Psyllid ID: psy10784


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------7
MDFLFDLNSLGFVPDTFNAMVRGIALSISRAHNNLQEGRLFVSKGELLDANINRSPTAYLQNPEEERMR
ccccccccccccccHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEccccccccHHHHHcccHHHHcc
cEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEcEEEccccccccHHHHHHccHHHHcc
mdflfdlnslgfvpdtfNAMVRGIALSISRAHNnlqegrlfvskgelldaninrsptaylqnpeeermr
MDFLFDLNSLGFVPDTFNAMVRGIALSISRAHNNLQEGRLFVSKgelldaninrsptaylqnpeeermr
MDFLFDLNSLGFVPDTFNAMVRGIALSISRAHNNLQEGRLFVSKGELLDANINRSPTAYLQNPEEERMR
**FLFDLNSLGFVPDTFNAMVRGIALSISRAHNNLQEGRLFVSKGELLDA*******************
MDFLFDLNSLGFVPDTFNAMVRGIALSISRAHNNLQEGRLFVSKGELLDANINRSPTAYLQNP******
MDFLFDLNSLGFVPDTFNAMVRGIALSISRAHNNLQEGRLFVSKGELLDANINRSPTAYL*********
MDFLFDLNSLGFVPDTFNAMVRGIALSISRAHNNLQEGRLFVSKGELLDANINRSPTAYLQNPEE****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhii
ooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MDFLFDLNSLGFVPDTFNAMVRGIALSISRAHNNLQEGRLFVSKGELLDANINRSPTAYLQNPEEERMR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query69 2.2.26 [Sep-21-2011]
Q29C43 704 Neutral ceramidase OS=Dro yes N/A 1.0 0.098 0.565 1e-17
Q0JL46 785 Neutral ceramidase OS=Ory yes N/A 0.956 0.084 0.560 8e-16
Q9VA70 704 Neutral ceramidase OS=Dro yes N/A 1.0 0.098 0.521 9e-16
Q5W7F1 743 Neutral ceramidase OS=Dan yes N/A 0.956 0.088 0.5 4e-14
Q304B9 757 Neutral ceramidase OS=Ara no N/A 0.913 0.083 0.523 4e-13
P0C7U2 622 Putative neutral ceramida yes N/A 0.956 0.106 0.484 7e-12
Q9NR71 780 Neutral ceramidase OS=Hom yes N/A 0.956 0.084 0.484 9e-12
Q9JHE3 756 Neutral ceramidase OS=Mus yes N/A 0.956 0.087 0.484 1e-11
Q91XT9 761 Neutral ceramidase OS=Rat yes N/A 0.956 0.086 0.484 2e-11
Q54BK2 714 Neutral ceramidase A OS=D yes N/A 0.927 0.089 0.437 7e-11
>sp|Q29C43|NCASE_DROPS Neutral ceramidase OS=Drosophila pseudoobscura pseudoobscura GN=CDase PE=3 SV=1 Back     alignment and function desciption
 Score = 88.6 bits (218), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/69 (56%), Positives = 53/69 (76%)

Query: 1   MDFLFDLNSLGFVPDTFNAMVRGIALSISRAHNNLQEGRLFVSKGELLDANINRSPTAYL 60
           M  L+D++ LGFVP TF  M +G+ L I RA +NL +GR+F+SK  +L+ NINRSPT+YL
Sbjct: 126 MHLLYDISILGFVPQTFEVMAQGLYLCIKRATDNLVDGRIFLSKTTVLNVNINRSPTSYL 185

