----------
Q psy10669         68 YGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEKAL----------------P-T----------  119 (337)
Q Consensus        68 ~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~aLl----------------~-~----------  119 (337)
                      |.......++|..+++.+++++|.+.    .++.+++| |.||+.++.++.                + .          
T Consensus       140 ~~~s~~~~~le~~~~~~la~l~g~~~----~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s  215 (515)
T 2jis_A          140 YEIAPVFVLMEEEVLRKLRALVGWSS----GDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYS  215 (515)
T ss_dssp             TTTCHHHHHHHHHHHHHHHHHHTCSS----CEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTH
T ss_pred             hhhchHHHHHHHHHHHHHHHHhCCCC----CCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHH
Confidence            33345567889888999999999974    35666555 888877666541                1 1          


Q ss_pred             -------------------------------c--cc-------cccEEEEcCc--ccccccChHHHHHHhhhcCCeEEEe
Q psy10669        120 -------------------------------N--NA-------RFDFLSSGTT--CYSRCLDYARFRQICDETDSIMFAD  157 (337)
Q Consensus       120 -------------------------------~--~a-------~pklII~~~S--~~~~~~d~~~l~eia~~~ga~l~vD  157 (337)
                                                     +  +.       +|++|+++..  ..+...|+++|.++|+++|++++||
T Consensus       216 ~~~~~~~~g~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~g~~l~vD  295 (515)
T 2jis_A          216 IQKGAAFLGLGTDSVRVVKADERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHVD  295 (515)
T ss_dssp             HHHHHHHTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEE
T ss_pred             HHHHHHHcCCCCCcEEEEecCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHcCCeEEEe
Confidence                                           0  00       1567777632  3568889999999999999999999


Q ss_pred             ccccccccc---------e------eeeeccC------C-chhhh--h--HHHHHhhccCCCCCC------------CC-
Q psy10669        158 MSHISGLIA---------G------VKGVTKT------G-EKILY--D--YEEKINNAVFPSLQG------------GP-  198 (337)
Q Consensus       158 ~AH~~Gli~---------g------~~~T~~~------G-g~i~~--~--l~~~i~~~~~p~~~g------------~~-  198 (337)
                      +||+.|.+.         +      ++++.||      | |+++.  +  +.+.......|++.+            ++ 
T Consensus       296 ~a~~~~~~~~~~~~~~~~g~~~aD~v~~s~hK~l~~p~g~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~  375 (515)
T 2jis_A          296 AAWGGSVLLSQTHRHLLDGIQRADSVAWNPHKLLAAGLQCSALLLQDTSNLLKRCHGSQASYLFQQDKFYDVALDTGDKV  375 (515)
T ss_dssp             ETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESCCSCHHHHHHCC---------CCSCGGGCCGGGC
T ss_pred             hhhhhHHHhChhhHhhcCCCccCCEEEECcccccCCCCCeeEEEEeChHHHHHHHhcCCchhccCCcccccccCCCCCCC
Confidence            999988764         1      2233232      2 44433  3  433211111111110            00 


Q ss_pred             -----cHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-CCCEEec
Q psy10669        199 -----HNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-RGYHVVT  245 (337)
Q Consensus       199 -----~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~G~~v~~  245 (337)
                           .... .++..++..+....++++.++..+++++|++.|.+ .|++++.
T Consensus       376 ~~~~rr~~a-l~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~  427 (515)
T 2jis_A          376 VQCGRRVDC-LKLWLMWKAQGDQGLERRIDQAFVLARYLVEEMKKREGFELVM  427 (515)
T ss_dssp             SCSSCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESS
T ss_pred             CCCCCcccH-HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeC
Confidence                 0001 12222233333356788899999999999999998 4999986

>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}

Probab=98.83  E-value=1.3e-07  Score=90.59  Aligned_cols=155  Identities=6%  Similarity=-0.021  Sum_probs=90.8

Q ss_pred             ccEEEEc-Ccc-cccccC---hHHHHHHhhhcCCeEEEeccccccccc--------------eeeeec-c---CC---ch
Q psy10669        124 FDFLSSG-TTC-YSRCLD---YARFRQICDETDSIMFADMSHISGLIA--------------GVKGVT-K---TG---EK  177 (337)
Q Consensus       124 pklII~~-~S~-~~~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~--------------g~~~T~-~---~G---g~  177 (337)
                      +++|++. +++ .+...|   +++|.++|+++|+++++|++|...+-+              .+++|. |   .|   |+
T Consensus       181 ~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~  260 (417)
T 3g7q_A          181 TGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGIIFSEARPLWNPNIILCMSLSKLGLPGSRCGI  260 (417)
T ss_dssp             EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCCCCCCTTEEEEEESGGGTCTTSCCEE
T ss_pred             ceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCccccccccccccccCCCCCEEEEEechhccCCCcceEE
Confidence            3555554 333 346677   667778899999999999999742111              123333 2   12   55


Q ss_pred             hhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHh-chhhHH-HHHHHHHHHHHHHHHHHhC----CCEEecCCCC
Q psy10669        178 ILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQ-SDEFKS-YQAQVKANASHLSDEMIKR----GYHVVTGGTD  249 (337)
Q Consensus       178 i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~-~~~~~~-y~~~v~~na~~l~~~L~~~----G~~v~~~~t~  249 (337)
                      ++.  ++.+.+......... ++++...++++..+.... .....+ .++++.++.+.+.+.|.+.    |+++... ..
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~  338 (417)
T 3g7q_A          261 IIANDKTITAIANMNGIISL-APGGMGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQQTIAIIRRYLSEERCLIHKP-EG  338 (417)
T ss_dssp             EECCHHHHHHHHHHHHHHCC-CCCSHHHHHHHHHHHTTCHHHHHHHTHHHHHHHHHHHHHHHHHHHCCTTTCEEECC-CB
T ss_pred             EEeCHHHHHHHHHhhcceee-CCCcHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeeCC-Cc
Confidence            554  466655433221212 233344444444333210 011112 4556667777777777662    6777642 44


Q ss_pred             CeEEEEEecCCCcchHHHHHHHhhcCceecc
Q psy10669        250 VHLILIDLRKNKLTGSKVELVLEEIAIACNK  280 (337)
Q Consensus       250 ~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~  280 (337)
                      +..+++++...+.+..++.+.|.+.||.+.+
T Consensus       339 g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~  369 (417)
T 3g7q_A          339 AIFLWLWFKDLPITTELLYQRLKARGVLMVP  369 (417)
T ss_dssp             SSEEEEECTTCSSCHHHHHHHHHHTTEECEE
T ss_pred             ceEEEEEcCCCCCCHHHHHHHHHHCCEEEEC
Confidence            5677788876566888899999989999875

>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*

Probab=98.83  E-value=8.1e-08  Score=93.30  Aligned_cols=153  Identities=8%  Similarity=0.025  Sum_probs=94.1

Q ss_pred             ccEEEEcCcc--cccccC----hHHHHHHhhhcCCeEEEeccccccccc---------e----eeeecc------CCchh
Q psy10669        124 FDFLSSGTTC--YSRCLD----YARFRQICDETDSIMFADMSHISGLIA---------G----VKGVTK------TGEKI  178 (337)
Q Consensus       124 pklII~~~S~--~~~~~d----~~~l~eia~~~ga~l~vD~AH~~Gli~---------g----~~~T~~------~Gg~i  178 (337)
                      +++|++.+..  -+...|    +++|+++|+++|++|++|++|+ |+..         +    +.+..|      .+|++
T Consensus       204 ~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~~~g~~~~~~~~~~~~di~s~sK~l~~G~~~G~v  282 (434)
T 2epj_A          204 IAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVT-GFRLGLEGAQGYFNIEGDIIVLGKIIGGGFPVGAV  282 (434)
T ss_dssp             EEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTT-TTTSSTTHHHHHHTCCCSEEEEEGGGGTTSSCEEE
T ss_pred             EEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchh-ceeCCcchhhHHhCCCCCeeeecchhcCCcceeee
Confidence            3577776532  245566    8899999999999999999998 5521         1    111112      23444


Q ss_pred             hh--hHHHHHhhcc--CCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC----CCEE-ecCCCC
Q psy10669        179 LY--DYEEKINNAV--FPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR----GYHV-VTGGTD  249 (337)
Q Consensus       179 ~~--~l~~~i~~~~--~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~----G~~v-~~~~t~  249 (337)
                      +.  ++.+.+.+..  +.+.+-+.++...++...++..+.+   +++.+++.++.++|.+.|.+.    |+.. +.  ..
T Consensus       283 ~~~~~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~--~~  357 (434)
T 2epj_A          283 AGSREVMSLLTPQGKVFNAGTFNAHPITMAAGLATLKALEE---EPVYSVSREAAKALEEAASEVLDRTGLPYTIN--RV  357 (434)
T ss_dssp             EECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHHH---SCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEE--EE
T ss_pred             eecHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEE--Ee
Confidence            43  4544444311  1111113566677777677766532   356788889999999998773    6532 22  23


Q ss_pred             CeEEEEEecCC------------CcchHHHHHHHhhcCceeccCc
Q psy10669        250 VHLILIDLRKN------------KLTGSKVELVLEEIAIACNKNT  282 (337)
Q Consensus       250 ~h~v~V~~~~~------------~~~~~~~~~~L~~~gI~v~~~~  282 (337)
                      ..++++.+...            .....++.+.|.+.||.+.+..
T Consensus       358 g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~  402 (434)
T 2epj_A          358 ESMMQLFIGVEEVSNAAQARKADKKFYVKLHEEMLRRGVFIAPSN  402 (434)
T ss_dssp             TTEEEEEETCSCCSSHHHHTTSCHHHHHHHHHHHHHTTEECCSST
T ss_pred             eeEEEEEEeCCCcccchhccccCHHHHHHHHHHHHHCCeEEeccC
Confidence            45777887641            1234567777778899998643

>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}

Probab=98.83  E-value=1.6e-07  Score=90.49  Aligned_cols=157  Identities=13%  Similarity=0.117  Sum_probs=94.1

Q ss_pred             EEEEc-C-cc-cccccChHHHHHHhh---------hcCCeEEEeccccccccc---------------------eeeeec
Q psy10669        126 FLSSG-T-TC-YSRCLDYARFRQICD---------ETDSIMFADMSHISGLIA---------------------GVKGVT  172 (337)
Q Consensus       126 lII~~-~-S~-~~~~~d~~~l~eia~---------~~ga~l~vD~AH~~Gli~---------------------g~~~T~  172 (337)
                      +|++. + .+ .+...|.+++.+|++         ++|+++++|++|.- +..                     .++++.
T Consensus       182 ~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~  260 (418)
T 3rq1_A          182 VVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLD-YSGEKDEVRAFFNKFSHLPKEILTCVCYSL  260 (418)
T ss_dssp             EEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGG-GSSCHHHHHGGGGGGTTCCTTEEEEEEEES
T ss_pred             EEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccc-ccCChHHHHHHHHHHHhcCCCceEEEEEeC
Confidence            56654 4 23 367888777775554         89999999999832 111                     012233


Q ss_pred             -c----CC---chhhh-----hHHHHHhhcc---CCCCCCCCcHHHHHHHHHHHHHH-----hchhhHHHHHHHHHHHHH
Q psy10669        173 -K----TG---EKILY-----DYEEKINNAV---FPSLQGGPHNHAIGAIATAMLQA-----QSDEFKSYQAQVKANASH  231 (337)
Q Consensus       173 -~----~G---g~i~~-----~l~~~i~~~~---~p~~~g~~~~~~iaala~a~~e~-----~~~~~~~y~~~v~~na~~  231 (337)
                       |    .|   |+++.     ++.+.+....   .-+..++++....+++..++...     ...+.+++++++.++.++
T Consensus       261 sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  340 (418)
T 3rq1_A          261 SKGFTMYGQRVGAMIGISDDEEIADEFFEVNKSTSRATWSNICRPAMRTMANIVADPAKFKEYEAERNCYYQLIRDRADI  340 (418)
T ss_dssp             TTTTTCCSSCCEEEEEEESSHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCcCCcceEEEEEeCCHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             2    12   55543     4555444321   00112345566666655554321     011223567788889999


Q ss_pred             HHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCc-ccchhh
Q psy10669        232 LSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT-GISLAA  288 (337)
Q Consensus       232 l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~-girig~  288 (337)
                      +.+.|.+.|+++... ..+..+++++.    +..++.+.|.+.||.+.+.. .+||+.
T Consensus       341 l~~~L~~~g~~~~~~-~~~~~~~~~~~----~~~~~~~~l~~~gi~v~~g~~~iRis~  393 (418)
T 3rq1_A          341 FKQEAAQVGLPMLPY-RGGFFITIPTD----SANAICEELKKEHIYVIALANGIRIAA  393 (418)
T ss_dssp             HHHHHHHHTCCCCCC-CSSSEEEEECT----THHHHHHHHHHTTEECEECSSEEEEEG
T ss_pred             HHHHHHhcCCCCCCC-CceEEEEcCCC----CHHHHHHHHHhCCEEEecCCCCeEEEE
Confidence            999999889887652 22334455552    56778888999999998755 789874

>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*

Probab=98.82  E-value=9.6e-08  Score=92.39  Aligned_cols=162  Identities=9%  Similarity=0.044  Sum_probs=100.2

Q ss_pred             ccEEEEc-Ccc-cccccC---hHHHHHHhhhcCCeEEEeccccccccc------------------------eeeeeccC
Q psy10669        124 FDFLSSG-TTC-YSRCLD---YARFRQICDETDSIMFADMSHISGLIA------------------------GVKGVTKT  174 (337)
Q Consensus       124 pklII~~-~S~-~~~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~------------------------g~~~T~~~  174 (337)
                      +++|++. +.+ .+...|   +++|.++|+++|+++++|++|..+...                        .+..|.+|
T Consensus       189 ~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK  268 (428)
T 1iay_A          189 VKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSK  268 (428)
T ss_dssp             EEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTT
T ss_pred             eEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCCCCccCHHHhccccccccCCCCcEEEEecchh
Confidence            4555544 433 467788   778889999999999999999863221                        01233322


Q ss_pred             -----C---chhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHH--hchhhHHHHHHHHHHHHHHHHHHHhCCC
Q psy10669        175 -----G---EKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQA--QSDEFKSYQAQVKANASHLSDEMIKRGY  241 (337)
Q Consensus       175 -----G---g~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~--~~~~~~~y~~~v~~na~~l~~~L~~~G~  241 (337)
                           |   |+++.   ++.+.+.....+   .+.+.+..+++..++...  .+...++.++++.++.++|.+.|.+.|+
T Consensus       269 ~~g~~Glr~G~~~~~~~~~~~~~~~~~~~---~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~  345 (428)
T 1iay_A          269 DMGLPGFRVGIIYSFNDDVVNCARKMSSF---GLVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVVGI  345 (428)
T ss_dssp             TSSCGGGCEEEEEESCHHHHHHHHHHHTT---SCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             hcCCCCceEEEEEeCCHHHHHHHHHHHhc---ccCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence                 2   44443   466655543322   234556666555554332  1113466788889999999999999898


Q ss_pred             EEecCCCCCeEEEEEecCCC-----cchHHHHHHHhh-cCceeccCc--------ccchhhh
Q psy10669        242 HVVTGGTDVHLILIDLRKNK-----LTGSKVELVLEE-IAIACNKNT--------GISLAAE  289 (337)
Q Consensus       242 ~v~~~~t~~h~v~V~~~~~~-----~~~~~~~~~L~~-~gI~v~~~~--------girig~~  289 (337)
                      ++..+ ..+..+++++....     .+..++.+.|.+ +||.+.+..        .+||+..
T Consensus       346 ~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~~~~~~~~~~~~iRis~~  406 (428)
T 1iay_A          346 KCLKN-NAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFA  406 (428)
T ss_dssp             CBCCC-SSSSEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECS
T ss_pred             cccCC-CeeEEEEEechhhcCCCchhHHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEe
Confidence            87642 24556778876421     134456666665 599987632        4777653

>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0

Probab=98.82  E-value=4e-07  Score=88.24  Aligned_cols=156  Identities=6%  Similarity=0.018  Sum_probs=93.6

Q ss_pred             cEEEEcCcccc---cccC----hHHHHHHhhhcCCeEEEecccc---ccccc-----e----eeeecc------CCchhh
Q psy10669        125 DFLSSGTTCYS---RCLD----YARFRQICDETDSIMFADMSHI---SGLIA-----G----VKGVTK------TGEKIL  179 (337)
Q Consensus       125 klII~~~S~~~---~~~d----~~~l~eia~~~ga~l~vD~AH~---~Gli~-----g----~~~T~~------~Gg~i~  179 (337)
                      ++||+.+ .++   ...+    +++|+++|+++|++|++|++|+   .|-..     +    +.+..|      .-|+++
T Consensus       204 ~~vi~ep-~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~~~g~~~~~~~~~~~~di~t~sK~~~~G~~iG~~~  282 (434)
T 3l44_A          204 AAILVEP-IVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAFRFMYGGAQDLLGVTPDLTALGKVIGGGLPIGAYG  282 (434)
T ss_dssp             EEEEECS-SBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTSSSSCHHHHHTCCCSEEEEEGGGGTTSSCEEEE
T ss_pred             EEEEEcC-CCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccceeccccHHHHHcCCCCCeeehhhhhcCCcCeeeEE
Confidence            5677764 433   3444    7889999999999999999996   22211     1    111112      113333


Q ss_pred             h--hHHHHHhhc--cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh----CCCE-EecCCCCC
Q psy10669        180 Y--DYEEKINNA--VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK----RGYH-VVTGGTDV  250 (337)
Q Consensus       180 ~--~l~~~i~~~--~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~----~G~~-v~~~~t~~  250 (337)
                      .  ++.+.+.+.  .+-+...+.++...++..+++..+.+   +++.+++.++.+++++.|.+    .++. .+.  ...
T Consensus       283 ~~~~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~--~~g  357 (434)
T 3l44_A          283 GKKEIMEQVAPLGPAYQAGTMAGNPASMASGIACLEVLQQ---EGLYEKLDELGATLEKGILEQAAKHNIDITLN--RLK  357 (434)
T ss_dssp             ECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEE--EET
T ss_pred             EcHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHc---ccHHHHHHHHHHHHHHHHHHHHHhCCCCEEEE--eec
Confidence            3  465555432  12222335666777777677766532   46788888899999888876    2432 121  345


Q ss_pred             eEEEEEecCCCc------------chHHHHHHHhhcCceeccCc--ccch
Q psy10669        251 HLILIDLRKNKL------------TGSKVELVLEEIAIACNKNT--GISL  286 (337)
Q Consensus       251 h~v~V~~~~~~~------------~~~~~~~~L~~~gI~v~~~~--giri  286 (337)
                      .++.+.+.....            ...++.+.|.+.||.+.+..  .+|+
T Consensus       358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~rl  407 (434)
T 3l44_A          358 GALTVYFTTNTIEDYDAAQDTDGEMFGKFFKLMLQEGVNLAPSKYEAWFL  407 (434)
T ss_dssp             TEEEEEESSSCCCSHHHHHHSCHHHHHHHHHHHHHTTEECCSSTTCCEEC
T ss_pred             cEEEEEEecCcccchhhccccCHHHHHHHHHHHHHCCeEEeecCCCcEEE
Confidence            567777643221            22556677777899998654  5676

>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*

Probab=98.82  E-value=3.6e-07  Score=89.73  Aligned_cols=159  Identities=12%  Similarity=0.098  Sum_probs=94.9

Q ss_pred             cEEEEcCcccccccC-------hHHHHHHhhhcCCeEEEecccc-ccccc--------ee---eeec-c--CC-----ch
Q psy10669        125 DFLSSGTTCYSRCLD-------YARFRQICDETDSIMFADMSHI-SGLIA--------GV---KGVT-K--TG-----EK  177 (337)
Q Consensus       125 klII~~~S~~~~~~d-------~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g~---~~T~-~--~G-----g~  177 (337)
                      ++||+.+ +++..+.       +++|+++|+++|++||+|++|+ .|-.+        ++   ..|. |  .|     |+
T Consensus       223 aaii~ep-~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~sK~l~gG~~~lg~  301 (460)
T 3gju_A          223 AAFIGEP-ILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTMFGSDHYGIKPDLITIAKGLTSAYAPLSG  301 (460)
T ss_dssp             EEEEECS-SBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEEEECGGGTTTSSCCEE
T ss_pred             EEEEECC-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCCeeeeehhhcCCCCCeEE
Confidence            5777764 6654433       7789999999999999999998 44332        11   1122 2  12     33


Q ss_pred             hhh--hHHHHHhh------ccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh--C---CCEEe
Q psy10669        178 ILY--DYEEKINN------AVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK--R---GYHVV  244 (337)
Q Consensus       178 i~~--~l~~~i~~------~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~--~---G~~v~  244 (337)
                      +++  ++.+.+..      ...-+..-+.++...++..+++..+.+   +++.+++.++.+++++.|.+  .   ++..+
T Consensus       302 v~~~~~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~  378 (460)
T 3gju_A          302 VIVADRVWQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANLELIDE---MDLVTNAGETGAYFRAELAKAVGGHKNVGEV  378 (460)
T ss_dssp             EEEEHHHHHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHTTSTTEEEE
T ss_pred             EEECHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Confidence            433  56666642      112122334566677777677766532   35678888888888888854  1   22222


Q ss_pred             cCCCCCeEEEEEecCCCc----------chHHHHHHHhhcCceeccCc---ccchhhh
Q psy10669        245 TGGTDVHLILIDLRKNKL----------TGSKVELVLEEIAIACNKNT---GISLAAE  289 (337)
Q Consensus       245 ~~~t~~h~v~V~~~~~~~----------~~~~~~~~L~~~gI~v~~~~---girig~~  289 (337)
                      .  ....++.+.+.....          ...++.+.|.+.||.+.+..   .|||..+
T Consensus       379 ~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~iRi~~~  434 (460)
T 3gju_A          379 R--GDGMLAAVEFVADKDDRVFFDASQKIGPQVATALAASGVIGRAMPQGDILGFAPP  434 (460)
T ss_dssp             E--EETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEECSSSCEEEECCC
T ss_pred             e--eeeEEEEEEEccCccccccccchHHHHHHHHHHHHHCCeEEecCCCCCEEEEECC
Confidence            2  233456666653210          14567777777899987642   5777644

>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*

Probab=98.81  E-value=1.8e-07  Score=90.02  Aligned_cols=160  Identities=11%  Similarity=0.078  Sum_probs=99.2

Q ss_pred             cEEEEcCc--ccccccC----hHHHHHHhhhcCCeEEEecccccccc--c--------e----eeeecc---CC---chh
Q psy10669        125 DFLSSGTT--CYSRCLD----YARFRQICDETDSIMFADMSHISGLI--A--------G----VKGVTK---TG---EKI  178 (337)
Q Consensus       125 klII~~~S--~~~~~~d----~~~l~eia~~~ga~l~vD~AH~~Gli--~--------g----~~~T~~---~G---g~i  178 (337)
                      ++|++.++  +-+...+    +++|.++|+++|++|++|++|+ |+.  +        +    +.+..|   -|   |++
T Consensus       201 ~~v~~~p~~~ntG~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~di~s~sK~~~~GlriG~~  279 (426)
T 1sff_A          201 AAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQS-GAGRTGTLFAMEQMGVAPDLTTFAKSIAGGFPLAGV  279 (426)
T ss_dssp             EEEEECSBCTTTTSCBCCHHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSGGGGTTSCCSEEEECGGGGTSSCCEEE
T ss_pred             EEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEechhh-ccCcccchhhhhhcCCCCCEEEEcccccCCCceEEE
Confidence            57777542  3344556    8889999999999999999999 542  1        1    111112   13   555


Q ss_pred             hh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC--CEEec-CCCCCeEE
Q psy10669        179 LY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG--YHVVT-GGTDVHLI  253 (337)
Q Consensus       179 ~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G--~~v~~-~~t~~h~v  253 (337)
                      +.  ++.+.+....... .-++++...+++..++..+.+   .++.+++.++.+++.+.|.+.+  +..+. ......++
T Consensus       280 ~~~~~~~~~l~~~~~~~-~~~~~~~~~~a~~aal~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~  355 (426)
T 1sff_A          280 TGRAEVMDAVAPGGLGG-TYAGNPIACVAALEVLKVFEQ---ENLLQKANDLGQKLKDGLLAIAEKHPEIGDVRGLGAMI  355 (426)
T ss_dssp             EEEHHHHTTSCTTSBCC-SSSSCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHTCTTEEEEEEETTEE
T ss_pred             EEcHHHHhhhccCCcCc-CCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEEEEE
Confidence            44  4544444321111 224567777777777776643   2567888899999999988732  32111 01236678


Q ss_pred             EEEecC-------CCcchHHHHHHHhhcCceeccCc----ccchhhh
Q psy10669        254 LIDLRK-------NKLTGSKVELVLEEIAIACNKNT----GISLAAE  289 (337)
Q Consensus       254 ~V~~~~-------~~~~~~~~~~~L~~~gI~v~~~~----girig~~  289 (337)
                      ++++..       .+.+..++.+.|.+.||.+.+..    .|||+..
T Consensus       356 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~iRi~~~  402 (426)
T 1sff_A          356 AIELFEDGDHNKPDAKLTAEIVARARDKGLILLSCGPYYNVLRILVP  402 (426)
T ss_dssp             EEEEBGGGCTTSBCHHHHHHHHHHHHHTTEECEEESTTSCEEEECCC
T ss_pred             EEEEecCccccCCChHHHHHHHHHHHHCCcEEecCCCCCCEEEEECC
Confidence            888853       22346677777878899987633    5788643

>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*

Probab=98.81  E-value=3e-07  Score=88.03  Aligned_cols=230  Identities=13%  Similarity=0.036  Sum_probs=130.6

Q ss_pred             ceeeeccC--CCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhH
Q psy10669         32 GIELIASE--NFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPAN  109 (337)
Q Consensus        32 ~i~l~ase--n~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN  109 (337)
                      -+++-..+  -.+++.|++++.     .|  +        +.   +.+|...++..+++||++.+++  .+.+.||+.|+
T Consensus        30 v~~~~~~~~~~~~~~~v~~a~~-----~~--~--------~~---~~~~~~~~~~~a~~~g~~~~~~--~~~~~ggt~a~   89 (374)
T 2aeu_A           30 LYDLSGLSGGFLIDEKDKALLN-----TY--I--------GS---SYFAEKVNEYGLKHLGGDENDK--CVGFNRTSSAI   89 (374)
T ss_dssp             CEECSSCCCCCCCCHHHHHHHT-----ST--T--------HH---HHHHHHHHHHHHHHHTCCTTEE--EEEESSHHHHH
T ss_pred             eeeecccCCCCCCCHHHHHHHH-----Hh--c--------Cc---hHHHHHHHHHHHHHhCCCCcce--EEEEcChHHHH
Confidence            34444433  355999999985     12  1        11   2333444456688999842112  46667779999


Q ss_pred             HHHHHhhCCc-------------------------------------ccc-cccE-EEEcCcccc---cccChHHHHHHh
Q psy10669        110 FAVCEKALPT-------------------------------------NNA-RFDF-LSSGTTCYS---RCLDYARFRQIC  147 (337)
Q Consensus       110 ~~v~~aLl~~-------------------------------------~~a-~pkl-II~~~S~~~---~~~d~~~l~eia  147 (337)
                      ..++.++ +.                                     +.. ++++ |++...+++   ...|+++|.++|
T Consensus        90 ~~~~~~~-~gd~Vl~~~~~y~~~~~~~~~~~~~g~~~~~v~d~~~l~~~~~~~~~~v~~~~p~nptG~~~~~l~~i~~l~  168 (374)
T 2aeu_A           90 LATILAL-KPKKVIHYLPELPGHPSIERSCKIVNAKYFESDKVGEILNKIDKDTLVIITGSTMDLKVIELENFKKVINTA  168 (374)
T ss_dssp             HHHHHHH-CCSEEEEECSSSSCCTHHHHHHHHTTCEEEEESCHHHHHTTCCTTEEEEEECBCTTSCBCCHHHHHHHHHHH
T ss_pred             HHHHHhC-CCCEEEEecCCCCccHHHHHHHHHcCcEEEEeCCHHHHHhcCCCccEEEEEccCCCCCCCCcccHHHHHHHH
Confidence            8888887 32                                     001 2577 777533332   467888899999


Q ss_pred             hhcCCeEEEecccccccc-------c------eeeeec-c-----CCchhhh--hHHHHHhhccCCCCCCCCcHHHHHHH
Q psy10669        148 DETDSIMFADMSHISGLI-------A------GVKGVT-K-----TGEKILY--DYEEKINNAVFPSLQGGPHNHAIGAI  206 (337)
Q Consensus       148 ~~~ga~l~vD~AH~~Gli-------~------g~~~T~-~-----~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaal  206 (337)
                      +++|+++++|++|..+..       .      .++++. |     .+|+++.  ++.+.+.....+ ..+++++...+++
T Consensus       169 ~~~~~~li~De~~~~~~~~~~~~~~~~~~~~di~~~S~sK~l~g~~~G~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~a~  247 (374)
T 2aeu_A          169 KNKEAIVFVDDASGARVRLLFNQPPALKLGADLVVTSTDKLMEGPRGGLLAGKKELVDKIYIEGTK-FGLEAQPPLLAGI  247 (374)
T ss_dssp             HHHTCCEEEECTTHHHHHHHTTCCCHHHHTCSEEEEETTSSSSSCSCEEEEEEHHHHHHHHHHHHT-TTCBCCHHHHHHH
T ss_pred             HHcCCEEEEECCcccccccccccCCccccCCcEEEecCcccccCcceEEEEECHHHHHHHHHhhcc-ccCCCCHHHHHHH
Confidence            999999999999987641       1      123333 2     3577654  566666543222 1235666677776


Q ss_pred             HHHHHHHhchhhHHHHHHHHHHHHHH----HHHHHh--------CCCEEecCCCCCeEEEEEecCCCcc---hH-HHHHH
Q psy10669        207 ATAMLQAQSDEFKSYQAQVKANASHL----SDEMIK--------RGYHVVTGGTDVHLILIDLRKNKLT---GS-KVELV  270 (337)
Q Consensus       207 a~a~~e~~~~~~~~y~~~v~~na~~l----~~~L~~--------~G~~v~~~~t~~h~v~V~~~~~~~~---~~-~~~~~  270 (337)
                      ..++..+ .   .+..++..++.+.+    .+.|.+        .|+.+...++.....++++.. ..+   .. .+.+.
T Consensus       248 ~~al~~~-~---~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~l  322 (374)
T 2aeu_A          248 YRALKNF-N---LERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTGFVIKRVYKDD-TINIKKLIEIGFNL  322 (374)
T ss_dssp             HHHHHHC-C---HHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSEEEEEEEESSH-HHHHHHHHHHHHHH
T ss_pred             HHHHHHH-h---HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcceeeCCceEEEEeecccc-cccccchHHHHHHH
Confidence            6666554 2   23455666666666    455544        355554322222222322211 001   01 23356


Q ss_pred             HhhcCceeccCc-------ccchhh
Q psy10669        271 LEEIAIACNKNT-------GISLAA  288 (337)
Q Consensus       271 L~~~gI~v~~~~-------girig~  288 (337)
                      |++.||.+.+-.       .+||+.
T Consensus       323 l~~~gV~v~~g~~~~~~~~~lRi~~  347 (374)
T 2aeu_A          323 LKNYGIITITVAGMPGASKSLRIDL  347 (374)
T ss_dssp             HHHHCEECSTTSSSCSSCCSEEEET
T ss_pred             HHhCCEEEecCCCCCCCCCeEEEEc
Confidence            677899987632       578764

>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}

Probab=98.81  E-value=1.4e-07  Score=93.99  Aligned_cols=153  Identities=13%  Similarity=0.050  Sum_probs=91.2

Q ss_pred             ccEEEEcCccc--ccccCh---HHHHHHhhhcCCeEEEeccccccccc------------------------eeeeec-c
Q psy10669        124 FDFLSSGTTCY--SRCLDY---ARFRQICDETDSIMFADMSHISGLIA------------------------GVKGVT-K  173 (337)
Q Consensus       124 pklII~~~S~~--~~~~d~---~~l~eia~~~ga~l~vD~AH~~Gli~------------------------g~~~T~-~  173 (337)
                      ||+|++..-.+  +...+.   ++|.++|+++|+++++|++|..+..+                        .+.+|. |
T Consensus       238 ~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK  317 (500)
T 3tcm_A          238 VRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSK  317 (500)
T ss_dssp             EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSS
T ss_pred             ceEEEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCc
Confidence            56666642222  344444   45556699999999999999865442                        011232 2


Q ss_pred             --------CCchhhh-----hHHHHHhhccCCCCCCCCcHHHHHHHHHHHH----------HHhchhhHHHHHHHHHHHH
Q psy10669        174 --------TGEKILY-----DYEEKINNAVFPSLQGGPHNHAIGAIATAML----------QAQSDEFKSYQAQVKANAS  230 (337)
Q Consensus       174 --------~Gg~i~~-----~l~~~i~~~~~p~~~g~~~~~~iaala~a~~----------e~~~~~~~~y~~~v~~na~  230 (337)
                              ++|+++.     ++.+.+....  ....+++.+..++++.++.          +.. .+.+++++++.++.+
T Consensus       318 ~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~  394 (500)
T 3tcm_A          318 GYYGECGKRGGYFEITGFSAPVREQIYKIA--SVNLCSNITGQILASLVMNPPKASDESYASYK-AEKDGILASLARRAK  394 (500)
T ss_dssp             TTTCCGGGCCEEEEEESCCTTHHHHHHHHH--HTTCCCCHHHHHHHHHHHSCCCSSSTHHHHHH-HHHHHHHHHHHHHHH
T ss_pred             cCCCCCccceEEEEEeCCCHHHHHHHHHHH--hcccCCCHHHHHHHHHHhcCccccchhHHHHH-HHHHHHHHHHHHHHH
Confidence                    2355542     4655554332  1234667777777666653          121 345677889999999


Q ss_pred             HHHHHHHhC-CCEEecCCCCCe-EEEEEecCC----------CcchH--HHHHHHhhcCceeccC
Q psy10669        231 HLSDEMIKR-GYHVVTGGTDVH-LILIDLRKN----------KLTGS--KVELVLEEIAIACNKN  281 (337)
Q Consensus       231 ~l~~~L~~~-G~~v~~~~t~~h-~v~V~~~~~----------~~~~~--~~~~~L~~~gI~v~~~  281 (337)
                      +|.+.|.+. |+++..  .+.. .+++.+...          +....  .+.+.|++.||.+.+-
T Consensus       395 ~l~~~L~~~~g~~~~~--~~g~~~~~~~~~lp~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg  457 (500)
T 3tcm_A          395 ALEHAFNKLEGITCNE--AEGAMYVFPQICLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPG  457 (500)
T ss_dssp             HHHHHHHTSTTEECCC--CCBTTEECCEECCCHHHHHHHHHHTSCHHHHHHHHHHHHHCEECEES
T ss_pred             HHHHHHhcCCCcEEec--CCeEEEEeeeecCchhhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeC
Confidence            999999986 888764  3333 334334321          11112  2457788889999864

>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}

Probab=98.81  E-value=7.2e-08  Score=92.74  Aligned_cols=157  Identities=16%  Similarity=0.125  Sum_probs=92.2

Q ss_pred             cEEEE-cCcc-cccccChHH---HHHHhhhcCCeEEEeccccccccc-------------------eeeeec-c----CC
Q psy10669        125 DFLSS-GTTC-YSRCLDYAR---FRQICDETDSIMFADMSHISGLIA-------------------GVKGVT-K----TG  175 (337)
Q Consensus       125 klII~-~~S~-~~~~~d~~~---l~eia~~~ga~l~vD~AH~~Gli~-------------------g~~~T~-~----~G  175 (337)
                      +++++ .+.+ .+...+.++   |.++|+++|+++++|++|.....+                   .+++|+ |    .|
T Consensus       185 ~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G  264 (409)
T 4eu1_A          185 VILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVPNLIVAQSFSKNFGLYG  264 (409)
T ss_dssp             EEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTSSCCEEEEECTTTSSCGG
T ss_pred             EEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHhhCCcEEEEecCcccccCcc
Confidence            45553 3322 245566554   778899999999999998743321                   123343 3    24


Q ss_pred             ---chh---hh--h----HHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHh-----chhhHHHHHHHHHHHHHHHHHHHh
Q psy10669        176 ---EKI---LY--D----YEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQ-----SDEFKSYQAQVKANASHLSDEMIK  238 (337)
Q Consensus       176 ---g~i---~~--~----l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~-----~~~~~~y~~~v~~na~~l~~~L~~  238 (337)
                         |++   ..  +    +.+.+.....+... +++....++.+.++....     ....++.++++.++.++|.+.|.+
T Consensus       265 ~riG~~~~v~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~  343 (409)
T 4eu1_A          265 HRCGALHISTASAEEAKRLVSQLALLIRPMYN-NPPLYGAWVVSSILKDPQLTALWKKELKQMSSRIAEVRKRLVSELKA  343 (409)
T ss_dssp             GCCEEEEEECSSHHHHHHHHHHHHHHHHHHHS-SCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCceEEEEEeCCHHHHHHHHHHHHHHHhhhcC-CCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence               663   43  3    44444433222222 344455555555554210     123567888999999999999999


Q ss_pred             CC----CEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCcccchhhhh
Q psy10669        239 RG----YHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNTGISLAAEI  290 (337)
Q Consensus       239 ~G----~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~girig~~~  290 (337)
                      .|    +++..  .+....++ +   +++...+...|+++||.+.+  |.||+...
T Consensus       344 ~g~~~~~~~~~--~~~~~~~~-~---~~~~~~~~~ll~~~gv~v~p--~~Ri~~~~  391 (409)
T 4eu1_A          344 CGSVHDWSHIE--RQVGMMAY-T---GLTREQVELLRSEYHIYMTL--NGRAAVSG  391 (409)
T ss_dssp             TTCCSCCHHHH--HSCSSEEE-C---CCCHHHHHHHHHHHCEECCT--TCEEEGGG
T ss_pred             cCCCCCcceec--CCceEEEE-e---CCCHHHHHHHHHcCCEEEcC--CCEEEEEe
Confidence            87    55543  22333332 1   23456677777788999998  67876543

>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}

Probab=98.81  E-value=3.3e-07  Score=91.32  Aligned_cols=153  Identities=13%  Similarity=0.050  Sum_probs=92.3

Q ss_pred             ccEEEEc-Ccc-cccccC---hHHHHHHhhhcCCeEEEeccccccccce-------------------------eeeec-
Q psy10669        124 FDFLSSG-TTC-YSRCLD---YARFRQICDETDSIMFADMSHISGLIAG-------------------------VKGVT-  172 (337)
Q Consensus       124 pklII~~-~S~-~~~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~g-------------------------~~~T~-  172 (337)
                      +|+|++. +++ .+...+   +++|.++|+++|+++++|++|.-+...+                         +.+|. 
T Consensus       236 ~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~S  315 (498)
T 3ihj_A          236 PKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTS  315 (498)
T ss_dssp             EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESS
T ss_pred             CeEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccc
Confidence            5777764 322 134444   4557788999999999999998654420                         11222 


Q ss_pred             c--------CCchhh---h--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHH----------HHhchhhHHHHHHHHHHH
Q psy10669        173 K--------TGEKIL---Y--DYEEKINNAVFPSLQGGPHNHAIGAIATAML----------QAQSDEFKSYQAQVKANA  229 (337)
Q Consensus       173 ~--------~Gg~i~---~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~----------e~~~~~~~~y~~~v~~na  229 (337)
                      |        ++|+++   .  ++.+.+.....  ...+++.+..++++.++.          +.. .+.++.++++.++.
T Consensus       316 K~~~G~~G~R~G~~~~~~~~~~l~~~l~~~~~--~~~~~~~~~q~a~~~~l~~~~~g~~~~~~~~-~~~~~~~~~l~~~~  392 (498)
T 3ihj_A          316 KGYMGECGYRGGYMEVINLHPEIKGQLVKLLS--VRLCPPVSGQAAMDIVVNPPVAGEESFEQFS-REKESVLGNLAKKA  392 (498)
T ss_dssp             SSTTCCSSSCCEEEEEESCCHHHHHHHHHHHH--HSCCCCHHHHHHHHHHTCCCCTTSTTHHHHH-HHHHHHHHHHHHHH
T ss_pred             cccccCcccceEEEEEecCCHHHHHHHHHHHh--ccCCCCHHHHHHHHHHhcCCccCcccHHHHH-HHHHHHHHHHHHHH
Confidence            2        346665   2  46665554322  233456666666655542          111 23456678899999


Q ss_pred             HHHHHHHHhC-CCEEecCCCCCe-EEEEEecC----------CCcchHH--HHHHHhhcCceeccC
Q psy10669        230 SHLSDEMIKR-GYHVVTGGTDVH-LILIDLRK----------NKLTGSK--VELVLEEIAIACNKN  281 (337)
Q Consensus       230 ~~l~~~L~~~-G~~v~~~~t~~h-~v~V~~~~----------~~~~~~~--~~~~L~~~gI~v~~~  281 (337)
                      +++.+.|.+. |+++..  .+.. .+++++..          .+++..+  +.+.|++.||.+.+-
T Consensus       393 ~~l~~~L~~~~g~~~~~--p~gg~~~~~~l~~p~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pG  456 (498)
T 3ihj_A          393 KLTEDLFNQVPGIHCNP--LQGAMYAFPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPG  456 (498)
T ss_dssp             HHHHHHHHTSTTEECCC--CCBSSEECCEECCCHHHHHHHHHTTSCHHHHHHHHHHHHHCBCCEEG
T ss_pred             HHHHHHHhcCCCcEecC--CCeEEEEEEeccCchhhhHHHHhcCCCcHHHHHHHHHHHCCEEEEeC
Confidence            9999999985 888764  3333 33444532          2444444  467788889998763

>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*

Probab=98.80  E-value=2.2e-07  Score=92.45  Aligned_cols=171  Identities=12%  Similarity=0.059  Sum_probs=106.1

Q ss_pred             chHHHHHHHHHHHHHhhcCCCC-CCCcceeecCCC-chhHHHHHHhhC----------------Cc--------------
Q psy10669         72 QFIDEIEIVAQQRSLKAFNLDP-EQWGCNVQPYSG-SPANFAVCEKAL----------------PT--------------  119 (337)
Q Consensus        72 ~~~~~lE~~~~~~~a~lfg~~~-~~~~~~v~~~Sg-t~AN~~v~~aLl----------------~~--------------  119 (337)
                      ....++|..+++.++++||.+. +   .++.+++| |.||+.++.++.                +.              
T Consensus       128 ~~~~~le~~~~~~la~~~g~~~~~---~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~~~  204 (504)
T 2okj_A          128 PVFVLMEQITLKKMREIVGWSSKD---GDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKK  204 (504)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCSSS---CEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHH
T ss_pred             hHHHHHHHHHHHHHHHHhCCCCCC---CCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHHHHH
Confidence            4456889888889999999872 1   35666555 889877666652                21              


Q ss_pred             ----------------------------c--cc-------cccEEEEcCc--ccccccChHHHHHHhhhcCCeEEEeccc
Q psy10669        120 ----------------------------N--NA-------RFDFLSSGTT--CYSRCLDYARFRQICDETDSIMFADMSH  160 (337)
Q Consensus       120 ----------------------------~--~a-------~pklII~~~S--~~~~~~d~~~l~eia~~~ga~l~vD~AH  160 (337)
                                                  +  +.       +|++|+++..  .++...|+++|.++|+++|++++||+||
T Consensus       205 ~~~~~g~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~g~~lhvD~a~  284 (504)
T 2okj_A          205 AGAALGFGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAW  284 (504)
T ss_dssp             HHHHTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETT
T ss_pred             HHHHcCCCcccEEEEecCCCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEehhh
Confidence                                        0  00       2567777632  3567889999999999999999999999


Q ss_pred             cccccc---------e------eeeeccC-------Cchhhh---hHHHHHhhccCCCCCCCCc----------------
Q psy10669        161 ISGLIA---------G------VKGVTKT-------GEKILY---DYEEKINNAVFPSLQGGPH----------------  199 (337)
Q Consensus       161 ~~Gli~---------g------~~~T~~~-------Gg~i~~---~l~~~i~~~~~p~~~g~~~----------------  199 (337)
                      +.|.+.         |      +++++||       .|+++.   ++.+......-|++.++..                
T Consensus       285 ~~~~~~~~~~~~~~~g~~~~D~i~~~~hK~~~~p~~~g~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  364 (504)
T 2okj_A          285 GGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQCG  364 (504)
T ss_dssp             GGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESSTTHHHHHHCCCCSSSCCSCCSSCGGGCCGGGSSCSS
T ss_pred             hhHHHhCHhhHhhcCCcccCCEEEECchhhcCCCcceEEEEEECHHHHHHHhcCCCccccCCcccccCcCCcccCCCCCC
Confidence            887753         1      2233232       244433   2433222121222211100                


Q ss_pred             -HHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-CCCEEec
Q psy10669        200 -NHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-RGYHVVT  245 (337)
Q Consensus       200 -~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~G~~v~~  245 (337)
                       .....++..++..+....++++.++..+++++|.+.|.+ .|++++.
T Consensus       365 rr~~~l~~~a~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~  412 (504)
T 2okj_A          365 RHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVF  412 (504)
T ss_dssp             CBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEESS
T ss_pred             CCccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEe
Confidence             000112222233333356788899999999999999998 5999885

>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}

Probab=98.80  E-value=3.6e-07  Score=89.22  Aligned_cols=153  Identities=11%  Similarity=0.041  Sum_probs=89.1

Q ss_pred             ccEEEEcCc--ccccccC----hHHHHHHhhhcCCeEEEecccc-ccccc--------ee---eeec-c---CC----ch
Q psy10669        124 FDFLSSGTT--CYSRCLD----YARFRQICDETDSIMFADMSHI-SGLIA--------GV---KGVT-K---TG----EK  177 (337)
Q Consensus       124 pklII~~~S--~~~~~~d----~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g~---~~T~-~---~G----g~  177 (337)
                      +++||+.+.  +-+...+    +++|+++|+++|++||+|++|. .|-.+        ++   ..|. |   .|    |+
T Consensus       216 ~~~vi~ep~~~n~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~~~~~~~~~~di~t~sK~l~~G~~~ig~  295 (452)
T 3n5m_A          216 IAAFIMEPIITGGGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKAFGFMNYDVKPDIITMAKGITSAYLPLSA  295 (452)
T ss_dssp             EEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEEEECGGGGTTSSCCEE
T ss_pred             EEEEEEccccCCCCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccccchhhhcCCCCCEEeecccccCCCcceEE
Confidence            356777643  2234444    7889999999999999999997 43332        11   1121 2   13    44


Q ss_pred             hhh--hHHHHHhh-----ccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CC---EEec
Q psy10669        178 ILY--DYEEKINN-----AVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GY---HVVT  245 (337)
Q Consensus       178 i~~--~l~~~i~~-----~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~---~v~~  245 (337)
                      ++.  ++.+.+..     ..+-+.+.+.++...++..+++..+.+   +++.+++.++.+++++.|.+.  ++   ..+.
T Consensus       296 ~~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~  372 (452)
T 3n5m_A          296 TAVKREIYEAFKGKGEYEFFRHINTFGGNPAACALALKNLEIIEN---ENLIERSAQMGSLLLEQLKEEIGEHPLVGDIR  372 (452)
T ss_dssp             EEEEHHHHGGGCSSSTTCSCCCCCSSTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEE
T ss_pred             EEECHHHHHHHhhccCCCCccccCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence            443  56665532     111122334566666666666665532   467888899999999988763  32   2222


Q ss_pred             CCCCCeEEEEEecCCCc--------chHHHHHHHhhcCceeccC
Q psy10669        246 GGTDVHLILIDLRKNKL--------TGSKVELVLEEIAIACNKN  281 (337)
Q Consensus       246 ~~t~~h~v~V~~~~~~~--------~~~~~~~~L~~~gI~v~~~  281 (337)
                        ....++.+++.....        ...++.+.|.+.||.+.+.
T Consensus       373 --~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~  414 (452)
T 3n5m_A          373 --GKGLLVGIELVNDKETKEPIDNDKIASVVNACKEKGLIIGRN  414 (452)
T ss_dssp             --ESSSCEEEEEEEETTTTEECCHHHHHHHHHHHHHTTEECEEC
T ss_pred             --EEEEEEEEEEecCCcccCCCCHHHHHHHHHHHHHCCcEEeec
Confidence              233355566532110        1245667777789998764

>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3

Probab=98.80  E-value=4.5e-08  Score=95.36  Aligned_cols=121  Identities=13%  Similarity=0.081  Sum_probs=85.0

Q ss_pred             ceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHH
Q psy10669         32 GIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFA  111 (337)
Q Consensus        32 ~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~  111 (337)
                      .-.+..|..|+.|.+.++... +.+. ..|+..+|+  ++....++|    +++++++|.++     .+.++||+.||..
T Consensus        22 ~~pi~~~~~~~~~~~~~~~~~-~~~~-~~~~~y~~~--~~~~~~~l~----~~la~~~g~~~-----~v~~~sGt~A~~~   88 (421)
T 2ctz_A           22 QVPIYPTTSYVFKSPEHAANL-FALK-EFGNIYSRI--MNPTVDVLE----KRLAALEGGKA-----ALATASGHAAQFL   88 (421)
T ss_dssp             SCCBCCCSCBCCSCHHHHHHH-HTTT-TGGGSCBTT--BCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHH
T ss_pred             cCCeeccceeeeCCHHHHHHh-hccc-cCCCcccCC--CChHHHHHH----HHHHHHhCCCc-----eEEecCHHHHHHH
Confidence            456788999998777665532 2222 123333333  234445565    58899999874     5889999999988


Q ss_pred             HHHhhCCc------------------------------cc-c-------------cccEEEEcCcc--cccccChHHHHH
Q psy10669        112 VCEKALPT------------------------------NN-A-------------RFDFLSSGTTC--YSRCLDYARFRQ  145 (337)
Q Consensus       112 v~~aLl~~------------------------------~~-a-------------~pklII~~~S~--~~~~~d~~~l~e  145 (337)
                      ++.+++++                              .. .             ++++|++..-.  .+...|+++|.+
T Consensus        89 ~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~n~~G~~~~l~~i~~  168 (421)
T 2ctz_A           89 ALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSREERPEEFLALTDEKTRAWWVESIGNPALNIPDLEALAQ  168 (421)
T ss_dssp             HHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCTTCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHH
T ss_pred             HHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHhhccCCeEEEEECCCCCCCcccCHHHHHH
Confidence            88888654                              11 0             15777776333  368889999999


Q ss_pred             HhhhcCCeEEEeccc-ccccc
Q psy10669        146 ICDETDSIMFADMSH-ISGLI  165 (337)
Q Consensus       146 ia~~~ga~l~vD~AH-~~Gli  165 (337)
                      +|+++|+++++|++| ..|..
T Consensus       169 ~a~~~g~~livD~~~~~~g~~  189 (421)
T 2ctz_A          169 AAREKGVALIVDNTFGMGGYL  189 (421)
T ss_dssp             HHHHHTCEEEEECGGGGGGTS
T ss_pred             HHHHcCCEEEEECCccccccc
Confidence            999999999999999 88863

>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B

Probab=98.79  E-value=3.8e-08  Score=95.49  Aligned_cols=217  Identities=13%  Similarity=0.049  Sum_probs=128.7

Q ss_pred             eeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHH
Q psy10669         33 IELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV  112 (337)
Q Consensus        33 i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v  112 (337)
                      -.+..|..|..+.+.+...    ..|      +|+  ++...+++|    +++++++|.+.     ++.++||+.|+..+
T Consensus        40 ~pi~~stt~~~~~~~~~~~----~~y------~r~--~~p~~~~l~----~~la~~~g~~~-----~i~~~sG~~ai~~~   98 (403)
T 3cog_A           40 PPISLSTTFKQGAPGQHSG----FEY------SRS--GNPTRNCLE----KAVAALDGAKY-----CLAFASGLAATVTI   98 (403)
T ss_dssp             CCBCCCSCBCCC--------------------------CHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHH
T ss_pred             CCeeccceeecCCccccCC----Ccc------cCC--CCchHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHH
Confidence            3455666677666544321    111      121  334455666    58889999874     69999999998888


Q ss_pred             HHhhCCc--------------------------------------cc--c---cccEEEEc-Ccc-cccccChHHHHHHh
Q psy10669        113 CEKALPT--------------------------------------NN--A---RFDFLSSG-TTC-YSRCLDYARFRQIC  147 (337)
Q Consensus       113 ~~aLl~~--------------------------------------~~--a---~pklII~~-~S~-~~~~~d~~~l~eia  147 (337)
                      +. ++++                                      .+  +   ++++|++. .++ .+...|+++|.++|
T Consensus        99 ~~-l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~~i~~~t~~v~~~~p~nptG~~~~l~~i~~la  177 (403)
T 3cog_A           99 TH-LLKAGDQIICMDDVYGGTNRYFRQVASEFGLKISFVDCSKIKLLEAAITPETKLVWIETPTNPTQKVIDIEGCAHIV  177 (403)
T ss_dssp             HT-TSCTTCEEEEESSCCHHHHHHHHHTGGGGTCEEEEECTTSHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHH
T ss_pred             HH-HhCCCCEEEEeCCCcchHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCcCCeEEEEECCCCCCCeeeCHHHHHHHH
Confidence            88 7654                                      00  0   25777765 333 35888999999999


Q ss_pred             hhcC-CeEEEeccccccccc--------eeeee-cc-----C---Cchhhh---hHHHHHhhccCCCCCCCCcHHHHHHH
Q psy10669        148 DETD-SIMFADMSHISGLIA--------GVKGV-TK-----T---GEKILY---DYEEKINNAVFPSLQGGPHNHAIGAI  206 (337)
Q Consensus       148 ~~~g-a~l~vD~AH~~Gli~--------g~~~T-~~-----~---Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaal  206 (337)
                      +++| +++++|++|..+...        .++.+ +|     .   +|+++.   ++.+.+.....+. .+++++...++.
T Consensus       178 ~~~g~~~livD~~~~~~~~~~~~~~~~div~~S~sK~~~g~~~~~~G~v~~~~~~l~~~l~~~~~~~-g~~~~~~~~~~~  256 (403)
T 3cog_A          178 HKHGDIILVVDNTFMSPYFQRPLALGADISMYSATKYMNGHSDVVMGLVSVNCESLHNRLRFLQNSL-GAVPSPIDCYLC  256 (403)
T ss_dssp             TSSSCCEEEEECTTTCTTTCCTTTTTCSEEEEETTTTTTCSSCCCCEEEEECCHHHHHHHHHHHHHH-CCCCCHHHHHHH
T ss_pred             HHcCCCEEEEECCCcccccCCccccCCeEEEEcChhhccCCCCCeEEEEEECcHHHHHHHHHHHHhc-CCCCCHHHHHHH
Confidence            9999 999999999988643        12333 23     1   366654   4666665443221 223444433333


Q ss_pred             HHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC---------------CCEEecC--CCCCeEEEEEecCCCcchHHHHH
Q psy10669        207 ATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR---------------GYHVVTG--GTDVHLILIDLRKNKLTGSKVEL  269 (337)
Q Consensus       207 a~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~---------------G~~v~~~--~t~~h~v~V~~~~~~~~~~~~~~  269 (337)
                      ..++.     ..+.+.++..+|++.+++.|.+.               |+++...  .....++.+.+..   ....+.+
T Consensus       257 ~~~l~-----~l~~r~~~~~~n~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~l~~---~~~~~~~  328 (403)
T 3cog_A          257 NRGLK-----TLHVRMEKHFKNGMAVAQFLESNPWVEKVIYPGLPSHPQHELVKRQCTGCTGMVTFYIKG---TLQHAEI  328 (403)
T ss_dssp             HHHHT-----THHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESS---CHHHHHH
T ss_pred             Hhhhh-----HHHHHHHHHHHHHHHHHHHHhcCCCEEEEECCCCCCCCcHHHHHhcCCCCceEEEEEecC---CHHHHHH
Confidence            33332     23566788888999999988775               2222220  0125567776643   2356778


Q ss_pred             HHhhcCceecc
Q psy10669        270 VLEEIAIACNK  280 (337)
Q Consensus       270 ~L~~~gI~v~~  280 (337)
                      .|++.||.+..
T Consensus       329 ~l~~~~i~~~~  339 (403)
T 3cog_A          329 FLKNLKLFTLA  339 (403)
T ss_dssp             HHHHCSSSEEC
T ss_pred             HHHhCCcceEc
Confidence            88888887653

>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}

Probab=98.77  E-value=9.2e-08  Score=93.30  Aligned_cols=190  Identities=14%  Similarity=0.133  Sum_probs=113.5

Q ss_pred             eeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHH
Q psy10669         34 ELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVC  113 (337)
Q Consensus        34 ~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~  113 (337)
                      ....|-.|..+...++.. .+.++. .++.-.|+  ++...+++|    +++++++|.+.     .+.+.||+.|+..++
T Consensus        47 pi~~s~t~~~~~~~~~~~-~~~~~~-~~~~y~r~--~~p~~~~l~----~~la~~~g~~~-----~~~~~sG~~Ai~~al  113 (414)
T 3ndn_A           47 AMYLTSGYVYGSAAVAEK-SFAGEL-DHYVYSRY--GNPTVSVFE----ERLRLIEGAPA-----AFATASGMAAVFTSL  113 (414)
T ss_dssp             CBCCCSBBCCSSHHHHHH-HHTTSS-CCCCBTTT--CCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHH
T ss_pred             CcccCCceecCChHHHHH-HHhCCc-CCcCcCCC--CChHHHHHH----HHHHHHHCCCc-----EEEECCHHHHHHHHH
Confidence            456666666554433332 222221 12222232  345556776    57889999864     588889999998888


Q ss_pred             HhhCCc----------------------------------------ccc---cccEEEEc-Ccc-cccccChHHHHHHhh
Q psy10669        114 EKALPT----------------------------------------NNA---RFDFLSSG-TTC-YSRCLDYARFRQICD  148 (337)
Q Consensus       114 ~aLl~~----------------------------------------~~a---~pklII~~-~S~-~~~~~d~~~l~eia~  148 (337)
                      .+++++                                        +.+   ++++|++. .++ .+...|+++|.++|+
T Consensus       114 ~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~ai~~~t~~v~le~p~NptG~~~~l~~i~~la~  193 (414)
T 3ndn_A          114 GALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDGDDLSQWERALSVPTQAVFFETPSNPMQSLVDIAAVTELAH  193 (414)
T ss_dssp             HTTCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTCHHHHHHHTSSCCSEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred             HHHhCCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCCCCHHHHHHhcCCCCeEEEEECCCCCCCccccHHHHHHHHH
Confidence            998765                                        101   26888775 322 357889999999999


Q ss_pred             hcCCeEEEeccccccccc-----e---eeeec-c--------CCchhhh--hH-HHHHhhccCCCCCCCCcHHHHHHHHH
Q psy10669        149 ETDSIMFADMSHISGLIA-----G---VKGVT-K--------TGEKILY--DY-EEKINNAVFPSLQGGPHNHAIGAIAT  208 (337)
Q Consensus       149 ~~ga~l~vD~AH~~Gli~-----g---~~~T~-~--------~Gg~i~~--~l-~~~i~~~~~p~~~g~~~~~~iaala~  208 (337)
                      ++|++|++|++|..|...     |   ++.+. |        .||+++.  +. .+.+.... .. .|+...+..++++ 
T Consensus       194 ~~g~~livDe~~~~~~~~~~~~~g~div~~S~sK~l~~~G~~~~G~vv~~~~~~~~~l~~~~-~~-~g~~~~~~~a~~~-  270 (414)
T 3ndn_A          194 AAGAKVVLDNVFATPLLQQGFPLGVDVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLM-RH-TGPAMSAFNAWVL-  270 (414)
T ss_dssp             HTTCEEEEECTTTHHHHCCCGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHTTHHHHHH-HH-HCCCCCHHHHHHH-
T ss_pred             HcCCEEEEECCCcccccCCchhcCCCeEeccCCccccCCCCceEEEEEECHHHHHHHHHHHH-HH-cCCCCCHHHHHHH-
Confidence            999999999999987643     1   23322 2        1466654  22 22333211 11 1222223223222 


Q ss_pred             HHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCE
Q psy10669        209 AMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYH  242 (337)
Q Consensus       209 a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~  242 (337)
                       +..+  .....+.++..+|++++++.|.+. ++.
T Consensus       271 -~~~l--~~l~~r~~~~~~~a~~l~~~L~~~p~v~  302 (414)
T 3ndn_A          271 -LKGL--ETLAIRVQHSNASAQRIAEFLNGHPSVR  302 (414)
T ss_dssp             -HHHG--GGHHHHHHHHHHHHHHHHHHHHTCTTEE
T ss_pred             -HHHH--HHHHHHHHHHHHHHHHHHHHHhcCCCEe
Confidence             2222  245677888999999999999874 443

>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*

Probab=98.77  E-value=6.1e-07  Score=86.89  Aligned_cols=155  Identities=8%  Similarity=-0.038  Sum_probs=96.3

Q ss_pred             ccEEEEcCc--c-cccccChH---HHHHHhhhcCCeEEEeccccccccc----------------eeeeeccC----C--
Q psy10669        124 FDFLSSGTT--C-YSRCLDYA---RFRQICDETDSIMFADMSHISGLIA----------------GVKGVTKT----G--  175 (337)
Q Consensus       124 pklII~~~S--~-~~~~~d~~---~l~eia~~~ga~l~vD~AH~~Gli~----------------g~~~T~~~----G--  175 (337)
                      +++|++.++  + .+...+.+   +|.++|+++|+++++|++|.-....                .+.+|..|    |  
T Consensus       191 ~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~~GlR  270 (425)
T 2r2n_A          191 PKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIISSGLR  270 (425)
T ss_dssp             CSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTTCSTTC
T ss_pred             ceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCcccccCCCCCCCCccccCCCCCEEEEccchhhccCccc
Confidence            678876432  2 24666666   6778899999999999999732221                12233322    3  


Q ss_pred             -chhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhc----hhhHHHHHHHHHHHHHHHHHHHhC--CCEEecC
Q psy10669        176 -EKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQS----DEFKSYQAQVKANASHLSDEMIKR--GYHVVTG  246 (337)
Q Consensus       176 -g~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~----~~~~~y~~~v~~na~~l~~~L~~~--G~~v~~~  246 (337)
                       |+++.  ++.+.+...... ...+++.+..+++..++..+..    ...++.++++.++.++|.+.|.+.  |+..+..
T Consensus       271 iG~~~~~~~l~~~l~~~~~~-~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~  349 (425)
T 2r2n_A          271 IGFLTGPKPLIERVILHIQV-STLHPSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHV  349 (425)
T ss_dssp             CEEEEEEHHHHHHHHHHHHT-TTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECC
T ss_pred             eEEEecCHHHHHHHHHHHHH-hcCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeC
Confidence             66654  566655543222 2235666777777776665321    223456677788888899999874  7742222


Q ss_pred             CCCCeEEEEEecCCCcchHH-HHHHHhhcCceecc
Q psy10669        247 GTDVHLILIDLRKNKLTGSK-VELVLEEIAIACNK  280 (337)
Q Consensus       247 ~t~~h~v~V~~~~~~~~~~~-~~~~L~~~gI~v~~  280 (337)
                      ...+..+++++.... +..+ +.+.|.+.||.+.+
T Consensus       350 p~~g~~~~~~~~~~~-~~~~~~~~~l~~~gv~v~p  383 (425)
T 2r2n_A          350 PAAGMFLWIKVKGIN-DVKELIEEKAVKMGVLMLP  383 (425)
T ss_dssp             CSBSSEEEEEETTCS-CCHHHHHTHHHHTTEECEE
T ss_pred             CCceEEEEEEeCCCC-CHHHHHHHHHHHCCcEEec
Confidence            345567788886533 4444 57788888999875

>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*

Probab=98.23  E-value=9.2e-10  Score=105.48  Aligned_cols=235  Identities=12%  Similarity=0.090  Sum_probs=139.7

Q ss_pred             cceeeeccCCC--CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcC--CCCCCCcceeecCCC-
Q psy10669         31 NGIELIASENF--TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFN--LDPEQWGCNVQPYSG-  105 (337)
Q Consensus        31 ~~i~l~asen~--~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg--~~~~~~~~~v~~~Sg-  105 (337)
                      ..|.|...++-  .+|.+.+++...+.+. ..+++     .+   ..+++....+.+.+.+|  .+.    .+|.+++| 
T Consensus        32 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~-----~~---~~~l~~~la~~l~~~~g~~~~~----~~v~~~~g~   98 (392)
T 3b1d_A           32 QLLPAWIADMDFEVMPEVKQAIHDYAEQL-VYGYT-----YA---SDELLQAVLDWEKSEHQYSFDK----EDIVFVEGV   98 (392)
Confidence            44566555542  2788999887654321 11121     11   33454333344555556  333    24677666 


Q ss_pred             chhHHHHHHhhCCc------------------------------c-------c-----------ccccEEEEcCccc--c
Q psy10669        106 SPANFAVCEKALPT------------------------------N-------N-----------ARFDFLSSGTTCY--S  135 (337)
Q Consensus       106 t~AN~~v~~aLl~~------------------------------~-------~-----------a~pklII~~~S~~--~  135 (337)
                      ++|+..++.+++++                              .       .           .++++|++..-.+  +
T Consensus        99 ~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG  178 (392)
T 3b1d_A           99 VPAISIAIQAFTKEGEAVLINSPVYPPFARSVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGG  178 (392)
Confidence            67888888887543                              0       0           0156666642222  3


Q ss_pred             ccc---ChHHHHHHhhhcCCeEEEeccccccccce------------------eeeec-c-------CCchhhh---hHH
Q psy10669        136 RCL---DYARFRQICDETDSIMFADMSHISGLIAG------------------VKGVT-K-------TGEKILY---DYE  183 (337)
Q Consensus       136 ~~~---d~~~l~eia~~~ga~l~vD~AH~~Gli~g------------------~~~T~-~-------~Gg~i~~---~l~  183 (337)
                      ...   ++++|.++|+++|+++++|++|......+                  +.+|. |       +.|+++.   ++.
T Consensus       179 ~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~  258 (392)
T 3b1d_A          179 RVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENPTLC  258 (392)
Confidence            333   47788899999999999999998644321                  11222 2       1255554   266


Q ss_pred             HHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCEEecCCCCCeEEEEEecCCC
Q psy10669        184 EKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYHVVTGGTDVHLILIDLRKNK  261 (337)
Q Consensus       184 ~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~v~~~~t~~h~v~V~~~~~~  261 (337)
                      +.+.....+..++++++...++...++.+. ....++.++++.++.+.|.+.|.+.  |+++..+ ..+..+++++...+
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-~~~~~~~i~~~~~~  336 (392)
T 3b1d_A          259 AQFKHQQLVNNHHEVSSLGYIATETAYRYG-KPWLVALKAVLEENIQFAVEYFAQEAPRLKVMKP-QGTYLIWLDFSDYG  336 (392)
Confidence            666655444434456666666666666542 2345677888889999999998873  7877642 23344457776544


Q ss_pred             cchHHHHHHHh-hcCceecc
Q psy10669        262 LTGSKVELVLE-EIAIACNK  280 (337)
Q Consensus       262 ~~~~~~~~~L~-~~gI~v~~  280 (337)
                      .+..++.+.|. +.||.+.+
T Consensus       337 ~~~~~l~~~l~~~~gi~v~~  356 (392)
T 3b1d_A          337 LTDDALFTLLHDQAKVILNR  356 (392)
Confidence            45667777774 78999876

>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}

Probab=98.75  E-value=3.6e-07  Score=88.45  Aligned_cols=152  Identities=11%  Similarity=0.035  Sum_probs=93.4

Q ss_pred             ccEEEEcCccc---ccccC----hHHHHHHhhhcCCeEEEeccccccccc---------e----eeeecc------CCch
Q psy10669        124 FDFLSSGTTCY---SRCLD----YARFRQICDETDSIMFADMSHISGLIA---------G----VKGVTK------TGEK  177 (337)
Q Consensus       124 pklII~~~S~~---~~~~d----~~~l~eia~~~ga~l~vD~AH~~Gli~---------g----~~~T~~------~Gg~  177 (337)
                      +++||+.+ ++   +...+    +++|+++ +++|++|++|++|+ |+..         +    +.+..|      ..|+
T Consensus       200 ~~~vi~ep-~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~-g~~~g~~~~~~~~~~~~di~s~sK~l~~G~~~G~  276 (424)
T 2e7u_A          200 IAAIIFEP-VVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMT-GFRLAFGGATELLGLKPDLVTLGKILGGGLPAAA  276 (424)
T ss_dssp             EEEEEECS-SBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTT-TTTSSTTHHHHHHTCCCSEEEECGGGGTTSSCEE
T ss_pred             EEEEEEeC-CCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcc-ccccchhHHHHHhCCCcchhhhhhhhhCCcceEE
Confidence            35777764 43   34556    8889999 99999999999998 6521         1    111122      2344


Q ss_pred             hhh--hHHHHHhhcc--CCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC----CCEE-ecCCC
Q psy10669        178 ILY--DYEEKINNAV--FPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR----GYHV-VTGGT  248 (337)
Q Consensus       178 i~~--~l~~~i~~~~--~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~----G~~v-~~~~t  248 (337)
                      ++.  ++.+.+.+..  +-+..-+.++...++..+++..+.+  .+++.+++.++.++|.+.|.+.    |+.. +.  .
T Consensus       277 ~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~--~  352 (424)
T 2e7u_A          277 YAGRREIMEKVAPLGPVYQAGTLSGNPLAMAAGLATLELLEE--NPGYYAYLEDLGARLEAGLKEVLKEKGLPHTVN--R  352 (424)
T ss_dssp             EEECHHHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHHHHHHH--CTHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEE--E
T ss_pred             EEEcHHHHhhhcccCCcccCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHHHhCCCceEEE--e
Confidence            443  4555554311  1111224566666666666766532  3568889999999999999873    6531 22  2


Q ss_pred             CCeEEEEEecCCC------------cchHHHHHHHhhcCceeccCc
Q psy10669        249 DVHLILIDLRKNK------------LTGSKVELVLEEIAIACNKNT  282 (337)
Q Consensus       249 ~~h~v~V~~~~~~------------~~~~~~~~~L~~~gI~v~~~~  282 (337)
                      ...++++++....            ....++.+.|.+.||.+.+..
T Consensus       353 ~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~  398 (424)
T 2e7u_A          353 VGSMITVFFTEGPVVTFQDARRTDTELFKRFFHGLLDRGIYWPPSN  398 (424)
T ss_dssp             ETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHTTTEECCSSS
T ss_pred             eceEEEEEEeCCCCcchhhhcccCHHHHHHHHHHHHHCCeEEeccC
Confidence            3447788886421            124566777777899998643

>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*

Probab=98.74  E-value=4.1e-07  Score=86.97  Aligned_cols=160  Identities=13%  Similarity=0.109  Sum_probs=88.1

Q ss_pred             ccEEEEcCccc--ccccC---hHHHHHHhhhcCCeEEEeccccccccc-------------------eeeeec-c----C
Q psy10669        124 FDFLSSGTTCY--SRCLD---YARFRQICDETDSIMFADMSHISGLIA-------------------GVKGVT-K----T  174 (337)
Q Consensus       124 pklII~~~S~~--~~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~-------------------g~~~T~-~----~  174 (337)
                      +++|++..-++  ++..+   +++|.++|+++|+++++|++|.....+                   .+++|. |    .
T Consensus       176 ~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~  255 (401)
T 7aat_A          176 SIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAKNMGLY  255 (401)
T ss_dssp             CEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCG
T ss_pred             cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhcCCcEEEEecCCcccccc
Confidence            46666653333  34455   556668899999999999998643321                   122333 2    1


Q ss_pred             C---chhhh-----h----HHHHHhhccCCCCCCCCcHHHHHHHHHHHHH--H---hchhhHHHHHHHHHHHHHHHHHHH
Q psy10669        175 G---EKILY-----D----YEEKINNAVFPSLQGGPHNHAIGAIATAMLQ--A---QSDEFKSYQAQVKANASHLSDEMI  237 (337)
Q Consensus       175 G---g~i~~-----~----l~~~i~~~~~p~~~g~~~~~~iaala~a~~e--~---~~~~~~~y~~~v~~na~~l~~~L~  237 (337)
                      |   |+++.     +    +.+.+.....+... ++.....+..+.++..  +   .....++.++++.++.++|.+.|.
T Consensus       256 G~RiG~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~  334 (401)
T 7aat_A          256 GERAGAFTVICRDAEEAKRVESQLKILIRPMYS-NPPMNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLK  334 (401)
T ss_dssp             GGCEEEEEEECSSHHHHHHHHHHHHHHHHHHHS-SCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCceEEEEEEeCCHHHHHHHHHHHHHHHHhccC-CCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3   54321     2    33333332222222 2333322222222211  0   012346678888999999999999


Q ss_pred             hCC----CEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCcccchhhhhHh
Q psy10669        238 KRG----YHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNTGISLAAEIQA  292 (337)
Q Consensus       238 ~~G----~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~girig~~~~t  292 (337)
                      +.|    +++... ..+...+++     ++...+...|+++||.+.+  ++||+....|
T Consensus       335 ~~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~~ll~~~gi~v~~--~~Ris~~~~~  385 (401)
T 7aat_A          335 KEGSSHNWQHITD-QIGMFCFTG-----LKPEQVERLTKEFSIYMTK--DGRISVAGVA  385 (401)
T ss_dssp             HTTCCSCCHHHHH-CCSSEEECC-----CCHHHHHHHHHHHCEECCT--TCEEEGGGCC
T ss_pred             hcCCCCCCceecC-CcceEEecC-----CCHHHHHHHHHhCCEeccC--CCeEEeccCC
Confidence            876    444331 112233332     3467777777889999986  7898765433

>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}

Probab=98.73  E-value=6e-07  Score=88.88  Aligned_cols=159  Identities=13%  Similarity=0.080  Sum_probs=94.9

Q ss_pred             cEEEEcCcccccc---cC----hHHHHHHhhhcCCeEEEecccc-ccccc--------ee---eeec-c--CC-----ch
Q psy10669        125 DFLSSGTTCYSRC---LD----YARFRQICDETDSIMFADMSHI-SGLIA--------GV---KGVT-K--TG-----EK  177 (337)
Q Consensus       125 klII~~~S~~~~~---~d----~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g~---~~T~-~--~G-----g~  177 (337)
                      ++||+. .++++.   .+    +++|+++|+++|++||+|++|+ .|-.+        ++   ..|. |  .|     |+
T Consensus       225 aavi~e-pv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~a~~~~~v~pdi~t~sK~l~gg~~plG~  303 (472)
T 3hmu_A          225 AAFIAE-PVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGNWFGTQTMGIRPHIMTIAKGLSSGYAPIGG  303 (472)
T ss_dssp             EEEEEC-SSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEEEECGGGTTTSSCCEE
T ss_pred             EEEEEc-CccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCccchhHHhCCCCceeeechhhhcCCcceEE
Confidence            567775 465543   33    6789999999999999999997 44333        11   1122 2  12     23


Q ss_pred             hhh--hHHHHHhhc-cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHH-HHHHHHHHHHHhC----CCEEecCCCC
Q psy10669        178 ILY--DYEEKINNA-VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVK-ANASHLSDEMIKR----GYHVVTGGTD  249 (337)
Q Consensus       178 i~~--~l~~~i~~~-~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~-~na~~l~~~L~~~----G~~v~~~~t~  249 (337)
                      +++  ++.+.++.. ..-+.+-+.++...++..+++..+.+   +++.+++. ++.++|++.|++.    ++..+.  ..
T Consensus       304 v~~~~~i~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~---~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~vr--~~  378 (472)
T 3hmu_A          304 SIVCDEVAHVIGKDEFNHGYTYSGHPVAAAVALENLRILEE---ENILDHVRNVAAPYLKEKWEALTDHPLVGEAK--IV  378 (472)
T ss_dssp             EEEEHHHHHHHTTSCBCCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHTHHHHHHHHHHGGGGSTTEEEEE--EE
T ss_pred             EEECHHHHHhcccCCccccCCCCCCHHHHHHHHHHHHHHHH---hHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEE--ec
Confidence            333  576666422 11122334566676666666665532   36788888 9999999999763    122222  23


Q ss_pred             CeEEEEEecCCCc-----------chHHHHHHHhhcCceeccCc-ccchhhh
Q psy10669        250 VHLILIDLRKNKL-----------TGSKVELVLEEIAIACNKNT-GISLAAE  289 (337)
Q Consensus       250 ~h~v~V~~~~~~~-----------~~~~~~~~L~~~gI~v~~~~-girig~~  289 (337)
                      ..++.+.+.....           ....+.+.|.+.||.+.+.. -|||..+
T Consensus       379 G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g~~iRi~p~  430 (472)
T 3hmu_A          379 GMMASIALTPNKASRAKFASEPGTIGYICRERCFANNLIMRHVGDRMIISPP  430 (472)
T ss_dssp             TTEEEEEECSCGGGTCCBSSCTTHHHHHHHHHHHHTTBCCEEETTEEEECCC
T ss_pred             CceEEEEEecCccccccccchhHHHHHHHHHHHHHCCcEEEecCCEEEEECC
Confidence            3466676653210           14566777777899987643 5777543

>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}

Probab=98.72  E-value=3.4e-07  Score=89.28  Aligned_cols=162  Identities=13%  Similarity=0.065  Sum_probs=98.9

Q ss_pred             cEEEEcCcc--cccccC----hHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeecc--CCc-----hh
Q psy10669        125 DFLSSGTTC--YSRCLD----YARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTK--TGE-----KI  178 (337)
Q Consensus       125 klII~~~S~--~~~~~d----~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~--~Gg-----~i  178 (337)
                      ++|++.+..  .+...|    +++|+++|+++|++|++|++|+ .|..+        +    +.+..|  .||     ++
T Consensus       221 ~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~di~s~sK~l~~G~~~~G~~  300 (449)
T 3a8u_X          221 AAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSMFGADSFGVTPDLMCIAKQVTNGAIPMGAV  300 (449)
T ss_dssp             EEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEEECGGGGTTSSCCEEE
T ss_pred             EEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCcchhhhhcCCCCCEEEEcccccCCCCceEEE
Confidence            577776532  245667    8999999999999999999994 66432        1    111112  122     22


Q ss_pred             hh--hHHHHHhhcc--------CCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC-CEEec-C
Q psy10669        179 LY--DYEEKINNAV--------FPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG-YHVVT-G  246 (337)
Q Consensus       179 ~~--~l~~~i~~~~--------~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G-~~v~~-~  246 (337)
                      +.  ++.+.+....        .-+..-+.++...++...++..+.+   .++.+++.++.+++.+.|.+.+ +.++. .
T Consensus       301 ~~~~~~~~~l~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~  377 (449)
T 3a8u_X          301 IASTEIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALCLLQK---ENLVQSVAEVAPHFEKALHGIKGAKNVIDI  377 (449)
T ss_dssp             EEEHHHHHHHHTCSSCTTSCSSCCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHTTTTSTTEEEE
T ss_pred             EECHHHHHHhhccCcccccccccccCCCcccHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Confidence            32  5666665431        1111224566777777777766542   2578889999999999998743 33221 0


