Psyllid ID: psy10712

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70-----
Protein Sequence
MSDWMRTAVEEGNFLKDKLKCPNCSTNLGAFDYVSGHKCPCKQQCVPFIHLVKSKIDIQYANRSPENTSEHAEQS
Secondary Structure (PSIPRED)
ccHHHHHHHHcccccccEEEccccccccccccccccccccccccccccEEEEccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHcccccEccccccccccEEccEccccccccccccEEEcEEEEEcccccccccccccccccHHHccc
Coil and Loop (DISEMBL)
MSDWMRTAVEEGNflkdklkcpncstnlgafdyvsghkcpckqqcvpfihlvkskidiqyanrspentsehaeqs
Flexible Loop (DISEMBL)
MSDWMRTAVEEGnflkdklkcpnCSTNLGAFDYVSGHKCPCKQQCVPFIHLVKSKIDIQyanrspentsehaeqs
Low Complexity Region (SEG)
MSDWMRTAVEEGNFLKDKLKCPNCSTNLGAFDYVSGHKCPCKQQCVPFIHLVKSKIDIQYANRSPENTSEHAEQS
Disordered region (IsUnstruct)
********VEEGNFLKDKLKCPNCSTNLGAFDYVSGHKCPCKQQCVPFIHLVKSKIDIQY***************
Disordered Region (DISOPRED)
MSDWMRTAVEEGNFLKDKLKCPNCSTNLGAFDYVSGHKCPCKQQCVPFIHLVKSKIDIQ****************
Disordered Region (DISEMBL)
********VEEGNFLKDKLKCPNCSTNLGAFDYVSGHKCPCKQQCVPFIHLVKSKIDIQYAN*************
Disordered Region (DISPRO)
MSDWMRTAVEEGNFLKDKLKCPNCSTNLGAFDYVSGHKCPCKQQCVPFIHLVKSKIDIQYA**************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MSDWMRTAVEEGNFLKDKLKCPNCSTNLGAFDYVSGHKCPCKQQCVPFIHLVKSKIDIQYANRSPENTSEHAEQS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	75	2.2.26 [Sep-21-2011]
Q86T96	592	E3 ubiquitin-protein liga	no	N/A	0.76	0.096	0.355	3e-05
Q5RAK3	592	E3 ubiquitin-protein liga	yes	N/A	0.76	0.096	0.355	3e-05
Q3U827	592	E3 ubiquitin-protein liga	no	N/A	0.786	0.099	0.360	3e-05
Q02256	364	Tyrosine-protein phosphat	yes	N/A	0.706	0.145	0.351	5e-05

>sp|Q86T96|RN180_HUMAN E3 ubiquitin-protein ligase RNF180 OS=Homo sapiens GN=RNF180 PE=2 SV=2

 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 2/59 (3%)

Query: 1   MSDWMRTAVEEGNFLKDKLKCPNCSTNLGAFDYVSGHKCPCKQQCVPFIHLVKSKIDIQ 59
           + +W+   +++  +   KL CP C   LG F++VS  KC C Q  +  +HL KS+ D Q
Sbjct: 67  LPEWISCLIQKAQWTVGKLNCPFCGARLGGFNFVSTPKCSCGQ--LAAVHLSKSRTDYQ 123

E3 ubiquitin-protein ligase which promotes polyubiquitination and degradation by the proteasome pathway of ZIC2.
Homo sapiens (taxid: 9606)
EC: 6EC: .EC: 3EC: .EC: 2EC: .EC: -

>sp|Q5RAK3|RN180_PONAB E3 ubiquitin-protein ligase RNF180 OS=Pongo abelii GN=RNF180 PE=2 SV=1

 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 2/59 (3%)

Query: 1   MSDWMRTAVEEGNFLKDKLKCPNCSTNLGAFDYVSGHKCPCKQQCVPFIHLVKSKIDIQ 59
           + +W+   +++  +   KL CP C   LG F++VS  KC C Q  +  +HL KS+ D Q
Sbjct: 67  LPEWISCLIQKAQWTVGKLNCPFCGARLGGFNFVSTPKCSCGQ--LAAVHLSKSRTDYQ 123

E3 ubiquitin-protein ligase which promotes polyubiquitination and degradation by the proteasome pathway of ZIC2.

Pongo abelii (taxid: 9601)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

>sp|Q3U827|RN180_MOUSE E3 ubiquitin-protein ligase RNF180 OS=Mus musculus GN=Rnf180 PE=1 SV=2

 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 2/61 (3%)

Query: 1   MSDWMRTAVEEGNFLKDKLKCPNCSTNLGAFDYVSGHKCPCKQQCVPFIHLVKSKIDIQY 60
           + +W+   +++  +   KL CP C   LG F++VS  KC C Q  +  +HL KS+ D Q 
Sbjct: 68  LPEWISCLLQKAQWTVGKLNCPFCGARLGGFNFVSTPKCSCGQ--LAAVHLCKSRTDHQA 125

Query: 61  A 61
           A
Sbjct: 126 A 126

E3 ubiquitin-protein ligase which promotes polyubiquitination and degradation by the proteasome pathway of ZIC2.

