Psyllid ID: psy10759

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160--
Protein Sequence
MGSNTEWGSKSLKKVFSLGVLLFGIVLIQIDESASESISRKSDNGNQLIGFGQVILASVSSGFTSVYLERIYKADGDDTLLIKNLQLSLLSIPISMINVLLQDSDTVSQHGLFFGYDGLVLTDVLFNALGGLIISLVLKHHDNITKIFSTSVSIVVTFVLKK
Secondary Structure (PSIPRED)
cccccccccccHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
ccccccHccHHHHHHHHHHHHHHcEEEEEccccccccccccccccccHHHHHHHHHHHHHHcHHHHHHHHHHcccccccEHHHHHHHHHHHHHHHHHHHHHHcHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mgsntewgskSLKKVFSLGVLLFGIVLIQIdesasesisrksdngnqlIGFGQVILASVSSGFTSVYLERIykadgddtLLIKNLQLSLLSIPISMINVLlqdsdtvsqhglffgydgLVLTDVLFNALGGLIISLVLKHHDNITKIFSTSVSIVVTFVLKK
Flexible Loop (DISEMBL)
mgsntewgskslKKVFSLGVLLFGIVLIQIDESASESISRKSDNGNQLIGFGQVILASVSSGFTSVYLERIYKADGDDTLLIKNLQLSLLSIPISMINVLLQDSDTVSQHGLFFGYDGLVLTDVLFNALGGLIISLVLKHHDNITKIFSTSVSIVVTFVLKK
Low Complexity Region (SEG)
MGSNTEWGSKSLKKVFSLGVLLFGIVLIQIDESASESISRKSDNGNQLIGFGQVILASVSSGFTSVYLERIYKADGDDTlliknlqlsllsiPISMINVLLQDSDTVSQHGLFFGYDGLVLTDVLFNALGGLIISLVLKHHDNitkifstsvsivvtfvLKK
Disordered region (IsUnstruct)
***********LKKVFSLGVLLFGIVLIQID**************NQLIGFGQVILASVSSGFTSVYLERIYKADGDDTLLIKNLQLSLLSIPISMINVLLQDSDTVSQHGLFFGYDGLVLTDVLFNALGGLIISLVLKHHDNITKIFSTSVSIVVTFVL**
Disordered Region (DISOPRED)
*******GSKSLKKVFSLGVLLFGIVLI******************QLIGFGQVILASVSSGFTSVYLERIYKADGDDTLLIKNLQLSLLSIPISMINVLLQDSDTVSQHGLFFGYDGLVLTDVLFNALGGLIISLVLKHHDNITKIFSTSVSIVVTFVLKK
Disordered Region (DISEMBL)
********SKSLKKVFSLGVLLFGIVLIQIDES*********DNGNQLIGFGQVILASVSSGFTSVYLERIYKADGDDTLLIKNLQLSLLSIPISMINVLLQDSDTVSQHGLFFGYDGLVLTDVLFNALGGLIISLVLKHHDNITKIFSTSVSIVVTFVLKK
Disordered Region (DISPRO)
****TEWGSKSLKKVFSLGVLLFGIVLIQIDE************GNQLIGFGQVILASVSSGFTSVYLERIYKADGDDTLLIKNLQLSLLSIPISMINVLLQDSDTVSQHGLFFGYDGLVLTDVLFNALGGLIISLVLKHHDNITKIFSTSVSIVVTFVLKK
Transmembrane Helix (TMHMM)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHoo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHoo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGSNTEWGSKSLKKVFSLGVLLFGIVLIQIDESASESISRKSDNGNQLIGFGQVILASVSSGFTSVYLERIYKADGDDTLLIKNLQLSLLSIPISMINVLLQDSDTVSQHGLFFGYDGLVLTDVLFNALGGLIISLVLKHHDNITKIFSTSVSIVVTFVLKK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	162	2.2.26 [Sep-21-2011]
Q93890	368	UDP-galactose/UDP-N-acety	yes	N/A	0.882	0.388	0.329	3e-20
Q6AXR5	326	UDP-N-acetylglucosamine t	yes	N/A	0.864	0.429	0.368	2e-19
O77592	326	UDP-N-acetylglucosamine t	yes	N/A	0.864	0.429	0.368	2e-19
Q6YC49	326	UDP-N-acetylglucosamine t	no	N/A	0.864	0.429	0.368	3e-19
Q8R1T4	326	UDP-N-acetylglucosamine t	yes	N/A	0.864	0.429	0.368	5e-19
Q02334	355	UDP-galactose translocato	no	N/A	0.919	0.419	0.331	3e-18
Q9Y2D2	325	UDP-N-acetylglucosamine t	yes	N/A	0.858	0.427	0.375	4e-18
P87041	353	UDP-galactose transporter	yes	N/A	0.833	0.382	0.350	2e-17
Q58DA6	393	UDP-galactose translocato	no	N/A	0.864	0.356	0.349	4e-17
Q8WMS0	397	UDP-galactose translocato	no	N/A	0.864	0.352	0.349	7e-17

>sp|Q93890|SRF3_CAEEL UDP-galactose/UDP-N-acetylglucosamine transporter srf-3 OS=Caenorhabditis elegans GN=srf-3 PE=1 SV=5

 Score = 97.8 bits (242), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 91/155 (58%), Gaps = 12/155 (7%)

Query: 3   SNTEWGSKSLKKVFSLGVLLFGIVLIQIDESASESISRKSDNGNQLIGFGQVILASVSSG 62
           + T+W        F+L VL  G+ L+Q+  + ++  S +S     +       L    SG
Sbjct: 170 NRTQW--------FALAVLFVGVSLVQLQGTKAKESSGESPFVGFVAVVVACCL----SG 217

Query: 63  FTSVYLERIYKADGDDTLLIKNLQLSLLSIPISMINVLLQDSDTVSQHGLFFGYDGLVLT 122
           F  +Y E+I K     +L ++N+Q+++ SIP S   + +QDS TV+++GL +G+D +V  
Sbjct: 218 FAGIYFEKILKGSAPVSLWMRNVQMAVFSIPASFSAIYMQDSKTVNEYGLLYGFDSIVWL 277

Query: 123 DVLFNALGGLIISLVLKHHDNITKIFSTSVSIVVT 157
            VL+  +GGL +++ +K+ DNI K F+TSV+I+++
Sbjct: 278 TVLWYGVGGLSVAVCIKYADNIAKNFATSVAIILS 312

Acts as a transporter of both UDP-galactose and UDP-N-acetylglucosamine into the Golgi lumen.
Caenorhabditis elegans (taxid: 6239)

>sp|Q6AXR5|S35A3_RAT UDP-N-acetylglucosamine transporter OS=Rattus norvegicus GN=Slc35a3 PE=2 SV=1

 Score = 95.1 bits (235), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 52/141 (36%), Positives = 85/141 (60%), Gaps = 1/141 (0%)

Query: 17  SLGVLLFGIVLIQIDESASESISRKSDNGNQLIGFGQVILASVSSGFTSVYLERIYKADG 76
           SL +L+ G+  +Q    + E  S+    G+Q +G   V++A  SSGF  VY E+I K + 
Sbjct: 143 SLVILMAGVAFVQWPSDSQELNSKDLSTGSQFVGLMAVLIACFSSGFAGVYFEKILK-ET 201

Query: 77  DDTLLIKNLQLSLLSIPISMINVLLQDSDTVSQHGLFFGYDGLVLTDVLFNALGGLIISL 136
             ++ I+N+QL        ++ V + D + VS++G F GY+ L    V+  ALGGL+I+ 
Sbjct: 202 KQSVWIRNIQLGFFGSIFGLMGVYVYDGELVSKNGFFQGYNQLTWIVVVLQALGGLVIAA 261

Query: 137 VLKHHDNITKIFSTSVSIVVT 157
           V+K+ DNI K F+TS+SI+++
Sbjct: 262 VIKYADNILKGFATSLSIILS 282

Uridine diphosphate-N-acetylglucosamine transporter in the Golgi apparatus.

Rattus norvegicus (taxid: 10116)

>sp|O77592|S35A3_CANFA UDP-N-acetylglucosamine transporter OS=Canis familiaris GN=SLC35A3 PE=2 SV=1

 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 52/141 (36%), Positives = 85/141 (60%), Gaps = 1/141 (0%)

Query: 17  SLGVLLFGIVLIQIDESASESISRKSDNGNQLIGFGQVILASVSSGFTSVYLERIYKADG 76
           SL +L+ G+  +Q    + E  S++   G+Q +G   V+ A  SSGF  VY E+I K + 
Sbjct: 143 SLVILMTGVAFVQWPSDSQELDSKELSAGSQFVGLMAVLTACFSSGFAGVYFEKILK-ET 201

Query: 77  DDTLLIKNLQLSLLSIPISMINVLLQDSDTVSQHGLFFGYDGLVLTDVLFNALGGLIISL 136
             ++ I+N+QL        ++ V + D + VS++G F GY+ L    V+  ALGGL+I+ 
Sbjct: 202 KQSVWIRNIQLGFFGSIFGLMGVYIYDGELVSKNGFFQGYNRLTWIVVILQALGGLVIAA 261

Query: 137 VLKHHDNITKIFSTSVSIVVT 157
           V+K+ DNI K F+TS+SI+++
Sbjct: 262 VIKYADNILKGFATSLSIILS 282

Uridine diphosphate-N-acetylglucosamine transporter in the Golgi apparatus.

Canis familiaris (taxid: 9615)

>sp|Q6YC49|S35A3_BOVIN UDP-N-acetylglucosamine transporter OS=Bos taurus GN=SLC35A3 PE=2 SV=1

 Score = 94.4 bits (233), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 52/141 (36%), Positives = 85/141 (60%), Gaps = 1/141 (0%)

Query: 17  SLGVLLFGIVLIQIDESASESISRKSDNGNQLIGFGQVILASVSSGFTSVYLERIYKADG 76
           SL +L+ G+  +Q    + E  S++   G+Q +G   V+ A  SSGF  VY E+I K + 
Sbjct: 143 SLVILMTGVAFVQWPSDSQELNSKELSAGSQFVGLMAVLTACFSSGFAGVYFEKILK-ET 201

Query: 77  DDTLLIKNLQLSLLSIPISMINVLLQDSDTVSQHGLFFGYDGLVLTDVLFNALGGLIISL 136
             ++ I+N+QL        ++ V + D + VS++G F GY+ L    V+  ALGGL+I+ 
Sbjct: 202 KQSVWIRNIQLGFFGSIFGLMGVYVYDGELVSKNGFFQGYNRLTWIVVVLQALGGLVIAA 261

Query: 137 VLKHHDNITKIFSTSVSIVVT 157
           V+K+ DNI K F+TS+SI+++
Sbjct: 262 VIKYADNILKGFATSLSIILS 282

Uridine diphosphate-N-acetylglucosamine transporter in the Golgi apparatus.

Bos taurus (taxid: 9913)

>sp|Q8R1T4|S35A3_MOUSE UDP-N-acetylglucosamine transporter OS=Mus musculus GN=Slc35a3 PE=2 SV=1

 Score = 93.6 bits (231), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 52/141 (36%), Positives = 83/141 (58%), Gaps = 1/141 (0%)

Query: 17  SLGVLLFGIVLIQIDESASESISRKSDNGNQLIGFGQVILASVSSGFTSVYLERIYKADG 76
           SL +L+ G+  +Q    + E  S+    G+Q +G   V+ A  SSGF  VY E+I K + 
Sbjct: 143 SLVILMAGVAFVQWPSDSQELNSKDLSTGSQFVGLMAVLTACFSSGFAGVYFEKILK-ET 201

Query: 77  DDTLLIKNLQLSLLSIPISMINVLLQDSDTVSQHGLFFGYDGLVLTDVLFNALGGLIISL 136
             ++ I+N+QL        ++ V + D + VS++G F GY+ L    V   ALGGL+I+ 
Sbjct: 202 KQSVWIRNIQLGFFGSIFGLMGVYVYDGELVSKNGFFQGYNQLTWIVVALQALGGLVIAA 261

Query: 137 VLKHHDNITKIFSTSVSIVVT 157
           V+K+ DNI K F+TS+SI+++
Sbjct: 262 VIKYADNILKGFATSLSIILS 282

Uridine diphosphate-N-acetylglucosamine transporter in the Golgi apparatus.

Mus musculus (taxid: 10090)

>sp|Q02334|UGTP1_CAEEL UDP-galactose translocator 1 OS=Caenorhabditis elegans GN=ugtp-1 PE=3 SV=2

 Score = 90.9 bits (224), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 87/151 (57%), Gaps = 2/151 (1%)

Query: 11  SLKKVFSLGVLLFGIVLIQIDE-SASESISRKSDNGNQLIGFGQVILASVSSGFTSVYLE 69
           S ++  ++ +L+FG+  +Q++  SASE+ +++    N ++G   V+   V++GF  VY E
Sbjct: 173 STRRWMAITLLMFGVAFVQMNNVSASEANTKRETAENYIVGLSAVLATCVTAGFAGVYFE 232

Query: 70  RIYKADGDDTLLIKNLQLSLLSIPISMINVLLQDSDTVSQHGLFFGYDGLVLTDVLFNAL 129
           ++ K  G     I+N+Q+    + IS     L D   +S  G FFGY   V   V+   +
Sbjct: 233 KMLKDGGSTPFWIRNMQMYSCGV-ISASIACLTDFSRISDKGFFFGYTDKVWAVVILLGV 291

Query: 130 GGLIISLVLKHHDNITKIFSTSVSIVVTFVL 160
           GGL ISLV+++ DN+ K  +++VSI++  VL
Sbjct: 292 GGLYISLVMRYLDNLYKSMASAVSIILVVVL 322

Caenorhabditis elegans (taxid: 6239)

>sp|Q9Y2D2|S35A3_HUMAN UDP-N-acetylglucosamine transporter OS=Homo sapiens GN=SLC35A3 PE=2 SV=1

 Score = 90.5 bits (223), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 53/141 (37%), Positives = 86/141 (60%), Gaps = 2/141 (1%)

Query: 17  SLGVLLFGIVLIQIDESASESISRKSDNGNQLIGFGQVILASVSSGFTSVYLERIYKADG 76
           SL +L+ G+  +Q   S S+  S++   G+Q +G   V+ A  SSGF  VY E+I K + 
Sbjct: 143 SLVILMTGVAFVQWP-SDSQLDSKELSAGSQFVGLMAVLTACFSSGFAGVYFEKILK-ET 200

Query: 77  DDTLLIKNLQLSLLSIPISMINVLLQDSDTVSQHGLFFGYDGLVLTDVLFNALGGLIISL 136
             ++ I+N+QL        ++ V + D + VS++G F GY+ L    V+  ALGGL+I+ 
Sbjct: 201 KQSVWIRNIQLGFFGSIFGLMGVYIYDGELVSKNGFFQGYNRLTWIVVVLQALGGLVIAA 260

Query: 137 VLKHHDNITKIFSTSVSIVVT 157
           V+K+ DNI K F+TS+SI+++
Sbjct: 261 VIKYADNILKGFATSLSIILS 281

Uridine diphosphate-N-acetylglucosamine transporter in the Golgi apparatus.

