Psyllid ID: psy10795

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410--
Protein Sequence
MVQIALGTLLQGLNFGTVDKIFIRFPAKWWKDGCQGFNLYWTQQDKTDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLVSGQTPVDLSNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNAIEGLNFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWIAGPTARYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLNTSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVYLRREGFFEKLVNIAVKELEHKGNQVGRILNLFGGGI
Secondary Structure (PSIPRED)
cHHHHHHHHHHccccccccEEEEEEcccccccccccccEEEccccccHHcccccEEccccEEEcccccEEcccccHHHHccccccccccccEEccccEEEEEEcccccEEEEEccccEEEccEEEEEccHHHHHcccccccccccHHHHHHHHccccccccEEEEEccccccccccccEEEEEccccccccccccccccccccEEEEEEEEEccccccEEEEEccccHHHHHHcccHHHHHHHHHHHHHHHHccccccccccEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcccccHHHHHHccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHcccccccccHHHHHHHHHcccccccccccccccccccEEEccccccccccccHHHHHHHHHHccHcccccccccEEEEccEEEEEEEccccEEEEEEccccEEEEcEEEEcccHHHHcccccEEEccccHHHHHHHHHcEEEcEEEEEEEccccccccccccEEEEEccccccccccccccccHHHHHHHHHccccccccccEEEEEEEcHHHHHHccccHHHHHHHHHHHHHHHcccccccccccEEEEEcccccccccccEEEEEccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccEEEEEcccccccccccHHHHHHcHHHHHHHHHHHHHHcccHHHHHEHHHHHHHHccccccEEEEcccccc
Coil and Loop (DISEMBL)
MVQIALGTLlqglnfgtvdkIFIRFpakwwkdgcqgfnlywtqqdktdlfkdmvhvdgkpwvwGILGfymdaedpltllvsgqtpvdlsnkilyKKEVNKIDWeyqngaavscsdgsvytAYKIIITVPLgvlksklitfvpslpaqklnaieglnfgtvdkIFIRFpakwwkdgcqgfnfywtqqdkmdLFKDmvhvdgkpwvwGILGFymdaedpltllgwiagptarymetlPMAVLQADIMRLFRHFlggayiipepirivrsawsinphfrgsyshhgptqhqcrrlgrssyqqrrppraplcrrsyqptslrngsdrlntsaadlaapvinregrpvllfageatsphhygtvngavesGARETANAIVYLRREGFFEKLVNIAVKELEHKGNQVGRILNLFGGGI
Flexible Loop (DISEMBL)
MVQIALGTllqglnfgtVDKIFIRFPAKWWKDGCQGFNLYWTQQDKTDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLVSgqtpvdlsnkILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNAIEGLNFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWIAGPTARYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVRSAWSINPHFrgsyshhgptqhQCRRLGRssyqqrrppraplcrrsyqptslrngsdrlntSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVYLRREGFFEKLVNIAVKelehkgnqvgrilnlfgggi
Low Complexity Region (SEG)
MVQIALGTLLQGLNFGTVDKIFIRFPAKWWKDGCQGFNLYWTQQDKTDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLVSGQTPVDLSNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNAIEGLNFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWIAGPTARYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLNTSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVYLRREGFFEKLVNIAVKELEHKGNQVGRILNLFGGGI
Disordered region (IsUnstruct)
***IALGTLLQGLNFGTVDKIFIRFPAKWWKDGCQGFNLYWTQQDKTDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLVSGQTPVDLSNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNAIEGLNFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWIAGPTARYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVRSAWSINPHFRGSY*****************************************************APVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVYLRREGFFEKLVNIAVKELEHKGNQVGRILNLFG***
Disordered Region (DISOPRED)
*****LGTLLQGLNFGTVDKIFIRFPAKWWKDGCQGFNLYWTQQDKTDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLVSGQTPVDLSNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNAIEGLNFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWIAGPTARYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQP****NGSDRLNTSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVYLRREG*********************RILNLFGGGI
Disordered Region (DISEMBL)
MVQIALGTLLQGLNFGTVDKIFIRFPAKWWKDGCQGFNLYWTQQDKTDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLVSGQTPVDLSNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNAIEGLNFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWIAGPTARYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVRSAWSINPHFRGS***************************PLCRRSYQPTSLRNGSDRLNTSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVYLRREGFFEKLVNIAVKELEHKGNQVGRILNLFGGGI
Disordered Region (DISPRO)
MVQIALGTLLQGLNFGTVDKIFIRFPAKWWKDGCQGFNLYWTQQDKTDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLVSGQTPVDLSNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNAIEGLNFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWIAGPTARYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLNTSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVYLRREGFFEKLVNIAVKELEHKGNQVGRILNLFGGGI
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVQIALGTLLQGLNFGTVDKIFIRFPAKWWKDGCQGFNLYWTQQDKTDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLVSGQTPVDLSNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNAIEGLNFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWIAGPTARYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLNTSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVYLRREGFFEKLVNIAVKELEHKGNQVGRILNLFGGGI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	412	2.2.26 [Sep-21-2011]
Q9NWM0	555	Spermine oxidase OS=Homo	yes	N/A	0.563	0.418	0.312	2e-25
Q99K82	555	Spermine oxidase OS=Mus m	no	N/A	0.541	0.401	0.318	2e-25
Q865R1	512	Peroxisomal N(1)-acetyl-s	no	N/A	0.614	0.494	0.279	6e-24
Q6QHF9	649	Peroxisomal N(1)-acetyl-s	no	N/A	0.587	0.372	0.285	2e-22
Q8C0L6	504	Peroxisomal N(1)-acetyl-s	no	N/A	0.601	0.492	0.295	3e-22
Q9LID0	746	Lysine-specific histone d	yes	N/A	0.621	0.343	0.274	6e-20
Q6YYZ1	763	Lysine-specific histone d	yes	N/A	0.550	0.297	0.271	4e-18
P18487	504	Protein anon-37Cs OS=Dros	no	N/A	0.548	0.448	0.294	3e-17
Q9CAE3	789	Lysine-specific histone d	no	N/A	0.570	0.297	0.283	1e-16
O96566	501	Protein anon-37Cs (Fragme	N/A	N/A	0.570	0.469	0.287	1e-16

>sp|Q9NWM0|SMOX_HUMAN Spermine oxidase OS=Homo sapiens GN=SMOX PE=1 SV=1

 Score =  117 bits (293), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/288 (31%), Positives = 118/288 (40%), Gaps = 56/288 (19%)

Query: 102 DWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFV-PSLPAQKLNAIEGLNFGTV 160
           D + Q    V C D  +  A  +I+TV LGVLK +  +F  P LP +K+ AI  L  GT 
Sbjct: 306 DEDEQWSVVVECEDCELIPADHVIVTVSLGVLKRQYTSFFRPGLPTEKVAAIHRLGIGTT 365

Query: 161 DKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGF---YMDAEDP 217
           DKIF+ F   +W   C    F W  + +         +    W   I GF   Y      
Sbjct: 366 DKIFLEFEEPFWGPECNSLQFVWEDEAESHTLTYPPEL----WYRKICGFDVLYPPERYG 421

Query: 218 LTLLGWIAGPTARYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVRSAWSINPHFRG 277
             L GWI G  A  ME      +      + R F G    IP+P RI+RSAW  NP+FRG
Sbjct: 422 HVLSGWICGEEALVMEKCDDEAVAEICTEMLRQFTGNPN-IPKPRRILRSAWGSNPYFRG 480

Query: 278 SYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLNTSAAD---LAAP 334
           SYS+                                         ++ +S AD   LA P
Sbjct: 481 SYSY----------------------------------------TQVGSSGADVEKLAKP 500

Query: 335 VINREGRPV----LLFAGEATSPHHYGTVNGAVESGARETANAIVYLR 378
           +   E        +LF+GEAT   +Y T +GA+ SG RE A  I   R
Sbjct: 501 LPYTESSKTAPMQVLFSGEATHRKYYSTTHGALLSGQREAARLIEMYR 548

Flavoenzyme which catalyzes the oxidation of spermine to spermidine. Can also use N(1)-acetylspermine and spermidine as substrates, with different affinity depending on the isoform (isozyme) and on the experimental conditions. Plays an important role in the regulation of polyamine intracellular concentration and has the potential to act as a determinant of cellular sensitivity to the antitumor polyamine analogs. May contribute to beta-alanine production via aldehyde dehydrogenase conversion of 3-amino-propanal.
Homo sapiens (taxid: 9606)
EC: 1EC: .EC: 5EC: .EC: 3EC: .EC: 1EC: 6

>sp|Q99K82|SMOX_MOUSE Spermine oxidase OS=Mus musculus GN=Smox PE=1 SV=1

 Score =  117 bits (292), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/279 (31%), Positives = 115/279 (41%), Gaps = 56/279 (20%)

Query: 111 VSCSDGSVYTAYKIIITVPLGVLKSKLITFV-PSLPAQKLNAIEGLNFGTVDKIFIRFPA 169
           V C D  V  A  +I+TV LGVLK +  +F  P LP +K+ AI  L  GT DKIF+ F  
Sbjct: 315 VECEDCEVIPADHVIVTVSLGVLKRQYTSFFRPCLPTEKVAAIHRLGIGTTDKIFLEFEE 374

Query: 170 KWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGF---YMDAEDPLTLLGWIAG 226
            +W   C    F W  + +         +    W   I GF   Y        L GWI G
Sbjct: 375 PFWGPECNSLQFVWEDEAESCTLTYPPEL----WYRKICGFDVLYPPERYGHVLSGWICG 430

Query: 227 PTARYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVRSAWSINPHFRGSYSHHGPTQ 286
             A  ME      +      + R F G    IP+P RI+RSAW  NP+FRGSYS+     
Sbjct: 431 EEALVMERCDDEAVAEICTEMLRQFTGNPN-IPKPRRILRSAWGSNPYFRGSYSY----- 484

Query: 287 HQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLNTSAAD---LAAPVINREGRPV 343
                                               ++ +S AD   LA P+   E    
Sbjct: 485 -----------------------------------TQVGSSGADVEKLAKPLPYTESSKT 509

Query: 344 ----LLFAGEATSPHHYGTVNGAVESGARETANAIVYLR 378
               +LF+GEAT   +Y T +GA+ SG RE A  I   R
Sbjct: 510 APMQVLFSGEATHRKYYSTTHGALLSGQREAARLIEMYR 548

Flavoenzyme which catalyzes the oxidation of spermine to spermidine. Can also use N(1)-acetylspermine and spermidine as substrates, with different affinity depending on the isoform (isozyme) and on the experimental conditions. Plays an important role in the regulation of polyamine intracellular concentration and has the potential to act as a determinant of cellular sensitivity to the antitumor polyamine analogs. May contribute to beta-alanine production via aldehyde dehydrogenase conversion of 3-amino-propanal.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 5

EC: .

EC: 3

EC: .

EC: 1

EC: 6

>sp|Q865R1|PAOX_BOVIN Peroxisomal N(1)-acetyl-spermine/spermidine oxidase OS=Bos taurus GN=PAOX PE=1 SV=3

 Score =  112 bits (280), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 86/308 (27%), Positives = 135/308 (43%), Gaps = 55/308 (17%)

Query: 76  LTLLVSGQTPVDLSNKILYKKEVNKIDW--EYQNGAA--------VSCSDGSVYTAYKII 125
           LT  +    P D+   +++ K V  I W   ++  +A        V C DG  + A+ ++
Sbjct: 229 LTDCIMASLPKDV---MVFDKPVKTIHWNGSFREASAPGETFPVLVECEDGDCFPAHHVV 285

Query: 126 ITVPLGVLKSKLITFV-PSLPAQKLNAIEGLNFGTVDKIFIRFPAKWWKDGCQGFNFYWT 184
           +TVPLG  K  L TF  P LP +K+ AI  + FGT +KIF+ F   +W+  CQ     W 
Sbjct: 286 VTVPLGFFKKHLDTFFEPPLPTEKVEAIRKIGFGTNNKIFLEFEEPFWEPDCQHIQVVW- 344

Query: 185 QQDKMDLFKDMVHVDGKPWVWGILGFYM--DAEDPLTLLGWIAGPTARYMETLPMAVLQA 242
             + M   +D        W   ++GF++    +    L G+IAG  + +METL    +  
Sbjct: 345 --EDMSPLEDTAPELQDAWFKKLIGFWVLPPFQASHVLCGFIAGLESEFMETLSDEDVLR 402

Query: 243 DIMRLFRHFLGGAYIIPEPIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRP 302
            + ++ R   G    +P P  ++RS W   P+ RGSYS+                     
Sbjct: 403 SLTQVLRRVTGNPQ-LPAPRSMLRSCWHSAPYTRGSYSY--------------------- 440

Query: 303 PRAPLCRRSYQPTSLRNGSDRLNTSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGA 362
                        ++ +  D ++  A  L  P   +  +  +LFAGEAT    Y T +GA
Sbjct: 441 ------------VAVGSSGDDMDRLAQPL--PSDGKGAQLQVLFAGEATHRTFYSTTHGA 486

Query: 363 VESGARET 370
           + SG RE 
Sbjct: 487 LLSGWREA 494

Flavoenzyme which catalyzes the oxidation of N(1)-acetylspermine to spermidine and is thus involved in the polyamine back-conversion. Can also oxidize N(1)-acetylspermidine to putrescine. Substrate specificity: N(1)-acetylspermine = N(1)-acetylspermidine > N(1),N(12)-diacylspermine >> spermine. Does not oxidize spermidine. Plays an important role in the regulation of polyamine intracellular concentration.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 5

EC: .

EC: 3

EC: .

EC: 1

EC: 3

>sp|Q6QHF9|PAOX_HUMAN Peroxisomal N(1)-acetyl-spermine/spermidine oxidase OS=Homo sapiens GN=PAOX PE=1 SV=3

 Score =  107 bits (267), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 127/294 (43%), Gaps = 52/294 (17%)

Query: 90  NKILYKKEVNKIDW--EYQNGA--------AVSCSDGSVYTAYKIIITVPLGVLKSKLIT 139
           + ++++K V  I W   +Q  A        +V C DG  + A+ +I+TVPLG L+  L T
Sbjct: 377 DTVVFEKPVKTIHWNGSFQEAAFPGETFPVSVECEDGDRFPAHHVIVTVPLGFLREHLDT 436

Query: 140 FV-PSLPAQKLNAIEGLNFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHV 198
           F  P LPA+K  AI  + FGT +KIF+ F   +W+  CQ     W     ++   D    
Sbjct: 437 FFDPPLPAEKAEAIRKIGFGTNNKIFLEFEEPFWEPDCQLIQLVWEDTSPLE---DAAPE 493

Query: 199 DGKPWVWGILGFYM--DAEDPLTLLGWIAGPTARYMETLPMAVLQADIMRLFRHFLGGAY 256
               W   ++GF +         L G+IAG  + +METL    +   + ++ R   G   
Sbjct: 494 LQDAWFRKLIGFVVLPAFASVHVLCGFIAGLESEFMETLSDEEVLLCLTQVLRRVTGNPR 553

Query: 257 IIPEPIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTS 316
            +P P  ++RS W   P+ RGSYS+                                  +
Sbjct: 554 -LPAPKSVLRSRWHSAPYTRGSYSY---------------------------------VA 579

Query: 317 LRNGSDRLNTSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARET 370
           + +    L+  A  L  P      +  +LFAGEAT    Y T +GA+ SG RE 
Sbjct: 580 VGSTGGDLDLLAQPL--PADGAGAQLQILFAGEATHRTFYSTTHGALLSGWREA 631

Flavoenzyme which catalyzes the oxidation of N(1)-acetylspermine to spermidine and is thus involved in the polyamine back-conversion. Can also oxidize N(1)-acetylspermidine to putrescine. Substrate specificity: N(1)-acetylspermine = N(1)-acetylspermidine > N(1),N(12)-diacylspermine >> spermine. Does not oxidize spermidine. Plays an important role in the regulation of polyamine intracellular concentration and has the potential to act as a determinant of cellular sensitivity to the antitumor polyamine analogs.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 5

EC: .

EC: 3

EC: .

EC: 1

EC: 3

>sp|Q8C0L6|PAOX_MOUSE Peroxisomal N(1)-acetyl-spermine/spermidine oxidase OS=Mus musculus GN=Paox PE=1 SV=3

 Score =  106 bits (265), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 89/301 (29%), Positives = 129/301 (42%), Gaps = 53/301 (17%)

Query: 90  NKILYKKEVNKIDW--EYQNGA--------AVSCSDGSVYTAYKIIITVPLGVLKSKLIT 139
           + + + K V  I W   +Q  A         V C DG+   A+ +I+TVPLG LK    T
Sbjct: 232 DTVAFDKPVKTIHWNGSFQEAAFPGETFPVLVECEDGARLPAHHVIVTVPLGFLKEHQDT 291

Query: 140 FV-PSLPAQKLNAIEGLNFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHV 198
           F  P LPA+K  AI+ L FGT +KIF+ F   +W+  CQ     W     +   +D    
Sbjct: 292 FFEPPLPAKKAEAIKKLGFGTNNKIFLEFEEPFWEPDCQFIQVVWEDTSPL---QDTALS 348

Query: 199 DGKPWVWGILGFYMDA--EDPLTLLGWIAGPTARYMETLPMAVLQADIMRLFRHFLGGAY 256
               W   ++GF +    E    L G+IAG  + +METL    +   + ++ R   G   
Sbjct: 349 LQDTWFKKLIGFLVQPSFESSHVLCGFIAGLESEFMETLSDEEVLLSLTQVLRRVTGNPQ 408

Query: 257 IIPEPIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTS 316
            +P    + RS W   P+ RGSYS+                                  +
Sbjct: 409 -LPAAKSVRRSQWHSAPYTRGSYSY---------------------------------VA 434

Query: 317 LRNGSDRLNTSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVY 376
           + +  D L+  A  L  P      +  +LFAGEAT    Y T +GA+ SG RE A+ +V 
Sbjct: 435 VGSTGDDLDLMAQPL--PEDGTGTQLQVLFAGEATHRTFYSTTHGALLSGWRE-ADRLVS 491

Query: 377 L 377
           L
Sbjct: 492 L 492

Flavoenzyme which catalyzes the oxidation of N(1)-acetylspermine to spermidine and is thus involved in the polyamine back-conversion. Can also oxidize N(1)-acetylspermidine to putrescine. Substrate specificity: N(1)-acetylspermine = N(1)-acetylspermidine > N(1),N(12)-diacylspermine >> spermine. Does not oxidize spermidine. Plays an important role in the regulation of polyamine intracellular concentration and has the potential to act as a determinant of cellular sensitivity to the antitumor polyamine analogs.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 5

EC: .

EC: 3

EC: .

EC: 1

EC: 3

>sp|Q9LID0|LDL2_ARATH Lysine-specific histone demethylase 1 homolog 2 OS=Arabidopsis thaliana GN=LDL2 PE=2 SV=1

 Score = 99.0 bits (245), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 93/339 (27%), Positives = 136/339 (40%), Gaps = 83/339 (24%)

Query: 40  YWTQQDKTDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLVSGQTPVDLSNKILYKKEVN 99
           YW Q D  ++  D   + G  W              +  L  G         I+Y K V+
Sbjct: 335 YWDQDDPYEMGGDHCFLAGGNWRL------------INALAEGLP-------IIYGKSVD 375

Query: 100 KIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNAIEGLNFGT 159
            I  +Y +G     S   ++ A  I+ TVPLGVLK + I F P LP +K  AI+ L FG 
Sbjct: 376 TI--KYGDGGVEVISGSQIFQADMILCTVPLGVLKKRSIKFEPELPRRKQAAIDRLGFGL 433

Query: 160 VDKIFIRFPAKWWKDGCQGF---NFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAED 216
           ++K+ + FP+ +W D    F   N     + +  LF     V G P              
Sbjct: 434 LNKVAMLFPSVFWGDELDTFGCLNESSINRGEFFLFYAYHTVSGGP-------------- 479

Query: 217 PLTLLGWIAGPTARYMETLPMAVLQADIMRLFRHFLG-GAYIIPEPIRIVRSAWSINPHF 275
              L+  +AG  A+  E    +VL   +++  R   G    ++P+PI+ V + W  +P  
Sbjct: 480 --ALVALVAGEAAQRFECTEPSVLLHRVLKKLRGIYGPKGVVVPDPIQTVCTRWGSDPLS 537

Query: 276 RGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLNTSAADLAAPV 335
            GSYSH                                   +R GS  ++     LA  V
Sbjct: 538 YGSYSH-----------------------------------VRVGSSGVDYDI--LAESV 560

Query: 336 INREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAI 374
            NR     L FAGEAT+  H  T++GA  SG RE +  +
Sbjct: 561 SNR-----LFFAGEATTRQHPATMHGAYLSGLREASKIL 594

Probable histone demethylase that reduces the levels of histone H3 'Lys-4' methylation in chromatin of the floral repressor FLOWERING LOCUS C (FLC) and the sporophytically silenced floral repressor FWA. Seems to act in partial redundancy with FLOWERING LOCUS D (FLD) to repress FLC expression. Required for cytosine methylation of FWA.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q6YYZ1|LDL2_ORYSJ Lysine-specific histone demethylase 1 homolog 2 OS=Oryza sativa subsp. japonica GN=Os08g0143400 PE=2 SV=1

 Score = 92.8 bits (229), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 77/284 (27%), Positives = 123/284 (43%), Gaps = 57/284 (20%)

Query: 92  ILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNA 151
           +LY+K V +I+   ++G +++   G V+ A   + T PLGVLKS+ I F P LP +KL A
Sbjct: 369 VLYEKTVKRIE-HGEDGVSITVEGGQVFKADMALCTAPLGVLKSRSIIFEPELPERKLEA 427

Query: 152 IEGLNFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFY 211
           I+ L FG ++K+ + FP  +W +    F     ++ K   F              +   Y
Sbjct: 428 IQRLGFGLLNKVAMVFPHVFWDEEIDTFGCLNKERSKRGEF-------------FLFYSY 474

Query: 212 MDAEDPLTLLGWIAGPTARYMETLPMAVLQADIMRLFRHFLG-GAYIIPEPIRIVRSAWS 270
                   L+  +AG  A   E +  AV    ++ + +   G     +P+PI+   + W 
Sbjct: 475 HTVSGGAVLIALVAGEAALEFEKVDPAVALHRVLGILKGIYGPKGVTVPDPIQSCCTRWG 534

Query: 271 INPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLNTSAAD 330
            +P   GSYSH         R+G S                        G+D       D
Sbjct: 535 SDPLCSGSYSH--------IRVGSS------------------------GTDY------D 556

Query: 331 LAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAI 374
           + A  +N      L FAGEAT+  +  T++GA+ SG RE +  +
Sbjct: 557 ILAESVNDR----LFFAGEATNRAYPATMHGALLSGLREASKIL 596

Probable histone demethylase.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|P18487|A37C_DROME Protein anon-37Cs OS=Drosophila melanogaster GN=anon-37Cs PE=2 SV=3

 Score = 90.1 bits (222), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 122/292 (41%), Gaps = 66/292 (22%)

Query: 96  KEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKS-KLITFVPSLPAQKLNAIEG 154
           K V +I W      +V C DGS+Y A  II T+PLGVLKS   + F P+LP  K+ AI  
Sbjct: 260 KPVGQIQWTPAPMKSVGCLDGSLYNADHIICTLPLGVLKSFAGVLFRPTLPLDKMLAIRN 319

Query: 155 LNFGTVDKIFIRFP---AKWWKDGCQG----FNFYWTQQDKMDLFKDMVHVDGKPWVWGI 207
           L FG   KI++ +     +W K   +      N    QQ + +  + +V +   P    +
Sbjct: 320 LGFGNPLKIYLSYKKPIGRWLKGSLRPLGTLLNPSVEQQPERNWTQQVVEISQVPSSQHV 379

Query: 208 LGFYMDAEDPLTLLGWIAGPTARYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVRS 267
           L  +            + G     +E LP   L   I  L R  +  ++++P P  ++RS
Sbjct: 380 LEVH------------VGGGYYEEIEKLPDEELLEQITGLLRRCV-SSHLVPYPQELLRS 426

Query: 268 AWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLNTS 327
            WS +  + G                                R Y  T         N+S
Sbjct: 427 NWSTSACYLGG-------------------------------RPYFST---------NSS 446

Query: 328 AAD---LAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVY 376
           A D   LAAP+   E  P LLFAG+ATS   +GT++ A  SG RE    I Y
Sbjct: 447 ARDVQRLAAPL--GEKSPGLLFAGDATSLRGFGTIDAARSSGIREAQRIIDY 496

Has a non-vital function.

Drosophila melanogaster (taxid: 7227)

>sp|Q9CAE3|LDL3_ARATH Lysine-specific histone demethylase 1 homolog 3 OS=Arabidopsis thaliana GN=FLD PE=1 SV=1

 Score = 87.8 bits (216), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 124/300 (41%), Gaps = 65/300 (21%)

Query: 92  ILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNA 151
           ILY+K V  I +   NG  V+  +  VY    ++ TVPLGVLK+  I FVP LP +KL+ 
Sbjct: 393 ILYEKTVQTIRYG-SNGVKVTAGN-QVYEGDMVLCTVPLGVLKNGSIKFVPELPQRKLDC 450

Query: 152 IEGLNFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFY 211
           I+ L FG ++K+ + FP  +W      F       +    F   +     P   G L   
Sbjct: 451 IKRLGFGLLNKVAMLFPYVFWSTDLDTFGHLTEDPNYRGEF--FLFYSYAPVAGGAL--- 505

Query: 212 MDAEDPLTLLGWIAGPTARYMETLPMAVLQADIMRLFRHFLGGAYI-----IPEPIRIVR 266
                   L+  +AG  A   ET+P      D +    H L G Y      +P+P++ V 
Sbjct: 506 --------LIALVAGEAAHKFETMP----PTDAVTRVLHILRGIYEPQGINVPDPLQTVC 553

Query: 267 SAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLNT 326
           + W  +P   GSYS+          +G S                       +  D L  
Sbjct: 554 TRWGGDPFSLGSYSNVA--------VGASG----------------------DDYDILAE 583

Query: 327 SAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVYLRREGFFEKL 386
           S  D         GR  L FAGEAT+  +  T++GA  +G RE AN     +  G  +++
Sbjct: 584 SVGD---------GR--LFFAGEATTRRYPATMHGAFVTGLREAANMAQSAKARGIRKRI 632

Probable histone demethylase that promotes flowering independently of the photoperiod and vernalization pathways by repressing FLOWERING LOCUS C (FLC), a floral repressor that blocks the transition from vegetative to reproductive development. Probably mediates histone H3 'Lys-4' demethylation at FLC locus. Seems to act in partial redundancy with LDL1 and LDL2 to repress FLC expression. Required for histone H4 deacetylation of FLC locus. May be a component of the histone deacetylase complex.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|O96566|A37C_DROSI Protein anon-37Cs (Fragment) OS=Drosophila simulans GN=anon-37Cs PE=3 SV=1

 Score = 87.8 bits (216), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 85/296 (28%), Positives = 123/296 (41%), Gaps = 61/296 (20%)

Query: 96  KEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKS-KLITFVPSLPAQKLNAIEG 154
           K V +I W      +V C DGS+Y A  II T+PLGVLKS   + F P+LP  K+ AI  
Sbjct: 257 KPVGQIQWTPAPMKSVGCLDGSLYNADHIICTLPLGVLKSFAGVLFRPTLPLDKMLAIRN 316

Query: 155 LNFGTVDKIFIRFP---AKWWKDGCQG----FNFYWTQQDKMDLFKDMVHVDGKPWVWGI 207
           L FG   KI++ +     +W K   +      N    QQ + +  + +V +   P    +
Sbjct: 317 LGFGNPLKIYLSYKKPIGRWLKGSLRPLGTLLNPSAEQQPERNWTQQVVEISQVPSSQHV 376

Query: 208 LGFYMDAEDPLTLLGWIAGPTARYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVRS 267
           L  +            + G     +E LP   L   I  L R  +    ++P P  ++RS
Sbjct: 377 LEVH------------VGGGYYEEIEKLPDDELLEQITGLLRRCVSNN-LVPYPQELLRS 423

Query: 268 AWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLNTS 327
            WS +  + G   +   T +  R + R                                 
Sbjct: 424 NWSTSACYLGGRPYFS-TINSARDVQR--------------------------------- 449

Query: 328 AADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAI-VYLRREGF 382
              LAAP+   E  P LLFAG+ATS + +GT++ A  SG RE    I  YL+R  F
Sbjct: 450 ---LAAPL--GEKSPGLLFAGDATSLNGFGTIDAARSSGIREAQRIIDFYLKRAHF 500

Has a non-vital function.

Drosophila simulans (taxid: 7240)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	412
110456536	123	unknown [Diaphorina citri]	0.298	1.0	0.740	1e-57
383858523	979	PREDICTED: peroxisomal N(1)-acetyl-sperm	0.665	0.279	0.346	3e-47
189234099	433	PREDICTED: similar to amine oxidase [Tri	0.614	0.584	0.380	8e-46
270002494	931	hypothetical protein TcasGA2_TC004564 [T	0.614	0.271	0.380	1e-45
340725465	695	PREDICTED: peroxisomal N(1)-acetyl-sperm	0.657	0.389	0.342	1e-44
350415297	695	PREDICTED: peroxisomal N(1)-acetyl-sperm	0.645	0.382	0.342	2e-44
328723284	475	PREDICTED: peroxisomal N(1)-acetyl-sperm	0.594	0.515	0.367	9e-44
345483413	481	PREDICTED: peroxisomal N(1)-acetyl-sperm	0.609	0.521	0.359	6e-42
195125946	478	GI12393 [Drosophila mojavensis] gi|19391	0.604	0.520	0.369	7e-42
158287397	486	AGAP011207-PA [Anopheles gambiae str. PE	0.618	0.524	0.364	7e-42

>gi|110456536|gb|ABG74721.1| unknown [Diaphorina citri]

 Score =  230 bits (586), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 117/158 (74%), Positives = 118/158 (74%), Gaps = 35/158 (22%)

Query: 255 AYIIPEPIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQP 314
           AYIIPEPIRIVRS WSINPHFRGSYS    T                             
Sbjct: 1   AYIIPEPIRIVRSVWSINPHFRGSYSSRSVT----------------------------- 31

Query: 315 TSLRNGSDRLNTSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAI 374
                 +DRLNTSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAI
Sbjct: 32  ------TDRLNTSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAI 85

Query: 375 VYLRREGFFEKLVNIAVKELEHKGNQVGRILNLFGGGI 412
           VYLRREGFFEKLVNIAVKELEHKGNQVGRILNLFGGGI
Sbjct: 86  VYLRREGFFEKLVNIAVKELEHKGNQVGRILNLFGGGI 123

Source: Diaphorina citri

Species: Diaphorina citri

Genus: Diaphorina

Family: Psyllidae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383858523|ref|XP_003704750.1| PREDICTED: peroxisomal N(1)-acetyl-spermine/spermidine oxidase-like [Megachile rotundata]

 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 111/320 (34%), Positives = 164/320 (51%), Gaps = 46/320 (14%)

Query: 88  LSNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLIT-FVPSLPA 146
           + +KI + K V  ID+   N   V+ +D S Y A  +I T  LGVLK K  T F P LP 
Sbjct: 220 IMDKIEFNKSVTNIDYTSHNDIIVTTNDDSKYIASHVIFTASLGVLKKKHTTMFTPILPV 279

Query: 147 QKLNAIEGLNFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWG 206
            K +AI+GL+FG V+KIF+ FP +WW++ C GF+  W+++DK +  +   +     W+  
Sbjct: 280 NKQHAIKGLDFGAVNKIFLEFPHRWWQEECPGFSLIWSREDKAEFIRS--YGQEYEWLCD 337

Query: 207 ILGFYMDAEDPLTLLGWIAGPTARYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVR 266
           +  F      P  L  WIAG  A+++E+L    +   +  L   FL  AY IP+  +++R
Sbjct: 338 VFAFISVDYQPRVLCAWIAGKYAKHIESLCDNDVSDGLYLLLEKFLSKAYNIPKFDQMLR 397

Query: 267 SAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLNT 326
           S+W  + HF GSYS    T                                   ++ +N 
Sbjct: 398 SSWYTDEHFYGSYSFRSLT-----------------------------------TEEMNI 422

Query: 327 SAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVYLRREGFFEKL 386
              DLA P I  +G+P+LLFAGEAT  H+Y TV+GAVE+G RE    + + R  G+ +++
Sbjct: 423 ETKDLAEPFITADGKPILLFAGEATHDHYYSTVHGAVETGYREADRIVDFYRTCGWLKQV 482

Query: 387 VNIAVKELEHKGNQVGRILN 406
           V+          N+VGRILN
Sbjct: 483 VS--------NCNKVGRILN 494

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189234099|ref|XP_967311.2| PREDICTED: similar to amine oxidase [Tribolium castaneum]

 Score =  191 bits (484), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 111/292 (38%), Positives = 150/292 (51%), Gaps = 39/292 (13%)

Query: 91  KILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLN 150
           +IL  KEVNKI W+  N   V C+D S +    +IIT  +G LK+   +F P LP  K +
Sbjct: 178 EILLNKEVNKIIWDCDNNVTVRCTDNSAFKCDHLIITASIGALKNLSESFEPQLPPIKQS 237

Query: 151 AIEGLNFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVH---VDGKPWVWGI 207
           AI+    G V KI ++FP KWW D  +G +  W   D+  L  +       DGK W+  I
Sbjct: 238 AIDLTAIGDVKKILLKFPKKWWPDSFKGLSLVWRDSDREKLSTEFPQGPIKDGKSWLEYI 297

Query: 208 LGFYMDAEDPLTLLGWIAGPTARYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVRS 267
            GFY+    P  LLGW+ GP    +E LP  V+ A  M L + F+G  Y I EP +I+RS
Sbjct: 298 YGFYVIDSHPDVLLGWVVGPMVGEVELLPDDVVVAGCMFLLKKFVGDKYEISEPQKILRS 357

Query: 268 AWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLNTS 327
            W  NPHF G YS      ++C                               +++ N +
Sbjct: 358 KWRNNPHFNGCYS------YRCLE-----------------------------AEKKNVT 382

Query: 328 AADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVYLRR 379
             DLA+PV N   + VLLFAGEAT P +Y TV+GA+E+G RE A+ IV L +
Sbjct: 383 WEDLASPVANSSSKQVLLFAGEATHPIYYSTVHGAIETGYRE-ADRIVNLYK 433

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270002494|gb|EEZ98941.1| hypothetical protein TcasGA2_TC004564 [Tribolium castaneum]

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 111/292 (38%), Positives = 150/292 (51%), Gaps = 39/292 (13%)

Query: 91  KILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLN 150
           +IL  KEVNKI W+  N   V C+D S +    +IIT  +G LK+   +F P LP  K +
Sbjct: 221 EILLNKEVNKIIWDCDNNVTVRCTDNSAFKCDHLIITASIGALKNLSESFEPQLPPIKQS 280

Query: 151 AIEGLNFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVH---VDGKPWVWGI 207
           AI+    G V KI ++FP KWW D  +G +  W   D+  L  +       DGK W+  I
Sbjct: 281 AIDLTAIGDVKKILLKFPKKWWPDSFKGLSLVWRDSDREKLSTEFPQGPIKDGKSWLEYI 340

Query: 208 LGFYMDAEDPLTLLGWIAGPTARYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVRS 267
            GFY+    P  LLGW+ GP    +E LP  V+ A  M L + F+G  Y I EP +I+RS
Sbjct: 341 YGFYVIDSHPDVLLGWVVGPMVGEVELLPDDVVVAGCMFLLKKFVGDKYEISEPQKILRS 400

Query: 268 AWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLNTS 327
            W  NPHF G YS      ++C                               +++ N +
Sbjct: 401 KWRNNPHFNGCYS------YRCLE-----------------------------AEKKNVT 425

Query: 328 AADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVYLRR 379
             DLA+PV N   + VLLFAGEAT P +Y TV+GA+E+G RE A+ IV L +
Sbjct: 426 WEDLASPVANSSSKQVLLFAGEATHPIYYSTVHGAIETGYRE-ADRIVNLYK 476

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340725465|ref|XP_003401090.1| PREDICTED: peroxisomal N(1)-acetyl-spermine/spermidine oxidase-like [Bombus terrestris]

 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 107/312 (34%), Positives = 156/312 (50%), Gaps = 41/312 (13%)

Query: 79  LVSGQTPVDLSNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLI 138
           + + +  + +  KI + K+V  ID+   N   V   DGS Y A  II T  LGVLK K  
Sbjct: 211 ISNAKNKLPIMEKIEFNKDVYNIDYTSDNNIIVKTKDGSTYKASHIIFTASLGVLKEKHN 270

Query: 139 T-FVPSLPAQKLNAIEGLNFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVH 197
           T F P LP  K +AI+GLN GTV+K+F+ FP +WW++ C GF+  W+++DK +  K   +
Sbjct: 271 TMFTPLLPGIKQHAIKGLNIGTVNKVFLEFPRRWWQEECAGFSLIWSKEDKEEFIKS--Y 328

Query: 198 VDGKPWVWGILGFYMDAEDPLTLLGWIAGPTARYMETLPMAVLQADIMRLFRHFLGGAYI 257
                W+  +  F      P  L  WI+G  A+ ME L    +   +  L   FL   Y 
Sbjct: 329 GQDYEWLCDVFAFISVDYQPRVLCAWISGKFAKQMELLSDTDVSDGLYLLLEMFLSKTYN 388

Query: 258 IPEPIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSL 317
           IP+  +++RS+W  + +FRGSY+    T                                
Sbjct: 389 IPKFDQMIRSSWYTDEYFRGSYTFKSIT-------------------------------- 416

Query: 318 RNGSDRLNTSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVYL 377
              +++LN    DLA P+I  +G+P++LFAGEAT   +Y TV+GAVE+G RE    I + 
Sbjct: 417 ---TEKLNVKTEDLAEPIILADGKPIILFAGEATHERYYSTVHGAVETGFREADRIIDFY 473

Query: 378 RREGF---FEKL 386
           R  G    F+KL
Sbjct: 474 RTRGCINNFDKL 485

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350415297|ref|XP_003490596.1| PREDICTED: peroxisomal N(1)-acetyl-spermine/spermidine oxidase-like [Bombus impatiens]

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 104/304 (34%), Positives = 152/304 (50%), Gaps = 38/304 (12%)

Query: 79  LVSGQTPVDLSNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLI 138
           + + +  + +  KI + K+V  ID+   N   V   DGS Y A  +I T  LGVLK K  
Sbjct: 211 ISNAKNKLPIMEKIEFNKDVYNIDYTSDNNIIVKTKDGSTYKASHVIFTASLGVLKEKHN 270

Query: 139 T-FVPSLPAQKLNAIEGLNFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVH 197
           T F P LP  K +AI+GLN GTV+K+F+ FP +WW++ C GF+  W+++DK +  K   +
Sbjct: 271 TMFTPLLPGTKQHAIKGLNIGTVNKVFLEFPHRWWQEECAGFSLIWSKEDKEEFIKS--Y 328

Query: 198 VDGKPWVWGILGFYMDAEDPLTLLGWIAGPTARYMETLPMAVLQADIMRLFRHFLGGAYI 257
                W+  +  F      P  L  WI+G  A+ ME L    +   +  L   FL   Y 
Sbjct: 329 GQDYEWLCDVFAFISVDYQPRVLCAWISGKFAKQMELLSDNDVFDGLYLLLEMFLSKTYN 388

Query: 258 IPEPIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSL 317
           IP+  +++RS+W  +  FRGSY+    T                                
Sbjct: 389 IPKFDQMIRSSWYTDECFRGSYTFKSIT-------------------------------- 416

Query: 318 RNGSDRLNTSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVYL 377
              +++LN    DLA P+I  +G+P++LFAGEAT  H+Y TV+GAVE+G RE    I + 
Sbjct: 417 ---TEKLNVKTEDLAEPIILADGKPIILFAGEATHEHYYSTVHGAVETGFREADRIIDFY 473

Query: 378 RREG 381
           R  G
Sbjct: 474 RTRG 477

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328723284|ref|XP_001948577.2| PREDICTED: peroxisomal N(1)-acetyl-spermine/spermidine oxidase-like [Acyrthosiphon pisum]

 Score =  184 bits (466), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 104/283 (36%), Positives = 147/283 (51%), Gaps = 38/283 (13%)

Query: 88  LSNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLIT-FVPSLPA 146
           + +K+++ KEV KI W   + A V C+D S + A  I+ T+ LGVLK+     F P LP 
Sbjct: 220 IKDKVIFGKEVVKIYWS-GDQAEVLCADNSRFKAQCILTTMSLGVLKNVCNELFEPELPE 278

Query: 147 QKLNAIEGLNFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWG 206
            KL AI+ L  GTVDK+F++FP  WW +   GF+F W+  D+    K+     G  ++  
Sbjct: 279 YKLKAIQNLGIGTVDKLFLKFPYSWWSENTTGFSFLWSDDDREKFIKENKR-RGWDYLCD 337

Query: 207 ILGFYMDAEDPLTLLGWIAGPTARYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVR 266
           + GFY+    P TLLGWI GP AR ME   +  ++  +M L   FLG  Y IP P  + R
Sbjct: 338 VFGFYICDNCPDTLLGWIVGPAARNMERKSLDEIKIGLMYLLNKFLGDTYTIPFPDLVTR 397

Query: 267 SAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLNT 326
           S W  N HF GSYS H                                      +D+   
Sbjct: 398 SQWGSNSHFYGSYSFHSMN-----------------------------------TDKEGK 422

Query: 327 SAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARE 369
           + ++LA P+IN +G+ +LLF GEAT   ++ TV+GA+E+G RE
Sbjct: 423 ANSELAKPLINSDGKNILLFGGEATHSSYFSTVHGAIETGWRE 465

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345483413|ref|XP_001602253.2| PREDICTED: peroxisomal N(1)-acetyl-spermine/spermidine oxidase-like [Nasonia vitripennis]

 Score =  177 bits (450), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 104/289 (35%), Positives = 141/289 (48%), Gaps = 38/289 (13%)

Query: 91  KILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLIT-FVPSLPAQKL 149
           KIL  KEV  ID+       V  +DGS+Y A  +I T  LGVLK +    F PSLP  K+
Sbjct: 224 KILLNKEVLHIDYSSGKEIKVVTTDGSIYKASNLIFTASLGVLKEQYSRLFTPSLPPLKI 283

Query: 150 NAIEGLNFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILG 209
            AI+G N G  +KIF+ FP +WW     G  F W+Q +K   FK+  H   + W+  +  
Sbjct: 284 RAIKGFNIGVANKIFLEFPYRWWPQHSGGLCFMWSQAEKKK-FKE-THTKDQHWLCDVFK 341

Query: 210 FYMDAEDPLTLLGWIAGPTARYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVRSAW 269
           F+     P  L GW+ GP A+Y+E L    +  D+  L + FL   Y IP+P  I+RS W
Sbjct: 342 FFTVDNQPRLLNGWVVGPNAKYIEGLSDEKVLNDLYFLLQKFLSHIYDIPKPNAIIRSKW 401

Query: 270 SINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLNTSAA 329
             + H RGSYS+                                       ++RLN    
Sbjct: 402 YSDKHTRGSYSNQTLE-----------------------------------TERLNVRTK 426

Query: 330 DLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVYLR 378
           DL  P+     +P++LFAGEAT  H+Y TV+GA+E+G RE    I Y R
Sbjct: 427 DLYDPIKGSTEKPLILFAGEATHEHYYSTVHGAIETGFREADRIIDYYR 475

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195125946|ref|XP_002007435.1| GI12393 [Drosophila mojavensis] gi|193919044|gb|EDW17911.1| GI12393 [Drosophila mojavensis]

 Score =  177 bits (450), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 108/292 (36%), Positives = 150/292 (51%), Gaps = 43/292 (14%)

Query: 88  LSNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLIT-FVPSLPA 146
           L  ++L+ K +++I+WE      V C +G V TA  +I TV LGVLK +  + FVP+LP 
Sbjct: 223 LKGRVLFNKRISQINWEGAGDLIVRCWNGEVITADHVICTVSLGVLKEQHASMFVPALPE 282

Query: 147 QKLNAIEGLNFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWG 206
            K+ AI GL  GTVDK F+ F  +       GF+  W Q+D  +L         + W+  
Sbjct: 283 AKVRAINGLKLGTVDKFFLEFAVRPLPTDWPGFSCLWLQEDLEEL-----RASERFWLES 337

Query: 207 ILGFYMDAEDPLTLLGWIAGPTARYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVR 266
           + GFY  +  P  L GWI G  AR+METL    +   ++ LFR FL   + +P P+R +R
Sbjct: 338 VFGFYPVSYQPRILQGWIIGAHARHMETLTEEQVLEGLLWLFRKFL--PFDLPHPLRCLR 395

Query: 267 SAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLNT 326
           + W  NP+FRGSY+             R++Y                       +D L T
Sbjct: 396 TQWHANPNFRGSYTF------------RTTY-----------------------ADELRT 420

Query: 327 SAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVYLR 378
            A DL AP+++  GRP L FAGEAT  H+Y TV+GA E+G RE      Y R
Sbjct: 421 GAWDLEAPLLDVGGRPRLQFAGEATHKHYYSTVHGAAETGWREAERLNTYYR 472

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158287397|ref|XP_309435.4| AGAP011207-PA [Anopheles gambiae str. PEST] gi|157019631|gb|EAA05268.4| AGAP011207-PA [Anopheles gambiae str. PEST]

 Score =  177 bits (450), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 109/299 (36%), Positives = 150/299 (50%), Gaps = 44/299 (14%)

Query: 79  LVSGQTPVDLSNKILYKKEVNKIDWEYQNGAAVS--CSDGSVYTAYKIIITVPLGVLKSK 136
           L +    ++L +   + K V  I+W     + VS  C+D SVY A  +I T+ LGVLK +
Sbjct: 224 LPTAADAINLEDYTHFNKTVANINWTAGPDSLVSVRCTDNSVYDADHVICTISLGVLKER 283

Query: 137 LIT-FVPSLPAQKLNAIEGLNFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDM 195
             + F P LP  K NAI+GL  GTV+K+F+ F   +W  G QG +  W Q D  ++ K  
Sbjct: 284 YQSLFTPDLPPIKRNAIQGLTIGTVNKLFLEFEKPFWAAGWQGLSLIWNQADLEEVRK-- 341

Query: 196 VHVDGKPWVWGILGFYMDAEDPLTLLGWIAGPTARYMETLPMAVLQADIMRLFRHFLGGA 255
                  W+  + GFY+    P  L GWI+G  AR ME      ++   M L R F+ G 
Sbjct: 342 ---MPDSWMEDVFGFYIVDYQPNVLCGWISGKNARRMERASDEEVRRACMFLLRKFMKGC 398

Query: 256 YIIPEPIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPT 315
             +PEP+R  R++W  NP+FRGSY+    T                              
Sbjct: 399 -TVPEPVRFQRTSWYSNPNFRGSYTFRSMT------------------------------ 427

Query: 316 SLRNGSDRLNTSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAI 374
                +D LNTSA+ LA P+ N  G PV+ FAGEAT  H+Y TV+GAVE+G RE +  I
Sbjct: 428 -----TDLLNTSASHLAIPLTNSCGMPVVQFAGEATHDHYYSTVHGAVETGWREASRLI 481

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	412
FB|FBgn0035943	480	CG5653 [Drosophila melanogaste	0.514	0.441	0.377	4.1e-43
FB|FBgn0036749	486	CG7460 [Drosophila melanogaste	0.451	0.382	0.386	1.2e-42
FB|FBgn0036750	479	CG6034 [Drosophila melanogaste	0.480	0.413	0.350	1.2e-38
FB|FBgn0033584	509	CG7737 [Drosophila melanogaste	0.497	0.402	0.377	1.2e-33
ZFIN|ZDB-GENE-030131-5768	495	zgc:66484 "zgc:66484" [Danio r	0.417	0.347	0.385	1.2e-30
UNIPROTKB|Q5TE25	442	SMOX "Spermine oxidase" [Homo	0.648	0.604	0.328	3.9e-28
ZFIN|ZDB-GENE-090312-204	510	si:dkey-275b16.2 "si:dkey-275b	0.446	0.360	0.346	2.2e-26
UNIPROTKB|E2R8S7	555	SMOX "Uncharacterized protein"	0.424	0.315	0.375	2.5e-26
UNIPROTKB|E1B7M5	555	SMOX "Uncharacterized protein"	0.424	0.315	0.375	5.1e-26
UNIPROTKB|Q9NWM0	555	SMOX "Spermine oxidase" [Homo	0.424	0.315	0.364	7.2e-26

FB|FBgn0035943 CG5653 [Drosophila melanogaster (taxid:7227)]

 Score = 342 (125.4 bits), Expect = 4.1e-43, Sum P(2) = 4.1e-43
 Identities = 85/225 (37%), Positives = 119/225 (52%)

Query:    63 WGILGFYMDAEDPLTLLVSGQTPVDLS---NKILYKKEVNKIDWEYQNGAAVSCSDGSVY 119
             WG  G+       L + VS  TP +L     +I   K+V KI+        + C DG  +
Sbjct:   199 WGTKGYRRFLR--LLMKVSEDTPEELGLLEGRIQLDKKVIKIELACPRKVILRCQDGDYF 256

Query:   120 TAYKIIITVPLGVLKSKLIT-FVPSLPAQKLNAIEGLNFGTVDKIFIRFPAKWWKDGCQG 178
              A  +I TV LGVL+ +    FVP LPA K+NAI  L  GTV+K+++ +  +   DG  G
Sbjct:   257 GADHVICTVSLGVLQEQHEKLFVPPLPAAKVNAIRSLTLGTVNKLYLEYEKQPLPDGWVG 316

Query:   179 FNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWIAGPTARYMETLPMA 238
             F  +W ++D ++L K         WV GI G +M    P  L+ W+ GP  R+METL   
Sbjct:   317 FFCFWLEEDLVELRKTEYF-----WVEGITGVHMITCQPRMLMAWVNGPHGRHMETLSDE 371

Query:   239 VLQADIMRLFRHFLGGAYIIPEPIRIVRSAWSINPHFRGSYSHHG 283
              +   +  LFR FL   + IP P R VRS+W  NP+FRGS+S+ G
Sbjct:   372 KVLEGLYWLFRKFL--TFEIPPPKRFVRSSWFSNPNFRGSWSYRG 414

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

FB|FBgn0036749 CG7460 [Drosophila melanogaster (taxid:7227)]

 Score = 332 (121.9 bits), Expect = 1.2e-42, Sum P(2) = 1.2e-42
 Identities = 75/194 (38%), Positives = 107/194 (55%)

Query:    88 LSNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLIT-FVPSLPA 146
             L + +   + + +I+W+  +   V C +G V TA  +I TV LGVLK +    FVP+LPA
Sbjct:   231 LKDHVRLNRRIAEINWKGADELTVRCWNGEVITADHVICTVSLGVLKEQHPKLFVPALPA 290

Query:   147 QKLNAIEGLNFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWG 206
              K+ AIEGL  GTVDK F+ F          GFN  W ++D  +L    +      W+  
Sbjct:   291 AKVRAIEGLKLGTVDKFFLEFENPPLPGDWPGFNCLWLKEDLEELRASELF-----WLES 345

Query:   207 ILGFYMDAEDPLTLLGWIAGPTARYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVR 266
             + GFY  +  P  L GWI GP AR+METL    +   ++ LFR FL   +    P+R++R
Sbjct:   346 VFGFYPVSRQPRILQGWIIGPHARHMETLTEERVLEGLLWLFRKFL--PFETAHPVRMLR 403

Query:   267 SAWSINPHFRGSYS 280
             + W  NP+FRGSY+
Sbjct:   404 TQWHANPNFRGSYT 417

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

FB|FBgn0036750 CG6034 [Drosophila melanogaster (taxid:7227)]

 Score = 302 (111.4 bits), Expect = 1.2e-38, Sum P(2) = 1.2e-38
 Identities = 74/211 (35%), Positives = 112/211 (53%)

Query:    88 LSNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLIT-FVPSLPA 146
             L   +   K + KI+WE      + C +G   +A  +I TV LGVL+ K    FVP+LPA
Sbjct:   225 LKGHVHLNKRIAKINWEGDGELTLRCWNGQFVSADHVICTVSLGVLREKHHKLFVPALPA 284

Query:   147 QKLNAIEGLNFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKP-WVW 205
              K+ +IEGL  GTV+K ++ F  +   +  +   F W ++D  +L        GK  W+ 
Sbjct:   285 SKIRSIEGLKLGTVNKFYLEFEEQPVPENIREMAFLWLEEDLKELRS------GKYFWLE 338

Query:   206 GILGFY-MDAEDPLTLLGWIAGPTARYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRI 264
              +  F+ +D + P  L GWI G  +RY+ET+    +   IM +FR FL   + +P P   
Sbjct:   339 SVCYFHRVDCQ-PRLLQGWIIGAHSRYVETISEEQVLEGIMWMFRKFL--KFSVPYPKNF 395

Query:   265 VRSAWSINPHFRGSYSHHGPTQHQCRRLGRS 295
             +RS W  NP+FRGSYS++     + R  GR+
Sbjct:   396 LRSQWQSNPNFRGSYSYYSTYADELRT-GRT 425

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

FB|FBgn0033584 CG7737 [Drosophila melanogaster (taxid:7227)]

 Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
 Identities = 82/217 (37%), Positives = 115/217 (52%)

Query:    88 LSNKILYKKEVNKIDWEYQNGAA-VSCSDGSVYTAYKIIITVPLGVLKSK-LITFVPSLP 145
             L  ++L    V KI+W   +G   +  S+G    A  +++TV LGVLK + L  F P LP
Sbjct:   228 LEQRLLLGTRVVKINWNRNDGRVELQMSNGETCIADHVVVTVSLGVLKDQHLRLFEPQLP 287

Query:   146 AQKLNAIEGLNFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVW 205
              +K  AI+GL FGTV+KIF+ FP  +W +   GF   W  +D  D     +    + W+ 
Sbjct:   288 VEKQRAIDGLAFGTVNKIFVEFPEAFWPEDWTGFTMLWRDEDLDD-----IRGTSRAWLE 342

Query:   206 GILGFYMDAEDPLTLLGWIAGPTARYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIV 265
              + GFY  +  P  L GWI   + R+METLP+  +QA +M LFR FL   + IP+P    
Sbjct:   343 DVFGFYRVSYQPRILAGWITNESGRHMETLPVDEVQAGVMYLFRRFL--RWKIPDPANFR 400

Query:   266 RSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRP 302
              SAW  N +FRGSYS+      Q   LG  + +   P
Sbjct:   401 TSAWYTNDNFRGSYSYRSMDTEQ---LGTGARELSHP 434

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

ZFIN|ZDB-GENE-030131-5768 zgc:66484 "zgc:66484" [Danio rerio (taxid:7955)]

 Score = 295 (108.9 bits), Expect = 1.2e-30, Sum P(2) = 1.2e-30
 Identities = 71/184 (38%), Positives = 99/184 (53%)

Query:   104 EYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLIT-FVPSLPAQKLNAIEGLNFGTVDK 162
             E  +   V C +G  + A  +I+TV LGVLK    T F P+LP +KL+AI  L FG V+K
Sbjct:   249 EEDHPVQVVCENGQTFEADHVIVTVSLGVLKEHAKTMFDPTLPEKKLSAINDLGFGIVNK 308

Query:   163 IFIRFPAKWWKDGCQGFNFYWTQ--QDKMDLFKDMVHVDGKPW--VW--GILGFYMDAED 216
             IF+ F   +W D C G    W +  +DK D+++D+   +G+ W   W   I GF   A  
Sbjct:   309 IFLFFEKSFWPDDCAGVQLVWKEGPEDK-DVYEDLS--EGEDWKQTWFKKITGFDTVARH 365

Query:   217 PLTLLGWIAGPTARYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVRSAWSINPHFR 276
             P  L GWI G  A YME+L    +Q   +RL R   G  + +PE  + + S W  +P  R
Sbjct:   366 PTALCGWITGREALYMESLQDREIQEVCVRLLRSSTG--WPVPEVSKTLISRWGSDPQVR 423

Query:   277 GSYS 280
             GSY+
Sbjct:   424 GSYT 427

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|Q5TE25 SMOX "Spermine oxidase" [Homo sapiens (taxid:9606)]

 Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
 Identities = 93/283 (32%), Positives = 128/283 (45%)

Query:   102 DWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFV-PSLPAQKLNAIEGLNFGTV 160
             D + Q    V C D  +  A  +I+TV LGVLK +  +F  P LP +K+ AI  L  GT 
Sbjct:   163 DEDEQWSVVVECEDCELIPADHVIVTVSLGVLKRQYTSFFRPGLPTEKVAAIHRLGIGTT 222

Query:   161 DKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGF---YMDAEDP 217
             DKIF+ F   +W   C    F W  +D+ +     +    + W   I GF   Y      
Sbjct:   223 DKIFLEFEEPFWGPECNSLQFVW--EDEAE--SHTLTYPPELWYRKICGFDVLYPPERYG 278

Query:   218 LTLLGWIAGPTARYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVRSAWSINPHFRG 277
               L GWI G  A  ME      +      + R F G   I P+P RI+RSAW  NP+FRG
Sbjct:   279 HVLSGWICGEEALVMEKCDDEAVAEICTEMLRQFTGNPNI-PKPRRILRSAWGSNPYFRG 337

Query:   278 SYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLNTSAADLAAPVIN 337
             SYS+      Q    G    +  +P       ++   +S +     L +S         N
Sbjct:   338 SYSYT-----QVGSSGADVEKLAKPLPYTESSKTAHGSSTKQQPGHLFSSKCPEQPLDAN 392

Query:   338 REG-RPV-LLFAGEATSPHHYGTVNGAVESGARETANAIVYLR 378
             R   +P+ +LF+GEAT   +Y T +GA+ SG RE A  I   R
Sbjct:   393 RGAVKPMQVLFSGEATHRKYYSTTHGALLSGQREAARLIEMYR 435

GO:0016491 "oxidoreductase activity" evidence=IEA

ZFIN|ZDB-GENE-090312-204 si:dkey-275b16.2 "si:dkey-275b16.2" [Danio rerio (taxid:7955)]

 Score = 278 (102.9 bits), Expect = 2.2e-26, Sum P(2) = 2.2e-26
 Identities = 71/205 (34%), Positives = 107/205 (52%)

Query:    92 ILYKKEVNKIDWEY-QNG---------AAVSCSDGSVYTAYKIIITVPLGVLKSKLITFV 141
             +LY K V  I W Y +NG           + C +G  + A  +I+TVPLG +K    TF+
Sbjct:   239 VLYNKPVKCIHWNYTKNGPNTGGTSFPVTIECVNGETFAADHVIVTVPLGYMKKHQNTFL 298

Query:   142 -PSLPAQKLNAIEGLNFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDG 200
              PS P  KL++I+ + FGT +KIF+ F   +W + C+     W  +D+  L  D+V    
Sbjct:   299 SPSFPLHKLHSIQRMGFGTNNKIFVEFEQPFWDEDCELIYLVW--EDETHL-TDVVSDLK 355

Query:   201 KPWVWGILGF-YMDAEDPL--TLLGWIAGPTARYMETLP-MAVLQADIMRLFRHFLGGAY 256
               W+  + GF  +   +     L GWIAG  + YME+L  + VLQ  + +L R F G   
Sbjct:   356 MSWIRKLTGFTVLKPTERFGHVLCGWIAGQESEYMESLSELEVLQT-VTQLLRIFTGNPT 414

Query:   257 IIPEPIRIVRSAWSINPHFRGSYSH 281
             I+P   +++RS W   P+  GSYS+
Sbjct:   415 IMPR--KLLRSQWFHEPYSCGSYSY 437

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

UNIPROTKB|E2R8S7 SMOX "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 271 (100.5 bits), Expect = 2.5e-26, Sum P(2) = 2.5e-26
 Identities = 69/184 (37%), Positives = 91/184 (49%)

Query:   102 DWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFV-PSLPAQKLNAIEGLNFGTV 160
             D + Q    V C D  V  A  +I+TV LGVLK +  +F  P LPA+K+ AI  L  GT 
Sbjct:   306 DEDKQWPVLVECEDCEVIPADHVIVTVSLGVLKRQYTSFFRPGLPAEKVAAIHRLGIGTT 365

Query:   161 DKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGF---YMDAEDP 217
             DKIF+ F   +W   C    F W  +D+ +  + + +   + W   I GF   Y      
Sbjct:   366 DKIFLEFEEPFWGPECNSLQFVW--EDEAES-RTLTYPP-ELWYRKICGFDVLYPPERYG 421

Query:   218 LTLLGWIAGPTARYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVRSAWSINPHFRG 277
               L GWI G  A  ME      +      + R F G   I P+P RI+RSAW  NP+FRG
Sbjct:   422 HVLSGWICGEEALVMEKCDDEAVAEICTEMLRQFTGNPNI-PKPRRILRSAWGSNPYFRG 480

Query:   278 SYSH 281
             SYS+
Sbjct:   481 SYSY 484

GO:0046592 "polyamine oxidase activity" evidence=IEA

GO:0046208 "spermine catabolic process" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

UNIPROTKB|E1B7M5 SMOX "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 268 (99.4 bits), Expect = 5.1e-26, Sum P(2) = 5.1e-26
 Identities = 69/184 (37%), Positives = 89/184 (48%)

Query:   102 DWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFV-PSLPAQKLNAIEGLNFGTV 160
             D + Q    V C D  V  A  +I+TV LGVLK +  +F  P LPA+K+ AI  L  GT 
Sbjct:   306 DEDEQWPVVVECEDCEVIPADHVIVTVSLGVLKRQHASFFRPGLPAEKVAAIHRLGIGTT 365

Query:   161 DKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGF---YMDAEDP 217
             DKIF+ F   +W   C    F W  +D+ +     +    + W   I GF   Y      
Sbjct:   366 DKIFLEFEEPFWGPECNSLRFVW--EDEAE--SCTLTYPPELWYRKICGFDVLYPPERYG 421

Query:   218 LTLLGWIAGPTARYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVRSAWSINPHFRG 277
               L GWI G  A  ME      +      + R F G   I P+P RI+RSAW  NP+FRG
Sbjct:   422 HVLSGWICGEEALVMEKCDDEAVAEICTEMLRQFTGNPNI-PKPRRILRSAWGSNPYFRG 480

Query:   278 SYSH 281
             SYS+
Sbjct:   481 SYSY 484

GO:0046592 "polyamine oxidase activity" evidence=IEA

GO:0046208 "spermine catabolic process" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

UNIPROTKB|Q9NWM0 SMOX "Spermine oxidase" [Homo sapiens (taxid:9606)]

 Score = 267 (99.0 bits), Expect = 7.2e-26, Sum P(2) = 7.2e-26
 Identities = 67/184 (36%), Positives = 88/184 (47%)

Query:   102 DWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFV-PSLPAQKLNAIEGLNFGTV 160
             D + Q    V C D  +  A  +I+TV LGVLK +  +F  P LP +K+ AI  L  GT 
Sbjct:   306 DEDEQWSVVVECEDCELIPADHVIVTVSLGVLKRQYTSFFRPGLPTEKVAAIHRLGIGTT 365

Query:   161 DKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGF---YMDAEDP 217
             DKIF+ F   +W   C    F W  +D+ +     +    + W   I GF   Y      
Sbjct:   366 DKIFLEFEEPFWGPECNSLQFVW--EDEAE--SHTLTYPPELWYRKICGFDVLYPPERYG 421

Query:   218 LTLLGWIAGPTARYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVRSAWSINPHFRG 277
               L GWI G  A  ME      +      + R F G   I P+P RI+RSAW  NP+FRG
Sbjct:   422 HVLSGWICGEEALVMEKCDDEAVAEICTEMLRQFTGNPNI-PKPRRILRSAWGSNPYFRG 480

Query:   278 SYSH 281
             SYS+
Sbjct:   481 SYSY 484

GO:0052894 "norspermine:oxygen oxidoreductase activity" evidence=IEA

GO:0052895 "N1-acetylspermine:oxygen oxidoreductase (N1-acetylspermidine-forming) activity" evidence=IEA

GO:0052901 "spermine:oxygen oxidoreductase (spermidine-forming) activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA;IDA

GO:0046208 "spermine catabolic process" evidence=IEA;IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0046592 "polyamine oxidase activity" evidence=IDA