Mus musculus (taxid: 10090)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

>sp|Q02256|PVH1_YEAST Tyrosine-protein phosphatase YVH1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YVH1 PE=1 SV=1

 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)

Query: 4   WMRTAVEEGNFLKDKLKCPNCSTNLGAFDYVSGHKCPCKQQCVPFIHLVKSKID 57
           WM+  ++    L+ K  CP CS+ +G +++  G +C C +  +P IHL  SK+D
Sbjct: 290 WMQPELQGKQELEGKFSCPGCSSKVGGYNW-KGSRCSCGKWVIPAIHLQTSKVD 342

May be directly involved in signal transduction and/or cell cycle regulation. It is necessary for maintaining growth rate or spore germination. Could show both activity toward tyrosine-protein phosphate as well as with serine-protein phosphate.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 4

EC: 8

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	75
253735789	117	uncharacterized protein LOC100302463 [Ac	0.76	0.487	0.526	1e-11
242018564	118	conserved hypothetical protein [Pediculu	0.826	0.525	0.403	1e-08
427782821	142	hypothetical protein [Rhipicephalus pulc	0.76	0.401	0.438	1e-08
442751517	146	Putative e3 ubiquitin-protein ligase [Ix	0.853	0.438	0.390	3e-08
241839162	146	conserved hypothetical protein [Ixodes s	0.853	0.438	0.390	5e-08
443709808	549	hypothetical protein CAPTEDRAFT_223896 [	0.906	0.123	0.338	9e-07
218156309	118	uncharacterized protein LOC100217359 [Na	0.8	0.508	0.416	1e-06
321462196	115	hypothetical protein DAPPUDRAFT_325511 [	0.72	0.469	0.407	1e-06
198436693	150	PREDICTED: similar to ring finger protei	0.76	0.38	0.385	4e-06
350529316	558	E3 ubiquitin-protein ligase RNF180 [Xeno	0.76	0.102	0.440	8e-06

>gi|253735789|ref|NP_001156678.1| uncharacterized protein LOC100302463 [Acyrthosiphon pisum] gi|239791652|dbj|BAH72264.1| ACYPI44311 [Acyrthosiphon pisum]

 Score = 73.9 bits (180), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 30/57 (52%), Positives = 43/57 (75%)

Query: 4   WMRTAVEEGNFLKDKLKCPNCSTNLGAFDYVSGHKCPCKQQCVPFIHLVKSKIDIQY 60
           W+ ++VEE ++ K KL CPNC+  +G+FD++ G KCPCK+  +P IHLVKSK DI +
Sbjct: 60  WINSSVEEDDWQKGKLSCPNCNLRVGSFDFIGGMKCPCKKYVLPQIHLVKSKTDIYF 116

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242018564|ref|XP_002429744.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212514756|gb|EEB17006.1| conserved hypothetical protein [Pediculus humanus corporis]

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 40/62 (64%)

Query: 1   MSDWMRTAVEEGNFLKDKLKCPNCSTNLGAFDYVSGHKCPCKQQCVPFIHLVKSKIDIQY 60
           +  W+   V++ N+ K K+ CPNC + LG+FD++SG+KC C    +P +H+VK K+D   
Sbjct: 57  LPSWISDLVDKANWTKGKVHCPNCQSRLGSFDFISGNKCQCGNNLLPPVHIVKCKVDCHV 116

Query: 61  AN 62
            N
Sbjct: 117 KN 118

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|427782821|gb|JAA56862.1| hypothetical protein [Rhipicephalus pulchellus]

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 39/57 (68%)

Query: 1   MSDWMRTAVEEGNFLKDKLKCPNCSTNLGAFDYVSGHKCPCKQQCVPFIHLVKSKID 57
           + DW+   +++G ++K KL CP C   LG+FD+V+G KC C +  +P IH+ KS+ID
Sbjct: 54  LPDWLSEQLDKGEWVKGKLYCPECRARLGSFDFVTGAKCDCDEFVLPPIHISKSRID 110

Source: Rhipicephalus pulchellus

Species: Rhipicephalus pulchellus

Genus: Rhipicephalus

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|442751517|gb|JAA67918.1| Putative e3 ubiquitin-protein ligase [Ixodes ricinus]

 Score = 62.4 bits (150), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 41/64 (64%)

Query: 1   MSDWMRTAVEEGNFLKDKLKCPNCSTNLGAFDYVSGHKCPCKQQCVPFIHLVKSKIDIQY 60
           +  W+   ++ G ++K KL CP+C+  LG FD+V+G KC C +  +P IH+ KS+ID   
Sbjct: 54  LPGWVTDQLDRGEWIKGKLYCPSCNARLGTFDFVTGAKCDCGEFVLPPIHISKSRIDCDQ 113

Query: 61  ANRS 64
           A ++
Sbjct: 114 AQKT 117

Source: Ixodes ricinus

Species: Ixodes ricinus

Genus: Ixodes

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|241839162|ref|XP_002415222.1| conserved hypothetical protein [Ixodes scapularis] gi|215509434|gb|EEC18887.1| conserved hypothetical protein [Ixodes scapularis]

 Score = 62.0 bits (149), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 41/64 (64%)

Query: 1   MSDWMRTAVEEGNFLKDKLKCPNCSTNLGAFDYVSGHKCPCKQQCVPFIHLVKSKIDIQY 60
           +  W+   ++ G ++K KL CP+C+  LG FD+V+G KC C +  +P IH+ KS+ID   
Sbjct: 54  LPGWVTDQLDGGEWIKGKLYCPSCNARLGTFDFVTGAKCDCGEFVLPPIHISKSRIDCDQ 113