Q ss_pred             CCCCeEEEEEecCCC--c--chHHHHHHHhhcCceeccC-cccchhhh
Q psy10669        247 GTDVHLILIDLRKNK--L--TGSKVELVLEEIAIACNKN-TGISLAAE  289 (337)
Q Consensus       247 ~t~~h~v~V~~~~~~--~--~~~~~~~~L~~~gI~v~~~-~girig~~  289 (337)
                      .....++++++....  .  +..++.+.|.+.||.+.+. ..|||+.+
T Consensus       378 ~~~g~~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g~~iRis~~  425 (449)
T 3a8u_X          378 RNFGLAGAIQIAPRDGDAIVRPFEAGMALWKAGFYVRFGGDTLQFGPT  425 (449)
T ss_dssp             EEETTEEEEEECCBTTBSSHHHHHHHHHHHHHTEECEEETTEEEECCC
T ss_pred             eeeEEEEEEEEecCcccccccHHHHHHHHHHCCcEEecCCCEEEEECC
Confidence            124567788886432  1  1235677777779998763 25777643

>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}

Probab=98.71  E-value=1.6e-06  Score=83.84  Aligned_cols=151  Identities=17%  Similarity=0.163  Sum_probs=89.5

Q ss_pred             cEEEEcCcccc-ccc---C----hHHHHHHhhhcCCeEEEecccc-ccccc---------ee---eeec-c---CC----
Q psy10669        125 DFLSSGTTCYS-RCL---D----YARFRQICDETDSIMFADMSHI-SGLIA---------GV---KGVT-K---TG----  175 (337)
Q Consensus       125 klII~~~S~~~-~~~---d----~~~l~eia~~~ga~l~vD~AH~-~Gli~---------g~---~~T~-~---~G----  175 (337)
                      ++|++.+ +++ ..+   +    +++|+++|+++|++|++|++|. .|-.+         ++   ..|. |   .|    
T Consensus       192 ~~vi~~p-~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~~~~~~~~~~~~di~t~sK~l~~G~~r~  270 (430)
T 3i4j_A          192 AAFMAEP-VVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSPLALSRWSGVTPDIAVLGKGLAAGYAPL  270 (430)
T ss_dssp             EEEEECS-SCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTTCCCSEEEECGGGTTTSSCC
T ss_pred             EEEEEcC-cccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhhhhcCCCCcEEEEcccccCCcccc
Confidence            5677764 445 322   2    6789999999999999999997 33221         10   1121 2   13    


Q ss_pred             chhhh--hHHHHHhhc---cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-----CCEEec
Q psy10669        176 EKILY--DYEEKINNA---VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-----GYHVVT  245 (337)
Q Consensus       176 g~i~~--~l~~~i~~~---~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-----G~~v~~  245 (337)
                      |+++.  ++.+.+.+.   ..-+...+.++...++..+++..+.+   +++.+++.++.+++++.|.+.     ++..+.
T Consensus       271 G~~~~~~~i~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  347 (430)
T 3i4j_A          271 AGLLAAPQVYETVMGGSGAFMHGFTYAGHPVSVAAGLSVLDIVER---EDLTGAAKERGAQLLAGLQALQARFPQMMQVR  347 (430)
T ss_dssp             EEEEECHHHHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEE
T ss_pred             EEEEECHHHHHHHhccCCcccccCCCCCCHHHHHHHHHHHHHHHc---ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEEE
Confidence            45554  577766653   11122234566677776666766532   467888888888888888763     344333


Q ss_pred             CCCCCeEEEEEecCCC--------cchHHHHHHHhhcCceeccC
Q psy10669        246 GGTDVHLILIDLRKNK--------LTGSKVELVLEEIAIACNKN  281 (337)
Q Consensus       246 ~~t~~h~v~V~~~~~~--------~~~~~~~~~L~~~gI~v~~~  281 (337)
                        ....++.+.+.+..        ....++.+.|.+.||.+.+.
T Consensus       348 --~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~  389 (430)
T 3i4j_A          348 --GTGLLLGVVLGDLATGQAFETPGIASRIGAAALKRGLITYPG  389 (430)
T ss_dssp             --EETTEEEEEEC------------CHHHHHHHHHHTTEECC--
T ss_pred             --EEEEEEEEEeccccccCCCccHHHHHHHHHHHHhCCCEEEec
Confidence              23446667664211        12356777787889999864

>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*

Probab=98.71  E-value=1.6e-06  Score=84.09  Aligned_cols=155  Identities=12%  Similarity=0.099  Sum_probs=91.1

Q ss_pred             ccEEEEcCcccc---cccC----hHHHHHHhhhcCCeEEEeccccccccc---------ee---eeec-c------CCch
Q psy10669        124 FDFLSSGTTCYS---RCLD----YARFRQICDETDSIMFADMSHISGLIA---------GV---KGVT-K------TGEK  177 (337)
Q Consensus       124 pklII~~~S~~~---~~~d----~~~l~eia~~~ga~l~vD~AH~~Gli~---------g~---~~T~-~------~Gg~  177 (337)
                      +++||+.+ +++   ...+    +++|+++|+++|++|++|++|. |+..         ++   ..|. |      ..|+
T Consensus       201 ~~~vi~ep-~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~-g~~~g~~~~~~~~~~~~di~t~sK~~~~G~~iG~  278 (429)
T 3k28_A          201 IACVIVEP-VAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMT-GFRVAYNCGQGYYGVTPDLTCLGKVIGGGLPVGA  278 (429)
T ss_dssp             EEEEEECS-SBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTT-TTTSSTTHHHHHHTCCCSEEEECGGGGTTSCCEE
T ss_pred             EEEEEEcC-CCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccc-ccccCcchHHHHhCCCCceehhhhhhcCCCCeEE
Confidence            35777764 443   3444    7889999999999999999995 4311         10   1121 2      1234


Q ss_pred             hhh--hHHHHHhhc--cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC----CC-EEecCCC
Q psy10669        178 ILY--DYEEKINNA--VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR----GY-HVVTGGT  248 (337)
Q Consensus       178 i~~--~l~~~i~~~--~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~----G~-~v~~~~t  248 (337)
                      +++  ++.+.+.+.  .+.+...+.++...++..+++..+ +   ++..+++.++.++|.+.|.+.    ++ ..+.  .
T Consensus       279 ~~~~~~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~-~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~--~  352 (429)
T 3k28_A          279 YGGKAEIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQL-T---PESYVEFERKAEMLEAGLRKAAEKHGIPHHIN--R  352 (429)
T ss_dssp             EEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTC-C---HHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEE--E
T ss_pred             EEEcHHHHhhhccCCCccccCCCCCChHHHHHHHHHHHHH-H---HHHHHHHHHHHHHHHHHHHHHHhhCCCCEEEE--e
Confidence            333  455544431  122223355666666666666544 2   578889999999999988873    22 1111  2


Q ss_pred             CCeEEEEEecCCCc------------chHHHHHHHhhcCceeccCc--ccch
Q psy10669        249 DVHLILIDLRKNKL------------TGSKVELVLEEIAIACNKNT--GISL  286 (337)
Q Consensus       249 ~~h~v~V~~~~~~~------------~~~~~~~~L~~~gI~v~~~~--giri  286 (337)
                      ...++.+.+.....            ...++.+.|.+.||.+.+..  .+|+
T Consensus       353 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~r~  404 (429)
T 3k28_A          353 AGSMIGIFFTDEPVINYDAAKSSNLQFFAAYYREMVEQGVFLPPSQFEGLFL  404 (429)
T ss_dssp             ETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHHTTEECCSSTTSCBCC
T ss_pred             eccEEEEEEecCCcccccccccccHHHHHHHHHHHHHCCeEEecCCCCCEEE
Confidence            33355565533211            13566677777899998743  5666

>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*

Probab=98.71  E-value=1.5e-06  Score=84.96  Aligned_cols=160  Identities=18%  Similarity=0.139  Sum_probs=94.0

Q ss_pred             cEEEEcCccc-ccc---cC----hHHHHHHhhhcCCeEEEecccc-ccccc--------ee---eeec-c--CCch----
Q psy10669        125 DFLSSGTTCY-SRC---LD----YARFRQICDETDSIMFADMSHI-SGLIA--------GV---KGVT-K--TGEK----  177 (337)
Q Consensus       125 klII~~~S~~-~~~---~d----~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g~---~~T~-~--~Gg~----  177 (337)
                      ++||+.+ ++ ++.   .+    +++|+++|+++|++||+|++|+ .|-.+        ++   ..|. |  .||+    
T Consensus       212 a~vi~ep-~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~~~di~t~sK~l~~G~~~ig  290 (448)
T 3dod_A          212 AALSIES-MVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMFACEHENVQPDLMAAGKGITGGYLPIA  290 (448)
T ss_dssp             EEEEEES-SEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTTSSCCE
T ss_pred             EEEEEeC-cccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchhhhhhcCCCCCEEEecccccCCcCceE
Confidence            5677764 44 333   23    7889999999999999999997 43222        11   1121 2  1343    


Q ss_pred             -hhh--hHHHHHhhc------cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-CCCEEec-C
Q psy10669        178 -ILY--DYEEKINNA------VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-RGYHVVT-G  246 (337)
Q Consensus       178 -i~~--~l~~~i~~~------~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~G~~v~~-~  246 (337)
                       ++.  ++.+.+...      ...+...+.++...++..+++..+.+   +++.+++.++.+++++.|.+ .++..+. .
T Consensus       291 ~v~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~  367 (448)
T 3dod_A          291 VTFATEDIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLALFES---ENIVEQVAEKSKKLHFLLQDLHALPHVGDI  367 (448)
T ss_dssp             EEEEEHHHHHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHTTSTTEEEE
T ss_pred             EEEECHHHHHHhhhccccCCcccccCCCCcCHHHHHHHHHHHHHHhc---ccHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Confidence             333  566665540      12222334566677776677766532   35678888899999888876 2222111 0


Q ss_pred             CCCCeEEEEEecCCCcc----------hHHHHHHHhhcCceeccCc-ccchhh
Q psy10669        247 GTDVHLILIDLRKNKLT----------GSKVELVLEEIAIACNKNT-GISLAA  288 (337)
Q Consensus       247 ~t~~h~v~V~~~~~~~~----------~~~~~~~L~~~gI~v~~~~-girig~  288 (337)
                      .....++.+.+....-+          +.++.+.|.+.||.+.+.. .|||..
T Consensus       368 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~iRi~~  420 (448)
T 3dod_A          368 RQLGFMCGAELVRSKETKEPYPADRRIGYKVSLKMRELGMLTRPLGDVIAFLP  420 (448)
T ss_dssp             EEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECCEETTEEEECC
T ss_pred             EeeeEEEEEEEccCcccccccchhhHHHHHHHHHHHHCCcEEeccCCEEEEEC
Confidence            12344666777542211          3567777777899997643 577753

>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}

Probab=98.71  E-value=5.3e-07  Score=87.26  Aligned_cols=153  Identities=9%  Similarity=0.040  Sum_probs=91.8

Q ss_pred             cEEEEcCccc--ccccC----hHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeecc---CC----chh
Q psy10669        125 DFLSSGTTCY--SRCLD----YARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTK---TG----EKI  178 (337)
Q Consensus       125 klII~~~S~~--~~~~d----~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~---~G----g~i  178 (337)
                      ++|++.+.+.  +...+    +++|.++|+++|++|++|++|. .|-.+        +    +.+..|   .|    |++
T Consensus       214 ~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~~~~~~~~~~~d~~t~sK~~~~G~~riG~~  293 (419)
T 2eo5_A          214 AGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKLFAIENFNTVPDVITLAKALGGGIMPIGAT  293 (419)
T ss_dssp             EEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTTTSCCEEE
T ss_pred             EEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcchhhHHhcCCCCCEEEecccccCCccceEEE
Confidence            4777765322  33344    7889999999999999999997 54332        1    111112   13    444


Q ss_pred             hh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEE
Q psy10669        179 LY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILID  256 (337)
Q Consensus       179 ~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~  256 (337)
                      +.  ++. .+ .....+ .-+.++..+++...++..+.     +..+++.++.++|.+.|.+. +..+.  ....+++++
T Consensus       294 ~~~~~~~-~~-~~~~~~-t~~~n~~~~~aa~aal~~~~-----~~~~~~~~~~~~l~~~L~~~-~~~~~--~~g~~~~i~  362 (419)
T 2eo5_A          294 IFRKDLD-FK-PGMHSN-TFGGNALACAIGSKVIDIVK-----DLLPHVNEIGKIFAEELQGL-ADDVR--GIGLAWGLE  362 (419)
T ss_dssp             EEEGGGC-CC--------CCCCCHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHTTS-SSEEE--EETTEEEEE
T ss_pred             EEchHhh-cC-CcccCC-CCCCCHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHh-hhheE--eeeEEEEEE
Confidence            43  343 33 211222 22457777777777776542     27888999999999999876 33232  345567777


Q ss_pred             ecCCCcchHHHHHHHhhcCceeccCc--ccchhhh
Q psy10669        257 LRKNKLTGSKVELVLEEIAIACNKNT--GISLAAE  289 (337)
Q Consensus       257 ~~~~~~~~~~~~~~L~~~gI~v~~~~--girig~~  289 (337)
                      +...+.... +.+.|.+.||.+.+..  .+||..+
T Consensus       363 ~~~~~~~~~-~~~~l~~~Gv~v~~~~~~~lRis~~  396 (419)
T 2eo5_A          363 YNEKKVRDR-IIGESFKRGLLLLPAGRSAIRVIPP  396 (419)
T ss_dssp             CSCHHHHHH-HHHHHHHTTEECEEETTTEEEECCC
T ss_pred             EecCccHHH-HHHHHHHCCCEEecCCCCEEEEECC
Confidence            742111244 6677778899998642  5788533

>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}

Probab=98.68  E-value=9.9e-07  Score=87.01  Aligned_cols=146  Identities=16%  Similarity=0.180  Sum_probs=97.7

Q ss_pred             EEEEcCcccc--cccChHHHHHHhhhcCCeEEEeccccccccc----------------eeeeecc-----CCc-hhhh-
Q psy10669        126 FLSSGTTCYS--RCLDYARFRQICDETDSIMFADMSHISGLIA----------------GVKGVTK-----TGE-KILY-  180 (337)
Q Consensus       126 lII~~~S~~~--~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~----------------g~~~T~~-----~Gg-~i~~-  180 (337)
                      +|+.+.+.|.  ...|+++|.+||+++|++++||+||++=+.-                .++|+||     .|| +++. 
T Consensus       219 ~V~~Ttt~y~p~~~ddI~eIaeIch~~gIpllVDeAhGah~~~~~~lp~sA~~~GrAD~vVqS~HK~llvpIGG~ii~~~  298 (501)
T 3hl2_A          219 CIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGF  298 (501)
T ss_dssp             EEEEECSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHHHHHHSCCCEEEEEHHHHHCCCSSCEEEEES
T ss_pred             EEEecCCCCCCcccccHHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHHHHHhcCCCcEEEecccccceeecCceEEEeC
Confidence            3334455664  5589999999999999999999999874321                2567764     355 4433 


Q ss_pred             --hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh----CCCEEecCCCC-CeEE
Q psy10669        181 --DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK----RGYHVVTGGTD-VHLI  253 (337)
Q Consensus       181 --~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~----~G~~v~~~~t~-~h~v  253 (337)
                        ++.+++.. .+|+.+++   ...+.+.++++++-...|++..++-.+|+++|++.|++    .|-++..  |. |+|-
T Consensus       299 d~e~l~~~~~-~yPGr~S~---Spsldl~~tLL~lGr~Gy~~ll~e~~ela~~L~~~L~~la~~~ge~ll~--~~~n~is  372 (501)
T 3hl2_A          299 NDSFIQEISK-MYPGRASA---SPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKKLSEAYNERLLH--TPHNPIS  372 (501)
T ss_dssp             CHHHHHHHHH-TSCSCBCS---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCBCC--CTTCSSE
T ss_pred             CHHHHHHHHH-hCCCCCCC---cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhcC--CCCCcee
Confidence              45555543 57877643   44555666777777788899999999999999999998    5767764  43 5543


Q ss_pred             -EEEecCCC----cchHHHHHHHhhcCce
Q psy10669        254 -LIDLRKNK----LTGSKVELVLEEIAIA  277 (337)
Q Consensus       254 -~V~~~~~~----~~~~~~~~~L~~~gI~  277 (337)
                       -+.+...+    .+.-++...|...+|.
T Consensus       373 ~a~tl~~~~~~~~~~~t~~gs~Lf~r~vs  401 (501)
T 3hl2_A          373 LAMTLKTLDEHRDKAVTQLGSMLFTRQVS  401 (501)
T ss_dssp             EEEECTTSCTTTSCHHHHHHHHHHHTTCC
T ss_pred             EEEecccccccccccHHHHHHHHHhcCCC
Confidence             33343321    1234556666654443

>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}

Probab=98.68  E-value=1.3e-06  Score=84.69  Aligned_cols=154  Identities=8%  Similarity=0.026  Sum_probs=91.2

Q ss_pred             ccEEEEcCcccc---cccC----hHHHHHHhhhcCCeEEEecccc---ccccc-----e----eeeecc------CCchh
Q psy10669        124 FDFLSSGTTCYS---RCLD----YARFRQICDETDSIMFADMSHI---SGLIA-----G----VKGVTK------TGEKI  178 (337)
Q Consensus       124 pklII~~~S~~~---~~~d----~~~l~eia~~~ga~l~vD~AH~---~Gli~-----g----~~~T~~------~Gg~i  178 (337)
                      +++|++.+ +++   ...+    +++|+++|+++|++|++|++|+   .|-..     +    +.+..|      ..|++
T Consensus       201 ~~~vi~ep-~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~r~g~~~~~~~~~~~pdi~t~sK~~~~G~~~G~~  279 (429)
T 4e77_A          201 VACIIVEP-VAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGFRVALAGAQDYYHVIPDLTCLGKIIGGGMPVGAF  279 (429)
T ss_dssp             EEEEEECS-SBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBTTTBTTCHHHHTTCCCSEEEEEGGGGTTSCCEEE
T ss_pred             EEEEEECC-ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcccCcchHHHhcCCCCCeeeecccccCCCCeEEE
Confidence            36777764 443   3444    7889999999999999999998   22111     1    111112      23444


Q ss_pred             hh--hHHHHHhhc--cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC----CCEEecCCCCC
Q psy10669        179 LY--DYEEKINNA--VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR----GYHVVTGGTDV  250 (337)
Q Consensus       179 ~~--~l~~~i~~~--~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~----G~~v~~~~t~~  250 (337)
                      +.  ++.+.+.+.  .+-+..-+.++...++...++..+.+   +++.+++.++.+++++.|.+.    ++..... ...
T Consensus       280 ~~~~~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~-~~g  355 (429)
T 4e77_A          280 GGRREVMNALAPTGPVYQAGTLSGNPIAMAAGFACLTEISQ---VGVYETLTELTDSLATGLRHAAKEENIPLVVN-HVG  355 (429)
T ss_dssp             EECHHHHTTBTTTSSBCC--CCCCCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEE-EET
T ss_pred             EECHHHHHHhccCCCccccCCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCceEEE-Eee
Confidence            43  455544432  11111225677777777777776632   467888888888888888762    4432111 234


Q ss_pred             eEEEEEecCCC-------------cchHHHHHHHhhcCceeccCc
Q psy10669        251 HLILIDLRKNK-------------LTGSKVELVLEEIAIACNKNT  282 (337)
Q Consensus       251 h~v~V~~~~~~-------------~~~~~~~~~L~~~gI~v~~~~  282 (337)
                      .++.+.+....             ....++.+.|.+.||.+.+..
T Consensus       356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~  400 (429)
T 4e77_A          356 GMFGLFFTNADTVTCYQDVMNCDVERFKRFFHLMLEEGVYLAPSA  400 (429)
T ss_dssp             TEEEEECCSSSCCCSHHHHHTSCHHHHHHHHHHHHHTTEECCSST
T ss_pred             eEEEEEEccCcccccccccccccHHHHHHHHHHHHHCCeEEeecC
Confidence            46667665431             112566677777799998754

>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}

Probab=98.66  E-value=4.7e-07  Score=88.43  Aligned_cols=150  Identities=8%  Similarity=-0.031  Sum_probs=89.9

Q ss_pred             ccEEEEcCccc--ccccC----hHHHHHHhhhcCCeEEEeccccccccc---------e----eeeecc------CCchh
Q psy10669        124 FDFLSSGTTCY--SRCLD----YARFRQICDETDSIMFADMSHISGLIA---------G----VKGVTK------TGEKI  178 (337)
Q Consensus       124 pklII~~~S~~--~~~~d----~~~l~eia~~~ga~l~vD~AH~~Gli~---------g----~~~T~~------~Gg~i  178 (337)
                      +++|++.+...  +...+    +++|+++|+++|++|++|++|+ |+..         +    +.+..|      .+|++
T Consensus       202 ~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~~~g~~~~~~~~~~~~di~s~sK~l~~G~~~G~v  280 (453)
T 2cy8_A          202 IAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVIS-GFRVGNHGMQALLDVQPDLTCLAKASAGGLPGGIL  280 (453)
T ss_dssp             EEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTT-TTTTCTTHHHHHHTCCCSEEEEEGGGGTTSSCEEE
T ss_pred             EEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcc-ccccCchhhhHHhCCCCcEEEEChhhhCCcceEEE
Confidence            35777765322  44556    8899999999999999999997 6621         1    111112      23444


Q ss_pred             hh--hHHHHHhh---c-cCCCCCCCCcHHHHHHHHHHHHH-HhchhhHHHHHHHHHHHHHHHHHHHhC----CCEE-ecC
Q psy10669        179 LY--DYEEKINN---A-VFPSLQGGPHNHAIGAIATAMLQ-AQSDEFKSYQAQVKANASHLSDEMIKR----GYHV-VTG  246 (337)
Q Consensus       179 ~~--~l~~~i~~---~-~~p~~~g~~~~~~iaala~a~~e-~~~~~~~~y~~~v~~na~~l~~~L~~~----G~~v-~~~  246 (337)
                      +.  ++.+.+..   . .+-+..-+.++...++...++.. + .   +++.+++.++.++|.+.|.+.    ++.. +. 
T Consensus       281 ~~~~~~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal~~~~-~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~-  355 (453)
T 2cy8_A          281 GGREDVMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAIDTIL-E---DDVCAKINDLGQFAREAMNHLFARKGLNWLAY-  355 (453)
T ss_dssp             EECHHHHTTSSSCC---------CCCCHHHHHHHHHHHHHHH-H---TTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEE-
T ss_pred             echHHHHHHhccccCCCceeCCCCCCCHHHHHHHHHHHHHHh-h---hhHHHHHHHHHHHHHHHHHHHHhhCCCcEEEE-
Confidence            44  45444443   1 11111224566667776666665 4 2   346778888899998888763    5422 22 


Q ss_pred             CCCCeEEEEEecC-----C-------------CcchHHHHHHHhhcCceecc
Q psy10669        247 GTDVHLILIDLRK-----N-------------KLTGSKVELVLEEIAIACNK  280 (337)
Q Consensus       247 ~t~~h~v~V~~~~-----~-------------~~~~~~~~~~L~~~gI~v~~  280 (337)
                       ....++++.+..     .             .....++.+.|.+.||.+.+
T Consensus       356 -~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gv~v~~  406 (453)
T 2cy8_A          356 -GRFSGFHLMPGLPPNTTDTGSITRAEVARPDVKMIAAMRMALILEGVDIGG  406 (453)
T ss_dssp             -CCTTEEEEEETSCTTCCCCHHHHTTCSCCCCHHHHHHHHHHHHHTTEECBT
T ss_pred             -EeeeEEEEEEeccccccccccccccccccccHHHHHHHHHHHHHCCeEEeC
Confidence             344577888864     1             11245677777778999954

>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*

Probab=98.65  E-value=2.1e-07  Score=90.27  Aligned_cols=154  Identities=16%  Similarity=0.031  Sum_probs=98.1

Q ss_pred             ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc-------------------cc---------
Q psy10669         70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT-------------------NN---------  121 (337)
Q Consensus        70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~-------------------~~---------  121 (337)
                      ++....++|    +++++++|.+.     .+.++||+.|+.++ .+++++                   ..         
T Consensus        65 ~~p~~~~l~----~~la~l~g~~~-----~~~~~sG~~Ai~~~-~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~  134 (400)
T 3nmy_A           65 HNPTRFAYE----RCVAALEGGTR-----AFAFASGMAATSTV-MELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDF  134 (400)
T ss_dssp             CCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHH-HTTSCTTCEEEEESSCCHHHHHHHHHTHHHHHCCEE
T ss_pred             CCHHHHHHH----HHHHHHhCCCC-----EEEecCHHHHHHHH-HHHcCCCCEEEEeCCCchHHHHHHHHhhHhhcCeEE
Confidence            445556777    57889999874     68889999898874 666654                   00         


Q ss_pred             -------------c---cccEEEEc-Ccc-cccccChHHHHHHhhhcCCeEEEeccccccccc--------eeeee-cc-
Q psy10669        122 -------------A---RFDFLSSG-TTC-YSRCLDYARFRQICDETDSIMFADMSHISGLIA--------GVKGV-TK-  173 (337)
Q Consensus       122 -------------a---~pklII~~-~S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~--------g~~~T-~~-  173 (337)
                                   +   ++++|++. .++ .+...|+++|.++|+++|++|++|++|..|...        .++.+ +| 
T Consensus       135 ~~v~~~d~~~l~~~i~~~~~~v~~e~~~np~G~~~~l~~i~~la~~~g~~livDe~~~~~~~~~~~~~g~div~~S~sK~  214 (400)
T 3nmy_A          135 SFVDLTDPAAFKAAIRADTKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTVVDNTFASPMLQRPLSLGADLVVHSATKY  214 (400)
T ss_dssp             EEECTTSHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHCCGGGGTCSEEEEETTTT
T ss_pred             EEECCCCHHHHHHHhccCCCEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccCChhhcCCcEEEecCccc
Confidence                         0   25777775 222 357889999999999999999999999877643        12322 22 


Q ss_pred             -------CCc-hhh-h--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC
Q psy10669        174 -------TGE-KIL-Y--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR  239 (337)
Q Consensus       174 -------~Gg-~i~-~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~  239 (337)
                             .|| .++ .  ++.+.+..... ....+++ +.-++++  +..+  .....+.++..+|++++++.|.+.
T Consensus       215 l~g~g~~~gG~~vv~~~~~~~~~l~~~~~-~~g~~~~-~~~a~~~--l~~l--~~l~~r~~~~~~~a~~l~~~L~~~  285 (400)
T 3nmy_A          215 LNGHSDMVGGIAVVGDNAELAEQMAFLQN-SIGGVQG-PFDSFLA--LRGL--KTLPLRMRAHCENALALAQWLETH  285 (400)
T ss_dssp             TTCSSSCCCEEEEECSCHHHHHHHHHHHH-HHCCBCC-HHHHHHH--HHHH--TTHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             cCCCCCcceeEEEEeCCHHHHHHHHHHHH-hcCCCCC-HHHHHHH--HHhH--hHHHHHHHHHHHHHHHHHHHHHcC
Confidence                   256 443 2  45555443211 1111222 2222222  2222  235677888999999999999874

>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*

Probab=98.65  E-value=3.3e-07  Score=90.71  Aligned_cols=175  Identities=13%  Similarity=0.100  Sum_probs=104.4

Q ss_pred             CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeec-CCCchhHHHHHHhhC---C
Q psy10669         43 SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQP-YSGSPANFAVCEKAL---P  118 (337)
Q Consensus        43 ~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~-~Sgt~AN~~v~~aLl---~  118 (337)
                      +|.|.+|+...+.+-..       +..-+....+++    +++++.+..-.     .|+| .|||.||.+.+....   +
T Consensus       105 hp~v~~Av~~q~~~~~~-------~~~~~~~~~~la----e~l~~~~p~~~-----~v~f~~SGsEA~e~AiklAr~~tg  168 (454)
T 4ao9_A          105 APEIRDAVIEAMQGGIN-------LTGHNLLEGRLA----RLICERFPQIE-----QLRFTNSGTEANLMALTAALHFTG  168 (454)
T ss_dssp             CHHHHHHHHHHHHTCSC-------CCSEESSHHHHH----HHHHHHSTTCS-----EEEEESSHHHHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHhcCCC-------ccCCcHHHHHHH----HHHHHhCCCCC-----EEEEeCchHHHHHHHHHHHHhccc
Confidence            89999999876543111       111123333444    56777775332     3556 688999988876541   0


Q ss_pred             -c----------------------------------------c--ccc----ccEEEEcCccccccc---C----hHHHH
Q psy10669        119 -T----------------------------------------N--NAR----FDFLSSGTTCYSRCL---D----YARFR  144 (337)
Q Consensus       119 -~----------------------------------------~--~a~----pklII~~~S~~~~~~---d----~~~l~  144 (337)
                       +                                        +  +.+    ...||+. .+.++.+   +    ++.|+
T Consensus       169 r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~nd~~~l~~~l~~~~~~iAavIvE-Pv~g~~G~~~p~~~fL~~lr  247 (454)
T 4ao9_A          169 RRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPYNDAQTARAQIERHGPEIAVVLVE-PMQGASGCIPGQPDFLQALR  247 (454)
T ss_dssp             CCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECTTCHHHHHHHHHHTGGGEEEEEEC-SEESTTTCEECCHHHHHHHH
T ss_pred             CCeEEEEeCCcCCccccccccccCccCCCCcccCCCchHHHHHHHHhhcCCceEEEEec-cccCCCCccCCchhhHHHHH
Confidence             0                                        0  011    3567775 3554433   3    66799


Q ss_pred             HHhhhcCCeEEEeccccccccc--------ee----eeecc-------CCchhhh-hHHHHHhhccCCCCC-C--CCcHH
Q psy10669        145 QICDETDSIMFADMSHISGLIA--------GV----KGVTK-------TGEKILY-DYEEKINNAVFPSLQ-G--GPHNH  201 (337)
Q Consensus       145 eia~~~ga~l~vD~AH~~Gli~--------g~----~~T~~-------~Gg~i~~-~l~~~i~~~~~p~~~-g--~~~~~  201 (337)
                      +||+++|++||+|+.|+ |-.+        |+    +..+|       -|+++.. ++.+.+.+...|..+ +  +.|+.
T Consensus       248 ~lc~~~g~lLI~DEV~t-GR~G~~~a~e~~gv~PDi~t~gK~lggG~Piga~~~~~ei~~~~~~~~~~~~h~~T~~gnPl  326 (454)
T 4ao9_A          248 ESATQVGALLVFDEVMT-SRLAPHGLANKLGIRSDLTTLGKYIGGGMSFGAFGGRADVMALFDPRTGPLAHSGTFNNNVM  326 (454)
T ss_dssp             HHHHHHTCEEEEECTTG-GGGSTTCHHHHHTCCCSEEEEEGGGGTTSSCEEEEECHHHHGGGCTTTCSCCCCCTTTTCHH
T ss_pred             HHHhhcCCEEEEECCCc-CCCccccchhccCCCCcEEEeccccCCCCcceeeeeHHHHHHHHhhccCCccccCCCCCCHH
Confidence            99999999999999997 6444        11    11122       2333322 565655543222222 1  24566


Q ss_pred             HHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh
Q psy10669        202 AIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK  238 (337)
Q Consensus       202 ~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~  238 (337)
                      .+|+..+++..+.+   ++..+++.++.++|+++|++
T Consensus       327 a~AAala~L~~l~~---~~~~~~~~~~g~~l~~~L~~  360 (454)
T 4ao9_A          327 TMAAGYAGLTKLFT---PEAAGALAERGEALRARLNA  360 (454)
T ss_dssp             HHHHHHHHHHHTSC---HHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhc---cChhHHHHHHHHHHHHHHHH
Confidence            66666666666643   46678899999999999876

>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3

Probab=98.64  E-value=2.9e-07  Score=88.86  Aligned_cols=148  Identities=14%  Similarity=0.107  Sum_probs=96.9

Q ss_pred             HHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc--------------------------------c-----cc-
Q psy10669         81 AQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT--------------------------------N-----NA-  122 (337)
Q Consensus        81 ~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~--------------------------------~-----~a-  122 (337)
                      +++++++++|.+.     .+.++||+.||..++. ++++                                .     +. 
T Consensus        60 lr~~la~~~g~~~-----~i~~~sGt~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~l~~  133 (393)
T 1n8p_A           60 LERAVAALENAQY-----GLAFSSGSATTATILQ-SLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTNDLLNDLPQ  133 (393)
T ss_dssp             HHHHHHHHTTCSE-----EEEESCHHHHHHHHHH-TSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEESSHHHHHHH
T ss_pred             HHHHHHHHhCCCc-----EEEECChHHHHHHHHH-HcCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEeCCChHHHHH
Confidence            3468899999874     6899999999888888 7654                                0     00 


Q ss_pred             ----cccEEEEcCcc--cccccChHHHHHHhhhc----CCeEEEeccccccccc--------eeeeec-c----CC----
Q psy10669        123 ----RFDFLSSGTTC--YSRCLDYARFRQICDET----DSIMFADMSHISGLIA--------GVKGVT-K----TG----  175 (337)
Q Consensus       123 ----~pklII~~~S~--~~~~~d~~~l~eia~~~----ga~l~vD~AH~~Gli~--------g~~~T~-~----~G----  175 (337)
                          ++++|++..-+  .+...|+++|.++|+++    |+++++|++|..|...        .++++. |    .|    
T Consensus       134 ~i~~~t~lv~~~~~~nptG~~~~l~~i~~la~~~~~~~~~~livD~a~~~~~~~~~~~~~~di~~~S~sK~~g~~G~rig  213 (393)
T 1n8p_A          134 LIKENTKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLSPYISNPLNFGADIVVHSATKYINGHSDVVL  213 (393)
T ss_dssp             HSCSSEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTTCSSCCCC
T ss_pred             hcccCceEEEEECCCCCcceecCHHHHHHHHHHhCCCCCCEEEEeCCccccccCCHHHcCCeEEEEECcccccCCCCcee
Confidence                15777775322  35788999999999999    9999999999987653        233333 2    23    


Q ss_pred             chhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCC
Q psy10669        176 EKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG  240 (337)
Q Consensus       176 g~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G  240 (337)
                      |+++.   ++.+.+.....+ ..+++.+...+++..++     .......++..+|++.+++.|.+.+
T Consensus       214 G~~~~~~~~~~~~l~~~~~~-~g~~~~~~~~~~~~~~l-----~~~~~~~~~~~~~~~~l~~~L~~~~  275 (393)
T 1n8p_A          214 GVLATNNKPLYERLQFLQNA-IGAIPSPFDAWLTHRGL-----KTLHLRVRQAALSANKIAEFLAADK  275 (393)
T ss_dssp             EEEEESCHHHHHHHHHHHHH-HCCCCCHHHHHHHHHHH-----TTHHHHHHHHHHHHHHHHHHHTSCT
T ss_pred             EEEEeCCHHHHHHHHHHHHh-cCCCCCHHHHHHHHhcc-----chHHHHHHHHHHHHHHHHHHHHhCC
Confidence            76664   355555433221 11223322222222222     2345677888999999999998864

>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*

Probab=98.63  E-value=7.6e-07  Score=87.34  Aligned_cols=158  Identities=13%  Similarity=0.070  Sum_probs=91.1

Q ss_pred             cEEEEcCcccccc---cC----hHHHHHHhhhcCCeEEEecccc-ccccc--------ee---eeec-c--CC-----ch
Q psy10669        125 DFLSSGTTCYSRC---LD----YARFRQICDETDSIMFADMSHI-SGLIA--------GV---KGVT-K--TG-----EK  177 (337)
Q Consensus       125 klII~~~S~~~~~---~d----~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g~---~~T~-~--~G-----g~  177 (337)
                      ++||+.+ +++..   .+    +++|+++|+++|++||+|++|+ .|-.+        ++   ..|. |  .|     |+
T Consensus       221 ~~vi~ep-~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~~~~~~~~~pdi~t~sK~l~gg~~~lg~  299 (459)
T 4a6r_A          221 AAFVGEP-IQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEWFGHQHFGFQPDLFTAAKGLSSGYLPIGA  299 (459)
T ss_dssp             EEEEECS-SBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEEECGGGGTTSSCCEE
T ss_pred             EEEEECC-ccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCCeeehhhhhcCCCCCccc
Confidence            5677764 55443   33    6889999999999999999997 43332        11   1122 2  12     33


Q ss_pred             hhh--hHHHHHhhccCCC---CCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHH-HHHHHHHHHH-Hh-CC---CEEecC
Q psy10669        178 ILY--DYEEKINNAVFPS---LQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVK-ANASHLSDEM-IK-RG---YHVVTG  246 (337)
Q Consensus       178 i~~--~l~~~i~~~~~p~---~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~-~na~~l~~~L-~~-~G---~~v~~~  246 (337)
                      ++.  ++.+.+... .+.   ..-+.++...++..+++..+.+   +++.+++. ++.+++++.| .. .+   +..+. 
T Consensus       300 v~~~~~i~~~~~~~-~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-  374 (459)
T 4a6r_A          300 VFVGKRVAEGLIAG-GDFNHGFTYSGHPVCAAVAHANVAALRD---EGIVQRVKDDIGPYMQKRWRETFSRFEHVDDVR-  374 (459)
T ss_dssp             EEECHHHHHHHHHH-CTTHHHHHHCSCHHHHHHHHHHHHHHHH---TCHHHHHHHTHHHHHHHHHHHHHTTCTTEEEEE-
T ss_pred             eeeCHHHHHHhhcC-CCcccCCCCCCCHHHHHHHHHHHHHHhc---chHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEE-
Confidence            333  566655521 111   1224556666666666665532   35677788 8888888888 43 22   22222 


Q ss_pred             CCCCeEEEEEecCCCc----------chHHHHHHHhhcCceeccCc-ccchhhh
Q psy10669        247 GTDVHLILIDLRKNKL----------TGSKVELVLEEIAIACNKNT-GISLAAE  289 (337)
Q Consensus       247 ~t~~h~v~V~~~~~~~----------~~~~~~~~L~~~gI~v~~~~-girig~~  289 (337)
                       ...-++.+++....-          ...++.+.|.+.||.+.+.. .|||..+
T Consensus       375 -~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g~~iRi~~~  427 (459)
T 4a6r_A          375 -GVGMVQAFTLVKNKAKRELFPDFGEIGTLCRDIFFRNNLIMRACGDHIVSAPP  427 (459)
T ss_dssp             -EETTEEEEEECSBTTTTBCCSSTTHHHHHHHHHHHHTTEECEEETTEEEECCC
T ss_pred             -EEEEEEEEEEecCccccccccchHHHHHHHHHHHHHCCeEEecCCCEEEEECC
Confidence             223355666643211          15567777777899988643 5777644

>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*

Probab=98.63  E-value=5.7e-06  Score=79.91  Aligned_cols=153  Identities=12%  Similarity=0.044  Sum_probs=91.3

Q ss_pred             ccEEEEcCcccc---cccC----hHHHHHHhhhcCCeEEEeccccccccc---------e----eeeecc------CCch
Q psy10669        124 FDFLSSGTTCYS---RCLD----YARFRQICDETDSIMFADMSHISGLIA---------G----VKGVTK------TGEK  177 (337)
Q Consensus       124 pklII~~~S~~~---~~~d----~~~l~eia~~~ga~l~vD~AH~~Gli~---------g----~~~T~~------~Gg~  177 (337)
                      +++|++.+ .++   ...+    +++|+++|+++|++|++|++|+ |+..         +    +.+..|      ..|+
T Consensus       200 ~~~vi~~p-~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~-g~~~g~~~~~~~~~~~~di~t~sK~~~~G~~~G~  277 (427)
T 3fq8_A          200 IAGVILEP-IVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVIT-GFRIAYGGVQEKFGVTPDLTTLGKIIGGGLPVGA  277 (427)
T ss_dssp             EEEEEECS-SBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTT-BTTTBTTHHHHHTTCCCSEEEECGGGGTTSSCEE
T ss_pred             EEEEEEcC-CcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-ccccCcchhhHhcCCCCChhhhhhhhhCCcceEE
Confidence            46777764 443   3555    8899999999999999999997 5411         1    111112      1344


Q ss_pred             hhh--hHHHHHhhc--cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC----CCEEecCCCC
Q psy10669        178 ILY--DYEEKINNA--VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR----GYHVVTGGTD  249 (337)
Q Consensus       178 i~~--~l~~~i~~~--~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~----G~~v~~~~t~  249 (337)
                      ++.  ++.+.+.+.  .+-+..-+.++...++...++..+.+   +++.+++.++.+++.+.|.+.    ++..... ..
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~  353 (427)
T 3fq8_A          278 YGGKREIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQ---PGTYEYLDQITKRLSDGLLAIAQETGHAACGG-QV  353 (427)
T ss_dssp             EEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEE-EE
T ss_pred             EEEcHHHHHhhccCCCccccCCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEE-Ee
Confidence            443  455555432  11111223477777777777766533   467888888999988888763    3321110 23


Q ss_pred             CeEEEEEecCCCcc------------hHHHHHHHhhcCceeccCc
Q psy10669        250 VHLILIDLRKNKLT------------GSKVELVLEEIAIACNKNT  282 (337)
Q Consensus       250 ~h~v~V~~~~~~~~------------~~~~~~~L~~~gI~v~~~~  282 (337)
                      ..++.+.+......            ..++.+.|.+.||.+.+..
T Consensus       354 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gi~v~~~~  398 (427)
T 3fq8_A          354 SGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQGIYLAPSQ  398 (427)
T ss_dssp             TTEEEEESSSCCCCSHHHHTTSCHHHHHHHHHHHHHTTEECCSST
T ss_pred             eeEEEEEEecCccccccccccccHHHHHHHHHHHHHCCcEEecCC
Confidence            44566666443222            3466777777899998754

>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*

Probab=98.61  E-value=2.6e-06  Score=81.00  Aligned_cols=156  Identities=13%  Similarity=0.091  Sum_probs=89.0

Q ss_pred             cEEEEc-Ccc-cccccChH---HHHHHhhhcCCeEEEeccccccccc------------------eeeeec-c----CC-
Q psy10669        125 DFLSSG-TTC-YSRCLDYA---RFRQICDETDSIMFADMSHISGLIA------------------GVKGVT-K----TG-  175 (337)
Q Consensus       125 klII~~-~S~-~~~~~d~~---~l~eia~~~ga~l~vD~AH~~Gli~------------------g~~~T~-~----~G-  175 (337)
                      +++++. +.+ .++..+.+   +|.++|+++|+++++|++|.-...+                  .+.+|. |    .| 
T Consensus       175 ~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~  254 (397)
T 3fsl_A          175 IVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIFSLYGE  254 (397)
T ss_dssp             EEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGGG
T ss_pred             EEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhcCCCEEEEecccccccCcCC
Confidence            566654 222 34665555   6778899999999999998654432                  122333 2    13 


Q ss_pred             --chhh---h--hHHHH----HhhccCCCCCCCCcHHHHHHHHHHHHHH-----hchhhHHHHHHHHHHHHHHHHHHHhC
Q psy10669        176 --EKIL---Y--DYEEK----INNAVFPSLQGGPHNHAIGAIATAMLQA-----QSDEFKSYQAQVKANASHLSDEMIKR  239 (337)
Q Consensus       176 --g~i~---~--~l~~~----i~~~~~p~~~g~~~~~~iaala~a~~e~-----~~~~~~~y~~~v~~na~~l~~~L~~~  239 (337)
                        |+++   .  ++.+.    +....... .++++....++++.++...     .....++.++++.++.++|.+.|.+.
T Consensus       255 riG~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  333 (397)
T 3fsl_A          255 RVGGLSVMCEDAEAAGRVLGQLKATVRRN-YSSPPNFGAQVVAAVLNDEALKASWLKEVEEMRTRILAMRQELVKVLSTE  333 (397)
T ss_dssp             CCEEEEEECSSHHHHHHHHHHHHHHHHTT-TSSCCSHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CeeEEEEecCCHHHHHHHHHHHHHHHHhc-cCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence              5553   1  23322    22211111 2334444444444433321     02334677888999999999999985


Q ss_pred             ----CCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCcccchhhh
Q psy10669        240 ----GYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNTGISLAAE  289 (337)
Q Consensus       240 ----G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~girig~~  289 (337)
                          |+++.... .+..+++.+     +...+...|+++||.+.+.  -||+..
T Consensus       334 ~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~~l~~~gi~v~~g--~Ris~~  379 (397)
T 3fsl_A          334 MPERNFDYLLNQ-RGMFSYTGL-----SAAQVDRLREEFGVYLIAS--GRMCVA  379 (397)
T ss_dssp             CTTSCCTHHHHC-CSSEEECCC-----CHHHHHHHHHTTCEECCTT--CEEEGG
T ss_pred             CCCCCceeecCC-ceEEEecCC-----CHHHHHHHHHhCCEEECCC--CeEEEE
Confidence                67665421 122333333     4567888898999999873  377654

>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}

Probab=98.60  E-value=3.2e-06  Score=81.41  Aligned_cols=253  Identities=13%  Similarity=0.043  Sum_probs=137.1

Q ss_pred             hhhhhcHHHHHHHHHHHhhcccceeeeccCCC-----CCHHHHHHHh--hhhhhccCCCCCCCcCc-CccchHHHHHHHH
Q psy10669         10 TLAQTDPELYSLIKKEKHRQINGIELIASENF-----TSLAVLECLG--SCLQNKYSEGLPGKRYY-GGNQFIDEIEIVA   81 (337)
Q Consensus        10 ~l~~~d~~~~~~~~~e~~rq~~~i~l~asen~-----~~p~V~~a~~--~~l~~~y~~g~~g~r~~-~G~~~~~~lE~~~   81 (337)
                      .++.+.+.++....+-..+ ...|+|-...--     .+|.+++++.  ..+.+    +..- ..| ....-..++.   
T Consensus         6 ~~~~~~~~~~~~~~~~~~~-~~~i~l~~g~p~~~~~~~~~~v~~a~~~~~~~~~----~~~~-~~Yp~~~~g~~~lr---   76 (423)
T 3ez1_A            6 ASRPALDLARQAYEAFKAR-GLNLNMQRGQPADADFDLSNGLLTVLGAEDVRMD----GLDL-RNYPGGVAGLPSAR---   76 (423)
T ss_dssp             CCHHHHHHHHHHHHHHHHH-TCCEESCCCCCCHHHHHTTGGGGGSCCGGGCEET----TEET-TSSCSCTTCCHHHH---
T ss_pred             HHHHHHHHHHHHHHHhhcC-CceEecCCCCCChHhCCCcHHHHHHHhhhHHhhc----chhh-hCCCCCCCChHHHH---
Confidence            3455556666555443333 356777665544     3557777774  22221    1100 112 2222223443   


Q ss_pred             HHHHHhhcCCCCCCCcceeecCCCc-hhHH--HHHHhhCC-------------c--------------------------
Q psy10669         82 QQRSLKAFNLDPEQWGCNVQPYSGS-PANF--AVCEKALP-------------T--------------------------  119 (337)
Q Consensus        82 ~~~~a~lfg~~~~~~~~~v~~~Sgt-~AN~--~v~~aLl~-------------~--------------------------  119 (337)
                       +.++++++++.    .+|.+++|+ .++.  .++.+++.             +                          
T Consensus        77 -~~ia~~~~~~~----~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v  151 (423)
T 3ez1_A           77 -ALFAGYLDVKA----ENVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQTLGFELLTV  151 (423)
T ss_dssp             -HHHHHHTTSCG----GGEEECSSCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHHHHHHHTCEEEEE
T ss_pred             -HHHHHHhCCCh----hhEEEeCCcHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHHHHHHHHcCCEEEec
Confidence             57788999876    368888885 5664  55666532             2                          


Q ss_pred             --------------cc---ccccEEEEcC--cc-cccccChH---HHHHHh-hhcCCeEEEeccccccccc---------
Q psy10669        120 --------------NN---ARFDFLSSGT--TC-YSRCLDYA---RFRQIC-DETDSIMFADMSHISGLIA---------  166 (337)
Q Consensus       120 --------------~~---a~pklII~~~--S~-~~~~~d~~---~l~eia-~~~ga~l~vD~AH~~Gli~---------  166 (337)
                                    .+   .++++|++.+  .+ .+...+.+   +|.++| +++|+++++|++|....+.         
T Consensus       152 ~~~~~g~d~~~l~~~l~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~  231 (423)
T 3ez1_A          152 DMQSDGPDVDAVERLAGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVN  231 (423)
T ss_dssp             EEETTEECHHHHHHHHHSCTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCC
T ss_pred             cCCCCCCCHHHHHHHHhhCCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcc
Confidence                          11   1267887653  22 35677776   677788 8999999999999831110         


Q ss_pred             --------------eeeeeccC-------Cchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHH-H--hchhhHH
Q psy10669        167 --------------GVKGVTKT-------GEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQ-A--QSDEFKS  220 (337)
Q Consensus       167 --------------g~~~T~~~-------Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e-~--~~~~~~~  220 (337)
                                    .+.+|..|       .|+++.  ++.+.+....... ..+++....++.+.++.. .  .....++
T Consensus       232 ~~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~  310 (423)
T 3ez1_A          232 FVVLARDAGYPDRAFVFASTSKITFAGAGLGFVASSEDNIRWLSKYLGAQ-SIGPNKVEQARHVKFLTEYPGGLEGLMRD  310 (423)
T ss_dssp             HHHHHHHHTCTTSEEEEEESTTTSCSSSSCEEEEECHHHHHHHHHHHHHS-CSCCCHHHHHHHHHHHHHSTTHHHHHHHH
T ss_pred             hhhhhhccCCCCeEEEEeCchhhccCCcceEEEEeCHHHHHHHHHHHhhh-ccCCCHHHHHHHHHHHHhccchHHHHHHH
Confidence                          12233322       255544  4655555432212 223455555555555544 1  0122233


Q ss_pred             HHHHHHHHHHHHHHHHH----hCC--CEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceecc
Q psy10669        221 YQAQVKANASHLSDEMI----KRG--YHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNK  280 (337)
Q Consensus       221 y~~~v~~na~~l~~~L~----~~G--~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~  280 (337)
                      .++.+.++.+.+.+.|.    +.|  +++.. ......+++++...  +...+.+.|.+.||.+.+
T Consensus       311 ~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~-p~~g~~~~~~~~~~--~~~~~~~~l~~~gv~v~~  373 (423)
T 3ez1_A          311 HAAIIAPKFRAVDEVLRAELGEGGEYATWTL-PKGGYFISLDTAEP--VADRVVKLAEAAGVSLTP  373 (423)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTTSSEEECC-CSBSSCEEEEESSS--CHHHHHHHHHHTTEECCC
T ss_pred             HHHHHHHHHHHHHHHHHHhcCcCCCceEEeC-CCccEEEEEECCCC--cHHHHHHHHHHCCcEEec
Confidence            44444445555554444    455  66543 23455677888653  577888899999999987

>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}

Probab=98.59  E-value=1.4e-06  Score=85.45  Aligned_cols=158  Identities=11%  Similarity=0.056  Sum_probs=92.1

Q ss_pred             cEEEEcCcccccc---cC----hHHHHHHhhhcCCeEEEecccc-ccccc--------ee---eeec-c--CC----chh
Q psy10669        125 DFLSSGTTCYSRC---LD----YARFRQICDETDSIMFADMSHI-SGLIA--------GV---KGVT-K--TG----EKI  178 (337)
Q Consensus       125 klII~~~S~~~~~---~d----~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g~---~~T~-~--~G----g~i  178 (337)
                      .+||+.+ ++++.   .+    +++|+++|+++|++||+|++|. .|-.+        ++   ..|. |  .+    |++
T Consensus       227 aavi~ep-~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~a~~~~~~~pdi~t~sK~~~~G~~~G~~  305 (453)
T 4ffc_A          227 AAIIIEP-IQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGAWFASEHEGIVPDIVTMAKGIAGGMPLSAV  305 (453)
T ss_dssp             EEEEECS-SBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECGGGGTTSSCEEE
T ss_pred             EEEEEcC-CCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccccchhhhcCCCcchHhhhhhhcCCcCeEEE
Confidence            5666654 55543   23    6679999999999999999996 33322        11   1121 2  11    333


Q ss_pred             hh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-----CCEEecCCCCCe
Q psy10669        179 LY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-----GYHVVTGGTDVH  251 (337)
Q Consensus       179 ~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-----G~~v~~~~t~~h  251 (337)
                      +.  ++.+.+.+....+.+ +.++...++..+++..+.+   +++.+++.++.+++++.|.+.     ++..+.  ....
T Consensus       306 ~~~~~i~~~~~~~~~~~t~-~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~--~~g~  379 (453)
T 4ffc_A          306 TGRAELMDAVYAGGLGGTY-GGNPVTCAAAVAALGVMRE---LDLPARARAIEASVTSRLSALAEEVDIIGEVR--GRGA  379 (453)
T ss_dssp             EEEHHHHTTSCTTSSCCSS-SSCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHHCSSEEEEE--EETT
T ss_pred             EECHHHHhhhcccCcCCCC-CcCHHHHHHHHHHHHHhhh---hhHHHHHHHHHHHHHHHHHHHHhhCCCeEEEE--eece
Confidence            33  455555443222223 4456666666666665532   367788888888888888762     222222  2344


Q ss_pred             EEEEEecC------CCcchHHHHHHHhhcCceeccCc----ccchhhh
Q psy10669        252 LILIDLRK------NKLTGSKVELVLEEIAIACNKNT----GISLAAE  289 (337)
Q Consensus       252 ~v~V~~~~------~~~~~~~~~~~L~~~gI~v~~~~----girig~~  289 (337)
                      ++.+.+..      ......++.+.|.+.||.+.+..    .+||..+
T Consensus       380 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~~~  427 (453)
T 4ffc_A          380 MLAIEIVKPGTLEPDAALTKSIAAEALSQGVLILTCGTFGNVIRLLPP  427 (453)
T ss_dssp             EEEEEEBCTTSCCBCHHHHHHHHHHHHHTTEECCEECTTSCEEEECCC
T ss_pred             EEEEEEecCcccCCCHHHHHHHHHHHHhCCCEEecCCCCCCEEEEECC
Confidence            66677643      11235566677777899987632    4666533

>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*

Probab=98.58  E-value=2.3e-06  Score=82.64  Aligned_cols=157  Identities=13%  Similarity=0.135  Sum_probs=88.5

Q ss_pred             ccEEEEcCccc--ccccC---hHHHHHHhhhcCCeEEEeccccccccc------------------eeeeec-c----CC
Q psy10669        124 FDFLSSGTTCY--SRCLD---YARFRQICDETDSIMFADMSHISGLIA------------------GVKGVT-K----TG  175 (337)
Q Consensus       124 pklII~~~S~~--~~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~------------------g~~~T~-~----~G  175 (337)
                      +++|++..-.+  +...+   +++|.++|+++|+++++|++|.-...+                  .++++. |    .|
T Consensus       196 ~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G  275 (420)
T 4f4e_A          196 TIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAAANLNVFVSSSFSKSFSLYG  275 (420)
T ss_dssp             CEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGG
T ss_pred             CEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHhcCCCEEEEEeCCccCcCcC
Confidence            35666642222  35544   446678899999999999998533221                  122333 2    13


Q ss_pred             ---chhh---h--hHHH----HHhhccCCCCCCCCcHHHHHHHHHHHHHH-----hchhhHHHHHHHHHHHHHHHHHHHh
Q psy10669        176 ---EKIL---Y--DYEE----KINNAVFPSLQGGPHNHAIGAIATAMLQA-----QSDEFKSYQAQVKANASHLSDEMIK  238 (337)
Q Consensus       176 ---g~i~---~--~l~~----~i~~~~~p~~~g~~~~~~iaala~a~~e~-----~~~~~~~y~~~v~~na~~l~~~L~~  238 (337)
                         |+++   .  ++.+    .+....... .++++....++.+.++...     .....++.++++.++.++|.+.|.+
T Consensus       276 ~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~  354 (420)
T 4f4e_A          276 ERVGALSIITDSKDEAARVLSQLKRVIRTN-YSNPPTHGGAIVAAVLASPELRASWVQELGEMRDRIRAMRNGLVERLKA  354 (420)
T ss_dssp             GCEEEEEEECSSHHHHHHHHHHHHHHHHTT-TSSCCSHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcEEEEEEcCCHHHHHHHHHHHHHHHhcc-cCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence               5542   1  2322    232222222 2233444444444333321     0223467788899999999999998


Q ss_pred             C----CCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCcccchhhh
Q psy10669        239 R----GYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNTGISLAAE  289 (337)
Q Consensus       239 ~----G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~girig~~  289 (337)
                      .    |+++... ..+-.+++.     ++...+...|++.||.+.+  +.||+..
T Consensus       355 ~~~~~~~~~~~~-~~g~~~~~~-----~~~~~~~~~l~~~gI~v~~--~~Ris~~  401 (420)
T 4f4e_A          355 AGIERDFSFINA-QRGMFSYSG-----LTSAQVDRLREEFGIYAVS--TGRICVA  401 (420)
T ss_dssp             TTCSSCCTHHHH-SCSSEEECC-----CCHHHHHHHHHHHCEECCT--TSEEEGG
T ss_pred             cCCCCCceeECC-CccEEEEeC-----CCHHHHHHHHHhCCEEecC--CCeEEEe
Confidence            6    6665542 112233332     3567788888889999987  5688654

>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A

Probab=98.57  E-value=2.4e-06  Score=83.67  Aligned_cols=159  Identities=11%  Similarity=0.067  Sum_probs=92.6

Q ss_pred             ccEEEEcCcccccc---cC----hHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeecc--CC----ch
Q psy10669        124 FDFLSSGTTCYSRC---LD----YARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTK--TG----EK  177 (337)
Q Consensus       124 pklII~~~S~~~~~---~d----~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~--~G----g~  177 (337)
                      +++||+.+ +++..   .+    +++|+++|+++|++||+|++|. .|-.+        +    +.+..|  .+    |+
T Consensus       228 ~aavi~ep-~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~t~sK~l~~G~~iG~  306 (451)
T 3oks_A          228 LAAVVIEP-IQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAMFACEHEGIDPDLIVTAKGIAGGLPLSA  306 (451)
T ss_dssp             EEEEEECS-SBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTTSSCEE
T ss_pred             EEEEEEcC-CcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccchhhhhcCCCCCeeeehhhhhCCcceEE
Confidence            35677754 55433   23    6789999999999999999996 33222        1    111112  12    23


Q ss_pred             hhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-----CCEEecCCCCC
Q psy10669        178 ILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-----GYHVVTGGTDV  250 (337)
Q Consensus       178 i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-----G~~v~~~~t~~  250 (337)
                      ++.  ++.+.+.+..... +.+.++...++...++..+.+   +++.+++.++.+++++.|.+.     ++..+.  ...
T Consensus       307 v~~~~~~~~~~~~~~~~~-t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~--~~G  380 (451)
T 3oks_A          307 VTGRAEIMDSPHVSGLGG-TYGGNPIACAAALATIETIES---EGLVARAQQIEKIMKDRLGRLQAEDDRIGDVR--GRG  380 (451)
T ss_dssp             EEEEHHHHTCSCTTSBCC-SSSSCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEE--EET
T ss_pred             EEECHHHHhhhcCCCcCC-CCCCCHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHHHhhCCCeEEEE--Eee
Confidence            333  4555444332222 224566666666666666532   367888888888888888763     222222  233


Q ss_pred             eEEEEEecC------CCcchHHHHHHHhhcCceeccCc----ccchhhh
Q psy10669        251 HLILIDLRK------NKLTGSKVELVLEEIAIACNKNT----GISLAAE  289 (337)
Q Consensus       251 h~v~V~~~~------~~~~~~~~~~~L~~~gI~v~~~~----girig~~  289 (337)
                      .++.+.+..      .......+.+.|.+.||.+.+..    .+||..+
T Consensus       381 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~~~  429 (451)
T 3oks_A          381 AMIAMELVKAGTTEPDADLTKALCAGAHAAGVIVLSCGTYGNVVRFLPP  429 (451)
T ss_dssp             TEEEEEEBSTTSCCBCHHHHHHHHHHHHHTTEECEEECTTSCEEEECCC
T ss_pred             EEEEEEEecCccCCCCHHHHHHHHHHHHhCCcEEecCCCCCCEEEEECC
Confidence            466677643      12235566777778899987632    4666533

>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1

Probab=98.54  E-value=2.5e-06  Score=81.84  Aligned_cols=146  Identities=11%  Similarity=0.099  Sum_probs=89.7

Q ss_pred             ccccC---hHHHHHHhhhcCCeEEEeccccc----c----c--c-c-----e------eeeec-c----CC---chhh--
Q psy10669        135 SRCLD---YARFRQICDETDSIMFADMSHIS----G----L--I-A-----G------VKGVT-K----TG---EKIL--  179 (337)
Q Consensus       135 ~~~~d---~~~l~eia~~~ga~l~vD~AH~~----G----l--i-~-----g------~~~T~-~----~G---g~i~--  179 (337)
                      +...+   +++|.++|+++|+++++|++|..    |    .  + .     .      +.+|. |    .|   |+++  
T Consensus       190 G~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~GlriG~~~~~  269 (412)
T 1yaa_A          190 GLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKNAGMYGERVGCFHLA  269 (412)
T ss_dssp             CCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTTCCEEEEEECTTTSCCGGGCEEEEEEE
T ss_pred             CCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHhcCCCCcceEEEeccCCCCCCcCCcceEEEEE
Confidence            45554   44677889999999999999942    1    0  1 0     1      13333 2    24   5554  


Q ss_pred             h-------h----HHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHh-----chhhHHHHHHHHHHHHHHHHHHHhCC---
Q psy10669        180 Y-------D----YEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQ-----SDEFKSYQAQVKANASHLSDEMIKRG---  240 (337)
Q Consensus       180 ~-------~----l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~-----~~~~~~y~~~v~~na~~l~~~L~~~G---  240 (337)
                      +       +    +.+.+.....+ ..++++.+..+++..++....     ....++.++++.++.++|.+.|.+.|   
T Consensus       270 ~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~  348 (412)
T 1yaa_A          270 LTKQAQNKTIKPAVTSQLAKIIRS-EVSNPPAYGAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLGTPG  348 (412)
T ss_dssp             CCSCTTHHHHHHHHHHHHHHHHHT-TTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSS
T ss_pred             ecCCCCCHHHHHHHHHHHHHHHhh-ccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCC
Confidence            2       2    55555543222 234556666666666665431     12456778888899999999998865   


Q ss_pred             -CEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCcccchhhh
Q psy10669        241 -YHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNTGISLAAE  289 (337)
Q Consensus       241 -~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~girig~~  289 (337)
                       +++....+ +-.+++.     ++...+...|++.||.+.+  .+||+..
T Consensus       349 ~~~~~~~~~-~~~~~~~-----~~~~~~~~~l~~~gi~v~~--~~Ris~~  390 (412)
T 1yaa_A          349 NWDHIVNQC-GMFSFTG-----LTPQMVKRLEETHAVYLVA--SGRASIA  390 (412)
T ss_dssp             CCTHHHHCC-SSEEECC-----CCHHHHHHHHHHHCEECCT--TSEEEGG
T ss_pred             CeeeeccCc-eEEEeeC-----CCHHHHHHHHHhCCEEecc--CcEEEEc
Confidence             77654212 2223332     3456677778788999987  6898764

>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}

Probab=98.53  E-value=1.3e-06  Score=84.53  Aligned_cols=163  Identities=11%  Similarity=0.023  Sum_probs=102.4

Q ss_pred             ccEEEEcCccc--ccccC---hHHHHHHhhh-----cCCeEEEeccccccccc----------------e---e--eeec
Q psy10669        124 FDFLSSGTTCY--SRCLD---YARFRQICDE-----TDSIMFADMSHISGLIA----------------G---V--KGVT  172 (337)
Q Consensus       124 pklII~~~S~~--~~~~d---~~~l~eia~~-----~ga~l~vD~AH~~Gli~----------------g---~--~~T~  172 (337)
                      +++|++..-.+  +...|   +++|.++|++     +|+++++|++|......                .   +  .+|.
T Consensus       190 ~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~  269 (430)
T 2x5f_A          190 KVIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGA  269 (430)
T ss_dssp             EEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEH
T ss_pred             CEEEEEcCCCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEec
Confidence            45655542233  46666   6778889999     99999999999742111                1   1  2222


Q ss_pred             -c----CC---chhhh-----hHHHHHhhccCC---CCCCCCcHHHHHHHHHHHH-HHh-chhhHHHHHHHHHHHHHHHH
Q psy10669        173 -K----TG---EKILY-----DYEEKINNAVFP---SLQGGPHNHAIGAIATAML-QAQ-SDEFKSYQAQVKANASHLSD  234 (337)
Q Consensus       173 -~----~G---g~i~~-----~l~~~i~~~~~p---~~~g~~~~~~iaala~a~~-e~~-~~~~~~y~~~v~~na~~l~~  234 (337)
                       |    .|   |+++.     ++.+.+.....+   ....+++++..+++..++. ... ..+.+..++++.++.++|.+
T Consensus       270 sK~~~~~G~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~  349 (430)
T 2x5f_A          270 TKEFFAWGFRVGFMTFGTSDQTTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKE  349 (430)
T ss_dssp             HHHTTCGGGCCEEEEEBCCCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCCCCCCeEEEEEecCCHHHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHH
Confidence             2    12   55543     455555433211   0233567777777777775 310 12234478888999999999


Q ss_pred             HHH----hCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhh-cCceeccC--cccchhhh
Q psy10669        235 EMI----KRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEE-IAIACNKN--TGISLAAE  289 (337)
Q Consensus       235 ~L~----~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~-~gI~v~~~--~girig~~  289 (337)
                      .|.    +.|+++..+ ..+..+++++.  +.+..++.+.|.+ .||.+.+.  ..+||+..
T Consensus       350 ~L~~~~~~~g~~~~~~-~~g~~~~~~~~--~~~~~~~~~~l~~~~gi~v~~g~~~~iRis~~  408 (430)
T 2x5f_A          350 VVYADQYHSHWQAYDF-NSGYFMAIKVH--DVDPEALRKHLIDKYSIGVIALNATDIRIAFS  408 (430)
T ss_dssp             HHTCGGGTTTEEECCC-CBSSEEEEEES--SSCHHHHHHHHHHHHCEECEECSSSEEEEEGG
T ss_pred             HHHhhCCCCCceeeCC-CceEEEEeCCC--CCCHHHHHHHHHHhCCEEEecCCCCeEEEEEe
Confidence            998    668877642 22345778876  5577788888876 89999863  36898765

>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*

Probab=98.52  E-value=1.7e-06  Score=82.23  Aligned_cols=142  Identities=13%  Similarity=0.074  Sum_probs=85.2

Q ss_pred             ChHHHHHHhhhcCCeEEEeccccccccc--------------e----eeeec-c----CC---chhhh-----hH----H
Q psy10669        139 DYARFRQICDETDSIMFADMSHISGLIA--------------G----VKGVT-K----TG---EKILY-----DY----E  183 (337)
Q Consensus       139 d~~~l~eia~~~ga~l~vD~AH~~Gli~--------------g----~~~T~-~----~G---g~i~~-----~l----~  183 (337)
                      ++++|.++|+++|+++++|++|.....+              +    +.+|. |    .|   |+++.     ++    .
T Consensus       190 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~l~  269 (394)
T 2ay1_A          190 QWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSKNFGIYRERTGCLLALCADAATRELAQ  269 (394)
T ss_dssp             HHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEECTTTTTCGGGCEEEEEEECSSHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhhcCCCEEEEEeccCCCcCcCCccceEEEEeCCHHHHHHHH
Confidence            3456778899999999999999853321              1    23343 3    13   44432     22    2


Q ss_pred             HHHhhccCCCCCCCCcHHHHHHHHHHHHHH-----hchhhHHHHHHHHHHHHHHHHHHHhCC----CEEecCCCCCeEEE
Q psy10669        184 EKINNAVFPSLQGGPHNHAIGAIATAMLQA-----QSDEFKSYQAQVKANASHLSDEMIKRG----YHVVTGGTDVHLIL  254 (337)
Q Consensus       184 ~~i~~~~~p~~~g~~~~~~iaala~a~~e~-----~~~~~~~y~~~v~~na~~l~~~L~~~G----~~v~~~~t~~h~v~  254 (337)
                      +.+...... .++++++...++...++...     .....++.++++.++.++|.+.|.+.|    +++..... ...++
T Consensus       270 ~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~-g~~~~  347 (394)
T 2ay1_A          270 GAMAFLNRQ-TYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQLAGELRDLSGSDRFGFVAEHR-GMFSR  347 (394)
T ss_dssp             HHHHHHHHT-TTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTHHHHCC-SSEEE
T ss_pred             HHHHHHHhh-hcCCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeEEcCCc-eEEEe
Confidence            223222112 23345556666665555432     112456778888888999999998864    66554211 33344


Q ss_pred             EEecCCCcchHHHHHHHhhcCceeccCcccchhhh
Q psy10669        255 IDLRKNKLTGSKVELVLEEIAIACNKNTGISLAAE  289 (337)
Q Consensus       255 V~~~~~~~~~~~~~~~L~~~gI~v~~~~girig~~  289 (337)
                      +.+     +...+...|++.||.+.+  |+||+..
T Consensus       348 ~~~-----~~~~~~~~l~~~gi~v~~--~~Ris~~  375 (394)
T 2ay1_A          348 LGA-----TPEQVKRIKEEFGIYMVG--DSRINIA  375 (394)
T ss_dssp             CCC-----CHHHHHHHHHHHCEECCT--TCEEEGG
T ss_pred             eCC-----CHHHHHHHHHhCCEEecC--CCeEEee
Confidence            443     345677888889999987  7899765

>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...