Homo sapiens (taxid: 9606)

>sp|P87041|GMS1_SCHPO UDP-galactose transporter OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gms1 PE=2 SV=3

 Score = 88.2 bits (217), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 81/137 (59%), Gaps = 2/137 (1%)

Query: 14  KVFSLGVLLFGIVLIQIDESASESISRKSDNGNQLIGFGQVILASVSSGFTSVYLERIYK 73
           K FSL +L  GI ++Q+    S+     +   N + GF  V++A + SG   VY E++ K
Sbjct: 151 KWFSLFLLTGGIAIVQLQNLNSDD-QMSAGPMNPVTGFSAVLVACLISGLAGVYFEKVLK 209

Query: 74  ADGDDTLLIKNLQLSLLSIPISMINVLLQDSDTVSQHGLFFGYDGLVLTDVLFNALGGLI 133
            D + +L ++N+QLS  S+   +  +L++D   ++++G FFGY+ +V   +L  A GG+I
Sbjct: 210 -DTNPSLWVRNVQLSFFSLFPCLFTILMKDYHNIAENGFFFGYNSIVWLAILLQAGGGII 268

Query: 134 ISLVLKHHDNITKIFST 150
           ++L +   DNI K FST
Sbjct: 269 VALCVAFADNIMKNFST 285

Essential for the transport of UDP-galactose into the lumen of Golgi apparatus.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q58DA6|S35A2_BOVIN UDP-galactose translocator OS=Bos taurus GN=SLC35A2 PE=2 SV=1

 Score = 87.0 bits (214), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 81/143 (56%), Gaps = 3/143 (2%)

Query: 17  SLGVLLFGIVLIQIDESASESISRKSDNGNQLIGFGQVILASVSSGFTSVYLERIYKADG 76
           SL +L  G+ ++Q  ++      R  D  N  +G   V+ + +SSGF  VY E+I K   
Sbjct: 171 SLLLLFTGVAIVQAQQAGGGG-PRPLDQ-NPGVGLAAVVASCLSSGFAGVYFEKILKGS- 227

Query: 77  DDTLLIKNLQLSLLSIPISMINVLLQDSDTVSQHGLFFGYDGLVLTDVLFNALGGLIISL 136
             ++ ++NLQL L    + ++ +   +   V+  G FFGY   V   VL  A GGL++++
Sbjct: 228 SGSVWLRNLQLGLFGTALGLVGLWWAEGTAVTHRGFFFGYTPAVWGVVLNQAFGGLLVAV 287

Query: 137 VLKHHDNITKIFSTSVSIVVTFV 159
           V+K+ DNI K F+TS+SIV++ V
Sbjct: 288 VVKYADNILKGFATSLSIVLSTV 310

Transports nucleotide sugars from the cytosol into Golgi vesicles where glycosyltransferases function.

Bos taurus (taxid: 9913)

>sp|Q8WMS0|S35A2_CANFA UDP-galactose translocator OS=Canis familiaris GN=SLC35A2 PE=2 SV=2

 Score = 86.7 bits (213), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 81/143 (56%), Gaps = 3/143 (2%)

Query: 17  SLGVLLFGIVLIQIDESASESISRKSDNGNQLIGFGQVILASVSSGFTSVYLERIYKADG 76
           SL +L  G+ ++Q  ++      R  D  N   G   V+ + +SSGF  VY E+I K   
Sbjct: 171 SLLLLFTGVAIVQAQQAGGGG-PRPLDQ-NPGAGLAAVVASCLSSGFAGVYFEKILKGS- 227

Query: 77  DDTLLIKNLQLSLLSIPISMINVLLQDSDTVSQHGLFFGYDGLVLTDVLFNALGGLIISL 136
             ++ ++NLQL L    + ++ +   +   V++ G FFGY   V   VL  A GGL++++
Sbjct: 228 SGSVWLRNLQLGLFGTALGLVGLWWAEGTAVARRGFFFGYTPAVWGVVLNQAFGGLLVAV 287

Query: 137 VLKHHDNITKIFSTSVSIVVTFV 159
           V+K+ DNI K F+TS+SIV++ V
Sbjct: 288 VVKYADNILKGFATSLSIVLSTV 310

Transports nucleotide sugars from the cytosol into Golgi vesicles where glycosyltransferases function.

Canis familiaris (taxid: 9615)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	162
332374060	360	unknown [Dendroctonus ponderosae]	0.907	0.408	0.397	9e-24
268569380	367	C. briggsae CBR-SRF-3 protein [Caenorhab	0.882	0.389	0.361	3e-23
308491863	367	hypothetical protein CRE_10322 [Caenorha	0.882	0.389	0.361	3e-23
308452129	328	CRE-SRF-3 protein [Caenorhabditis remane	0.882	0.435	0.354	6e-23
380013404	332	PREDICTED: UDP-galactose translocator-li	0.901	0.439	0.378	6e-23
341881221	367	CBN-SRF-3 protein [Caenorhabditis brenne	0.882	0.389	0.354	9e-23
66533109	332	PREDICTED: UDP-galactose translocator [A	0.901	0.439	0.365	1e-22
256072017	363	sugar transporter [Schistosoma mansoni]	0.932	0.415	0.382	2e-22
324513367	383	UDP-galactose/UDP-N-acetylglucosamine tr	0.888	0.375	0.346	6e-22
321463852	332	hypothetical protein DAPPUDRAFT_214678 [	0.882	0.430	0.353	8e-22

>gi|332374060|gb|AEE62171.1| unknown [Dendroctonus ponderosae]

 Score =  115 bits (287), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 62/156 (39%), Positives = 96/156 (61%), Gaps = 9/156 (5%)

Query: 4   NTEWGSKSLKKVFSLGVLLFGIVLIQIDESASESISRKSDNGNQLIGFGQVILASVSSGF 63
            T+W         SL  L+FG+VL+Q+ E   +S S+ ++  N+ +GF   + A   SGF
Sbjct: 171 RTQW--------ISLLTLVFGVVLVQLAEGHEQSSSKNAEGQNRFVGFTAALTACGLSGF 222

Query: 64  TSVYLERIYKADGDDTLLIKNLQLSLLSIPISMINVLLQDSDTVSQHGLFFGYDGLVLTD 123
             VY E+I K   D T+ ++N+QL+L SIP+ +I+    D   +S+ G FFG+D  V   
Sbjct: 223 AGVYFEKILKGS-DVTVWMRNVQLALCSIPLGLISCYAYDGRAISEKGFFFGHDPFVNYL 281

Query: 124 VLFNALGGLIISLVLKHHDNITKIFSTSVSIVVTFV 159
           VL  A GGLI+++V+K+ DNI K F+TS++IV++ V
Sbjct: 282 VLLQAGGGLIVAVVVKYADNILKGFATSLAIVISCV 317

Source: Dendroctonus ponderosae

Species: Dendroctonus ponderosae

Genus: Dendroctonus

Family: Curculionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|268569380|ref|XP_002648242.1| C. briggsae CBR-SRF-3 protein [Caenorhabditis briggsae]

 Score =  113 bits (282), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 56/155 (36%), Positives = 98/155 (63%), Gaps = 12/155 (7%)

Query: 3   SNTEWGSKSLKKVFSLGVLLFGIVLIQIDESASESISRKSDNGNQLIGFGQVILASVSSG 62
           + T+W        F+L VL  G+ L+Q+  + S+ I+ +S      IGF  V++A   SG
Sbjct: 169 NRTQW--------FALAVLFAGVSLVQLQGTKSKEITGESP----FIGFVAVVVACCLSG 216

Query: 63  FTSVYLERIYKADGDDTLLIKNLQLSLLSIPISMINVLLQDSDTVSQHGLFFGYDGLVLT 122
           F  +Y E+I K     +L ++N+Q+++ +IP S I + +QD+ TV+++GL +G+D +V  
Sbjct: 217 FAGIYFEKILKGSAPVSLWMRNVQMAVFAIPSSFIAIYMQDAKTVNEYGLLYGFDSIVWL 276

Query: 123 DVLFNALGGLIISLVLKHHDNITKIFSTSVSIVVT 157
            VL+  +GGL +++ +K+ DNI K F+TSV+IV++
Sbjct: 277 TVLWYGIGGLSVAVCIKYADNIAKNFATSVAIVLS 311

Source: Caenorhabditis briggsae

Species: Caenorhabditis briggsae

Genus: Caenorhabditis

Family: Rhabditidae

Order: Rhabditida

Class: Chromadorea

Phylum: Nematoda

Superkingdom: Eukaryota

>gi|308491863|ref|XP_003108122.1| hypothetical protein CRE_10322 [Caenorhabditis remanei] gi|308248970|gb|EFO92922.1| hypothetical protein CRE_10322 [Caenorhabditis remanei]

 Score =  113 bits (282), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 56/155 (36%), Positives = 98/155 (63%), Gaps = 12/155 (7%)

Query: 3   SNTEWGSKSLKKVFSLGVLLFGIVLIQIDESASESISRKSDNGNQLIGFGQVILASVSSG 62
           + T+W        F+L VL  G+ L+Q+  + S+ IS +S      IGF  V++A   SG
Sbjct: 169 NRTQW--------FALAVLFAGVSLVQLQGTKSKEISGESP----FIGFVAVVVACCLSG 216

Query: 63  FTSVYLERIYKADGDDTLLIKNLQLSLLSIPISMINVLLQDSDTVSQHGLFFGYDGLVLT 122
           F  +Y E+I K     +L ++N+Q+++ +IP S + + +QD+ TV+++GL +G+D +V  
Sbjct: 217 FAGIYFEKILKGSAPVSLWMRNVQMAVFAIPSSFLAIYMQDAKTVNEYGLLYGFDSIVWL 276

Query: 123 DVLFNALGGLIISLVLKHHDNITKIFSTSVSIVVT 157
            VL+  +GGL +++ +K+ DNI K F+TSV+IV++
Sbjct: 277 TVLWYGIGGLSVAVCIKYADNIAKNFATSVAIVLS 311

Source: Caenorhabditis remanei

Species: Caenorhabditis remanei

Genus: Caenorhabditis

Family: Rhabditidae

Order: Rhabditida

Class: Chromadorea

Phylum: Nematoda

Superkingdom: Eukaryota

>gi|308452129|ref|XP_003088925.1| CRE-SRF-3 protein [Caenorhabditis remanei] gi|308244301|gb|EFO88253.1| CRE-SRF-3 protein [Caenorhabditis remanei]

 Score =  112 bits (279), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 55/155 (35%), Positives = 98/155 (63%), Gaps = 12/155 (7%)

Query: 3   SNTEWGSKSLKKVFSLGVLLFGIVLIQIDESASESISRKSDNGNQLIGFGQVILASVSSG 62
           + T+W        F+L VL  G+ L+Q+  + S+ I+ +S      IGF  V++A   SG
Sbjct: 130 NRTQW--------FALAVLFAGVSLVQLQGTKSKEIAGESP----FIGFVAVVVACCLSG 177

Query: 63  FTSVYLERIYKADGDDTLLIKNLQLSLLSIPISMINVLLQDSDTVSQHGLFFGYDGLVLT 122
           F  +Y E+I K     +L ++N+Q+++ +IP S + + +QD+ TV+++GL +G+D +V  
Sbjct: 178 FAGIYFEKILKGSAPVSLWMRNVQMAVFAIPSSFLAIYMQDAKTVNEYGLLYGFDSIVWL 237

Query: 123 DVLFNALGGLIISLVLKHHDNITKIFSTSVSIVVT 157
            VL+  +GGL +++ +K+ DNI K F+TSV+IV++
Sbjct: 238 TVLWYGIGGLSVAVCIKYADNIAKNFATSVAIVLS 272

Source: Caenorhabditis remanei

Species: Caenorhabditis remanei

Genus: Caenorhabditis

Family: Rhabditidae

Order: Rhabditida

Class: Chromadorea

Phylum: Nematoda

Superkingdom: Eukaryota

>gi|380013404|ref|XP_003690750.1| PREDICTED: UDP-galactose translocator-like [Apis florea]

 Score =  112 bits (279), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 59/156 (37%), Positives = 98/156 (62%), Gaps = 10/156 (6%)

Query: 4   NTEWGSKSLKKVFSLGVLLFGIVLIQIDESASESISRKSDNGNQLIGFGQVILASVSSGF 63
           NT+WG+        L +L+ G+VL+Q+ +S+  S+    +  N L+GF   + A   SGF
Sbjct: 141 NTQWGA--------LILLVIGVVLVQLAQSSDTSLPSGIEQ-NHLLGFSAALSACFLSGF 191

Query: 64  TSVYLERIYKADGDDTLLIKNLQLSLLSIPISMINVLLQDSDTVSQHGLFFGYDGLVLTD 123
             +Y E+I K D D ++ I+N+QLSLLS+P  +I   + D + + + G FFGYD  +   
Sbjct: 192 AGIYFEKILK-DSDISVWIRNIQLSLLSLPFGLITCFVNDGEMLQKQGFFFGYDLFICYL 250

Query: 124 VLFNALGGLIISLVLKHHDNITKIFSTSVSIVVTFV 159
           ++  A GGLI+++V+K+ DNI K F+TS++I+++ V
Sbjct: 251 IILQAGGGLIVAMVVKYADNILKGFATSLAIIISCV 286

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|341881221|gb|EGT37156.1| CBN-SRF-3 protein [Caenorhabditis brenneri]

 Score =  111 bits (278), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 55/155 (35%), Positives = 98/155 (63%), Gaps = 12/155 (7%)

Query: 3   SNTEWGSKSLKKVFSLGVLLFGIVLIQIDESASESISRKSDNGNQLIGFGQVILASVSSG 62
           + T+W        F+L VL  G+ L+Q+  + ++ I+ +S      IGF  V++A   SG
Sbjct: 169 NRTQW--------FALAVLFTGVSLVQLQGTKAKEIAGESP----FIGFVAVVVACCLSG 216

Query: 63  FTSVYLERIYKADGDDTLLIKNLQLSLLSIPISMINVLLQDSDTVSQHGLFFGYDGLVLT 122
           F  +Y E+I K     +L ++N+Q+++ +IP S + + +QDS TV+++GL +G+D +V  
Sbjct: 217 FAGIYFEKILKGSAPVSLWMRNVQMAVFAIPSSFLAIYMQDSKTVNEYGLLYGFDSIVWL 276

Query: 123 DVLFNALGGLIISLVLKHHDNITKIFSTSVSIVVT 157
            VL+  +GGL +++ +K+ DNI K F+TSV+IV++
Sbjct: 277 TVLWYGIGGLSVAVCIKYADNIAKNFATSVAIVLS 311

Source: Caenorhabditis brenneri

Species: Caenorhabditis brenneri

Genus: Caenorhabditis

Family: Rhabditidae

Order: Rhabditida

Class: Chromadorea

Phylum: Nematoda

Superkingdom: Eukaryota

>gi|66533109|ref|XP_624386.1| PREDICTED: UDP-galactose translocator [Apis mellifera]

 Score =  110 bits (276), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 57/156 (36%), Positives = 98/156 (62%), Gaps = 10/156 (6%)