Query: 61  ANRS 64
           A ++
Sbjct: 114 AQKT 117

Source: Ixodes scapularis

Species: Ixodes scapularis

Genus: Ixodes

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|443709808|gb|ELU04313.1| hypothetical protein CAPTEDRAFT_223896 [Capitella teleta]

 Score = 57.8 bits (138), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 23/68 (33%), Positives = 41/68 (60%)

Query: 3   DWMRTAVEEGNFLKDKLKCPNCSTNLGAFDYVSGHKCPCKQQCVPFIHLVKSKIDIQYAN 62
           DW+  A+E+ +FL+ KL CP C   +G FD+ +  +C C+   +P I + KS++D+  A 
Sbjct: 87  DWVLAALEQNSFLRGKLTCPRCEGRVGGFDFHNILRCQCRHHIIPSIRVSKSRVDLCTAT 146

Query: 63  RSPENTSE 70
            +  +T +
Sbjct: 147 LAAGSTEQ 154

Source: Capitella teleta

Species: Capitella teleta

Genus: Capitella

Family: Capitellidae

Order: Capitellida

Class: Polychaeta

Phylum: Annelida

Superkingdom: Eukaryota

>gi|218156309|ref|NP_001136164.1| uncharacterized protein LOC100217359 [Nasonia vitripennis]

 Score = 57.4 bits (137), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 35/60 (58%)

Query: 1   MSDWMRTAVEEGNFLKDKLKCPNCSTNLGAFDYVSGHKCPCKQQCVPFIHLVKSKIDIQY 60
           M DW+   V+  N+ K KL CP C   +G+FD+VS  KC C +   P I +  SKID+ +
Sbjct: 58  MPDWIHEVVDRENWTKGKLHCPLCHARIGSFDFVSSKKCNCGEYVPPPIRITYSKIDVPH 117

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321462196|gb|EFX73221.1| hypothetical protein DAPPUDRAFT_325511 [Daphnia pulex]

 Score = 57.4 bits (137), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 34/54 (62%)

Query: 4   WMRTAVEEGNFLKDKLKCPNCSTNLGAFDYVSGHKCPCKQQCVPFIHLVKSKID 57
           W+ T V+  ++ K K+ CP+C   LG FD++SG KC C+   +P + L  SK+D
Sbjct: 58  WLETLVQTSSWTKGKIVCPSCDARLGTFDFLSGQKCQCQLHVLPPVRLTSSKVD 111

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|198436693|ref|XP_002130546.1| PREDICTED: similar to ring finger protein 180 [Ciona intestinalis]

 Score = 55.5 bits (132), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 39/57 (68%)

Query: 4   WMRTAVEEGNFLKDKLKCPNCSTNLGAFDYVSGHKCPCKQQCVPFIHLVKSKIDIQY 60
           W+  A+++G++   KL CP+C+  LG+F+++   KC C++  VP + L KSK+DI +
Sbjct: 51  WVNDAIDKGDWKIGKLHCPSCNGRLGSFNFIQQQKCTCQKFVVPPVWLQKSKVDIGF 107

Source: Ciona intestinalis

Species: Ciona intestinalis

Genus: Ciona

Family: Cionidae

Order: Enterogona

Class: Ascidiacea

Phylum: Chordata

Superkingdom: Eukaryota

>gi|350529316|ref|NP_001107726.2| E3 ubiquitin-protein ligase RNF180 [Xenopus (Silurana) tropicalis]

 Score = 54.7 bits (130), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 2/59 (3%)

Query: 3   DWMRTAVEEGNFLKDKLKCPNCSTNLGAFDYVSGHKCPCKQQCVPFIHLVKSKIDIQYA 61
           DW++  VEE ++   KL CP C   LGAF++    KC C Q  V  ++L KSKID + A
Sbjct: 59  DWIKRLVEEAHWTTGKLNCPVCGARLGAFNFAGNLKCSCGQSTV--LYLCKSKIDYEAA 115

Source: Xenopus (Silurana) tropicalis

Species: Xenopus (Silurana) tropicalis

Genus: Xenopus

Family: Pipidae

Order: Anura

Class: Amphibia

Phylum: Chordata

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	75
UNIPROTKB|Q75CM1	356	AGOS_ACL102W "ACL102Wp" [Ashby	0.72	0.151	0.327	3.7e-06
UNIPROTKB|E1BMC5	591	RNF180 "Uncharacterized protei	0.76	0.096	0.355	4.9e-06
SGD|S000001465	364	YVH1 "Protein phosphatase invo	0.706	0.145	0.351	4.9e-06
UNIPROTKB|F1SKV2	521	RNF180 "Uncharacterized protei	0.76	0.109	0.355	5.3e-06
UNIPROTKB|Q86T96	592	RNF180 "E3 ubiquitin-protein l	0.76	0.096	0.355	6.3e-06
MGI|MGI:1919066	592	Rnf180 "ring finger protein 18	0.786	0.099	0.360	8e-06
UNIPROTKB|F1NAZ1	595	F1NAZ1 "Uncharacterized protei	0.76	0.095	0.372	8.1e-06
CGD|CAL0001708	322	YVH1 [Candida albicans (taxid:	0.693	0.161	0.333	1.1e-05
UNIPROTKB|Q59ZY7	322	YVH1 "Potential dual specifici	0.693	0.161	0.333	1.1e-05
UNIPROTKB|E2R485	580	RNF180 "Uncharacterized protei	0.76	0.098	0.355	1.6e-05