Probab=98.44  E-value=3.4e-06  Score=80.11  Aligned_cols=143  Identities=11%  Similarity=0.089  Sum_probs=85.9

Q ss_pred             ChHHHHHHhhhcCCeEEEecccccccc-------c-----------eeeeeccC-----C---chhh----h-----hHH
Q psy10669        139 DYARFRQICDETDSIMFADMSHISGLI-------A-----------GVKGVTKT-----G---EKIL----Y-----DYE  183 (337)
Q Consensus       139 d~~~l~eia~~~ga~l~vD~AH~~Gli-------~-----------g~~~T~~~-----G---g~i~----~-----~l~  183 (337)
                      ++++|.++|+++|+++++|++|.....       .           .+.+|.+|     |   |+++    .     ++.
T Consensus       193 ~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~  272 (396)
T 2q7w_A          193 QWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSXNFGLYNERVGACTLVAADSETVDRAF  272 (396)
T ss_dssp             HHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTCGGGCCEEEEEECSSHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhcCCcEEEEEeccccccccccccceEEEEcCCHHHHHHHH
Confidence            345677889999999999999875322       1           12334322     3   5554    2     133


Q ss_pred             HHHhhccCCCCCCCCcHHHHHHHHHHHHHH-----hchhhHHHHHHHHHHHHHHHHHHHhCC----CEEecCCCCCeEEE
Q psy10669        184 EKINNAVFPSLQGGPHNHAIGAIATAMLQA-----QSDEFKSYQAQVKANASHLSDEMIKRG----YHVVTGGTDVHLIL  254 (337)
Q Consensus       184 ~~i~~~~~p~~~g~~~~~~iaala~a~~e~-----~~~~~~~y~~~v~~na~~l~~~L~~~G----~~v~~~~t~~h~v~  254 (337)
                      +.+.....+ ..+++++...++...++...     .....++.++++.++.++|.+.|.+.|    +++..+.+ +..++
T Consensus       273 ~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~-~~~~~  350 (396)
T 2q7w_A          273 SQMKAAIRA-NYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQN-GMFSF  350 (396)
T ss_dssp             HHHHHHHHT-TTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHTTCCSCCTHHHHCC-SSEEE
T ss_pred             HHHHHHHhh-ccCCCCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceecCCC-ceEEE
Confidence            333332222 23455666666666555332     012345667788899999999999977    66543211 22344


Q ss_pred             EEecCCCcchHHHHHHHhhcCceeccCcccchhhhh
Q psy10669        255 IDLRKNKLTGSKVELVLEEIAIACNKNTGISLAAEI  290 (337)
Q Consensus       255 V~~~~~~~~~~~~~~~L~~~gI~v~~~~girig~~~  290 (337)
                      +.+     +...+...|++.||.+.+  |+||+...
T Consensus       351 ~~~-----~~~~~~~~l~~~gv~v~~--~~Ris~~~  379 (396)
T 2q7w_A          351 SGL-----TKEQVLRLREEFGVYAVA--SGRVNVAG  379 (396)
T ss_dssp             CCC-----CHHHHHHHHHHHCEECCT--TCEEEGGG
T ss_pred             ecC-----CHHHHHHHHHhcCeeecC--CceEEEee
Confidence            433     345677888888999987  78997653

>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3

Probab=98.43  E-value=1.7e-06  Score=85.55  Aligned_cols=183  Identities=13%  Similarity=0.045  Sum_probs=105.4

Q ss_pred             HHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc--------------------------------------cc--c
Q psy10669         83 QRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT--------------------------------------NN--A  122 (337)
Q Consensus        83 ~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~--------------------------------------~~--a  122 (337)
                      +++++++|.+.     .+.++||+.|+..++. ++++                                      .+  +
T Consensus       140 ~~la~~~g~~~-----~i~~~sGt~al~~~l~-~~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~~  213 (464)
T 1ibj_A          140 SLLAKLDKADR-----AFCFTSGMAALSAVTH-LIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTTKLDEVAAA  213 (464)
T ss_dssp             HHHHHHHTCSE-----EEEESSHHHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECTTSHHHHHHH
T ss_pred             HHHHHHhCCCe-----EEEECCHHHHHHHHHH-HhCCCCEEEEECCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHHHHH
Confidence            57889999863     5788899888877665 5543                                      00  0


Q ss_pred             ---cccEEEEcC-cc-cccccChHHHHHHhhhcCCeEEEeccccccccc--------eeeeec-c--------CCchhhh
Q psy10669        123 ---RFDFLSSGT-TC-YSRCLDYARFRQICDETDSIMFADMSHISGLIA--------GVKGVT-K--------TGEKILY  180 (337)
Q Consensus       123 ---~pklII~~~-S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~--------g~~~T~-~--------~Gg~i~~  180 (337)
                         ++++|++.. ++ .+...|+++|.++|+++|+++++|++|..|...        .++++. |        .+|+++.
T Consensus       214 i~~~tk~v~l~~p~NptG~v~~l~~i~~la~~~gi~livDea~~~g~~~~~~~~~~div~~S~sK~~~g~~Gl~~G~l~~  293 (464)
T 1ibj_A          214 IGPQTKLVWLESPTNPRQQISDIRKISEMAHAQGALVLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAV  293 (464)
T ss_dssp             CCSSEEEEEECSSCTTTCCCCCHHHHHHHHHTTTCEEEEECTTTCTTTCCGGGTTCSEEEEETTTTTTCSSCCCCEEEEE
T ss_pred             hccCceEEEEeCCCCCCCEeecHHHHHHHHHHcCCEEEEECCCcccccCChhhcCCEEEEECCcccccCCCCCcEEEEEE
Confidence               267888763 33 368889999999999999999999999988652        133333 3        1255553


Q ss_pred             ---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC---------------CCE
Q psy10669        181 ---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR---------------GYH  242 (337)
Q Consensus       181 ---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~---------------G~~  242 (337)
                         ++.+.+..... ...++.++...++...++.     ....+.++..+|++.+++.|.+.               |++
T Consensus       294 ~~~~l~~~l~~~~~-~~g~~~~~~~~~a~~~al~-----~~~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~  367 (464)
T 1ibj_A          294 KGEKLAKEVYFLQN-SEGSGLAPFDCWLCLRGIK-----TMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHH  367 (464)
T ss_dssp             CSHHHHHHHHHHHH-HTTCBCCHHHHHHHHHHHT-----THHHHHHHHHHHHHHHHHHHHTCTTCCEEECTTSTTSTTHH
T ss_pred             ChHHHHHHHHHHHH-hcCCCCCHHHHHHHHhchh-----hHHHHHHHHHHHHHHHHHHHHhCCCceEEECCCCCCCcchH
Confidence               35555553321 0112233333322222322     23344556667777777777764               233


Q ss_pred             EecCCC--CCeEEEEEecCCCcc-hHHHHHHHhhcCceec
Q psy10669        243 VVTGGT--DVHLILIDLRKNKLT-GSKVELVLEEIAIACN  279 (337)
Q Consensus       243 v~~~~t--~~h~v~V~~~~~~~~-~~~~~~~L~~~gI~v~  279 (337)
                      +.....  ...++.++++  +.. ...+.+.|...||.++
T Consensus       368 ~~~~~~~g~g~~~~~~l~--~~~~~~~~~~~L~~~gi~v~  405 (464)
T 1ibj_A          368 LHFSQAKGAGSVFSFITG--SVALSKHLVETTKYFSIAVS  405 (464)
T ss_dssp             HHTTTCSCCCSEEEEECS--CHHHHHHHHHHCSSSEECSC
T ss_pred             HHhccCCCCceEEEEEEC--CHHHHHHHHHhcCcceEeec
Confidence            322111  2457777773  211 2234444554576554

>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}

Probab=98.42  E-value=1.7e-05  Score=76.45  Aligned_cols=153  Identities=12%  Similarity=-0.032  Sum_probs=88.0

Q ss_pred             ccEEEEcCc-c--cccccChH---HHHHHh-hhcCCeEEEeccccccccc----------------------eeeeeccC
Q psy10669        124 FDFLSSGTT-C--YSRCLDYA---RFRQIC-DETDSIMFADMSHISGLIA----------------------GVKGVTKT  174 (337)
Q Consensus       124 pklII~~~S-~--~~~~~d~~---~l~eia-~~~ga~l~vD~AH~~Gli~----------------------g~~~T~~~  174 (337)
                      +++|++.++ .  .+...|.+   +|.++| +++|+++++|++|....+.                      .+.+|..|
T Consensus       181 ~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK  260 (427)
T 3ppl_A          181 VKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSK  260 (427)
T ss_dssp             EEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTT
T ss_pred             CeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEechhh
Confidence            688887642 2  35777777   666788 9999999999999752211                      12333322


Q ss_pred             -------Cchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHH--HhchhhHHHHHHHHHHHHHHHHHHHh----C
Q psy10669        175 -------GEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQ--AQSDEFKSYQAQVKANASHLSDEMIK----R  239 (337)
Q Consensus       175 -------Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e--~~~~~~~~y~~~v~~na~~l~~~L~~----~  239 (337)
                             .|+++.  ++.+.+......... +++....++++.++..  ......++.++.+.++.+.+.+.|.+    .
T Consensus       261 ~~~~G~r~G~~~~~~~l~~~~~~~~~~~~~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~  339 (427)
T 3ppl_A          261 ITLAGAGVSFFLTSAENRKWYTGHAGIRGI-GPNKVNQLAHARYFGDAEGVRAVMRKHAASLAPKFNKVLEILDSRLAEY  339 (427)
T ss_dssp             TSCTTSSCEEEECCHHHHHHHHHHHHHHCS-CCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred             ccCcCccEEEEEcCHHHHHHHHHHhhcccC-CCCHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence                   255554  455555433211112 3344444444444332  11122344455555566666666554    2


Q ss_pred             -CCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceecc
Q psy10669        240 -GYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNK  280 (337)
Q Consensus       240 -G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~  280 (337)
                       ++.+.. ......+++++...  +..++.+.|.+.||.+.+
T Consensus       340 ~~~~~~~-p~~g~~~~~~~~~~--~~~~~~~~l~~~gv~v~~  378 (427)
T 3ppl_A          340 GVAQWTV-PAGGYFISLDVVPG--TASRVAELAKEAGIALTG  378 (427)
T ss_dssp             TCCEECC-CSBSSCEEEECSTT--CHHHHHHHHHHTTEECCC
T ss_pred             CceEEeC-CCccEEEEEECCcc--hHHHHHHHHHHCCCEEec
Confidence             566543 23466677888653  577888889989999986

>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}

Probab=98.41  E-value=7.1e-06  Score=82.39  Aligned_cols=163  Identities=13%  Similarity=0.010  Sum_probs=90.6

Q ss_pred             ccEEEEc-Ccc-cccccChH---HHHHHhh-hcCCeEEEeccccccccc------------eeeeec-c----CC---ch
Q psy10669        124 FDFLSSG-TTC-YSRCLDYA---RFRQICD-ETDSIMFADMSHISGLIA------------GVKGVT-K----TG---EK  177 (337)
Q Consensus       124 pklII~~-~S~-~~~~~d~~---~l~eia~-~~ga~l~vD~AH~~Gli~------------g~~~T~-~----~G---g~  177 (337)
                      +++|++. +++ .+...+.+   +|.++|+ ++|+++++|++|.-....            .+++|. |    .|   |+
T Consensus       245 ~k~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~  324 (533)
T 3f6t_A          245 IKALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFKSIYSVVPYNTMLVYSYSKLFGCTGWRLGV  324 (533)
T ss_dssp             EEEEEEESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCCCHHHHSGGGEEEEEESHHHHTCGGGCEEE
T ss_pred             CeEEEEeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCccCHhhcCCCCEEEEecCcccCCCcccceEE
Confidence            5777764 433 34666666   5556777 689999999999732211            123333 2    24   66


Q ss_pred             hhh--h-HHHHHh-----------------------------------hccCCCCCCCCcHHHHHHHHH-HHHHHh----
Q psy10669        178 ILY--D-YEEKIN-----------------------------------NAVFPSLQGGPHNHAIGAIAT-AMLQAQ----  214 (337)
Q Consensus       178 i~~--~-l~~~i~-----------------------------------~~~~p~~~g~~~~~~iaala~-a~~e~~----  214 (337)
                      ++.  + +.+++-                                   ..+.....++++.+..++++. ++..+.    
T Consensus       325 l~~~~~~~~~~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a~a~~a~~~L~~~~g  404 (533)
T 3f6t_A          325 IALNEKNVFDDNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIMEALFSMTHLLTSTN  404 (533)
T ss_dssp             EEEESSCHHHHHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHHHHHHHHHHHTTCBG
T ss_pred             EEECcHHHHHHHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHhhhcc
Confidence            654  2 222111                                   112333455666666666432 222221    


Q ss_pred             ----chhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCC-----C----------cch-HHHHHHHhhc
Q psy10669        215 ----SDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKN-----K----------LTG-SKVELVLEEI  274 (337)
Q Consensus       215 ----~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~-----~----------~~~-~~~~~~L~~~  274 (337)
                          ....++.++.+.++.++|.+.|. .|+++... .....+++++...     +          .+. ..+.+.|++.
T Consensus       405 ~~~~~~~~~~~~~~~~~r~~~l~~~L~-~~~~~~~~-~~g~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~ll~~~  482 (533)
T 3f6t_A          405 GGSDDPYIDIARKLVSERYDQLHDAMQ-APKDETDT-NTHYYSLIDIYRLAEKIYGKEFRDYLTNNFEQVDFLLKLAEKN  482 (533)
T ss_dssp             GGTBCHHHHHHHHHHHHHHHHHHHHHT-CCCCCSTT-BCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHT
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHHhcC-CCccccCC-CceEEEEEehHhhhhhccchHHHHHhhccCCHHHHHHHHHHhC
Confidence                23345667788888889999887 67665432 2223456666530     1          123 4445666788


Q ss_pred             CceeccCc-------ccchhh
Q psy10669        275 AIACNKNT-------GISLAA  288 (337)
Q Consensus       275 gI~v~~~~-------girig~  288 (337)
                      ||.+.+-.       .|||+.
T Consensus       483 GV~v~pg~~f~~~~~~iRls~  503 (533)
T 3f6t_A          483 GVVLVDGVGFGAKPGELRVSQ  503 (533)
T ss_dssp             TSSSCTTEEECSSTTEEEEES
T ss_pred             CEEEeCCcccCCCCCEEEEEE
Confidence            99998633       577764

>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*

Probab=98.40  E-value=2.7e-06  Score=83.88  Aligned_cols=118  Identities=15%  Similarity=0.178  Sum_probs=78.2

Q ss_pred             ccEEEEcCcccc--cccChHHHHHHhhhcCCeEEEeccccccc--c----------c----eeeeecc------CCchhh
Q psy10669        124 FDFLSSGTTCYS--RCLDYARFRQICDETDSIMFADMSHISGL--I----------A----GVKGVTK------TGEKIL  179 (337)
Q Consensus       124 pklII~~~S~~~--~~~d~~~l~eia~~~ga~l~vD~AH~~Gl--i----------~----g~~~T~~------~Gg~i~  179 (337)
                      +-+||++++.|+  ..-|+++|.+||+++|++|+||+||++-+  +          .    .++++||      .|++++
T Consensus       199 ~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~VD~A~G~~~~~~~~l~~~a~~~~~AD~~v~S~HK~l~a~~~~~~l~  278 (450)
T 3bc8_A          199 ILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIA  278 (450)
T ss_dssp             EEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHHHSCCCEEEEEHHHHHSCCSSCEEEE
T ss_pred             EEEEEEECCcCCCceecCHHHHHHHHHHCCCeEEEECCCchhhhhhHhHHHHHhcccCCCEEEECCccCCCchhccEEEE
Confidence            346677788887  78999999999999999999999999621  1          1    2456664      345554


Q ss_pred             h---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh----CCCEEec
Q psy10669        180 Y---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK----RGYHVVT  245 (337)
Q Consensus       180 ~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~----~G~~v~~  245 (337)
                      .   ++.+.+.. .+|+.+++.  |. ..+...+...-...|.+..++.++++++|++.|.+    .|+.+.+
T Consensus       279 ~rd~~~~~~~~~-~~~g~~s~S--ps-L~l~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~g~~~l~  347 (450)
T 3bc8_A          279 GFNEPFIQDISK-MYPGRASAS--PS-LDVLITLLSLGCSGYRKLLKERKEMFVYLSTQLKKLAEAHNERLLQ  347 (450)
T ss_dssp             ESCHHHHHHHHH-HSCSCBCSH--HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCC
T ss_pred             ecCHHHHHHHHH-HhhcCCccc--HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhcCceecC
Confidence            3   34445544 366655432  22 33334444433345566666679999999999976    3888875

>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A

Probab=98.33  E-value=4.7e-06  Score=81.57  Aligned_cols=158  Identities=11%  Similarity=0.054  Sum_probs=97.1

Q ss_pred             ccEEEEcCcccc---cccC----hHHHHHHhhhcCCeEEEecccc-ccccc--------ee---eeec----cCCchhhh
Q psy10669        124 FDFLSSGTTCYS---RCLD----YARFRQICDETDSIMFADMSHI-SGLIA--------GV---KGVT----KTGEKILY  180 (337)
Q Consensus       124 pklII~~~S~~~---~~~d----~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g~---~~T~----~~Gg~i~~  180 (337)
                      +++|++.+ .++   ...+    +++|+++|+++|++|++|++|+ .|-.+        ++   ..|.    +-|+++..
T Consensus       232 ~~~vi~ep-~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~~di~t~sK~l~iG~~~~~  310 (449)
T 2cjg_A          232 IACFVAEP-IQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQLDVAPDIVAFGKKTQVCGVMAG  310 (449)
T ss_dssp             EEEEEECS-EETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECGGGSSEEEEEC
T ss_pred             eEEEEEeC-cCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCcceeecccCCCceEEEecCcccEEEEEEC
Confidence            36777764 433   3344    8889999999999999999998 43322        11   1111    23554443


Q ss_pred             -hHHHHHhhc----cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-----C-CEEecCCCC
Q psy10669        181 -DYEEKINNA----VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-----G-YHVVTGGTD  249 (337)
Q Consensus       181 -~l~~~i~~~----~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-----G-~~v~~~~t~  249 (337)
                       ++.+.+.+.    ..-+.+.+.++...++..+++..+.+   +++.+++.++.++|.+.|.+.     + +..+.  ..
T Consensus       311 ~~~~~~l~~~~~~~~~~~~t~~~n~~~~~aa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~--~~  385 (449)
T 2cjg_A          311 RRVDEVADNVFAVPSRLNSTWGGNLTDMVRARRILEVIEA---EGLFERAVQHGKYLRARLDELAADFPAVVLDPR--GR  385 (449)
T ss_dssp             GGGGGSTTCTTTSTTSSCCSSSSCHHHHHHHHHHHHHHHH---HTHHHHHHHHHHHHHHHHHHHHHHSTTTSEEEE--EE
T ss_pred             HHHhhhhhhcccCCcccccCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEe--ec
Confidence             454432211    11112234567777777777776643   356788899999999999863     2 43332  34


Q ss_pred             CeEEEEEecCCCcchHHHHHHHhhcCceeccCc--ccchhh
Q psy10669        250 VHLILIDLRKNKLTGSKVELVLEEIAIACNKNT--GISLAA  288 (337)
Q Consensus       250 ~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~--girig~  288 (337)
                      ..++.+++.... +..++.+.|.+.||.+.+..  .|||..
T Consensus       386 g~~~~~~~~~~~-~~~~~~~~l~~~Gv~v~~~g~~~iRi~~  425 (449)
T 2cjg_A          386 GLMCAFSLPTTA-DRDELIRQLWQRAVIVLPAGADTVRFRP  425 (449)
T ss_dssp             TTEEEEECSSHH-HHHHHHHHHHHTTEECEEETTTEEEECC
T ss_pred             cEEEEEEECChH-HHHHHHHHHHHCCeEEecCCCCEEEEEC
Confidence            557777776422 35567777777899998642  577753

>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}

Probab=98.32  E-value=2e-05  Score=76.01  Aligned_cols=257  Identities=16%  Similarity=0.045  Sum_probs=135.6

Q ss_pred             hhhhhhhcHHHHHHHHHHHhhcccceeeeccCCC-----CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHH
Q psy10669          8 HGTLAQTDPELYSLIKKEKHRQINGIELIASENF-----TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQ   82 (337)
Q Consensus         8 ~~~l~~~d~~~~~~~~~e~~rq~~~i~l~asen~-----~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~   82 (337)
                      .+.|...-..++....+-.. +...|+|...++-     .+|.+++++...+....  +.... .|.-..-..++    +
T Consensus        11 ~~~l~~~~~~~~~~~~~l~~-~~~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~--~~~~~-~Y~~~~G~~~l----r   82 (422)
T 3d6k_A           11 AARLAQVREEVTAKYAELKA-KNLSLDLTRGKPSAEQLDLSNDLLSLPGGDFRTKD--GVDCR-NYGGLLGIADI----R   82 (422)
T ss_dssp             -------CHHHHHHHHHHHH-TTCCEECCCCSCCHHHHHTTGGGGGCSTTCCBCTT--CCBTT-SSCCSSCCHHH----H
T ss_pred             HHHHHhhHHHHHHHHHHHhc-cCCeEeCCCCCCChhhCCCcHHHHHHHHHHHhhcc--chhhh-CCCCCCCCHHH----H
Confidence            34455556666666554333 4457888888773     24466666543211000  00001 12211112333    3


Q ss_pred             HHHHhhcCCCCCCCcceeecCCCc-hhH--HHHHHhhC-C--------------c-------------------------
Q psy10669         83 QRSLKAFNLDPEQWGCNVQPYSGS-PAN--FAVCEKAL-P--------------T-------------------------  119 (337)
Q Consensus        83 ~~~a~lfg~~~~~~~~~v~~~Sgt-~AN--~~v~~aLl-~--------------~-------------------------  119 (337)
                      +.++++++.+.    .+|.+++|+ +++  ..++.++. +              .                         
T Consensus        83 ~~ia~~~~~~~----~~i~~t~G~~~al~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~~~~g~~~~~v  158 (422)
T 3d6k_A           83 ELWAEALGLPA----DLVVAQDGSSLNIMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHFTITEHFGFEMINV  158 (422)
T ss_dssp             HHHHHHHTCCG----GGEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHHTCEEEEE
T ss_pred             HHHHHHhCCCh----hHEEEecchHHHHHHHHHHHHhcCcccccccccccCCCCEEEEeCCccHHHHHHHHHcCCEEEec
Confidence            57788889875    368888885 454  23334432 1              1                         


Q ss_pred             ----------cc----c--cccEEEEcC--cc-cccccChH---HHHHHhh-hcCCeEEEeccccc-cccc---------
Q psy10669        120 ----------NN----A--RFDFLSSGT--TC-YSRCLDYA---RFRQICD-ETDSIMFADMSHIS-GLIA---------  166 (337)
Q Consensus       120 ----------~~----a--~pklII~~~--S~-~~~~~d~~---~l~eia~-~~ga~l~vD~AH~~-Gli~---------  166 (337)
                                .+    .  ++|+|++..  .+ -+...+.+   +|.++|+ ++|+++++|++|.. ++..         
T Consensus       159 ~~~~~g~d~~~l~~~l~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~  238 (422)
T 3d6k_A          159 PMTDEGPDMGVVRELVKDPQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVI  238 (422)
T ss_dssp             EEETTEECHHHHHHHHTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHH
T ss_pred             CCCCCCCCHHHHHHHHhcCCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCCCCCcChh
Confidence                      01    1  257777432  22 35677777   5667777 89999999999973 2211         


Q ss_pred             ------------eeeeeccC-------Cchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHH--hchhhHHHHH
Q psy10669        167 ------------GVKGVTKT-------GEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQA--QSDEFKSYQA  223 (337)
Q Consensus       167 ------------g~~~T~~~-------Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~--~~~~~~~y~~  223 (337)
                                  .+.+|..|       .|+++.  ++.+.+.....+. ..+++.+..++...++...  .....++.++
T Consensus       239 ~~~~~~~~~~~~i~~~S~SK~~~~GlriG~~~~~~~l~~~l~~~~~~~-~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~  317 (422)
T 3d6k_A          239 EFAQAAGNPNRFWFMSSTSKITHAGSGVSFFASSKENIEWYASHANVR-GIGPNKLNQLAHAQFFGDVAGLKAHMLKHAA  317 (422)
T ss_dssp             HHHHHTTCTTCEEEEEESTTTSCTTSSCEEEECCHHHHHHHHHHHHHH-CSCCCHHHHHHHHHHHCSHHHHHHHHHHHHH
T ss_pred             hHhhccCCCCcEEEEcChhhhcCcccceEEEEeCHHHHHHHHHHHHhh-cCCCCHHHHHHHHHHHhCcchHHHHHHHHHH
Confidence                        11233322       255554  4656555432222 2245556665555554321  0112344455


Q ss_pred             HHHHHHHHHHHHHHh----CC-CEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceecc
Q psy10669        224 QVKANASHLSDEMIK----RG-YHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNK  280 (337)
Q Consensus       224 ~v~~na~~l~~~L~~----~G-~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~  280 (337)
                      .+.++.+++.+.|.+    .| +.+.. ...+..+++++...  +..++.+.|.+.||.+.+
T Consensus       318 ~~~~~~~~l~~~L~~~l~~~~~~~~~~-p~~g~~~~~~~~~~--~~~~~~~~l~~~gV~v~~  376 (422)
T 3d6k_A          318 SLAPKFERVLEILDSRLSEYGVAKWTS-PTGGYFISVDVVPG--TASRVVELAKEAGIALTG  376 (422)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEECC-CSBSSCEEEEESTT--CHHHHHHHHHHTTEECCC
T ss_pred             HHHHHHHHHHHHHHHhcCcCCceEEeC-CCcceEEEEECCCC--CHHHHHHHHHHCCeEEEc
Confidence            666677777777765    33 56543 23455678888643  567788889899999986

>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*

Probab=98.28  E-value=3.7e-05  Score=73.47  Aligned_cols=142  Identities=11%  Similarity=0.070  Sum_probs=86.5

Q ss_pred             ChHHHHHHhhhcCCeEEEeccccc-ccc-------c-----------eeeeeccC-----C---chhh----h-h----H
Q psy10669        139 DYARFRQICDETDSIMFADMSHIS-GLI-------A-----------GVKGVTKT-----G---EKIL----Y-D----Y  182 (337)
Q Consensus       139 d~~~l~eia~~~ga~l~vD~AH~~-Gli-------~-----------g~~~T~~~-----G---g~i~----~-~----l  182 (337)
                      ++++|.++|+++|+++++|++|.. +.-       .           .+.+|..|     |   |+++    . +    +
T Consensus       204 ~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~  283 (412)
T 1ajs_A          204 QWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRV  283 (412)
T ss_dssp             HHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHH
T ss_pred             HHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHHHhccCCcEEEEEecccccCCCCcceEEEEEecCCHHHHHHH
Confidence            345677899999999999999752 211       1           12333322     3   4443    2 2    3


Q ss_pred             HHHHhhccCCCCCCCCcHHHHHHHHHHHHHHh-----chhhHHHHHHHHHHHHHHHHHHHhCC----CEEecCCCCCeEE
Q psy10669        183 EEKINNAVFPSLQGGPHNHAIGAIATAMLQAQ-----SDEFKSYQAQVKANASHLSDEMIKRG----YHVVTGGTDVHLI  253 (337)
Q Consensus       183 ~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~-----~~~~~~y~~~v~~na~~l~~~L~~~G----~~v~~~~t~~h~v  253 (337)
                      .+.+..... ...++++++..+++..++....     ....++.++++.++.++|.+.|.+.|    +++... ..+..+
T Consensus       284 ~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~-~~~~~~  361 (412)
T 1ajs_A          284 LSQMQKIVR-VTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTPGTWNHITD-QIGMFS  361 (412)
T ss_dssp             HHHHHHHHH-TTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHH-CCSSEE
T ss_pred             HHHHHHHHh-cccCCCChHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeEEcC-CCceEE
Confidence            333443211 2234456666776666665431     12446778889999999999999976    665542 122233


Q ss_pred             EEEecCCCcchHHHHHHHhhcCceeccCcccchhhh
Q psy10669        254 LIDLRKNKLTGSKVELVLEEIAIACNKNTGISLAAE  289 (337)
Q Consensus       254 ~V~~~~~~~~~~~~~~~L~~~gI~v~~~~girig~~  289 (337)
                      ++.+     +...+...|++.||.+.+  ++||+..
T Consensus       362 ~~~~-----~~~~~~~~l~~~gv~v~~--~~Ris~~  390 (412)
T 1ajs_A          362 FTGL-----NPKQVEYLINQKHIYLLP--SGRINMC  390 (412)
T ss_dssp             ECCC-----CHHHHHHHHHTTCEECCT--TSEEEGG
T ss_pred             EeCC-----CHHHHHHHHHhCCEEecC--CcEEEee
Confidence            3332     356677778889999987  7898755

>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}

Probab=98.24  E-value=0.00016  Score=70.54  Aligned_cols=147  Identities=16%  Similarity=0.075  Sum_probs=83.5

Q ss_pred             ccccChHH---HHHHhhhcCCeEEEeccccccccc-------------------eeeeec-c----CC---chh---h--
Q psy10669        135 SRCLDYAR---FRQICDETDSIMFADMSHISGLIA-------------------GVKGVT-K----TG---EKI---L--  179 (337)
Q Consensus       135 ~~~~d~~~---l~eia~~~ga~l~vD~AH~~Gli~-------------------g~~~T~-~----~G---g~i---~--  179 (337)
                      ++..+.++   |.++|+++|+++++|++|.....+                   .++.|. |    .|   |++   .  
T Consensus       216 G~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~  295 (448)
T 3meb_A          216 GIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAVRMFVDAGVEVLVAQSFSKNFGLYGERIGCLHVVHAG  295 (448)
T ss_dssp             CCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCCEEEEEECCC
T ss_pred             CcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCchhHHHHhhcCCcEEEEecccccCCCccccceeeeeeecc
Confidence            46666555   778899999999999998732221                   113333 2    23   553   4  


Q ss_pred             ------h------hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHh-----chhhHHHHHHHHHHHHHHHHHHHhCCCE
Q psy10669        180 ------Y------DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQ-----SDEFKSYQAQVKANASHLSDEMIKRGYH  242 (337)
Q Consensus       180 ------~------~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~-----~~~~~~y~~~v~~na~~l~~~L~~~G~~  242 (337)
                            .      ++.+.+.....+ ..++++.+..++++.++..-.     ..+.++.++++.++.++|.+.|.+.|+.
T Consensus       296 ~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~  374 (448)
T 3meb_A          296 VEGSVEKNKALSAAMVSGMTLQIRK-TWSMSAIHGAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKRKTP  374 (448)
T ss_dssp             CSSSHHHHHHHHHHHHHHHHHHHHT-TTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             ccccccCCHHHHHHHHHHHHHHHhc-ccCCccHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence                  3      233344433232 233455555555555443210     1234677888899999999999987532


Q ss_pred             ---------EecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCcccchhhh
Q psy10669        243 ---------VVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNTGISLAAE  289 (337)
Q Consensus       243 ---------v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~girig~~  289 (337)
                               .... ...-..++.     ++...+...|+++||.+.+-.| ||+..
T Consensus       375 ~~~~~~~~~~~~~-~~g~~~~~~-----~~~~~~~~ll~~~gV~v~~G~g-Ris~a  423 (448)
T 3meb_A          375 GPGSKGTWDHILT-AIGMFTFTG-----LTPEHVDYLKEKWSIYLVKAGG-RMSMC  423 (448)
T ss_dssp             CSTTTCCCTHHHH-CCSSEEECC-----CCHHHHHHHHHHHCEEECSGGG-EEEGG
T ss_pred             CcCcccccceeCC-CceEEEecC-----CCHHHHHHHHHhCCEEEeCCCc-EEEEe
Confidence                     2221 111222322     2456666777889999987333 77653

>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*

Probab=98.11  E-value=1.8e-05  Score=76.42  Aligned_cols=158  Identities=13%  Similarity=0.117  Sum_probs=95.6

Q ss_pred             cEEEEcCccc--ccccC----hHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeecc---CC---chhh
Q psy10669        125 DFLSSGTTCY--SRCLD----YARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTK---TG---EKIL  179 (337)
Q Consensus       125 klII~~~S~~--~~~~d----~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~---~G---g~i~  179 (337)
                      ++|++.+...  +...+    +++|.++|+++|++|++|++|+ .|-.+        +    +.+..|   .|   |+++
T Consensus       205 ~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~~~~~~~~~~~~di~s~sK~~~~G~~ig~~~  284 (433)
T 1zod_A          205 AAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDGVTPDILTLSKTLGAGLPLAAIV  284 (433)
T ss_dssp             EEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECHHHHTTSSCEEEE
T ss_pred             EEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCchHhHHhhcCCCCCEEEecccccCCCCeeEEE
Confidence            5777765322  33344    7889999999999999999998 54332        1    111112   12   4554


Q ss_pred             h--hHHHHHhhcc-CCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC----C-CEEecCCCCCe
Q psy10669        180 Y--DYEEKINNAV-FPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR----G-YHVVTGGTDVH  251 (337)
Q Consensus       180 ~--~l~~~i~~~~-~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~----G-~~v~~~~t~~h  251 (337)
                      .  ++.+.+.+.- +-+..-+.++...++..+++..+.+   +++.+++.++.++|.+.|.+.    + +..+.  ....
T Consensus       285 ~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~aal~~~~~---~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~--~~g~  359 (433)
T 1zod_A          285 TSAAIEERAHELGYLFYTTHVSDPLPAAVGLRVLDVVQR---DGLVARANVMGDRLRRGLLDLMERFDCIGDVR--GRGL  359 (433)
T ss_dssp             ECHHHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEE--EETT
T ss_pred             EhHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEE--EEEE
Confidence            4  5666665521 1111223466777777777766543   246788888899999888763    2 22222  2345


Q ss_pred             EEEEEecCC-------CcchHHHHHHHhhcCceeccCc------ccchh
Q psy10669        252 LILIDLRKN-------KLTGSKVELVLEEIAIACNKNT------GISLA  287 (337)
Q Consensus       252 ~v~V~~~~~-------~~~~~~~~~~L~~~gI~v~~~~------girig  287 (337)
                      ++++++...       .....++.+.|.+.||.+.+..      .|||.
T Consensus       360 ~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~lRi~  408 (433)
T 1zod_A          360 LLGVEIVKDRRTKEPADGLGAKITRECMNLGLSMNIVQLPGMGGVFRIA  408 (433)
T ss_dssp             EEEEEEEEETTTTEECTTHHHHHHHHHHHTTEECCEECCTTSCCEEEEC
T ss_pred             EEEEEEecCccccCCChHHHHHHHHHHHHCCCeEeccCCCCCCCEEEEE
Confidence            667776531       1235667777778899987632      46664

>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*

Probab=97.36  E-value=4.3e-07  Score=90.09  Aligned_cols=217  Identities=11%  Similarity=0.028  Sum_probs=121.3

Q ss_pred             CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhc-CCCCCCCcceeecCCCchhHHHHHHhhC---C
Q psy10669         43 SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAF-NLDPEQWGCNVQPYSGSPANFAVCEKAL---P  118 (337)
Q Consensus        43 ~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lf-g~~~~~~~~~v~~~Sgt~AN~~v~~aLl---~  118 (337)
                      +|.|.+|+...+..    |. ..++  .+....+++    +++++++ +.+.     .+.++||+.||.+++....   +
T Consensus       118 ~p~V~~Av~~q~~~----~~-~~~~--~~~~~~~La----e~L~~~~p~~~~-----v~~~nSGseA~~~Aik~ar~~tg  181 (465)
T 2yky_A          118 HPVIRAAVERALAV----GL-NLST--QTENEALFA----EAVCDRFPSIDL-----VRFTNSGTEANLMALATATAITG  181 (465)
Confidence            89999998765433    11 1111  122223344    5778888 4443     3556788999988766531   1


Q ss_pred             -----------------------------c------------c--cc----cccEEEEcCcccc---cccC----hHHHH
Q psy10669        119 -----------------------------T------------N--NA----RFDFLSSGTTCYS---RCLD----YARFR  144 (337)
Q Consensus       119 -----------------------------~------------~--~a----~pklII~~~S~~~---~~~d----~~~l~  144 (337)
                                                   .            +  +.    ++++||+.+ +++   ...+    +++|+
T Consensus       182 r~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~~~~d~~~l~~~l~~~~~~~aavi~ep-v~~~~G~~~~~~~~l~~l~  260 (465)
T 2yky_A          182 RKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLGVYNDVEGTADLLKRHGHDCAAILVEP-MLGAGGCVPAERAFLDLLR  260 (465)
Confidence                                         0            0  01    146777753 433   2333    78899


Q ss_pred             HHhhhcCCeEEEeccccccccc--------ee---eeec-c--CC----chhhh--hHHHHHhh---c-cCCCCCCCCcH
Q psy10669        145 QICDETDSIMFADMSHISGLIA--------GV---KGVT-K--TG----EKILY--DYEEKINN---A-VFPSLQGGPHN  200 (337)
Q Consensus       145 eia~~~ga~l~vD~AH~~Gli~--------g~---~~T~-~--~G----g~i~~--~l~~~i~~---~-~~p~~~g~~~~  200 (337)
                      ++|+++|++||+|++|+ +-.+        ++   ..|. |  -|    |++++  ++.+.+.+   . ++-+.+-+.++
T Consensus       261 ~l~~~~g~llI~DEv~~-~r~g~~~a~~~~gv~pDi~t~sK~lg~G~piG~v~~~~~i~~~l~~~~~g~~~~~~T~~~np  339 (465)
T 2yky_A          261 AEASRCGALLIFDEVMT-SRLSGGGAQEMLGISADLTTLGKYIGGGMSFGAFGGRRDLMERFDPARDGAFAHAGTFNNNI  339 (465)
Confidence            99999999999999999 5332        11   1122 2  12    33333  46565554   1 11111223455


Q ss_pred             HHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCEEec-CCCCCeEEEEEecCCCc------------chH
Q psy10669        201 HAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYHVVT-GGTDVHLILIDLRKNKL------------TGS  265 (337)
Q Consensus       201 ~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~v~~-~~t~~h~v~V~~~~~~~------------~~~  265 (337)
                      ...++..+++..+.+   +.+.+++.++.++|+++|.+.  .+.+.. -.....++.+.+.....            ...
T Consensus       340 la~aAa~aaL~~l~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~d~~~~~  416 (465)
T 2yky_A          340 LTMSAGHAALTQIYT---RQAASDLSASGDRFRANLNRIAVENQAPLQFTGLGSLGTIHFSRAPIRSAGDVRAADQQLKE  416 (465)
Confidence            566666566666533   357889999999999998874  233221 11234566665543110            133


Q ss_pred             HHHHHHhhcCceecc
Q psy10669        266 KVELVLEEIAIACNK  280 (337)
Q Consensus       266 ~~~~~L~~~gI~v~~  280 (337)
                      .+...|.+.||.+.+
T Consensus       417 ~~~~~ll~~GV~v~p  431 (465)
T 2yky_A          417 LFFFHMLRKGIYLAP  431 (465)
Confidence            455556667998875

>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*

Probab=98.08  E-value=2.4e-05  Score=77.30  Aligned_cols=154  Identities=11%  Similarity=0.064  Sum_probs=93.4

Q ss_pred             cEEEEcCcccc---cccC----hHHHHHHhhhcCCeEEEecccc-ccccc--------ee-----eeec-cC---Cchhh
Q psy10669        125 DFLSSGTTCYS---RCLD----YARFRQICDETDSIMFADMSHI-SGLIA--------GV-----KGVT-KT---GEKIL  179 (337)
Q Consensus       125 klII~~~S~~~---~~~d----~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g~-----~~T~-~~---Gg~i~  179 (337)
                      ++||+.+ +++   ...+    +++|+++|+++|++|++|++|+ .|-.+        ++     ..|. |.   ||+++
T Consensus       260 ~~vive~-v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~gv~~~~Di~t~sK~~l~GG~~~  338 (472)
T 1ohv_A          260 AGIIVEP-IQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQTGGGSTGKFWAHEHWGLDDPADVMTFSKKMMTGGFFH  338 (472)
T ss_dssp             EEEEECS-SBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGCCSSCCSEEEECGGGSSEEEEE
T ss_pred             EEEEEcC-CcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEeCcccCCCCCCCchhccccCCCCCCCEEEEccccccCCccC
Confidence            5777763 443   3445    7889999999999999999997 33322        21     1122 32   46654


Q ss_pred             hhHHHHHhhccCCCC-CC--CCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CC----EEecCCCCC
Q psy10669        180 YDYEEKINNAVFPSL-QG--GPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GY----HVVTGGTDV  250 (337)
Q Consensus       180 ~~l~~~i~~~~~p~~-~g--~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~----~v~~~~t~~  250 (337)
                      .   +.+.. ..+.. .+  +.++..+++..+++..+.+   +++.+++.++.++|.+.|.+.  ++    .-+.  ...
T Consensus       339 ~---~~~~~-~~~~~~~~T~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~v~~~~--~~g  409 (472)
T 1ohv_A          339 K---EEFRP-NAPYRIFNTWLGDPSKNLLLAEVINIIKR---EDLLSNAAHAGKVLLTGLLDLQARYPQFISRVR--GRG  409 (472)
T ss_dssp             C---GGGSC-SSSSSSCCSSSSCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHHCTTTCEEEE--EET
T ss_pred             c---hhhcc-cccccccCccCccHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEeec--CCc
Confidence            3   11221 11222 22  3467777777777766643   246788899999999998773  22    2122  235


Q ss_pred             eEEEEEecCCCcchHHHHHHHhhcCceeccC--cccchhhh
Q psy10669        251 HLILIDLRKNKLTGSKVELVLEEIAIACNKN--TGISLAAE  289 (337)
Q Consensus       251 h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~--~girig~~  289 (337)
                      .++.+++.... ....+.+.|.+.||.+.+.  ..|||..+
T Consensus       410 ~~~~~~~~~~~-~~~~~~~~l~~~Gv~~~~~g~~~iRi~~~  449 (472)
T 1ohv_A          410 TFCSFDTPDES-IRNKLISIARNKGVMLGGCGDKSIRFRPT  449 (472)
T ss_dssp             TEEEEECSSHH-HHHHHHHHHHHTTEECEEETTTEEEECCC
T ss_pred             eEEEEEeCChh-HHHHHHHHHHHCCeEEecCCCCEEEEECC
Confidence            56667665321 3456667777789998764  26777544

>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*

Probab=97.87  E-value=0.00015  Score=71.56  Aligned_cols=147  Identities=14%  Similarity=0.072  Sum_probs=79.2

Q ss_pred             ChHHHHHHhhhcCCeEEEeccccc-cccc--------ee----eeecc--CCc-----hhhh-hHHHHHhhccCCCCCCC
Q psy10669        139 DYARFRQICDETDSIMFADMSHIS-GLIA--------GV----KGVTK--TGE-----KILY-DYEEKINNAVFPSLQGG  197 (337)
Q Consensus       139 d~~~l~eia~~~ga~l~vD~AH~~-Gli~--------g~----~~T~~--~Gg-----~i~~-~l~~~i~~~~~p~~~g~  197 (337)
                      =++.|+++|+++|++||+|+-|+- |=.+        |+    +..+|  .||     ++.. ++.+.+.+....++++ 
T Consensus       248 fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~a~e~~gv~PDivt~gK~lggg~P~~av~~~~~i~~~~~~~~~~~Tf~-  326 (456)
T 4atq_A          248 FLPALSEWAKEKGIVFIADEVQSGFCRTGEWFAVDHEGVVPDIITMAKGIAGGLPLSAITGRADLLDAVHPGGLGGTYG-  326 (456)
T ss_dssp             HHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEEEECGGGGTTSSCEEEEEEHHHHTTSCTTSSCCSSS-
T ss_pred             hhHHHHHHHhhcCCceEecccccccCCccccccccccCCCCchhhhhhcccCcCCceeeEecHHHHhcccccCCCCCCC-
Confidence            366799999999999999999864 3333        11    11112  123     2222 4544444443334443 


Q ss_pred             CcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-------CCEEecC-CCCCeEEEEEecCCC---cc---
Q psy10669        198 PHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-------GYHVVTG-GTDVHLILIDLRKNK---LT---  263 (337)
Q Consensus       198 ~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-------G~~v~~~-~t~~h~v~V~~~~~~---~~---  263 (337)
                      .|+...|+..+.+..+.++   ...+++.+..++|.++|++.       +.++++. -...-+.-|++....   -+   
T Consensus       327 gnpla~aaala~L~~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~~v~~VRG~Gl~~giel~~~~~~~~~~~~  403 (456)
T 4atq_A          327 GNPVACAAALAAIDTMEQH---DLNGRARHIEELALGKLRELAAELSAGGGSVVGDIRGRGAMLAIELVQPGSKEPNAEL  403 (456)
T ss_dssp             SCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHHHCC-----CEEEEEEETTEEEEEEBCTTSCCBCHHH
T ss_pred             CChHHHHhhHHHHHHHhhc---cHHHHHHHHHHHHHHHHHHHHHhcccccCCceEEeeecceEEEEEEecCCCCCcCHHH
Confidence            4666666666667666432   45667777777777777652       1122210 001113445553221   11   


Q ss_pred             hHHHHHHHhhcCceeccCc----ccchhhh
Q psy10669        264 GSKVELVLEEIAIACNKNT----GISLAAE  289 (337)
Q Consensus       264 ~~~~~~~L~~~gI~v~~~~----girig~~  289 (337)
                      ...+.+.|.+.|+.+....    -|||.-+
T Consensus       404 ~~~v~~~~~~~Gvl~~~~g~~~~~irl~Pp  433 (456)
T 4atq_A          404 TKAVAAACLKEGVIILTCGTYGNVIRLLPP  433 (456)
T ss_dssp             HHHHHHHHHHTTEECEEECTTSCEEEECCC
T ss_pred             HHHHHHHHHHCCCEEEecCCCCCEEEEECC
Confidence            2345566667799886432    4777644

>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*

Probab=97.76  E-value=7.2e-05  Score=71.65  Aligned_cols=147  Identities=9%  Similarity=0.006  Sum_probs=84.5

Q ss_pred             ccEEEEc-Ccc-cccccChHHHHHHhhh-cC--CeEEEeccccccccc---------eeeeec-c----CC---chhhh-
Q psy10669        124 FDFLSSG-TTC-YSRCLDYARFRQICDE-TD--SIMFADMSHISGLIA---------GVKGVT-K----TG---EKILY-  180 (337)
Q Consensus       124 pklII~~-~S~-~~~~~d~~~l~eia~~-~g--a~l~vD~AH~~Gli~---------g~~~T~-~----~G---g~i~~-  180 (337)
                      +|+|++. +++ .+...+     +||++ ++  +++++|++|..+-..         .+.+|. |    .|   |+++. 
T Consensus       158 ~k~v~l~~p~NPtG~~~~-----~l~~~~~~~~~~ii~De~y~~~~~~~l~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~  232 (391)
T 3bwn_A          158 PYIELVTSPNNPDGTIRE-----TVVNRPDDDEAKVIHDFAYYWPHYTPITRRQDHDIMLFTFSKITGHAGSRIGWALVK  232 (391)
T ss_dssp             CEEEEEESSCTTTCCCCC-----CCC-----CCCEEEEECTTCSTTTSCCCCCBCCSEEEEEHHHHHSCGGGCEEEEEEC
T ss_pred             CEEEEECCCCCCCchhHH-----HHHHHhhcCCCEEEEeCCCCCCCCCccccCCCCeEEEEechhhcCCCccceEEEEec
Confidence            6777554 433 123333     45555 66  999999999754211         123333 2    23   66653 


Q ss_pred             --hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHh---------chhhHHHHHHHHHHHHHHHHHHHhC-CCEEecC-C
Q psy10669        181 --DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQ---------SDEFKSYQAQVKANASHLSDEMIKR-GYHVVTG-G  247 (337)
Q Consensus       181 --~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~---------~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~-~  247 (337)
                        ++.+.+..... ....+++.+...+++.++..-.         +...++.++++.++.++|.+.|.+. |+++... +
T Consensus       233 ~~~l~~~l~~~~~-~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~  311 (391)
T 3bwn_A          233 DKEVAKKMVEYII-VNSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVVKESDAFTLPKYPE  311 (391)
T ss_dssp             CHHHHHHHHHHHH-HHHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTCSSEECCCCCC
T ss_pred             CHHHHHHHHHHhc-ccccCCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccCCc
Confidence              46555544321 1123556666666666665532         2345677888899999999999986 6665431 1


Q ss_pred             CC-----------CeEEEEEecCCCcchHHHHHHHhhcCceecc
Q psy10669        248 TD-----------VHLILIDLRKNKLTGSKVELVLEEIAIACNK  280 (337)
Q Consensus       248 t~-----------~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~  280 (337)
                      +.           .-.+++++..    ...+...|++.||.+.+
T Consensus       312 ~~~~f~~~~~~~~g~~~~~~~~~----~~~~~~~l~~~gV~v~p  351 (391)
T 3bwn_A          312 AFCNYFGKSLESYPAFAWLGTKE----ETDLVSELRRHKVMSRA  351 (391)
T ss_dssp             EEETTTTEEECCCCSEEEEEESS----SCCHHHHHHHTTEECEE
T ss_pred             cccccccccCCCcceEEEecCCc----HHHHHHHHHHCCEEEcc
Confidence            11           1146777753    23566788889999987

>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A

Probab=97.64  E-value=0.0024  Score=63.26  Aligned_cols=143  Identities=12%  Similarity=0.116  Sum_probs=78.9

Q ss_pred             ChHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeecc--CCc------hhhh-hHHHHHhhc------c
Q psy10669        139 DYARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTK--TGE------KILY-DYEEKINNA------V  190 (337)
Q Consensus       139 d~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~--~Gg------~i~~-~l~~~i~~~------~  190 (337)
                      =++.|++||+++|++||+|+-++ .|=.+        |    ++...|  .||      ++.. ++.+.+...      .
T Consensus       258 fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDi~t~~K~l~gG~~Pl~av~~~~~i~~~~~~~~~~~~~~  337 (473)
T 4e3q_A          258 YFQAILPILRKYDIPVISDEVICGFGRTGNTWGCVTYDFTPDAIISSKNLTAGFFPMGAVILGPELSKRLETAIEAIEEF  337 (473)
T ss_dssp             HHHHHHHHHHHTTCCEEEECTTTSSSTTSSSCHHHHTTCCCSEEEECGGGGTTSSCCEEEEECHHHHHHHHHHHHHHSCC
T ss_pred             HHHHHHHHhcccceEEeccCccccCCcccchhHHHhcCCCCChHHhcccccCCCCCcccccccHHHHHHhcccccccccc
Confidence            36679999999999999999986 23222        1    122223  234      3333 454444321      1


Q ss_pred             CCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC----CCE-EecCCCCCeEEEEEecCCC----
Q psy10669        191 FPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR----GYH-VVTGGTDVHLILIDLRKNK----  261 (337)
Q Consensus       191 ~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~----G~~-v~~~~t~~h~v~V~~~~~~----  261 (337)
                      +.+.+-+.|+.+.|+..+.+..+.+   +...+++.+..++|.++|++.    ++. |-+   ..-+.-|.+....    
T Consensus       338 ~hg~T~~Gnpla~Aaala~L~~i~~---~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vRG---~Gl~~gielv~~~~~~~  411 (473)
T 4e3q_A          338 PHGFTASGHPVGCAIALKAIDVVMN---EGLAENVRRLAPRFEERLKHIAERPNIGEYRG---IGFMWALEAVKDKASKT  411 (473)
T ss_dssp             CCCCTTTTCHHHHHHHHHHHHHHHH---SSHHHHHHHHHHHHHHHHHHHTTSTTEEEEEE---ETTEEEEEECSBTTTTB
T ss_pred             ccCCCCCCCcchhhhhhhhhhhhcc---ccHHHHHHHHHHHHHHHHHHHhcCCCeeEEee---cceEEEEEEecCccccc
Confidence            2222224566666666666666643   245677888888888888762    111 111   1113334432111    


Q ss_pred             ------cchHHHHHHHhhcCceeccCc-ccchh
Q psy10669        262 ------LTGSKVELVLEEIAIACNKNT-GISLA  287 (337)
Q Consensus       262 ------~~~~~~~~~L~~~gI~v~~~~-girig  287 (337)
                            ..+..+.+.+.+.|+.+.+.. .|||.
T Consensus       412 ~~~~~~~~~~~~~~~~~~~Gll~~~~g~~i~l~  444 (473)
T 4e3q_A          412 PFDGNLSVSERIANTCTDLGLICRPLGQSVVLC  444 (473)
T ss_dssp             CCCGGGCHHHHHHHHHHHTTEECEEETTEEEEC
T ss_pred             cccccHHHHHHHHHHHHHCCcEEEecCCEEEEe
Confidence                  113456677777899987543 56654

>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*

Probab=97.01  E-value=0.021  Score=57.35  Aligned_cols=39  Identities=15%  Similarity=0.119  Sum_probs=26.9

Q ss_pred             ccEEEEc-Ccc-cccccChHH---HHHHh--hhcCCeEEEeccccc
Q psy10669        124 FDFLSSG-TTC-YSRCLDYAR---FRQIC--DETDSIMFADMSHIS  162 (337)
Q Consensus       124 pklII~~-~S~-~~~~~d~~~---l~eia--~~~ga~l~vD~AH~~  162 (337)
                      +|+|++. +++ .+...+.++   |.++|  +++|+++++|++|.-
T Consensus       246 ~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~  291 (546)
T 2zy4_A          246 IKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGT  291 (546)
T ss_dssp             EEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGG
T ss_pred             CeEEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchh
Confidence            5666654 322 245666554   56777  789999999999974

>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*

Probab=96.98  E-value=0.0039  Score=60.41  Aligned_cols=229  Identities=8%  Similarity=-0.088  Sum_probs=118.3

Q ss_pred             cceeeeccCCCC--CHHHHHHHhhhhhhc--cCCCCCCCcCcCccchHHHHHHHHHHHHHhhcC------CCCCCCccee
Q psy10669         31 NGIELIASENFT--SLAVLECLGSCLQNK--YSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFN------LDPEQWGCNV  100 (337)
Q Consensus        31 ~~i~l~asen~~--~p~V~~a~~~~l~~~--y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg------~~~~~~~~~v  100 (337)
                      ..|+|-..++-.  ++.+++++...+...  ...+|+...  .|.....+++    +.++++++      .+.    -+|
T Consensus        57 ~~i~l~~g~~~~~~~~~v~~a~~~~l~~~~~~~~~Y~~~~--~G~~~~~~lr----~aia~~~~~~~~~~~~~----~~i  126 (427)
T 2hox_A           57 CSADVASGDGLFLEEYWKQHKEASAVLVSPWHRMSYFFNP--VSNFISFELE----KTIKELHEVVGNAAAKD----RYI  126 (427)
T ss_dssp             CCEECCSCCCGGGHHHHTTSHHHHCEEECTTTTCSSSCSS--CCTTCCHHHH----HHHHHHHHHHTCBCCTT----CEE
T ss_pred             ceEEecCcCCCCCCCHHHHHhHHhhhhcCCcccccCCCCC--CCccchHHHH----HHHHHHHHHhCCcCCCC----CEE
Confidence            346666666654  345666665443211  001122211  1322235555    34455554      333    257


Q ss_pred             ecCCC-chhHHHHHHhh--------CCc---------------------------------cc--c---cccEEEEc-Cc
Q psy10669        101 QPYSG-SPANFAVCEKA--------LPT---------------------------------NN--A---RFDFLSSG-TT  132 (337)
Q Consensus       101 ~~~Sg-t~AN~~v~~aL--------l~~---------------------------------~~--a---~pklII~~-~S  132 (337)
                      .+++| ++|+..++.+|        +++                                 .+  +   ++|+|++. ++
T Consensus       127 v~t~G~~~al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~~l~~~~~~~~k~v~l~~p~  206 (427)
T 2hox_A          127 VFGVGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKGYVWAGNAANYVNVSNPEQYIEMVTSPN  206 (427)
T ss_dssp             EEESHHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHHHSCBTTEEEEEEGGGGTTCSCGGGEEEEEESSC
T ss_pred             EEeCCHHHHHHHHHHHHhhccccccCCCCCEEEEeCCCcccHHHHHHHcCCeeeeecCCHHHHHHhhcCCceEEEEcCCC
Confidence            77777 67888888998        664                                 11  1   26776664 43


Q ss_pred             c-cccccChHHHHHHhhhcCCeEEEeccccccc---c---c---eeeeec-c-------CCchhhh---hHHHHHhhccC
Q psy10669        133 C-YSRCLDYARFRQICDETDSIMFADMSHISGL---I---A---GVKGVT-K-------TGEKILY---DYEEKINNAVF  191 (337)
Q Consensus       133 ~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gl---i---~---g~~~T~-~-------~Gg~i~~---~l~~~i~~~~~  191 (337)
                      + .+...+ +    +++  +...++|+++.-..   .   .   .+.+|. |       +.|+++.   ++.+.+.....
T Consensus       207 NPtG~~~~-~----~l~--~~~~i~d~~~~~~~~s~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~l~~~l~~~~~  279 (427)
T 2hox_A          207 NPEGLLRH-A----VIK--GCKSIYDMVYYWPHYTPIKYKADEDILLFTMSKFTGHSGSRFGWALIKDESVYNNLLNYMT  279 (427)
T ss_dssp             TTTCCCCC-C----SST--TCEEEEECTTCSTTTSCCCSCBCCSEEEEEHHHHTSCGGGCCEEEEECCHHHHHHHHHHHH
T ss_pred             CCcccccH-H----HHc--CCCEEEeecccCCCCCccccCCCceEEEEeChhcCCCCCceEEEEEECCHHHHHHHHHHHH
Confidence            3 234444 2    333  45678888653211   1   1   123332 1       2366654   46665554322


Q ss_pred             CCCCCCCcHHHHHHHHHHHHHHh----------chhhHHHHHHHHHHHHHHHHHHHhC-CCEE--ec-C----------C
Q psy10669        192 PSLQGGPHNHAIGAIATAMLQAQ----------SDEFKSYQAQVKANASHLSDEMIKR-GYHV--VT-G----------G  247 (337)
Q Consensus       192 p~~~g~~~~~~iaala~a~~e~~----------~~~~~~y~~~v~~na~~l~~~L~~~-G~~v--~~-~----------~  247 (337)
                      +... +++.....+++.++....          +...++.++++.++.++|.+.|.+. |+.+  +. .          .
T Consensus       280 ~~~~-~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~p  358 (427)
T 2hox_A          280 KNTE-GTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRP  358 (427)
T ss_dssp             HHTS-SCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEECCCCCSCEEETTTTEEEC
T ss_pred             hcCC-CCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhCcCccccccccccccccccccCC
Confidence            2223 334444444444554321          1223456788889999999999886 8876  11 0          1


Q ss_pred             CCCeEEEEEecCCCcchHH-HHHHHhhcCceecc
Q psy10669        248 TDVHLILIDLRKNKLTGSK-VELVLEEIAIACNK  280 (337)
Q Consensus       248 t~~h~v~V~~~~~~~~~~~-~~~~L~~~gI~v~~  280 (337)
                      .-...+++++..   +..+ +...|++.||.+.+
T Consensus       359 ~~g~f~~~~~~~---~~~~~~~~ll~~~gI~v~p  389 (427)
T 2hox_A          359 PSPSYAWVKCEW---EEDKDCYQTFQNGRINTQN  389 (427)
T ss_dssp             CCCSEEEEEECS---GGGCSHHHHHHHTTEECEE
T ss_pred             CCceEEEEECCC---cHHHHHHHHHHHCCEEEcC
Confidence            124457788764   2333 34455678999876

>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}

Probab=96.98  E-value=0.18  Score=48.88  Aligned_cols=66  Identities=9%  Similarity=0.036  Sum_probs=40.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhCCCEE----ecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCcccchhhhhH
Q psy10669        217 EFKSYQAQVKANASHLSDEMIKRGYHV----VTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNTGISLAAEIQ  291 (337)
Q Consensus       217 ~~~~y~~~v~~na~~l~~~L~~~G~~v----~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~girig~~~~  291 (337)
                      +.+.+++++.+.-+.|.+.|.+.|..-    +.  .+.=+..    -.+++..++ ++|+++||++-+  +-||....+
T Consensus       329 ~~~~m~~r~~~~R~~l~~~L~~~g~~~~~~~i~--~q~GmF~----~~gls~e~v-~~L~e~~Vy~~~--~gRis~Agl  398 (420)
T 4h51_A          329 ELSAMAERIRTMRRTVYDELLRLQTPGSWEHVI--NQIGMFS----FLGLSKAQC-EYCQNHNIFITV--SGRANMAGL  398 (420)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHH--HCCSSEE----ECCCCHHHH-HHHHHTTEECCT--TCEEEGGGC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCCCCCeec--CCCceEE----ecCcCHHHH-HHHHhCCEEEcC--CCEEEeccC
Confidence            446777888888888999998876321    11  0000111    124555555 678889999877  458865443

>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0

Probab=96.73  E-value=0.16  Score=48.69  Aligned_cols=156  Identities=11%  Similarity=0.040  Sum_probs=83.5

Q ss_pred             ccEEEEcCc-cc--ccccChHH---HHHHhhhcCCeEEEeccccc---c-c------c----c-----eeeeec-c----
Q psy10669        124 FDFLSSGTT-CY--SRCLDYAR---FRQICDETDSIMFADMSHIS---G-L------I----A-----GVKGVT-K----  173 (337)
Q Consensus       124 pklII~~~S-~~--~~~~d~~~---l~eia~~~ga~l~vD~AH~~---G-l------i----~-----g~~~T~-~----  173 (337)
                      +++|++..+ .+  +...+.++   |.++|+++|.+++.|+++.-   | .      +    .     .++.+. |    
T Consensus       174 ~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l  253 (405)
T 3k7y_A          174 GSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKNIAFSVCQSFSKNMSL  253 (405)
T ss_dssp             SCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHTTTCCEEEEEECTTTSCC
T ss_pred             CeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHhcCCcEEEEeeCCccCCC
Confidence            468887643 35  46666665   45778899999999999751   1 1      0    0     122332 2    


Q ss_pred             ---CCchhh---h--hHHHH----HhhccCCCCCCCCcHHHHHHHHHHHHHH--h---chhhHHHHHHHHHHHHHHHHHH
Q psy10669        174 ---TGEKIL---Y--DYEEK----INNAVFPSLQGGPHNHAIGAIATAMLQA--Q---SDEFKSYQAQVKANASHLSDEM  236 (337)
Q Consensus       174 ---~Gg~i~---~--~l~~~----i~~~~~p~~~g~~~~~~iaala~a~~e~--~---~~~~~~y~~~v~~na~~l~~~L  236 (337)
                         +-|+++   .  ++.+.    +....... .++++....++.+.++.+-  .   ..+.+++++++.++-+.|.+.|
T Consensus       254 ~GlRiG~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~q~~~~~~l~~~~l~~~~~~~l~~~~~~~~~~R~~l~~~L  332 (405)
T 3k7y_A          254 YGERAGALHIVCKNQEEKKIVFNNLCFIVRKF-YSSPVIHTNRILCQLLNNQNLKLNWIKELSQLSQRITNNRILFFNKL  332 (405)
T ss_dssp             TTTTEEEEEEECSSHHHHHHHHHHHHHHHHTT-TSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccceEEEEEeCCHHHHHHHHHHHHHHHhcc-cCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence               225542   1  33332    22221111 2344444444444433320  0   1234567788889999999999


Q ss_pred             H----hCC----CEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCcccchhhh
Q psy10669        237 I----KRG----YHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNTGISLAAE  289 (337)
Q Consensus       237 ~----~~G----~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~girig~~  289 (337)
                      .    +.|    +++... ..+--+++.+.     ...+ ..|+++||.+.+  |-||+..
T Consensus       333 ~~~~~~~g~~~~~~~~~p-~gg~f~~~~l~-----~~~~-~~L~~~gV~v~p--~~Ris~a  384 (405)
T 3k7y_A          333 ETYQKKYNLNYDWNVYKK-QRGLFSFVPLL-----AKIA-EHLKTHHIYIIN--NGRINVS  384 (405)
T ss_dssp             HHHGGGGTCCCCGGGGSS-CCSSEEECGGG-----GGGT-TTTTTTTEECCT--TSEEEGG
T ss_pred             HhhhhhcCCCCCCccccC-CceEEEecCCC-----HHHH-HHHHHCCEeecC--CCeEEEe
Confidence            9    776    354431 12223444333     2333 445778999988  4477643

>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*

Probab=96.61  E-value=0.003  Score=66.78  Aligned_cols=163  Identities=13%  Similarity=0.081  Sum_probs=85.0

Q ss_pred             ccEEEEcCcccc---cccC----hHHHHHHhhhcCCeEEEecccc-ccccc--------ee---eeec-c--CCch----
Q psy10669        124 FDFLSSGTTCYS---RCLD----YARFRQICDETDSIMFADMSHI-SGLIA--------GV---KGVT-K--TGEK----  177 (337)
Q Consensus       124 pklII~~~S~~~---~~~d----~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g~---~~T~-~--~Gg~----  177 (337)
                      ...||+.+-..+   +..+    +++|+++|+++|++||+|+.|+ .|-.+        |+   ..|. |  .||+    
T Consensus       595 iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDiitlsK~L~gG~~Plg  674 (831)
T 4a0g_A          595 VGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVETTTELLGCKPDIACFAKLLTGGMVPLA  674 (831)
T ss_dssp             EEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSSTHHHHSSCCSEEEECGGGGTTSSCCE
T ss_pred             EEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCCchhhHhcCCCCcEEEEecccccCccCcE
Confidence            357777542122   3322    6789999999999999999876 44444        11   1122 2  1343    


Q ss_pred             -hhh--hHHHHHhhc-----cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHH--------HHHHHHhCC-
Q psy10669        178 -ILY--DYEEKINNA-----VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASH--------LSDEMIKRG-  240 (337)
Q Consensus       178 -i~~--~l~~~i~~~-----~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~--------l~~~L~~~G-  240 (337)
                       +++  ++.+.+...     .+-+.+-+.|+...|+..+++..+.++.   ..+++.++.++        +.+.+.+.. 
T Consensus       675 av~~~~~i~~~~~~~~~~~~~~hg~T~~g~Pla~Aaala~L~~i~~~~---l~~~~~~~~~~l~~~l~~~l~~~l~~~~~  751 (831)
T 4a0g_A          675 VTLATDAVFDSFSGDSKLKALLHGHSYSAHAMGCATAAKAIQWFKDPE---TNHNITSQGKTLRELWDEELVQQISSHSA  751 (831)
T ss_dssp             EEEECHHHHHTTCSSCGGGSCCCCCTTTTCHHHHHHHHHHHHHHHCTT---TCTTBCTTSSBBCCCSCHHHHHHHHHSTT
T ss_pred             EEEECHHHHHHHhcccccccceeecCCcccHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence             333  566655432     1122233456666666666666654322   33444444343        333444432 


Q ss_pred             CEEecCCCCCeEEEEEecCC-------CcchHHHHHHHhhcCceeccCc-ccchhhhhH
Q psy10669        241 YHVVTGGTDVHLILIDLRKN-------KLTGSKVELVLEEIAIACNKNT-GISLAAEIQ  291 (337)
Q Consensus       241 ~~v~~~~t~~h~v~V~~~~~-------~~~~~~~~~~L~~~gI~v~~~~-girig~~~~  291 (337)
                      +.-+.  ....++.|.+...       ...+..+.+.|.+.||.+++.. -|||..+..
T Consensus       752 v~~vr--g~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gv~v~p~g~~lrl~pp~~  808 (831)
T 4a0g_A          752 VQRVV--VIGTLFALELKADASNSGYASLYAKSLLIMLREDGIFTRPLGNVIYLMCGPC  808 (831)
T ss_dssp             EEEEE--EETTEEEEEEC---------CHHHHHHHHHHHHTTEECCCBTTEEEEECCTT
T ss_pred             ceeEe--ecccEEEEEEecCccccccchHHHHHHHHHHHHCCcEEEecCCEEEEECCCC
Confidence            22111  1233555555332       1134567777888899998643 677764443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	337
d1rv3a_	470	c.67.1.4 (A:) Serine hydroxymethyltransferase {Rab	2e-94
d2a7va1	463	c.67.1.4 (A:26-488) Serine hydroxymethyltransferas	3e-88
d1kl1a_	405	c.67.1.4 (A:) Serine hydroxymethyltransferase {Bac	1e-86
d1dfoa_	416	c.67.1.4 (A:) Serine hydroxymethyltransferase {Esc	3e-82
d1c7ga_	456	c.67.1.2 (A:) Tyrosine phenol-lyase {Erwinia herbi	4e-06
d1m6sa_	343	c.67.1.1 (A:) Low-specificity threonine aldolase {	0.001
d1c4ka2	462	c.67.1.5 (A:108-569) Ornithine decarboxylase major	0.002

>d1rv3a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 470

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  286 bits (733), Expect = 2e-94
 Identities = 170/467 (36%), Positives = 221/467 (47%), Gaps = 132/467 (28%)

Query: 2   SSSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEG 61
           S   ML   L  +D E+Y +IKKE +RQ  G+ELIASENF S AVLE LGSCL NKYS G
Sbjct: 3   SHEQMLAQPLKDSDAEVYDIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSLG 62

Query: 62  LPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPTNN 121
            PG+RYYGG + IDE+E + Q+R+L+A+ LDP+ WG NVQPYSGSPANFAV    +  + 
Sbjct: 63  YPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPYSGSPANFAVYTALVEPHG 122

Query: 122 --ARFDFLSSGTTCYSRC--------------------------LDYARFRQ-------- 145
                D    G   +                             +DY R  +        
Sbjct: 123 RIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDTGYIDYDRLEENARLFHPK 182

Query: 146 --------------------ICDETDSIMFADMSHISGLIAG------------------ 167
                               I DE  + + ADM+HISGL+                    
Sbjct: 183 LIIAGTSCYSRNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFEHCHVVTTTTH 242

Query: 168 -----------------VKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAM 210
                                 KTG++ILY+ E  IN+AVFP LQGGPHNHAI  +A A+
Sbjct: 243 KTLRGCRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVAL 302

Query: 211 LQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELV 270
            QA + EFK YQ QV AN   LS  +++ GY +VTGG+D HLIL+DLR     G + E V
Sbjct: 303 KQAMTPEFKEYQRQVVANCRALSAALVELGYKIVTGGSDNHLILVDLRSKGTDGGRAEKV 362

Query: 271 LEEIAIACNKNT---------------------------------------GISLAAEIQ 291
           LE  +IACNKNT                                       GI L  +IQ
Sbjct: 363 LEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIELTVQIQ 422

Query: 292 AISGPK--LVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPGQAD 336
             +GP+  L +F+  L  +E   + V AL++E+E ++  F +PG   
Sbjct: 423 DDTGPRATLKEFKEKLAGDEKHQRAVRALRQEVESFAALFPLPGLPG 469

>d2a7va1 c.67.1.4 (A:26-488) Serine hydroxymethyltransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 463

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

 Score =  270 bits (691), Expect = 3e-88
 Identities = 163/456 (35%), Positives = 232/456 (50%), Gaps = 131/456 (28%)

Query: 8   HGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRY 67
             +L+ +DPE++ L+++EK RQ  G+ELIASENF S A LE LGSCL NKYSEG PGKRY
Sbjct: 5   QESLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRY 64

Query: 68  YGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPTNNAR---- 123
           YGG + +DEIE++ Q+R+L+AF+LDP QWG NVQPYSGSPAN AV    L  ++      
Sbjct: 65  YGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLD 124

Query: 124 ------------------------FDFLSSGTTCYSRCLDY------------------- 140
                                   F+ +       +  +DY                   
Sbjct: 125 LPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGT 184

Query: 141 ---------ARFRQICDETDSIMFADMSHISGLIAG------------------------ 167
                    AR R++CDE  + + ADM+HISGL+A                         
Sbjct: 185 SAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTLRGA 244

Query: 168 -----------VKGVTKTGEKILYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSD 216
                           KTG +I Y +E++IN AVFPSLQGGPHNHAI A+A A+ QA + 
Sbjct: 245 RSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTP 304

Query: 217 EFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAI 276
            F+ Y  QV  NA  ++D +++RGY +V+GGTD HL+L+DLR   L G++ E VLE ++I
Sbjct: 305 MFREYSLQVLKNARAMADALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSI 364

Query: 277 ACNKNT---------------------------------------GISLAAEIQAISGPK 297
             NKNT                                       G+++  E+++ +  K
Sbjct: 365 TANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNIGLEVKSKTA-K 423

Query: 298 LVDFQTCLHKNEDIVKKVAALKKEIEDYSNQFEMPG 333
           L DF++ L K+ +  +++A L++ +E ++  F MPG
Sbjct: 424 LQDFKSFLLKDSETSQRLANLRQRVEQFARAFPMPG 459

>d1kl1a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Bacillus stearothermophilus [TaxId: 1422]} Length = 405

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score =  264 bits (676), Expect = 1e-86
 Identities = 116/344 (33%), Positives = 173/344 (50%), Gaps = 75/344 (21%)

Query: 10  TLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYG 69
            L Q DP++++ I++E+ RQ   IELIASENF S AV+E  GS L NKY+EG PG+RYYG
Sbjct: 3   YLPQQDPQVFAAIEQERKRQHAKIELIASENFVSRAVMEAQGSVLTNKYAEGYPGRRYYG 62

Query: 70  GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPTNN-------- 121
           G +++D +E +A++R+ + F  +      NVQP+SG+ AN AV    L   +        
Sbjct: 63  GCEYVDIVEELARERAKQLFGAEH----ANVQPHSGAQANMAVYFTVLEHGDTVLGMNLS 118

Query: 122 -------------------------------------------ARFDFLSSGTTCYSRCL 138
                                                       R   + +  + Y R +
Sbjct: 119 HGGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYDDVREKARLHRPKLIVAAASAYPRII 178

Query: 139 DYARFRQICDETDSIMFADMSHISGLIAG--------------------VKGVTKTGEKI 178
           D+A+FR+I DE  + +  DM+HI+GL+A                     ++G        
Sbjct: 179 DFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPRGGMILC 238

Query: 179 LYDYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK 238
              + ++I+ A+FP +QGGP  H I A A A  +A  D+FK+Y  +V  NA  L+  +  
Sbjct: 239 QEQFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQN 298

Query: 239 RGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
            G+ +V+GGTD HL+L+DLR  +LTG   E VL+E+ I  NKNT
Sbjct: 299 EGFTLVSGGTDNHLLLVDLRPQQLTGKTAEKVLDEVGITVNKNT 342

>d1dfoa_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Escherichia coli [TaxId: 562]} Length = 416

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Escherichia coli [TaxId: 562]

 Score =  253 bits (648), Expect = 3e-82
 Identities = 106/342 (30%), Positives = 158/342 (46%), Gaps = 69/342 (20%)

Query: 10  TLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYG 69
            +A  D EL+  +++EK RQ   IELIASEN+TS  V++  GS L NKY+EG PGKRYYG
Sbjct: 6   NIADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYG 65

Query: 70  GNQFIDEIEIVAQQRSLKAFNLDPEQWGC------------------------------- 98
           G +++D +E +A  R+ + F  D                                     
Sbjct: 66  GCEYVDIVEQLAIDRAKELFGADYANVQPHSGSQANFAVYTALLEPGDTVLGMNLAHGGH 125

Query: 99  --NVQPYSGSPANFAV-------------CEKALPTNNARFDFLSSGTTCYSRCLDYARF 143
             +  P + S   + +              +        +   +  G + YS  +D+A+ 
Sbjct: 126 LTHGSPVNFSGKLYNIVPYGIDATGHIDYADLEKQAKEHKPKMIIGGFSAYSGVVDWAKM 185

Query: 144 RQICDETDSIMFADMSHISGLIA-----------------------GVKGVTKTGEKILY 180
           R+I D   + +F DM+H++GL+A                       G +G     +    
Sbjct: 186 REIADSIGAYLFVDMAHVAGLVAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLILAKGGSE 245

Query: 181 DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRG 240
           +  +K+N+AVFP  QGGP  H I   A A+ +A   EFK+YQ QV  NA  + +  ++RG
Sbjct: 246 ELYKKLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKTYQQQVAKNAKAMVEVFLERG 305

Query: 241 YHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT 282
           Y VV+GGTD HL L+DL    LTG + +  L    I  NKN+
Sbjct: 306 YKVVSGGTDNHLFLVDLVDKNLTGKEADAALGRANITVNKNS 347

>d1c7ga_ c.67.1.2 (A:) Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 549]} Length = 456

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tyrosine phenol-lyase
species: Erwinia herbicola [TaxId: 549]

 Score = 45.9 bits (108), Expect = 4e-06
 Identities = 26/196 (13%), Positives = 54/196 (27%), Gaps = 43/196 (21%)

Query: 129 SGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIAGVK------------------- 169
                     +     ++       +F D +        +K                   
Sbjct: 186 LAGGQPVSMANMRAVHEMASTYGIKIFYDATRCVENAYFIKEQEAGYENVSIKDIVHEMF 245

Query: 170 ----GVTKTGEKILY------------DYEEKINNAV----FPSLQGGPHNHAIGAIATA 209
               G T +G+K               +        V         GG     + A+A  
Sbjct: 246 SYADGCTMSGKKDCLVNIGGFLCMNDEEMFSAAKELVVVYEGMPSYGGLAGRDMEAMAIG 305

Query: 210 MLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVEL 269
           + +A   E   Y         +L D++ + G  +V   T  H + +D R+     ++ + 
Sbjct: 306 LREAMQYE---YIEHRVKQVRYLGDKLREAGVPIVEP-TGGHAVFLDARRFCPHLTQDQF 361

Query: 270 VLEEIAIACNKNTGIS 285
             + +A +    TG+ 
Sbjct: 362 PAQSLAASIYMETGVR 377

>d1m6sa_ c.67.1.1 (A:) Low-specificity threonine aldolase {Thermotoga maritima [TaxId: 2336]} Length = 343

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Thermotoga maritima [TaxId: 2336]

 Score = 37.4 bits (85), Expect = 0.001
 Identities = 15/130 (11%), Positives = 34/130 (26%), Gaps = 14/130 (10%)

Query: 198 PHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDL 257
                   +  A       +      +   NA  L+ ++ + GY V       +++++  
Sbjct: 227 GGGMRQAGVLAAAGIIALTKMVDRLKEDHENARFLALKLKEIGYSVNPEDVKTNMVILRT 286

Query: 258 RKNKLTGSKVELVLEEIAIACNKNTGISLAAEIQAISGPKLVDFQTCL-HKNEDIVKKVA 316
              K+        L    +  N                   +   T       DI + + 
Sbjct: 287 DNLKVNAHGFIEALRNSGVLANA-------------VSDTEIRLVTHKDVSRNDIEEALN 333

Query: 317 ALKKEIEDYS 326
             +K    +S
Sbjct: 334 IFEKLFRKFS 343

>d1c4ka2 c.67.1.5 (A:108-569) Ornithine decarboxylase major domain {Lactobacillus sp., strain 30a [TaxId: 1591]} Length = 462

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Ornithine decarboxylase major domain
domain: Ornithine decarboxylase major domain
species: Lactobacillus sp., strain 30a [TaxId: 1591]

 Score = 37.3 bits (85), Expect = 0.002
 Identities = 14/99 (14%), Positives = 24/99 (24%), Gaps = 20/99 (20%)

Query: 30  INGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQF-IDEIEIV-------- 80
              ++   S            G     K+  G     ++G   F  D             
Sbjct: 4   FKSLKEYVSRYLIQFDCPGHQGGQYYRKHPAGREFYDFFGETVFRADLCNADVALGDLLI 63

Query: 81  -------AQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV 112
                  A++ + + +N D             S AN  V
Sbjct: 64  HEGPAVAAEKHAARVYNADK----TYFVLGGSSNANNTV 98

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	337
d2a7va1	463	Serine hydroxymethyltransferase {Human (Homo sapie	100.0
d1rv3a_	470	Serine hydroxymethyltransferase {Rabbit (Oryctolag	100.0
d1dfoa_	416	Serine hydroxymethyltransferase {Escherichia coli	100.0
d1kl1a_	405	Serine hydroxymethyltransferase {Bacillus stearoth	100.0
d2bwna1	396	5-aminolevulinate synthase {Rhodobacter capsulatus	99.97
d1bs0a_	383	PLP-dependent acyl-CoA synthase (8-amino-7-oxonano	99.95
d1fc4a_	401	2-amino-3-ketobutyrate CoA ligase {Escherichia col	99.94
d1t3ia_	408	Probable cysteine desulfurase SufS {Synechocystis	99.71
d1m6sa_	343	Low-specificity threonine aldolase {Thermotoga mar	99.68
d1jf9a_	405	NifS-like protein/selenocysteine lyase {Escherichi	99.66
d2e7ja1	364	Selenocysteinyl-tRNA synthase (SepSecS) {Archaeogl	99.63
d1v72a1	345	Phenylserine aldolase PSALD {Pseudomonas putida [T	99.62
d1h0ca_	388	Alanine-glyoxylate aminotransferase {Human (Homo s	99.61
d1c4ka2	462	Ornithine decarboxylase major domain {Lactobacillu	99.6
d1c7ga_	456	Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 5	99.58
d1elua_	381	Cystine C-S lyase C-des {Synechocystis sp. [TaxId:	99.57
d2v1pa1	467	Tryptophan indol-lyase (tryptophanase) {Escherichi	99.55
d1p3wa_	391	Cysteine desulfurase IscS {Escherichia coli [TaxId	99.53
d1vjoa_	377	Alanine-glyoxylate aminotransferase {Cyanobacteria	99.5
d1m32a_	361	2-aminoethylphosphonate transaminase {Salmonella t	99.48
d1ax4a_	465	Tryptophan indol-lyase (tryptophanase) {Proteus vu	99.46
d1eg5a_	376	NifS-like protein/selenocysteine lyase {Thermotoga	99.45
d1mdoa_	376	Aminotransferase ArnB {Salmonella typhimurium [Tax	99.39
d1iuga_	348	Subgroup IV putative aspartate aminotransferase {T	99.37
d1svva_	340	Low-specificity threonine aldolase {Leishmania maj	99.35
d1qz9a_	404	Kynureninase {Pseudomonas fluorescens [TaxId: 294]	99.34
d2bkwa1	382	Alanine-glyoxylate aminotransferase {Baker's yeast	99.32
d2ch1a1	388	3-hydroxykynurenine transaminase {Malaria mosquito	99.3
d1pmma_	450	Glutamate decarboxylase beta, GadB {Escherichia co	99.28
d2fnua1	371	Spore coat polysaccharide biosynthesis protein C {	99.17
d1b9ha_	384	3-amino-5-hydroxybenzoic acid synthase (AHBA synth	99.14
d2z67a1	434	Selenocysteinyl-tRNA synthase (SepSecS) {Methanoco	99.07
d2c0ra1	361	Phosphoserine aminotransferase, PSAT {Bacillus cir	99.06
d1v2da_	368	Glutamine aminotransferase {Thermus thermophilus [	99.01
d1w23a_	360	Phosphoserine aminotransferase, PSAT {Bacillus alc	98.98
d2aeua1	366	Hypothetical protein MJ0158 {Archaeon Methanococcu	98.98
d1bjna_	360	Phosphoserine aminotransferase, PSAT {Escherichia	98.92
d1o69a_	374	Aminotransferase homolog WlaK (PglE, Cj1121c) {Cam	98.91
d3bc8a1	445	Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mu	98.87
d1b5pa_	382	Aspartate aminotransferase, AAT {Thermus thermophi	98.87
d1d2fa_	361	Modulator in mal gene expression, MalY {Escherichi	98.8
d1lc5a_	355	L-threonine-O-3-phosphate decarboxylase CobD {Salm	98.75
d1js3a_	476	DOPA decarboxylase {Pig (Sus scrofa) [TaxId: 9823]	98.72
d1gdea_	388	Aromatic aminoacid aminotransferase, AroAT {Archae	98.66
d1y4ia1	397	Methionine gamma-lyase, MGL {Citrobacter freundii	98.6
d1j32a_	388	Aspartate aminotransferase, AAT {Phormidium lapide	98.59
d1ibja_	380	Cystathionine beta-lyase, CBL {Thale cress (Arabid	98.56
d1gc0a_	392	Methionine gamma-lyase, MGL {Pseudomonas putida [T	98.55
d1cs1a_	384	Cystathionine gamma-synthase, CGS {Escherichia col	98.5
d1c7na_	394	Cystalysin {Treponema denticola [TaxId: 158]}	98.5
d1wsta1	403	Multiple substrate aminotransferase, MSAT {Thermoc	98.5
d1qgna_	398	Cystathionine gamma-synthase, CGS {Common tobacco	98.49
d1z7da1	404	Ornithine aminotransferase {Plasmodium yoelii yoel	98.46
d1cl1a_	391	Cystathionine beta-lyase, CBL {Escherichia coli [T	98.38
d2gb3a1	389	AAT homologue TM1698 {Thermotoga maritima [TaxId:	98.37
d1o4sa_	375	Aspartate aminotransferase, AAT {Thermotoga mariti	98.37
d2byla1	404	Ornithine aminotransferase {Human (Homo sapiens) [	98.33
d2f8ja1	334	Histidinol-phosphate aminotransferase HisC {Thermo	98.31
d1pffa_	331	Methionine gamma-lyase, MGL {Trichomonas vaginalis	98.27
d1vp4a_	420	Putative aminotransferase TM1131 {Thermotoga marit	98.26
d1fg7a_	354	Histidinol-phosphate aminotransferase HisC {Escher	98.23
d2ctza1	421	O-acetyl-L-homoserine sulfhydrylase {Thermus therm	98.21
d1m7ya_	431	1-aminocyclopropane-1-carboxylate synthase (ACC sy	98.19
d2gsaa_	427	Glutamate-1-semialdehyde aminomutase (aminotransfe	98.19
d1e5ea_	394	Methionine gamma-lyase, MGL {Trichomonas vaginalis	98.15
d1n8pa_	393	Cystathionine gamma-lyase (CYS3) {Baker's yeast (S	98.13
d1iaya_	428	1-aminocyclopropane-1-carboxylate synthase (ACC sy	98.13
d2r5ea1	418	Kynurenine--oxoglutarate transaminase I {Yellowfev	98.12
d1xi9a_	395	Putative alanine aminotransferase {Pyrococcus furi	98.06
d1vefa1	387	Acetylornithine/acetyl-lysine aminotransferase Arg	98.05
d1u08a_	382	Putative methionine aminotransferase YdbL {Escheri	97.95
d1w7la_	418	Kynurenine--oxoglutarate transaminase I {Human (Ho	97.93
d1s0aa_	429	Adenosylmethionine-8-amino-7-oxononanoate aminotra	97.8
d1wyua1	437	Glycine dehydrogenase (decarboxylating) subunit 1	97.72
d7aata_	401	Aspartate aminotransferase, AAT {Chicken (Gallus g	97.68
d1sffa_	425	4-aminobutyrate aminotransferase, GABA-aminotransf	97.63
d1ohwa_	461	4-aminobutyrate aminotransferase, GABA-aminotransf	97.61
d1zoda1	431	Dialkylglycine decarboxylase {Pseudomonas cepacia	97.5
d1bw0a_	412	Tyrosine aminotransferase (TAT) {Trypanosoma cruzi	97.42
d1wyub1	471	Glycine dehydrogenase subunit 2 (P-protein) {Therm	97.3
d1ajsa_	412	Aspartate aminotransferase, AAT {Pig (Sus scrofa),	96.92
d1yaaa_	412	Aspartate aminotransferase, AAT {Baker's yeast (Sa	96.12
d2ay1a_	394	Aromatic aminoacid aminotransferase, AroAT {Paraco	95.35
d3tata_	397	Aromatic aminoacid aminotransferase, AroAT {Escher	95.35
d2q7wa1	396	Aspartate aminotransferase, AAT {Escherichia coli	94.97
d2hoxa1	425	Alliinase {Garlic (Allium sativum) [TaxId: 4682]}	90.96

>d2a7va1 c.67.1.4 (A:26-488) Serine hydroxymethyltransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=100.00  E-value=1.4e-86  Score=650.01  Aligned_cols=330  Identities=50%  Similarity=0.850  Sum_probs=294.7

Q ss_pred             hhhhhhhhcHHHHHHHHHHHhhcccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHH
Q psy10669          7 LHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSL   86 (337)
Q Consensus         7 ~~~~l~~~d~~~~~~~~~e~~rq~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a   86 (337)
                      .+++|++.||||+++|++|.+||+++|+|||||||+||.|+++++|.|+|||++|+||.|||+||+++|+||.+|++|++
T Consensus         4 ~~~~L~~~D~ei~~~i~~e~~rq~~~l~LiaSEN~~S~~v~~algS~l~nkYaeG~pg~Ryy~G~~~iD~iE~la~~ra~   83 (463)
T d2a7va1           4 GQESLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRAL   83 (463)
T ss_dssp             SCCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHH
T ss_pred             ccCchhhhCHHHHHHHHHHHHHHhcCeeEeccCCcCCHHHHHHhcchhcccccCCCCCccccCCchhHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhcCCCCCCCcceeecCCCchhHHHHHHhhCCc-----------------------------------------------
Q psy10669         87 KAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT-----------------------------------------------  119 (337)
Q Consensus        87 ~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~-----------------------------------------------  119 (337)
                      ++||+++++||+||||+||++||++||.||++|                                               
T Consensus        84 ~lF~~~~a~w~vNVqp~SGs~An~av~~all~pgD~Im~l~l~~GGHlshg~~~~~~~~~~~g~~~~~~~Y~~d~~~~~I  163 (463)
T d2a7va1          84 EAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLI  163 (463)
T ss_dssp             HHTTCCTTTEEEECCCSSHHHHHHHHHHHHCCSCEECCC-------------------------------CCBCTTTCSB
T ss_pred             HHhCCCchhccCCccccccHHHHHHHHHHHcCCCceEEeeccCcCcccccccccccccccceeeEeeeeeeeccCCCCcC
Confidence            999999999999999999999999999999876                                               