GO:0006598 "polyamine catabolic process" evidence=IDA

GO:0005829 "cytosol" evidence=TAS

GO:0006595 "polyamine metabolic process" evidence=TAS

GO:0006596 "polyamine biosynthetic process" evidence=TAS

GO:0006805 "xenobiotic metabolic process" evidence=TAS

GO:0034641 "cellular nitrogen compound metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	412
pfam01593	444	pfam01593, Amino_oxidase, Flavin containing amine	4e-38
PLN02568	539	PLN02568, PLN02568, polyamine oxidase	4e-23
PLN02268	435	PLN02268, PLN02268, probable polyamine oxidase	9e-23
PLN02529	738	PLN02529, PLN02529, lysine-specific histone demeth	6e-22
PLN02676	487	PLN02676, PLN02676, polyamine oxidase	7e-21
PLN03000	881	PLN03000, PLN03000, amine oxidase	2e-20
PLN02976	1713	PLN02976, PLN02976, amine oxidase	5e-19
PLN02328	808	PLN02328, PLN02328, lysine-specific histone demeth	5e-16
COG1231	450	COG1231, COG1231, Monoamine oxidase [Amino acid tr	1e-10

>gnl|CDD|216593 pfam01593, Amino_oxidase, Flavin containing amine oxidoreductase

 Score =  142 bits (359), Expect = 4e-38
 Identities = 81/288 (28%), Positives = 109/288 (37%), Gaps = 60/288 (20%)

Query: 87  DLSNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPA 146
            L  ++     V  I     +G  V+  DG    A  +I+TVPLGVLK   I F+P LPA
Sbjct: 216 LLGGRVRLNTRVRSITKS-GDGVTVTTVDGRTIEADAVIVTVPLGVLKR--ILFLPPLPA 272

Query: 147 QKLNAIEGLNFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWG 206
            K  AI  L FG+V K+F+ F   +W +    F    T             +    +V  
Sbjct: 273 AKQEAIRNLGFGSVSKVFLEFETPFWPENGDLFGLLVT-----------DGLSRGGYVLD 321

Query: 207 ILGFYMDAEDPLTLLGWIAGPTARYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVR 266
                        LL ++ G  AR +E L    L   ++R  R  LG    +P+P+  + 
Sbjct: 322 T--SPSSGSGRGVLLSYVLGDAARELEDLSDEELLEAVLRDLRKLLGPED-VPDPVNFLV 378

Query: 267 SAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLNT 326
           S W  +P+ RGSYS+                    P       R                
Sbjct: 379 SDWHTDPYARGSYSY-------------------PPVGDDSRYRP--------------- 404

Query: 327 SAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAI 374
               L  PV        L FAGE TS  + GTV GAVESG    A  +
Sbjct: 405 ---ALRTPVGPG-----LFFAGEHTSGGYPGTVEGAVESG-LRAARRV 443

This family consists of various amine oxidases, including maze polyamine oxidase (PAO) and various flavin containing monoamine oxidases (MAO). The aligned region includes the flavin binding site of these enzymes. The family also contains phytoene dehydrogenases and related enzymes. In vertebrates MAO plays an important role regulating the intracellular levels of amines via there oxidation; these include various neurotransmitters, neurotoxins and trace amines. In lower eukaryotes such as aspergillus and in bacteria the main role of amine oxidases is to provide a source of ammonium. PAOs in plants, bacteria and protozoa oxidase spermidine and spermine to an aminobutyral, diaminopropane and hydrogen peroxide and are involved in the catabolism of polyamines. Other members of this family include tryptophan 2-monooxygenase, putrescine oxidase, corticosteroid binding proteins and antibacterial glycoproteins. Length = 444

>gnl|CDD|215308 PLN02568, PLN02568, polyamine oxidase

 Score =  101 bits (252), Expect = 4e-23
 Identities = 76/300 (25%), Positives = 114/300 (38%), Gaps = 59/300 (19%)

Query: 96  KEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLIT----FVPSLPAQKLNA 151
           ++V +I+W+      +  +DGS  TA  +I+TV LGVLK+ +      F P LP  K +A
Sbjct: 261 RKVTRIEWQ-DEPVKLHFADGSTMTADHVIVTVSLGVLKAGIGEDSGLFSPPLPDFKTDA 319

Query: 152 IEGLNFGTVDKIFIRF--PAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILG 209
           I  L FG V+K+F+          +    F F      + D   +  H     W+     
Sbjct: 320 ISRLGFGVVNKLFVELSPRPDGSPEDVAKFPFLQMAFHRSD--SEARHDKIPWWMRRTAS 377

Query: 210 FYMDAEDPLTLLGWIAGPTARYMETLP--------MAVLQADIMRLFRHFLGGAYIIPEP 261
                ++   LL W AG  A  +E L            L + + R        ++ +   
Sbjct: 378 ICPIHKNSSVLLSWFAGKEALELEKLSDEEIIRGVQTTLSSFLKRRVAGLGSQSHPLCNG 437

Query: 262 ------------IRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCR 309
                       +++++S W  +P F GSYS+          +G SS         PL  
Sbjct: 438 GASSNDGSRWKFVKVLKSKWGTDPLFLGSYSYVA--------VG-SSGDDLDRMAEPL-- 486

Query: 310 RSYQPTSLRNGSDRLNTSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARE 369
                        R++        P         LLFAGEAT   HY T +GA  SG RE
Sbjct: 487 ------------PRISDHDQAGGPP-------LQLLFAGEATHRTHYSTTHGAYFSGLRE 527

Length = 539

>gnl|CDD|177909 PLN02268, PLN02268, probable polyamine oxidase

 Score = 99.4 bits (248), Expect = 9e-23
 Identities = 88/307 (28%), Positives = 115/307 (37%), Gaps = 96/307 (31%)

Query: 78  LLVSGQTPV------DLSNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLG 131
           L+V G  PV       L   I     V KI   Y NG  V+  DG+ + A   II VPLG
Sbjct: 195 LMVRGYDPVINTLAKGLD--IRLNHRVTKIVRRY-NGVKVTVEDGTTFVADAAIIAVPLG 251

Query: 132 VLKSKLITFVPSLPAQKLNAIEGLNFGTVDKIFIRFPAKWWKD------------GCQGF 179
           VLK+ +I F P LP  K  AI  L  G  +KI + F + +W +            GC  F
Sbjct: 252 VLKANIIKFEPELPEWKEEAISDLGVGIENKIALHFDSVFWPNVEFLGVVAPTSYGCSYF 311

Query: 180 NFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWIAGPTARYMETLPMAV 239
                    ++L K      G P    +L  YM            AG  AR +E L    
Sbjct: 312 ---------LNLHK----ATGHP----VL-VYM-----------PAGRLARDIEKLSDEA 342

Query: 240 LQADIMRLFRHFLGGAYIIPEPIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQ 299
                M   +  L  A    EP++ + S W  +P+  G YS+          +G+     
Sbjct: 343 AANFAMSQLKKMLPDA---TEPVQYLVSRWGSDPNSLGCYSYDL--------VGKP---- 387

Query: 300 RRPPRAPLCRRSYQPTSLRNGSDRLNTSAADLAAPVINREGRPVLLFAGEATSPHHYGTV 359
                  L  R                    L APV N      L FAGEATS    G+V
Sbjct: 388 -----HDLYER--------------------LRAPVDN------LFFAGEATSSDFPGSV 416

Query: 360 NGAVESG 366
           +GA  +G
Sbjct: 417 HGAYSTG 423

Length = 435

>gnl|CDD|178144 PLN02529, PLN02529, lysine-specific histone demethylase 1

 Score = 98.0 bits (244), Expect = 6e-22
 Identities = 83/297 (27%), Positives = 126/297 (42%), Gaps = 75/297 (25%)

Query: 92  ILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNA 151
           I Y K V+ I  +Y N      +   V+ A  ++ TVPLGVLK + I F P LP +KL A
Sbjct: 369 IFYGKTVDTI--KYGNDGVEVIAGSQVFQADMVLCTVPLGVLKKRTIRFEPELPRRKLAA 426

Query: 152 IEGLNFGTVDKIFIRFPAKWWKD-----GCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWG 206
           I+ L FG ++K+ + FP+ +W +     GC   N    ++ +  LF     V G P    
Sbjct: 427 IDRLGFGLLNKVAMVFPSVFWGEELDTFGC--LNESSNKRGEFFLFYGYHTVSGGP---- 480

Query: 207 ILGFYMDAEDPLTLLGWIAGPTARYMETLPMAVLQADIMRLFRHFLGGAYI-IPEPIRIV 265
                        L+  +AG  A+  E    + L   ++ + R       I +P+PI+ +
Sbjct: 481 ------------ALVALVAGEAAQRFENTDPSTLLHRVLSVLRGIYNPKGINVPDPIQTI 528

Query: 266 RSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLN 325
            + W  +P   GSYSH                                         R+ 
Sbjct: 529 CTRWGSDPLSYGSYSHV----------------------------------------RVQ 548

Query: 326 TSAAD---LAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVYLRR 379
           +S +D   LA  V  R     L FAGEAT+  +  T++GA  SG RE A+ I+++ R
Sbjct: 549 SSGSDYDILAESVSGR-----LFFAGEATTRQYPATMHGAFLSGLRE-ASRILHVAR 599

Length = 738

>gnl|CDD|215362 PLN02676, PLN02676, polyamine oxidase

 Score = 94.0 bits (234), Expect = 7e-21
 Identities = 83/290 (28%), Positives = 126/290 (43%), Gaps = 64/290 (22%)

Query: 88  LSNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQ 147
              ++   K V +I +  +NG  V   DGSVY A  +I++V LGVL+S LI F P LP  
Sbjct: 243 TDPRLKLNKVVREISYS-KNGVTVKTEDGSVYRAKYVIVSVSLGVLQSDLIKFKPPLPDW 301

Query: 148 KLNAIEGLNFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGI 207
           K+ AI   +     KIF++FP K+W  G  G  F+    ++   +            W  
Sbjct: 302 KIEAIYQFDMAVYTKIFLKFPYKFWPSG-PGTEFFLYAHERRGYYP----------FWQ- 349

Query: 208 LGFYMDAEDPLT--LLGWIAGPTARYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIV 265
              +++ E P +  L   +    +R +E  P +  +A+IM + R   G    IPE   I+
Sbjct: 350 ---HLENEYPGSNVLFVTVTDEESRRIEQQPDSETKAEIMEVLRKMFGPN--IPEATDIL 404

Query: 266 RSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLN 325
              W  N  F+GSYS+  P       +G S Y+  +                        
Sbjct: 405 VPRWWSNRFFKGSYSNW-P-------IGVSRYEFDQ------------------------ 432

Query: 326 TSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIV 375
                + APV    GR  + F GE TS  + G V+GA  +G  +TAN ++
Sbjct: 433 -----IRAPV----GR--VYFTGEHTSEKYNGYVHGAYLAGI-DTANDLL 470

Length = 487

>gnl|CDD|178578 PLN03000, PLN03000, amine oxidase

 Score = 93.2 bits (231), Expect = 2e-20
 Identities = 86/303 (28%), Positives = 124/303 (40%), Gaps = 71/303 (23%)

Query: 92  ILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNA 151
           ILY+K V  I +   NG  V   +  VY    ++ TVPLGVLK+  I FVP LP +KL+ 
Sbjct: 393 ILYEKTVQTIRYG-SNGVKVIAGN-QVYEGDMVLCTVPLGVLKNGSIKFVPELPQRKLDC 450

Query: 152 IEGLNFGTVDKIFIRFPAKWWKDGCQGFNFYW---TQQDKMDLFKDMVHVDGKPWVWGIL 208
           I+ L FG ++K+ + FP  +W      F         + +  LF     V G P      
Sbjct: 451 IKRLGFGLLNKVAMLFPYVFWSTDLDTFGHLTEDPNYRGEFFLFYSYAPVAGGP------ 504

Query: 209 GFYMDAEDPLTLLGWIAGPTARYMETLPMAVLQADIMRLFRHFLGGAY-----IIPEPIR 263
                      L+  +AG  A   ET+P      D +    H L G Y      +P+P++
Sbjct: 505 ----------LLIALVAGEAAHKFETMP----PTDAVTRVLHILRGIYEPQGINVPDPLQ 550

Query: 264 IVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDR 323
            V + W  +P   GSYS+          +G S                       +  D 
Sbjct: 551 TVCTRWGGDPFSLGSYSNVA--------VGASG----------------------DDYDI 580

Query: 324 LNTSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVYLRREGFF 383
           L  S  D         GR  L FAGEAT+  +  T++GA  +G RE AN     +  G  
Sbjct: 581 LAESVGD---------GR--LFFAGEATTRRYPATMHGAFVTGLREAANMAQSAKARGIR 629

Query: 384 EKL 386
           +++
Sbjct: 630 KRI 632

Length = 881

>gnl|CDD|215527 PLN02976, PLN02976, amine oxidase

 Score = 89.2 bits (221), Expect = 5e-19
 Identities = 74/274 (27%), Positives = 110/274 (40%), Gaps = 68/274 (24%)

Query: 111  VSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNAIEGLNFGTVDKIFIRFPAK 170
            VS S+GS +    ++ITVPLG LK++ I F P LP  K ++I+ L FG ++K+ + FP  
Sbjct: 976  VSTSNGSEFLGDAVLITVPLGCLKAETIKFSPPLPDWKYSSIQRLGFGVLNKVVLEFPEV 1035

Query: 171  WWKDGCQGFNFYWTQQDKMD---LFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWIAGP 227
            +W D    F     + D      +F ++    G P                 L+  + G 
Sbjct: 1036 FWDDSVDYFGATAEETDLRGQCFMFWNVKKTVGAP----------------VLIALVVGK 1079

Query: 228  TARYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVRSAWSINPHFRGSYSHHGPTQH 287
             A   +++  +      + + R   G A ++P+P+  V + W  +P   G+YS+      
Sbjct: 1080 AAIDGQSMSSSDHVNHALMVLRKLFGEA-LVPDPVASVVTDWGRDPFSYGAYSYVA---- 1134

Query: 288  QCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLNTSAADLAAPVINREGRPV---L 344
                +G S                Y         D L               GRPV   L
Sbjct: 1135 ----IGASG-------------EDY---------DIL---------------GRPVENCL 1153

Query: 345  LFAGEATSPHHYGTVNGAVESGARETANAIVYLR 378
             FAGEAT   H  TV GA+ SG RE    I  L 
Sbjct: 1154 FFAGEATCKEHPDTVGGAMMSGLREAVRIIDILN 1187

Length = 1713

>gnl|CDD|215187 PLN02328, PLN02328, lysine-specific histone demethylase 1 homolog

 Score = 80.0 bits (197), Expect = 5e-16
 Identities = 88/312 (28%), Positives = 128/312 (41%), Gaps = 74/312 (23%)

Query: 92  ILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNA 151
           I Y++ V  I   Y     +  + G  +    ++ TVPLGVLK   I F P LP +K +A
Sbjct: 449 IFYERTVESI--RYGVDGVIVYAGGQEFHGDMVLCTVPLGVLKKGSIEFYPELPQRKKDA 506

Query: 152 IEGLNFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMD----LFKDMVHVDGKPWVWGI 207
           I+ L +G ++K+ + FP  +W      F  + T+   M     LF     V G P     
Sbjct: 507 IQRLGYGLLNKVALLFPYNFWGGEIDTFG-HLTEDPSMRGEFFLFYSYSSVSGGP----- 560

Query: 208 LGFYMDAEDPLTLLGWIAGPTARYMETL-PMA----VLQADIMRLFRHFLGGAYIIPEPI 262
                       L+  +AG  A   ETL P+     VLQ  I+R   H  G   ++P+P+
Sbjct: 561 -----------LLIALVAGDAAVKFETLSPVESVKRVLQ--ILRGIFHPKG--IVVPDPV 605

Query: 263 RIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSD 322
           + V + W  +    GSYS+          +G S                       +  D
Sbjct: 606 QAVCTRWGKDCFTYGSYSYVA--------VGSSG----------------------DDYD 635

Query: 323 RLNTSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAI-VYLRREG 381
            L  S  D         GR  + FAGEAT+  +  T++GA  SG RE AN + V  RR  
Sbjct: 636 ILAESVGD---------GR--VFFAGEATNKQYPATMHGAFLSGMREAANILRVARRRSL 684

Query: 382 FFEKLVNIAVKE 393
             +  VN   +E
Sbjct: 685 CIDDKVNNDEEE 696

Length = 808

>gnl|CDD|224152 COG1231, COG1231, Monoamine oxidase [Amino acid transport and metabolism]

 Score = 62.5 bits (152), Expect = 1e-10
 Identities = 68/350 (19%), Positives = 110/350 (31%), Gaps = 81/350 (23%)

Query: 31  KDGCQGFNLYWTQQDKTDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLV----SGQTP- 85
           +D     +    +     L  D +          ++   +  E    +L       Q   
Sbjct: 158 RDPGARVSPGPIEPGDVSLLHDAL----PLRSASVVDRGIGGEIRTQMLQRLGGMDQLAE 213

Query: 86  ---VDLSNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVP 142
                L  +IL  + V +ID +  +G  V+  D   Y A  +++T+PL +L    I F P
Sbjct: 214 AFAKQLGTRILLNEPVRRID-QDGDGVTVTADDVGQYVADYVLVTIPLAILGQ--IDFAP 270

Query: 143 SLPAQKLNAIEGLNFGTVDKIFIRFPAKWW-KDGCQGFNFYWTQQDKMDLFKDMVHVDGK 201
            LPA+   A +G+ +G+  KI + F   +W + G  G           DL    +     
Sbjct: 271 LLPAEYKQAAKGVPYGSATKIGVAFSRPFWEEAGILGGESLT------DLGLGFISYPSA 324

Query: 202 PWVWG---ILGFYMDAEDPLTLLGWIAGPTARYMETLPMAVLQADIMRLFRHFLGGAYII 258
           P+  G   +LG Y              G  A  ++ LP A  +  ++       G     
Sbjct: 325 PFADGPGVLLGSYA------------FGDDALVIDALPEAERRQKVLARLAKLFGDEAAD 372

Query: 259 PEPIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLR 318
           P         WS +P   G  + + P Q                      R    PT   
Sbjct: 373 PFDYGASVD-WSKDPWTLGGTAAYPPGQ----------------------RTKLYPTL-- 407

Query: 319 NGSDRLNTSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGAR 368
                                    + FAG   +    G + GA+ SG R
Sbjct: 408 -------------------PAPHGRIHFAGTEHASEFGGWLEGAIRSGQR 438

Length = 450

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	412
KOG0685|consensus	498		100.0
PLN03000	881	amine oxidase	100.0
PLN02976	1713	amine oxidase	100.0
PLN02568	539	polyamine oxidase	100.0
PLN02676	487	polyamine oxidase	100.0
PLN02328	808	lysine-specific histone demethylase 1 homolog	100.0
PLN02529	738	lysine-specific histone demethylase 1	100.0
PLN02268	435	probable polyamine oxidase	100.0
COG1231	450	Monoamine oxidase [Amino acid transport and metabo	100.0
KOG0029|consensus	501		100.0
PF01593	450	Amino_oxidase: Flavin containing amine oxidoreduct	99.96
TIGR03467	419	HpnE squalene-associated FAD-dependent desaturase.	99.87
TIGR00562	462	proto_IX_ox protoporphyrinogen oxidase. This prote	99.87
TIGR02731	453	phytoene_desat phytoene desaturase. Plants and cya	99.86
PLN02576	496	protoporphyrinogen oxidase	99.86
PRK12416	463	protoporphyrinogen oxidase; Provisional	99.86
PLN02612	567	phytoene desaturase	99.83
PRK11883	451	protoporphyrinogen oxidase; Reviewed	99.81
PRK07233	434	hypothetical protein; Provisional	99.74
COG3380	331	Predicted NAD/FAD-dependent oxidoreductase [Genera	99.74
PLN02487	569	zeta-carotene desaturase	99.63
TIGR02732	474	zeta_caro_desat carotene 7,8-desaturase. Carotene	99.63
COG1232	444	HemY Protoporphyrinogen oxidase [Coenzyme metaboli	99.54
PRK07208	479	hypothetical protein; Provisional	99.53
KOG0685|consensus	498		99.51
TIGR02733	492	desat_CrtD C-3',4' desaturase CrtD. Members of thi	98.95
KOG1276|consensus	491		98.7
TIGR02734	502	crtI_fam phytoene desaturase. Phytoene is converte	98.65
TIGR02730	493	carot_isom carotene isomerase. Members of this fam	98.59
COG3349	485	Uncharacterized conserved protein [Function unknow	97.8
PLN02568	539	polyamine oxidase	97.13
COG2907	447	Predicted NAD/FAD-binding protein [General functio	97.0
PRK10015	429	oxidoreductase; Provisional	96.21
PRK10157	428	putative oxidoreductase FixC; Provisional	96.02
PLN02976	1713	amine oxidase	95.83
TIGR01984	382	UbiH 2-polyprenyl-6-methoxyphenol 4-hydroxylase. T	95.69
PF13738	203	Pyr_redox_3: Pyridine nucleotide-disulphide oxidor	95.26
PLN03000	881	amine oxidase	94.96
TIGR01988	385	Ubi-OHases Ubiquinone biosynthesis hydroxylase, Ub	94.93
PRK07364	415	2-octaprenyl-6-methoxyphenyl hydroxylase; Validate	94.72
PRK07494	388	2-octaprenyl-6-methoxyphenyl hydroxylase; Provisio	94.66
PLN02676	487	polyamine oxidase	94.13
PLN02529	738	lysine-specific histone demethylase 1	93.52
PRK08020	391	ubiF 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquin	93.39
PLN02328	808	lysine-specific histone demethylase 1 homolog	93.38
PRK08849	384	2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hy	93.3
KOG0029|consensus	501		93.09
KOG4254|consensus	561		92.74
PF13454	156	NAD_binding_9: FAD-NAD(P)-binding	92.38
COG2081	408	Predicted flavoproteins [General function predicti	92.25
PF01266	358	DAO: FAD dependent oxidoreductase; InterPro: IPR00	91.86
TIGR03197	381	MnmC_Cterm tRNA U-34 5-methylaminomethyl-2-thiouri	91.43
COG0579	429	Predicted dehydrogenase [General function predicti	90.95
PTZ00363	443	rab-GDP dissociation inhibitor; Provisional	90.4
PF03486	409	HI0933_like: HI0933-like protein; InterPro: IPR004	88.98
PRK07236	386	hypothetical protein; Provisional	88.44
PRK07588	391	hypothetical protein; Provisional	88.44
PF05834	374	Lycopene_cycl: Lycopene cyclase protein; InterPro:	88.23
TIGR00031	377	UDP-GALP_mutase UDP-galactopyranose mutase. The ge	88.23
TIGR03219	414	salicylate_mono salicylate 1-monooxygenase. Member	88.1
PRK06847	375	hypothetical protein; Provisional	87.53
PF07156	368	Prenylcys_lyase: Prenylcysteine lyase; InterPro: I	87.48
PRK09126	392	hypothetical protein; Provisional	86.79
COG0654	387	UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and	86.67
PRK05868	372	hypothetical protein; Validated	86.44
PRK05714	405	2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hy	85.95
TIGR01377	380	soxA_mon sarcosine oxidase, monomeric form. Sarcos	85.91
TIGR02352	337	thiamin_ThiO glycine oxidase ThiO. This family con	85.54
PRK07333	403	2-octaprenyl-6-methoxyphenyl hydroxylase; Provisio	85.45
PRK06753	373	hypothetical protein; Provisional	85.26
PTZ00383	497	malate:quinone oxidoreductase; Provisional	85.04
PRK08773	392	2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hy	85.04
PLN02268	435	probable polyamine oxidase	84.81
PRK05732	395	2-octaprenyl-6-methoxyphenyl hydroxylase; Validate	84.77
PRK11259	376	solA N-methyltryptophan oxidase; Provisional	84.5
PRK11728	393	hydroxyglutarate oxidase; Provisional	84.18
TIGR00275	400	flavoprotein, HI0933 family. The model when search	83.84
PRK06834	488	hypothetical protein; Provisional	83.8
COG1231	450	Monoamine oxidase [Amino acid transport and metabo	83.44
COG1233	487	Phytoene dehydrogenase and related proteins [Secon	83.39
PRK07190	487	hypothetical protein; Provisional	83.09
PRK08013	400	oxidoreductase; Provisional	82.66
PRK08850	405	2-octaprenyl-6-methoxyphenol hydroxylase; Validate	82.35
PLN02172	461	flavin-containing monooxygenase FMO GS-OX	81.97
PRK08163	396	salicylate hydroxylase; Provisional	81.81
PRK09897	534	hypothetical protein; Provisional	81.38
PRK06116	450	glutathione reductase; Validated	81.13
PRK01747	662	mnmC bifunctional tRNA (mnm(5)s(2)U34)-methyltrans	81.07
COG2509	486	Uncharacterized FAD-dependent dehydrogenases [Gene	81.03

>KOG0685|consensus

Probab=100.00  E-value=6.4e-44  Score=346.61  Aligned_cols=250  Identities=41%  Similarity=0.678  Sum_probs=216.4

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChhhhhcCcc-cccCCCcHHHHHHHhcCCCcceeEEEEEc
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLI-TFVPSLPAQKLNAIEGLNFGTVDKIFIRF  167 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~~L~~~~i-~f~P~Lp~~k~~ai~~l~~g~~~KV~l~f  167 (412)
                      .++|+++++|.+|.++..+.|+|++.||+.+.||+||||+|+++|++..- .|.|+||..|++||+++++|+..|+||+|
T Consensus       243 ~~~~~~~~rv~~I~~~~~~~v~l~c~dg~v~~adhVIvTvsLGvLk~~h~~lF~P~LP~~K~~AIe~lgfGtv~KiFLE~  322 (498)
T KOG0685|consen  243 WKRIHLNTRVENINWKNTGEVKLRCSDGEVFHADHVIVTVSLGVLKEQHHKLFVPPLPAEKQRAIERLGFGTVNKIFLEF  322 (498)
T ss_pred             hhhhcccccceeeccCCCCcEEEEEeCCcEEeccEEEEEeechhhhhhhhhhcCCCCCHHHHHHHHhccCCccceEEEEc
Confidence            46788889999999955578999999999999999999999999998543 89999999999999999999999999999


Q ss_pred             CCCccCCCCCceeEeecCCCccccccccccCCCCCccccccceeecCCCCcEEEEEecccchHHHhcCCHHHHHHHHHHH
Q psy10795        168 PAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWIAGPTARYMETLPMAVLQADIMRL  247 (412)
Q Consensus       168 ~~~fW~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~w~~~~~~~~~~~~~~~vL~~~~~g~~a~~~~~lsdeel~~~~l~~  247 (412)
                      ++|||+.++.++.++|.+.++..++..     ...|...++.+.+.+..+.+|++|++|..++.++.++|||+.+.+...
T Consensus       323 E~pfwp~~~~~i~~lw~~e~l~e~r~~-----~~~w~~~~~~f~~v~~~~~vL~gWiaG~~~~~me~lsdEev~e~~~~~  397 (498)
T KOG0685|consen  323 EEPFWPSDWNGIQLLWLDEDLEELRST-----LDAWEEDIMGFQPVSWAPNVLLGWIAGREARHMETLSDEEVLEGLTKL  397 (498)
T ss_pred             cCCCCCCCCceeEEEEecCcHHHHhhh-----hHHHHhhceEEEEcCcchhhhheeccCCcceehhhCCHHHHHHHHHHH
Confidence            999999999999999988875555433     356888888888877777899999999999999999999999999999


Q ss_pred             HHHHhCCCCCCCCCcEEEeecCCCCCCCccccCCCCCccccccccCcccccCCCCCCCCCccccccCCCccCCCCccCcc
Q psy10795        248 FRHFLGGAYIIPEPIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLNTS  327 (412)
Q Consensus       248 L~~~~g~~~~~~~~~~~~~~~W~~dp~~~G~ys~~~pg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~  327 (412)
                      |++++++ ..+|+|.++.+++|.++||++|||||..+|+                            .|       .+..
T Consensus       398 lr~fl~n-~~iP~p~kilRs~W~snp~frGSYSY~svgs----------------------------~~-------~d~~  441 (498)
T KOG0685|consen  398 LRKFLKN-PEIPKPKKILRSQWISNPFFRGSYSYRSVGS----------------------------DG-------SDTG  441 (498)
T ss_pred             HHHhcCC-CCCCCchhhhhhcccCCCccCceeeEeeccc----------------------------cc-------cccc
Confidence            9999994 5799999999999999999999999995542                            22       1122


Q ss_pred             hHHhccccccCCCCceEEEecccccCcCcccchhhhhccHHHHHHHHHHHHh
Q psy10795        328 AADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVYLRR  379 (412)
Q Consensus       328 ~~~l~~p~~~~~~~~~l~fAGe~t~~~~~g~~eGA~~SG~raA~~i~~~l~~  379 (412)
                      .-++..|..+.+++|.|.||||||+..+++|+|||++||.|+|+++++.+..
T Consensus       442 ~~a~p~p~~~~~~~p~I~FAGEaThr~~YsTthGA~~SG~REA~RL~~~y~~  493 (498)
T KOG0685|consen  442 ALALPLPLTLVTGRPQILFAGEATHRTFYSTTHGAVLSGWREADRLLEHYES  493 (498)
T ss_pred             hhhccCCccccCCCceEEEccccccccceehhhhhHHhhHHHHHHHHHHHHh
Confidence            3334445545567889999999999999999999999999999999996654

>PLN03000 amine oxidase

Probab=100.00  E-value=2.9e-40  Score=348.75  Aligned_cols=254  Identities=30%  Similarity=0.448  Sum_probs=207.6

Q ss_pred             eccCCcceeeecCCcCCCCCCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChhhhhcCcccccCCCcHHHH
Q psy10795         70 MDAEDPLTLLVSGQTPVDLSNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKL  149 (412)
Q Consensus        70 ~v~~~p~vl~~~~~~~~~~~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~~L~~~~i~f~P~Lp~~k~  149 (412)
                      .+.+....|..++++.+    .|+||++|++|++ ++++|+|++.+ ++++||+||||+|+++|++..|.|.|+||+.|.
T Consensus       375 ~v~GG~~~LieaLa~~L----~I~Ln~~Vt~I~~-~~dgV~V~~~~-~~~~AD~VIvTVPlgVLk~~~I~F~PpLP~~K~  448 (881)
T PLN03000        375 FLPGGNGRLVQALAENV----PILYEKTVQTIRY-GSNGVKVIAGN-QVYEGDMVLCTVPLGVLKNGSIKFVPELPQRKL  448 (881)
T ss_pred             EeCCCHHHHHHHHHhhC----CcccCCcEEEEEE-CCCeEEEEECC-cEEEeceEEEcCCHHHHhhCceeeCCCCCHHHH
Confidence            34444445666666666    3999999999999 88899998765 489999999999999999777999999999999


Q ss_pred             HHHhcCCCcceeEEEEEcCCCccCCCCCceeEeecCCCccccccccccCCCCCccccccceeecCCCCcEEEEEecccch
Q psy10795        150 NAIEGLNFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWIAGPTA  229 (412)
Q Consensus       150 ~ai~~l~~g~~~KV~l~f~~~fW~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~w~~~~~~~~~~~~~~~vL~~~~~g~~a  229 (412)
                      +||++++||.+.||++.|+++||+.+...|++++.+...   .+        .|.. .+++.+.. +..+|++|++|+.|
T Consensus       449 ~AI~rL~~G~l~KViL~Fd~~FW~~d~~~FG~l~~~~~~---rg--------~~~~-f~s~sp~~-G~pVLvafv~Gd~A  515 (881)
T PLN03000        449 DCIKRLGFGLLNKVAMLFPYVFWSTDLDTFGHLTEDPNY---RG--------EFFL-FYSYAPVA-GGPLLIALVAGEAA  515 (881)
T ss_pred             HHHHcCCCcceEEEEEEeCCccccCCCCceeEEecCCCC---Cc--------eeEE-EeCCCCCC-CCcEEEEEecCchh
Confidence            999999999999999999999999876777776443321   11        1111 12222222 34589999999999


Q ss_pred             HHHhcCCHHHHHHHHHHHHHHHhCCC-CCCCCCcEEEeecCCCCCCCccccCCCCCccccccccCcccccCCCCCCCCCc
Q psy10795        230 RYMETLPMAVLQADIMRLFRHFLGGA-YIIPEPIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLC  308 (412)
Q Consensus       230 ~~~~~lsdeel~~~~l~~L~~~~g~~-~~~~~~~~~~~~~W~~dp~~~G~ys~~~pg~~~~~~~~~~~~~~~~~~~~p~~  308 (412)
                      ..++.++++++++.++++|+++|+.. ..+++|..+.+++|.+|||++|+|+++.||+.                     
T Consensus       516 ~~le~lSdeE~ve~vl~~Lrkifg~~~~~vp~Pv~~ivtrW~~DPysrGSYS~~~pG~~---------------------  574 (881)
T PLN03000        516 HKFETMPPTDAVTRVLHILRGIYEPQGINVPDPLQTVCTRWGGDPFSLGSYSNVAVGAS---------------------  574 (881)
T ss_pred             HHhhcCCHHHHHHHHHHHHHHHhCccccccCCceEEEEccCCCCCCCCccccCCCCCCc---------------------
Confidence            99999999999999999999999731 23578999999999999999999999977642                     


Q ss_pred             cccccCCCccCCCCccCcchHHhccccccCCCCceEEEecccccCcCcccchhhhhccHHHHHHHHHHHHhcchh
Q psy10795        309 RRSYQPTSLRNGSDRLNTSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVYLRREGFF  383 (412)
Q Consensus       309 ~~~~~~~g~~~~~~~~~~~~~~l~~p~~~~~~~~~l~fAGe~t~~~~~g~~eGA~~SG~raA~~i~~~l~~~~~~  383 (412)
                                      ..+++.|++|+.+    +|||||||||+..|+||||||++||+|||++|++.++.....
T Consensus       575 ----------------~~~~d~LaePv~~----GRIfFAGEaTs~~~~GTVhGAieSGlRAA~eIl~~l~~~~~~  629 (881)
T PLN03000        575 ----------------GDDYDILAESVGD----GRLFFAGEATTRRYPATMHGAFVTGLREAANMAQSAKARGIR  629 (881)
T ss_pred             ----------------hHHHHHHhCcCCC----CcEEEeehHHhCCCCeeHHHHHHHHHHHHHHHHHHhhhccCC
Confidence                            1467889999842    499999999999999999999999999999999998876443

>PLN02976 amine oxidase

Probab=100.00  E-value=2.8e-40  Score=356.43  Aligned_cols=273  Identities=26%  Similarity=0.410  Sum_probs=217.3

Q ss_pred             CcceeeecCCcCCCCCCcEEcCCeEEEEEec---------CCCcEEEEeCCCcEEEeCEEEEeCChhhhhcCcccccCCC
Q psy10795         74 DPLTLLVSGQTPVDLSNKILYKKEVNKIDWE---------YQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSL  144 (412)
Q Consensus        74 ~p~vl~~~~~~~~~~~~~I~ln~~V~~I~~~---------~~~~V~V~~~~G~~~~ad~VIvTvP~~~L~~~~i~f~P~L  144 (412)
                      ....|..+++..+    .|+||++|++|.+.         .+++|.|++.+|++++||+||||+|+++|+...|.|.|+|
T Consensus       934 GYqqLIeALAe~L----~IrLNtpVtrId~s~~d~~~~~s~~dGVtVtTsDGetftADaVIVTVPLGVLKag~I~FsPPL 1009 (1713)
T PLN02976        934 GYSNVVESLAEGL----DIHLNHVVTDVSYGSKDAGASGSSRKKVKVSTSNGSEFLGDAVLITVPLGCLKAETIKFSPPL 1009 (1713)
T ss_pred             CHHHHHHHHHhhC----CeecCCeEEEEEecCCcccccccCCCcEEEEECCCCEEEeceEEEeCCHHHhhhcccccCCcc
Confidence            3334555566655    49999999999982         1467999999999999999999999999997668999999


Q ss_pred             cHHHHHHHhcCCCcceeEEEEEcCCCccCCCCCceeEeecCCCccccccccccCCCCCccccccceeecCCCCcEEEEEe
Q psy10795        145 PAQKLNAIEGLNFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWI  224 (412)
Q Consensus       145 p~~k~~ai~~l~~g~~~KV~l~f~~~fW~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~w~~~~~~~~~~~~~~~vL~~~~  224 (412)
                      |+.+++||++++||...||+|.|+++||+.+...|+..+.+.+.   .|       ..|.  .++... +.+.++|++|+
T Consensus      1010 Pe~KqaAIqrLgfG~lnKV~LeFdrpFW~~d~d~FG~s~edtdl---rG-------~~~~--~wnlr~-psG~pVLVafv 1076 (1713)
T PLN02976       1010 PDWKYSSIQRLGFGVLNKVVLEFPEVFWDDSVDYFGATAEETDL---RG-------QCFM--FWNVKK-TVGAPVLIALV 1076 (1713)
T ss_pred             cHHHHHHHHhhccccceEEEEEeCCccccCCCCccccccccCCC---Cc-------eEEE--eccCCC-CCCCCEEEEEe
Confidence            99999999999999999999999999999765566544322211   11       1111  222222 23446899999


Q ss_pred             cccchHHHhcCCHHHHHHHHHHHHHHHhCCCCCCCCCcEEEeecCCCCCCCccccCCCCCccccccccCcccccCCCCCC
Q psy10795        225 AGPTARYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPR  304 (412)
Q Consensus       225 ~g~~a~~~~~lsdeel~~~~l~~L~~~~g~~~~~~~~~~~~~~~W~~dp~~~G~ys~~~pg~~~~~~~~~~~~~~~~~~~  304 (412)
                      .|..|..+..++++++++.+++.|+++||. ...+.|..+.+++|..|||++|+|++..||+.                 
T Consensus      1077 ~G~aAreiEsLSDEE~Ve~ALe~LrKlFG~-~~iPdPv~~vvTrWssDPySrGSYSy~~PGs~----------------- 1138 (1713)
T PLN02976       1077 VGKAAIDGQSMSSSDHVNHALMVLRKLFGE-ALVPDPVASVVTDWGRDPFSYGAYSYVAIGAS----------------- 1138 (1713)
T ss_pred             ccHhHHHHhhCCHHHHHHHHHHHHHHHcCc-ccccCcceeEEecCCCCCCcCccccCCCCCCC-----------------
Confidence            999999999999999999999999999994 24578999999999999999999999876641                 


Q ss_pred             CCCccccccCCCccCCCCccCcchHHhccccccCCCCceEEEecccccCcCcccchhhhhccHHHHHHHHHHHHhcc---
Q psy10795        305 APLCRRSYQPTSLRNGSDRLNTSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVYLRREG---  381 (412)
Q Consensus       305 ~p~~~~~~~~~g~~~~~~~~~~~~~~l~~p~~~~~~~~~l~fAGe~t~~~~~g~~eGA~~SG~raA~~i~~~l~~~~---  381 (412)
                                          ...+..|++|+++     +||||||||+..|+||||||++||+|||++|+..|...+   
T Consensus      1139 --------------------~~d~d~LAePVgg-----RLFFAGEATS~~~pGTVHGAIeSG~RAA~eIL~~L~~G~~~~ 1193 (1713)
T PLN02976       1139 --------------------GEDYDILGRPVEN-----CLFFAGEATCKEHPDTVGGAMMSGLREAVRIIDILNTGNDYT 1193 (1713)
T ss_pred             --------------------chHHHHHhCCCCC-----cEEEEehhhhCCCcchHHHHHHHHHHHHHHHHHHHHccCccc
Confidence                                1356789999973     799999999999999999999999999999999997653   


Q ss_pred             hhhHHHHhHHhhhhhcCceecceee
Q psy10795        382 FFEKLVNIAVKELEHKGNQVGRILN  406 (412)
Q Consensus       382 ~~~~~~~~~~~~~~~~~~~~~~~~~  406 (412)
                      +..+....+....+...+.|..++|
T Consensus      1194 ~~~~~~~~~~~~~~~~~~e~~~~~~ 1218 (1713)
T PLN02976       1194 AEVEALETAQRHSESERDEVRDITK 1218 (1713)
T ss_pred             cHHHHHHHhhhhhhhhHHHHHHHHH
Confidence            3355556666666666666655554

>PLN02568 polyamine oxidase

Probab=100.00  E-value=2.4e-39  Score=334.19  Aligned_cols=266  Identities=27%  Similarity=0.386  Sum_probs=206.6

Q ss_pred             eccCCcceeeecCCcCCCCCCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChhhhhcC----cccccCCCc
Q psy10795         70 MDAEDPLTLLVSGQTPVDLSNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSK----LITFVPSLP  145 (412)
Q Consensus        70 ~v~~~p~vl~~~~~~~~~~~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~~L~~~----~i~f~P~Lp  145 (412)
                      .+.+....|..+++..++ ++.|+||++|++|++ .+++|+|++.+|+++.||+||+|+|+++|++.    .|.|.|+||
T Consensus       236 ~i~gG~~~Li~~La~~L~-~~~I~ln~~V~~I~~-~~~~v~V~~~dG~~~~aD~VIvTvPl~vL~~~~~~~~i~F~P~LP  313 (539)
T PLN02568        236 TIAKGYLSVIEALASVLP-PGTIQLGRKVTRIEW-QDEPVKLHFADGSTMTADHVIVTVSLGVLKAGIGEDSGLFSPPLP  313 (539)
T ss_pred             EECCcHHHHHHHHHhhCC-CCEEEeCCeEEEEEE-eCCeEEEEEcCCCEEEcCEEEEcCCHHHHhhccccccceecCCCC
Confidence            343433345555666553 457999999999999 88899999999989999999999999999964    258999999


Q ss_pred             HHHHHHHhcCCCcceeEEEEEcCCCccCCC-----CCceeEeecCCCccccccccccCCCCCccccccceeecCCCCcEE
Q psy10795        146 AQKLNAIEGLNFGTVDKIFIRFPAKWWKDG-----CQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTL  220 (412)
Q Consensus       146 ~~k~~ai~~l~~g~~~KV~l~f~~~fW~~~-----~~~~~~~~~~~~~~~~~g~~~~~~~~~w~~~~~~~~~~~~~~~vL  220 (412)
                      +.|++||++++||.+.||++.|+++||...     ...+.+++.+.+.. ..+.    ....|...++++++...++.+|
T Consensus       314 ~~k~~Ai~~l~~g~~~Ki~l~f~~~fW~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~vL  388 (539)
T PLN02568        314 DFKTDAISRLGFGVVNKLFVELSPRPDGSPEDVAKFPFLQMAFHRSDSE-ARHD----KIPWWMRRTASICPIHKNSSVL  388 (539)
T ss_pred             HHHHHHHHhcCCceeeEEEEEecCCCCCcccccccccceeeeecccchh-hhcc----cccchhhccccccccCCCCCEE
Confidence            999999999999999999999999998641     22233333322110 0000    0224655555555444456799


Q ss_pred             EEEecccchHHHhcCCHHHHHHHHHHHHHHHhCCCCC--------------------CCCCcEEEeecCCCCCCCccccC
Q psy10795        221 LGWIAGPTARYMETLPMAVLQADIMRLFRHFLGGAYI--------------------IPEPIRIVRSAWSINPHFRGSYS  280 (412)
Q Consensus       221 ~~~~~g~~a~~~~~lsdeel~~~~l~~L~~~~g~~~~--------------------~~~~~~~~~~~W~~dp~~~G~ys  280 (412)
                      ++|++|+.|.+++.++++++++.+++.|+++||....                    .+.|..+..++|.+|||++|+|+
T Consensus       389 ~~~~~G~~A~~~e~l~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~t~W~~dp~~~GsYs  468 (539)
T PLN02568        389 LSWFAGKEALELEKLSDEEIIRGVQTTLSSFLKRRVAGLGSQSHPLCNGGASSNDGSRWKFVKVLKSKWGTDPLFLGSYS  468 (539)
T ss_pred             EEEeccHHHHHHHcCCHHHHHHHHHHHHHHHcCCcccCcccccccccccccccccccCCCCceEEeCCCCCCCccCCccC
Confidence            9999999999999999999999999999999984211                    24689999999999999999999


Q ss_pred             CCCCccccccccCcccccCCCCCCCCCccccccCCCccCCCCccCcchHHhccccccC-------CCCceEEEecccccC
Q psy10795        281 HHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLNTSAADLAAPVINR-------EGRPVLLFAGEATSP  353 (412)
Q Consensus       281 ~~~pg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~~~~l~~p~~~~-------~~~~~l~fAGe~t~~  353 (412)
                      +..||+.                                     ..+++.|++|+.+.       ...++||||||||+.
T Consensus       469 ~~~~g~~-------------------------------------~~~~~~La~P~~~~~~~~~~~~~~~~l~FAGEat~~  511 (539)
T PLN02568        469 YVAVGSS-------------------------------------GDDLDRMAEPLPRISDHDQAGGPPLQLLFAGEATHR  511 (539)
T ss_pred             CCcCCCC-------------------------------------hhHHHHHhCccccccccccccCCCccEEEeecccCC
Confidence            8866531                                     13567999998510       112389999999999


Q ss_pred             cCcccchhhhhccHHHHHHHHHHHHh
Q psy10795        354 HHYGTVNGAVESGARETANAIVYLRR  379 (412)
Q Consensus       354 ~~~g~~eGA~~SG~raA~~i~~~l~~  379 (412)
                      .|+||||||++||+|||++|++.++.
T Consensus       512 ~~~~Tv~GA~~SG~RaA~~i~~~~~~  537 (539)
T PLN02568        512 THYSTTHGAYFSGLREANRLLQHYKC  537 (539)
T ss_pred             CccchHHHHHHHHHHHHHHHHHHhcc
Confidence            99999999999999999999998653

>PLN02676 polyamine oxidase

Probab=100.00  E-value=3.5e-39  Score=330.49  Aligned_cols=231  Identities=31%  Similarity=0.509  Sum_probs=192.2

Q ss_pred             CcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChhhhhcCcccccCCCcHHHHHHHhcCCCcceeEEEEEcCC
Q psy10795         90 NKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNAIEGLNFGTVDKIFIRFPA  169 (412)
Q Consensus        90 ~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~~L~~~~i~f~P~Lp~~k~~ai~~l~~g~~~KV~l~f~~  169 (412)
                      ++|+||++|++|++ ++++|+|++.+|++++||+||||+|+++|++..|.|+|+||+.++++|++++||...||++.|++
T Consensus       245 ~~I~l~~~V~~I~~-~~~gV~V~~~~G~~~~a~~VIvtvPl~vLk~~~I~F~P~LP~~k~~ai~~l~~g~~~Kv~l~f~~  323 (487)
T PLN02676        245 PRLKLNKVVREISY-SKNGVTVKTEDGSVYRAKYVIVSVSLGVLQSDLIKFKPPLPDWKIEAIYQFDMAVYTKIFLKFPY  323 (487)
T ss_pred             CceecCCEeeEEEE-cCCcEEEEECCCCEEEeCEEEEccChHHhccCceEEeCCCCHHHHHHHHhCCceeeEEEEEEeCC
Confidence            57999999999999 88899999999999999999999999999987789999999999999999999999999999999


Q ss_pred             CccCCCCCceeEeecCCCccccccccccCCCCCccccccceeecCCCCcEEEEEecccchHHHhcCCHHHHHHHHHHHHH
Q psy10795        170 KWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWIAGPTARYMETLPMAVLQADIMRLFR  249 (412)
Q Consensus       170 ~fW~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~w~~~~~~~~~~~~~~~vL~~~~~g~~a~~~~~lsdeel~~~~l~~L~  249 (412)
                      +||+++.....++..+.+.    +.     ...|..  ++  ...++.++|++|+.|+.+.++..++++++.+.+++.|+
T Consensus       324 ~FW~~~~~~~~~~~~~~~~----~~-----~~~~~~--~~--~~~~~~~~l~~~~~g~~a~~~~~~s~e~~~~~vl~~L~  390 (487)
T PLN02676        324 KFWPSGPGTEFFLYAHERR----GY-----YPFWQH--LE--NEYPGSNVLFVTVTDEESRRIEQQPDSETKAEIMEVLR  390 (487)
T ss_pred             CCCCCCCCceeeeeecccc----cc-----chhhhh--cc--cCCCCCCEEEEEechHHHHHHHhCCHHHHHHHHHHHHH
Confidence            9998742222222222110    00     112321  11  11123358889999999999999999999999999999


Q ss_pred             HHhCCCCCCCCCcEEEeecCCCCCCCccccCCCCCccccccccCcccccCCCCCCCCCccccccCCCccCCCCccCcchH
Q psy10795        250 HFLGGAYIIPEPIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLNTSAA  329 (412)
Q Consensus       250 ~~~g~~~~~~~~~~~~~~~W~~dp~~~G~ys~~~pg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~~~  329 (412)
                      ++||.  .++.|..+..++|.+|||++|+|+++.||+.                                     ....+
T Consensus       391 ~~~g~--~~~~p~~~~~~~W~~dp~s~Gsys~~~pG~~-------------------------------------~~~~~  431 (487)
T PLN02676        391 KMFGP--NIPEATDILVPRWWSNRFFKGSYSNWPIGVS-------------------------------------RYEFD  431 (487)
T ss_pred             HHhCC--CCCCcceEEecccCCCCCCCcccCCCCCCCC-------------------------------------hhHHH
Confidence            99985  5678999999999999999999999866641                                     13467


Q ss_pred             HhccccccCCCCceEEEecccccCcCcccchhhhhccHHHHHHHHHHHHh
Q psy10795        330 DLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVYLRR  379 (412)
Q Consensus       330 ~l~~p~~~~~~~~~l~fAGe~t~~~~~g~~eGA~~SG~raA~~i~~~l~~  379 (412)
                      .|++|++      |||||||||+..|+||||||++||+|||++|++.++.
T Consensus       432 ~L~~P~g------ri~FAGe~ts~~~~g~~eGA~~SG~RaA~~I~~~l~~  475 (487)
T PLN02676        432 QIRAPVG------RVYFTGEHTSEKYNGYVHGAYLAGIDTANDLLECIKK  475 (487)
T ss_pred             HHhCCCC------ceEEeccccccccccchHHHHHHHHHHHHHHHHHhcc
Confidence            8999995      9999999999999999999999999999999998765

>PLN02328 lysine-specific histone demethylase 1 homolog

Probab=100.00  E-value=1.2e-37  Score=329.28  Aligned_cols=251  Identities=27%  Similarity=0.405  Sum_probs=203.9

Q ss_pred             eccCCcceeeecCCcCCCCCCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChhhhhcCcccccCCCcHHHH
Q psy10795         70 MDAEDPLTLLVSGQTPVDLSNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKL  149 (412)
Q Consensus        70 ~v~~~p~vl~~~~~~~~~~~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~~L~~~~i~f~P~Lp~~k~  149 (412)
                      .+.+....|..+++..+    .|+||++|++|.+ .+++|.| +.+|+++.||+||||+|+++|++..|.|.|+||+.++
T Consensus       431 ~v~GG~~~Li~aLa~~L----~I~ln~~V~~I~~-~~dgV~V-~~~G~~~~AD~VIvTvPl~vLk~~~I~F~P~LP~~K~  504 (808)
T PLN02328        431 FIPGGNDTFVRELAKDL----PIFYERTVESIRY-GVDGVIV-YAGGQEFHGDMVLCTVPLGVLKKGSIEFYPELPQRKK  504 (808)
T ss_pred             EECCcHHHHHHHHHhhC----CcccCCeeEEEEE-cCCeEEE-EeCCeEEEcCEEEECCCHHHHhhcccccCCCCCHHHH
Confidence            34344445666666665    3999999999999 8888988 4577899999999999999999777899999999999


Q ss_pred             HHHhcCCCcceeEEEEEcCCCccCCCCCceeEeecCCCccccccccccCCCCCccccccceeecCCCCcEEEEEecccch
Q psy10795        150 NAIEGLNFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWIAGPTA  229 (412)
Q Consensus       150 ~ai~~l~~g~~~KV~l~f~~~fW~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~w~~~~~~~~~~~~~~~vL~~~~~g~~a  229 (412)
                      ++|++++|+++.||+|.|+++||+.+...++++..+...   .|.      ..+.   +++.... +..+|++|++|+.+
T Consensus       505 ~AI~~l~yG~~~KV~L~F~~~FW~~~~d~fG~l~~d~s~---rG~------~~lf---~s~s~~~-G~~vLvafv~G~~A  571 (808)
T PLN02328        505 DAIQRLGYGLLNKVALLFPYNFWGGEIDTFGHLTEDPSM---RGE------FFLF---YSYSSVS-GGPLLIALVAGDAA  571 (808)
T ss_pred             HHHHcCCCcceEEEEEEeCCccccCCCCceEEEeecCCC---Cce------EEEE---ecCCCCC-CCcEEEEEecChhh
Confidence            999999999999999999999998766667766443221   121      0111   1222222 34689999999999


Q ss_pred             HHHhcCCHHHHHHHHHHHHHHHhCCC-CCCCCCcEEEeecCCCCCCCccccCCCCCccccccccCcccccCCCCCCCCCc
Q psy10795        230 RYMETLPMAVLQADIMRLFRHFLGGA-YIIPEPIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLC  308 (412)
Q Consensus       230 ~~~~~lsdeel~~~~l~~L~~~~g~~-~~~~~~~~~~~~~W~~dp~~~G~ys~~~pg~~~~~~~~~~~~~~~~~~~~p~~  308 (412)
                      ..+..++++++++.++++|+++|+.. ...+.|..+.+++|.+|||++|+|+++.||++                     
T Consensus       572 ~~~e~lsdeE~v~~vL~~Lr~ifgp~~~~vp~P~~~~vtrW~~DP~s~GSYS~~~pG~~---------------------  630 (808)
T PLN02328        572 VKFETLSPVESVKRVLQILRGIFHPKGIVVPDPVQAVCTRWGKDCFTYGSYSYVAVGSS---------------------  630 (808)
T ss_pred             HHHhcCCHHHHHHHHHHHHHHHhCcccccccCcceEEEecCCCCCCcCCCCCCCCCCCc---------------------
Confidence            99999999999999999999999731 13568999999999999999999999977642                     


Q ss_pred             cccccCCCccCCCCccCcchHHhccccccCCCCceEEEecccccCcCcccchhhhhccHHHHHHHHHHHHhc
Q psy10795        309 RRSYQPTSLRNGSDRLNTSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVYLRRE  380 (412)
Q Consensus       309 ~~~~~~~g~~~~~~~~~~~~~~l~~p~~~~~~~~~l~fAGe~t~~~~~g~~eGA~~SG~raA~~i~~~l~~~  380 (412)
                                      ..+++.|++|+.+    +|||||||||+..++||||||++||+|||++|+..++.+
T Consensus       631 ----------------~~~~~~LaePv~~----GRL~FAGEaTs~~~~GtVhGAi~SGlRAA~eIl~~~~~~  682 (808)
T PLN02328        631 ----------------GDDYDILAESVGD----GRVFFAGEATNKQYPATMHGAFLSGMREAANILRVARRR  682 (808)
T ss_pred             ----------------hhHHHHHhccCCC----CCEEEEEhhHhCCCCeEhHHHHHHHHHHHHHHHHHHhhc
Confidence                            1346788999742    499999999999999999999999999999999998876

>PLN02529 lysine-specific histone demethylase 1

Probab=100.00  E-value=2.7e-37  Score=325.22  Aligned_cols=243  Identities=30%  Similarity=0.490  Sum_probs=196.1

Q ss_pred             ceeeecCCcCCCCCCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChhhhhcCcccccCCCcHHHHHHHhcC
Q psy10795         76 LTLLVSGQTPVDLSNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNAIEGL  155 (412)
Q Consensus        76 ~vl~~~~~~~~~~~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~~L~~~~i~f~P~Lp~~k~~ai~~l  155 (412)
                      ..+..+++..+    .|+||++|++|++ ++++|+|++. ++++.||+||||+|+++|++..|.|.|+||+.|++||+++
T Consensus       357 ~~Li~aLA~~L----~IrLnt~V~~I~~-~~dGVtV~t~-~~~~~AD~VIVTVPlgVLk~~~I~F~PpLP~~K~~AI~rL  430 (738)
T PLN02529        357 WRLINALCEGV----PIFYGKTVDTIKY-GNDGVEVIAG-SQVFQADMVLCTVPLGVLKKRTIRFEPELPRRKLAAIDRL  430 (738)
T ss_pred             HHHHHHHHhcC----CEEcCCceeEEEE-cCCeEEEEEC-CEEEEcCEEEECCCHHHHHhccccCCCCCCHHHHHHHHcC
Confidence            34555566654    5999999999999 8889999864 4589999999999999999766899999999999999999


Q ss_pred             CCcceeEEEEEcCCCccCCCCCceeEeecCCCccccccccccCCCCCccccccceeecCCCCcEEEEEecccchHHHhcC
Q psy10795        156 NFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWIAGPTARYMETL  235 (412)
Q Consensus       156 ~~g~~~KV~l~f~~~fW~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~w~~~~~~~~~~~~~~~vL~~~~~g~~a~~~~~l  235 (412)
                      +|+++.||+|.|+++||+.+...++++..+...   .+        .|.. .++....+++ .+|++|++|+.|..+..+
T Consensus       431 ~yG~v~KV~L~F~~~FW~~~~~~fG~l~~~~~~---~g--------~~~~-~~~~~~~~gg-pvLvafv~G~~A~~le~l  497 (738)
T PLN02529        431 GFGLLNKVAMVFPSVFWGEELDTFGCLNESSNK---RG--------EFFL-FYGYHTVSGG-PALVALVAGEAAQRFENT  497 (738)
T ss_pred             CCceeEEEEEEeCCccccCCCCceEEEeccCCC---Cc--------eEEE-EecCCCCCCC-CEEEEEECchhhHHHhcC
Confidence            999999999999999998765566655322211   01        1211 1122222223 589999999999999999


Q ss_pred             CHHHHHHHHHHHHHHHhCCC-CCCCCCcEEEeecCCCCCCCccccCCCCCccccccccCcccccCCCCCCCCCccccccC
Q psy10795        236 PMAVLQADIMRLFRHFLGGA-YIIPEPIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQP  314 (412)
Q Consensus       236 sdeel~~~~l~~L~~~~g~~-~~~~~~~~~~~~~W~~dp~~~G~ys~~~pg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  314 (412)
                      +++++++.++++|+++||.. ..++.|..+.+++|.+|||++|+|+++.|++                            
T Consensus       498 sdeeii~~vl~~L~~ifgp~~~~vp~Pi~~v~t~W~~DP~s~GsYS~~~~g~----------------------------  549 (738)
T PLN02529        498 DPSTLLHRVLSVLRGIYNPKGINVPDPIQTICTRWGSDPLSYGSYSHVRVQS----------------------------  549 (738)
T ss_pred             CHHHHHHHHHHHHHHHhCccccccCCceEEEEccCCcCCCCCCCcccCCCCC----------------------------
Confidence            99999999999999999731 2356889999999999999999999986553                            


Q ss_pred             CCccCCCCccCcchHHhccccccCCCCceEEEecccccCcCcccchhhhhccHHHHHHHHHHHHh
Q psy10795        315 TSLRNGSDRLNTSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVYLRR  379 (412)
Q Consensus       315 ~g~~~~~~~~~~~~~~l~~p~~~~~~~~~l~fAGe~t~~~~~g~~eGA~~SG~raA~~i~~~l~~  379 (412)
                      .+         ..+..|++|+.     +|||||||||+..|+||||||++||+|||++|++.++.
T Consensus       550 ~~---------~d~~~La~pv~-----grL~FAGEaTs~~~pgtVeGAi~SG~RAA~eIl~~l~~  600 (738)
T PLN02529        550 SG---------SDYDILAESVS-----GRLFFAGEATTRQYPATMHGAFLSGLREASRILHVARS  600 (738)
T ss_pred             ch---------hHHHHHhCCCC-----CCEEEEEHHHhCCCCeEeHHHHHHHHHHHHHHHHHHhh
Confidence            11         23567888874     39999999999999999999999999999999998865

>PLN02268 probable polyamine oxidase

Probab=100.00  E-value=7.8e-36  Score=303.15  Aligned_cols=224  Identities=31%  Similarity=0.428  Sum_probs=187.8

Q ss_pred             CcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChhhhhcCcccccCCCcHHHHHHHhcCCCcceeEEEEEcCC
Q psy10795         90 NKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNAIEGLNFGTVDKIFIRFPA  169 (412)
Q Consensus        90 ~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~~L~~~~i~f~P~Lp~~k~~ai~~l~~g~~~KV~l~f~~  169 (412)
                      .+|++|++|++|.+ .+++|.|++.+|+++.||+||+|+|+++|++..|.|.|+||+.++++|++++|+++.||++.|++
T Consensus       211 ~~i~~~~~V~~i~~-~~~~v~v~~~~g~~~~ad~VIva~P~~~l~~~~i~f~p~lp~~~~~ai~~~~~g~~~Kv~l~f~~  289 (435)
T PLN02268        211 LDIRLNHRVTKIVR-RYNGVKVTVEDGTTFVADAAIIAVPLGVLKANIIKFEPELPEWKEEAISDLGVGIENKIALHFDS  289 (435)
T ss_pred             CceeCCCeeEEEEE-cCCcEEEEECCCcEEEcCEEEEecCHHHHhcCcceecCCCCHHHHHHHHhCCccceeEEEEEeCC
Confidence            36999999999999 88899999999988999999999999999876678999999999999999999999999999999


Q ss_pred             CccCCCCCceeEeecCCCccccccccccCCCCCccccccceeecCCCCcEEEEEecccchHHHhcCCHHHHHHHHHHHHH
Q psy10795        170 KWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWIAGPTARYMETLPMAVLQADIMRLFR  249 (412)
Q Consensus       170 ~fW~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~w~~~~~~~~~~~~~~~vL~~~~~g~~a~~~~~lsdeel~~~~l~~L~  249 (412)
                      +||++. ..++.+. +...           ...|..   +..+ ..+..+|++|++|+.+..+..++++++++.++++|+
T Consensus       290 ~fw~~~-~~~g~~~-~~~~-----------~~~~~~---~~~~-~~g~~~l~~~~~g~~a~~~~~~~~~e~~~~v~~~L~  352 (435)
T PLN02268        290 VFWPNV-EFLGVVA-PTSY-----------GCSYFL---NLHK-ATGHPVLVYMPAGRLARDIEKLSDEAAANFAMSQLK  352 (435)
T ss_pred             CCCCCC-ceeeccC-CCCC-----------CceEEE---eccc-CCCCCEEEEEeccHHHHHHHhCCHHHHHHHHHHHHH
Confidence            999753 2333331 1100           112222   1112 234468889999999999999999999999999999


Q ss_pred             HHhCCCCCCCCCcEEEeecCCCCCCCccccCCCCCccccccccCcccccCCCCCCCCCccccccCCCccCCCCccCcchH
Q psy10795        250 HFLGGAYIIPEPIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLNTSAA  329 (412)
Q Consensus       250 ~~~g~~~~~~~~~~~~~~~W~~dp~~~G~ys~~~pg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~~~  329 (412)
                      ++||.   .+.|..+.+++|.+|||++|+|+++.||+.                                     ...++
T Consensus       353 ~~~~~---~~~p~~~~~~~W~~dp~~~G~~~~~~~g~~-------------------------------------~~~~~  392 (435)
T PLN02268        353 KMLPD---ATEPVQYLVSRWGSDPNSLGCYSYDLVGKP-------------------------------------HDLYE  392 (435)
T ss_pred             HHcCC---CCCccEEEecccCCCCCCCccCCCCCCCCC-------------------------------------HHHHH
Confidence            99984   457899999999999999999999977641                                     13467


Q ss_pred             HhccccccCCCCceEEEecccccCcCcccchhhhhccHHHHHHHHHHH
Q psy10795        330 DLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVYL  377 (412)
Q Consensus       330 ~l~~p~~~~~~~~~l~fAGe~t~~~~~g~~eGA~~SG~raA~~i~~~l  377 (412)
                      .|++|++      |||||||+|+..++||||||++||+|||++|++.|
T Consensus       393 ~l~~p~~------~l~FAGe~ts~~~~g~~eGA~~sG~raA~~v~~~l  434 (435)
T PLN02268        393 RLRAPVD------NLFFAGEATSSDFPGSVHGAYSTGVMAAEECRMRL  434 (435)
T ss_pred             HHhCCCC------CeEEeeccCCCcccccHHHHHHHHHHHHHHHHHhh
Confidence            8999986      89999999999999999999999999999999764

>COG1231 Monoamine oxidase [Amino acid transport and metabolism]

Probab=100.00  E-value=1.1e-33  Score=275.54  Aligned_cols=236  Identities=26%  Similarity=0.411  Sum_probs=189.5

Q ss_pred             eeeecCCcCCCCCCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChhhhhcCcccccCCCcHHHHHHHhcCC
Q psy10795         77 TLLVSGQTPVDLSNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNAIEGLN  156 (412)
Q Consensus        77 vl~~~~~~~~~~~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~~L~~~~i~f~P~Lp~~k~~ai~~l~  156 (412)
                      +|-.+++.-|  +..|.++.+|.+|.+ ++++|+|++.+..++.+|+||||+|+.+|.+  |.|.|++|+..+++++.+.
T Consensus       210 ~la~Afa~ql--~~~I~~~~~V~rI~q-~~~gV~Vt~~~~~~~~ad~~i~tiPl~~l~q--I~f~P~l~~~~~~a~~~~~  284 (450)
T COG1231         210 QLAEAFAKQL--GTRILLNEPVRRIDQ-DGDGVTVTADDVGQYVADYVLVTIPLAILGQ--IDFAPLLPAEYKQAAKGVP  284 (450)
T ss_pred             HHHHHHHHHh--hceEEecCceeeEEE-cCCeEEEEeCCcceEEecEEEEecCHHHHhh--cccCCCCCHHHHHHhcCcC
Confidence            3444445544  788999999999999 9999999999956999999999999999999  8999999999999999999


Q ss_pred             CcceeEEEEEcCCCccCCCC--CceeEeecCCCccccccccccCCCCCccccccceeecCCCCcEEEE-EecccchHHHh
Q psy10795        157 FGTVDKIFIRFPAKWWKDGC--QGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLG-WIAGPTARYME  233 (412)
Q Consensus       157 ~g~~~KV~l~f~~~fW~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~w~~~~~~~~~~~~~~~vL~~-~~~g~~a~~~~  233 (412)
                      |++++|+.+.|++|||++..  .|..+  +|..+.          ..+|.+     ....+++++|.+ |+.|+.|..+.
T Consensus       285 y~~~~K~~v~f~rpFWee~~~l~G~~~--tD~~~~----------~i~~~s-----~~~~~G~gVl~g~~~~g~~A~~~~  347 (450)
T COG1231         285 YGSATKIGVAFSRPFWEEAGILGGESL--TDLGLG----------FISYPS-----APFADGPGVLLGSYAFGDDALVID  347 (450)
T ss_pred             cchheeeeeecCchhhhhcccCCceEe--ecCCcc----------eEecCc-----cccCCCceEEEeeeeccccceeEe
Confidence            99999999999999999753  33322  333210          111211     111245677776 77799999999


Q ss_pred             cCCHHHHHHHHHHHHHHHhCCCCCCCCCcEE-EeecCCCCCCCccccCCCCCccccccccCcccccCCCCCCCCCccccc
Q psy10795        234 TLPMAVLQADIMRLFRHFLGGAYIIPEPIRI-VRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSY  312 (412)
Q Consensus       234 ~lsdeel~~~~l~~L~~~~g~~~~~~~~~~~-~~~~W~~dp~~~G~ys~~~pg~~~~~~~~~~~~~~~~~~~~p~~~~~~  312 (412)
                      .++++++++.++..+.++||.  +...+.+. ...+|++|||+.|+|.++.|||.                         
T Consensus       348 ~~~~~~r~~~vl~~l~~~~g~--~a~~~f~~~~~~~W~~dpwt~G~~aa~~~g~~-------------------------  400 (450)
T COG1231         348 ALPEAERRQKVLARLAKLFGD--EAADPFDYGASVDWSKDPWTLGGTAAYPPGQR-------------------------  400 (450)
T ss_pred             cCCHHHHHHHHHHhHhhhCCh--hhccccccceeeecccCCcCCccccccCCccc-------------------------
Confidence            999999999999999999995  33455554 89999999999998888877762                         


Q ss_pred             cCCCccCCCCccCcchHHhccccccCCCCceEEEecccccCcCcccchhhhhccHHHHHHHHHHHHh
Q psy10795        313 QPTSLRNGSDRLNTSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVYLRR  379 (412)
Q Consensus       313 ~~~g~~~~~~~~~~~~~~l~~p~~~~~~~~~l~fAGe~t~~~~~g~~eGA~~SG~raA~~i~~~l~~  379 (412)
                                  .++.+.+..|.+      ||||||++++..+.||||||++||.+||.+|+..+..
T Consensus       401 ------------~~~~~~l~~p~g------RIh~AgtEhas~~~Gw~eGAi~Sg~~AA~ei~~~l~s  449 (450)
T COG1231         401 ------------TKLYPTLPAPHG------RIHFAGTEHASEFGGWLEGAIRSGQRAAAEIHALLSS  449 (450)
T ss_pred             ------------ccccccccCCCC------ceEEeeecccccccchhHHHHHHHHHHHHHHHHhhcC
Confidence                        134567778875      9999995555558899999999999999999988753

>KOG0029|consensus

Probab=100.00  E-value=2.1e-32  Score=278.35  Aligned_cols=237  Identities=32%  Similarity=0.500  Sum_probs=195.4

Q ss_pred             cCCcCCCCCCcEEcCCeEEEEEecCCCc-EEEEeCCCcEEEeCEEEEeCChhhhhcCcccccCCCcHHHHHHHhcCCCcc
Q psy10795         81 SGQTPVDLSNKILYKKEVNKIDWEYQNG-AAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNAIEGLNFGT  159 (412)
Q Consensus        81 ~~~~~~~~~~~I~ln~~V~~I~~~~~~~-V~V~~~~G~~~~ad~VIvTvP~~~L~~~~i~f~P~Lp~~k~~ai~~l~~g~  159 (412)
                      +++.++    +|+|+++|..|.+ .+++ +.+++.+++.+.+|+||+|+|+++|+...|.|.|+||..|.++|+++++|.
T Consensus       224 ~la~~l----~I~~~~~v~~i~~-~~~~~~~~~~~~~~~~~~d~vvvt~pl~vLk~~~i~F~P~Lp~~k~~aI~~lg~g~  298 (501)
T KOG0029|consen  224 SLAEGL----DIHLNKRVRKIKY-GDDGAVKVTVETGDGYEADAVVVTVPLGVLKSGLIEFSPPLPRWKQEAIDRLGFGL  298 (501)
T ss_pred             hcCCCc----ceeeceeeEEEEE-ecCCceEEEEECCCeeEeeEEEEEccHHHhccCceeeCCCCcHHHHHHHHhcCCCc
Confidence            344554    6999999999999 5544 556666666699999999999999999989999999999999999999999


Q ss_pred             eeEEEEEcCCCccCCCCCceeEeecCCCccccccccccCCCCCccccccceeecCCCCcEEEEEecccchHHHhcCCHHH
Q psy10795        160 VDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWIAGPTARYMETLPMAV  239 (412)
Q Consensus       160 ~~KV~l~f~~~fW~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~w~~~~~~~~~~~~~~~vL~~~~~g~~a~~~~~lsdee  239 (412)
                      +.||+|.|++.||+.+...|+.+ +.+.            ...+...++++.+.... .+|+.++.|..++.+..+++++
T Consensus       299 ~~Kv~l~F~~~fW~~~~d~fg~~-~~~~------------~~~~~~~f~~~~~~~~~-~~l~~~~~~~~a~~~~~~~~~~  364 (501)
T KOG0029|consen  299 VNKVILEFPRVFWDQDIDFFGIV-PETS------------VLRGLFTFYDCKPVAGH-PVLMSVVVGEAAERVETLSDSE  364 (501)
T ss_pred             eeEEEEEeccccCCCCcCeEEEc-cccc------------cccchhhhhhcCccCCC-CeEEEEehhhhhHHHhcCCHHH
Confidence            99999999999998665566554 2221            11121112333333333 4889999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCcEEEeecCCCCCCCccccCCCCCccccccccCcccccCCCCCCCCCccccccCCCccC
Q psy10795        240 LQADIMRLFRHFLGGAYIIPEPIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRN  319 (412)
Q Consensus       240 l~~~~l~~L~~~~g~~~~~~~~~~~~~~~W~~dp~~~G~ys~~~pg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~  319 (412)
                      +++.++..|+++|+. .+++.|.+..+++|..|+++.|+|++..++-                            .+   
T Consensus       365 ~~~~~~~~l~k~f~~-~~~~~p~~~~vt~w~~d~~~~gsys~~~~~~----------------------------~~---  412 (501)
T KOG0029|consen  365 IVKKAMKLLRKVFGS-EEVPDPLDALVTRWGTDPLSGGSYSYVAVGS----------------------------DG---  412 (501)
T ss_pred             HHHHHHHHHHHHhcc-CcCCCccceeeeeecccccCCccccccCCCC----------------------------Ch---
Confidence            999999999999993 4688999999999999999999999995431                            11   


Q ss_pred             CCCccCcchHHhccccccCCCCceEEEecccccCcCcccchhhhhccHHHHHHHHHHHHh
Q psy10795        320 GSDRLNTSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVYLRR  379 (412)
Q Consensus       320 ~~~~~~~~~~~l~~p~~~~~~~~~l~fAGe~t~~~~~g~~eGA~~SG~raA~~i~~~l~~  379 (412)
                            ..++.+++|+.+     +||||||+|+..++||||||+.||.|||..|+..+..
T Consensus       413 ------~~y~~l~~pi~~-----~~ffage~t~~~~~~tm~GA~~sG~~~a~~i~~~~~~  461 (501)
T KOG0029|consen  413 ------DDYDRLAEPIKN-----RVFFAGEATSRKYPGTMHGAYLSGLRAASDILDSLIE  461 (501)
T ss_pred             ------hHHHHHhccccC-----cEEecchhhcccCCCchHHHHHhhHHHHHHHHHHHHh
Confidence                  347889999974     7999999999999999999999999999999999885

>PF01593 Amino_oxidase: Flavin containing amine oxidoreductase This is a subset of the Pfam family; InterPro: IPR002937 This entry consists of various amine oxidases, including maize polyamine oxidase (PAO) [], L-amino acid oxidases (LAO) and various flavin containing monoamine oxidases (MAO)

Probab=99.96  E-value=2.6e-29  Score=252.21  Aligned_cols=226  Identities=30%  Similarity=0.471  Sum_probs=183.8

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChhhhhcCcccccCCCcHHHHHHHhcCCCcceeEEEEEcC
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNAIEGLNFGTVDKIFIRFP  168 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~~L~~~~i~f~P~Lp~~k~~ai~~l~~g~~~KV~l~f~  168 (412)
                      +.+|++|++|++|+. ++++|.|++.+|++++||+||+|+|++.+.+  |.|.|++|..+.+++++++|.+..||+|.|+
T Consensus       223 g~~i~l~~~V~~I~~-~~~~v~v~~~~g~~~~ad~VI~a~p~~~l~~--i~~~p~l~~~~~~a~~~~~~~~~~~v~l~~~  299 (450)
T PF01593_consen  223 GGEIRLNTPVTRIER-EDGGVTVTTEDGETIEADAVISAVPPSVLKN--ILLLPPLPEDKRRAIENLPYSSVSKVFLGFD  299 (450)
T ss_dssp             GGGEESSEEEEEEEE-ESSEEEEEETTSSEEEESEEEE-S-HHHHHT--SEEESTSHHHHHHHHHTEEEEEEEEEEEEES
T ss_pred             CceeecCCcceeccc-cccccccccccceEEecceeeecCchhhhhh--hhhcccccccccccccccccCcceeEEEeee
Confidence            568999999999999 8899999999999999999999999999998  7899999999999999999999999999999


Q ss_pred             CCccCCCCCceeEeecCCCccccccccccCCCCCccccccceeecC--CCCcEEEEEecccchHHHhcCCHHHHHHHHHH
Q psy10795        169 AKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDA--EDPLTLLGWIAGPTARYMETLPMAVLQADIMR  246 (412)
Q Consensus       169 ~~fW~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~w~~~~~~~~~~~--~~~~vL~~~~~g~~a~~~~~lsdeel~~~~l~  246 (412)
                      ++||+.+...+++++++..              .+...+.+....+  .+..+++.|+.++.+..+..++++++++.+++
T Consensus       300 ~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~  365 (450)
T PF01593_consen  300 RPFWPPDIDFFGILYSDGF--------------SPIGYVSDPSKFPGRPGGGVLTSYVGGPDAPEWDDLSDEEILERVLD  365 (450)
T ss_dssp             SGGGGSTTTESEEEEESST--------------SSEEEEEEECCTTSCTTSEEEEEEEEHHHHHHHTTSCHHHHHHHHHH
T ss_pred             cccccccccccceecccCc--------------cccccccccccCcccccCCcceeeeeccccchhcccchhhhHHHHHH
Confidence            9999985334445544331              0111111111111  23468889999888889999999999999999


Q ss_pred             HHHHHhCCCCCCCCCcEEEeecCCCCCCCccccCCCCCccccccccCcccccCCCCCCCCCccccccCCCccCCCCccCc
Q psy10795        247 LFRHFLGGAYIIPEPIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLNT  326 (412)
Q Consensus       247 ~L~~~~g~~~~~~~~~~~~~~~W~~dp~~~G~ys~~~pg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~  326 (412)
                      +|+++++. ...++|..+.+++|.++++.+|+|++..+++.                                     ..
T Consensus       366 ~L~~~~~~-~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~-------------------------------------~~  407 (450)
T PF01593_consen  366 DLRKILPG-ASIPDPIDITVTRWSRDPYPRGSYSYFPPGQS-------------------------------------SQ  407 (450)
T ss_dssp             HHHHHHTT-GGGGEESEEEEEECTTSTTTSSSCECHCTTHH-------------------------------------HH
T ss_pred             Hhhhcccc-cccccccccccccccccccccccccccccccc-------------------------------------cc
Confidence            99999994 23567889999999999999999998855431                                     13


Q ss_pred             chHHhccccccCCCCceEEEecccccCcCcccchhhhhccHHHHHHHH
Q psy10795        327 SAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAI  374 (412)
Q Consensus       327 ~~~~l~~p~~~~~~~~~l~fAGe~t~~~~~g~~eGA~~SG~raA~~i~  374 (412)
                      .++.+..|+.     ++|||||||++..+.|+|+||+.||++||++||
T Consensus       408 ~~~~~~~~~~-----~~l~~aG~~~~~~~~~~~~gA~~sG~~aA~~il  450 (450)
T PF01593_consen  408 FRPALRTPID-----PGLYFAGDWTSPGYPGGIEGAILSGRRAAEEIL  450 (450)
T ss_dssp             HHHHHHSCBT-----TTEEE-SGGGSSSSTTSHHHHHHHHHHHHHHHH
T ss_pred             ccccccCCcc-----eEEEEeecccCCCCCCcHHHHHHHHHHHHHHhC
Confidence            5678889984     389999999999888999999999999999996

The aligned region includes the flavin binding site of these enzymes. In vertebrates MAO plays an important role in regulating the intracellular levels of amines via their oxidation; these include various neurotransmitters, neurotoxins and trace amines []. In lower eukaryotes such as aspergillus and in bacteria the main role of amine oxidases is to provide a source of ammonium []. PAOs in plants, bacteria and protozoa oxidise spermidine and spermine to an aminobutyral, diaminopropane and hydrogen peroxide and are involved in the catabolism of polyamines []. Other members of this family include tryptophan 2-monooxygenase, putrescine oxidase, corticosteroid binding proteins and antibacterial glycoproteins.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2Z3Y_A 2UXN_A 2Y48_A 2HKO_A 2XAF_A 2X0L_A 2XAJ_A 2UXX_A 2V1D_A 2Z5U_A ....

>TIGR03467 HpnE squalene-associated FAD-dependent desaturase

Probab=99.87  E-value=3.3e-21  Score=194.26  Aligned_cols=208  Identities=18%  Similarity=0.210  Sum_probs=147.0

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEe-CCCcEEEeCEEEEeCChhhhhcCcccccCCCcHHHHHHHhcCCCcceeEEEEEc
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSC-SDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNAIEGLNFGTVDKIFIRF  167 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~-~~G~~~~ad~VIvTvP~~~L~~~~i~f~P~Lp~~k~~ai~~l~~g~~~KV~l~f  167 (412)
                      +.+|++|++|++|.. ++++|++.. .+|+++.||+||+|+|+.++.+.    .|.  +.+.++++++.|+++.||+|.|
T Consensus       211 g~~i~~~~~V~~i~~-~~~~~~~~~~~~g~~~~~d~vi~a~p~~~~~~l----l~~--~~~~~~l~~~~~~~~~~v~l~~  283 (419)
T TIGR03467       211 GGEVRLGTRVRSIEA-NAGGIRALVLSGGETLPADAVVLAVPPRHAASL----LPG--EDLGALLTALGYSPITTVHLRL  283 (419)
T ss_pred             CCEEEcCCeeeEEEE-cCCcceEEEecCCccccCCEEEEcCCHHHHHHh----CCC--chHHHHHhhcCCcceEEEEEEe
Confidence            678999999999999 777776544 46778999999999999999982    232  2466789999999999999999


Q ss_pred             CCCccCCCCCceeEeecCCCccccccccccCCCCCccccccceeecCCCCcEEEEEecccchHHHhcCCHHHHHHHHHHH
Q psy10795        168 PAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWIAGPTARYMETLPMAVLQADIMRL  247 (412)
Q Consensus       168 ~~~fW~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~w~~~~~~~~~~~~~~~vL~~~~~g~~a~~~~~lsdeel~~~~l~~  247 (412)
                      ++++|... +.++++  ..             ...|...   ....++.+.++..++.+  +..+..++++++++.++++
T Consensus       284 ~~~~~~~~-~~~~~~--~~-------------~~~~~~~---~~~~~~~~~~~~~~~~~--~~~~~~~~~e~~~~~~l~~  342 (419)
T TIGR03467       284 DRAVRLPA-PMVGLV--GG-------------LAQWLFD---RGQLAGEPGYLAVVISA--ARDLVDLPREELADRIVAE  342 (419)
T ss_pred             CCCcCCCC-Ceeeec--CC-------------ceeEEEE---CCcCCCCCCEEEEEEec--chhhccCCHHHHHHHHHHH
Confidence            99998542 233222  11             1223321   11112233456666554  5667889999999999999


Q ss_pred             HHHHhCCCCCCCCCcEEEeecCCCCCCCccccCCCCCccccccccCcccccCCCCCCCCCccccccCCCccCCCCccCcc
Q psy10795        248 FRHFLGGAYIIPEPIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLNTS  327 (412)
Q Consensus       248 L~~~~g~~~~~~~~~~~~~~~W~~dp~~~G~ys~~~pg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~  327 (412)
                      |+++||.. ....+....+.+|..     +.|++. ||..                                      ..
T Consensus       343 l~~~~~~~-~~~~~~~~~~~~~~~-----~~~~~~-~g~~--------------------------------------~~  377 (419)
T TIGR03467       343 LRRAFPRV-AGAKPLWARVIKEKR-----ATFAAT-PGLN--------------------------------------RL  377 (419)
T ss_pred             HHHhcCcc-ccCCccceEEEEccC-----CccccC-Cccc--------------------------------------cc
Confidence            99999852 123455566677764     333332 2210                                      11


Q ss_pred             hHHhccccccCCCCceEEEecccccCcCcccchhhhhccHHHHHHHHH
Q psy10795        328 AADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIV  375 (412)
Q Consensus       328 ~~~l~~p~~~~~~~~~l~fAGe~t~~~~~g~~eGA~~SG~raA~~i~~  375 (412)
                      .+.+..|.+      +||||||+|+..++++||||++||.+||++|++
T Consensus       378 ~~~~~~~~~------~l~~aGd~~~~~~~~~~egA~~SG~~aA~~i~~  419 (419)
T TIGR03467       378 RPGARTPWP------NLFLAGDWTATGWPATMEGAVRSGYQAAEAVLK  419 (419)
T ss_pred             CCCCCCCcC------CEEEecccccCCCcchHHHHHHHHHHHHHHHhC
Confidence            233456664      899999999998889999999999999999863

The sequences in this family are members of the pfam01593 superfamily of flavin-containing amine oxidases which include the phytoene desaturases. These sequences also include a FAD-dependent oxidoreductase domain, pfam01266. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of squalene, the condensation product of the polyisoprenoid farnesyl pyrophosphate. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnE was assigned. This gene is also found in contexts where the downstream conversion of squalene to hopenes is not evidence. The precise nature of the reaction catalyzed by this enzyme is unknown at this time.

>TIGR00562 proto_IX_ox protoporphyrinogen oxidase

Probab=99.87  E-value=4.5e-21  Score=196.33  Aligned_cols=224  Identities=14%  Similarity=0.262  Sum_probs=164.5

Q ss_pred             CcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChhhhhcCcccccCCCcHHHHHHHhcCCCcceeEEEEEcCC
Q psy10795         90 NKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNAIEGLNFGTVDKIFIRFPA  169 (412)
Q Consensus        90 ~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~~L~~~~i~f~P~Lp~~k~~ai~~l~~g~~~KV~l~f~~  169 (412)
                      ++|++|++|++|.+ .+++|+|++.+|+++.||+||+|+|++++..    +.|++|+.+.++++++.|+++.+|.+.|++
T Consensus       238 ~~i~~~~~V~~I~~-~~~~~~v~~~~g~~~~ad~VI~t~P~~~~~~----ll~~~~~~~~~~l~~l~~~~~~~v~l~~~~  312 (462)
T TIGR00562       238 TKVYKGTKVTKLSH-RGSNYTLELDNGVTVETDSVVVTAPHKAAAG----LLSELSNSASSHLDKIHSPPVANVNLGFPE  312 (462)
T ss_pred             CeEEcCCeEEEEEe-cCCcEEEEECCCcEEEcCEEEECCCHHHHHH----HhcccCHHHHHHHhcCCCCceEEEEEEEch
Confidence            57999999999999 8888999998888899999999999999987    347788889999999999999999999999


Q ss_pred             CccCCCCCceeEeecCCCccccccccccCCCCCccccccceeecCCCCcEEEEEecccchHHHhcCCHHHHHHHHHHHHH
Q psy10795        170 KWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWIAGPTARYMETLPMAVLQADIMRLFR  249 (412)
Q Consensus       170 ~fW~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~w~~~~~~~~~~~~~~~vL~~~~~g~~a~~~~~lsdeel~~~~l~~L~  249 (412)
                      ++|.....+++++.++.+...+.       ...|.+..+.... +.+..+|++|++|..+..+.+++++++++.++++|+
T Consensus       313 ~~~~~~~~~~g~l~~~~~~~~~~-------~~i~~s~~~p~~~-p~g~~~l~~~~~g~~~~~~~~~~~ee~~~~v~~~L~  384 (462)
T TIGR00562       313 GSVDGELEGFGFLISRSSKFAIL-------GCIFTSKLFPNRA-PPGKTLLTAYIGGATDESIVDLSENEIINIVLRDLK  384 (462)
T ss_pred             HHcCCCCCceEEEccCCCCCceE-------EEEEEccccCCcC-CCCcEEEEEEeCCCCCccccCCCHHHHHHHHHHHHH
Confidence            99976556676664433211011       1122222222111 233457889998888888889999999999999999


Q ss_pred             HHhCCCCCCCCCcEEEeecCCCCCCCccccCCCCCccccccccCcccccCCCCCCCCCccccccCCCccCCCCccCcchH
Q psy10795        250 HFLGGAYIIPEPIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLNTSAA  329 (412)
Q Consensus       250 ~~~g~~~~~~~~~~~~~~~W~~dp~~~G~ys~~~pg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~~~  329 (412)
                      ++++.  . ..|....+++|..      +|..+.+|..                                  +.+....+
T Consensus       385 ~~~gi--~-~~p~~~~v~rw~~------a~P~~~~g~~----------------------------------~~~~~i~~  421 (462)
T TIGR00562       385 KVLNI--N-NEPEMLCVTRWHR------AIPQYHVGHD----------------------------------QRLKEARE  421 (462)
T ss_pred             HHhCC--C-CCCcEEEEeEccc------cCCCCCCChH----------------------------------HHHHHHHH
Confidence            99984  2 2488889999983      3443322210                                  01111111


Q ss_pred             HhccccccCCCCceEEEecccccCcCcccchhhhhccHHHHHHHHHHHH
Q psy10795        330 DLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVYLR  378 (412)
Q Consensus       330 ~l~~p~~~~~~~~~l~fAGe~t~~~~~g~~eGA~~SG~raA~~i~~~l~  378 (412)
                      .+..+.      ++|++||+++..   ..|++|+.||.++|++|++.+.
T Consensus       422 ~l~~~~------~~l~l~G~~~~g---~~i~~~i~sg~~~a~~~~~~~~  461 (462)
T TIGR00562       422 LLESAY------PGVFLTGNSFEG---VGIPDCIDQGKAAASDVLTFLF  461 (462)
T ss_pred             HHHhhC------CCEEEeccccCC---CcHHHHHHHHHHHHHHHHHhhc
Confidence            222332      489999999875   4699999999999999988763

This protein is a flavoprotein and has a beta-alpha-beta dinucleotide binding motif near the amino end.

>TIGR02731 phytoene_desat phytoene desaturase

Probab=99.86  E-value=6.7e-21  Score=194.65  Aligned_cols=219  Identities=15%  Similarity=0.164  Sum_probs=150.4

Q ss_pred             CCcEEcCCeEEEEEecCCCcE-EEEeCCCc-----EEEeCEEEEeCChhhhhcCcccccCCCc-HHHHHHHhcCCCccee
Q psy10795         89 SNKILYKKEVNKIDWEYQNGA-AVSCSDGS-----VYTAYKIIITVPLGVLKSKLITFVPSLP-AQKLNAIEGLNFGTVD  161 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V-~V~~~~G~-----~~~ad~VIvTvP~~~L~~~~i~f~P~Lp-~~k~~ai~~l~~g~~~  161 (412)
                      +++|++|++|++|...+++.| .|++.+|+     ++.||+||+|+|++.+.+.   +.+.++ ....+.++++.++++.
T Consensus       227 g~~i~l~~~V~~I~~~~~~~v~~v~~~~~~~~~~~~~~a~~VI~a~p~~~~~~l---L~~~~~~~~~~~~~~~~~~~~~~  303 (453)
T TIGR02731       227 GGEVRLNSRLKEIVLNEDGSVKHFVLADGEGQRRFEVTADAYVSAMPVDIFKLL---LPQPWKQMPFFQKLNGLEGVPVI  303 (453)
T ss_pred             CCEEeCCCeeEEEEECCCCCEEEEEEecCCCCceeEEECCEEEEcCCHHHHHhh---CchhhhcCHHHHHhhcCCCCcEE
Confidence            678999999999986233334 46665554     7899999999999998872   222222 2345667778899999


Q ss_pred             EEEEEcCCCccCCCCCceeEeecCCCccccccccccCCCCCccccccceeecCCCCcEEEEEecccchHHHhcCCHHHHH
Q psy10795        162 KIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWIAGPTARYMETLPMAVLQ  241 (412)
Q Consensus       162 KV~l~f~~~fW~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~w~~~~~~~~~~~~~~~vL~~~~~g~~a~~~~~lsdeel~  241 (412)
                      ||.+.|++++|...  ++.+  +..+..   +     ....|....+++.. + +. .++++..+. +..+..++++|++
T Consensus       304 ~v~l~~~~~~~~~~--~~~~--~~~~~~---~-----~~~~~s~~~~~~~~-~-~~-~l~~~~~~~-~~~~~~~~~ee~~  367 (453)
T TIGR02731       304 NVHIWFDRKLTTVD--HLLF--SRSPLL---S-----VYADMSETCKEYAD-P-DK-SMLELVFAP-AADWIGRSDEEII  367 (453)
T ss_pred             EEEEEEccccCCCC--ceee--eCCCcc---e-----eecchhhhChhhcC-C-CC-eEEEEEecC-hhhhhcCCHHHHH
Confidence            99999999987542  3322  222110   0     01122222222222 2 23 444444443 4567889999999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCcEEEeecCCCCCCCccccCCCCCccccccccCcccccCCCCCCCCCccccccCCCccCCC
Q psy10795        242 ADIMRLFRHFLGGAYIIPEPIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGS  321 (412)
Q Consensus       242 ~~~l~~L~~~~g~~~~~~~~~~~~~~~W~~dp~~~G~ys~~~pg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~  321 (412)
                      +.++++|+++||.......+.++..++|.++||+.  |. ..||+.                                  
T Consensus       368 ~~v~~~L~~~~~~~~~~~~~~~~~~~~~~~~p~a~--~~-~~pg~~----------------------------------  410 (453)
T TIGR02731       368 DATMAELAKLFPNHIKADSPAKILKYKVVKTPRSV--YK-TTPGRQ----------------------------------  410 (453)
T ss_pred             HHHHHHHHHhCCcccCCCCCceEEEEEEEECCCce--ec-cCCCCh----------------------------------
Confidence            99999999999841112256778889999999984  42 334321                                  


Q ss_pred             CccCcchHHhccccccCCCCceEEEecccccCcCcccchhhhhccHHHHHHH
Q psy10795        322 DRLNTSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANA  373 (412)
Q Consensus       322 ~~~~~~~~~l~~p~~~~~~~~~l~fAGe~t~~~~~g~~eGA~~SG~raA~~i  373 (412)
                          ...+.+++|++      +|||||++++..|+|+||||++||.+||++|
T Consensus       411 ----~~~~~~~~p~~------~l~~AG~~~a~~~~g~~egAi~SG~~AA~~v  452 (453)
T TIGR02731       411 ----QYRPHQKTPIP------NFFLAGDYTKQKYLASMEGAVLSGKLCAQAI  452 (453)
T ss_pred             ----hhCccccCccC------CEEEeehhccCcccccHHHHHHHHHHHHHHh
Confidence                23456778875      8999999999999999999999999999987

Plants and cyanobacteria (and, supposedly, Chlorobium tepidum) have a conserved pathway from two molecules geranylgeranyl-PP to one of all-trans-lycopene. Members of this family are the enzyme pytoene desaturase (also called phytoene dehydrogenase). This model does not include the region of the chloroplast transit peptide in plants. A closely related family, excluded by this model, is zeta-carotene desaturase, another enzyme in the same pathway.

>PLN02576 protoporphyrinogen oxidase

Probab=99.86  E-value=9e-21  Score=195.91  Aligned_cols=238  Identities=18%  Similarity=0.216  Sum_probs=163.7

Q ss_pred             eeeecCCcCCCCC-CcEEcCCeEEEEEecCCCc-EEEEe--CCCc-EEEeCEEEEeCChhhhhcCcccccCCCcHHHHHH
Q psy10795         77 TLLVSGQTPVDLS-NKILYKKEVNKIDWEYQNG-AAVSC--SDGS-VYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNA  151 (412)
Q Consensus        77 vl~~~~~~~~~~~-~~I~ln~~V~~I~~~~~~~-V~V~~--~~G~-~~~ad~VIvTvP~~~L~~~~i~f~P~Lp~~k~~a  151 (412)
                      .|..+++..+  + ++|++|++|++|++ .+++ |.|++  .+|+ +++||+||+|+|+.++...  .  +++++...++
T Consensus       240 ~L~~~la~~l--~~~~i~l~~~V~~I~~-~~~~~~~v~~~~~~g~~~~~ad~VI~a~P~~~l~~l--l--~~~~~~~~~~  312 (496)
T PLN02576        240 TLPDALAKRL--GKDKVKLNWKVLSLSK-NDDGGYSLTYDTPEGKVNVTAKAVVMTAPLYVVSEM--L--RPKSPAAADA  312 (496)
T ss_pred             HHHHHHHHhh--CcCcEEcCCEEEEEEE-CCCCcEEEEEecCCCceeEEeCEEEECCCHHHHHHH--h--cccCHHHHHH
Confidence            4555666555  4 67999999999999 6665 66654  3553 6999999999999999983  2  3355667889


Q ss_pred             HhcCCCcceeEEEEEcCCCccCC------CCCceeEeecCCCccccccccccCCCCCccccccceeecCCCCcEEEEEec
Q psy10795        152 IEGLNFGTVDKIFIRFPAKWWKD------GCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWIA  225 (412)
Q Consensus       152 i~~l~~g~~~KV~l~f~~~fW~~------~~~~~~~~~~~~~~~~~~g~~~~~~~~~w~~~~~~~~~~~~~~~vL~~~~~  225 (412)
                      ++++.|.++.+|.+.|++++|..      ...+++++++..+.....       ...|.+.+++.. .+++..++++|++
T Consensus       313 l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l-------g~~~~s~~~p~~-~~~~~~~l~~~~~  384 (496)
T PLN02576        313 LPEFYYPPVAAVTTSYPKEAVKRERLIDGPLEGFGQLHPRKQGVKTL-------GTIYSSSLFPDR-APEGRVLLLNYIG  384 (496)
T ss_pred             hccCCCCceEEEEEEEchHHcccccccCCCCCceEEEccCCCCCceE-------EEEeecCcCCCC-CCCCCEEEEEEEC
Confidence            99999999999999999999976      334565543221100000       112222222211 1233456778999


Q ss_pred             ccchHHHhcCCHHHHHHHHHHHHHHHhCCCCCCCCCcEEEeecCCCCCCCccccCCCCCccccccccCcccccCCCCCCC
Q psy10795        226 GPTARYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRA  305 (412)
Q Consensus       226 g~~a~~~~~lsdeel~~~~l~~L~~~~g~~~~~~~~~~~~~~~W~~dp~~~G~ys~~~pg~~~~~~~~~~~~~~~~~~~~  305 (412)
                      +..+..+.+++++++++.++++|++++|. ...+.|....+++|..      ++..+.+|..                  
T Consensus       385 ~~~~~~~~~~s~ee~~~~~~~~L~~~~g~-~~~~~p~~~~~~~w~~------a~P~~~~g~~------------------  439 (496)
T PLN02576        385 GSRNTGIASASEEELVEAVDRDLRKLLLK-PGAPPPKVVGVRVWPK------AIPQYLLGHL------------------  439 (496)
T ss_pred             CCCCcccccCCHHHHHHHHHHHHHHHhCC-CCCCCCcEEEEeEcCc------ccCCCCcCHH------------------
Confidence            88888999999999999999999999984 2234677778899973      2333322210                  


Q ss_pred             CCccccccCCCccCCCCccCcchHHhccccccCCCCceEEEecccccCcCcccchhhhhccHHHHHHHHHHHH
Q psy10795        306 PLCRRSYQPTSLRNGSDRLNTSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVYLR  378 (412)
Q Consensus       306 p~~~~~~~~~g~~~~~~~~~~~~~~l~~p~~~~~~~~~l~fAGe~t~~~~~g~~eGA~~SG~raA~~i~~~l~  378 (412)
                                          ...+.+.+.+.+ ...++|+||||++..   .+|+||++||.++|++|+..+.
T Consensus       440 --------------------~~~~~~~~~l~~-~~~~~l~~aG~~~~g---~~i~~ai~sg~~aA~~i~~~~~  488 (496)
T PLN02576        440 --------------------DVLEAAEKMEKD-LGLPGLFLGGNYRGG---VALGKCVESGYEAADLVISYLE  488 (496)
T ss_pred             --------------------HHHHHHHHHHHh-cCCCCEEEeccccCC---ccHHHHHHHHHHHHHHHHHHHh
Confidence                                112223332221 001489999999986   4799999999999999998765

>PRK12416 protoporphyrinogen oxidase; Provisional

Probab=99.86  E-value=7.9e-21  Score=194.65  Aligned_cols=233  Identities=11%  Similarity=0.138  Sum_probs=162.9

Q ss_pred             eeeecCCcCCCCCCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChhhhhcCcccccCCCcHHHHHHHhcCC
Q psy10795         77 TLLVSGQTPVDLSNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNAIEGLN  156 (412)
Q Consensus        77 vl~~~~~~~~~~~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~~L~~~~i~f~P~Lp~~k~~ai~~l~  156 (412)
                      .|..++++.+. ..+|++|++|++|++ .+++|.|++.+|+++.||+||+|+|+.++.+  +.+.|++++    .++++.
T Consensus       227 ~l~~~l~~~l~-~~~i~~~~~V~~I~~-~~~~~~v~~~~g~~~~ad~VI~a~p~~~~~~--ll~~~~l~~----~~~~~~  298 (463)
T PRK12416        227 TIIDRLEEVLT-ETVVKKGAVTTAVSK-QGDRYEISFANHESIQADYVVLAAPHDIAET--LLQSNELNE----QFHTFK  298 (463)
T ss_pred             HHHHHHHHhcc-cccEEcCCEEEEEEE-cCCEEEEEECCCCEEEeCEEEECCCHHHHHh--hcCCcchhH----HHhcCC
Confidence            45556665552 247999999999999 7888999998888899999999999999988  566666553    567888


Q ss_pred             CcceeEEEEEcCCCccCCCCCceeEeecCCCccccccccccCCCCCccccccceeecCCCCcEEEE-Eec--ccchHHHh
Q psy10795        157 FGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLG-WIA--GPTARYME  233 (412)
Q Consensus       157 ~g~~~KV~l~f~~~fW~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~w~~~~~~~~~~~~~~~vL~~-~~~--g~~a~~~~  233 (412)
                      +.++.+|++.|++++|..+..+++++.++.+...       .+...|.+..+... .++. .+|+. |+.  ++.++.+.
T Consensus       299 ~~~~~~v~l~~~~~~~~~~~~g~G~l~~~~~~~~-------~~~~~~~s~~~~~~-~~~~-~~l~~~~~~~~~~~~~~~~  369 (463)
T PRK12416        299 NSSLISIYLGFDILDEQLPADGTGFIVTENSDLH-------CDACTWTSRKWKHT-SGKQ-KLLVRMFYKSTNPVYETIK  369 (463)
T ss_pred             CCceEEEEEEechhhcCCCCCceEEEeeCCCCCe-------EEEEEeecCCCCCc-CCCC-eEEEEEEeCCCCCCchhhh
Confidence            9999999999998877544456776644332110       01223443333221 1223 34544 554  46778889


Q ss_pred             cCCHHHHHHHHHHHHHHHhCCCCCCCCCcEEEeecCCCCCCCccccCCCCCccccccccCcccccCCCCCCCCCcccccc
Q psy10795        234 TLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQ  313 (412)
Q Consensus       234 ~lsdeel~~~~l~~L~~~~g~~~~~~~~~~~~~~~W~~dp~~~G~ys~~~pg~~~~~~~~~~~~~~~~~~~~p~~~~~~~  313 (412)
                      .++++|+.+.++++|+++||.   ...|....+++|.+      ++..+                               
T Consensus       370 ~~~dee~~~~~~~~L~~~lG~---~~~p~~~~v~~W~~------a~P~y-------------------------------  409 (463)
T PRK12416        370 NYSEEELVRVALYDIEKSLGI---KGEPEVVEVTNWKD------LMPKY-------------------------------  409 (463)
T ss_pred             cCCHHHHHHHHHHHHHHHhCC---CCCceEEEEEEccc------cCCCc-------------------------------
Confidence            999999999999999999995   34788999999984      11111                               


Q ss_pred             CCCccCCCCccCcchHHhccccccCCCCceEEEecccccCcCcccchhhhhccHHHHHHHHHHHH
Q psy10795        314 PTSLRNGSDRLNTSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVYLR  378 (412)
Q Consensus       314 ~~g~~~~~~~~~~~~~~l~~p~~~~~~~~~l~fAGe~t~~~~~g~~eGA~~SG~raA~~i~~~l~  378 (412)
                      .+||   ...+....+.+..+.      ++|||||+++++.   +|+||+.||+++|++|++.++
T Consensus       410 ~~~~---~~~~~~~~~~l~~~~------~~l~~aG~~~~g~---~i~~ai~sg~~aA~~i~~~~~  462 (463)
T PRK12416        410 HLEH---NQAVQSLQEKMMNLY------PNIYLAGASYYGV---GIGACIGNGKNTANEIIATLN  462 (463)
T ss_pred             CcCH---HHHHHHHHHHHHhhC------CCeEEeccccccc---cHHHHHHHHHHHHHHHHHHhh
Confidence            1221   001111122333333      4899999998874   599999999999999998764

>PLN02612 phytoene desaturase

Probab=99.83  E-value=1.1e-19  Score=189.92  Aligned_cols=225  Identities=15%  Similarity=0.147  Sum_probs=146.9

Q ss_pred             CCcEEcCCeEEEEEecCCCc--EEEEeCCCcEEEeCEEEEeCChhhhhcCcccccCCCcHHHHHHHhcCCCcceeEEEEE
Q psy10795         89 SNKILYKKEVNKIDWEYQNG--AAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNAIEGLNFGTVDKIFIR  166 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~--V~V~~~~G~~~~ad~VIvTvP~~~L~~~~i~f~P~Lp~~k~~ai~~l~~g~~~KV~l~  166 (412)
                      |++|++|++|++|.. ++++  +.|++.+|+++.||+||+|+|+.+++.++....  .+....+.++++.+.++.+|+|.
T Consensus       322 G~~I~l~~~V~~I~~-~~~g~v~~v~~~~G~~~~ad~VI~a~p~~~l~~Ll~~~~--~~~~~~~~l~~l~~~~v~~v~l~  398 (567)
T PLN02612        322 GGEVRLNSRIKKIEL-NDDGTVKHFLLTNGSVVEGDVYVSATPVDILKLLLPDQW--KEIPYFKKLDKLVGVPVINVHIW  398 (567)
T ss_pred             CCEEEeCCeeeEEEE-CCCCcEEEEEECCCcEEECCEEEECCCHHHHHHhCcchh--cCcHHHHHHHhcCCCCeEEEEEE
Confidence            789999999999998 5555  347777898999999999999999987321111  11233445667889999999999


Q ss_pred             cCCCccCCCCCceeEeecCCCccccccccccCCCCCccccccceeecCCCCcEEEEEecccchHHHhcCCHHHHHHHHHH
Q psy10795        167 FPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWIAGPTARYMETLPMAVLQADIMR  246 (412)
Q Consensus       167 f~~~fW~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~w~~~~~~~~~~~~~~~vL~~~~~g~~a~~~~~lsdeel~~~~l~  246 (412)
                      |++++|... ...  +....+...+        ...+....+.+.  +++..++.+.+ + .++++..++++++++.+++
T Consensus       399 ~dr~~~~~~-~~~--~~~~~~~~~~--------~~d~S~~~~~~~--~~~~~ll~~~~-~-~a~~~~~~sdeei~e~vl~  463 (567)
T PLN02612        399 FDRKLKNTY-DHL--LFSRSPLLSV--------YADMSTTCKEYY--DPNKSMLELVF-A-PAEEWISRSDEDIIDATMK  463 (567)
T ss_pred             ECcccCCCC-Cce--eecCCCCcee--------ehhhhhcchhhc--CCCCeEEEEEE-E-cChhhhcCCHHHHHHHHHH
Confidence            999998642 222  2122211000        000111111111  22334444433 3 5678889999999999999


Q ss_pred             HHHHHhCCCCCCCC--CcEEEeecCCCCCCCccccCCCCCccccccccCcccccCCCCCCCCCccccccCCCccCCCCcc
Q psy10795        247 LFRHFLGGAYIIPE--PIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRL  324 (412)
Q Consensus       247 ~L~~~~g~~~~~~~--~~~~~~~~W~~dp~~~G~ys~~~pg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~~~~  324 (412)
                      +|+++||.. ..++  ...+....+...|++.  |.+. |+..                                     
T Consensus       464 ~L~~lfp~~-~~~~~~~~~i~~~~~v~~P~a~--~~~~-pg~~-------------------------------------  502 (567)
T PLN02612        464 ELAKLFPDE-ISADQSKAKILKYHVVKTPRSV--YKTV-PNCE-------------------------------------  502 (567)
T ss_pred             HHHHHCCcc-cccccCCceEEEEEEeccCCce--EEeC-CCCc-------------------------------------
Confidence            999999952 1122  1233344445555532  4332 3210                                     


Q ss_pred             CcchHHhccccccCCCCceEEEecccccCcCcccchhhhhccHHHHHHHHHHHHh
Q psy10795        325 NTSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVYLRR  379 (412)
Q Consensus       325 ~~~~~~l~~p~~~~~~~~~l~fAGe~t~~~~~g~~eGA~~SG~raA~~i~~~l~~  379 (412)
                       .+++.++.|+.      +||||||+|+..|+++||||++||++||++|++.+..
T Consensus       503 -~~rp~~~tPi~------~l~lAGd~t~~~~~~smeGAv~SG~~AA~~I~~~~~~  550 (567)
T PLN02612        503 -PCRPLQRSPIE------GFYLAGDYTKQKYLASMEGAVLSGKLCAQSIVQDYEL  550 (567)
T ss_pred             -ccCccccCccC------CEEEeecceeCCchhhHHHHHHHHHHHHHHHHHHhcc
Confidence             12234566774      8999999999999999999999999999999988643

>PRK11883 protoporphyrinogen oxidase; Reviewed

Probab=99.81  E-value=5.4e-19  Score=180.20  Aligned_cols=228  Identities=18%  Similarity=0.208  Sum_probs=152.3

Q ss_pred             eeeecCCcCCCCCC-cEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChhhhhcCcccccCCCcHHHHHHHhcC
Q psy10795         77 TLLVSGQTPVDLSN-KILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNAIEGL  155 (412)
Q Consensus        77 vl~~~~~~~~~~~~-~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~~L~~~~i~f~P~Lp~~k~~ai~~l  155 (412)
                      .+..++...+  +. +|++|++|++|+. .+++|.|++.+|+++.||+||+|+|++++.+.  .+ |   +...++++++
T Consensus       222 ~l~~~l~~~l--~~~~i~~~~~V~~i~~-~~~~~~v~~~~g~~~~~d~vI~a~p~~~~~~l--~~-~---~~~~~~~~~~  292 (451)
T PRK11883        222 SLIEALEEKL--PAGTIHKGTPVTKIDK-SGDGYEIVLSNGGEIEADAVIVAVPHPVLPSL--FV-A---PPAFALFKTI  292 (451)
T ss_pred             HHHHHHHHhC--cCCeEEeCCEEEEEEE-cCCeEEEEECCCCEEEcCEEEECCCHHHHHHh--cc-C---hhHHHHHhCC
Confidence            3444444444  23 7999999999998 77889999999999999999999999999983  22 2   2356788999


Q ss_pred             CCcceeEEEEEcCCCccCCCCCceeEeecCCCccccccccccCCCCCccccccceeecCCCCcEEEEEecccchHHHhcC
Q psy10795        156 NFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWIAGPTARYMETL  235 (412)
Q Consensus       156 ~~g~~~KV~l~f~~~fW~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~w~~~~~~~~~~~~~~~vL~~~~~g~~a~~~~~l  235 (412)
                      .|+++.||++.|+++++.. ..+++++....+...+.       ...|.+..++.. .+.+..++..+.++..+..+..+
T Consensus       293 ~~~~~~~v~l~~~~~~~~~-~~~~~~~~~~~~~~~~~-------~~~~~s~~~~~~-~p~g~~~~~~~~~~~~~~~~~~~  363 (451)
T PRK11883        293 PSTSVATVALAFPESATNL-PDGTGFLVARNSDYTIT-------ACTWTSKKWPHT-TPEGKVLLRLYVGRPGDEAVVDA  363 (451)
T ss_pred             CCCceEEEEEEeccccCCC-CCceEEEecCCCCCcEE-------EEEeEcCcCCCC-CCCCcEEEEEecCCCCCchhccC
Confidence            9999999999999997322 22344432311100000       111222111111 12233344444444444556788


Q ss_pred             CHHHHHHHHHHHHHHHhCCCCCCCCCcEEEeecCCCCCCCccccCCCCCccccccccCcccccCCCCCCCCCccccccCC
Q psy10795        236 PMAVLQADIMRLFRHFLGGAYIIPEPIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPT  315 (412)
Q Consensus       236 sdeel~~~~l~~L~~~~g~~~~~~~~~~~~~~~W~~dp~~~G~ys~~~pg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  315 (412)
                      +++++++.++++|++++|.   ...|....+++|..      +|+.+.||..                            
T Consensus       364 ~~~~~~~~~~~~L~~~~g~---~~~~~~~~~~rw~~------a~p~~~~~~~----------------------------  406 (451)
T PRK11883        364 TDEELVAFVLADLSKVMGI---TGDPEFTIVQRWKE------AMPQYGVGHI----------------------------  406 (451)
T ss_pred             CHHHHHHHHHHHHHHHhCC---CCCceEEEEeecCc------cCCCCCccHH----------------------------
Confidence            9999999999999999984   23677889999984      3555533310                            


Q ss_pred             CccCCCCccCcchHHhccccccCCCCceEEEecccccCcCcccchhhhhccHHHHHHHHH
Q psy10795        316 SLRNGSDRLNTSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIV  375 (412)
Q Consensus       316 g~~~~~~~~~~~~~~l~~p~~~~~~~~~l~fAGe~t~~~~~g~~eGA~~SG~raA~~i~~  375 (412)
                                .....+..++..   .++|||||+++.+   +.|++|++||+++|++|++
T Consensus       407 ----------~~~~~l~~~l~~---~~~l~~aG~~~~g---~~i~~av~sg~~~a~~i~~  450 (451)
T PRK11883        407 ----------ERVAELRAGLPH---YPGLYVAGASFEG---VGLPDCIAQAKRAAARLLA  450 (451)
T ss_pred             ----------HHHHHHHHhhhh---CCCEEEECcccCC---ccHHHHHHHHHHHHHHHHh
Confidence                      112334444421   2389999999864   4699999999999999975

>PRK07233 hypothetical protein; Provisional

Probab=99.74  E-value=9.9e-17  Score=162.56  Aligned_cols=230  Identities=14%  Similarity=0.129  Sum_probs=146.5

Q ss_pred             eeecCCcCCC-CCCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChhhhhcCcccccCCCcHHHHHHHhcCC
Q psy10795         78 LLVSGQTPVD-LSNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNAIEGLN  156 (412)
Q Consensus        78 l~~~~~~~~~-~~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~~L~~~~i~f~P~Lp~~k~~ai~~l~  156 (412)
                      +..++.+.+. .+.+|++|++|++|+. +++++.+.+.+|++++||+||+|+|+..+.+.    .|++++...++++++.
T Consensus       200 l~~~l~~~l~~~g~~v~~~~~V~~i~~-~~~~~~~~~~~~~~~~ad~vI~a~p~~~~~~l----l~~~~~~~~~~~~~~~  274 (434)
T PRK07233        200 LIDALAEAIEARGGEIRLGTPVTSVVI-DGGGVTGVEVDGEEEDFDAVISTAPPPILARL----VPDLPADVLARLRRID  274 (434)
T ss_pred             HHHHHHHHHHhcCceEEeCCCeeEEEE-cCCceEEEEeCCceEECCEEEECCCHHHHHhh----cCCCcHHHHhhhcccC
Confidence            4444444333 3678999999999998 77778766667779999999999999999872    2667777788899999


Q ss_pred             CcceeEEEEEcCCCccCCCCCceeEeecCCCccccccccccCCCCCccccccceeecCCCCcEE--EEEecccchHHHhc
Q psy10795        157 FGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTL--LGWIAGPTARYMET  234 (412)
Q Consensus       157 ~g~~~KV~l~f~~~fW~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~w~~~~~~~~~~~~~~~vL--~~~~~g~~a~~~~~  234 (412)
                      |.+..++++.|+++.++    .+.....+++. .+.+       ..+.+.... ...+++..++  .+|+.+..  .+..
T Consensus       275 ~~~~~~~~l~~~~~~~~----~~~~~~~~~~~-~~~~-------~~~~s~~~~-~~~~~g~~~~~~~~~~~~~~--~~~~  339 (434)
T PRK07233        275 YQGVVCMVLKLRRPLTD----YYWLNINDPGA-PFGG-------VIEHTNLVP-PERYGGEHLVYLPKYLPGDH--PLWQ  339 (434)
T ss_pred             ccceEEEEEEecCCCCC----CceeeecCCCC-Ccce-------EEEecccCC-ccccCCceEEEEeeecCCCC--hhhc
Confidence            99999999999998532    11111111110 0000       001110000 0111222332  34555443  3668


Q ss_pred             CCHHHHHHHHHHHHHHHhCCCCCCCCCcEEEeecCCCCCCCccccCCCCCccccccccCcccccCCCCCCCCCccccccC
Q psy10795        235 LPMAVLQADIMRLFRHFLGGAYIIPEPIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQP  314 (412)
Q Consensus       235 lsdeel~~~~l~~L~~~~g~~~~~~~~~~~~~~~W~~dp~~~G~ys~~~pg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  314 (412)
                      ++++++++.++++|++++|. .....+...   +|.+.+++.+.   +.||..                           
T Consensus       340 ~~~~~~~~~~~~~L~~~~p~-~~~~~~~~~---~~~r~~~a~~~---~~~g~~---------------------------  385 (434)
T PRK07233        340 MSDEELLDRFLSYLRKMFPD-FDRDDVRAV---RISRAPYAQPI---YEPGYL---------------------------  385 (434)
T ss_pred             CCHHHHHHHHHHHHHHhCCC-CChhheeeE---EEEEecccccc---ccCchh---------------------------
Confidence            89999999999999999983 111233444   44444454332   222210                           


Q ss_pred             CCccCCCCccCcchHHhccccccCCCCceEEEecccccCcCcccchhhhhccHHHHHHHHHHHH
Q psy10795        315 TSLRNGSDRLNTSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVYLR  378 (412)
Q Consensus       315 ~g~~~~~~~~~~~~~~l~~p~~~~~~~~~l~fAGe~t~~~~~g~~eGA~~SG~raA~~i~~~l~  378 (412)
                                 ...+.+.+|+.      +|||||+++...+.++|+||++||.+||++|++.++
T Consensus       386 -----------~~~~~~~~~~~------~l~~aG~~~~~~~~~~~~~Ai~sG~~aA~~i~~~~~  432 (434)
T PRK07233        386 -----------DKIPPYDTPIE------GLYLAGMSQIYPEDRSINGSVRAGRRVAREILEDRR  432 (434)
T ss_pred             -----------hcCCCcccCcC------CEEEeCCcccCCccCchhHHHHHHHHHHHHHhhhhc
Confidence                       11233455653      899999955554556899999999999999998875

>COG3380 Predicted NAD/FAD-dependent oxidoreductase [General function prediction only]

Probab=99.74  E-value=4.7e-18  Score=155.11  Aligned_cols=211  Identities=17%  Similarity=0.191  Sum_probs=155.7

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCC-cEEEeCEEEEeCChhhhhcCcccccCCCcHHHHHHHhcCCCcceeEEEEEc
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDG-SVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNAIEGLNFGTVDKIFIRF  167 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G-~~~~ad~VIvTvP~~~L~~~~i~f~P~Lp~~k~~ai~~l~~g~~~KV~l~f  167 (412)
                      ..+|+++++|++|.+ .++.|+|++++| +...+|.||+|+|.+++..++-.-.-.+|...++++..+.|.||+.+.|.|
T Consensus       117 dL~V~~~~rVt~v~~-~~~~W~l~~~~g~~~~~~d~vvla~PAPQ~~~LLt~~~~~~p~~l~~~~a~V~y~Pc~s~~lg~  195 (331)
T COG3380         117 DLTVVLETRVTEVAR-TDNDWTLHTDDGTRHTQFDDVVLAIPAPQTATLLTTDADDLPAALRAALADVVYAPCWSAVLGY  195 (331)
T ss_pred             cchhhhhhhhhhhee-cCCeeEEEecCCCcccccceEEEecCCCcchhhcCcccccchHHHHHhhccceehhHHHHHhcC
Confidence            347999999999999 799999999776 467999999999999998732111236888899999999999999999999


Q ss_pred             CCCccCCCCCceeEeecCCCccccccccccCCCCCccccccceeec---CCCCcEEEEEecccchHHHhcCCHHHHHHHH
Q psy10795        168 PAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMD---AEDPLTLLGWIAGPTARYMETLPMAVLQADI  244 (412)
Q Consensus       168 ~~~fW~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~w~~~~~~~~~~---~~~~~vL~~~~~g~~a~~~~~lsdeel~~~~  244 (412)
                      .++--.. .++ .++  +       |.     +..|..  .+.++.   +.+ .+++...+.++++.+.+.++|+.+..+
T Consensus       196 ~q~l~~P-~~G-~~v--d-------g~-----~laWla--~d~sK~g~~p~~-~~~vvqasp~wSr~h~~~~~e~~i~~l  256 (331)
T COG3380         196 PQPLDRP-WPG-NFV--D-------GH-----PLAWLA--RDASKKGHVPDG-EIWVVQASPDWSREHLDHPAEQVIVAL  256 (331)
T ss_pred             CccCCCC-CCC-ccc--C-------CC-----eeeeee--ccccCCCCCCcC-ceEEEEeCchHHHHhhcCCHHHHHHHH
Confidence            9764111 122 122  2       21     346765  332232   223 367888889999999999999999888


Q ss_pred             HHHHHHHhCCCCCCCCCcEEEeecCCCCCCCccccCCCCCccccccccCcccccCCCCCCCCCccccccCCCccCCCCcc
Q psy10795        245 MRLFRHFLGGAYIIPEPIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRL  324 (412)
Q Consensus       245 l~~L~~~~g~~~~~~~~~~~~~~~W~~dp~~~G~ys~~~pg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~~~~  324 (412)
                      ......+++.  .+++|.-...|+|.        |+.+  .+                           +.+        
T Consensus       257 ~aA~~~~~~~--~~~~p~~s~~H~Wr--------YA~P--~~---------------------------~~~--------  289 (331)
T COG3380         257 RAAAQELDGD--RLPEPDWSDAHRWR--------YAIP--ND---------------------------AVA--------  289 (331)
T ss_pred             HHhhhhccCC--CCCcchHHHhhccc--------cccc--cc---------------------------ccc--------
Confidence            8888888874  46788888899997        4443  22                           110        


Q ss_pred             CcchHHhccccccCCCCceEEEecccccCcCcccchhhhhccHHHHHHHHHHH
Q psy10795        325 NTSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVYL  377 (412)
Q Consensus       325 ~~~~~~l~~p~~~~~~~~~l~fAGe~t~~~~~g~~eGA~~SG~raA~~i~~~l  377 (412)
                        .....+.+-      .+||++||+|++   |.+|||++||..+|++|++.|
T Consensus       290 --~~~L~ad~~------~~l~~cGDwc~G---grVEgA~LSGlAaA~~i~~~L  331 (331)
T COG3380         290 --GPPLDADRE------LPLYACGDWCAG---GRVEGAVLSGLAAADHILNGL  331 (331)
T ss_pred             --CCccccCCC------CceeeecccccC---cchhHHHhccHHHHHHHHhcC
Confidence              000111222      279999999999   889999999999999998764

>PLN02487 zeta-carotene desaturase

Probab=99.63  E-value=1.1e-14  Score=151.22  Aligned_cols=227  Identities=11%  Similarity=0.069  Sum_probs=141.1

Q ss_pred             CCCcEEcCCeEEEEEecC-CCc---E-EEEe---CCCcEEEeCEEEEeCChhhhhcCcccccCCCcH--HHHHHHhcCCC
Q psy10795         88 LSNKILYKKEVNKIDWEY-QNG---A-AVSC---SDGSVYTAYKIIITVPLGVLKSKLITFVPSLPA--QKLNAIEGLNF  157 (412)
Q Consensus        88 ~~~~I~ln~~V~~I~~~~-~~~---V-~V~~---~~G~~~~ad~VIvTvP~~~L~~~~i~f~P~Lp~--~k~~ai~~l~~  157 (412)
                      .|++|+++++|++|..+. +++   | .|++   .+++++.+|+||+|+|+..+++.    .|..+.  ...+.+.++.+
T Consensus       308 ~Gg~V~l~~~V~~I~~~~~~~g~~~v~gv~~~~~~~~~~~~aD~VV~A~p~~~~~~L----lp~~~~~~~~~~~l~~L~~  383 (569)
T PLN02487        308 RGGRFHLRWGCREILYDKSPDGETYVTGLKVSKATEKEIVKADAYVAACDVPGIKRL----LPEQWREYEFFDNIYKLVG  383 (569)
T ss_pred             cCCEEEeCCceEEEEEecCCCCceeEEEEEEecCCCceEEECCEEEECCCHHHHHHh----CCchhhccHHHhHHhcCCC
Confidence            488999999999999831 233   2 3455   33457899999999999999873    344322  23567888989


Q ss_pred             cceeEEEEEcCCCccCCCCCceeEeecCCCccccccccc--cCCCCCccc--cc-----cceeecCCCCcEEEEEecccc
Q psy10795        158 GTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMV--HVDGKPWVW--GI-----LGFYMDAEDPLTLLGWIAGPT  228 (412)
Q Consensus       158 g~~~KV~l~f~~~fW~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~w~~--~~-----~~~~~~~~~~~vL~~~~~g~~  228 (412)
                      .+++.|.|.|+++.=...  ....   +..+..+.|...  ......|..  .+     -+++. .....+|.+++..  
T Consensus       384 ~pi~tv~L~~d~~v~~~~--~~~~---~r~l~~~~g~~~~~~~~~~~~~f~~di~l~~~~~~~~-~~~g~~l~~vis~--  455 (569)
T PLN02487        384 VPVVTVQLRYNGWVTEMQ--DLEL---SRQLRRAAGLDNLLYSADADFSCFADLALTSPEDYYK-EGEGSLIQAVLTP--  455 (569)
T ss_pred             eeEEEEEEEecccccccc--cccc---cccccccccccccccccCCCcceEeeeecCCHHHHcc-cCCceEEEEEEcC--
Confidence            999999999998652211  0000   000000000000  000112322  00     00111 1123567777775  


Q ss_pred             hHHHhcCCHHHHHHHHHHHHHHHhCCCCCCCCCcEEEeecCCCCCCCccccCCCCCccccccccCcccccCCCCCCCCCc
Q psy10795        229 ARYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLC  308 (412)
Q Consensus       229 a~~~~~lsdeel~~~~l~~L~~~~g~~~~~~~~~~~~~~~W~~dp~~~G~ys~~~pg~~~~~~~~~~~~~~~~~~~~p~~  308 (412)
                      ++.+..++++++++.++++|+++||.. ....+..+.+.+..+     ..|.. .||+.                     
T Consensus       456 a~~~~~~~~~ei~~~~~~~L~~~~p~~-~~~~v~~~~vv~~~~-----at~~~-~pg~~---------------------  507 (569)
T PLN02487        456 GDPYMPLSNDKIVEKVHKQVLELFPSS-RGLEVTWSSVVKIGQ-----SLYRE-APGMD---------------------  507 (569)
T ss_pred             CccccCCCHHHHHHHHHHHHHHhCccc-ccCceEEEEEEEccC-----ceecc-CCCcc---------------------
Confidence            356889999999999999999999852 112344544555443     33333 24421                     


Q ss_pred             cccccCCCccCCCCccCcchHHhccccccCCCCceEEEecccccCcCcccchhhhhccHHHHHHHHHHH
Q psy10795        309 RRSYQPTSLRNGSDRLNTSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVYL  377 (412)
Q Consensus       309 ~~~~~~~g~~~~~~~~~~~~~~l~~p~~~~~~~~~l~fAGe~t~~~~~g~~eGA~~SG~raA~~i~~~l  377 (412)
                                       ..++..+.|+.      +||+|||+|+..|+.+||||++||.+||+.|++..
T Consensus       508 -----------------~~RP~~~T~~~------nl~LAGD~t~~~yPat~EgAv~SG~~AA~~i~~~~  553 (569)
T PLN02487        508 -----------------PFRPDQKTPIS------NFFLAGSYTKQDYIDSMEGATLSGRQAAAYICEAG  553 (569)
T ss_pred             -----------------ccCCCCCCCCC------CEEEeCcccccCCcchHHHHHHHHHHHHHHHHHHh
Confidence                             11223345653      89999999999999999999999999999998765

>TIGR02732 zeta_caro_desat carotene 7,8-desaturase

Probab=99.63  E-value=6.9e-15  Score=150.95  Aligned_cols=223  Identities=13%  Similarity=0.103  Sum_probs=133.7

Q ss_pred             CCcEEcCCeEEEEEecCC--Cc---E-EEEeCCC---cEEEeCEEEEeCChhhhhcCcccccCCCc--HHHHHHHhcCCC
Q psy10795         89 SNKILYKKEVNKIDWEYQ--NG---A-AVSCSDG---SVYTAYKIIITVPLGVLKSKLITFVPSLP--AQKLNAIEGLNF  157 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~--~~---V-~V~~~~G---~~~~ad~VIvTvP~~~L~~~~i~f~P~Lp--~~k~~ai~~l~~  157 (412)
                      |++|+++++|++|.. ++  ++   | .|.+.+|   +++.||+||+|+|...+++.    .|+++  ....+.+..+.+
T Consensus       233 Gg~i~~~~~V~~I~~-~~~~~~~~~v~~v~~~~g~~~~~~~aD~VVlA~p~~~~~~L----l~~~~~~~~~~~~l~~l~~  307 (474)
T TIGR02732       233 GGKFHLRHKVREIKY-EKSSDGSTRVTGLIMSKPEGKKVIKADAYVAACDVPGIKRL----LPQEWRQFEEFDNIYKLDA  307 (474)
T ss_pred             CCEEECCCEEEEEEE-ecCCCCceeEEEEEEecCCcceEEECCEEEECCChHHHHhh----CChhhhcCHHHhhHhcCCC
Confidence            789999999999987 43  22   3 2334433   56899999999999999983    23332  135667889999


Q ss_pred             cceeEEEEEcCCCccCCCC-CceeEeecCCCccccccccccCCCCCccc--c-----ccceeecCCCCcEEEEEecccch
Q psy10795        158 GTVDKIFIRFPAKWWKDGC-QGFNFYWTQQDKMDLFKDMVHVDGKPWVW--G-----ILGFYMDAEDPLTLLGWIAGPTA  229 (412)
Q Consensus       158 g~~~KV~l~f~~~fW~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~w~~--~-----~~~~~~~~~~~~vL~~~~~g~~a  229 (412)
                      .++..|.|.|+++.=.... .....+ ...  ..+..- .......|..  .     .-++.. +....+|.+++..  +
T Consensus       308 ~pi~~v~l~~~~~v~~~~~~~~~~~l-~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~--~  380 (474)
T TIGR02732       308 VPVATVQLRYDGWVTELQDLAKRKQL-KRA--AGLDNL-LYTADADFSCFADLALTSPDDYYK-EGQGSLLQCVLTP--G  380 (474)
T ss_pred             CCeEEEEEEeccccccccchhhhhcc-ccc--cccccc-ccccCccceeeehhhccCHHHHhc-cCCCeEEEEEEeC--h
Confidence            9999999999975421110 000000 000  000000 0000112221  0     001111 2223446666654  3


Q ss_pred             HHHhcCCHHHHHHHHHHHHHHHhCCCCCCCCCcEEEeecCCCCCCCccccCCCCCccccccccCcccccCCCCCCCCCcc
Q psy10795        230 RYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCR  309 (412)
Q Consensus       230 ~~~~~lsdeel~~~~l~~L~~~~g~~~~~~~~~~~~~~~W~~dp~~~G~ys~~~pg~~~~~~~~~~~~~~~~~~~~p~~~  309 (412)
                      ..+..++++++++.++++|+++||. .....+....+.+..+     ..|+. .||..           .+         
T Consensus       381 ~~~~~~~~~~l~~~~~~~L~~~~p~-~~~~~~~~~~v~~~~~-----a~~~~-~pg~~-----------~~---------  433 (474)
T TIGR02732       381 DPWMPESNEEIAKRVDKQVRALFPS-SKNLKLTWSSVVKLAQ-----SLYRE-APGMD-----------PF---------  433 (474)
T ss_pred             hhhcCCCHHHHHHHHHHHHHHhCcc-ccCCceeEEEEEEecC-----ceecc-CCCCc-----------cc---------
Confidence            4677899999999999999999984 2222344444444332     22222 23321           11         


Q ss_pred             ccccCCCccCCCCccCcchHHhccccccCCCCceEEEecccccCcCcccchhhhhccHHHHHHHH
Q psy10795        310 RSYQPTSLRNGSDRLNTSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAI  374 (412)
Q Consensus       310 ~~~~~~g~~~~~~~~~~~~~~l~~p~~~~~~~~~l~fAGe~t~~~~~g~~eGA~~SG~raA~~i~  374 (412)
                                        ++....|+      ++||+|||+|+..|+.+||||++||++||+.|+
T Consensus       434 ------------------~P~~~t~~------~~l~lAGD~t~~~~pas~egAv~sG~~aA~~i~  474 (474)
T TIGR02732       434 ------------------RPDQKTPI------SNFFLAGSYTQQDYIDSMEGATLSGRQAAAAIL  474 (474)
T ss_pred             ------------------CCCCCCCC------CCeEEeccccccCchHHHhHHHHHHHHHHHHhC
Confidence                              11223444      489999999999999999999999999999874

Carotene 7,8-desaturase, also called zeta-carotene desaturase, catalyzes multiple steps in the pathway from geranylgeranyl-PP to all-trans-lycopene in plants and cyanobacteria. A similar enzyme and pathway is found in the green sulfur bacterium Chlorobium tepidum.