UNIPROTKB|Q75CM1 AGOS_ACL102W "ACL102Wp" [Ashbya gossypii ATCC 10895 (taxid:284811)]

 Score = 114 (45.2 bits), Expect = 3.7e-06, P = 3.7e-06
 Identities = 18/55 (32%), Positives = 33/55 (60%)

Query:     3 DWMRTAVEEGNFLKDKLKCPNCSTNLGAFDYVSGHKCPCKQQCVPFIHLVKSKID 57
             +WM+  ++    L+ K  CPNC+  +G +++  G +C C +  +P IHL  +K+D
Sbjct:   284 NWMKAELQGKQELEGKFSCPNCTQKVGGYNW-KGSRCSCGKWMIPAIHLQAAKVD 337

GO:0006470 "protein dephosphorylation" evidence=IBA

GO:0008138 "protein tyrosine/serine/threonine phosphatase activity" evidence=IBA

UNIPROTKB|E1BMC5 RNF180 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 116 (45.9 bits), Expect = 4.9e-06, P = 4.9e-06
 Identities = 21/59 (35%), Positives = 32/59 (54%)

Query:     1 MSDWMRTAVEEGNFLKDKLKCPNCSTNLGAFDYVSGHKCPCKQQCVPFIHLVKSKIDIQ 59
             + +W+   +++  +   KL CP C   LG F++VS  KC C Q     +HL KS+ D Q
Sbjct:    67 LPEWIHCLIQKAQWTVGKLNCPFCGARLGGFNFVSTPKCSCGQLAA--VHLSKSRTDYQ 123

GO:0032436 "positive regulation of proteasomal ubiquitin-dependent protein catabolic process" evidence=IEA

GO:0031624 "ubiquitin conjugating enzyme binding" evidence=IEA

GO:0031227 "intrinsic to endoplasmic reticulum membrane" evidence=IEA

GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

SGD|S000001465 YVH1 "Protein phosphatase involved in vegetative growth at low temperatures" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 113 (44.8 bits), Expect = 4.9e-06, P = 4.9e-06
 Identities = 19/54 (35%), Positives = 32/54 (59%)

Query:     4 WMRTAVEEGNFLKDKLKCPNCSTNLGAFDYVSGHKCPCKQQCVPFIHLVKSKID 57
             WM+  ++    L+ K  CP CS+ +G +++  G +C C +  +P IHL  SK+D
Sbjct:   290 WMQPELQGKQELEGKFSCPGCSSKVGGYNW-KGSRCSCGKWVIPAIHLQTSKVD 342

GO:0030476 "ascospore wall assembly" evidence=IGI;IMP

GO:0030687 "preribosome, large subunit precursor" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0000027 "ribosomal large subunit assembly" evidence=IGI;IMP

GO:0006470 "protein dephosphorylation" evidence=IEA;IDA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0006950 "response to stress" evidence=IEA

GO:0035335 "peptidyl-tyrosine dephosphorylation" evidence=IEA

GO:0004725 "protein tyrosine phosphatase activity" evidence=IEA;IDA

GO:0008138 "protein tyrosine/serine/threonine phosphatase activity" evidence=IEA;ISA;IBA

GO:0004721 "phosphoprotein phosphatase activity" evidence=IEA

GO:0016791 "phosphatase activity" evidence=IEA

GO:0016311 "dephosphorylation" evidence=IEA

GO:0007126 "meiosis" evidence=IMP

GO:0019933 "cAMP-mediated signaling" evidence=IGI;IMP

UNIPROTKB|F1SKV2 RNF180 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 115 (45.5 bits), Expect = 5.3e-06, P = 5.3e-06
 Identities = 21/59 (35%), Positives = 32/59 (54%)

Query:     1 MSDWMRTAVEEGNFLKDKLKCPNCSTNLGAFDYVSGHKCPCKQQCVPFIHLVKSKIDIQ 59
             + +W+   +++  +   KL CP C   LG F++VS  KC C Q     +HL KS+ D Q
Sbjct:    67 LPEWITCLIQKAQWTVGKLNCPFCGARLGGFNFVSTPKCSCGQLAA--VHLSKSRTDYQ 123

GO:0032436 "positive regulation of proteasomal ubiquitin-dependent protein catabolic process" evidence=IEA

GO:0031624 "ubiquitin conjugating enzyme binding" evidence=IEA

GO:0031227 "intrinsic to endoplasmic reticulum membrane" evidence=IEA

GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q86T96 RNF180 "E3 ubiquitin-protein ligase RNF180" [Homo sapiens (taxid:9606)]

 Score = 115 (45.5 bits), Expect = 6.3e-06, P = 6.3e-06
 Identities = 21/59 (35%), Positives = 32/59 (54%)

Query:     1 MSDWMRTAVEEGNFLKDKLKCPNCSTNLGAFDYVSGHKCPCKQQCVPFIHLVKSKIDIQ 59
             + +W+   +++  +   KL CP C   LG F++VS  KC C Q     +HL KS+ D Q
Sbjct:    67 LPEWISCLIQKAQWTVGKLNCPFCGARLGGFNFVSTPKCSCGQLAA--VHLSKSRTDYQ 123