Q ss_pred             ------ccc---cccEEEEcCcccccccChHHHHHHhhhcCCeEEEeccccccccce------------eeee-c-----
Q psy10669        120 ------NNA---RFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIAG------------VKGV-T-----  172 (337)
Q Consensus       120 ------~~a---~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~g------------~~~T-~-----  172 (337)
                            +++   +||+||+|.|+|++++|+++|++||+++|++||+|+||.+|||++            +++| |     
T Consensus       164 Dyd~~~~~a~~~kPklIi~G~S~y~r~~d~~~~reIad~vga~l~~D~aH~aGLIA~g~~~sP~~~aDvvt~tTHKTlrG  243 (463)
T d2a7va1         164 DYNQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTLRG  243 (463)
T ss_dssp             CHHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSGGGCS
T ss_pred             cHHHHHHHHhhcCCceEEecccccccccCHHHHHHHhhcccceEEechhhhhHHhhhhhhcChhhhhhhhhchhhhhhcC
Confidence                  222   499999999999999999999999999999999999999999993            4444 3     


Q ss_pred             cCCchhhh-----------------hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHH
Q psy10669        173 KTGEKILY-----------------DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDE  235 (337)
Q Consensus       173 ~~Gg~i~~-----------------~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~  235 (337)
                      |+||+|++                 ++.++|++++||++||+||+|.|||++++++|+++++|++|++||++||++|++.
T Consensus       244 PrgGiIl~~~~~~~~~~~~~~~~~~~~~~~i~~avFPg~qggph~h~iAa~Ava~~ea~~~~fk~Ya~qVv~NAk~La~~  323 (463)
T d2a7va1         244 ARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADA  323 (463)
T ss_dssp             CSCEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCceEEEEcccccccccccCccchhHHHHHhhhhcCcccchhhhhhhHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHH
Confidence            47999986                 3678999999999999999999999999999999999999999999999999999


Q ss_pred             HHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCc-----------ccchhhhhHhhhCCCHHHHHHH
Q psy10669        236 MIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT-----------GISLAAEIQAISGPKLVDFQTC  304 (337)
Q Consensus       236 L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~-----------girig~~~~t~~G~~~~~~~~~  304 (337)
                      |.+.||+|++|+||||+++||+++.+++|..++++|+++||.+|+|+           ||||||+++|+|||+.+||.+.
T Consensus       324 L~~~G~~vv~ggTdnHlvlvdl~~~~~~G~~ae~~Le~~gI~~Nkn~iP~D~~~~~~sGiRiGT~a~TtrG~~e~dm~~i  403 (463)
T d2a7va1         324 LLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRV  403 (463)
T ss_dssp             HHHTTCEEGGGSCSSSEEEEECTTTTCCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHH
T ss_pred             HHhCCCeeecCCCCCceeeeeccccCCCHHHHHHHHHhccCccCCccCCCCCCCCCCCceEeCCHHHHhCCCCHHHHHHH
Confidence            99999999999999999999999999999999999999999999987           9999999999999998777542


Q ss_pred             ------Hh---------------------hCCCcHHHHHHHHHHHHHHHhcCCCCCCCC
Q psy10669        305 ------LH---------------------KNEDIVKKVAALKKEIEDYSNQFEMPGQAD  336 (337)
Q Consensus       305 ------~~---------------------~~~~~~~~~~~lr~~V~~~~~~fp~p~~~~  336 (337)
                            ++                     ++.++.+++.+||+||.+||++||+|+||+
T Consensus       404 A~~I~~~l~~~~~~~~~~~~~~df~~~~~~~~~~~~~i~~lr~~V~~l~~~fP~pg~d~  462 (463)
T d2a7va1         404 VDFIDEGVNIGLEVKSKTAKLQDFKSFLLKDSETSQRLANLRQRVEQFARAFPMPGFDE  462 (463)
T ss_dssp             HHHHHHHHHHHHHHHHHCCSHHHHHHHHHHCHHHHHHHHHHHHHHHHHHTTSCCSSCSC
T ss_pred             HHHHHHHHHHhhhhhhhhhhhHHHHHHHhcCcccHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence                  11                     233345678999999999999999999997

>d1rv3a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=8.4e-86  Score=646.31  Aligned_cols=336  Identities=51%  Similarity=0.830  Sum_probs=309.7

Q ss_pred             CcchhhhhhhhhhcHHHHHHHHHHHhhcccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHH
Q psy10669          2 SSSTMLHGTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVA   81 (337)
Q Consensus         2 ~~~~~~~~~l~~~d~~~~~~~~~e~~rq~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~   81 (337)
                      +...|+.++|++.||||+++|++|.+||+++|+|||||||+||.|+++++|+|+|||++|+||.|||+||+++|+||.+|
T Consensus         3 ~~~~~~~~~l~~~D~ei~~~i~~e~~rq~~~l~LIaSEN~~S~~v~~algS~l~nkYaeG~pg~Ryy~G~~~iD~iE~la   82 (470)
T d1rv3a_           3 SHEQMLAQPLKDSDAEVYDIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLC   82 (470)
T ss_dssp             THHHHTTSCHHHHCHHHHHHHHHHHHHHHSSEECCTTCCCCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHH
T ss_pred             chHHHHhhhHhhhCHHHHHHHHHHHHHHHcCceEecCCCcCCHHHHHHhcchhcccccCCCCCccccCCchhHHHHHHHH
Confidence            45678889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------------------
Q psy10669         82 QQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------------------  119 (337)
Q Consensus        82 ~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------------------  119 (337)
                      ++|++++||+++..|++||||+||++||++||.||++|                                          
T Consensus        83 ~~ra~~lF~~~~~~~~anVqp~SGs~An~av~~all~pgD~im~~~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~v~~  162 (470)
T d1rv3a_          83 QKRALQAYGLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNP  162 (470)
T ss_dssp             HHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCT
T ss_pred             HHHHHHHhCCChhhccccccccCCccHHHHHHHHhcCCCCeEeeeccccCCcccccccccCCCcccccceeEeeEEEEec
Confidence            99999999999888999999999999999999999876                                          


Q ss_pred             -----------ccc---cccEEEEcCcccccccChHHHHHHhhhcCCeEEEeccccccccce------------eee-ec
Q psy10669        120 -----------NNA---RFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIAG------------VKG-VT  172 (337)
Q Consensus       120 -----------~~a---~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~g------------~~~-T~  172 (337)
                                 +++   +||+||+|.|+|++++|++++++||+++|++||+|+||.+|||+|            +++ ||
T Consensus       163 ~~~~IDyd~l~~~a~~~kPklIi~G~S~y~r~~d~~~~reIad~vga~l~~D~aH~aGLIA~g~~~sPl~~aDvvt~tTH  242 (470)
T d1rv3a_         163 DTGYIDYDRLEENARLFHPKLIIAGTSCYSRNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFEHCHVVTTTTH  242 (470)
T ss_dssp             TTCSBCHHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGGTCSEEEEESS
T ss_pred             ccCcccHHHHHHHHHhhCcceEeechhhccccCCHHHHHHHHhccCCeEEecchhhhhhccccccCChhheeeeeeeehh
Confidence                       222   499999999999999999999999999999999999999999993            444 43


Q ss_pred             -----cCCchhhh-----------------hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHH
Q psy10669        173 -----KTGEKILY-----------------DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANAS  230 (337)
Q Consensus       173 -----~~Gg~i~~-----------------~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~  230 (337)
                           |+||+|++                 ++.++|++++||++||+||+|.|||+|++++|+++++|++|++||++||+
T Consensus       243 KtlrGPrgGiI~~~~~~~~~~~~~~~~~~~~~~~~i~~avFPg~qggph~~~IAa~Ava~~ea~~~~fk~Ya~qvv~NAk  322 (470)
T d1rv3a_         243 KTLRGCRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANCR  322 (470)
T ss_dssp             GGGCCCSCEEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHH
T ss_pred             hhccCCcceEEEEccccccccccccchhHHHHHHHHhhhcCccccccchhhHHHHHHHHHHHhcChHHHHHHHHHHHHHH
Confidence                 47999986                 28889999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCc-----------ccchhhhhHhhhCCCHH
Q psy10669        231 HLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT-----------GISLAAEIQAISGPKLV  299 (337)
Q Consensus       231 ~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~-----------girig~~~~t~~G~~~~  299 (337)
                      +|++.|.+.||+|++|+||||+++||+++.++++.++++.|+++||.+|+|+           ||||||+++|+|||+.+
T Consensus       323 ~La~~L~~~G~~v~~ggTdnHlvlvdl~~~g~~g~~ae~~Le~~gI~~Nkn~iP~D~~~~~~sGiRiGT~alTtrG~~e~  402 (470)
T d1rv3a_         323 ALSAALVELGYKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEK  402 (470)
T ss_dssp             HHHHHHHHTTCEEGGGSCSSSEEEEEGGGGTCCHHHHHHHHHHTTEECEEECCSSCSCTTSCCEEEEECHHHHHTTCCHH
T ss_pred             HHHHHHHhCCceeccCCCCCceEEEeecccCCcHHHHHHHHHHcCcEECCCcCCCCCCCCCCCeeEecCHHHHhCCCCHH
Confidence            9999999999999999999999999999999999999999999999999987           99999999999999987


Q ss_pred             HHHH------HHhh------------------------CCCcHHHHHHHHHHHHHHHhcCCCCCCCCC
Q psy10669        300 DFQT------CLHK------------------------NEDIVKKVAALKKEIEDYSNQFEMPGQADL  337 (337)
Q Consensus       300 ~~~~------~~~~------------------------~~~~~~~~~~lr~~V~~~~~~fp~p~~~~~  337 (337)
                      ||.+      ++++                        +..+.+.+.+||+||.+||++||+||+++.
T Consensus       403 dm~~iA~~I~~~l~~~~~~~~~~g~~~~~~ef~~~~~~~~~~~~~i~~lr~eV~~l~~~FPlPg~~~~  470 (470)
T d1rv3a_         403 DFQKVAHFIHRGIELTVQIQDDTGPRATLKEFKEKLAGDEKHQRAVRALRQEVESFAALFPLPGLPGF  470 (470)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHSCHHHHHHHHHHHHHHHHHHTTSCCCSSSCC
T ss_pred             HHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHhhcccccHHHHHHHHHHHHHHHHcCCCCCCCCC
Confidence            7654      2221                        112235688999999999999999999863

>d1dfoa_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.5e-83  Score=621.84  Aligned_cols=321  Identities=39%  Similarity=0.611  Sum_probs=301.2

Q ss_pred             hhhhhhcHHHHHHHHHHHhhcccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhh
Q psy10669          9 GTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKA   88 (337)
Q Consensus         9 ~~l~~~d~~~~~~~~~e~~rq~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~l   88 (337)
                      .+|+++||||+++|++|.+||+++|+|||||||+||.|+++++|+|+|||++|+||.|||+||+++|++|.+|+++++++
T Consensus         5 ~~l~~~D~ei~~~i~~e~~rq~~~i~LiaSEN~~S~~v~~a~~S~l~nkYaeG~pg~Ryy~G~~~iD~iE~la~~ra~~l   84 (416)
T d1dfoa_           5 MNIADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKEL   84 (416)
T ss_dssp             CCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHH
T ss_pred             CChhhcCHHHHHHHHHHHHHHHcCceEecCcccCCHHHHHHhcCcccCcccCCCCCCcccCCChhHHHHHHHHHHHHHHH
Confidence            35899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCcceeecCCCchhHHHHHHhhCCc-----------------------------------------------cc
Q psy10669         89 FNLDPEQWGCNVQPYSGSPANFAVCEKALPT-----------------------------------------------NN  121 (337)
Q Consensus        89 fg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~-----------------------------------------------~~  121 (337)
                      ||+++    +||||+||++||+++|.||++|                                               ++
T Consensus        85 F~a~~----anVqp~SGs~AN~av~~All~pGD~Il~l~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~IDyd~l~~~  160 (416)
T d1dfoa_          85 FGADY----ANVQPHSGSQANFAVYTALLEPGDTVLGMNLAHGGHLTHGSPVNFSGKLYNIVPYGIDATGHIDYADLEKQ  160 (416)
T ss_dssp             HTCSE----EECCCSSHHHHHHHHHHHHCCTTCEEEEECTTTTCCGGGTCTTSHHHHHSEEEEECBCSSSSBCHHHHHHH
T ss_pred             hCCCc----ceeecccCccHHHHHHHHhcCCCCeeeeccccccccccccccccccCceEEEEecccCCccCccHHHHHHH
Confidence            99987    8999999999999999999986                                               22


Q ss_pred             c---cccEEEEcCcccccccChHHHHHHhhhcCCeEEEeccccccccce------------eeee-c-----cCCchhhh
Q psy10669        122 A---RFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIAG------------VKGV-T-----KTGEKILY  180 (337)
Q Consensus       122 a---~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~g------------~~~T-~-----~~Gg~i~~  180 (337)
                      +   |||+||+|.|+|++++|++++++|||++|++||+|+||.+|||++            +++| |     |+||+|++
T Consensus       161 a~~~kPklIi~G~S~y~r~~d~~~~reiad~vga~l~~D~aH~~GLIa~g~~~sP~~~aDvvt~tThKtlrGPrggiI~~  240 (416)
T d1dfoa_         161 AKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLILA  240 (416)
T ss_dssp             HHHHCCSEEEEECSSCCSCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCCTTTSSEEEEESSSTTCCCSCEEEEE
T ss_pred             HHHhccceEEecccccccccCHHHHHHHHHhcCceEEcchhhhhcceeccccCCcccccceeeeehhhcccCCCceEEEe
Confidence            2   499999999999999999999999999999999999999999993            4444 3     46999996


Q ss_pred             -----hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEE
Q psy10669        181 -----DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILI  255 (337)
Q Consensus       181 -----~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V  255 (337)
                           ++.++|+.++||++||+||+|.|||++++++|+++++|++|++||++||++|++.|.+.||+|++|+||+|+++|
T Consensus       241 ~~~~~~~~~~i~~avfPg~qggp~~~~iaa~Aval~Ea~~~~fk~Y~~qvv~NA~~La~~L~~~G~~iv~ggTdnHlvlv  320 (416)
T d1dfoa_         241 KGGSEELYKKLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKTYQQQVAKNAKAMVEVFLERGYKVVSGGTDNHLFLV  320 (416)
T ss_dssp             SSCCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEE
T ss_pred             ccchHhHHHHHHhhhCcccccCccHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhCCcccccCCCCCceeEE
Confidence                 478899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecCCCcchHHHHHHHhhcCceeccCc------------ccchhhhhHhhhCCCHHHHHH------HHhhCCCcHHHHHH
Q psy10669        256 DLRKNKLTGSKVELVLEEIAIACNKNT------------GISLAAEIQAISGPKLVDFQT------CLHKNEDIVKKVAA  317 (337)
Q Consensus       256 ~~~~~~~~~~~~~~~L~~~gI~v~~~~------------girig~~~~t~~G~~~~~~~~------~~~~~~~~~~~~~~  317 (337)
                      |+++.+++|.++++.|+++||.||+|+            ||||||+++|+|||+++||.+      +++++.++++.+.+
T Consensus       321 dl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~d~~~~~~~SGiRiGT~a~TtrG~~e~d~~~iA~~I~~~l~~~~~~~~~~~  400 (416)
T d1dfoa_         321 DLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRVGTPAITRRGFKEAEAKELAGWMCDVLDSINDEAVIER  400 (416)
T ss_dssp             ECGGGTCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHTTTCHHHHHH
T ss_pred             EecccCCCHHHHHHHHHHcCeEEeCCcCCCCCCCCCCCCceEeCCHHHHhCCCCHHHHHHHHHHHHHHHHcCCcHHHHHH
Confidence            999999999999999999999999988            999999999999999877764      46677677788999


Q ss_pred             HHHHHHHHHhcCCCCC
Q psy10669        318 LKKEIEDYSNQFEMPG  333 (337)
Q Consensus       318 lr~~V~~~~~~fp~p~  333 (337)
                      +|+||.+||++||+|.
T Consensus       401 ir~~V~~l~~~fPly~  416 (416)
T d1dfoa_         401 IKGKVLDICARYPVYA  416 (416)
T ss_dssp             HHHHHHHHHHHSCSBC
T ss_pred             HHHHHHHHHHcCCCCC
Confidence            9999999999999973

>d1kl1a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=100.00  E-value=9e-82  Score=606.93  Aligned_cols=315  Identities=40%  Similarity=0.684  Sum_probs=296.1

Q ss_pred             hhhhhhcHHHHHHHHHHHhhcccceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhh
Q psy10669          9 GTLAQTDPELYSLIKKEKHRQINGIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKA   88 (337)
Q Consensus         9 ~~l~~~d~~~~~~~~~e~~rq~~~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~l   88 (337)
                      +.|++.||||+++|++|.+||+++|+|||||||+||.|+++++|+|+|||++|+||.|||+||+++|+||.+|++|++++
T Consensus         2 ~~l~~~D~ei~~~i~~e~~rq~~~l~LiaSEN~~S~~v~~a~~S~l~nkyaeG~pg~ryy~G~~~id~iE~la~~ra~~l   81 (405)
T d1kl1a_           2 KYLPQQDPQVFAAIEQERKRQHAKIELIASENFVSRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQL   81 (405)
T ss_dssp             CHHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHH
T ss_pred             chhhhhCHHHHHHHHHHHHHHHcCceEeccCCcCCHHHHHHhcCcccCcCcCCCCCccccCCchhHHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------------------------c
Q psy10669         89 FNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------------------------N  120 (337)
Q Consensus        89 fg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------------------------~  120 (337)
                      ||+++    +|||++||++||++||.||++|                                                +
T Consensus        82 F~a~~----anVqp~SGs~An~av~~all~pGD~im~l~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~l~~  157 (405)
T d1kl1a_          82 FGAEH----ANVQPHSGAQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYDDVRE  157 (405)
T ss_dssp             HCCSE----EECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECBCTTTCSBCHHHHHH
T ss_pred             hCCCc----ceeeccCchHHHHHHHHHhcCCCCEEEEeecccccccccCccccccceEEEEEEeccchhcccccHHHHHH
Confidence            99987    8999999999999999999886                                                2


Q ss_pred             cc---cccEEEEcCcccccccChHHHHHHhhhcCCeEEEeccccccccce------------eee-ec-----cCCchhh
Q psy10669        121 NA---RFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIAG------------VKG-VT-----KTGEKIL  179 (337)
Q Consensus       121 ~a---~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~g------------~~~-T~-----~~Gg~i~  179 (337)
                      ++   |||+||+|.|+|++++|+++|++|||++|++||+|+||.+|||++            +++ ||     |+||+|+
T Consensus       158 ~a~~~kPklIi~G~S~y~r~~d~~~~reIad~vga~l~~D~aH~~GLIa~g~~~~P~~~aDvvt~tThKtlrGPrgg~I~  237 (405)
T d1kl1a_         158 KARLHRPKLIVAAASAYPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPRGGMIL  237 (405)
T ss_dssp             HHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTCSEEEEESSSTTCCCSCEEEE
T ss_pred             HHHhhCcceEEecccccccccChHHHHHHHhhhCCEEecchhhHhhhhhhhhcCChhhhhhheeccccccccCCCCceEE
Confidence            22   499999999999999999999999999999999999999999993            444 43     4699999


Q ss_pred             h--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEe
Q psy10669        180 Y--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDL  257 (337)
Q Consensus       180 ~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~  257 (337)
                      +  ++.++|++++||++||+||+|.|||++++++|+++++|++|++|+++||++|++.|.+.||+|++|+||+|+++||+
T Consensus       238 ~~~~~~~~i~~avfPg~qggp~~~~iAa~Aval~Ea~~~~fk~Ya~qvv~NAkaLa~~L~~~G~~vv~ggTd~H~vlvdl  317 (405)
T d1kl1a_         238 CQEQFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNEGFTLVSGGTDNHLLLVDL  317 (405)
T ss_dssp             ECHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEEC
T ss_pred             ecchhHHHHHhhhCcccccCcchhHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcCCceeecCCCccceeeccc
Confidence            8  68999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCcchHHHHHHHhhcCceeccCc------------ccchhhhhHhhhCCCHHHHHH------HHhhCCCcHHHHHHHH
Q psy10669        258 RKNKLTGSKVELVLEEIAIACNKNT------------GISLAAEIQAISGPKLVDFQT------CLHKNEDIVKKVAALK  319 (337)
Q Consensus       258 ~~~~~~~~~~~~~L~~~gI~v~~~~------------girig~~~~t~~G~~~~~~~~------~~~~~~~~~~~~~~lr  319 (337)
                      ++.++++.++++.|+++||.+|+|+            ||||||+++|+|||+++||.+      +++++.++.+.+.++|
T Consensus       318 ~~~~~~g~~ae~~Le~agI~~Nkn~iP~d~~~~~~~SGiRiGT~a~TtrG~~e~dm~~ia~~I~~~l~~~~~~~~~~~ir  397 (405)
T d1kl1a_         318 RPQQLTGKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLKNVGSEQALEEAR  397 (405)
T ss_dssp             GGGTCCHHHHHHHHHHHTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHTCTTCHHHHHHHH
T ss_pred             cccCCcHHHHHHHHHHcCeEEcCCcCCCCCCCCCCCCceeecCHHHHhCCCCHHHHHHHHHHHHHHHhcCCcHHHHHHHH
Confidence            9999999999999999999999986            999999999999999777654      4667767778899999


Q ss_pred             HHHHHHHh
Q psy10669        320 KEIEDYSN  327 (337)
Q Consensus       320 ~~V~~~~~  327 (337)
                      +||.+||.
T Consensus       398 ~~V~~L~~  405 (405)
T d1kl1a_         398 QRVAALTD  405 (405)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHhhC
Confidence            99999983

>d2bwna1 c.67.1.4 (A:2-397) 5-aminolevulinate synthase {Rhodobacter capsulatus [TaxId: 1061]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 5-aminolevulinate synthase
species: Rhodobacter capsulatus [TaxId: 1061]

Probab=99.97  E-value=3.3e-31  Score=256.66  Aligned_cols=238  Identities=16%  Similarity=0.146  Sum_probs=192.0

Q ss_pred             cceeeeccCCCC----CHHHHHHHhhhhhhccCCCCCCCcCcCccchH-HHHHHHHHHHHHhhcCCCCCCCcceeecCCC
Q psy10669         31 NGIELIASENFT----SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFI-DEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG  105 (337)
Q Consensus        31 ~~i~l~asen~~----~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~-~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg  105 (337)
                      +.+..++||||+    +|.|+++.... ..+|+.|+.|+|.+.|+..+ .++|    +++++|||.+.     ++.|+||
T Consensus        45 ~~~~~FsSndYLGL~~~p~v~~a~~~a-l~~yG~gs~~Sr~~~G~~~~h~~LE----~~lA~~~g~e~-----all~~sG  114 (396)
T d2bwna1          45 QDITVWCGNDYLGMGQHPVVLAAMHEA-LEAVGAGSGGTRNISGTTAYHRRLE----AEIAGLHQKEA-----ALVFSSA  114 (396)
T ss_dssp             EEEEECSCSCTTSGGGCHHHHHHHHHH-HHHHCSCCCSBTTTBCCBHHHHHHH----HHHHHHTTCSE-----EEEESCH
T ss_pred             eEEEEEEcccccCcCCCHHHHHHHHHH-HHHhCCCccccccccCCchHHHHHH----HHHHHHhCCCc-----eeeeecc
Confidence            467789999999    99999999876 56899999999999999665 6899    58899999985     7999999


Q ss_pred             chhHHHHHHhhC--Cc-------------------------------------cc---cc--ccEEEEcCcccccccChH
Q psy10669        106 SPANFAVCEKAL--PT-------------------------------------NN---AR--FDFLSSGTTCYSRCLDYA  141 (337)
Q Consensus       106 t~AN~~v~~aLl--~~-------------------------------------~~---a~--pklII~~~S~~~~~~d~~  141 (337)
                      |.||++++.+|.  .+                                     ++   .+  .+.+|+.+++|||++|++
T Consensus       115 ~~An~~~i~~l~~~~~~d~i~~D~~~Hasi~~g~~ls~a~~~~f~Hnd~~~l~~l~~~~~~~~~~~iv~egvySmdGd~a  194 (396)
T d2bwna1         115 YNANDATLSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIFRHNDVAHLRELIAADDPAAPKLIAFESVYSMDGDFG  194 (396)
T ss_dssp             HHHHHHHHHHHHHHSTTCEEEEETTCCHHHHHHHHHSCCCEEEECTTCHHHHHHHHHHSCTTSCEEEEEESBCTTTCCBC
T ss_pred             hHHHHHHHHHHhcccCCCceeehhhhhhccchhhhccccCceEeecchHHHhhhHHhhhcccCceeEEEEeeccCccccc
Confidence            999999999883  22                                     01   11  234444569999999887


Q ss_pred             HHH---HHhhhcCCeEEEeccccccccc----e-------------eeeecc-----CCchhhh--hHHHHHhhccCCCC
Q psy10669        142 RFR---QICDETDSIMFADMSHISGLIA----G-------------VKGVTK-----TGEKILY--DYEEKINNAVFPSL  194 (337)
Q Consensus       142 ~l~---eia~~~ga~l~vD~AH~~Gli~----g-------------~~~T~~-----~Gg~i~~--~l~~~i~~~~~p~~  194 (337)
                      +|.   +||++||++|+||+||+.|++|    |             +++|..     .||++++  ++.+.+.....|++
T Consensus       195 pl~~l~~L~~~y~~~L~vDeAHs~Gv~G~~G~G~~~~~~~~~~~di~~gTlsKa~g~~Gg~v~~~~~~i~~l~~~~~~~i  274 (396)
T d2bwna1         195 PIKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFGGYIAASARMVDAVRSYAPGFI  274 (396)
T ss_dssp             CHHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSCCEEEEECHHHHHHHHHHCHHHH
T ss_pred             ccHhHHHHhhhhcceeeeccceeeeeeccccccchhhcCCceeeeeeeecccccccccccccchhHHHHHHHHhhcchhh
Confidence            655   6889999999999999999998    1             355652     4899887  57777776667888


Q ss_pred             CCCCcHHHHHHHHHHHHHHh-chhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHH-Hh
Q psy10669        195 QGGPHNHAIGAIATAMLQAQ-SDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELV-LE  272 (337)
Q Consensus       195 ~g~~~~~~iaala~a~~e~~-~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~-L~  272 (337)
                      ++++.+|.+++.+.+..++. ..+.++.+++++.|++++.+.|.+.|+++..  +++||++|.+++.. ....+++. |+
T Consensus       275 fStalpp~~~aa~~~al~i~~~~~~~~~r~~l~~~~~~~~~~l~~~g~~~~~--~~spIvpv~ig~~~-~~~~~a~~lL~  351 (396)
T d2bwna1         275 FSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKALGMPIID--HGSHIVPVVIGDPV-HTKAVSDMLLS  351 (396)
T ss_dssp             TSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHTCCBCC--CSSSCEEEECCCHH-HHHHHHHHHHH
T ss_pred             hcccCcHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhcCCCcCC--CCCCEEEEEeCCHH-HHHHHHHHHHH
Confidence            88888888888777766665 3566778999999999999999999999865  89999999998755 44555554 66


Q ss_pred             hcCceeccC
Q psy10669        273 EIAIACNKN  281 (337)
Q Consensus       273 ~~gI~v~~~  281 (337)
                      +.||+|...
T Consensus       352 e~Gi~v~~i  360 (396)
T d2bwna1         352 DYGVYVQPI  360 (396)
T ss_dssp             HHCEECCEE
T ss_pred             hCCEEEEEE
Confidence            789998753

>d1bs0a_ c.67.1.4 (A:) PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS)
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=2.5e-27  Score=228.24  Aligned_cols=236  Identities=14%  Similarity=0.124  Sum_probs=186.0

Q ss_pred             ceeeeccCCCC----CHHHHHHHhhhhhhccCCCCCCCcCcCccchH-HHHHHHHHHHHHhhcCCCCCCCcceeecCCCc
Q psy10669         32 GIELIASENFT----SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFI-DEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGS  106 (337)
Q Consensus        32 ~i~l~asen~~----~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~-~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt  106 (337)
                      .+..++|+||+    +|.|+++.... ..+|+.|++|+|.+.|+..+ .++|    +++++|+|.+.     .+.++||+
T Consensus        39 ~~l~f~s~dYLGl~~~p~v~~a~~~a-~~~~G~~~~~sr~~~g~~~~~~~lE----~~LA~~~g~e~-----al~~~SG~  108 (383)
T d1bs0a_          39 QYLNFSSNDYLGLSHHPQIIRAWQQG-AEQFGIGSGGSGHVSGYSVVHQALE----EELAEWLGYSR-----ALLFISGF  108 (383)
T ss_dssp             EEEECSCCCTTSGGGCHHHHHHHHHH-HHHHCSCCCSBTTTTCCCHHHHHHH----HHHHHHHTCSE-----EEEESCHH
T ss_pred             EEEEEEcccccccCCCHHHHHHHHHH-HHHhCCCCCccccccCcchHHHHHH----HHHHHhcCCCc-----eEEecccc
Confidence            35679999999    99999999865 66899999999999999666 7899    58899999985     79999999


Q ss_pred             hhHHHHHHhhCCc--------------------------------------ccc--c-ccEEEEcCcccccccChHH---
Q psy10669        107 PANFAVCEKALPT--------------------------------------NNA--R-FDFLSSGTTCYSRCLDYAR---  142 (337)
Q Consensus       107 ~AN~~v~~aLl~~--------------------------------------~~a--~-pklII~~~S~~~~~~d~~~---  142 (337)
                      .||++++.++.++                                      .+.  + .+.+|+.++.|+|++|+.+   
T Consensus       109 ~an~~~i~al~~~~d~v~~d~~~h~si~~g~~~~~~~~~~~~hnd~~~le~~l~~~~~~~~~vv~e~v~s~~G~i~pl~~  188 (383)
T d1bs0a_         109 AANQAVIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAHNDVTHLARLLASPCPGQQMVVTEGVFSMDGDSAPLAE  188 (383)
T ss_dssp             HHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTSSSEEEEECTTCHHHHHHHHHSCCSSCEEEEEESBCTTTCCBCCHHH
T ss_pred             hhhHHHHHhhcCCCceEEeeccccHHHhhccccCCCcceEecchHHHHHHHHhcccCCCceEEEecCCCCCCCcccchhH
Confidence            9999999999765                                      111  1 2445555689999887665   


Q ss_pred             HHHHhhhcCCeEEEeccccccccc----e-----------eeeec-c----CCchhhh--hHHHHHhhccCCCCCCCCcH
Q psy10669        143 FRQICDETDSIMFADMSHISGLIA----G-----------VKGVT-K----TGEKILY--DYEEKINNAVFPSLQGGPHN  200 (337)
Q Consensus       143 l~eia~~~ga~l~vD~AH~~Gli~----g-----------~~~T~-~----~Gg~i~~--~l~~~i~~~~~p~~~g~~~~  200 (337)
                      |.+||++||++|+||+||+.|+++    |           +..|. |    .||++.+  ++.+.+.....|.+++++.+
T Consensus       189 l~~l~~~~~~~livDeah~~gv~G~~g~G~~~~~~~~~~~~~~t~~ka~g~~Gg~v~~~~~~~~~l~~~~~~~~~s~~~~  268 (383)
T d1bs0a_         189 IQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGFGVSGAAVLCSSTVADYLLQFARHLIYSTSMP  268 (383)
T ss_dssp             HHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTCCCSEEEEESSSTTSSCCEEEEECHHHHHHHHHHCHHHHSSBCCC
T ss_pred             HHHHHHhcCcEEEeecceeeeecCCcccchHHHcCCccccccccccccccccccccccchhHHHHHHhhchhhhhccccc
Confidence            557899999999999999999998    1           22333 2    3777776  56777766556666776666


Q ss_pred             HHHHHHHHHHHHH-hchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceec
Q psy10669        201 HAIGAIATAMLQA-QSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACN  279 (337)
Q Consensus       201 ~~iaala~a~~e~-~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~  279 (337)
                      |..++.+.+..++ .....+..++++.+|.+++.+.|.+.|+++..  +++||++|.+++.. .+.++.+.|.+.||+|+
T Consensus       269 p~~~aa~~~a~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~g~~~~~--~~s~Ii~v~~g~~~-~a~~~~~~L~~~Gi~v~  345 (383)
T d1bs0a_         269 PAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLPFTLAD--SCSAIQPLIVGDNS-RALQLAEKLRQQGCWVT  345 (383)
T ss_dssp             HHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTSSCEECS--CCSSBCCEEEESHH-HHHHHHHHHHHTTEECC
T ss_pred             chHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhcCCccCC--CCCCEEEEEECCHH-HHHHHHHHHHHCCceEE
Confidence            6665555444444 34566788999999999999999999999865  88999999988655 56788889998999987


Q ss_pred             c
Q psy10669        280 K  280 (337)
Q Consensus       280 ~  280 (337)
                      .
T Consensus       346 ~  346 (383)
T d1bs0a_         346 A  346 (383)
T ss_dssp             E
T ss_pred             E
Confidence            4

>d1fc4a_ c.67.1.4 (A:) 2-amino-3-ketobutyrate CoA ligase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 2-amino-3-ketobutyrate CoA ligase
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=5.3e-27  Score=227.34  Aligned_cols=236  Identities=19%  Similarity=0.210  Sum_probs=185.9

Q ss_pred             cceeeeccCCCC----CHHHHHHHhhhhhhccCCCCCCCcCcCccchH-HHHHHHHHHHHHhhcCCCCCCCcceeecCCC
Q psy10669         31 NGIELIASENFT----SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFI-DEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG  105 (337)
Q Consensus        31 ~~i~l~asen~~----~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~-~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg  105 (337)
                      +.+..++|+||+    +|.|+++.... ..+|+.|+.++|.+.|+... .++|    ++++++||.+.     .+.++||
T Consensus        45 ~~~l~f~s~dYLGl~~hp~v~~a~~~a-~~~~g~~~~~sr~~~g~~~~~~~lE----~~lA~~~g~e~-----al~~~SG  114 (401)
T d1fc4a_          45 SHVINFCANNYLGLANHPDLIAAAKAG-MDSHGFGMASVRFICGTQDSHKELE----QKLAAFLGMED-----AILYSSC  114 (401)
T ss_dssp             CEEEECCCSCTTSCTTCHHHHHHHHHH-HHHHCSCCCSCHHHHCCBHHHHHHH----HHHHHHHTCSE-----EEEESCH
T ss_pred             CEEEEEEccccccccCCHHHHHHHHHH-HHHhCCCcccceeeccCcHHHHHHH----HHHHHhhcCCc-----eEEecch
Confidence            446678999998    89999999876 56899999999999999666 6788    47789999985     7999999


Q ss_pred             chhHHHHHHhhCCc-------------------------------------cc---c--c--ccEEEEcCcccccccCh-
Q psy10669        106 SPANFAVCEKALPT-------------------------------------NN---A--R--FDFLSSGTTCYSRCLDY-  140 (337)
Q Consensus       106 t~AN~~v~~aLl~~-------------------------------------~~---a--~--pklII~~~S~~~~~~d~-  140 (337)
                      +.||++++.++.++                                     .+   .  .  ...+|+.+++|||++|+ 
T Consensus       115 ~~An~~~i~~l~~~~d~i~~d~~~h~s~~~G~~~~~a~~~~~~~~d~~~le~~~~~~~~~~~~~~liv~egv~s~~G~~~  194 (401)
T d1fc4a_         115 FDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYANNDMQELEARLKEAREAGARHVLIATDGVFSMDGVIA  194 (401)
T ss_dssp             HHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHTSCSEEEEECTTCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEEC
T ss_pred             hhhhHHHHHHhcCCCcEEEeCCcchHHHHccccccCceEEEEcCCChHHHHHHHHHhhhcccCceEEEEcCCCCCCCchh
Confidence            99999999999765                                     00   0  1  23444556899998876 


Q ss_pred             --HHHHHHhhhcCCeEEEeccccccccc----e-------------eeeec-c-----CCchhhh--hHHHHHhhccCCC
Q psy10669        141 --ARFRQICDETDSIMFADMSHISGLIA----G-------------VKGVT-K-----TGEKILY--DYEEKINNAVFPS  193 (337)
Q Consensus       141 --~~l~eia~~~ga~l~vD~AH~~Gli~----g-------------~~~T~-~-----~Gg~i~~--~l~~~i~~~~~p~  193 (337)
                        +++++||++||++|++|+||+.|+++    |             +++|. |     .||++.+  ++.+.+.....|.
T Consensus       195 ~L~~l~~L~~~~~a~LivDeah~~g~~g~~G~G~~~~~~~~~~~dii~~tl~Ka~gg~~Gg~v~g~~~~~~~l~~~~~~~  274 (401)
T d1fc4a_         195 NLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKALGGASGGYTAARKEVVEWLRQRSRPY  274 (401)
T ss_dssp             CHHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSSSCEEEEECHHHHHHHHHHCHHH
T ss_pred             hhhHHHHHHhhcCcEEEehhhhccccccCCCCccchhccCCCCCeEEEeecccccccCCcccccCCHHHHHHHHcCChhh
Confidence              56678999999999999999999998    1             24454 2     3677765  5777776555566


Q ss_pred             CCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhh
Q psy10669        194 LQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEE  273 (337)
Q Consensus       194 ~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~  273 (337)
                      +++++.+|..++.+.+..+.. ...++.++++.+|.++|.+.+.+.|+++.+  +++++++|.+++.. ...++.+.|.+
T Consensus       275 ~~s~~l~p~~~~aa~~~l~~~-~~~~~~~~~l~~~~~~~~~~l~~~g~~~~~--~~~pIv~v~~~~~~-~a~~~~~~L~~  350 (401)
T d1fc4a_         275 LFSNSLAPAIVAASIKVLEMV-EAGSELRDRLWANARQFREQMSAAGFTLAG--ADHAIIPVMLGDAV-VAQKFARELQK  350 (401)
T ss_dssp             HHSCCCCHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHHHHHTTCCBCC--SSSSEEEEEEECHH-HHHHHHHHHHH
T ss_pred             hhcCCCCHHHHHHHHhhhccc-ccCHHHHHHHHHHHHHHHhhhcccCCccCC--CCCCEEEEEECCHH-HHHHHHHHHHH
Confidence            666666666665555555544 457899999999999999999999998865  88999999998755 56678888988


Q ss_pred             cCceecc
Q psy10669        274 IAIACNK  280 (337)
Q Consensus       274 ~gI~v~~  280 (337)
                      .||+++.
T Consensus       351 ~Gi~v~~  357 (401)
T d1fc4a_         351 EGIYVTG  357 (401)
T ss_dssp             TTEECCE
T ss_pred             CCceEEe
Confidence            9999875

>d1t3ia_ c.67.1.3 (A:) Probable cysteine desulfurase SufS {Synechocystis sp. PCC 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Probable cysteine desulfurase SufS
species: Synechocystis sp. PCC 6803 [TaxId: 1148]

Probab=99.71  E-value=7.3e-16  Score=147.97  Aligned_cols=240  Identities=12%  Similarity=-0.012  Sum_probs=164.9

Q ss_pred             eccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCc-hhHHHHHH
Q psy10669         36 IASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGS-PANFAVCE  114 (337)
Q Consensus        36 ~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt-~AN~~v~~  114 (337)
                      -++-..+|+.|++++...+.+.|  |+++++.+.-.....++-+.+|+.++++||++.+   ..+.+++++ .++..+..
T Consensus        28 ~a~~~~~p~~v~~~~~~~~~~~~--~n~~s~~~~~~~~~~~~~e~aR~~ia~llga~~~---~~i~~~~~tt~~~n~~~~  102 (408)
T d1t3ia_          28 NAATSQKPRAVLEKLMHYYENDN--ANVHRGAHQLSVRATDAYEAVRNKVAKFINARSP---REIVYTRNATEAINLVAY  102 (408)
T ss_dssp             TTTCCCCCHHHHHHHHHHHHHTC--CCC--CCSHHHHHHHHHHHHHHHHHHHHTTCSCG---GGEEEESSHHHHHHHHHH
T ss_pred             CccccCCCHHHHHHHHHHHHhcC--CCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCc---ccEEeecchHHHHHHHHh
Confidence            45666779999999988777654  6777665544444444444688999999999864   247777774 56544444


Q ss_pred             hh----CCc---------------------------------------------c-c--ccccEEEEcCcc--cccccCh
Q psy10669        115 KA----LPT---------------------------------------------N-N--ARFDFLSSGTTC--YSRCLDY  140 (337)
Q Consensus       115 aL----l~~---------------------------------------------~-~--a~pklII~~~S~--~~~~~d~  140 (337)
                      ++    +++                                             + .  .++++|++.+.+  .+...|+
T Consensus       103 ~~~~~~~~~g~~il~s~~e~~s~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~l~~~~~~~t~lv~i~~~~~~tG~~~p~  182 (408)
T d1t3ia_         103 SWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDEQESFDLEHFKTLLSEKTKLVTVVHISNTLGCVNPA  182 (408)
T ss_dssp             HTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBCTTSSBCHHHHHHHCCTTEEEEEEESBCTTTCBBCCH
T ss_pred             hccccccCCCCEEEeecccchhhhhhhhhhhhccCceEeeeeccccccccHHHhhhccCCCceEEEEecccccccccCcH
Confidence            42    211                                             0 0  126888887544  4799999


Q ss_pred             HHHHHHhhhcCCeEEEeccccccccc---------eee-eec----cCC-chhhh--hHHHHHhhccCC-----------
Q psy10669        141 ARFRQICDETDSIMFADMSHISGLIA---------GVK-GVT----KTG-EKILY--DYEEKINNAVFP-----------  192 (337)
Q Consensus       141 ~~l~eia~~~ga~l~vD~AH~~Gli~---------g~~-~T~----~~G-g~i~~--~l~~~i~~~~~p-----------  192 (337)
                      ++|.++|+++|++++||++|++|.+.         .++ +++    |+| |++..  ++.....+....           
T Consensus       183 ~~i~~~~~~~g~~~ivDa~q~~g~~~id~~~~~~D~~~~s~hK~~gp~G~g~l~v~~~~~~~~~p~~~g~~~~~~~~~~~  262 (408)
T d1t3ia_         183 EEIAQLAHQAGAKVLVDACQSAPHYPLDVQLIDCDWLVASGHKMCAPTGIGFLYGKEEILEAMPPFFGGGEMIAEVFFDH  262 (408)
T ss_dssp             HHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEEGGGTTSCTTCEEEEECHHHHHHSCCCSCSTTSEEEECSSC
T ss_pred             HHHhhhhhccCceeeeccceecccccccccccCCceEEeccccccCCCCccccccchhhhhcCCceecCCcccccccccc
Confidence            99999999999999999999999998         233 333    344 44432  343333221110           


Q ss_pred             ---------CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCC--CCCeEEEEEecCC
Q psy10669        193 ---------SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGG--TDVHLILIDLRKN  260 (337)
Q Consensus       193 ---------~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~--t~~h~v~V~~~~~  260 (337)
                               .-.||++.+.++++..++..+.+...+...++..++.+++.+.+.+. ++.+.+..  ...+..+|.+...
T Consensus       263 ~~~~~~~~r~e~Gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~iv~f~~~  342 (408)
T d1t3ia_         263 FTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYLWQGLGQIPQLRLYGPNPKHGDRAALASFNVA  342 (408)
T ss_dssp             EEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTCTTEEEESCCGGGSCBCSEEEEEET
T ss_pred             cccCCchhhhcCCcHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHhHHhhhhccCccccccCCCccccCcceEEEEEeC
Confidence                     12689999999999999988876566777788888999998888885 66666522  1233344555556


Q ss_pred             CcchHHHHHHHhhcCceecc
Q psy10669        261 KLTGSKVELVLEEIAIACNK  280 (337)
Q Consensus       261 ~~~~~~~~~~L~~~gI~v~~  280 (337)
                      ++++.++...|++.||.++.
T Consensus       343 ~~~~~~v~~~L~~~gI~v~~  362 (408)
T d1t3ia_         343 GLHASDVATMVDQDGIAIRS  362 (408)
T ss_dssp             TBCHHHHHHHHHTTTEECBC
T ss_pred             CCCHHHHHHHHhhCCcEEec
Confidence            77899999999999998863

>d1m6sa_ c.67.1.1 (A:) Low-specificity threonine aldolase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.68  E-value=4.2e-16  Score=142.14  Aligned_cols=233  Identities=16%  Similarity=0.172  Sum_probs=146.4

Q ss_pred             eeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHH
Q psy10669         35 LIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV  112 (337)
Q Consensus        35 l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v  112 (337)
                      -+.|.|.+  ||+|++|+...        +.|...|+....+.++|    ++++++||.++     .+.++|||.||+++
T Consensus         3 ~~~~~~~t~p~p~v~~A~~~a--------~~g~~~yg~~p~~~~le----~~lA~~~G~~~-----~~~~~sGt~A~~~a   65 (343)
T d1m6sa_           3 DLRSDTVTKPTEEMRKAMAQA--------EVGDDVYGEDPTINELE----RLAAETFGKEA-----ALFVPSGTMGNQVS   65 (343)
T ss_dssp             ECSCGGGCCCCHHHHHHHHTC--------CCCCGGGTCCHHHHHHH----HHHHHHTTCSE-----EEEESCHHHHHHHH
T ss_pred             ccccccCCCCCHHHHHHHHhh--------hcCCcccCCCHHHHHHH----HHHHHHHCCCe-----EEEeCCHHHHHHHH
Confidence            45677764  89999998642        23455677777888998    58899999885     68888999999999


Q ss_pred             HHhhCCc---------------------------------------------cc-----c--cccEEEEcCccc---ccc
Q psy10669        113 CEKALPT---------------------------------------------NN-----A--RFDFLSSGTTCY---SRC  137 (337)
Q Consensus       113 ~~aLl~~---------------------------------------------~~-----a--~pklII~~~S~~---~~~  137 (337)
                      +.++.++                                             .+     +  ++.++++....+   +..
T Consensus        66 l~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (343)
T d1m6sa_          66 IMAHTQRGDEVILEADSHIFWYEVGAMAVLSGVMPHPVPGKNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRV  145 (343)
T ss_dssp             HHHHCCTTCEEEEETTCHHHHSSTTHHHHHTCCEEEEECEETTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBC
T ss_pred             HHHHhccCCceeccccccceeeecccccccccceeeccccccCccCHHHHHHhhhhhhcccccccccccccccccCCcee
Confidence            9999764                                             00     0  133444443332   233


Q ss_pred             cChH---HHHHHhhhcCCeEEEeccccccccce--------------ee-eeccC-Cchh----hh--hHHHHHhhccCC
Q psy10669        138 LDYA---RFRQICDETDSIMFADMSHISGLIAG--------------VK-GVTKT-GEKI----LY--DYEEKINNAVFP  192 (337)
Q Consensus       138 ~d~~---~l~eia~~~ga~l~vD~AH~~Gli~g--------------~~-~T~~~-Gg~i----~~--~l~~~i~~~~~p  192 (337)
                      .|++   +|.++|+++|+++++|++|..+..+.              .+ ++++. ||..    ..  ++..........
T Consensus       146 ~~~~~l~~i~~~~~~~g~~~~~D~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  225 (343)
T d1m6sa_         146 VPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYADSVMFCLSKGLCAPVGSVVVGDRDFIERARKARKM  225 (343)
T ss_dssp             CCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHTCSEEEEESSSTTCCSSCEEEEECHHHHHHHHHHHHH
T ss_pred             cCHHHHHHHHHHHHhcCeEEEeccccccccccccccchhhhccccccccccccccccccccccccccHHHHhhhHhhCcc
Confidence            3444   56677799999999999998766551              11 22221 2222    22  332222211000


Q ss_pred             CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHh
Q psy10669        193 SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLE  272 (337)
Q Consensus       193 ~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~  272 (337)
                      ...+.+.....++......    ....++.++..++.+.+.+.+.+.+......+.+++++++++...+.++.++.+.|.
T Consensus       226 ~~~~~~~~~~~~a~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~l~~~L~  301 (343)
T d1m6sa_         226 LGGGMRQAGVLAAAGIIAL----TKMVDRLKEDHENARFLALKLKEIGYSVNPEDVKTNMVILRTDNLKVNAHGFIEALR  301 (343)
T ss_dssp             HTCCCSSTHHHHHHHHHHH----HHSSTTHHHHHHHHHHHHHHHHHHTCBCCGGGCCSSEEEEECTTSSSCHHHHHHHHH
T ss_pred             cccccchhHHHHHhhhhhh----hhhHHHHHHHHHHHHHhhhHHHHhccCccCCCCCceEEEEEeCCCcccHHHHHHHHH
Confidence            1112222222222222221    123345667778888888888886555544457889999999888888899999999


Q ss_pred             hcCceeccCc--ccchhh
Q psy10669        273 EIAIACNKNT--GISLAA  288 (337)
Q Consensus       273 ~~gI~v~~~~--girig~  288 (337)
                      +.||.+++-.  .+||.+
T Consensus       302 ~~Gi~v~~~~~~~iRi~~  319 (343)
T d1m6sa_         302 NSGVLANAVSDTEIRLVT  319 (343)
T ss_dssp             HHTEECEEEETTEEEEEC
T ss_pred             HCCCEEecCCCCEEEEEC
Confidence            9999988533  788754

>d1jf9a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Escherichia coli [TaxId: 562]

Probab=99.66  E-value=2.7e-15  Score=143.81  Aligned_cols=237  Identities=11%  Similarity=0.005  Sum_probs=162.7

Q ss_pred             eccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHH
Q psy10669         36 IASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCE  114 (337)
Q Consensus        36 ~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~  114 (337)
                      -|+-..+|+.|.+++...+.+.|  ++|+++.+.-.....++-+.+|+.+++++|+..+   ..+.|+++ |.++..++.
T Consensus        28 ~a~~~~~p~~v~~~~~~~~~~~~--~n~~~~~~~~~~~~~~~~e~~R~~ia~~l~~~~~---~~i~~~~~~T~~~~~~~~  102 (405)
T d1jf9a_          28 SAASAQKPSQVIDAEAEFYRHGY--AAVHRGIHTLSAQATEKMENVRKRASLFINARSA---EELVFVRGTTEGINLVAN  102 (405)
T ss_dssp             TTTCCCCCHHHHHHHHHHHHHTC--CCCSSCSSHHHHHHHHHHHHHHHHHHHHTTCSCG---GGEEEESSHHHHHHHHHH
T ss_pred             CccccCCCHHHHHHHHHHHHhcc--CCCccchhHHHHHHHHHHHHHHHHHHHHcCCCCc---ccccccCcHHHHHHHHHh
Confidence            34445679999999987766644  6777665544444434445789999999997653   35777776 677655556


Q ss_pred             hhC----Cc-------------------------------------------cc--c---cccEEEEcCcc--cccccCh
Q psy10669        115 KAL----PT-------------------------------------------NN--A---RFDFLSSGTTC--YSRCLDY  140 (337)
Q Consensus       115 aLl----~~-------------------------------------------~~--a---~pklII~~~S~--~~~~~d~  140 (337)
                      ++.    ++                                           .+  +   ++++|++++.+  .+...|+
T Consensus       103 ~~~~~~~~~g~~il~~~~e~~s~~~~~~~~a~~~g~~v~~~~~~~~g~~~~~~~~~~i~~~t~lv~~~~v~~~tG~~~pi  182 (405)
T d1jf9a_         103 SWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFDEKTRLLAITHVSNVLGTENPL  182 (405)
T ss_dssp             HHHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCTTSCBCGGGHHHHCCTTEEEEEEESBCTTTCCBCCH
T ss_pred             cccccccCCCCEEEEEeCcccchHHHHHHHHHHcCcEEEEECCCCCCcCCHHHHHHhccCCcEEEEEecCCCcccccCch
Confidence            531    11                                           00  1   26888887444  3699999


Q ss_pred             HHHHHHhhhcCCeEEEeccccccccc---------ee-eeec----cCC-chhh-h-hHHHHHhhccC------------
Q psy10669        141 ARFRQICDETDSIMFADMSHISGLIA---------GV-KGVT----KTG-EKIL-Y-DYEEKINNAVF------------  191 (337)
Q Consensus       141 ~~l~eia~~~ga~l~vD~AH~~Gli~---------g~-~~T~----~~G-g~i~-~-~l~~~i~~~~~------------  191 (337)
                      ++|.++|+++|++++||++|++|.+.         .+ .+++    |+| |++. . ++.+.+.+...            
T Consensus       183 ~~i~~~~~~~g~~~~vD~~q~~g~~~id~~~~~~D~~~~s~hK~~Gp~G~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~~  262 (405)
T d1jf9a_         183 AEMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHKLYGPTGIGILYVKEALLQEMPPWEGGGSMIATVSLSE  262 (405)
T ss_dssp             HHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEEGGGTTSCSSCEEEEECHHHHTTCCCSSCSSSSEEECCTTT
T ss_pred             HHhhhHHHHcCCeeecccceeccccccchhhcCCceeeccccccccCCCceeeeechhhhcccCcccccccccCcccccc
Confidence            99999999999999999999999887         12 3343    344 4433 2 33332221110            


Q ss_pred             -------C--CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecC-CCCCeEEEEEecCCC
Q psy10669        192 -------P--SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTG-GTDVHLILIDLRKNK  261 (337)
Q Consensus       192 -------p--~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~-~t~~h~v~V~~~~~~  261 (337)
                             |  .-.||++.+.++++..+++.+.+...+...++....++++.+.+.+.+.....+ ....+++.+.  -.+
T Consensus       263 ~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~L~~~~~~~l~~~~~~~~~~~~~r~~ivsf~--~~~  340 (405)
T d1jf9a_         263 GTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLGVIAFN--LGK  340 (405)
T ss_dssp             CCEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTSTTEEEESCTTCCSEEEEE--ETT
T ss_pred             ccccccchhhhcCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHhhhhcCCcccccCCcCcCcEEEEE--cCC
Confidence                   0  125899999999999999988766667778888888888888888876655443 2334454444  456


Q ss_pred             cchHHHHHHHhhcCceec
Q psy10669        262 LTGSKVELVLEEIAIACN  279 (337)
Q Consensus       262 ~~~~~~~~~L~~~gI~v~  279 (337)
                      ..+.++...|++.||.++
T Consensus       341 ~~~~~~~~~L~~~gI~v~  358 (405)
T d1jf9a_         341 HHAYDVGSFLDNYGIAVR  358 (405)
T ss_dssp             CCHHHHHHHHHHTTEECE
T ss_pred             CCHHHHHHHHHHCCcEEE
Confidence            678899999999999886

>d2e7ja1 c.67.1.9 (A:8-371) Selenocysteinyl-tRNA synthase (SepSecS) {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.63  E-value=7e-15  Score=137.07  Aligned_cols=207  Identities=14%  Similarity=0.164  Sum_probs=121.1

Q ss_pred             cCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccc--hHH--HHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHH
Q psy10669         38 SENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQ--FID--EIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVC  113 (337)
Q Consensus        38 sen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~--~~~--~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~  113 (337)
                      ..+.++|++++|+.+     |+.|++..++..+..  ...  .+-...++++++++|++.     .+.++|||+||++++
T Consensus        10 ~~~~l~~~a~~a~~~-----~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~A~~~g~e~-----~~~t~g~t~a~~~~~   79 (364)
T d2e7ja1          10 TGGKLTEEARQALLE-----WGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLGCDV-----ARVTNGAREAKFAVM   79 (364)
T ss_dssp             HTCCCCHHHHHHHHH-----C--------------------CCHHHHHHTHHHHHTTSSE-----EEEESSHHHHHHHHH
T ss_pred             cCCcCCHHHHHHHHH-----HhcCCchhccccccccccccChHHHHHHHHHHHHHhCcCE-----EEEECcHHHHHHHHH
Confidence            677899999999863     566776665544321  100  122223478999999985     345566689999999


Q ss_pred             HhhCCc------------------------------------------------cccc---ccEEEEc-Ccc-cccccCh
Q psy10669        114 EKALPT------------------------------------------------NNAR---FDFLSSG-TTC-YSRCLDY  140 (337)
Q Consensus       114 ~aLl~~------------------------------------------------~~a~---pklII~~-~S~-~~~~~d~  140 (337)
                      .+++++                                                +..+   +++|++. .++ ++...|+
T Consensus        80 ~al~~~gd~Vi~~~~~h~s~~~~~~~~g~~v~~v~~~~~~~~~i~~~~l~~~i~~~~k~~~~~lv~i~~~~n~tG~~~~l  159 (364)
T d2e7ja1          80 HSLAKKDAWVVMDENCHYSSYVAAERAGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALITYPDGNYGNLPDV  159 (364)
T ss_dssp             HHHCCTTCEEEEETTCCHHHHHHHHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEEESSCTTTCCCCCH
T ss_pred             HHHhCCCcEEEeecccccccchHHHhccceEEEeeeccccccccCHHHHHhhhhhhcccCCceEEEeecCCCCCceeecc
Confidence            999875                                                0001   3466655 333 4678899


Q ss_pred             HHHHHHhhhcCCeEEEeccccccccc------e---eeeec-c------CCchhhh--hHHHHHhhccCCC-------CC
Q psy10669        141 ARFRQICDETDSIMFADMSHISGLIA------G---VKGVT-K------TGEKILY--DYEEKINNAVFPS-------LQ  195 (337)
Q Consensus       141 ~~l~eia~~~ga~l~vD~AH~~Gli~------g---~~~T~-~------~Gg~i~~--~l~~~i~~~~~p~-------~~  195 (337)
                      ++|.++|+++|+++++|+||++|.++      +   +++++ |      .+|++..  ++.+.+.....+.       ..
T Consensus       160 ~~I~~ia~~~~i~livD~a~~~g~~~~~~~~~g~D~~~~S~~K~~~~~g~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (364)
T d2e7ja1         160 KKIAKVCSEYDVPLLVNGAYAIGRMPVSLKEIGADFIVGSGHKSMAASGPIGVMGMKEEWAEIVLRRSEKYKNKEVELLG  239 (364)
T ss_dssp             HHHHHHHHTTTCCEEEECTTTBTTBCCCHHHHTCSEEEEEHHHHSSCCSSCEEEEECTTTTTTTTCBCSSCTTSBGGGTT
T ss_pred             hhheeccccccchhhccccchhhhhhhcccccccceeeeccccccCCCCCEEEEEECHHHHHHHHhhccccCcccccccc
Confidence            99999999999999999999999886      1   33332 2      1366554  3433322211111       12


Q ss_pred             CCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCe-EEEEE
Q psy10669        196 GGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVH-LILID  256 (337)
Q Consensus       196 g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h-~v~V~  256 (337)
                      ++.....+.++..++..+. ...+. ..+.+++++++.+.|.+.|+.+.+....+| ++.+.
T Consensus       240 ~~~~~~~~~~~~~~l~~~~-~~~~~-~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~  299 (364)
T d2e7ja1         240 CTARGATIITLMASFPHVR-ERIKR-WDEEVEKARRFAAEMEKLGIKQLGDNPHNHDLMFFH  299 (364)
T ss_dssp             CCCCSHHHHHHHHHHHHHH-HHGGG-HHHHHHHHHHHHHHHHHTTCEEESSSSCCSSEEEEE
T ss_pred             cccchhHHHHHHHHHHHHH-HHHHH-HHHHHHHHHHHHHHHHHcCCeecCCCCCCcceEEEe
Confidence            3344445555555555543 22223 344568999999999999999886333333 33343

>d1v72a1 c.67.1.1 (A:6-350) Phenylserine aldolase PSALD {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Phenylserine aldolase PSALD
species: Pseudomonas putida [TaxId: 303]

Probab=99.62  E-value=5.2e-15  Score=134.38  Aligned_cols=230  Identities=14%  Similarity=0.145  Sum_probs=136.2

Q ss_pred             eeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeec-CCCchhHH
Q psy10669         34 ELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQP-YSGSPANF  110 (337)
Q Consensus        34 ~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~-~Sgt~AN~  110 (337)
                      .-++|+||.  ||+|++|+... ...+..|      |...    ++...++++++++||++.     .+.| +|||.||.
T Consensus         5 ~~f~s~n~~g~~P~v~~A~~~a-~~~~~~~------~~~~----~~~~~l~~~la~~~g~~~-----~v~f~~sGt~An~   68 (345)
T d1v72a1           5 LGFSSDNIAGASPEVAQALVKH-SSGQAGP------YGTD----ELTAQVKRKFCEIFERDV-----EVFLVPTGTAANA   68 (345)
T ss_dssp             CBCSCGGGCCCCHHHHHHHHHT-TSSCCCS------TTCS----HHHHHHHHHHHHHHTSCC-----EEEEESCHHHHHH
T ss_pred             cCcCCCCCCCCCHHHHHHHHHH-hccCccc------cCCC----HHHHHHHHHHHHHHCCCc-----EEEECCchHHHHH
Confidence            457899997  99999999753 1111111      2222    333445579999999875     5666 77899999


Q ss_pred             HHHHhhCCc-------------------------------------------------cc-c---cc--cEEEEcC-ccc
Q psy10669        111 AVCEKALPT-------------------------------------------------NN-A---RF--DFLSSGT-TCY  134 (337)
Q Consensus       111 ~v~~aLl~~-------------------------------------------------~~-a---~p--klII~~~-S~~  134 (337)
                      .++.+++.+                                                 +. .   .|  .++.+.. +..
T Consensus        69 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (345)
T d1v72a1          69 LCLSAMTPPWGNIYCHPASHINNDECGAPEFFSNGAKLMTVDGPAAKLDIVRLRERTREKVGDVHTTQPACVSITQATEV  148 (345)
T ss_dssp             HHHHTSCCTTEEEEECTTSHHHHSSTTHHHHHTTSCEEEECCCGGGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCTT
T ss_pred             HHHHHHHhcCCccccccccceeeechhhHHHhcCcccccccccccccccHHHhhhhhcccccccccccceeeeeeccccc
Confidence            998888653                                                 00 0   12  3333332 233


Q ss_pred             ccccC---hHHHHHHhhhcCCeEEEeccccccccce---------------eeeecc-CCchh-----h-h--hHHH-HH
Q psy10669        135 SRCLD---YARFRQICDETDSIMFADMSHISGLIAG---------------VKGVTK-TGEKI-----L-Y--DYEE-KI  186 (337)
Q Consensus       135 ~~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~g---------------~~~T~~-~Gg~i-----~-~--~l~~-~i  186 (337)
                      +...+   +.++.++|+++|+++++|++|..+....               ....++ +|+..     . .  .... ..
T Consensus       149 ~~~~~~~~~~~i~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (345)
T d1v72a1         149 GSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKNGVLAAEAIVLFNTSLATEMS  228 (345)
T ss_dssp             SCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGGGTCCEEEECCGGGTCSSCEEEEESSGGGHHHHH
T ss_pred             cccccchhhhhHHHHHHhcCceeeecccccceeccccccCHHHhhccccccccccCccccccccccccccchhhhhhhcc
Confidence            44444   4556678999999999999998766651               111112 22211     1 1  1111 11


Q ss_pred             hhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCCCcchH
Q psy10669        187 NNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKNKLTGS  265 (337)
Q Consensus       187 ~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~~~~~~  265 (337)
                      ....+.+..  ..... ++.+.+........+.++..+...+.+++++.|.+. |+.+. ++++++++++++.     . 
T Consensus       229 ~~~~~~~~~--~~~~~-~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~-~p~~~niv~~~~~-----~-  298 (345)
T d1v72a1         229 YRRKRAGHL--SSKMR-FLSAQIDAYLTDDLWLRNARKANAAAQRLAQGLEGLGGVEVL-GGTEANILFCRLD-----S-  298 (345)
T ss_dssp             HHHHHTTCC--CSSTH-HHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEE-SCCCSSEEEEEEC-----H-
T ss_pred             ccccccccc--cchhh-HHhhhhHHHHHHhhhhhhccchhhHHHHHHHHHHhcCCcEec-cCCCccEEEEEcC-----H-
Confidence            211122112  22222 222233333334455778888889999999999884 77665 4578899998874     2 


Q ss_pred             HHHHHHhhcCceeccCc----ccchhhh
Q psy10669        266 KVELVLEEIAIACNKNT----GISLAAE  289 (337)
Q Consensus       266 ~~~~~L~~~gI~v~~~~----girig~~  289 (337)
                      ...+.|.+.||.+..+.    .|||.+.
T Consensus       299 ~~~~~L~~~gi~v~~~~~~~~~lR~~~~  326 (345)
T d1v72a1         299 AMIDALLKAGFGFYHDRWGPNVVRFVTS  326 (345)
T ss_dssp             HHHHHHHHTTCBCBCSSSSTTEEEEECC
T ss_pred             HHHHHHHHcCCCccccCCCCCEEEEECC
Confidence            34455666688876554    6888654

>d1h0ca_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=7e-14  Score=131.88  Aligned_cols=241  Identities=11%  Similarity=0.054  Sum_probs=167.2

Q ss_pred             ceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCC-CchhHH
Q psy10669         32 GIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYS-GSPANF  110 (337)
Q Consensus        32 ~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~S-gt~AN~  110 (337)
                      .+-+.|.=--++|.|++||....        .+.|   + ....++...+++.++++||++.+   ..|.|++ ||.++.
T Consensus        20 ~~l~~pGP~~~~~~Vl~am~~~~--------i~HR---s-~~f~~i~~ea~~~l~~llg~~~~---~~ii~~gsgT~a~~   84 (388)
T d1h0ca_          20 QLLLGPGPSNLPPRIMAAGGLQM--------IGSM---S-KDMYQIMDEIKEGIQYVFQTRNP---LTLVISGSGHCALE   84 (388)
T ss_dssp             CEECSSSCCCCCHHHHHHHTCCC--------CCTT---S-HHHHHHHHHHHHHHHHHHTCCCS---EEEEESSCHHHHHH
T ss_pred             CccccCCCCCCCHHHHHHhCcCC--------CCCC---C-HHHHHHHHHHHHHHHHHhCCCCC---cEEEEcCcHHHHHH
Confidence            45566666667999999986321        2223   2 34456777789999999999763   3566654 488998


Q ss_pred             HHHHhhCCc--------------------------------------------c-cc--cccEEEEcCcc--cccccChH
Q psy10669        111 AVCEKALPT--------------------------------------------N-NA--RFDFLSSGTTC--YSRCLDYA  141 (337)
Q Consensus       111 ~v~~aLl~~--------------------------------------------~-~a--~pklII~~~S~--~~~~~d~~  141 (337)
                      +++..++++                                            + ..  +++++.+.+.+  .+...|++
T Consensus        85 ~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~n~tG~i~pi~  164 (388)
T d1h0ca_          85 AALVNVLEPGDSFLVGANGIWGQRAVDIGERIGARVHPMTKDPGGHYTLQEVEEGLAQHKPVLLFLTHGESSTGVLQPLD  164 (388)
T ss_dssp             HHHHHHCCSSCCEEECBSSHHHHHHHHHHHHHC--CBCCBCCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCT
T ss_pred             HHHHHhhccCCceeeecccceeeeeccccccccccccccccCCccccchHHHHHHhccCCcceEEEeeeeeccccccCHH
Confidence            888999764                                            0 00  26888887544  46899999


Q ss_pred             HHHHHhhhcCCeEEEeccccccccc------e---ee-eecc-----CC-chhhh--hHHHHHhh---------------
Q psy10669        142 RFRQICDETDSIMFADMSHISGLIA------G---VK-GVTK-----TG-EKILY--DYEEKINN---------------  188 (337)
Q Consensus       142 ~l~eia~~~ga~l~vD~AH~~Gli~------g---~~-~T~~-----~G-g~i~~--~l~~~i~~---------------  188 (337)
                      +|.++|+++|++++||++|++|.+.      +   +. +++|     .| |++..  +..+.+..               
T Consensus       165 ~i~~~~~~~g~~~~vD~~qs~g~~~~d~~~~~~D~~~~s~~K~~~gp~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (388)
T d1h0ca_         165 GFGELCHRYKCLLLVDSVASLGGTPLYMDRQGIDILYSGSQKALNAPPGTSLISFSDKAKKKMYSRKTKPFSFYLDIKWL  244 (388)
T ss_dssp             THHHHHHTTTCEEEEECTTTTTTSCCCTTTTTCSEEEEESSSTTCCCTTCEEEEECHHHHHHHTTCSSCCSCSTTCHHHH
T ss_pred             HHHHHhhcccccceeccccccccccccccccccceecccccccccCCCceEEEeecHHHHHhhhhccccccccccccchh
Confidence            9999999999999999999999887      1   23 3333     23 33321  22222211               


Q ss_pred             -------ccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCC---CCeEEEEEec
Q psy10669        189 -------AVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGT---DVHLILIDLR  258 (337)
Q Consensus       189 -------~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t---~~h~v~V~~~  258 (337)
                             .......++|+.+.++++..++..+.+...+...++..++++++.+.+.+.|+.+.....   .++++.+.+.
T Consensus       245 ~~~~~~~~~~~~~~~t~~~~~~~~~~~al~~~~~~g~~~~~~~~~~l~~~l~~~~~~~g~~~~~~~~~~rs~~i~~~~~p  324 (388)
T d1h0ca_         245 ANFWGCDDQPRMYHHTIPVISLYSLRESLALIAEQGLENSWRQHREAAAYLHGRLQALGLQLFVKDPALRLPTVTTVAVP  324 (388)
T ss_dssp             HHHTTCSSSCCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCBSSCSGGGBCTTEEEEECC
T ss_pred             hhhhhhccccccccccccHHHHHHHHHHHHHHHHhccccccccccchhHHHHHHHhhcCcccccCCHHHcCCeEEEEECC
Confidence                   111223578999999999999998876666888889999999999999998887764221   1345555553


Q ss_pred             CCCcchHHHHHHH-hhcCceeccCc------ccchhh
Q psy10669        259 KNKLTGSKVELVL-EEIAIACNKNT------GISLAA  288 (337)
Q Consensus       259 ~~~~~~~~~~~~L-~~~gI~v~~~~------girig~  288 (337)
                       .++++.++.+.| +++||.+..-.      .||||+
T Consensus       325 -~~~~~~~~~~~L~~~~gI~v~~G~~~~~~~~iRis~  360 (388)
T d1h0ca_         325 -AGYDWRDIVSYVIDHFDIEIMGGLGPSTGKVLRIGL  360 (388)
T ss_dssp             -TTCCHHHHHHHHHHHHCEECEECCGGGTTTEEEEEC
T ss_pred             -CCCCHHHHHHHHHhcCCEEEeCCchhhcCCEEEEeC
Confidence             467888887776 45799876422      578884

>d1c4ka2 c.67.1.5 (A:108-569) Ornithine decarboxylase major domain {Lactobacillus sp., strain 30a [TaxId: 1591]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Ornithine decarboxylase major domain
domain: Ornithine decarboxylase major domain
species: Lactobacillus sp., strain 30a [TaxId: 1591]

Probab=99.60  E-value=6.6e-15  Score=143.00  Aligned_cols=202  Identities=15%  Similarity=0.104  Sum_probs=140.8

Q ss_pred             HHHHHHhhcCCCCCCCcceeecCCCc-hhHHHHHHhhCCc-------------------c--------------------
Q psy10669         81 AQQRSLKAFNLDPEQWGCNVQPYSGS-PANFAVCEKALPT-------------------N--------------------  120 (337)
Q Consensus        81 ~~~~~a~lfg~~~~~~~~~v~~~Sgt-~AN~~v~~aLl~~-------------------~--------------------  120 (337)
                      +++++|++||+++     .+.++||| .+|++++.+++++                   .                    
T Consensus        71 ae~~~A~~~ga~~-----a~f~~~Gtt~~n~a~i~a~~~~gd~Vi~~~~~H~Sv~~~~~~l~~~~~~~~~~~~~~~g~~~  145 (462)
T d1c4ka2          71 AEKHAARVYNADK-----TYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNSALAMAGGRPVYLQTNRNPYGFIG  145 (462)
T ss_dssp             HHHHHHHHTTCSE-----EEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHTTTTCCEEEEECEEECTTCCEE
T ss_pred             HHHHHHHHhCCCe-----EEEECCchHHHHHHHHHHhcCCCCeEEecccchHHHHHHHHHHhcCCceeeecccccccccC
Confidence            3478899999986     57778885 5799999999876                   0                    


Q ss_pred             ----------------------cc---cc-cEEEEc-CcccccccChHHHHHHhhhcCCeEEEeccccccccc-------
Q psy10669        121 ----------------------NA---RF-DFLSSG-TTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA-------  166 (337)
Q Consensus       121 ----------------------~a---~p-klII~~-~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-------  166 (337)
                                            .+   +| .++|+. .+.++...|+++|.++|+++|++|+||+||++|...       
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~G~~~dl~~I~~ia~~~g~~l~vD~A~~~~~~~~~~~~~~  225 (462)
T d1c4ka2         146 GIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLGTYDGTIYNAHEVVKRIGHLCDYIEFDSAWVGYEQFIPMMRNS  225 (462)
T ss_dssp             EECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESBCTTSEEECHHHHHHHHGGGBSEEEEECTTCCGGGSSGGGGGG
T ss_pred             CCChHHhhHHHHHhhhhhhcHHhhhccCCceeEEEEeeeeccchhhHHHHHHHHHHcCCEEEEechhhccccccCcCCcc
Confidence                                  00   12 234444 555688899999999999999999999999998764       


Q ss_pred             ----e-----------ee-eecc-----CCchhhh--h--H--------HHHHhhccCCCCCCCCcHHHHHHHHHHHHHH
Q psy10669        167 ----G-----------VK-GVTK-----TGEKILY--D--Y--------EEKINNAVFPSLQGGPHNHAIGAIATAMLQA  213 (337)
Q Consensus       167 ----g-----------~~-~T~~-----~Gg~i~~--~--l--------~~~i~~~~~p~~~g~~~~~~iaala~a~~e~  213 (337)
                          |           ++ ++||     .||.++.  +  +        .+.++.+......++|+...++++.+++.++
T Consensus       226 ~~~~g~~~~~~~~~D~~~~S~HK~lg~~~~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~t~sp~~~~~asl~~a~~~~  305 (462)
T d1c4ka2         226 SPLLIDDLGPEDPGIIVVQSVHKQQAGFSQTSQIHKKDSHIKGQLRYCDHKHFNNSFNLFMSTSPFYPMYAALDVNAAMQ  305 (462)
T ss_dssp             CTTSCCCCCTTSCEEEEEECHHHHSSCCTTCEEEEEECGGGTTSTTCCCHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHH
T ss_pred             hhhccccccccCCccEEEEecCcccccccceEEEEeccccccccchhhhHHHHHHhhhhcccCCchHHHHHHHHHHHHHH
Confidence                1           22 3332     2333332  1  1        2345555455557899999999999999998


Q ss_pred             hchhhHHHHHHHHHHHHHHHHHHHhCCCEEecC-------------------------------------C-------CC
Q psy10669        214 QSDEFKSYQAQVKANASHLSDEMIKRGYHVVTG-------------------------------------G-------TD  249 (337)
Q Consensus       214 ~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~-------------------------------------~-------t~  249 (337)
                      ....++++.++.+++++++++++.+.+......                                     +       .|
T Consensus       306 ~~~~g~~l~~~~~~~a~~~r~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D  385 (462)
T d1c4ka2         306 EGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDGDTEDMANNIDYWRFEKGAKWHAYEGYGDNQYYVD  385 (462)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEETTEEGGGSCHHHHTTCGGGGBCCTTCTTTCCTTCCTTCEEEC
T ss_pred             HhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccccccccccchHhhhcccchhccCCcchhccccccCccceecc
Confidence            766678999999999999999998853211100                                     0       01


Q ss_pred             CeEEEEEe----------cCCCcchHHHHHHHhhcCceeccCc--ccchh
Q psy10669        250 VHLILIDL----------RKNKLTGSKVELVLEEIAIACNKNT--GISLA  287 (337)
Q Consensus       250 ~h~v~V~~----------~~~~~~~~~~~~~L~~~gI~v~~~~--girig  287 (337)
                      ...+.+.+          ...|+++.++++.|.++||.+++..  .||+.
T Consensus       386 p~k~~l~~~gi~~~~g~~~~~G~~~~~~~~~L~~~gI~~e~~~~~~i~~~  435 (462)
T d1c4ka2         386 PNKFMLTTPGINPETGDYEDFGVPATIVANYLRDHGIIPEKSDLNSILFL  435 (462)
T ss_dssp             TTEEEEECSSEETTTTEECSSCCCHHHHHHHHHHTTCCCSEECSSEEEEE
T ss_pred             cceeEEecCCccccccchhhcCCcHHHHHHHHHHcCCeeeccCCCeEEEE
Confidence            22233432          2346678999999999999887654  56764

>d1c7ga_ c.67.1.2 (A:) Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 549]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tyrosine phenol-lyase
species: Erwinia herbicola [TaxId: 549]

Probab=99.58  E-value=4.3e-14  Score=137.90  Aligned_cols=233  Identities=14%  Similarity=0.186  Sum_probs=156.8

Q ss_pred             ceeeeccCCCC----CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCch
Q psy10669         32 GIELIASENFT----SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSP  107 (337)
Q Consensus        32 ~i~l~asen~~----~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~  107 (337)
                      ..-+++|++.+    |..+-.||...+   ++....|...|+|...+.+||    ++++++||.++     .+.++||+.
T Consensus        34 n~~~l~~~~v~iDl~sDs~t~am~~~~---~aa~~~GDd~Y~~dpt~~~lE----~~~a~l~G~e~-----al~~~SGt~  101 (456)
T d1c7ga_          34 NTFLLNSKDIYIDLLTDSGTNAMSDKQ---WAGMMIGDEAYAGSENFYHLE----KTVKELFGFKH-----IVPTHQGRG  101 (456)
T ss_dssp             CGGGSCGGGCSEECSCSSSCCCEEHHH---HHHTTSCCCCSSSCHHHHHHH----HHHHHHHCCSE-----EEEESSHHH
T ss_pred             CcccccccceeeEcccCCCcccchHHH---HHHHhccchhccCCchHHHHH----HHHHHHhCCCe-----EEECCCHHH
Confidence            34466777755    333333333221   122346778899999999999    57899999997     688899999


Q ss_pred             hHHHHHHhhCCc------------------------------------------------ccc---------cccEEEEc
Q psy10669        108 ANFAVCEKALPT------------------------------------------------NNA---------RFDFLSSG  130 (337)
Q Consensus       108 AN~~v~~aLl~~------------------------------------------------~~a---------~pklII~~  130 (337)
                      ||..++.+++++                                                ++.         +..+|+++
T Consensus       102 An~~a~~~l~~~Gd~Vi~~~~f~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~I~~~~~~~~~~i~~e  181 (456)
T d1c7ga_         102 AENLLSQLAIKPGQYVAGNMYFTTTRFHQEKNGATFVDIVRDEAHDASLNLPFKGDIDLNKLATLIKEKGAENIAYICLA  181 (456)
T ss_dssp             HHHHHHHHHCCTTEEEEESSCCHHHHHHHHHTTEEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEE
T ss_pred             HHHHHHHHhcCCCCeEecCcchHHHHHHHHHcCceeeeccccccccccccCCccccCCHHHHHHHhhhcCCccceeEEee
Confidence            999999999875                                                000         12366665


Q ss_pred             Cccc---cccc---ChHHHHHHhhhcCCeEEEecccccccc--------------------------ceeeeecc-----
Q psy10669        131 TTCY---SRCL---DYARFRQICDETDSIMFADMSHISGLI--------------------------AGVKGVTK-----  173 (337)
Q Consensus       131 ~S~~---~~~~---d~~~l~eia~~~ga~l~vD~AH~~Gli--------------------------~g~~~T~~-----  173 (337)
                      .+.+   +.+.   |++++++||+++|+.|++|+||..|..                          .+++++.+     
T Consensus       182 ~~~n~~gG~~~~~~~l~~i~~~a~~~~~~~~~D~a~~~~~a~~~~~~~~~~~~~~i~~i~~~~~~~ad~~s~s~~K~~~~  261 (456)
T d1c7ga_         182 VTVNLAGGQPVSMANMRAVHEMASTYGIKIFYDATRCVENAYFIKEQEAGYENVSIKDIVHEMFSYADGCTMSGKKDCLV  261 (456)
T ss_dssp             SSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEEEETTTTTCC
T ss_pred             ecccccccceecHHHHHHHHHHHHHcCCEEEEEcchhhcchhhhcccccccCCCChhhhccccccccccEEEeccccccc
Confidence            3332   3344   455677899999999999999987531                          12344433     