>COG1232 HemY Protoporphyrinogen oxidase [Coenzyme metabolism]

Probab=99.54  E-value=6.3e-14  Score=140.34  Aligned_cols=237  Identities=16%  Similarity=0.159  Sum_probs=168.5

Q ss_pred             eEeccCCcceeeecCCcCCCCCCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChhhhhcCcccccCCCcHH
Q psy10795         68 FYMDAEDPLTLLVSGQTPVDLSNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQ  147 (412)
Q Consensus        68 f~~v~~~p~vl~~~~~~~~~~~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~~L~~~~i~f~P~Lp~~  147 (412)
                      |........+|+.++.+.+  ..+|+++++|+.|.. +..++++.+.+|..++||.||+|+|++.|...   + ++  ..
T Consensus       207 ~~~~~gG~~~l~~al~~~l--~~~i~~~~~V~~i~~-~~~~~~~~~~~g~~~~~D~VI~t~p~~~l~~l---l-~~--~~  277 (444)
T COG1232         207 FGYLRGGLQSLIEALAEKL--EAKIRTGTEVTKIDK-KGAGKTIVDVGGEKITADGVISTAPLPELARL---L-GD--EA  277 (444)
T ss_pred             ccccCccHHHHHHHHHHHh--hhceeecceeeEEEE-cCCccEEEEcCCceEEcceEEEcCCHHHHHHH---c-CC--cc
Confidence            3334444457777887777  455999999999999 77788888999989999999999999999982   3 33  23


Q ss_pred             HHHHHhcCCCcceeEEEEEcCCCccCCCCCceeEeecCCCccccccccccCCCCCccccccceeecCCCCcEEEEEeccc
Q psy10795        148 KLNAIEGLNFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWIAGP  227 (412)
Q Consensus       148 k~~ai~~l~~g~~~KV~l~f~~~fW~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~w~~~~~~~~~~~~~~~vL~~~~~g~  227 (412)
                      ...++.++.+.+...|.+.|+++--.....+++++..+++.. +.       ...|.+..+++.. +.+..++.+++.+.
T Consensus       278 ~~~~~~~~~~~s~~~vv~~~~~~~~~~~~~~~g~~iad~~~~-~~-------a~~~~S~~~p~~~-p~g~~ll~~~~~~~  348 (444)
T COG1232         278 VSKAAKELQYTSVVTVVVGLDEKDNPALPDGYGLLIADDDPY-IL-------AITFHSNKWPHEA-PEGKTLLRVEFGGP  348 (444)
T ss_pred             hhhhhhhccccceEEEEEEeccccccCCCCceEEEEecCCCc-ce-------eEEEecccCCCCC-CCCcEEEEEEeecC
Confidence            456889999999999999999862222234555555665431 11       3567766554432 33445777888877


Q ss_pred             chHHHhcCCHHHHHHHHHHHHHHHhCCCCCCCCCcEEEeecCCCCCCCccccCCCCCccccccccCcccccCCCCCCCCC
Q psy10795        228 TARYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPL  307 (412)
Q Consensus       228 ~a~~~~~lsdeel~~~~l~~L~~~~g~~~~~~~~~~~~~~~W~~dp~~~G~ys~~~pg~~~~~~~~~~~~~~~~~~~~p~  307 (412)
                      .-+....++|||+++.++++|.++++.   ..+|....++||..      ++..+                         
T Consensus       349 g~~~~~~~~dee~~~~~l~~L~~~~~~---~~~~~~~~v~r~~~------~~PqY-------------------------  394 (444)
T COG1232         349 GDESVSTMSDEELVAAVLDDLKKLGGI---NGDPVFVEVTRWKY------AMPQY-------------------------  394 (444)
T ss_pred             CCcchhccCHHHHHHHHHHHHHHHcCc---Ccchhheeeeeccc------cCCcc-------------------------
Confidence            777788899999999999999999985   34666888889973      34433                         


Q ss_pred             ccccccCCCccCCCCccCcchHHhccccccCCCCceEEEecccccCcCcccchhhhhccHHHHHHHH
Q psy10795        308 CRRSYQPTSLRNGSDRLNTSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAI  374 (412)
Q Consensus       308 ~~~~~~~~g~~~~~~~~~~~~~~l~~p~~~~~~~~~l~fAGe~t~~~~~g~~eGA~~SG~raA~~i~  374 (412)
                            .+||   .    +....++..+..  ..|+|+.+|-+....   .+.+++.+|..||++++
T Consensus       395 ------~vG~---~----~~~~~ir~~l~~--~y~gi~~~G~~~~g~---g~~d~I~~g~~aa~~l~  443 (444)
T COG1232         395 ------EVGH---L----DRLEPIRAALKG--AYPGIKSVGRYGEGV---GLPDCIAAGKEAAEQLL  443 (444)
T ss_pred             ------chhH---H----HHHHHHHHhhcc--ccCCeEEeccCCCCC---CchHHHHHHHHHHHHhh
Confidence                  3442   1    223334443320  115899999988772   48999999999999886

>PRK07208 hypothetical protein; Provisional

Probab=99.53  E-value=2.5e-13  Score=139.86  Aligned_cols=297  Identities=14%  Similarity=0.121  Sum_probs=170.3

Q ss_pred             CCccccceEEEEcCCCCccCCCcceEeeeccCCccccc-cccccc-CC----------CCceeeeeeeEeccCCcceeee
Q psy10795         13 LNFGTVDKIFIRFPAKWWKDGCQGFNLYWTQQDKTDLF-KDMVHV-DG----------KPWVWGILGFYMDAEDPLTLLV   80 (412)
Q Consensus        13 lgfgt~~Kifl~f~~~~w~~~~~~~~~~W~~~d~~~l~-~~~~~~-~~----------~~W~~~i~gf~~v~~~p~vl~~   80 (412)
                      +|=...++++..|.+..|..++..+.+.|.-....... ...+.+ ..          .........|.........|..
T Consensus       143 ~g~~~~~~~~~p~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gG~~~l~~  222 (479)
T PRK07208        143 FGRRLYSTFFKGYTEKVWGVPCDEISADWAAQRIKGLSLGKAIRNALRRSLGLKRRNKEVETSLIEEFRYPKLGPGQLWE  222 (479)
T ss_pred             hCHHHHHHHHHHhhhhhhCCChHHCCChHHhCcccCCCHHHHHHHHhhhcccccccCCCccccceeEEeCCCCCcchHHH
Confidence            34444667777888888888888888777554432100 000000 00          0000000112111112223444


Q ss_pred             cCCcCCC-CCCcEEcCCeEEEEEecCCCcE-E-EEe--CCCc--EEEeCEEEEeCChhhhhcCcccccCCCcHHHHHHHh
Q psy10795         81 SGQTPVD-LSNKILYKKEVNKIDWEYQNGA-A-VSC--SDGS--VYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNAIE  153 (412)
Q Consensus        81 ~~~~~~~-~~~~I~ln~~V~~I~~~~~~~V-~-V~~--~~G~--~~~ad~VIvTvP~~~L~~~~i~f~P~Lp~~k~~ai~  153 (412)
                      ++.+.+. .+.+|++|++|++|.. +++++ . ++.  .+|+  ++.||+||+|+|+..+.+.   +.|++|+.+.++++
T Consensus       223 ~L~~~l~~~g~~i~~~~~V~~I~~-~~~~~v~~~~~~~~~g~~~~~~ad~VI~a~p~~~l~~~---l~~~~~~~~~~~~~  298 (479)
T PRK07208        223 TAAEKLEALGGKVVLNAKVVGLHH-DGDGRIAVVVVNDTDGTEETVTADQVISSMPLRELVAA---LDPPPPPEVRAAAA  298 (479)
T ss_pred             HHHHHHHHcCCEEEeCCEEEEEEE-cCCcEEEEEEEEcCCCCEEEEEcCEEEECCCHHHHHHh---cCCCCCHHHHHHHh
Confidence            4444332 2678999999999998 66653 2 332  3453  5889999999999999873   45678888888999


Q ss_pred             cCCCcceeEEEEEcCCCccCCCCCceeEeecCCCccccccccccCCCCCccccccceeecCCCC-cEEE-EEecccchHH
Q psy10795        154 GLNFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDP-LTLL-GWIAGPTARY  231 (412)
Q Consensus       154 ~l~~g~~~KV~l~f~~~fW~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~w~~~~~~~~~~~~~~-~vL~-~~~~g~~a~~  231 (412)
                      ++.|.++.+|.+.|+++.+...  ...++ ++.+.  ..+..  .....|...     ..+.+. ..+. .+.... ...
T Consensus       299 ~l~~~~~~~v~l~~~~~~~~~~--~~~~~-~~~~~--~~~r~--~~~~~~~~~-----~~p~g~~~~l~~~~~~~~-~~~  365 (479)
T PRK07208        299 GLRYRDFITVGLLVKELNLFPD--NWIYI-HDPDV--KVGRL--QNFNNWSPY-----LVPDGRDTWLGLEYFCFE-GDD  365 (479)
T ss_pred             CCCcceeEEEEEEecCCCCCCC--ceEEe-cCCCC--cccee--cccccCCcc-----cCCCCCceEEEEEEEccC-CCc
Confidence            9999999999999998854321  11122 22111  01110  001122211     112222 2222 333222 234


Q ss_pred             HhcCCHHHHHHHHHHHHHHHhCCCCCCCCCcEEEeecCCCCCCCccccCCCCCccccccccCcccccCCCCCCCCCcccc
Q psy10795        232 METLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRS  311 (412)
Q Consensus       232 ~~~lsdeel~~~~l~~L~~~~g~~~~~~~~~~~~~~~W~~dp~~~G~ys~~~pg~~~~~~~~~~~~~~~~~~~~p~~~~~  311 (412)
                      ++.++|+++++.++++|.++...  ....+....+.+|.      .+|..+.                            
T Consensus       366 ~~~~~deel~~~~~~~L~~l~~~--~~~~~~~~~v~r~~------~a~P~y~----------------------------  409 (479)
T PRK07208        366 LWNMSDEDLIALAIQELARLGLI--RPADVEDGFVVRVP------KAYPVYD----------------------------  409 (479)
T ss_pred             cccCCHHHHHHHHHHHHHHcCCC--ChhheeEEEEEEec------CcccCCC----------------------------
Confidence            67899999999999999997321  13356677777775      2344332                            


Q ss_pred             ccCCCccCCCCccCcchHHhccccccCCCCceEEEecccccCcCcccchhhhhccHHHHHHHHHH
Q psy10795        312 YQPTSLRNGSDRLNTSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVY  376 (412)
Q Consensus       312 ~~~~g~~~~~~~~~~~~~~l~~p~~~~~~~~~l~fAGe~t~~~~~g~~eGA~~SG~raA~~i~~~  376 (412)
                         .||   .+.+... ..+.++.      ++|+|||++....+ .+|++|+.||.++|++|++.
T Consensus       410 ---~~~---~~~~~~~-~~~~~~~------~~l~laGr~~~~~~-~~~d~a~~sg~~~a~~i~~~  460 (479)
T PRK07208        410 ---GTY---ERNVEII-RDLLDHF------PNLHLVGRNGMHRY-NNQDHSMLTAMLAVENIIAG  460 (479)
T ss_pred             ---chH---HHHHHHH-HHHHHhc------CCceeecccccccc-CChhHHHHHHHHHHHHHhcC
Confidence               221   0011011 1122344      48999999876655 68999999999999998876

>KOG0685|consensus

Probab=99.51  E-value=8e-15  Score=143.90  Aligned_cols=73  Identities=30%  Similarity=0.560  Sum_probs=65.8

Q ss_pred             hhhHHHHhhcCCccccceEEEEcCCCCccCCCcceEeeeccCCcccccccccccCCCCceeeeeeeEeccCCcceeee
Q psy10795          3 QIALGTLLQGLNFGTVDKIFIRFPAKWWKDGCQGFNLYWTQQDKTDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLV   80 (412)
Q Consensus         3 ~~~~~~ai~~lgfgt~~Kifl~f~~~~w~~~~~~~~~~W~~~d~~~l~~~~~~~~~~~W~~~i~gf~~v~~~p~vl~~   80 (412)
                      +-.|++||++|||||||||||||++|||+.+|.+|+++|.+++..++...     ...|.+++++|+++...|++|..
T Consensus       300 P~~K~~AIe~lgfGtv~KiFLE~E~pfwp~~~~~i~~lw~~e~l~e~r~~-----~~~w~~~~~~f~~v~~~~~vL~g  372 (498)
T KOG0685|consen  300 PAEKQRAIERLGFGTVNKIFLEFEEPFWPSDWNGIQLLWLDEDLEELRST-----LDAWEEDIMGFQPVSWAPNVLLG  372 (498)
T ss_pred             CHHHHHHHHhccCCccceEEEEccCCCCCCCCceeEEEEecCcHHHHhhh-----hHHHHhhceEEEEcCcchhhhhe
Confidence            45899999999999999999999999999999999999999997776553     46799999999999999987753

>TIGR02733 desat_CrtD C-3',4' desaturase CrtD

Probab=98.95  E-value=1.5e-08  Score=104.88  Aligned_cols=95  Identities=15%  Similarity=0.046  Sum_probs=68.5

Q ss_pred             CCcceeeecCCcCCC-CCCcEEcCCeEEEEEecCCCcE-EEEeCCC-----cEEEeCEEEEeCChhhhhcCcccccCCCc
Q psy10795         73 EDPLTLLVSGQTPVD-LSNKILYKKEVNKIDWEYQNGA-AVSCSDG-----SVYTAYKIIITVPLGVLKSKLITFVPSLP  145 (412)
Q Consensus        73 ~~p~vl~~~~~~~~~-~~~~I~ln~~V~~I~~~~~~~V-~V~~~~G-----~~~~ad~VIvTvP~~~L~~~~i~f~P~Lp  145 (412)
                      +....|..++++.+. .+++|++|++|++|.. +++++ .|.+.+|     +++.||+||+|+|+..+.+  +...|.+|
T Consensus       229 GG~~~l~~aL~~~~~~~G~~i~~~~~V~~I~~-~~~~~~gv~~~~~~~~~~~~~~ad~VI~~~~~~~~~~--ll~~~~~~  305 (492)
T TIGR02733       229 GSMQTLSDRLVEALKRDGGNLLTGQRVTAIHT-KGGRAGWVVVVDSRKQEDLNVKADDVVANLPPQSLLE--LLGPLGLP  305 (492)
T ss_pred             CcHHHHHHHHHHHHHhcCCEEeCCceEEEEEE-eCCeEEEEEEecCCCCceEEEECCEEEECCCHHHHHH--hcCcccCC
Confidence            333456556655443 3789999999999998 55542 2333333     5789999999999999987  23346778


Q ss_pred             HHHHHHHhcCCCcc-eeEEEEEcCCC
Q psy10795        146 AQKLNAIEGLNFGT-VDKIFIRFPAK  170 (412)
Q Consensus       146 ~~k~~ai~~l~~g~-~~KV~l~f~~~  170 (412)
                      +...+.++++.+.+ ..++++.+++.
T Consensus       306 ~~~~~~~~~~~~s~~~~~v~l~~~~~  331 (492)
T TIGR02733       306 PGYRKRLKKLPEPSGAFVFYLGVKRA  331 (492)
T ss_pred             HHHHHHHhcCCCCCceEEEEEeeccc
Confidence            77777788888877 45889999873

Members of this family are slr1293, a carotenoid biosynthesis protein which was shown to be the C-3',4' desaturase (CrtD) of myxoxanthophyll biosynthesis in Synechocystis sp. strain PCC 6803, and close homologs (presumed to be functionally equivalent) from other cyanobacteria, where myxoxanthophyll biosynthesis is either known or expected. This enzyme can act on neurosporene and so presumably catalyzes the first step that is committed to myxoxanthophyll.

>KOG1276|consensus

Probab=98.70  E-value=1.7e-07  Score=91.56  Aligned_cols=222  Identities=14%  Similarity=0.128  Sum_probs=145.2

Q ss_pred             CcEEcCCeEEEEEecCCCcEEEEeC--CCcE-EEeCEEEEeCChhhhhcCcccccCCCcHHHHHHHhcCCCcceeEEEEE
Q psy10795         90 NKILYKKEVNKIDWEYQNGAAVSCS--DGSV-YTAYKIIITVPLGVLKSKLITFVPSLPAQKLNAIEGLNFGTVDKIFIR  166 (412)
Q Consensus        90 ~~I~ln~~V~~I~~~~~~~V~V~~~--~G~~-~~ad~VIvTvP~~~L~~~~i~f~P~Lp~~k~~ai~~l~~g~~~KV~l~  166 (412)
                      ..|.++.+|..|.....++|.+++.  ++++ ...+++..|+|..++.+.    .|++.+....++.++.|-++.-|.+.
T Consensus       264 v~i~~~~~~~~~sk~~~~~~~~tl~~~~~~~~~~~~~~~~t~~~~k~a~l----l~~~~~sls~~L~ei~y~~V~vVn~~  339 (491)
T KOG1276|consen  264 VSISLGLKLSGNSKSRSGNWSLTLVDHSGTQRVVVSYDAATLPAVKLAKL----LRGLQNSLSNALSEIPYVPVAVVNTY  339 (491)
T ss_pred             hhhhcccccccccccccCCceeEeEcCCCceeeeccccccccchHHhhhh----ccccchhhhhhhhcCCCCceEEEEEe
Confidence            3578888888888745566776654  4543 467778889999999983    56677778889999999999999999


Q ss_pred             cCCCccCCCCCceeEeecCCCccccccccccCCCCCccccccceeecCCCCcEEEEEecccchHH--HhcCCHHHHHHHH
Q psy10795        167 FPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWIAGPTARY--METLPMAVLQADI  244 (412)
Q Consensus       167 f~~~fW~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~w~~~~~~~~~~~~~~~vL~~~~~g~~a~~--~~~lsdeel~~~~  244 (412)
                      |.++--.-+..||+++.+.+...   +  .++-+..+.+.+|+...   .+..++..++|.+...  +...+.||+++.+
T Consensus       340 yp~~~~~~pl~GFG~LvPs~~~~---~--~~~LG~ifdS~~Fp~~~---~s~~vtvm~gg~~~~n~~~~~~S~ee~~~~v  411 (491)
T KOG1276|consen  340 YPKEKIDLPLQGFGLLVPSEPKN---G--FKTLGTIFDSMLFPDRS---PSPKVTVMMGGGGSTNTSLAVPSPEELVNAV  411 (491)
T ss_pred             ccCcccccccccceeeccCCCCC---C--CceeEEEeecccCCCCC---CCceEEEEecccccccCcCCCCCHHHHHHHH
Confidence            99863223467899886632211   0  01112344444443221   2225666665555442  3456899999999


Q ss_pred             HHHHHHHhCCCCCCCCCcEEEeecCCCCCCCccccCCCCCccccccccCcccccCCCCCCCCCccccccCCCccCCCCcc
Q psy10795        245 MRLFRHFLGGAYIIPEPIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRL  324 (412)
Q Consensus       245 l~~L~~~~g~~~~~~~~~~~~~~~W~~dp~~~G~ys~~~pg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~~~~  324 (412)
                      .++|+++++.   -..|....++-|.+          +.|-                      +     .+||   .+.+
T Consensus       412 ~~alq~~Lgi---~~~P~~~~v~l~~~----------ciPq----------------------y-----~vGh---~~~l  448 (491)
T KOG1276|consen  412 TSALQKMLGI---SNKPVSVNVHLWKN----------CIPQ----------------------Y-----TVGH---DDVL  448 (491)
T ss_pred             HHHHHHHhCC---CCCcccccceehhh----------cccc----------------------e-----ecch---HHHH
Confidence            9999999995   22576666666764          2221                      1     4664   2222


Q ss_pred             CcchHHhccccccCCCCceEEEecccccCcCcccchhhhhccHHHHHHHH
Q psy10795        325 NTSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAI  374 (412)
Q Consensus       325 ~~~~~~l~~p~~~~~~~~~l~fAGe~t~~~~~g~~eGA~~SG~raA~~i~  374 (412)
                      +....-+...-+     .+|+.+|.|+.+..   +..+++||.++|.+++
T Consensus       449 e~a~~~l~~~~g-----~~l~l~G~~y~Gv~---vgdcI~sg~~~A~~v~  490 (491)
T KOG1276|consen  449 EAAKSMLTDSPG-----LGLFLGGNHYGGVS---VGDCIESGRKTAVEVI  490 (491)
T ss_pred             HHHHHHHHhCCC-----CceEeeccccCCCC---hhHHHHhhHHHHHhhc
Confidence            222222322221     37999999999843   8889999999998875

>TIGR02734 crtI_fam phytoene desaturase

Probab=98.65  E-value=4e-07  Score=94.50  Aligned_cols=77  Identities=13%  Similarity=0.096  Sum_probs=56.3

Q ss_pred             CCcEEcCCeEEEEEecCCCc-EEEEeCCCcEEEeCEEEEeCChhhhhcCcccccCCC-cHHHHHHHhcCCC-cceeEEEE
Q psy10795         89 SNKILYKKEVNKIDWEYQNG-AAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSL-PAQKLNAIEGLNF-GTVDKIFI  165 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~-V~V~~~~G~~~~ad~VIvTvP~~~L~~~~i~f~P~L-p~~k~~ai~~l~~-g~~~KV~l  165 (412)
                      |.+|+++++|++|.. ++++ +.|++.+|+++.||+||+|+|+..+...+  ..+.+ |....+.++++.+ .+..++++
T Consensus       233 G~~i~~~~~V~~i~~-~~~~~~~V~~~~g~~~~ad~VI~a~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~s~s~~~~~l  309 (502)
T TIGR02734       233 GGELRLNAEVIRIET-EGGRATAVHLADGERLDADAVVSNADLHHTYRRL--LPNHPRRRYPAARLSRKRPSPSLFVLYF  309 (502)
T ss_pred             CCEEEECCeEEEEEe-eCCEEEEEEECCCCEEECCEEEECCcHHHHHHHh--cCccccccccccccccCCcCCeeeEEEE
Confidence            779999999999998 5555 57888899899999999999997766522  22333 2233345566654 45778888


Q ss_pred             EcC
Q psy10795        166 RFP  168 (412)
Q Consensus       166 ~f~  168 (412)
                      .++
T Consensus       310 gl~  312 (502)
T TIGR02734       310 GLL  312 (502)
T ss_pred             eec
Confidence            988

Phytoene is converted to lycopene by desaturation at four (two symmetrical pairs of) sites. This is achieved by two enzymes (crtP and crtQ) in cyanobacteria (Gloeobacter being an exception) and plants, but by a single enzyme in most other bacteria and in fungi. This single enzyme is called the bacterial-type phytoene desaturase, or CrtI. Most members of this family, part of the larger Pfam family pfam01593, which also contains amino oxidases, are CrtI itself; it is likely that all members act on either phytoene or on related compounds such as dehydrosqualene, for carotenoid biosynthesis.

>TIGR02730 carot_isom carotene isomerase

Probab=98.59  E-value=2e-06  Score=89.03  Aligned_cols=79  Identities=18%  Similarity=0.177  Sum_probs=54.9

Q ss_pred             CCcEEcCCeEEEEEecCCCc-EEEEeCCCcEEEeCEEEEeCChh-hhhcCcccccCCCcHHHHHHHhcCCCc-ceeEEEE
Q psy10795         89 SNKILYKKEVNKIDWEYQNG-AAVSCSDGSVYTAYKIIITVPLG-VLKSKLITFVPSLPAQKLNAIEGLNFG-TVDKIFI  165 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~-V~V~~~~G~~~~ad~VIvTvP~~-~L~~~~i~f~P~Lp~~k~~ai~~l~~g-~~~KV~l  165 (412)
                      |.+|+++++|++|.. ++++ +.|.+.+|++++||+||+++.+. .+.++ + =...+|......++++.++ +..++++
T Consensus       243 G~~i~~~~~V~~I~~-~~~~~~gv~~~~g~~~~ad~vV~a~~~~~~~~~L-l-~~~~~~~~~~~~~~~~~~s~s~~~~~l  319 (493)
T TIGR02730       243 GGQIRYRARVTKIIL-ENGKAVGVKLADGEKIYAKRIVSNATRWDTFGKL-L-KAENLPKKEKNWQRNYVKSPSFLSLHL  319 (493)
T ss_pred             CCEEEeCCeeeEEEe-cCCcEEEEEeCCCCEEEcCEEEECCChHHHHHHh-C-CccccchhhHHHHhhccCCCceEEEEE
Confidence            789999999999998 5554 46778889889999999988654 44442 1 0112343333444555554 4888999


Q ss_pred             EcCCC
Q psy10795        166 RFPAK  170 (412)
Q Consensus       166 ~f~~~  170 (412)
                      ..+..
T Consensus       320 ~l~~~  324 (493)
T TIGR02730       320 GVKAD  324 (493)
T ss_pred             EecCc
Confidence            99874

Members of this family, including sll0033 (crtH) of Synechocystis sp. PCC 6803, catalyze a cis-trans isomerization of carotenes to the all-trans lycopene, a reaction that can also occur non-enzymatically in light through photoisomerization.

>COG3349 Uncharacterized conserved protein [Function unknown]

Probab=97.80  E-value=5.8e-05  Score=76.30  Aligned_cols=221  Identities=15%  Similarity=0.152  Sum_probs=120.6

Q ss_pred             CCcEEcCCeEEEEEecCCCc-----EEEEeCCCcE---EEeCEEEEeCChhhhhcCcccccCC-Cc-HHHHHHHhcCCCc
Q psy10795         89 SNKILYKKEVNKIDWEYQNG-----AAVSCSDGSV---YTAYKIIITVPLGVLKSKLITFVPS-LP-AQKLNAIEGLNFG  158 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~-----V~V~~~~G~~---~~ad~VIvTvP~~~L~~~~i~f~P~-Lp-~~k~~ai~~l~~g  158 (412)
                      +.+++.+.+|+.|.. +...     +.+... +..   ..++.++.+.....++..    .|. .+ ...-.-|..+..-
T Consensus       229 G~~v~~~~pv~~l~l-~~~~~~~~~~g~~~~-~~~~e~~~~~~~~~~~~v~~~~~~----~ps~W~~~~~f~~ly~l~~~  302 (485)
T COG3349         229 GRKVHADYPVKELDL-DGARGLAKVTGGDVT-GPEQEQQAALAVVDAFAVQRFKRD----LPSEWPKWSNFDGLYGLRLV  302 (485)
T ss_pred             Cceeeccceeeeeec-cccccccceEeeeec-CcceEeeehhhhhcccccchHhhc----Cccccccccccccccccccc
Confidence            678999999999998 4311     223222 433   345666666666666552    221 11 1223456677889


Q ss_pred             ceeEEEEEcCCCccCCCC--Ccee---EeecCCCccccccccccCCCCCccccc--cceeecCCCCcEEEEEecccchHH
Q psy10795        159 TVDKIFIRFPAKWWKDGC--QGFN---FYWTQQDKMDLFKDMVHVDGKPWVWGI--LGFYMDAEDPLTLLGWIAGPTARY  231 (412)
Q Consensus       159 ~~~KV~l~f~~~fW~~~~--~~~~---~~~~~~~~~~~~g~~~~~~~~~w~~~~--~~~~~~~~~~~vL~~~~~g~~a~~  231 (412)
                      +.+++.+.|+..-|..+.  ..+.   .+|++.++.   |       ..|....  ..+.+ ++..+.|...+.  .+..
T Consensus       303 p~~~~~l~~~~~~~~~~~~~~~~~~dn~~~s~~~l~---~-------~~ad~~~~~~~y~e-~g~~~~le~~~~--~~~~  369 (485)
T COG3349         303 PVITLHLRFDGWVTELTDRNQQFGIDNLLWSDDTLG---G-------VVADLALTSPDYVE-PGAGCYLEKVLA--PGWP  369 (485)
T ss_pred             ceeEEEEeecCccccccccchhhhhhccccccccCC---c-------eeeeccccchhhcc-ccchhhhhhhhc--cccc
Confidence            999999999964332221  1010   113333321   1       1111100  01111 111122332222  2334


Q ss_pred             HhcCCHHHHHHHHHHHHHHHhCCCCCCCCCcEEEeecCCCCCCCccccCCCCCccccccccCcccccCCCCCCCCCcccc
Q psy10795        232 METLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRS  311 (412)
Q Consensus       232 ~~~lsdeel~~~~l~~L~~~~g~~~~~~~~~~~~~~~W~~dp~~~G~ys~~~pg~~~~~~~~~~~~~~~~~~~~p~~~~~  311 (412)
                      +...+++++.....+.+..++|...+  ......+.+  +   -++.| ...||-.                        
T Consensus       370 ~~~~~~~~~~a~~e~~~~~~vP~~~~--a~~~~~~i~--~---~q~~~-~~~pgs~------------------------  417 (485)
T COG3349         370 FLFESDEAIVATFEKELYELVPSLAE--AKLKSSVLV--N---QQSLY-GLAPGSY------------------------  417 (485)
T ss_pred             ccccchhhHHHHHHHHhhhcCCchhc--cccccccee--c---ccccc-ccCCCcc------------------------
Confidence            56678899999999999988874211  111111110  0   01111 1122210                        


Q ss_pred             ccCCCccCCCCccCcchHHhccccccCCCCceEEEecccccCcCcccchhhhhccHHHHHHHHHHHHhc
Q psy10795        312 YQPTSLRNGSDRLNTSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVYLRRE  380 (412)
Q Consensus       312 ~~~~g~~~~~~~~~~~~~~l~~p~~~~~~~~~l~fAGe~t~~~~~g~~eGA~~SG~raA~~i~~~l~~~  380 (412)
                                    .+++....|+.      |+++|||++-..+.++||||..||++||+.|++.+...
T Consensus       418 --------------~~rP~~~Tpv~------N~~laGd~~~~~~~~smE~A~~sGl~AA~~v~~~~~~~  466 (485)
T COG3349         418 --------------HYRPEQKTPIP------NLLLAGDYTKQPYLGSMEGATLSGLLAANAILDNLGHH  466 (485)
T ss_pred             --------------ccCCCCCCCcc------chhhccceeecCCcCccchhhhhHHHHHHHHHHhhhhc
Confidence                          12333455654      89999999999899999999999999999999887643

>PLN02568 polyamine oxidase

Probab=97.13  E-value=0.0005  Score=71.87  Aligned_cols=41  Identities=17%  Similarity=0.292  Sum_probs=34.0

Q ss_pred             hHHHHhhcCCccccceEEEEcCCCCccC-----CCcceEeeeccCC
Q psy10795          5 ALGTLLQGLNFGTVDKIFIRFPAKWWKD-----GCQGFNLYWTQQD   45 (412)
Q Consensus         5 ~~~~ai~~lgfgt~~Kifl~f~~~~w~~-----~~~~~~~~W~~~d   45 (412)
                      .|.+||++|+||+++||||+|.+|||..     .+..+.++|...+
T Consensus       315 ~k~~Ai~~l~~g~~~Ki~l~f~~~fW~~~~~~~~~~~~~~~~~~~~  360 (539)
T PLN02568        315 FKTDAISRLGFGVVNKLFVELSPRPDGSPEDVAKFPFLQMAFHRSD  360 (539)
T ss_pred             HHHHHHHhcCCceeeEEEEEecCCCCCcccccccccceeeeecccc
Confidence            5789999999999999999999999964     3455677777544

>COG2907 Predicted NAD/FAD-binding protein [General function prediction only]

Probab=97.00  E-value=0.0015  Score=62.96  Aligned_cols=81  Identities=10%  Similarity=0.141  Sum_probs=66.2

Q ss_pred             cCCcCCCCCCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChhhhhcCcccccCCCcHHHHHHHhcCCCcce
Q psy10795         81 SGQTPVDLSNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNAIEGLNFGTV  160 (412)
Q Consensus        81 ~~~~~~~~~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~~L~~~~i~f~P~Lp~~k~~ai~~l~~g~~  160 (412)
                      .++.++  .++|.++++|.+|.+ -.++|.|+..+|++-.+|+||+++-+.+...+   ++.+-|++ ++++.++.|...
T Consensus       225 ~laa~~--~~~i~t~~~V~~l~r-lPdGv~l~~~~G~s~rFD~vViAth~dqAl~m---L~e~sp~e-~qll~a~~Ys~n  297 (447)
T COG2907         225 RLAADI--RGRIETRTPVCRLRR-LPDGVVLVNADGESRRFDAVVIATHPDQALAL---LDEPSPEE-RQLLGALRYSAN  297 (447)
T ss_pred             HHhccc--cceeecCCceeeeee-CCCceEEecCCCCccccceeeeecChHHHHHh---cCCCCHHH-HHHHHhhhhhhc
Confidence            445566  678999999999999 89999999999999999999999999988873   33334554 559999999988


Q ss_pred             eEEEEEcC
Q psy10795        161 DKIFIRFP  168 (412)
Q Consensus       161 ~KV~l~f~  168 (412)
                      ..|.....
T Consensus       298 ~aVlhtd~  305 (447)
T COG2907         298 TAVLHTDA  305 (447)
T ss_pred             eeEEeecc
Confidence            88777655

>PRK10015 oxidoreductase; Provisional

Probab=96.21  E-value=0.52  Score=47.99  Aligned_cols=39  Identities=15%  Similarity=0.158  Sum_probs=32.1

Q ss_pred             eEEEecccccCcCc-----ccchhhhhccHHHHHHHHHHHHhcc
Q psy10795        343 VLLFAGEATSPHHY-----GTVNGAVESGARETANAIVYLRREG  381 (412)
Q Consensus       343 ~l~fAGe~t~~~~~-----g~~eGA~~SG~raA~~i~~~l~~~~  381 (412)
                      ++.++||+-....+     .-|.-|+.||..||+.|++.+....
T Consensus       296 g~llvGDAAg~v~p~~~~g~Gi~~A~~SG~~AAe~i~~a~~~~d  339 (429)
T PRK10015        296 GVMIVGDAAGFCLNLGFTVRGMDLAIASAQAAATTVIAAKERAD  339 (429)
T ss_pred             CeEEEecccccccccCccccchhHHHHHHHHHHHHHHHHHhcCC
Confidence            89999999876432     3577799999999999999988644

>PRK10157 putative oxidoreductase FixC; Provisional

Probab=96.02  E-value=0.17  Score=51.55  Aligned_cols=42  Identities=14%  Similarity=0.173  Sum_probs=33.6

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLG  131 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~  131 (412)
                      +.+|+.+++|++|.. .++.+.+.+.+|.++.||.||.|.=..
T Consensus       122 Gv~i~~~~~V~~i~~-~~g~v~~v~~~g~~i~A~~VI~A~G~~  163 (428)
T PRK10157        122 GAQLITGIRVDNLVQ-RDGKVVGVEADGDVIEAKTVILADGVN  163 (428)
T ss_pred             CCEEECCCEEEEEEE-eCCEEEEEEcCCcEEECCEEEEEeCCC
Confidence            678999999999987 666665445567789999999998543

>PLN02976 amine oxidase

Probab=95.83  E-value=0.0065  Score=68.85  Aligned_cols=41  Identities=27%  Similarity=0.537  Sum_probs=35.7

Q ss_pred             hHHHHhhcCCccccceEEEEcCCCCccCCCcceEeeeccCC
Q psy10795          5 ALGTLLQGLNFGTVDKIFIRFPAKWWKDGCQGFNLYWTQQD   45 (412)
Q Consensus         5 ~~~~ai~~lgfgt~~Kifl~f~~~~w~~~~~~~~~~W~~~d   45 (412)
                      .|..||++|+||+++||||+|.++||+.+...|...|++.+
T Consensus      1012 ~KqaAIqrLgfG~lnKV~LeFdrpFW~~d~d~FG~s~edtd 1052 (1713)
T PLN02976       1012 WKYSSIQRLGFGVLNKVVLEFPEVFWDDSVDYFGATAEETD 1052 (1713)
T ss_pred             HHHHHHHhhccccceEEEEEeCCccccCCCCccccccccCC
Confidence            57899999999999999999999999987777777776543

>TIGR01984 UbiH 2-polyprenyl-6-methoxyphenol 4-hydroxylase

Probab=95.69  E-value=1.1  Score=44.38  Aligned_cols=43  Identities=14%  Similarity=0.076  Sum_probs=38.1

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChhh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGV  132 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~~  132 (412)
                      +.+++++++|++|.. ++++|+|++.+|+++.||.||.|-....
T Consensus       120 gv~~~~~~~v~~i~~-~~~~~~v~~~~g~~~~ad~vV~AdG~~S  162 (382)
T TIGR01984       120 NIQLYCPARYKEIIR-NQDYVRVTLDNGQQLRAKLLIAADGANS  162 (382)
T ss_pred             CcEEEcCCeEEEEEE-cCCeEEEEECCCCEEEeeEEEEecCCCh
Confidence            557999999999998 7888999998898999999999998753

This model represents the FAD-dependent monoxygenase responsible for the second hydroxylation step in the aerobic ubiquinone bioynthetic pathway. The scope of this model is limited to the proteobacteria. This family is closely related to the UbiF hydroxylase which catalyzes the final hydroxylation step. The enzyme has also been named VisB due to a mutant VISible light sensitive phenotype.

>PF13738 Pyr_redox_3: Pyridine nucleotide-disulphide oxidoreductase; PDB: 3D1C_A 4A9W_B 2YLX_A 2YM2_A 2YLW_A 2YLR_A 2YM1_A 2YLS_A 1W4X_A 2YLT_A

Probab=95.26  E-value=0.029  Score=50.40  Aligned_cols=41  Identities=17%  Similarity=0.304  Sum_probs=31.4

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCCh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPL  130 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~  130 (412)
                      +.+|++++.|++|++ .+++|.|++.+|++++||+||+|+-.
T Consensus        96 ~l~i~~~~~V~~v~~-~~~~w~v~~~~~~~~~a~~VVlAtG~  136 (203)
T PF13738_consen   96 GLEIRFNTRVESVRR-DGDGWTVTTRDGRTIRADRVVLATGH  136 (203)
T ss_dssp             TGGEETS--EEEEEE-ETTTEEEEETTS-EEEEEEEEE---S
T ss_pred             CcccccCCEEEEEEE-eccEEEEEEEecceeeeeeEEEeeec
Confidence            345999999999999 78889999999989999999999874

...

>PLN03000 amine oxidase

Probab=94.96  E-value=0.026  Score=61.64  Aligned_cols=40  Identities=20%  Similarity=0.412  Sum_probs=35.8

Q ss_pred             hHHHHhhcCCccccceEEEEcCCCCccCCCcceEeeeccC
Q psy10795          5 ALGTLLQGLNFGTVDKIFIRFPAKWWKDGCQGFNLYWTQQ   44 (412)
Q Consensus         5 ~~~~ai~~lgfgt~~Kifl~f~~~~w~~~~~~~~~~W~~~   44 (412)
                      .|.+||++++||.++||++.|+++||..+...|..+|.+.
T Consensus       446 ~K~~AI~rL~~G~l~KViL~Fd~~FW~~d~~~FG~l~~~~  485 (881)
T PLN03000        446 RKLDCIKRLGFGLLNKVAMLFPYVFWSTDLDTFGHLTEDP  485 (881)
T ss_pred             HHHHHHHcCCCcceEEEEEEeCCccccCCCCceeEEecCC
Confidence            6899999999999999999999999988877788887654

>TIGR01988 Ubi-OHases Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family

Probab=94.93  E-value=1.4  Score=43.62  Aligned_cols=41  Identities=12%  Similarity=0.105  Sum_probs=36.1

Q ss_pred             CcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChh
Q psy10795         90 NKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLG  131 (412)
Q Consensus        90 ~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~  131 (412)
                      .+|+++++|++|.. .+++|.|++.+|+++.+|.||.|--..
T Consensus       122 ~~v~~~~~v~~i~~-~~~~~~v~~~~g~~~~~~~vi~adG~~  162 (385)
T TIGR01988       122 VTLLCPARVVELPR-HSDHVELTLDDGQQLRARLLVGADGAN  162 (385)
T ss_pred             cEEecCCeEEEEEe-cCCeeEEEECCCCEEEeeEEEEeCCCC
Confidence            57999999999998 788899999999899999999886654

This model represents a family of FAD-dependent hydroxylases (monooxygenases) which are all believed to act in the aerobic ubiquinone biosynthesis pathway. A separate set of hydroxylases, as yet undiscovered, are believed to be active under anaerobic conditions. In E. coli three enzyme activities have been described, UbiB (which acts first at position 6, see TIGR01982), UbiH (which acts at position 4, ) and UbiF (which acts at position 5). UbiH and UbiF are similar to one another and form the basis of this subfamily. Interestingly, E. coli contains another hydroxylase gene, called visC, that is highly similar to UbiF, adjacent to UbiH and, when mutated, results in a phenotype similar to that of UbiH (which has also been named visB). Several other species appear to have three homologs in this family, although they assort themselves differently on phylogenetic trees (e.g. Xylella and Mesorhizobium) maki

>PRK07364 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated

Probab=94.72  E-value=3.5  Score=41.40  Aligned_cols=42  Identities=17%  Similarity=0.186  Sum_probs=33.3

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCC-C--cEEEeCEEEEeCChh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSD-G--SVYTAYKIIITVPLG  131 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~-G--~~~~ad~VIvTvP~~  131 (412)
                      +.+|+++++|++|.. +++++.|++.+ +  .+++||.||.|-=..
T Consensus       136 ~v~i~~~~~v~~v~~-~~~~~~v~~~~~~~~~~i~adlvIgADG~~  180 (415)
T PRK07364        136 NITWLCPAEVVSVEY-QQDAATVTLEIEGKQQTLQSKLVVAADGAR  180 (415)
T ss_pred             CcEEEcCCeeEEEEe-cCCeeEEEEccCCcceEEeeeEEEEeCCCC
Confidence            457899999999998 77888888753 2  368999999886543

>PRK07494 2-octaprenyl-6-methoxyphenyl hydroxylase; Provisional

Probab=94.66  E-value=1.1  Score=44.63  Aligned_cols=40  Identities=13%  Similarity=0.147  Sum_probs=35.0

Q ss_pred             cEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChh
Q psy10795         91 KILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLG  131 (412)
Q Consensus        91 ~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~  131 (412)
                      .+++++.|++|.. .+++|.|++.+|++++||.||.|--..
T Consensus       127 ~~~~~~~v~~i~~-~~~~~~v~~~~g~~~~a~~vI~AdG~~  166 (388)
T PRK07494        127 ITRFGDEAESVRP-REDEVTVTLADGTTLSARLVVGADGRN  166 (388)
T ss_pred             cEEECCeeEEEEE-cCCeEEEEECCCCEEEEeEEEEecCCC
Confidence            3588999999998 888899999999899999999987654

>PLN02676 polyamine oxidase

Probab=94.13  E-value=0.052  Score=56.26  Aligned_cols=29  Identities=28%  Similarity=0.614  Sum_probs=26.7

Q ss_pred             hHHHHhhcCCccccceEEEEcCCCCccCC
Q psy10795          5 ALGTLLQGLNFGTVDKIFIRFPAKWWKDG   33 (412)
Q Consensus         5 ~~~~ai~~lgfgt~~Kifl~f~~~~w~~~   33 (412)
                      .|.++|+++++|.++|||++|++|||..+
T Consensus       301 ~k~~ai~~l~~g~~~Kv~l~f~~~FW~~~  329 (487)
T PLN02676        301 WKIEAIYQFDMAVYTKIFLKFPYKFWPSG  329 (487)
T ss_pred             HHHHHHHhCCceeeEEEEEEeCCCCCCCC
Confidence            57899999999999999999999999663

>PLN02529 lysine-specific histone demethylase 1

Probab=93.52  E-value=0.078  Score=57.37  Aligned_cols=39  Identities=21%  Similarity=0.458  Sum_probs=33.7

Q ss_pred             hHHHHhhcCCccccceEEEEcCCCCccCCCcceEeeecc
Q psy10795          5 ALGTLLQGLNFGTVDKIFIRFPAKWWKDGCQGFNLYWTQ   43 (412)
Q Consensus         5 ~~~~ai~~lgfgt~~Kifl~f~~~~w~~~~~~~~~~W~~   43 (412)
                      .|..||++++||.++|++|.|+++||..+...+.++|..
T Consensus       422 ~K~~AI~rL~yG~v~KV~L~F~~~FW~~~~~~fG~l~~~  460 (738)
T PLN02529        422 RKLAAIDRLGFGLLNKVAMVFPSVFWGEELDTFGCLNES  460 (738)
T ss_pred             HHHHHHHcCCCceeEEEEEEeCCccccCCCCceEEEecc
Confidence            589999999999999999999999998766666667653

>PRK08020 ubiF 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed

Probab=93.39  E-value=7.7  Score=38.58  Aligned_cols=43  Identities=12%  Similarity=0.099  Sum_probs=37.0

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChhh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGV  132 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~~  132 (412)
                      +.+|+.+++|++|.. .++++.|++.+|++++||.||.|--...
T Consensus       127 gv~i~~~~~v~~i~~-~~~~~~v~~~~g~~~~a~~vI~AdG~~S  169 (391)
T PRK08020        127 NVTLRCPASLQALQR-DDDGWELTLADGEEIQAKLVIGADGANS  169 (391)
T ss_pred             CcEEEcCCeeEEEEE-cCCeEEEEECCCCEEEeCEEEEeCCCCc
Confidence            457899999999998 7778999998998999999999977643

>PLN02328 lysine-specific histone demethylase 1 homolog

Probab=93.38  E-value=0.088  Score=57.41  Aligned_cols=38  Identities=21%  Similarity=0.463  Sum_probs=33.9

Q ss_pred             hHHHHhhcCCccccceEEEEcCCCCccCCCcceEeeec
Q psy10795          5 ALGTLLQGLNFGTVDKIFIRFPAKWWKDGCQGFNLYWT   42 (412)
Q Consensus         5 ~~~~ai~~lgfgt~~Kifl~f~~~~w~~~~~~~~~~W~   42 (412)
                      .|.+||++++||.++|++|.|.++||..+...|.+++.
T Consensus       502 ~K~~AI~~l~yG~~~KV~L~F~~~FW~~~~d~fG~l~~  539 (808)
T PLN02328        502 RKKDAIQRLGYGLLNKVALLFPYNFWGGEIDTFGHLTE  539 (808)
T ss_pred             HHHHHHHcCCCcceEEEEEEeCCccccCCCCceEEEee
Confidence            68999999999999999999999999877667777765

>PRK08849 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional

Probab=93.30  E-value=9.5  Score=37.96  Aligned_cols=43  Identities=12%  Similarity=0.183  Sum_probs=37.9

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChhh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGV  132 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~~  132 (412)
                      +.+|+.++.|++|+. ++++++|++.+|++++||.||.|--...
T Consensus       125 ~i~i~~~~~v~~~~~-~~~~~~v~~~~g~~~~~~lvIgADG~~S  167 (384)
T PRK08849        125 NLTLMCPEKLADLEF-SAEGNRVTLESGAEIEAKWVIGADGANS  167 (384)
T ss_pred             CeEEECCCceeEEEE-cCCeEEEEECCCCEEEeeEEEEecCCCc
Confidence            457999999999998 7888999999999999999999976643

>KOG0029|consensus

Probab=93.09  E-value=0.083  Score=54.72  Aligned_cols=28  Identities=29%  Similarity=0.663  Sum_probs=26.3

Q ss_pred             hhHHHHhhcCCccccceEEEEcCCCCcc
Q psy10795          4 IALGTLLQGLNFGTVDKIFIRFPAKWWK   31 (412)
Q Consensus         4 ~~~~~ai~~lgfgt~~Kifl~f~~~~w~   31 (412)
                      ..|.+||++||||.++||.++|++.||+
T Consensus       285 ~~k~~aI~~lg~g~~~Kv~l~F~~~fW~  312 (501)
T KOG0029|consen  285 RWKQEAIDRLGFGLVNKVILEFPRVFWD  312 (501)
T ss_pred             HHHHHHHHhcCCCceeEEEEEeccccCC
Confidence            4689999999999999999999999995

>KOG4254|consensus

Probab=92.74  E-value=5.3  Score=40.47  Aligned_cols=65  Identities=18%  Similarity=0.213  Sum_probs=46.1

Q ss_pred             CCCcEEcCCeEEEEEecCCCc-EEEEeCCCcEEEeCEEEE-eCChhhhhcCcccccCCCcHHHHHHHhcCCC
Q psy10795         88 LSNKILYKKEVNKIDWEYQNG-AAVSCSDGSVYTAYKIII-TVPLGVLKSKLITFVPSLPAQKLNAIEGLNF  157 (412)
Q Consensus        88 ~~~~I~ln~~V~~I~~~~~~~-V~V~~~~G~~~~ad~VIv-TvP~~~L~~~~i~f~P~Lp~~k~~ai~~l~~  157 (412)
                      .|++|.++..|.+|.- +++. +-|...||+.+.+..||+ |+|...+.++  .=.-.||++.  .|+++.+
T Consensus       277 ~GaeI~tka~Vq~Ill-d~gka~GV~L~dG~ev~sk~VvSNAt~~~Tf~kL--lp~e~LPeef--~i~q~d~  343 (561)
T KOG4254|consen  277 AGAEIFTKATVQSILL-DSGKAVGVRLADGTEVRSKIVVSNATPWDTFEKL--LPGEALPEEF--VIQQLDT  343 (561)
T ss_pred             ccceeeehhhhhheec-cCCeEEEEEecCCcEEEeeeeecCCchHHHHHHh--CCCccCCchh--hhhhccc
Confidence            4889999999999998 5554 468899999999988887 4555555552  1122577764  5666643

>PF13454 NAD_binding_9: FAD-NAD(P)-binding

Probab=92.38  E-value=0.28  Score=42.51  Aligned_cols=36  Identities=22%  Similarity=0.285  Sum_probs=32.0

Q ss_pred             EcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCC
Q psy10795         93 LYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVP  129 (412)
Q Consensus        93 ~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP  129 (412)
                      +...+|+.|.. .++++.|.+.+|..+.||+||+|+-
T Consensus       119 ~~~~~V~~i~~-~~~~~~v~~~~g~~~~~d~VvLa~G  154 (156)
T PF13454_consen  119 HVRAEVVDIRR-DDDGYRVVTADGQSIRADAVVLATG  154 (156)
T ss_pred             EEeeEEEEEEE-cCCcEEEEECCCCEEEeCEEEECCC
Confidence            35779999999 8888999999999999999999974

>COG2081 Predicted flavoproteins [General function prediction only]

Probab=92.25  E-value=0.26  Score=48.88  Aligned_cols=40  Identities=15%  Similarity=0.231  Sum_probs=37.1

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCC
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVP  129 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP  129 (412)
                      +.+|+++++|.+|.+ ++++..|++.+|+++.||.+|+|+-
T Consensus       125 gV~i~~~~~v~~v~~-~~~~f~l~t~~g~~i~~d~lilAtG  164 (408)
T COG2081         125 GVTIRTRSRVSSVEK-DDSGFRLDTSSGETVKCDSLILATG  164 (408)
T ss_pred             CcEEEecceEEeEEe-cCceEEEEcCCCCEEEccEEEEecC
Confidence            778999999999999 7788999999999999999999975

>PF01266 DAO: FAD dependent oxidoreductase; InterPro: IPR006076 This entry includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase (1

Probab=91.86  E-value=0.19  Score=48.81  Aligned_cols=42  Identities=24%  Similarity=0.224  Sum_probs=35.0

Q ss_pred             CCcEEcCCeEEEEEecCCCcEE-EEeCCCcEEEeCEEEEeCChhh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAA-VSCSDGSVYTAYKIIITVPLGV  132 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~-V~~~~G~~~~ad~VIvTvP~~~  132 (412)
                      |.+|+.+++|++|.. ++++|+ |.+.+|+ +.||+||+|.-+..
T Consensus       161 Gv~i~~~~~V~~i~~-~~~~v~gv~~~~g~-i~ad~vV~a~G~~s  203 (358)
T PF01266_consen  161 GVEIRTGTEVTSIDV-DGGRVTGVRTSDGE-IRADRVVLAAGAWS  203 (358)
T ss_dssp             T-EEEESEEEEEEEE-ETTEEEEEEETTEE-EEECEEEE--GGGH
T ss_pred             hhhccccccccchhh-cccccccccccccc-cccceeEecccccc
Confidence            678999999999999 888898 9999996 99999999986643

1.99.5 from EC), Sarcosine oxidase beta subunit (1.5.3.1 from EC), D-alanine oxidase (1.4.99.1 from EC), D-aspartate oxidase (1.4.3.1 from EC). D-amino acid oxidase (1.4.3.3 from EC) (DAMOX or DAO) is an FAD flavoenzyme that catalyzes the oxidation of neutral and basic D-amino acids into their corresponding keto acids. DAOs have been characterised and sequenced in fungi and vertebrates where they are known to be located in the peroxisomes. D-aspartate oxidase (1.4.3.1 from EC) (DASOX) [] is an enzyme, structurally related to DAO, which catalyzes the same reaction but is active only toward dicarboxylic D-amino acids. In DAO, a conserved histidine has been shown [] to be important for the enzyme's catalytic activity.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2RGO_A 3NYE_A 3NYF_A 3NYC_A 3SM8_A 3SGL_A 3PVC_A 3DME_A 2GAH_B 3NLC_A ....

>TIGR03197 MnmC_Cterm tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain

Probab=91.43  E-value=0.36  Score=48.12  Aligned_cols=43  Identities=12%  Similarity=0.213  Sum_probs=37.6

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChhh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGV  132 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~~  132 (412)
                      +.+|+.+++|++|+. ++++|.|++.+|.++.||+||+|.-...
T Consensus       148 G~~i~~~~~V~~i~~-~~~~~~v~t~~g~~~~a~~vV~a~G~~~  190 (381)
T TIGR03197       148 RLTLHFNTEITSLER-DGEGWQLLDANGEVIAASVVVLANGAQA  190 (381)
T ss_pred             CcEEEeCCEEEEEEE-cCCeEEEEeCCCCEEEcCEEEEcCCccc
Confidence            568999999999998 7778999999997799999999977654

In Escherichia coli, the protein previously designated YfcK is now identified as the bifunctional enzyme MnmC. It acts, following the action of the heterotetramer of GidA and MnmE, in the modification of U-34 of certain tRNA to 5-methylaminomethyl-2-thiouridine (mnm5s2U). In other bacterial, the corresponding proteins are usually but always found as a single polypeptide chain, but occasionally as the product of tandem genes. This model represents the C-terminal region of the multifunctional protein.

>COG0579 Predicted dehydrogenase [General function prediction only]

Probab=90.95  E-value=0.45  Score=48.16  Aligned_cols=46  Identities=20%  Similarity=0.146  Sum_probs=38.5

Q ss_pred             CCCcEEcCCeEEEEEecCCCc-EEEEeCCCcE-EEeCEEEEeCChhhhh
Q psy10795         88 LSNKILYKKEVNKIDWEYQNG-AAVSCSDGSV-YTAYKIIITVPLGVLK  134 (412)
Q Consensus        88 ~~~~I~ln~~V~~I~~~~~~~-V~V~~~~G~~-~~ad~VIvTvP~~~L~  134 (412)
                      .+..|+||++|+.|++ .+++ ..+.+.+|++ ++|+.||.+..+..+.
T Consensus       166 ~g~~i~ln~eV~~i~~-~~dg~~~~~~~~g~~~~~ak~Vin~AGl~Ad~  213 (429)
T COG0579         166 NGVELRLNTEVTGIEK-QSDGVFVLNTSNGEETLEAKFVINAAGLYADP  213 (429)
T ss_pred             cCCEEEecCeeeEEEE-eCCceEEEEecCCcEEEEeeEEEECCchhHHH
Confidence            3789999999999999 6664 5677888866 9999999999987654

>PTZ00363 rab-GDP dissociation inhibitor; Provisional

Probab=90.40  E-value=0.55  Score=48.00  Aligned_cols=63  Identities=16%  Similarity=0.288  Sum_probs=45.6

Q ss_pred             CCcEEcCCeEEEEEecCCCc--EEEEeCCCcEEEeCEEEEeCChhhhhcCcccccCCCcHHHHHHHhcCCCcceeEEEEE
Q psy10795         89 SNKILYKKEVNKIDWEYQNG--AAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNAIEGLNFGTVDKIFIR  166 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~--V~V~~~~G~~~~ad~VIvTvP~~~L~~~~i~f~P~Lp~~k~~ai~~l~~g~~~KV~l~  166 (412)
                      |+.++|+++|++|.. ++++  +.|++.+|+++.|++||+..+.          .|.   . .   +  ..+.+...++-
T Consensus       246 Gg~~~L~~~V~~I~~-~~~g~~~~V~~~~Ge~i~a~~VV~~~s~----------~p~---~-~---~--~~~~v~R~i~i  305 (443)
T PTZ00363        246 GGTYMLNTPVDEVVF-DENGKVCGVKSEGGEVAKCKLVICDPSY----------FPD---K-V---K--KVGKVIRCICI  305 (443)
T ss_pred             CcEEEcCCeEEEEEE-cCCCeEEEEEECCCcEEECCEEEECccc----------ccc---c-c---c--cccEEEEEEEE
Confidence            789999999999998 5433  5788999999999999984332          121   1 1   1  35667777777


Q ss_pred             cCCCc
Q psy10795        167 FPAKW  171 (412)
Q Consensus       167 f~~~f  171 (412)
                      .++|.
T Consensus       306 ~~~pi  310 (443)
T PTZ00363        306 LNHPI  310 (443)
T ss_pred             Ecccc
Confidence            77765

>PF03486 HI0933_like: HI0933-like protein; InterPro: IPR004792 This is a family of conserved hypothetical proteins that may include proteins with a dinucleotide-binding motif (Rossman fold), including oxidoreductases and dehydrogenases

Probab=88.98  E-value=0.64  Score=47.03  Aligned_cols=40  Identities=23%  Similarity=0.403  Sum_probs=29.1

Q ss_pred             CCcEEcCCeEEEEEecCCCc-EEEEeCCCcEEEeCEEEEeCC
Q psy10795         89 SNKILYKKEVNKIDWEYQNG-AAVSCSDGSVYTAYKIIITVP  129 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~-V~V~~~~G~~~~ad~VIvTvP  129 (412)
                      +.+|+++++|.+|.. .+++ +.|.+.++.++.||+||+|+=
T Consensus       123 gv~i~~~~~V~~i~~-~~~~~f~v~~~~~~~~~a~~vILAtG  163 (409)
T PF03486_consen  123 GVEIHFNTRVKSIEK-KEDGVFGVKTKNGGEYEADAVILATG  163 (409)
T ss_dssp             T-EEE-S--EEEEEE-ETTEEEEEEETTTEEEEESEEEE---
T ss_pred             CCEEEeCCEeeeeee-cCCceeEeeccCcccccCCEEEEecC
Confidence            678999999999998 6666 789887777999999999965

; PDB: 2I0Z_A 3V76_A 2GQF_A.