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA

GO:0031227 "intrinsic to endoplasmic reticulum membrane" evidence=IEA

GO:0031624 "ubiquitin conjugating enzyme binding" evidence=IEA

GO:0032436 "positive regulation of proteasomal ubiquitin-dependent protein catabolic process" evidence=IEA

GO:0005635 "nuclear envelope" evidence=IEA

MGI|MGI:1919066 Rnf180 "ring finger protein 180" [Mus musculus (taxid:10090)]

 Score = 114 (45.2 bits), Expect = 8.0e-06, P = 8.0e-06
 Identities = 22/61 (36%), Positives = 33/61 (54%)

Query:     1 MSDWMRTAVEEGNFLKDKLKCPNCSTNLGAFDYVSGHKCPCKQQCVPFIHLVKSKIDIQY 60
             + +W+   +++  +   KL CP C   LG F++VS  KC C Q     +HL KS+ D Q 
Sbjct:    68 LPEWISCLLQKAQWTVGKLNCPFCGARLGGFNFVSTPKCSCGQLAA--VHLCKSRTDHQA 125

Query:    61 A 61
             A
Sbjct:   126 A 126

GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016567 "protein ubiquitination" evidence=IDA

GO:0016874 "ligase activity" evidence=IEA

GO:0031227 "intrinsic to endoplasmic reticulum membrane" evidence=IDA

GO:0031624 "ubiquitin conjugating enzyme binding" evidence=IDA

GO:0032436 "positive regulation of proteasomal ubiquitin-dependent protein catabolic process" evidence=IDA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|F1NAZ1 F1NAZ1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 114 (45.2 bits), Expect = 8.1e-06, P = 8.1e-06
 Identities = 22/59 (37%), Positives = 32/59 (54%)

Query:     3 DWMRTAVEEGNFLKDKLKCPNCSTNLGAFDYVSGHKCPCKQQCVPFIHLVKSKIDIQYA 61
             +W++  +E+  +   KL CP C   LG F++V   KC C Q  +  IH  KS+ D Q A
Sbjct:    68 EWVKCIIEKAQWTVGKLHCPFCEARLGGFNFVCNTKCSCGQ--LVNIHFCKSRTDYQAA 124

GO:0008270 "zinc ion binding" evidence=IEA

GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA

GO:0031227 "intrinsic to endoplasmic reticulum membrane" evidence=IEA

GO:0031624 "ubiquitin conjugating enzyme binding" evidence=IEA

GO:0032436 "positive regulation of proteasomal ubiquitin-dependent protein catabolic process" evidence=IEA

CGD|CAL0001708 YVH1 [Candida albicans (taxid:5476)]

 Score = 109 (43.4 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 18/54 (33%), Positives = 33/54 (61%)

Query:     4 WMRTAVEEGNFLKDKLKCPNCSTNLGAFDYVSGHKCPCKQQCVPFIHLVKSKID 57
             WM+  +++   ++ K  CP CS+ +G + +  G +C C +  VP IHL ++K+D
Sbjct:   261 WMKQELDKAE-MEGKFSCPKCSSKVGGYSW-RGSRCSCGKWMVPAIHLQEAKVD 312

GO:0008138 "protein tyrosine/serine/threonine phosphatase activity" evidence=ISS

GO:0009405 "pathogenesis" evidence=IMP

GO:0040010 "positive regulation of growth rate" evidence=IMP

GO:0071216 "cellular response to biotic stimulus" evidence=IMP

GO:0030447 "filamentous growth" evidence=IMP

GO:0005634 "nucleus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0030687 "preribosome, large subunit precursor" evidence=IEA

GO:0036180 "filamentous growth of a population of unicellular organisms in response to biotic stimulus" evidence=IMP

GO:0030476 "ascospore wall assembly" evidence=IEA

GO:0007126 "meiosis" evidence=IEA

GO:0000027 "ribosomal large subunit assembly" evidence=IEA

GO:0006470 "protein dephosphorylation" evidence=IEA

GO:0019933 "cAMP-mediated signaling" evidence=IEA

GO:0004725 "protein tyrosine phosphatase activity" evidence=IEA

UNIPROTKB|Q59ZY7 YVH1 "Potential dual specificity phosphatase" [Candida albicans SC5314 (taxid:237561)]

 Score = 109 (43.4 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 18/54 (33%), Positives = 33/54 (61%)

Query:     4 WMRTAVEEGNFLKDKLKCPNCSTNLGAFDYVSGHKCPCKQQCVPFIHLVKSKID 57
             WM+  +++   ++ K  CP CS+ +G + +  G +C C +  VP IHL ++K+D
Sbjct:   261 WMKQELDKAE-MEGKFSCPKCSSKVGGYSW-RGSRCSCGKWMVPAIHLQEAKVD 312

GO:0008138 "protein tyrosine/serine/threonine phosphatase activity" evidence=ISS

GO:0009405 "pathogenesis" evidence=IMP

GO:0030447 "filamentous growth" evidence=IMP

GO:0036180 "filamentous growth of a population of unicellular organisms in response to biotic stimulus" evidence=IMP

