Psyllid ID: psy10788

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------23
Protein Sequence
MFRSRSWFGGGMWKPKNPHSLETLKYLYNVLSKNQTVSESNRGLLVESLRSIAEILIWGDQNDSSVFDFFLEKNMLSFFLNILKQRCGSYVCVQLLQTLNILFENIRNETSLYYLLSNNHVNSIIVHKFDFSDEEVMAYYISFLKTLSLKLNSHTIHFFYNELRGTELTQSILAPATDSASDKPSYNSSLVDKLIDIVTLSCQPGCRVRLVTLEVTILLLKKLVVRDQT
Secondary Structure (PSIPRED)
ccccccccccccccccccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHcccccEEHHHHHHHHHHHHHccccccEEEEEccHHHHHHHccccccccHHHHHHHHHHHHHHHHccccccEEEEEEccccccccccccccccHHHHccccccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccccEHHHHHHHHHHHHHHcccccEEHEEEccccccHEEEEccccccHHHHHHHHHHHHHHHHHcccccEEEEEEccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
mfrsrswfgggmwkpknphslETLKYLYNVLSknqtvsesnRGLLVESLRSIAEILIwgdqndssVFDFFLEKNMLSFFLNILKQRCGSYVCVQLLQTLNILFENIRNETSLYYLLSNNHVNSIivhkfdfsdEEVMAYYISFLKTLSLKLNSHTIHFFynelrgteltqsilapatdsasdkpsynsslvdKLIDIVTlscqpgcrvrLVTLEVTILLLKKLVVRDQT
Flexible Loop (DISEMBL)
mfrsrswfgggmwkpknphSLETLKYLYNVLSKNQTVSESNRGLLVESLRSIAEILIWGDQNDSSVFDFFLEKNMLSFFLNILKQRCGSYVCVQLLQTLNILFENIRNETSLYYLLSNNHVNSIIVHKFDFSDEEVMAYYISFLKTLSLKLNSHTIHFFYNELRGTELTQSILAPatdsasdkpsynSSLVDKLIDIVTLSCQPGCRVRLVTLEVTIlllkklvvrdqt
Low Complexity Region (SEG)
MFRSRSWFGGGMWKPKNPHSLETLKYLYNVLSKNQTVSESNRGLLVESLRSIAEILIWGDQNDSSVFDFFLEKNMLSFFLNILKQRCGSYVCVQLLQTLNILFENIRNETSLYYLLSNNHVNSIIVHKFDFSDEEVMAYYISFLKTLSLKLNSHTIHFFYNELRGTELTQSILAPATDSASDKPSYNSSLVDKLIDIVTLSCQPGCRVRLVTLEVTILLLKKLVVRDQT
Disordered region (IsUnstruct)
******WFGGGMWKPKNPHSLETLKYLYNVLSKNQTVSESNRGLLVESLRSIAEILIWGDQNDSSVFDFFLEKNMLSFFLNILKQRCGSYVCVQLLQTLNILFENIRNETSLYYLLSNNHVNSIIVHKFDFSDEEVMAYYISFLKTLSLKLNSHTIHFFYNELRGTELTQSIL***************SLVDKLIDIVTLSCQPGCRVRLVTLEVTILLLKKLVV****
Disordered Region (DISOPRED)
****************NPHSLETLKYLYNVLSKNQTVSESNRGLLVESLRSIAEILIWGDQNDSSVFDFFLEKNMLSFFLNILKQRCGSYVCVQLLQTLNILFENIRNETSLYYLLSNNHVNSIIVHKFDFSDEEVMAYYISFLKTLSLKLNSHTIHFFYNELRGTELTQSILAPATDSASDKPSYNSSLVDKLIDIVTLSCQPGCRVRLVTLEVTILLLKKLVVR***
Disordered Region (DISEMBL)
********GGGMWKPKNPHSLETLKYLYNVLSKNQTVSESNRGLLVESLRSIAEILIWGDQNDSSVFDFFLEKNMLSFFLNILKQRCGSYVCVQLLQTLNILFENIRNETSLYYLLSNNHVNSIIVHKFDFSDEEVMAYYISFLKTLSLKLNSHTIHFFYNELRGTELTQSILAP***********NSSLVDKLIDIVTLSCQPGCRVRLVTLEVTILLLKKLVVRDQT
Disordered Region (DISPRO)
***************KNPHSLETLKYLYNVLSKNQTVSESNRGLLVESLRSIAEILIWGDQNDSSVFDFFLEKNMLSFFLNILKQRCGSYVCVQLLQTLNILFENIRNETSLYYLLSNNHVNSIIVHKFDFSDEEVMAYYISFLKTLSLKLNSHTIHFFYNELRGTELTQSILAPATDSASDKPSYNSSLVDKLIDIVTLSCQPGCRVRLVTLEVTILLLKKLVVRD**
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MFRSRSWFGGGMWKPKNPHSLETLKYLYNVLSKNQTVSESNRGLLVESLRSIAEILIWGDQNDSSVFDFFLEKNMLSFFLNILKQRCGSYVCVQLLQTLNILFENIRNETSLYYLLSNNHVNSIIVHKFDFSDEEVMAYYISFLKTLSLKLNSHTIHFFYNELRGTELTQSILAPATDSASDKPSYNSSLVDKLIDIVTLSCQPGCRVRLVTLEVTILLLKKLVVRDQT
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	229	2.2.26 [Sep-21-2011]
Q2KHT3	1053	Protein CLEC16A OS=Homo s	yes	N/A	0.707	0.153	0.810	1e-72
Q80U30	1036	Protein CLEC16A OS=Mus mu	yes	N/A	0.707	0.156	0.810	3e-72
P46578	892	Uncharacterized protein g	yes	N/A	0.698	0.179	0.703	7e-61
Q54GS1	1550	Protein CLEC16A homolog O	yes	N/A	0.663	0.098	0.578	2e-44

>sp|Q2KHT3|CL16A_HUMAN Protein CLEC16A OS=Homo sapiens GN=CLEC16A PE=2 SV=2

 Score =  272 bits (696), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 133/164 (81%), Positives = 147/164 (89%), Gaps = 2/164 (1%)

Query: 1   MF-RSRSWFGGGMWK-PKNPHSLETLKYLYNVLSKNQTVSESNRGLLVESLRSIAEILIW 58
           MF RSRSW GGG  K  +N HSL+ LKYLY+VL+KN TV+E NR LLVE++RSI EILIW
Sbjct: 1   MFGRSRSWVGGGHGKTSRNIHSLDHLKYLYHVLTKNTTVTEQNRNLLVETIRSITEILIW 60