>PRK07236 hypothetical protein; Provisional

Probab=88.44  E-value=0.91  Score=45.32  Aligned_cols=41  Identities=10%  Similarity=-0.002  Sum_probs=36.0

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCCh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPL  130 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~  130 (412)
                      ..+|++++.|++|+. ++++|+|++.+|++++||.||.|==.
T Consensus       112 ~~~i~~~~~v~~i~~-~~~~v~v~~~~g~~~~ad~vIgADG~  152 (386)
T PRK07236        112 AERYHLGETLVGFEQ-DGDRVTARFADGRRETADLLVGADGG  152 (386)
T ss_pred             CcEEEcCCEEEEEEe-cCCeEEEEECCCCEEEeCEEEECCCC
Confidence            356999999999998 78889999999999999999999443

>PRK07588 hypothetical protein; Provisional

Probab=88.44  E-value=0.84  Score=45.60  Aligned_cols=44  Identities=16%  Similarity=0.171  Sum_probs=38.2

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChhhh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVL  133 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~~L  133 (412)
                      +.+|++++.|++|+. ++++|+|++++|+++++|.||.|--....
T Consensus       116 ~v~i~~~~~v~~i~~-~~~~v~v~~~~g~~~~~d~vIgADG~~S~  159 (391)
T PRK07588        116 QVETIFDDSIATIDE-HRDGVRVTFERGTPRDFDLVIGADGLHSH  159 (391)
T ss_pred             CeEEEeCCEEeEEEE-CCCeEEEEECCCCEEEeCEEEECCCCCcc
Confidence            457999999999998 78889999999999999999998775433

>PF05834 Lycopene_cycl: Lycopene cyclase protein; InterPro: IPR008671 This family consists of lycopene beta and epsilon cyclase proteins

Probab=88.23  E-value=29  Score=34.49  Aligned_cols=42  Identities=19%  Similarity=0.173  Sum_probs=37.2

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLG  131 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~  131 (412)
                      ++.+++++.|++|+. .++.+.|++.+|++++|+.||-|.++.
T Consensus       100 ~~~~~~~~~V~~i~~-~~~~~~v~~~~g~~i~a~~VvDa~g~~  141 (374)
T PF05834_consen  100 GGVIRLNARVTSIEE-TGDGVLVVLADGRTIRARVVVDARGPS  141 (374)
T ss_pred             CCeEEEccEEEEEEe-cCceEEEEECCCCEEEeeEEEECCCcc
Confidence            456899999999998 777889999999999999999998854

Carotenoids with cyclic end groups are essential components of the photosynthetic membranes in all plants, algae, and cyanobacteria. These lipid-soluble compounds protect against photo-oxidation, harvest light for photosynthesis, and dissipate excess light energy absorbed by the antenna pigments. The cyclisation of lycopene (psi, psi-carotene) is a key branch point in the pathway of carotenoid biosynthesis. Two types of cyclic end groups are found in higher plant carotenoids: the beta and epsilon rings. Carotenoids with two beta rings are ubiquitous, and those with one beta and one epsilon ring are common; however, carotenoids with two epsilon rings are rare [].; GO: 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0016117 carotenoid biosynthetic process

>TIGR00031 UDP-GALP_mutase UDP-galactopyranose mutase

Probab=88.23  E-value=0.15  Score=50.99  Aligned_cols=111  Identities=11%  Similarity=-0.024  Sum_probs=67.9

Q ss_pred             hhcCCccccceEEEEcCCCCccCCCcceEeeeccCCcc-cccccccccCCCCceeeeeeeEeccCCcceeeecCCcCCCC
Q psy10795         10 LQGLNFGTVDKIFIRFPAKWWKDGCQGFNLYWTQQDKT-DLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLVSGQTPVDL   88 (412)
Q Consensus        10 i~~lgfgt~~Kifl~f~~~~w~~~~~~~~~~W~~~d~~-~l~~~~~~~~~~~W~~~i~gf~~v~~~p~vl~~~~~~~~~~   88 (412)
                      |..+|=.--.++|..|++|-|+.++..|...|.. +.. .+.     .+..-+ .+..-.++..++ ..+.+.+...-  
T Consensus       139 ~~~~G~~lye~ff~~Yt~K~Wg~~p~el~~~~~~-RvP~~~~-----~d~~yf-~d~~q~~P~~Gy-t~~~~~ml~~~--  208 (377)
T TIGR00031       139 IQLLYQFLYQKVYKPYTVKQWGLPAEEIDPFVIG-RVPVVLS-----EDSSYF-PDRYQGLPKGGY-TKLFEKMLDHP--  208 (377)
T ss_pred             HHHHHHHHHHHhccccCceeeCCChHHCCHHHeE-ecceEec-----CCCCcc-cccccccccccH-HHHHHHHHhcC--
Confidence            6677777788999999999999999999999996 321 111     111111 111111222221 13555555431  


Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChhhhhc
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKS  135 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~~L~~  135 (412)
                      +-+|+||+.+..|+. .+++|.+..  + .+. +.||.|.|+..+-.
T Consensus       209 ~i~v~l~~~~~~~~~-~~~~~~~~~--~-~~~-~~vi~Tg~id~~f~  250 (377)
T TIGR00031       209 LIDVKLNCHINLLKD-KDSQLHFAN--K-AIR-KPVIYTGLIDQLFG  250 (377)
T ss_pred             CCEEEeCCccceeec-cccceeecc--c-ccc-CcEEEecCchHHHh
Confidence            346999998888876 455454433  2 232 78999999876543

The gene is known as glf, ceoA, and rfbD. It is known experimentally in E. coli, Mycobacterium tuberculosis, and Klebsiella pneumoniae.

>TIGR03219 salicylate_mono salicylate 1-monooxygenase

Probab=88.10  E-value=0.95  Score=45.64  Aligned_cols=43  Identities=16%  Similarity=0.165  Sum_probs=37.3

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChhh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGV  132 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~~  132 (412)
                      ...|+++++|++|+. ++++|+|++.+|++++||.||.|-=...
T Consensus       117 ~~~v~~~~~v~~i~~-~~~~~~v~~~~g~~~~ad~vVgADG~~S  159 (414)
T TIGR03219       117 EGIASFGKRATQIEE-QAEEVQVLFTDGTEYRCDLLIGADGIKS  159 (414)
T ss_pred             CceEEcCCEEEEEEe-cCCcEEEEEcCCCEEEeeEEEECCCccH
Confidence            345899999999998 7888999999999999999999976554

Members of this protein family are salicylate 1-monooxygenase, also called salicylate hydroxylase. This enzyme converts salicylate to catechol, which is a common intermediate in the degradation of a number of aromatic compounds (phenol, toluene, benzoate, etc.). The gene for this protein may occur in catechol degradation genes, such as those of the meta-cleavage pathway.

>PRK06847 hypothetical protein; Provisional

Probab=87.53  E-value=1.1  Score=44.36  Aligned_cols=42  Identities=19%  Similarity=0.169  Sum_probs=37.5

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLG  131 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~  131 (412)
                      +.+|+++++|++|+. +++++.|++.+|+++.||.||+|.-..
T Consensus       121 gv~v~~~~~v~~i~~-~~~~~~v~~~~g~~~~ad~vI~AdG~~  162 (375)
T PRK06847        121 GADVRLGTTVTAIEQ-DDDGVTVTFSDGTTGRYDLVVGADGLY  162 (375)
T ss_pred             CCEEEeCCEEEEEEE-cCCEEEEEEcCCCEEEcCEEEECcCCC
Confidence            568999999999998 778899999999999999999998764

>PF07156 Prenylcys_lyase: Prenylcysteine lyase; InterPro: IPR010795 This entry represents a conserved region found in a group of prenylcysteine lyases (1

Probab=87.48  E-value=1.4  Score=43.86  Aligned_cols=42  Identities=19%  Similarity=0.302  Sum_probs=29.2

Q ss_pred             CCcEEcCCeEEEE-EecCCCc---EEEEeCC--Cc-EEEeCEEEEeCChhh
Q psy10795         89 SNKILYKKEVNKI-DWEYQNG---AAVSCSD--GS-VYTAYKIIITVPLGV  132 (412)
Q Consensus        89 ~~~I~ln~~V~~I-~~~~~~~---V~V~~~~--G~-~~~ad~VIvTvP~~~  132 (412)
                      +.+| +|++|++| .. .+++   ++|++.+  +. .-.+|.||+|+|+..
T Consensus       139 ~A~v-l~~~Vt~I~~~-~~~~~~~y~v~~~~~~~~~~~~yD~VVIAtPl~~  187 (368)
T PF07156_consen  139 GANV-LNTTVTSITRR-SSDGYSLYEVTYKSSSGTESDEYDIVVIATPLQQ  187 (368)
T ss_pred             cCcE-ecceeEEEEec-cCCCceeEEEEEecCCCCccccCCEEEECCCccc
Confidence            6789 99999999 44 3333   4565543  22 235799999999954

8.3.5 from EC) that are approximately 500 residues long. Prenylcysteine lyase is a FAD-dependent thioether oxidase that degrades a variety of prenylcysteines, producing free cysteine, an isoprenoid aldehyde and hydrogen peroxide as products of the reaction []. It has been noted that this enzyme has considerable homology with ClP55, a 55 kDa protein that is associated with chloride ion pumps [].; GO: 0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor, 0030328 prenylcysteine catabolic process, 0055114 oxidation-reduction process

>PRK09126 hypothetical protein; Provisional

Probab=86.79  E-value=1.3  Score=44.08  Aligned_cols=42  Identities=19%  Similarity=0.184  Sum_probs=37.5

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLG  131 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~  131 (412)
                      +.+|+.+++|++|+. .++.+.|++.+|++++||.||.|--..
T Consensus       125 g~~i~~~~~v~~~~~-~~~~~~v~~~~g~~~~a~~vI~AdG~~  166 (392)
T PRK09126        125 GIELLTGTRVTAVRT-DDDGAQVTLANGRRLTARLLVAADSRF  166 (392)
T ss_pred             CcEEEcCCeEEEEEE-cCCeEEEEEcCCCEEEeCEEEEeCCCC
Confidence            568999999999998 777889998899999999999998864

>COG0654 UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion]

Probab=86.67  E-value=36  Score=33.90  Aligned_cols=41  Identities=20%  Similarity=0.243  Sum_probs=36.0

Q ss_pred             CcEEcCCeEEEEEecCCCcEEEEeC-CCcEEEeCEEEEeCChh
Q psy10795         90 NKILYKKEVNKIDWEYQNGAAVSCS-DGSVYTAYKIIITVPLG  131 (412)
Q Consensus        90 ~~I~ln~~V~~I~~~~~~~V~V~~~-~G~~~~ad~VIvTvP~~  131 (412)
                      .+|+.++.|+.|+. +++.|.|+.. +|++++||.||-|=-..
T Consensus       120 v~~~~~~~v~~~~~-~~~~v~v~l~~dG~~~~a~llVgADG~~  161 (387)
T COG0654         120 VTLRFGAEVEAVEQ-DGDGVTVTLSFDGETLDADLLVGADGAN  161 (387)
T ss_pred             cEEEcCceEEEEEE-cCCceEEEEcCCCcEEecCEEEECCCCc
Confidence            47999999999999 8888988888 99999999999986544

>PRK05868 hypothetical protein; Validated

Probab=86.44  E-value=1.4  Score=43.87  Aligned_cols=42  Identities=12%  Similarity=0.078  Sum_probs=37.0

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLG  131 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~  131 (412)
                      +.+|++++.|++|+. ++++|+|++++|++++||.||-|==..
T Consensus       118 ~v~i~~~~~v~~i~~-~~~~v~v~~~dg~~~~adlvIgADG~~  159 (372)
T PRK05868        118 SVEYLFDDSISTLQD-DGDSVRVTFERAAAREFDLVIGADGLH  159 (372)
T ss_pred             CcEEEeCCEEEEEEe-cCCeEEEEECCCCeEEeCEEEECCCCC
Confidence            557999999999998 788899999999999999999886644

>PRK05714 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional

Probab=85.95  E-value=1.6  Score=43.74  Aligned_cols=43  Identities=9%  Similarity=0.084  Sum_probs=37.5

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChhh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGV  132 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~~  132 (412)
                      +.+|+.+++|++|+. ++++|.|++.+|++++||.||.|--...
T Consensus       126 gv~v~~~~~v~~i~~-~~~~v~v~~~~g~~~~a~~vVgAdG~~S  168 (405)
T PRK05714        126 DIGLLANARLEQMRR-SGDDWLLTLADGRQLRAPLVVAADGANS  168 (405)
T ss_pred             CCEEEcCCEEEEEEE-cCCeEEEEECCCCEEEeCEEEEecCCCc
Confidence            567999999999998 7888999999998999999999876543

>TIGR01377 soxA_mon sarcosine oxidase, monomeric form

Probab=85.91  E-value=1.6  Score=43.15  Aligned_cols=41  Identities=20%  Similarity=0.190  Sum_probs=35.4

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLG  131 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~  131 (412)
                      +.+++.+++|++|.. +++++.|++.+| ++.||+||+|.-..
T Consensus       159 g~~~~~~~~V~~i~~-~~~~~~v~~~~~-~i~a~~vV~aaG~~  199 (380)
T TIGR01377       159 GATVRDGTKVVEIEP-TELLVTVKTTKG-SYQANKLVVTAGAW  199 (380)
T ss_pred             CCEEECCCeEEEEEe-cCCeEEEEeCCC-EEEeCEEEEecCcc
Confidence            678999999999998 777888888777 79999999998753

Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate. The enzyme is known in monomeric and heterotetrameric (alpha,beta,gamma,delta) forms

>TIGR02352 thiamin_ThiO glycine oxidase ThiO

Probab=85.54  E-value=1.4  Score=42.54  Aligned_cols=42  Identities=17%  Similarity=0.209  Sum_probs=35.5

Q ss_pred             CCcEEcCCeEEEEEecCCCcE-EEEeCCCcEEEeCEEEEeCChhh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGA-AVSCSDGSVYTAYKIIITVPLGV  132 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V-~V~~~~G~~~~ad~VIvTvP~~~  132 (412)
                      +.+|+.+++|+.|.. .+++| .|.+.+| ++.||.||+|+-...
T Consensus       151 g~~~~~~~~v~~i~~-~~~~~~~v~~~~g-~~~a~~vV~a~G~~~  193 (337)
T TIGR02352       151 GVEIIEHTEVQHIEI-RGEKVTAIVTPSG-DVQADQVVLAAGAWA  193 (337)
T ss_pred             CCEEEccceEEEEEe-eCCEEEEEEcCCC-EEECCEEEEcCChhh
Confidence            678999999999998 67766 4777777 899999999988755

This family consists of the homotetrameric, FAD-dependent glycine oxidase ThiO, from species such as Bacillus subtilis that use glycine in thiamine biosynthesis. In general, members of this family will not be found in species such as E. coli that instead use tyrosine and the ThiH protein.

>PRK07333 2-octaprenyl-6-methoxyphenyl hydroxylase; Provisional

Probab=85.45  E-value=1.7  Score=43.43  Aligned_cols=41  Identities=22%  Similarity=0.235  Sum_probs=36.6

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCCh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPL  130 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~  130 (412)
                      +.+|+++++|++|.. +++.|.|++.+|.+++||.||.|.-.
T Consensus       125 gv~v~~~~~v~~i~~-~~~~v~v~~~~g~~~~ad~vI~AdG~  165 (403)
T PRK07333        125 GIDLREATSVTDFET-RDEGVTVTLSDGSVLEARLLVAADGA  165 (403)
T ss_pred             CCEEEcCCEEEEEEE-cCCEEEEEECCCCEEEeCEEEEcCCC
Confidence            568999999999998 78889999989989999999999754

>PRK06753 hypothetical protein; Provisional

Probab=85.26  E-value=1.7  Score=43.05  Aligned_cols=43  Identities=21%  Similarity=0.160  Sum_probs=37.3

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChhh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGV  132 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~~  132 (412)
                      ..+|+++++|++|+. ++++|+|++.+|+++.+|.||-|--...
T Consensus       110 ~~~i~~~~~v~~i~~-~~~~v~v~~~~g~~~~~~~vigadG~~S  152 (373)
T PRK06753        110 EDAIFTGKEVTKIEN-ETDKVTIHFADGESEAFDLCIGADGIHS  152 (373)
T ss_pred             CceEEECCEEEEEEe-cCCcEEEEECCCCEEecCEEEECCCcch
Confidence            346999999999998 8888999999999999999999977543

>PTZ00383 malate:quinone oxidoreductase; Provisional

Probab=85.04  E-value=1.9  Score=44.75  Aligned_cols=43  Identities=16%  Similarity=0.074  Sum_probs=35.2

Q ss_pred             CcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChhhh
Q psy10795         90 NKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVL  133 (412)
Q Consensus        90 ~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~~L  133 (412)
                      .+|+++++|+.|...+++.+.|++.+| ++.||+||+|.-...+
T Consensus       232 v~i~~~t~V~~I~~~~~~~~~V~T~~G-~i~A~~VVvaAG~~S~  274 (497)
T PTZ00383        232 ISINLNTEVLNIERSNDSLYKIHTNRG-EIRARFVVVSACGYSL  274 (497)
T ss_pred             EEEEeCCEEEEEEecCCCeEEEEECCC-EEEeCEEEECcChhHH
Confidence            468999999999982255678999888 7999999999876543

>PRK08773 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Validated

Probab=85.04  E-value=1.9  Score=43.07  Aligned_cols=42  Identities=12%  Similarity=0.052  Sum_probs=37.2

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLG  131 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~  131 (412)
                      +.+|+.+++|++|.. ++++|+|++.+|++++||.||.|.-..
T Consensus       127 gv~i~~~~~v~~i~~-~~~~v~v~~~~g~~~~a~~vV~AdG~~  168 (392)
T PRK08773        127 GVQLHCPARVVALEQ-DADRVRLRLDDGRRLEAALAIAADGAA  168 (392)
T ss_pred             CCEEEcCCeEEEEEe-cCCeEEEEECCCCEEEeCEEEEecCCC
Confidence            567999999999998 788899999889899999999997664

>PLN02268 probable polyamine oxidase

Probab=84.81  E-value=0.77  Score=46.61  Aligned_cols=28  Identities=21%  Similarity=0.471  Sum_probs=25.8

Q ss_pred             hHHHHhhcCCccccceEEEEcCCCCccC
Q psy10795          5 ALGTLLQGLNFGTVDKIFIRFPAKWWKD   32 (412)
Q Consensus         5 ~~~~ai~~lgfgt~~Kifl~f~~~~w~~   32 (412)
                      .|.++|+++++|.+.|+++.|+++||+.
T Consensus       267 ~~~~ai~~~~~g~~~Kv~l~f~~~fw~~  294 (435)
T PLN02268        267 WKEEAISDLGVGIENKIALHFDSVFWPN  294 (435)
T ss_pred             HHHHHHHhCCccceeEEEEEeCCCCCCC
Confidence            5789999999999999999999999953

>PRK05732 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated

Probab=84.77  E-value=2  Score=42.81  Aligned_cols=42  Identities=14%  Similarity=0.157  Sum_probs=36.8

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLG  131 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~  131 (412)
                      +.+|+++++|++|.. .+++|.|++.+|.++.+|.||.|.-..
T Consensus       127 g~~~~~~~~v~~i~~-~~~~~~v~~~~g~~~~a~~vI~AdG~~  168 (395)
T PRK05732        127 GVTLHCPARVANVER-TQGSVRVTLDDGETLTGRLLVAADGSH  168 (395)
T ss_pred             CcEEEcCCEEEEEEE-cCCeEEEEECCCCEEEeCEEEEecCCC
Confidence            567999999999998 788899999899889999999997654

>PRK11259 solA N-methyltryptophan oxidase; Provisional

Probab=84.50  E-value=1.9  Score=42.63  Aligned_cols=42  Identities=26%  Similarity=0.495  Sum_probs=36.8

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChhh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGV  132 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~~  132 (412)
                      +.+|+++++|++|.. .++++.|++.+| ++.||+||+|+-...
T Consensus       163 gv~i~~~~~v~~i~~-~~~~~~v~~~~g-~~~a~~vV~A~G~~~  204 (376)
T PRK11259        163 GAELLFNEPVTAIEA-DGDGVTVTTADG-TYEAKKLVVSAGAWV  204 (376)
T ss_pred             CCEEECCCEEEEEEe-eCCeEEEEeCCC-EEEeeEEEEecCcch
Confidence            678999999999998 777889999888 799999999998643

>PRK11728 hydroxyglutarate oxidase; Provisional

Probab=84.18  E-value=2.2  Score=42.72  Aligned_cols=42  Identities=29%  Similarity=0.323  Sum_probs=36.4

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChhh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGV  132 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~~  132 (412)
                      +.+|+++++|++|.. .++++.|.+.+| ++.||+||+|.....
T Consensus       163 Gv~i~~~~~V~~i~~-~~~~~~V~~~~g-~i~ad~vV~A~G~~s  204 (393)
T PRK11728        163 GGEIRLGAEVTALDE-HANGVVVRTTQG-EYEARTLINCAGLMS  204 (393)
T ss_pred             CCEEEcCCEEEEEEe-cCCeEEEEECCC-EEEeCEEEECCCcch
Confidence            678999999999998 777888888877 799999999988753

>TIGR00275 flavoprotein, HI0933 family

Probab=83.84  E-value=2.9  Score=42.15  Aligned_cols=40  Identities=30%  Similarity=0.362  Sum_probs=34.1

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCCh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPL  130 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~  130 (412)
                      +.+|+++++|++|.. +++.+.|++ ++.++.+|+||+|+..
T Consensus       119 gv~i~~~~~V~~i~~-~~~~~~v~~-~~~~i~ad~VIlAtG~  158 (400)
T TIGR00275       119 GVEILTNSKVKSIKK-DDNGFGVET-SGGEYEADKVILATGG  158 (400)
T ss_pred             CCEEEeCCEEEEEEe-cCCeEEEEE-CCcEEEcCEEEECCCC
Confidence            568999999999987 677788877 4568999999999986

The model when searched with a partial length search brings in proteins with a dinucleotide-binding motif (Rossman fold) over the initial 40 residues of the model, including oxidoreductases and dehydrogenases. Partially characterized members include an FAD-binding protein from Bacillus cereus and flavoprotein HI0933 from Haemophilus influenzae.

>PRK06834 hypothetical protein; Provisional

Probab=83.80  E-value=2.2  Score=44.18  Aligned_cols=42  Identities=21%  Similarity=0.126  Sum_probs=36.7

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLG  131 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~  131 (412)
                      +.+|+++++|++|.. ++++|.|++.+|++++||+||.|-=..
T Consensus       114 gv~i~~~~~v~~v~~-~~~~v~v~~~~g~~i~a~~vVgADG~~  155 (488)
T PRK06834        114 GVPIYRGREVTGFAQ-DDTGVDVELSDGRTLRAQYLVGCDGGR  155 (488)
T ss_pred             CCEEEcCCEEEEEEE-cCCeEEEEECCCCEEEeCEEEEecCCC
Confidence            567999999999998 888899998888899999999997543

>COG1231 Monoamine oxidase [Amino acid transport and metabolism]

Probab=83.44  E-value=0.89  Score=45.86  Aligned_cols=31  Identities=19%  Similarity=0.546  Sum_probs=27.7

Q ss_pred             hhhHHHHhhcCCccccceEEEEcCCCCccCC
Q psy10795          3 QIALGTLLQGLNFGTVDKIFIRFPAKWWKDG   33 (412)
Q Consensus         3 ~~~~~~ai~~lgfgt~~Kifl~f~~~~w~~~   33 (412)
                      ...+++++++..+|..+||+++|++|||.+.
T Consensus       273 ~~~~~~a~~~~~y~~~~K~~v~f~rpFWee~  303 (450)
T COG1231         273 PAEYKQAAKGVPYGSATKIGVAFSRPFWEEA  303 (450)
T ss_pred             CHHHHHHhcCcCcchheeeeeecCchhhhhc
Confidence            4578999999999999999999999999553

>COG1233 Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=83.39  E-value=1.7  Score=45.07  Aligned_cols=44  Identities=25%  Similarity=0.244  Sum_probs=37.3

Q ss_pred             CCcEEcCCeEEEEEecCCC-cEEEEeCCCcEEEeCEEEEeCChhhh
Q psy10795         89 SNKILYKKEVNKIDWEYQN-GAAVSCSDGSVYTAYKIIITVPLGVL  133 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~-~V~V~~~~G~~~~ad~VIvTvP~~~L  133 (412)
                      |++|+++++|++|.- +++ +++|++.+|..+++|.||+++-...+
T Consensus       238 Gg~I~~~~~V~~I~v-~~g~g~~~~~~~g~~~~ad~vv~~~~~~~~  282 (487)
T COG1233         238 GGEIRTGAEVSQILV-EGGKGVGVRTSDGENIEADAVVSNADPALL  282 (487)
T ss_pred             CCEEECCCceEEEEE-eCCcceEEeccccceeccceeEecCchhhh
Confidence            789999999999998 554 68888888878899999999888333

>PRK07190 hypothetical protein; Provisional

Probab=83.09  E-value=2.3  Score=44.04  Aligned_cols=43  Identities=16%  Similarity=0.120  Sum_probs=37.9

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChhh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGV  132 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~~  132 (412)
                      +.+|++++.|++|.+ ++++|.+++.+|++++|++||.|-=...
T Consensus       123 Gv~v~~~~~v~~l~~-~~~~v~v~~~~g~~v~a~~vVgADG~~S  165 (487)
T PRK07190        123 GAAVKRNTSVVNIEL-NQAGCLTTLSNGERIQSRYVIGADGSRS  165 (487)
T ss_pred             CCEEEeCCEEEEEEE-cCCeeEEEECCCcEEEeCEEEECCCCCH
Confidence            568999999999998 7888988888888999999999987654

>PRK08013 oxidoreductase; Provisional

Probab=82.66  E-value=2.5  Score=42.38  Aligned_cols=42  Identities=24%  Similarity=0.333  Sum_probs=36.8

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLG  131 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~  131 (412)
                      +.+|++++.|++|+. ++++|.|+..+|++++||.||-|==..
T Consensus       126 ~v~i~~~~~v~~i~~-~~~~v~v~~~~g~~i~a~lvVgADG~~  167 (400)
T PRK08013        126 DITLLAPAELQQVAW-GENEAFLTLKDGSMLTARLVVGADGAN  167 (400)
T ss_pred             CcEEEcCCeeEEEEe-cCCeEEEEEcCCCEEEeeEEEEeCCCC
Confidence            457999999999998 788899999999999999999986654

>PRK08850 2-octaprenyl-6-methoxyphenol hydroxylase; Validated

Probab=82.35  E-value=2.6  Score=42.32  Aligned_cols=42  Identities=14%  Similarity=0.101  Sum_probs=37.1

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLG  131 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~  131 (412)
                      +.+|+++++|++|.. +++.+.|++.+|++++||.||.|-=..
T Consensus       126 ~v~v~~~~~v~~i~~-~~~~~~v~~~~g~~~~a~lvIgADG~~  167 (405)
T PRK08850        126 NVTLLMPARCQSIAV-GESEAWLTLDNGQALTAKLVVGADGAN  167 (405)
T ss_pred             CeEEEcCCeeEEEEe-eCCeEEEEECCCCEEEeCEEEEeCCCC
Confidence            457999999999998 788899999999999999999998753

>PLN02172 flavin-containing monooxygenase FMO GS-OX

Probab=81.97  E-value=2.3  Score=43.76  Aligned_cols=41  Identities=7%  Similarity=0.011  Sum_probs=32.9

Q ss_pred             CcEEcCCeEEEEEecCCCcEEEEeCCC--c--EEEeCEEEEeCChh
Q psy10795         90 NKILYKKEVNKIDWEYQNGAAVSCSDG--S--VYTAYKIIITVPLG  131 (412)
Q Consensus        90 ~~I~ln~~V~~I~~~~~~~V~V~~~~G--~--~~~ad~VIvTvP~~  131 (412)
                      ..|++|+.|++|+. .+++|+|++.++  .  +..+|+||+|+-..
T Consensus       128 ~~I~~~t~V~~V~~-~~~~w~V~~~~~~~~~~~~~~d~VIvAtG~~  172 (461)
T PLN02172        128 EMVRFETEVVRVEP-VDGKWRVQSKNSGGFSKDEIFDAVVVCNGHY  172 (461)
T ss_pred             ceEEecCEEEEEee-cCCeEEEEEEcCCCceEEEEcCEEEEeccCC
Confidence            34999999999998 778899987643  2  45799999998763

>PRK08163 salicylate hydroxylase; Provisional

Probab=81.81  E-value=2.7  Score=41.91  Aligned_cols=41  Identities=17%  Similarity=0.101  Sum_probs=36.0

Q ss_pred             CcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChh
Q psy10795         90 NKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLG  131 (412)
Q Consensus        90 ~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~  131 (412)
                      .+|+++++|++|.. ++++|.|++.+|+++.||.||.|.=..
T Consensus       125 v~~~~~~~v~~i~~-~~~~v~v~~~~g~~~~ad~vV~AdG~~  165 (396)
T PRK08163        125 VEFRTSTHVVGIEQ-DGDGVTVFDQQGNRWTGDALIGCDGVK  165 (396)
T ss_pred             cEEEeCCEEEEEec-CCCceEEEEcCCCEEecCEEEECCCcC
Confidence            57999999999998 778899999999899999999997554

>PRK09897 hypothetical protein; Provisional

Probab=81.38  E-value=2.6  Score=44.18  Aligned_cols=40  Identities=10%  Similarity=0.026  Sum_probs=33.9

Q ss_pred             CcEEcCCeEEEEEecCCCcEEEEeCC-CcEEEeCEEEEeCCh
Q psy10795         90 NKILYKKEVNKIDWEYQNGAAVSCSD-GSVYTAYKIIITVPL  130 (412)
Q Consensus        90 ~~I~ln~~V~~I~~~~~~~V~V~~~~-G~~~~ad~VIvTvP~  130 (412)
                      ..|+.+++|+.|+. .++++.|++.+ |.++.||+||+|+-.
T Consensus       124 V~v~~~~~V~~I~~-~~~g~~V~t~~gg~~i~aD~VVLAtGh  164 (534)
T PRK09897        124 VAVYESCQVTDLQI-TNAGVMLATNQDLPSETFDLAVIATGH  164 (534)
T ss_pred             EEEEECCEEEEEEE-eCCEEEEEECCCCeEEEcCEEEECCCC
Confidence            36788999999998 78889998865 468899999999875

>PRK06116 glutathione reductase; Validated

Probab=81.13  E-value=3.2  Score=42.35  Aligned_cols=41  Identities=12%  Similarity=0.170  Sum_probs=34.4

Q ss_pred             CCcEEcCCeEEEEEecCCCc-EEEEeCCCcEEEeCEEEEeCCh
Q psy10795         89 SNKILYKKEVNKIDWEYQNG-AAVSCSDGSVYTAYKIIITVPL  130 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~-V~V~~~~G~~~~ad~VIvTvP~  130 (412)
                      +-+|++++.|++|.. ++++ +.|++.+|+++.+|.||+++-.
T Consensus       222 GV~i~~~~~V~~i~~-~~~g~~~v~~~~g~~i~~D~Vv~a~G~  263 (450)
T PRK06116        222 GIRLHTNAVPKAVEK-NADGSLTLTLEDGETLTVDCLIWAIGR  263 (450)
T ss_pred             CcEEECCCEEEEEEE-cCCceEEEEEcCCcEEEeCEEEEeeCC
Confidence            568999999999987 5544 7888888989999999999743

>PRK01747 mnmC bifunctional tRNA (mnm(5)s(2)U34)-methyltransferase/FAD-dependent cmnm(5)s(2)U34 oxidoreductase; Reviewed

Probab=81.07  E-value=2.6  Score=45.51  Aligned_cols=43  Identities=14%  Similarity=0.266  Sum_probs=37.1

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChhh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGV  132 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~~  132 (412)
                      +.+|+.+++|++|+. .+++|.|++.+|..+.||.||+|.-...
T Consensus       421 Gv~i~~~~~V~~i~~-~~~~~~v~t~~g~~~~ad~VV~A~G~~s  463 (662)
T PRK01747        421 QLTIHFGHEVARLER-EDDGWQLDFAGGTLASAPVVVLANGHDA  463 (662)
T ss_pred             CcEEEeCCEeeEEEE-eCCEEEEEECCCcEEECCEEEECCCCCc
Confidence            467999999999998 7788999998887788999999987754

>COG2509 Uncharacterized FAD-dependent dehydrogenases [General function prediction only]

Probab=81.03  E-value=2.7  Score=42.47  Aligned_cols=42  Identities=19%  Similarity=0.279  Sum_probs=36.2

Q ss_pred             CCcEEcCCeEEEEEecCCCcE-EEEeCCCcEEEeCEEEEeCChh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGA-AVSCSDGSVYTAYKIIITVPLG  131 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V-~V~~~~G~~~~ad~VIvTvP~~  131 (412)
                      |.+|++++.|..|.. .++.+ .|.+++|.++.+|+||+|+--+
T Consensus       187 G~ei~f~t~VeDi~~-~~~~~~~v~~~~g~~i~~~~vvlA~Grs  229 (486)
T COG2509         187 GGEIRFNTEVEDIEI-EDNEVLGVKLTKGEEIEADYVVLAPGRS  229 (486)
T ss_pred             CcEEEeeeEEEEEEe-cCCceEEEEccCCcEEecCEEEEccCcc
Confidence            789999999999998 66654 5778899999999999998765

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	412
4fwe_A	796	Native Structure Of Lsd2 /aof1/kdm1b In Spacegroup		1e-16
4gu1_A	784	Crystal Structure Of Lsd2 Length = 784		1e-16
4gur_A	776	Crystal Structure Of Lsd2-npac With H3 In Space Gro		1e-16
1b37_A	472	A 30 Angstrom U-Shaped Catalytic Tunnel In The Crys		1e-14
3kpf_A	478	X-Ray Structure Of The Mutant Lys300met Of Polyamin		6e-14
2dw4_A	660	Crystal Structure Of Human Lsd1 At 2.3 A Resolution		9e-13
2hko_A	664	Crystal Structure Of Lsd1 Length = 664		9e-13
2ejr_A	662	Lsd1-Tranylcypromine Complex Length = 662		9e-13
2h94_A	664	Crystal Structure And Mechanism Of Human Lysine-Spe		9e-13
2iw5_A	666	Structural Basis For Corest-dependent Demethylation		1e-12
2v1d_A	730	Structural Basis Of Lsd1-Corest Selectivity In Hist		1e-12
2x0l_A	734	Crystal Structure Of A Neuro-Specific Splicing Vari		1e-12
2xaf_A	852	Crystal Structure Of Lsd1-Corest In Complex With Pa		4e-12
1yy5_A	513	Crystal Structure Of Fms1, A Polyamine Oxidase From		1e-05
1z6l_A	516	Crystal Structure Of Fms1 In Complex With Its Subst		1e-05
4gdp_A	516	Yeast Polyamine Oxidase Fms1, N195a Mutant Length =		2e-05
4ech_A	516	Yeast Polyamine Oxidase Fms1, H67q Mutant Length =		2e-05
1rsg_A	516	Crystal Structure Of The Polyamine Oxidase Fms1 Fro		2e-05

>pdb|4FWE|A Chain A, Native Structure Of Lsd2 /aof1/kdm1b In Spacegroup Of C2221 At 2.13a Length = 796

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 114/289 (39%), Gaps = 62/289 (21%)
Query: 92  ILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNA 151
           I  K  V  ID+   +   V+ +DG+ Y+A K+++TVPL +L+   I F P L  +K+ A
Sbjct: 566 IQLKSPVQCIDYS-GDEVQVTTTDGTGYSAQKVLVTVPLALLQKGAIQFNPPLSEKKMKA 624
Query: 152 IEGLNFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFY 211
           I  L  G ++KI ++FP ++W    QG +F+              HV       G+   +
Sbjct: 625 INSLGAGIIEKIALQFPYRFWDSKVQGADFFG-------------HVPPSASKRGLFAVF 671
Query: 212 MDAEDPL----TLLGWIAGPTARYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVRS 267
            D  DP      L+  IAG     + TL    +    M   R        +P+P +   +
Sbjct: 672 YDM-DPQKKHSVLMSVIAGEAVASVRTLDDKQVLQQCMATLRELFKEQE-VPDPTKYFVT 729
Query: 268 AWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLNTS 327
            WS +P  + +YS                                           + T 
Sbjct: 730 RWSTDPWIQMAYSF------------------------------------------VKTG 747
Query: 328 AADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVY 376
            +  A  +I  + +  + FAGEAT+ H   TV GA  SG RE +    +
Sbjct: 748 GSGEAYDIIAEDIQGTVFFAGEATNRHFPQTVTGAYLSGVREASKIAAF 796

>pdb|4GU1|A Chain A, Crystal Structure Of Lsd2 Length = 784

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 114/289 (39%), Gaps = 62/289 (21%)
Query: 92  ILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNA 151
           I  K  V  ID+   +   V+ +DG+ Y+A K+++TVPL +L+   I F P L  +K+ A
Sbjct: 554 IQLKSPVQCIDYS-GDEVQVTTTDGTGYSAQKVLVTVPLALLQKGAIQFNPPLSEKKMKA 612
Query: 152 IEGLNFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFY 211
           I  L  G ++KI ++FP ++W    QG +F+              HV       G+   +
Sbjct: 613 INSLGAGIIEKIALQFPYRFWDSKVQGADFFG-------------HVPPSASKRGLFAVF 659
Query: 212 MDAEDPL----TLLGWIAGPTARYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVRS 267
            D  DP      L+  IAG     + TL    +    M   R        +P+P +   +
Sbjct: 660 YDM-DPQKKHSVLMSVIAGEAVASVRTLDDKQVLQQCMATLRELFKEQE-VPDPTKYFVT 717
Query: 268 AWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLNTS 327
            WS +P  + +YS                                           + T 
Sbjct: 718 RWSTDPWIQMAYSF------------------------------------------VKTG 735
Query: 328 AADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVY 376
            +  A  +I  + +  + FAGEAT+ H   TV GA  SG RE +    +
Sbjct: 736 GSGEAYDIIAEDIQGTVFFAGEATNRHFPQTVTGAYLSGVREASKIAAF 784

>pdb|4GUR|A Chain A, Crystal Structure Of Lsd2-npac With H3 In Space Group P21 Length = 776

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 114/289 (39%), Gaps = 62/289 (21%)
Query: 92  ILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNA 151
           I  K  V  ID+   +   V+ +DG+ Y+A K+++TVPL +L+   I F P L  +K+ A
Sbjct: 546 IQLKSPVQCIDYS-GDEVQVTTTDGTGYSAQKVLVTVPLALLQKGAIQFNPPLSEKKMKA 604
Query: 152 IEGLNFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFY 211
           I  L  G ++KI ++FP ++W    QG +F+              HV       G+   +
Sbjct: 605 INSLGAGIIEKIALQFPYRFWDSKVQGADFFG-------------HVPPSASKRGLFAVF 651
Query: 212 MDAEDPL----TLLGWIAGPTARYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVRS 267
            D  DP      L+  IAG     + TL    +    M   R        +P+P +   +
Sbjct: 652 YDM-DPQKKHSVLMSVIAGEAVASVRTLDDKQVLQQCMATLRELFKEQE-VPDPTKYFVT 709
Query: 268 AWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLNTS 327
            WS +P  + +YS                                           + T 
Sbjct: 710 RWSTDPWIQMAYSF------------------------------------------VKTG 727
Query: 328 AADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVY 376
            +  A  +I  + +  + FAGEAT+ H   TV GA  SG RE +    +
Sbjct: 728 GSGEAYDIIAEDIQGTVFFAGEATNRHFPQTVTGAYLSGVREASKIAAF 776

>pdb|1B37|A Chain A, A 30 Angstrom U-Shaped Catalytic Tunnel In The Crystal Structure Of Polyamine Oxidase Length = 472

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 77/284 (27%), Positives = 120/284 (42%), Gaps = 61/284 (21%)
Query: 87  DLSNKILYKK-EVNKIDWEYQ---NGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVP 142
           D S KI+  + ++NK+  E +    G  V   D SVY+A  ++++  LGVL+S LI F P
Sbjct: 221 DKSGKIVDPRLQLNKVVREIKYSPGGVTVKTEDNSVYSADYVMVSASLGVLQSDLIQFKP 280
Query: 143 SLPAQKLNAIEGLNFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKP 202
            LP  K+ AI   +     KIF++FP K+W +G +G  F+     +   +          
Sbjct: 281 KLPTWKVRAIYQFDMAVYTKIFLKFPRKFWPEG-KGREFFLYASSRRGYYG--------- 330
Query: 203 WVWGILGFYMDAEDPLTLLGWIAGPTARYMETLPMAVLQADIMRLFRHFLGGAYIIPEPI 262
            VW    F     D   LL  +    +R +E       +A+IM++ R    G   +P+  
Sbjct: 331 -VWQ--EFEKQYPDANVLLVTVTDEESRRIEQQSDEQTKAEIMQVLRKMFPGK-DVPDAT 386
Query: 263 RIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSD 322
            I+   W  +  ++G++S+                        P+    Y+   LR    
Sbjct: 387 DILVPRWWSDRFYKGTFSNW-----------------------PVGVNRYEYDQLR---- 419
Query: 323 RLNTSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESG 366
                     APV    GR  + F GE TS H+ G V+GA  SG
Sbjct: 420 ----------APV----GR--VYFTGEHTSEHYNGYVHGAYLSG 447

>pdb|3KPF|A Chain A, X-Ray Structure Of The Mutant Lys300met Of Polyamine Oxidase From Zea Mays Length = 478

Iteration: 1
 Score = 75.1 bits (183), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 76/284 (26%), Positives = 119/284 (41%), Gaps = 61/284 (21%)
Query: 87  DLSNKILYKK-EVNKIDWEYQ---NGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVP 142
           D S KI+  + ++NK+  E +    G  V   D SVY+A  ++++  LGVL+S LI F P
Sbjct: 221 DKSGKIVDPRLQLNKVVREIKYSPGGVTVKTEDNSVYSADYVMVSASLGVLQSDLIQFKP 280
Query: 143 SLPAQKLNAIEGLNFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKP 202
            LP  K+ AI   +      IF++FP K+W +G +G  F+     +   +          
Sbjct: 281 KLPTWKVRAIYQFDMAVYTMIFLKFPRKFWPEG-KGREFFLYASSRRGYYG--------- 330
Query: 203 WVWGILGFYMDAEDPLTLLGWIAGPTARYMETLPMAVLQADIMRLFRHFLGGAYIIPEPI 262
            VW    F     D   LL  +    +R +E       +A+IM++ R    G   +P+  
Sbjct: 331 -VWQ--EFEKQYPDANVLLVTVTDEESRRIEQQSDEQTKAEIMQVLRKMFPGK-DVPDAT 386
Query: 263 RIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSD 322
            I+   W  +  ++G++S+                        P+    Y+   LR    
Sbjct: 387 DILVPRWWSDRFYKGTFSNW-----------------------PVGVNRYEYDQLR---- 419
Query: 323 RLNTSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESG 366
                     APV    GR  + F GE TS H+ G V+GA  SG
Sbjct: 420 ----------APV----GR--VYFTGEHTSEHYNGYVHGAYLSG 447

>pdb|2DW4|A Chain A, Crystal Structure Of Human Lsd1 At 2.3 A Resolution Length = 660

Iteration: 1
 Score = 71.2 bits (173), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 104/262 (39%), Gaps = 53/262 (20%)
Query: 112 SCSDGSVYTAYKIIITVPLGVLKSK--LITFVPSLPAQKLNAIEGLNFGTVDKIFIRFPA 169
           S S   +Y    ++ T+PLGVLK +   + FVP LP  K +A++ + FG ++K+ + F  
Sbjct: 438 STSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDR 497
Query: 170 KWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWIAGPTA 229
            +W      F                 HV       G L  + +      LL  +AG  A
Sbjct: 498 VFWDPSVNLFG----------------HVGSTTASRGELFLFWNLYKAPILLALVAGEAA 541
Query: 230 RYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVRSAWSINPHFRGSYSH--HGPTQH 287
             ME +   V+    + + +   G +  +P+P   V S W  +P  RGSYS+   G + +
Sbjct: 542 GIMENISDDVIVGRCLAILKGIFGSS-AVPQPKETVVSRWRADPWARGSYSYVAAGSSGN 600
Query: 288 QCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLNTSAADLAAPVINREGRPVLLFA 347
               + +        P AP      QP                           P L FA
Sbjct: 601 DYDLMAQPITPGPSIPGAP------QPI--------------------------PRLFFA 628
Query: 348 GEATSPHHYGTVNGAVESGARE 369
           GE T  ++  TV+GA+ SG RE
Sbjct: 629 GEHTIRNYPATVHGALLSGLRE 650

>pdb|2HKO|A Chain A, Crystal Structure Of Lsd1 Length = 664

Iteration: 1
 Score = 71.2 bits (173), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 104/262 (39%), Gaps = 53/262 (20%)
Query: 112 SCSDGSVYTAYKIIITVPLGVLKSK--LITFVPSLPAQKLNAIEGLNFGTVDKIFIRFPA 169
           S S   +Y    ++ T+PLGVLK +   + FVP LP  K +A++ + FG ++K+ + F  
Sbjct: 438 STSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDR 497
Query: 170 KWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWIAGPTA 229
            +W      F                 HV       G L  + +      LL  +AG  A
Sbjct: 498 VFWDPSVNLFG----------------HVGSTTASRGELFLFWNLYKAPILLALVAGEAA 541
Query: 230 RYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVRSAWSINPHFRGSYSH--HGPTQH 287
             ME +   V+    + + +   G +  +P+P   V S W  +P  RGSYS+   G + +
Sbjct: 542 GIMENISDDVIVGRCLAILKGIFGSS-AVPQPKETVVSRWRADPWARGSYSYVAAGSSGN 600
Query: 288 QCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLNTSAADLAAPVINREGRPVLLFA 347
               + +        P AP      QP                           P L FA
Sbjct: 601 DYDLMAQPITPGPSIPGAP------QPI--------------------------PRLFFA 628
Query: 348 GEATSPHHYGTVNGAVESGARE 369
           GE T  ++  TV+GA+ SG RE
Sbjct: 629 GEHTIRNYPATVHGALLSGLRE 650

>pdb|2EJR|A Chain A, Lsd1-Tranylcypromine Complex Length = 662

Iteration: 1
 Score = 71.2 bits (173), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 104/263 (39%), Gaps = 53/263 (20%)
Query: 112 SCSDGSVYTAYKIIITVPLGVLKSK--LITFVPSLPAQKLNAIEGLNFGTVDKIFIRFPA 169
           S S   +Y    ++ T+PLGVLK +   + FVP LP  K +A++ + FG ++K+ + F  
Sbjct: 438 STSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDR 497
Query: 170 KWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWIAGPTA 229
            +W      F                 HV       G L  + +      LL  +AG  A
Sbjct: 498 VFWDPSVNLFG----------------HVGSTTASRGELFLFWNLYKAPILLALVAGEAA 541
Query: 230 RYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVRSAWSINPHFRGSYSH--HGPTQH 287
             ME +   V+    + + +   G +  +P+P   V S W  +P  RGSYS+   G + +
Sbjct: 542 GIMENISDDVIVGRCLAILKGIFGSS-AVPQPKETVVSRWRADPWARGSYSYVAAGSSGN 600
Query: 288 QCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLNTSAADLAAPVINREGRPVLLFA 347
               + +        P AP      QP                           P L FA
Sbjct: 601 DYDLMAQPITPGPSIPGAP------QPI--------------------------PRLFFA 628
Query: 348 GEATSPHHYGTVNGAVESGARET 370
           GE T  ++  TV+GA+ SG RE 
Sbjct: 629 GEHTIRNYPATVHGALLSGLREA 651

>pdb|2H94|A Chain A, Crystal Structure And Mechanism Of Human Lysine-Specific Demethylase-1 Length = 664

Iteration: 1
 Score = 71.2 bits (173), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 104/262 (39%), Gaps = 53/262 (20%)
Query: 112 SCSDGSVYTAYKIIITVPLGVLKSK--LITFVPSLPAQKLNAIEGLNFGTVDKIFIRFPA 169
           S S   +Y    ++ T+PLGVLK +   + FVP LP  K +A++ + FG ++K+ + F  
Sbjct: 438 STSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDR 497
Query: 170 KWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWIAGPTA 229
            +W      F                 HV       G L  + +      LL  +AG  A
Sbjct: 498 VFWDPSVNLFG----------------HVGSTTASRGELFLFWNLYKAPILLALVAGEAA 541
Query: 230 RYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVRSAWSINPHFRGSYSH--HGPTQH 287
             ME +   V+    + + +   G +  +P+P   V S W  +P  RGSYS+   G + +
Sbjct: 542 GIMENISDDVIVGRCLAILKGIFGSS-AVPQPKETVVSRWRADPWARGSYSYVAAGSSGN 600
Query: 288 QCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLNTSAADLAAPVINREGRPVLLFA 347
               + +        P AP      QP                           P L FA
Sbjct: 601 DYDLMAQPITPGPSIPGAP------QPI--------------------------PRLFFA 628
Query: 348 GEATSPHHYGTVNGAVESGARE 369
           GE T  ++  TV+GA+ SG RE
Sbjct: 629 GEHTIRNYPATVHGALLSGLRE 650

>pdb|2IW5|A Chain A, Structural Basis For Corest-dependent Demethylation Of Nucleosomes By The Human Lsd1 Histone Demethylase Length = 666

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 104/262 (39%), Gaps = 53/262 (20%)
Query: 112 SCSDGSVYTAYKIIITVPLGVLKSK--LITFVPSLPAQKLNAIEGLNFGTVDKIFIRFPA 169
           S S   +Y    ++ T+PLGVLK +   + FVP LP  K +A++ + FG ++K+ + F  
Sbjct: 439 STSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDR 498
Query: 170 KWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWIAGPTA 229
            +W      F                 HV       G L  + +      LL  +AG  A
Sbjct: 499 VFWDPSVNLFG----------------HVGSTTASRGELFLFWNLYKAPILLALVAGEAA 542
Query: 230 RYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVRSAWSINPHFRGSYSH--HGPTQH 287
             ME +   V+    + + +   G +  +P+P   V S W  +P  RGSYS+   G + +
Sbjct: 543 GIMENISDDVIVGRCLAILKGIFGSS-AVPQPKETVVSRWRADPWARGSYSYVAAGSSGN 601
Query: 288 QCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLNTSAADLAAPVINREGRPVLLFA 347
               + +        P AP      QP                           P L FA
Sbjct: 602 DYDLMAQPITPGPSIPGAP------QPI--------------------------PRLFFA 629
Query: 348 GEATSPHHYGTVNGAVESGARE 369
           GE T  ++  TV+GA+ SG RE
Sbjct: 630 GEHTIRNYPATVHGALLSGLRE 651

>pdb|2V1D|A Chain A, Structural Basis Of Lsd1-Corest Selectivity In Histone H3 Recognition Length = 730

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 104/262 (39%), Gaps = 53/262 (20%)
Query: 112 SCSDGSVYTAYKIIITVPLGVLKSK--LITFVPSLPAQKLNAIEGLNFGTVDKIFIRFPA 169
           S S   +Y    ++ T+PLGVLK +   + FVP LP  K +A++ + FG ++K+ + F  
Sbjct: 487 STSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDR 546
Query: 170 KWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWIAGPTA 229
            +W      F                 HV       G L  + +      LL  +AG  A
Sbjct: 547 VFWDPSVNLFG----------------HVGSTTASRGELFLFWNLYKAPILLALVAGEAA 590
Query: 230 RYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVRSAWSINPHFRGSYSH--HGPTQH 287
             ME +   V+    + + +   G +  +P+P   V S W  +P  RGSYS+   G + +
Sbjct: 591 GIMENISDDVIVGRCLAILKGIFGSS-AVPQPKETVVSRWRADPWARGSYSYVAAGSSGN 649
Query: 288 QCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLNTSAADLAAPVINREGRPVLLFA 347
               + +        P AP      QP                           P L FA
Sbjct: 650 DYDLMAQPITPGPSIPGAP------QPI--------------------------PRLFFA 677
Query: 348 GEATSPHHYGTVNGAVESGARE 369
           GE T  ++  TV+GA+ SG RE
Sbjct: 678 GEHTIRNYPATVHGALLSGLRE 699

>pdb|2X0L|A Chain A, Crystal Structure Of A Neuro-Specific Splicing Variant Of Human Histone Lysine Demethylase Lsd1 Length = 734

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 104/262 (39%), Gaps = 53/262 (20%)
Query: 112 SCSDGSVYTAYKIIITVPLGVLKSK--LITFVPSLPAQKLNAIEGLNFGTVDKIFIRFPA 169
           S S   +Y    ++ T+PLGVLK +   + FVP LP  K +A++ + FG ++K+ + F  
Sbjct: 491 STSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDR 550
Query: 170 KWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWIAGPTA 229
            +W      F                 HV       G L  + +      LL  +AG  A
Sbjct: 551 VFWDPSVNLFG----------------HVGSTTASRGELFLFWNLYKAPILLALVAGEAA 594
Query: 230 RYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVRSAWSINPHFRGSYSH--HGPTQH 287
             ME +   V+    + + +   G +  +P+P   V S W  +P  RGSYS+   G + +
Sbjct: 595 GIMENISDDVIVGRCLAILKGIFGSS-AVPQPKETVVSRWRADPWARGSYSYVAAGSSGN 653
Query: 288 QCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLNTSAADLAAPVINREGRPVLLFA 347
               + +        P AP      QP                           P L FA
Sbjct: 654 DYDLMAQPITPGPSIPGAP------QPI--------------------------PRLFFA 681
Query: 348 GEATSPHHYGTVNGAVESGARE 369
           GE T  ++  TV+GA+ SG RE
Sbjct: 682 GEHTIRNYPATVHGALLSGLRE 703

>pdb|2XAF|A Chain A, Crystal Structure Of Lsd1-Corest In Complex With Para-Bromo- (+)-Cis-2-Phenylcyclopropyl-1-Amine Length = 852

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 104/262 (39%), Gaps = 53/262 (20%)
Query: 112 SCSDGSVYTAYKIIITVPLGVLKSK--LITFVPSLPAQKLNAIEGLNFGTVDKIFIRFPA 169
           S S   +Y    ++ T+PLGVLK +   + FVP LP  K +A++ + FG ++K+ + F  
Sbjct: 609 STSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDR 668
Query: 170 KWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWIAGPTA 229
            +W      F                 HV       G L  + +      LL  +AG  A
Sbjct: 669 VFWDPSVNLFG----------------HVGSTTASRGELFLFWNLYKAPILLALVAGEAA 712
Query: 230 RYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVRSAWSINPHFRGSYSHHGPTQHQC 289
             ME +   V+    + + +   G +  +P+P   V S W  +P  RGSYS+        
Sbjct: 713 GIMENISDDVIVGRCLAILKGIFGSS-AVPQPKETVVSRWRADPWARGSYSYVA------ 765
Query: 290 RRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLNTSAADLAAPVINREGRPV--LLFA 347
                                     +  +G+D    +      P I    +P+  L FA
Sbjct: 766 --------------------------AGSSGNDYDLMAQPITPGPSIPGAPQPIPRLFFA 799
Query: 348 GEATSPHHYGTVNGAVESGARE 369
           GE T  ++  TV+GA+ SG RE
Sbjct: 800 GEHTIRNYPATVHGALLSGLRE 821

>pdb|1YY5|A Chain A, Crystal Structure Of Fms1, A Polyamine Oxidase From Yeast Length = 513

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 9/87 (10%)
Query: 97  EVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKL---------ITFVPSLPAQ 147
           EV  I  E      V+C DG+VY A  +IITVP  VL   +         I F P L   
Sbjct: 222 EVKSITREPSKNVTVNCEDGTVYNADYVIITVPQSVLNLSVQPEKNLRGRIEFQPPLKPV 281
Query: 148 KLNAIEGLNFGTVDKIFIRFPAKWWKD 174
             +A + ++FG + K+   F    W +
Sbjct: 282 IQDAFDKIHFGALGKVIFEFEECCWSN 308

>pdb|1Z6L|A Chain A, Crystal Structure Of Fms1 In Complex With Its Substrate Length = 516

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 9/87 (10%)
Query: 97  EVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKL---------ITFVPSLPAQ 147
           EV  I  E      V+C DG+VY A  +IITVP  VL   +         I F P L   
Sbjct: 222 EVKSITREPSKNVTVNCEDGTVYNADYVIITVPQSVLNLSVQPEKNLRGRIEFQPPLKPV 281
Query: 148 KLNAIEGLNFGTVDKIFIRFPAKWWKD 174
             +A + ++FG + K+   F    W +
Sbjct: 282 IQDAFDKIHFGALGKVIFEFEECCWSN 308

>pdb|4GDP|A Chain A, Yeast Polyamine Oxidase Fms1, N195a Mutant Length = 516

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 9/87 (10%)
Query: 97  EVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKL---------ITFVPSLPAQ 147
           EV  I  E      V+C DG+VY A  +IITVP  VL   +         I F P L   
Sbjct: 222 EVKSITREPSKNVTVNCEDGTVYNADYVIITVPQSVLNLSVQPEKNLRGRIEFQPPLKPV 281
Query: 148 KLNAIEGLNFGTVDKIFIRFPAKWWKD 174
             +A + ++FG + K+   F    W +
Sbjct: 282 IQDAFDKIHFGALGKVIFEFEECCWSN 308

>pdb|4ECH|A Chain A, Yeast Polyamine Oxidase Fms1, H67q Mutant Length = 516

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 9/87 (10%)
Query: 97  EVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKL---------ITFVPSLPAQ 147
           EV  I  E      V+C DG+VY A  +IITVP  VL   +         I F P L   
Sbjct: 222 EVKSITREPSKNVTVNCEDGTVYNADYVIITVPQSVLNLSVQPEKNLRGRIEFQPPLKPV 281
Query: 148 KLNAIEGLNFGTVDKIFIRFPAKWWKD 174
             +A + ++FG + K+   F    W +
Sbjct: 282 IQDAFDKIHFGALGKVIFEFEECCWSN 308

>pdb|1RSG|A Chain A, Crystal Structure Of The Polyamine Oxidase Fms1 From Yeast Length = 516

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 9/87 (10%)
Query: 97  EVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKL---------ITFVPSLPAQ 147
           EV  I  E      V+C DG+VY A  +IITVP  VL   +         I F P L   
Sbjct: 222 EVKSITREPSKNVTVNCEDGTVYNADYVIITVPQSVLNLSVQPEKNLRGRIEFQPPLKPV 281
Query: 148 KLNAIEGLNFGTVDKIFIRFPAKWWKD 174
             +A + ++FG + K+   F    W +
Sbjct: 282 IQDAFDKIHFGALGKVIFEFEECCWSN 308

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	412
1b37_A	472	Protein (polyamine oxidase); flavin-dependent amin	2e-66
1b37_A	472	Protein (polyamine oxidase); flavin-dependent amin	1e-05
1s3e_A	520	Amine oxidase [flavin-containing] B; human monoami	8e-56
2yg5_A	453	Putrescine oxidase; oxidoreductase, flavin; HET: F	3e-55
2yg5_A	453	Putrescine oxidase; oxidoreductase, flavin; HET: F	4e-05
2xag_A	852	Lysine-specific histone demethylase 1; amine oxida	7e-54
2xag_A	852	Lysine-specific histone demethylase 1; amine oxida	1e-05
2z3y_A	662	Lysine-specific histone demethylase 1; chromatin,	9e-54
2z3y_A	662	Lysine-specific histone demethylase 1; chromatin,	1e-05
1rsg_A	516	FMS1 protein; FAD binding motif, oxidoreductase; H	9e-49
1rsg_A	516	FMS1 protein; FAD binding motif, oxidoreductase; H	5e-04
3k7m_X	431	6-hydroxy-L-nicotine oxidase; enantiomeric substra	1e-41
2vvm_A	495	Monoamine oxidase N; FAD, peroxisome, flavoprotein	2e-41
2iid_A	498	L-amino-acid oxidase; flavoenzyme, FAD binding dom	1e-35
2jae_A	489	L-amino acid oxidase; oxidoreductase, dimerisation	1e-33
2e1m_B	130	L-glutamate oxidase; L-amino acid oxidase, FAD, L-	2e-13
2e1m_C	181	L-glutamate oxidase; L-amino acid oxidase, FAD, L-	8e-13
3ayj_A	721	Pro-enzyme of L-phenylalanine oxidase; amino acid	4e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-04

>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A* Length = 472

 Score =  218 bits (556), Expect = 2e-66
 Identities = 67/303 (22%), Positives = 113/303 (37%), Gaps = 58/303 (19%)

Query: 78  LLVSGQTPVDLSNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKL 137
           L    ++   +  ++   K V +I +    G  V   D SVY+A  ++++  LGVL+S L
Sbjct: 217 LKTDDKSGKIVDPRLQLNKVVREIKYS-PGGVTVKTEDNSVYSADYVMVSASLGVLQSDL 275

Query: 138 ITFVPSLPAQKLNAIEGLNFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVH 197
           I F P LP  K+ AI   +     KIF++FP K+W +G     F +              
Sbjct: 276 IQFKPKLPTWKVRAIYQFDMAVYTKIFLKFPRKFWPEGKGREFFLYASSR---------- 325

Query: 198 VDGKPWVWGILGFYMDAEDPLTLLGWIAGPTARYMETLPMAVLQADIMRLFRHFLGGAYI 257
              + +      F     D   LL  +    +R +E       +A+IM++ R    G   
Sbjct: 326 ---RGYYGVWQEFEKQYPDANVLLVTVTDEESRRIEQQSDEQTKAEIMQVLRKMFPGK-D 381

Query: 258 IPEPIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSL 317
           +P+   I+   W  +  ++G++S+     +                              
Sbjct: 382 VPDATDILVPRWWSDRFYKGTFSNWPVGVN------------------------------ 411

Query: 318 RNGSDRLNTSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVYL 377
               +        L APV        + F GE TS H+ G V+GA  SG       I   
Sbjct: 412 --RYEY-----DQLRAPVGR------VYFTGEHTSEHYNGYVHGAYLSGIDSAEILINCA 458

Query: 378 RRE 380
           +++
Sbjct: 459 QKK 461

>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A* Length = 472

 Score = 46.4 bits (110), Expect = 1e-05
 Identities = 9/74 (12%), Positives = 24/74 (32%), Gaps = 7/74 (9%)

Query: 9   LLQGLNFGTVDKIFIRFPAKWWKDGCQGFNLYWTQQDK--TDLFKDMVHVDGKP-----W 61
            +   +     KIF++FP K+W +G       +    +    ++++              
Sbjct: 289 AIYQFDMAVYTKIFLKFPRKFWPEGKGREFFLYASSRRGYYGVWQEFEKQYPDANVLLVT 348

Query: 62  VWGILGFYMDAEDP 75
           V       ++ +  
Sbjct: 349 VTDEESRRIEQQSD 362

>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ... Length = 520

 Score =  191 bits (486), Expect = 8e-56
 Identities = 52/294 (17%), Positives = 89/294 (30%), Gaps = 60/294 (20%)

Query: 87  DLSNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPA 146
            L +++  ++ V  ID   +    V   +  +Y A  +I  +P  +     I F P LP 
Sbjct: 224 LLGDRVKLERPVIYIDQT-RENVLVETLNHEMYEAKYVISAIPPTLGMK--IHFNPPLPM 280

Query: 147 QKLNAIEGLNFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWG 206
            +   I  +  G+V K  + +   +W+                           +  V  
Sbjct: 281 MRNQMITRVPLGSVIKCIVYYKEPFWRKKDYCGTMIID--------------GEEAPVAY 326

Query: 207 ILGFYMDAEDPLTLLGWIAGPTARYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVR 266
            L       +   ++G+I    AR +  L        +  L+   LG      EP+    
Sbjct: 327 TLDDTKPEGNYAAIMGFILAHKARKLARLTKEERLKKLCELYAKVLGSLE-ALEPVHYEE 385

Query: 267 SAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLNT 326
             W    +  G Y+ + P                              T           
Sbjct: 386 KNWCEEQYSGGCYTTYFPP--------------------------GILTQYG-------- 411

Query: 327 SAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVYLRRE 380
               L  PV     R  + FAG  T+ H  G + GAVE+G R     +  + + 
Sbjct: 412 --RVLRQPV----DR--IYFAGTETATHWSGYMEGAVEAGERAAREILHAMGKI 457

>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A* Length = 453

 Score =  188 bits (478), Expect = 3e-55
 Identities = 51/289 (17%), Positives = 88/289 (30%), Gaps = 64/289 (22%)

Query: 87  DLSNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPA 146
            L + +     V  + W  ++GA V         A ++I+ VP  +     I++ P LP 
Sbjct: 224 ALGDDVFLNAPVRTVKWN-ESGATVLADGDIRVEASRVILAVPPNLYSR--ISYDPPLPR 280

Query: 147 QKLNAIEGLNFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWG 206
           ++    +  + G V K+   +   +W++       +                     V  
Sbjct: 281 RQHQMHQHQSLGLVIKVHAVYETPFWREDGLSGTGFGAS----------------EVVQE 324

Query: 207 ILGFYMDAEDPLTLLGWIAGPTARYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVR 266
           +       +D  TL+ +++   A  M  L     +A I+     +LG      EP+    
Sbjct: 325 VYDNTNHEDDRGTLVAFVSDEKADAMFELSAEERKATILASLARYLGPK--AEEPVVYYE 382

Query: 267 SAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLNT 326
           S W      RG Y+                                              
Sbjct: 383 SDWGSEEWTRGCYAASFDL--------------------------GGLHRYG-------- 408

Query: 327 SAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIV 375
             AD   PV    G   + F+    +   Y  V+GAV  G R  A  I+
Sbjct: 409 --ADSRTPV----GP--IHFSCSDIAAEGYQHVDGAVRMGQRT-AADII 448

>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A* Length = 453

 Score = 44.7 bits (106), Expect = 4e-05
 Identities = 9/71 (12%), Positives = 24/71 (33%), Gaps = 4/71 (5%)