GO:0040010 "positive regulation of growth rate" evidence=IMP

GO:0071216 "cellular response to biotic stimulus" evidence=IMP

UNIPROTKB|E2R485 RNF180 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 111 (44.1 bits), Expect = 1.6e-05, P = 1.6e-05
 Identities = 21/59 (35%), Positives = 31/59 (52%)

Query:     1 MSDWMRTAVEEGNFLKDKLKCPNCSTNLGAFDYVSGHKCPCKQQCVPFIHLVKSKIDIQ 59
             + +W+   +++  +   KL CP C   LG F++VS  KC C Q     +HL KS  D Q
Sbjct:    67 LPEWINCLIQKAQWTVGKLNCPFCGARLGGFNFVSTPKCSCGQLAA--VHLSKSWTDYQ 123

GO:0008270 "zinc ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	75
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	92.18
smart00714	67	LITAF Possible membrane-associated motif in LPS-in	91.75
PRK00398	46	rpoP DNA-directed RNA polymerase subunit P; Provis	90.32
PF10601	73	zf-LITAF-like: LITAF-like zinc ribbon domain; Inte	90.21
TIGR02300	129	FYDLN_acid conserved hypothetical protein TIGR0230	89.96
PF12773	50	DZR: Double zinc ribbon	87.16
PF12760	46	Zn_Tnp_IS1595: Transposase zinc-ribbon domain; Int	85.69
PF13408	58	Zn_ribbon_recom: Recombinase zinc beta ribbon doma	82.38
PF10571	26	UPF0547: Uncharacterised protein family UPF0547; I	81.8
PF13717	36	zinc_ribbon_4: zinc-ribbon domain	81.4

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=92.18  E-value=0.094  Score=34.87  Aligned_cols=33  Identities=27%  Similarity=0.651  Sum_probs=27.3

Q ss_pred             ccceeeCCCCCCccceeecCCCCCCC-CCCcccce
Q psy10712         15 LKDKLKCPNCSTNLGAFDYVSGHKCP-CKQQCVPF   48 (75)
Q Consensus        15 ~~GKL~CP~C~aKLGsf~wv~G~kCs-CG~~v~Pa   48 (75)
                      +--|-.||+|++|.=-+|= .-.-|+ ||+-+.|.
T Consensus         6 lGtKR~Cp~CG~kFYDLnk-~PivCP~CG~~~~~~   39 (108)
T PF09538_consen    6 LGTKRTCPSCGAKFYDLNK-DPIVCPKCGTEFPPE   39 (108)
T ss_pred             cCCcccCCCCcchhccCCC-CCccCCCCCCccCcc
Confidence            3457889999999877777 678898 99988777

The function of members of this family is unknown.

>smart00714 LITAF Possible membrane-associated motif in LPS-induced tumor necrosis factor alpha factor (LITAF), also known as PIG7, and other animal proteins

Probab=91.75  E-value=0.086  Score=31.40  Aligned_cols=18  Identities=33%  Similarity=0.798  Sum_probs=15.4

Q ss_pred             ccceeeCCCCCCccceee
Q psy10712         15 LKDKLKCPNCSTNLGAFD   32 (75)
Q Consensus        15 ~~GKL~CP~C~aKLGsf~   32 (75)
                      .+-.-+||+|++.||.|+
T Consensus        49 kd~~H~Cp~C~~~lg~~~   66 (67)
T smart00714       49 KDVNHYCPNCGAFLGTYN   66 (67)
T ss_pred             cCccEECCCCCCEeEEec
Confidence            456689999999999985

>PRK00398 rpoP DNA-directed RNA polymerase subunit P; Provisional

Probab=90.32  E-value=0.37  Score=26.84  Aligned_cols=27  Identities=30%  Similarity=0.832  Sum_probs=18.4

Q ss_pred             eeCCCCCCccceeecCCCCCCC-CCCcc
Q psy10712         19 LKCPNCSTNLGAFDYVSGHKCP-CKQQC   45 (75)
Q Consensus        19 L~CP~C~aKLGsf~wv~G~kCs-CG~~v   45 (75)
                      ..||+|++.+=.-.-....+|+ ||.-+
T Consensus         4 y~C~~CG~~~~~~~~~~~~~Cp~CG~~~   31 (46)
T PRK00398          4 YKCARCGREVELDEYGTGVRCPYCGYRI   31 (46)
T ss_pred             EECCCCCCEEEECCCCCceECCCCCCeE
Confidence            5799999987433332367898 99654

>PF10601 zf-LITAF-like: LITAF-like zinc ribbon domain; InterPro: IPR006629 Members of this family display a conserved zinc ribbon structure [] with the motif C-XX-C- separated from the more C-terminal HX-C(P)X-C-X4-G-R motif by a variable region of usually 25-30 (hydrophobic) residues

Probab=90.21  E-value=0.16  Score=30.67  Aligned_cols=18  Identities=33%  Similarity=0.713  Sum_probs=15.2

Q ss_pred             ccceeeCCCCCCccceee
Q psy10712         15 LKDKLKCPNCSTNLGAFD   32 (75)
Q Consensus        15 ~~GKL~CP~C~aKLGsf~   32 (75)
                      .+=..+||+|++.||.|+
T Consensus        55 kd~~H~Cp~C~~~lg~~~   72 (73)
T PF10601_consen   55 KDVYHYCPNCGAFLGTYK   72 (73)
T ss_pred             cCceEECCCCCCEeEEEe
Confidence            455688999999999985

Although it belongs to one of the zinc finger's fold groups (zinc ribbon), this particular domain was first identified in LPS-induced tumour necrosis alpha factor (LITAF) which is produced in mammalian cells after being challenged with lipopolysaccharide (LPS). The hydrophobic region probably inserts into the membrane rather than traversing it. Such an insertion brings together the N- and C-terminal C-XX-C motifs to form a compact Zn2+-binding structure [].