Query: 59  GDQNDSSVFDFFLEKNMLSFFLNILKQRCGSYVCVQLLQTLNILFENIRNETSLYYLLSN 118
           GDQNDSSVFDFFLEKNM  FFLNIL+Q+ G YVCVQLLQTLNILFENI +ETSLYYLLSN
Sbjct: 61  GDQNDSSVFDFFLEKNMFVFFLNILRQKSGRYVCVQLLQTLNILFENISHETSLYYLLSN 120

Query: 119 NHVNSIIVHKFDFSDEEVMAYYISFLKTLSLKLNSHTIHFFYNE 162
           N+VNSIIVHKFDFSDEE+MAYYISFLKTLSLKLN+HT+HFFYNE
Sbjct: 121 NYVNSIIVHKFDFSDEEIMAYYISFLKTLSLKLNNHTVHFFYNE 164

Homo sapiens (taxid: 9606)

>sp|Q80U30|CL16A_MOUSE Protein CLEC16A OS=Mus musculus GN=Clec16a PE=2 SV=2

 Score =  271 bits (693), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 133/164 (81%), Positives = 147/164 (89%), Gaps = 2/164 (1%)

Query: 1   MF-RSRSWFGGGMWKP-KNPHSLETLKYLYNVLSKNQTVSESNRGLLVESLRSIAEILIW 58
           MF RSRSW GGG  K  +N HSL+ LKYLY+VL+KN TV+E NR LLVE++RSI EILIW
Sbjct: 1   MFGRSRSWVGGGHSKSSRNIHSLDHLKYLYHVLTKNTTVTEQNRNLLVETIRSITEILIW 60

Query: 59  GDQNDSSVFDFFLEKNMLSFFLNILKQRCGSYVCVQLLQTLNILFENIRNETSLYYLLSN 118
           GDQNDSSVFDFFLEKNM  FFLNIL+Q+ G YVCVQLLQTLNILFENI +ETSLYYLLSN
Sbjct: 61  GDQNDSSVFDFFLEKNMFVFFLNILRQKSGRYVCVQLLQTLNILFENISHETSLYYLLSN 120

Query: 119 NHVNSIIVHKFDFSDEEVMAYYISFLKTLSLKLNSHTIHFFYNE 162
           N+VNSIIVHKFDFSDEE+MAYYISFLKTLSLKLN+HT+HFFYNE
Sbjct: 121 NYVNSIIVHKFDFSDEEIMAYYISFLKTLSLKLNNHTVHFFYNE 164

Mus musculus (taxid: 10090)

>sp|P46578|GOP1_CAEEL Uncharacterized protein gop-1 OS=Caenorhabditis elegans GN=gop-1 PE=2 SV=1

 Score =  233 bits (595), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 114/162 (70%), Positives = 137/162 (84%), Gaps = 2/162 (1%)

Query: 1   MFRSRSWFGGGMWKPKNPHSLETLKYLYNVLSKNQTVSESNRGLLVESLRSIAEILIWGD 60
           MFR +    G +WKPKNPHSLE LKYL  VL+KN+ V+E+N+ +LVE+LR+IAEILIWGD
Sbjct: 1   MFR-KLGSSGSLWKPKNPHSLEYLKYLQGVLTKNEKVTENNKKILVEALRAIAEILIWGD 59

Query: 61  QNDSSVFDFFLEKNMLSFFLNILKQRCGSYVCVQLLQTLNILFENIRNETSLYYLLSNNH 120
           QND+SVFDFFLE+ ML +FL I++Q   + + VQLLQTLNILFENIR+ETSLY+LLSNNH
Sbjct: 60  QNDASVFDFFLERQMLLYFLKIMEQ-GNTPLNVQLLQTLNILFENIRHETSLYFLLSNNH 118

Query: 121 VNSIIVHKFDFSDEEVMAYYISFLKTLSLKLNSHTIHFFYNE 162
           VNSII HKFD  ++E+MAYYISFLKTLS KLN  TIHFF+NE
Sbjct: 119 VNSIISHKFDLQNDEIMAYYISFLKTLSFKLNPATIHFFFNE 160

Caenorhabditis elegans (taxid: 6239)

>sp|Q54GS1|CL16A_DICDI Protein CLEC16A homolog OS=Dictyostelium discoideum GN=DDB_G0289943 PE=3 SV=1

 Score =  179 bits (453), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 88/152 (57%), Positives = 120/152 (78%)

Query: 13  WKPKNPHSLETLKYLYNVLSKNQTVSESNRGLLVESLRSIAEILIWGDQNDSSVFDFFLE 72
            KPKN  S+E L+YL+N L KNQ ++  N+ L+VESLR IAE++IWGDQ+D+  FDFFLE
Sbjct: 8   MKPKNKFSIENLRYLHNTLKKNQIITAQNKNLIVESLRQIAEVMIWGDQHDNLFFDFFLE 67

Query: 73  KNMLSFFLNILKQRCGSYVCVQLLQTLNILFENIRNETSLYYLLSNNHVNSIIVHKFDFS 132
           KN++ FF+  L Q+  + V +QLLQTL+IL EN+RNE S+Y+LLSNN++N II+HKFDFS
Sbjct: 68  KNIMGFFIQFLAQKTSTEVTIQLLQTLSILVENLRNENSIYFLLSNNYINEIIIHKFDFS 127

Query: 133 DEEVMAYYISFLKTLSLKLNSHTIHFFYNELR 164
            EEV+ Y++S LK LSLKL+  T++FF+N + 
Sbjct: 128 SEEVLDYFVSLLKALSLKLDKSTVNFFFNHVE 159

Dictyostelium discoideum (taxid: 44689)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	229
383865651	1003	PREDICTED: protein CLEC16A [Megachile ro	0.698	0.159	0.950	4e-88
307201532	1074	Protein CLEC16A [Harpegnathos saltator]	0.593	0.126	0.944	7e-88
307169338	1570	Protein CLEC16A [Camponotus floridanus]	0.707	0.103	0.944	9e-88
345487044	882	PREDICTED: LOW QUALITY PROTEIN: protein	0.707	0.183	0.950	9e-88
350398306	1007	PREDICTED: protein CLEC16A-like [Bombus	0.707	0.160	0.944	2e-87
340724999	1007	PREDICTED: protein CLEC16A-like [Bombus	0.707	0.160	0.944	2e-87
66523953	1005	PREDICTED: protein CLEC16A-like [Apis me	0.707	0.161	0.944	2e-87
380021058	1005	PREDICTED: protein CLEC16A [Apis florea]	0.707	0.161	0.944	3e-87
332029106	1008	Protein CLEC16A [Acromyrmex echinatior]	0.707	0.160	0.944	3e-87
270011483	968	hypothetical protein TcasGA2_TC005512 [T	0.707	0.167	0.908	5e-82