Query: 61  QNPEEERMR 69
           +NPEEER +
Sbjct: 186 RNPEEERAQ 194




Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid at an optimal pH of 6.5-7.5. Acts as a key regulator of sphingolipid signaling metabolites by generating sphingosine at the cell surface.
Drosophila pseudoobscura pseudoobscura (taxid: 46245)
EC: 3EC: .EC: 5EC: .EC: 1EC: .EC: 2EC: 3
>sp|Q0JL46|NCASE_ORYSJ Neutral ceramidase OS=Oryza sativa subsp. japonica GN=Os01g0624000 PE=1 SV=1 Back     alignment and function description
>sp|Q9VA70|NCASE_DROME Neutral ceramidase OS=Drosophila melanogaster GN=CDase PE=1 SV=1 Back     alignment and function description
>sp|Q5W7F1|ASAH2_DANRE Neutral ceramidase OS=Danio rerio GN=asah2 PE=1 SV=1 Back     alignment and function description
>sp|Q304B9|NCASE_ARATH Neutral ceramidase OS=Arabidopsis thaliana GN=At2g38010 PE=2 SV=1 Back     alignment and function description
>sp|P0C7U2|ASA2C_HUMAN Putative neutral ceramidase C OS=Homo sapiens GN=ASAH2C PE=2 SV=1 Back     alignment and function description
>sp|Q9NR71|ASAH2_HUMAN Neutral ceramidase OS=Homo sapiens GN=ASAH2 PE=1 SV=2 Back     alignment and function description
>sp|Q9JHE3|ASAH2_MOUSE Neutral ceramidase OS=Mus musculus GN=Asah2 PE=1 SV=1 Back     alignment and function description
>sp|Q91XT9|ASAH2_RAT Neutral ceramidase OS=Rattus norvegicus GN=Asah2 PE=1 SV=1 Back     alignment and function description
>sp|Q54BK2|NCSEA_DICDI Neutral ceramidase A OS=Dictyostelium discoideum GN=dcd2A PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query69
157114987 703 ceramidase [Aedes aegypti] gi|108877087| 0.985 0.096 0.661 2e-20
118779266 709 AGAP000973-PA [Anopheles gambiae str. PE 1.0 0.097 0.666 5e-20
345481481 662 PREDICTED: neutral ceramidase-like isofo 0.971 0.101 0.611 3e-18
345481479 713 PREDICTED: neutral ceramidase-like isofo 0.971 0.093 0.611 3e-18
312383415 693 hypothetical protein AND_03466 [Anophele 1.0 0.099 0.637 4e-18
189241573 696 PREDICTED: similar to ceramidase [Tribol 1.0 0.099 0.565 8e-18
170039952 707 ceramidase [Culex quinquefasciatus] gi|1 1.0 0.097 0.594 3e-17
357603607 725 putative ceramidase [Danaus plexippus] 1.0 0.095 0.594 3e-17
170064964 750 neutral ceramidase [Culex quinquefasciat 1.0 0.092 0.579 5e-17
302816187 713 hypothetical protein SELMODRAFT_130277 [ 0.971 0.093 0.597 1e-16
>gi|157114987|ref|XP_001658092.1| ceramidase [Aedes aegypti] gi|108877087|gb|EAT41312.1| AAEL007028-PA [Aedes aegypti] Back     alignment and taxonomy information
 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 45/68 (66%), Positives = 56/68 (82%)

Query: 1   MDFLFDLNSLGFVPDTFNAMVRGIALSISRAHNNLQEGRLFVSKGELLDANINRSPTAYL 60
           M FL+D+ SLGFVP  FNA+V GI LSI RAH N+QEGR++V++ E+ DANINRSP+AY 
Sbjct: 131 MSFLYDIASLGFVPQNFNALVEGITLSIVRAHENMQEGRVYVAETEVADANINRSPSAYE 190