Query: 4   NTEWGSKSLKKVFSLGVLLFGIVLIQIDESASESISRKSDNGNQLIGFGQVILASVSSGF 63
           NT+WG+        L +L+ G+VL+Q+ +S+  ++    +  N L+GF   + A   SGF
Sbjct: 141 NTQWGA--------LILLVIGVVLVQLAQSSDTTLPSGREQ-NHLLGFSAALSACFLSGF 191

Query: 64  TSVYLERIYKADGDDTLLIKNLQLSLLSIPISMINVLLQDSDTVSQHGLFFGYDGLVLTD 123
             +Y E+I K D D ++ ++N+QLSLLS+P  +I   + D + + + G FFGYD  +   
Sbjct: 192 AGIYFEKILK-DSDISVWMRNIQLSLLSLPFGLITCFVNDGEMLQKQGFFFGYDLFICYL 250

Query: 124 VLFNALGGLIISLVLKHHDNITKIFSTSVSIVVTFV 159
           ++  A GGLI+++V+K+ DNI K F+TS++I+++ V
Sbjct: 251 IVLQAGGGLIVAMVVKYADNILKGFATSLAIIISCV 286

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|256072017|ref|XP_002572334.1| sugar transporter [Schistosoma mansoni] gi|350645985|emb|CCD59262.1| sugar transporter, putative [Schistosoma mansoni]

 Score =  110 bits (276), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 60/157 (38%), Positives = 98/157 (62%), Gaps = 6/157 (3%)

Query: 9   SKSLKKV--FSLGVLLFGIVLIQIDE---SASESISRKSDNGNQLIGFGQVILASVSSGF 63
           SK L ++   SLGVL  G+VL Q+ +   S++E     ++N N L+G   V+LA   SGF
Sbjct: 143 SKHLSRIQWCSLGVLFTGVVLTQLSDVVDSSTEKTKNVAENSNLLVGLSSVVLACSCSGF 202

Query: 64  TSVYLERIYKADGDDTLLIKNLQLSLLSIPISMINVLLQDSDTVSQHGLFFGYDGLVLTD 123
             V+ E++ K     ++ I+N+QL+   +   ++ V L+D   V++ G FFGYD +V   
Sbjct: 203 AGVFFEKLLKGS-HKSVAIRNIQLAFYGVTAGILTVYLKDGKEVARKGFFFGYDSVVWAA 261

Query: 124 VLFNALGGLIISLVLKHHDNITKIFSTSVSIVVTFVL 160
           +L  +LGGL+I+  +++ DNI K F+TS++IV+TF+L
Sbjct: 262 ILIQSLGGLLIAATIRYADNIRKGFATSMAIVLTFIL 298

Source: Schistosoma mansoni

Species: Schistosoma mansoni

Genus: Schistosoma

Family: Schistosomatidae

Order: Strigeidida

Class: Trematoda

Phylum: Platyhelminthes

Superkingdom: Eukaryota

>gi|324513367|gb|ADY45496.1| UDP-galactose/UDP-N-acetylglucosamine transporter srf-3 [Ascaris suum]

 Score =  108 bits (271), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 54/156 (34%), Positives = 98/156 (62%), Gaps = 12/156 (7%)

Query: 3   SNTEWGSKSLKKVFSLGVLLFGIVLIQIDE-SASESISRKSDNGNQLIGFGQVILASVSS 61
           S T+W        F+L  L  G+ ++Q+ + SA+ES   +      LIGF  V++AS+ S
Sbjct: 190 STTQW--------FALATLFVGVSIVQLQQTSATESTFTQQ---RPLIGFSAVLVASLLS 238

Query: 62  GFTSVYLERIYKADGDDTLLIKNLQLSLLSIPISMINVLLQDSDTVSQHGLFFGYDGLVL 121
           GF  +Y E+I K     ++ ++N+Q+++ +IP S++  L+QD   +S+ G+ +G+D +V 
Sbjct: 239 GFAGIYFEKILKGSAPVSVWMRNVQMAIFAIPSSLLASLVQDWRIISKEGMLYGFDSVVW 298

Query: 122 TDVLFNALGGLIISLVLKHHDNITKIFSTSVSIVVT 157
           T V +  +GGL +++ +K+ DNI K F+TSV+I+++
Sbjct: 299 TTVFWYCIGGLSVAVCIKYADNIAKNFATSVAIIIS 334

Source: Ascaris suum

Species: Ascaris suum

Genus: Ascaris

Family: Ascarididae

Order: Ascaridida

Class: Chromadorea

Phylum: Nematoda

Superkingdom: Eukaryota

>gi|321463852|gb|EFX74865.1| hypothetical protein DAPPUDRAFT_214678 [Daphnia pulex]

 Score =  108 bits (270), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 94/147 (63%), Gaps = 4/147 (2%)

Query: 17  SLGVLLFGIVLIQIDESASESISRKSDNG---NQLIGFGQVILASVSSGFTSVYLERIYK 73
           +L VLL G+ ++Q+ ++  E   + + +G   ++ +GFG  + A V SGF  +Y E+I K
Sbjct: 145 ALVVLLVGVAMVQLAQTEPEKTDKTASSGPEQHRWVGFGAALAACVLSGFAGIYFEKILK 204

Query: 74  ADGDDTLLIKNLQLSLLSIPISMINVLLQDSDTVSQHGLFFGYDGLVLTDVLFNALGGLI 133
              + ++ ++N+QLS LS+P  +   L+ D  T++  G FFGYD  +   V+  A GGL+
Sbjct: 205 GS-NVSVWMRNIQLSFLSLPFGLFTCLIYDWSTINSQGFFFGYDSFIWYLVVLQATGGLL 263

Query: 134 ISLVLKHHDNITKIFSTSVSIVVTFVL 160
           +++V+K+ DNI K F+TS++I+++ V+
Sbjct: 264 VAMVVKYADNILKGFATSLAIILSCVV 290

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	162
UNIPROTKB|G5EFB7	244	srf-3 "Protein SRF-3, isoform	0.802	0.532	0.308	1.1e-14
UNIPROTKB|G5EFD3	328	srf-3 "Protein SRF-3, isoform	0.802	0.396	0.308	2.5e-14
WB|WBGene00005153	368	srf-3 [Caenorhabditis elegans	0.802	0.353	0.308	3.9e-14
UNIPROTKB|Q93890	368	srf-3 "UDP-galactose/UDP-N-ace	0.802	0.353	0.308	3.9e-14
WB|WBGene00022721	355	ugtp-1 [Caenorhabditis elegans	0.833	0.380	0.326	9.5e-14
RGD|1308615	326	Slc35a3 "solute carrier family	0.777	0.386	0.322	2.6e-13
UNIPROTKB|O77592	326	SLC35A3 "UDP-N-acetylglucosami	0.777	0.386	0.322	3.3e-13
UNIPROTKB|Q6YC49	326	SLC35A3 "UDP-N-acetylglucosami	0.777	0.386	0.322	5.6e-13
UNIPROTKB|Q0GA84	325	SLC35A3 "Solute carrier family	0.827	0.412	0.321	7.2e-13
MGI|MGI:1917648	326	Slc35a3 "solute carrier family	0.777	0.386	0.322	9.4e-13

UNIPROTKB|G5EFB7 srf-3 "Protein SRF-3, isoform c" [Caenorhabditis elegans (taxid:6239)]

 Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
 Identities = 42/136 (30%), Positives = 73/136 (53%)

Query:    10 KSLKKV--FSLGVLLFGIVLIQIDESASESISRKSDNGNQLIGFGQVILASVSSGFTSVY 67
             +SL +   F+L VL  G+ L+Q+  + ++  S +S      +GF  V++A   SGF  +Y
Sbjct:    43 RSLNRTQWFALAVLFVGVSLVQLQGTKAKESSGESP----FVGFVAVVVACCLSGFAGIY 98

Query:    68 LERIYKADGDDTXXXXXXXXXXXXXPISMINVLLQDSDTVSQHGLFFGYDGLVLTDVLFN 127
              E+I K     +             P S   + +QDS TV+++GL +G+D +V   VL+ 
Sbjct:    99 FEKILKGSAPVSLWMRNVQMAVFSIPASFSAIYMQDSKTVNEYGLLYGFDSIVWLTVLWY 158

Query:   128 ALGGLIISLVLKHHDN 143
              +GGL +++ +K+ DN
Sbjct:   159 GVGGLSVAVCIKYADN 174

GO:0072334 "UDP-galactose transmembrane transport" evidence=IDA

UNIPROTKB|G5EFD3 srf-3 "Protein SRF-3, isoform b" [Caenorhabditis elegans (taxid:6239)]

 Score = 187 (70.9 bits), Expect = 2.5e-14, P = 2.5e-14
 Identities = 42/136 (30%), Positives = 73/136 (53%)

Query:    10 KSLKKV--FSLGVLLFGIVLIQIDESASESISRKSDNGNQLIGFGQVILASVSSGFTSVY 67
             +SL +   F+L VL  G+ L+Q+  + ++  S +S      +GF  V++A   SGF  +Y
Sbjct:   127 RSLNRTQWFALAVLFVGVSLVQLQGTKAKESSGESP----FVGFVAVVVACCLSGFAGIY 182

Query:    68 LERIYKADGDDTXXXXXXXXXXXXXPISMINVLLQDSDTVSQHGLFFGYDGLVLTDVLFN 127
              E+I K     +             P S   + +QDS TV+++GL +G+D +V   VL+ 
Sbjct:   183 FEKILKGSAPVSLWMRNVQMAVFSIPASFSAIYMQDSKTVNEYGLLYGFDSIVWLTVLWY 242

Query:   128 ALGGLIISLVLKHHDN 143
              +GGL +++ +K+ DN
Sbjct:   243 GVGGLSVAVCIKYADN 258

GO:0072334 "UDP-galactose transmembrane transport" evidence=IDA

WB|WBGene00005153 srf-3 [Caenorhabditis elegans (taxid:6239)]

 Score = 187 (70.9 bits), Expect = 3.9e-14, P = 3.9e-14
 Identities = 42/136 (30%), Positives = 73/136 (53%)

Query:    10 KSLKKV--FSLGVLLFGIVLIQIDESASESISRKSDNGNQLIGFGQVILASVSSGFTSVY 67
             +SL +   F+L VL  G+ L+Q+  + ++  S +S      +GF  V++A   SGF  +Y
Sbjct:   167 RSLNRTQWFALAVLFVGVSLVQLQGTKAKESSGESP----FVGFVAVVVACCLSGFAGIY 222

Query:    68 LERIYKADGDDTXXXXXXXXXXXXXPISMINVLLQDSDTVSQHGLFFGYDGLVLTDVLFN 127
              E+I K     +             P S   + +QDS TV+++GL +G+D +V   VL+ 
Sbjct:   223 FEKILKGSAPVSLWMRNVQMAVFSIPASFSAIYMQDSKTVNEYGLLYGFDSIVWLTVLWY 282

Query:   128 ALGGLIISLVLKHHDN 143
              +GGL +++ +K+ DN
Sbjct:   283 GVGGLSVAVCIKYADN 298

GO:0016020 "membrane" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=IEA

GO:0015780 "nucleotide-sugar transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=IDA

GO:0005459 "UDP-galactose transmembrane transporter activity" evidence=IDA

GO:0005462 "UDP-N-acetylglucosamine transmembrane transporter activity" evidence=IDA

GO:0015785 "UDP-galactose transport" evidence=IDA

GO:0015788 "UDP-N-acetylglucosamine transport" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IC

UNIPROTKB|Q93890 srf-3 "UDP-galactose/UDP-N-acetylglucosamine transporter srf-3" [Caenorhabditis elegans (taxid:6239)]

 Score = 187 (70.9 bits), Expect = 3.9e-14, P = 3.9e-14
 Identities = 42/136 (30%), Positives = 73/136 (53%)

Query:    10 KSLKKV--FSLGVLLFGIVLIQIDESASESISRKSDNGNQLIGFGQVILASVSSGFTSVY 67
             +SL +   F+L VL  G+ L+Q+  + ++  S +S      +GF  V++A   SGF  +Y
Sbjct:   167 RSLNRTQWFALAVLFVGVSLVQLQGTKAKESSGESP----FVGFVAVVVACCLSGFAGIY 222

Query:    68 LERIYKADGDDTXXXXXXXXXXXXXPISMINVLLQDSDTVSQHGLFFGYDGLVLTDVLFN 127
              E+I K     +             P S   + +QDS TV+++GL +G+D +V   VL+ 
Sbjct:   223 FEKILKGSAPVSLWMRNVQMAVFSIPASFSAIYMQDSKTVNEYGLLYGFDSIVWLTVLWY 282

Query:   128 ALGGLIISLVLKHHDN 143
              +GGL +++ +K+ DN
Sbjct:   283 GVGGLSVAVCIKYADN 298

GO:0072334 "UDP-galactose transmembrane transport" evidence=IDA

GO:0030173 "integral to Golgi membrane" evidence=IDA

GO:0015788 "UDP-N-acetylglucosamine transport" evidence=IDA

GO:0005462 "UDP-N-acetylglucosamine transmembrane transporter activity" evidence=IDA

GO:0015785 "UDP-galactose transport" evidence=IDA

GO:0005459 "UDP-galactose transmembrane transporter activity" evidence=IDA

WB|WBGene00022721 ugtp-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 183 (69.5 bits), Expect = 9.5e-14, P = 9.5e-14
 Identities = 45/138 (32%), Positives = 72/138 (52%)

Query:     8 GSK-SLKKVFSLGVLLFGIVLIQIDE-SASESISRKSDNGNQLIGFGQVILASVSSGFTS 65
             G K S ++  ++ +L+FG+  +Q++  SASE+ +++    N ++G   V+   V++GF  
Sbjct:   169 GRKFSTRRWMAITLLMFGVAFVQMNNVSASEANTKRETAENYIVGLSAVLATCVTAGFAG 228

Query:    66 VYLERIYKADGDDTXXXXXXXXXXXXXPISMINVLLQDSDTVSQHGLFFGYDGLVLTDVL 125
             VY E++ K DG  T              IS     L D   +S  G FFGY   V   V+
Sbjct:   229 VYFEKMLK-DGGSTPFWIRNMQMYSCGVISASIACLTDFSRISDKGFFFGYTDKVWAVVI 287

Query:   126 FNALGGLIISLVLKHHDN 143
                +GGL ISLV+++ DN
Sbjct:   288 LLGVGGLYISLVMRYLDN 305

GO:0016020 "membrane" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=IEA

GO:0015780 "nucleotide-sugar transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0060473 "cortical granule" evidence=IDA

RGD|1308615 Slc35a3 "solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3" [Rattus norvegicus (taxid:10116)]

 Score = 178 (67.7 bits), Expect = 2.6e-13, P = 2.6e-13
 Identities = 41/127 (32%), Positives = 66/127 (51%)

Query:    17 SLGVLLFGIVLIQIDESASESISRKSDNGNQLIGFGQVILASVSSGFTSVYLERIYKADG 76
             SL +L+ G+  +Q    + E  S+    G+Q +G   V++A  SSGF  VY E+I K + 
Sbjct:   143 SLVILMAGVAFVQWPSDSQELNSKDLSTGSQFVGLMAVLIACFSSGFAGVYFEKILK-ET 201