>TIGR02300 FYDLN_acid conserved hypothetical protein TIGR02300

Probab=89.96  E-value=0.21  Score=34.70  Aligned_cols=35  Identities=23%  Similarity=0.295  Sum_probs=28.4

Q ss_pred             ccceeeCCCCCCccceeecCCCCCCC-CCCcccceEE
Q psy10712         15 LKDKLKCPNCSTNLGAFDYVSGHKCP-CKQQCVPFIH   50 (75)
Q Consensus        15 ~~GKL~CP~C~aKLGsf~wv~G~kCs-CG~~v~Paf~   50 (75)
                      +--|-.||+|++|.=-.|= .-.-|+ ||+-+.|...
T Consensus         6 lGtKr~Cp~cg~kFYDLnk-~p~vcP~cg~~~~~~~~   41 (129)
T TIGR02300         6 LGTKRICPNTGSKFYDLNR-RPAVSPYTGEQFPPEEA   41 (129)
T ss_pred             hCccccCCCcCccccccCC-CCccCCCcCCccCcchh
Confidence            3457889999999877777 788997 9999888843

Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues. The function of members of this family is unknown.

>PF12773 DZR: Double zinc ribbon

Probab=87.16  E-value=0.34  Score=26.92  Aligned_cols=32  Identities=38%  Similarity=0.694  Sum_probs=23.5

Q ss_pred             cceeeCCCCCCccceeecCCCCCCC-CCCcccce
Q psy10712         16 KDKLKCPNCSTNLGAFDYVSGHKCP-CKQQCVPF   48 (75)
Q Consensus        16 ~GKL~CP~C~aKLGsf~wv~G~kCs-CG~~v~Pa   48 (75)
                      .+...||+|+++|....= ....|+ ||+-+.+.
T Consensus        10 ~~~~fC~~CG~~l~~~~~-~~~~C~~Cg~~~~~~   42 (50)
T PF12773_consen   10 DDAKFCPHCGTPLPPPDQ-SKKICPNCGAENPPN   42 (50)
T ss_pred             ccccCChhhcCChhhccC-CCCCCcCCcCCCcCC
Confidence            456789999999984444 467895 99876554

>PF12760 Zn_Tnp_IS1595: Transposase zinc-ribbon domain; InterPro: IPR024442 This zinc binding domain is found in a range of transposase proteins such as ISSPO8, ISSOD11, ISRSSP2 etc

Probab=85.69  E-value=0.55  Score=26.23  Aligned_cols=14  Identities=21%  Similarity=0.873  Sum_probs=11.2

Q ss_pred             ccccceeeCCCCCCc
Q psy10712         13 NFLKDKLKCPNCSTN   27 (75)
Q Consensus        13 ~~~~GKL~CP~C~aK   27 (75)
                      -|-+| ..||+|++.
T Consensus        14 RW~~g-~~CP~Cg~~   27 (46)
T PF12760_consen   14 RWPDG-FVCPHCGST   27 (46)
T ss_pred             cCCCC-CCCCCCCCe
Confidence            46677 779999997

It may be a zinc-binding beta ribbon domain that could bind DNA.

>PF13408 Zn_ribbon_recom: Recombinase zinc beta ribbon domain

Probab=82.38  E-value=1.2  Score=24.72  Aligned_cols=21  Identities=24%  Similarity=0.594  Sum_probs=18.1

Q ss_pred             ccceeeCCCCCCccceeecCCC
Q psy10712         15 LKDKLKCPNCSTNLGAFDYVSG   36 (75)
Q Consensus        15 ~~GKL~CP~C~aKLGsf~wv~G   36 (75)
                      ..|+|.|+.|+.++-...+ .+
T Consensus         2 l~g~l~C~~CG~~m~~~~~-~~   22 (58)
T PF13408_consen    2 LSGLLRCGHCGSKMTRRKR-KG   22 (58)
T ss_pred             CCCcEEcccCCcEeEEEEC-CC
Confidence            5789999999999998888 44

>PF10571 UPF0547: Uncharacterised protein family UPF0547; InterPro: IPR018886 This domain may well be a type of zinc-finger as it carries two pairs of highly conserved cysteine residues though with no accompanying histidines

Probab=81.80  E-value=0.98  Score=23.14  Aligned_cols=21  Identities=33%  Similarity=0.936  Sum_probs=15.0

Q ss_pred             eCCCCCCccceeecCCCCCCC-CCCc
Q psy10712         20 KCPNCSTNLGAFDYVSGHKCP-CKQQ   44 (75)
Q Consensus        20 ~CP~C~aKLGsf~wv~G~kCs-CG~~   44 (75)
                      .||.|++.+    -++-..|+ ||.-
T Consensus         2 ~CP~C~~~V----~~~~~~Cp~CG~~   23 (26)
T PF10571_consen    2 TCPECGAEV----PESAKFCPHCGYD   23 (26)
T ss_pred             cCCCCcCCc----hhhcCcCCCCCCC
Confidence            488888888    22567787 8863

Several members are annotated as putative helicases.