>gi|383865651|ref|XP_003708286.1| PREDICTED: protein CLEC16A [Megachile rotundata]

 Score =  329 bits (844), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 154/162 (95%), Positives = 160/162 (98%)

Query: 1   MFRSRSWFGGGMWKPKNPHSLETLKYLYNVLSKNQTVSESNRGLLVESLRSIAEILIWGD 60
           MFRSRSWFGGG+WKPKNPHSLE LKYLYNVLSKNQTVSE+NRGLLVE+LRSIAEILIWGD
Sbjct: 1   MFRSRSWFGGGLWKPKNPHSLEHLKYLYNVLSKNQTVSENNRGLLVETLRSIAEILIWGD 60

Query: 61  QNDSSVFDFFLEKNMLSFFLNILKQRCGSYVCVQLLQTLNILFENIRNETSLYYLLSNNH 120
           QNDSSVFDFFLEKNMLSFFL I+KQ+CGSYVCVQLLQTLNILFENIRNETSLYYLLSNNH
Sbjct: 61  QNDSSVFDFFLEKNMLSFFLRIMKQKCGSYVCVQLLQTLNILFENIRNETSLYYLLSNNH 120

Query: 121 VNSIIVHKFDFSDEEVMAYYISFLKTLSLKLNSHTIHFFYNE 162
           VNSIIVHKFDFSDEEVMAYYISFLKTLSLKLN+HTIHFFYNE
Sbjct: 121 VNSIIVHKFDFSDEEVMAYYISFLKTLSLKLNAHTIHFFYNE 162

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307201532|gb|EFN81295.1| Protein CLEC16A [Harpegnathos saltator]

 Score =  329 bits (843), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 153/162 (94%), Positives = 158/162 (97%)

Query: 1   MFRSRSWFGGGMWKPKNPHSLETLKYLYNVLSKNQTVSESNRGLLVESLRSIAEILIWGD 60
           MFRSRSWFGGG+WKPKNPHSLE LKYLYNVLSKNQTVSE+NRGLLVE+LRSIAEILIWGD
Sbjct: 1   MFRSRSWFGGGLWKPKNPHSLEHLKYLYNVLSKNQTVSENNRGLLVETLRSIAEILIWGD 60

Query: 61  QNDSSVFDFFLEKNMLSFFLNILKQRCGSYVCVQLLQTLNILFENIRNETSLYYLLSNNH 120
           QNDS VFDFFLEKNMLSFFL I+KQ+CGSYVCVQLLQTLNILFENIRNETSLYYLLSNNH
Sbjct: 61  QNDSGVFDFFLEKNMLSFFLRIMKQKCGSYVCVQLLQTLNILFENIRNETSLYYLLSNNH 120

Query: 121 VNSIIVHKFDFSDEEVMAYYISFLKTLSLKLNSHTIHFFYNE 162
           VNSIIVHKFDFSDEEVMAYYISFLKTLSLKLN HTIHFFYNE
Sbjct: 121 VNSIIVHKFDFSDEEVMAYYISFLKTLSLKLNGHTIHFFYNE 162

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307169338|gb|EFN62059.1| Protein CLEC16A [Camponotus floridanus]

 Score =  328 bits (842), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 153/162 (94%), Positives = 159/162 (98%)

Query: 1   MFRSRSWFGGGMWKPKNPHSLETLKYLYNVLSKNQTVSESNRGLLVESLRSIAEILIWGD 60
           MFRSRSWFGGG+WKPKNPHS E LKYLYNVLSKNQTVSE+NRGLLVE+LRSIAEILIWGD
Sbjct: 1   MFRSRSWFGGGLWKPKNPHSPEHLKYLYNVLSKNQTVSENNRGLLVETLRSIAEILIWGD 60

Query: 61  QNDSSVFDFFLEKNMLSFFLNILKQRCGSYVCVQLLQTLNILFENIRNETSLYYLLSNNH 120
           QNDSSVFDFFLEKNMLSFFL I+KQ+CGSYVCVQLLQTLNILFENIRNETSLYYLLSNNH
Sbjct: 61  QNDSSVFDFFLEKNMLSFFLRIMKQKCGSYVCVQLLQTLNILFENIRNETSLYYLLSNNH 120

Query: 121 VNSIIVHKFDFSDEEVMAYYISFLKTLSLKLNSHTIHFFYNE 162
           VNSIIVHKFDFSDEEVMAYYISFLKTLSLKLN+HTIHFFYNE
Sbjct: 121 VNSIIVHKFDFSDEEVMAYYISFLKTLSLKLNAHTIHFFYNE 162

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345487044|ref|XP_003425612.1| PREDICTED: LOW QUALITY PROTEIN: protein CLEC16A-like [Nasonia vitripennis]

 Score =  328 bits (841), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 154/162 (95%), Positives = 160/162 (98%)

Query: 1   MFRSRSWFGGGMWKPKNPHSLETLKYLYNVLSKNQTVSESNRGLLVESLRSIAEILIWGD 60
           MFRSRSWFGGG+WKPKNPHSLE LKYLYNVLSKNQTVSE+NRGLLVE+LRSIAEILIWGD
Sbjct: 1   MFRSRSWFGGGLWKPKNPHSLEHLKYLYNVLSKNQTVSENNRGLLVETLRSIAEILIWGD 60

Query: 61  QNDSSVFDFFLEKNMLSFFLNILKQRCGSYVCVQLLQTLNILFENIRNETSLYYLLSNNH 120
           QNDSSVFDFFLEKNMLSFFL I+KQ+CGSYVCVQLLQTLNILFENIRNETSLYYLLSNNH
Sbjct: 61  QNDSSVFDFFLEKNMLSFFLRIMKQKCGSYVCVQLLQTLNILFENIRNETSLYYLLSNNH 120

Query: 121 VNSIIVHKFDFSDEEVMAYYISFLKTLSLKLNSHTIHFFYNE 162
           VNSIIVHKFDFSDEEVMAYYISFLKTLSLKLN+HTIHFFYNE
Sbjct: 121 VNSIIVHKFDFSDEEVMAYYISFLKTLSLKLNAHTIHFFYNE 162

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350398306|ref|XP_003485154.1| PREDICTED: protein CLEC16A-like [Bombus impatiens]

 Score =  327 bits (838), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 153/162 (94%), Positives = 160/162 (98%)