Query:    77 DDTXXXXXXXXXXXXXPISMINVLLQDSDTVSQHGLFFGYDGLVLTDVLFNALGGLIISL 136
               +                ++ V + D + VS++G F GY+ L    V+  ALGGL+I+ 
Sbjct:   202 KQSVWIRNIQLGFFGSIFGLMGVYVYDGELVSKNGFFQGYNQLTWIVVVLQALGGLVIAA 261

Query:   137 VLKHHDN 143
             V+K+ DN
Sbjct:   262 VIKYADN 268

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=IEA

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0015780 "nucleotide-sugar transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|O77592 SLC35A3 "UDP-N-acetylglucosamine transporter" [Canis lupus familiaris (taxid:9615)]

 Score = 177 (67.4 bits), Expect = 3.3e-13, P = 3.3e-13
 Identities = 41/127 (32%), Positives = 66/127 (51%)

Query:    17 SLGVLLFGIVLIQIDESASESISRKSDNGNQLIGFGQVILASVSSGFTSVYLERIYKADG 76
             SL +L+ G+  +Q    + E  S++   G+Q +G   V+ A  SSGF  VY E+I K + 
Sbjct:   143 SLVILMTGVAFVQWPSDSQELDSKELSAGSQFVGLMAVLTACFSSGFAGVYFEKILK-ET 201

Query:    77 DDTXXXXXXXXXXXXXPISMINVLLQDSDTVSQHGLFFGYDGLVLTDVLFNALGGLIISL 136
               +                ++ V + D + VS++G F GY+ L    V+  ALGGL+I+ 
Sbjct:   202 KQSVWIRNIQLGFFGSIFGLMGVYIYDGELVSKNGFFQGYNRLTWIVVILQALGGLVIAA 261

Query:   137 VLKHHDN 143
             V+K+ DN
Sbjct:   262 VIKYADN 268

GO:0000139 "Golgi membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0015780 "nucleotide-sugar transport" evidence=IEA

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=IEA

UNIPROTKB|Q6YC49 SLC35A3 "UDP-N-acetylglucosamine transporter" [Bos taurus (taxid:9913)]

 Score = 175 (66.7 bits), Expect = 5.6e-13, P = 5.6e-13
 Identities = 41/127 (32%), Positives = 66/127 (51%)

Query:    17 SLGVLLFGIVLIQIDESASESISRKSDNGNQLIGFGQVILASVSSGFTSVYLERIYKADG 76
             SL +L+ G+  +Q    + E  S++   G+Q +G   V+ A  SSGF  VY E+I K + 
Sbjct:   143 SLVILMTGVAFVQWPSDSQELNSKELSAGSQFVGLMAVLTACFSSGFAGVYFEKILK-ET 201

Query:    77 DDTXXXXXXXXXXXXXPISMINVLLQDSDTVSQHGLFFGYDGLVLTDVLFNALGGLIISL 136
               +                ++ V + D + VS++G F GY+ L    V+  ALGGL+I+ 
Sbjct:   202 KQSVWIRNIQLGFFGSIFGLMGVYVYDGELVSKNGFFQGYNRLTWIVVVLQALGGLVIAA 261

Query:   137 VLKHHDN 143
             V+K+ DN
Sbjct:   262 VIKYADN 268

GO:0000139 "Golgi membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0015780 "nucleotide-sugar transport" evidence=IEA

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=IEA

UNIPROTKB|Q0GA84 SLC35A3 "Solute carrier family 35 member A3" [Sus scrofa (taxid:9823)]

 Score = 174 (66.3 bits), Expect = 7.2e-13, P = 7.2e-13
 Identities = 44/137 (32%), Positives = 71/137 (51%)

Query:     8 GSK-SLKKVFSLGVLLFGIVLIQIDESASESISRKSDNGNQLIGFGQVILASVSSGFTSV 66
             G K  L +  SL +L+ G+  +Q   S S+ + ++   G+Q +G   V+ A  SSGF  V
Sbjct:   133 GKKLGLYQWLSLVILMTGVAFVQWP-SDSQELEKELSAGSQFVGLMAVLTACFSSGFAGV 191

Query:    67 YLERIYKADGDDTXXXXXXXXXXXXXPISMINVLLQDSDTVSQHGLFFGYDGLVLTDVLF 126
             Y E+I K +   +                ++ V + D + VS++G F GY+ L    V+ 
Sbjct:   192 YFEKILK-ETKQSVWIRNIQLGFFGSIFGLMGVYIYDGELVSKNGFFQGYNRLTWIVVVL 250

Query:   127 NALGGLIISLVLKHHDN 143
              ALGGL+I+ V+K+ DN
Sbjct:   251 QALGGLVIAAVIKYADN 267

GO:0016021 "integral to membrane" evidence=IEA

GO:0015780 "nucleotide-sugar transport" evidence=IEA

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

MGI|MGI:1917648 Slc35a3 "solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member 3" [Mus musculus (taxid:10090)]

 Score = 173 (66.0 bits), Expect = 9.4e-13, P = 9.4e-13
 Identities = 41/127 (32%), Positives = 64/127 (50%)

Query:    17 SLGVLLFGIVLIQIDESASESISRKSDNGNQLIGFGQVILASVSSGFTSVYLERIYKADG 76
             SL +L+ G+  +Q    + E  S+    G+Q +G   V+ A  SSGF  VY E+I K + 
Sbjct:   143 SLVILMAGVAFVQWPSDSQELNSKDLSTGSQFVGLMAVLTACFSSGFAGVYFEKILK-ET 201

Query:    77 DDTXXXXXXXXXXXXXPISMINVLLQDSDTVSQHGLFFGYDGLVLTDVLFNALGGLIISL 136
               +                ++ V + D + VS++G F GY+ L    V   ALGGL+I+ 
Sbjct:   202 KQSVWIRNIQLGFFGSIFGLMGVYVYDGELVSKNGFFQGYNQLTWIVVALQALGGLVIAA 261

Query:   137 VLKHHDN 143
             V+K+ DN
Sbjct:   262 VIKYADN 268

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=IEA

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0015780 "nucleotide-sugar transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	162
pfam04142	238	pfam04142, Nuc_sug_transp, Nucleotide-sugar transp	4e-34
TIGR00803	222	TIGR00803, nst, UDP-galactose transporter	2e-14

>gnl|CDD|217924 pfam04142, Nuc_sug_transp, Nucleotide-sugar transporter

 Score =  119 bits (301), Expect = 4e-34
 Identities = 52/145 (35%), Positives = 89/145 (61%), Gaps = 1/145 (0%)

Query: 16  FSLGVLLFGIVLIQIDESASESISRKSDNGNQLIGFGQVILASVSSGFTSVYLERIYKAD 75
            SL +L  G+ ++Q+D+ +SE+ S++    N  +G   V+ A  +SGF  VY E+I K  
Sbjct: 75  ASLLLLFLGVAIVQLDQKSSETNSKRGAEQNPGLGLSAVLAACFTSGFAGVYFEKILK-G 133

Query: 76  GDDTLLIKNLQLSLLSIPISMINVLLQDSDTVSQHGLFFGYDGLVLTDVLFNALGGLIIS 135
            + ++ I+N+QL    I  +++   L D   +S+ G FFGY   V   VL  A+GGL+++
Sbjct: 134 SNTSIWIRNIQLYFFGIFFALLTCWLYDGSAISEKGFFFGYTAFVWAVVLLQAVGGLVVA 193

Query: 136 LVLKHHDNITKIFSTSVSIVVTFVL 160
           +V+K+ DNI K F+TS++I+++ V 
Sbjct: 194 VVVKYADNILKGFATSLAIILSTVA 218

This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. Human SLC35A1 transports CMP-sialic acid, SLC35A2 transports UDP-galactose and SLC35A3 transports UDP-GlcNAc. Length = 238

>gnl|CDD|129885 TIGR00803, nst, UDP-galactose transporter

 Score = 67.8 bits (166), Expect = 2e-14
 Identities = 53/153 (34%), Positives = 84/153 (54%), Gaps = 5/153 (3%)

Query: 8   GSKSLKKVFSLGVLLFGIVLIQIDESASESISRKSDNGNQLIGFGQVILASVSSGFTSVY 67
            S    + FSL +L  G+ ++Q+ +S+++++      GN ++G   V+ A +SSGF  VY
Sbjct: 48  ASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMF----GNPVVGLSAVLSALLSSGFAGVY 103

Query: 68  LERIYKADGDDTLLIKNLQLSLLSIPISMINVLLQDSDTVSQHGLFFGYDGLVLTDVLFN 127
            E+I K DGD     +NLQL L  +  +   +L  D   +S  G F GY   V    L N
Sbjct: 104 FEKILK-DGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVWIVGLLN 162

Query: 128 ALGGLIISLVLKHHDNITKIFSTSVSIVVTFVL 160
             GGL I  V+++ DN TK F T++SI+++ + 
Sbjct: 163 VGGGLCIGGVVRYADNTTKSFVTALSIILSTLA 195

The 10-12 TMS Nucleotide Sugar Transporters (TC 2.A.7.10)Nucleotide-sugar transporters (NSTs) are found in the Golgi apparatus and the endoplasmic reticulum of eukaryotic cells. Members of the family have been sequenced from yeast, protozoans and animals. Animals such as C. elegans possess many of these transporters. Humans have at least two closely related isoforms of the UDP-galactose:UMP exchange transporter.NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids. Length = 222

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	162
KOG2234|consensus	345		100.0
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	100.0
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	99.95
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.08
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	98.56
KOG1583|consensus	330		98.08
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	97.95
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	97.94
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	97.79
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	97.74
KOG3912|consensus	372		97.51
PRK11272	292	putative DMT superfamily transporter inner membran	97.26
KOG1581|consensus	327		97.18
PRK11689	295	aromatic amino acid exporter; Provisional	97.09
COG0697	292	RhaT Permeases of the drug/metabolite transporter	96.98
PLN00411	358	nodulin MtN21 family protein; Provisional	96.87
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	96.21
PRK15430	296	putative chloramphenical resistance permease RarD;	95.78
KOG1582|consensus	367		95.22
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	95.14
KOG1580|consensus	337		94.51
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	93.91
KOG1443|consensus	349		92.85
KOG1441|consensus	316		92.41
PRK10532	293	threonine and homoserine efflux system; Provisiona	90.66
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	89.56
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	88.9
KOG1444|consensus	314		86.66
KOG2766|consensus	336		85.33
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	82.95
KOG1442|consensus	347		82.33

>KOG2234|consensus

Probab=100.00  E-value=1.5e-50  Score=338.86  Aligned_cols=156  Identities=37%  Similarity=0.597  Sum_probs=146.9

Q ss_pred             ccCCccchhHHHHHHHHHhhhhheeccCCCCccccccCCCCchhhHHHHHHHHHHhhhhHHHHHHhhhccCCCCchHHHH
Q psy10759          5 TEWGSKSLKKVFSLGVLLFGIVLIQIDESASESISRKSDNGNQLIGFGQVILASVSSGFTSVYLERIYKADGDDTLLIKN   84 (162)
Q Consensus         5 ~L~r~lS~~QW~aL~lL~~Gv~l~q~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~Sg~AgVy~E~~lK~~~~~s~~~~N   84 (162)
                      +|+||+|++||.|+++|+.|+.++|.+..++.++..+.+.++++.|+.+++.+|++||||||||||++| +++.|+|+||
T Consensus       139 ~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK-~s~~s~wi~N  217 (345)
T KOG2234|consen  139 ILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILK-GSNVSLWIRN  217 (345)
T ss_pred             HHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHh-cCCchHHHHH
Confidence            689999999999999999999999976555443344667889999999999999999999999999999 8889999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCccccccCccccCchhHHHHHHHHhhhhHHHhhHHhhcchhHHHHHHHHHHHhhhhhc
Q psy10759         85 LQLSLLSIPISMINVLLQDSDTVSQHGLFFGYDGLVLTDVLFNALGGLIISLVLKHHDNITKIFSTSVSIVVTFVLK  161 (162)
Q Consensus        85 ~qL~~~gi~~~~~~~~~~dg~~~~~~gff~G~~~~~~~vi~~~A~gGl~va~v~KyadnI~K~fa~s~sivlt~~~s  161 (162)
                      +|||++|++++++.++..|++++...|||+|||+++|++|++||+|||++|+|+||||||+|+|++++||++|+++|
T Consensus       218 iqL~~~g~~f~~l~~~~~d~~~i~~~gff~G~s~~vw~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S  294 (345)
T KOG2234|consen  218 IQLYFFGILFNLLTILLQDGEAINEYGFFYGYSSIVWLVVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVAS  294 (345)
T ss_pred             HHHHHHHHHHHHHHHhhccccccccCCccccccHHHHHHHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999998899999999999999999999999999999999999999999999999999987

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=100.00  E-value=2.4e-47  Score=310.28  Aligned_cols=157  Identities=38%  Similarity=0.575  Sum_probs=144.6

Q ss_pred             CccCCccchhHHHHHHHHHhhhhheeccCCCCcccc------ccCCCCchhhHHHHHHHHHHhhhhHHHHHHhhhccCCC
Q psy10759          4 NTEWGSKSLKKVFSLGVLLFGIVLIQIDESASESIS------RKSDNGNQLIGFGQVILASVSSGFTSVYLERIYKADGD   77 (162)
Q Consensus         4 ~~L~r~lS~~QW~aL~lL~~Gv~l~q~~~~~~~~~~------~~~~~~~~~~G~~~vl~~~~~Sg~AgVy~E~~lK~~~~   77 (162)
                      .+||||+|++||+|+++|++|++++|.++..+++.+      ++.++.++..|+++++++|++||+||||+||++| +++
T Consensus        63 ~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK-~~~  141 (244)
T PF04142_consen   63 LLLKRRLSRRQWLALFLLVAGVVLVQLSSSQSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLK-RSN  141 (244)
T ss_pred             HHHHcccchhhHHHHHHHHHHHheeecCCccccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhc-ccc
Confidence            479999999999999999999999999877653111      1223567899999999999999999999999999 677


Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHhcCCccccccCccccCchhHHHHHHHHhhhhHHHhhHHhhcchhHHHHHHHHHHHhh
Q psy10759         78 DTLLIKNLQLSLLSIPISMINVLLQDSDTVSQHGLFFGYDGLVLTDVLFNALGGLIISLVLKHHDNITKIFSTSVSIVVT  157 (162)
Q Consensus        78 ~s~~~~N~qL~~~gi~~~~~~~~~~dg~~~~~~gff~G~~~~~~~vi~~~A~gGl~va~v~KyadnI~K~fa~s~sivlt  157 (162)
                      .|+|+||+|||++|++++++...+.|++++.+.|||+|||+++|++|++||+|||+|++|+||+|||+|+||+++||++|
T Consensus       142 ~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~g~f~G~~~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t  221 (244)
T PF04142_consen  142 VSLWIQNMQLYLFGILFNLLALLLSDGSAISESGFFHGYSWWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLT  221 (244)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhcccccccccCCchhhcchHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhc
Q psy10759        158 FVLK  161 (162)
Q Consensus       158 ~~~s  161 (162)
                      +++|
T Consensus       222 ~~~s  225 (244)
T PF04142_consen  222 AVLS  225 (244)
T ss_pred             HHHH
Confidence            9886

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>TIGR00803 nst UDP-galactose transporter