Q ss_pred             -CCchhhh---hHHHHHhh----ccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEec
Q psy10669        174 -TGEKILY---DYEEKINN----AVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVT  245 (337)
Q Consensus       174 -~Gg~i~~---~l~~~i~~----~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~  245 (337)
                       .||++++   ++.++++.    ......+|+.....++++++++.+...   .+|.++.++++++|++.|.+.|+.++.
T Consensus       262 ~~GG~i~~~~~~l~~~~r~~~~~~~g~~~~g~~~~~~~~a~a~~l~e~~~---~~~l~~r~~~~~~L~e~L~~~g~~vv~  338 (456)
T d1c7ga_         262 NIGGFLCMNDEEMFSAAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQ---YEYIEHRVKQVRYLGDKLREAGVPIVE  338 (456)
T ss_dssp             SSCEEEEESCHHHHHHHHHHHHHHTCCTTTTTCCHHHHHHHHHHHHHHTC---HHHHHHHHHHHHHHHHHHHHTTCCBCS
T ss_pred             cceeEEEcCCHHHHHHHHHhccccCCCcccchhhHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHhccCCccc
Confidence             3788875   35554332    122334677888889999999888754   467888899999999999999999885


Q ss_pred             CCCCCeEEEEEecC-------CCcchHH-HHHHHhhcCceecc
Q psy10669        246 GGTDVHLILIDLRK-------NKLTGSK-VELVLEEIAIACNK  280 (337)
Q Consensus       246 ~~t~~h~v~V~~~~-------~~~~~~~-~~~~L~~~gI~v~~  280 (337)
                       ....|.+.+|...       ....+.. +...+.+.||.+..
T Consensus       339 -p~g~~~v~vda~~~~~~i~~~~~~~~~~~~~l~~~~GIr~~~  380 (456)
T d1c7ga_         339 -PTGGHAVFLDARRFCPHLTQDQFPAQSLAASIYMETGVRSME  380 (456)
T ss_dssp             -SCCSSEEEEEHHHHCTTSCGGGCHHHHHHHHHHHHHSEECEE
T ss_pred             -CCCCcceeEechhhccCCCcccccHHHHHHHHHHHhCeeecc
Confidence             4678999888532       1222332 33444567887643

>d1elua_ c.67.1.3 (A:) Cystine C-S lyase C-des {Synechocystis sp. [TaxId: 1143]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystine C-S lyase C-des
species: Synechocystis sp. [TaxId: 1143]

Probab=99.57  E-value=4.4e-14  Score=133.11  Aligned_cols=247  Identities=13%  Similarity=0.086  Sum_probs=165.2

Q ss_pred             eccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHH
Q psy10669         36 IASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCE  114 (337)
Q Consensus        36 ~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~  114 (337)
                      .++-..+|..|++++...+.+.+..   |...+.......++...+|+.++++||+++    .+|.+++| |.++..++.
T Consensus        13 ~~~~~~~p~~v~ea~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~r~~la~~~~~~~----~~i~~~~g~t~a~~~~~~   85 (381)
T d1elua_          13 FGGQGILPTVALEAITAMYGYLQEN---GPFSIAANQHIQQLIAQLRQALAETFNVDP----NTITITDNVTTGCDIVLW   85 (381)
T ss_dssp             TTTCCCCCHHHHHHHHHHHHHHHHH---CSSSHHHHHHHHHHHHHHHHHHHHHTTSCG----GGEEEESSHHHHHHHHHH
T ss_pred             CCcccCCCHHHHHHHHHHHHHhhcC---CCccchhhHHHHHHHHHHHHHHHHHhCCCc----ccEEEECChHHHhhhcch
Confidence            4555667889999998765543221   222334445556666678899999999986    36777777 788766677


Q ss_pred             hhC-Cc---------------------------------------------cc--c---cccEEEEcCc-c-cccccChH
Q psy10669        115 KAL-PT---------------------------------------------NN--A---RFDFLSSGTT-C-YSRCLDYA  141 (337)
Q Consensus       115 aLl-~~---------------------------------------------~~--a---~pklII~~~S-~-~~~~~d~~  141 (337)
                      ++. ++                                             .+  +   +++++++..- + .+...|++
T Consensus        86 ~l~~~~g~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~i~~~t~~v~i~~~~n~tG~~~~~~  165 (381)
T d1elua_          86 GLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGPKTRLVILSHLLWNTGQVLPLA  165 (381)
T ss_dssp             HSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCTTEEEEEEESBCTTTCCBCCHH
T ss_pred             hhhhcCCceEEEeccccceeeeccccccccccccccccccccccccchHHHHHHhhhcccccccccccccccccccchhh
Confidence            773 32                                             01  1   1577777643 3 47999999


Q ss_pred             HHHHHhhh----cCCeEEEeccccccccc---------eeeeecc------CC-chhh-h-hHHHHHhhccCC-------
Q psy10669        142 RFRQICDE----TDSIMFADMSHISGLIA---------GVKGVTK------TG-EKIL-Y-DYEEKINNAVFP-------  192 (337)
Q Consensus       142 ~l~eia~~----~ga~l~vD~AH~~Gli~---------g~~~T~~------~G-g~i~-~-~l~~~i~~~~~p-------  192 (337)
                      +|.+||++    +|+++++|++|++|...         .+++++|      .| |++. . ++.+.+++....       
T Consensus       166 ~I~~l~~~~~~~~~~~~~vD~~~~~g~~~~~~~~~~~D~~~~s~~K~~~~p~G~g~l~~~~~~~~~~~p~~~~~~~~~~~  245 (381)
T d1elua_         166 EIMAVCRRHQGNYPVRVLVDGAQSAGSLPLDFSRLEVDYYAFTGHKWFAGPAGVGGLYIHGDCLGEINPTYVGWRSITYG  245 (381)
T ss_dssp             HHHHHHHHCCSSSCCEEEEECTTTBTTBCCCTTTSCCSEEEEESSSTTCCCTTCEEEEECTTTGGGCCCCSCCTTTEEEC
T ss_pred             HHHHHHhhcccccccccccccccccccccccccccccccccccccccccccchhhHHHhhHHHHHhcCcccccccccccc
Confidence            99999987    47999999999999876         1233332      23 3332 2 333323221110       


Q ss_pred             --------------CCCCCCcHHHHHHHHHHHHHHhchhh-HHHHHHHHHHHHHHHHHHHh-CCCEEecC-CCCCeEEEE
Q psy10669        193 --------------SLQGGPHNHAIGAIATAMLQAQSDEF-KSYQAQVKANASHLSDEMIK-RGYHVVTG-GTDVHLILI  255 (337)
Q Consensus       193 --------------~~~g~~~~~~iaala~a~~e~~~~~~-~~y~~~v~~na~~l~~~L~~-~G~~v~~~-~t~~h~v~V  255 (337)
                                    ...|+++...+.++..++..+..... +...++..++++++.+.|++ .|+++++. ....+++..
T Consensus       246 ~~~~~~~~~~~~~~~~~gt~~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~vsf  325 (381)
T d1elua_         246 AKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQLPHVHCLATSAPQAGLVSF  325 (381)
T ss_dssp             TTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSTTEEESCSSCCSSSEEEE
T ss_pred             cccccccccccccccccccccchhhhhhhhhhhhHHHhcccccchhhhhhHHHHHHHHHhcCCCeEecCCCCccccEEEE
Confidence                          13578999999999999888765444 45568999999999999999 58888862 123445555


Q ss_pred             EecCCCcchHHHHHHHhhcCceeccCc---ccchhhhh
Q psy10669        256 DLRKNKLTGSKVELVLEEIAIACNKNT---GISLAAEI  290 (337)
Q Consensus       256 ~~~~~~~~~~~~~~~L~~~gI~v~~~~---girig~~~  290 (337)
                      .+.. ......+.+.|++.||.++...   +|||+...
T Consensus       326 ~~~~-~~~~~~i~~~L~~~gi~v~~~~~~~~lRis~~~  362 (381)
T d1elua_         326 TVDS-PLGHRAIVQKLEEQRIYLRTIADPDCIRACCHY  362 (381)
T ss_dssp             EECS-SSCHHHHHHHHHHTTEECEEETTTTEEEEECCT
T ss_pred             EcCC-CCCHHHHHHHHHhCCcEEEecCCCCEEEEecCC
Confidence            5543 2356788899999999886433   79987543

>d2v1pa1 c.67.1.2 (A:5-471) Tryptophan indol-lyase (tryptophanase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Escherichia coli [TaxId: 562]

Probab=99.55  E-value=2.6e-14  Score=139.19  Aligned_cols=209  Identities=12%  Similarity=0.127  Sum_probs=138.7

Q ss_pred             cCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------
Q psy10669         58 YSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------  119 (337)
Q Consensus        58 y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------  119 (337)
                      ++....|.+.|+|+..+++||    ++++++||.++     .+.++||+.||..++.+++++                  
T Consensus        60 ~a~~~~gd~~Y~~~~~~~~le----~~~a~l~G~~~-----~~~~~sGt~A~~~a~~~~~~~g~~~~~~~~~~~i~~~~~  130 (467)
T d2v1pa1          60 QAAMMRGDEAFSGSRSYYALA----ESVKNIFGYQY-----TIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNY  130 (467)
T ss_dssp             HHHTTSCCCCSSSCHHHHHHH----HHHHHHTCCSE-----EEEECSSTTTHHHHHHHHHHHHHHHHCCCTTTCEEEESS
T ss_pred             HhhccccchhhcCCchHHHHH----HHHHHHHCCCE-----EEECCCCHHHHHHHHHHHhhccceEecCCCCcEEEEecc
Confidence            345567888999999999999    57899999996     688899999999999988432                  


Q ss_pred             ----------------------------------------cc----c-----cccEEEEcCcc---ccccc---ChHHHH
Q psy10669        120 ----------------------------------------NN----A-----RFDFLSSGTTC---YSRCL---DYARFR  144 (337)
Q Consensus       120 ----------------------------------------~~----a-----~pklII~~~S~---~~~~~---d~~~l~  144 (337)
                                                              .+    .     +.++|++....   .+.+.   ++++|+
T Consensus       131 ~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~i~~e~~~~~~gg~~~~~~~l~~i~  210 (467)
T d2v1pa1         131 FFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMY  210 (467)
T ss_dssp             CCHHHHHHHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHHHHHHHH
T ss_pred             cccccHHHHHHcCCeeeecccccccccccccccccCCCHHHHHHHHhhcCccccceeeecceeeccccccCCHHHHHHHH
Confidence                                                    00    0     12455554222   12333   566788


Q ss_pred             HHhhhcCCeEEEeccccccccc--------------------------eeeeec------cCCchhhh--h-HHH---HH
Q psy10669        145 QICDETDSIMFADMSHISGLIA--------------------------GVKGVT------KTGEKILY--D-YEE---KI  186 (337)
Q Consensus       145 eia~~~ga~l~vD~AH~~Gli~--------------------------g~~~T~------~~Gg~i~~--~-l~~---~i  186 (337)
                      +||++||++|++|+||..|...                          .+++++      +.||++++  + +..   ..
T Consensus       211 ~ia~~~g~~l~~D~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~d~~s~s~~K~~~~~~gg~i~~~~~~~~~~~~~~  290 (467)
T d2v1pa1         211 SIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDAMVPMGGLLCMKDDSFFDVYTEC  290 (467)
T ss_dssp             HHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCSEEEEESSSTTCCSSCEEEEECSGGGHHHHHHH
T ss_pred             HHHHHcCCEEEEechhhhccccccccccccccCCcccccchhhcccCCEEEecCCCCCCCCCceeEEecchhhhhHHHhh
Confidence            9999999999999999876432                          123332      24777764  1 221   11


Q ss_pred             h-----hccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCC-
Q psy10669        187 N-----NAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKN-  260 (337)
Q Consensus       187 ~-----~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~-  260 (337)
                      .     ...+| ..++.....+++++..+.+..   ..++.++..+|+++|+++|.+.|+.+..  +..|.+.++.... 
T Consensus       291 ~~~~~~~~~~~-~~~~~~~~~~~a~~~~~~~~~---~~~~~~~~~~~~~~l~~~L~~~~~~v~~--~~~~~~~~~~~~~~  364 (467)
T d2v1pa1         291 RTLCVVQEGFP-TYGGLEGGAMERLAVGLYDGM---NLDWLAYRIAQVQYLVDGLEEIGVVCQQ--AGGHAAFVDAGKLL  364 (467)
T ss_dssp             HHHHHHTTSSC-CCCCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHHHHHHHTTCCEEE--ECSSCEEEEHHHHS
T ss_pred             cccccccccCc-chhhhHHHHHHHHHHHhHHhh---hHHHHHHHHHHHHHHHHHHHhcCCcccC--CCccceeecchhhc
Confidence            1     11122 234555556666666655543   3578889999999999999999998865  6788887774321 


Q ss_pred             ------Cc-chHHHHHHHhhcCceeccC
Q psy10669        261 ------KL-TGSKVELVLEEIAIACNKN  281 (337)
Q Consensus       261 ------~~-~~~~~~~~L~~~gI~v~~~  281 (337)
                            .. ....+.++|.+.||.+..+
T Consensus       365 ~~~~~~~~~~~~~~~~ll~~~Gi~~~~~  392 (467)
T d2v1pa1         365 PHIPADQFPAQALACELYKVAGIRAVEI  392 (467)
T ss_dssp             TTSCGGGCHHHHHHHHHHHHHCEECEEE
T ss_pred             CCcchhhhhhHHHHHHHHHHcCCeeecc
Confidence                  11 1233556677889976543

>d1p3wa_ c.67.1.3 (A:) Cysteine desulfurase IscS {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cysteine desulfurase IscS
species: Escherichia coli [TaxId: 562]

Probab=99.53  E-value=3.9e-14  Score=134.19  Aligned_cols=232  Identities=15%  Similarity=0.118  Sum_probs=156.9

Q ss_pred             cCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHhh
Q psy10669         38 SENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEKA  116 (337)
Q Consensus        38 sen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~aL  116 (337)
                      +--.+||.|++++...+.+....|+|.++.|.-.....++...+|+++++++|+++    .+|.+++| |.++..++.++
T Consensus        10 a~~p~~~~v~ea~~~~~~~~~~~~np~~~~~~~~~~~~~~~~~~R~~iA~~lg~~~----~~I~~~~~~t~~l~~~~~~~   85 (391)
T d1p3wa_          10 ATTPVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADP----REIVFTSGATESDNLAIKGA   85 (391)
T ss_dssp             TCCCCCHHHHHHHHTTTSTTSCCCCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCG----GGEEEESSHHHHHHHHHHHH
T ss_pred             cccCCCHHHHHHHHHHHHhccccCCCchhhhHHHHHHHHHHHHHHHHHHHHcCCCC----CcEEEECCHHHHHHHHHhhh
Confidence            34466999999998876655445788887776666666666678999999999997    46888888 56765556654


Q ss_pred             C----Cc------------------------------------------cc--c---cccEEEEcCcc--cccccChHHH
Q psy10669        117 L----PT------------------------------------------NN--A---RFDFLSSGTTC--YSRCLDYARF  143 (337)
Q Consensus       117 l----~~------------------------------------------~~--a---~pklII~~~S~--~~~~~d~~~l  143 (337)
                      .    ++                                          .+  +   ++++|++.+.+  .+...|+++|
T Consensus        86 ~~~~~~~gd~Vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~~~~~i~~~T~lv~is~~~n~tG~~~~~~~I  165 (391)
T d1p3wa_          86 ANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRDDTILVSIMHVNNEIGVVQDIAAI  165 (391)
T ss_dssp             HHHHGGGCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHCCTTEEEEECCSBCTTTCCBCCHHHH
T ss_pred             hhhhcCCCCEEEEeccccchHHHHHHHHHHcCCEEEEeCCCCCCeEcHHHHHHhCCCCcEEEEEECCCCCCeeECCHHHH
Confidence            2    22                                          00  1   26888887444  3699999999


Q ss_pred             HHHhhhcCCeEEEeccccccccc---------eeeeecc-----CC-chhhh--hHHHHHhhccC------CCCCCCCcH
Q psy10669        144 RQICDETDSIMFADMSHISGLIA---------GVKGVTK-----TG-EKILY--DYEEKINNAVF------PSLQGGPHN  200 (337)
Q Consensus       144 ~eia~~~ga~l~vD~AH~~Gli~---------g~~~T~~-----~G-g~i~~--~l~~~i~~~~~------p~~~g~~~~  200 (337)
                      .++|+++|+++++|++|.+|.+.         .+.++++     .| |++..  +......+...      ....++.+.
T Consensus       166 ~~~~~~~~~~~ivD~~~~~g~~~~d~~~~~~D~~~~s~~k~~g~~g~g~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~  245 (391)
T d1p3wa_         166 GEMCRARGIIYHVDATQSVGKLPIDLSQLKVDLMSFSGHKIYGPKGIGALYVRRKPRVRIEAQMHGGGHERGMRSGTLPV  245 (391)
T ss_dssp             HHHHHHHTCEEEEECTTTBTTBCCCTTTSCCSEEEEESTTTTSCSSCEEEEECBTTBCCCCCSSCSSCTTTTTSCSCCCH
T ss_pred             HHHhccCCcEEEEeeccccCCccccchhccccccccccccccCCCceEEEEEecchhcccCCcccCCccccCcccCcchh
Confidence            99999999999999999999887         1223322     23 43332  22222221111      123678888


Q ss_pred             HHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecC-C--CCCeEEEEEecCCCcchHHHHHHHhhcCc
Q psy10669        201 HAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTG-G--TDVHLILIDLRKNKLTGSKVELVLEEIAI  276 (337)
Q Consensus       201 ~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~-~--t~~h~v~V~~~~~~~~~~~~~~~L~~~gI  276 (337)
                      +..++++.++.... ....+..+++.++...|.++|.+.+...+.. .  ...+++.  +...+..+..+...|.+.+|
T Consensus       246 ~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~i~v  321 (391)
T d1p3wa_         246 HQIVGMGEAYRIAK-EEMATEMERLRGLRNRLWNGIKDIEEVYLNGDLEHGAPNILN--VSFNYVEGESLIMALKDLAV  321 (391)
T ss_dssp             HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHTTTTSTTEEECSCTTTSCTTEEE--EEETTSCHHHHHHHTTTEEC
T ss_pred             hhhhhhhhhhhHHH-HHhhHHHHHHHHHHHHHHHHHHhhcCeeecccccccCceEEE--EEeCCCChHHHHHHhCCCEE
Confidence            99999988887775 4566778888888999999888865554432 1  2244443  44455677777777754443

>d1vjoa_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]

Probab=99.50  E-value=1.6e-12  Score=121.51  Aligned_cols=240  Identities=14%  Similarity=0.095  Sum_probs=160.6

Q ss_pred             eeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCC-CchhHHH
Q psy10669         33 IELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYS-GSPANFA  111 (337)
Q Consensus        33 i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~S-gt~AN~~  111 (337)
                      +-+.|-=--++|.|++||...     ..   +   +.+.+. .++-..+++.++++||+++.   ..|.|++ ||.+|.+
T Consensus        20 ~l~~PGP~~v~~~Vl~am~~~-----~~---~---hr~~ef-~~i~~~~r~~l~~ll~~~~~---~~i~~~g~gT~~~~~   84 (377)
T d1vjoa_          20 LLLGPGPSNAHPSVLQAMNVS-----PV---G---HLDPAF-LALMDEIQSLLRYVWQTENP---LTIAVSGTGTAAMEA   84 (377)
T ss_dssp             EECSSSCCCCCHHHHHHHSSC-----CC---C---TTSHHH-HHHHHHHHHHHHHHHTCCCS---CEEEESSCHHHHHHH
T ss_pred             eeecCCCCCCCHHHHHHhCcC-----CC---C---CCCHHH-HHHHHHHHHHHHHHhCCCCC---eEEEEcCcHHHHHHH
Confidence            444455556699999998532     11   1   223333 44555788899999999764   2566654 4889888


Q ss_pred             HHHhhCCc-------------------------------------------ccc----cccEEEEcC--cccccccChHH
Q psy10669        112 VCEKALPT-------------------------------------------NNA----RFDFLSSGT--TCYSRCLDYAR  142 (337)
Q Consensus       112 v~~aLl~~-------------------------------------------~~a----~pklII~~~--S~~~~~~d~~~  142 (337)
                      ++..++.+                                           +.+    +++++.+.+  +..+...|++.
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~tg~~~~i~~  164 (377)
T d1vjoa_          85 TIANAVEPGDVVLIGVAGYFGNRLVDMAGRYGADVRTISKPWGEVFSLEELRTALETHRPAILALVHAETSTGARQPLEG  164 (377)
T ss_dssp             HHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTT
T ss_pred             HHHhccccccccceeeechhhhhhhhhhhhhcccccccccCCCCcccchhhhhhhhcCcceeeeeeeeeccceeeechhh
Confidence            88888654                                           001    267777764  33579999999


Q ss_pred             HHHHhhhcCCeEEEeccccccccc------e---eeee-cc-----CC-chhhh--hHHHHHhhc---------------
Q psy10669        143 FRQICDETDSIMFADMSHISGLIA------G---VKGV-TK-----TG-EKILY--DYEEKINNA---------------  189 (337)
Q Consensus       143 l~eia~~~ga~l~vD~AH~~Gli~------g---~~~T-~~-----~G-g~i~~--~l~~~i~~~---------------  189 (337)
                      +.++|+++|+++++|++|++|.+.      +   +.+. +|     .| |++..  +..+...+.               
T Consensus       165 i~~~~~~~g~~~~vDa~~~~g~~~~~~~~~~~d~~~~s~~K~~~gp~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (377)
T d1vjoa_         165 VGELCREFGTLLLVDTVTSLGGVPIFLDAWGVDLAYSCSQKGLGCSPGASPFTMSSRAIEKLQRRRTKVANWYLDMNLLG  244 (377)
T ss_dssp             HHHHHHHHTCEEEEECTTTTTTSCCCTTTTTCSEEECCSSSTTCSCSSCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHH
T ss_pred             hhhhhhhccceEEEecchhhhhhhhcccccccceeeecccccccCCCEEEEecchhhHHhhhhccCCCCcceeeccchhh
Confidence            999999999999999999999887      1   2222 22     22 33322  222211111               


Q ss_pred             ----cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCC-C-CCeEEEEEecCCCcc
Q psy10669        190 ----VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGG-T-DVHLILIDLRKNKLT  263 (337)
Q Consensus       190 ----~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~-t-~~h~v~V~~~~~~~~  263 (337)
                          -.....+++....+.++..+..++.....+...++..++++++.+.|.+.|+.++... . .++++.+.+ .++++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~rs~~v~~~~~-p~~~~  323 (377)
T d1vjoa_         245 KYWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDIGLSLHVEKEYRLPTLTTVCI-PDGVD  323 (377)
T ss_dssp             HHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCSSEEEEEC-CTTCC
T ss_pred             hccCcccccccccceechhhhHHHHhhhhhcCchHHHHHHHHHhhhhhhhhhccCceeecChHhcCCeEEEEEC-CCCCC
Confidence                1123356788888888888888776555678888999999999999999998876521 2 233444444 35678


Q ss_pred             hHHHHHHH-hhcCceeccCc------ccchhh
Q psy10669        264 GSKVELVL-EEIAIACNKNT------GISLAA  288 (337)
Q Consensus       264 ~~~~~~~L-~~~gI~v~~~~------girig~  288 (337)
                      +.++.+.| +++||.+....      .||||+
T Consensus       324 ~~~l~~~L~~~~gI~v~~G~~~~~~~~~Ris~  355 (377)
T d1vjoa_         324 GKAVARRLLNEHNIEVGGGLGELAGKVWRVGL  355 (377)
T ss_dssp             HHHHHHHHHHHHCEECEECCGGGTTTEEEEEC
T ss_pred             HHHHHHHHHhcCCEEEecCcccccCCEEEEec
Confidence            88888776 56899985422      488884

>d1m32a_ c.67.1.3 (A:) 2-aminoethylphosphonate transaminase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: 2-aminoethylphosphonate transaminase
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.48  E-value=3.8e-13  Score=125.25  Aligned_cols=234  Identities=13%  Similarity=0.012  Sum_probs=152.9

Q ss_pred             CCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecC-CCchhHHHHHHhhCCc
Q psy10669         41 FTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPY-SGSPANFAVCEKALPT  119 (337)
Q Consensus        41 ~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~-Sgt~AN~~v~~aLl~~  119 (337)
                      -+++.|++||.....        +.|   + ++..++...+++++++++|+++.+  ..+.++ |||.++.+++.++..+
T Consensus        10 ~~~~~V~~A~~~~~~--------~~~---~-~~~~~~~~~~r~~l~~l~~~~~~~--~~i~~t~s~T~~~~~~~~~l~~~   75 (361)
T d1m32a_          10 TTSRTVKEAMLFDSC--------TWD---D-DYNIGVVEQIRQQLTALATASEGY--TSVLLQGSGSYAVEAVLGSALGP   75 (361)
T ss_dssp             CCCHHHHHTTCCCCC--------TTS---H-HHHTTTHHHHHHHHHHHHCSSSSE--EEEEEESCHHHHHHHHHHHSCCT
T ss_pred             CCCHHHHHHhhhhcc--------CCC---c-HHHHHHHHHHHHHHHHHhCCCCCC--EEEEECCCHHHHHHHHHHHhhhh
Confidence            468999998864211        111   1 122234456889999999997641  125554 5588887778888653


Q ss_pred             -------------------------------------------cc-----ccccEEEEcCcc--cccccChHHHHHHhhh
Q psy10669        120 -------------------------------------------NN-----ARFDFLSSGTTC--YSRCLDYARFRQICDE  149 (337)
Q Consensus       120 -------------------------------------------~~-----a~pklII~~~S~--~~~~~d~~~l~eia~~  149 (337)
                                                                 ..     .+++++.+.+..  .+...|+++|.++|++
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~tG~~~~i~~i~~~~~~  155 (361)
T d1m32a_          76 QDKVLIVSNGAYGARMVEMAGLMGIAHHAYDCGEVARPDVQAIDAILNADPTISHIAMVHSETTTGMLNPIDEVGALAHR  155 (361)
T ss_dssp             TCCEEEEESSHHHHHHHHHHHHHTCCEEEEECCTTSCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECCHHHHHHHHHH
T ss_pred             ccccceeeehhhhhhHHHHhhhhhcccccccccccCCccchhhHHHHHhccCccceEEEeeecccccchhhhhhhhhhcc
Confidence                                                       00     126777776443  5799999999999999


Q ss_pred             cCCeEEEeccccccccc------e---ee-eecc-----CC-chhhh--hHHH-----------------HHhhccCCCC
Q psy10669        150 TDSIMFADMSHISGLIA------G---VK-GVTK-----TG-EKILY--DYEE-----------------KINNAVFPSL  194 (337)
Q Consensus       150 ~ga~l~vD~AH~~Gli~------g---~~-~T~~-----~G-g~i~~--~l~~-----------------~i~~~~~p~~  194 (337)
                      +|++++||++|++|.+.      +   ++ +++|     .| |++..  +..+                 ..........
T Consensus       156 ~g~~~~vDa~qs~G~~~~d~~~~~~D~~~~s~~K~l~gp~G~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (361)
T d1m32a_         156 YGKTYIVDAMSSFGGIPMDIAALHIDYLISSANKCIQGVPGFAFVIAREQKLAACKGHSRSLSLDLYAQWRCMEDNHGKW  235 (361)
T ss_dssp             HTCEEEEECTTTTTTSCCCTTTTTCSEEEEESSSTTCCCSSEEEEEEEHHHHTTCTTCCSCSTTCHHHHHHHHHHTTTCC
T ss_pred             cceeeEeecccccCcccccccccccceEEeeecccccCCCCceEEEechhhhhhhccccccccccchhhhcccccccccc
Confidence            99999999999999998      1   22 3332     33 33321  1111                 1111111223


Q ss_pred             CCCCcHHHHHHHHHHHHHHhchhh-HHHHHHHHHHHHHHHHHHHhCCCEEecCC-CC-CeEEEEEec-CCCcchHHHHHH
Q psy10669        195 QGGPHNHAIGAIATAMLQAQSDEF-KSYQAQVKANASHLSDEMIKRGYHVVTGG-TD-VHLILIDLR-KNKLTGSKVELV  270 (337)
Q Consensus       195 ~g~~~~~~iaala~a~~e~~~~~~-~~y~~~v~~na~~l~~~L~~~G~~v~~~~-t~-~h~v~V~~~-~~~~~~~~~~~~  270 (337)
                      .+|+....+.++..++.+.....+ ....++...+++.+.+.+...|+.+.... .. ++++.+.+. ..+.+..++.+.
T Consensus       236 ~~t~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~rs~~v~~~~~p~~~~~~~~~~~~~  315 (361)
T d1m32a_         236 RFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRALGFNTLLDDELHSPIITAFYSPEDPQYRFSEFYRR  315 (361)
T ss_dssp             SSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCSSEEEEECCCCTTCCHHHHHHH
T ss_pred             CCCCCchhhhHHHHHHHHHHHhcchhhhHHHHHHHHHHHHHHHhhcCCcccCChhhcCCcEEEEECCCCCCCCHHHHHHH
Confidence            568899999999999888765433 45567888889999999999998876521 12 334444442 345678889999


Q ss_pred             HhhcCceecc-----Ccccchhh
Q psy10669        271 LEEIAIACNK-----NTGISLAA  288 (337)
Q Consensus       271 L~~~gI~v~~-----~~girig~  288 (337)
                      |.+.||.+..     ...+|||+
T Consensus       316 l~~~gi~i~~G~~~~~~~~Ris~  338 (361)
T d1m32a_         316 LKEQGFVIYPGKVSQSDCFRIGN  338 (361)
T ss_dssp             HHHTTEECEECCCSSSCEEEEEC
T ss_pred             HHHCCcEEECCCcCCCCEEEEeC
Confidence            9999998753     22689974

>d1ax4a_ c.67.1.2 (A:) Tryptophan indol-lyase (tryptophanase) {Proteus vulgaris [TaxId: 585]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Proteus vulgaris [TaxId: 585]

Probab=99.46  E-value=6.5e-13  Score=128.81  Aligned_cols=207  Identities=14%  Similarity=0.159  Sum_probs=137.6

Q ss_pred             CCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc---------------------
Q psy10669         61 GLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT---------------------  119 (337)
Q Consensus        61 g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~---------------------  119 (337)
                      +..|.+.|+|+..+++||    ++++++||.++     .+.++||+.||.+++.+++++                     
T Consensus        64 ~~~gd~~y~~~~~~~~le----~~~a~l~g~~~-----~~~~~sGt~A~~~a~~~~~~~g~~~~~~~~~~i~~~~h~~t~  134 (465)
T d1ax4a_          64 MITGDEAYAGSRNYYDLK----DKAKELFNYDY-----IIPAHQGRGAENILFPVLLKYKQKEGKAKNPVFISNFHFDTT  134 (465)
T ss_dssp             HHTCCCCSSSCHHHHHHH----HHHHHHHCCCE-----EEEESSHHHHHHHHHHHHHHHHHHTTCCSSCEEEESSCCHHH
T ss_pred             HhhhhhhhccChHHHHHH----HHHHHHHCCCE-----EEECCCcHHHHHHHHHHHHHHHHhcCCCCCeEEeccchhhhh
Confidence            346778899999999999    57789999985     577799999999999998432                     


Q ss_pred             -------------------------------------ccc-------cccEEEEcCccc---ccc---cChHHHHHHhhh
Q psy10669        120 -------------------------------------NNA-------RFDFLSSGTTCY---SRC---LDYARFRQICDE  149 (337)
Q Consensus       120 -------------------------------------~~a-------~pklII~~~S~~---~~~---~d~~~l~eia~~  149 (337)
                                                           +.+       .+.++++..+..   +.+   .+++++++||++
T Consensus       135 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~~~~~  214 (465)
T d1ax4a_         135 AAHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQ  214 (465)
T ss_dssp             HHHHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCeeecccccccCCCCCCCCccCccCHHHHHHHHHhhccccccceeeccccccCceecCCHHHHHHHHHHHHH
Confidence                                                 000       134555554432   233   355677799999


Q ss_pred             cCCeEEEeccccccccc--------------------------eeeeecc------CCchhhh----hHHHHH----hhc
Q psy10669        150 TDSIMFADMSHISGLIA--------------------------GVKGVTK------TGEKILY----DYEEKI----NNA  189 (337)
Q Consensus       150 ~ga~l~vD~AH~~Gli~--------------------------g~~~T~~------~Gg~i~~----~l~~~i----~~~  189 (337)
                      +|++|++|++|..|...                          .++++.+      .||++..    .+.+..    ...
T Consensus       215 ~g~~l~~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~d~~s~s~~k~~~~~~~g~l~~~~~~~~~~~~~~~~~~~  294 (465)
T d1ax4a_         215 HGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDPLLNIGGLVAIRDNEEIFTLARQRCVPM  294 (465)
T ss_dssp             HTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCSEEEEETTSTTCCSSCEEEEESSCHHHHHHHHHHHHHH
T ss_pred             cCCEEEEECcchhhhhcccccccccccccchhhhccccccccceeEeecccCcccccceeEeecchHHHHHhhhcccccc
Confidence            99999999999876542                          1233332      3455543    122221    122


Q ss_pred             cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCC-------Cc
Q psy10669        190 VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKN-------KL  262 (337)
Q Consensus       190 ~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~-------~~  262 (337)
                      ..+..+++.....+++++..+.+..   ..++.++..+++++|++.|.+.|++++. .+..|.+.+++...       ..
T Consensus       295 ~~~~~~~~~~~~~~~a~~~~~~e~~---~~~~~~~~~~~~~~l~~~L~~~g~~~v~-~~~~~~~~~~~~~~~~~~~~~~~  370 (465)
T d1ax4a_         295 EGFVTYGGLAGRDMAAMVQGLEEGT---EEEYLHYRIGQVKYLGDRLREAGIPIQY-PTGGHAVFVDCKKLVPQIPGDQF  370 (465)
T ss_dssp             TCSTTTTTCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHHHHHHHTTCCBCS-SCCSSEEEEESTTTCTTSCGGGC
T ss_pred             ccCCCcchhhHHHHHHHhhhhHHhh---hHHHHHHHHHHHHHHHHHHHhhcCcccc-CCCcceeeeehhhhcCCCccccc
Confidence            2233455566666666666665543   3578888999999999999999999875 47788887775431       11


Q ss_pred             -chHHHHHHHhhcCceecc
Q psy10669        263 -TGSKVELVLEEIAIACNK  280 (337)
Q Consensus       263 -~~~~~~~~L~~~gI~v~~  280 (337)
                       ....+.++|.+.||.+.+
T Consensus       371 ~~~~~~~~ll~~~GI~~~~  389 (465)
T d1ax4a_         371 PAQAVINALYLESGVRAVE  389 (465)
T ss_dssp             HHHHHHHHHHHHHCEECEE
T ss_pred             hhHHHHHHHHHhcCceecc
Confidence             123456667778998754

>d1eg5a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.45  E-value=2.2e-12  Score=121.09  Aligned_cols=236  Identities=16%  Similarity=0.102  Sum_probs=161.0

Q ss_pred             ccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHh
Q psy10669         37 ASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEK  115 (337)
Q Consensus        37 asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~a  115 (337)
                      ++...+|+.|.+++...+.+.|  |+|++.+..+.+..+.+| .+|++++++||+++    -+|.+++| |.++..++.+
T Consensus         8 a~~~~~p~~v~ea~~~~~~~~~--~np~~~~~~~~~~~~~~~-~aR~~ia~l~~~~~----~~i~~~~~~T~~l~~~~~~   80 (376)
T d1eg5a_           8 NATTRVDDRVLEEMIVFYREKY--GNPNSAHGMGIEANLHME-KAREKVAKVLGVSP----SEIFFTSCATESINWILKT   80 (376)
T ss_dssp             TTCCCCCHHHHHHHHHHHHTCC--CCTTCSSHHHHHHHHHHH-HHHHHHHHHHTSCG----GGEEEESCHHHHHHHHHHH
T ss_pred             cccccCCHHHHHHHHHHHHHcC--CCCccccHHHHHHHHHHH-HHHHHHHHHcCCCC----CcEEEECCHHHHHHhhhhc
Confidence            5667789999999998887765  788776555443334444 68999999999987    36888888 5665444443


Q ss_pred             h----CCc------------------------------------------cc---c--cccEEEEcCccc--ccccChHH
Q psy10669        116 A----LPT------------------------------------------NN---A--RFDFLSSGTTCY--SRCLDYAR  142 (337)
Q Consensus       116 L----l~~------------------------------------------~~---a--~pklII~~~S~~--~~~~d~~~  142 (337)
                      +    .++                                          .+   .  ++++|++++.++  +...|+++
T Consensus        81 ~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~v~~vp~~~~~~id~~~l~~~i~~~t~lv~is~v~~~tG~~~~~~~  160 (376)
T d1eg5a_          81 VAETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDSRGVVKLEELEKLVDEDTFLVSIMAANNEVGTIQPVED  160 (376)
T ss_dssp             HHHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCTTSCBCHHHHHHHCCTTEEEEEEESBCTTTCBBCCHHH
T ss_pred             ccccccccCcccccccccchhhHHHHHHHHhcCCEEEEEcCCCCCeECHHHHHHhcCCCceEEEEECCccccceeeeehh
Confidence            2    221                                          00   1  278888885554  57789999


Q ss_pred             HHHHhhhc--CCeEEEeccccccccc---------eeeee-cc----CC-chhhhhHHHHHhhccCC------CCCCCCc
Q psy10669        143 FRQICDET--DSIMFADMSHISGLIA---------GVKGV-TK----TG-EKILYDYEEKINNAVFP------SLQGGPH  199 (337)
Q Consensus       143 l~eia~~~--ga~l~vD~AH~~Gli~---------g~~~T-~~----~G-g~i~~~l~~~i~~~~~p------~~~g~~~  199 (337)
                      +.++++.+  |++++||++|.+|.+.         .++++ +|    .| |++...-...+++...+      ...|.++
T Consensus       161 i~~~~~~~~~~~~~~vD~~q~~g~~~~d~~~~~~D~~~~s~~K~~gp~G~~~l~~~~~~~~~p~~~g~~~~~~~~~~~~~  240 (376)
T d1eg5a_         161 VTRIVKKKNKETLVHVDAVQTIGKIPFSLEKLEVDYASFSAHKFHGPKGVGITYIRKGVPIRPLIHGGGQERGLRSGTQN  240 (376)
T ss_dssp             HHHHHHHHCTTCEEEEECTTTTTTSCCCCTTTCCSEEEEEGGGGTSCTTCEEEEECTTSCCCCSBCSSCTTTTTBCSCCC
T ss_pred             hhhhhhhcccCceeEEEeeeccccccccccccCccceecccceeecCCCceeEEeccCcccCCcccCCCCcccccCCccc
Confidence            99998554  9999999999999998         13333 32    34 33322111122332221      1246677


Q ss_pred             HHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceec
Q psy10669        200 NHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACN  279 (337)
Q Consensus       200 ~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~  279 (337)
                      .+.....+.+.... ...+...........+++.+.|...+..+.......+...+.+...++.+..+...|++.||.++
T Consensus       241 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~vr  319 (376)
T d1eg5a_         241 VPGIVGAARAMEIA-VEELSEAAKHMEKLRSKLVSGLMNLGAHIITPLEISLPNTLSVSFPNIRGSTLQNLLSGYGIYVS  319 (376)
T ss_dssp             HHHHHHHHHHHHHH-HHTHHHHHHHHHHHHHHHHHHHHTTTCEECSCTTSBCTTEEEEECTTCCHHHHHHHHHHTTEECB
T ss_pred             chhhhhHHHHhhcc-ccchhhhhhhhhhhhhhhccccccccccccccccccccceeeeccCCCCHHHHHHHHhhCCeEEe
Confidence            78877777766655 34566777788888888999998887777765455555556666677889999999999999886


Q ss_pred             c
Q psy10669        280 K  280 (337)
Q Consensus       280 ~  280 (337)
                      .
T Consensus       320 ~  320 (376)
T d1eg5a_         320 T  320 (376)
T ss_dssp             C
T ss_pred             C
Confidence            4

>d1mdoa_ c.67.1.4 (A:) Aminotransferase ArnB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Aminotransferase ArnB
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.39  E-value=3.5e-12  Score=119.45  Aligned_cols=218  Identities=14%  Similarity=0.124  Sum_probs=140.0

Q ss_pred             CCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhh-CC
Q psy10669         40 NFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKA-LP  118 (337)
Q Consensus        40 n~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aL-l~  118 (337)
                      .+++++-++++...+.+.         .++....++++|    ++++++||.++     ++.++|||.|+..++.+| ++
T Consensus         8 ~~~~~~~~~~~~~~~~~~---------~~~~G~~v~~~E----~~la~~~g~~~-----ai~~~sgt~Al~~al~al~~~   69 (376)
T d1mdoa_           8 PAMGAEELAAVKTVLDSG---------WITTGPKNQELE----AAFCRLTGNQY-----AVAVSSATAGMHIALMALGIG   69 (376)
T ss_dssp             CCCCHHHHHHHHHHHHHT---------CCSSSHHHHHHH----HHHHHHHCCSE-----EEEESCHHHHHHHHHHHTTCC
T ss_pred             CCCCHHHHHHHHHHHhcC---------CCcCCHHHHHHH----HHHHHHHCcCe-----EEEeCCHHHHHHHHHHHhCCC
Confidence            456677667776665542         122335678888    58899999986     688899999999999998 54


Q ss_pred             c------------------------------------------ccc---cccEEEEcCcccccccChHHHHHHhhhcCCe
Q psy10669        119 T------------------------------------------NNA---RFDFLSSGTTCYSRCLDYARFRQICDETDSI  153 (337)
Q Consensus       119 ~------------------------------------------~~a---~pklII~~~S~~~~~~d~~~l~eia~~~ga~  153 (337)
                      +                                          +.+   ++|+||+.+ .|+...|+.+|.+||+++|++
T Consensus        70 ~gdeVi~~~~~~~~~~~ai~~~g~~pv~~d~~~~~~~~d~~~l~~~i~~~tkaIi~~h-~~G~~~~~~~i~~i~~~~~i~  148 (376)
T d1mdoa_          70 EGDEVITPSMTWVSTLNMIVLLGANPVMVDVDRDTLMVTPEHIEAAITPQTKAIIPVH-YAGAPADLDAIYALGERYGIP  148 (376)
T ss_dssp             TTCEEEEESSSCHHHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCTTEEEECCBC-GGGCCCCHHHHHHHHHHHTCC
T ss_pred             CCCEEEEecccccccccchhccccceeeecccccccCCCHHHHHHhcCCCCeEEEEeC-CCCCccchhHHHHHHHhcCce
Confidence            3                                          111   268888874 899999999999999999999


Q ss_pred             EEEeccccccccc--------e--eeeec--c-----CCchhhh---hHHHHHhhccCCCC-------------------
Q psy10669        154 MFADMSHISGLIA--------G--VKGVT--K-----TGEKILY---DYEEKINNAVFPSL-------------------  194 (337)
Q Consensus       154 l~vD~AH~~Gli~--------g--~~~T~--~-----~Gg~i~~---~l~~~i~~~~~p~~-------------------  194 (337)
                      ||.|+||+.|..-        |  +.|.+  |     .||++++   ++.+++......+.                   
T Consensus       149 vIeD~a~a~g~~~~~~~~g~~g~~~~Sf~~~K~l~~g~GG~i~t~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  228 (376)
T d1mdoa_         149 VIEDAAHATGTSYKGRHIGARGTAIFSFHAIKNITCAEGGIVVTDNPQFADKLRSLKFHGLGVDAWDRQSGGRAPQAEVL  228 (376)
T ss_dssp             BCEECTTCTTCEETTEETTSSSEEEEECCTTSSSCSSSCEEEEESCHHHHHHHHHHTBTTEECC-----------CCEES
T ss_pred             EEeccchhccCeeCCeecccccCccccCCCcCCCCCCCCCEEEEechhHHHHHHhhcccCCcccccccccccccccccch
Confidence            9999999998542        1  12211  2     4788876   35444332211111                   


Q ss_pred             --CCCC-cHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCC-----CCCeEEEEEec--CCCcch
Q psy10669        195 --QGGP-HNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGG-----TDVHLILIDLR--KNKLTG  264 (337)
Q Consensus       195 --~g~~-~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~-----t~~h~v~V~~~--~~~~~~  264 (337)
                        ..+. .....|++  ++.++  ..++++.++-.++++++.+.|.+..+......     ...+..++.+.  ..+.+-
T Consensus       229 ~~g~n~~~~~~~Aai--~~~qL--~~~~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R  304 (376)
T d1mdoa_         229 APGYKYNLPDLNAAI--ALAQL--QKLDALNARRAAIAAQYHQAMADLPFQPLSLPSWEHIHAWHLFIIRVDEARCGITR  304 (376)
T ss_dssp             SCCCBCCCCHHHHHH--HHHHH--HTHHHHHHHHHHHHHHHHHHHHTSSCEECCCCSSCEECCCSCEEEECCHHHHSSCH
T ss_pred             hcccccccchhhhhh--hhhhh--hhhhHHHHHHhhhhhhhhhhcccccccccccccccccccccccccccccccchhhH
Confidence              0111 11233333  23333  34677888999999999999998655433211     11123333332  223344


Q ss_pred             HHHHHHHhhcCceecc
Q psy10669        265 SKVELVLEEIAIACNK  280 (337)
Q Consensus       265 ~~~~~~L~~~gI~v~~  280 (337)
                      .++.+.|.+.||.++.
T Consensus       305 d~l~~~L~~~gI~~~~  320 (376)
T d1mdoa_         305 DALMASLKTKGIGTGL  320 (376)
T ss_dssp             HHHHHHHHHTTBCCBC
T ss_pred             HHHHHHHHHCCCCeee
Confidence            6788899999998763

>d1iuga_ c.67.1.3 (A:) Subgroup IV putative aspartate aminotransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Subgroup IV putative aspartate aminotransferase
species: Thermus thermophilus [TaxId: 274]

Probab=99.37  E-value=2.9e-11  Score=113.45  Aligned_cols=236  Identities=14%  Similarity=0.031  Sum_probs=153.8

Q ss_pred             eeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHH
Q psy10669         35 LIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCE  114 (337)
Q Consensus        35 l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~  114 (337)
                      +.|-=--++|.|++||.....        +   +.+ ....++-..+++.++++|+.++.   +-+...|||.++-+++.
T Consensus         4 ~~PGP~~v~~~V~~am~~~~~--------~---hr~-~~f~~i~~~~~~~l~~ll~~~~~---~i~~~gsgT~a~e~~~~   68 (348)
T d1iuga_           4 LTPGPVRLHPKALEALARPQL--------H---HRT-EAAREVFLKARGLLREAFRTEGE---VLILTGSGTLAMEALVK   68 (348)
T ss_dssp             CSSSSCCCCHHHHHHHHSCCC--------C---TTS-HHHHHHHHHHHHHHHHHHTCSSE---EEEEESCHHHHHHHHHH
T ss_pred             cCCCCCCCCHHHHHHhcCCCC--------C---CCC-HHHHHHHHHHHHHHHHHhCCCCC---EEEEeCchHHHHHHHHH
Confidence            344444569999999975321        1   222 23445666788999999998763   22444555889888888


Q ss_pred             hhCCc-----------------------------------------ccc--cccEEEEc--CcccccccChHHHHHHhhh
Q psy10669        115 KALPT-----------------------------------------NNA--RFDFLSSG--TTCYSRCLDYARFRQICDE  149 (337)
Q Consensus       115 aLl~~-----------------------------------------~~a--~pklII~~--~S~~~~~~d~~~l~eia~~  149 (337)
                      .++.+                                         +.+  +++.+++.  +++.+...|++.+.++|++
T Consensus        69 nl~~~g~~vlv~~~G~f~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~~h~eTstG~~~~i~~i~~~~~~  148 (348)
T d1iuga_          69 NLFAPGERVLVPVYGKFSERFYEIALEAGLVVERLDYPYGDTPRPEDVAKEGYAGLLLVHSETSTGALADLPALARAFKE  148 (348)
T ss_dssp             HHCCTTCEEEEEECSHHHHHHHHHHHHTTCEEEEEECCTTCCCCTTTSCCSSCSEEEEESEETTTTEECCHHHHHHHHHH
T ss_pred             hcccccccceeecchHHHHHHHHHHHhcCcccccccccCCCccccccccccCCCeeEEEecchhhhhhccHHHHHHHHHh
Confidence            88754                                         111  25666665  5667899999999999988


Q ss_pred             c--CCeEEEeccccccccc---------ee-eeec-----cCC-chhh-h-hH-------------HHHHhhccCCCCCC
Q psy10669        150 T--DSIMFADMSHISGLIA---------GV-KGVT-----KTG-EKIL-Y-DY-------------EEKINNAVFPSLQG  196 (337)
Q Consensus       150 ~--ga~l~vD~AH~~Gli~---------g~-~~T~-----~~G-g~i~-~-~l-------------~~~i~~~~~p~~~g  196 (337)
                      +  +++++||+.+++|...         .+ .+.+     |.| |++. . ++             ...++..-......
T Consensus       149 ~~~~~l~~vDavss~g~~~i~~d~~~iD~~~~~sqK~l~gppG~~~v~~s~~~le~~~~~~~~~dl~~~~~~~~~~~~~~  228 (348)
T d1iuga_         149 KNPEGLVGADMVTSLLVGEVALEAMGVDAAASGSQKGLMCPPGLGFVALSPRALERLKPRGYYLDLARELKAQKEGESAW  228 (348)
T ss_dssp             HCTTCEEEEECTTTBTTBCCCSGGGTCSEEEEESSSTTCCCSCEEEEEECHHHHHTCCCCSSTTCHHHHHHHHTTTCCSS
T ss_pred             hhccceeechhhhcccccccccccccCCEEEeccccceecCCceeeeeechHHHhhhcccccccchhhhhhhhccCcccc
Confidence            7  4889999999999876         12 2332     234 4442 1 22             22222221223346


Q ss_pred             CCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeE-EEEEecCCCcchHHHHHHHhhcC
Q psy10669        197 GPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHL-ILIDLRKNKLTGSKVELVLEEIA  275 (337)
Q Consensus       197 ~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~-v~V~~~~~~~~~~~~~~~L~~~g  275 (337)
                      ||+.+.+.++..+++++.+ ++.++.+.-....+.+++.+.+.|+++... ..++. +.+.+ +.+++..++.+.|.++|
T Consensus       229 Tp~v~~i~~l~~aL~~~~~-~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~-~~s~~v~~~~~-P~g~~~~~~~~~l~~~g  305 (348)
T d1iuga_         229 TPAINLVLAVAAVLEEVLP-RLEEHLALKAWQNALLYGVGEEGGLRPVPK-RFSPAVAAFYL-PEGVPYARVKEAFAQRG  305 (348)
T ss_dssp             CCCHHHHHHHHHHHHHHGG-GHHHHHHHHHHHHHHHHHHHHHTTCEESCS-SBCTTCEEEEC-CTTCCHHHHHHHHHTTT
T ss_pred             cccchHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHhhhhhhhhhccChh-hcCCeEEEEEC-CCCCCHHHHHHHHHHCC
Confidence            9999999999999999864 455554433333445556666789998753 23443 33333 45788999999999999


Q ss_pred             ceeccCc------ccchhh
Q psy10669        276 IACNKNT------GISLAA  288 (337)
Q Consensus       276 I~v~~~~------girig~  288 (337)
                      |.+..-.      -+|||+
T Consensus       306 i~i~~G~~~l~~~~~RIg~  324 (348)
T d1iuga_         306 AVIAGGQGPLKGKVFRLSL  324 (348)
T ss_dssp             EECEECCGGGTTTEEEECC
T ss_pred             eEEEcCccccCCCEEEEeC
Confidence            9886533      388874

>d1svva_ c.67.1.1 (A:) Low-specificity threonine aldolase {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Leishmania major [TaxId: 5664]

Probab=99.35  E-value=1.4e-12  Score=116.30  Aligned_cols=231  Identities=12%  Similarity=0.081  Sum_probs=132.8

Q ss_pred             ccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHH
Q psy10669         37 ASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVC  113 (337)
Q Consensus        37 asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~  113 (337)
                      +++|..  ||.|++|+... ...+..|+       |.   +++...+|+++++++|+++    ..|.|+|| |.||..++
T Consensus         5 ~nd~~~g~~P~v~eAl~~~-~~~~~~~y-------~~---~~~~~~lr~~ia~~~g~~~----~~v~~tsggtean~~a~   69 (340)
T d1svva_           5 VNDYSVGMHPKILDLMARD-NMTQHAGY-------GQ---DSHCAKAARLIGELLERPD----ADVHFISGGTQTNLIAC   69 (340)
T ss_dssp             SCSCSSCCCHHHHHHHHHH-TTCCCCST-------TC---SHHHHHHHHHHHHHHTCTT----SEEEEESCHHHHHHHHH
T ss_pred             ccCCCCCCCHHHHHHHHHH-hhcCCCCC-------CC---CHHHHHHHHHHHHHhCCCc----ceEEEcCCHHHHHHHHH
Confidence            445554  89999999764 22222221       11   3344456789999999987    47888765 89999998


Q ss_pred             HhhCCc------------------------------------------------ccc--c--ccEEEEc-CcccccccCh
Q psy10669        114 EKALPT------------------------------------------------NNA--R--FDFLSSG-TTCYSRCLDY  140 (337)
Q Consensus       114 ~aLl~~------------------------------------------------~~a--~--pklII~~-~S~~~~~~d~  140 (337)
                      .+++++                                                ...  .  +.++++. .++.+...+.
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (340)
T d1svva_          70 SLALRPWEAVIATQLGHISTHETGAIEATGHKVVTAPCPDGKLRVADIESALHENRSEHMVIPKLVYISNTTEVGTQYTK  149 (340)
T ss_dssp             HHHCCTTEEEEEETTSHHHHSSTTHHHHTTCCEEEECCTTSCCCHHHHHHHHHHSCSTTSCEEEEEEEESSCTTSCCCCH
T ss_pred             HHHhhhccccccccccceeeeecccccccceeeeecccccccccchhHHHHhhhhhcccCCcceeeeecccccccccccH
Confidence            998654                                                001  1  3344444 3344555554


Q ss_pred             HH---HHHHhhhcCCeEEEeccccccccce----------------eeeeccCCchh------hh--hHHHHHhhccCCC
Q psy10669        141 AR---FRQICDETDSIMFADMSHISGLIAG----------------VKGVTKTGEKI------LY--DYEEKINNAVFPS  193 (337)
Q Consensus       141 ~~---l~eia~~~ga~l~vD~AH~~Gli~g----------------~~~T~~~Gg~i------~~--~l~~~i~~~~~p~  193 (337)
                      .+   +.++|+++|+++++|++|..+.+..                ...++.+|+..      ..  .............
T Consensus       150 ~~~~~~~~~~~~~g~~~~~d~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (340)
T d1svva_         150 QELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKAGGMFGEALIILNDALKPNARHLIKQR  229 (340)
T ss_dssp             HHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCSEEEEECTTTTCSSCEEEEECSGGGCTTHHHHHHHT
T ss_pred             HHhhhhhcccccccceeeeeccceeeeecccccccccccccccceeeecCCccccccccccccccchhhhhhhhhhcccc
Confidence            44   5578899999999999998766661                11111222111      11  1111111110011


Q ss_pred             CCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhh
Q psy10669        194 LQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEE  273 (337)
Q Consensus       194 ~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~  273 (337)
                       .++..... ++.+.+...+....+..+.++..++++++...|.+.|+++.. +++++++.+++.     ...+++++++
T Consensus       230 -~~~~~~~~-~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~-p~~~~~v~~~~~-----~~~~~~l~~~  301 (340)
T d1svva_         230 -GALMAKGW-LLGIQFEVLMKDNLFFELGAHSNKMAAILKAGLEACGIRLAW-PSASNQLFPILE-----NTMIAELNND  301 (340)
T ss_dssp             -TCCCTTTH-HHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCBSS-CCSSSEECBEEE-----HHHHHHHTTT
T ss_pred             -cCccchhh-HHHHHHHHHhhhhHHHHHHHHHHHHHhhhHHHHhcCCCeeec-CCCceEEEEeCC-----HHHHHHHHHh
Confidence             11122122 222222222323556788999999999999999999999874 366777777653     3444444544


Q ss_pred             ---cCceeccCc--ccchhhhh
Q psy10669        274 ---IAIACNKNT--GISLAAEI  290 (337)
Q Consensus       274 ---~gI~v~~~~--girig~~~  290 (337)
                         .++.+....  .|||++..
T Consensus       302 ~~~~~~~~~~~~~~~vR~s~~~  323 (340)
T d1svva_         302 FDMYTVEPLKDGTCIMRLCTSW  323 (340)
T ss_dssp             EECEEEEEETTTEEEEEEECCT
T ss_pred             hhhhcccccCCCCcEEEEECCC
Confidence               244444332  78886543

>d1qz9a_ c.67.1.3 (A:) Kynureninase {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Kynureninase
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.34  E-value=1.2e-11  Score=116.76  Aligned_cols=245  Identities=12%  Similarity=0.085  Sum_probs=150.2

Q ss_pred             eccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHH
Q psy10669         36 IASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCE  114 (337)
Q Consensus        36 ~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~  114 (337)
                      .+|.-.+|..|.+++...+.+.+  +++..+...+... .++.+.+|+++++++|++++    ++.|+++ |.++..++.
T Consensus        33 ~as~g~~p~~v~~a~~~~l~~~~--~~~~~~~~~~~~~-~~~~e~~R~~iA~llga~~~----ei~~~~~~T~~~~~~~~  105 (404)
T d1qz9a_          33 GNSLGARPVAALARAQAVIAEEW--GNGLIRSWNSAGW-RDLSERLGNRLATLIGARDG----EVVVTDTTSINLFKVLS  105 (404)
T ss_dssp             TTTSCCCBTTHHHHHHHHHHTCC--CCCGGGHHHHTSG-GGHHHHHHHHHHTTTTCCTT----SEEECSCHHHHHHHHHH
T ss_pred             CcccccCCHHHHHHHHHHHHHHh--cccCcccccchhH-HHHHHHHHHHHHHHhCCCCC----cEEEecCchHHHHHHhh
Confidence            35555569999999988776654  3333222222222 23455789999999999985    5666666 666544443


Q ss_pred             hhC------Cc-----------------------------------------ccc---cccEEEEcCccc--ccccChHH
Q psy10669        115 KAL------PT-----------------------------------------NNA---RFDFLSSGTTCY--SRCLDYAR  142 (337)
Q Consensus       115 aLl------~~-----------------------------------------~~a---~pklII~~~S~~--~~~~d~~~  142 (337)
                      +.+      ++                                         +.+   ++++|++.+.++  +...|+++
T Consensus       106 ~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~T~lV~i~~v~~~tG~~~pv~~  185 (404)
T d1qz9a_         106 AALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDSPEELPQAIDQDTAVVMLTHVNYKTGYMHDMQA  185 (404)
T ss_dssp             HHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESSGGGHHHHCSTTEEEEEEESBCTTTCBBCCHHH
T ss_pred             hhhhhhcccCCCcEEEEeccccchHHHHHHhhhheeeeeceeccccccchhHHHhcCCCceEEEEecccccccceecHHH
Confidence            221      10                                         101   268888885443  79999999


Q ss_pred             HHHHhhhcCCeEEEeccccccccce---------ee-eecc-----CC--chhhh--hHHHHHhhc--------------
Q psy10669        143 FRQICDETDSIMFADMSHISGLIAG---------VK-GVTK-----TG--EKILY--DYEEKINNA--------------  189 (337)
Q Consensus       143 l~eia~~~ga~l~vD~AH~~Gli~g---------~~-~T~~-----~G--g~i~~--~l~~~i~~~--------------  189 (337)
                      |.++|+++|+.++||++|.+|.+..         +. +.+|     .|  |++..  .+.+.+.+.              
T Consensus       186 i~~~~~~~~~~~~vD~~q~~g~~~~~~~~~~~d~~~~s~~K~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (404)
T d1qz9a_         186 LTALSHECGALAIWDLAHSAGAVPVDLHQAGADYAIGCTYKYLNGGPGSQAFVWVSPQLCDLVPQPLSGWFGHSRQFAME  265 (404)
T ss_dssp             HHHHHHHHTCEEEEECTTTTTTSCCCHHHHTCSEEEECSSSTTCCCTTCCCEEEECTTTTTTSCCSCCCGGGBCTTSCCC
T ss_pred             HhccccccccceeEEeeccccccccccccccceEEEEechhhcccCCceEEEEEechhhhhhCCccccccCCcccccccc
Confidence            9999999999999999999999981         22 2232     12  33221  121111100              


Q ss_pred             --------cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHH---H-HhCCCEEecC-CCCCeEEEEE
Q psy10669        190 --------VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDE---M-IKRGYHVVTG-GTDVHLILID  256 (337)
Q Consensus       190 --------~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~---L-~~~G~~v~~~-~t~~h~v~V~  256 (337)
                              ......+++.....+.+..++....+......+++...+.+.+...   + ...|++++++ ..+.+-..|.
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~~i~~p~~~~~r~~~vs  345 (404)
T d1qz9a_         266 PRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTDLFIELVEQRCAAHELTLVTPREHAKRGSHVS  345 (404)
T ss_dssp             SSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHTTSCCEECSCSSGGGBCSEEE
T ss_pred             ccccccccchhhhhhhccchhHHHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHhhccCCCEEEECCCCccceeeEEE
Confidence                    0011247888888888888887776544444444444444444333   3 2379999863 2333333455


Q ss_pred             ecCCCcchHHHHHHHhhcCceecc--Ccccchhhh
Q psy10669        257 LRKNKLTGSKVELVLEEIAIACNK--NTGISLAAE  289 (337)
Q Consensus       257 ~~~~~~~~~~~~~~L~~~gI~v~~--~~girig~~  289 (337)
                      +...  ++.++.+.|.+.||.+..  ..+|||+..
T Consensus       346 f~~~--~~~~v~~~L~~~gi~~~~r~~~~lRiS~~  378 (404)
T d1qz9a_         346 FEHP--EGYAVIQALIDRGVIGDYREPRIMRFGFT  378 (404)
T ss_dssp             EECT--THHHHHHHHHTTTEECEEETTTEEEEECC
T ss_pred             EecC--CHHHHHHHHHHCCCEEeecCCCeEEEECC
Confidence            5543  478889999999998742  236899853

>d2bkwa1 c.67.1.3 (A:3-384) Alanine-glyoxylate aminotransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.32  E-value=9.5e-12  Score=116.83  Aligned_cols=234  Identities=14%  Similarity=0.097  Sum_probs=148.2

Q ss_pred             eeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCC----CCCCCcceeec-CCCchhH
Q psy10669         35 LIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNL----DPEQWGCNVQP-YSGSPAN  109 (337)
Q Consensus        35 l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~----~~~~~~~~v~~-~Sgt~AN  109 (337)
                      |.|-=--+++.|++||...     .   .+.|   +. ...++-..+++.++++|+.    ++    ..+.| .|||.++
T Consensus         7 ~~PGP~~v~~~V~~Am~~~-----~---~~hr---~~-~f~~~~~~~~~~~r~~~~~~~~~~~----~~i~~t~sgT~a~   70 (382)
T d2bkwa1           7 LIPGPIILSGAVQKALDVP-----S---LGHT---SP-EFVSIFQRVLKNTRAVFKSAAASKS----QPFVLAGSGTLGW   70 (382)
T ss_dssp             CSSSSCCCCHHHHHTTSCC-----C---CCTT---SH-HHHHHHHHHHHHHHHHTTCCGGGTC----EEEEEESCTTHHH
T ss_pred             cCCCCCCCCHHHHHHhCcc-----c---CCCC---cH-HHHHHHHHHHHHHHHHHhhhcCCCC----eEEEEeCcHHHHH
Confidence            3343445689999988531     1   1222   22 2333444556677777774    33    24666 4558898


Q ss_pred             HHHHHhhCCc-----------------------------------------------ccc----cccEEEEcC--ccccc
Q psy10669        110 FAVCEKALPT-----------------------------------------------NNA----RFDFLSSGT--TCYSR  136 (337)
Q Consensus       110 ~~v~~aLl~~-----------------------------------------------~~a----~pklII~~~--S~~~~  136 (337)
                      .+++.+|+.+                                               +.+    +++++.+.+  ++.+.
T Consensus        71 ~~~~~~l~~~~~~gd~vlv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~tg~  150 (382)
T d2bkwa1          71 DIFASNFILSKAPNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPLKIGESVPLELITEKLSQNSYGAVTVTHVDTSTAV  150 (382)
T ss_dssp             HHHHHHHSCTTCSCCEEEEECSSHHHHHHHHHHHHTTCEEEEECCSSTTSCCCHHHHHHHHHHSCCSEEEEESEETTTTE
T ss_pred             HHHHHHHHHhcCCCCceEEEEechhhhhhhhhccccccccccccccCCCCccchhHHHHHhhhccchheeeeeccccccc
Confidence            8888998632                                               001    267777763  34578


Q ss_pred             ccChHHHHHHhhhc--CCeEEEeccccccccc------e---eeeec------cCC-chhh-h-hHHHHHh---------
Q psy10669        137 CLDYARFRQICDET--DSIMFADMSHISGLIA------G---VKGVT------KTG-EKIL-Y-DYEEKIN---------  187 (337)
Q Consensus       137 ~~d~~~l~eia~~~--ga~l~vD~AH~~Gli~------g---~~~T~------~~G-g~i~-~-~l~~~i~---------  187 (337)
                      ..|++.+.++|+++  +++++||++|++|.+.      +   ++++.      |.| |++. . ++.+.+.         
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~vDa~qs~g~~pid~~~~giD~~~~s~~K~l~gP~G~g~l~vs~~~~~~~~~~~~~~~~~  230 (382)
T d2bkwa1         151 LSDLKAISQAIKQTSPETFFVVDAVCSIGCEEFEFDEWGVDFALTASQKAIGAPAGLSISLCSSRFMDYALNDSKNGHVH  230 (382)
T ss_dssp             ECCHHHHHHHHHHHCTTSEEEEECTTTTTTSCCCTTTTTCSEEEEESSSTTCCCSCEEEEEECHHHHHHHTCHHHHCCCS
T ss_pred             cccchhhhhhccccccceeeeeecccccccccccccccCeeEEeecccccCcCCCchhhhhccHHHHhhhhhcccCCCcc
Confidence            99999999988766  5999999999999998      2   33333      234 4443 2 2222111         


Q ss_pred             --------------h--ccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-CCCEEecC---C
Q psy10669        188 --------------N--AVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-RGYHVVTG---G  247 (337)
Q Consensus       188 --------------~--~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~G~~v~~~---~  247 (337)
                                    .  .......+||+.+.++++..+++++.+.......++..++++++++.+.+ .++.....   .
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~aL~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~  310 (382)
T d2bkwa1         231 GYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNGLQLTSVSRYPSN  310 (382)
T ss_dssp             CSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTTCCEESSCSSST
T ss_pred             cchhhhhhhhhhhhcccccccccccCCcHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhhhcccccccccCchh
Confidence                          0  01112357999999999999999997666677777777889999988876 35555432   1


Q ss_pred             CCCe-EEEEEecCCCcchHHHHHHHhhcCceeccCc-------ccchhh
Q psy10669        248 TDVH-LILIDLRKNKLTGSKVELVLEEIAIACNKNT-------GISLAA  288 (337)
Q Consensus       248 t~~h-~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~-------girig~  288 (337)
                      ..++ ++.+.+.    ++.++.+.|+++||.+..-.       -+|||+
T Consensus       311 ~~s~~v~~~~~~----~~~~~~~~L~~~gi~i~~G~~~~~~~~~~Ri~~  355 (382)
T d2bkwa1         311 MSAHGLTAVYVA----DPPDVIAFLKSHGVVIAGGIHKDIGPKYIRIGH  355 (382)
T ss_dssp             TBCSSCEEEECS----CHHHHHHHHHHTTEECBCCCCTTTGGGEEEECC
T ss_pred             ccCCcEEEEcCC----CHHHHHHHHHHCCeEEECCCChhhcCCEEEEeC
Confidence            2233 3333332    57788999999999986532       488883

>d2ch1a1 c.67.1.3 (A:2-389) 3-hydroxykynurenine transaminase {Malaria mosquito (Anopheles gambiae) [TaxId: 7165]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: 3-hydroxykynurenine transaminase
species: Malaria mosquito (Anopheles gambiae) [TaxId: 7165]

Probab=99.30  E-value=1.4e-10  Score=108.56  Aligned_cols=240  Identities=14%  Similarity=0.048  Sum_probs=155.1

Q ss_pred             eeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecC-CCchhHHH
Q psy10669         33 IELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPY-SGSPANFA  111 (337)
Q Consensus        33 i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~-Sgt~AN~~  111 (337)
                      +-+.|-=--++|.|++||....        .+   +.+ ....++-..+++.++++||++..   ..+.++ |||.++.+
T Consensus        19 ~l~~PGP~~~~~~V~~Am~~~~--------~~---hr~-~ef~~i~~~~r~~L~~ll~~~~~---~~i~~~gsgT~a~ea   83 (388)
T d2ch1a1          19 IMMGPGPSNCSKRVLTAMTNTV--------LS---NFH-AELFRTMDEVKDGLRYIFQTENR---ATMCVSGSAHAGMEA   83 (388)
T ss_dssp             BCCSSSSCCCCHHHHHHTTSCC--------CC---TTC-HHHHHHHHHHHHHHHHHHTCCCS---CEEEESSCHHHHHHH
T ss_pred             eeeeCCCCCCCHHHHHHhCcCC--------CC---CCC-HHHHHHHHHHHHHHHHHhCCCCC---eEEEEcCcHHHHHHH
Confidence            4455555556999999985321        12   223 33445666789999999999753   246555 44889888


Q ss_pred             HHHhhCCc-------------------------------------------ccc----cccEEEEc--CcccccccChHH
Q psy10669        112 VCEKALPT-------------------------------------------NNA----RFDFLSSG--TTCYSRCLDYAR  142 (337)
Q Consensus       112 v~~aLl~~-------------------------------------------~~a----~pklII~~--~S~~~~~~d~~~  142 (337)
                      ++.+++.+                                           +.+    +++++.+.  .++.+...|++.
T Consensus        84 ~~~~l~~~~~~vl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~t~tG~~~~~~~  163 (388)
T d2ch1a1          84 MLSNLLEEGDRVLIAVNGIWAERAVEMSERYGADVRTIEGPPDRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQPLEG  163 (388)
T ss_dssp             HHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTT
T ss_pred             HHHHhccccccccccccccccccchhhhhhhcccccccccccccccchhhhhhhhccCCcceeeeeecccccccccchhh
Confidence            89999754                                           001    26777776  344579999999


Q ss_pred             HHHHhhhcCCeEEEeccccccccc---------eee-eecc-----CC-chhhh--hHHHHH------------------
Q psy10669        143 FRQICDETDSIMFADMSHISGLIA---------GVK-GVTK-----TG-EKILY--DYEEKI------------------  186 (337)
Q Consensus       143 l~eia~~~ga~l~vD~AH~~Gli~---------g~~-~T~~-----~G-g~i~~--~l~~~i------------------  186 (337)
                      +.++|+++|++++||++|++|.+.         .+. +.+|     .| |++..  +..+..                  
T Consensus       164 i~~~~~~~~~~~~vD~~ss~g~~pid~~~~~~d~~~~s~~K~~~gp~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (388)
T d2ch1a1         164 VGQICHQHDCLLIVDAVASLCGVPFYMDKWEIDAVYTGAQKVLGAPPGITPISISPKALDVIRNRRTKSKVFYWDLLLLG  243 (388)
T ss_dssp             HHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCCEEECCCC-CCCCCSSCEEEEECHHHHHHHHTCSSCCSCGGGCHHHHH
T ss_pred             hcchhccccceeeeeeeecccccccchhccCceEEEEccccccCCCCeEEEEeccHHHHHhhhcccCccccccccchhhh
Confidence            999999999999999999999887         122 2222     23 33321  111110                  


Q ss_pred             hh----ccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCC---CCCeEEEEEecC
Q psy10669        187 NN----AVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGG---TDVHLILIDLRK  259 (337)
Q Consensus       187 ~~----~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~---t~~h~v~V~~~~  259 (337)
                      ..    .-.+...+++..+.+.++..++.++.........++..+....+...+...++.+....   .-+.++.+.+. 
T Consensus       244 ~~~~~~~~~~~~~~t~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rs~~v~~~~~p-  322 (388)
T d2ch1a1         244 NYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGKMGLDIFVKDPRHRLPTVTGIMIP-  322 (388)
T ss_dssp             HHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCBSSCSGGGBCTTEEEEECC-
T ss_pred             hhhcccccccccCccchHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhcccccccCCHHHhCCeEEEEECC-
Confidence            10    01223457899999999999998886545556666666677777777777666554311   11234445443 


Q ss_pred             CCcchHHHHHHH-hhcCceeccCc------ccchhh
Q psy10669        260 NKLTGSKVELVL-EEIAIACNKNT------GISLAA  288 (337)
Q Consensus       260 ~~~~~~~~~~~L-~~~gI~v~~~~------girig~  288 (337)
                      +++++.++.+.| +++||.+..-.      .+|||.
T Consensus       323 ~g~~~~~l~~~l~~~~gI~v~~G~~~~~~~~~RIs~  358 (388)
T d2ch1a1         323 KGVDWWKVSQYAMNNFSLEVQGGLGPTFGKAWRVGI  358 (388)
T ss_dssp             TTCCHHHHHHHHHHHHCBCCBCCCGGGTTTEEEEEC
T ss_pred             CCCCHHHHHHHHhhcCCEEEeCCCccccCCEEEEcC
Confidence            467888887776 56799886422      479883

>d1pmma_ c.67.1.6 (A:) Glutamate decarboxylase beta, GadB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: Glutamate decarboxylase beta, GadB
species: Escherichia coli [TaxId: 562]

Probab=99.28  E-value=1.8e-10  Score=111.73  Aligned_cols=257  Identities=11%  Similarity=0.030  Sum_probs=160.5

Q ss_pred             HHHHHHHHHHhhcccc-eeeecc-CCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCC
Q psy10669         17 ELYSLIKKEKHRQING-IELIAS-ENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPE   94 (337)
Q Consensus        17 ~~~~~~~~e~~rq~~~-i~l~as-en~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~   94 (337)
                      +.+++|.+|.....+. +||..- +-+++|.+.+.+...+...+.    .   +.-.....++|..+.+-++++||++.+
T Consensus        39 ~~~~~i~d~l~~dg~~~~n~asf~~t~~~~~~~~l~~~~~~~N~~----~---~~~~P~~~~lE~~~v~~la~L~~~p~~  111 (450)
T d1pmma_          39 VAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINKNWI----D---KEEYPQSAAIDLRCVNMVADLWHAPAP  111 (450)
T ss_dssp             HHHHHHHHHGGGSCCGGGBCSCCSCCCCCHHHHHHHHHTTTCBTT----C---TTTSHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred             HHHHHHHHHhccCCCccccccccccCCCCHHHHHHHHHHHhcCCC----C---cccCccHHHHHHHHHHHHHHHhCCCcc
Confidence            4789999887766653 454332 457799999988776554321    1   111233468999999999999998654


Q ss_pred             CCcc--eeecCCCchhHHHHHHhhC-----------C----c-------------------------------------c
Q psy10669         95 QWGC--NVQPYSGSPANFAVCEKAL-----------P----T-------------------------------------N  120 (337)
Q Consensus        95 ~~~~--~v~~~Sgt~AN~~v~~aLl-----------~----~-------------------------------------~  120 (337)
                      .++.  -+..++||.||+..+.+.-           .    +                                     .
T Consensus       112 ~~~~~~G~~t~GgSeA~~~a~~aar~~~~~~~~~~g~~~~~~~~~~~~~H~s~~Kaa~~~gi~~~~v~~~~~~~~~d~~~  191 (450)
T d1pmma_         112 KNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGPVQICWHKFARYWDVELREIPMRPGQLFMDPKR  191 (450)
T ss_dssp             TTSCCSEEEESSHHHHHHHHHHHHHHHHHHHHHHHTCCCSCCEEEESSCCHHHHHHHHHTTCEEEECCCBTTBCSCCHHH
T ss_pred             ccCCCcCeeeCchHHHHHHHHHHHHHHHHHHhhhcCCCCCCceEEecccHHHHHHHHHHcCCCceEeeecCCCCcCcHHH
Confidence            3211  2333444888876555531           0    0                                     0


Q ss_pred             c--c---cccEEEEcC-cc-cccccChHHHHHH------hhhcCCeEEEeccccccccc-------------e---eeee
Q psy10669        121 N--A---RFDFLSSGT-TC-YSRCLDYARFRQI------CDETDSIMFADMSHISGLIA-------------G---VKGV  171 (337)
Q Consensus       121 ~--a---~pklII~~~-S~-~~~~~d~~~l~ei------a~~~ga~l~vD~AH~~Gli~-------------g---~~~T  171 (337)
                      +  +   +|.+|++.. +. .+..-|++.+.+|      |+++|++++||+|++.|.++             +   ++..
T Consensus       192 L~~~i~~~t~~Vv~t~gtt~tG~~dpv~~i~~i~~~~~~a~~~~i~lHVDAA~gG~~~p~~~~~~~~~~~~~~aDSi~~s  271 (450)
T d1pmma_         192 MIEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISAS  271 (450)
T ss_dssp             HHHHCCTTEEEEECBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEE
T ss_pred             HHHHhhhCceEEEeeeeeccCCCccccchhhHHHHHHHHHhccCcEEEeehhhccceeeeechhhhhhhcccceeEeecC
Confidence            0  1   166777663 33 3577778777766      45689999999999887664             1   2222


Q ss_pred             ccC------C-chhhh-h--H-HHH-------Hhh-ccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHH
Q psy10669        172 TKT------G-EKILY-D--Y-EEK-------INN-AVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHL  232 (337)
Q Consensus       172 ~~~------G-g~i~~-~--l-~~~-------i~~-~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l  232 (337)
                      +||      | |+++. +  + ...       +.. ...+.+.++-....++++...++.+....|+++.++..+++++|
T Consensus       272 ~HK~~~~p~g~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~~~~~~l~~~G~~G~~~~~~~~~~la~~l  351 (450)
T d1pmma_         272 GHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYL  351 (450)
T ss_dssp             TTTTTCCCSSCEEEEESSGGGSCGGGCEEEEETTEEEEECCSCCSCBSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhccCCCCCeeEEEecChhhhhhhcccccCcCCCCcCCCcccCccchHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH
Confidence            333      3 44433 1  1 111       000 00123344445566666777777777778999999999999999


Q ss_pred             HHHHHhC-CCEEec-CCCCCeEEEEEec--C---CCcchHHHHHHHhhcCceecc
Q psy10669        233 SDEMIKR-GYHVVT-GGTDVHLILIDLR--K---NKLTGSKVELVLEEIAIACNK  280 (337)
Q Consensus       233 ~~~L~~~-G~~v~~-~~t~~h~v~V~~~--~---~~~~~~~~~~~L~~~gI~v~~  280 (337)
                      ++.|.+. +++++. +..+.++..|.++  +   .+++..++.++|.+.|+.++.
T Consensus       352 ~~~L~~~~~~el~~~~~p~~~l~~V~Fr~~~~~~~~~~~~~l~~~L~~~Gw~v~~  406 (450)
T d1pmma_         352 ADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPA  406 (450)
T ss_dssp             HHHHHTTSCEEEEEECCTTTBSSEEEEEECTTCCCSSCHHHHHHHHHTTTCBCCE
T ss_pred             HHHHHhCCCeEEEeCCCCCCceEEEEEecCCcccCCCCHHHHHHHHHHcCCeeec
Confidence            9999985 588876 2223444344443  2   456777899999999988753