Query: 9   LLQGLNFGTVDKIFIRFPAKWWKDGCQGFNLYWTQQDKTDLFKDMVHVDGKP----WVWG 64
           + Q  + G V K+   +   +W++       +   +   +++ +  H D +     +V  
Sbjct: 285 MHQHQSLGLVIKVHAVYETPFWREDGLSGTGFGASEVVQEVYDNTNHEDDRGTLVAFVSD 344

Query: 65  ILGFYMDAEDP 75
                M     
Sbjct: 345 EKADAMFELSA 355

>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A Length = 852

 Score =  190 bits (484), Expect = 7e-54
 Identities = 63/295 (21%), Positives = 102/295 (34%), Gaps = 54/295 (18%)

Query: 91  KILYKKEVNKIDWEYQN-----GAAVSCSDGSVYTAYKIIITVPLGVLKSK--LITFVPS 143
            I     V ++ +             S S   +Y    ++ T+PLGVLK +   + FVP 
Sbjct: 583 DIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPP 642

Query: 144 LPAQKLNAIEGLNFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPW 203
           LP  K +A++ + FG ++K+ + F   +W      F    +                   
Sbjct: 643 LPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGST----------------TA 686

Query: 204 VWGILGFYMDAEDPLTLLGWIAGPTARYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIR 263
             G L  + +      LL  +AG  A  ME +   V+    + + +   G +  +P+P  
Sbjct: 687 SRGELFLFWNLYKAPILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSS-AVPQPKE 745

Query: 264 IVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDR 323
            V S W  +P  RGSYS+                                        D 
Sbjct: 746 TVVSRWRADPWARGSYSYVAAGSSGNDY------------------------------DL 775

Query: 324 LNTSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVYLR 378
           +        +     +  P L FAGE T  ++  TV+GA+ SG RE         
Sbjct: 776 MAQPITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFL 830

>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A Length = 852

 Score = 46.5 bits (109), Expect = 1e-05
 Identities = 11/70 (15%), Positives = 22/70 (31%), Gaps = 4/70 (5%)

Query: 10  LQGLNFGTVDKIFIRFPAKWWKDGCQGFNLYWTQQDKTDLFKDMVHVDGKP----WVWGI 65
           +Q + FG ++K+ + F   +W      F    +            ++   P     V G 
Sbjct: 651 VQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLYKAPILLALVAGE 710

Query: 66  LGFYMDAEDP 75
               M+    
Sbjct: 711 AAGIMENISD 720

>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A Length = 662

 Score =  188 bits (478), Expect = 9e-54
 Identities = 65/296 (21%), Positives = 105/296 (35%), Gaps = 56/296 (18%)

Query: 91  KILYKKEVNKIDWEYQNGAAV------SCSDGSVYTAYKIIITVPLGVLKSK--LITFVP 142
            I     V ++ +   +G  V      S S   +Y    ++ T+PLGVLK +   + FVP
Sbjct: 412 DIKLNTAVRQVRYT-ASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVP 470

Query: 143 SLPAQKLNAIEGLNFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKP 202
            LP  K +A++ + FG ++K+ + F   +W      F    +                  
Sbjct: 471 PLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGST----------------T 514

Query: 203 WVWGILGFYMDAEDPLTLLGWIAGPTARYMETLPMAVLQADIMRLFRHFLGGAYIIPEPI 262
              G L  + +      LL  +AG  A  ME +   V+    + + +   G +  +P+P 
Sbjct: 515 ASRGELFLFWNLYKAPILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSS-AVPQPK 573

Query: 263 RIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSD 322
             V S W  +P  RGSYS+                                        D
Sbjct: 574 ETVVSRWRADPWARGSYSYVAAGSSGNDY------------------------------D 603

Query: 323 RLNTSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVYLR 378
            +        +     +  P L FAGE T  ++  TV+GA+ SG RE         
Sbjct: 604 LMAQPITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFL 659

>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A Length = 662

 Score = 46.4 bits (109), Expect = 1e-05
 Identities = 11/70 (15%), Positives = 22/70 (31%), Gaps = 4/70 (5%)

Query: 10  LQGLNFGTVDKIFIRFPAKWWKDGCQGFNLYWTQQDKTDLFKDMVHVDGKP----WVWGI 65
           +Q + FG ++K+ + F   +W      F    +            ++   P     V G 
Sbjct: 480 VQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLYKAPILLALVAGE 539

Query: 66  LGFYMDAEDP 75
               M+    
Sbjct: 540 AAGIMENISD 549

>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A* Length = 516

 Score =  172 bits (436), Expect = 9e-49
 Identities = 65/341 (19%), Positives = 102/341 (29%), Gaps = 91/341 (26%)

Query: 88  LSNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKL---------I 138
             N +    EV  I  E      V+C DG+VY A  +IITVP  VL   +         I
Sbjct: 213 PQNWLKLSCEVKSITREPSKNVTVNCEDGTVYNADYVIITVPQSVLNLSVQPEKNLRGRI 272

Query: 139 TFVPSLPAQKLNAIEGLNFGTVDKIFIRFPAKWWKDGCQGFNFYWT-------------- 184
            F P L     +A + ++FG + K+   F    W +                        
Sbjct: 273 EFQPPLKPVIQDAFDKIHFGALGKVIFEFEECCWSNESSKIVTLANSTNEFVEIVRNAEN 332

Query: 185 -QQDKMDLFKDMVHVDGKPWVWGILGFYMD---AEDPLTLLGWIAGPTARYMETLP---- 236
             +    L ++          W    F+++   +    + +  +  P   ++E++     
Sbjct: 333 LDELDSMLEREDSQKHTSVTCWSQPLFFVNLSKSTGVASFMMLMQAPLTNHIESIREDKE 392

Query: 237 -------------MAVLQ----ADIMRLFRHFLGGAYIIPEPIRIVRSAWSINPHFRGSY 279
                        M  L      D MR   +        P    I+ S W+ +P+ RG+Y
Sbjct: 393 RLFSFFQPVLNKIMKCLDSEDVIDGMRPIENIANANK--PVLRNIIVSNWTRDPYSRGAY 450

Query: 280 SHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLNTSAADLAAPVINRE 339
           S   P                                              ++    +R 
Sbjct: 451 SACFPGDDPVD------------------------------------MVVAMSNGQDSR- 473

Query: 340 GRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVYLRRE 380
               + FAGE T     G   GA ESG RE       L+ E
Sbjct: 474 ----IRFAGEHTIMDGAGCAYGAWESGRREATRISDLLKLE 510

>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A* Length = 516

 Score = 41.3 bits (96), Expect = 5e-04
 Identities = 5/34 (14%), Positives = 10/34 (29%)

Query: 9   LLQGLNFGTVDKIFIRFPAKWWKDGCQGFNLYWT 42
               ++FG + K+   F    W +          
Sbjct: 285 AFDKIHFGALGKVIFEFEECCWSNESSKIVTLAN 318

>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A* Length = 431

 Score =  151 bits (383), Expect = 1e-41
 Identities = 49/284 (17%), Positives = 84/284 (29%), Gaps = 80/284 (28%)

Query: 92  ILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNA 151
           I  +  V  ID    +   V+  DG  + A+ +I+  P+   +   I F P+LP ++ + 
Sbjct: 220 IRLQTVVTGIDQS-GDVVNVTVKDGHAFQAHSVIVATPMNTWRR--IVFTPALPERRRSV 276

Query: 152 IEGLNFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFY 211
           IE  + G   KI I          C G                    DG      +  + 
Sbjct: 277 IEEGHGGQGLKILIHVRGAEAGIECVG--------------------DG--IFPTLYDYC 314

Query: 212 MDAEDPLTLLGWIAGPTARYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVRSAWSI 271
             +E    L+ +    +    +          +     ++L       E + I    W  
Sbjct: 315 EVSESERLLVAFTDSGSFDPTD-------IGAVKDAVLYYLPEV----EVLGIDYHDWIA 363

Query: 272 NPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLNTSAADL 331
           +P F G +                                 Q + +            +L
Sbjct: 364 DPLFEGPWVAPRV---------------------------GQFSRVH----------KEL 386

Query: 332 AAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIV 375
             P     GR  + F G   S    G + GA+E+      NAI+
Sbjct: 387 GEPA----GR--IHFVGSDVSLEFPGYIEGALETAECA-VNAIL 423

>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G* Length = 495

 Score =  152 bits (384), Expect = 2e-41
 Identities = 38/284 (13%), Positives = 84/284 (29%), Gaps = 74/284 (26%)

Query: 92  ILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNA 151
            ++   V  +  E ++ A V+  DG  + A +++ T+PL VL +  I F P+L  ++++A
Sbjct: 273 YVFGCPVRSVVNE-RDAARVTARDGREFVAKRVVCTIPLNVLST--IQFSPALSTERISA 329

Query: 152 IEGLNFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFY 211
           ++  +     K+      K  +                  +  + +   K      +G  
Sbjct: 330 MQAGHVSMCTKVHAEVDNKDMRS-----------------WTGIAYPFNKLCYA--IGDG 370

Query: 212 MDAEDPLTLLGWIAGPTARYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVRSAWSI 271
                   L+ +           +       + ++       G        R+V   W  
Sbjct: 371 TTPAGNTHLVCF-----GNSANHIQPDEDVRETLKAVGQLAPGT---FGVKRLVFHNWVK 422

Query: 272 NPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLNTSAADL 331
           +   +G++    P                              +               L
Sbjct: 423 DEFAKGAWFFSRP---------------------------GMVSECL----------QGL 445

Query: 332 AAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIV 375
                   G   ++FA    +      ++GA+E G R  A  ++
Sbjct: 446 REKH----GG--VVFANSDWALGWRSFIDGAIEEGTRA-ARVVL 482

>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A* Length = 498

 Score =  136 bits (343), Expect = 1e-35
 Identities = 51/294 (17%), Positives = 92/294 (31%), Gaps = 69/294 (23%)

Query: 87  DLSNKILYKKEVNKIDWEYQNGAAVSC----SDGSVYTAYKIIITVPLGVLKSKLITFVP 142
           D+ +K+ +  +V KI         V       +    TA  +I+      ++   I F P
Sbjct: 250 DIQDKVHFNAQVIKIQQN-DQKVTVVYETLSKETPSVTADYVIVCTTSRAVRL--IKFNP 306

Query: 143 SLPAQKLNAIEGLNFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKP 202
            L  +K +A+  +++ +  KIF+    K+W+D         T                 P
Sbjct: 307 PLLPKKAHALRSVHYRSGTKIFLTCTTKFWEDDGIHGGKSTT---------------DLP 351

Query: 203 WVWGILGFYMDAEDPLTLLGWIAGPTARYMETLPMAVLQADIMRLFR--HFLGGAYIIPE 260
             +     +        ++ +  G  A + + L        +       H L    I   
Sbjct: 352 SRFIYYPNHNFTNGVGVIIAYGIGDDANFFQALDFKDCADIVFNDLSLIHQLPKKDIQSF 411

Query: 261 PIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNG 320
               V   WS++ +  G  +   P Q Q                       +        
Sbjct: 412 CYPSVIQKWSLDKYAMGGITTFTPYQFQ----------------------HFSD------ 443

Query: 321 SDRLNTSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAI 374
                     L A     +GR  + FAGE T+  H G ++  ++SG R  A  +
Sbjct: 444 ---------PLTAS----QGR--IYFAGEYTAQAH-GWIDSTIKSGLR-AARDV 480

>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A* Length = 489

 Score =  130 bits (328), Expect = 1e-33
 Identities = 43/290 (14%), Positives = 85/290 (29%), Gaps = 63/290 (21%)

Query: 89  SNKILYKKEVNKIDWEYQNGAAVSCSDGS---VYTAYKIIITVPLGVLKSKLITFVPSLP 145
           ++ I++  EV  +      G  V  + G      TA   I T+P  ++         +LP
Sbjct: 251 TDNIVFGAEVTSMKNV-SEGVTVEYTAGGSKKSITADYAICTIPPHLVG----RLQNNLP 305

Query: 146 AQKLNAIEGLNFGTVDKIFIRFPAKWWKDGCQGFNFY-WTQQDKMDLFKDMVHVDGKPWV 204
              L A++     +  K+ I +  +WW+   + +     T +D   +     H +    V
Sbjct: 306 GDVLTALKAAKPSSSGKLGIEYSRRWWETEDRIYGGASNTDKDISQIMFPYDHYNSDRGV 365

Query: 205 WGILGFYMDAEDPLTLLGWIAGPTARYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRI 264
             ++ +Y             +G      E+L      A  +       G  Y   +    
Sbjct: 366 --VVAYYS------------SGKRQEAFESLTHRQRLAKAIAEGSEIHGEKY-TRDISSS 410

Query: 265 VRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRL 324
              +W    +   ++++   +           Y+                          
Sbjct: 411 FSGSWRRTKYSESAWANWAGSGGSHGGAATPEYE-------------------------- 444

Query: 325 NTSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAI 374
                 L  PV     +  + FAG+  S       +GA+ S        I
Sbjct: 445 -----KLLEPV----DK--IYFAGDHLSNAI-AWQHGALTSARDV-VTHI 481

>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP} Length = 130

 Score = 65.7 bits (160), Expect = 2e-13
 Identities = 12/75 (16%), Positives = 25/75 (33%), Gaps = 3/75 (4%)

Query: 114 SDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNAIEGLNFGTVDKIFIRFPAKWW- 172
           +    +T    I+T+P   L+   +   P    +K  A+   ++    K+ + F  +WW 
Sbjct: 1   AATQTWTGDLAIVTIPFSSLRF--VKVTPPFSYKKRRAVIETHYDQATKVLLEFSRRWWE 58

Query: 173 KDGCQGFNFYWTQQD 187
                          
Sbjct: 59  FTEADWKRELDAIAP 73

>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP} Length = 181

 Score = 65.7 bits (160), Expect = 8e-13
 Identities = 26/155 (16%), Positives = 44/155 (28%), Gaps = 45/155 (29%)

Query: 220 LLGWIAGPTARYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVRSAWSINPHFRGSY 279
           L  +     A   ++   A      +   +   G    +         +W  +P+  G  
Sbjct: 39  LAAYSWSDDAARWDSFDDAERYGYALENLQSVHGRRIEVFYTGAGQTQSWLRDPYACGEA 98

Query: 280 SHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLNTSAADLAAPVINRE 339
           + + P Q                        ++                 D+  P    E
Sbjct: 99  AVYTPHQM----------------------TAFHL---------------DVVRP----E 117

Query: 340 GRPVLLFAGEATSPHHYGTVNGAVESGARETANAI 374
           G   + FAGE  S  H   + GAVE+  R  A A+
Sbjct: 118 GP--VYFAGEHVSLKH-AWIEGAVETAVR-AAIAV 148

>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A* Length = 721

 Score = 51.4 bits (121), Expect = 4e-07
 Identities = 37/311 (11%), Positives = 69/311 (22%), Gaps = 64/311 (20%)

Query: 101 IDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNAIEGLNFGTV 160
               +++ A+ +  D  +         V   +L   L    P+  A+ + AI  L+    
Sbjct: 420 SRSGFEHAASQNLGDAGLGLETHTYNQVYPPLL---LSDSSPAANARIVTAIGQLHMARS 476

Query: 161 DKIFIRFPAKWWKD----GCQGFNFYWTQQDKMDLFKDMV-----HVDGKPWVWGILGFY 211
            K+F                +G        D       +V          P    +L  Y
Sbjct: 477 SKVFATVKTAALDQPWVPQWRGEPIKAVVSDSGLAASYVVPSPIVEDGQAPEYSSLLASY 536

Query: 212 MDAEDPLTLLGWIAGPTARYMETLP--MAVLQADIMRLFRHFLGGAYIIPEPIRIVRS-- 267
              +D   L                    + +  + R +R+         +P    +   
Sbjct: 537 TWEDDSTRLRHDFGLYPQNPATETGTADGMYRTMVNRAYRYVKYAGASNAQPWWFYQLLA 596

Query: 268 ----------AWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSL 317
                      W+ N    G +       H    L    +                    
Sbjct: 597 EARTADRFVFDWTTNK-TAGGFKLDMTGDHHQSNLCFRYHTHALAASL------------ 643

Query: 318 RNGSDRLNTSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVYL 377
                                + R     A ++ S    G + GA  S        ++  
Sbjct: 644 ---------------------DNR--FFIASDSYSHLG-GWLEGAFMSALN-AVAGLIVR 678

Query: 378 RREGFFEKLVN 388
              G    L  
Sbjct: 679 ANRGDVSALST 689

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.8 bits (97), Expect = 4e-04
 Identities = 68/416 (16%), Positives = 116/416 (27%), Gaps = 117/416 (28%)

Query: 39  LYWT----QQDKTDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLVSGQTPVDLSNKILY 94
           L+WT    Q++    F + V      ++        +   P     S  T        +Y
Sbjct: 67  LFWTLLSKQEEMVQKFVEEVLRINYKFLMS--PIKTEQRQP-----SMMT-------RMY 112

Query: 95  KKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSL-PAQKLNAIE 153
            ++ +++            +D  V+  Y +    P   L+  L+     L PA+ +  I+
Sbjct: 113 IEQRDRL-----------YNDNQVFAKYNVSRLQPYLKLRQALL----ELRPAKNV-LID 156

Query: 154 GLN-FGTVDKIFIRFPAKWW--KDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGF 210
           G+   G           K W   D C  +      Q KMD FK  +        W  L  
Sbjct: 157 GVLGSG-----------KTWVALDVCLSYKV----QCKMD-FK--IF-------WLNLKN 191

Query: 211 YMDAEDPLTLL---------GWIAGPTARYMETLPMAVLQADIMRLFRH-FLGGAYIIPE 260
               E  L +L          W +         L +  +QA++ RL +        ++  
Sbjct: 192 CNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLV-- 249

Query: 261 PIRIVRSAWSINPHFRGSYSHHGPTQHQCRRL----------GRSSYQQRRPPRAPLCRR 310
            +  V++A + N  F             C+ L            S+              
Sbjct: 250 -LLNVQNAKAWN-AF----------NLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMT 297

Query: 311 SYQPTSLRNGSDRLNTSAADLAAPVINREGRPVLL-FAGEATSPH--------HYGT--V 359
                        L+    DL  P       P  L    E+            H     +
Sbjct: 298 LTPDEVKSLLLKYLDCRPQDL--PREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKL 355

Query: 360 NGAVESG--ARETANAIVYLRREGFFEKLVNIAVKEL-----EHKGNQVGRILNLF 408
              +ES     E A       R   F    +I    L     +   + V  ++N  
Sbjct: 356 TTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKL 411

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	412
2z3y_A	662	Lysine-specific histone demethylase 1; chromatin,	100.0
2xag_A	852	Lysine-specific histone demethylase 1; amine oxida	100.0
1rsg_A	516	FMS1 protein; FAD binding motif, oxidoreductase; H	100.0
4gut_A	776	Lysine-specific histone demethylase 1B; histone de	100.0
1b37_A	472	Protein (polyamine oxidase); flavin-dependent amin	99.98
1s3e_A	520	Amine oxidase [flavin-containing] B; human monoami	99.97
2iid_A	498	L-amino-acid oxidase; flavoenzyme, FAD binding dom	99.97
3k7m_X	431	6-hydroxy-L-nicotine oxidase; enantiomeric substra	99.97
2yg5_A	453	Putrescine oxidase; oxidoreductase, flavin; HET: F	99.97
2vvm_A	495	Monoamine oxidase N; FAD, peroxisome, flavoprotein	99.97
2jae_A	489	L-amino acid oxidase; oxidoreductase, dimerisation	99.95
3ayj_A	721	Pro-enzyme of L-phenylalanine oxidase; amino acid	99.93
3i6d_A	470	Protoporphyrinogen oxidase; protein-inhibitor comp	99.91
3qj4_A	342	Renalase; FAD/NAD(P)-binding rossmann fold superfa	99.9
3lov_A	475	Protoporphyrinogen oxidase; structural genomics, J	99.88
2ivd_A	478	PPO, PPOX, protoporphyrinogen oxidase; porphyrin b	99.87
1sez_A	504	Protoporphyrinogen oxidase, mitochondrial; FAD-bin	99.86
2e1m_C	181	L-glutamate oxidase; L-amino acid oxidase, FAD, L-	99.83
3nks_A	477	Protoporphyrinogen oxidase; FAD containing protein	99.81
1yvv_A	336	Amine oxidase, flavin-containing; oxidoreductase,	99.71
3ka7_A	425	Oxidoreductase; structural genomics, PSI-2, protei	99.59
2e1m_B	130	L-glutamate oxidase; L-amino acid oxidase, FAD, L-	99.57
4gde_A	513	UDP-galactopyranose mutase; flavin adenine dinucle	99.57
4dsg_A	484	UDP-galactopyranose mutase; rossmann fold, flavin	99.51
2b9w_A	424	Putative aminooxidase; isomerase, conjugated linol	99.45
3nrn_A	421	Uncharacterized protein PF1083; alpha-beta protein	99.44
4dgk_A	501	Phytoene dehydrogenase; the FAD/NAD(P)-binding ros	99.21
1v0j_A	399	UDP-galactopyranose mutase; flavoprotein, isomeras	97.86
3kkj_A	336	Amine oxidase, flavin-containing; oxidoreductase,	97.77
2e1m_B	130	L-glutamate oxidase; L-amino acid oxidase, FAD, L-	96.74
3ihg_A	535	RDME; flavoenzyme, anthracycline, polyketide biosy	94.93
1rsg_A	516	FMS1 protein; FAD binding motif, oxidoreductase; H	94.54
1d5t_A	433	Guanine nucleotide dissociation inhibitor; ultra-h	93.66
2z3y_A	662	Lysine-specific histone demethylase 1; chromatin,	93.1
3dje_A	438	Fructosyl amine: oxygen oxidoreductase; fructosyl-	92.43
3nyc_A	381	D-arginine dehydrogenase; FAD, imino-arginine, oxi	92.32
2xag_A	852	Lysine-specific histone demethylase 1; amine oxida	92.2
3i3l_A	591	Alkylhalidase CMLS; flavin-dependent halogenase, c	92.19
3ps9_A	676	TRNA 5-methylaminomethyl-2-thiouridine biosynthes	91.63
2vou_A	397	2,6-dihydroxypyridine hydroxylase; oxidoreductase,	91.47
3hdq_A	397	UDP-galactopyranose mutase; substrate and inhibito	91.45
3dme_A	369	Conserved exported protein; structural genomics, P	91.36
4hb9_A	412	Similarities with probable monooxygenase; flavin,	91.13
3pvc_A	689	TRNA 5-methylaminomethyl-2-thiouridine biosynthes	90.92
2bcg_G	453	Secretory pathway GDP dissociation inhibitor; RABG	90.81
3p1w_A	475	Rabgdi protein; GDI RAB, malaria, structural genom	90.78
3v76_A	417	Flavoprotein; structural genomics, PSI-biology, NE	90.47
3rp8_A	407	Flavoprotein monooxygenase; FAD-binding protein, o	90.14
2uzz_A	372	N-methyl-L-tryptophan oxidase; N-methyltryptophan	89.84
1vg0_A	650	RAB proteins geranylgeranyltransferase component A	89.83
2xdo_A	398	TETX2 protein; tetracycline degradation, tigecycli	89.7
2oln_A	397	NIKD protein; flavoprotein, rossmann fold, oxidore	89.28
1y56_B	382	Sarcosine oxidase; dehydrogenase, protein-protein	89.24
2ywl_A	180	Thioredoxin reductase related protein; uncharacter	89.13
3fpz_A	326	Thiazole biosynthetic enzyme; FAD, mitochondrion,	89.02
2x3n_A	399	Probable FAD-dependent monooxygenase; oxidoreducta	89.02
3o0h_A	484	Glutathione reductase; ssgcid, structur genomics,	89.01
1xdi_A	499	RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno fun	88.75
2gf3_A	389	MSOX, monomeric sarcosine oxidase; flavoprotein ox	88.71
1ryi_A	382	Glycine oxidase; flavoprotein, protein-inhibitor c	88.54
2v3a_A	384	Rubredoxin reductase; alkane degradation, NADH oxi	88.52
3iwa_A	472	FAD-dependent pyridine nucleotide-disulphide oxido	87.72
3lxd_A	415	FAD-dependent pyridine nucleotide-disulphide oxido	87.37
2i0z_A	447	NAD(FAD)-utilizing dehydrogenases; structural geno	87.25
4a9w_A	357	Monooxygenase; baeyer-villiger, FAD, oxidoreductas	87.12
2gqf_A	401	Hypothetical protein HI0933; structural genomics,	87.0
3nlc_A	549	Uncharacterized protein VP0956; FAD-binding protei	86.85
2yqu_A	455	2-oxoglutarate dehydrogenase E3 component; lipoami	86.39
2gv8_A	447	Monooxygenase; FMO, FAD, NADPH, cofactor complex,	86.17
4ap3_A	549	Steroid monooxygenase; oxidoreductase, baeyer-vill	86.01
2zbw_A	335	Thioredoxin reductase; redox protein, oxidoreducta	85.83
1m6i_A	493	Programmed cell death protein 8; apoptosis, AIF, o	85.78
3fg2_P	404	Putative rubredoxin reductase; ferredoxin reductas	85.78
3gwf_A	540	Cyclohexanone monooxygenase; flavoprotein biocatal	85.51
3ayj_A	721	Pro-enzyme of L-phenylalanine oxidase; amino acid	85.01
3oc4_A	452	Oxidoreductase, pyridine nucleotide-disulfide FAM;	84.85
3d1c_A	369	Flavin-containing putative monooxygenase; NP_37310	84.78
3ef6_A	410	Toluene 1,2-dioxygenase system ferredoxin--NAD(+)	84.6
2qa2_A	499	CABE, polyketide oxygenase CABE; FAD, angucycline,	84.55
2r9z_A	463	Glutathione amide reductase; NAD, FAD, substrate s	84.26
1w4x_A	542	Phenylacetone monooxygenase; baeyer-villiger, FAD;	84.09
4gut_A	776	Lysine-specific histone demethylase 1B; histone de	84.0
1mo9_A	523	ORF3; nucleotide binding motifs, nucleotide bindin	83.87
1ges_A	450	Glutathione reductase; oxidoreductase(flavoenzyme)	83.71
3oz2_A	397	Digeranylgeranylglycerophospholipid reductase; str	83.44
3ab1_A	360	Ferredoxin--NADP reductase; oxidoreductase, electr	83.43
2qa1_A	500	PGAE, polyketide oxygenase PGAE; FAD, angucycline,	83.13
2wpf_A	495	Trypanothione reductase; oxidoreductase, trypanoso	82.71
1fec_A	490	Trypanothione reductase; redox-active center, oxid	82.58
2hqm_A	479	GR, grase, glutathione reductase; glutathione redu	82.1
3uox_A	545	Otemo; baeyer-villiger monooxygenase, oxidoreducta	82.09
2gag_B	405	Heterotetrameric sarcosine oxidase beta-subunit; f	81.87
3lzw_A	332	Ferredoxin--NADP reductase 2; ferredoxin reductase	81.25
2bi7_A	384	UDP-galactopyranose mutase; FAD, flavoprotein, iso	81.13
1k0i_A	394	P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, h	81.13
2bi7_A	384	UDP-galactopyranose mutase; FAD, flavoprotein, iso	80.81
4dna_A	463	Probable glutathione reductase; structural genomic	80.79
1i8t_A	367	UDP-galactopyranose mutase; rossman fold, FAD, con	80.66
3itj_A	338	Thioredoxin reductase 1; disulfide B flavoprotein,	80.61
1b37_A	472	Protein (polyamine oxidase); flavin-dependent amin	80.38

>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A

Probab=100.00  E-value=1.1e-36  Score=323.11  Aligned_cols=244  Identities=26%  Similarity=0.446  Sum_probs=195.1

Q ss_pred             eeeecCCcCCCCCCcEEcCCeEEEEEecCCCcEEEEeCC------CcEEEeCEEEEeCChhhhhc--CcccccCCCcHHH
Q psy10795         77 TLLVSGQTPVDLSNKILYKKEVNKIDWEYQNGAAVSCSD------GSVYTAYKIIITVPLGVLKS--KLITFVPSLPAQK  148 (412)
Q Consensus        77 vl~~~~~~~~~~~~~I~ln~~V~~I~~~~~~~V~V~~~~------G~~~~ad~VIvTvP~~~L~~--~~i~f~P~Lp~~k  148 (412)
                      .|..+++..+    +|+||++|++|.+ ++++|+|++.+      |++++||+||||+|+++|++  ..|.|.|+||+.+
T Consensus       402 ~l~~~La~~l----~I~l~~~V~~I~~-~~~~v~V~~~~~~~~~~~~~~~Ad~VI~tvP~~vL~~l~~~i~f~P~LP~~k  476 (662)
T 2z3y_A          402 CVPVALAEGL----DIKLNTAVRQVRY-TASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWK  476 (662)
T ss_dssp             HHHHHHTTTC----EEETTEEEEEEEE-ETTEEEEEEEESSCTTCEEEEEESEEEECCCHHHHHCSSCSSEEESCCCHHH
T ss_pred             HHHHHHHhcC----ceecCCeEEEEEE-CCCcEEEEEeecccCCCCeEEEeCEEEECCCHHHHhcccCceEEcCCCCHHH
Confidence            4444555543    6999999999999 78889998866      56899999999999999998  4478999999999


Q ss_pred             HHHHhcCCCcceeEEEEEcCCCccCCCCCceeEeecCCCccccccccccCCCCCccccccceeecCCCCcEEEEEecccc
Q psy10795        149 LNAIEGLNFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWIAGPT  228 (412)
Q Consensus       149 ~~ai~~l~~g~~~KV~l~f~~~fW~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~w~~~~~~~~~~~~~~~vL~~~~~g~~  228 (412)
                      .++|++++|+++.||+|.|+++||+.+...++++.+....   .       +..+.  .++.   . +.++|++|++|+.
T Consensus       477 ~~Ai~~l~~g~~~KV~l~f~~~fW~~~~~~~G~l~~~~~~---~-------~~~~~--~~~~---~-~~~vL~~~~~G~~  540 (662)
T 2z3y_A          477 TSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTAS---R-------GELFL--FWNL---Y-KAPILLALVAGEA  540 (662)
T ss_dssp             HHHHHHSEECCCEEEEEECSSCCSCTTCSEEEECCSSSTT---T-------TEEEE--EECC---S-SSSEEEEEECTHH
T ss_pred             HHHHHhCCccceeEEEEEcCcccccCCCCceeeecCCCCC---C-------CceeE--EEeC---C-CCCEEEEEeccHh
Confidence            9999999999999999999999998765566654222110   0       00111  1111   1 3358999999999


Q ss_pred             hHHHhcCCHHHHHHHHHHHHHHHhCCCCCCCCCcEEEeecCCCCCCCccccCCCCCccccccccCcccccCCCCCCCCCc
Q psy10795        229 ARYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLC  308 (412)
Q Consensus       229 a~~~~~lsdeel~~~~l~~L~~~~g~~~~~~~~~~~~~~~W~~dp~~~G~ys~~~pg~~~~~~~~~~~~~~~~~~~~p~~  308 (412)
                      +..+..++++++++.++++|+++||. ...++|..+.+++|.+|||++|+|+++.||+.                     
T Consensus       541 a~~~~~lsdee~~~~~l~~L~~~~g~-~~~~~p~~~~v~~W~~dp~~~Gsys~~~pg~~---------------------  598 (662)
T 2z3y_A          541 AGIMENISDDVIVGRCLAILKGIFGS-SAVPQPKETVVSRWRADPWARGSYSYVAAGSS---------------------  598 (662)
T ss_dssp             HHHHTTSCHHHHHHHHHHHHHHHHCT-TSSCCCSEEEECCTTTCTTTSSSCEECBTTCC---------------------
T ss_pred             HHHHHhCCHHHHHHHHHHHHHHHhCC-cccCCCceeEEEEECCCCCCCcccccCCCCCc---------------------
Confidence            99999999999999999999999985 23568999999999999999999999876641                     


Q ss_pred             cccccCCCccCCCCccCcchHHhcccccc-------CCCCceEEEecccccCcCcccchhhhhccHHHHHHHHHHHHh
Q psy10795        309 RRSYQPTSLRNGSDRLNTSAADLAAPVIN-------REGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVYLRR  379 (412)
Q Consensus       309 ~~~~~~~g~~~~~~~~~~~~~~l~~p~~~-------~~~~~~l~fAGe~t~~~~~g~~eGA~~SG~raA~~i~~~l~~  379 (412)
                                      ..+++.|++|+.+       .+..+|||||||||+..++||||||++||+|||++|++.+.+
T Consensus       599 ----------------~~~~~~l~~p~~~~~~~~~~~~~~grl~FAGe~ts~~~~g~v~GAi~SG~raA~~i~~~~~g  660 (662)
T 2z3y_A          599 ----------------GNDYDLMAQPITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFLG  660 (662)
T ss_dssp             ----------------THHHHHHHCCBCC---------CCCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHHHHTC
T ss_pred             ----------------hhhHHHHhCcCccccccccccCCCCcEEEEeccccCCCCcCHHHHHHHHHHHHHHHHHHccC
Confidence                            1345677777642       122359999999999989999999999999999999998764

>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A

Probab=100.00  E-value=6.4e-36  Score=322.30  Aligned_cols=247  Identities=26%  Similarity=0.442  Sum_probs=197.5

Q ss_pred             eeeecCCcCCCCCCcEEcCCeEEEEEecCCCcEEEEeCC------CcEEEeCEEEEeCChhhhhc--CcccccCCCcHHH
Q psy10795         77 TLLVSGQTPVDLSNKILYKKEVNKIDWEYQNGAAVSCSD------GSVYTAYKIIITVPLGVLKS--KLITFVPSLPAQK  148 (412)
Q Consensus        77 vl~~~~~~~~~~~~~I~ln~~V~~I~~~~~~~V~V~~~~------G~~~~ad~VIvTvP~~~L~~--~~i~f~P~Lp~~k  148 (412)
                      .|..+++..+    +|+||++|++|.+ ++++|+|++.+      |++++||+||||+|+++|++  ..|.|.|+||+.+
T Consensus       573 ~L~~aLa~~l----~I~Lnt~V~~I~~-~~~gV~V~~~~~~~~~~g~~i~AD~VIvTvPl~vLk~l~~~I~F~P~LP~~k  647 (852)
T 2xag_A          573 CVPVALAEGL----DIKLNTAVRQVRY-TASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWK  647 (852)
T ss_dssp             HHHHHHTTTC----CEECSEEEEEEEE-ETTEEEEEEEESSSTTCEEEEEESEEEECCCHHHHHCSSCSSEEESCCCHHH
T ss_pred             HHHHHHHhCC----CEEeCCeEEEEEE-cCCcEEEEEeecccCCCCeEEECCEEEECCCHHHHHhhhcccccCCCCCHHH
Confidence            4444555544    6999999999999 88889998765      56899999999999999998  3478999999999


Q ss_pred             HHHHhcCCCcceeEEEEEcCCCccCCCCCceeEeecCCCccccccccccCCCCCccccccceeecCCCCcEEEEEecccc
Q psy10795        149 LNAIEGLNFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWIAGPT  228 (412)
Q Consensus       149 ~~ai~~l~~g~~~KV~l~f~~~fW~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~w~~~~~~~~~~~~~~~vL~~~~~g~~  228 (412)
                      .++|++++|+++.||+|.|+++||+.+...++++.+....   .       ...+.  +++.   . +..+|++|++|..
T Consensus       648 ~~AI~~l~~g~v~KV~L~F~~~fW~~~~~~fG~l~~~~~~---~-------~~l~~--~~~~---~-~~pvLl~~v~G~~  711 (852)
T 2xag_A          648 TSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTAS---R-------GELFL--FWNL---Y-KAPILLALVAGEA  711 (852)
T ss_dssp             HHHHHHSEECCCEEEEEECSSCCSCTTCCEEEECCSSSTT---T-------TTTCE--EEEC---S-SSSEEEEEECHHH
T ss_pred             HHHHHcCCccceEEEEEEcCCcccCCCCCeeeeeccccCC---C-------CceEE--EecC---C-CCCEEEEEecCcC
Confidence            9999999999999999999999998765666655322211   0       11111  1211   1 2358899999999


Q ss_pred             hHHHhcCCHHHHHHHHHHHHHHHhCCCCCCCCCcEEEeecCCCCCCCccccCCCCCccccccccCcccccCCCCCCCCCc
Q psy10795        229 ARYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLC  308 (412)
Q Consensus       229 a~~~~~lsdeel~~~~l~~L~~~~g~~~~~~~~~~~~~~~W~~dp~~~G~ys~~~pg~~~~~~~~~~~~~~~~~~~~p~~  308 (412)
                      +..+..++++++++.++++|+++||. ...+.|..+.+++|.+|||++|+|+++.||+.                     
T Consensus       712 a~~l~~lsdeel~~~~l~~L~~ifG~-~~~~~P~~~~vtrW~~dp~s~GsYs~~~pG~~---------------------  769 (852)
T 2xag_A          712 AGIMENISDDVIVGRCLAILKGIFGS-SAVPQPKETVVSRWRADPWARGSYSYVAAGSS---------------------  769 (852)
T ss_dssp             HHHGGGSCHHHHHHHHHHHHHHHHCT-TTCCCCSEEEECCTTTCTTTSSSCEECBTTCC---------------------
T ss_pred             HHHHhcCCHHHHHHHHHHHHHHHhCc-cccCCceEEEEEecCCCCCcCccccccCCCcc---------------------
Confidence            99999999999999999999999985 23568999999999999999999999876642                     


Q ss_pred             cccccCCCccCCCCccCcchHHhcccccc-------CCCCceEEEecccccCcCcccchhhhhccHHHHHHHHHHHHhcc
Q psy10795        309 RRSYQPTSLRNGSDRLNTSAADLAAPVIN-------REGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVYLRREG  381 (412)
Q Consensus       309 ~~~~~~~g~~~~~~~~~~~~~~l~~p~~~-------~~~~~~l~fAGe~t~~~~~g~~eGA~~SG~raA~~i~~~l~~~~  381 (412)
                                      ..+++.|++|+.+       .+..+|||||||||+..|+||||||++||+|||++|++.+....
T Consensus       770 ----------------~~~~~~L~~P~~~~~~~p~~~~~~grL~FAGE~Ts~~~~gtveGAi~SG~RAA~~Il~~l~~~~  833 (852)
T 2xag_A          770 ----------------GNDYDLMAQPITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFLGAM  833 (852)
T ss_dssp             ----------------TTHHHHTTSCBCCCCSSTTCCCCCCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHHHHHCCG
T ss_pred             ----------------hhhHHHHhCccccccccccccCCCCcEEEEehhHhCCCCcCHHHHHHHHHHHHHHHHHHhhCCC
Confidence                            1345677777642       12336999999999998999999999999999999999987643


Q ss_pred             h
Q psy10795        382 F  382 (412)
Q Consensus       382 ~  382 (412)
                      .
T Consensus       834 ~  834 (852)
T 2xag_A          834 Y  834 (852)
T ss_dssp             G
T ss_pred             C
Confidence            3

>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*

Probab=100.00  E-value=1.7e-34  Score=297.96  Aligned_cols=260  Identities=23%  Similarity=0.336  Sum_probs=185.1

Q ss_pred             eeecCCcCCCCCCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChhhhhcC---------cccccCCCcHHH
Q psy10795         78 LLVSGQTPVDLSNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSK---------LITFVPSLPAQK  148 (412)
Q Consensus        78 l~~~~~~~~~~~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~~L~~~---------~i~f~P~Lp~~k  148 (412)
                      +..++++.+. +.+|++|++|++|.+.++++|.|++.+|++++||+||+|+|+++|+..         .|.|.|+||+.+
T Consensus       204 l~~~l~~~l~-~~~i~~~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~p~~~l~~~~~~~~~~~~~i~f~P~Lp~~~  282 (516)
T 1rsg_A          204 VVQRIAQSFP-QNWLKLSCEVKSITREPSKNVTVNCEDGTVYNADYVIITVPQSVLNLSVQPEKNLRGRIEFQPPLKPVI  282 (516)
T ss_dssp             HHHHHHTTSC-GGGEETTCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCCHHHHHGGGSSCSCSTTCCEEESCCCHHH
T ss_pred             HHHHHHHhCC-CCEEEECCEEEEEEEcCCCeEEEEECCCcEEECCEEEECCCHHHhhhccccccccccceEecCCCCHHH
Confidence            3334445442 357999999999998226779999999989999999999999999853         479999999999


Q ss_pred             HHHHhcCCCcceeEEEEEcCCCccCCCCCceeEeecCCC-ccc-ccccc---------------ccCCCCCcccc--ccc
Q psy10795        149 LNAIEGLNFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQD-KMD-LFKDM---------------VHVDGKPWVWG--ILG  209 (412)
Q Consensus       149 ~~ai~~l~~g~~~KV~l~f~~~fW~~~~~~~~~~~~~~~-~~~-~~g~~---------------~~~~~~~w~~~--~~~  209 (412)
                      .++|++++|++..||+|.|+++||+++...+..+.+.++ +.. +.+..               .......|...  +.+
T Consensus       283 ~~ai~~~~~~~~~Kv~l~f~~~fW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  362 (516)
T 1rsg_A          283 QDAFDKIHFGALGKVIFEFEECCWSNESSKIVTLANSTNEFVEIVRNAENLDELDSMLEREDSQKHTSVTCWSQPLFFVN  362 (516)
T ss_dssp             HHHTTSSCCCCCEEEEEEESSCCSCCSCSEEEECCCCCHHHHHHHHHCCSHHHHHHHC---------CCCTTSSCEEEEE
T ss_pred             HHHHHhCCCCcceEEEEEeCCCCCCCCCCcEEEeCCCCccchhhcccCcccchhhhcccccccccccccccccCceeEEE
Confidence            999999999999999999999999876445544322111 100 00000               00000234321  112


Q ss_pred             eeecCCCCcEEEEEecccchHHHhcC--CHHHHHHH---HHHHHHHHhCC-----CCCCC-------CCc--EEEeecCC
Q psy10795        210 FYMDAEDPLTLLGWIAGPTARYMETL--PMAVLQAD---IMRLFRHFLGG-----AYIIP-------EPI--RIVRSAWS  270 (412)
Q Consensus       210 ~~~~~~~~~vL~~~~~g~~a~~~~~l--sdeel~~~---~l~~L~~~~g~-----~~~~~-------~~~--~~~~~~W~  270 (412)
                      +.... +.++|++|+.|+.|..++.+  +++++.+.   +++.|.++||.     +...+       .|.  .+.+++|.
T Consensus       363 ~~~~~-~~~~L~~~~~g~~a~~~~~l~~~~~~~~~~~~~~l~~l~~~~g~~~~~~~~~~~~~~~~a~~p~~~~~~~~~W~  441 (516)
T 1rsg_A          363 LSKST-GVASFMMLMQAPLTNHIESIREDKERLFSFFQPVLNKIMKCLDSEDVIDGMRPIENIANANKPVLRNIIVSNWT  441 (516)
T ss_dssp             HHHHT-SCSEEEEEECBTHHHHHHHTTTCHHHHHHHHHHHHHHHHHHTTCCCCEECCC-------CCSCEEEEEEECCTT
T ss_pred             eeecC-CCcEEEEEecchHHHHHHhcCCCHHHHHHHHHHHHHHHHhhccccccccCCCCcccccccCCCccceEEEecCC
Confidence            22222 34588999999999999998  99998765   55566666652     11111       244  89999999


Q ss_pred             CCCCCccccCCCCCccccccccCcccccCCCCCCCCCccccccCCCccCCCCccCcchHHhccccccCCCCceEEEeccc
Q psy10795        271 INPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLNTSAADLAAPVINREGRPVLLFAGEA  350 (412)
Q Consensus       271 ~dp~~~G~ys~~~pg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~~~~l~~p~~~~~~~~~l~fAGe~  350 (412)
                      +|||++|+|+++.||+.                           .         ......|+.+..     +||||||||
T Consensus       442 ~dp~~~Gsys~~~~g~~---------------------------~---------~~~~~~l~~~~~-----~rl~FAGe~  480 (516)
T 1rsg_A          442 RDPYSRGAYSACFPGDD---------------------------P---------VDMVVAMSNGQD-----SRIRFAGEH  480 (516)
T ss_dssp             TCTTTTTCCCCCBC----------------------------------------CHHHHHHHHCSS-----SSEEECSTT
T ss_pred             CCCCCCccCCCcCCCCC---------------------------H---------HHHHHHhccCCC-----CcEEEeccc
Confidence            99999999999877642                           0         023455654332     499999999


Q ss_pred             ccCcCcccchhhhhccHHHHHHHHHHHHhc
Q psy10795        351 TSPHHYGTVNGAVESGARETANAIVYLRRE  380 (412)
Q Consensus       351 t~~~~~g~~eGA~~SG~raA~~i~~~l~~~  380 (412)
                      |+..++||||||++||+|||++|++.++..
T Consensus       481 ts~~~~g~v~GA~~SG~raA~~i~~~~~~~  510 (516)
T 1rsg_A          481 TIMDGAGCAYGAWESGRREATRISDLLKLE  510 (516)
T ss_dssp             SCSTTBTSHHHHHHHHHHHHHHHHHHHHGG
T ss_pred             cccCCCccchhHHHHHHHHHHHHHHHhhhh
Confidence            999999999999999999999999987754

>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*

Probab=100.00  E-value=3.2e-34  Score=307.18  Aligned_cols=230  Identities=27%  Similarity=0.422  Sum_probs=189.1

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChhhhhcCcccccCCCcHHHHHHHhcCCCcceeEEEEEcC
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNAIEGLNFGTVDKIFIRFP  168 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~~L~~~~i~f~P~Lp~~k~~ai~~l~~g~~~KV~l~f~  168 (412)
                      +.+|++|++|++|++ ++++|+|++.+|+++.||+||+|+|+++|++..|.|.|+||+.+.++|++++|+++.||+|.|+
T Consensus       543 gl~I~l~t~V~~I~~-~~~~v~V~~~~G~~i~Ad~VIvA~P~~vL~~~~i~f~P~Lp~~~~~ai~~l~~g~~~KV~l~f~  621 (776)
T 4gut_A          543 GLDIQLKSPVQCIDY-SGDEVQVTTTDGTGYSAQKVLVTVPLALLQKGAIQFNPPLSEKKMKAINSLGAGIIEKIALQFP  621 (776)
T ss_dssp             TSCEESSCCEEEEEC-SSSSEEEEETTCCEEEESEEEECCCHHHHHTTCSEEESCCCHHHHHHHHHEEEECCEEEEEECS
T ss_pred             CCcEEcCCeeEEEEE-cCCEEEEEECCCcEEEcCEEEECCCHHHHhhcccccCCCCCHHHHHHHHhCCCeeEEEEEEecC
Confidence            347999999999999 8889999999998999999999999999998778999999999999999999999999999999


Q ss_pred             CCccCCCC---CceeEeecCCCccccccccccCCCCCccccccceeecCCCCcEEEEEecccchHHHhcCCHHHHHHHHH
Q psy10795        169 AKWWKDGC---QGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWIAGPTARYMETLPMAVLQADIM  245 (412)
Q Consensus       169 ~~fW~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~w~~~~~~~~~~~~~~~vL~~~~~g~~a~~~~~lsdeel~~~~l  245 (412)
                      ++||+++.   ..++.+....+            ...+....++..+ .+...+|++|++|+.+..+..++++|+++.++
T Consensus       622 ~~FW~~~~~g~~~fG~l~~~~~------------~~~~~~~~~d~~p-~g~~~vL~~~i~G~~a~~l~~lsdeel~~~~l  688 (776)
T 4gut_A          622 YRFWDSKVQGADFFGHVPPSAS------------KRGLFAVFYDMDP-QKKHSVLMSVIAGEAVASVRTLDDKQVLQQCM  688 (776)
T ss_dssp             SCTTHHHHTTCSEEEECCSSGG------------GTTEEEEEEESCT-TSCSCEEEEEECTHHHHHHHTSCHHHHHHHHH
T ss_pred             cccccccCCCCceEEeecCCcC------------CCceEEEEecCCC-CCCceEEEEEecchhHHHHHcCCHHHHHHHHH
Confidence            99998632   23333311111            1112221222222 22346899999999999999999999999999


Q ss_pred             HHHHHHhCCCCCCCCCcEEEeecCCCCCCCccccCCCCCccccccccCcccccCCCCCCCCCccccccCCCccCCCCccC
Q psy10795        246 RLFRHFLGGAYIIPEPIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLN  325 (412)
Q Consensus       246 ~~L~~~~g~~~~~~~~~~~~~~~W~~dp~~~G~ys~~~pg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~  325 (412)
                      ++|+++||. ...+.|..+.+++|.+|||++|+|+++.||+.                                     .
T Consensus       689 ~~L~~ifg~-~~~~~P~~~~vt~W~~dp~s~Gsys~~~~g~~-------------------------------------~  730 (776)
T 4gut_A          689 ATLRELFKE-QEVPDPTKYFVTRWSTDPWIQMAYSFVKTGGS-------------------------------------G  730 (776)
T ss_dssp             HHHHHHTTT-SCCCCCSEEEECCGGGCTTTCCSEEEEBTTCC-------------------------------------T
T ss_pred             HHHHHHhCc-ccccCcceEEEecCCCCCccCCCCCccCCCCc-------------------------------------h
Confidence            999999994 34678999999999999999999999865531                                     1


Q ss_pred             cchHHhccccccCCCCceEEEecccccCcCcccchhhhhccHHHHHHHHH
Q psy10795        326 TSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIV  375 (412)
Q Consensus       326 ~~~~~l~~p~~~~~~~~~l~fAGe~t~~~~~g~~eGA~~SG~raA~~i~~  375 (412)
                      ..+..|++|+.     +|||||||||+..++||||||++||+|||++|++
T Consensus       731 ~~~~~L~~p~~-----grL~FAGE~Ts~~~~gtveGAi~SG~RaA~~Ila  775 (776)
T 4gut_A          731 EAYDIIAEDIQ-----GTVFFAGEATNRHFPQTVTGAYLSGVREASKIAA  775 (776)
T ss_dssp             HHHHHHHCCBT-----TTEEECSGGGCSSSCSSHHHHHHHHHHHHHHHHC
T ss_pred             hHHHHHhCcCC-----CcEEEEehhhcCCCCcCHHHHHHHHHHHHHHHHh
Confidence            34678888875     3899999999999999999999999999999974

>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*

Probab=99.98  E-value=2e-31  Score=271.87  Aligned_cols=237  Identities=28%  Similarity=0.461  Sum_probs=189.1

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChhhhhcCcccccCCCcHHHHHHHhcCCCcceeEEEEEcC
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNAIEGLNFGTVDKIFIRFP  168 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~~L~~~~i~f~P~Lp~~k~~ai~~l~~g~~~KV~l~f~  168 (412)
                      +.+|++|++|++|.+ .+++|+|++.+|++++||+||+|+|+.+|+..++.|.|+||+.+.++|++++|+++.||+|.|+
T Consensus       228 ~~~i~~~~~V~~i~~-~~~~v~v~~~~g~~~~ad~vI~a~~~~~l~~~~~~~~p~Lp~~~~~ai~~~~~~~~~kv~l~~~  306 (472)
T 1b37_A          228 DPRLQLNKVVREIKY-SPGGVTVKTEDNSVYSADYVMVSASLGVLQSDLIQFKPKLPTWKVRAIYQFDMAVYTKIFLKFP  306 (472)
T ss_dssp             CTTEESSCCEEEEEE-CSSCEEEEETTSCEEEESEEEECSCHHHHHTTSSEEESCCCHHHHHHHHHSEEECEEEEEEECS
T ss_pred             ccEEEcCCEEEEEEE-cCCcEEEEECCCCEEEcCEEEEecCHHHhccCCeeECCCCCHHHHHHHHhcCCcceeEEEEECC
Confidence            468999999999999 8888999999999999999999999999998767899999999999999999999999999999


Q ss_pred             CCccCCCCCceeE-eecCCCccccccccccCCCCCccccccceeecCCCCcEEEEEecccchHHHhcCCHHHHHHHHHHH
Q psy10795        169 AKWWKDGCQGFNF-YWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWIAGPTARYMETLPMAVLQADIMRL  247 (412)
Q Consensus       169 ~~fW~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~w~~~~~~~~~~~~~~~vL~~~~~g~~a~~~~~lsdeel~~~~l~~  247 (412)
                      ++||+.. .+..+ +..+.+.    +.     ...|..  ++.. .+ +..+|++++.++.++.+..++++++.+.++++
T Consensus       307 ~~~w~~~-~~~~~~~~~~~~~----~~-----~~~~~~--~~~~-~p-~~~~l~~~~~~~~a~~~~~~~~~e~~~~~l~~  372 (472)
T 1b37_A          307 RKFWPEG-KGREFFLYASSRR----GY-----YGVWQE--FEKQ-YP-DANVLLVTVTDEESRRIEQQSDEQTKAEIMQV  372 (472)
T ss_dssp             SCCSCCS-TTCSEEEECCSST----TS-----SCEEEE--CTTT-ST-TCCEEEEEEEHHHHHHHHTSCHHHHHHHHHHH
T ss_pred             CcCCCCC-CCcceEEecccCC----cc-----ceeeec--ccCC-CC-CCCEEEEEechHHHHHHHhCCHHHHHHHHHHH
Confidence            9999863 22222 2122110    00     112321  1111 12 34578888887777788899999999999999


Q ss_pred             HHHHhCCCCCCCCCcEEEeecCCCCCCCccccCCCCCccccccccCcccccCCCCCCCCCccccccCCCccCCCCccCcc
Q psy10795        248 FRHFLGGAYIIPEPIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLNTS  327 (412)
Q Consensus       248 L~~~~g~~~~~~~~~~~~~~~W~~dp~~~G~ys~~~pg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~  327 (412)
                      |+++||. ...+.|..+.+++|..|||++|+|+++.||+.                                     ...
T Consensus       373 L~~~~Pg-~~~~~~~~~~~~~W~~~~~~~G~~~~~~~g~~-------------------------------------~~~  414 (472)
T 1b37_A          373 LRKMFPG-KDVPDATDILVPRWWSDRFYKGTFSNWPVGVN-------------------------------------RYE  414 (472)
T ss_dssp             HHHHCTT-SCCCCCSEEECCCTTTCTTTSSSEEECBTTCC-------------------------------------HHH
T ss_pred             HHHHcCC-CCCCCCceEEecccCCCCCCCcccCCCCCCCC-------------------------------------hhH
Confidence            9999963 24567888889999999999999998755531                                     023


Q ss_pred             hHHhccccccCCCCceEEEecccccCcCcccchhhhhccHHHHHHHHHHHHhcchhh
Q psy10795        328 AADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVYLRREGFFE  384 (412)
Q Consensus       328 ~~~l~~p~~~~~~~~~l~fAGe~t~~~~~g~~eGA~~SG~raA~~i~~~l~~~~~~~  384 (412)
                      ++.+++|++      +||||||+|+..++|+||||++||+|||++|++.+..+....
T Consensus       415 ~~~l~~p~~------~l~fAG~~t~~~~~g~v~GA~~SG~~aA~~i~~~l~~~~~~~  465 (472)
T 1b37_A          415 YDQLRAPVG------RVYFTGEHTSEHYNGYVHGAYLSGIDSAEILINCAQKKMCKY  465 (472)
T ss_dssp             HHHHHCCBT------TEEECSGGGCTTTTTSHHHHHHHHHHHHHHHHHHHHHCCC--
T ss_pred             HHHHhccCC------cEEEeecccCCCCCCchhHHHHHHHHHHHHHHHHHHhCcCCC
Confidence            567889985      899999999998889999999999999999999998766544

>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...