Probab=99.95  E-value=1.7e-27  Score=189.61  Aligned_cols=152  Identities=35%  Similarity=0.526  Sum_probs=136.9

Q ss_pred             ccCCccchhHHHHHHHHHhhhhheeccCCCCccccccCCCCchhhHHHHHHHHHHhhhhHHHHHHhhhccCCCCchHHHH
Q psy10759          5 TEWGSKSLKKVFSLGVLLFGIVLIQIDESASESISRKSDNGNQLIGFGQVILASVSSGFTSVYLERIYKADGDDTLLIKN   84 (162)
Q Consensus         5 ~L~r~lS~~QW~aL~lL~~Gv~l~q~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~Sg~AgVy~E~~lK~~~~~s~~~~N   84 (162)
                      .++|++|..||.++.+|..|+.++|.++..+    .+....+...|+.+++.++++|+++++|+|+.+| +++.++|.||
T Consensus        45 ~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~----~~~~~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k-~~~~~~~~~~  119 (222)
T TIGR00803        45 SLVASLGDDQWFSLKLLKLGVAIVQMVQSSA----KTLMFGNPVVGLSAVLSALLSSGFAGVYFEKILK-DGDTMFWSRN  119 (222)
T ss_pred             HHHhHhhHHHHHHHHHHHHhHeeeecCCCCc----cccccccHHHHHHHHHHHHHHHhhhHHHHHHccc-CCCCchHHHH
Confidence            3678999999999999999999999776532    2223347889999999999999999999999999 6778899999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCccccccCccccCchhHHHHHHHHhhhhHHHhhHHhhcchhHHHHHHHHHHHhhhhhc
Q psy10759         85 LQLSLLSIPISMINVLLQDSDTVSQHGLFFGYDGLVLTDVLFNALGGLIISLVLKHHDNITKIFSTSVSIVVTFVLK  161 (162)
Q Consensus        85 ~qL~~~gi~~~~~~~~~~dg~~~~~~gff~G~~~~~~~vi~~~A~gGl~va~v~KyadnI~K~fa~s~sivlt~~~s  161 (162)
                      ++|++++++.+.......|++...+.+||+||+..+|.+++++|+||+++++++||+|+++|+++++++.++|+++|
T Consensus       120 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls  196 (222)
T TIGR00803       120 LQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLAS  196 (222)
T ss_pred             HHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHH
Confidence            99999999988888888888888899999999999999999999999999999999999999999999999999886

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.08  E-value=1.7e-09  Score=89.99  Aligned_cols=156  Identities=22%  Similarity=0.295  Sum_probs=106.0

Q ss_pred             CCCccCCccchhHHHHHHHHHhhhhheeccCCCCccccccCCCCchhhHHHHHHHHHHhhhhHHHHHHhhhccCCCCchH
Q psy10759          2 GSNTEWGSKSLKKVFSLGVLLFGIVLIQIDESASESISRKSDNGNQLIGFGQVILASVSSGFTSVYLERIYKADGDDTLL   81 (162)
Q Consensus         2 g~~~L~r~lS~~QW~aL~lL~~Gv~l~q~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~Sg~AgVy~E~~lK~~~~~s~~   81 (162)
                      |..++|||++++||++.+++++|+++..+++..+++.+ +....+...|+.+++.+.++.|+.++|.||++| +.+.+.|
T Consensus       108 ~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~-~~~~~~~~~G~~ll~~sl~~~a~~~~~qe~~~~-~~~~~~~  185 (303)
T PF08449_consen  108 GVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSS-NSSSFSSALGIILLLLSLLLDAFTGVYQEKLFK-KYGKSPW  185 (303)
T ss_pred             HHHhcCccccHHHHHHHHHHHhhHheeeeccccccccc-ccccccchhHHHHHHHHHHHHHHHHHHHHHHHH-HhCCcHH
Confidence            56789999999999999999999999998776543222 222223345999999999999999999999999 6666776


Q ss_pred             HHHHHHHHHHHHHHHHHHHh-cCCccccccCccccCchhHHHH----HHHHhhhhHHHhhHHhhcchhHHHHHHHHHHHh
Q psy10759         82 IKNLQLSLLSIPISMINVLL-QDSDTVSQHGLFFGYDGLVLTD----VLFNALGGLIISLVLKHHDNITKIFSTSVSIVV  156 (162)
Q Consensus        82 ~~N~qL~~~gi~~~~~~~~~-~dg~~~~~~gff~G~~~~~~~v----i~~~A~gGl~va~v~KyadnI~K~fa~s~sivl  156 (162)
                      ..-....+++.++.++..+. +.++-.....|... +|.++..    .+.+++|=..+...+|+.+...-+..+.+--.+
T Consensus       186 ~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~-~p~~~~~l~~~s~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~  264 (303)
T PF08449_consen  186 ELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISA-HPSVLLYLLLFSLTGALGQFFIFYLIKKFSALTTTIVTTLRKFL  264 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHH
Confidence            66666788998888776555 11221112222222 2333333    355555666677778888877666555544444


Q ss_pred             hhhh
Q psy10759        157 TFVL  160 (162)
Q Consensus       157 t~~~  160 (162)
                      |.++
T Consensus       265 sill  268 (303)
T PF08449_consen  265 SILL  268 (303)
T ss_pred             HHHH
Confidence            4443

; GO: 0055085 transmembrane transport

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=98.56  E-value=1.3e-06  Score=74.33  Aligned_cols=142  Identities=18%  Similarity=0.156  Sum_probs=99.4

Q ss_pred             CCccCCccchhHHHHHHHHHhhhhheeccCCCCccccccCCCCchhhHHHHHHHHHHhhhhHHHHHHhhhccCCCCchHH
Q psy10759          3 SNTEWGSKSLKKVFSLGVLLFGIVLIQIDESASESISRKSDNGNQLIGFGQVILASVSSGFTSVYLERIYKADGDDTLLI   82 (162)
Q Consensus         3 ~~~L~r~lS~~QW~aL~lL~~Gv~l~q~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~Sg~AgVy~E~~lK~~~~~s~~~   82 (162)
                      ..+||+|++..||++.++-+.|+.++-..+..+++  ++....++.+|-+.+++++++-|+..|+.|+..| +.  +...
T Consensus       124 ~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~--~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~-~~--~~~~  198 (334)
T PF06027_consen  124 FIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGS--DSSSGSNPILGDLLALLGAILYAVSNVLEEKLVK-KA--PRVE  198 (334)
T ss_pred             HHHHHhhhhHHHHHHHHHHHhhhhheeeecccccc--cCCCCCccchhHHHHHHHHHHHHHHHHHHHHhcc-cC--CHHH
Confidence            35799999999999999999999998877655421  2234568999999999999999999999999999 33  4555


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCccccccCccccCchhHHHHHHHHhhhh----HHHhhHHhhcchhHHHHHHHHH
Q psy10759         83 KNLQLSLLSIPISMINVLLQDSDTVSQHGLFFGYDGLVLTDVLFNALGG----LIISLVLKHHDNITKIFSTSVS  153 (162)
Q Consensus        83 ~N~qL~~~gi~~~~~~~~~~dg~~~~~~gff~G~~~~~~~vi~~~A~gG----l~va~v~KyadnI~K~fa~s~s  153 (162)
                      -.-++.+||.+++.+....-+.+++.+   ++ |++.++...+..++.=    .++..++|+++...=+.....+
T Consensus       199 ~lg~~Glfg~ii~~iq~~ile~~~i~~---~~-w~~~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTs  269 (334)
T PF06027_consen  199 FLGMLGLFGFIISGIQLAILERSGIES---IH-WTSQVIGLLVGYALCLFLFYSLVPIVLRMSSATFFNLSLLTS  269 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHheehhhhhc---cC-CChhhHHHHHHHHHHHHHHHHHHHHHHHhCccceeehHHHHh
Confidence            668889999988887766555544432   12 4444444333322221    2457788888876544443333

Some of the sequences in this family are annotated as putative membrane proteins.

>KOG1583|consensus

Probab=98.08  E-value=5.5e-06  Score=68.81  Aligned_cols=94  Identities=22%  Similarity=0.259  Sum_probs=72.6

Q ss_pred             CCCccCCccchhHHHHHHHHHhhhhheeccCCCCccc-------c-ccCCCCchhhHHHHHHHHHHhhhhHHHHHHhhhc
Q psy10759          2 GSNTEWGSKSLKKVFSLGVLLFGIVLIQIDESASESI-------S-RKSDNGNQLIGFGQVILASVSSGFTSVYLERIYK   73 (162)
Q Consensus         2 g~~~L~r~lS~~QW~aL~lL~~Gv~l~q~~~~~~~~~-------~-~~~~~~~~~~G~~~vl~~~~~Sg~AgVy~E~~lK   73 (162)
                      |--.+|||+|.+|..|.+++++|+.+..+.+.++...       . ...+.....+|+.+...+-++|+..|+|.|..+|
T Consensus       109 g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~  188 (330)
T KOG1583|consen  109 GWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQ  188 (330)
T ss_pred             HHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3346899999999999999999999998866554211       1 1123345679999999999999999999999999


Q ss_pred             cCCCCchHHHHHHH-HHHHHHHHHH
Q psy10759         74 ADGDDTLLIKNLQL-SLLSIPISMI   97 (162)
Q Consensus        74 ~~~~~s~~~~N~qL-~~~gi~~~~~   97 (162)
                        +...-|-++++. .+.++|+-+.
T Consensus       189 --kyGKh~~EalFytH~LsLP~Flf  211 (330)
T KOG1583|consen  189 --KYGKHWKEALFYTHFLSLPLFLF  211 (330)
T ss_pred             --HhcCChHHHHHHHHHhccchHHH
Confidence              346678888885 6677766543

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=97.95  E-value=0.00026  Score=60.38  Aligned_cols=145  Identities=17%  Similarity=0.231  Sum_probs=89.5

Q ss_pred             CCccCCccchhHHHHHHHHHhhhhheeccCCCCccccccCCCCchhhHHHHHHHHHHhhhhHHHHHHhhhccCCC---Cc
Q psy10759          3 SNTEWGSKSLKKVFSLGVLLFGIVLIQIDESASESISRKSDNGNQLIGFGQVILASVSSGFTSVYLERIYKADGD---DT   79 (162)
Q Consensus         3 ~~~L~r~lS~~QW~aL~lL~~Gv~l~q~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~Sg~AgVy~E~~lK~~~~---~s   79 (162)
                      ..++|+|+|++||.++++.++|+.+.-.++.           .....|++..++++++.++-.++.+|.+++ .+   .+
T Consensus       159 ~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~-----------~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~-~~~~~~~  226 (350)
T PTZ00343        159 ILFLKQFLNLYAYLSLIPIVGGVALASVKEL-----------HFTWLAFWCAMLSNLGSSLRSIFAKKTMKN-KSEIGEN  226 (350)
T ss_pred             HHHhCCCccHHHHHHHHHHHHHHHheecccc-----------hhHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccccccc
Confidence            4578999999999999999999999764221           123679999999999999999999999983 32   13


Q ss_pred             hHHHHHHH--HHHHHHHHHHHHHhcCCccccc-----cCccccCch-hHHHHHHHHhhhhHHHhh----HHhhcchhHHH
Q psy10759         80 LLIKNLQL--SLLSIPISMINVLLQDSDTVSQ-----HGLFFGYDG-LVLTDVLFNALGGLIISL----VLKHHDNITKI  147 (162)
Q Consensus        80 ~~~~N~qL--~~~gi~~~~~~~~~~dg~~~~~-----~gff~G~~~-~~~~vi~~~A~gGl~va~----v~KyadnI~K~  147 (162)
                      ....|+..  ..+|.++.+......++.....     ..-+..+.+ ..+..++...+...+...    .+|+.+.+.-+
T Consensus       227 ~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~s  306 (350)
T PTZ00343        227 LTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHA  306 (350)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHH
Confidence            44455554  4456555554444333321000     011222222 233345555666666553    77777766655


Q ss_pred             HHHHHHHHhhhh
Q psy10759        148 FSTSVSIVVTFV  159 (162)
Q Consensus       148 fa~s~sivlt~~  159 (162)
                      .+..+-=+++.+
T Consensus       307 v~~~lk~V~~iv  318 (350)
T PTZ00343        307 VANTLKRVVIIV  318 (350)
T ss_pred             HHHHHHHHHHhh
Confidence            555544444433

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=97.94  E-value=0.00034  Score=55.97  Aligned_cols=142  Identities=15%  Similarity=0.060  Sum_probs=87.6

Q ss_pred             CCccCCccchhHHHHHHHHHhhhhheeccCCCCccccccCCCCchhhHHHHHHHHHHhhhhHHHHHHhhhccCCCCchHH
Q psy10759          3 SNTEWGSKSLKKVFSLGVLLFGIVLIQIDESASESISRKSDNGNQLIGFGQVILASVSSGFTSVYLERIYKADGDDTLLI   82 (162)
Q Consensus         3 ~~~L~r~lS~~QW~aL~lL~~Gv~l~q~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~Sg~AgVy~E~~lK~~~~~s~~~   82 (162)
                      ..++|+|++++||.++.+-++|+.+...++.          ..+...|....+.++++=+...++..|..+ +.+.+...
T Consensus        92 ~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~----------~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~-~~~~~~~~  160 (260)
T TIGR00950        92 DLMGKERPRKLVLLAAVLGLAGAVLLLSDGN----------LSINPAGLLLGLGSGISFALGTVLYKRLVK-KEGPELLQ  160 (260)
T ss_pred             HHHccCCCcHHHHHHHHHHHHhHHhhccCCc----------ccccHHHHHHHHHHHHHHHHHHHHHhHHhh-cCCchHHH
Confidence            4568999999999999999999998764321          113467999999999999999999888776 44443333


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCccccccCccccCch--hHHHHHHHHhhhhHHHhhHHhhcchhHHHHHHHHHHHhhhhh
Q psy10759         83 KNLQLSLLSIPISMINVLLQDSDTVSQHGLFFGYDG--LVLTDVLFNALGGLIISLVLKHHDNITKIFSTSVSIVVTFVL  160 (162)
Q Consensus        83 ~N~qL~~~gi~~~~~~~~~~dg~~~~~~gff~G~~~--~~~~vi~~~A~gGl~va~v~KyadnI~K~fa~s~sivlt~~~  160 (162)
                      -|...+..+.++.+...+..+.+.    . .+..++  ..+.-++...++-.+....+|+.+.-.=........+.+.++
T Consensus       161 ~~~~~~~~~~~~l~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll  235 (260)
T TIGR00950       161 FTGWVLLLGALLLLPFAWFLGPNP----Q-ALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLL  235 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCC----C-cchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Confidence            343334455444444333332211    1 111111  222333344555566677788888766555555555555544

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=97.79  E-value=0.00021  Score=59.10  Aligned_cols=87  Identities=10%  Similarity=-0.006  Sum_probs=60.5

Q ss_pred             CCCccCCccchhHHHHHHHHHhhhhheeccCCCCccccccCCCCchhhHHHHHHHHHHhhhhHHHHHHhhhccCCCCchH
Q psy10759          2 GSNTEWGSKSLKKVFSLGVLLFGIVLIQIDESASESISRKSDNGNQLIGFGQVILASVSSGFTSVYLERIYKADGDDTLL   81 (162)
Q Consensus         2 g~~~L~r~lS~~QW~aL~lL~~Gv~l~q~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~Sg~AgVy~E~~lK~~~~~s~~   81 (162)
                      +..++|||++++||.++++-++|+.+.-.++           ......|.+.++.++++-++..++.+|..+ +.+.+.+
T Consensus       109 ~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~-----------~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~-~~~~~~~  176 (302)
T TIGR00817       109 SAFFLGQEFPSTLWLSLLPIVGGVALASDTE-----------LSFNWAGFLSAMISNITFVSRNIFSKKAMT-IKSLDKT  176 (302)
T ss_pred             HHHHhCCCCcHHHHHHHHHHHHHHhhhcCCc-----------ccccHHHHHHHHHHHHHHHHHHHHHHHhhc-cCCCCcc
Confidence            3457899999999999999999998753111           112367999999999999999999999887 3333434


Q ss_pred             HHHHHHHHHHHHHHHHHHH
Q psy10759         82 IKNLQLSLLSIPISMINVL  100 (162)
Q Consensus        82 ~~N~qL~~~gi~~~~~~~~  100 (162)
                      .-+......+.++.+....
T Consensus       177 ~~~~~~~~~~~~~l~p~~~  195 (302)
T TIGR00817       177 NLYAYISIMSLFLLSPPAF  195 (302)
T ss_pred             cHHHHHHHHHHHHHHHHHH
Confidence            3344444445444443333

specificities overlap.