Query: 61  QNPEEERM 68
            NP+EERM
Sbjct: 191 NNPKEERM 198




Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|118779266|ref|XP_309165.3| AGAP000973-PA [Anopheles gambiae str. PEST] gi|116131849|gb|EAA04917.3| AGAP000973-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|345481481|ref|XP_003424378.1| PREDICTED: neutral ceramidase-like isoform 2 [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|345481479|ref|XP_001606211.2| PREDICTED: neutral ceramidase-like isoform 1 [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|312383415|gb|EFR28513.1| hypothetical protein AND_03466 [Anopheles darlingi] Back     alignment and taxonomy information
>gi|189241573|ref|XP_968874.2| PREDICTED: similar to ceramidase [Tribolium castaneum] gi|270000906|gb|EEZ97353.1| hypothetical protein TcasGA2_TC011170 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|170039952|ref|XP_001847780.1| ceramidase [Culex quinquefasciatus] gi|167863560|gb|EDS26943.1| ceramidase [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|357603607|gb|EHJ63845.1| putative ceramidase [Danaus plexippus] Back     alignment and taxonomy information
>gi|170064964|ref|XP_001867745.1| neutral ceramidase [Culex quinquefasciatus] gi|167882148|gb|EDS45531.1| neutral ceramidase [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|302816187|ref|XP_002989773.1| hypothetical protein SELMODRAFT_130277 [Selaginella moellendorffii] gi|300142550|gb|EFJ09250.1| hypothetical protein SELMODRAFT_130277 [Selaginella moellendorffii] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query69
FB|FBgn0039774 704 CDase "Ceramidase" [Drosophila 0.971 0.095 0.537 4.4e-14
TAIR|locus:2154598 733 AT5G58980 [Arabidopsis thalian 0.956 0.090 0.560 4.7e-14
TAIR|locus:2025042 779 AT1G07380 [Arabidopsis thalian 0.956 0.084 0.530 2.9e-13
ZFIN|ZDB-GENE-041112-1 743 asah2 "N-acylsphingosine amido 0.956 0.088 0.5 9.3e-13
TAIR|locus:2065685 792 AT2G38010 [Arabidopsis thalian 0.913 0.079 0.523 5.7e-12
UNIPROTKB|E2QVL9 782 ASAH2 "Uncharacterized protein 0.956 0.084 0.515 3.2e-11
UNIPROTKB|F1NN67 779 ASAH2 "Uncharacterized protein 0.956 0.084 0.484 6.6e-11
UNIPROTKB|P0C7U2 622 ASAH2C "Putative neutral ceram 0.956 0.106 0.484 1.3e-10
UNIPROTKB|Q9NR71 780 ASAH2 "Neutral ceramidase" [Ho 0.956 0.084 0.484 1.8e-10
UNIPROTKB|E1BJU5 756 ASAH2 "Uncharacterized protein 0.942 0.085 0.492 2.2e-10
FB|FBgn0039774 CDase "Ceramidase" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 192 (72.6 bits), Expect = 4.4e-14, P = 4.4e-14
 Identities = 36/67 (53%), Positives = 50/67 (74%)

Query:     1 MDFLFDLNSLGFVPDTFNAMVRGIALSISRAHNNLQEGRLFVSKGELLDANINRSPTAYL 60
             M  L+D++ LGFVP TF  M +G+ L I RA +NL +GR+ +SK  +L+ NINRSP++YL
Sbjct:   126 MHLLYDISILGFVPQTFEVMAQGLYLCIKRATDNLVDGRILLSKTTVLNVNINRSPSSYL 185