>d2fnua1 c.67.1.4 (A:2-372) Spore coat polysaccharide biosynthesis protein C {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Spore coat polysaccharide biosynthesis protein C
species: Helicobacter pylori [TaxId: 210]

Probab=99.17  E-value=6.1e-10  Score=104.45  Aligned_cols=265  Identities=12%  Similarity=0.070  Sum_probs=159.6

Q ss_pred             CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCC---
Q psy10669         42 TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALP---  118 (337)
Q Consensus        42 ~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~---  118 (337)
                      ++++-++++...+.+.         .++....++++|    ++++++||.++     ++.++|||.|+..++.++--   
T Consensus        10 ~~~~~~~~v~~~l~~~---------~~~~G~~v~~fE----~~~~~~~g~k~-----ai~~~Sgt~Al~~al~al~~~~~   71 (371)
T d2fnua1          10 LDKEDKKAVLEVLNSK---------QLTQGKRSLLFE----EALCEFLGVKH-----ALVFNSATSALLTLYRNFSEFSA   71 (371)
T ss_dssp             CCHHHHHHHHHHHTSS---------CCSSSHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHHHSSCCCT
T ss_pred             CCHHHHHHHHHHHcCC---------CccCCHHHHHHH----HHHHHHHCcCe-----EEEEecHHHHHHHHHHHhcccCC
Confidence            4455556666554332         233336788999    57899999997     68899999999999998731   


Q ss_pred             c-----------------------------------------ccc---cccEEEEcCcccccccChHHHHHHhhhcCCeE
Q psy10669        119 T-----------------------------------------NNA---RFDFLSSGTTCYSRCLDYARFRQICDETDSIM  154 (337)
Q Consensus       119 ~-----------------------------------------~~a---~pklII~~~S~~~~~~d~~~l~eia~~~ga~l  154 (337)
                      +                                         +.+   +++.|++.+ .|+...|+.++.++|+++|.++
T Consensus        72 ~~~eVi~p~~t~~a~~~ai~~~G~~pv~vDi~~~~~~~~~~~~~~~~~~t~avi~vh-~~G~~~~~~~i~~~~~~~~i~l  150 (371)
T d2fnua1          72 DRNEIITTPISFVATANMLLESGYTPVFAGIKNDGNIDELALEKLINERTKAIVSVD-YAGKSVEVESVQKLCKKHSLSF  150 (371)
T ss_dssp             TSCEEEECSSSCTHHHHHHHHTTCEEEECCBCTTSSBCGGGSGGGCCTTEEEEEEEC-GGGCCCCHHHHHHHHHHHTCEE
T ss_pred             CCCeeecccccccccceeeeccCcccccccccccccccchhhhhhccchhhcccccc-ccccccccccccccccccchhh
Confidence            0                                         111   267888764 8999999999999999999999


Q ss_pred             EEeccccccccc-----------eeeeec--c-----CCchhhh---hHHHHHhhccCCC-------------CCCCCcH
Q psy10669        155 FADMSHISGLIA-----------GVKGVT--K-----TGEKILY---DYEEKINNAVFPS-------------LQGGPHN  200 (337)
Q Consensus       155 ~vD~AH~~Gli~-----------g~~~T~--~-----~Gg~i~~---~l~~~i~~~~~p~-------------~~g~~~~  200 (337)
                      +-|+||+.|.--           ++.|.+  |     .||++++   ++.+++.....-+             ...+..+
T Consensus       151 IEDaaqa~Ga~~~~~~~G~~g~~~~~Sf~~~K~l~~g~GG~i~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~G~n~r~  230 (371)
T d2fnua1         151 LSDSSHALGSEYQNKKVGGFALASVFSFHAIKPITTAEGGAVVTNDSELHEKMKLFRSHGMLKKDFFEGEVKSIGHNFRL  230 (371)
T ss_dssp             EEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHTBTTEEESSSSCEEESSCCCBCCC
T ss_pred             ccchhhccCceeccccCCccccccccccccccccccccceEEEeechhhhhhcccccccccccccccccccccccccccc
Confidence            999999997532           122222  1     3788876   3544433221101             0112222


Q ss_pred             HHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEec----CCCCCeEEEEEecCCCc-chHHHHHHHhhc
Q psy10669        201 HAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVT----GGTDVHLILIDLRKNKL-TGSKVELVLEEI  274 (337)
Q Consensus       201 ~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~----~~t~~h~v~V~~~~~~~-~~~~~~~~L~~~  274 (337)
                      ..+. .+.++.++.  ..++..++-.++++++.+.|.+. ++.+..    ..+..|..++.+..... .-.++.+.|.+.
T Consensus       231 sel~-Aaigl~qL~--~l~~~~~~R~~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~L~~~  307 (371)
T d2fnua1         231 NEIQ-SALGLSQLK--KAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLYPILMHQKFFTCKKLILESLHKR  307 (371)
T ss_dssp             CHHH-HHHHHHHHT--THHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCSCEEEEECGGGGGGHHHHHHHHHHT
T ss_pred             cchh-hhhhhhhhh--hccchhhhhhhhhhhhcccccccccccccccccccccccccccccccccchhHHHHHHHHHHHC
Confidence            2222 234444553  45677777888999999999874 444432    23455666666654321 335678889999


Q ss_pred             CceeccCc-ccchhhhhHh---hhC-CC-HHHHHHHHhh---C-CCcHHHHHHHHHHHHHHHhcC
Q psy10669        275 AIACNKNT-GISLAAEIQA---ISG-PK-LVDFQTCLHK---N-EDIVKKVAALKKEIEDYSNQF  329 (337)
Q Consensus       275 gI~v~~~~-girig~~~~t---~~G-~~-~~~~~~~~~~---~-~~~~~~~~~lr~~V~~~~~~f  329 (337)
                      ||.++..- .+- -.+...   ..+ .. .+.+.+..+.   . .-+.++++.+-+.|.++..+|
T Consensus       308 gI~~~~~y~pl~-~~~~~~~~~~~~~~pnae~~~~~~l~LP~~~~lt~~di~~I~~~i~~~~~~~  371 (371)
T d2fnua1         308 GILAQVHYKPIY-QYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSVLKTFESF  371 (371)
T ss_dssp             TEECBCCCCCGG-GSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcceeCcccc-cCHHHHhccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHHHHHHHHHHcC
Confidence            99887532 100 001111   111 11 2333333221   1 123567777888887777654

>d1b9ha_ c.67.1.4 (A:) 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase) {Amycolatopsis mediterranei [TaxId: 33910]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase)
species: Amycolatopsis mediterranei [TaxId: 33910]

Probab=99.14  E-value=1.2e-09  Score=103.35  Aligned_cols=218  Identities=13%  Similarity=0.068  Sum_probs=136.6

Q ss_pred             CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhh-CCc--
Q psy10669         43 SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKA-LPT--  119 (337)
Q Consensus        43 ~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aL-l~~--  119 (337)
                      +.+-++++...+.+       |+.++.+...+.++|    ++++++||.++     +|.++|||.|+..++.+| +++  
T Consensus        12 ~~~~~~~~~~~l~~-------g~~~~~~g~~v~~fE----~~~a~~~g~~~-----~v~~~SGt~Al~lal~~l~~~~gd   75 (384)
T d1b9ha_          12 DDAERNGLVRALEQ-------GQWWRMGGDEVNSFE----REFAAHHGAAH-----ALAVTNGTHALELALQVMGVGPGT   75 (384)
T ss_dssp             CHHHHHHHHHHHHT-------SCCBTTTCSHHHHHH----HHHHHHTTCSE-----EEEESCHHHHHHHHHHHTTCCTTC
T ss_pred             CHHHHHHHHHHHHc-------CCeeecCCHHHHHHH----HHHHHHHCcCe-----EEEeCCHHHHHHHHHHHcCCCCCC
Confidence            34445555555443       223345556788898    58899999997     689999999999999987 333  


Q ss_pred             ----------------------------------------ccc---cccEEEEcCcccccccChHHHHHHhhhcCCeEEE
Q psy10669        120 ----------------------------------------NNA---RFDFLSSGTTCYSRCLDYARFRQICDETDSIMFA  156 (337)
Q Consensus       120 ----------------------------------------~~a---~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~v  156 (337)
                                                              +..   +++.|++. ..++...|+.++.++|+++|.+++.
T Consensus        76 eVi~p~~t~~a~~~ai~~~g~~p~~~d~~~~~~~~d~~~~~~~i~~~tk~i~~~-~~~g~~~d~~~i~~~~~~~~i~lie  154 (384)
T d1b9ha_          76 EVIVPAFTFISSSQAAQRLGAVTVPVDVDAATYNLDPEAVAAAVTPRTKVIMPV-HMAGLMADMDALAKISADTGVPLLQ  154 (384)
T ss_dssp             EEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCTTEEEECCB-CGGGCCCCHHHHHHHHHHHTCCBCE
T ss_pred             EEEEeccccccccccccccccccccccccccccccchhhhcccccccccccccc-cccccccccccchhhhhhhhhhhhh
Confidence                                                    001   14677665 5889999999999999999999999


Q ss_pred             eccccccccc-----------eeeeec--c-----CCchhhh---hHHHHHhhcc--------------CCCCCCCCcHH
Q psy10669        157 DMSHISGLIA-----------GVKGVT--K-----TGEKILY---DYEEKINNAV--------------FPSLQGGPHNH  201 (337)
Q Consensus       157 D~AH~~Gli~-----------g~~~T~--~-----~Gg~i~~---~l~~~i~~~~--------------~p~~~g~~~~~  201 (337)
                      |+||+.|..-           ++.|-+  |     .||++++   ++.+++....              +.....+..++
T Consensus       155 D~a~a~ga~~~g~~~g~~g~~~~~Sf~~~K~i~~g~GG~i~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~G~n~rms  234 (384)
T d1b9ha_         155 DAAHAHGARWQGKRVGELDSIATFSFQNGKLMTAGEGGAVVFPDGETEKYETAFLRHSCGRPRDDRRYFHKIAGSNMRLN  234 (384)
T ss_dssp             ECTTCTTCEETTEEGGGSSSCEEEECCTTSSSCSSSCEEEEECTTCHHHHHHHHHHTBTTCCTTCSSCCCCSCCCBCBCB
T ss_pred             hhceecccccCCEecCcccccceecccccccccccccchhhhhhHHHHHHHHHHHhcCCCCccccccccccccccccccc
Confidence            9999987753           122221  2     3788875   3444322110              01111122233


Q ss_pred             HHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-CCCEEecC--C---CCCeEEEEEecCCCc-chHHHHHHHhhc
Q psy10669        202 AIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-RGYHVVTG--G---TDVHLILIDLRKNKL-TGSKVELVLEEI  274 (337)
Q Consensus       202 ~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~G~~v~~~--~---t~~h~v~V~~~~~~~-~~~~~~~~L~~~  274 (337)
                      .+.| ++++.++  ..+++..++-.+|++++.+.|.+ .|+.....  .   ...|..++.+....- .-.++.+.|.+.
T Consensus       235 ~l~A-aig~~qL--~~ld~~~~~R~~~~~~y~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rd~l~~~L~~~  311 (384)
T d1b9ha_         235 EFSA-SVLRAQL--ARLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPGLTEERRNALVDRLVEA  311 (384)
T ss_dssp             HHHH-HHHHHHH--TTHHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECTTCCHHHHHHHHHHHHHT
T ss_pred             cchh-hhhhhhh--hhcccchhhhhhhhhhhhhhhhcccccccccccccccccccccccceecccccccHHHHHHHHHHC
Confidence            3322 3344454  24667788888999999999988 56654431  1   112344444432221 123577888889


Q ss_pred             Cceecc
Q psy10669        275 AIACNK  280 (337)
Q Consensus       275 gI~v~~  280 (337)
                      ||.+..
T Consensus       312 GI~~~~  317 (384)
T d1b9ha_         312 GLPAFA  317 (384)
T ss_dssp             TCCEEE
T ss_pred             CCCeee
Confidence            998764

>d2z67a1 c.67.1.9 (A:1-434) Selenocysteinyl-tRNA synthase (SepSecS) {Methanococcus maripaludis [TaxId: 39152]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Methanococcus maripaludis [TaxId: 39152]

Probab=99.07  E-value=5.4e-09  Score=99.61  Aligned_cols=195  Identities=11%  Similarity=0.075  Sum_probs=121.8

Q ss_pred             HHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhC---C-c------------------------------
Q psy10669         74 IDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKAL---P-T------------------------------  119 (337)
Q Consensus        74 ~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl---~-~------------------------------  119 (337)
                      ...+|......+++++|.+..   +.+.+.+++.++.+++++.-   + +                              
T Consensus       111 ~~~~~~~~~~~~~~~~g~~~~---~~~~~~~t~~~~~~~l~a~r~~~~~~~vi~s~~~H~s~~k~~~~~g~~~~~v~~~~  187 (434)
T d2z67a1         111 MYALTNKILESFFKQLGLNVH---AIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSFVGMNMRLVETVL  187 (434)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCE---EEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHTTCEEEEECCEE
T ss_pred             HHHHHHHHHHHHHHhcCCCcc---eeecCcHHHHHHHHHHHHHHHhhcCceEEEeccCCHHHHHHHHHhCCcceEEEeec
Confidence            345666555667899998862   22444444567778877762   1 1                              


Q ss_pred             ------------c--c-----c-cccEEEEcCcc--cccccChHHHHHHhhhcCCeEEEeccccccccc-----------
Q psy10669        120 ------------N--N-----A-RFDFLSSGTTC--YSRCLDYARFRQICDETDSIMFADMSHISGLIA-----------  166 (337)
Q Consensus       120 ------------~--~-----a-~pklII~~~S~--~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----------  166 (337)
                                  +  +     + ++.+|+++..+  ++..-|+++|.++|+++|++|+||+||+.++..           
T Consensus       188 ~~~~~~~d~~~l~~~i~~~~~~~~~~~v~~~~~~~~~g~~~~l~~i~~~~~~~~~~l~vD~a~g~~~~~~~~~~~~~~~~  267 (434)
T d2z67a1         188 DGDRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFKY  267 (434)
T ss_dssp             ETTEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHTS
T ss_pred             CCCccCCCHHHHHHHHHhhhhcCCceEEEeccCcCCCccccCHHHHHHHHHHhCCeEEEeccchhhhhhccccccccccC
Confidence                        0  0     0 13345555333  356778999999999999999999999876532           


Q ss_pred             e---eeee-cc-----CC-chhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHH
Q psy10669        167 G---VKGV-TK-----TG-EKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLS  233 (337)
Q Consensus       167 g---~~~T-~~-----~G-g~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~  233 (337)
                      +   ++++ +|     .| |++..   ++.+++.+. +++..++  .+ ...+.+++..+....+++..++..+++++++
T Consensus       268 ~~D~~~~s~hK~l~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~--~~-~~~~~a~l~~~~~~g~~~~~~~~~~~a~~l~  343 (434)
T d2z67a1         268 RVDAVVSSSDKNLLTPIGGGLVYSTDAEFIKEISLS-YPGRASA--TP-VVNTLVSLLSMGSKNYLELVKNQKNSKKLLD  343 (434)
T ss_dssp             CCSEEEEEHHHHHCCCSSCEEEEESCHHHHHHHHTT-SCSCBCS--HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcceEEEcCccccccCCCccccccCcHHHHHHHHhh-ccccccc--ch-HHHHHHHHHHHHHhcchhHHHHHHHHHHHHH
Confidence            1   2333 32     34 34433   355666554 4443332  22 3333344445545567889999999999999


Q ss_pred             HHHHh----CCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceec
Q psy10669        234 DEMIK----RGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACN  279 (337)
Q Consensus       234 ~~L~~----~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~  279 (337)
                      +.|++    .|+++..  ++++..++. .. +.+..++...|.+.||...
T Consensus       344 ~~L~~l~~~~g~~ll~--~~~~~~~~~-~~-~~~~~~l~~~L~~~gI~g~  389 (434)
T d2z67a1         344 ELLNDLSKKTGGKFLD--VESPIASCI-SV-NSDPVEIAAKLYNLRVTGP  389 (434)
T ss_dssp             HHHHHHHHHSSCCBCC--CCCSSEEEE-EC-SSCHHHHHHHHHHTTEESC
T ss_pred             HHHHHhhhhcCceecC--CCCCceeee-ec-CCCHHHHHHHHHHcCCeee
Confidence            99987    5887765  344433332 22 2367888889998898754

>d2c0ra1 c.67.1.4 (A:2-362) Phosphoserine aminotransferase, PSAT {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Bacillus circulans, subsp. alkalophilus [TaxId: 1397]

Probab=99.06  E-value=1.2e-09  Score=101.34  Aligned_cols=243  Identities=16%  Similarity=0.079  Sum_probs=135.7

Q ss_pred             eeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCc-Cc--cchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCc--hhH
Q psy10669         35 LIASENFTSLAVLECLGSCLQNKYSEGLPGKRYY-GG--NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGS--PAN  109 (337)
Q Consensus        35 l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~-~G--~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt--~AN  109 (337)
                      .-|.=--+|++|+++|...+.+-+   +.|+..+ -+  .....++-..+++.++++|+++.+   ..+.+++|+  .++
T Consensus         7 F~pGP~~vp~~V~eam~~~~~~~~---~~~~~~~~~sHRs~ef~~~~~~~r~~l~~l~~~~~~---~~i~~~~gs~t~~~   80 (361)
T d2c0ra1           7 FNAGPAALPLEVLERAQAEFVDYQ---HTGMSIMEMSHRGAVYEAVHNEAQARLLALLGNPTG---YKVLFIQGGASTQF   80 (361)
T ss_dssp             CCSSSCCCCHHHHHHHHHTSSSST---TSSSCGGGSCTTSHHHHHHHHHHHHHHHHHTTCCSS---EEEEEESSHHHHHH
T ss_pred             cCCCCcCCCHHHHHHHHHHHhhhc---ccCccccccCcCCHHHHHHHHHHHHHHHHHhCCCCC---CEEEEECCCchHHH
Confidence            344445569999999987766532   2222221 11  234456777889999999999764   257776663  345


Q ss_pred             HHHHHhhCCc-----------------------------------------cc--c-c-ccEEEEcCcccccccChHHHH
Q psy10669        110 FAVCEKALPT-----------------------------------------NN--A-R-FDFLSSGTTCYSRCLDYARFR  144 (337)
Q Consensus       110 ~~v~~aLl~~-----------------------------------------~~--a-~-pklII~~~S~~~~~~d~~~l~  144 (337)
                      -++...+..+                                         .+  . + .+...+. ..-+...|..++.
T Consensus        81 ea~~~~l~~~~~~~l~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~tg~~~~~~~i~  159 (361)
T d2c0ra1          81 AMIPMNFLKEGQTANYVMTGSWASKALKEAKLIGDTHVAASSEASNYMTLPKLQEIQLQDNAAYLH-LTSNETIEGAQFK  159 (361)
T ss_dssp             HHHHHHHCCTTCEEEEEECSHHHHHHHHHHHHHSCEEEEEECGGGTTCSCCCGGGCCCCTTEEEEE-EESEETTTTEECS
T ss_pred             HHHHhccccCCCceEEEeechhhhhhhhhhhhcCceeeeeccccccccchhhhhhhcccCcceEEE-EecccceecceEE
Confidence            6665566543                                         11  1 1 2333332 1234566777888


Q ss_pred             HHhhhcCCeEEEeccccccccce--------eeeecc----CC--chhhh---------------hHHHHHhhccCCCCC
Q psy10669        145 QICDETDSIMFADMSHISGLIAG--------VKGVTK----TG--EKILY---------------DYEEKINNAVFPSLQ  195 (337)
Q Consensus       145 eia~~~ga~l~vD~AH~~Gli~g--------~~~T~~----~G--g~i~~---------------~l~~~i~~~~~p~~~  195 (337)
                      ++|+++|++++||++|++|.+..        +.++.|    .|  ++++.               ++......   ....
T Consensus       160 ~~~~~~~al~~vDavss~g~~~id~~~~di~~~s~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~  236 (361)
T d2c0ra1         160 AFPDTGSVPLIGDMSSDILSRPFDLNQFGLVYAGAQKNLGPSGVTVVIVREDLVAESPKHLPTMLRYDTYVKN---NSLY  236 (361)
T ss_dssp             SCCCCTTSCEEEECTTTTTSSCCCGGGCSEEEEETTTTTCCSSCEEEEEEGGGSSSCCTTSCGGGCHHHHHHT---TTCS
T ss_pred             EeeccCCceEEEEeeccccccccccccceeEEEecccccccccCcEEEEEhHHhhhCcccccccccccccccc---cccc
Confidence            99999999999999999999881        122221    12  22211               11112222   1223


Q ss_pred             CCCcHHHHHHHHHHHHHHhchhh-HHHHHHHHHHHHHHHHHHHhCCCE--Eec-CCCCCe-EEEEEecCCCcchHHHHHH
Q psy10669        196 GGPHNHAIGAIATAMLQAQSDEF-KSYQAQVKANASHLSDEMIKRGYH--VVT-GGTDVH-LILIDLRKNKLTGSKVELV  270 (337)
Q Consensus       196 g~~~~~~iaala~a~~e~~~~~~-~~y~~~v~~na~~l~~~L~~~G~~--v~~-~~t~~h-~v~V~~~~~~~~~~~~~~~  270 (337)
                      .++.++.+.+...+.......+. ....++...+.+.+.......+..  ... ....++ ++.+.+ ..+.+..++.+.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rS~~~~~~~~-~~~~~~~~~~~~  315 (361)
T d2c0ra1         237 NTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRSDMNITFRL-ASEELEKEFVKA  315 (361)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSCGGGBCSSEEEEEC-SCHHHHHHHHHH
T ss_pred             ccccceeeehhhhHHHhhhhccchHHHHHHHHHHHHHhhhhhhhcccccccCCChhhccceEEEEEC-CCcccHHHHHHH
Confidence            34455555555544444433222 334444445555555555543222  221 112233 344444 346678899999


Q ss_pred             HhhcCceeccCc----ccchhh
Q psy10669        271 LEEIAIACNKNT----GISLAA  288 (337)
Q Consensus       271 L~~~gI~v~~~~----girig~  288 (337)
                      |++.||.+.+-.    |+|||.
T Consensus       316 L~~~GI~~~~G~~~~g~~RIs~  337 (361)
T d2c0ra1         316 SEQEGFVGLKGHRSVGGLRASI  337 (361)
T ss_dssp             HHHTTEESCBCCTTTCSEEEEC
T ss_pred             HHHCCCEEecCCCcCCeEEEEe
Confidence            999999986632    789885

>d1v2da_ c.67.1.1 (A:) Glutamine aminotransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Glutamine aminotransferase
species: Thermus thermophilus [TaxId: 274]

Probab=99.01  E-value=1.4e-08  Score=94.28  Aligned_cols=226  Identities=12%  Similarity=0.117  Sum_probs=133.5

Q ss_pred             cceeeeccCCC---CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-c
Q psy10669         31 NGIELIASENF---TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-S  106 (337)
Q Consensus        31 ~~i~l~asen~---~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t  106 (337)
                      .-|+| +..|.   .+|.+++|+...+...  .+|+..   .|.   .++    |+.++++|+.++    -+|.+++| +
T Consensus        26 ~~I~l-s~g~p~~~~p~~i~~al~~~l~~~--~~Y~~~---~G~---~el----r~aiA~~~~~~~----~~Iiit~G~~   88 (368)
T d1v2da_          26 GAVNL-GQGFPSNPPPPFLLEAVRRALGRQ--DQYAPP---AGL---PAL----REALAEEFAVEP----ESVVVTSGAT   88 (368)
T ss_dssp             TCEEC-CCCSCSSCCCHHHHHHHHHHTTTS--CSCCCT---TCC---HHH----HHHHHHHHTSCG----GGEEEESSHH
T ss_pred             CCEEe-cCCCCCCCCCHHHHHHHHHHhhcc--cCCCCC---cCC---HHH----HHHHHhhcccCC----cceeeccchH
Confidence            45666 33332   4799999998765431  222221   121   223    467789999987    36888888 6


Q ss_pred             hhHHHHHHhhCCc--------------------------------------------ccc-c--ccEEE-EcCcc-cccc
Q psy10669        107 PANFAVCEKALPT--------------------------------------------NNA-R--FDFLS-SGTTC-YSRC  137 (337)
Q Consensus       107 ~AN~~v~~aLl~~--------------------------------------------~~a-~--pklII-~~~S~-~~~~  137 (337)
                      +++..++.+++++                                            +.+ +  +++|+ +.+++ .+..
T Consensus        89 ~al~~~~~~l~~~~d~v~~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~NPtG~~  168 (368)
T d1v2da_          89 EALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGFRLDLSALEKALTPRTRALLLNTPMNPTGLV  168 (368)
T ss_dssp             HHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHTTCCTTEEEEEEESSCTTTCCC
T ss_pred             HHHHHHhhccccccccccccCCcchhhhhHHHhcCCccceeccccccccccCCHHHHHHhhccCceEEEEcCCCCccccc
Confidence            7888888898764                                            101 1  44444 44543 3467


Q ss_pred             cC---hHHHHHHhhhcCCeEEEeccccccccce--------------e-eeecc-------CCchhhh--hHHHHHhhcc
Q psy10669        138 LD---YARFRQICDETDSIMFADMSHISGLIAG--------------V-KGVTK-------TGEKILY--DYEEKINNAV  190 (337)
Q Consensus       138 ~d---~~~l~eia~~~ga~l~vD~AH~~Gli~g--------------~-~~T~~-------~Gg~i~~--~l~~~i~~~~  190 (337)
                      .+   +++|.++|+++|++++.|+.+.......              + .+..|       +-|++..  ++.+.+....
T Consensus       169 ~~~~~l~~l~~~a~~~~i~ii~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sk~~~~~G~R~g~~~~~~~~~~~~~~~~  248 (368)
T d1v2da_         169 FGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLREFAPERTFTVGSAGKRLEATGYRVGWIVGPKEFMPRLAGMR  248 (368)
T ss_dssp             CCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCHHHHCTTTEEEEEEHHHHTTCGGGCCEEEECCTTTHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHcCCeeeechhhhhhcccccccccccccccccceeecccccccccccccccccccccccchhhhhh
Confidence            76   4456678899999999999987655551              1 12222       1233333  4444333221


Q ss_pred             CCCCCCCCcHHHHHHHHHHHHHHh-chhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHH
Q psy10669        191 FPSLQGGPHNHAIGAIATAMLQAQ-SDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVEL  269 (337)
Q Consensus       191 ~p~~~g~~~~~~iaala~a~~e~~-~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~  269 (337)
                      ..... ++..+...+.+.++.... ....+..++...++.+++.+.|.+.|+++..+ ..+..+++++..  .+   +.+
T Consensus       249 ~~~~~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~p-~g~~~~~~~l~~--~~---~~~  321 (368)
T d1v2da_         249 QWTSF-SAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAMGLRVYVP-EGTYFLMAELPG--WD---AFR  321 (368)
T ss_dssp             HHHTS-SCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHTTCCEECC-SBSSEEEEECTT--CC---HHH
T ss_pred             hcccc-ccccccccccccccccccchhhHHHHHHHHHHhhhhhhhhHHhcCcEEecC-CceeEEEEeCCc--cH---HHH
Confidence            11112 233333333333333221 22346677778899999999999999998753 235567788753  33   346


Q ss_pred             HHhhcCceecc
Q psy10669        270 VLEEIAIACNK  280 (337)
Q Consensus       270 ~L~~~gI~v~~  280 (337)
                      +|+++||.+.+
T Consensus       322 ll~~~gI~v~p  332 (368)
T d1v2da_         322 LVEEARVALIP  332 (368)
T ss_dssp             HHHHTCEECEE
T ss_pred             HHHhCCEEEEe
Confidence            78899999975

>d1w23a_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Bacillus alcalophilus [TaxId: 1445]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Bacillus alcalophilus [TaxId: 1445]

Probab=98.98  E-value=1.2e-08  Score=93.98  Aligned_cols=243  Identities=14%  Similarity=0.091  Sum_probs=136.5

Q ss_pred             eeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcC----cCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCc-hh
Q psy10669         34 ELIASENFTSLAVLECLGSCLQNKYSEGLPGKRY----YGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGS-PA  108 (337)
Q Consensus        34 ~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~----~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt-~A  108 (337)
                      |.-|.=--+|++|++++...+.+ |..  .|+..    ++ +....++-..+|+.++++|+++.+   ..+.+++|+ .+
T Consensus         6 nF~pGP~~~p~~V~~a~~~~~~~-~~~--~~~~~~~~sHR-s~~~~~~~~~~r~~l~~l~~~~~~---~~i~~~~gt~~~   78 (360)
T d1w23a_           6 NFNAGPSALPKPALERAQKELLN-FND--TQMSVMELSHR-SQSYEEVHEQAQNLLRELLQIPND---YQILFLQGGASL   78 (360)
T ss_dssp             ECCSSSCCCCHHHHHHHHHTSSS-STT--SSSCGGGSCTT-SHHHHHHHHHHHHHHHHHHTCCTT---EEEEEESSHHHH
T ss_pred             EeCCCCcCCCHHHHHHHHHHHHh-hcc--cCccccccCcC-CHHHHHHHHHHHHHHHHHhCCCCC---CEEEEeCCcHHH
Confidence            34444455799999999887554 322  12222    33 233456767899999999999764   358888885 34


Q ss_pred             H-HHHHHhhCCc-----------------------------------------cc---cc-ccEEEEcCcccccccChHH
Q psy10669        109 N-FAVCEKALPT-----------------------------------------NN---AR-FDFLSSGTTCYSRCLDYAR  142 (337)
Q Consensus       109 N-~~v~~aLl~~-----------------------------------------~~---a~-pklII~~~S~~~~~~d~~~  142 (337)
                      + .++...+.++                                         .+   .+ .+...+. .+-+...|+++
T Consensus        79 ~~~~~~~~~~~~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~tg~~~~~~~  157 (360)
T d1w23a_          79 QFTMLPMNLLTKGTIGNYVLTGSWSEKALKEAKLLGETHIAASTKANSYQSIPDFSEFQLNENDAYLH-ITSNNTIYGTQ  157 (360)
T ss_dssp             HHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHTTSEEEEEEECGGGTSCSCCCGGGCCCCTTEEEEE-EESEETTTTEE
T ss_pred             HHHHHHhhhcccCcccceeeccchhhhhHHHHHHhhhcceeeccccccccchhhhhhcccccccceeE-ecCCcccccee
Confidence            4 4444444332                                         00   01 3444333 34567889999


Q ss_pred             HHHHhhhcCCeEEEeccccccccc------eee--eec-cC-----Cchhhh-h--------------HHHHHhhccCCC
Q psy10669        143 FRQICDETDSIMFADMSHISGLIA------GVK--GVT-KT-----GEKILY-D--------------YEEKINNAVFPS  193 (337)
Q Consensus       143 l~eia~~~ga~l~vD~AH~~Gli~------g~~--~T~-~~-----Gg~i~~-~--------------l~~~i~~~~~p~  193 (337)
                      +.++|+++|++++||++|++|.+.      ++.  ++. ++     +|+++. .              +.....   .+.
T Consensus       158 i~~~~~~~g~l~ivDavqs~g~~~id~~~~~vd~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~  234 (360)
T d1w23a_         158 YQNFPEINHAPLIADMSSDILSRPLKVNQFGMIYAGAQKNLGPSGVTVVIVKKDLLNTKVEQVPTMLQYATHIK---SDS  234 (360)
T ss_dssp             CSSCCCCCSSCEEEECTTTTTSSCCCGGGCSEEEEETTTTTSCTTCEEEEEEHHHHCSCCTTCCGGGCHHHHHH---TTT
T ss_pred             eeeccccceeeEEeeccccccccccccccccceEEeeccccccCCcceeeEechhhhcccccCCcchhhhhhhh---hhh
Confidence            999999999999999999999998      221  121 11     122211 1              111111   222


Q ss_pred             CCCCCcHHHHHHHHHHHHHHhchhh-HHHHHHHHHHHHHHHHHHHhC-CCE-Eec-CCCCCe-EEEEEecCCCcchHHHH
Q psy10669        194 LQGGPHNHAIGAIATAMLQAQSDEF-KSYQAQVKANASHLSDEMIKR-GYH-VVT-GGTDVH-LILIDLRKNKLTGSKVE  268 (337)
Q Consensus       194 ~~g~~~~~~iaala~a~~e~~~~~~-~~y~~~v~~na~~l~~~L~~~-G~~-v~~-~~t~~h-~v~V~~~~~~~~~~~~~  268 (337)
                      ...++..+...+...++..+..... ....++...+.+......... .+. +.. ....++ ++.+.+. .+....++.
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rS~~vvsf~i~-~~~~~~~~~  313 (360)
T d1w23a_         235 LYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYVGHAEKGSRSLMNVTFNLR-NEELNQQFL  313 (360)
T ss_dssp             CSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTTSSEESSCGGGBCSSEEEEECS-SHHHHHHHH
T ss_pred             hcccccceeeechhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhcccccccCCChhhcceeEEEEEcC-CCccHHHHH
Confidence            3345566666665555555543233 333334444444444443332 222 221 122233 3444443 344567788


Q ss_pred             HHHhhcCceeccCc----ccchhh
Q psy10669        269 LVLEEIAIACNKNT----GISLAA  288 (337)
Q Consensus       269 ~~L~~~gI~v~~~~----girig~  288 (337)
                      +.|.+.||.+..-.    ||||++
T Consensus       314 ~~l~~~GI~~~~G~~~~ggiRiS~  337 (360)
T d1w23a_         314 AKAKEQGFVGLNGHRSVGGCRASI  337 (360)
T ss_dssp             HHHHHTTEESCBCCTTTCSEEEEC
T ss_pred             HHHHHCCCeeeeCCCccCcEEEEe
Confidence            88999999975421    789874

>d2aeua1 c.67.1.8 (A:9-374) Hypothetical protein MJ0158 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SelA-like
domain: Hypothetical protein MJ0158
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.98  E-value=9.4e-09  Score=96.25  Aligned_cols=143  Identities=15%  Similarity=0.105  Sum_probs=87.0

Q ss_pred             HHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc-----------------------------------ccc---cc
Q psy10669         83 QRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT-----------------------------------NNA---RF  124 (337)
Q Consensus        83 ~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~-----------------------------------~~a---~p  124 (337)
                      +..++.|+.+..+  ..+.+.+|++||++++.+|.++                                   +.+   ++
T Consensus        57 ~~~~~~~~~~~~e--~~~~~~~~~~a~~~~l~al~~~~~vi~~~~~~~~~~~~~~~~l~g~~~v~~~d~e~l~~~i~~~t  134 (366)
T d2aeua1          57 EYGLKHLGGDEND--KCVGFNRTSSAILATILALKPKKVIHYLPELPGHPSIERSCKIVNAKYFESDKVGEILNKIDKDT  134 (366)
T ss_dssp             HHHHHHHTCCTTE--EEEEESSHHHHHHHHHHHHCCSEEEEECSSSSCCTHHHHHHHHTTCEEEEESCHHHHHTTCCTTE
T ss_pred             HHHHHHccCCCcc--EEEEeCCHHHHHHHHHHHhCCCCEEEEecCCCcchhHHHHHHhcCCeEECCCCHHHHHHhcCCCc
Confidence            3456667766532  1355666789999999999654                                   111   26


Q ss_pred             cEEEEcCcccccccC---hHHHHHHhhhcCCeEEEeccccccccc----------e---eeee------ccCCchhhh--
Q psy10669        125 DFLSSGTTCYSRCLD---YARFRQICDETDSIMFADMSHISGLIA----------G---VKGV------TKTGEKILY--  180 (337)
Q Consensus       125 klII~~~S~~~~~~d---~~~l~eia~~~ga~l~vD~AH~~Gli~----------g---~~~T------~~~Gg~i~~--  180 (337)
                      |+|++....++..++   +++|.+||+++|+++++|++|..++..          |   ++++      ++++|++++  
T Consensus       135 k~i~~~~p~n~~~~~~~~l~~i~~ia~~~~~~~i~De~y~~~~~~~~~~~~~~~~~~di~~~S~sK~~~g~~~G~i~~~~  214 (366)
T d2aeua1         135 LVIITGSTMDLKVIELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPALKLGADLVVTSTDKLMEGPRGGLLAGKK  214 (366)
T ss_dssp             EEEEECBCTTSCBCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHHHHTCSEEEEETTSSSSSCSCEEEEEEH
T ss_pred             eEEEEEecCCCCcCCHHHHHHHHHHhccCcEEEEEecCccccccccccCCCHhhcCceEEEecccccccccceeEEEecH
Confidence            888887555554554   556778899999999999999988765          1   2222      245688876  


Q ss_pred             hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHH
Q psy10669        181 DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHL  232 (337)
Q Consensus       181 ~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l  232 (337)
                      ++.+++....+. +..++.++...++..+++.+ .   .+.+++..+|++.+
T Consensus       215 ~~i~~~~~~~~~-~g~~~~~~~~~a~~~aL~tl-~---~~r~~~~~~~~~~i  261 (366)
T d2aeua1         215 ELVDKIYIEGTK-FGLEAQPPLLAGIYRALKNF-N---LERIRKAFERAKNF  261 (366)
T ss_dssp             HHHHHHHHHHHT-TTCBCCHHHHHHHHHHHHHC-C---HHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHhc-ccccCCHHHHHHHHHHHHhc-c---HHHHHHHHHHHHHH
Confidence            566666543221 22344455555555555433 2   12334445555543

>d1bjna_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Escherichia coli [TaxId: 562]

Probab=98.92  E-value=2e-08  Score=91.89  Aligned_cols=244  Identities=11%  Similarity=-0.023  Sum_probs=136.1

Q ss_pred             eeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCc---cchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCc-h-h
Q psy10669         34 ELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGG---NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGS-P-A  108 (337)
Q Consensus        34 ~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G---~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt-~-A  108 (337)
                      |.-|.=-.+||+|++++...+.+.+ .+  |+..+.-   +....++-..+|+.++++||++.+   ..|.+++|+ . +
T Consensus         4 nF~pGP~~~p~~Vl~a~~~~~~~~~-~~--~~~~~~~sHRs~ef~~l~~~~r~~l~~l~~~~~~---~~v~~~~gs~t~~   77 (360)
T d1bjna_           4 NFSSGPAMLPAEVLKQAQQELRDWN-GL--GTSVMEVSHRGKEFIQVAEEAEKDFRDLLNVPSN---YKVLFCHGGGRGQ   77 (360)
T ss_dssp             ECCSSSCCCCHHHHHHHHHTSSSGG-GS--SSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTT---EEEEEESSHHHHH
T ss_pred             EeCCCCcCCCHHHHHHHHHHHhhhc-cc--CccccccCcCCHHHHHHHHHHHHHHHHHhCCCCC---CEEEEECCchHHH
Confidence            3444455679999999998766432 22  2221111   233445666788999999999764   357776663 4 4


Q ss_pred             HHHHHHhhCCc-------------------------------------------cc-c--ccc--EEEEcCcccccccCh
Q psy10669        109 NFAVCEKALPT-------------------------------------------NN-A--RFD--FLSSGTTCYSRCLDY  140 (337)
Q Consensus       109 N~~v~~aLl~~-------------------------------------------~~-a--~pk--lII~~~S~~~~~~d~  140 (337)
                      |.++...+.++                                           +. .  +++  .+...++.-+...|.
T Consensus        78 ~~a~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~t~~~~~~  157 (360)
T d1bjna_          78 FAAVPLNILGDKTTADYVDAGYWAASAIKEAKKYCTPNVFDAKVTVDGLRAVKPMREWQLSDNAAYMHYCPNETIDGIAI  157 (360)
T ss_dssp             HHHHHHHHCTTCCEEEEEESSHHHHHHHHHHTTTSEEEEEECEEEETTEEEECCGGGCCCCSSCSCEEECSEETTTTEEC
T ss_pred             HhhhhhcccccccccceecccchhhhhHHHHhhcCccceeeccccCCCcchhhhhhhhccCCceeEEEecccccccCccc
Confidence            66655555443                                           11 1  134  444444444566666


Q ss_pred             HHHHHHhhhcCCeEEEeccccccccc------e--eeeecc-----CC-chhhh-h--------------HHHHHhhccC
Q psy10669        141 ARFRQICDETDSIMFADMSHISGLIA------G--VKGVTK-----TG-EKILY-D--------------YEEKINNAVF  191 (337)
Q Consensus       141 ~~l~eia~~~ga~l~vD~AH~~Gli~------g--~~~T~~-----~G-g~i~~-~--------------l~~~i~~~~~  191 (337)
                      ..+  .++.+++.+++|++++.|-+.      .  +.+++|     -| ++++. .              .....+..  
T Consensus       158 ~~i--~~~~~~~~v~vDa~~~~~~~~vd~~~~dv~~~ss~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  233 (360)
T d1bjna_         158 DET--PDFGADVVVAADFSSTILSRPIDVSRYGVIYAGAQKNIGPAGLTIVIVREDLLGKANIACPSILDYSILNDNG--  233 (360)
T ss_dssp             CCC--CCCCTTCCEEEECTTTTTSSCCCGGGCSEEEEETTTTTSSTTCEEEEEEGGGCSCCCTTSCGGGCHHHHHHTT--
T ss_pred             cce--ecccccceeeeeeeccccceeeeeccceeEEEEcccccccCCCceeEeeehhhhhccccCCcchhhHHHHhhh--
Confidence            543  456779999999998887776      1  233332     12 22211 0              11122211  


Q ss_pred             CCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecC--CCCCe-EEEEEecCCCcchHHHH
Q psy10669        192 PSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTG--GTDVH-LILIDLRKNKLTGSKVE  268 (337)
Q Consensus       192 p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~--~t~~h-~v~V~~~~~~~~~~~~~  268 (337)
                      .....++.++..++...+.............++..+.++.+.+.+...+......  ...++ ++.+.+. .+.+..++.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rs~~v~~f~~~-~~~~~~~~~  312 (360)
T d1bjna_         234 SMFNTPPTFAWYLSGLVFKWLKANGGVAEMDKINQQKAELLYGVIDNSDFYRNDVAKRNRSRMNVPFQLA-DSALDKLFL  312 (360)
T ss_dssp             TCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCSSEECCBCGGGBCSSEEEEEES-SGGGHHHHH
T ss_pred             hhccccccchHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhccccccccCCcccccceEEEEEcC-CcccHHHHH
Confidence            1223344444444444444444333334455566666666666666666665431  12233 3334443 456788899


Q ss_pred             HHHhhcCceeccCc----ccchhh
Q psy10669        269 LVLEEIAIACNKNT----GISLAA  288 (337)
Q Consensus       269 ~~L~~~gI~v~~~~----girig~  288 (337)
                      +.|+++||.+.+-.    ++|||+
T Consensus       313 ~~l~~~Gi~~~~G~~~~g~~Ris~  336 (360)
T d1bjna_         313 EESFAAGLHALKGHRVVGGMRASI  336 (360)
T ss_dssp             HHHHHTTEECCBCCTTTCSEEEEC
T ss_pred             HHHHHCCCEeecCCCccCeEEEEe
Confidence            99999999886532    689986

>d1o69a_ c.67.1.4 (A:) Aminotransferase homolog WlaK (PglE, Cj1121c) {Campylobacter jejuni [TaxId: 197]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Aminotransferase homolog WlaK (PglE, Cj1121c)
species: Campylobacter jejuni [TaxId: 197]

Probab=98.91  E-value=1.5e-08  Score=94.60  Aligned_cols=155  Identities=15%  Similarity=0.151  Sum_probs=102.4

Q ss_pred             cchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhh-CCc------------------------------
Q psy10669         71 NQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKA-LPT------------------------------  119 (337)
Q Consensus        71 ~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aL-l~~------------------------------  119 (337)
                      -..++++|    ++++++||.++     ++.+.|||.|+..++.++ +++                              
T Consensus        20 G~~~~~fE----~~~~~~~~~~~-----~~~~~SgT~Al~lal~~l~~~~gdeVi~p~~t~~a~~~~~~~~g~~pv~~Di   90 (374)
T d1o69a_          20 GEFVNRFE----QSVKDYSKSEN-----ALALNSATAALHLALRVAGVKQDDIVLASSFTFIASVAPICYLKAKPVFIDC   90 (374)
T ss_dssp             THHHHHHH----HHHHHHHCCSE-----EEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCGGGTHHHHHTTCEEEEECB
T ss_pred             CHHHHHHH----HHHHHHHCcCe-----EEEeCCHHHHHHHHHHHcCCCCcCEEEeCCcchHhhHHHHhhccceeEeccc
Confidence            35688899    57899999996     789999999999888888 332                              


Q ss_pred             ------------c--cc---cccEEEEcCcccccccChHHHHHHhhhcCCeEEEeccccccccc-----------eeeee
Q psy10669        120 ------------N--NA---RFDFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHISGLIA-----------GVKGV  171 (337)
Q Consensus       120 ------------~--~a---~pklII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----------g~~~T  171 (337)
                                  +  ..   +++.|++. ..++...|+.++.++|+++|.+||-|+||+.|.-=           ++.|-
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~aii~~-~~~G~~~d~~~i~~~~~~~~i~vIED~a~a~g~~~~~~~~G~~gd~~~fSf  169 (374)
T d1o69a_          91 DETYNIDVDLLKLAIKECEKKPKALILT-HLYGNAAKMDEIVEICKENDIVLIEDAAEALGSFYKNKALGTFGEFGVYSY  169 (374)
T ss_dssp             CTTSSBCHHHHHHHHHHCSSCCCEEEEE-CGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEEC
T ss_pred             ccccccccccccccchhccccccccccc-ccccchhhhHHHHHHhhccCcchhhhhhhhhcceECCeecCCCCceEEEec
Confidence                        1  01   26788876 48899999999999999999999999999997642           12222


Q ss_pred             c--c-----CCchhhh---hHHHHHhhc---cCCC--------CCCCC-cHHHHHHHHHHHHHHhchhhHHHHHHHHHHH
Q psy10669        172 T--K-----TGEKILY---DYEEKINNA---VFPS--------LQGGP-HNHAIGAIATAMLQAQSDEFKSYQAQVKANA  229 (337)
Q Consensus       172 ~--~-----~Gg~i~~---~l~~~i~~~---~~p~--------~~g~~-~~~~iaala~a~~e~~~~~~~~y~~~v~~na  229 (337)
                      +  |     -||++++   ++.+++...   -...        ...+. .....|++.  +.++  ..+++..++-.+++
T Consensus       170 ~~~K~l~tgeGG~i~tnn~~~~~~~~~~~~~g~~~~~~~~~~~~G~N~rm~ei~Aaig--~~qL--~~l~~~i~~r~~i~  245 (374)
T d1o69a_         170 NGNKIITTSGGGMLIGKNKEKIEKARFYSTQARENCLHYEHLDYGYNYRLSNVLGAIG--VAQM--EVLEQRVLKKREIY  245 (374)
T ss_dssp             CTTSSSCCSSCEEEEESCHHHHHHHHHHTBTCCCSSSSCCCSSCCCBCBCCHHHHHHH--HHHH--TTHHHHHHHHHHHH
T ss_pred             cCccccccccceeehhhhHHHHHhhccccccccccccccccccCCccccccchhhhhh--HHHH--hhhhhhcchhHHHH
Confidence            2  1     2677775   344433211   0000        11112 223333333  3344  24556666777888


Q ss_pred             HHHHHHHHhC
Q psy10669        230 SHLSDEMIKR  239 (337)
Q Consensus       230 ~~l~~~L~~~  239 (337)
                      +++.+.|.+.
T Consensus       246 ~~y~~~L~~~  255 (374)
T d1o69a_         246 EWYKEFLGEY  255 (374)
T ss_dssp             HHHHHHHTTT
T ss_pred             HHHHhhcccc
Confidence            8888988764

>d3bc8a1 c.67.1.9 (A:23-467) Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.87  E-value=6.9e-08  Score=91.84  Aligned_cols=151  Identities=13%  Similarity=0.128  Sum_probs=92.2

Q ss_pred             ccEEEEcCcc--cccccChHHHHHHhhhcCCeEEEeccccccccc---------------eeee-ec-----cCC-chhh
Q psy10669        124 FDFLSSGTTC--YSRCLDYARFRQICDETDSIMFADMSHISGLIA---------------GVKG-VT-----KTG-EKIL  179 (337)
Q Consensus       124 pklII~~~S~--~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~---------------g~~~-T~-----~~G-g~i~  179 (337)
                      +.+|++...+  ++...|+++|.+||+++|+++++|+||+.|+..               .+++ +|     +.| |+++
T Consensus       195 ~~~v~~~~~~~~~G~~~~~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~vd~~~~s~hK~~~~p~g~~~l~  274 (445)
T d3bc8a1         195 ILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIA  274 (445)
T ss_dssp             EEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHHHSCCCEEEEEHHHHHSCCSSCEEEE
T ss_pred             eEEEEEeCCCCCCeeehhHHHHHHHHHHhCCcEEEEccchhhhhhccccchhccCcCCcceEEecCccccccCCCCceee
Confidence            4566665444  478889999999999999999999999987643               1222 22     234 4444


Q ss_pred             h---hHHHHHhhccCCCC-CCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh----CCCEEecCCCCCe
Q psy10669        180 Y---DYEEKINNAVFPSL-QGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK----RGYHVVTGGTDVH  251 (337)
Q Consensus       180 ~---~l~~~i~~~~~p~~-~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~----~G~~v~~~~t~~h  251 (337)
                      .   ++.+.+... +++. .+++..    .+.+++..+....+.+..++..++++++.+.|.+    .|..+.......+
T Consensus       275 ~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~L~~l~~~~~~~~l~~~~~~~  349 (445)
T d3bc8a1         275 GFNEPFIQDISKM-YPGRASASPSL----DVLITLLSLGCSGYRKLLKERKEMFVYLSTQLKKLAEAHNERLLQTPHNPI  349 (445)
T ss_dssp             ESCHHHHHHHHHH-SCSCBCSHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCTTCSS
T ss_pred             eCChHHHHHHHHH-HhhcccCcchH----HHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHHhhcCceeecCCCCCc
Confidence            3   355566654 3332 222222    2234444444456678888899999999998876    4666654222233


Q ss_pred             EEEEEec----CCCcchHHHHHHHhhcCceec
Q psy10669        252 LILIDLR----KNKLTGSKVELVLEEIAIACN  279 (337)
Q Consensus       252 ~v~V~~~----~~~~~~~~~~~~L~~~gI~v~  279 (337)
                      ...+.+.    ..+.+..++...|.+.||...
T Consensus       350 ~~~~~l~~~~~~~~~~~~~l~~~L~~~gI~~~  381 (445)
T d3bc8a1         350 SLAMTLKTIDGHHDKAVTQLGSMLFTRQVSGA  381 (445)
T ss_dssp             EEEEECTTTSSSSSCHHHHHHHHHHHTTCCSC
T ss_pred             ceEEEeeeccccCCCCHHHHHHHHHHcCCCcc
Confidence            3334432    223355566677887787543

>d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermus thermophilus [TaxId: 274]

Probab=98.87  E-value=1.9e-07  Score=87.17  Aligned_cols=239  Identities=15%  Similarity=0.050  Sum_probs=134.0

Q ss_pred             ceeeeccCCC--CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chh
Q psy10669         32 GIELIASENF--TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPA  108 (337)
Q Consensus        32 ~i~l~asen~--~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~A  108 (337)
                      -|+|...+.-  .||.|++++...+.+. ..+|+...   |...   +-+...+...+-+|.+-..  -+|..++| ++|
T Consensus        33 vi~l~~g~p~~~~p~~i~~a~~~~~~~~-~~~Y~~~~---G~~~---lR~~ia~~~~~~~~~~~~~--~~i~it~G~~~a  103 (382)
T d1b5pa_          33 LVALTAGEPDFDTPEHVKEAARRALAQG-KTKYAPPA---GIPE---LREALAEKFRRENGLSVTP--EETIVTVGGSQA  103 (382)
T ss_dssp             CEECCCSSCSSCCCHHHHHHHHHHHHTT-CCSCCCTT---CCHH---HHHHHHHHHHHTTCCCCCG--GGEEEESHHHHH
T ss_pred             eEECCCCCCCCCCCHHHHHHHHHHHhcC-CcCCCCCC---CCHH---HHHHHHhhhhhhccccccc--ccceecCCHHHH
Confidence            3666665543  4899999998765432 12332221   3322   2211123444444543211  25777788 678


Q ss_pred             HHHHHHhhCCc-------------------------------------------ccc---cccEEE-EcCcc-cccccCh
Q psy10669        109 NFAVCEKALPT-------------------------------------------NNA---RFDFLS-SGTTC-YSRCLDY  140 (337)
Q Consensus       109 N~~v~~aLl~~-------------------------------------------~~a---~pklII-~~~S~-~~~~~d~  140 (337)
                      ...++.+++++                                           +.+   ++++++ +++.+ -+...+-
T Consensus       104 l~~~~~~l~~~gd~vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~P~NPTG~~~s~  183 (382)
T d1b5pa_         104 LFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPK  183 (382)
T ss_dssp             HHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHTTCCTTEEEEEEESSCTTTCCCCCH
T ss_pred             HHHHHHHhCCCCCEEEECCCCcHHHHHHHHHhcCeEEEEecccccccCCCHHHHHHhCCCCCeEEEECCCCCCcchhCCH
Confidence            88888999765                                           111   145444 44533 2355555


Q ss_pred             HH---HHHHhhhcCCeEEEeccccccccce--------------eeeec-c-------CCchhhh--hHHHHHhhccCCC
Q psy10669        141 AR---FRQICDETDSIMFADMSHISGLIAG--------------VKGVT-K-------TGEKILY--DYEEKINNAVFPS  193 (337)
Q Consensus       141 ~~---l~eia~~~ga~l~vD~AH~~Gli~g--------------~~~T~-~-------~Gg~i~~--~l~~~i~~~~~p~  193 (337)
                      ++   |.++|+++|++++.|++|.-=...+              +.++. |       +-|+++.  ++.+.+.......
T Consensus       184 ~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlR~G~~~~~~~~i~~~~~~~~~~  263 (382)
T d1b5pa_         184 EVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKEVIKAMASVSRQS  263 (382)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCTTTEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHcCeEEEEEccccceecCCCCCCHHHcCCCCEEEEecchhhccCcHhheEEEEECHHHHHHHHHHHHhc
Confidence            54   5577899999999999987322221              12222 2       2366654  4544443321222


Q ss_pred             CCCCCcHHHHHHHHHHHH--HHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHH
Q psy10669        194 LQGGPHNHAIGAIATAML--QAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVL  271 (337)
Q Consensus       194 ~~g~~~~~~iaala~a~~--e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L  271 (337)
                      ..+++. +...+...++.  .......+.+++...++.+.+.+.+.+.|+++..+ ..+-.+++++...+.+...+.+.|
T Consensus       264 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~p-~gg~~~~~~~~~~~~~~~~~~~~l  341 (382)
T d1b5pa_         264 TTSPDT-IAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRP-SGAFYVLMDTSPIAPDEVRAAERL  341 (382)
T ss_dssp             TCSCCH-HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCBCCC-SBTTEEEEECTTTCSSHHHHHHHH
T ss_pred             ccCccc-ccccccccccccccchhHHHHHHHHHHHhhhhHHHHHHhhcCCeEecC-CceEEEeEeCCCCCCCHHHHHHHH
Confidence            222333 32222222221  11112234556666777778888888889887642 345567899987777888888889


Q ss_pred             hhcCceeccC
Q psy10669        272 EEIAIACNKN  281 (337)
Q Consensus       272 ~~~gI~v~~~  281 (337)
                      .+.||.+.+-
T Consensus       342 ~e~gV~v~PG  351 (382)
T d1b5pa_         342 LEAGVAVVPG  351 (382)
T ss_dssp             HHTTEECEES
T ss_pred             HHCCEEEEeC
Confidence            9999998863

>d1d2fa_ c.67.1.3 (A:) Modulator in mal gene expression, MalY {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Modulator in mal gene expression, MalY
species: Escherichia coli [TaxId: 562]

Probab=98.80  E-value=4.1e-07  Score=83.94  Aligned_cols=226  Identities=13%  Similarity=0.078  Sum_probs=131.4

Q ss_pred             CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-chhHHHHHHhhCCc--
Q psy10669         43 SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SPANFAVCEKALPT--  119 (337)
Q Consensus        43 ~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~aLl~~--  119 (337)
                      ||.+.+|+.+.+.+. -.||+.   ..|.    ++.+...+.+++.||.+.+-  -+|..++| ++++..++.+++++  
T Consensus        14 p~~i~eal~~~~~~~-~~~Y~~---~~g~----~lr~~ia~~~~~~~g~~~~~--~~i~it~G~~~~l~~~~~~l~~~gd   83 (361)
T d1d2fa_          14 APCIIEALNQRLMHG-VFGYSR---WKND----EFLAAIAHWFSTQHYTAIDS--QTVVYGPSVIYMVSELIRQWSETGE   83 (361)
T ss_dssp             CHHHHHHHHHHHTTC-CCCCCC---SCCH----HHHHHHHHHHHHHSCCCCCG--GGEEEESCHHHHHHHHHHHSSCTTC
T ss_pred             CHHHHHHHHHHHhCC-CCCCCC---CCCH----HHHHHHHHHHHHHhCCCCCc--ceEEEeCCHHHHHHHHhhhcccccc
Confidence            689999988765431 113322   2231    22222223556666765210  25777788 67888889999865  


Q ss_pred             --------------------------------------------ccc--cccEEEEcCccc--ccccC---hHHHHHHhh
Q psy10669        120 --------------------------------------------NNA--RFDFLSSGTTCY--SRCLD---YARFRQICD  148 (337)
Q Consensus       120 --------------------------------------------~~a--~pklII~~~S~~--~~~~d---~~~l~eia~  148 (337)
                                                                  .+.  ++|+|++..-.+  +...+   +++|.++|+
T Consensus        84 ~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~~~~~~~~~~~~~i~l~~p~NPTG~~~s~~~~~~i~~~~~  163 (361)
T d1d2fa_          84 GVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEIMADLCE  163 (361)
T ss_dssp             EEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCCCTTHHHHHHHHHH
T ss_pred             ccccccccccchhHHHHhhcceEEeecccccccccccccccchhhcccCCceeEEecccccccccccchhhhhhhhhhhh
Confidence                                                        111  256777653333  34454   556778899


Q ss_pred             hcCCeEEEeccccccccce---------------eeee--------ccCCchhhh---hHHH-HHhhccCCCCCCCCcHH
Q psy10669        149 ETDSIMFADMSHISGLIAG---------------VKGV--------TKTGEKILY---DYEE-KINNAVFPSLQGGPHNH  201 (337)
Q Consensus       149 ~~ga~l~vD~AH~~Gli~g---------------~~~T--------~~~Gg~i~~---~l~~-~i~~~~~p~~~g~~~~~  201 (337)
                      ++|+++++|++|.--...+               +..+        +.+.|++..   ...+ .+.........+++...
T Consensus       164 ~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~v~~~s~SK~~~~~g~R~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (361)
T d1d2fa_         164 RHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWALLTSGSKSFNIPALTGAYGIIENSSSRDAYLSALKGRDGLSSPSVL  243 (361)
T ss_dssp             HTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEEEECSHHHHTCGGGCCEEEEECSHHHHHHHHHHHHTTSCCCSCCHH
T ss_pred             hhheeeeecccccccccccccccccccccccccccccccccccccccccceeeecchhHHHHHHhhhcccccccccchhh
Confidence            9999999999986433331               1111        123455432   1222 22221122224456666


Q ss_pred             HHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCEEecCCCCCeEEEEEecCCCcchHHHHHHH-hhcCcee
Q psy10669        202 AIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYHVVTGGTDVHLILIDLRKNKLTGSKVELVL-EEIAIAC  278 (337)
Q Consensus       202 ~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L-~~~gI~v  278 (337)
                      .+++...+.... ....++.++...++.+.+.+.+.+.  |+++... ..+..+++++...+.+..++.+.| +++||.+
T Consensus       244 ~~~a~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p-~gg~~~~~~l~~~~~~~~~~~~~Ll~~~gv~v  321 (361)
T d1d2fa_         244 ALTAHIAAYQQG-APWLDALRIYLKDNLTYIADKMNAAFPELNWQIP-QSTYLAWLDLRPLNIDDNALQKALIEQEKVAI  321 (361)
T ss_dssp             HHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCCCC-SBCSEEEEECGGGCCCHHHHHHHHHHTTCEEC
T ss_pred             hHHHHHHHhhcc-chhhhcccccchhhHHHHHHHhhhhccccccccc-CceeEEEEEccCCCCCHHHHHHHHHHhCCEEE
Confidence            666544444332 3344677777888888888887763  5554432 225567889987777888888775 5689999


Q ss_pred             cc
Q psy10669        279 NK  280 (337)
Q Consensus       279 ~~  280 (337)
                      .+
T Consensus       322 ~p  323 (361)
T d1d2fa_         322 MP  323 (361)
T ss_dssp             EE
T ss_pred             Ee
Confidence            75

>d1lc5a_ c.67.1.1 (A:) L-threonine-O-3-phosphate decarboxylase CobD {Salmonella enterica [TaxId: 28901]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: L-threonine-O-3-phosphate decarboxylase CobD
species: Salmonella enterica [TaxId: 28901]

Probab=98.75  E-value=3.5e-07  Score=84.25  Aligned_cols=228  Identities=13%  Similarity=0.064  Sum_probs=137.3

Q ss_pred             eeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCc-hhH
Q psy10669         33 IELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGS-PAN  109 (337)
Q Consensus        33 i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt-~AN  109 (337)
                      |.|-..+|..  ||.+++++...+. .. ..||-.    |.   .+|    ++.++++||.+.    .+|..++|+ ++.
T Consensus        25 idls~~~np~~~p~~~~~a~~~~~~-~~-~~Yp~~----~~---~~L----r~aia~~~~v~~----~~I~~~~g~~~~~   87 (355)
T d1lc5a_          25 LDFSANINPLGMPVSVKRALIDNLD-CI-ERYPDA----DY---FHL----HQALARHHQVPA----SWILAGNGETESI   87 (355)
T ss_dssp             EECSSCCCTTCCCHHHHHHHHHTGG-GG-GSCCCT----TC---HHH----HHHHHHHHTSCG----GGEEEESSHHHHH
T ss_pred             EEccCCCCCCCCCHHHHHHHHHHHH-Hh-ccCCCC----Ch---HHH----HHHHHHHhCCCH----HHEEecccHHHHH
Confidence            5555556766  8999999976532 21 122211    11   234    357788999987    368888885 556


Q ss_pred             HHHHHhhCCc--------------------------------------cc---c--cccEEEEc-Ccc-cccccChHH--
Q psy10669        110 FAVCEKALPT--------------------------------------NN---A--RFDFLSSG-TTC-YSRCLDYAR--  142 (337)
Q Consensus       110 ~~v~~aLl~~--------------------------------------~~---a--~pklII~~-~S~-~~~~~d~~~--  142 (337)
                      ..++.++.++                                      +.   .  ++|+|++. +.+ .+...+.++  
T Consensus        88 ~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~l~nP~NPtG~~~~~e~l~  167 (355)
T d1lc5a_          88 FTVASGLKPRRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQLTDAILEALTPDLDCLFLCTPNNPTGLLPERPLLQ  167 (355)
T ss_dssp             HHHHHHHCCSEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCTTHHHHCCTTCCEEEEESSCTTTCCCCCHHHHH
T ss_pred             HHHHhhhccccccccCCccceeccccccccccceeeeeeccCCccceeeeeeccccccceeeeecccCcccccchhhhhh
Confidence            6666665443                                      00   1  26776665 433 356666555  


Q ss_pred             -HHHHhhhcCCeEEEeccccccccc--------------eeeeec-c-------CCchhhh--h-HHHHHhhccCCCCCC
Q psy10669        143 -FRQICDETDSIMFADMSHISGLIA--------------GVKGVT-K-------TGEKILY--D-YEEKINNAVFPSLQG  196 (337)
Q Consensus       143 -l~eia~~~ga~l~vD~AH~~Gli~--------------g~~~T~-~-------~Gg~i~~--~-l~~~i~~~~~p~~~g  196 (337)
                       |.++|+++++++++|+++.--...              .+..+. |       +.|++++  + +.+.++...-|.   
T Consensus       168 ~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~GlR~G~~i~~~~~~~~~~~~~~~~~---  244 (355)
T d1lc5a_         168 AIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMARMRRQQMPW---  244 (355)
T ss_dssp             HHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCCHHHHHHHHHHSCTT---
T ss_pred             hhhhhccccccccccccceeeeeeecccccccccccccceeecccccccccccccccceeccchhhhHHHHhhcCCc---
Confidence             556778999999999998642222              122222 2       2366654  3 445555443332   


Q ss_pred             CCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcC
Q psy10669        197 GPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIA  275 (337)
Q Consensus       197 ~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~g  275 (337)
                      +.+.....+...++..  ...+.+.++++.++.+++.+.|.+. |+.+..  +....+++++..   +..++.+.|.+.|
T Consensus       245 ~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p--~~~~f~~~~~~~---~~~~~~~~L~~~g  317 (355)
T d1lc5a_         245 SVNALAALAGEVALQD--SAWQQATWHWLREEGARFYQALCQLPLLTVYP--GRANYLLLRCER---EDIDLQRRLLTQR  317 (355)
T ss_dssp             CSCHHHHHHHHHGGGC--HHHHHHHHHHHHHHHHHHHHHHHTSTTEEECC--CSSSEEEEEESC---TTCCHHHHHHTTT
T ss_pred             cccccccccccccccc--cchhHHHHHHHHHHHHHHHHHHhhcCCcEECC--CCCEEEEEECCC---CHHHHHHHHHHCC
Confidence            2333333333333322  1345677888889999999999985 777654  556677888764   3455777788889


Q ss_pred             ceeccCc--------ccchh
Q psy10669        276 IACNKNT--------GISLA  287 (337)
Q Consensus       276 I~v~~~~--------girig  287 (337)
                      |.+.+-.        .|||+
T Consensus       318 v~vr~~~~f~~~~~~~iRis  337 (355)
T d1lc5a_         318 ILIRSCANYPGLDSRYYRVA  337 (355)
T ss_dssp             EECEECTTSTTCCTTEEEEE
T ss_pred             cEEEeCccCCCCCCCEEEEE
Confidence            9997533        57775

>d1js3a_ c.67.1.6 (A:) DOPA decarboxylase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: DOPA decarboxylase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.72  E-value=4.9e-07  Score=87.58  Aligned_cols=201  Identities=14%  Similarity=0.083  Sum_probs=120.7

Q ss_pred             cchHHHHHHHHHHHHHhhcCCCCC------CCcceeecCCCchhHHHHHHhhC--------------------Cc-----
Q psy10669         71 NQFIDEIEIVAQQRSLKAFNLDPE------QWGCNVQPYSGSPANFAVCEKAL--------------------PT-----  119 (337)
Q Consensus        71 ~~~~~~lE~~~~~~~a~lfg~~~~------~~~~~v~~~Sgt~AN~~v~~aLl--------------------~~-----  119 (337)
                      +....++|..+.+-++++||.+..      .+|..+..++||.||+..+.+--                    ++     
T Consensus       108 sp~~t~iE~~v~~wl~~l~g~p~~~~~~~~~~~~G~~~~Ggs~anl~al~~AR~~~~~~~~~~~~g~~~~~~~~~~vv~~  187 (476)
T d1js3a_         108 SPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEKLVAYA  187 (476)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHEEEEE
T ss_pred             hhhHHHHHHHHHHHHHHHhCCCcccccCCCCCCCceECCcHHHHHHHHHHHHHHHHHHhhcccccCcccccccCceEEEe
Confidence            344578999999999999998642      12223555666999977764320                    00     


Q ss_pred             ---------------------------------c----c----c--c-ccEEEEc--CcccccccChHHHHHHhhhcCCe
Q psy10669        120 ---------------------------------N----N----A--R-FDFLSSG--TTCYSRCLDYARFRQICDETDSI  153 (337)
Q Consensus       120 ---------------------------------~----~----a--~-pklII~~--~S~~~~~~d~~~l~eia~~~ga~  153 (337)
                                                       .    +    +  + |-+||++  .+..+..-|+++|.+||+++|++
T Consensus       188 s~~~H~Si~ka~~~lGl~~~~v~~d~~~~md~~~L~~~i~~~~~~g~~p~~VvataGtt~~G~iDpl~~I~~i~~~~~~w  267 (476)
T d1js3a_         188 SDQAHSSVERAGLIGGVKLKAIPSDGKFAMRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHEEDIW  267 (476)
T ss_dssp             ETTCCHHHHHHHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCE
T ss_pred             cccccHHHHHHHHhcCceEEEeccCCCCCcCHHHHHHHHHHHHhcCCCcEEEeecCCCccceeeccHHHHHHHHHhcCcE
Confidence                                             0    0    1  1 5566665  33467999999999999999999


Q ss_pred             EEEeccccccccc---------e------eeeeccC-------Cchhhh-h---HHH-------HH---hh--ccC----
Q psy10669        154 MFADMSHISGLIA---------G------VKGVTKT-------GEKILY-D---YEE-------KI---NN--AVF----  191 (337)
Q Consensus       154 l~vD~AH~~Gli~---------g------~~~T~~~-------Gg~i~~-~---l~~-------~i---~~--~~~----  191 (337)
                      |.||+||+..+..         |      ++...||       +|+++. +   +..       .+   ..  ...    
T Consensus       268 lHVDAA~Gg~~~~~~~~~~~~~gi~~aDSit~d~HK~l~~P~~~g~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (476)
T d1js3a_         268 LHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNFDCSAMWVKRRTDLTGAFKLDPVYLKHSHQGSGLITDYR  347 (476)
T ss_dssp             EEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESCHHHHHGGGC------------CCSCCCGG
T ss_pred             EEEecccchhhhhhcchhhhhcCCcccceeeecCccccccCCcceeecccchHHHHHHHhcChhhhcccccccccccccc
Confidence            9999998776655         1      1211122       233332 2   111       00   00  000    


Q ss_pred             -CCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCCCcch--HHH
Q psy10669        192 -PSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKNKLTG--SKV  267 (337)
Q Consensus       192 -p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~~~~~--~~~  267 (337)
                       -.++++-...+ ..+..+++.+-...+.++.++.++++++|++.|.+. +|+++.. .+..+  |.++-.+.+.  ..+
T Consensus       348 ~~~~~~sr~~~a-l~lw~~l~~~G~~g~~~~i~~~~~lA~~l~~~l~~~~~fel~~~-p~l~i--V~Fr~~~~d~~n~~l  423 (476)
T d1js3a_         348 HWQLPLGRRFRS-LKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQDPRFEVCAE-VTLGL--VCFRLKGSDGLNEAL  423 (476)
T ss_dssp             GSSSCSCCCCTH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEECSC-CCSSE--EEEEESSCHHHHHHH
T ss_pred             ccccccchhhHH-HHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhcCCCeEEECC-CceEE--EEEEccCChHHHHHH
Confidence             11223333333 345566777666788999999999999999999984 9999852 33344  4454333222  334


Q ss_pred             HHHHhhcC
Q psy10669        268 ELVLEEIA  275 (337)
Q Consensus       268 ~~~L~~~g  275 (337)
                      .++|.+.|
T Consensus       424 ~~~l~~~G  431 (476)
T d1js3a_         424 LERINSAR  431 (476)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHhcC
Confidence            44555445

>d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=98.66  E-value=2e-06  Score=79.78  Aligned_cols=252  Identities=15%  Similarity=0.061  Sum_probs=139.2

Q ss_pred             HHHHHHHHHHHhhcccceeeeccCC--CCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCC--
Q psy10669         16 PELYSLIKKEKHRQINGIELIASEN--FTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNL--   91 (337)
Q Consensus        16 ~~~~~~~~~e~~rq~~~i~l~asen--~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~--   91 (337)
                      ++|.++...-..+ ++-|+|-..++  -.|+.|++++...+.+.. .+|+..   .|....  -|.++ +.+.+..+.  
T Consensus        12 s~ir~~~~~~~~~-~dvi~l~~g~p~~~~p~~v~~~~~~a~~~~~-~~Y~~~---~G~~~l--r~aia-~~~~~~~~~~~   83 (388)
T d1gdea_          12 SEIRKLFDIAAGM-KDVISLGIGEPDFDTPQHIKEYAKEALDKGL-THYGPN---IGLLEL--REAIA-EKLKKQNGIEA   83 (388)
T ss_dssp             CHHHHHHHHHHHC-TTCEECCCCSCCSCCCHHHHHHHHHHHHTTC-CSCCCT---TCCHHH--HHHHH-HHHHHHHCCCC
T ss_pred             cHHHHHHHHHhCC-CCeEECCCCCCCCCCCHHHHHHHHHHHhcCc-cCCCCC---cCCHHH--HHHHH-HHHHhhccccC
Confidence            5666666543333 45677776665  348999999987655421 233221   122222  11112 222222332  


Q ss_pred             CCCCCcceeecCCC-chhHHHHHHhhCCc-----------------------------------------cc--c---cc
Q psy10669         92 DPEQWGCNVQPYSG-SPANFAVCEKALPT-----------------------------------------NN--A---RF  124 (337)
Q Consensus        92 ~~~~~~~~v~~~Sg-t~AN~~v~~aLl~~-----------------------------------------~~--a---~p  124 (337)
                      ..+   .+|.+++| +++...++.+++++                                         ++  +   ++
T Consensus        84 ~~~---~~i~~t~G~~~~l~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~  160 (388)
T d1gdea_          84 DPK---TEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDELKKYVTDKT  160 (388)
T ss_dssp             CTT---TSEEEESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCHHHHHHHCCTTE
T ss_pred             CCh---heeeeccCcchHHHHHHHHhcCCCCEEEECCCCcHHHHHHHHHcCCEEEEeecccccCCCCCHHHHHHhCccCC
Confidence            121   25777777 57777778888765                                         10  1   25


Q ss_pred             cEEEEc-Ccc-cccccChH---HHHHHhhhcCCeEEEeccccccccc-----------------eeeeec-c-------C
Q psy10669        125 DFLSSG-TTC-YSRCLDYA---RFRQICDETDSIMFADMSHISGLIA-----------------GVKGVT-K-------T  174 (337)
Q Consensus       125 klII~~-~S~-~~~~~d~~---~l~eia~~~ga~l~vD~AH~~Gli~-----------------g~~~T~-~-------~  174 (337)
                      +++++. +.+ .++..+-+   +|.++|+++|++++.|++|.--...                 .+.++. |       +
T Consensus       161 ~~i~~~~P~NPtG~~~s~~~~~~l~~~a~~~~~~vi~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR  240 (388)
T d1gdea_         161 RALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWR  240 (388)
T ss_dssp             EEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGGC
T ss_pred             eEEEECCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEEcCChhhhhccCCCCChhhccCCCCeEEEEeCChhhccCcccc
Confidence            555554 443 24555544   4667889999999999998642221                 122232 2       2


Q ss_pred             Cchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHh-chhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCe
Q psy10669        175 GEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQ-SDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVH  251 (337)
Q Consensus       175 Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~-~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h  251 (337)
                      -|++++  ++.+.+......... ++..+...+.+.++..-. .......++...++.+.+.+.|.+.++....+ ..+-
T Consensus       241 ~G~ii~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p-~gg~  318 (388)
T d1gdea_         241 LGFVAAPSWIIERMVKFQMYNAT-CPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEMGLPTVKP-KGAF  318 (388)
T ss_dssp             CEEEECCHHHHHHHHHHHHTTTC-SCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCC-CBTT
T ss_pred             EEEEEeeccchhhhhhccccccc-cccccchhhHHHHHhhccchhHHHHHHHHHHHhhhhhhhhhhhccccccCC-CceE
Confidence            255554  454444433222222 333344444444432110 12234556666777888888888888876542 3344


Q ss_pred             EEEEEecCCCcchHHHHHH-HhhcCceecc
Q psy10669        252 LILIDLRKNKLTGSKVELV-LEEIAIACNK  280 (337)
Q Consensus       252 ~v~V~~~~~~~~~~~~~~~-L~~~gI~v~~  280 (337)
                      .+++++...+.+..++.+. |++.||.+.+
T Consensus       319 fl~~~l~~~~~~~~~~~~~ll~e~gV~v~P  348 (388)
T d1gdea_         319 YIFPRIRDTGLTSKKFSELMLKEARVAVVP  348 (388)
T ss_dssp             EECCBCGGGTCCHHHHHHHHHHHTCEECEE
T ss_pred             EEEEECCCCCCCHHHHHHHHHHhCCEEEEe
Confidence            6788888767777776655 5678999875

>d1y4ia1 c.67.1.3 (A:2-398) Methionine gamma-lyase, MGL {Citrobacter freundii [TaxId: 546]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Citrobacter freundii [TaxId: 546]

Probab=98.60  E-value=3.1e-07  Score=86.90  Aligned_cols=189  Identities=14%  Similarity=0.105  Sum_probs=125.0

Q ss_pred             eeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHH
Q psy10669         34 ELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVC  113 (337)
Q Consensus        34 ~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~  113 (337)
                      .+..|-.|..+...+... .+..+ ..|+.-+|.  ||...+.+|    ++++++-|.+.     ++.+.||..|..+++
T Consensus        29 PI~~sST~~~~~~~~~~~-~~~~~-~~~~~Y~R~--~nPT~~~LE----~~la~LEgg~~-----a~~~sSGmaAi~~~l   95 (397)
T d1y4ia1          29 PIFQTSTFVFDSAEQGAA-RFALE-ESGYIYTRL--GNPTTDALE----KKLAVLERGEA-----GLATASGISAITTTL   95 (397)
T ss_dssp             CCCCCSCCCCSSHHHHHH-HHHSC-SSSSCCCTT--SCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHH
T ss_pred             CccCCCCeeeCCHHHHHH-hhcCC-cCCceeeCC--CCHHHHHHH----HHHHHHhCCcc-----ceeehHHHHHHHHHH
Confidence            467777777554433322 22222 124444454  778888999    58899999985     799999999998889


Q ss_pred             HhhCCc----------------------------------------ccc---cccEEEEc-Cccc-ccccChHHHHHHhh
Q psy10669        114 EKALPT----------------------------------------NNA---RFDFLSSG-TTCY-SRCLDYARFRQICD  148 (337)
Q Consensus       114 ~aLl~~----------------------------------------~~a---~pklII~~-~S~~-~~~~d~~~l~eia~  148 (337)
                      .+++++                                        +.+   ++|+|.+. +++- ....|++.+.+||+
T Consensus        96 ~~ll~~Gd~vi~~~~~Yg~t~~~~~~~l~~~Gi~~~~vd~~d~~~~~~~i~~~Tklv~~Esp~NP~l~v~Di~~i~~iA~  175 (397)
T d1y4ia1          96 LTLCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAGKPEEIRAAMRPETKVVYIETPANPTLSLVDIETVAGIAH  175 (397)
T ss_dssp             HHHCCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTTSHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred             hhccCCCCeeeeecccccccchhhhcccCCCceEeeccCCCCHHHHHHhcCCCCcEEEecCCcccceeecccHHHHHHhh
Confidence            999876                                        111   26899887 4442 48899999999999