Query: 1   MFRSRSWFGGGMWKPKNPHSLETLKYLYNVLSKNQTVSESNRGLLVESLRSIAEILIWGD 60
           MFRSRSWFGGG+WKPKNPHSLE LKYLY+VLSKNQTVSE+NRGLLVE+LRSIAEILIWGD
Sbjct: 1   MFRSRSWFGGGLWKPKNPHSLEHLKYLYHVLSKNQTVSENNRGLLVETLRSIAEILIWGD 60

Query: 61  QNDSSVFDFFLEKNMLSFFLNILKQRCGSYVCVQLLQTLNILFENIRNETSLYYLLSNNH 120
           QNDSSVFDFFLEKNMLSFFL I+KQ+CGSYVCVQLLQTLNILFENIRNETSLYYLLSNNH
Sbjct: 61  QNDSSVFDFFLEKNMLSFFLRIMKQKCGSYVCVQLLQTLNILFENIRNETSLYYLLSNNH 120

Query: 121 VNSIIVHKFDFSDEEVMAYYISFLKTLSLKLNSHTIHFFYNE 162
           VNSIIVHKFDFSDEEVMAYYISFLKTLSLKLN+HTIHFFYNE
Sbjct: 121 VNSIIVHKFDFSDEEVMAYYISFLKTLSLKLNAHTIHFFYNE 162

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340724999|ref|XP_003400863.1| PREDICTED: protein CLEC16A-like [Bombus terrestris]

 Score =  327 bits (838), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 153/162 (94%), Positives = 160/162 (98%)

Query: 1   MFRSRSWFGGGMWKPKNPHSLETLKYLYNVLSKNQTVSESNRGLLVESLRSIAEILIWGD 60
           MFRSRSWFGGG+WKPKNPHSLE LKYLY+VLSKNQTVSE+NRGLLVE+LRSIAEILIWGD
Sbjct: 1   MFRSRSWFGGGLWKPKNPHSLEHLKYLYHVLSKNQTVSENNRGLLVETLRSIAEILIWGD 60

Query: 61  QNDSSVFDFFLEKNMLSFFLNILKQRCGSYVCVQLLQTLNILFENIRNETSLYYLLSNNH 120
           QNDSSVFDFFLEKNMLSFFL I+KQ+CGSYVCVQLLQTLNILFENIRNETSLYYLLSNNH
Sbjct: 61  QNDSSVFDFFLEKNMLSFFLRIMKQKCGSYVCVQLLQTLNILFENIRNETSLYYLLSNNH 120

Query: 121 VNSIIVHKFDFSDEEVMAYYISFLKTLSLKLNSHTIHFFYNE 162
           VNSIIVHKFDFSDEEVMAYYISFLKTLSLKLN+HTIHFFYNE
Sbjct: 121 VNSIIVHKFDFSDEEVMAYYISFLKTLSLKLNAHTIHFFYNE 162

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|66523953|ref|XP_393990.2| PREDICTED: protein CLEC16A-like [Apis mellifera]

 Score =  327 bits (838), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 153/162 (94%), Positives = 160/162 (98%)

Query: 1   MFRSRSWFGGGMWKPKNPHSLETLKYLYNVLSKNQTVSESNRGLLVESLRSIAEILIWGD 60
           MFRSRSWFGGG+WKPKNPHSLE LKYLY+VLSKNQTVSE+NRGLLVE+LRSIAEILIWGD
Sbjct: 1   MFRSRSWFGGGLWKPKNPHSLEHLKYLYHVLSKNQTVSENNRGLLVETLRSIAEILIWGD 60

Query: 61  QNDSSVFDFFLEKNMLSFFLNILKQRCGSYVCVQLLQTLNILFENIRNETSLYYLLSNNH 120
           QNDSSVFDFFLEKNMLSFFL I+KQ+CGSYVCVQLLQTLNILFENIRNETSLYYLLSNNH
Sbjct: 61  QNDSSVFDFFLEKNMLSFFLRIMKQKCGSYVCVQLLQTLNILFENIRNETSLYYLLSNNH 120

Query: 121 VNSIIVHKFDFSDEEVMAYYISFLKTLSLKLNSHTIHFFYNE 162
           VNSIIVHKFDFSDEEVMAYYISFLKTLSLKLN+HTIHFFYNE
Sbjct: 121 VNSIIVHKFDFSDEEVMAYYISFLKTLSLKLNAHTIHFFYNE 162

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380021058|ref|XP_003694391.1| PREDICTED: protein CLEC16A [Apis florea]

 Score =  327 bits (837), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 153/162 (94%), Positives = 160/162 (98%)

Query: 1   MFRSRSWFGGGMWKPKNPHSLETLKYLYNVLSKNQTVSESNRGLLVESLRSIAEILIWGD 60
           MFRSRSWFGGG+WKPKNPHSLE LKYLY+VLSKNQTVSE+NRGLLVE+LRSIAEILIWGD
Sbjct: 1   MFRSRSWFGGGLWKPKNPHSLEHLKYLYHVLSKNQTVSENNRGLLVETLRSIAEILIWGD 60

Query: 61  QNDSSVFDFFLEKNMLSFFLNILKQRCGSYVCVQLLQTLNILFENIRNETSLYYLLSNNH 120
           QNDSSVFDFFLEKNMLSFFL I+KQ+CGSYVCVQLLQTLNILFENIRNETSLYYLLSNNH
Sbjct: 61  QNDSSVFDFFLEKNMLSFFLRIMKQKCGSYVCVQLLQTLNILFENIRNETSLYYLLSNNH 120

Query: 121 VNSIIVHKFDFSDEEVMAYYISFLKTLSLKLNSHTIHFFYNE 162
           VNSIIVHKFDFSDEEVMAYYISFLKTLSLKLN+HTIHFFYNE
Sbjct: 121 VNSIIVHKFDFSDEEVMAYYISFLKTLSLKLNAHTIHFFYNE 162

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332029106|gb|EGI69119.1| Protein CLEC16A [Acromyrmex echinatior]

 Score =  327 bits (837), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 153/162 (94%), Positives = 159/162 (98%)

Query: 1   MFRSRSWFGGGMWKPKNPHSLETLKYLYNVLSKNQTVSESNRGLLVESLRSIAEILIWGD 60
           MFRSRSWFGGG+WKPKNPHS E LKYLYNVLSKNQTVSE+NRGLLVE+LRSIAEILIWGD
Sbjct: 1   MFRSRSWFGGGLWKPKNPHSPEHLKYLYNVLSKNQTVSENNRGLLVETLRSIAEILIWGD 60