Query:    61 QNPEEER 67
             +NP EER
Sbjct:   186 RNPAEER 192




GO:0005576 "extracellular region" evidence=IDA
GO:0046514 "ceramide catabolic process" evidence=IDA
GO:0006665 "sphingolipid metabolic process" evidence=IDA
GO:0017040 "ceramidase activity" evidence=IMP;NAS;IDA
GO:0031629 "synaptic vesicle fusion to presynaptic membrane" evidence=IMP
GO:0035187 "hatching behavior" evidence=IMP
GO:0007268 "synaptic transmission" evidence=IMP
GO:0016079 "synaptic vesicle exocytosis" evidence=IMP
GO:0005737 "cytoplasm" evidence=IDA
GO:0045494 "photoreceptor cell maintenance" evidence=IMP
TAIR|locus:2154598 AT5G58980 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2025042 AT1G07380 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-041112-1 asah2 "N-acylsphingosine amidohydrolase 2" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
TAIR|locus:2065685 AT2G38010 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|E2QVL9 ASAH2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1NN67 ASAH2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|P0C7U2 ASAH2C "Putative neutral ceramidase C" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q9NR71 ASAH2 "Neutral ceramidase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E1BJU5 ASAH2 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q0JL46NCASE_ORYSJ3, ., 5, ., 1, ., 2, 30.56060.95650.0840yesN/A
Q9VA70NCASE_DROME3, ., 5, ., 1, ., 2, 30.52171.00.0980yesN/A
Q9I596NCASE_PSEAE3, ., 5, ., 1, ., 2, 30.52450.88400.0910yesN/A
Q29C43NCASE_DROPS3, ., 5, ., 1, ., 2, 30.56521.00.0980yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query69
pfam04734 672 pfam04734, Ceramidase_alk, Neutral/alkaline non-ly 4e-35
PTZ00487 715 PTZ00487, PTZ00487, ceramidase; Provisional 2e-19
>gnl|CDD|218235 pfam04734, Ceramidase_alk, Neutral/alkaline non-lysosomal ceramidase Back     alignment and domain information
 Score =  124 bits (313), Expect = 4e-35
 Identities = 45/69 (65%), Positives = 51/69 (73%)

Query: 1   MDFLFDLNSLGFVPDTFNAMVRGIALSISRAHNNLQEGRLFVSKGELLDANINRSPTAYL 60
              L+ + SLGF   +F A+V GI LSI RAH +LQ GRL V KGELLDANINRSP+AYL
Sbjct: 104 HYLLYQITSLGFDKQSFQAIVDGIVLSIVRAHESLQPGRLSVGKGELLDANINRSPSAYL 163

Query: 61  QNPEEERMR 69
            NPEEER R
Sbjct: 164 ANPEEERAR 172


This family represents a group of neutral/alkaline ceramidases found in both bacteria and eukaryotes. Length = 672

>gnl|CDD|240437 PTZ00487, PTZ00487, ceramidase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 69
KOG2232|consensus 734 99.96
PTZ00487 715 ceramidase; Provisional 99.84
PF04734 674 Ceramidase_alk: Neutral/alkaline non-lysosomal cer 99.82
>KOG2232|consensus Back     alignment and domain information
Probab=99.96  E-value=2.2e-29  Score=198.52  Aligned_cols=69  Identities=54%  Similarity=0.904  Sum_probs=67.9

Q ss_pred             CccccccccCCccchhHHHHHHHHHHHHHHHHhcccCceEEeeeeeecCCccCCChHHHhcCCHHHhcC
Q psy10784          1 MDFLFDLNSLGFVPDTFNAMVRGIALSISRAHNNLQEGRLFVSKGELLDANINRSPTAYLQNPEEERMR   69 (69)
Q Consensus         1 ~~~ly~its~Gf~~~~f~aiV~GIv~aI~~Ah~~l~pg~i~~~~g~l~~a~iNRSp~AY~~NP~~Era~   69 (69)
                      ||++|.+|++||++|+||++|+||.+||++||+||+||+|++++|+|+|++|||||++|++||++||++
T Consensus       133 qy~~y~vtslGFv~QsF~~mv~Gi~~sI~qAhenlrpG~iflnkg~llda~vNRSPssYL~NPa~ERsk  201 (734)
T KOG2232|consen  133 QYVLYIVTSLGFVRQSFDVMVDGIEQSIIQAHENLRPGSIFLNKGELLDAGVNRSPSSYLNNPAEERSK  201 (734)
T ss_pred             eeeeeeehhcccchHHHHHHHHHHHHHHHHHHhcCCCCeEEecccceecccccCChhHHhcChHhhhhc
Confidence            799999999999999999999999999999999999999999999999999999999999999999985