Q ss_pred             hcCCeEEEeccccccccc-----e----eeeecc--------CCchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHH
Q psy10669        149 ETDSIMFADMSHISGLIA-----G----VKGVTK--------TGEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATA  209 (337)
Q Consensus       149 ~~ga~l~vD~AH~~Gli~-----g----~~~T~~--------~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a  209 (337)
                      ++|++++||-+-...+.-     |    +.|++|        .||.+++  +...++.....-.+.|+...|.-|.+.. 
T Consensus       176 ~~gi~~vvDnT~atP~~~~Pl~~GaDivihS~TKyi~Ghsdvl~G~v~~~~~~~~~~r~~~~~~~~G~~l~p~~a~l~~-  254 (397)
T d1y4ia1         176 QQGALLVVDNTFMSPYCQQPLQLGADIVVHSVTKYINGHGDVIGGIIVGKQEFIDQARFVGLKDITGGCMSPFNAWLTL-  254 (397)
T ss_dssp             HTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTHHHHTTCCCCCHHHHHHHH-
T ss_pred             cCCceEEecCcccCcccCcchhcCCCEEEEehhhhcCCCcceeeeccCCCHHHHHHHHHHHHHhCcCCcCCHHHHHHHH-
Confidence            999999999997776655     2    344433        3666665  3333222110111234444444444332 


Q ss_pred             HHHHhchhhHHHHHHHHHHHHHHHHHHHhC
Q psy10669        210 MLQAQSDEFKSYQAQVKANASHLSDEMIKR  239 (337)
Q Consensus       210 ~~e~~~~~~~~y~~~v~~na~~l~~~L~~~  239 (337)
                       .-+  +...-++++-.+||..+++.|++.
T Consensus       255 -rgl--~TL~lRm~~~~~nA~~lA~~L~~h  281 (397)
T d1y4ia1         255 -RGV--KTLGIRMERHCENALKIARFLEGH  281 (397)
T ss_dssp             -HHH--TTHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             -cCc--CcHHHHHHHHHHHHHHHHHHHHhC
Confidence             333  246788999999999999999984

>d1j32a_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Phormidium lapideum [TaxId: 32060]

Probab=98.59  E-value=2.1e-06  Score=80.27  Aligned_cols=245  Identities=13%  Similarity=0.042  Sum_probs=139.0

Q ss_pred             cceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-ch
Q psy10669         31 NGIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SP  107 (337)
Q Consensus        31 ~~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~  107 (337)
                      +-|+|-..+.-.  ||.+++++...+.+.+ .+|+.   -.|....-  +..+ +.+.+.+|..-..  -+|..++| ++
T Consensus        31 ~vi~l~~G~p~~~~p~~v~~a~~~~~~~~~-~~Y~~---~~G~~~lR--~aia-~~~~~~~g~~~~~--~~i~it~G~~~  101 (388)
T d1j32a_          31 DVCSFSAGEPDFNTPKHIVEAAKAALEQGK-TRYGP---AAGEPRLR--EAIA-QKLQRDNGLCYGA--DNILVTNGGKQ  101 (388)
T ss_dssp             CCEECCCSSCSSCCCHHHHHHHHHHHHTTC-CSCCC---TTCCHHHH--HHHH-HHHHHHHCCCCCG--GGEEEESHHHH
T ss_pred             CeEECCCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC---CCCCHHHH--HHHH-HHHHHhcccCCCC--ceEEEcCCHHH
Confidence            446665444322  7999999977654321 12221   12332221  1111 3445556654221  25888888 57


Q ss_pred             hHHHHHHhhCCc-------------------------------------------ccc---cccEEE-EcCcc-cccccC
Q psy10669        108 ANFAVCEKALPT-------------------------------------------NNA---RFDFLS-SGTTC-YSRCLD  139 (337)
Q Consensus       108 AN~~v~~aLl~~-------------------------------------------~~a---~pklII-~~~S~-~~~~~d  139 (337)
                      |...++.+++++                                           +.+   ++++++ +++++ -+...+
T Consensus       102 al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~~~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~~~P~NPTG~~~~  181 (388)
T d1j32a_         102 SIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAITPKTKLLVFNTPSNPTGMVYT  181 (388)
T ss_dssp             HHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCC
T ss_pred             HHHHHHHHHhCCCCEEEEcCCCcHHHHHHHHHhcCeEEEEecccccccCCCHHHHHHhCCCCCeEEEECCCCCCCCcccc
Confidence            887778888764                                           001   145555 44543 246677


Q ss_pred             hHHHH---HHhhhcCCeEEEeccccccccc------------------eeeeec-c-------CCchhhh--hHHHHHhh
Q psy10669        140 YARFR---QICDETDSIMFADMSHISGLIA------------------GVKGVT-K-------TGEKILY--DYEEKINN  188 (337)
Q Consensus       140 ~~~l~---eia~~~ga~l~vD~AH~~Gli~------------------g~~~T~-~-------~Gg~i~~--~l~~~i~~  188 (337)
                      .+++.   ++|+++|+++++|+++.--...                  .+..+. |       +-|+++.  ++.+.+..
T Consensus       182 ~~~~~~l~~~~~~~~~~iI~De~Y~~~~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~GlRvG~~~~~~~~~~~~~~  261 (388)
T d1j32a_         182 PDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGPVPLVKAATK  261 (388)
T ss_dssp             HHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCEEEECCHHHHHHHHH
T ss_pred             hhhhhhhhcccccCCeEEEchhhhhcccccCCCCCCHHHhCcccccceeEecCChhhhhcchhHeEEEEECHHHHHHHHH
Confidence            66655   6689999999999998543332                  012222 2       2366655  45444332


Q ss_pred             ccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCCCeEEEEEecCCCcchHHH
Q psy10669        189 AVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYHVVTGGTDVHLILIDLRKNKLTGSKV  267 (337)
Q Consensus       189 ~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~v~~~~t~~h~v~V~~~~~~~~~~~~  267 (337)
                      ... ....++......+....+... ....++.++.+.++.+.+.+.|.+. |+++... ..+-.+++++...+.+..++
T Consensus       262 ~~~-~~~~~~~~~~q~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~p-~gg~~l~~~l~~~~~~~~~~  338 (388)
T d1j32a_         262 IQG-HSTSNVCTFAQYGAIAAYENS-QDCVQEMLAAFAERRRYMLDALNAMPGLECPKP-DGAFYMFPSIAKTGRSSLDF  338 (388)
T ss_dssp             HHH-TTTCSCCHHHHHHHHHHHHSC-SHHHHHHHHHHHHHHHHHHHHHHTCTTCBCCCC-CBTTEECCBCGGGTCCHHHH
T ss_pred             hhh-hccccccHHHHHHHhhcccch-HHHHHHHHHHHHHHHHHHHHHHHhCCCCEecCC-CceEEEEEECCCCCCCHHHH
Confidence            211 112244445544444444332 3345677888889999999999885 7776542 33556778887666666665


Q ss_pred             H-HHHhhcCceeccCc------ccchh
Q psy10669        268 E-LVLEEIAIACNKNT------GISLA  287 (337)
Q Consensus       268 ~-~~L~~~gI~v~~~~------girig  287 (337)
                      . ++|+++||.+.+-.      .+||+
T Consensus       339 ~~~ll~~~gV~v~pG~~F~~~~~~Rls  365 (388)
T d1j32a_         339 CSELLDQHQVATVPGAAFGADDCIRLS  365 (388)
T ss_dssp             HHHHHHHHCEECEEGGGGTCTTBEEEE
T ss_pred             HHHHHHhCCEEEEeccccCCCCeEEEE
Confidence            4 45567899997633      46665

>d1ibja_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine beta-lyase, CBL
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.56  E-value=5.1e-07  Score=85.01  Aligned_cols=154  Identities=14%  Similarity=0.108  Sum_probs=106.5

Q ss_pred             ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669         70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------  119 (337)
Q Consensus        70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------  119 (337)
                      |+...+.+|    ++++++-|++.     ++.|.||..|..+ +.+++++                              
T Consensus        47 ~nPt~~~le----~~la~LE~~~~-----a~~fsSGMaAisa-ll~ll~~Gd~vv~~~~~Yg~t~~l~~~~~~~~gi~~~  116 (380)
T d1ibja_          47 GNPTRDALE----SLLAKLDKADR-----AFCFTSGMAALSA-VTHLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVK  116 (380)
T ss_dssp             CCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHH-HHTTSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEE
T ss_pred             CChHHHHHH----HHHHHHcCCce-----EEehhhHHHHHHH-HHHhhCCCCEEEEEecccccccchhhhhhcccccccc
Confidence            677778898    58899999985     6899999988655 5677664                              


Q ss_pred             ----------ccc---cccEEEEc-Ccc-cccccChHHHHHHhhhcCCeEEEeccccccccc-----e----eeeecc--
Q psy10669        120 ----------NNA---RFDFLSSG-TTC-YSRCLDYARFRQICDETDSIMFADMSHISGLIA-----G----VKGVTK--  173 (337)
Q Consensus       120 ----------~~a---~pklII~~-~S~-~~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----g----~~~T~~--  173 (337)
                                +.+   ++|+|++. .|+ .....|+++|+++|+++|++++||.+...++.-     |    +.|++|  
T Consensus       117 ~~d~~~~~~~~~ai~~~t~li~~EtpsNP~l~v~Di~~i~~iA~~~g~~~vVDnT~atP~~~~Pl~~GaDiVvhS~TKyi  196 (380)
T d1ibja_         117 RVNTTKLDEVAAAIGPQTKLVWLESPTNPRQQISDIRKISEMAHAQGALVLVDNSIMSPVLSRPLELGADIVMHSATKFI  196 (380)
T ss_dssp             EECTTSHHHHHHHCCSSEEEEEECSSCTTTCCCCCHHHHHHHHHTTTCEEEEECTTTCTTTCCGGGTTCSEEEEETTTTT
T ss_pred             ccCcchHHHHHHHhccCccEEEeccccccccccccHHHHHHHHHHcCCeEEeeccccccccccccccCCCEEEeccccee
Confidence                      111   26899987 444 348999999999999999999999998877765     2    344443  


Q ss_pred             ------CCchhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC
Q psy10669        174 ------TGEKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR  239 (337)
Q Consensus       174 ------~Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~  239 (337)
                            .||.++.   ++.+++....  ...|+...|.-|.+.  ++-+  ..+..++++..+||..+++.|++.
T Consensus       197 ~GhsDv~~G~v~~~~~~~~~~~~~~~--~~~G~~l~p~~a~ll--~rgl--~Tl~lRm~~~~~nA~~lA~~L~~h  265 (380)
T d1ibja_         197 AGHSDVMAGVLAVKGEKLAKEVYFLQ--NSEGSGLAPFDCWLC--LRGI--KTMALRIEKQQENARKIAMYLSSH  265 (380)
T ss_dssp             TCSSCCCCEEEEECSHHHHHHHHHHH--HHTTCBCCHHHHHHH--HHHH--TTHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             ccccCccccccccchhhHHHHHHhhc--cccCCcCCHHHHHHH--Hhcc--hhhhhhHHHHHHHHHHHHHHHHhC
Confidence                  2555543   3445444321  112333333333322  2233  357889999999999999999983

>d1gc0a_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Pseudomonas putida [TaxId: 303]

Probab=98.55  E-value=1.7e-07  Score=88.63  Aligned_cols=189  Identities=16%  Similarity=0.127  Sum_probs=116.6

Q ss_pred             eeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHH
Q psy10669         34 ELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVC  113 (337)
Q Consensus        34 ~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~  113 (337)
                      .+..|-.|..+...+... .+..+ ..|+.-+|.  |+...+.+|    ++++++-|.+.     ++.|.||..|..+++
T Consensus        25 PI~~ssT~~f~~~~~~~~-~~~~~-~~~~~Y~R~--~nPT~~~LE----~~la~LEg~~~-----a~~~~SGmaAi~~~l   91 (392)
T d1gc0a_          25 PVYQTATFTFPTVEYGAA-CFAGE-QAGHFYSRI--SNPTLNLLE----ARMASLEGGEA-----GLALASGMGAITSTL   91 (392)
T ss_dssp             CBCCCSCBCCC-------------------------CCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHH
T ss_pred             CccCCCCEeeCCHHHHHH-hhcCC-cCCceecCC--CChHHHHHH----HHHHHHhCCcc-----eeehhhHHHHHHHHH
Confidence            456677777554433221 11212 122322333  677788999    58899999985     799999999999999


Q ss_pred             HhhCCc----------------------------------------ccc---cccEEEEc-Ccc-cccccChHHHHHHhh
Q psy10669        114 EKALPT----------------------------------------NNA---RFDFLSSG-TTC-YSRCLDYARFRQICD  148 (337)
Q Consensus       114 ~aLl~~----------------------------------------~~a---~pklII~~-~S~-~~~~~d~~~l~eia~  148 (337)
                      .+++++                                        +.+   ++|+|.+. +++ .....|++.|.+||+
T Consensus        92 ~~l~~~Gd~vl~~~~~Yg~t~~l~~~~~~~~Gi~~~~~d~~d~~~~~~ai~~~t~lv~~Esp~NP~l~v~Di~~i~~ia~  171 (392)
T d1gc0a_          92 WTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDMADLQALEAAMTPATRVIYFESPANPNMHMADIAGVAKIAR  171 (392)
T ss_dssp             HHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEECTTCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHG
T ss_pred             HhhccCCCeeecccccchhhhhhhhhhhccCCcccccCCccCHHHHHHhCCCCCeEEEecccccceeeecchHHHHHHHH
Confidence            999875                                        111   26888886 444 348999999999999


Q ss_pred             hcCCeEEEeccccccccc-----e----eeeecc--------CCchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHH
Q psy10669        149 ETDSIMFADMSHISGLIA-----G----VKGVTK--------TGEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATA  209 (337)
Q Consensus       149 ~~ga~l~vD~AH~~Gli~-----g----~~~T~~--------~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a  209 (337)
                      ++|++++||-+...++.-     |    +.|++|        .||.+++  ++..+++....-...|+...|.-|.+.  
T Consensus       172 ~~g~~~vvDnT~atP~~~~Pl~~GaDivihS~TKyi~Ghsd~~~G~v~~~~~~~~~~r~~~~~~~~G~~~~p~da~ll--  249 (392)
T d1gc0a_         172 KHGATVVVDNTYCTPYLQRPLELGADLVVHSATKYLSGHGDITAGIVVGSQALVDRIRLQGLKDMTGAVLSPHDAALL--  249 (392)
T ss_dssp             GGTCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECHHHHHHHHHTHHHHHTCCCCCHHHHHHH--
T ss_pred             hcCCEEEEecCccCccccChHHhCCCEEEEecceeecCCcccccccccchhHHHHHHHHHHHHHccCCcCChhhHHHH--
Confidence            999999999999888775     2    345443        2566654  333333211011112333334333332  


Q ss_pred             HHHHhchhhHHHHHHHHHHHHHHHHHHHhC
Q psy10669        210 MLQAQSDEFKSYQAQVKANASHLSDEMIKR  239 (337)
Q Consensus       210 ~~e~~~~~~~~y~~~v~~na~~l~~~L~~~  239 (337)
                      +.-+  ..+..++++..+||..+++.|++.
T Consensus       250 ~rgl--~TL~lRm~~~~~nA~~lA~~L~~h  277 (392)
T d1gc0a_         250 MRGI--KTLNLRMDRHCANAQVLAEFLARQ  277 (392)
T ss_dssp             HHHH--TTHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             Hhcc--ccHHHHHHHHHHHHHHHHHHHHhC
Confidence            2333  357889999999999999999983

>d1cs1a_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-synthase, CGS
species: Escherichia coli [TaxId: 562]

Probab=98.50  E-value=1.1e-06  Score=82.60  Aligned_cols=155  Identities=14%  Similarity=0.098  Sum_probs=108.5

Q ss_pred             ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669         70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------  119 (337)
Q Consensus        70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------  119 (337)
                      ||.....+|    ++++++-|.+.     ++.|.||..|..+++.+++++                              
T Consensus        48 ~nPt~~~le----~~la~LEgg~~-----a~~~sSGMaAi~~~l~~l~~~gd~vv~~~~~yg~t~~~~~~~~~~~g~~~~  118 (384)
T d1cs1a_          48 GNPTRDVVQ----RALAELEGGAG-----AVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVL  118 (384)
T ss_dssp             CCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEE
T ss_pred             CCHHHHHHH----HHHHHHhCCCc-----eEEecChHHHHHHHHhhcccccceecccccccchhhhhhhhhhcccccccc
Confidence            677788899    58899999885     799999999988888999875                              


Q ss_pred             ----------ccc---cccEEEEc-Cccc-ccccChHHHHHHhhhcCCeEEEeccccccccc-----e----eeeecc--
Q psy10669        120 ----------NNA---RFDFLSSG-TTCY-SRCLDYARFRQICDETDSIMFADMSHISGLIA-----G----VKGVTK--  173 (337)
Q Consensus       120 ----------~~a---~pklII~~-~S~~-~~~~d~~~l~eia~~~ga~l~vD~AH~~Gli~-----g----~~~T~~--  173 (337)
                                +.+   ++|+|.+. +|+- ....|++++.+||+++|++++||-+-.+++.-     |    +.|++|  
T Consensus       119 ~~d~~d~~~~~~~~~~~t~~v~~EspsNP~l~v~Di~~i~~ia~~~g~~~vVDNT~atP~~~~Pl~~GaDiVvhS~TKyi  198 (384)
T d1cs1a_         119 FVDQGDEQALRAALAEKPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPALQNPLALGADLVLHSCTKYL  198 (384)
T ss_dssp             EECTTCHHHHHHHHHTCCSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTT
T ss_pred             cccCCCHHHHHhhccccccEEEEeccccccceeccHHHHhhhhhhcCcEEEEeccccCcccccccccCCCEEEEcccccc
Confidence                      111   27899997 4443 48899999999999999999999998877665     2    345443  


Q ss_pred             ------CCchhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC
Q psy10669        174 ------TGEKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR  239 (337)
Q Consensus       174 ------~Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~  239 (337)
                            .||.++.   ++.+++.....  ..|....|.-|.+  .+.-+  ..+..++++..+||..+++.|+..
T Consensus       199 ~Ghsdv~~G~vv~~~~~~~~~~~~~~~--~~G~~~~p~~a~l--l~rgL--~TL~lRm~~~~~nA~~lA~~L~~h  267 (384)
T d1cs1a_         199 NGHSDVVAGVVIAKDPDVVTELAWWAN--NIGVTGGAFDSYL--LLRGL--RTLVPRMELAQRNAQAIVKYLQTQ  267 (384)
T ss_dssp             TCSSCCCCEEEEESSHHHHHHHHHHHH--HHTCBCCHHHHHH--HHHHH--TTHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             ccCCCcccccccCCchhhhhhhhhhhh--hhhhccccccHHH--Hhhcc--chhHHHHHHHHHHHHHHHHhcccC
Confidence                  3665554   23333332110  1222222332322  23333  357789999999999999999983

>d1c7na_ c.67.1.3 (A:) Cystalysin {Treponema denticola [TaxId: 158]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystalysin
species: Treponema denticola [TaxId: 158]

Probab=98.50  E-value=4e-06  Score=78.31  Aligned_cols=250  Identities=14%  Similarity=0.136  Sum_probs=133.1

Q ss_pred             HHHHHHHHhhcc-cceeeeccC-CC-CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCC
Q psy10669         19 YSLIKKEKHRQI-NGIELIASE-NF-TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQ   95 (337)
Q Consensus        19 ~~~~~~e~~rq~-~~i~l~ase-n~-~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~   95 (337)
                      ++.+.++..... +-|+|-..+ ++ .||.|++|+...+.+.. .||     ..|..   +|-+...+.+++.+|.+.+.
T Consensus        19 ~~~~~~~~~~~g~~vi~l~~g~pdf~~p~~v~~al~~~~~~~~-~~Y-----~~g~~---~Lr~aia~~~~~~~g~~~~~   89 (394)
T d1c7na_          19 WDLMYSQNPEVGNEVVPLSVADMEFKNPPELIEGLKKYLDETV-LGY-----TGPTE---EYKKTVKKWMKDRHQWDIQT   89 (394)
T ss_dssp             HHHHHHHCTTCCTTCCCCCSSSCSSCCCHHHHHHHHHHHHHCC-CSS-----BCCCH---HHHHHHHHHHHHHHCCCCCG
T ss_pred             HHHHHHHhHhcCCCeEEccCCCCCCCCCHHHHHHHHHHHhCCC-cCC-----CCCCH---HHHHHHHHHHHHhcCCCCCC
Confidence            455555444443 335554333 23 37999999987654321 233     23332   33322233444555654321


Q ss_pred             CcceeecCCC-chhHHHHHHhhCCc--------------------------------------------cc-c---cccE
Q psy10669         96 WGCNVQPYSG-SPANFAVCEKALPT--------------------------------------------NN-A---RFDF  126 (337)
Q Consensus        96 ~~~~v~~~Sg-t~AN~~v~~aLl~~--------------------------------------------~~-a---~pkl  126 (337)
                        -+|..++| ++|...++.+++++                                            +. .   ++|+
T Consensus        90 --~~I~vt~G~~~al~~~~~~~~~pgd~vi~~~p~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~d~~~~~~~~~~~~~~~  167 (394)
T d1c7na_          90 --DWIINTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKA  167 (394)
T ss_dssp             --GGEEEESSHHHHHHHHHHHHCCTTCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEE
T ss_pred             --cceEeeccchhhhhhhhccccccccccccccCcccchhhHHhhhhhcccccccccccccccchhhhhhhhhccccceE
Confidence              25888888 57888778898765                                            10 1   1566


Q ss_pred             EEEc-Ccc-cccccChHH---HHHHhhhcCCeEEEeccccccccc-----------------ee--eeecc-------C-
Q psy10669        127 LSSG-TTC-YSRCLDYAR---FRQICDETDSIMFADMSHISGLIA-----------------GV--KGVTK-------T-  174 (337)
Q Consensus       127 II~~-~S~-~~~~~d~~~---l~eia~~~ga~l~vD~AH~~Gli~-----------------g~--~~T~~-------~-  174 (337)
                      |++. +.+ -+...+.++   |.++|+++++++++|+++.-=+..                 .+  .|..|       + 
T Consensus       168 i~l~~P~NPTG~v~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~R~  247 (394)
T d1c7na_         168 LLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGM  247 (394)
T ss_dssp             EEEESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCC
T ss_pred             EEecccccccceeccHHHhhhhhccccccceeEeccccccccccCCccccchhhhhcccccceeeccccccccccccccc
Confidence            6665 433 246666665   556788999999999997531111                 01  11112       2 


Q ss_pred             Cchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC--CCEEecCCCCC
Q psy10669        175 GEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR--GYHVVTGGTDV  250 (337)
Q Consensus       175 Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~--G~~v~~~~t~~  250 (337)
                      |+++..  ++.+.+.................++........ ....+++++...++-+.+.+.|+..  |+++.. ..-+
T Consensus       248 g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-p~g~  325 (394)
T d1c7na_         248 SNIIIKNPDIRERFTKSRDATSGMPFTTLGYKACEICYKEC-GKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAPL-IEGT  325 (394)
T ss_dssp             EEEECCCHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHCTTSBCCC-CSBS
T ss_pred             ccccccChhhhhhhhhhhhhccccccccccchhhhhhhcch-hhhhcccccccchhhhhhhhhhhccccceeecC-CCce
Confidence            444433  354444332111112222222333332322222 2233555555666666666666653  555432 1235


Q ss_pred             eEEEEEecCCCcchHHHHHHH-hhcCceeccC
Q psy10669        251 HLILIDLRKNKLTGSKVELVL-EEIAIACNKN  281 (337)
Q Consensus       251 h~v~V~~~~~~~~~~~~~~~L-~~~gI~v~~~  281 (337)
                      ..+++++...+.+..++.+.| +++||.+.+-
T Consensus       326 ~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG  357 (394)
T d1c7na_         326 YLQWIDFRALKMDHKAMEEFMIHKAQIFFDEG  357 (394)
T ss_dssp             SEEEEECGGGCCCHHHHHHHHHHTTCCCCEEG
T ss_pred             eEEEEECCCCCCCHHHHHHHHHHhCCEEEEcc
Confidence            578899987777888776655 6789998763

>d1wsta1 c.67.1.1 (A:13-415) Multiple substrate aminotransferase, MSAT {Thermococcus profundus [TaxId: 49899]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Multiple substrate aminotransferase, MSAT
species: Thermococcus profundus [TaxId: 49899]

Probab=98.50  E-value=7.2e-06  Score=76.39  Aligned_cols=143  Identities=8%  Similarity=-0.027  Sum_probs=78.9

Q ss_pred             ccccChHH---HHHHhhhcCCeEEEeccccccccc----------------eeeeec-c------CCchhhh--hHHHHH
Q psy10669        135 SRCLDYAR---FRQICDETDSIMFADMSHISGLIA----------------GVKGVT-K------TGEKILY--DYEEKI  186 (337)
Q Consensus       135 ~~~~d~~~---l~eia~~~ga~l~vD~AH~~Gli~----------------g~~~T~-~------~Gg~i~~--~l~~~i  186 (337)
                      +...+.++   |.++|++++.+|+.|+++.-=...                .++++. |      +.|+++.  ++.+.+
T Consensus       185 G~~~s~~~l~~i~~~a~~~~~~li~De~y~~l~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G~RiG~~i~~~~~i~~~  264 (403)
T d1wsta1         185 GVTMSVDRRKKLLELANEYDFLIVEDGPYSELRYSGEPTPPIKHFDDYGRVIYLGTFSKILAPGFRIGWVAAHPHLIRKM  264 (403)
T ss_dssp             CCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGGCSSSCEEEEEESTTTTCGGGCCEEEEECHHHHHHH
T ss_pred             CccCCHHHHHHHHHHHHhcCceeccccchhheecCCCCCCcccccCCCCcEEEEccccceecCcccccccccchHHHHHH
Confidence            45666665   556789999999999998521111                122222 2      3466654  444433


Q ss_pred             hhccCCCCCCCCcHHHHHHHHHHHHH-HhchhhHHHHHHHHHHHHHHHHHHHh---CCCEEecCCCCCeEEEEEecCCCc
Q psy10669        187 NNAVFPSLQGGPHNHAIGAIATAMLQ-AQSDEFKSYQAQVKANASHLSDEMIK---RGYHVVTGGTDVHLILIDLRKNKL  262 (337)
Q Consensus       187 ~~~~~p~~~g~~~~~~iaala~a~~e-~~~~~~~~y~~~v~~na~~l~~~L~~---~G~~v~~~~t~~h~v~V~~~~~~~  262 (337)
                      ......... .+......+.+..... ..+...++.++...++.+.+.+.|.+   .|+..... ..+-.+++++.. +.
T Consensus       265 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~p-~gg~~~~~~~~~-~~  341 (403)
T d1wsta1         265 EIAKQSIDL-CTNTFGQAIAWKYVENGYLDEHIPKIIEFYKPRRDAMLEALEEYMPEGVEWTKP-EGGMFVRVTLPE-GI  341 (403)
T ss_dssp             HHHHHHHHS-SCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEECCC-SBSSEEEEECCT-TC
T ss_pred             HHHHhhhcc-ccccchhhhHHhhhhccccchhHHHHHHHHHHHHHHHHHHHHhhccCCeEEeCC-CceeEEEEECCC-CC
Confidence            322111111 2222222222221111 11222355667777777788888877   46666542 334456777754 56


Q ss_pred             chHHHHHHHhhcCceecc
Q psy10669        263 TGSKVELVLEEIAIACNK  280 (337)
Q Consensus       263 ~~~~~~~~L~~~gI~v~~  280 (337)
                      +...+.+.|.+.||.+.+
T Consensus       342 ~~~~~~~~l~~~gV~v~p  359 (403)
T d1wsta1         342 DTKLMMERAVAKGVAYVP  359 (403)
T ss_dssp             CTTTTHHHHHHTTEECEE
T ss_pred             CHHHHHHHHHHCCEEEEe
Confidence            788888889988999864

>d1qgna_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Common tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-synthase, CGS
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=98.49  E-value=7e-07  Score=84.46  Aligned_cols=187  Identities=16%  Similarity=0.195  Sum_probs=125.3

Q ss_pred             eeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHH
Q psy10669         34 ELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVC  113 (337)
Q Consensus        34 ~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~  113 (337)
                      .+..|-.|.-+...+... .+..+ ..|+.-+|.  |+...+.+|    ++++++-|.+.     ++.|.||..|..+++
T Consensus        33 PI~~sst~~~~~~~~~~~-~~~~~-~~~~~Y~R~--~nPt~~~LE----~~la~LEgg~~-----a~~~sSGMaAi~~~l   99 (398)
T d1qgna_          33 PVVNTSAYFFNKTSELID-FKEKR-RASFEYGRY--GNPTTVVLE----EKISALEGAES-----TLLMASGMCASTVML   99 (398)
T ss_dssp             CBCCCSBBCBSSHHHHHH-HHTTS-SCCCCBGGG--CCHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHH
T ss_pred             CeeCCCcEEeCCHHHHHH-HhcCC-cCCceecCC--CChHHHHHH----HHHHHHhCCce-----EEEecCcchHHHHHH
Confidence            567788888665544432 22222 234444443  678888999    58899999885     799999999998889


Q ss_pred             HhhCCc-----------------------------------------ccc---cccEEEEc-Cccc-ccccChHHHHHHh
Q psy10669        114 EKALPT-----------------------------------------NNA---RFDFLSSG-TTCY-SRCLDYARFRQIC  147 (337)
Q Consensus       114 ~aLl~~-----------------------------------------~~a---~pklII~~-~S~~-~~~~d~~~l~eia  147 (337)
                      .+++++                                         +..   ++++|.+. +++- ....|+++|.+||
T Consensus       100 ~~l~~~Gd~iv~~~~~Yg~t~~l~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~t~~v~~EspsNP~l~v~Di~~ia~ia  179 (398)
T d1qgna_         100 LALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDPADVGALELALNQKKVNLFFTESPTNPFLRCVDIELVSKLC  179 (398)
T ss_dssp             HHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECSSCHHHHHHHHHHSCEEEEEEESSCTTTCCCCCHHHHHHHH
T ss_pred             hhcccccccccccccccchhhhhhcccccccccccccccccchhhhhhhhccccceEEEccCccccccccchHHHHHHHH
Confidence            999875                                         001   26788886 4443 4899999999999


Q ss_pred             hhcCCeEEEeccccccccc-----e----eeeecc--------CCchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHH
Q psy10669        148 DETDSIMFADMSHISGLIA-----G----VKGVTK--------TGEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIAT  208 (337)
Q Consensus       148 ~~~ga~l~vD~AH~~Gli~-----g----~~~T~~--------~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~  208 (337)
                      +++|++++||-+-..++.-     |    +.|++|        .||.+..  ++..++...  ....|+...|.-|.+. 
T Consensus       180 ~~~g~~~vVDnT~atP~~~~Pl~~GaDiVihS~TKy~~Ghsdv~~G~v~~~~~~~~~~~~~--~~~~G~~l~p~~a~ll-  256 (398)
T d1qgna_         180 HEKGALVCIDGTFATPLNQKALALGADLVLHSATKFLGGHNDVLAGCISGPLKLVSEIRNL--HHILGGALNPNAAYLI-  256 (398)
T ss_dssp             HHTTCEEEEECTTTCTTTCCTTTTTCSEEEECTTTTTTCSSSCCCEEEEECHHHHHHHHHH--HHHHCCCCCHHHHHHH-
T ss_pred             hhcCCEEEecceeeccccCCchhhCCCEEEEechhhcCcccceeehhhcchhhhhhhhhhh--cccCCCcCCHHHHHHH-
Confidence            9999999999998777765     2    344443        2555543  344433322  1113333334444332 


Q ss_pred             HHHHHhchhhHHHHHHHHHHHHHHHHHHHhC
Q psy10669        209 AMLQAQSDEFKSYQAQVKANASHLSDEMIKR  239 (337)
Q Consensus       209 a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~  239 (337)
                       ++-+  ..+..++++..+||..+++.|++.
T Consensus       257 -~rgl--~TL~lRm~~~~~nA~~lA~~L~~h  284 (398)
T d1qgna_         257 -IRGM--KTLHLRVQQQNSTALRMAEILEAH  284 (398)
T ss_dssp             -HHHG--GGHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             -Hhcc--hHHHHHHHHHHHHHHHHHHHHHhC
Confidence             2333  357789999999999999999983

>d1z7da1 c.67.1.4 (A:7-410) Ornithine aminotransferase {Plasmodium yoelii yoelii [TaxId: 73239]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Plasmodium yoelii yoelii [TaxId: 73239]

Probab=98.46  E-value=2e-06  Score=81.32  Aligned_cols=157  Identities=15%  Similarity=0.133  Sum_probs=90.9

Q ss_pred             cEEEEcCccccc---ccC----hHHHHHHhhhcCCeEEEecccccccc--c--------e----eeeecc--CCchh-hh
Q psy10669        125 DFLSSGTTCYSR---CLD----YARFRQICDETDSIMFADMSHISGLI--A--------G----VKGVTK--TGEKI-LY  180 (337)
Q Consensus       125 klII~~~S~~~~---~~d----~~~l~eia~~~ga~l~vD~AH~~Gli--~--------g----~~~T~~--~Gg~i-~~  180 (337)
                      ..||+.+ ..+.   ..+    ++.|+++|+++|++||+|+.|+ |+-  +        |    +..-+|  .||.+ ++
T Consensus       188 Aavi~EP-i~g~~G~~~~~~~fl~~l~~lc~~~g~llI~DEV~t-GfgRtG~~~~~e~~gv~PDivt~gK~l~gG~~p~~  265 (404)
T d1z7da1         188 CAFIVEP-IQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQT-GLGRTGKLLCVHHYNVKPDVILLGKALSGGHYPIS  265 (404)
T ss_dssp             EEEEECS-SBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSGGGGGTCCCSEEEECGGGGTTSSCCE
T ss_pred             EEEEEEE-EcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCcc-CCCcccccccccccCCCCCEEEEcccccCCCCCcc
Confidence            4677753 4433   222    6889999999999999999995 542  2        1    111122  24432 22


Q ss_pred             ------hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh--CCCEEecC-CCCCe
Q psy10669        181 ------DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK--RGYHVVTG-GTDVH  251 (337)
Q Consensus       181 ------~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~--~G~~v~~~-~t~~h  251 (337)
                            ++.+..++....++++ .|+...|+....+..+.+   +...+++.+..+++.+.|.+  ..++++.. ....-
T Consensus       266 ~v~~~~~i~~~~~~~~~~~T~~-gnpl~~aaa~a~L~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~vrg~Gl  341 (404)
T d1z7da1         266 AVLANDDIMLVIKPGEHGSTYG-GNPLAASICVEALNVLIN---EKLCENAEKLGGPFLENLKRELKDSKIVRDVRGKGL  341 (404)
T ss_dssp             EEEECHHHHTTCCTTCCCCTTT-TCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEETT
T ss_pred             cccchHHHHccCCCCCcCcCCC-CCcchhhhhhhhhhhhhc---chhhhhhccchhHHHHHHHHHHhcCCCeEEEEeeCc
Confidence                  4555555543333343 466666666666666543   24566666667667666655  12222210 00112


Q ss_pred             EEEEEecCCCcchHHHHHHHhhcCceeccCc--ccchh
Q psy10669        252 LILIDLRKNKLTGSKVELVLEEIAIACNKNT--GISLA  287 (337)
Q Consensus       252 ~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~--girig  287 (337)
                      +.-+.+.+......++...|.+.||.+.+..  .|||.
T Consensus       342 ~~~i~~~~~~~~~~~~~~~l~~~Gl~~~~~~~~~ir~~  379 (404)
T d1z7da1         342 LCAIEFKNELVNVLDICLKLKENGLITRDVHDKTIRLT  379 (404)
T ss_dssp             EEEEEECTTTCCHHHHHHHHHHTTEECCEETTTEEEEC
T ss_pred             EEEEEEcCCcccHHHHHHHHHhCCeEEecCCCCEEEEE
Confidence            5557777666567778888888899987533  67775

>d1cl1a_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine beta-lyase, CBL
species: Escherichia coli [TaxId: 562]

Probab=98.38  E-value=1.4e-05  Score=75.12  Aligned_cols=227  Identities=11%  Similarity=0.027  Sum_probs=140.6

Q ss_pred             ceeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHH
Q psy10669         32 GIELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFA  111 (337)
Q Consensus        32 ~i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~  111 (337)
                      .-.+..|..|.-+...+ +...+.++...++.-+|.  |+...+.+|    ++++++=|.+.     ++.|.||..|..+
T Consensus        21 ~pPi~~sst~~f~~~~~-~~~~~~~~~~~~~~Y~R~--~nPt~~~le----~~la~LEg~~~-----a~~~~SGMaAi~~   88 (391)
T d1cl1a_          21 NSVIQRASSLVFDSVEA-KKHATRNRANGELFYGRR--GTLTHFSLQ----QAMCELEGGAG-----CVLFPCGAAAVAN   88 (391)
T ss_dssp             SCCBCCCSCBCCSSHHH-HHHHHHTTTTTCCCCTTT--CCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHH
T ss_pred             cCCeeCCCceeeCCHHH-HHHHhcCCccCceEeECC--CChhHHHHH----HHHHHHhCCcc-----EEEeccccceeee
Confidence            44577788887444332 222223332222333343  677888999    58889999885     7999999999988


Q ss_pred             HHHhhCCc----------------------------------------ccc---cccEEEEc-Cccc-ccccChHHHHHH
Q psy10669        112 VCEKALPT----------------------------------------NNA---RFDFLSSG-TTCY-SRCLDYARFRQI  146 (337)
Q Consensus       112 v~~aLl~~----------------------------------------~~a---~pklII~~-~S~~-~~~~d~~~l~ei  146 (337)
                      ++.+++++                                        +.+   ++++|.+. +++- ....|++.+.++
T Consensus        89 ~l~~l~~~Gd~iv~~~~~Yg~T~~l~~~~l~~~Gi~~~~~d~~d~~~~~~~i~~~t~~i~~EtpsNP~l~v~Di~~i~~~  168 (391)
T d1cl1a_          89 SILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPLIGADIVKHLQPNTKIVFLESPGSITMEVHDVPAIVAA  168 (391)
T ss_dssp             HHHHHCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECTTCGGGGGGTCCTTEEEEEEESSCTTTCCCCCHHHHHHH
T ss_pred             hhhcccCCCCeEEEecccccchhhhhhhcccccccccccccCccccccccccccccceeeecccCcccccccccHHHHHH
Confidence            88999875                                        111   16888886 4443 388999999999


Q ss_pred             hhhc--CCeEEEeccccccccc---------eeeeecc--------CCchhhh--hHHHHHhhccCCCCCCCCcHHHHHH
Q psy10669        147 CDET--DSIMFADMSHISGLIA---------GVKGVTK--------TGEKILY--DYEEKINNAVFPSLQGGPHNHAIGA  205 (337)
Q Consensus       147 a~~~--ga~l~vD~AH~~Gli~---------g~~~T~~--------~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaa  205 (337)
                      |+++  |++++||-+-..++.-         .+.|++|        .||.++.  ++.+++....  ...|+...|.-|.
T Consensus       169 a~~~~~g~~~vVDnT~atP~~~~Pl~~GaDivvhS~TKy~~GhsdvlgG~vv~~~~~~~~~~~~~--~~~G~~~~p~~a~  246 (391)
T d1cl1a_         169 VRSVVPDAIIMIDNTWAAGVLFKALDFGIDVSIQAATKYLVGHSDAMIGTAVCNARCWEQLRENA--YLMGQMVDADTAY  246 (391)
T ss_dssp             HHHHCTTCEEEEECTTTTTTSSCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECTTTHHHHHHHH--HHTTCCCCHHHHH
T ss_pred             HHhccCCcEEEEeccccchhhhcccccccceEEeecchhccccccccccceeccccccccchhhh--hcccccCCchhhh
Confidence            9765  9999999998777765         2345543        2666654  3333332211  1123333444443


Q ss_pred             HHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CCE-EecCCCCC---------------eEEEEEecCCCcchHHHH
Q psy10669        206 IATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GYH-VVTGGTDV---------------HLILIDLRKNKLTGSKVE  268 (337)
Q Consensus       206 la~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~~-v~~~~t~~---------------h~v~V~~~~~~~~~~~~~  268 (337)
                      +.  ++-+  ..+..++++..+||..+++.|++. .+. |...+-.+               -++.+.+.... +..++.
T Consensus       247 ll--~rgl--~TL~lR~~~~~~nA~~vA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~-~~e~~~  321 (391)
T d1cl1a_         247 IT--SRGL--RTLGVRLRQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKL-NNEELA  321 (391)
T ss_dssp             HH--HHHH--TTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCC-CHHHHH
T ss_pred             hh--hccc--hhHHHHHHHHHHHHHHHHHHHHhcccccccccccccchhhHHHHhhccCCCCcceeeeecCCC-CHHHHH
Confidence            32  2233  356789999999999999999983 333 22222111               25556666543 556667


Q ss_pred             HHHhhcCce
Q psy10669        269 LVLEEIAIA  277 (337)
Q Consensus       269 ~~L~~~gI~  277 (337)
                      +.++...+.
T Consensus       322 ~f~d~L~l~  330 (391)
T d1cl1a_         322 NYLDNFSLF  330 (391)
T ss_dssp             HHHTTCSSC
T ss_pred             HHHHcCCcc
Confidence            777765443

>d2gb3a1 c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: AAT homologue TM1698
species: Thermotoga maritima [TaxId: 2336]

Probab=98.37  E-value=4.4e-05  Score=70.52  Aligned_cols=236  Identities=10%  Similarity=-0.009  Sum_probs=125.4

Q ss_pred             HHHhhcccc-eeeeccCCC--CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCccee
Q psy10669         24 KEKHRQING-IELIASENF--TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNV  100 (337)
Q Consensus        24 ~e~~rq~~~-i~l~asen~--~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v  100 (337)
                      ++.+++... |+|-..+.-  .|+.+++++....  ....+|+..   .|....  -|..+ +.+.+.+|.+.. + -+|
T Consensus        21 ~~~~~~g~~vi~l~~G~p~~~~p~~~~~al~~~~--~~~~~Y~~~---~G~~~L--R~aia-~~~~~~~g~~~~-~-~~I   90 (389)
T d2gb3a1          21 EMAKKRGVRIHHLNIGQPDLKTPEVFFERIYENK--PEVVYYSHS---AGIWEL--REAFA-SYYKRRQRVDVK-P-ENV   90 (389)
T ss_dssp             HHHHHTTCEEEECSSCCCCSCCCTHHHHHHHHTC--CSSCCCCCT---TCCHHH--HHHHH-HHHHHTSCCCCC-G-GGE
T ss_pred             HHHHHcCCCEEECCCCCCCCCCCHHHHHHHHhcC--CCCCCCCCC---cCCHHH--HHHHH-HHHHHhcCCCcc-c-ceE
Confidence            444455444 666655543  4788888886431  112223222   122222  12222 355666675432 1 258


Q ss_pred             ecCCC-chhHHHHHHhhCCc----------------------------------------ccc-----cccEEEEc-Ccc
Q psy10669        101 QPYSG-SPANFAVCEKALPT----------------------------------------NNA-----RFDFLSSG-TTC  133 (337)
Q Consensus       101 ~~~Sg-t~AN~~v~~aLl~~----------------------------------------~~a-----~pklII~~-~S~  133 (337)
                      ..++| +++...++.+++++                                        .+.     +++++++. +.+
T Consensus        91 ~it~G~~~~l~~~~~~l~~~gd~V~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nP~N  170 (389)
T d2gb3a1          91 LVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAIPQNLESFINERTKGIVLSNPCN  170 (389)
T ss_dssp             EEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCCCTTGGGGCCTTEEEEEEESSCT
T ss_pred             EecccccccccccccccccCCCeEEEeCCCCccccccccccCccccccccccccccchhhhhhhhcccCccEEEeCCCCc
Confidence            88888 56777788888764                                        011     14665554 433


Q ss_pred             -cccccChH---HHHHHhhhcCCeEEEeccccccccc---------------eeeeeccC-------Cchhhh--h-HHH
Q psy10669        134 -YSRCLDYA---RFRQICDETDSIMFADMSHISGLIA---------------GVKGVTKT-------GEKILY--D-YEE  184 (337)
Q Consensus       134 -~~~~~d~~---~l~eia~~~ga~l~vD~AH~~Gli~---------------g~~~T~~~-------Gg~i~~--~-l~~  184 (337)
                       .+...+.+   +|.++|++++++++.|+++.-=...               .+.|+.|+       -|++++  + +..
T Consensus       171 PtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~v~~s~sK~~~~~GlRiG~~~~~~~~i~~  250 (389)
T d2gb3a1         171 PTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESDKVVVIDSVSKKFSACGARVGCLITRNEELIS  250 (389)
T ss_dssp             TTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCCTTEEEEEESTTTTTCGGGCCEEEECSCHHHHH
T ss_pred             cccccchHHHHHHHHhhcccCCEEEEEeccccccccccccccccccccccccccccccccccCcccceeeeeccchhHHH
Confidence             23555544   5667889999999999998532111               12233332       244443  2 333


Q ss_pred             HHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcch
Q psy10669        185 KINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTG  264 (337)
Q Consensus       185 ~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~  264 (337)
                      ....... ... ++......+....+ ...+...++.++...++.+.+.+.|.+.|+.........-.+++++...  ++
T Consensus       251 ~~~~~~~-~~~-~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~~g~~~~~~lp~~--~~  325 (389)
T d2gb3a1         251 HAMKLAQ-GRL-APPLLEQIGSVGLL-NLDDSFFDFVRETYRERVETVLKKLEEHGLKRFTKPSGAFYITAELPVE--DA  325 (389)
T ss_dssp             HHHHHHH-HSC-CCCHHHHHHHHHHH-TCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCBCCCSBSSEEEEECSSS--CH
T ss_pred             HHhhhhh-ccc-cccccccccccccc-cccchhcccccccccccchhhhhhhhhhccccccCCCceEEEEEeCCCC--CH
Confidence            3322111 112 22333333322222 2112334667788889999999999998876544345566778887543  45


Q ss_pred             HHHHHHH-hhc
Q psy10669        265 SKVELVL-EEI  274 (337)
Q Consensus       265 ~~~~~~L-~~~  274 (337)
                      .+..+.| +++
T Consensus       326 ~~~~~~ll~e~  336 (389)
T d2gb3a1         326 EEFARWMLTDF  336 (389)
T ss_dssp             HHHHHHHHHSC
T ss_pred             HHHHHHHHHhh
Confidence            5555554 443

>d1o4sa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermotoga maritima [TaxId: 2336]

Probab=98.37  E-value=2.2e-05  Score=72.30  Aligned_cols=240  Identities=14%  Similarity=0.051  Sum_probs=134.6

Q ss_pred             cceeeeccCCC--CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-ch
Q psy10669         31 NGIELIASENF--TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SP  107 (337)
Q Consensus        31 ~~i~l~asen~--~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~  107 (337)
                      .-|+|-..+.-  .|+.+++++...+.+. ..+|+..+   |....   -+...+.+.+.+|.+.+.  .++.+++| ++
T Consensus        29 ~vI~l~~G~p~~~~p~~i~~~~~~~~~~~-~~~Y~~~~---G~~~l---R~aia~~~~~~~~~~~~~--~~i~~t~G~~~   99 (375)
T d1o4sa_          29 DVINLTAGEPDFPTPEPVVEEAVRFLQKG-EVKYTDPR---GIYEL---REGIAKRIGERYKKDISP--DQVVVTNGAKQ   99 (375)
T ss_dssp             CCEECCCSSCSSCCCHHHHHHHHHHHTTC-CCCCCCTT---CCHHH---HHHHHHHHHHHHTCCCCG--GGEEEESHHHH
T ss_pred             CeEECCCcCCCCCCCHHHHHHHHHHHhcC-CcCCCCCc---CCHHH---HHHHHhhhhhcccccccc--ccccccCcHHH
Confidence            34666655543  3788999987654432 12232221   33322   212223555566654422  25777677 67


Q ss_pred             hHHHHHHhhCCc-------------------------------------------ccc---cccEEEE-cCcc-cccccC
Q psy10669        108 ANFAVCEKALPT-------------------------------------------NNA---RFDFLSS-GTTC-YSRCLD  139 (337)
Q Consensus       108 AN~~v~~aLl~~-------------------------------------------~~a---~pklII~-~~S~-~~~~~d  139 (337)
                      |...++.+|+++                                           +..   +++++++ ++.+ -++..+
T Consensus       100 al~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nP~NPTG~~~s  179 (375)
T d1o4sa_         100 ALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYR  179 (375)
T ss_dssp             HHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCCTTEEEEEEESSCTTTCCCCC
T ss_pred             HHHHHHHHHhCCCCEEEEccCccccchhhhhccccccccccccccccccchhHHHHHhhccCccEEEEeCCCCCccCCCC
Confidence            888888999765                                           011   1455544 4544 235555


Q ss_pred             hHH---HHHHhhhcCCeEEEeccccccccc----------------eeeeec-c-------CCchhhh--hHHHHHhhcc
Q psy10669        140 YAR---FRQICDETDSIMFADMSHISGLIA----------------GVKGVT-K-------TGEKILY--DYEEKINNAV  190 (337)
Q Consensus       140 ~~~---l~eia~~~ga~l~vD~AH~~Gli~----------------g~~~T~-~-------~Gg~i~~--~l~~~i~~~~  190 (337)
                      .++   |.++|++++++|+.|+.|..-...                .+.++. |       +-|++++  ++.+.+....
T Consensus       180 ~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~G~R~G~~~~~~~~~~~~~~~~  259 (375)
T d1o4sa_         180 REFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISSEKVATAVSKIQ  259 (375)
T ss_dssp             HHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHH
T ss_pred             HHHHHHHHHhHHHcCCceehHhhhccccccccccccccccCCCCCEEEEeechhhccCCccccccccccccchhhhhhhh
Confidence            555   556789999999999988654433                112222 2       2355544  3433333221


Q ss_pred             CCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHH
Q psy10669        191 FPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELV  270 (337)
Q Consensus       191 ~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~  270 (337)
                      .+... ........   .+.... +......++...++.+.+.+.|++.|+++... ..+-.+++++...  +...+.++
T Consensus       260 ~~~~~-~~~~~~~~---~~~~~~-~~~~~~~~~~~~~r~~~~~~~l~~~g~~~~~p-~gg~f~~~~~~~~--~~~~~~~l  331 (375)
T d1o4sa_         260 SHTTS-CINTVAQY---AALKAL-EVDNSYMVQTFKERKNFVVERLKKMGVKFVEP-EGAFYLFFKVRGD--DVKFCERL  331 (375)
T ss_dssp             HHHTC-SCCHHHHH---HHHHHT-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCC-SBSSEEEEECSSC--HHHHHHHH
T ss_pred             ccccc-cccccchh---hhhhhc-ccchhhhHHHHHHHHHHHHHHHHhcCceEecC-CccEEEEEECCCC--HHHHHHHH
Confidence            11111 11212211   112222 33456778888889999999999999988652 2344577877642  45666677


Q ss_pred             HhhcCceeccCc------ccchh
Q psy10669        271 LEEIAIACNKNT------GISLA  287 (337)
Q Consensus       271 L~~~gI~v~~~~------girig  287 (337)
                      |+++||.+.+-.      .|||+
T Consensus       332 l~~~gV~v~pG~~F~~~g~iRis  354 (375)
T d1o4sa_         332 LEEKKVALVPGSAFLKPGFVRLS  354 (375)
T ss_dssp             HHHHCEECEEGGGGTCTTEEEEE
T ss_pred             HHhCCEEEEEccccCCCCeEEEE
Confidence            878899998633      37775

>d2byla1 c.67.1.4 (A:36-439) Ornithine aminotransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.33  E-value=3e-06  Score=80.12  Aligned_cols=146  Identities=18%  Similarity=0.168  Sum_probs=85.3

Q ss_pred             hHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeecc--CCchh-h-----h-hHHHHHhhccCCCCCCC
Q psy10669        140 YARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTK--TGEKI-L-----Y-DYEEKINNAVFPSLQGG  197 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~--~Gg~i-~-----~-~l~~~i~~~~~p~~~g~  197 (337)
                      ++.|+++|+++|++||+|+-|+ .|=.+        |    ++.-+|  .||++ +     . ++.+.+.+....+++ +
T Consensus       211 l~~l~~lc~~~g~llI~DEV~tGfgR~G~~~a~~~~gv~PDi~~~gK~l~gG~~p~~av~~~~~i~~~~~~~~~~~T~-~  289 (404)
T d2byla1         211 LMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYENVRPDIVLLGKALSGGLYPVSAVLCDDDIMLTIKPGEHFSTY-G  289 (404)
T ss_dssp             HHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTTSSCCEEEEECHHHHTTSCTTSSCCSS-T
T ss_pred             HHHHHHHHHhcCeEEEeeccccccccccccchhhhcCCCCCEEEECchhhCCCccceeeeechhhhhccCCCCCCcCC-C
Confidence            5679999999999999999984 22233        1    111122  24432 2     1 344444444333333 3


Q ss_pred             CcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEec--CCCCCeEEEEEecC-CCcchHHHHHHHhhc
Q psy10669        198 PHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVT--GGTDVHLILIDLRK-NKLTGSKVELVLEEI  274 (337)
Q Consensus       198 ~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~--~~t~~h~v~V~~~~-~~~~~~~~~~~L~~~  274 (337)
                      .|+...|+..+.+..+.+   +...+++.+..++|.+.|.+..-+.+.  .+. .-+.-+.+.. .+.....+...|.+.
T Consensus       290 gnpl~~aaa~a~L~~i~~---~~l~~~~~~~g~~l~~~l~~l~~~~i~~vRg~-Gl~~~i~~~~~~~~~~~~~~~~l~~~  365 (404)
T d2byla1         290 GNPLGCRVAIAALEVLEE---ENLAENADKLGIILRNELMKLPSDVVTAVRGK-GLLNAIVIKETKDWDAWKVCLRLRDN  365 (404)
T ss_dssp             TCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHTSCTTTEEEEEEE-TTEEEEEECCCSSCCHHHHHHHHHHT
T ss_pred             cCHHHHHHHHHHHHHHHh---cCchhhhhHhhHHHHHHHHhhccccceeeeec-ccEEEEEEecCCchhHHHHHHHHHhC
Confidence            467777777777777653   245777888888899988874222221  001 1133344533 334566677788888


Q ss_pred             CceeccCc--ccchhhhh
Q psy10669        275 AIACNKNT--GISLAAEI  290 (337)
Q Consensus       275 gI~v~~~~--girig~~~  290 (337)
                      |+.+.+..  .||+.-+.
T Consensus       366 Gvl~~~~~~~~i~l~PpL  383 (404)
T d2byla1         366 GLLAKPTHGDIIRFAPPL  383 (404)
T ss_dssp             TEECEEEETTEEEECCCT
T ss_pred             CeEEecCCCCEEEEECCc
Confidence            99987532  57776443

>d2f8ja1 c.67.1.1 (A:1-334) Histidinol-phosphate aminotransferase HisC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Thermotoga maritima [TaxId: 2336]

Probab=98.31  E-value=3.5e-05  Score=70.06  Aligned_cols=232  Identities=12%  Similarity=0.094  Sum_probs=136.6

Q ss_pred             ceeeeccCCCC--CHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCC--CCCCcceeecCCCc-
Q psy10669         32 GIELIASENFT--SLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLD--PEQWGCNVQPYSGS-  106 (337)
Q Consensus        32 ~i~l~asen~~--~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~--~~~~~~~v~~~Sgt-  106 (337)
                      -|.|-..||-.  |+.+.+++...+.......+|..    |.   .++    |+.++++++.+  .+   .+|..++|+ 
T Consensus        21 ~~~l~~~enp~~~p~~i~~~~~~~~~~~~~~~yp~~----g~---~~L----r~aia~~~~~~~v~~---d~I~it~G~~   86 (334)
T d2f8ja1          21 KTYLALNENPFPFPEDLVDEVFRRLNSDALRIYYDS----PD---EEL----IEKILSYLDTDFLSK---NNVSVGNGAD   86 (334)
T ss_dssp             SEECSSCCCSSCCCHHHHHHHHHHCCTTGGGSCCCS----SC---HHH----HHHHHHHHTCSSCCG---GGEEEEEHHH
T ss_pred             ceEEECCCCCCCCCHHHHHHHHHHhhcchhcCCCCC----Cc---HHH----HHHHHHHhcccCCCc---ceEEecCcch
Confidence            44454566744  78888888765443211112221    22   223    34566676643  22   248888885 


Q ss_pred             hhHHHHHHhhC-----Cc----------------------------ccc--cccEEEE-cCcc-cccccChHHHHHHhhh
Q psy10669        107 PANFAVCEKAL-----PT----------------------------NNA--RFDFLSS-GTTC-YSRCLDYARFRQICDE  149 (337)
Q Consensus       107 ~AN~~v~~aLl-----~~----------------------------~~a--~pklII~-~~S~-~~~~~d~~~l~eia~~  149 (337)
                      ++...++.++-     .|                            +..  +++++++ ++.+ .+...+-+.+.++++ 
T Consensus        87 ~~l~~l~~~~d~v~i~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~~~~~l~l~nP~NPtG~~~s~~~l~~~~~-  165 (334)
T d2f8ja1          87 EIIYVMMLMFDRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRIPEVNVGEGDVVFIPNPNNPTGHVFEREEIERILK-  165 (334)
T ss_dssp             HHHHHHHHHSSEEEECSSCCHHHHHHHHHHTCCEEECCCCTTSCCCCCCCCTTEEEEEESSCTTTCCCCCHHHHHHHHT-
T ss_pred             hHHHHHhhhccccccccccccccccchhccCCccccccccccccccccccccceEEEecccccccceeecHHHhhcccc-
Confidence            56666555541     11                            111  2566655 4544 457788888888764 


Q ss_pred             cCCeEEEeccccccccc------------eeeeec-c-------CCchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHH
Q psy10669        150 TDSIMFADMSHISGLIA------------GVKGVT-K-------TGEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIA  207 (337)
Q Consensus       150 ~ga~l~vD~AH~~Gli~------------g~~~T~-~-------~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala  207 (337)
                      ++.++++|+.+.-....            .++++. |       +.|+++.  ++.+.++......   +.+.+...+..
T Consensus       166 ~~~~ii~Dd~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~~~i~~l~~~~~~~---~~s~~~~~~a~  242 (334)
T d2f8ja1         166 TGAFVALDEAYYEFHGESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASEKFIDAYNRVRLPF---NVSYVSQMFAK  242 (334)
T ss_dssp             TTCEEEEECTTGGGTCCCCGGGGGTCSSEEEEEESTTTSSCTTTCEEEEEECHHHHHHHHHHSCTT---CSCHHHHHHHH
T ss_pred             ceeEEeecccchhhcccccccccccCceEEEEecCccccchhhhhhhhcccchHHHHHHHHhhccc---ccchhhhhhcc
Confidence            58999999987543222            122332 2       2244444  4666666543322   23344444433


Q ss_pred             HHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCc-ccch
Q psy10669        208 TAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNT-GISL  286 (337)
Q Consensus       208 ~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~-giri  286 (337)
                      +.+..  .....+.++++.++.+.|.+.|.+.|+++..  .+..-+++.+..  .+..++.+.|.+.||.+.... +|||
T Consensus       243 ~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~--~~g~f~~~~~~~--~~~~~~~~~L~~~GI~vr~~~~~vRi  316 (334)
T d2f8ja1         243 VALDH--REIFEERTKFIVEERERMKSALREMGYRITD--SRGNFVFVFMEK--EEKERLLEHLRTKNVAVRSFREGVRI  316 (334)
T ss_dssp             HHHHT--HHHHHHHHHHHHHHHHHHHHHHHHHTCEECC--CCSSEEEEECCH--HHHHHHHHHHHHTTEECEEETTEEEE
T ss_pred             ccccc--ccchhhHHHHHHHHHHHHHHHHHHCCCeECC--CCceEEEEECCC--CCHHHHHHHHHHCCCEECCCCCeEEE
Confidence            33333  2345677888999999999999999999875  344456676654  367888889988999986533 8898


Q ss_pred             h
Q psy10669        287 A  287 (337)
Q Consensus       287 g  287 (337)
                      +
T Consensus       317 s  317 (334)
T d2f8ja1         317 T  317 (334)
T ss_dssp             E
T ss_pred             E
Confidence            5

>d1pffa_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL2 [TaxId: 5722]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Trichomonas vaginalis, MGL2 [TaxId: 5722]

Probab=98.27  E-value=8.2e-06  Score=75.16  Aligned_cols=182  Identities=14%  Similarity=0.085  Sum_probs=115.4

Q ss_pred             HHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc----------------------------------------ccc
Q psy10669         83 QRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT----------------------------------------NNA  122 (337)
Q Consensus        83 ~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~----------------------------------------~~a  122 (337)
                      ++++++-|.+.     ++.|.||..|..+++.+++++                                        +.+
T Consensus         5 ~~la~Leg~~~-----a~~~sSGMaAi~~~l~~ll~~Gd~iv~~~~~Yg~t~~~~~~~l~~~gi~~~~~d~~d~~~~~~~   79 (331)
T d1pffa_           5 GKIAKLEHAEA-----CAATASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDMAVPGNIEKH   79 (331)
T ss_dssp             HHHHHHHTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTSTTHHHHT
T ss_pred             HHHHHHhCCCe-----EEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHhcCeEEEEecccchhhHhhh
Confidence            58899999985     799999999987778898875                                        111


Q ss_pred             ---cccEEEEc-Cccc-ccccChHHHHHH-hhhcCCeEEEeccccccccc---------eeeeecc--------CCchhh
Q psy10669        123 ---RFDFLSSG-TTCY-SRCLDYARFRQI-CDETDSIMFADMSHISGLIA---------GVKGVTK--------TGEKIL  179 (337)
Q Consensus       123 ---~pklII~~-~S~~-~~~~d~~~l~ei-a~~~ga~l~vD~AH~~Gli~---------g~~~T~~--------~Gg~i~  179 (337)
                         ++++|++. .++- ....|++++.++ ++++|++++||-+-...+.-         .+.|++|        .||.++
T Consensus        80 i~~~t~~i~~Es~~np~~~v~d~~~~~~~~a~~~~~~~vVDnT~atp~~~~pl~~GaDiVv~S~TKy~~Gh~d~~~G~v~  159 (331)
T d1pffa_          80 LKPNTRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPILTNPLDLGVDIVVHSATKYINGHTDVVAGLVC  159 (331)
T ss_dssp             CCTTEEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTSSSSSCCCEEEE
T ss_pred             cccccceeeeecccccccccccchhhhhhhhcccCceEEeeccccccccccccccCCCEEEecchhhcCCCCcccccccc
Confidence               26788776 4443 378889988887 56789999999997765544         2445544        256555


Q ss_pred             h--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-CC-EEecCC--------
Q psy10669        180 Y--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-GY-HVVTGG--------  247 (337)
Q Consensus       180 ~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-G~-~v~~~~--------  247 (337)
                      .  +.........+....|+...|.-|.+..  .-+  ..+..+.++..+||..+++.|++. .+ +|..++        
T Consensus       160 ~~~~~~~~~~~~~~~~~~G~~l~p~~a~ll~--rgl--~Tl~~Rm~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~  235 (331)
T d1pffa_         160 SRADIIAKVKSQGIKDITGAIISPHDAWLIT--RGT--LTLDMRVKRAAENAQKVAEFLHEHKAVKKVYYPGLPDHPGHE  235 (331)
T ss_dssp             ECHHHHHHHHHTCCCCCCCCCCCHHHHHHHH--HHH--HHHHHHHHHHHHHHHHHHHHHHHCTTCCCEECTTSTTSTTHH
T ss_pred             ccccchhhhhhhhhhhccCCCCCHHHHHHHH--HHH--HHHHHHHHHHHHHHHHHHHhhhhCCcEEeeccccccCccHHH
Confidence            4  3333333222334445544444443332  222  356788999999999999999983 33 343321        


Q ss_pred             -------CCCeEEEEEecCCCcchHHHHHHHhhcCce
Q psy10669        248 -------TDVHLILIDLRKNKLTGSKVELVLEEIAIA  277 (337)
Q Consensus       248 -------t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~  277 (337)
                             .-..++.+.+.    +...+.+.++...+.
T Consensus       236 ~~~~~~~~~g~l~sf~l~----~~~~~~~f~d~l~lf  268 (331)
T d1pffa_         236 IAKKQMKMFGSMIAFDVD----GLEKAKKVLDNCHVV  268 (331)
T ss_dssp             HHHHHCSSCCSEEEEECS----SHHHHHHHHHTCSSS
T ss_pred             HHhhcccccCcccceeec----cHHHHHHHHHhCCcc
Confidence                   12335555543    245666777765543

>d1vp4a_ c.67.1.1 (A:) Putative aminotransferase TM1131 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative aminotransferase TM1131
species: Thermotoga maritima [TaxId: 2336]

Probab=98.26  E-value=1.1e-05  Score=75.82  Aligned_cols=138  Identities=9%  Similarity=-0.009  Sum_probs=77.9

Q ss_pred             hHHHHHHhhhcCCeEEEeccccccccc----------------eeeeecc-------CCchhhh--hHHHHHhhccCCCC
Q psy10669        140 YARFRQICDETDSIMFADMSHISGLIA----------------GVKGVTK-------TGEKILY--DYEEKINNAVFPSL  194 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~~Gli~----------------g~~~T~~-------~Gg~i~~--~l~~~i~~~~~p~~  194 (337)
                      .++|.++|++++.++++|+++.-=...                .+.++.+       +.|+++.  ++.+.+.....+..
T Consensus       205 ~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~i~~~s~sk~~~~G~RiG~~~~~~~~i~~l~~~~~~~~  284 (420)
T d1vp4a_         205 RKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSKVLAPGLRIGMVAGSKEFIRKIVQAKQSAD  284 (420)
T ss_dssp             HHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTEEEEEESTTTTCGGGCEEEEECCHHHHHHHHHHHHHHH
T ss_pred             hhhhhhhhhcccccccccchhhhccccCcccccccccccccceeEEeccccccccccccccccccchhhhhhhhhhhhcc
Confidence            345668899999999999997532221                1223332       2366554  46555544322222


Q ss_pred             CCCCcHHHHHHHHHHHHHH-hchhhHHHHHHHHHHHHHHHHHHHh-----CCCEEecCCCCCeEEEEEecCCCcchHHHH
Q psy10669        195 QGGPHNHAIGAIATAMLQA-QSDEFKSYQAQVKANASHLSDEMIK-----RGYHVVTGGTDVHLILIDLRKNKLTGSKVE  268 (337)
Q Consensus       195 ~g~~~~~~iaala~a~~e~-~~~~~~~y~~~v~~na~~l~~~L~~-----~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~  268 (337)
                      .+++.. ..++.+..+..- .....++.++...++.+.+.+.|.+     .|+++... ..+-.+++++.. +.+..++.
T Consensus       285 ~~~~~~-~q~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~g~~~~~p-~gg~f~~~~~~~-~~d~~~~~  361 (420)
T d1vp4a_         285 LCSPAI-THRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALEEYFSDIPGVKWVKS-EGGLFIWLTLPE-GFDTWEMF  361 (420)
T ss_dssp             SSCCHH-HHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHHHHSTTSTTCEECCC-SBSSEEEEECCT-TCCTTTTH
T ss_pred             ccCchh-hhhhhhhhcccccccccchhHHHHhhhhcccchhhhhhhhccCCCcEEecC-CceEEEEEECCC-CCCHHHHH
Confidence            323333 323333332221 1122344555666666666677766     37877642 334467788764 55777788


Q ss_pred             HHHhhcCceecc
Q psy10669        269 LVLEEIAIACNK  280 (337)
Q Consensus       269 ~~L~~~gI~v~~  280 (337)
                      +.|.+.||.+.+
T Consensus       362 ~~l~~~gV~v~P  373 (420)
T d1vp4a_         362 EYAKRKKVFYVP  373 (420)
T ss_dssp             HHHHHHTEECEE
T ss_pred             HHHHHCCeEEEe
Confidence            889999999864

>d1fg7a_ c.67.1.1 (A:) Histidinol-phosphate aminotransferase HisC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Escherichia coli [TaxId: 562]

Probab=98.23  E-value=5.4e-05  Score=69.17  Aligned_cols=226  Identities=14%  Similarity=0.087  Sum_probs=131.2

Q ss_pred             cceeeeccCCCCCH--HHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCC-ch
Q psy10669         31 NGIELIASENFTSL--AVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSG-SP  107 (337)
Q Consensus        31 ~~i~l~asen~~~p--~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sg-t~  107 (337)
                      ..|.|-+.||...+  .+.+    ...++|.+    ...       .+|    ++.+++++|.++    -+|..++| ++
T Consensus        28 ~~i~L~~ne~p~~~~~~~~~----~~l~rYPd----~~~-------~~L----r~~ia~~~gv~p----e~I~it~Gs~e   84 (354)
T d1fg7a_          28 GDVWLNANEYPTAVEFQLTQ----QTLNRYPE----CQP-------KAV----IENYAQYAGVKP----EQVLVSRGADE   84 (354)
T ss_dssp             CSEECSSCCCSSCCCCCCCC----CCTTSCCC----SSC-------HHH----HHHHHHHHTSCG----GGEEEESHHHH
T ss_pred             CCEEeeCCCCCCCCCHHHHH----HHHhcCCC----CcH-------HHH----HHHHHHHhCCCh----HHeeeccCchH
Confidence            45778888888733  2222    22356532    211       123    467889999987    37888888 57


Q ss_pred             hHHHHHHhhCCc----------------------------------------cc--c--cccEEEEcCccc--ccccChH
Q psy10669        108 ANFAVCEKALPT----------------------------------------NN--A--RFDFLSSGTTCY--SRCLDYA  141 (337)
Q Consensus       108 AN~~v~~aLl~~----------------------------------------~~--a--~pklII~~~S~~--~~~~d~~  141 (337)
                      +...++.+++++                                        ++  +  ++|+|++..-+.  +...+-+
T Consensus        85 ai~~~~~~~~~pgd~~Vl~~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~d~~~l~~~~~~~~~v~~~~pnNPtG~~~~~~  164 (354)
T d1fg7a_          85 GIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTLDNWQLDLQGISDKLDGVKVVYVCSPNNPTGQLINPQ  164 (354)
T ss_dssp             HHHHHHHHHCCTTTCEEEECSSSCTHHHHHHHHHTCEEEECCCCTTSCCCHHHHHTSCTTEEEEEEESSCTTTCCCCCHH
T ss_pred             HHHHHHHHhhccccccccccccccccchhhhhccCceeeccccccccccchhhhhhcccccceeeccCCCccceeEeeec
Confidence            888888998754                                        00  1  267777763343  3555555


Q ss_pred             HHHHHh--hhcCCeEEEeccccccccc--------------eeeeec-c-------CCchhhh--hHHHHHhhccCCCCC
Q psy10669        142 RFRQIC--DETDSIMFADMSHISGLIA--------------GVKGVT-K-------TGEKILY--DYEEKINNAVFPSLQ  195 (337)
Q Consensus       142 ~l~eia--~~~ga~l~vD~AH~~Gli~--------------g~~~T~-~-------~Gg~i~~--~l~~~i~~~~~p~~~  195 (337)
                      .+..++  .+.+.++++|++..- +..              .+..|. |       +-|+++.  ++.+.+.+...|...
T Consensus       165 ~~~~~~~~~~~~~~~iidd~~~~-f~~~~~~~~~~~~~~~~iv~~S~SK~~~laGlRiGy~i~~~~~i~~l~~~~~~~~~  243 (354)
T d1fg7a_         165 DFRTLLELTRGKAIVVADEAYIE-FCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANEEVINLLMKVIAPYPL  243 (354)
T ss_dssp             HHHHHHHHHTTTCEEEEECTTGG-GSGGGCSGGGTTTCTTEEEEEESSSTTCCGGGCCEEEEECHHHHHHHHHHSCSSCS
T ss_pred             ccccccccccccccccccccchh-hccccccchhhcccccceEEeCCccccCCCccccccccccchhhhhhhhhcCccch
Confidence            554333  235788888888642 111              123333 2       2356555  577777765444322


Q ss_pred             CCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcC
Q psy10669        196 GGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIA  275 (337)
Q Consensus       196 g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~g  275 (337)
                         +.+.....+.++..-.........+++.+.-+.+.+.|.+.|......++.+.-+++.+.    ++.++.+.|.+.|
T Consensus       244 ---~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~~~~~~~~~~p~~~~f~~~~~~----~~~~~~~~L~~~g  316 (354)
T d1fg7a_         244 ---STPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQVFDSETNYILARFK----ASSAVFKSLWDQG  316 (354)
T ss_dssp             ---CHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCCSSSEEEEEET----THHHHHHHHHHTT
T ss_pred             ---hhHHHHHHHHHHhhhccccccccchhhhhHHHHHHHHHHhCCCcceeCCCCceEEEEeCC----CHHHHHHHHHHCC
Confidence               223332222222111112334566777888888999999976532112255666788875    4667888888889


Q ss_pred             ceeccCc-------ccchh
Q psy10669        276 IACNKNT-------GISLA  287 (337)
Q Consensus       276 I~v~~~~-------girig  287 (337)
                      |.++...       .|||+
T Consensus       317 Ilvr~~~~~~~~~~~lRis  335 (354)
T d1fg7a_         317 IILRDQNKQPSLSGCLRIT  335 (354)
T ss_dssp             EECEECTTSTTCTTEEEEE
T ss_pred             cEEecCCCCCCCCCEEEEE
Confidence            9997533       57774

>d2ctza1 c.67.1.3 (A:1-421) O-acetyl-L-homoserine sulfhydrylase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: O-acetyl-L-homoserine sulfhydrylase
species: Thermus thermophilus [TaxId: 274]

Probab=98.21  E-value=9.6e-06  Score=76.98  Aligned_cols=189  Identities=15%  Similarity=0.103  Sum_probs=118.4

Q ss_pred             eeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHH
Q psy10669         34 ELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVC  113 (337)
Q Consensus        34 ~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~  113 (337)
                      .+..|-.|.-+...+ +...+..+ ..|+.-+|.  |+...+.+|    ++++++=|++.     ++.|.||..|..+++
T Consensus        24 PI~~sstf~~~~~~~-~~~~~~~~-~~~~~YsR~--~nPT~~~LE----~~la~LE~~~~-----a~~~~SGmaAi~~~~   90 (421)
T d2ctza1          24 PIYPTTSYVFKSPEH-AANLFALK-EFGNIYSRI--MNPTVDVLE----KRLAALEGGKA-----ALATASGHAAQFLAL   90 (421)
T ss_dssp             CBCCCSCBCCSCHHH-HHHHHTTT-TGGGSCBTT--BCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHH
T ss_pred             CccCCCCeecCCHHH-HHHhhcCC-cCCceecCC--CCHHHHHHH----HHHHHHhCCCe-----EEEecChHHHHHHHH
Confidence            366677776333222 21111222 223433443  778888999    58889999885     799999999988888


Q ss_pred             HhhCCc-----------------------------------------ccc---cccEEEEc-Cccc-ccccChHHHHHHh
Q psy10669        114 EKALPT-----------------------------------------NNA---RFDFLSSG-TTCY-SRCLDYARFRQIC  147 (337)
Q Consensus       114 ~aLl~~-----------------------------------------~~a---~pklII~~-~S~~-~~~~d~~~l~eia  147 (337)
                      .+++++                                         +..   ++|+|.+. +++- ....|++.|.++|
T Consensus        91 ~~l~~~gd~il~~~~~Yg~t~~l~~~~~~~~gi~~~~~d~~~~~~~~~~~~~~~t~li~~EtpsNP~l~v~Di~~i~~iA  170 (421)
T d2ctza1          91 TTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSREERPEEFLALTDEKTRAWWVESIGNPALNIPDLEALAQAA  170 (421)
T ss_dssp             HHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCTTCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHH
T ss_pred             HhhcccccceeecCCcCCchhHHHHHHHhhccccceecccccCcchhccccCCCceEEEEcCCCcceeEecchHHHHHHH
Confidence            999875                                         111   26898887 4443 4889999999999


Q ss_pred             hhcCCeEEEecccc-ccccc-----e----eeeecc--------CCchhhh--h----------------------HHHH
Q psy10669        148 DETDSIMFADMSHI-SGLIA-----G----VKGVTK--------TGEKILY--D----------------------YEEK  185 (337)
Q Consensus       148 ~~~ga~l~vD~AH~-~Gli~-----g----~~~T~~--------~Gg~i~~--~----------------------l~~~  185 (337)
                      +++|++++||.+-. ..+.-     |    +.|++|        .||.++.  +                      +.+.
T Consensus       171 ~~~g~~~vvDnT~a~tP~~~~Pl~~GaDiVvhS~TKyl~GHsD~l~G~vv~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~  250 (421)
T d2ctza1         171 REKGVALIVDNTFGMGGYLLRPLAWGAALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEA  250 (421)
T ss_dssp             HHHTCEEEEECGGGGGGTSCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHH
T ss_pred             HhcCCceEecccccccceeccccccCCcEEEEechhhccCCCCeEEEEEEcCCcchhhhcccccccCCchhhhhhHHHHH
Confidence            99999999999986 45543     2    344443        2555542  0                      0010


Q ss_pred             ------HhhccCC--CCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC
Q psy10669        186 ------INNAVFP--SLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR  239 (337)
Q Consensus       186 ------i~~~~~p--~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~  239 (337)
                            +.+...-  ...|+...|--|.+.  +.-+  .....++++..+||..+++.|++.
T Consensus       251 ~~~~~~~~~~~~~~~~~~G~~~sP~~a~l~--~rgl--~TL~lRm~~~~~nA~~vA~~L~~h  308 (421)
T d2ctza1         251 FGELAFIVKARVDGLRDQGQALGPFEAWVV--LLGM--ETLSLRAERHVENTLHLAHWLLEQ  308 (421)
T ss_dssp             HGGGHHHHHHHHTHHHHHCCCCCHHHHHHH--HHHH--TTHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             hccHHHHHHHHHHHHHhccCCCCHHHHHHH--hcCC--cchhhHHHHHHHHHHHHHhhhccC
Confidence                  1110000  002333434444432  3333  356789999999999999999984

>d1m7ya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Apple (Malus domestica) [TaxId: 3750]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Apple (Malus domestica) [TaxId: 3750]

Probab=98.19  E-value=7.1e-05  Score=70.44  Aligned_cols=152  Identities=9%  Similarity=0.036  Sum_probs=82.7

Q ss_pred             cEEEE-cCccc-ccccChH---HHHHHhhhcCCeEEEeccccccccc--------------------------eeeeec-
Q psy10669        125 DFLSS-GTTCY-SRCLDYA---RFRQICDETDSIMFADMSHISGLIA--------------------------GVKGVT-  172 (337)
Q Consensus       125 klII~-~~S~~-~~~~d~~---~l~eia~~~ga~l~vD~AH~~Gli~--------------------------g~~~T~-  172 (337)
                      ++|++ ++.+- +...+-+   +|.++|+++|+++++|+++..-...                          .+..+. 
T Consensus       191 ~~i~~~nP~NPtG~~~s~~~l~~i~~~a~~~~~~vI~De~Y~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~vi~~~s~S  270 (431)
T d1m7ya_         191 KGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLS  270 (431)
T ss_dssp             EEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHTTTTTCSSSSSGGGGEEEEEESS
T ss_pred             eEEEecCccccccccccccccccccccccccCcceeecccccccccCCCCCCCHHHHhhhcccccccccCceEEEEecCc
Confidence            44444 44442 4555544   4557788999999999998642211                          112222 


Q ss_pred             c-------CCchhhh--hH-HHHHhhccCCCCCCCCcHHHHHHHHHHHHH--HhchhhHHHHHHHHHHHHHHHHHHHhCC
Q psy10669        173 K-------TGEKILY--DY-EEKINNAVFPSLQGGPHNHAIGAIATAMLQ--AQSDEFKSYQAQVKANASHLSDEMIKRG  240 (337)
Q Consensus       173 ~-------~Gg~i~~--~l-~~~i~~~~~p~~~g~~~~~~iaala~a~~e--~~~~~~~~y~~~v~~na~~l~~~L~~~G  240 (337)
                      |       +.|+++.  ++ ...........   ....+...++++.+..  .......+.++++.++.+.+.+.|.+.|
T Consensus       271 K~~~~~G~RiG~~~~~~~~i~~~~~~~~~~~---~~~~~~~~~~~a~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g  347 (431)
T d1m7ya_         271 KDLGLPGFRVGAIYSNDDMVVAAATKMSSFG---LVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSG  347 (431)
T ss_dssp             SSSCCGGGCEEEEEESCHHHHHHHHHHGGGS---CCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             ccccCCCCccceeccchhhhHHHHHHHhccc---cccccccchhhhhhccchhhhhhhhhhhhhhhhhhhhhhhhhhcCC
Confidence            2       3455554  33 33333221221   2222333233222211  1122335566777888888999999999