Query: 61  QNDSSVFDFFLEKNMLSFFLNILKQRCGSYVCVQLLQTLNILFENIRNETSLYYLLSNNH 120
           QNDSSVFDFFLEKNMLSFFL I+KQ+CGSYVCVQLLQTLNILFENIRNETSLYYLLSNNH
Sbjct: 61  QNDSSVFDFFLEKNMLSFFLRIMKQKCGSYVCVQLLQTLNILFENIRNETSLYYLLSNNH 120

Query: 121 VNSIIVHKFDFSDEEVMAYYISFLKTLSLKLNSHTIHFFYNE 162
           VNSIIVHKFDFSDEEVMAYYISFLKTLSLKLN+HTIHFFYNE
Sbjct: 121 VNSIIVHKFDFSDEEVMAYYISFLKTLSLKLNAHTIHFFYNE 162

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270011483|gb|EFA07931.1| hypothetical protein TcasGA2_TC005512 [Tribolium castaneum]

 Score =  309 bits (792), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 149/164 (90%), Positives = 156/164 (95%), Gaps = 2/164 (1%)

Query: 1   MFRSRSWFGGGMWKPKNPHSLETLKYLYNVLSKNQTVSESNRGLLVESLRSIAEILIWGD 60
           MFRSRSWFGGG  +PKNPHSLE LKYLYNVLS+NQTVSE NRGLLVE+LRSIAEILIWGD
Sbjct: 1   MFRSRSWFGGGWGRPKNPHSLEHLKYLYNVLSRNQTVSEHNRGLLVETLRSIAEILIWGD 60

Query: 61  QNDSSVFDFFLEKNMLSFFLNILKQRCG--SYVCVQLLQTLNILFENIRNETSLYYLLSN 118
           QNDSSVFDFFLEKNMLSFFL I++QR G  S+VCVQLLQTLNILFENIRNETSLYYLLSN
Sbjct: 61  QNDSSVFDFFLEKNMLSFFLRIMRQRSGGSSFVCVQLLQTLNILFENIRNETSLYYLLSN 120

Query: 119 NHVNSIIVHKFDFSDEEVMAYYISFLKTLSLKLNSHTIHFFYNE 162
           NHVNSIIVHKFDFSDEEVMAYYISFLKTLSLKLN+HTIHFFYNE
Sbjct: 121 NHVNSIIVHKFDFSDEEVMAYYISFLKTLSLKLNAHTIHFFYNE 164

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	229
ZFIN|ZDB-GENE-040426-951	1044	clec16a "C-type lectin domain	0.703	0.154	0.809	3e-74
FB|FBgn0038427	1067	ema "endosomal maturation defe	0.703	0.150	0.825	1.3e-67
RGD|1305773	881	Clec16a "C-type lectin domain	0.707	0.183	0.810	4e-67
MGI|MGI:1921624	1036	Clec16a "C-type lectin domain	0.707	0.156	0.810	1.7e-66
DICTYBASE|DDB_G0289943	1550	DDB_G0289943 "armadillo-like h	0.655	0.096	0.586	1.5e-49
TAIR|locus:2088917	837	AT3G28430 "AT3G28430" [Arabido	0.633	0.173	0.483	1.6e-32

ZFIN|ZDB-GENE-040426-951 clec16a "C-type lectin domain family 16, member A" [Danio rerio (taxid:7955)]

 Score = 684 (245.8 bits), Expect = 3.0e-74, Sum P(2) = 3.0e-74
 Identities = 132/163 (80%), Positives = 147/163 (90%)

Query:     1 MF-RSRSWFGGGMWKPKNPHSLETLKYLYNVLSKNQTVSESNRGLLVESLRSIAEILIWG 59
             MF RSRSW GG   K KN HSL+ LKY+Y+VL+KN TV++ NR LLVE++RSI EILIWG
Sbjct:     1 MFGRSRSWVGG-QGKSKNIHSLDHLKYMYHVLTKNTTVTDHNRNLLVETIRSITEILIWG 59

Query:    60 DQNDSSVFDFFLEKNMLSFFLNILKQRCGSYVCVQLLQTLNILFENIRNETSLYYLLSNN 119
             DQNDSSVFDFFLEKNM +FFLNIL+Q+ G YVCVQLLQTLNILFENI +ETSLYYLLSNN
Sbjct:    60 DQNDSSVFDFFLEKNMFAFFLNILRQKSGRYVCVQLLQTLNILFENISHETSLYYLLSNN 119

Query:   120 HVNSIIVHKFDFSDEEVMAYYISFLKTLSLKLNSHTIHFFYNE 162
             HVNSIIVHKFDFSDEE+MAYYISFLKTLSLKLN+HT+HFFYNE
Sbjct:   120 HVNSIIVHKFDFSDEEIMAYYISFLKTLSLKLNNHTVHFFYNE 162

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

FB|FBgn0038427 ema "endosomal maturation defective" [Drosophila melanogaster (taxid:7227)]

 Score = 692 (248.7 bits), Expect = 1.3e-67, P = 1.3e-67
 Identities = 137/166 (82%), Positives = 150/166 (90%)

Query:     1 MFRSRSWFGGGMW--KPKNPHSLETLKYLYNVLSKNQTVSESNRGLLVESLRSIAEILIW 58
             MFRSRSWFGG  W  +PKN  SLE LKYLY++L KN TVSESNRGLLVESLR IAEILIW
Sbjct:     1 MFRSRSWFGGP-WGGRPKNRLSLEHLKYLYSILEKNTTVSESNRGLLVESLRCIAEILIW 59

Query:    59 GDQNDSSVFDFFLEKNMLSFFLNILKQRCG--SYVCVQLLQTLNILFENIRNETSLYYLL 116
             GDQ+DS VFDFFLEKNMLS+FL+I++Q+ G  S+VCVQLLQTLNILFENIRNETSLYYLL
Sbjct:    60 GDQHDSLVFDFFLEKNMLSYFLHIMRQKSGGSSFVCVQLLQTLNILFENIRNETSLYYLL 119

Query:   117 SNNHVNSIIVHKFDFSDEEVMAYYISFLKTLSLKLNSHTIHFFYNE 162
             SNNHVNSI+VHKFDFSDE+VM YYI FLKTLSLKLN+HTIHFFYNE
Sbjct:   120 SNNHVNSIMVHKFDFSDEDVMGYYILFLKTLSLKLNTHTIHFFYNE 165

GO:0008333 "endosome to lysosome transport" evidence=IMP

GO:0016197 "endosomal transport" evidence=IGI

GO:0005770 "late endosome" evidence=IDA

GO:0016021 "integral to membrane" evidence=IDA

RGD|1305773 Clec16a "C-type lectin domain family 16, member A" [Rattus norvegicus (taxid:10116)]