>PTZ00487 ceramidase; Provisional Back     alignment and domain information
>PF04734 Ceramidase_alk: Neutral/alkaline non-lysosomal ceramidase; InterPro: IPR006823 This family represents a group of neutral/alkaline ceramidases found in both bacteria and eukaryotes [, , ] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query69
2zxc_A 646 Seramidase Complexed With C2 Length = 646 3e-11
>pdb|2ZXC|A Chain A, Seramidase Complexed With C2 Length = 646 Back     alignment and structure

Iteration: 1

Score = 63.5 bits (153), Expect = 3e-11, Method: Composition-based stats. Identities = 31/61 (50%), Positives = 42/61 (68%) Query: 4 LFDLNSLGFVPDTFNAMVRGIALSISRAHNNLQEGRLFVSKGELLDANINRSPTAYLQNP 63 +++L+ LGF TFNA+V GI SI RA LQ GRLF GEL +A+ NRS ++L+NP Sbjct: 110 MYNLSVLGFQEKTFNAIVDGIVRSIERAQARLQPGRLFYGSGELRNASRNRSLLSHLKNP 169 Query: 64 E 64 + Sbjct: 170 D 170

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query69
2zws_A 646 Neutral ceramidase; prism fold and beta-sandwich f 5e-18
>2zws_A Neutral ceramidase; prism fold and beta-sandwich fold, hydrolase, lipid metaboli secreted; HET: PLM; 1.40A {Pseudomonas aeruginosa} PDB: 2zxc_A* Length = 646 Back     alignment and structure
 Score = 74.9 bits (183), Expect = 5e-18
 Identities = 31/67 (46%), Positives = 42/67 (62%)

Query: 2   DFLFDLNSLGFVPDTFNAMVRGIALSISRAHNNLQEGRLFVSKGELLDANINRSPTAYLQ 61
             +++L+ LGF   TFNA+V GI  SI RA   LQ GRLF   GEL +A+ NRS  ++L+
Sbjct: 108 YAMYNLSVLGFQEKTFNAIVDGIVRSIERAQARLQPGRLFYGSGELRNASRNRSLLSHLK 167

Query: 62  NPEEERM 68
           NP+    
Sbjct: 168 NPDIAGY 174


Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query69
2zws_A 646 Neutral ceramidase; prism fold and beta-sandwich f 99.81
>2zws_A Neutral ceramidase; prism fold and beta-sandwich fold, hydrolase, lipid metaboli secreted; HET: PLM; 1.40A {Pseudomonas aeruginosa} PDB: 2zxc_A* Back     alignment and structure
Probab=99.81  E-value=1e-20  Score=148.25  Aligned_cols=67  Identities=46%  Similarity=0.660  Sum_probs=64.1

Q ss_pred             CccccccccCCccchhHHHHHHHHHHHHHHHHhcccCceEEeeeeeecCCccCCChHHHhcCCHHHhcC
Q psy10784          1 MDFLFDLNSLGFVPDTFNAMVRGIALSISRAHNNLQEGRLFVSKGELLDANINRSPTAYLQNPEEERMR   69 (69)
Q Consensus         1 ~~~ly~its~Gf~~~~f~aiV~GIv~aI~~Ah~~l~pg~i~~~~g~l~~a~iNRSp~AY~~NP~~Era~   69 (69)
                      +|.||+++++||++++|++||+||++||++||++|+||+|.+++|++.++++|||+.||++||  ||++
T Consensus       107 ~~~l~~~~~~g~~~~y~~~lv~~iv~AI~~A~~~l~pa~l~~g~g~~~~~~~NRs~~ay~~NP--er~~  173 (646)
T 2zws_A          107 HYAMYNLSVLGFQEKTFNAIVDGIVRSIERAQARLQPGRLFYGSGELRNASRNRSLLSHLKNP--DIAG  173 (646)
T ss_dssp             SSHHHHGGGTBCCHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSEEESCHHHHTTCS--CCTT
T ss_pred             cccccccccccccHHHHHHHHHHHHHHHHHHHhcCCcEEEEEEEEEeCcceecCChhhhhcCc--cccc
Confidence            478999999999999999999999999999999999999999999999999999999999999  6753




Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00