Q ss_pred             CEEecCCCCCeEEEEEecCCCc-----ch-HHHHHHHhhcCceecc
Q psy10669        241 YHVVTGGTDVHLILIDLRKNKL-----TG-SKVELVLEEIAIACNK  280 (337)
Q Consensus       241 ~~v~~~~t~~h~v~V~~~~~~~-----~~-~~~~~~L~~~gI~v~~  280 (337)
                      +++..+ ..+-.++++++..-.     +. ..+.+.|+++||.+.+
T Consensus       348 i~~~~p-~gg~f~w~~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~P  392 (431)
T d1m7ya_         348 ISCLNG-NAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISP  392 (431)
T ss_dssp             CEECCC-CSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEE
T ss_pred             cEEecC-CceeEEEEECccccccCcccCHHHHHHHHHHHCCEEEEe
Confidence            998753 335567888864210     11 2244556778999876

>d2gsaa_ c.67.1.4 (A:) Glutamate-1-semialdehyde aminomutase (aminotransferase) {Synechococcus sp., strain GR6 [TaxId: 1131]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Glutamate-1-semialdehyde aminomutase (aminotransferase)
species: Synechococcus sp., strain GR6 [TaxId: 1131]

Probab=98.19  E-value=9.6e-06  Score=76.99  Aligned_cols=109  Identities=13%  Similarity=0.085  Sum_probs=66.3

Q ss_pred             cEEEEcCcccc---cccC----hHHHHHHhhhcCCeEEEeccccccccce-------------eeeecc--CCchhh---
Q psy10669        125 DFLSSGTTCYS---RCLD----YARFRQICDETDSIMFADMSHISGLIAG-------------VKGVTK--TGEKIL---  179 (337)
Q Consensus       125 klII~~~S~~~---~~~d----~~~l~eia~~~ga~l~vD~AH~~Gli~g-------------~~~T~~--~Gg~i~---  179 (337)
                      ..||+.+ ..+   +..+    ++.|+++|+++|++||+|+.|+ |+--|             +...+|  .||+.+   
T Consensus       201 aavi~Ep-i~g~~G~~~~~~~~l~~l~~lc~~~~~llI~DEv~t-G~r~g~~~~~~~~gi~PDi~~~gK~lggG~p~~a~  278 (427)
T d2gsaa_         201 AGVILEP-IVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVMT-GFRIAYGGVQEKFGVTPDLTTLGKIIGGGLPVGAY  278 (427)
T ss_dssp             EEEEECS-SBCSSSCBCCCTTHHHHHHHHHHHTTCEEEEECTTT-BTTTBTTCHHHHTTCCCSEEEECGGGGTTSCCEEE
T ss_pred             EEEEEcC-CcCCCCCccCCHHHHHHHHHHHHHhceeeeeccccc-cceecccchHHhcCCCHHHHhhhhccCCCcceeee
Confidence            4677764 433   3333    7789999999999999999995 54221             111122  234332   


Q ss_pred             --h-hHHHHHhhc--cCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh
Q psy10669        180 --Y-DYEEKINNA--VFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK  238 (337)
Q Consensus       180 --~-~l~~~i~~~--~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~  238 (337)
                        . ++.+.+.+.  .+.+.+-+.|+-..|+..+++..+.+   +...+++.++.++|.+.|++
T Consensus       279 ~~~~~i~~~~~~~~~~~~~~T~~gnpla~AAala~Le~i~~---~~l~~~~~~~g~~l~~~L~~  339 (427)
T d2gsaa_         279 GGKREIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQ---PGTYEYLDQITKRLSDGLLA  339 (427)
T ss_dssp             EECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHH
T ss_pred             eehHHHHHHhcccCCCcCCCCCCCCchhhHHHHHhhHHhhh---hhHHhhhhHHHHHHHHHHHH
Confidence              2 455544431  22222335677777777777766654   24578888888888888865

>d1e5ea_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL1 [TaxId: 5722]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Trichomonas vaginalis, MGL1 [TaxId: 5722]

Probab=98.15  E-value=2.9e-05  Score=72.98  Aligned_cols=190  Identities=15%  Similarity=0.114  Sum_probs=122.8

Q ss_pred             eeeeccCCCCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHH
Q psy10669         33 IELIASENFTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAV  112 (337)
Q Consensus        33 i~l~asen~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v  112 (337)
                      -.+..|-.|.-+...+... .+..+. .|+.-+|.  |+...+.+|    ++++++=|.+.     ++.|.||..|..++
T Consensus        24 ~PI~~sst~~~~~~~~~~~-~~~~~~-~~~~YsR~--~nPT~~~le----~~la~LEg~~~-----a~~~sSGmaAi~~~   90 (394)
T d1e5ea_          24 PPIYQTSTFVFDNCQQGGN-RFAGQE-SGYIYTRL--GNPTVSNLE----GKIAFLEKTEA-----CVATSSGMGAIAAT   90 (394)
T ss_dssp             CCCCCCSBCCCSSHHHHHH-HHTTSS-CSCCBTTT--CCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHH
T ss_pred             CCccCCCCeeeCCHHHHHH-hhcCCc-CCceecCC--CCHHHHHHH----HHHHHHhCCcc-----eeeeccchHHHHHH
Confidence            3466677777555443332 223221 24444453  778888999    58889999985     79999999999888


Q ss_pred             HHhhCCc----------------------------------------ccc-c--ccEEEEc-Ccccc-cccChHHHHHHh
Q psy10669        113 CEKALPT----------------------------------------NNA-R--FDFLSSG-TTCYS-RCLDYARFRQIC  147 (337)
Q Consensus       113 ~~aLl~~----------------------------------------~~a-~--pklII~~-~S~~~-~~~d~~~l~eia  147 (337)
                      +.+++++                                        +.+ +  +|+|.+. .++-. ...|++++.+++
T Consensus        91 ~l~l~~~gd~vv~~~~~yg~t~~~~~~~~~~~gi~~~~~d~~d~~~~~~~i~~~t~lv~~Etp~NP~l~v~Di~~~~~~~  170 (394)
T d1e5ea_          91 VLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFINTAIPGEVKKHMKPNTKIVYFETPANPTLKIIDMERVCKDA  170 (394)
T ss_dssp             HHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTSTTHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHH
T ss_pred             HHhhcccccccccccceeehhhHhHHHHhhccceeeeccCCCCHHHHHHhhcccccEEEEeccCCcceeeehhhhhhhcc
Confidence            8999875                                        111 1  6888887 44433 566999887755


Q ss_pred             -hhcCCeEEEeccccccccc-----e----eeeecc--------CCchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHH
Q psy10669        148 -DETDSIMFADMSHISGLIA-----G----VKGVTK--------TGEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIA  207 (337)
Q Consensus       148 -~~~ga~l~vD~AH~~Gli~-----g----~~~T~~--------~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala  207 (337)
                       ++.|++++||-+-...+.-     |    +.|++|        .||.++.  +....+....+....|+...|.-|.+.
T Consensus       171 ~~~~g~~vvvDnT~atP~~~~Pl~~GaDiVvhS~TKy~~GhsDv~~G~v~~~~~~~~~~~~~~~~~~~G~~lsp~~a~ll  250 (394)
T d1e5ea_         171 HSQEGVLVIADNTFCSPMITNPVDFGVDVVVHSATKYINGHTDVVAGLICGKADLLQQIRMVGIKDITGSVISPHDAWLI  250 (394)
T ss_dssp             HTSTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTCCCCCCCCCCCHHHHHHH
T ss_pred             ccccCeEEEecCcccCcccCCchhcCCCEEEechhhhcCCCcccccccccchhhHHHHHHHHHHHHhhCCCCChHHHHHH
Confidence             5578999999998777665     2    345543        2665554  344433322222334454444444432


Q ss_pred             HHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC
Q psy10669        208 TAMLQAQSDEFKSYQAQVKANASHLSDEMIKR  239 (337)
Q Consensus       208 ~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~  239 (337)
                      .  .-+  +.+..++++..+||..+++.|++.
T Consensus       251 ~--rgl--~TL~lRm~r~~~nA~~lA~~L~~h  278 (394)
T d1e5ea_         251 T--RGL--STLNIRMKAESENAMKVAEYLKSH  278 (394)
T ss_dssp             H--HHH--TTHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             H--hhc--hhHHHHHHHHHHHHHHHHHHHhhc
Confidence            2  233  356789999999999999999995

>d1n8pa_ c.67.1.3 (A:) Cystathionine gamma-lyase (CYS3) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-lyase (CYS3)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.13  E-value=1.1e-05  Score=76.03  Aligned_cols=154  Identities=14%  Similarity=0.101  Sum_probs=103.5

Q ss_pred             ccchHHHHHHHHHHHHHhhcCCCCCCCcceeecCCCchhHHHHHHhhCCc------------------------------
Q psy10669         70 GNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVCEKALPT------------------------------  119 (337)
Q Consensus        70 G~~~~~~lE~~~~~~~a~lfg~~~~~~~~~v~~~Sgt~AN~~v~~aLl~~------------------------------  119 (337)
                      |+...+.+|    ++++++-|.++     ++.|.||..|..+++. ++++                              
T Consensus        53 gnPT~~~lE----~~la~LE~~~~-----a~~~sSGmaAi~~~l~-~l~~gd~iv~~~~~yg~t~~~~~~~l~~~gi~~~  122 (393)
T d1n8pa_          53 QNPNRENLE----RAVAALENAQY-----GLAFSSGSATTATILQ-SLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETS  122 (393)
T ss_dssp             CCHHHHHHH----HHHHHHTTCSE-----EEEESCHHHHHHHHHH-TSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCE
T ss_pred             CChHHHHHH----HHHHHHhCCce-----EEEecCchhHHHhhhh-cccCCCeeeeeeeecccchhhhhhhhhcccceeE
Confidence            778888999    58899999885     7999999888776654 4432                              


Q ss_pred             ---------ccc---cccEEEEc-Ccc-cccccChHHHHHHhh----hcCCeEEEeccccccccc---------eeeeec
Q psy10669        120 ---------NNA---RFDFLSSG-TTC-YSRCLDYARFRQICD----ETDSIMFADMSHISGLIA---------GVKGVT  172 (337)
Q Consensus       120 ---------~~a---~pklII~~-~S~-~~~~~d~~~l~eia~----~~ga~l~vD~AH~~Gli~---------g~~~T~  172 (337)
                               +.+   ++|+|.+. +++ .....|++.+.++|+    ++|++++||-+-...+.-         .+.|++
T Consensus       123 ~~~~~~~~~~~~i~~~t~lv~~EspsNP~l~v~Di~~ia~~a~~~~~~~g~~lvVDnT~atP~~~~Pl~~GADiVvhS~T  202 (393)
T d1n8pa_         123 FTNDLLNDLPQLIKENTKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLSPYISNPLNFGADIVVHSAT  202 (393)
T ss_dssp             EESSHHHHHHHHSCSSEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEECTTTHHHHCCGGGGTCSEEEEETT
T ss_pred             EeecchHHHHHHhhhhcceeEecCcchhhhhccchhhhhhhhhhhcccCCceEEEecCccCcccCCchhhCCCEEEEccc
Confidence                     111   26899887 444 348899999999998    678999999997665543         234544


Q ss_pred             c--------CCchhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC
Q psy10669        173 K--------TGEKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR  239 (337)
Q Consensus       173 ~--------~Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~  239 (337)
                      |        .||.++.   ++.+++.... -. .|+...|.-|.+  .+.-+  ..+..+.++..+||..+++.|...
T Consensus       203 Kyi~GhsDv~~G~v~~~~~~~~~~l~~~~-~~-~G~~~~p~~a~l--l~rgl--~Tl~lR~~~~~~nA~~lA~~L~~~  274 (393)
T d1n8pa_         203 KYINGHSDVVLGVLATNNKPLYERLQFLQ-NA-IGAIPSPFDAWL--THRGL--KTLHLRVRQAALSANKIAEFLAAD  274 (393)
T ss_dssp             TTTTCSSCCCCEEEEESCHHHHHHHHHHH-HH-HCCCCCHHHHHH--HHHHH--TTHHHHHHHHHHHHHHHHHHHTSC
T ss_pred             cccCCCCccccceeeecchhHHHHHHHHH-hh-cCCCCChHHHHH--HHhCC--cchhhHHHHHHHHHHHHHHHHHhc
Confidence            3        3666653   3555554321 11 233333332322  22333  357889999999999999999753

>d1iaya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Tomato (Lycopersicon esculentum) [TaxId: 4081]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Tomato (Lycopersicon esculentum) [TaxId: 4081]

Probab=98.13  E-value=1.4e-05  Score=75.48  Aligned_cols=152  Identities=9%  Similarity=0.057  Sum_probs=85.4

Q ss_pred             cEEE-EcCcc-cccccCh---HHHHHHhhhcCCeEEEeccccccccc------------------------eeeeec-c-
Q psy10669        125 DFLS-SGTTC-YSRCLDY---ARFRQICDETDSIMFADMSHISGLIA------------------------GVKGVT-K-  173 (337)
Q Consensus       125 klII-~~~S~-~~~~~d~---~~l~eia~~~ga~l~vD~AH~~Gli~------------------------g~~~T~-~-  173 (337)
                      ++|+ +.+++ .+...+.   ++|.++|+++|++|++|++|.--...                        .+.++. | 
T Consensus       190 ~~~~l~nP~NPtG~~~s~~~~~~i~~~a~~~~~~vI~De~Y~~~~~~~~~~~s~~~~~~~~~~~~~~~~~vi~~~s~SK~  269 (428)
T d1iaya_         190 KGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKD  269 (428)
T ss_dssp             EEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTT
T ss_pred             eEEEEccCCCcccccccccccchhheeeccCcEEEEecccccccccCcccccccccccchhhccccccceEEEEecCCCc
Confidence            4444 44444 3455554   55668899999999999998743221                        112222 2 


Q ss_pred             ------CCchhhh---hHHHHHhhccCCCCCCCCcHHHHHHHHHHH--HHHhchhhHHHHHHHHHHHHHHHHHHHhCCCE
Q psy10669        174 ------TGEKILY---DYEEKINNAVFPSLQGGPHNHAIGAIATAM--LQAQSDEFKSYQAQVKANASHLSDEMIKRGYH  242 (337)
Q Consensus       174 ------~Gg~i~~---~l~~~i~~~~~p~~~g~~~~~~iaala~a~--~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~  242 (337)
                            +.|++..   ++.+.++......   ....+...++++.+  ....+...++.++.+.++.+.+.+.|+..|++
T Consensus       270 ~~~~GlRiG~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~~a~l~~~~~~~~~~~~~~~~l~~r~~~~~~~L~~~gi~  346 (428)
T d1iaya_         270 MGLPGFRVGIIYSFNDDVVNCARKMSSFG---LVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVVGIK  346 (428)
T ss_dssp             SSCGGGCEEEEEESCHHHHHHHHHHHTTS---CCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             ccCCCcccccccccccchhhhhhhhhccc---ccccccccchhhhhhhhccccccccccccccchhHHHHHHHHHhCCCE
Confidence                  2244443   3555554332222   22223333322222  12212233566777788888999999999998


Q ss_pred             EecCCCCCeEEEEEecCC----Ccc-hHH-HHHHHhhcCceecc
Q psy10669        243 VVTGGTDVHLILIDLRKN----KLT-GSK-VELVLEEIAIACNK  280 (337)
Q Consensus       243 v~~~~t~~h~v~V~~~~~----~~~-~~~-~~~~L~~~gI~v~~  280 (337)
                      +.. ...+..+++++...    ..+ ..+ +.++|+++||.+.+
T Consensus       347 ~~~-p~gg~f~w~~l~~~~~~~~~~~~~~l~~~Ll~~~gV~v~P  389 (428)
T d1iaya_         347 CLK-NNAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSP  389 (428)
T ss_dssp             BCC-CSSSSEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEECEE
T ss_pred             Eec-CCcceEEEEECccccccCCCCCHHHHHHHHHHhCCEEEEc
Confidence            864 34467788998642    111 122 34556778999876

>d2r5ea1 c.67.1.1 (A:12-429) Kynurenine--oxoglutarate transaminase I {Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]

Probab=98.12  E-value=0.00028  Score=65.79  Aligned_cols=260  Identities=9%  Similarity=0.034  Sum_probs=139.0

Q ss_pred             hhhhhcHHHHHHHHHHHhhcccceeeeccCCC--CCHHHHHHHhhhhhhc--cCCCCCCCcCcCccchHHHHHHHHHHHH
Q psy10669         10 TLAQTDPELYSLIKKEKHRQINGIELIASENF--TSLAVLECLGSCLQNK--YSEGLPGKRYYGGNQFIDEIEIVAQQRS   85 (337)
Q Consensus        10 ~l~~~d~~~~~~~~~e~~rq~~~i~l~asen~--~~p~V~~a~~~~l~~~--y~~g~~g~r~~~G~~~~~~lE~~~~~~~   85 (337)
                      .++...|.++.-+.+- ..+.+-|+|-..+=.  .|+.+++++...+.+.  ...+|+-   ..|....-  |.++ +.+
T Consensus         7 ~~~~~~~~~~~~~~~~-~~~~~~I~L~~G~Pd~~~p~~i~eal~~a~~~~~~~~~~Y~~---~~G~~~lR--eaiA-~~~   79 (418)
T d2r5ea1           7 RYQGSTKSVWVEYIQL-AAQYKPLNLGQGFPDYHAPKYALNALAAAANSPDPLANQYTR---GFGHPRLV--QALS-KLY   79 (418)
T ss_dssp             GGTTCCCCHHHHHHHH-HHHHCCEECSSSCCSSCCCHHHHHHHHHHHTCSCGGGGSCCC---TTCCHHHH--HHHH-HHH
T ss_pred             hhcCCCCCHHHHHHHH-hcCCCCEEccCCCCCCCCCHHHHHHHHHHHhCCCccCcCCCC---CCCCHHHH--HHHH-HHH
Confidence            3444445555322221 222356776654422  3688999887654321  0112211   12332221  2222 355


Q ss_pred             HhhcCCCCC-CCcceeecCCC-chhHHHHHHhhCCc--------------------------------------------
Q psy10669         86 LKAFNLDPE-QWGCNVQPYSG-SPANFAVCEKALPT--------------------------------------------  119 (337)
Q Consensus        86 a~lfg~~~~-~~~~~v~~~Sg-t~AN~~v~~aLl~~--------------------------------------------  119 (337)
                      .+.+|.+-. .  -+|..++| ++|...++.+++++                                            
T Consensus        80 ~~~~g~~~~p~--~~I~it~G~~~al~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~  157 (418)
T d2r5ea1          80 SQLVDRTINPM--TEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADW  157 (418)
T ss_dssp             HHHHTSCCCTT--TSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEESCCSSCEEGGGE
T ss_pred             HHHhCCCCCcc--ceEEEcCCCchhhhhhhhhccccccceeccccccchhhHHHHHcCCeEEEEEecccccccchhhhhh
Confidence            666676521 0  14888888 57888888899765                                            


Q ss_pred             -----cc--c---cccEEEEcCccc--ccccChHH---HHHHhhhcCCeEEEeccccccccc-----------------e
Q psy10669        120 -----NN--A---RFDFLSSGTTCY--SRCLDYAR---FRQICDETDSIMFADMSHISGLIA-----------------G  167 (337)
Q Consensus       120 -----~~--a---~pklII~~~S~~--~~~~d~~~---l~eia~~~ga~l~vD~AH~~Gli~-----------------g  167 (337)
                           ++  .   +++++++..-++  +...+-++   |.++|+++|++++.|+++.--...                 .
T Consensus       158 ~~~~~~~~~~~~~~~~~~~i~~p~NPtG~~~s~e~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~s~~~~~~~~~~~i  237 (418)
T d2r5ea1         158 VLDNNELEALFNEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTI  237 (418)
T ss_dssp             ECCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEE
T ss_pred             hhhHHHHhhhhhccccceecCCcCccccccccHHHHHHHhhhhhcCCeeeecccchhhhccCCCccccccccccccceee
Confidence                 00  0   145566543333  36666665   557789999999999998553322                 0


Q ss_pred             eeeec-c-------CCchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHh------chhhHHHHHHHHHHHHH
Q psy10669        168 VKGVT-K-------TGEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQ------SDEFKSYQAQVKANASH  231 (337)
Q Consensus       168 ~~~T~-~-------~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~------~~~~~~y~~~v~~na~~  231 (337)
                      +..+. |       +-|+++.  ++.+.+.....-...+.+. +...+++..+....      +...++.++....+.+.
T Consensus       238 ~~~S~SK~~~~pGlRiG~~~~~~~~i~~~~~~~~~~~~~~~~-~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~  316 (418)
T d2r5ea1         238 TIGSAGKTFSLTGWKIGWAYGPEALLKNLQMVHQNCVYTCAT-PIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDY  316 (418)
T ss_dssp             EEEEHHHHTTCGGGCCEEEESCHHHHHHHHHHHTTTTCSCCH-HHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHH
T ss_pred             eeecCCccccCCCcccccccccchhhhhhhhccccccccccc-chhhhccccccccccccccchhhHHHHHHHHHHhhhh
Confidence            11111 2       2356654  4655555432222233333 33333333332211      12235667777888889


Q ss_pred             HHHHHHhCCCEEecCCCCCeEEEEEecC-----------CCcchHHHHH-HHhhcCceecc
Q psy10669        232 LSDEMIKRGYHVVTGGTDVHLILIDLRK-----------NKLTGSKVEL-VLEEIAIACNK  280 (337)
Q Consensus       232 l~~~L~~~G~~v~~~~t~~h~v~V~~~~-----------~~~~~~~~~~-~L~~~gI~v~~  280 (337)
                      +.+.|.+.|+++..+ ..+-.+++++..           ...+..++.+ .|+++||.+.+
T Consensus       317 l~~~L~~~g~~~~~P-~gg~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~P  376 (418)
T d2r5ea1         317 MASFLAEVGMNPTVP-QGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIP  376 (418)
T ss_dssp             HHHHHHHTTCEEEEC-SBSSEEEEECGGGSTTCCGGGCCCSSHHHHHHHHHHHHHSEECBC
T ss_pred             HHhhHhhcCCcccCC-CceeEEEEEcccccccccchhcccccCHHHHHHHHHHHCCEEEeC
Confidence            999999999988652 335566788753           1223344444 45568999876

>d1xi9a_ c.67.1.1 (A:) Putative alanine aminotransferase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative alanine aminotransferase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=98.06  E-value=0.00025  Score=65.77  Aligned_cols=253  Identities=13%  Similarity=0.045  Sum_probs=131.8

Q ss_pred             HHHHHHHH--HHHhhcccc-eeeeccC----CC-CCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHh
Q psy10669         16 PELYSLIK--KEKHRQING-IELIASE----NF-TSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLK   87 (337)
Q Consensus        16 ~~~~~~~~--~e~~rq~~~-i~l~ase----n~-~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~   87 (337)
                      ..|.+++.  +|.+.+... |+|-..|    ++ .|+.+++++...+... ..+|+..   .|....   -+...+...+
T Consensus        13 ~~ir~i~~~a~~l~~~G~~vi~l~~G~P~~~df~~p~~i~~a~~~a~~~~-~~~Y~~~---~G~~~L---R~aia~~~~~   85 (395)
T d1xi9a_          13 YAIRDVVLPARELEKKGIKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEG-HNYYGDS---EGLPEL---RKAIVEREKR   85 (395)
T ss_dssp             C-------CHHHHHHTTCCCEECCCCCGGGTTCCCCHHHHHHHHHHHHTT-CCSCCCT---TCCHHH---HHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCCCeEECCCCCCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCC---CCCHHH---HHHHHHhhhh
Confidence            34555543  344444444 6666543    33 3788999998764321 1223222   233222   2111234455


Q ss_pred             hcCCCCCCCcceeecCCC-chhHHHHHHhhCCc-----------------------------------------cc---c
Q psy10669         88 AFNLDPEQWGCNVQPYSG-SPANFAVCEKALPT-----------------------------------------NN---A  122 (337)
Q Consensus        88 lfg~~~~~~~~~v~~~Sg-t~AN~~v~~aLl~~-----------------------------------------~~---a  122 (337)
                      .+|.+...  -++..++| .++...++.+++.+                                         ++   .
T Consensus        86 ~~g~~~~~--~~i~i~~G~~~~~~~~~~~~~~~Gd~vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~~~~~~  163 (395)
T d1xi9a_          86 KNGVDITP--DDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKI  163 (395)
T ss_dssp             HHCCCCCG--GGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHHHHHHC
T ss_pred             cccccccc--cccccccccchhhhhhhhhhcCCCCEEEEcCCccccchhhhhhcCCEEEEEeccccccccchHHHHHHhh
Confidence            56654321  25777777 57787788888764                                         00   0


Q ss_pred             --cccE-EEEcCcc-cccccChHH---HHHHhhhcCCeEEEeccccccccc---------------eeeeec-c------
Q psy10669        123 --RFDF-LSSGTTC-YSRCLDYAR---FRQICDETDSIMFADMSHISGLIA---------------GVKGVT-K------  173 (337)
Q Consensus       123 --~pkl-II~~~S~-~~~~~d~~~---l~eia~~~ga~l~vD~AH~~Gli~---------------g~~~T~-~------  173 (337)
                        ++++ +++++++ -+...+-++   |.++|+++|++++.|+.+.--...               .+..|. |      
T Consensus       164 ~~~~~~v~l~~P~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G  243 (395)
T d1xi9a_         164 TDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLTKDVPVIVMNGLSKVYFATG  243 (395)
T ss_dssp             CTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHCSSSCEEEEEESTTTTCCGG
T ss_pred             cccccEEEecCCCCCccchhhHHHHHHHHhhhhhcCeeEEeccccccccccccccchhhcCCCCCEEEEeCcchhcccch
Confidence              2444 4445544 235666554   557889999999999998653333               122222 2      


Q ss_pred             -CCchhhh--------hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEe
Q psy10669        174 -TGEKILY--------DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVV  244 (337)
Q Consensus       174 -~Gg~i~~--------~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~  244 (337)
                       +.|++..        .+.+..+....  ....++.+...+...++..- ....++.++.+.++.+.+.+.|.+.|...+
T Consensus       244 lRvG~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~  320 (395)
T d1xi9a_         244 WRLGYMYFVDPENKLSEVREAIDRLAR--IRLCPNTPAQFAAIAGLTGP-MDYLKEYMKKLKERRDYIYKRLNEIPGIST  320 (395)
T ss_dssp             GCCEEEEEECTTCTTHHHHHHHHHHHH--HTCCSCSHHHHHHHHHHHSC-CHHHHHHHHHHHHHHHHHHHHHHTSTTEEC
T ss_pred             hhcEeeEecCHHHHHHHHHHHHHHhhc--CCCCcCHHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHHHHHHHhCCCcee
Confidence             2344321        12222211100  11123333333333334322 234567788888999999999999765433


Q ss_pred             cCCCCCeEEEEEecCCC-cch-HHHHHHHhhcCceecc
Q psy10669        245 TGGTDVHLILIDLRKNK-LTG-SKVELVLEEIAIACNK  280 (337)
Q Consensus       245 ~~~t~~h~v~V~~~~~~-~~~-~~~~~~L~~~gI~v~~  280 (337)
                      ..+..+..+++++.... .+. ..+.+.|+++||.+.+
T Consensus       321 ~~p~gg~~~~~~l~~~~~~~~~~~~~~ll~~~gV~v~P  358 (395)
T d1xi9a_         321 TKPQGAFYIFPKIEVGPWKNDKEFVLDVLHNAHVLFVH  358 (395)
T ss_dssp             CCCCBSSEECCEECSCSCSSHHHHHHHHHHHHCEECEE
T ss_pred             cCCCeeEEEeEECCCCCCCCHHHHHHHHHHhCCEEEEc
Confidence            33344677888886432 233 3455667789999876

>d1vefa1 c.67.1.4 (A:9-395) Acetylornithine/acetyl-lysine aminotransferase ArgD {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Acetylornithine/acetyl-lysine aminotransferase ArgD
species: Thermus thermophilus [TaxId: 274]

Probab=98.05  E-value=6.3e-05  Score=70.31  Aligned_cols=143  Identities=11%  Similarity=0.098  Sum_probs=83.0

Q ss_pred             hHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeecc--CCchhhh------hHHHHHhhccCCCCCCCC
Q psy10669        140 YARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTK--TGEKILY------DYEEKINNAVFPSLQGGP  198 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~--~Gg~i~~------~l~~~i~~~~~p~~~g~~  198 (337)
                      ++.++++|+++|++||+|+-|+ .|=.+        +    ++..+|  .||+.+.      ++.+...+.....++ +.
T Consensus       200 l~~l~~lc~~~g~llI~DEV~tGfgR~G~~~~~~~~~v~PDi~~~gK~l~gG~~~~~~~~~~~~~~~~~~~~~g~T~-~g  278 (387)
T d1vefa1         200 LRAAREITQEKGALLILDEIQTGMGRTGKRFAFEHFGIVPDILTLAKALGGGVPLGVAVMREEVARSMPKGGHGTTF-GG  278 (387)
T ss_dssp             HHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECGGGGTTSSCEEEEEEHHHHHTSCTTSSCCSS-TT
T ss_pred             HHHHHHHHHHcCceEEecccccccCccCCCcccccCCcCCceeeecccCCCCccccccccceeeeeccccCCccccC-CC
Confidence            6678999999999999999986 44444        1    122223  2555432      233333333222223 33


Q ss_pred             cHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecC-CCCCeEEEEEecCCCcchHHHHHHHhhcCce
Q psy10669        199 HNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTG-GTDVHLILIDLRKNKLTGSKVELVLEEIAIA  277 (337)
Q Consensus       199 ~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~-~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~  277 (337)
                      |+-+.++..+.++.+.+   ++..+++.+..++|.+.|++..-+.+.. -...-+.-+++.+..  ...+.+.+.+.|+.
T Consensus       279 nPla~aaa~a~L~~l~~---~~~~~~v~~~g~~l~~~L~~l~~~~v~~vrg~Gl~~~ie~~~~~--~~~~~~~~~~~g~l  353 (387)
T d1vefa1         279 NPLAMAAGVAAIRYLER---TRLWERAAELGPWFMEKLRAIPSPKIREVRGMGLMVGLELKEKA--APYIARLEKEHRVL  353 (387)
T ss_dssp             CHHHHHHHHHHHHHHHH---HTTHHHHHHHHHHHHHHHHTSCCTTEEEEEEETTEEEEEESSCS--HHHHHHHHHHHCEE
T ss_pred             Ccchhhhcccchhhccc---ccccchHhhhhHHHHHHHHhcCCCceEEEeecceEEEEEEeCCc--hHHHHHHHHHCCCe
Confidence            66666666666766644   3567888899999999998742211110 001124446665543  45566666667887


Q ss_pred             eccCc--ccchhh
Q psy10669        278 CNKNT--GISLAA  288 (337)
Q Consensus       278 v~~~~--girig~  288 (337)
                      +.+..  .||+.-
T Consensus       354 ~~~~g~~~ir~~P  366 (387)
T d1vefa1         354 ALQAGPTVIRFLP  366 (387)
T ss_dssp             CEESSTTEEEECC
T ss_pred             EEecCCCEEEEEC
Confidence            76543  566653

>d1u08a_ c.67.1.1 (A:) Putative methionine aminotransferase YdbL {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative methionine aminotransferase YdbL
species: Escherichia coli [TaxId: 562]

Probab=97.95  E-value=0.00039  Score=63.96  Aligned_cols=239  Identities=13%  Similarity=0.087  Sum_probs=138.5

Q ss_pred             ccceeeeccCC--CCCHHHHHHHhhhhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhcCCCC-CCCcceeecCCC-
Q psy10669         30 INGIELIASEN--FTSLAVLECLGSCLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAFNLDP-EQWGCNVQPYSG-  105 (337)
Q Consensus        30 ~~~i~l~asen--~~~p~V~~a~~~~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lfg~~~-~~~~~~v~~~Sg-  105 (337)
                      .+.|+|-.-+=  -.|+.+++++...+.+. ..||+-   ..|....-  |..+ +.+.+.+|.+. +++  +|..++| 
T Consensus        26 ~~~i~l~~G~Pd~~~p~~i~~a~~~~~~~~-~~~Y~~---~~G~~~LR--eaia-~~~~~~~g~~~~~~~--~I~vt~G~   96 (382)
T d1u08a_          26 HQAINLSQGFPDFDGPRYLQERLAHHVAQG-ANQYAP---MTGVQALR--EAIA-QKTERLYGYQPDADS--DITVTAGA   96 (382)
T ss_dssp             TTCEECCCSSCSSCCCHHHHHHHHHHHHTT-CCSCCC---TTCCHHHH--HHHH-HHHHHHHSCCCCTTT--TEEEESSH
T ss_pred             CCCEEccCCCCCCCCCHHHHHHHHHHHhcC-CCCCCC---CcCCHHHH--HHHH-HHHHHHhCCCCCCCc--eEEeccch
Confidence            35677765443  24788889888765432 223321   22333332  2222 35556667653 222  5888888 


Q ss_pred             chhHHHHHHhhCCc----------------------------------------cc---c--cccEEEEc-Cccc-cccc
Q psy10669        106 SPANFAVCEKALPT----------------------------------------NN---A--RFDFLSSG-TTCY-SRCL  138 (337)
Q Consensus       106 t~AN~~v~~aLl~~----------------------------------------~~---a--~pklII~~-~S~~-~~~~  138 (337)
                      .+|...++.+++++                                        ++   .  ++++|++. +++- +...
T Consensus        97 ~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~l~~P~NPtG~v~  176 (382)
T d1u08a_          97 TEALYAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQPPHFRVDWQEFAALLSERTRLVILNTPHNPSATVW  176 (382)
T ss_dssp             HHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCTTTCCCCHHHHHHHCCTTEEEEEEESSCTTTCCCC
T ss_pred             HHHHHHHHhhcccccceEEEecccccchhhhhhhccccceecccccccccCCHHHHhhhhccCccEEEECCCCccccccc
Confidence            46888888999764                                        11   1  25555554 5442 3666


Q ss_pred             ChHHHH---HHhhhcCCeEEEeccccccccce------------------eeee-------ccCCchhhh--hHHHHHhh
Q psy10669        139 DYARFR---QICDETDSIMFADMSHISGLIAG------------------VKGV-------TKTGEKILY--DYEEKINN  188 (337)
Q Consensus       139 d~~~l~---eia~~~ga~l~vD~AH~~Gli~g------------------~~~T-------~~~Gg~i~~--~l~~~i~~  188 (337)
                      +.++++   ++|.+++..++.|+....-...+                  +.+.       +-+-|++++  ++.+.+..
T Consensus       177 ~~~~~~~l~~~~~~~~~~ii~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~pG~RiG~~v~~~~~~~~~~~  256 (382)
T d1u08a_         177 QQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPAPISAEIRK  256 (382)
T ss_dssp             CHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECCHHHHHHHHH
T ss_pred             ccccchhhhhhhccccceeeeecchhhccccccccccccccccccCcEEEEeeccccccCCcccchhhhccchhHHHHHh
Confidence            665555   66788899999998865433220                  1111       123466654  44443332


Q ss_pred             ccCCCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhCCCEEecCCCCCeEEEEEecCC-CcchHHH
Q psy10669        189 AVFPSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKRGYHVVTGGTDVHLILIDLRKN-KLTGSKV  267 (337)
Q Consensus       189 ~~~p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G~~v~~~~t~~h~v~V~~~~~-~~~~~~~  267 (337)
                      ... ....+++.+...+++.++..- .......+++..++.+.+.+.+...|+++.. ....--+++++... +.+..++
T Consensus       257 ~~~-~~~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~-p~gg~~~~~~~~~~~~~d~~e~  333 (382)
T d1u08a_         257 VHQ-YLTFSVNTPAQLALADMLRAE-PEHYLALPDFYRQKRDILVNALNESRLEILP-CEGTYFLLVDYSAVSTLDDVEF  333 (382)
T ss_dssp             HHH-HHTSSCCHHHHHHHHHHHHHC-THHHHTHHHHHHHHHHHHHHHTTSSSCEECC-CCBSSEEEEECTTTCCSCHHHH
T ss_pred             hhc-ccccccccccccccccccccc-hHHHHHHHHHHHhhhhhhhhhhccCCcEEec-CCceEEEEEecCCCCCCCHHHH
Confidence            211 111234445555555555543 3445677888888888898888889998864 23455678888753 3567666


Q ss_pred             HHH-HhhcCceecc
Q psy10669        268 ELV-LEEIAIACNK  280 (337)
Q Consensus       268 ~~~-L~~~gI~v~~  280 (337)
                      .+. |+++||.+.+
T Consensus       334 ~~~ll~e~gV~v~P  347 (382)
T d1u08a_         334 CQWLTQEHGVAAIP  347 (382)
T ss_dssp             HHHHHHHSCEECEE
T ss_pred             HHHHHHHCCEEEEc
Confidence            665 5778999875

>d1w7la_ c.67.1.1 (A:) Kynurenine--oxoglutarate transaminase I {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.93  E-value=0.00042  Score=64.63  Aligned_cols=262  Identities=12%  Similarity=0.084  Sum_probs=137.5

Q ss_pred             hhhhhhcHHHHHHHHHHHhhcccceeeeccCC--CCCHHHHHHHhhhhhhcc-CCCCCCCcCcCccchHHHHHHHHHHHH
Q psy10669          9 GTLAQTDPELYSLIKKEKHRQINGIELIASEN--FTSLAVLECLGSCLQNKY-SEGLPGKRYYGGNQFIDEIEIVAQQRS   85 (337)
Q Consensus         9 ~~l~~~d~~~~~~~~~e~~rq~~~i~l~asen--~~~p~V~~a~~~~l~~~y-~~g~~g~r~~~G~~~~~~lE~~~~~~~   85 (337)
                      +.|+..|+.-+.-..+- ..+.+-|+|-..+-  -.|+.|++++...+.+.. ..+|+-   -.|....  -|.++ +.+
T Consensus         5 ~r~~~~~~~~~~~~~~~-~~~~dvI~l~~G~p~~~~p~~v~~a~~~al~~~~~~~~Y~~---~~G~~~L--Reaia-~~~   77 (418)
T d1w7la_           5 RRLDGIDYNPWVEFVKL-ASEHDVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTK---TFGYPPL--TKILA-SFF   77 (418)
T ss_dssp             GGGTTCCCCTHHHHHHH-HHTSCCEECCCCSCSSCCCHHHHHHHHHHTSSCGGGGSCCC---TTCCHHH--HHHHH-HHH
T ss_pred             ccccCCCCCHHHHHHHH-hCCCCCEECCCCCCCCCCCHHHHHHHHHHHhCCCcccCCCC---CcCCHHH--HHHHH-HHH
Confidence            34555555443222211 22334577765552  237888888876544311 012211   1122222  12222 355


Q ss_pred             HhhcCCCCCCCcceeecCCC-chhHHHHHHhhCCc---------------------------------------------
Q psy10669         86 LKAFNLDPEQWGCNVQPYSG-SPANFAVCEKALPT---------------------------------------------  119 (337)
Q Consensus        86 a~lfg~~~~~~~~~v~~~Sg-t~AN~~v~~aLl~~---------------------------------------------  119 (337)
                      .+.+|.+.... .+|..++| ++|...++.+++++                                             
T Consensus        78 ~~~~g~~~~~~-~~I~it~G~~~al~~~~~~l~~~g~~vlv~~p~~~~y~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~  156 (418)
T d1w7la_          78 GELLGQEIDPL-RNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSN  156 (418)
T ss_dssp             HHHHTCCCCHH-HHEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEECC---CCSEEGGG
T ss_pred             HHHhCCCCCcc-cceeeccCcHHHHHHHHHhhccCCceeeccccccchhHHHHHHcCCEeeccccccccccccccccccC
Confidence            56667653200 25888888 57887788888764                                             


Q ss_pred             ------ccc---c--ccEEEEc-Ccc-cccccCh---HHHHHHhhhcCCeEEEeccccccccc-----------------
Q psy10669        120 ------NNA---R--FDFLSSG-TTC-YSRCLDY---ARFRQICDETDSIMFADMSHISGLIA-----------------  166 (337)
Q Consensus       120 ------~~a---~--pklII~~-~S~-~~~~~d~---~~l~eia~~~ga~l~vD~AH~~Gli~-----------------  166 (337)
                            +..   .  +++|++. +.+ -+...+-   .+|.++|++++++++.|+++.-=...                 
T Consensus       157 ~~~d~~~~~~~~~~~~~~i~~~~p~NPtG~~~s~~~~~~i~~~a~~~~v~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~  236 (418)
T d1w7la_         157 WQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERT  236 (418)
T ss_dssp             EECCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGE
T ss_pred             cccchhhhhccccccccceeccCcCCcccccccHHHHHHHHHHHHhcCCCchhhhhhHHhhcCCCCCCCHHHcccccccc
Confidence                  000   1  3455543 322 1344444   45667889999999999997331111                 


Q ss_pred             eee-eecc-------CCchhhh--hHHHHHhhccCCCCCCCCcHHHHHHHHHHHHHHh------chhhHHHHHHHHHHHH
Q psy10669        167 GVK-GVTK-------TGEKILY--DYEEKINNAVFPSLQGGPHNHAIGAIATAMLQAQ------SDEFKSYQAQVKANAS  230 (337)
Q Consensus       167 g~~-~T~~-------~Gg~i~~--~l~~~i~~~~~p~~~g~~~~~~iaala~a~~e~~------~~~~~~y~~~v~~na~  230 (337)
                      .+. |..|       +-|++++  ++.+.+.........+.+++. ..+.+.++..-.      ...+..+++.+.++.+
T Consensus       237 i~~~S~SK~~~~pG~RvG~~v~~~~~~~~l~~~~~~~~~~~~~~~-q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~r~  315 (418)
T d1w7la_         237 LTIGSAGKTFSATGWKVGWVLGPDHIMKHLRTVHQNSVFHCPTQS-QAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRD  315 (418)
T ss_dssp             EEEEEHHHHTTCGGGCCEEEECCHHHHHHHHHHHHTTTSCCCHHH-HHHHHHHHHHHHHTTTSTTSHHHHHHHHHHHHHH
T ss_pred             ceecccCccccCCCCcccccccchhhhhhhccccccccccccchh-hHHHHHHhhhccccccccccccccchhhhhhhhh
Confidence            011 1111       3355554  455554443222223333333 333333333211      1234567778888888


Q ss_pred             HHHHHHHhCCCEEecCCCCCeEEEEEecC-------------CCcchHHHHHHHhhcCceecc
Q psy10669        231 HLSDEMIKRGYHVVTGGTDVHLILIDLRK-------------NKLTGSKVELVLEEIAIACNK  280 (337)
Q Consensus       231 ~l~~~L~~~G~~v~~~~t~~h~v~V~~~~-------------~~~~~~~~~~~L~~~gI~v~~  280 (337)
                      .|.+.|.+.|+++... ...-.++++++.             ...+...+.++|+++||.+.+
T Consensus       316 ~l~~~L~~~g~~~~~P-~gg~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~P  377 (418)
T d1w7la_         316 HMIRSLQSVGLKPLIP-QGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIP  377 (418)
T ss_dssp             HHHHHHHTTTCEEEEC-SBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEE
T ss_pred             hhhhhhhhcCCcccCC-CceeEEEEECcccccccchhccccccccHHHHHHHHHHHCCEEEEc
Confidence            9999999999987652 335567777642             111233455667789999865

>d1s0aa_ c.67.1.4 (A:) Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA
species: Escherichia coli [TaxId: 562]

Probab=97.80  E-value=0.00047  Score=65.07  Aligned_cols=144  Identities=19%  Similarity=0.172  Sum_probs=88.4

Q ss_pred             hHHHHHHhhhcCCeEEEecccc-ccccc--------e----eeeecc--CCc-hhh-----h-hHHHHHhhc----cCCC
Q psy10669        140 YARFRQICDETDSIMFADMSHI-SGLIA--------G----VKGVTK--TGE-KIL-----Y-DYEEKINNA----VFPS  193 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g----~~~T~~--~Gg-~i~-----~-~l~~~i~~~----~~p~  193 (337)
                      ++.|+++|+++|++||+|+-|+ .|=.+        +    +...+|  .|| +-+     . ++.+.+.+.    .+.+
T Consensus       228 l~~lr~lc~~~gillI~DEV~tGfGRtG~~~~~~~~~v~PDi~~~gK~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~~  307 (429)
T d1s0aa_         228 LKRIRKICDREGILLIADEIATGFGRTGKLFACEHAEIAPDILCLGKALTGGTMTLSATLTTREVAETISNGEAGCFMHG  307 (429)
T ss_dssp             HHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTSSSCCEEEEECHHHHHHHHTSTTSSCSCC
T ss_pred             HHHHHHHHHHcCcceehhhccccccccccccccccceecccccccccccccccccccchhhHHHHHhccCCCCCcceeec
Confidence            5679999999999999999987 34444        1    111222  133 222     2 465555432    1111


Q ss_pred             CCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC----CC-EEecCCCCCeEEEEEecCCCcchHHHH
Q psy10669        194 LQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR----GY-HVVTGGTDVHLILIDLRKNKLTGSKVE  268 (337)
Q Consensus       194 ~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~----G~-~v~~~~t~~h~v~V~~~~~~~~~~~~~  268 (337)
                      .+-+.|+...|+....+..+.+   ++..+++.+..++|.++|.+.    .+ +|-+-|   -+.-+++.... +...+.
T Consensus       308 ~T~~gnp~~~aaa~a~L~~i~~---~~~~~~~~~~g~~l~~~L~~l~~~~~v~~vrg~G---l~~~~e~~~~~-~~~~~~  380 (429)
T d1s0aa_         308 PTFMGNPLACAAANASLAILES---GDWQQQVADIEVQLREQLAPARDAEMVADVRVLG---AIGVVETTHPV-NMAALQ  380 (429)
T ss_dssp             CTTTTCHHHHHHHHHHHHHHHT---CHHHHHHHHHHHHHHHHHGGGGGCTTEEEEEEET---TEEEEEESSCB-CHHHHH
T ss_pred             CCCCCCcccchhhhcccccccc---ccccchhhHHHHHHHHHHHHhccCCceEEEeecc---cEEEEEecCcc-cHHHHH
Confidence            2224566777777777777654   356888888889999998663    11 122211   24456676555 667788


Q ss_pred             HHHhhcCceeccCc-ccchhhhh
Q psy10669        269 LVLEEIAIACNKNT-GISLAAEI  290 (337)
Q Consensus       269 ~~L~~~gI~v~~~~-girig~~~  290 (337)
                      +.|.+.|+.+.+.. .||+.-|.
T Consensus       381 ~~~~~~Gl~~~~~g~~i~~~Ppl  403 (429)
T d1s0aa_         381 KFFVEQGVWIRPFGKLIYLMPPY  403 (429)
T ss_dssp             HHHHHTTEECCCBTTEEEECCCT
T ss_pred             HHHHHCCcEEEecCCEEEEeCCc
Confidence            88888899987644 57766443

>d1wyua1 c.67.1.7 (A:1-437) Glycine dehydrogenase (decarboxylating) subunit 1 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Glycine dehydrogenase subunits (GDC-P)
domain: Glycine dehydrogenase (decarboxylating) subunit 1
species: Thermus thermophilus [TaxId: 274]

Probab=97.72  E-value=0.00054  Score=64.86  Aligned_cols=252  Identities=12%  Similarity=0.090  Sum_probs=136.4

Q ss_pred             cHHHHHHHHHHHhhccc-ceeeeccC---CCCCHHHHHHHhh-hhhhccCCCCCCCcCcCccchHHHHHHHHHHHHHhhc
Q psy10669         15 DPELYSLIKKEKHRQIN-GIELIASE---NFTSLAVLECLGS-CLQNKYSEGLPGKRYYGGNQFIDEIEIVAQQRSLKAF   89 (337)
Q Consensus        15 d~~~~~~~~~e~~rq~~-~i~l~ase---n~~~p~V~~a~~~-~l~~~y~~g~~g~r~~~G~~~~~~lE~~~~~~~a~lf   89 (337)
                      .+|+...+.+=.+++.. .-++++--   -+.||.+.+.+.. .+.+.|-.--| . .-.|...   +-..-++.++++.
T Consensus        47 E~e~~r~~~~ls~kN~~~~~~fig~G~~~~~~p~~i~~~~~~~~~~t~ytPyqp-E-~sQG~Lq---~l~e~q~~l~elt  121 (437)
T d1wyua1          47 EWKVLEELRRLAAQNLPAHKAFLGGGVRSHHVPPVVQALAARGEFLTAYTPYQP-E-VSQGVLQ---ATFEYQTMIAELA  121 (437)
T ss_dssp             HHHHHHHHHHHHHTSCCCTTCCCCSSCCCCCCCHHHHHHHTSHHHHHCCSCCSG-G-GCHHHHH---HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCcCccccCcccCCceeCHHHHHHHhChhhhhhCCCcch-H-HHHHHHH---HHHHHHHHHHHhh
Confidence            45666666544444321 12445433   3447777554332 23334421111 1 1234422   2223356889999


Q ss_pred             CCCCCCCcceeecCCCchhH-HHHHHhh--CCc-----------------------------------------ccc-cc
Q psy10669         90 NLDPEQWGCNVQPYSGSPAN-FAVCEKA--LPT-----------------------------------------NNA-RF  124 (337)
Q Consensus        90 g~~~~~~~~~v~~~Sgt~AN-~~v~~aL--l~~-----------------------------------------~~a-~p  124 (337)
                      |.+.    ++.++.+|.+|- -++..+.  .++                                         +.. ..
T Consensus       122 Gmd~----~n~s~~~ga~a~~~~~~~~~~~~~~~~~~v~~~~~p~~~~v~~t~a~~~g~~vv~v~~~~~~~~~~~~~~~~  197 (437)
T d1wyua1         122 GLEI----ANASMYDGATALAEGVLLALRETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPLEGGRTPLPEVGEEV  197 (437)
T ss_dssp             TSSE----ECSCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEECCBTTBCCCCCCCTTE
T ss_pred             CCCc----cccCchHHHHHHHHHHHHHHhhhcccccccccccChHHhhhhhhhcccceeeEEeeecccccchhhhhccce
Confidence            9998    799999997663 3333322  110                                         000 12


Q ss_pred             -cEEEEcCcccccccChHHHHHHhhhcCCeEEEeccccc-cccc-----e---eeeec-----------cCCchhhh--h
Q psy10669        125 -DFLSSGTTCYSRCLDYARFRQICDETDSIMFADMSHIS-GLIA-----G---VKGVT-----------KTGEKILY--D  181 (337)
Q Consensus       125 -klII~~~S~~~~~~d~~~l~eia~~~ga~l~vD~AH~~-Gli~-----g---~~~T~-----------~~Gg~i~~--~  181 (337)
                       -++|..++.++..-|++.+.+++++.|+++++|+.-.+ |++.     |   +++.+           |.+|++.+  +
T Consensus       198 Aavmi~~Pnt~G~~ed~~~i~~~~h~~G~l~~~~ad~~al~~l~~Pg~~GaDi~~g~~q~fg~p~g~GGP~~G~~a~~~~  277 (437)
T d1wyua1         198 GAVVVQNPNFLGALEDLGPFAEAAHGAGALFVAVADPLSLGVLKPPGAYGADIAVGDGQSLGLPMGFGGPHFGFLATKKA  277 (437)
T ss_dssp             EEEEEESSCTTSBCCCHHHHHHHHHHTTCEEEEECCTTGGGTBCCHHHHTCSEEEEECTTTTCCCGGGCSCCEEEEECGG
T ss_pred             eEEEEccccccccccchHHHHHHhhhccceEEeeechhhhhccccccccccceEeeccceeccccCCCcCccccccccch
Confidence             34444577788777999999999999998888876532 2221     1   22211           22344432  1


Q ss_pred             HH----------------------------HHHhhccC-CCCCCCCcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHH
Q psy10669        182 YE----------------------------EKINNAVF-PSLQGGPHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHL  232 (337)
Q Consensus       182 l~----------------------------~~i~~~~~-p~~~g~~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l  232 (337)
                      +.                            +.|++... ..+.++.....+.+ ++-+..+-....++..++.+.||+||
T Consensus       278 l~r~lPgrivg~s~d~~G~~~~~l~lqtreqhIrRekatsnict~q~l~a~~a-~~Y~~~lG~~GL~~ia~~a~~~A~yl  356 (437)
T d1wyua1         278 FVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMG-AMYLAALGPEGLREVALKSVEMAHKL  356 (437)
T ss_dssp             GGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhccccccccccccccCCcccceeecccccccccccccccchhhHHHHHHHHH-HHHhhhcCcccHHHHHHHHHHHHHHH
Confidence            21                            12222111 11111211122211 12223332345688999999999999


Q ss_pred             HHHHHh-CCCEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceec
Q psy10669        233 SDEMIK-RGYHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACN  279 (337)
Q Consensus       233 ~~~L~~-~G~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~  279 (337)
                      +++|.+ .|++++....-=|-+.|+++   .+..++.++|.++||...
T Consensus       357 ~~~L~~~~g~~~~~~~~~f~ef~v~~~---~~~~~i~k~L~d~G~~~~  401 (437)
T d1wyua1         357 HALLLEVPGVRPFTPKPFFNEFALALP---KDPEAVRRALAERGFHGA  401 (437)
T ss_dssp             HHHHTTSTTCEECSCSSBCSEEEEECS---SCHHHHHHHHHHTTCCCC
T ss_pred             HHHhhhcCCeeccCCCCeeeEEEEECC---CCHHHHHHHHHhCCCCCC
Confidence            999998 58988753333466667654   367889999998898643

>d7aata_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chicken (Gallus gallus), mitochondria [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Chicken (Gallus gallus), mitochondria [TaxId: 9031]

Probab=97.68  E-value=0.0012  Score=60.96  Aligned_cols=69  Identities=19%  Similarity=0.165  Sum_probs=45.4

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHhCCCEE----ecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCcccchhhhhH
Q psy10669        216 DEFKSYQAQVKANASHLSDEMIKRGYHV----VTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNTGISLAAEIQ  291 (337)
Q Consensus       216 ~~~~~y~~~v~~na~~l~~~L~~~G~~v----~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~girig~~~~  291 (337)
                      ...+++++++.++-+.|.+.|.+.|...    +.. ...-.+++     +++...++++++++||++-+  |+||+...+
T Consensus       313 ~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~-~~G~F~~~-----~ls~e~~~~L~~e~gV~~~p--g~Ris~a~~  384 (401)
T d7aata_         313 VEVKGMADRIISMRTQLVSNLKKEGSSHNWQHITD-QIGMFCFT-----GLKPEQVERLTKEFSIYMTK--DGRISVAGV  384 (401)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHH-CCSSEEEC-----CCCHHHHHHHHHHHCEECCT--TCEEEGGGC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCCCcceECC-CCeEEEec-----CCCHHHHHHHHHhCCEEECC--CcEEEeccC
Confidence            3456778888889999999999976431    110 11112332     33566777778889999887  889975544


Q ss_pred             h
Q psy10669        292 A  292 (337)
Q Consensus       292 t  292 (337)
                      +
T Consensus       385 ~  385 (401)
T d7aata_         385 A  385 (401)
T ss_dssp             C
T ss_pred             C
Confidence            3

>d1sffa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 4-aminobutyrate aminotransferase, GABA-aminotransferase
species: Escherichia coli [TaxId: 562]

Probab=97.63  E-value=0.00016  Score=68.09  Aligned_cols=143  Identities=14%  Similarity=0.165  Sum_probs=81.2

Q ss_pred             hHHHHHHhhhcCCeEEEeccccc-cccc--------e----eeeecc--CCch-----hhh-hHHHHHhhccCCCCCCCC
Q psy10669        140 YARFRQICDETDSIMFADMSHIS-GLIA--------G----VKGVTK--TGEK-----ILY-DYEEKINNAVFPSLQGGP  198 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~~-Gli~--------g----~~~T~~--~Gg~-----i~~-~l~~~i~~~~~p~~~g~~  198 (337)
                      ++.|+++|+++|++||+|+-|+- |=.+        |    ++..+|  .||+     +.. ++.+.+.+....+++ +.
T Consensus       221 l~~l~~lc~~~gillI~DEV~tG~gR~g~~~a~~~~gv~PDi~~~gK~l~gG~P~~av~~~~~i~~~~~~~~~~~T~-~g  299 (425)
T d1sffa_         221 MQRLRALCDEHGIMLIADEVQSGAGRTGTLFAMEQMGVAPDLTTFAKSIAGGFPLAGVTGRAEVMDAVAPGGLGGTY-AG  299 (425)
T ss_dssp             HHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTSCCSEEEECGGGGTSSCCEEEEEEHHHHTTSCTTSBCCSS-SS
T ss_pred             HHHHHHHHHHcCceEEeccccccCCCcchhhHHHhcCCCccceecccccCCCcceEEEEEcHHHHHhhCCCCCCCCC-Cc
Confidence            45688999999999999999983 3333        1    111122  2343     322 455545544333444 45


Q ss_pred             cHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh----CCC--EEecCCCCCeEEEEEecCC---Cc-c---hH
Q psy10669        199 HNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK----RGY--HVVTGGTDVHLILIDLRKN---KL-T---GS  265 (337)
Q Consensus       199 ~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~----~G~--~v~~~~t~~h~v~V~~~~~---~~-~---~~  265 (337)
                      |+.++|+...++..+.+   +...+++.+..++|.+.|++    .++  +|-+-|.   +.-+.+...   .. +   ..
T Consensus       300 npl~~aaa~a~L~~i~~---~~~~~~~~~~g~~l~~~l~~~~~~~~~v~~vrg~Gl---~~~i~f~~~~~~~~~~~~~~~  373 (425)
T d1sffa_         300 NPIACVAALEVLKVFEQ---ENLLQKANDLGQKLKDGLLAIAEKHPEIGDVRGLGA---MIAIELFEDGDHNKPDAKLTA  373 (425)
T ss_dssp             CHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHTCTTEEEEEEETT---EEEEEEBGGGCTTSBCHHHHH
T ss_pred             CHHHHHHHHHHHHHHHH---hhhhhhhhhhhhhhhhhhhhhHhhCCceEEEEcccc---EEEEEEeccCccCCccHHHHH
Confidence            67777777777777654   34567777788888877765    333  1222122   333444321   11 1   23


Q ss_pred             HHHHHHhhcCceeccCc----ccchhhh
Q psy10669        266 KVELVLEEIAIACNKNT----GISLAAE  289 (337)
Q Consensus       266 ~~~~~L~~~gI~v~~~~----girig~~  289 (337)
                      .+.+.|.+.||.+.+..    .||+.-+
T Consensus       374 ~~~~~l~~~Gvl~~~~g~~~n~i~~~Pp  401 (425)
T d1sffa_         374 EIVARARDKGLILLSCGPYYNVLRILVP  401 (425)
T ss_dssp             HHHHHHHHTTEECEEESTTSCEEEECCC
T ss_pred             HHHHHHHHCCCEEeccCCCCCEEEEECC
Confidence            44555666799886532    4777644

>d1ohwa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 4-aminobutyrate aminotransferase, GABA-aminotransferase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.61  E-value=0.0017  Score=61.56  Aligned_cols=140  Identities=9%  Similarity=0.035  Sum_probs=79.6

Q ss_pred             hHHHHHHhhhcCCeEEEecccc-ccccc--------ee------eeecc--CCchhh-hhHHHHHhhccCCCCCCCCcHH
Q psy10669        140 YARFRQICDETDSIMFADMSHI-SGLIA--------GV------KGVTK--TGEKIL-YDYEEKINNAVFPSLQGGPHNH  201 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~-~Gli~--------g~------~~T~~--~Gg~i~-~~l~~~i~~~~~p~~~g~~~~~  201 (337)
                      +++|+++|+++|++||+|+-|+ .|=.|        ++      ...+|  .||.+. .+....-.......++ +.|+.
T Consensus       271 l~~lr~lc~~~gillI~DEV~tG~gRtG~~~~~e~~gi~~~PDiv~~gK~l~~g~~~~~~~~~~~~~~~~~~T~-~g~p~  349 (461)
T d1ohwa_         271 FRKLRDISRKHGCAFLVDEVQTGGGSTGKFWAHEHWGLDDPADVMTFSKKMMTGGFFHKEEFRPNAPYRIFNTW-LGDPS  349 (461)
T ss_dssp             HHHHHHHHHHTTCEEEEECTTTCSSTTSSSSGGGGGCCSSCCSEEEECGGGSSEEEEECGGGSCSSTTSSCCSC-SSCHH
T ss_pred             HHHHHHHHHhhCcceeccccccccccccccccccccccccCchhhhhhhccccccccccccccccccccccccc-ccccc
Confidence            6679999999999999999986 44333        11      11122  233332 2221111122222333 34455


Q ss_pred             HHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHhC-----C-C-EEecCCCCCeEEEEEecCCCcchHHHHHHHhhc
Q psy10669        202 AIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIKR-----G-Y-HVVTGGTDVHLILIDLRKNKLTGSKVELVLEEI  274 (337)
Q Consensus       202 ~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~~-----G-~-~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~  274 (337)
                      ..|+...++..+.+   +...+++.+..++|.++|.+.     . + +|-+-   .-+.-+++.+.. ...++...|.+.
T Consensus       350 ~~aaa~a~l~~i~~---~~l~~~~~~~g~~l~~~l~~l~~~~~~~i~~vrG~---Gl~~~ie~~~~~-~~~~i~~~~~~~  422 (461)
T d1ohwa_         350 KNLLLAEVINIIKR---EDLLSNAAHAGKVLLTGLLDLQARYPQFISRVRGR---GTFCSFDTPDES-IRNKLISIARNK  422 (461)
T ss_dssp             HHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHHCTTTCEEEEEE---TTEEEEECSSHH-HHHHHHHHHHHT
T ss_pred             cchhhcccchhhhh---hhHHHHHHHHHHHHHHHHHHHHhhCCCceEEeeee---eEEEEEEcCCHH-HHHHHHHHHHHC
Confidence            66655566666543   246777888888888888762     2 2 23221   124556665544 445666777778


Q ss_pred             CceeccCc--ccchh
Q psy10669        275 AIACNKNT--GISLA  287 (337)
Q Consensus       275 gI~v~~~~--girig  287 (337)
                      |+.+....  .|||.
T Consensus       423 Gll~~~~~~~~ir~~  437 (461)
T d1ohwa_         423 GVMLGGCGDKSIRFR  437 (461)
T ss_dssp             TEECEEETTTEEECC
T ss_pred             CeEEeeCCCCEEEEe
Confidence            99987533  57766

>d1zoda1 c.67.1.4 (A:3-433) Dialkylglycine decarboxylase {Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Dialkylglycine decarboxylase
species: Pseudomonas cepacia [TaxId: 292]

Probab=97.50  E-value=0.00068  Score=63.75  Aligned_cols=96  Identities=14%  Similarity=0.155  Sum_probs=56.0

Q ss_pred             hHHHHHHhhhcCCeEEEeccccc-cccc--------ee----eeecc--CCchh-----hh-hHHHHHhhc-cCCCCCCC
Q psy10669        140 YARFRQICDETDSIMFADMSHIS-GLIA--------GV----KGVTK--TGEKI-----LY-DYEEKINNA-VFPSLQGG  197 (337)
Q Consensus       140 ~~~l~eia~~~ga~l~vD~AH~~-Gli~--------g~----~~T~~--~Gg~i-----~~-~l~~~i~~~-~~p~~~g~  197 (337)
                      ++.|+++|+++|++||+|+-++- |=.+        |+    +..+|  .||+.     .. ++.+..... .+-+.+-+
T Consensus       224 l~~lr~lc~~~gillI~DEV~tG~gRtG~~~~~~~~gv~PDi~~~gK~l~gG~p~~av~~~~~~~~~~~~~~~~~~~T~~  303 (431)
T d1zoda1         224 MAALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDGVTPDILTLSKTLGAGLPLAAIVTSAAIEERAHELGYLFYTTHV  303 (431)
T ss_dssp             HHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECHHHHTTSSCEEEEECHHHHHHHHHTTCCCCCTTT
T ss_pred             HHHHHHHHHhcCceEEeccccccccccccccccccCCCCcchhccccccccccccceeeeeecchhhhhcccccccCCCC
Confidence            67899999999999999999982 4344        11    11112  13433     22 343333322 22222335


Q ss_pred             CcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh
Q psy10669        198 PHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK  238 (337)
Q Consensus       198 ~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~  238 (337)
                      .|+.+.|+..+.+..+.++   ...+++.+..+++.+.|++
T Consensus       304 g~pl~~aaa~a~l~~i~~~---~~~~~~~~~g~~l~~~l~~  341 (431)
T d1zoda1         304 SDPLPAAVGLRVLDVVQRD---GLVARANVMGDRLRRGLLD  341 (431)
T ss_dssp             TCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHH
T ss_pred             CCcchHHHHHHHHHHhhhh---hhhHHHHHHHHHHhhhhhh
Confidence            6667777776667666542   4566666666666666554

>d1bw0a_ c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Tyrosine aminotransferase (TAT)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=97.42  E-value=0.0054  Score=56.43  Aligned_cols=82  Identities=16%  Similarity=0.195  Sum_probs=46.8

Q ss_pred             CcHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHh-CCCEEecCCCCCeEEEEEecCC----CcchHHH-HHHH
Q psy10669        198 PHNHAIGAIATAMLQAQSDEFKSYQAQVKANASHLSDEMIK-RGYHVVTGGTDVHLILIDLRKN----KLTGSKV-ELVL  271 (337)
Q Consensus       198 ~~~~~iaala~a~~e~~~~~~~~y~~~v~~na~~l~~~L~~-~G~~v~~~~t~~h~v~V~~~~~----~~~~~~~-~~~L  271 (337)
                      +..+..+.++..+..-.+....+.++++.++.+.+.+.|.+ .|+.+..+ ...--+++.+...    ..+..++ .++|
T Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~l~~~~g~~~~~p-~gg~~l~~~~~~~~~~~~~~~~~~~~~ll  366 (412)
T d1bw0a_         288 PCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIGECIGLAPTMP-RGAMYLMSRIDLEKYRDIKTDVEFFEKLL  366 (412)
T ss_dssp             SCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECCC-CBTTEEEEEECGGGBSSCCSHHHHHHHHH
T ss_pred             CchhhhhhcccccccccccccccccchhHHHHHHHHHHHHHhcCceecCC-CCceEEEEeCChhhcCCCCCHHHHHHHHH
Confidence            44444444444332221233466777888888889999877 58876542 2233455555421    1134444 4556


Q ss_pred             hhcCceecc
Q psy10669        272 EEIAIACNK  280 (337)
Q Consensus       272 ~~~gI~v~~  280 (337)
                      +++||.+.+
T Consensus       367 ~~~gV~v~P  375 (412)
T d1bw0a_         367 EEENVQVLP  375 (412)
T ss_dssp             HHHCEECEE
T ss_pred             HhCCEEEEe
Confidence            678999976

>d1wyub1 c.67.1.7 (B:2-472) Glycine dehydrogenase subunit 2 (P-protein) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Glycine dehydrogenase subunits (GDC-P)
domain: Glycine dehydrogenase subunit 2 (P-protein)
species: Thermus thermophilus [TaxId: 274]

Probab=97.30  E-value=0.0075  Score=57.27  Aligned_cols=150  Identities=10%  Similarity=0.110  Sum_probs=88.1

Q ss_pred             EEEEcCcccccc-cChHHHHHHhhhcCCeEEEeccccccccc--------e---eeeec-----------cCCchhhh--
Q psy10669        126 FLSSGTTCYSRC-LDYARFRQICDETDSIMFADMSHISGLIA--------G---VKGVT-----------KTGEKILY--  180 (337)
Q Consensus       126 lII~~~S~~~~~-~d~~~l~eia~~~ga~l~vD~AH~~Gli~--------g---~~~T~-----------~~Gg~i~~--  180 (337)
                      ++|..++.++.. .+.+.+.+++++.|+.+++|.+....+.+        +   +++.+           |.-|++.+  
T Consensus       206 v~v~~p~~~g~~e~~~~~~~~~~h~~g~~~~~~~~~~~~~~~l~~p~~~g~div~vg~~q~~G~P~~~GGP~~G~~a~~~  285 (471)
T d1wyub1         206 LMLTNPNTLGLFERRILEISRLCKEAGVQLYYDGANLNAIMGWARPGDMGFDVVHLNLHKTFTVPHGGGGPGSGPVGVKA  285 (471)
T ss_dssp             EEECSSCTTSCCCTTHHHHHHHHHHHTCEEEEEGGGGGGTTTTCCHHHHTCSEEECCTTTTTCCCCTTSCCCCCCEEECG
T ss_pred             eeeccCCCcccccchhhhhHHHHHhccccccccccchhhhhhccccCcccccccccccccccccccccccccccceeehh
Confidence            444445556644 45778899999999999999886654433        1   12211           11233333  


Q ss_pred             hHHHHHh------------------hccCCCCCCCCcHHHHHHHHHH--HHHHhchhhHHHHHHHHHHHHHHHHHHHhCC
Q psy10669        181 DYEEKIN------------------NAVFPSLQGGPHNHAIGAIATA--MLQAQSDEFKSYQAQVKANASHLSDEMIKRG  240 (337)
Q Consensus       181 ~l~~~i~------------------~~~~p~~~g~~~~~~iaala~a--~~e~~~~~~~~y~~~v~~na~~l~~~L~~~G  240 (337)
                      ++..++-                  +.+.---..+.  ..+.+++++  +..+-....++..++.++||+|++++|.+.|
T Consensus       286 ~~~R~~PGRiV~~~~~~~~~~~~REqhIrRe~actn--qaL~al~A~vYlsllG~~GL~elA~~~~~~A~Yla~~L~~~G  363 (471)
T d1wyub1         286 HLAPYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYG--NFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKEKG  363 (471)
T ss_dssp             GGGGGCCSCEEEECSSCEEEECCCTTCCCCSSSTTS--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             hhhccCCCceecCCCccccccCCCcccccchhhhhh--hHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHhhcC
Confidence            2221100                  00110001222  223333332  3333345668999999999999999999999


Q ss_pred             CEEecCCCCCeEEEEEecCCCcchHHHHHHHhhcCcee
Q psy10669        241 YHVVTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIAC  278 (337)
Q Consensus       241 ~~v~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v  278 (337)
                      +++...+.--|-.+|.+ +.+++..++.+.|.+.||.-
T Consensus       364 ~~~~~~~~ff~EFvv~~-~~~~~~~~i~k~L~~~G~~~  400 (471)
T d1wyub1         364 YRVPYDGPSMHEFVAQP-PEGFRALDLAKGLLELGFHP  400 (471)
T ss_dssp             CBCSSCSSCCSCEEEBC-STTCCHHHHHHHHHHTTCCC
T ss_pred             ceeccCcceeeEEeecC-CCCCCHHHHHHHHHHcCCCC
Confidence            99876433445566665 34667778888888778864

>d1ajsa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig (Sus scrofa), cytosolic form [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Pig (Sus scrofa), cytosolic form [TaxId: 9823]

Probab=96.92  E-value=0.08  Score=48.23  Aligned_cols=67  Identities=12%  Similarity=0.022  Sum_probs=43.2

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHhCCCEE----ecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCcccchhhhh
Q psy10669        216 DEFKSYQAQVKANASHLSDEMIKRGYHV----VTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNTGISLAAEI  290 (337)
Q Consensus       216 ~~~~~y~~~v~~na~~l~~~L~~~G~~v----~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~girig~~~  290 (337)
                      .+.+.+++++.++.+.|.+.|.+.|..-    +.. ...-..+     .+++...+.++++++||++.+  |.||+...
T Consensus       321 ~~~~~~~~~l~~~r~~l~~~L~~~~~~~~~~~i~~-~~G~F~~-----~~ls~~~v~~L~~e~gV~~vp--g~Ri~~ag  391 (412)
T d1ajsa_         321 GNVKTMADRILSMRSELRARLEALKTPGTWNHITD-QIGMFSF-----TGLNPKQVEYLINQKHIYLLP--SGRINMCG  391 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHH-CCSSEEE-----CCCCHHHHHHHHHTTCEECCT--TSEEEGGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCCCeeeecC-CCeEEEe-----cCCCHHHHHHHHHhCCEEEeC--CCeEEecc
Confidence            3456677788888888999999876531    110 0111112     234567788888999999877  67886543

>d1yaaa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]

Probab=96.12  E-value=0.081  Score=48.35  Aligned_cols=67  Identities=13%  Similarity=0.063  Sum_probs=41.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhCCCEE----ecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCcccchhhhhH
Q psy10669        217 EFKSYQAQVKANASHLSDEMIKRGYHV----VTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNTGISLAAEIQ  291 (337)
Q Consensus       217 ~~~~y~~~v~~na~~l~~~L~~~G~~v----~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~girig~~~~  291 (337)
                      ..+.+++.+.++-+.|.+.|.+.|...    +.. ...--.++     +++...+.++++++||++-+  |.||+...+
T Consensus       322 ~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~~~~-~gG~F~~~-----~ls~e~~~~L~~e~~V~~~~--g~Ris~~g~  392 (412)
T d1yaaa_         322 DMVTMSSRITKMRHALRDHLVKLGTPGNWDHIVN-QCGMFSFT-----GLTPQMVKRLEETHAVYLVA--SGRASIAGL  392 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTCSSCCTHHHH-CCSSEEEC-----CCCHHHHHHHHHHHCEECCT--TSEEEGGGC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCCCCceeCC-CceEEEec-----CcCHHHHHHHHHhCCEEECC--CCEEEeccC
Confidence            345667777788888888888866421    110 00111222     34566777778889999887  778875433

>d2ay1a_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Paracoccus denitrificans [TaxId: 266]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Paracoccus denitrificans [TaxId: 266]

Probab=95.35  E-value=0.11  Score=46.88  Aligned_cols=67  Identities=15%  Similarity=0.105  Sum_probs=42.3

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHhCCC----EEec--CCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCcccchhhh
Q psy10669        216 DEFKSYQAQVKANASHLSDEMIKRGY----HVVT--GGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNTGISLAAE  289 (337)
Q Consensus       216 ~~~~~y~~~v~~na~~l~~~L~~~G~----~v~~--~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~girig~~  289 (337)
                      ...+.++++..++.+.|.+.|.+.|.    ....  +|.   ..++     +++...+.++++++||++-+  |.||+..
T Consensus       306 ~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~G~---F~~~-----~ls~~~~~~L~~~~~V~~~~--g~Ri~~a  375 (394)
T d2ay1a_         306 AELEAVRSGMLRLREQLAGELRDLSGSDRFGFVAEHRGM---FSRL-----GATPEQVKRIKEEFGIYMVG--DSRINIA  375 (394)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTHHHHCCSS---EEEC-----CCCHHHHHHHHHHHCEECCT--TCEEEGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCCceeeECCCcee---EEec-----CcCHHHHHHHHHhCCEEecC--CCEEEec
Confidence            34456777788888888888887542    2111  111   1222     33556777777889999887  7898765


Q ss_pred             hHh
Q psy10669        290 IQA  292 (337)
Q Consensus       290 ~~t  292 (337)
                      .++
T Consensus       376 ~l~  378 (394)
T d2ay1a_         376 GLN  378 (394)
T ss_dssp             GCC
T ss_pred             CCC
Confidence            443

>d3tata_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Escherichia coli [TaxId: 562]

Probab=95.35  E-value=0.13  Score=46.43  Aligned_cols=38  Identities=16%  Similarity=0.037  Sum_probs=26.2

Q ss_pred             ccEEEEc-Ccc-cccccChHH---HHHHhhhcCCeEEEecccc
Q psy10669        124 FDFLSSG-TTC-YSRCLDYAR---FRQICDETDSIMFADMSHI  161 (337)
Q Consensus       124 pklII~~-~S~-~~~~~d~~~---l~eia~~~ga~l~vD~AH~  161 (337)
                      ++++++. +++ -+...+-++   |.++|++++++++.|+++.
T Consensus       174 ~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~  216 (397)
T d3tata_         174 SIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQ  216 (397)
T ss_dssp             CCCEECSSSCSSSCCCCCHHHHHHHHHHHHHTTCCCEECBSCT
T ss_pred             cEEEEecCCCCCCCeeCCHHHHHHHHHHHhhcCeeEEeehhhh
Confidence            4566554 323 246666665   5578899999999999975

>d2q7wa1 c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Escherichia coli [TaxId: 562]

Probab=94.97  E-value=0.16  Score=45.74  Aligned_cols=65  Identities=11%  Similarity=0.146  Sum_probs=41.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhCCCEE----ecCCCCCeEEEEEecCCCcchHHHHHHHhhcCceeccCcccchhhh
Q psy10669        217 EFKSYQAQVKANASHLSDEMIKRGYHV----VTGGTDVHLILIDLRKNKLTGSKVELVLEEIAIACNKNTGISLAAE  289 (337)
Q Consensus       217 ~~~~y~~~v~~na~~l~~~L~~~G~~v----~~~~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~~~girig~~  289 (337)
                      ..++++++..++.+.|.+.|.+.|...    +.. ...-..++     +++...+.++++++||++-+  |-||...
T Consensus       310 ~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~-~~G~F~~~-----~l~~e~~~~L~~e~gV~~~~--g~Ri~~a  378 (396)
T d2q7wa1         310 ELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIK-QNGMFSFS-----GLTKEQVLRLREEFGVYAVA--SGRVNVA  378 (396)
T ss_dssp             HHHHC-CHHHHHHHHHHHHHHHTTCCSCCTHHHH-CCSSEEEC-----CCCHHHHHHHHHHHCEECCT--TCEEEGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCCCcceecC-CCeEEEee-----CCCHHHHHHHHHhCCEEECC--CCEEEec
Confidence            445677788888889999999987532    110 11112232     34567788888889998876  4577654

>d2hoxa1 c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativum) [TaxId: 4682]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Alliinase
species: Garlic (Allium sativum) [TaxId: 4682]

Probab=90.96  E-value=1.3  Score=40.59  Aligned_cols=61  Identities=2%  Similarity=-0.084  Sum_probs=37.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhCCCEEecC--------------CCCCeEEEEEecCCCcchHHHHHHHhhcCceecc
Q psy10669        218 FKSYQAQVKANASHLSDEMIKRGYHVVTG--------------GTDVHLILIDLRKNKLTGSKVELVLEEIAIACNK  280 (337)
Q Consensus       218 ~~~y~~~v~~na~~l~~~L~~~G~~v~~~--------------~t~~h~v~V~~~~~~~~~~~~~~~L~~~gI~v~~  280 (337)
                      ++..++.+.++-+.+.+.|.+.|.-....              .+..-..++.+...+  .....+.|.++||.+.+
T Consensus       315 ~~~~~~~l~~r~~~l~~~L~~~~~~~l~~~p~~~~~~f~~~~~~~~~~f~wl~~~~~~--~~~~~~lL~e~gI~v~p  389 (425)
T d2hoxa1         315 NTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEWEE--DKDCYQTFQNGRINTQN  389 (425)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTSSSEECCCCCSCEEETTTTEEECCCCSEEEEEECSGG--GCSHHHHHHHTTEECEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCceeeccCCccceeeeeeccCCCcceeeeeCCCCh--HHHHHHHHHhCCEEEEe
Confidence            44556777788888888888865432210              011223556665433  33456788899999987