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=97.74  E-value=0.0021  Score=53.27  Aligned_cols=62  Identities=16%  Similarity=0.239  Sum_probs=49.9

Q ss_pred             CccCCccchhHHHHHHHHHhhhhheeccCCCCccccccCCCCchhhHHHHHHHHHHhhhhHHHHHHhhhc
Q psy10759          4 NTEWGSKSLKKVFSLGVLLFGIVLIQIDESASESISRKSDNGNQLIGFGQVILASVSSGFTSVYLERIYK   73 (162)
Q Consensus         4 ~~L~r~lS~~QW~aL~lL~~Gv~l~q~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~Sg~AgVy~E~~lK   73 (162)
                      .++|+|++++||+++++-++|+.+.-.++.+        .......|.+..+.++++-+...++.+|..|
T Consensus       106 ~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~--------~~~~~~~G~~l~l~aal~~a~~~v~~~~~~~  167 (299)
T PRK11453        106 FTFGERLQGKQLAGIALAIFGVLVLIEDSLN--------GQHVAMLGFMLTLAAAFSWACGNIFNKKIMS  167 (299)
T ss_pred             HHhcCcCcHHHHHHHHHHHHhHHHhccccCC--------CcchhHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            4689999999999999999999987643221        1112357999999999999999999999776

>KOG3912|consensus

Probab=97.51  E-value=0.00033  Score=58.68  Aligned_cols=86  Identities=13%  Similarity=0.051  Sum_probs=63.7

Q ss_pred             CccCCccchhHHHHHHHHHhhhhheeccCCCCccccccCCCCchhhHHHHHHHHHHhhhhHHHHHHhhhccCCCCchHHH
Q psy10759          4 NTEWGSKSLKKVFSLGVLLFGIVLIQIDESASESISRKSDNGNQLIGFGQVILASVSSGFTSVYLERIYKADGDDTLLIK   83 (162)
Q Consensus         4 ~~L~r~lS~~QW~aL~lL~~Gv~l~q~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~Sg~AgVy~E~~lK~~~~~s~~~~   83 (162)
                      ++|+|++..+||+++...++|++.+-..+.... +++-.+..+...|.++++.+-++=+.-=||-||.+| +.+.+.-.-
T Consensus       132 ~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~-~~p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~-~~nV~pl~a  209 (372)
T KOG3912|consen  132 MFLNRTITGRQWLGILFVSLGLVIVGSLDVHLV-TDPYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLK-KSNVAPLQA  209 (372)
T ss_pred             HHHhcccchhhHHHHHHHHhhhheeeeeecccc-cCCccccccchhhhHHHHHHHHHHHHHHHHHHhhhh-hccCCHHHH
Confidence            589999999999999999999999876544321 112223357889999999999999999999999999 565543322


Q ss_pred             HHHHHHHH
Q psy10759         84 NLQLSLLS   91 (162)
Q Consensus        84 N~qL~~~g   91 (162)
                      --+=..||
T Consensus       210 vg~eGlfG  217 (372)
T KOG3912|consen  210 VGWEGLFG  217 (372)
T ss_pred             hhhhhhHH
Confidence            22224455

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=97.26  E-value=0.01  Score=48.91  Aligned_cols=77  Identities=17%  Similarity=0.139  Sum_probs=53.9

Q ss_pred             ccCCccchhHHHHHHHHHhhhhheeccCCCCccccccCCCCchhhHHHHHHHHHHhhhhHHHHHHhhhccCCCCchHHHH
Q psy10759          5 TEWGSKSLKKVFSLGVLLFGIVLIQIDESASESISRKSDNGNQLIGFGQVILASVSSGFTSVYLERIYKADGDDTLLIKN   84 (162)
Q Consensus         5 ~L~r~lS~~QW~aL~lL~~Gv~l~q~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~Sg~AgVy~E~~lK~~~~~s~~~~N   84 (162)
                      ++|+|++++||.++++-++|+.+...++..          +....|.+..+.++++=++..++.+|.-+ .  .+.....
T Consensus       116 ~~~e~~~~~~~~~~~la~~Gv~ll~~~~~~----------~~~~~G~l~~l~a~~~~a~~~~~~~~~~~-~--~~~~~~~  182 (292)
T PRK11272        116 LFGIRTRKLEWLGIAIGLAGIVLLNSGGNL----------SGNPWGAILILIASASWAFGSVWSSRLPL-P--VGMMAGA  182 (292)
T ss_pred             HhcccCchhHHHHHHHHHHhHHHHhcCccc----------ccchHHHHHHHHHHHHHHHHHHHHHhcCC-C--cchHHHH
Confidence            469999999999999999999987543211          12357999999999998999999888644 2  2344434


Q ss_pred             HHHHHHHHHH
Q psy10759         85 LQLSLLSIPI   94 (162)
Q Consensus        85 ~qL~~~gi~~   94 (162)
                      .|+-.-++..
T Consensus       183 ~~~~~~~~~~  192 (292)
T PRK11272        183 AEMLAAGVVL  192 (292)
T ss_pred             HHHHHHHHHH
Confidence            4444434433

>KOG1581|consensus

Probab=97.18  E-value=0.0074  Score=50.93  Aligned_cols=156  Identities=18%  Similarity=0.169  Sum_probs=112.4

Q ss_pred             CCCCccCCccchhHHHHHHHHHhhhhheeccCCCCccccccCCCCchhhHHHHHHHHHHhhhhHHHHHHhhhccCCCCch
Q psy10759          1 MGSNTEWGSKSLKKVFSLGVLLFGIVLIQIDESASESISRKSDNGNQLIGFGQVILASVSSGFTSVYLERIYKADGDDTL   80 (162)
Q Consensus         1 ~g~~~L~r~lS~~QW~aL~lL~~Gv~l~q~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~Sg~AgVy~E~~lK~~~~~s~   80 (162)
                      ||-.+-+||++....++.++..+|+.+..+.+.+++.  ....+.+.+.|+.++...-+.=||....-++++| +.+.+-
T Consensus       126 mg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~--~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~-~~k~s~  202 (327)
T KOG1581|consen  126 MGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSS--SKSGRENSPIGILLLFGYLLFDGFTNATQDSLFK-KYKVSS  202 (327)
T ss_pred             HHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCc--cccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhc-cCCccH
Confidence            4666789999999999999999999999887666522  2233457899999999999999999999999999 899999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCccccccCcccc---CchhHHHHHHHHhhhhHHHhhHHhhcchhHHHHH----HHHH
Q psy10759         81 LIKNLQLSLLSIPISMINVLLQDSDTVSQHGLFFG---YDGLVLTDVLFNALGGLIISLVLKHHDNITKIFS----TSVS  153 (162)
Q Consensus        81 ~~~N~qL~~~gi~~~~~~~~~~dg~~~~~~gff~G---~~~~~~~vi~~~A~gGl~va~v~KyadnI~K~fa----~s~s  153 (162)
                      |..-.-+-+|+.+.|+...+.++ .-.+.-.|-.-   .-+-..+.-++.|+|=+.+-..+..-++++=+-.    ..+|
T Consensus       203 ~~mM~~vNLf~~i~~~~~li~qg-~~~~av~F~~~hp~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~s  281 (327)
T KOG1581|consen  203 LHMMFGVNLFSAILNGTYLILQG-HLLPAVSFIKEHPDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVS  281 (327)
T ss_pred             hHHHHHHHHHHHHHHHHhhhcCC-CCchHHHHHHcChhHHHHHHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHH
Confidence            99999999999999998855443 21111112111   1122444556677777778877777777762222    2356


Q ss_pred             HHhhhhh
Q psy10759        154 IVVTFVL  160 (162)
Q Consensus       154 ivlt~~~  160 (162)
                      |+++++.
T Consensus       282 i~lS~i~  288 (327)
T KOG1581|consen  282 IMLSCIV  288 (327)
T ss_pred             HHHHHHH
Confidence            6666654

>PRK11689 aromatic amino acid exporter; Provisional

Probab=97.09  E-value=0.026  Score=46.67  Aligned_cols=71  Identities=6%  Similarity=-0.012  Sum_probs=51.5

Q ss_pred             CCccCCccchhHHHHHHHHHhhhhheeccCCCCccccccCCCCchhhHHHHHHHHHHhhhhHHHHHHhhhc
Q psy10759          3 SNTEWGSKSLKKVFSLGVLLFGIVLIQIDESASESISRKSDNGNQLIGFGQVILASVSSGFTSVYLERIYK   73 (162)
Q Consensus         3 ~~~L~r~lS~~QW~aL~lL~~Gv~l~q~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~Sg~AgVy~E~~lK   73 (162)
                      ..++|+|++++||.++++=++|+.+.-.++...+..+......+...|..+.+.++++-++..++.+|..+
T Consensus       110 ~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~  180 (295)
T PRK11689        110 VLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLSYGLAFIGAFIWAAYCNVTRKYAR  180 (295)
T ss_pred             HHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHHHHHHHHHHHHHHHHHHHHhhccC
Confidence            34689999999999999999999887654321110000001123456999999999999999999999765

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=96.98  E-value=0.041  Score=43.84  Aligned_cols=61  Identities=16%  Similarity=0.213  Sum_probs=51.9

Q ss_pred             ccCCccchhHHHHHHHHHhhhhheeccCCCCccccccCCCCchhhHHHHHHHHHHhhhhHHHHHHhhhc
Q psy10759          5 TEWGSKSLKKVFSLGVLLFGIVLIQIDESASESISRKSDNGNQLIGFGQVILASVSSGFTSVYLERIYK   73 (162)
Q Consensus         5 ~L~r~lS~~QW~aL~lL~~Gv~l~q~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~Sg~AgVy~E~~lK   73 (162)
                      ++++|.+++||.++++.+.|+.++..++....       .. ...|....+.+++.-++..++.++..|
T Consensus       118 ~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~-------~~-~~~g~~~~l~a~~~~a~~~~~~~~~~~  178 (292)
T COG0697         118 LLGERLSLLQILGILLALAGVLLILLGGGGGG-------IL-SLLGLLLALAAALLWALYTALVKRLSR  178 (292)
T ss_pred             HccCCCcHHHHHHHHHHHHhHHheecCCCcch-------hH-HHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            45999999999999999999999987766431       01 689999999999999999999999884

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=96.87  E-value=0.071  Score=45.84  Aligned_cols=94  Identities=19%  Similarity=0.178  Sum_probs=58.4

Q ss_pred             cCCccchhHHHHHHHHHhhhhheeccCCCC--c------------cccccCCCCchhhHHHHHHHHHHhhhhHHHHHHhh
Q psy10759          6 EWGSKSLKKVFSLGVLLFGIVLIQIDESAS--E------------SISRKSDNGNQLIGFGQVILASVSSGFTSVYLERI   71 (162)
Q Consensus         6 L~r~lS~~QW~aL~lL~~Gv~l~q~~~~~~--~------------~~~~~~~~~~~~~G~~~vl~~~~~Sg~AgVy~E~~   71 (162)
                      +++|++++||+++++=++|+.+.-..+...  .            +........+...|....+.++++=++..++..+.
T Consensus       132 ~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~  211 (358)
T PLN00411        132 FKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHI  211 (358)
T ss_pred             hcccccHHHHHHHHHHHHHHHHHHHccCcccccccccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            599999999999999999999765422110  0            00001112345679999999999999999999888


Q ss_pred             hccCCCCchHHHHHHHHHHHHHHHHHHHH
Q psy10759         72 YKADGDDTLLIKNLQLSLLSIPISMINVL  100 (162)
Q Consensus        72 lK~~~~~s~~~~N~qL~~~gi~~~~~~~~  100 (162)
                      .+ +.+......-.+..+.++++......
T Consensus       212 ~~-~~~~~~~~t~~~~~~~~~~~~~~~l~  239 (358)
T PLN00411        212 MS-EYPAAFTVSFLYTVCVSIVTSMIGLV  239 (358)
T ss_pred             HH-HcCcHhHHHHHHHHHHHHHHHHHHHH
Confidence            77 44332222222333344554444443

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=96.21  E-value=0.092  Score=38.54  Aligned_cols=112  Identities=18%  Similarity=0.173  Sum_probs=67.4

Q ss_pred             HHHHHHHHHHhhhhHHHHHHhhhccC----CCCchHHHHHHHHHHHHHHHHHHHHhcCCcccccc--Cccc-cC--chhH
Q psy10759         50 GFGQVILASVSSGFTSVYLERIYKAD----GDDTLLIKNLQLSLLSIPISMINVLLQDSDTVSQH--GLFF-GY--DGLV  120 (162)
Q Consensus        50 G~~~vl~~~~~Sg~AgVy~E~~lK~~----~~~s~~~~N~qL~~~gi~~~~~~~~~~dg~~~~~~--gff~-G~--~~~~  120 (162)
                      |+..++.+++++++-.++.|+.+|+.    .+.+-+..-...+..+.++.+...++.|+.+..+.  ..++ ..  ++..
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            67889999999999999999999942    23333333333455666666666666555331111  1111 11  2344


Q ss_pred             HHHHHHHhhhhHH----HhhHHhhcchhHHHHHHHHHHHhhhhhc
Q psy10759        121 LTDVLFNALGGLI----ISLVLKHHDNITKIFSTSVSIVVTFVLK  161 (162)
Q Consensus       121 ~~vi~~~A~gGl~----va~v~KyadnI~K~fa~s~sivlt~~~s  161 (162)
                      +..++..++-+..    .-.++|+...+.-..+..+-.+++.++|
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s  125 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLS  125 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHH
Confidence            5555554544433    4567888888877777666666655543

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=95.78  E-value=0.2  Score=41.32  Aligned_cols=135  Identities=10%  Similarity=-0.019  Sum_probs=70.2