>PF13717 zinc_ribbon_4: zinc-ribbon domain

Probab=81.40  E-value=0.92  Score=24.51  Aligned_cols=11  Identities=36%  Similarity=1.114  Sum_probs=8.9

Q ss_pred             eeeCCCCCCcc
Q psy10712         18 KLKCPNCSTNL   28 (75)
Q Consensus        18 KL~CP~C~aKL   28 (75)
                      +|.||+|+++.
T Consensus         2 ~i~Cp~C~~~y   12 (36)
T PF13717_consen    2 IITCPNCQAKY   12 (36)
T ss_pred             EEECCCCCCEE
Confidence            58899999863

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	75
d1pfva3	35	Methionyl-tRNA synthetase (MetRS), Zn-domain {Esch	86.97
d1rqga3	35	Methionyl-tRNA synthetase (MetRS), Zn-domain {Pyro	80.5
d1v87a_	114	Deltex protein 2 RING-H2 domain {Mouse (Mus muscul	80.29

>d1pfva3 g.41.1.1 (A:141-175) Methionyl-tRNA synthetase (MetRS), Zn-domain {Escherichia coli [TaxId: 562]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Methionyl-tRNA synthetase (MetRS), Zn-domain
family: Methionyl-tRNA synthetase (MetRS), Zn-domain
domain: Methionyl-tRNA synthetase (MetRS), Zn-domain
species: Escherichia coli [TaxId: 562]

Probab=86.97  E-value=0.16  Score=26.02  Aligned_cols=25  Identities=28%  Similarity=0.713  Sum_probs=19.3

Q ss_pred             eCCCCCCccceeecCCCCCC-CCCCcccceE
Q psy10712         20 KCPNCSTNLGAFDYVSGHKC-PCKQQCVPFI   49 (75)
Q Consensus        20 ~CP~C~aKLGsf~wv~G~kC-sCG~~v~Paf   49 (75)
                      .||+|++.=    = .|-+| .||+...|.=
T Consensus         4 ~CP~C~~~~----a-~GDqCe~CG~~~~p~e   29 (35)
T d1pfva3           4 TCPKCKSPD----Q-YGDNCEVCGATYSPTE   29 (35)
T ss_dssp             ECTTTCCSS----E-ETTBCTTTCCBCCGGG
T ss_pred             ECCCCCCcc----c-ccccHHHcCCcCCHHH
Confidence            599998752    3 59999 5999988753

>d1rqga3 g.41.1.1 (A:139-173) Methionyl-tRNA synthetase (MetRS), Zn-domain {Pyrococcus abyssi [TaxId: 29292]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Methionyl-tRNA synthetase (MetRS), Zn-domain
family: Methionyl-tRNA synthetase (MetRS), Zn-domain
domain: Methionyl-tRNA synthetase (MetRS), Zn-domain
species: Pyrococcus abyssi [TaxId: 29292]

Probab=80.50  E-value=0.61  Score=23.67  Aligned_cols=24  Identities=29%  Similarity=0.819  Sum_probs=18.6

Q ss_pred             eCCCCCCccceeecCCCCCCC-CCCcccce
Q psy10712         20 KCPNCSTNLGAFDYVSGHKCP-CKQQCVPF   48 (75)
Q Consensus        20 ~CP~C~aKLGsf~wv~G~kCs-CG~~v~Pa   48 (75)
                      .||+|++.=    = .|-||. ||+.+.|.
T Consensus         4 ~CP~C~~~~----a-~GDqCe~CG~~~~p~   28 (35)
T d1rqga3           4 TCPYCGAED----Q-KGDQCEVCGRPLTPE   28 (35)
T ss_dssp             BCSSSCCSC----C-CTTTCSSSCCCCCTT
T ss_pred             ECCCCCCCc----c-cCcchhhcCCccCHH
Confidence            499998653    2 599995 99998775

>d1v87a_ g.44.1.1 (A:) Deltex protein 2 RING-H2 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: RING/U-box
superfamily: RING/U-box
family: RING finger domain, C3HC4
domain: Deltex protein 2 RING-H2 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=80.29  E-value=0.23  Score=29.12  Aligned_cols=24  Identities=25%  Similarity=0.512  Sum_probs=17.0

Q ss_pred             chhhhHHHhcCccccceeeCCCCCCccce
Q psy10712          2 SDWMRTAVEEGNFLKDKLKCPNCSTNLGA   30 (75)
Q Consensus         2 m~WM~~~i~~~~~~~GKL~CP~C~aKLGs   30 (75)
                      .+||..  ..   ..+++.||-|.+.+|.
T Consensus        71 ~~Wl~~--~~---~~~~~~CP~CR~~~~~   94 (114)
T d1v87a_          71 LAMYCN--GN---KDGSLQCPSCKTIYGE   94 (114)
T ss_dssp             HHHHHH--TC---CSSCCBCTTTCCBSSS
T ss_pred             HHHHHh--cC---cCCCCccccccchhcc
Confidence            357764  11   4678899999998864