Probab=99.97  E-value=9.5e-31  Score=270.04  Aligned_cols=230  Identities=21%  Similarity=0.332  Sum_probs=185.4

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChhhhhcCcccccCCCcHHHHHHHhcCCCcceeEEEEEcC
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNAIEGLNFGTVDKIFIRFP  168 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~~L~~~~i~f~P~Lp~~k~~ai~~l~~g~~~KV~l~f~  168 (412)
                      +.+|++|++|++|.+ ++++|+|++.+|+++.||+||+|+|+.++++  +.|+|+||+.+.+++++++|+++.||++.|+
T Consensus       226 g~~i~~~~~V~~i~~-~~~~v~v~~~~g~~~~ad~VI~a~p~~~l~~--l~~~p~lp~~~~~~i~~~~~~~~~kv~l~~~  302 (520)
T 1s3e_A          226 GDRVKLERPVIYIDQ-TRENVLVETLNHEMYEAKYVISAIPPTLGMK--IHFNPPLPMMRNQMITRVPLGSVIKCIVYYK  302 (520)
T ss_dssp             GGGEESSCCEEEEEC-SSSSEEEEETTSCEEEESEEEECSCGGGGGG--SEEESCCCHHHHHHTTSCCBCCEEEEEEECS
T ss_pred             CCcEEcCCeeEEEEE-CCCeEEEEECCCeEEEeCEEEECCCHHHHcc--eeeCCCCCHHHHHHHHhCCCcceEEEEEEeC
Confidence            568999999999998 7888999999999999999999999999988  6799999999999999999999999999999


Q ss_pred             CCccCCCCCce-eEeecCCCccccccccccCCCCCccccccceeecCCCCcEEEEEecccchHHHhcCCHHHHHHHHHHH
Q psy10795        169 AKWWKDGCQGF-NFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWIAGPTARYMETLPMAVLQADIMRL  247 (412)
Q Consensus       169 ~~fW~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~w~~~~~~~~~~~~~~~vL~~~~~g~~a~~~~~lsdeel~~~~l~~  247 (412)
                      ++||+..  ++ +.+....+             ..+...+++.+..+++..+|++|+.+..++.+..++++++.+.++++
T Consensus       303 ~~~w~~~--~~~g~~~~~~~-------------~~~~~~~~d~~~~~~~~~~l~~~~~~~~a~~~~~~~~~e~~~~vl~~  367 (520)
T 1s3e_A          303 EPFWRKK--DYCGTMIIDGE-------------EAPVAYTLDDTKPEGNYAAIMGFILAHKARKLARLTKEERLKKLCEL  367 (520)
T ss_dssp             SCGGGGG--TEEEEEEECST-------------TCSCSEEEECCCTTSCSCEEEEEEETHHHHHHTTSCHHHHHHHHHHH
T ss_pred             CCcccCC--CCCceeeccCC-------------CCceEEEeeCCCCCCCCCEEEEEccchhhhhhhcCCHHHHHHHHHHH
Confidence            9999753  22 22211111             01111123322223334689999999888889999999999999999


Q ss_pred             HHHHhCCCCCCCCCcEEEeecCCCCCCCccccC-CCCCccccccccCcccccCCCCCCCCCccccccCCCccCCCCccCc
Q psy10795        248 FRHFLGGAYIIPEPIRIVRSAWSINPHFRGSYS-HHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLNT  326 (412)
Q Consensus       248 L~~~~g~~~~~~~~~~~~~~~W~~dp~~~G~ys-~~~pg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~  326 (412)
                      |+++||. .....|..+..++|.+|||++|+|+ ++.||+.                                     ..
T Consensus       368 L~~~~~~-~~~~~p~~~~~~~W~~~~~~~G~~~~~~~~g~~-------------------------------------~~  409 (520)
T 1s3e_A          368 YAKVLGS-LEALEPVHYEEKNWCEEQYSGGCYTTYFPPGIL-------------------------------------TQ  409 (520)
T ss_dssp             HHHHHTC-GGGGCCSEEEEEEGGGCTTTCSSSCBCCCTTHH-------------------------------------HH
T ss_pred             HHHHhCc-cccCCccEEEEEeeCCCCCCCCCCccccCCCcc-------------------------------------cc
Confidence            9999984 2245788999999999999999998 6655542                                     01


Q ss_pred             chHHhccccccCCCCceEEEecccccCcCcccchhhhhccHHHHHHHHHHHHhc
Q psy10795        327 SAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVYLRRE  380 (412)
Q Consensus       327 ~~~~l~~p~~~~~~~~~l~fAGe~t~~~~~g~~eGA~~SG~raA~~i~~~l~~~  380 (412)
                      ..+.+++|++      +||||||+|+..++|+||||++||+|||++|++.+...
T Consensus       410 ~~~~l~~p~~------~L~fAG~~t~~~~~g~v~GAi~SG~~aA~~i~~~l~~~  457 (520)
T 1s3e_A          410 YGRVLRQPVD------RIYFAGTETATHWSGYMEGAVEAGERAAREILHAMGKI  457 (520)
T ss_dssp             HGGGTTCCBT------TEEECSGGGCSSSTTSHHHHHHHHHHHHHHHHHHTTSS
T ss_pred             chHHHhCCCC------CEEEeehhhcCcCcEEhHHHHHHHHHHHHHHHHHHhcC
Confidence            2345677875      89999999998889999999999999999999988654

>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*

Probab=99.97  E-value=8.6e-31  Score=268.68  Aligned_cols=237  Identities=19%  Similarity=0.252  Sum_probs=182.8

Q ss_pred             eeeecCCcCCCCCCcEEcCCeEEEEEecCCCcEEEEeCCCc----EEEeCEEEEeCChhhhhcCcccccCCCcHHHHHHH
Q psy10795         77 TLLVSGQTPVDLSNKILYKKEVNKIDWEYQNGAAVSCSDGS----VYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNAI  152 (412)
Q Consensus        77 vl~~~~~~~~~~~~~I~ln~~V~~I~~~~~~~V~V~~~~G~----~~~ad~VIvTvP~~~L~~~~i~f~P~Lp~~k~~ai  152 (412)
                      .+..++++.+  +.+|++|++|++|.+ ++++|.|++.+|+    +++||+||+|+|+.++..  |.|.|+||+.+.+++
T Consensus       242 ~l~~~l~~~l--~~~i~~~~~V~~I~~-~~~~v~v~~~~~~~~~~~~~ad~vI~t~p~~~~~~--i~f~p~Lp~~~~~ai  316 (498)
T 2iid_A          242 KLPTAMYRDI--QDKVHFNAQVIKIQQ-NDQKVTVVYETLSKETPSVTADYVIVCTTSRAVRL--IKFNPPLLPKKAHAL  316 (498)
T ss_dssp             HHHHHHHHHT--GGGEESSCEEEEEEE-CSSCEEEEEECSSSCCCEEEESEEEECSCHHHHTT--SEEESCCCHHHHHHH
T ss_pred             HHHHHHHHhc--ccccccCCEEEEEEE-CCCeEEEEEecCCcccceEEeCEEEECCChHHHhh--eecCCCCCHHHHHHH
Confidence            4444445444  337999999999999 7888999987764    589999999999999987  789999999999999


Q ss_pred             hcCCCcceeEEEEEcCCCccCCCC-CceeEeecCCCccccccccccCCCCCccccccceeecCCCCcEEEEEecccchHH
Q psy10795        153 EGLNFGTVDKIFIRFPAKWWKDGC-QGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWIAGPTARY  231 (412)
Q Consensus       153 ~~l~~g~~~KV~l~f~~~fW~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~w~~~~~~~~~~~~~~~vL~~~~~g~~a~~  231 (412)
                      ++++|++..||+|.|+++||+++. .+ +...++.             +..+..  +.....+.+.++|++|+.|+.+..
T Consensus       317 ~~l~~~~~~kv~l~~~~~~w~~~~~~~-~~~~~~~-------------~~~~~~--~~s~~~p~g~~~L~~~~~g~~a~~  380 (498)
T 2iid_A          317 RSVHYRSGTKIFLTCTTKFWEDDGIHG-GKSTTDL-------------PSRFIY--YPNHNFTNGVGVIIAYGIGDDANF  380 (498)
T ss_dssp             HHCCEECEEEEEEEESSCGGGGGTCCS-SEEEESS-------------TTCEEE--CCSSCCTTSCEEEEEEEEHHHHHT
T ss_pred             HhCCCcceeEEEEEeCCCCccCCCccC-CcccCCC-------------CcceEE--ECCCCCCCCCcEEEEEeCCccHhh
Confidence            999999999999999999997631 11 1111221             111111  111111334568889999988888


Q ss_pred             HhcCCHHHHHHHHHHHHHHHhCCCCCCCC----CcEEEeecCCCCCCCccccCCCCCccccccccCcccccCCCCCCCCC
Q psy10795        232 METLPMAVLQADIMRLFRHFLGGAYIIPE----PIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPL  307 (412)
Q Consensus       232 ~~~lsdeel~~~~l~~L~~~~g~~~~~~~----~~~~~~~~W~~dp~~~G~ys~~~pg~~~~~~~~~~~~~~~~~~~~p~  307 (412)
                      +..++++++.+.++++|+++||.  ..+.    +....+++|..|||++|+|++..|++.                    
T Consensus       381 ~~~~~~~~~~~~~l~~L~~~~g~--~~~~~~~~~~~~~~~~W~~~p~~~G~~~~~~~~~~--------------------  438 (498)
T 2iid_A          381 FQALDFKDCADIVFNDLSLIHQL--PKKDIQSFCYPSVIQKWSLDKYAMGGITTFTPYQF--------------------  438 (498)
T ss_dssp             TTTSCHHHHHHHHHHHHHHHHTC--CHHHHHHHEEEEEEEEGGGCTTTCSSEECCCTTHH--------------------
T ss_pred             hhcCCHHHHHHHHHHHHHHHcCC--ChhhhhhhcCccEEEecCCCCCCCceeeecCCcch--------------------
Confidence            88999999999999999999983  1111    124678999999999999998876652                    


Q ss_pred             ccccccCCCccCCCCccCcchHHhccccccCCCCceEEEecccccCcCcccchhhhhccHHHHHHHHHHHHhc
Q psy10795        308 CRRSYQPTSLRNGSDRLNTSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVYLRRE  380 (412)
Q Consensus       308 ~~~~~~~~g~~~~~~~~~~~~~~l~~p~~~~~~~~~l~fAGe~t~~~~~g~~eGA~~SG~raA~~i~~~l~~~  380 (412)
                                       ......+.+|.+      +||||||+|+..+ |+|+||++||+|||++|++.+...
T Consensus       439 -----------------~~~~~~l~~p~~------~l~fAGe~t~~~~-g~~~GAi~SG~raA~~i~~~l~~~  487 (498)
T 2iid_A          439 -----------------QHFSDPLTASQG------RIYFAGEYTAQAH-GWIDSTIKSGLRAARDVNLASENP  487 (498)
T ss_dssp             -----------------HHHHHHHHCCBT------TEEECSGGGSSSS-SCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             -----------------HHHHHHHhCCCC------cEEEEEcccccCC-cCHHHHHHHHHHHHHHHHHHhcCC
Confidence                             124567788875      8999999998754 999999999999999999988643

>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*

Probab=99.97  E-value=7.2e-30  Score=256.75  Aligned_cols=207  Identities=20%  Similarity=0.301  Sum_probs=166.3

Q ss_pred             cEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChhhhhcCcccccCCCcHHHHHHHhcCCCcceeEEEEEcCCC
Q psy10795         91 KILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNAIEGLNFGTVDKIFIRFPAK  170 (412)
Q Consensus        91 ~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~~L~~~~i~f~P~Lp~~k~~ai~~l~~g~~~KV~l~f~~~  170 (412)
                      +|++|++|++|++ ++++|+|++.+|++++||+||+|+|+++|+.  |.|.|+||..+.++++.+.++..+||.+.|+++
T Consensus       219 ~i~~~~~V~~i~~-~~~~v~v~~~~g~~~~ad~vi~a~~~~~l~~--i~~~p~l~~~~~~~~~~~~~~~~~kv~~~~~~~  295 (431)
T 3k7m_X          219 EIRLQTVVTGIDQ-SGDVVNVTVKDGHAFQAHSVIVATPMNTWRR--IVFTPALPERRRSVIEEGHGGQGLKILIHVRGA  295 (431)
T ss_dssp             CEESSCCEEEEEC-SSSSEEEEETTSCCEEEEEEEECSCGGGGGG--SEEESCCCHHHHHHHHHCCCCCEEEEEEEEESC
T ss_pred             ceEeCCEEEEEEE-cCCeEEEEECCCCEEEeCEEEEecCcchHhh--eeeCCCCCHHHHHHHHhCCCcceEEEEEEECCC
Confidence            8999999999998 8888999999998899999999999999998  689999999999999999999999999999999


Q ss_pred             ccCCCCCceeEeecCCCccccccccccCCCCCccccccceeecCCCCcEEEEEecccchHHHhcCCHHHHHHHHHHHHHH
Q psy10795        171 WWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWIAGPTARYMETLPMAVLQADIMRLFRH  250 (412)
Q Consensus       171 fW~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~w~~~~~~~~~~~~~~~vL~~~~~g~~a~~~~~lsdeel~~~~l~~L~~  250 (412)
                      ||     ++... .+.                +...++++.....+..+|++|+.|+.   +...+.+    .+.+.|++
T Consensus       296 ~~-----~i~~~-~d~----------------~~~~~~~~~~~~~~~~~l~~~~~g~~---~~~~~~~----~~~~~l~~  346 (431)
T 3k7m_X          296 EA-----GIECV-GDG----------------IFPTLYDYCEVSESERLLVAFTDSGS---FDPTDIG----AVKDAVLY  346 (431)
T ss_dssp             CT-----TEEEE-BSS----------------SSSEEEEEEECSSSEEEEEEEEETTT---CCTTCHH----HHHHHHHH
T ss_pred             Cc-----CceEc-CCC----------------CEEEEEeCcCCCCCCeEEEEEecccc---CCCCCHH----HHHHHHHH
Confidence            74     22111 111                11122344333234568889988765   3333332    45667888


Q ss_pred             HhCCCCCCCCCcEEEeecCCCCCCCccccCCCCCccccccccCcccccCCCCCCCCCccccccCCCccCCCCccCcchHH
Q psy10795        251 FLGGAYIIPEPIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLNTSAAD  330 (412)
Q Consensus       251 ~~g~~~~~~~~~~~~~~~W~~dp~~~G~ys~~~pg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~~~~  330 (412)
                      +++.   . .|..+..++|..|||++|+|+++.||+.                                     ..+++.
T Consensus       347 ~~~~---~-~~~~~~~~~W~~d~~~~G~~~~~~~g~~-------------------------------------~~~~~~  385 (431)
T 3k7m_X          347 YLPE---V-EVLGIDYHDWIADPLFEGPWVAPRVGQF-------------------------------------SRVHKE  385 (431)
T ss_dssp             HCTT---C-EEEEEECCCTTTCTTTSSSSCCCCTTTT-------------------------------------TTSSGG
T ss_pred             hcCC---C-CccEeEecccCCCCCCCCCCCCcCCCCC-------------------------------------cccHHH
Confidence            8873   3 3888899999999999999999977752                                     134578


Q ss_pred             hccccccCCCCceEEEecccccCcCcccchhhhhccHHHHHHHHHH
Q psy10795        331 LAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVY  376 (412)
Q Consensus       331 l~~p~~~~~~~~~l~fAGe~t~~~~~g~~eGA~~SG~raA~~i~~~  376 (412)
                      |++|.+      |||||||+|+..++||||||++||+|||++|+..
T Consensus       386 l~~p~g------~~~fAGe~t~~~~~g~~~GA~~sg~raa~~i~~~  425 (431)
T 3k7m_X          386 LGEPAG------RIHFVGSDVSLEFPGYIEGALETAECAVNAILHS  425 (431)
T ss_dssp             GGSCBT------TEEECSGGGCSSSTTSHHHHHHHHHHHHHHHHHC
T ss_pred             HhCCCC------cEEEEehhhhccCCeEehHHHHHHHHHHHHHHhh
Confidence            899985      8999999999999999999999999999999864

>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*

Probab=99.97  E-value=3.2e-30  Score=261.15  Aligned_cols=223  Identities=21%  Similarity=0.370  Sum_probs=178.0

Q ss_pred             CCcEEcCCeEEEEEecCCCc-EEEEeCCCcEEEeCEEEEeCChhhhhcCcccccCCCcHHHHHHHhcCCCcceeEEEEEc
Q psy10795         89 SNKILYKKEVNKIDWEYQNG-AAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNAIEGLNFGTVDKIFIRF  167 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~-V~V~~~~G~~~~ad~VIvTvP~~~L~~~~i~f~P~Lp~~k~~ai~~l~~g~~~KV~l~f  167 (412)
                      +.+|++|++|++|.. ++++ |.|++ +|+++.||+||+|+|+.++++  +.|.|+||+.+.+++++++|+++.||++.|
T Consensus       226 g~~i~~~~~V~~i~~-~~~~~v~v~~-~~~~~~ad~VI~a~p~~~~~~--l~~~p~lp~~~~~~i~~~~~~~~~kv~l~~  301 (453)
T 2yg5_A          226 GDDVFLNAPVRTVKW-NESGATVLAD-GDIRVEASRVILAVPPNLYSR--ISYDPPLPRRQHQMHQHQSLGLVIKVHAVY  301 (453)
T ss_dssp             GGGEECSCCEEEEEE-ETTEEEEEET-TTEEEEEEEEEECSCGGGGGG--SEEESCCCHHHHHHGGGEEECCEEEEEEEE
T ss_pred             CCcEEcCCceEEEEE-eCCceEEEEE-CCeEEEcCEEEEcCCHHHHhc--CEeCCCCCHHHHHHHhcCCCcceEEEEEEE
Confidence            568999999999998 7777 88887 677899999999999999988  678999999999999999999999999999


Q ss_pred             CCCccCCCCCce-eEeecCCCccccccccccCCCCCccccccceeecCCCCcEEEEEecccchHHHhcCCHHHHHHHHHH
Q psy10795        168 PAKWWKDGCQGF-NFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWIAGPTARYMETLPMAVLQADIMR  246 (412)
Q Consensus       168 ~~~fW~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~w~~~~~~~~~~~~~~~vL~~~~~g~~a~~~~~lsdeel~~~~l~  246 (412)
                      +++||+..  ++ +.+.....            +..+   +++.+..++...+|++|+.++.++.+..++++++.+.+++
T Consensus       302 ~~~~w~~~--~~~g~~~~~~~------------~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~  364 (453)
T 2yg5_A          302 ETPFWRED--GLSGTGFGASE------------VVQE---VYDNTNHEDDRGTLVAFVSDEKADAMFELSAEERKATILA  364 (453)
T ss_dssp             SSCGGGGG--TEEEEEECTTS------------SSCE---EEECCCTTCSSEEEEEEEEHHHHHHHHHSCHHHHHHHHHH
T ss_pred             CCCCCCCC--CCCceeecCCC------------CeEE---EEeCCCCCCCCCEEEEEeccHHHHHHhcCCHHHHHHHHHH
Confidence            99999753  22 12211111            1111   1222222223468889998888888989999999999999


Q ss_pred             HHHHHhCCCCCCCCCcEEEeecCCCCCCCccccC-CCCCccccccccCcccccCCCCCCCCCccccccCCCccCCCCccC
Q psy10795        247 LFRHFLGGAYIIPEPIRIVRSAWSINPHFRGSYS-HHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLN  325 (412)
Q Consensus       247 ~L~~~~g~~~~~~~~~~~~~~~W~~dp~~~G~ys-~~~pg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~  325 (412)
                      +|+++||.  ....|..+..++|.++||++|+|+ ++.||+.                                     .
T Consensus       365 ~L~~~~~~--~~~~p~~~~~~~W~~~~~~~G~~~~~~~~g~~-------------------------------------~  405 (453)
T 2yg5_A          365 SLARYLGP--KAEEPVVYYESDWGSEEWTRGCYAASFDLGGL-------------------------------------H  405 (453)
T ss_dssp             HHHHHHCG--GGGCCSEEEECCTTTCTTTCSSSCEEECTTHH-------------------------------------H
T ss_pred             HHHHHhCc--cCCCccEEEEeecCCCCCCCCCCcCcCCCCcc-------------------------------------c
Confidence            99999985  456788999999999999999986 4444431                                     0


Q ss_pred             cchHHhccccccCCCCceEEEecccccCcCcccchhhhhccHHHHHHHHHHH
Q psy10795        326 TSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVYL  377 (412)
Q Consensus       326 ~~~~~l~~p~~~~~~~~~l~fAGe~t~~~~~g~~eGA~~SG~raA~~i~~~l  377 (412)
                      ...+.+++|++      +||||||+|+..++|+||||++||++||++|++.+
T Consensus       406 ~~~~~~~~p~~------~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l  451 (453)
T 2yg5_A          406 RYGADSRTPVG------PIHFSCSDIAAEGYQHVDGAVRMGQRTAADIIARS  451 (453)
T ss_dssp             HHGGGTTCCBT------TEEECCGGGCSTTTTSHHHHHHHHHHHHHHHHHHC
T ss_pred             cchHHHhCCcC------ceEEeecccccccccchHHHHHHHHHHHHHHHHHh
Confidence            12235677774      89999999998889999999999999999999765

>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*

Probab=99.97  E-value=1.2e-29  Score=259.92  Aligned_cols=221  Identities=16%  Similarity=0.215  Sum_probs=175.0

Q ss_pred             CcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChhhhhcCcccccCCCcHHHHHHHhcCCCcceeEEEEEcCC
Q psy10795         90 NKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNAIEGLNFGTVDKIFIRFPA  169 (412)
Q Consensus        90 ~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~~L~~~~i~f~P~Lp~~k~~ai~~l~~g~~~KV~l~f~~  169 (412)
                      .+|++|++|++|.. .+++|.|++.+|++++||+||+|+|++++++  |.|.|+||+.+.++++.++|+++.||+|.|++
T Consensus       271 ~~i~~~~~V~~i~~-~~~~v~v~~~~g~~~~ad~vI~a~~~~~l~~--i~~~p~lp~~~~~ai~~~~~~~~~kv~l~~~~  347 (495)
T 2vvm_A          271 LGYVFGCPVRSVVN-ERDAARVTARDGREFVAKRVVCTIPLNVLST--IQFSPALSTERISAMQAGHVSMCTKVHAEVDN  347 (495)
T ss_dssp             EEEESSCCEEEEEE-CSSSEEEEETTCCEEEEEEEEECCCGGGGGG--SEEESCCCHHHHHHHHHCCCCCCEEEEEEESC
T ss_pred             eEEEeCCEEEEEEE-cCCEEEEEECCCCEEEcCEEEECCCHHHHhh--eeeCCCCCHHHHHHHHhcCCCceeEEEEEECC
Confidence            46999999999998 7788999999998999999999999999998  67999999999999999999999999999999


Q ss_pred             CccCCCCCceeEeecCCCccccccccccCCCCCccccccceeecCCCCcEEEEEecccchHHHhcCCHHHHHHHHHHHHH
Q psy10795        170 KWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWIAGPTARYMETLPMAVLQADIMRLFR  249 (412)
Q Consensus       170 ~fW~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~w~~~~~~~~~~~~~~~vL~~~~~g~~a~~~~~lsdeel~~~~l~~L~  249 (412)
                      ++|. .  ..++..++.             +..|   +++....++++.+|++|+. ..+.    ++++++.+.++++|+
T Consensus       348 ~~~~-~--~~g~~~~~~-------------~~~~---~~~~~~~~~~~~vl~~~~~-~~~~----~~~~e~~~~~~~~L~  403 (495)
T 2vvm_A          348 KDMR-S--WTGIAYPFN-------------KLCY---AIGDGTTPAGNTHLVCFGN-SANH----IQPDEDVRETLKAVG  403 (495)
T ss_dssp             GGGG-G--EEEEECSSC-------------SSCE---EEEEEECTTSCEEEEEEEC-STTC----CCTTTCHHHHHHHHH
T ss_pred             ccCC-C--ceeEecCCC-------------CcEE---EecCCCCCCCCeEEEEEeC-cccc----CCCHHHHHHHHHHHH
Confidence            9994 2  222221111             1112   1222223445568888764 3322    566677889999999


Q ss_pred             HHhCCCCCCCCCcEEEeecCCCCCCCccccCCCCCccccccccCcccccCCCCCCCCCccccccCCCccCCCCccCcchH
Q psy10795        250 HFLGGAYIIPEPIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLNTSAA  329 (412)
Q Consensus       250 ~~~g~~~~~~~~~~~~~~~W~~dp~~~G~ys~~~pg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~~~  329 (412)
                      ++++.   .+.|..+.+++|.+|||++|+|+++.||+.                                     ....+
T Consensus       404 ~~~~~---~~~~~~~~~~~W~~dp~~~g~y~~~~~g~~-------------------------------------~~~~~  443 (495)
T 2vvm_A          404 QLAPG---TFGVKRLVFHNWVKDEFAKGAWFFSRPGMV-------------------------------------SECLQ  443 (495)
T ss_dssp             TTSTT---SCCEEEEEECCTTTCTTTSSSSCCCCTTHH-------------------------------------HHHHH
T ss_pred             HhcCC---CCCceEEEEeEcCCCCCCCCCccCcCCCcc-------------------------------------hhhHH
Confidence            99873   457889999999999999999999876642                                     12366


Q ss_pred             HhccccccCCCCceEEEecccccCcCcccchhhhhccHHHHHHHHHHHHhcchh
Q psy10795        330 DLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVYLRREGFF  383 (412)
Q Consensus       330 ~l~~p~~~~~~~~~l~fAGe~t~~~~~g~~eGA~~SG~raA~~i~~~l~~~~~~  383 (412)
                      .+++|.+      +||||||+|+..++||||||++||+|||++|++.++....+
T Consensus       444 ~l~~p~~------~l~fAGe~t~~~~~g~veGAi~SG~raA~~i~~~l~~~~~~  491 (495)
T 2vvm_A          444 GLREKHG------GVVFANSDWALGWRSFIDGAIEEGTRAARVVLEELGTKREV  491 (495)
T ss_dssp             HHHCCBT------TEEECCGGGCSSSTTSHHHHHHHHHHHHHHHHHHHCCC---
T ss_pred             HHhCcCC------CEEEechhhhcCCceEEEhHHHHHHHHHHHHHHHhccccCC
Confidence            7888885      89999999998889999999999999999999988765544

>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*

Probab=99.95  E-value=6.3e-28  Score=246.81  Aligned_cols=244  Identities=16%  Similarity=0.195  Sum_probs=181.6

Q ss_pred             ccCCcceeeecCCcCCCCCCcEEcCCeEEEEEecCCCcEEEEeCCC---cEEEeCEEEEeCChhhhhcCcccccCCCcHH
Q psy10795         71 DAEDPLTLLVSGQTPVDLSNKILYKKEVNKIDWEYQNGAAVSCSDG---SVYTAYKIIITVPLGVLKSKLITFVPSLPAQ  147 (412)
Q Consensus        71 v~~~p~vl~~~~~~~~~~~~~I~ln~~V~~I~~~~~~~V~V~~~~G---~~~~ad~VIvTvP~~~L~~~~i~f~P~Lp~~  147 (412)
                      +.+....+..++++.+. .++|++|++|++|.+ .+++|+|++.+|   ++++||+||+|+|+.+|+.  +.|  +||+.
T Consensus       234 ~~gG~~~l~~~l~~~l~-~~~i~~~~~V~~i~~-~~~~v~v~~~~g~~~~~~~ad~vI~a~p~~~l~~--l~~--~l~~~  307 (489)
T 2jae_A          234 PVGGMDRIYYAFQDRIG-TDNIVFGAEVTSMKN-VSEGVTVEYTAGGSKKSITADYAICTIPPHLVGR--LQN--NLPGD  307 (489)
T ss_dssp             ETTCTTHHHHHHHHHHC-GGGEETTCEEEEEEE-ETTEEEEEEEETTEEEEEEESEEEECSCHHHHTT--SEE--CCCHH
T ss_pred             ecCCHHHHHHHHHHhcC-CCeEEECCEEEEEEE-cCCeEEEEEecCCeEEEEECCEEEECCCHHHHHh--Ccc--CCCHH
Confidence            33333445555555541 168999999999999 788999998876   6799999999999999988  455  68999


Q ss_pred             HHHHHhcCCCcceeEEEEEcCCCccCCCCCcee-EeecCCCccccccccccCCCCCccccccceeecCCCCcEEE-EEec
Q psy10795        148 KLNAIEGLNFGTVDKIFIRFPAKWWKDGCQGFN-FYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLL-GWIA  225 (412)
Q Consensus       148 k~~ai~~l~~g~~~KV~l~f~~~fW~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~w~~~~~~~~~~~~~~~vL~-~~~~  225 (412)
                      +.+++++++|++..||+|.|+++||+++...++ ...++...           ...|...    ...+..+++|+ +|+.
T Consensus       308 ~~~~l~~~~~~~~~kv~l~~~~~~w~~~~~~~g~~~~~~~~~-----------~~~~~~s----~~~~~~~~~l~~~~~~  372 (489)
T 2jae_A          308 VLTALKAAKPSSSGKLGIEYSRRWWETEDRIYGGASNTDKDI-----------SQIMFPY----DHYNSDRGVVVAYYSS  372 (489)
T ss_dssp             HHHHHHTEECCCEEEEEEEESSCHHHHTTCCCSCEEEESSTT-----------CEEECCS----SSTTSSCEEEEEEEEE
T ss_pred             HHHHHHhCCCccceEEEEEeCCCCccCCCCcccccccCCCCc-----------eEEEeCC----CCCCCCCCEEEEEeeC
Confidence            999999999999999999999999976433332 22122111           0011111    01111134555 6889


Q ss_pred             ccchHHHhcCCHHHHHHHHHHHHHHHhCCCCCCCCCcEEEeecCCCCCCCccccCCCC------CccccccccCcccccC
Q psy10795        226 GPTARYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVRSAWSINPHFRGSYSHHG------PTQHQCRRLGRSSYQQ  299 (412)
Q Consensus       226 g~~a~~~~~lsdeel~~~~l~~L~~~~g~~~~~~~~~~~~~~~W~~dp~~~G~ys~~~------pg~~~~~~~~~~~~~~  299 (412)
                      |+.+..+..++++++++.++++|+++||.+ ....|.....++|.++||++|+|+++.      |++.            
T Consensus       373 g~~~~~~~~~~~~~~~~~~l~~L~~~~~~~-~~~~~~~~~~~~W~~~~~~~G~~~~~~~~~~~~~~~~------------  439 (489)
T 2jae_A          373 GKRQEAFESLTHRQRLAKAIAEGSEIHGEK-YTRDISSSFSGSWRRTKYSESAWANWAGSGGSHGGAA------------  439 (489)
T ss_dssp             THHHHHHHTSCHHHHHHHHHHHHHHHHCGG-GGSSEEEEEEEEGGGSTTTSCSSCEETTC-------C------------
T ss_pred             CchhhhhhcCCHHHHHHHHHHHHHHHcCcc-hhhhccccEEEEcCCCCCCCCcchhcccccCCCcccc------------
Confidence            988888999999999999999999999831 124577778899999999999998874      4421            


Q ss_pred             CCCCCCCCccccccCCCccCCCCccCcchHHhccccccCCCCceEEEecccccCcCcccchhhhhccHHHHHHHHHHHHh
Q psy10795        300 RRPPRAPLCRRSYQPTSLRNGSDRLNTSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVYLRR  379 (412)
Q Consensus       300 ~~~~~~p~~~~~~~~~g~~~~~~~~~~~~~~l~~p~~~~~~~~~l~fAGe~t~~~~~g~~eGA~~SG~raA~~i~~~l~~  379 (412)
                                               ...++.+++|.+      +||||||+|+. +.++|+||++||.+||++|+..++.
T Consensus       440 -------------------------~~~~~~l~~~~~------~l~faG~~~~~-~~~~v~gAi~sg~~aA~~i~~~l~~  487 (489)
T 2jae_A          440 -------------------------TPEYEKLLEPVD------KIYFAGDHLSN-AIAWQHGALTSARDVVTHIHERVAQ  487 (489)
T ss_dssp             -------------------------CHHHHHHTSCBT------TEEECSGGGBS-STTSHHHHHHHHHHHHHHHHHHHHC
T ss_pred             -------------------------hhhHHHHhCCCC------cEEEeEHHhcc-CccHHHHHHHHHHHHHHHHHHHHhh
Confidence                                     134567788874      89999999985 6689999999999999999988765


Q ss_pred             c
Q psy10795        380 E  380 (412)
Q Consensus       380 ~  380 (412)
                      +
T Consensus       488 ~  488 (489)
T 2jae_A          488 E  488 (489)
T ss_dssp             -
T ss_pred             c
Confidence            3

>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*

Probab=99.93  E-value=3.8e-27  Score=248.16  Aligned_cols=240  Identities=16%  Similarity=0.072  Sum_probs=169.1

Q ss_pred             CCcEEcCCeEE--EEEecCCCc-------EEEE-eCCCc--EEEeCEEEEeCChhhhhc----Cccc-------c-----
Q psy10795         89 SNKILYKKEVN--KIDWEYQNG-------AAVS-CSDGS--VYTAYKIIITVPLGVLKS----KLIT-------F-----  140 (412)
Q Consensus        89 ~~~I~ln~~V~--~I~~~~~~~-------V~V~-~~~G~--~~~ad~VIvTvP~~~L~~----~~i~-------f-----  140 (412)
                      ++.|+|+++|+  +|.+ .+++       |+|+ +.+|+  +++||+||||+|+++|+.    ..|.       |     
T Consensus       360 g~~I~l~~~V~~~~I~~-~~~g~~~~~~~V~V~~~~~G~~~~~~aD~VIvTvP~~~L~~~~~r~~i~~~~~~~~~~~~~~  438 (721)
T 3ayj_A          360 VGAGKLVVQVRQERVAN-ACHSGTASARAQLLSYDSHNAVHSEAYDFVILAVPHDQLTPIVSRSGFEHAASQNLGDAGLG  438 (721)
T ss_dssp             HTTTSEEEEEECEEEEE-EEECSSSSCCEEEEEEETTCCEEEEEESEEEECSCHHHHHHHHSSSCSSCEEEEEESCGGGT
T ss_pred             CCceEeCCEEEeeeEEE-CCCCCccccceEEEEEecCCceEEEEcCEEEECCCHHHHhhccccccccccccccccccccc
Confidence            46799999999  9998 5444       9994 56776  789999999999999953    2244       3     


Q ss_pred             ---------cCC-C-c-------HHHHHHHhcCCCcceeEEEEEc-----CCCccCCCCC-ceeEeecCCCccccccccc
Q psy10795        141 ---------VPS-L-P-------AQKLNAIEGLNFGTVDKIFIRF-----PAKWWKDGCQ-GFNFYWTQQDKMDLFKDMV  196 (412)
Q Consensus       141 ---------~P~-L-p-------~~k~~ai~~l~~g~~~KV~l~f-----~~~fW~~~~~-~~~~~~~~~~~~~~~g~~~  196 (412)
                               .|+ | |       ..+.+||++++|++..||++.|     ++|||+++.. .+...++|..++       
T Consensus       439 ~~~~~~~~~~pplLlp~~~~~~~~~~~~Ai~~l~~~~s~Kv~l~~~~~~~~~~fW~~~~g~~i~~s~TD~~~r-------  511 (721)
T 3ayj_A          439 LETHTYNQVYPPLLLSDSSPAANARIVTAIGQLHMARSSKVFATVKTAALDQPWVPQWRGEPIKAVVSDSGLA-------  511 (721)
T ss_dssp             CCCEEEEEEBCSSCCCSSCHHHHHHHHHHHHTCCEECEEEEEEEEEGGGGGSTTSCEETTEECCEEEETTTTE-------
T ss_pred             cccccccccCCcccCCcccccccHHHHHHHHhcCcccceEEEEEEccccCCCCcccccCCCCceeeecCCCcc-------
Confidence                     344 6 8       8999999999999999999999     9999987511 112233443211       


Q ss_pred             cCCCCCcc---ccccceeecCCCCcEEEEEecccchHHH------hcCCHHHH-------HHHHHHHHH--HHhCCCCC-
Q psy10795        197 HVDGKPWV---WGILGFYMDAEDPLTLLGWIAGPTARYM------ETLPMAVL-------QADIMRLFR--HFLGGAYI-  257 (412)
Q Consensus       197 ~~~~~~w~---~~~~~~~~~~~~~~vL~~~~~g~~a~~~------~~lsdeel-------~~~~l~~L~--~~~g~~~~-  257 (412)
                          ..+.   ....++.. ++...+|++|++++.|..+      ..+++++.       ++.++++|+  ++||. .. 
T Consensus       512 ----~~~~~p~p~~~d~~~-~~~gvlL~sYtwg~dA~~~~~~~g~~~~~~~er~~~~~~~~~~~l~~la~~~~~p~-~~~  585 (721)
T 3ayj_A          512 ----ASYVVPSPIVEDGQA-PEYSSLLASYTWEDDSTRLRHDFGLYPQNPATETGTADGMYRTMVNRAYRYVKYAG-ASN  585 (721)
T ss_dssp             ----EEEEEECSCC----C-CSEEEEEEEEEETHHHHHHHTTCCSSSEESSSSSCCCHHHHHHHHHHTCCEECCTT-CSS
T ss_pred             ----eEEEeccCcccccCC-CCCcEEEEEEeCccchhhhhccccccCCChHHhhhhhhHHHHHHHHHHhhhccCcc-ccc
Confidence                0111   00001111 2122367789999999998      66777676       999999999  88884 11 


Q ss_pred             -----------CCCCcEEEeecCCCCCCCccccCCCCCccccccccCcccccCCCCCCCCCccccccCCCccCCCCccCc
Q psy10795        258 -----------IPEPIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLNT  326 (412)
Q Consensus       258 -----------~~~~~~~~~~~W~~dp~~~G~ys~~~pg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~  326 (412)
                                 ...+.+...++|.+|| +.|+|..+.|||+..+++                               +..
T Consensus       586 ~~~~~~~~l~~~~~~~~~~~~dW~~dp-s~Gaf~~~~pgq~~~~~l-------------------------------~~~  633 (721)
T 3ayj_A          586 AQPWWFYQLLAEARTADRFVFDWTTNK-TAGGFKLDMTGDHHQSNL-------------------------------CFR  633 (721)
T ss_dssp             CEECHHHHHHHTSCSTTCEEEEGGGST-TSSSEECCBTTTHHHHHH-------------------------------HHH
T ss_pred             cccchhhhhhhhcccCceEEEeCCCCC-CCCccccCCCccchhhhh-------------------------------hhh
Confidence                       0113456899999999 999999998987310000                               000


Q ss_pred             ch--HHhccccccCCCCceEEEecccccCcCcccchhhhhccHHHHHHHHHHHHhcc
Q psy10795        327 SA--ADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVYLRREG  381 (412)
Q Consensus       327 ~~--~~l~~p~~~~~~~~~l~fAGe~t~~~~~g~~eGA~~SG~raA~~i~~~l~~~~  381 (412)
                      +.  ..+.+|.      +|||||||+++. +.||||||++||.+||.+|+..+....
T Consensus       634 ~~~~~~~~~~~------gri~fAGe~~S~-~~GWieGAl~Sa~~Aa~~i~~~~~~~~  683 (721)
T 3ayj_A          634 YHTHALAASLD------NRFFIASDSYSH-LGGWLEGAFMSALNAVAGLIVRANRGD  683 (721)
T ss_dssp             GGGGGGCTTTC------CCEEECSGGGSS-CTTSHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             hhhhccccCCC------CCEEEeehhhcc-CCceehHHHHHHHHHHHHHHHHhcCCC
Confidence            11  1123333      399999999996 679999999999999999999987754

>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}

Probab=99.91  E-value=3.6e-24  Score=216.96  Aligned_cols=235  Identities=13%  Similarity=0.185  Sum_probs=171.9

Q ss_pred             cceeeecCCcCCCCCCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChhhhhcCcccccCCCcHHHHHHHhc
Q psy10795         75 PLTLLVSGQTPVDLSNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNAIEG  154 (412)
Q Consensus        75 p~vl~~~~~~~~~~~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~~L~~~~i~f~P~Lp~~k~~ai~~  154 (412)
                      +..+...+++.+. ..+|++|++|++|++ ++++|.|++.+|++++||+||+|+|+.++++  +.+.|++    .+++++
T Consensus       234 ~~~l~~~l~~~l~-~~~i~~~~~V~~i~~-~~~~~~v~~~~g~~~~ad~vi~a~p~~~~~~--l~~~~~~----~~~~~~  305 (470)
T 3i6d_A          234 LQTLVEEIEKQLK-LTKVYKGTKVTKLSH-SGSCYSLELDNGVTLDADSVIVTAPHKAAAG--MLSELPA----ISHLKN  305 (470)
T ss_dssp             THHHHHHHHHTCC-SEEEECSCCEEEEEE-CSSSEEEEESSSCEEEESEEEECSCHHHHHH--HTTTSTT----HHHHHT
T ss_pred             HHHHHHHHHHhcC-CCEEEeCCceEEEEE-cCCeEEEEECCCCEEECCEEEECCCHHHHHH--HcCCchh----hHHHhc
Confidence            3344445555442 258999999999999 7888999999998999999999999999998  4444432    578999


Q ss_pred             CCCcceeEEEEEcCCCccCCCCCceeEeecCCCccccccccccCCCCCccccccceeecCCCCcEEEEEecccchHHHhc
Q psy10795        155 LNFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWIAGPTARYMET  234 (412)
Q Consensus       155 l~~g~~~KV~l~f~~~fW~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~w~~~~~~~~~~~~~~~vL~~~~~g~~a~~~~~  234 (412)
                      ++|+++.||++.|+++||+.+..+++++.+..+...+.       ...|.+..++... +++..+|++++++..++.+..
T Consensus       306 ~~~~~~~~v~l~~~~~~~~~~~~~~g~l~~~~~~~~~~-------~~~~~s~~~~~~~-p~~~~~l~~~~~~~~~~~~~~  377 (470)
T 3i6d_A          306 MHSTSVANVALGFPEGSVQMEHEGTGFVISRNSDFAIT-------ACTWTNKKWPHAA-PEGKTLLRAYVGKAGDESIVD  377 (470)
T ss_dssp             CEEEEEEEEEEEESSTTCCCSSCSSEEEECSTTCCSEE-------EEEEHHHHCGGGS-CTTCEEEEEEECCSSCCGGGT
T ss_pred             CCCCceEEEEEEECchhcCCCCCCeEEEccCCCCCCce-------EEEEEcCcCCCcC-CCCCEEEEEEECCCCCccccC
Confidence            99999999999999999987656676664433211010       1235443333222 334567889998888888899


Q ss_pred             CCHHHHHHHHHHHHHHHhCCCCCCCCCcEEEeecCCCCCCCccccCCCCCccccccccCcccccCCCCCCCCCccccccC
Q psy10795        235 LPMAVLQADIMRLFRHFLGGAYIIPEPIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQP  314 (412)
Q Consensus       235 lsdeel~~~~l~~L~~~~g~~~~~~~~~~~~~~~W~~dp~~~G~ys~~~pg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  314 (412)
                      ++++++++.++++|+++||.   .+.|....+++|..      ++..+.||..                           
T Consensus       378 ~~~~~~~~~~~~~l~~~~g~---~~~p~~~~~~~w~~------a~p~~~~g~~---------------------------  421 (470)
T 3i6d_A          378 LSDNDIINIVLEDLKKVMNI---NGEPEMTCVTRWHE------SMPQYHVGHK---------------------------  421 (470)
T ss_dssp             SCHHHHHHHHHHHHGGGSCC---CSCCSEEEEEEEEE------EEEECBTTHH---------------------------
T ss_pred             CCHHHHHHHHHHHHHHHhCC---CCCceEEEEEEcCC------ccCCCCCCHH---------------------------
Confidence            99999999999999999984   35788899999964      2322322210                           


Q ss_pred             CCccCCCCccCcchHHhccccccCCCCceEEEecccccCcCcccchhhhhccHHHHHHHHHHH
Q psy10795        315 TSLRNGSDRLNTSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVYL  377 (412)
Q Consensus       315 ~g~~~~~~~~~~~~~~l~~p~~~~~~~~~l~fAGe~t~~~~~g~~eGA~~SG~raA~~i~~~l  377 (412)
                             +.+....+.+.+|..      +||||||+++.   .+|+||++||+++|++|++.|
T Consensus       422 -------~~~~~~~~~l~~~~~------~l~~aG~~~~g---~gv~~a~~sG~~aA~~i~~~l  468 (470)
T 3i6d_A          422 -------QRIKELREALASAYP------GVYMTGASFEG---VGIPDCIDQGKAAVSDALTYL  468 (470)
T ss_dssp             -------HHHHHHHHHHHHHST------TEEECSTTTSC---CSHHHHHHHHHHHHHHHHHHH
T ss_pred             -------HHHHHHHHHHHhhCC------CEEEEeecCCC---CCHHHHHHHHHHHHHHHHHHh
Confidence                   011123345666664      89999999865   349999999999999999876

>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}

Probab=99.90  E-value=3.8e-23  Score=201.70  Aligned_cols=214  Identities=15%  Similarity=0.181  Sum_probs=159.6

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChhhhhcCcccccCCCcHHHHHHHhcCCCcceeEEEEEcC
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNAIEGLNFGTVDKIFIRFP  168 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~~L~~~~i~f~P~Lp~~k~~ai~~l~~g~~~KV~l~f~  168 (412)
                      +.+|+++++|++|++ ++++|+|++.+|++++||+||+|+|++++.+++-.+.|+||+...++++++.|+++.+|+|.|+
T Consensus       123 g~~i~~~~~V~~i~~-~~~~~~v~~~~g~~~~ad~vV~A~p~~~~~~ll~~~~~~l~~~~~~~l~~~~~~~~~~v~l~~~  201 (342)
T 3qj4_A          123 GAEVYFRHRVTQINL-RDDKWEVSKQTGSPEQFDLIVLTMPVPEILQLQGDITTLISECQRQQLEAVSYSSRYALGLFYE  201 (342)
T ss_dssp             TCEEESSCCEEEEEE-CSSSEEEEESSSCCEEESEEEECSCHHHHTTCBSTHHHHSCHHHHHHHHTCCBCCEEEEEEECS
T ss_pred             CCEEEeCCEEEEEEE-cCCEEEEEECCCCEEEcCEEEECCCHHHHHHHhcccccccCHHHHHHHhcCCccccEEEEEEEC
Confidence            568999999999999 8889999999998899999999999999998533456778988899999999999999999999


Q ss_pred             CCccCCCCCceeEeecCCCccccccccccCCCCCccccccceeecC----CCCcEEEEEecccchHHHhcCCHHHHHHHH
Q psy10795        169 AKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDA----EDPLTLLGWIAGPTARYMETLPMAVLQADI  244 (412)
Q Consensus       169 ~~fW~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~w~~~~~~~~~~~----~~~~vL~~~~~g~~a~~~~~lsdeel~~~~  244 (412)
                      ++||.+. +..+++.++..            ...|..  ++.++..    ++..+++.++++.+++++.+++++++.+.+
T Consensus       202 ~~~~~~~-~~~g~~~~~~~------------~~~~~~--~~~~k~~r~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~  266 (342)
T 3qj4_A          202 AGTKIDV-PWAGQYITSNP------------CIRFVS--IDNKKRNIESSEIGPSLVIHTTVPFGVTYLEHSIEDVQELV  266 (342)
T ss_dssp             SCC--CC-SCSEEECSSCS------------SEEEEE--EHHHHTTCCCC-CCCEEEEEECHHHHHHTTTSCHHHHHHHH
T ss_pred             CCCccCC-ceeeEEccCCc------------ceEEEE--ccccCCCCCCCCCCceEEEECCHHHHHHhhcCCHHHHHHHH
Confidence            9998652 33344423221            123432  2222221    122378888998889899999999999999


Q ss_pred             HHHHHHHhCCCCCCCCCcEEEeecCCCCCCCccccCCCCCccccccccCcccccCCCCCCCCCccccccCCCccCCCCcc
Q psy10795        245 MRLFRHFLGGAYIIPEPIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRL  324 (412)
Q Consensus       245 l~~L~~~~g~~~~~~~~~~~~~~~W~~dp~~~G~ys~~~pg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~~~~  324 (412)
                      +++|++++|.   .+.|..+.++||..        +.+.++.                ...|                  
T Consensus       267 ~~~l~~~~g~---~~~p~~~~v~rW~~--------a~p~~~~----------------~~~~------------------  301 (342)
T 3qj4_A          267 FQQLENILPG---LPQPIATKCQKWRH--------SQVTNAA----------------ANCP------------------  301 (342)
T ss_dssp             HHHHHHHSCS---CCCCSEEEEEEETT--------CSBSSCC----------------SSSC------------------
T ss_pred             HHHHHHhccC---CCCCceeeeccccc--------ccccccc----------------CCCc------------------
Confidence            9999999983   56899999999973        2221000                0000                  


Q ss_pred             CcchHHhc-cccccCCCCceEEEecccccCcCcccchhhhhccHHHHHHHHHH
Q psy10795        325 NTSAADLA-APVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVY  376 (412)
Q Consensus       325 ~~~~~~l~-~p~~~~~~~~~l~fAGe~t~~~~~g~~eGA~~SG~raA~~i~~~  376 (412)
                          ..+. .+.      |+|++|||++..   ++||||++||.+||++|++.
T Consensus       302 ----~~~~~~~~------~~l~laGd~~~g---~~v~~ai~sg~~aa~~i~~~  341 (342)
T 3qj4_A          302 ----GQMTLHHK------PFLACGGDGFTQ---SNFDGCITSALCVLEALKNY  341 (342)
T ss_dssp             ----SCEEEETT------TEEEECSGGGSC---SSHHHHHHHHHHHHHHHTTC
T ss_pred             ----ceeEecCC------ccEEEEccccCC---CCccHHHHHHHHHHHHHHhh
Confidence                0111 122      589999999977   68999999999999999764

>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}

Probab=99.88  E-value=3.3e-23  Score=210.95  Aligned_cols=232  Identities=13%  Similarity=0.108  Sum_probs=166.2

Q ss_pred             eeeecCCcCCCCCCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChhhhhcCcccccCCCcHHHHHHHhcCC
Q psy10795         77 TLLVSGQTPVDLSNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNAIEGLN  156 (412)
Q Consensus        77 vl~~~~~~~~~~~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~~L~~~~i~f~P~Lp~~k~~ai~~l~  156 (412)
                      .+..++++.+. ..+|++|++|++|++ ++++|+|++.+| +++||+||+|+|+.++++  +.+.|++     ++++++.
T Consensus       237 ~l~~~l~~~l~-~~~i~~~~~V~~i~~-~~~~~~v~~~~g-~~~ad~vV~a~p~~~~~~--ll~~~~~-----~~~~~~~  306 (475)
T 3lov_A          237 SLIERLEEVLE-RSEIRLETPLLAISR-EDGRYRLKTDHG-PEYADYVLLTIPHPQVVQ--LLPDAHL-----PELEQLT  306 (475)
T ss_dssp             HHHHHHHHHCS-SCEEESSCCCCEEEE-ETTEEEEECTTC-CEEESEEEECSCHHHHHH--HCTTSCC-----HHHHTCC
T ss_pred             HHHHHHHhhcc-CCEEEcCCeeeEEEE-eCCEEEEEECCC-eEECCEEEECCCHHHHHH--HcCccCH-----HHHhcCC
Confidence            44445555442 258999999999998 788899999999 899999999999999998  4555544     6889999


Q ss_pred             CcceeEEEEEcCCCccCCCCCceeEeecCCCccccccccccCCCCCccccccceeecCCCCcEEEEEecccchHHHhcCC
Q psy10795        157 FGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWIAGPTARYMETLP  236 (412)
Q Consensus       157 ~g~~~KV~l~f~~~fW~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~w~~~~~~~~~~~~~~~vL~~~~~g~~a~~~~~ls  236 (412)
                      |+++.||++.|+++| .....+++++.+..+...+.       ...|.+..++... ++ ..+|.+|+++..+..+..++
T Consensus       307 ~~~~~~v~l~~~~~~-~~~~~g~g~l~~~~~~~~~~-------~~~~~s~~~~~~~-p~-~~~l~~~~~~~~~~~~~~~~  376 (475)
T 3lov_A          307 THSTATVTMIFDQQQ-SLPIEGTGFVVNRRAPYSIT-------ACTAIDQKWNHSA-PD-HTVLRAFVGRPGNDHLVHES  376 (475)
T ss_dssp             EEEEEEEEEEEECCS-SCSSSSSEEEECTTSSCSEE-------EEEEHHHHCTTTC-TT-EEEEEEEECBTTBCGGGGSC
T ss_pred             CCeEEEEEEEECCcC-CCCCCCEEEEecCCCCCceE-------EEEEEcccCCCCC-CC-cEEEEEEeCCCCCCcccCCC
Confidence            999999999999998 34455666664433211111       1134332232221 22 45788899888888888999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCCCCCCcEEEeecCCCCCCCccccCCCCCccccccccCcccccCCCCCCCCCccccccCCC
Q psy10795        237 MAVLQADIMRLFRHFLGGAYIIPEPIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTS  316 (412)
Q Consensus       237 deel~~~~l~~L~~~~g~~~~~~~~~~~~~~~W~~dp~~~G~ys~~~pg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g  316 (412)
                      ++++++.++++|+++||.   ...|....+++|..+      +..+.||..                             
T Consensus       377 ~e~~~~~~~~~L~~~~g~---~~~p~~~~v~~w~~a------~p~~~~g~~-----------------------------  418 (475)
T 3lov_A          377 DEVLQQAVLQDLEKICGR---TLEPKQVIISRLMDG------LPAYTVGHA-----------------------------  418 (475)
T ss_dssp             HHHHHHHHHHHHHHHHSS---CCCCSEEEEEEEEEE------EECCCTTHH-----------------------------
T ss_pred             HHHHHHHHHHHHHHHhCC---CCCCeEEEEEEcccC------CCCCCCChH-----------------------------
Confidence            999999999999999995   247888999999853      222222210                             


Q ss_pred             ccCCCCccCcchHHhccccccCCCCceEEEecccccCcCcccchhhhhccHHHHHHHHHHHHhc
Q psy10795        317 LRNGSDRLNTSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVYLRRE  380 (412)
Q Consensus       317 ~~~~~~~~~~~~~~l~~p~~~~~~~~~l~fAGe~t~~~~~g~~eGA~~SG~raA~~i~~~l~~~  380 (412)
                           ..+....+.+.+|+.      +||||||+++.   .+|+||+.||+++|++|+..+...
T Consensus       419 -----~~~~~~~~~l~~~~~------~l~~aG~~~~g---~g~~~a~~sG~~aA~~i~~~l~~~  468 (475)
T 3lov_A          419 -----DRIQRVREEVLAQYP------GIYLAGLAYDG---VGLPDCVASAKTMIESIELEQSHT  468 (475)
T ss_dssp             -----HHHHHHHHHHHHHST------TEEECSTTTSC---SSHHHHHHHHHHHHHHHHHTC---
T ss_pred             -----HHHHHHHHHHHhhCC------CEEEEccCCCC---CCHHHHHHHHHHHHHHHHHHhhcc
Confidence                 011122345666664      89999999875   459999999999999999877554

>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*

Probab=99.87  E-value=6.8e-22  Score=201.27  Aligned_cols=242  Identities=11%  Similarity=0.132  Sum_probs=164.2

Q ss_pred             eccCCcceeeecCCcCCCCCCcEEcCCeEEEEEecCCCcEEEEe---CCCcEEEeCEEEEeCChhhhhcCcccccCCCcH
Q psy10795         70 MDAEDPLTLLVSGQTPVDLSNKILYKKEVNKIDWEYQNGAAVSC---SDGSVYTAYKIIITVPLGVLKSKLITFVPSLPA  146 (412)
Q Consensus        70 ~v~~~p~vl~~~~~~~~~~~~~I~ln~~V~~I~~~~~~~V~V~~---~~G~~~~ad~VIvTvP~~~L~~~~i~f~P~Lp~  146 (412)
                      ........+..++++.+  +.+|++|++|++|.+ ++++|.|++   .+|+++.||+||+|+|+.++.+    +.|+||+
T Consensus       232 ~~~gG~~~l~~~l~~~l--g~~i~~~~~V~~i~~-~~~~~~v~~~~~~~g~~~~ad~vV~a~~~~~~~~----ll~~l~~  304 (478)
T 2ivd_A          232 TFDGGLQVLIDALAASL--GDAAHVGARVEGLAR-EDGGWRLIIEEHGRRAELSVAQVVLAAPAHATAK----LLRPLDD  304 (478)
T ss_dssp             EETTCTHHHHHHHHHHH--GGGEESSEEEEEEEC-C--CCEEEEEETTEEEEEECSEEEECSCHHHHHH----HHTTTCH
T ss_pred             EECCCHHHHHHHHHHHh--hhhEEcCCEEEEEEe-cCCeEEEEEeecCCCceEEcCEEEECCCHHHHHH----HhhccCH
Confidence            33333344555555544  568999999999998 777899988   7788899999999999999987    2377999


Q ss_pred             HHHHHHhcCCCcceeEEEEEcCCCccCCCCCceeEeecCCCccccccccccCCCCCccccccceeecCCCCcEEEEEecc
Q psy10795        147 QKLNAIEGLNFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWIAG  226 (412)
Q Consensus       147 ~k~~ai~~l~~g~~~KV~l~f~~~fW~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~w~~~~~~~~~~~~~~~vL~~~~~g  226 (412)
                      .+.++++++.|+++.||++.|++++|+.. .+++++.+..+...+.       ...|.+..+.. ..+.+..+|++++.+
T Consensus       305 ~~~~~l~~~~~~~~~~v~l~~~~~~~~~~-~~~~~~~~~~~~~~~~-------~~~~~s~~~~~-~~p~g~~~l~~~~~~  375 (478)
T 2ivd_A          305 ALAALVAGIAYAPIAVVHLGFDAGTLPAP-DGFGFLVPAEEQRRML-------GAIHASTTFPF-RAEGGRVLYSCMVGG  375 (478)
T ss_dssp             HHHHHHHTCCBCCEEEEEEEECTTSSCCC-CSSEEECCGGGCCSCC-------EEEEHHHHCGG-GBSTTCEEEEEEEEC
T ss_pred             HHHHHHhcCCCCcEEEEEEEEccccCCCC-CceEEEecCCCCCceE-------EEEEEcccCCC-cCCCCCEEEEEEeCC
Confidence            99999999999999999999999999763 3444442211100000       11222211111 113344578889988


Q ss_pred             cchHHHhcCCHHHHHHHHHHHHHHHhCCCCCCCCCcEEEeecCCCCCCCccccCCCCCccccccccCcccccCCCCCCCC
Q psy10795        227 PTARYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAP  306 (412)
Q Consensus       227 ~~a~~~~~lsdeel~~~~l~~L~~~~g~~~~~~~~~~~~~~~W~~dp~~~G~ys~~~pg~~~~~~~~~~~~~~~~~~~~p  306 (412)
                      ..+..+..++++++.+.+++.|+++||.   ...|....+++|..      +++.+.||+.                   
T Consensus       376 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~p~~~~~~~w~~------~~p~~~~g~~-------------------  427 (478)
T 2ivd_A          376 ARQPGLVEQDEDALAALAREELKALAGV---TARPSFTRVFRWPL------GIPQYNLGHL-------------------  427 (478)
T ss_dssp             TTCGGGGGSCHHHHHHHHHHHHHHHHCC---CSCCSEEEEEEESS------CCBCCBTTHH-------------------
T ss_pred             cCCccccCCCHHHHHHHHHHHHHHHhCC---CCCCcEEEEEECCC------cccCCCcCHH-------------------
Confidence            8887788899999999999999999985   24677778899974      3433433321                   


Q ss_pred             CccccccCCCccCCCCccCcchHHhccccccCCCCceEEEecccccCcCcccchhhhhccHHHHHHHHHHHHhc
Q psy10795        307 LCRRSYQPTSLRNGSDRLNTSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVYLRRE  380 (412)
Q Consensus       307 ~~~~~~~~~g~~~~~~~~~~~~~~l~~p~~~~~~~~~l~fAGe~t~~~~~g~~eGA~~SG~raA~~i~~~l~~~  380 (412)
                                         .....+..++..   .++|||||+++..   ++|+||+.||++||++|+..++..
T Consensus       428 -------------------~~~~~~~~~~~~---~~~l~~aG~~~~g---~gv~gA~~SG~~aA~~i~~~l~~~  476 (478)
T 2ivd_A          428 -------------------ERVAAIDAALQR---LPGLHLIGNAYKG---VGLNDCIRNAAQLADALVAGNTSH  476 (478)
T ss_dssp             -------------------HHHHHHHHHHHT---STTEEECSTTTSC---CSHHHHHHHHHHHHHHHCC-----
T ss_pred             -------------------HHHHHHHHHHhh---CCCEEEEccCCCC---CCHHHHHHHHHHHHHHHHHhhccC
Confidence                               011222222210   1489999999843   359999999999999998876543

>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5

Probab=99.86  E-value=1.9e-22  Score=206.73  Aligned_cols=239  Identities=15%  Similarity=0.172  Sum_probs=164.8

Q ss_pred             eeeecCCcCCCCCCcEEcCCeEEEEEecCCCc------EEEEeC--CC---cEEEeCEEEEeCChhhhhcCcccc---cC
Q psy10795         77 TLLVSGQTPVDLSNKILYKKEVNKIDWEYQNG------AAVSCS--DG---SVYTAYKIIITVPLGVLKSKLITF---VP  142 (412)
Q Consensus        77 vl~~~~~~~~~~~~~I~ln~~V~~I~~~~~~~------V~V~~~--~G---~~~~ad~VIvTvP~~~L~~~~i~f---~P  142 (412)
                      .+..++++.+. ..+|++|++|++|.+ .+++      |.|++.  +|   +++.||+||+|+|+.++.+.  .+   .+
T Consensus       244 ~l~~~l~~~l~-~~~i~~~~~V~~I~~-~~~~~~~~~~~~v~~~~~~g~~~~~~~ad~VI~a~p~~~l~~l--l~~~~~~  319 (504)
T 1sez_A          244 TLTDAICKDLR-EDELRLNSRVLELSC-SCTEDSAIDSWSIISASPHKRQSEEESFDAVIMTAPLCDVKSM--KIAKRGN  319 (504)
T ss_dssp             HHHHHHHTTSC-TTTEETTCCEEEEEE-ECSSSSSSCEEEEEEBCSSSSCBCCCEESEEEECSCHHHHHTS--EEESSSS
T ss_pred             HHHHHHHhhcc-cceEEcCCeEEEEEe-cCCCCcccceEEEEEcCCCCccceeEECCEEEECCCHHHHHHH--hhcccCC
Confidence            45555555551 268999999999998 6666      767654  56   57899999999999999984  32   13


Q ss_pred             CCcHHHHHHHhcCCCcceeEEEEEcCCCccCCCCCceeEeecCCCccccccccccCCCCCccccccceeecCCCCcEEEE
Q psy10795        143 SLPAQKLNAIEGLNFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLG  222 (412)
Q Consensus       143 ~Lp~~k~~ai~~l~~g~~~KV~l~f~~~fW~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~w~~~~~~~~~~~~~~~vL~~  222 (412)
                      ++++..   ++++.|.++.+|+|.|++++|+....++++++++.+..  .|..  .....|.+.+++... +++..+|++
T Consensus       320 ~~~~~~---l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~l~~~~~~~--~g~~--~~~~~~~s~~~~~~~-p~g~~~l~~  391 (504)
T 1sez_A          320 PFLLNF---IPEVDYVPLSVVITTFKRENVKYPLEGFGVLVPSKEQQ--HGLK--TLGTLFSSMMFPDRA-PNNVYLYTT  391 (504)
T ss_dssp             BCCCTT---SCCCCEEEEEEEEEEEEGGGBSSCCCSSEEECCGGGGG--GTCC--SSEEEEHHHHCGGGS-CTTEEEEEE
T ss_pred             cccHHH---HhcCCCCceEEEEEEEchhhcCCCCCceEEEcCCCCCC--CCCc--cceEEeeccccCCcC-CCCCEEEEE
Confidence            454432   77889999999999999999987666676654432210  0000  001123332333222 334567889


Q ss_pred             EecccchHHHhcCCHHHHHHHHHHHHHHHhCCCCCCCCCcEEEeecCCCCCCCccccCCCCCccccccccCcccccCCCC
Q psy10795        223 WIAGPTARYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRP  302 (412)
Q Consensus       223 ~~~g~~a~~~~~lsdeel~~~~l~~L~~~~g~~~~~~~~~~~~~~~W~~dp~~~G~ys~~~pg~~~~~~~~~~~~~~~~~  302 (412)
                      |+.|..+..+..++++++++.++++|++++|.   ...|....+++|.++      |..+.+|..               
T Consensus       392 ~~~g~~~~~~~~~~~ee~~~~v~~~L~~~~g~---~~~p~~~~~~~w~~~------~p~~~~g~~---------------  447 (504)
T 1sez_A          392 FVGGSRNRELAKASRTELKEIVTSDLKQLLGA---EGEPTYVNHLYWSKA------FPLYGHNYD---------------  447 (504)
T ss_dssp             EEESTTCGGGTTCCHHHHHHHHHHHHHHHHCB---CSCCSSEEEEEEEEE------EECCCTTHH---------------
T ss_pred             EeCCCCcccccCCCHHHHHHHHHHHHHHHhCC---CCCCeEEEEeECCCC------CCccCcCHH---------------
Confidence            99998888888999999999999999999985   236788889999642      333333210               


Q ss_pred             CCCCCccccccCCCccCCCCccCcchHHhccccccCCCCceEEEecccccCcCcccchhhhhccHHHHHHHHHHHHhc
Q psy10795        303 PRAPLCRRSYQPTSLRNGSDRLNTSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVYLRRE  380 (412)
Q Consensus       303 ~~~p~~~~~~~~~g~~~~~~~~~~~~~~l~~p~~~~~~~~~l~fAGe~t~~~~~g~~eGA~~SG~raA~~i~~~l~~~  380 (412)
                                         +.+ .....+.+|++      +|||||++++.   ++|+||+.||.+||++|++.+...
T Consensus       448 -------------------~~~-~~~~~~~~~~~------~l~~aG~~~~g---~~v~gai~sG~~aA~~il~~l~~~  496 (504)
T 1sez_A          448 -------------------SVL-DAIDKMEKNLP------GLFYAGNHRGG---LSVGKALSSGCNAADLVISYLESV  496 (504)
T ss_dssp             -------------------HHH-HHHHHHHHHST------TEEECCSSSSC---SSHHHHHHHHHHHHHHHHHHHSSC
T ss_pred             -------------------HHH-HHHHHHHHhCC------CEEEEeecCCC---CCHHHHHHHHHHHHHHHHHHHhhc
Confidence                               000 01123345654      89999999974   689999999999999999887543

>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}

Probab=99.83  E-value=2.5e-21  Score=172.03  Aligned_cols=117  Identities=19%  Similarity=0.150  Sum_probs=99.6

Q ss_pred             cEEEEEecccchHHHhcCCHHHHHHHHHHHHHHHhCCCCCCCCCcEE--EeecCCCCCCCccccCCCCCccccccccCcc
Q psy10795        218 LTLLGWIAGPTARYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRI--VRSAWSINPHFRGSYSHHGPTQHQCRRLGRS  295 (412)
Q Consensus       218 ~vL~~~~~g~~a~~~~~lsdeel~~~~l~~L~~~~g~~~~~~~~~~~--~~~~W~~dp~~~G~ys~~~pg~~~~~~~~~~  295 (412)
                      .+|++|+.|+.++.+..++++++++.++++|+++||.  ++..+..+  ..++|.+|||++|+|+++.||++        
T Consensus        37 ~~L~~~~~g~~A~~~~~l~~~e~~~~~l~~L~~~~g~--~~~~~~~~~~~~~~W~~dp~~~Ga~s~~~pg~~--------  106 (181)
T 2e1m_C           37 VVLAAYSWSDDAARWDSFDDAERYGYALENLQSVHGR--RIEVFYTGAGQTQSWLRDPYACGEAAVYTPHQM--------  106 (181)
T ss_dssp             EEEEEEEEHHHHHHHTTSCTTTTHHHHHHHHHHHHCG--GGGGTEEEEEEEEESSSCTTTSSSEECCCTTHH--------
T ss_pred             EEEEEEcCChHHHHHHcCCHHHHHHHHHHHHHHHhCC--CcHhhccCcceecccCCCCCCCCcccCcCCCch--------
Confidence            4888999999999999999999999999999999974  34233367  89999999999999999877763        


Q ss_pred             cccCCCCCCCCCccccccCCCccCCCCccCcchHHhccccccCCCCceEEEecccccCcCcccchhhhhccHHHHHHHHH
Q psy10795        296 SYQQRRPPRAPLCRRSYQPTSLRNGSDRLNTSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIV  375 (412)
Q Consensus       296 ~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~~~~l~~p~~~~~~~~~l~fAGe~t~~~~~g~~eGA~~SG~raA~~i~~  375 (412)
                                                   ..+.+.|++|.+      |||||||||+. ++||||||++||+|||++|++
T Consensus       107 -----------------------------~~~~~~l~~p~g------rl~FAGe~ts~-~~g~~eGAl~SG~raA~~i~~  150 (181)
T 2e1m_C          107 -----------------------------TAFHLDVVRPEG------PVYFAGEHVSL-KHAWIEGAVETAVRAAIAVNE  150 (181)
T ss_dssp             -----------------------------HHHHHHHHSCBT------TEEECSGGGTT-STTSHHHHHHHHHHHHHHHHT
T ss_pred             -----------------------------HHHHHHHhCCCC------cEEEEEHHHcC-CccCHHHHHHHHHHHHHHHHH
Confidence                                         134568899985      89999999996 899999999999999999998


Q ss_pred             HHHhc
Q psy10795        376 YLRRE  380 (412)
Q Consensus       376 ~l~~~  380 (412)
                      .+...
T Consensus       151 ~l~~~  155 (181)
T 2e1m_C          151 APVGD  155 (181)
T ss_dssp             CCC--
T ss_pred             HhccC
Confidence            76543

>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}

Probab=99.81  E-value=8.3e-20  Score=185.65  Aligned_cols=237  Identities=15%  Similarity=0.109  Sum_probs=160.2

Q ss_pred             CCcceeeecCCcCCC-CCCcEEcCCeEEEEEecCCCc-EEEEeCCCcEEEeCEEEEeCChhhhhcCcccccCCCcHHHHH
Q psy10795         73 EDPLTLLVSGQTPVD-LSNKILYKKEVNKIDWEYQNG-AAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLN  150 (412)
Q Consensus        73 ~~p~vl~~~~~~~~~-~~~~I~ln~~V~~I~~~~~~~-V~V~~~~G~~~~ad~VIvTvP~~~L~~~~i~f~P~Lp~~k~~  150 (412)
                      .....+..++++.+. .+.+|++|++|++|.+ ++++ |.|++. |.++.||+||+|+|+.++.+.   + |++++...+
T Consensus       231 gG~~~l~~~l~~~l~~~g~~i~~~~~V~~i~~-~~~~~~~v~~~-~~~~~ad~vv~a~p~~~~~~l---l-~~~~~~~~~  304 (477)
T 3nks_A          231 GGLEMLPQALETHLTSRGVSVLRGQPVCGLSL-QAEGRWKVSLR-DSSLEADHVISAIPASVLSEL---L-PAEAAPLAR  304 (477)
T ss_dssp             TCTTHHHHHHHHHHHHTTCEEECSCCCCEEEE-CGGGCEEEECS-SCEEEESEEEECSCHHHHHHH---S-CGGGHHHHH
T ss_pred             CCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEE-cCCceEEEEEC-CeEEEcCEEEECCCHHHHHHh---c-cccCHHHHH
Confidence            333445545544443 3678999999999998 6666 888774 448999999999999999872   3 445566788


Q ss_pred             HHhcCCCcceeEEEEEcCCCccCCCCCceeEeecCCCccccccccccCCCCCccccccceeecCCCCcEEEEEecccchH
Q psy10795        151 AIEGLNFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWIAGPTAR  230 (412)
Q Consensus       151 ai~~l~~g~~~KV~l~f~~~fW~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~w~~~~~~~~~~~~~~~vL~~~~~g~~a~  230 (412)
                      ++.++.|.++.+|.+.|++++|+.+  +++++.+..+...+.+       ..|.+..+.....+++..+|+++++|..+.
T Consensus       305 ~l~~~~~~~~~~v~l~~~~~~~~~~--~~g~l~~~~~~~~~~~-------~~~~s~~~~~~~~~~~~~~l~~~~gg~~~~  375 (477)
T 3nks_A          305 ALSAITAVSVAVVNLQYQGAHLPVQ--GFGHLVPSSEDPGVLG-------IVYDSVAFPEQDGSPPGLRVTVMLGGSWLQ  375 (477)
T ss_dssp             HHHTCCEEEEEEEEEEETTCCCSSC--SSEEECCTTTCSSEEE-------EECHHHHCGGGSTTTTCEEEEEEECHHHHH
T ss_pred             HHhcCCCCcEEEEEEEECCCCCCCC--CceEEccCCCCCCceE-------EEEeccccCCCCCCCCceEEEEEECCcccc
Confidence            9999999999999999999999643  5565544322111111       122222221111112446888999887776