Q ss_pred             CCccCCccchhHHHHHHHHHhhhhheeccCCCCccccccCCCCchhhHHHHHHHHHHhhhhHHHHHHhhhccCCCCchHH
Q psy10759          3 SNTEWGSKSLKKVFSLGVLLFGIVLIQIDESASESISRKSDNGNQLIGFGQVILASVSSGFTSVYLERIYKADGDDTLLI   82 (162)
Q Consensus         3 ~~~L~r~lS~~QW~aL~lL~~Gv~l~q~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~Sg~AgVy~E~~lK~~~~~s~~~   82 (162)
                      ..++|+|++++||.++++=++|+.+.-.+.. +          ..    ...+.++++-++..++.+|..+ +...+...
T Consensus       118 ~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~-~----------~~----~~~l~aa~~~a~~~i~~r~~~~-~~~~~~~~  181 (296)
T PRK15430        118 MIFLGERFRRMQWLAVILAICGVLVQLWTFG-S----------LP----IIALGLAFSFAFYGLVRKKIAV-EAQTGMLI  181 (296)
T ss_pred             HHHhcCCCcHHHHHHHHHHHHHHHHHHHHcC-C----------cc----HHHHHHHHHHHHHHHHHHhcCC-CCchhHHH
Confidence            4568999999999999999999998642211 0          11    2345566677777777777543 22234455


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCccccccCccccCchhHH--HHHHHHhhhhHHHhhHHhhcchhHHHHHHHHHHHhhh
Q psy10759         83 KNLQLSLLSIPISMINVLLQDSDTVSQHGLFFGYDGLVL--TDVLFNALGGLIISLVLKHHDNITKIFSTSVSIVVTF  158 (162)
Q Consensus        83 ~N~qL~~~gi~~~~~~~~~~dg~~~~~~gff~G~~~~~~--~vi~~~A~gGl~va~v~KyadnI~K~fa~s~sivlt~  158 (162)
                      .+..+..++.+..+.  +..+...  .. ....+.++.+  ...+..+++=++....+|+.|.-.=..-.-+.-+++.
T Consensus       182 ~~~~~~~~~~~~~~~--~~~~~~~--~~-~~~~~~~~~~~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~  254 (296)
T PRK15430        182 ETMWLLPVAAIYLFA--IADSSTS--HM-GQNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMF  254 (296)
T ss_pred             HHHHHHHHHHHHHHH--HccCCcc--cc-cCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence            565555555443221  1111110  00 0111111111  1122344555566777888886554444444444443

>KOG1582|consensus

Probab=95.22  E-value=0.13  Score=43.31  Aligned_cols=136  Identities=16%  Similarity=0.236  Sum_probs=88.2

Q ss_pred             CCCCccCCccchhHHHHHHHHHhhhhheeccCCCCccccccCCCCchhhHHHHHHHHHHhhhhHHHHHHhhhccCCCCch
Q psy10759          1 MGSNTEWGSKSLKKVFSLGVLLFGIVLIQIDESASESISRKSDNGNQLIGFGQVILASVSSGFTSVYLERIYKADGDDTL   80 (162)
Q Consensus         1 ~g~~~L~r~lS~~QW~aL~lL~~Gv~l~q~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~Sg~AgVy~E~~lK~~~~~s~   80 (162)
                      ||...=+||+..+...|-.++.+|.+...+.+.+.+      ++. ..+|+.++-.+-+.=++-|=.-||.+|. .+.+-
T Consensus       149 ggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~s------PNF-~~~Gv~mIsgALl~DA~iGNvQEk~m~~-~~~ss  220 (367)
T KOG1582|consen  149 GGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTS------PNF-NLIGVMMISGALLADAVIGNVQEKAMKM-NPASS  220 (367)
T ss_pred             eeeeeccccccHHHHHHHHHHHHHHHhhhhcccccC------CCc-ceeeHHHHHHHHHHHHHhhHHHHHHHhh-CCCCc
Confidence            456667899999999999999999999998776532      222 4789988888888889999999999994 33332


Q ss_pred             HHHHHHHHHH--HHHHHHHHHHhcCCccccccCccccCc-----hh-HHHHHHHHhhhhHH-HhhHHhhcchhHHHHHHH
Q psy10759         81 LIKNLQLSLL--SIPISMINVLLQDSDTVSQHGLFFGYD-----GL-VLTDVLFNALGGLI-ISLVLKHHDNITKIFSTS  151 (162)
Q Consensus        81 ~~~N~qL~~~--gi~~~~~~~~~~dg~~~~~~gff~G~~-----~~-~~~vi~~~A~gGl~-va~v~KyadnI~K~fa~s  151 (162)
                        .-+-+|.+  |.++-+..+.++ |      ++|.+|+     |+ +....+.-+..|.+ +..|+    +..|.|...
T Consensus       221 --~EmvfySy~iG~vflf~~mvlT-g------e~f~a~~fcaehp~~tyGy~~~~s~~gylG~~~VL----alI~~fGA~  287 (367)
T KOG1582|consen  221 --SEMVFYSYGIGFVFLFAPMVLT-G------ELFSAWTFCAEHPVRTYGYAFLFSLAGYLGIVFVL----ALIKLFGAL  287 (367)
T ss_pred             --ceEEEeeecccHHHHHHHHHhc-c------cchhhhHHHHhCcHhHHHHHHHHHHHhHhhHHHHH----HHHHHhchh
Confidence              11223444  455666666654 3      3444443     34 66666666666653 33333    234555544


Q ss_pred             HHHHhh
Q psy10759        152 VSIVVT  157 (162)
Q Consensus       152 ~sivlt  157 (162)
                      .+..+|
T Consensus       288 ~aatvT  293 (367)
T KOG1582|consen  288 IAATVT  293 (367)
T ss_pred             HHHHHH
Confidence            444433

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=95.14  E-value=0.13  Score=42.06  Aligned_cols=60  Identities=10%  Similarity=0.109  Sum_probs=41.0

Q ss_pred             CCccCCccchhHHHHHHHHHhhhhheeccCCCCccccccCCCCchhhHHHHHHHHHHhhhhHHHHHHhhh
Q psy10759          3 SNTEWGSKSLKKVFSLGVLLFGIVLIQIDESASESISRKSDNGNQLIGFGQVILASVSSGFTSVYLERIY   72 (162)
Q Consensus         3 ~~~L~r~lS~~QW~aL~lL~~Gv~l~q~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~Sg~AgVy~E~~l   72 (162)
                      ..++|+|++++||.++.+-+.|+.+...++...          ....|....+.++++-+...++.++..
T Consensus       108 ~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~----------~~~~g~~~~l~aal~~a~~~i~~k~~~  167 (281)
T TIGR03340       108 TLTLGETLSPLAWLGILIITLGLLVLGLSRFAQ----------HRRKAYAWALAAALGTAIYSLSDKAAA  167 (281)
T ss_pred             HHHHcCCCCHHHHHHHHHHHHHHHHHhcccccc----------cchhHHHHHHHHHHHHHHhhhhccccc
Confidence            346899999999999999999999875432110          113466566667776666666555543

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>KOG1580|consensus

Probab=94.51  E-value=0.29  Score=40.52  Aligned_cols=95  Identities=18%  Similarity=0.158  Sum_probs=70.6

Q ss_pred             CCCccCCccchhHHHHHHHHHhhhhheeccCCCCccccccCCCCchhhHHHHHHHHHHhhhhHHHHHHhhhcc-CCCCch
Q psy10759          2 GSNTEWGSKSLKKVFSLGVLLFGIVLIQIDESASESISRKSDNGNQLIGFGQVILASVSSGFTSVYLERIYKA-DGDDTL   80 (162)
Q Consensus         2 g~~~L~r~lS~~QW~aL~lL~~Gv~l~q~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~Sg~AgVy~E~~lK~-~~~~s~   80 (162)
                      |-.+.+|+++.++..+.++.++||++.-+.+.+-.    ..++.....|=++.+++-..-|+.|+.-|++-+. .+..+.
T Consensus       129 GVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~----g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~  204 (337)
T KOG1580|consen  129 GVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVG----GAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTS  204 (337)
T ss_pred             ehhhhcccccHHHHHHHHHHHHHHHHhhccccccC----CCcccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchh
Confidence            55678999999999999999999999988766532    2334466788899999999999999999999884 222345


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhc
Q psy10759         81 LIKNLQLSLLSIPISMINVLLQ  102 (162)
Q Consensus        81 ~~~N~qL~~~gi~~~~~~~~~~  102 (162)
                      .++|+.++  |-+....+++++
T Consensus       205 MM~~~Nlw--StL~Lg~g~lfT  224 (337)
T KOG1580|consen  205 MMFYTNLW--STLYLGAGLLFT  224 (337)
T ss_pred             hHHHHHHH--HHHHhhhhheeh
Confidence            66666554  555444555543

>TIGR00688 rarD rarD protein

Probab=93.91  E-value=1.5  Score=35.06  Aligned_cols=55  Identities=5%  Similarity=-0.074  Sum_probs=37.3

Q ss_pred             CCccCCccchhHHHHHHHHHhhhhheeccCCCCccccccCCCCchhhHHHHHHHHHHhhhhHHHHHHhhh
Q psy10759          3 SNTEWGSKSLKKVFSLGVLLFGIVLIQIDESASESISRKSDNGNQLIGFGQVILASVSSGFTSVYLERIY   72 (162)
Q Consensus         3 ~~~L~r~lS~~QW~aL~lL~~Gv~l~q~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~Sg~AgVy~E~~l   72 (162)
                      ..++|+|++++||.++.+-++|+++.-.++.         +  ..    ..++.++++-++..++.++.-
T Consensus       115 ~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~---------~--~~----~~~l~aa~~~a~~~i~~~~~~  169 (256)
T TIGR00688       115 RVFLKERISRFQFIAVIIATLGVISNIVLKG---------S--LP----WEALVLAFSFTAYGLIRKALK  169 (256)
T ss_pred             HHHHhcCCCHHHHHHHHHHHHHHHHHHHHcC---------C--ch----HHHHHHHHHHHHHHHHHhhcC
Confidence            3568999999999999999999997642211         0  11    124455666666677776643

This uncharacterized protein is predicted to have many membrane-spanning domains.

>KOG1443|consensus

Probab=92.85  E-value=0.9  Score=38.73  Aligned_cols=114  Identities=21%  Similarity=0.324  Sum_probs=66.8

Q ss_pred             HHHHHHhhhhheeccCCCCccccccCCCCchhhHHHHHHHHHHhhhhHHHHHHhhhccCCCCchHHHH-------HHHHH
Q psy10759         17 SLGVLLFGIVLIQIDESASESISRKSDNGNQLIGFGQVILASVSSGFTSVYLERIYKADGDDTLLIKN-------LQLSL   89 (162)
Q Consensus        17 aL~lL~~Gv~l~q~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~Sg~AgVy~E~~lK~~~~~s~~~~N-------~qL~~   89 (162)
                      ...+..+|+.+..+.+.+           -...|+..+..++++||+..+|.|+++++ .  +.|.||       +|..+
T Consensus       143 ~v~lI~~Glflft~KsTq-----------f~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~-~--~~~~~~P~~ti~~l~p~M  208 (349)
T KOG1443|consen  143 IVLLIAVGLFLFTYKSTQ-----------FNIEGFFLVLAASLLSGLRWAFTQMLLRN-Q--PSAKRNPIDTIFHLQPWM  208 (349)
T ss_pred             HHHHHhhheeEEEecccc-----------eeehhHHHHHHHHHhhhhhHHHHHHHHhc-C--ccccCCCeeeHHHhhhHH
Confidence            345566777777776553           34789999999999999999999999994 2  223333       33221


Q ss_pred             HHHHHHHHHHHhcCCccccccCccccCch-hHHHHHHHHhhhhHHHhhHHhhcchhHH
Q psy10759         90 LSIPISMINVLLQDSDTVSQHGLFFGYDG-LVLTDVLFNALGGLIISLVLKHHDNITK  146 (162)
Q Consensus        90 ~gi~~~~~~~~~~dg~~~~~~gff~G~~~-~~~~vi~~~A~gGl~va~v~KyadnI~K  146 (162)
                       ++..-.....++..........|+-++. ..|-++..-+.||+ .++++-.+.=+++
T Consensus       209 -~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l~g~-laF~l~~sEflLl  264 (349)
T KOG1443|consen  209 -SIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISLGGL-LAFLLEFSEFLLL  264 (349)
T ss_pred             -HHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHHHHH-HHHHHHHHHHhee
Confidence             1111112223333333333444444443 25556666677887 5666666554443

>KOG1441|consensus

Probab=92.41  E-value=0.056  Score=45.94  Aligned_cols=83  Identities=18%  Similarity=0.303  Sum_probs=66.6

Q ss_pred             CccCCccchhHHHHHHHHHhhhhheeccCCCCccccccCCCCchhhHHHHHHHHHHhhhhHHHHHHhhhccCCCCchHHH
Q psy10759          4 NTEWGSKSLKKVFSLGVLLFGIVLIQIDESASESISRKSDNGNQLIGFGQVILASVSSGFTSVYLERIYKADGDDTLLIK   83 (162)
Q Consensus         4 ~~L~r~lS~~QW~aL~lL~~Gv~l~q~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~Sg~AgVy~E~~lK~~~~~s~~~~   83 (162)
                      .+.+|+.++.-|++|+....||++...++.+           -.+.|++..+.+.+..++-.+|.|+++| +++  .-+.
T Consensus       129 ~~~~~~~s~~~~lsL~piv~GV~ias~~e~~-----------fn~~G~i~a~~s~~~~al~~I~~~~ll~-~~~--~~~~  194 (316)
T KOG1441|consen  129 LLLGKTYSSMTYLSLLPIVFGVAIASVTELS-----------FNLFGFISAMISNLAFALRNILSKKLLT-SKG--ESLN  194 (316)
T ss_pred             HHhCCCCcceEEEEEEEeeeeEEEeeecccc-----------ccHHHHHHHHHHHHHHHHHHHHHHHhhh-ccc--cccC
Confidence            4678999999999999999999998875443           3489999999999999999999999998 333  4456


Q ss_pred             HHHHHHHHHHHHHHHHH
Q psy10759         84 NLQLSLLSIPISMINVL  100 (162)
Q Consensus        84 N~qL~~~gi~~~~~~~~  100 (162)
                      +++|+-+-.++.+...+
T Consensus       195 ~~~ll~y~ap~s~~~Ll  211 (316)
T KOG1441|consen  195 SMNLLYYTAPISLIFLL  211 (316)
T ss_pred             chHHHHHhhhHHHHHHh
Confidence            67777666666665544

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=90.66  E-value=8.4  Score=31.63  Aligned_cols=131  Identities=12%  Similarity=-0.036  Sum_probs=68.6