 Score = 682 (245.1 bits), Expect = 4.0e-67, P = 4.0e-67
 Identities = 133/164 (81%), Positives = 147/164 (89%)

Query:     1 MF-RSRSWFGGGMWKP-KNPHSLETLKYLYNVLSKNQTVSESNRGLLVESLRSIAEILIW 58
             MF RSRSW GGG  K  +N HSL+ LKYLY+VL+KN TV+E NR LLVE++RSI EILIW
Sbjct:     1 MFGRSRSWVGGGHGKSSRNIHSLDHLKYLYHVLTKNTTVTEQNRNLLVETIRSITEILIW 60

Query:    59 GDQNDSSVFDFFLEKNMLSFFLNILKQRCGSYVCVQLLQTLNILFENIRNETSLYYLLSN 118
             GDQNDSSVFDFFLEKNM  FFLNIL+Q+ G YVCVQLLQTLNILFENI +ETSLYYLLSN
Sbjct:    61 GDQNDSSVFDFFLEKNMFVFFLNILRQKSGRYVCVQLLQTLNILFENISHETSLYYLLSN 120

Query:   119 NHVNSIIVHKFDFSDEEVMAYYISFLKTLSLKLNSHTIHFFYNE 162
             N+VNSIIVHKFDFSDEE+MAYYISFLKTLSLKLN+HT+HFFYNE
Sbjct:   121 NYVNSIIVHKFDFSDEEIMAYYISFLKTLSLKLNNHTVHFFYNE 164

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

MGI|MGI:1921624 Clec16a "C-type lectin domain family 16, member A" [Mus musculus (taxid:10090)]

 Score = 681 (244.8 bits), Expect = 1.7e-66, P = 1.7e-66
 Identities = 133/164 (81%), Positives = 147/164 (89%)

Query:     1 MF-RSRSWFGGGMWKP-KNPHSLETLKYLYNVLSKNQTVSESNRGLLVESLRSIAEILIW 58
             MF RSRSW GGG  K  +N HSL+ LKYLY+VL+KN TV+E NR LLVE++RSI EILIW
Sbjct:     1 MFGRSRSWVGGGHSKSSRNIHSLDHLKYLYHVLTKNTTVTEQNRNLLVETIRSITEILIW 60

Query:    59 GDQNDSSVFDFFLEKNMLSFFLNILKQRCGSYVCVQLLQTLNILFENIRNETSLYYLLSN 118
             GDQNDSSVFDFFLEKNM  FFLNIL+Q+ G YVCVQLLQTLNILFENI +ETSLYYLLSN
Sbjct:    61 GDQNDSSVFDFFLEKNMFVFFLNILRQKSGRYVCVQLLQTLNILFENISHETSLYYLLSN 120

Query:   119 NHVNSIIVHKFDFSDEEVMAYYISFLKTLSLKLNSHTIHFFYNE 162
             N+VNSIIVHKFDFSDEE+MAYYISFLKTLSLKLN+HT+HFFYNE
Sbjct:   121 NYVNSIIVHKFDFSDEEIMAYYISFLKTLSLKLNNHTVHFFYNE 164

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

DICTYBASE|DDB_G0289943 DDB_G0289943 "armadillo-like helical domain-containing protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 498 (180.4 bits), Expect = 1.5e-49, Sum P(2) = 1.5e-49
 Identities = 88/150 (58%), Positives = 120/150 (80%)

Query:    14 KPKNPHSLETLKYLYNVLSKNQTVSESNRGLLVESLRSIAEILIWGDQNDSSVFDFFLEK 73
             KPKN  S+E L+YL+N L KNQ ++  N+ L+VESLR IAE++IWGDQ+D+  FDFFLEK
Sbjct:     9 KPKNKFSIENLRYLHNTLKKNQIITAQNKNLIVESLRQIAEVMIWGDQHDNLFFDFFLEK 68

Query:    74 NMLSFFLNILKQRCGSYVCVQLLQTLNILFENIRNETSLYYLLSNNHVNSIIVHKFDFSD 133
             N++ FF+  L Q+  + V +QLLQTL+IL EN+RNE S+Y+LLSNN++N II+HKFDFS 
Sbjct:    69 NIMGFFIQFLAQKTSTEVTIQLLQTLSILVENLRNENSIYFLLSNNYINEIIIHKFDFSS 128

Query:   134 EEVMAYYISFLKTLSLKLNSHTIHFFYNEL 163
             EEV+ Y++S LK LSLKL+  T++FF+N +
Sbjct:   129 EEVLDYFVSLLKALSLKLDKSTVNFFFNHV 158

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

TAIR|locus:2088917 AT3G28430 "AT3G28430" [Arabidopsis thaliana (taxid:3702)]

 Score = 365 (133.5 bits), Expect = 1.6e-32, P = 1.6e-32
 Identities = 72/149 (48%), Positives = 108/149 (72%)

Query:    12 MW----KPKNPHSLETLKYLYNVLSKNQTVSESNRGLLVESLRSIAEILIWGDQNDSSVF 67
             MW    +P++  SL  L+YL + L K Q V+E+N+ L++E+LRSIAEIL +GDQ+D   F
Sbjct:     1 MWLSFLRPRDRFSLAELRYLTDQLRKIQIVNEANKDLVIEALRSIAEILTYGDQHDPLFF 60

Query:    68 DFFLEKNMLSFFLNILKQRCGSYVCVQLLQTLNILFENIRNETSLYYLLSNNHVNSIIVH 127
             +FF+EK ++  F+ IL+      V VQLLQT++I+ +N+++E ++YYL SN +VN +I +
Sbjct:    61 EFFMEKQVMGEFVRILRVSKTVTVSVQLLQTMSIMIQNLKSEQAIYYLFSNEYVNYLITY 120

Query:   128 KFDFSDEEVMAYYISFLKTLSLKLNSHTI 156
              FDF  EE+++YYISFL+ +S KLN HTI
Sbjct:   121 TFDFQHEELLSYYISFLRAVSGKLNKHTI 149