Q ss_pred             CccchhHHHHHHHHHhhhhheeccCCCCccccccCCCCchhhHHHHHHHHHHhhhhHHHHHHhhhccCCCCchHHHHHHH
Q psy10759          8 GSKSLKKVFSLGVLLFGIVLIQIDESASESISRKSDNGNQLIGFGQVILASVSSGFTSVYLERIYKADGDDTLLIKNLQL   87 (162)
Q Consensus         8 r~lS~~QW~aL~lL~~Gv~l~q~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~Sg~AgVy~E~~lK~~~~~s~~~~N~qL   87 (162)
                      ||.++.+|++  +-++|+.+.-.+..+.        ......|.+..+.++++=++.-++..|..+ +. .+.. ...+.
T Consensus       117 ~~~~~~~~~~--i~~~Gv~li~~~~~~~--------~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~-~~-~~~~-~~~~~  183 (293)
T PRK10532        117 RRPVDFVWVV--LAVLGLWFLLPLGQDV--------SHVDLTGAALALGAGACWAIYILSGQRAGA-EH-GPAT-VAIGS  183 (293)
T ss_pred             CChHHHHHHH--HHHHHHheeeecCCCc--------ccCChHHHHHHHHHHHHHHHHHHHHHHHhc-cC-CchH-HHHHH
Confidence            5555666654  4578887754322211        112357999999999998888888888866 32 2333 23333


Q ss_pred             HHHHHHHHHHHHHhcCCccccccCccccCchh-----HHHHHHHHhhhhHHHhhHHhhcchhHHHHHHHHHHHhhhhh
Q psy10759         88 SLLSIPISMINVLLQDSDTVSQHGLFFGYDGL-----VLTDVLFNALGGLIISLVLKHHDNITKIFSTSVSIVVTFVL  160 (162)
Q Consensus        88 ~~~gi~~~~~~~~~~dg~~~~~~gff~G~~~~-----~~~vi~~~A~gGl~va~v~KyadnI~K~fa~s~sivlt~~~  160 (162)
                       +++...........+++     -   .+++.     .++.++...++=.+-..-+|+.+.-.=+.-..+.-+.+.++
T Consensus       184 -~~~~~~l~~~~~~~~~~-----~---~~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~  252 (293)
T PRK10532        184 -LIAALIFVPIGALQAGE-----A---LWHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVS  252 (293)
T ss_pred             -HHHHHHHHHHHHHccCc-----c---cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHH
Confidence             33333322222222211     0   12332     23333333334345567778877665555555555555443

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=89.56  E-value=2.9  Score=34.86  Aligned_cols=137  Identities=11%  Similarity=0.171  Sum_probs=74.3

Q ss_pred             CCCccCCccchhHHH----HHHHHHhhhhheeccCCCCccccccCCCCchhhHHHHHHHHHHhhhhHHHHHHhhhccCCC
Q psy10759          2 GSNTEWGSKSLKKVF----SLGVLLFGIVLIQIDESASESISRKSDNGNQLIGFGQVILASVSSGFTSVYLERIYKADGD   77 (162)
Q Consensus         2 g~~~L~r~lS~~QW~----aL~lL~~Gv~l~q~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~Sg~AgVy~E~~lK~~~~   77 (162)
                      |..+++.--+..||.    |++++.+|+.+....+.+++   +.++.++...|+...+++.+--.+ -..+-+..+-+.-
T Consensus        90 gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~~---~~~~~~~~~kgi~~Ll~stigy~~-Y~~~~~~~~~~~~  165 (269)
T PF06800_consen   90 GVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKSD---KSSSKSNMKKGILALLISTIGYWI-YSVIPKAFHVSGW  165 (269)
T ss_pred             HHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcccccccc---ccccccchhhHHHHHHHHHHHHHH-HHHHHHhcCCChh
Confidence            455677777788887    89999999999888776643   112244667777765555433222 1112222221111


Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHhcC--CccccccCccccCch--hHHHHHHHHhhhhHHHhhHHhhcchhH
Q psy10759         78 DTLLIKNLQLSLLSIPISMINVLLQD--SDTVSQHGLFFGYDG--LVLTDVLFNALGGLIISLVLKHHDNIT  145 (162)
Q Consensus        78 ~s~~~~N~qL~~~gi~~~~~~~~~~d--g~~~~~~gff~G~~~--~~~~vi~~~A~gGl~va~v~KyadnI~  145 (162)
                      .-+.-|.+=+.+-+++++...   ++  .++..-.+.+.|.-|  -.+..++...-.|..+++.+...+-|+
T Consensus       166 ~~~lPqaiGm~i~a~i~~~~~---~~~~~~k~~~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvI  234 (269)
T PF06800_consen  166 SAFLPQAIGMLIGAFIFNLFS---KKPFFEKKSWKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVI  234 (269)
T ss_pred             HhHHHHHHHHHHHHHHHhhcc---cccccccchHHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHH
Confidence            223445554554445544432   11  011122344455332  245556666677888888877776554

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=88.90  E-value=0.28  Score=36.00  Aligned_cols=34  Identities=32%  Similarity=0.228  Sum_probs=29.0

Q ss_pred             CCCccCCccchhHHHHHHHHHhhhhheeccCCCC
Q psy10759          2 GSNTEWGSKSLKKVFSLGVLLFGIVLIQIDESAS   35 (162)
Q Consensus         2 g~~~L~r~lS~~QW~aL~lL~~Gv~l~q~~~~~~   35 (162)
                      |..+++.++|..||+.+.++.+|++..+..+.+.
T Consensus        75 g~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~~~~  108 (120)
T PRK10452         75 SVLLFDESLSLMKIAGLTTLVAGIVLIKSGTRKA  108 (120)
T ss_pred             HHHHhCCCCCHHHHHHHHHHHHHHHHhhcCCCCC
Confidence            4457899999999999999999999998766443

>KOG1444|consensus

Probab=86.66  E-value=5.5  Score=33.90  Aligned_cols=116  Identities=20%  Similarity=0.210  Sum_probs=72.8

Q ss_pred             ccCCccchhHHHHHHHHHhhhhheeccCCCCccccccCCCCchhhHHHHHHHHHHhhhhHHHHHHhhhccCCCCc----h
Q psy10759          5 TEWGSKSLKKVFSLGVLLFGIVLIQIDESASESISRKSDNGNQLIGFGQVILASVSSGFTSVYLERIYKADGDDT----L   80 (162)
Q Consensus         5 ~L~r~lS~~QW~aL~lL~~Gv~l~q~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~Sg~AgVy~E~~lK~~~~~s----~   80 (162)
                      ++|+|.++.=|.|+.+..+|....-.++...           ...|+.-.++.|++...=++|.++..| ..+.+    .
T Consensus       124 f~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf-----------~~~gY~w~~~n~~~~a~~~v~~kk~vd-~~~l~~~~lv  191 (314)
T KOG1444|consen  124 FFGKRPSNKVWASVFAMIIGSVAAAFTDLSF-----------NLRGYSWALANCLTTAAFVVYVKKSVD-SANLNKFGLV  191 (314)
T ss_pred             hcCcCchhhHHHHHHHHHHHHHhhcccccee-----------cchhHHHHHHHHHHHHHHHHHHHHhhc-cccccceeEE
Confidence            5789999999999999999987766544432           233888999999999999999999998 44332    2


Q ss_pred             HHHHHHHHHHHHHHHHHHHHh-cCCccccccCccccCchhHHHHHHHHhhhhHHHhhH
Q psy10759         81 LIKNLQLSLLSIPISMINVLL-QDSDTVSQHGLFFGYDGLVLTDVLFNALGGLIISLV  137 (162)
Q Consensus        81 ~~~N~qL~~~gi~~~~~~~~~-~dg~~~~~~gff~G~~~~~~~vi~~~A~gGl~va~v  137 (162)
                      ...|+    +++++..+..++ .|.+++ ...+=.-+++.+|..+.+.-+.|+.+++.
T Consensus       192 ~yNnl----~~L~~l~~~~~~~ge~~~l-~~~~~~~~~~~~~~~~~lScv~gf~isy~  244 (314)
T KOG1444|consen  192 FYNNL----LSLPPLLILSFITGELDAL-SLNFDNWSDSSVLVVMLLSCVMGFGISYT  244 (314)
T ss_pred             eehhH----HHHHHHHHHHHHhcchHHH-HhhcccccchhHHHHHHHHHHHHHHHHHH
Confidence            23333    344444333333 332211 11111122355677777766777666554

>KOG2766|consensus

Probab=85.33  E-value=0.047  Score=45.46  Aligned_cols=91  Identities=18%  Similarity=0.154  Sum_probs=70.3

Q ss_pred             ccCCccchhHHHHHHHHHhhhhheeccCCCCccccccCCCCchhhHHHHHHHHHHhhhhHHHHHHhhhccCCCCchHHHH
Q psy10759          5 TEWGSKSLKKVFSLGVLLFGIVLIQIDESASESISRKSDNGNQLIGFGQVILASVSSGFTSVYLERIYKADGDDTLLIKN   84 (162)
Q Consensus         5 ~L~r~lS~~QW~aL~lL~~Gv~l~q~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~Sg~AgVy~E~~lK~~~~~s~~~~N   84 (162)
                      +|+.|+-..|..+.+....|++++-.++..+.   ++....|+..|=.++++.+.+=+.+.+--|...|   +.+...--
T Consensus       125 fLktrYrlmki~gV~iCi~GvvmvV~sDV~ag---d~aggsnp~~GD~lvi~GATlYaVSNv~EEflvk---n~d~~elm  198 (336)
T KOG2766|consen  125 FLKTRYRLMKISGVVICIVGVVMVVFSDVHAG---DRAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVK---NADRVELM  198 (336)
T ss_pred             HHHHHHhhheeeeEEeEecceEEEEEeeeccc---cccCCCCCccCcEEEEecceeeeeccccHHHHHh---cCcHHHHH
Confidence            56677777777788888889988877766542   3344568888888999999999999999999999   34555556


Q ss_pred             HHHHHHHHHHHHHHHHh
Q psy10759         85 LQLSLLSIPISMINVLL  101 (162)
Q Consensus        85 ~qL~~~gi~~~~~~~~~  101 (162)
                      -+|.+||.+++.+..+.
T Consensus       199 ~~lgLfGaIIsaIQ~i~  215 (336)
T KOG2766|consen  199 GFLGLFGAIISAIQFIF  215 (336)
T ss_pred             HHHHHHHHHHHHHHHhh
Confidence            67888999888888444

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=82.95  E-value=6.5  Score=32.51  Aligned_cols=88  Identities=11%  Similarity=0.072  Sum_probs=56.5

Q ss_pred             CCccCCccchhH----HHHHHHHHhhhhheeccCCCCccccccCCCCchhhHHHHHHHHHHhhhhHHHHHHhhhccCCCC
Q psy10759          3 SNTEWGSKSLKK----VFSLGVLLFGIVLIQIDESASESISRKSDNGNQLIGFGQVILASVSSGFTSVYLERIYKADGDD   78 (162)
Q Consensus         3 ~~~L~r~lS~~Q----W~aL~lL~~Gv~l~q~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~Sg~AgVy~E~~lK~~~~~   78 (162)
                      ..++|++.+++|    +.++++.++|+.++-..+.++.   ++.+..+...|+...+.+++.=++..+..++. +   .+
T Consensus       105 ~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~---~~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~-~---~~  177 (290)
T TIGR00776       105 VIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSA---GIKSEFNFKKGILLLLMSTIGYLVYVVVAKAF-G---VD  177 (290)
T ss_pred             HHHhhhccchHHHHHHHHHHHHHHHhHheEEecccccc---ccccccchhhHHHHHHHHHHHHHHHHHHHHHc-C---CC
Confidence            456789999999    9999999999999865532211   10011344679988888888877777888764 2   22


Q ss_pred             chHH---HHHHHHHHHHHHHHH
Q psy10759         79 TLLI---KNLQLSLLSIPISMI   97 (162)
Q Consensus        79 s~~~---~N~qL~~~gi~~~~~   97 (162)
                      +...   |-.-+.+.+++++..
T Consensus       178 ~~~~~~~~~~g~~~~~~~~~~~  199 (290)
T TIGR00776       178 GLSVLLPQAIGMVIGGIIFNLG  199 (290)
T ss_pred             cceehhHHHHHHHHHHHHHHHH
Confidence            3333   444444555555543

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG1442|consensus

Probab=82.33  E-value=9.6  Score=32.32  Aligned_cols=90  Identities=13%  Similarity=0.117  Sum_probs=69.1

Q ss_pred             chhhHHHHHHHHHHhhhhHHHHHHhhhccCCCCchHHHHHHHHHHHHHHHHHHHHhcCCccccccCccccCchhHHHHHH
Q psy10759         46 NQLIGFGQVILASVSSGFTSVYLERIYKADGDDTLLIKNLQLSLLSIPISMINVLLQDSDTVSQHGLFFGYDGLVLTDVL  125 (162)
Q Consensus        46 ~~~~G~~~vl~~~~~Sg~AgVy~E~~lK~~~~~s~~~~N~qL~~~gi~~~~~~~~~~dg~~~~~~gff~G~~~~~~~vi~  125 (162)
                      -.+.|++.-+.+++.-++=++|+.|.+- ..++.+|.-......+..+..+....+ .||--.-.+|=|=++++-|.+..
T Consensus       182 ls~~GvifGVlaSl~vAlnaiytkk~l~-~v~~~iw~lt~ynnv~a~lLflpll~l-nge~~~v~~~~~l~a~~Fw~~mt  259 (347)
T KOG1442|consen  182 LSWIGVIFGVLASLAVALNAIYTKKVLP-PVGDCIWRLTAYNNVNALLLFLPLLIL-NGEFQAVVGFPHLPAIKFWILMT  259 (347)
T ss_pred             cchhhhHHHHHHHHHHHHHHHhhheecc-cccCeehhhHHHHHHHHHHHHHHHHHH-cchHHHHcCcccchHHHHHHHHH
Confidence            4688999999999999999999998887 677899999999999888777666554 34321224555556788899888


Q ss_pred             HHhhhhHHHhhH
Q psy10759        126 FNALGGLIISLV  137 (162)
Q Consensus       126 ~~A~gGl~va~v  137 (162)
                      +..+-|..+.+|
T Consensus       260 LsglfgF~mgyv  271 (347)
T KOG1442|consen  260 LSGLFGFAMGYV  271 (347)
T ss_pred             HHHHHHHHhhhe
Confidence            888777766655

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	162
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	83.74
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	81.73

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=83.74  E-value=0.35  Score=33.42  Aligned_cols=31  Identities=10%  Similarity=0.112  Sum_probs=27.1

Q ss_pred             CCCccCCccchhHHHHHHHHHhhhhheeccC
Q psy10759          2 GSNTEWGSKSLKKVFSLGVLLFGIVLIQIDE   32 (162)
Q Consensus         2 g~~~L~r~lS~~QW~aL~lL~~Gv~l~q~~~   32 (162)
                      |..++|.++|+.||+.+.+..+|+.+.+..+
T Consensus        75 ~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           75 SWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            3457899999999999999999999988754

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=81.73  E-value=0.22  Score=36.11  Aligned_cols=31  Identities=10%  Similarity=0.112  Sum_probs=20.6

Q ss_pred             CCCccCCccchhHHHHHHHHHhhhhheeccC
Q psy10759          2 GSNTEWGSKSLKKVFSLGVLLFGIVLIQIDE   32 (162)
Q Consensus         2 g~~~L~r~lS~~QW~aL~lL~~Gv~l~q~~~   32 (162)
                      |..+++.++|..||+.+.+..+|+.+.+..+
T Consensus        75 g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           75 SWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            3457899999999999999999999987654

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00