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.136   0.395    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      229       229   0.00082  113 3  11 22  0.37    33
                                                     32  0.42    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  599 (64 KB)
  Total size of DFA:  176 KB (2103 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  21.23u 0.11s 21.34t   Elapsed:  00:00:02
  Total cpu time:  21.23u 0.12s 21.35t   Elapsed:  00:00:02
  Start:  Thu Aug 15 15:34:29 2013   End:  Thu Aug 15 15:34:31 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q2KHT3	CL16A_HUMAN	No assigned EC number	0.8109	0.7074	0.1538	yes	N/A
Q54GS1	CL16A_DICDI	No assigned EC number	0.5789	0.6637	0.0980	yes	N/A
P46578	GOP1_CAEEL	No assigned EC number	0.7037	0.6986	0.1793	yes	N/A
Q80U30	CL16A_MOUSE	No assigned EC number	0.8109	0.7074	0.1563	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	229
pfam09758	149	pfam09758, FPL, Uncharacterized conserved protein	8e-55

>gnl|CDD|192367 pfam09758, FPL, Uncharacterized conserved protein

 Score =  172 bits (437), Expect = 8e-55
 Identities = 71/114 (62%), Positives = 94/114 (82%)

Query: 49  LRSIAEILIWGDQNDSSVFDFFLEKNMLSFFLNILKQRCGSYVCVQLLQTLNILFENIRN 108
           LR IAE LIWGD+ND   FD+FLEKN++S FL IL     S V +Q+LQT+++L +N++N
Sbjct: 1   LREIAEYLIWGDKNDDDFFDYFLEKNIMSTFLRILTNLTPSEVKIQILQTVSMLIQNLQN 60

Query: 109 ETSLYYLLSNNHVNSIIVHKFDFSDEEVMAYYISFLKTLSLKLNSHTIHFFYNE 162
           ETSLYYLLSNNH+N +I+HKFDF+DEE+++YYISFLK+LSL+LN  TI  F+N+
Sbjct: 61  ETSLYYLLSNNHLNELIIHKFDFNDEEIVSYYISFLKSLSLRLNKDTIQLFFNQ 114

This entry represents an N-terminal region of approximately 150 residues of a family of proteins of unknown function. It contains a highly conserved FPL motif. Length = 149

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	229
KOG2219|consensus	864		100.0
PF09758	149	FPL: Uncharacterised conserved protein; InterPro:	100.0
PF10257	353	RAI16-like: Retinoic acid induced 16-like protein;	95.66

>KOG2219|consensus

Probab=100.00  E-value=4.5e-76  Score=572.97  Aligned_cols=194  Identities=71%  Similarity=1.054  Sum_probs=190.9

Q ss_pred             CCCcCCCCCCCcCCCCCCCCHHHHHHHHHHhhhhhcccccchhhHHHHHHHHHHHHHhccCCCchHHHHHHHHhHHHHHH
Q psy10788          1 MFRSRSWFGGGMWKPKNPHSLETLKYLYNVLSKNQTVSESNRGLLVESLRSIAEILIWGDQNDSSVFDFFLEKNMLSFFL   80 (229)
Q Consensus         1 ~~~~~~~~~~~~~~~~n~fSle~lryL~~~L~k~~~v~~~n~~~vvE~LR~IaEilIwGDq~d~~~Fd~F~E~n~l~~f~   80 (229)
                      |||+|||+||+ |||||+|||||||||+++|+|+++|+|.|++.+||+||+||||+|||||||+++||||+|||||++|+
T Consensus         1 mfrsrsw~g~l-~~pkn~hSLe~LkYL~~vLtKn~~VtE~Nr~llVEaLRsIaEILiwGDQnDssvFdFFlEkqml~yFl   79 (864)
T KOG2219|consen    1 MFRSRSWSGGL-WKPKNPHSLEHLKYLYGVLTKNTTVTENNRKLLVEALRAIAEILIWGDQNDSSVFDFFLEKQMLGYFL   79 (864)
T ss_pred             CcccccccCCC-CCCCCcccHHHHHHHHHHHhhcceecccchhHHHHHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHH
Confidence            99999999986 89999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhhcCCcchhHHHHHHHHHHHhcCCCcceeeeccchHHHHhhhccCCCCchhHHHHHHHHHHHHhhcccccccceee
Q psy10788         81 NILKQRCGSYVCVQLLQTLNILFENIRNETSLYYLLSNNHVNSIIVHKFDFSDEEVMAYYISFLKTLSLKLNSHTIHFFY  160 (229)
Q Consensus        81 ~il~~~~~~~V~~QlLQtlSILiqNi~~~~sLyYlLSNn~IN~lI~~~~df~deEil~yYISfLK~LSlrLn~~Ti~fFf  160 (229)
                      +||+++.+.+|++|+|||++||||||++||||||||||||+|.||+|+|||+|||+++|||||||++|+|||++||+|||
T Consensus        80 ~Ilrq~st~~v~VQLLQTlnIlfeNirhEtslYyLlSNnyVNsiI~hkFDfq~eEimaYYISFLktlS~KLN~hTihff~  159 (864)
T KOG2219|consen   80 RILRQKSTVTVCVQLLQTLNILFENIRHETSLYYLLSNNYVNSIIVHKFDFQDEEIMAYYISFLKTLSGKLNKHTIHFFL  159 (864)
T ss_pred             HHHhhcCCceEeHHHHHHHHHHHHhccccceeeeeecccceeeeEEEeecCCcHHHHHHHHHHHHHhhcccCcceeEEee
Confidence            99999988999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ecccCCcccccccCCcCcCCCCCCCCchHHHHHHHhHhhhcc
Q psy10788        161 NELRGTELTQSILAPATDSASDKPSYNSSLVDKLIDIVTLSC  202 (229)
Q Consensus       161 n~~~~~el~~~i~~Pa~~~~~~~~~yne~mV~~~~~iitl~c  202 (229)
                      |+++++.       |++..+.+|..++|+|||+|+|+||||+
T Consensus       160 Nd~t~dF-------pLyvE~ikf~nh~EsMVRiAVRtitLNV  194 (864)
T KOG2219|consen  160 NDHTNDF-------PLYVEAIKFFNHPESMVRIAVRTITLNV  194 (864)
T ss_pred             ccccccc-------hhHHHHHHHhcChHHHHHHHHHheeeeE
Confidence            9999975       9999999999999999999999999998

>PF09758 FPL: Uncharacterised conserved protein; InterPro: IPR019155 The proteins in this family are functionally uncharacterised

Probab=100.00  E-value=1.1e-59  Score=392.28  Aligned_cols=148  Identities=61%  Similarity=0.888  Sum_probs=143.6

Q ss_pred             HHHHHHHHHhccCCCchHHHHHHHHhHHHHHHHHHhhhcCCcchhHHHHHHHHHHHhcCCCcceeeeccchHHHHhhhcc
Q psy10788         49 LRSIAEILIWGDQNDSSVFDFFLEKNMLSFFLNILKQRCGSYVCVQLLQTLNILFENIRNETSLYYLLSNNHVNSIIVHK  128 (229)
Q Consensus        49 LR~IaEilIwGDq~d~~~Fd~F~E~n~l~~f~~il~~~~~~~V~~QlLQtlSILiqNi~~~~sLyYlLSNn~IN~lI~~~  128 (229)
                      ||+|||++|||||||+++||||||+|||+.|++|++++.++.|++|+|||+|||+||+++|+|+||||||||||++|+++
T Consensus         1 lr~iaE~~iwGDq~~~~~Fd~F~E~nil~~f~~il~~~~~~~V~~QlLQtlsiLiqNi~~~~slyyllSnn~iN~iI~~~   80 (149)
T PF09758_consen    1 LRSIAEILIWGDQNDPSFFDFFMEKNILSTFVRILKQSRSSSVKLQLLQTLSILIQNIRSETSLYYLLSNNHINEIITYP   80 (149)
T ss_pred             ChhhhhhhhhhccCCcHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHhcCCCcceEEEecchHHHHHHhcC
Confidence            69999999999999999999999999999999999998889999999999999999999999999999999999999999


Q ss_pred             CCCCchhHHHHHHHHHHHHhhcccccccceeeecccCCcccccccCCcCcCCCCCCCCchHHHHHHHhHhhhccc
Q psy10788        129 FDFSDEEVMAYYISFLKTLSLKLNSHTIHFFYNELRGTELTQSILAPATDSASDKPSYNSSLVDKLIDIVTLSCQ  203 (229)
Q Consensus       129 ~df~deEil~yYISfLK~LSlrLn~~Ti~fFfn~~~~~el~~~i~~Pa~~~~~~~~~yne~mV~~~~~iitl~c~  203 (229)
                      |||+|||+++|||||||+||+|||++|++||||+++++.       |+++.|.++..+.|+|||.|+|+|||||.
T Consensus        81 ~d~~~ee~l~yYIsfLK~lSlkln~~tv~fffn~~~~~F-------PL~~~aikf~~h~d~Mvr~avR~i~Lni~  148 (149)
T PF09758_consen   81 FDFSDEEVLSYYISFLKTLSLKLNKDTVQFFFNERNDSF-------PLYTEAIKFYNHPDSMVRTAVRTITLNIY  148 (149)
T ss_pred             CCCCcchhHHHHHHHHHHHHhhcCCCceeEeEecCCCCC-------CcHHHHHHhhcCcchHHHHHHHHHHHhhc
Confidence            999999999999999999999999999999999999854       88899999988899999999999999984

They contain a highly conserved FPL motif.

>PF10257 RAI16-like: Retinoic acid induced 16-like protein; InterPro: IPR019384 This entry represents a conserved sequence region found in a family of proteins described as retinoic acid-induced protein 16-like proteins

Probab=95.66  E-value=0.068  Score=50.02  Aligned_cols=99  Identities=12%  Similarity=0.209  Sum_probs=77.8

Q ss_pred             HHHHHHHhHHHHHHHHHhhhcCCcchhHHHHHHHHHHHhcCCCcceeeeccchHHHHh-hhccCCCC-chhHHHHHHHHH
Q psy10788         67 FDFFLEKNMLSFFLNILKQRCGSYVCVQLLQTLNILFENIRNETSLYYLLSNNHVNSI-IVHKFDFS-DEEVMAYYISFL  144 (229)
Q Consensus        67 Fd~F~E~n~l~~f~~il~~~~~~~V~~QlLQtlSILiqNi~~~~sLyYlLSNn~IN~l-I~~~~df~-deEil~yYISfL  144 (229)
                      -||+++++|+..+.++-+...+..++.++++.++.|+...+.+ -+-+.-=+--+.++ +..--.-. ++++-.-.|.||
T Consensus         2 lEyll~~~Il~~L~~la~~d~p~g~r~~~l~f~~~Ll~~~~~p-lL~h~~v~~pl~~L~l~~c~~~~~~~~~E~~lV~lL   80 (353)
T PF10257_consen    2 LEYLLQHQILETLCTLAKADYPPGMRQEVLKFFSRLLSQSQQP-LLPHRSVHRPLQRLLLRSCGESRSASPTEKELVELL   80 (353)
T ss_pred             hHHHHHhChHHHHHHHHcccCChHHHHHHHHHHHHHHHhcccc-cccchhhhhhHHHHHHHHhCCCCCCchHHHHHHHHH
Confidence            4899999999999999999989999999999999999999998 11122222335566 55444333 888889999999


Q ss_pred             HHHhhcc--cccccceeeecccCC
Q psy10788        145 KTLSLKL--NSHTIHFFYNELRGT  166 (229)
Q Consensus       145 K~LSlrL--n~~Ti~fFfn~~~~~  166 (229)
                      -+|..|+  +++-+.|||..+...
T Consensus        81 ~~lc~~i~~~P~ll~~ff~~~~~~  104 (353)
T PF10257_consen   81 NTLCSKIRKDPSLLNFFFESSPSQ  104 (353)
T ss_pred             HHHHHHHHhCHHHHHHHhcCCccc
Confidence            9999888  455588999887644

These proteins are conserved from worms to humans, but their function is not known.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	229
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.1 bits (98), Expect = 8e-05
 Identities = 37/254 (14%), Positives = 68/254 (26%), Gaps = 82/254 (32%)

Query: 8   FGGGM-W----KPKNPHS-LETLKYLYNVLSKNQTVSESN-------------------- 41
               + W       +P + LE L+ L   +  N T    +                    
Sbjct: 180 MDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLK 239

Query: 42  -----RGLLVESLRSIAEILIWGDQN----------DSSVFDF----------------- 69
                  LLV  L ++     W   N             V DF                 
Sbjct: 240 SKPYENCLLV--LLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMT 297

Query: 70  FLEKNMLSFFLNILKQRCGSY---VCVQLLQTLNILFENIRNETSL--YYLLSN-NHVNS 123
                + S  L  L  R       V     + L+I+ E+IR+  +    +   N + + +
Sbjct: 298 LTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTT 357

Query: 124 IIVHKFD-FSDEEVMAYYIS---FLKTLSLKLNSHTIHFFYNELRGTELTQSILAPATDS 179
           II    +     E    +     F    S  + +  +   + ++        ++      
Sbjct: 358 IIESSLNVLEPAEYRKMFDRLSVFPP--SAHIPTILLSLIWFDVI-KSDVMVVV------ 408

Query: 180 ASDKPSYNSSLVDK 193
                 +  SLV+K
Sbjct: 409 ---NKLHKYSLVEK 419

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00