Q ss_pred             HHh----cCCHHHHHHHHHHHHHHHhCCCCCCCCCcEEEeecCCCCCCCccccCCCCCccccccccCcccccCCCCCCCC
Q psy10795        231 YME----TLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAP  306 (412)
Q Consensus       231 ~~~----~lsdeel~~~~l~~L~~~~g~~~~~~~~~~~~~~~W~~dp~~~G~ys~~~pg~~~~~~~~~~~~~~~~~~~~p  306 (412)
                      .+.    .++++++++.++++|++++|.   .+.|....+++|..      ++..+.||..                   
T Consensus       376 ~~~~~~~~~~~~~~~~~~~~~L~~~~g~---~~~~~~~~v~rw~~------a~p~~~~g~~-------------------  427 (477)
T 3nks_A          376 TLEASGCVLSQELFQQRAQEAAATQLGL---KEMPSHCLVHLHKN------CIPQYTLGHW-------------------  427 (477)
T ss_dssp             HHHHSSCCCCHHHHHHHHHHHHHHHHCC---CSCCSEEEEEEEEE------EEECCBTTHH-------------------
T ss_pred             ccccccCCCCHHHHHHHHHHHHHHHhCC---CCCCcEEEEEEcCC------ccCCCCCCHH-------------------
Confidence            654    469999999999999999985   35788888999974      3443322211                   


Q ss_pred             CccccccCCCccCCCCccCcchHHhccccccCCCCceEEEecccccCcCcccchhhhhccHHHHHHHHHH
Q psy10795        307 LCRRSYQPTSLRNGSDRLNTSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVY  376 (412)
Q Consensus       307 ~~~~~~~~~g~~~~~~~~~~~~~~l~~p~~~~~~~~~l~fAGe~t~~~~~g~~eGA~~SG~raA~~i~~~  376 (412)
                                         .....+.+.+..  ..++|+|||+++.+   ..|++|+.||+++|++|+..
T Consensus       428 -------------------~~~~~~~~~l~~--~~~~l~l~G~~~~G---~gv~~a~~sg~~aA~~il~~  473 (477)
T 3nks_A          428 -------------------QKLESARQFLTA--HRLPLTLAGASYEG---VAVNDCIESGRQAAVSVLGT  473 (477)
T ss_dssp             -------------------HHHHHHHHHHHH--TTCSEEECSTTTSC---CSHHHHHHHHHHHHHHHHHC
T ss_pred             -------------------HHHHHHHHHHHh--cCCCEEEEccCCCC---CcHHHHHHHHHHHHHHHHhc
Confidence                               011122221110  01379999999866   35999999999999999863

>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}

Probab=99.59  E-value=1.6e-14  Score=144.20  Aligned_cols=212  Identities=11%  Similarity=-0.019  Sum_probs=137.1

Q ss_pred             CCcEEcCCeEEEEEecCCCcEE-EEeCCCcEEEeCEEEEeCChhhhhcCcccccCCC--cHHHHHHHhcCCCcceeEEEE
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAA-VSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSL--PAQKLNAIEGLNFGTVDKIFI  165 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~-V~~~~G~~~~ad~VIvTvP~~~L~~~~i~f~P~L--p~~k~~ai~~l~~g~~~KV~l  165 (412)
                      |.+|++|++|++|.. ++++|+ |++. |+++.||+||+|+|+..+.+. +...+.+  |+...+.++++.+++..+|.+
T Consensus       210 G~~i~~~~~V~~i~~-~~~~~~gv~~~-g~~~~ad~VV~a~~~~~~~~l-l~~~~~~~~~~~~~~~~~~~~~~~~~~v~l  286 (425)
T 3ka7_A          210 GGKIHTGQEVSKILI-ENGKAAGIIAD-DRIHDADLVISNLGHAATAVL-CSEALSKEADAAYFKMVGTLQPSAGIKICL  286 (425)
T ss_dssp             TCEEECSCCEEEEEE-ETTEEEEEEET-TEEEECSEEEECSCHHHHHHH-TTTTCCTTTTHHHHHHHHHCCCBEEEEEEE
T ss_pred             CCEEEECCceeEEEE-ECCEEEEEEEC-CEEEECCEEEECCCHHHHHHh-cCCcccccCCHHHHHHhhCcCCCceEEEEe
Confidence            679999999999998 777876 6664 778999999999999999872 1222333  777788899999999999999


Q ss_pred             EcCCCccCCCCCceeEeecCCCccccccccccCCCCCccccccceeecCCCCcEEEEEecccchHHHhcCCHHHHHHHHH
Q psy10795        166 RFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWIAGPTARYMETLPMAVLQADIM  245 (412)
Q Consensus       166 ~f~~~fW~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~w~~~~~~~~~~~~~~~vL~~~~~g~~a~~~~~lsdeel~~~~l  245 (412)
                      .|+++.+..  .++  +.+.+. ..+.+       ..+.+...... .+.+..++.+++...+ +. ... +++.++.++
T Consensus       287 ~~~~~~~~~--~~~--~~~~~~-~~~~~-------~~~~s~~~p~~-ap~G~~~l~~~~~~~~-~~-~~~-~~~~~~~~~  350 (425)
T 3ka7_A          287 AADEPLVGH--TGV--LLTPYT-RRING-------VNEVTQADPEL-APPGKHLTMCHQYVAP-EN-VKN-LESEIEMGL  350 (425)
T ss_dssp             EESSCSSCS--SSE--EECCSS-SSEEE-------EECGGGTCGGG-SCTTCEEEEEEEEECG-GG-GGG-HHHHHHHHH
T ss_pred             ecCCCccCc--CEE--EECCCh-hhcce-------EEeccCCCCCc-CCCCCeEEEEEecccc-cc-ccc-hHHHHHHHH
Confidence            999987632  222  222221 11111       11222222211 2344456666554322 11 122 245569999


Q ss_pred             HHHHHHhCCCCCCCCCcEEEeecCCCCCCCccccCCCCCccccccccCcccccCCCCCCCCCccccccCCCccCCCCccC
Q psy10795        246 RLFRHFLGGAYIIPEPIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLN  325 (412)
Q Consensus       246 ~~L~~~~g~~~~~~~~~~~~~~~W~~dp~~~G~ys~~~pg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~  325 (412)
                      ++|++++|.  .  .+....+++|..      ++..+.||.                                       
T Consensus       351 ~~l~~~~p~--~--~~~~~~v~~~~~------~~P~~~~~~---------------------------------------  381 (425)
T 3ka7_A          351 EDLKEIFPG--K--RYEVLLIQSYHD------EWPVNRAAS---------------------------------------  381 (425)
T ss_dssp             HHHHHHSTT--C--CEEEEEEEEEBT------TBCSBSSCT---------------------------------------
T ss_pred             HHHHHhCCC--C--ceEEEEEEEECC------Ccccccccc---------------------------------------
Confidence            999999984  2  344446778874      222222221                                       


Q ss_pred             cchHHhccccccCCCCceEEEecccccCcCcccchhhhhccHHHHHHHH
Q psy10795        326 TSAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAI  374 (412)
Q Consensus       326 ~~~~~l~~p~~~~~~~~~l~fAGe~t~~~~~g~~eGA~~SG~raA~~i~  374 (412)
                      ..+..-..|+.      +||+||+++.+.+.-.|+||+.||++||++|+
T Consensus       382 ~~~~~~~~p~~------gL~laG~~~~~~gg~gv~~~~~s~~~~~~~i~  424 (425)
T 3ka7_A          382 GTDPGNETPFS------GLYVVGDGAKGKGGIEVEGVALGVMSVMEKVL  424 (425)
T ss_dssp             TCCCCSBCSSB------TEEECSTTSCCTTCCHHHHHHHHHHHHHHC--
T ss_pred             CCCCCCCCCcC------CeEEeCCccCCCCCCccHHHHHHHHHHHHHhh
Confidence            01112234553      89999999999877789999999999999986

>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}

Probab=99.57  E-value=8.3e-17  Score=133.82  Aligned_cols=106  Identities=16%  Similarity=0.253  Sum_probs=70.2

Q ss_pred             cEEEeCEEEEeCChhhhhcCcccccCCCcHHHHHHHhcCCCcceeEEEEEcCCCccCCCCCceeEeecCCCccccccccc
Q psy10795        117 SVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNAIEGLNFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMV  196 (412)
Q Consensus       117 ~~~~ad~VIvTvP~~~L~~~~i~f~P~Lp~~k~~ai~~l~~g~~~KV~l~f~~~fW~~~~~~~~~~~~~~~~~~~~g~~~  196 (412)
                      ++++||+||||+|+++|+.  |.|+|+||+.+.+||++++||...||++.|+++||+++.  ..                
T Consensus         4 ~~~~Ad~VIvTvP~~vL~~--I~F~P~LP~~k~~Ai~~l~~g~~~Kv~l~f~~~FW~~~~--~~----------------   63 (130)
T 2e1m_B            4 QTWTGDLAIVTIPFSSLRF--VKVTPPFSYKKRRAVIETHYDQATKVLLEFSRRWWEFTE--AD----------------   63 (130)
T ss_dssp             EEEEESEEEECSCHHHHTT--SEEESCCCHHHHHHHHHCCEECEEEEEEEESSCGGGCCH--HH----------------
T ss_pred             eEEEcCEEEEcCCHHHHhc--CcCCCCCCHHHHHHHHhCCCcceeEEEEEECCCCCCCCC--cc----------------
Confidence            4789999999999999997  899999999999999999999999999999999998741  10                


Q ss_pred             cCCCCCccccccceeecCCCCcEEEEEe-cccchHHHhcCCHHHHHHHHHHHHHHHhCC
Q psy10795        197 HVDGKPWVWGILGFYMDAEDPLTLLGWI-AGPTARYMETLPMAVLQADIMRLFRHFLGG  254 (412)
Q Consensus       197 ~~~~~~w~~~~~~~~~~~~~~~vL~~~~-~g~~a~~~~~lsdeel~~~~l~~L~~~~g~  254 (412)
                            +...     ..++.+++|++|+ +|+.|.++..+++ +..+.++..|..++|.
T Consensus        64 ------gd~s-----~~~~~pg~l~~f~~wg~~A~~~~~l~~-~~r~~~~~~l~~~~p~  110 (130)
T 2e1m_B           64 ------WKRE-----LDAIAPGLYDYYQQWGEDDAEAALALP-QSVRNLPTGLLGAHPS  110 (130)
T ss_dssp             ------HHHH-----HHHHSTTHHHHHHHHCCCSCCCC---------------------
T ss_pred             ------cccc-----CCCCCCeEEEEecccCHHHHHHhcCCH-HHHHHHHHHHHHhCCC
Confidence                  0000     0112345888999 5999999999977 6678889999999984

>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*

Probab=99.57  E-value=3.5e-16  Score=160.06  Aligned_cols=304  Identities=10%  Similarity=0.052  Sum_probs=182.7

Q ss_pred             CCccccceEEEEcCCCCccCCCcceEeeeccCCccccccc-----cc-ccCCCCceeeeeeeEeccCCcceeeecCCcCC
Q psy10795         13 LNFGTVDKIFIRFPAKWWKDGCQGFNLYWTQQDKTDLFKD-----MV-HVDGKPWVWGILGFYMDAEDPLTLLVSGQTPV   86 (412)
Q Consensus        13 lgfgt~~Kifl~f~~~~w~~~~~~~~~~W~~~d~~~l~~~-----~~-~~~~~~W~~~i~gf~~v~~~p~vl~~~~~~~~   86 (412)
                      +|=...+++|..|.++.|..++..+...|..+....+...     .. ......+......++........++.++++.+
T Consensus       153 ~g~~l~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l  232 (513)
T 4gde_A          153 MGTGIADLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKTAGNWGPNATFRFPARGGTGGIWIAVANTL  232 (513)
T ss_dssp             HHHHHHHHTHHHHHHHHHSSCGGGBCSGGGCSSCCCCCHHHHHHHHHHTCCCCSCBTTBEEEEESSSHHHHHHHHHHHTS
T ss_pred             hhhhhhhhhcchhhhhhccCChHHhhHHHHHHhhcccchhhhhhhhhhcccccccccccceeecccCCHHHHHHHHHHHH
Confidence            3334456677788888999999999999988776432100     00 00111222222223333334445666666655


Q ss_pred             C-CCCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChhhhhcCcccccCCCcHHHHHHHhcCCCcceeEEEE
Q psy10795         87 D-LSNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNAIEGLNFGTVDKIFI  165 (412)
Q Consensus        87 ~-~~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~~L~~~~i~f~P~Lp~~k~~ai~~l~~g~~~KV~l  165 (412)
                      . .+.+|++|++|++|.. +++.  |++.+|+++.||+||+|+|+..|.+.   +.   ++....+...+.|.+...|.|
T Consensus       233 ~~~g~~i~~~~~V~~I~~-~~~~--v~~~~G~~~~ad~vI~t~P~~~l~~~---l~---~~~~~~~~~~l~y~~~~~v~l  303 (513)
T 4gde_A          233 PKEKTRFGEKGKVTKVNA-NNKT--VTLQDGTTIGYKKLVSTMAVDFLAEA---MN---DQELVGLTKQLFYSSTHVIGV  303 (513)
T ss_dssp             CGGGEEESGGGCEEEEET-TTTE--EEETTSCEEEEEEEEECSCHHHHHHH---TT---CHHHHHHHTTCCEEEEEEEEE
T ss_pred             HhcCeeeecceEEEEEEc-cCCE--EEEcCCCEEECCEEEECCCHHHHHHh---cC---chhhHhhhhcccCCceEEEEE
Confidence            4 3678999999999998 5554  56789999999999999999999882   22   234567788999999999999


Q ss_pred             EcCCCccCCCCCceeEeecCCCcc--ccc-----cccccCC------CCCccccccceeecCCCCcEEEEEecccchHHH
Q psy10795        166 RFPAKWWKDGCQGFNFYWTQQDKM--DLF-----KDMVHVD------GKPWVWGILGFYMDAEDPLTLLGWIAGPTARYM  232 (412)
Q Consensus       166 ~f~~~fW~~~~~~~~~~~~~~~~~--~~~-----g~~~~~~------~~~w~~~~~~~~~~~~~~~vL~~~~~g~~a~~~  232 (412)
                      .++........+...+..++.+..  .+.     +....+.      ...|.+..+... .+.+...+.+++.+.....+
T Consensus       304 ~~~~~~~~~~~~~~~~y~~~~~~~f~Ri~~~~n~sp~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  382 (513)
T 4gde_A          304 GVRGSRPERIGDKCWLYFPEDNCPFYRATIFSNYSPYNQPEASAALPTMQLADGSRPQS-TEAKEGPYWSIMLEVSESSM  382 (513)
T ss_dssp             EEESSCCTTTTTCCEEECCSTTCSCSEEECGGGTCGGGSCCTTCCEECCEETTSCCCSC-CSEECCCEEEEEEEEEEBTT
T ss_pred             EEeccccccccccceeeccCCCCceeEEEecCCCCcccCCCCCceEEEEEeccCCCccc-ccCCcceEEEEEecccchhc
Confidence            988764332212221222232211  000     0000000      001111111100 01122346666666556678


Q ss_pred             hcCCHHHHHHHHHHHHHHHhCCCCCCCCCcEEEeecCCCCCCCccccCCCCCccccccccCcccccCCCCCCCCCccccc
Q psy10795        233 ETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSY  312 (412)
Q Consensus       233 ~~lsdeel~~~~l~~L~~~~g~~~~~~~~~~~~~~~W~~dp~~~G~ys~~~pg~~~~~~~~~~~~~~~~~~~~p~~~~~~  312 (412)
                      ..+++|++++.++++|.++.+.. ..+.+....+.+|..      +|..+                              
T Consensus       383 ~~~~de~l~~~~~~~L~~~~~i~-~~~~i~~~~v~r~~~------ayP~y------------------------------  425 (513)
T 4gde_A          383 KPVNQETILADCIQGLVNTEMLK-PTDEIVSTYHRRFDH------GYPTP------------------------------  425 (513)
T ss_dssp             BCCCTTTHHHHHHHHHHHTTSSC-TTCEEEEEEEEEEEE------EEECC------------------------------
T ss_pred             cCCCHHHHHHHHHHHHHHhcCCC-CccceEEEEEEECCC------eeccc------------------------------
Confidence            89999999999999999998742 234567778888863      24333                              


Q ss_pred             cCCCccCCCCccCcchHHhccccccCCCCceEEEecccccCcCc-ccchhhhhccHHHHHHHHH
Q psy10795        313 QPTSLRNGSDRLNTSAADLAAPVINREGRPVLLFAGEATSPHHY-GTVNGAVESGARETANAIV  375 (412)
Q Consensus       313 ~~~g~~~~~~~~~~~~~~l~~p~~~~~~~~~l~fAGe~t~~~~~-g~~eGA~~SG~raA~~i~~  375 (412)
                       ..||   .+.+...++.|..        ++||++|-.-...|. +.|++|+.||..||++|+.
T Consensus       426 -~~~~---~~~~~~~~~~l~~--------~~l~~~GR~g~~~Y~~~n~D~a~~~g~~aa~~I~~  477 (513)
T 4gde_A          426 -TLER---EGTLTQILPKLQD--------KDIWSRGRFGSWRYEVGNQDHSFMLGVEAVDNIVN  477 (513)
T ss_dssp             -BTTH---HHHHHHHHHHHHH--------TTEEECSTTTTCCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred             -CHhH---HHHHHHHHHHHhh--------cCcEEecCCcccCcCCCCHHHHHHHHHHHHHHHHc
Confidence             2221   1111122233322        279999954444443 6899999999999999996

>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*

Probab=99.51  E-value=1.1e-14  Score=148.77  Aligned_cols=295  Identities=12%  Similarity=0.044  Sum_probs=178.8

Q ss_pred             CCccccceEEEEcCCCCccCCCcceEeeeccCCccc--cc---cccccc-CCCCceeeeeee-EeccCCcceeeecCCcC
Q psy10795         13 LNFGTVDKIFIRFPAKWWKDGCQGFNLYWTQQDKTD--LF---KDMVHV-DGKPWVWGILGF-YMDAEDPLTLLVSGQTP   85 (412)
Q Consensus        13 lgfgt~~Kifl~f~~~~w~~~~~~~~~~W~~~d~~~--l~---~~~~~~-~~~~W~~~i~gf-~~v~~~p~vl~~~~~~~   85 (412)
                      +|-...+++|..|.+..|..++..+...|..+....  +.   ...... .+..|-. ...| +.+.+.+..++.++++.
T Consensus       147 ~g~~~~~~~~~p~~~~v~~~~~~~ls~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~-~~~f~yp~~gG~~~l~~~la~~  225 (484)
T 4dsg_A          147 FGEGIADIFMRPYNFKVWAVPPCLMSTEWVEERVAPVDLERIRRNIQENRDDLGWGP-NATFRFPQRGGTGIIYQAIKEK  225 (484)
T ss_dssp             HHHHHCCCCCHHHHHHHHSSCGGGBCSSSCTTTSCCCCHHHHHHHHHHTCCCCCCST-TSEEEEESSSCTHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHhhhcCCCHHHhcHHHHhccccCCCHHHHHHHHhhcccccCCCc-cceEEeecCCCHHHHHHHHHhh
Confidence            344456677777888889999999999987766542  10   100000 0111100 1112 23434555666677666


Q ss_pred             CCCCCcEEcC--CeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChhhhhcCcccccCCCcHHHHHHHhcCCCcceeEE
Q psy10795         86 VDLSNKILYK--KEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNAIEGLNFGTVDKI  163 (412)
Q Consensus        86 ~~~~~~I~ln--~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~~L~~~~i~f~P~Lp~~k~~ai~~l~~g~~~KV  163 (412)
                      +. ..+|+++  ++|++|.. ++++|+  +.+|+++.||+||+|+|+..+.+.+....|++|+...++++++.|.++.+|
T Consensus       226 l~-~~~i~~~~~~~V~~I~~-~~~~v~--~~~G~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~~~~~l~~l~y~s~~~v  301 (484)
T 4dsg_A          226 LP-SEKLTFNSGFQAIAIDA-DAKTIT--FSNGEVVSYDYLISTVPFDNLLRMTKGTGFKGYDEWPAIADKMVYSSTNVI  301 (484)
T ss_dssp             SC-GGGEEECGGGCEEEEET-TTTEEE--ETTSCEEECSEEEECSCHHHHHHHEECSSCTTGGGHHHHHHHCCEEEEEEE
T ss_pred             hh-hCeEEECCCceeEEEEe-cCCEEE--ECCCCEEECCEEEECCCHHHHHHHhhccCCCCCHHHHHHHhCCCcCceEEE
Confidence            52 2379999  56999998 777654  578889999999999999999883111234588888899999999999999


Q ss_pred             EEEcCCCccCCCCCceeEeecCCCccccccccccCCCCCccccccceeecCCCCcEEEEEecccchHHHhcCCHHHHHHH
Q psy10795        164 FIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWIAGPTARYMETLPMAVLQAD  243 (412)
Q Consensus       164 ~l~f~~~fW~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~w~~~~~~~~~~~~~~~vL~~~~~g~~a~~~~~lsdeel~~~  243 (412)
                      .+.|+++.-.+-..+++++.++.+..  ...      ..+.+..... ..+++..+++..+...   ..+.++|+++++.
T Consensus       302 ~l~~~~~~~~~~~~~~~i~vp~~~~~--~~r------i~~~s~~~p~-~ap~g~~~l~~e~~~~---~~~~~~d~~l~~~  369 (484)
T 4dsg_A          302 GIGVKGTPPPHLKTACWLYFPEDTSP--FYR------ATVFSNYSKY-NVPEGHWSLMLEVSES---KYKPVNHSTLIED  369 (484)
T ss_dssp             EEEEESCCCGGGTTCCEEECCSTTCS--CSE------EECGGGTCGG-GSCTTEEEEEEEEEEB---TTBCCCTTSHHHH
T ss_pred             EEEEcCCCcccCCCCeEEEEEcCCCe--EEE------EEeecCCCcc-cCCCCeEEEEEEEecC---cCCcCCHHHHHHH
Confidence            99999863111022344444444321  000      0111111111 1133334555555432   3557899999999


Q ss_pred             HHHHHHHHhCCCCCCCCC-cEEEeecCCCCCCCccccCCCCCccccccccCcccccCCCCCCCCCccccccCCCccCCCC
Q psy10795        244 IMRLFRHFLGGAYIIPEP-IRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSD  322 (412)
Q Consensus       244 ~l~~L~~~~g~~~~~~~~-~~~~~~~W~~dp~~~G~ys~~~pg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~~  322 (412)
                      ++++|.++.+.  ....+ ....+++|.      .+|..+.+|                               |   . 
T Consensus       370 a~~~L~~~~~~--~~~~~~~~~~v~r~~------~~yP~y~~~-------------------------------~---~-  406 (484)
T 4dsg_A          370 CIVGCLASNLL--LPEDLLVSKWHYRIE------KGYPTPFIG-------------------------------R---N-  406 (484)
T ss_dssp             HHHHHHHTTSC--CTTCCEEEEEEEEEE------EEEECCBTT-------------------------------H---H-
T ss_pred             HHHHHHHcCCC--CccceEEEEEEEEeC------ccccCCCcc-------------------------------H---H-
Confidence            99999998653  11123 344677886      345555322                               1   0 


Q ss_pred             ccCcchHHhccccccCCCCceEEEecccccCcCc-ccchhhhhccHHHHHHHH
Q psy10795        323 RLNTSAADLAAPVINREGRPVLLFAGEATSPHHY-GTVNGAVESGARETANAI  374 (412)
Q Consensus       323 ~~~~~~~~l~~p~~~~~~~~~l~fAGe~t~~~~~-g~~eGA~~SG~raA~~i~  374 (412)
                         ...+.+...+..   . +|+|+|..-...+. .-|++|+.||.+||++|+
T Consensus       407 ---~~~~~~~~~l~~---~-~l~~~Gr~g~~~y~v~~~d~~i~sg~~aa~~i~  452 (484)
T 4dsg_A          407 ---NLLEKAQPELMS---R-CIYSRGRFGAWRYEVGNQDHSFMQGVEAIDHVL  452 (484)
T ss_dssp             ---HHHHHHHHHHHH---T-TEEECSTTTTCCGGGCSHHHHHHHHHHHHHHHT
T ss_pred             ---HHHHHHHHHHHh---C-CcEeecCCcccccCCCChHHHHHHHHHHHHHHH
Confidence               112222222221   1 59999996655431 359999999999999997

>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*

Probab=99.45  E-value=3.9e-13  Score=134.29  Aligned_cols=205  Identities=9%  Similarity=0.081  Sum_probs=124.5

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChhhhhcCcccccCCCcHHHHHHHhcCCCccee-EEEEEc
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNAIEGLNFGTVD-KIFIRF  167 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~~L~~~~i~f~P~Lp~~k~~ai~~l~~g~~~-KV~l~f  167 (412)
                      +.+|++|++|++|.. ++++|.|++.+| ++.||+||+|+|+.++.+    +.|++|+.+ +.+.++.+.+.. ++.+..
T Consensus       217 ~~~v~~~~~V~~i~~-~~~~v~v~~~~g-~~~ad~Vv~a~~~~~~~~----~l~~~~~~~-~~~~~~~~~~~~~~~~~~~  289 (424)
T 2b9w_A          217 EHPAERNVDITRITR-EDGKVHIHTTDW-DRESDVLVLTVPLEKFLD----YSDADDDER-EYFSKIIHQQYMVDACLVK  289 (424)
T ss_dssp             SSCCBCSCCEEEEEC-CTTCEEEEESSC-EEEESEEEECSCHHHHTT----SBCCCHHHH-HHHTTCEEEEEEEEEEEES
T ss_pred             cceEEcCCEEEEEEE-ECCEEEEEECCC-eEEcCEEEECCCHHHHhh----ccCCCHHHH-HHHhcCCcceeEEEEEEec
Confidence            457999999999998 788899999888 589999999999998865    346666654 366778776643 323332


Q ss_pred             CCCccCCCCCceeEeecCCCccccccccccCCCCCccccccceeecCC-CCcEEEEEecccchHHHhcCCHHHHHHHHHH
Q psy10795        168 PAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAE-DPLTLLGWIAGPTARYMETLPMAVLQADIMR  246 (412)
Q Consensus       168 ~~~fW~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~w~~~~~~~~~~~~-~~~vL~~~~~g~~a~~~~~lsdeel~~~~l~  246 (412)
                        .++.  .  .+++ ++.......|      ...|     +....++ ...+|++|+.+.. ..+..++++++.+.+++
T Consensus       290 --~~~~--~--~~~~-~~~~~~~~~g------~~~~-----~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~v~~  350 (424)
T 2b9w_A          290 --EYPT--I--SGYV-PDNMRPERLG------HVMV-----YYHRWADDPHQIITTYLLRNH-PDYADKTQEECRQMVLD  350 (424)
T ss_dssp             --SCCS--S--EEEC-GGGGSGGGTT------SCCE-----EEECCTTCTTSCEEEEEECCB-TTBCCCCHHHHHHHHHH
T ss_pred             --cCCc--c--cccc-cCCCCCcCCC------cceE-----EeeecCCCCceEEEEEeccCC-CcccccChHHHHHHHHH
Confidence              2311  1  1222 2211000011      0112     1112222 2357888887643 45667889999999999


Q ss_pred             HHHHHhCCCCCCCCCcEEEeecCCCCCCCccccCCCCCccccccccCcccccCCCCCCCCCccccccCCCccCCCCccCc
Q psy10795        247 LFRHFLGGAYIIPEPIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLNT  326 (412)
Q Consensus       247 ~L~~~~g~~~~~~~~~~~~~~~W~~dp~~~G~ys~~~pg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~  326 (412)
                      .|.+ ++.  +.  +......+|...|.       +.+.+.                          ..|          
T Consensus       351 ~l~~-l~~--~~--~~~~~~~~w~~~p~-------~~~~~~--------------------------~~G----------  382 (424)
T 2b9w_A          351 DMET-FGH--PV--EKIIEEQTWYYFPH-------VSSEDY--------------------------KAG----------  382 (424)
T ss_dssp             HHHH-TTC--CE--EEEEEEEEEEEEEE-------CCHHHH--------------------------HTT----------
T ss_pred             HHHH-cCC--cc--cccccccceeeeec-------cCHHHH--------------------------hcc----------
Confidence            9998 552  21  22223446653221       111110                          111          


Q ss_pred             chHHhccccccCCCCceEEEecccccCcCcccchhhhhccHHHHHHHH
Q psy10795        327 SAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAI  374 (412)
Q Consensus       327 ~~~~l~~p~~~~~~~~~l~fAGe~t~~~~~g~~eGA~~SG~raA~~i~  374 (412)
                      ....+...    .+.+++||||++++.   |++|+|+.||.+||++|+
T Consensus       383 ~~~~~~~~----~~~~~l~~aG~~~~~---g~~e~a~~Sg~~aA~~~l  423 (424)
T 2b9w_A          383 WYEKVEGM----QGRRNTFYAGEIMSF---GNFDEVCHYSKDLVTRFF  423 (424)
T ss_dssp             HHHHHHHT----TTGGGEEECSGGGSC---SSHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHH----hCCCCceEecccccc---ccHHHHHHHHHHHHHHhc
Confidence            12222221    122489999999974   889999999999999985

>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}

Probab=99.44  E-value=1.5e-12  Score=130.06  Aligned_cols=200  Identities=12%  Similarity=0.029  Sum_probs=126.5

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChhhhhcCccccc-CCCcHHHHHHHhcCCCcceeEEEEEc
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFV-PSLPAQKLNAIEGLNFGTVDKIFIRF  167 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~~L~~~~i~f~-P~Lp~~k~~ai~~l~~g~~~KV~l~f  167 (412)
                      |.+|++|++|++|.. ++++| | +.+|+++.||+||+|+|+..+.+   .+. +.+|+...+.++++.+.++.+|.+.+
T Consensus       203 G~~i~~~~~V~~i~~-~~~~v-V-~~~g~~~~ad~Vv~a~~~~~~~~---ll~~~~~~~~~~~~~~~~~~~~~~~v~l~~  276 (421)
T 3nrn_A          203 KGKILTRKEVVEINI-EEKKV-Y-TRDNEEYSFDVAISNVGVRETVK---LIGRDYFDRDYLKQVDSIEPSEGIKFNLAV  276 (421)
T ss_dssp             TCEEESSCCEEEEET-TTTEE-E-ETTCCEEECSEEEECSCHHHHHH---HHCGGGSCHHHHHHHHTCCCCCEEEEEEEE
T ss_pred             CCEEEcCCeEEEEEE-ECCEE-E-EeCCcEEEeCEEEECCCHHHHHH---hcCcccCCHHHHHHHhCCCCCceEEEEEEE
Confidence            679999999999998 78888 6 45677999999999999999987   232 45787788899999999999999999


Q ss_pred             CCCccCCCCCceeEeecCCCccccccccccCCCCCccccccceeecCCCCcEEEEEecccchHHHhcCCHHHHHHHHHHH
Q psy10795        168 PAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWIAGPTARYMETLPMAVLQADIMRL  247 (412)
Q Consensus       168 ~~~fW~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~w~~~~~~~~~~~~~~~vL~~~~~g~~a~~~~~lsdeel~~~~l~~  247 (412)
                      +++....  .++ ++.++.+   +.+       ..+.+..... ..+.+..++.++..-      ...++++..+.++++
T Consensus       277 ~~~~~~~--~~~-~~~~~~~---~~~-------i~~~s~~~p~-~ap~G~~~~~~~~~~------~~~~~~~~~~~~~~~  336 (421)
T 3nrn_A          277 PGEPRIG--NTI-VFTPGLM---ING-------FNEPSALDKS-LAREGYTLIMAHMAL------KNGNVKKAIEKGWEE  336 (421)
T ss_dssp             ESSCSSC--SSE-EECTTSS---SCE-------EECGGGTCGG-GSCTTEEEEEEEEEC------TTCCHHHHHHHHHHH
T ss_pred             cCCcccC--CeE-EEcCCcc---eee-------EeccCCCCCC-cCCCCceEEEEEEee------ccccHHHHHHHHHHH
Confidence            9884322  222 2212211   111       1122211111 123343444444321      123445668999999


Q ss_pred             HHHHhCCCCCCCCCcEEEeecCCCCCCCccccCCCCCccccccccCcccccCCCCCCCCCccccccCCCccCCCCccCcc
Q psy10795        248 FRHFLGGAYIIPEPIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLNTS  327 (412)
Q Consensus       248 L~~~~g~~~~~~~~~~~~~~~W~~dp~~~G~ys~~~pg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~  327 (412)
                      |++++|.    .++  ..+++|..      ++..+.+                             ..|    .     .
T Consensus       337 L~~~~p~----~~~--~~~~~~~~------~~p~~~~-----------------------------~~~----~-----~  366 (421)
T 3nrn_A          337 LLEIFPE----GEP--LLAQVYRD------GNPVNRT-----------------------------RAG----L-----H  366 (421)
T ss_dssp             HHHHCTT----CEE--EEEEEC---------------------------------------------------------C
T ss_pred             HHHHcCC----CeE--EEeeeccC------CCCcccc-----------------------------cCC----C-----C
Confidence            9999982    133  35567753      1211100                             011    0     0


Q ss_pred             hHHhccccccCCCCceEEEecccccCcCcccchhhhhccHHHHHHH
Q psy10795        328 AADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANA  373 (412)
Q Consensus       328 ~~~l~~p~~~~~~~~~l~fAGe~t~~~~~g~~eGA~~SG~raA~~i  373 (412)
                      .+  ..|       ++||+|||++.+.+.-+|+||+.||.+||++|
T Consensus       367 ~~--~~~-------~gl~laGd~~~~~~g~~~~ga~~sg~~aA~~l  403 (421)
T 3nrn_A          367 IE--WPL-------NEVLVVGDGYRPPGGIEVDGIALGVMKALEKL  403 (421)
T ss_dssp             CC--CCC-------SSEEECSTTCCCTTCCHHHHHHHHHHHHHHHT
T ss_pred             CC--CCC-------CcEEEECCcccCCCceeeehHHHHHHHHHHHh
Confidence            01  222       38999999999853346799999999999998

>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}

Probab=99.21  E-value=5.7e-11  Score=121.14  Aligned_cols=92  Identities=10%  Similarity=0.143  Sum_probs=51.3

Q ss_pred             eeecCCcCCC-CCCcEEcCCeEEEEEecCCCcEE-EEeCCCcEEEeCEEEEeCChhhhhcCcccccCCCcHHHHHHHhcC
Q psy10795         78 LLVSGQTPVD-LSNKILYKKEVNKIDWEYQNGAA-VSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNAIEGL  155 (412)
Q Consensus        78 l~~~~~~~~~-~~~~I~ln~~V~~I~~~~~~~V~-V~~~~G~~~~ad~VIvTvP~~~L~~~~i~f~P~Lp~~k~~ai~~l  155 (412)
                      +..++++.+. .|++|++|++|++|.. ++++++ |++.+|+++.||+||+++++..+...++.-. +++....+.+++.
T Consensus       223 l~~aL~~~~~~~Gg~I~~~~~V~~I~~-~~~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll~~~-~~~~~~~~~~~~~  300 (501)
T 4dgk_A          223 LVQGMIKLFQDLGGEVVLNARVSHMET-TGNKIEAVHLEDGRRFLTQAVASNADVVHTYRDLLSQH-PAAVKQSNKLQTK  300 (501)
T ss_dssp             HHHHHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEETTSCEEECSCEEECCC--------------------------
T ss_pred             hHHHHHHHHHHhCCceeeecceeEEEe-eCCeEEEEEecCCcEEEcCEEEECCCHHHHHHHhcccc-ccchhhhhhhhcc
Confidence            3334433333 3789999999999999 778876 8899999999999999998876655322211 3444455566666


Q ss_pred             CCc-ceeEEEEEcCCCc
Q psy10795        156 NFG-TVDKIFIRFPAKW  171 (412)
Q Consensus       156 ~~g-~~~KV~l~f~~~f  171 (412)
                      .++ +..++++.++.+.
T Consensus       301 ~~~~s~~~~~~~l~~~~  317 (501)
T 4dgk_A          301 RMSNSLFVLYFGLNHHH  317 (501)
T ss_dssp             --CCEEEEEEEEESSCC
T ss_pred             ccCCceeEEEecccCCc
Confidence            664 4677888888764

>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}

Probab=97.86  E-value=1.3e-06  Score=86.62  Aligned_cols=70  Identities=14%  Similarity=0.013  Sum_probs=52.4

Q ss_pred             ceeeecCCcCCCCCCcEEcCCeEEEEEecCCCcEEEEeCCCcEE-EeCEEEEeCChhhhhcCcccccCCCcHHHHHHHhc
Q psy10795         76 LTLLVSGQTPVDLSNKILYKKEVNKIDWEYQNGAAVSCSDGSVY-TAYKIIITVPLGVLKSKLITFVPSLPAQKLNAIEG  154 (412)
Q Consensus        76 ~vl~~~~~~~~~~~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~-~ad~VIvTvP~~~L~~~~i~f~P~Lp~~k~~ai~~  154 (412)
                      ..++.++++.+  +.+|+||++|++|.. .   |     +  ++ .||+||+|+|+.++.+.              .+.+
T Consensus       205 ~~l~~~l~~~~--g~~I~l~~~V~~I~~-~---v-----~--~~~~aD~VI~t~p~~~l~~~--------------~l~~  257 (399)
T 1v0j_A          205 TAWLQNMAADH--RIEVRLNTDWFDVRG-Q---L-----R--PGSPAAPVVYTGPLDRYFDY--------------AEGR  257 (399)
T ss_dssp             HHHHHHHTCST--TEEEECSCCHHHHHH-H---H-----T--TTSTTCCEEECSCHHHHTTT--------------TTCC
T ss_pred             HHHHHHHHhcC--CeEEEECCchhhhhh-h---h-----h--hcccCCEEEECCcHHHHHhh--------------hhCC
Confidence            35555666544  678999999999976 3   3     1  34 69999999999998872              2457


Q ss_pred             CCCcceeEEEEEcCCCcc
Q psy10795        155 LNFGTVDKIFIRFPAKWW  172 (412)
Q Consensus       155 l~~g~~~KV~l~f~~~fW  172 (412)
                      +.|.+...+.+.++.+.+
T Consensus       258 l~y~s~~~~~~~~~~~~~  275 (399)
T 1v0j_A          258 LGWRTLDFEVEVLPIGDF  275 (399)
T ss_dssp             CCEEEEEEEEEEESSSCS
T ss_pred             CCcceEEEEEEEEccccC
Confidence            889988889999987643

>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}

Probab=97.77  E-value=0.00065  Score=60.98  Aligned_cols=209  Identities=12%  Similarity=0.120  Sum_probs=106.6

Q ss_pred             cEEcCCeEEEEEecCCCcEEEEeCCCcE-EEeCEEEEeCChhhhhcCcccccCCCcHHHHHHHhcCCCcceeEEEEEcCC
Q psy10795         91 KILYKKEVNKIDWEYQNGAAVSCSDGSV-YTAYKIIITVPLGVLKSKLITFVPSLPAQKLNAIEGLNFGTVDKIFIRFPA  169 (412)
Q Consensus        91 ~I~ln~~V~~I~~~~~~~V~V~~~~G~~-~~ad~VIvTvP~~~L~~~~i~f~P~Lp~~k~~ai~~l~~g~~~KV~l~f~~  169 (412)
                      .+........+.. ..+...+....+.. .....++++.........   . . .......................+..
T Consensus       121 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (336)
T 3kkj_A          121 PVSFSCRITEVFR-GEEHWNLLDAEGQNHGPFSHVIIATPAPQASTL---L-A-AAPKLASVVAGVKMDPTWAVALAFET  194 (336)
T ss_dssp             CEECSCCEEEEEE-CSSCEEEEETTSCEEEEESCEEECSCHHHHGGG---G-T-TCHHHHHHHTTCCEEEEEEEEEEESS
T ss_pred             eeecceeeccccc-ccccccccccccccccccccceeccccchhhhh---h-c-ccccccccccccccccchhhhhcccc
Confidence            4566666666666 56666666666544 345555555555544431   1 1 12223333444445555555555555


Q ss_pred             CccCCCCCceeEeecCCCccccccccccCCCCCccccccceeecCCCCcEEEEEecccchHHHhcCCHHHHHHHHHHHHH
Q psy10795        170 KWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWIAGPTARYMETLPMAVLQADIMRLFR  249 (412)
Q Consensus       170 ~fW~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~w~~~~~~~~~~~~~~~vL~~~~~g~~a~~~~~lsdeel~~~~l~~L~  249 (412)
                      ..+...  ..... ....             ..+...................................+..+.....+.
T Consensus       195 ~~~~~~--~~~~~-~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (336)
T 3kkj_A          195 PLQTPM--QGCFV-QDSP-------------LDWLARNRSKPERDDTLDTWILHATSQWSRQNLDASREQVIEHLHGAFA  258 (336)
T ss_dssp             CCSCCC--CEEEE-CSSS-------------EEEEEEGGGSTTCCCSSEEEEEEECHHHHHHTTTSCHHHHHHHHHHHHH
T ss_pred             cccccc--ccccc-cccc-------------cccccccccccccccccccceeccccccccccccccchhhhhhhhhhhh
Confidence            433221  11000 0000             0000000000000111112223333333444455666777777777777


Q ss_pred             HHhCCCCCCCCCcEEEeecCCCCCCCccccCCCCCccccccccCcccccCCCCCCCCCccccccCCCccCCCCccCcchH
Q psy10795        250 HFLGGAYIIPEPIRIVRSAWSINPHFRGSYSHHGPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLNTSAA  329 (412)
Q Consensus       250 ~~~g~~~~~~~~~~~~~~~W~~dp~~~G~ys~~~pg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~~~  329 (412)
                      ..++.  ..+.+.....++|.        |++...                             ...           ..
T Consensus       259 ~~~~~--~~~~~~~~~~~~w~--------~a~~~~-----------------------------~~~-----------~~  288 (336)
T 3kkj_A          259 ELIDC--TMPAPVFSLAHRWL--------YARPAG-----------------------------AHE-----------WG  288 (336)
T ss_dssp             TTCSS--CCCCCSEEEEEEEE--------EEEESS-----------------------------CCC-----------CS
T ss_pred             hhccC--CcCcchheecccee--------eccccc-----------------------------ccC-----------cc
Confidence            77764  45677778888885        222200                             000           00


Q ss_pred             HhccccccCCCCceEEEecccccCcCcccchhhhhccHHHHHHHHHHHHhc
Q psy10795        330 DLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVYLRRE  380 (412)
Q Consensus       330 ~l~~p~~~~~~~~~l~fAGe~t~~~~~g~~eGA~~SG~raA~~i~~~l~~~  380 (412)
                      .+..+.      +|||+|||++..   +.|++|+.||.+||+.|++.|+..
T Consensus       289 ~~~~~~------~~v~l~GDa~~g---~gv~~A~~sG~~aA~~I~~~L~~e  330 (336)
T 3kkj_A          289 ALSDAD------LGIYVCGDWCLS---GRVEGAWLSGQEAARRLLEHLQLE  330 (336)
T ss_dssp             SEEETT------TTEEECCGGGTT---SSHHHHHHHHHHHHHHHHHHTTC-
T ss_pred             ceeeCC------CCEEEEecccCC---cCHHHHHHHHHHHHHHHHHHhhcc
Confidence            111122      489999999876   569999999999999999998764

>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}

Probab=96.74  E-value=0.00069  Score=55.78  Aligned_cols=31  Identities=13%  Similarity=0.439  Sum_probs=28.2

Q ss_pred             hhHHHHhhcCCccccceEEEEcCCCCccCCC
Q psy10795          4 IALGTLLQGLNFGTVDKIFIRFPAKWWKDGC   34 (412)
Q Consensus         4 ~~~~~ai~~lgfgt~~Kifl~f~~~~w~~~~   34 (412)
                      ..|.+||+++++|..+|||++|.+|||..+.
T Consensus        31 ~~k~~Ai~~l~~g~~~Kv~l~f~~~FW~~~~   61 (130)
T 2e1m_B           31 YKKRRAVIETHYDQATKVLLEFSRRWWEFTE   61 (130)
T ss_dssp             HHHHHHHHHCCEECEEEEEEEESSCGGGCCH
T ss_pred             HHHHHHHHhCCCcceeEEEEEECCCCCCCCC
Confidence            3689999999999999999999999998754

>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}

Probab=94.93  E-value=0.15  Score=51.77  Aligned_cols=42  Identities=7%  Similarity=-0.040  Sum_probs=35.9

Q ss_pred             CCcEEcCCeEEEEEecCCC----cEEEEeCCC---cEEEeCEEEEeCChh
Q psy10795         89 SNKILYKKEVNKIDWEYQN----GAAVSCSDG---SVYTAYKIIITVPLG  131 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~----~V~V~~~~G---~~~~ad~VIvTvP~~  131 (412)
                      +.+|+++++|++|.. +++    +|+|++.++   .+++||+||.|.=..
T Consensus       134 gv~i~~~~~v~~i~~-~~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~  182 (535)
T 3ihg_A          134 GGAIRFGTRLLSFRQ-HDDDAGAGVTARLAGPDGEYDLRAGYLVGADGNR  182 (535)
T ss_dssp             TCEEESSCEEEEEEE-ECGGGCSEEEEEEEETTEEEEEEEEEEEECCCTT
T ss_pred             CCEEEeCCEEEEEEE-CCCCccccEEEEEEcCCCeEEEEeCEEEECCCCc
Confidence            568999999999998 777    888888776   689999999997664

>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*

Probab=94.54  E-value=0.022  Score=57.74  Aligned_cols=40  Identities=13%  Similarity=0.364  Sum_probs=35.6

Q ss_pred             hHHHHhhcCCccccceEEEEcCCCCccCCCcceEeeeccC
Q psy10795          5 ALGTLLQGLNFGTVDKIFIRFPAKWWKDGCQGFNLYWTQQ   44 (412)
Q Consensus         5 ~~~~ai~~lgfgt~~Kifl~f~~~~w~~~~~~~~~~W~~~   44 (412)
                      .|.++|+++++|+++||+|+|+++||..+...|..+|...
T Consensus       281 ~~~~ai~~~~~~~~~Kv~l~f~~~fW~~~~~~~~~~~~~~  320 (516)
T 1rsg_A          281 VIQDAFDKIHFGALGKVIFEFEECCWSNESSKIVTLANST  320 (516)
T ss_dssp             HHHHHTTSSCCCCCEEEEEEESSCCSCCSCSEEEECCCCC
T ss_pred             HHHHHHHhCCCCcceEEEEEeCCCCCCCCCCcEEEeCCCC
Confidence            5889999999999999999999999988877788887643

>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A

Probab=93.66  E-value=0.038  Score=54.73  Aligned_cols=43  Identities=16%  Similarity=0.111  Sum_probs=36.2

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChhh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGV  132 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~~  132 (412)
                      |++|++|++|++|.. .+++|.+...+|+++.||+||+|+|+..
T Consensus       248 G~~i~~~~~V~~I~~-~~~~v~~v~~~g~~~~ad~VV~a~~~~~  290 (433)
T 1d5t_A          248 GGTYMLNKPVDDIIM-ENGKVVGVKSEGEVARCKQLICDPSYVP  290 (433)
T ss_dssp             TCCCBCSCCCCEEEE-ETTEEEEEEETTEEEECSEEEECGGGCG
T ss_pred             CCEEECCCEEEEEEE-eCCEEEEEEECCeEEECCEEEECCCCCc
Confidence            778999999999998 7777764445788999999999998864

>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A

Probab=93.10  E-value=0.053  Score=56.85  Aligned_cols=38  Identities=18%  Similarity=0.400  Sum_probs=31.9

Q ss_pred             hHHHHhhcCCccccceEEEEcCCCCccCCCcceEeeec
Q psy10795          5 ALGTLLQGLNFGTVDKIFIRFPAKWWKDGCQGFNLYWT   42 (412)
Q Consensus         5 ~~~~ai~~lgfgt~~Kifl~f~~~~w~~~~~~~~~~W~   42 (412)
                      .|.+||+++++|+++||+|+|+++||..+...+..++.
T Consensus       475 ~k~~Ai~~l~~g~~~KV~l~f~~~fW~~~~~~~G~l~~  512 (662)
T 2z3y_A          475 WKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGS  512 (662)
T ss_dssp             HHHHHHHHSEECCCEEEEEECSSCCSCTTCSEEEECCS
T ss_pred             HHHHHHHhCCccceeEEEEEcCcccccCCCCceeeecC
Confidence            58899999999999999999999999766555555543

>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*

Probab=92.43  E-value=0.13  Score=50.61  Aligned_cols=43  Identities=14%  Similarity=0.220  Sum_probs=38.5

Q ss_pred             CCcEEcCC---eEEEEEecCCCcEE-EEeCCCcEEEeCEEEEeCChhh
Q psy10795         89 SNKILYKK---EVNKIDWEYQNGAA-VSCSDGSVYTAYKIIITVPLGV  132 (412)
Q Consensus        89 ~~~I~ln~---~V~~I~~~~~~~V~-V~~~~G~~~~ad~VIvTvP~~~  132 (412)
                      |.+|++++   +|++|.. ++++|. |++.+|+++.||+||+|+-...
T Consensus       175 Gv~i~~~t~~~~V~~i~~-~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s  221 (438)
T 3dje_A          175 GVKFVTGTPQGRVVTLIF-ENNDVKGAVTADGKIWRAERTFLCAGASA  221 (438)
T ss_dssp             TCEEEESTTTTCEEEEEE-ETTEEEEEEETTTEEEECSEEEECCGGGG
T ss_pred             CCEEEeCCcCceEEEEEe-cCCeEEEEEECCCCEEECCEEEECCCCCh
Confidence            67899999   9999998 778888 9999998899999999987764

>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*

Probab=92.32  E-value=0.099  Score=49.97  Aligned_cols=41  Identities=20%  Similarity=0.285  Sum_probs=36.8

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLG  131 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~  131 (412)
                      |.+|+++++|++|.. ++++|.|++.+| ++.||+||+|+-..
T Consensus       168 Gv~i~~~~~V~~i~~-~~~~~~V~t~~g-~i~a~~VV~A~G~~  208 (381)
T 3nyc_A          168 QGQVLCNHEALEIRR-VDGAWEVRCDAG-SYRAAVLVNAAGAW  208 (381)
T ss_dssp             TCEEESSCCCCEEEE-ETTEEEEECSSE-EEEESEEEECCGGG
T ss_pred             CCEEEcCCEEEEEEE-eCCeEEEEeCCC-EEEcCEEEECCChh
Confidence            678999999999998 777899999888 89999999998764

>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A

Probab=92.20  E-value=0.083  Score=56.98  Aligned_cols=38  Identities=18%  Similarity=0.400  Sum_probs=32.2

Q ss_pred             hHHHHhhcCCccccceEEEEcCCCCccCCCcceEeeec
Q psy10795          5 ALGTLLQGLNFGTVDKIFIRFPAKWWKDGCQGFNLYWT   42 (412)
Q Consensus         5 ~~~~ai~~lgfgt~~Kifl~f~~~~w~~~~~~~~~~W~   42 (412)
                      .|.+||+++++|+++||+|+|.++||..+...+.+++.
T Consensus       646 ~k~~AI~~l~~g~v~KV~L~F~~~fW~~~~~~fG~l~~  683 (852)
T 2xag_A          646 WKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGS  683 (852)
T ss_dssp             HHHHHHHHSEECCCEEEEEECSSCCSCTTCCEEEECCS
T ss_pred             HHHHHHHcCCccceEEEEEEcCCcccCCCCCeeeeecc
Confidence            47889999999999999999999999776666666554

>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}

Probab=92.19  E-value=1.4  Score=45.33  Aligned_cols=44  Identities=11%  Similarity=0.077  Sum_probs=35.2

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeC-CC--cEEEeCEEEEeCChhh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCS-DG--SVYTAYKIIITVPLGV  132 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~-~G--~~~~ad~VIvTvP~~~  132 (412)
                      +.+|+.+++|++|...+++.+.|++. +|  .++.||.||.|.-...
T Consensus       142 Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S  188 (591)
T 3i3l_A          142 GITVHEETPVTDVDLSDPDRVVLTVRRGGESVTVESDFVIDAGGSGG  188 (591)
T ss_dssp             TCEEETTCCEEEEECCSTTCEEEEEEETTEEEEEEESEEEECCGGGC
T ss_pred             CCEEEeCCEEEEEEEcCCCEEEEEEecCCceEEEEcCEEEECCCCcc
Confidence            66899999999999833566788876 67  5799999999986543

>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*

Probab=91.63  E-value=0.19  Score=52.74  Aligned_cols=42  Identities=7%  Similarity=0.081  Sum_probs=38.0

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLG  131 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~  131 (412)
                      |.+|+++++|++|.. ++++|.|++.+|.++.||+||+|+-..
T Consensus       431 Gv~i~~~t~V~~l~~-~~~~v~V~t~~G~~i~Ad~VVlAtG~~  472 (676)
T 3ps9_A          431 GLQIYYQYQLQNFSR-KDDCWLLNFAGDQQATHSVVVLANGHQ  472 (676)
T ss_dssp             TCEEEESCCEEEEEE-ETTEEEEEETTSCEEEESEEEECCGGG
T ss_pred             CCEEEeCCeeeEEEE-eCCeEEEEECCCCEEECCEEEECCCcc
Confidence            678999999999998 778899999888899999999998765

>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2

Probab=91.47  E-value=0.26  Score=47.75  Aligned_cols=42  Identities=14%  Similarity=0.002  Sum_probs=37.7

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLG  131 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~  131 (412)
                      +.+|+++++|++|.. ++++|+|++.+|++++||.||.|.-..
T Consensus       111 ~~~i~~~~~v~~i~~-~~~~v~v~~~~g~~~~ad~vV~AdG~~  152 (397)
T 2vou_A          111 PERYHTSKCLVGLSQ-DSETVQMRFSDGTKAEANWVIGADGGA  152 (397)
T ss_dssp             STTEETTCCEEEEEE-CSSCEEEEETTSCEEEESEEEECCCTT
T ss_pred             CcEEEcCCEEEEEEe-cCCEEEEEECCCCEEECCEEEECCCcc
Confidence            567999999999998 788899999999999999999997654

>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*

Probab=91.45  E-value=0.0036  Score=61.59  Aligned_cols=127  Identities=9%  Similarity=0.059  Sum_probs=81.0

Q ss_pred             HhhcCCccccceEEEEcCCCCccCCCcceEeeeccCCcccccccccccCCCCceeeeeeeEeccCCcceeeecCCcCCCC
Q psy10795          9 LLQGLNFGTVDKIFIRFPAKWWKDGCQGFNLYWTQQDKTDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLVSGQTPVDL   88 (412)
Q Consensus         9 ai~~lgfgt~~Kifl~f~~~~w~~~~~~~~~~W~~~d~~~l~~~~~~~~~~~W~~~i~gf~~v~~~p~vl~~~~~~~~~~   88 (412)
                      +++++|=...+++|..|.++.|..++..+...|-. +.. ....   . ......+....+... ....+++++++..  
T Consensus       163 ~~~~~G~~~~e~~~~py~~k~~~~~~~~Lsa~~~~-Rvp-~~~~---~-d~~yf~~~~qg~P~g-Gy~~l~e~l~~~~--  233 (397)
T 3hdq_A          163 VVSKVGRDLYNKFFRGYTRKQWGLDPSELDASVTA-RVP-TRTN---R-DNRYFADTYQAMPLH-GYTRMFQNMLSSP--  233 (397)
T ss_dssp             HHHHHHHHHHHHHTHHHHHHHHSSCGGGSBTTTGG-GSC-CCSS---C-CCBSCCCSEEEEETT-CHHHHHHHHTCST--
T ss_pred             HHHhcCHHHHHHHHHHHhCchhCCCHHHHHHHHHH-hcC-cccc---c-CccchhhhheeccCC-CHHHHHHHHHhcc--
Confidence            34556666677888899999999999999988875 221 1110   0 000001111112222 2235666666543  


Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChhhhhcCcccccCCCcHHHHHHHhcCCCcceeEEEEEcC
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNAIEGLNFGTVDKIFIRFP  168 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~~L~~~~i~f~P~Lp~~k~~ai~~l~~g~~~KV~l~f~  168 (412)
                      +.+|+||++|++|              +.++.+|+||+|+|+..+-..              .+.+|.|.+..-+.+.++
T Consensus       234 g~~V~l~~~v~~~--------------~~~~~~d~vI~T~P~d~~~~~--------------~~g~L~yrsl~~~~~~~~  285 (397)
T 3hdq_A          234 NIKVMLNTDYREI--------------ADFIPFQHMIYTGPVDAFFDF--------------CYGKLPYRSLEFRHETHD  285 (397)
T ss_dssp             TEEEEESCCGGGT--------------TTTSCEEEEEECSCHHHHTTT--------------TTCCCCEEEEEEEEEEES
T ss_pred             CCEEEECCeEEec--------------cccccCCEEEEcCCHHHHHHH--------------hcCCCCCceEEEEEEEec
Confidence            7789999999733              224569999999999887541              245688999999999998


Q ss_pred             CCcc
Q psy10795        169 AKWW  172 (412)
Q Consensus       169 ~~fW  172 (412)
                      .+.+
T Consensus       286 ~~~~  289 (397)
T 3hdq_A          286 TEQL  289 (397)
T ss_dssp             SSCS
T ss_pred             cccC
Confidence            7643

>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}

Probab=91.36  E-value=0.25  Score=46.79  Aligned_cols=42  Identities=7%  Similarity=0.091  Sum_probs=36.3

Q ss_pred             CCcEEcCCeEEEEEecCCCc-EEEEeCCC--cEEEeCEEEEeCChh
Q psy10795         89 SNKILYKKEVNKIDWEYQNG-AAVSCSDG--SVYTAYKIIITVPLG  131 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~-V~V~~~~G--~~~~ad~VIvTvP~~  131 (412)
                      +.+|+++++|++|.. ++++ +.|++.+|  .++.||+||+|+-..
T Consensus       164 Gv~i~~~~~v~~i~~-~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~  208 (369)
T 3dme_A          164 GAQLVFHTPLIAGRV-RPEGGFELDFGGAEPMTLSCRVLINAAGLH  208 (369)
T ss_dssp             TCEEECSCCEEEEEE-CTTSSEEEEECTTSCEEEEEEEEEECCGGG
T ss_pred             CCEEECCCEEEEEEE-cCCceEEEEECCCceeEEEeCEEEECCCcc
Confidence            678999999999998 6555 88999888  489999999999765

>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}

Probab=91.13  E-value=0.31  Score=46.90  Aligned_cols=43  Identities=16%  Similarity=0.154  Sum_probs=36.5

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLG  131 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~  131 (412)
                      +++|+++++|++++..++++|+|++.||++++||.||-|==..
T Consensus       123 ~~~v~~~~~v~~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~  165 (412)
T 4hb9_A          123 ANTIQWNKTFVRYEHIENGGIKIFFADGSHENVDVLVGADGSN  165 (412)
T ss_dssp             TTTEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECCCTT
T ss_pred             cceEEEEEEEEeeeEcCCCeEEEEECCCCEEEeeEEEECCCCC
Confidence            5679999999999984556799999999999999999885543

>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*

Probab=90.92  E-value=0.24  Score=52.13  Aligned_cols=42  Identities=7%  Similarity=0.139  Sum_probs=37.2

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCc-EEEeCEEEEeCChh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGS-VYTAYKIIITVPLG  131 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~-~~~ad~VIvTvP~~  131 (412)
                      |.+|+++++|++|.. ++++|.|++.+|. ++.||.||+|+-..
T Consensus       426 Gv~i~~~t~V~~l~~-~~~~v~V~t~~G~~~i~Ad~VVlAtG~~  468 (689)
T 3pvc_A          426 GMTCHYQHELQRLKR-IDSQWQLTFGQSQAAKHHATVILATGHR  468 (689)
T ss_dssp             TCEEEESCCEEEEEE-CSSSEEEEEC-CCCCEEESEEEECCGGG
T ss_pred             CCEEEeCCeEeEEEE-eCCeEEEEeCCCcEEEECCEEEECCCcc
Confidence            678999999999999 7888999999887 89999999998776

>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*

Probab=90.81  E-value=0.15  Score=50.75  Aligned_cols=41  Identities=7%  Similarity=0.079  Sum_probs=34.4

Q ss_pred             CCcEEcCCeEEEEEecC--CCcE-EEEeCCCcEEEeCEEEEeCChh
Q psy10795         89 SNKILYKKEVNKIDWEY--QNGA-AVSCSDGSVYTAYKIIITVPLG  131 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~--~~~V-~V~~~~G~~~~ad~VIvTvP~~  131 (412)
                      |++|++|++|++|.. .  ++++ .|++ +|+++.||+||+|+++.
T Consensus       256 G~~i~~~~~V~~i~~-~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~  299 (453)
T 2bcg_G          256 GGTYMLDTPIDEVLY-KKDTGKFEGVKT-KLGTFKAPLVIADPTYF  299 (453)
T ss_dssp             TCEEECSCCCCEEEE-ETTTTEEEEEEE-TTEEEECSCEEECGGGC
T ss_pred             CCEEECCCEEEEEEE-ECCCCeEEEEEE-CCeEEECCEEEECCCcc
Confidence            789999999999998 5  6665 4666 57789999999998875

>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}

Probab=90.78  E-value=0.26  Score=49.46  Aligned_cols=43  Identities=19%  Similarity=0.281  Sum_probs=33.4

Q ss_pred             CCCcEEcCCeEEEEEecCCCc-EEEEeCCCcEEEeCEEEEeCCh
Q psy10795         88 LSNKILYKKEVNKIDWEYQNG-AAVSCSDGSVYTAYKIIITVPL  130 (412)
Q Consensus        88 ~~~~I~ln~~V~~I~~~~~~~-V~V~~~~G~~~~ad~VIvTvP~  130 (412)
                      .|++|+++++|++|..+.+++ +.|++.+|+++.||+||++...
T Consensus       269 ~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~  312 (475)
T 3p1w_A          269 NGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSY  312 (475)
T ss_dssp             C--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGG
T ss_pred             cCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCc
Confidence            378999999999998723344 4688999989999999999743

>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}

Probab=90.47  E-value=0.27  Score=48.42  Aligned_cols=41  Identities=12%  Similarity=0.220  Sum_probs=36.6

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLG  131 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~  131 (412)
                      +.+|+++++|++|.. +++++.|++.+| ++.||+||+|+-..
T Consensus       146 Gv~i~~~~~V~~i~~-~~~~~~V~~~~g-~i~ad~VIlAtG~~  186 (417)
T 3v76_A          146 GVQLRLETSIGEVER-TASGFRVTTSAG-TVDAASLVVASGGK  186 (417)
T ss_dssp             TCEEECSCCEEEEEE-ETTEEEEEETTE-EEEESEEEECCCCS
T ss_pred             CCEEEECCEEEEEEE-eCCEEEEEECCc-EEEeeEEEECCCCc
Confidence            568999999999998 777899999988 89999999998754

>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*

Probab=90.14  E-value=0.32  Score=47.23  Aligned_cols=41  Identities=20%  Similarity=0.234  Sum_probs=37.0

Q ss_pred             CcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChh
Q psy10795         90 NKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLG  131 (412)
Q Consensus        90 ~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~  131 (412)
                      .+|+++++|++|.. ++++|+|++.+|++++||.||.|.-..
T Consensus       140 ~~i~~~~~v~~i~~-~~~~v~v~~~~g~~~~a~~vV~AdG~~  180 (407)
T 3rp8_A          140 DSVQFGKRVTRCEE-DADGVTVWFTDGSSASGDLLIAADGSH  180 (407)
T ss_dssp             GGEEESCCEEEEEE-ETTEEEEEETTSCEEEESEEEECCCTT
T ss_pred             CEEEECCEEEEEEe-cCCcEEEEEcCCCEEeeCEEEECCCcC
Confidence            47999999999999 788999999999999999999997654

>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}

Probab=89.84  E-value=0.37  Score=45.89  Aligned_cols=42  Identities=26%  Similarity=0.350  Sum_probs=36.8

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChhh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGV  132 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~~  132 (412)
                      +.+|+.+++|++|.. ++++|.|++.+| ++.||+||+|+-...
T Consensus       163 G~~i~~~~~V~~i~~-~~~~~~v~~~~g-~~~a~~vV~a~G~~s  204 (372)
T 2uzz_A          163 GCAQLFNCPVTAIRH-DDDGVTIETADG-EYQAKKAIVCAGTWV  204 (372)
T ss_dssp             TCEEECSCCEEEEEE-CSSSEEEEESSC-EEEEEEEEECCGGGG
T ss_pred             CCEEEcCCEEEEEEE-cCCEEEEEECCC-eEEcCEEEEcCCccH
Confidence            678999999999998 777899999888 599999999998754

>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*

Probab=89.83  E-value=0.71  Score=48.04  Aligned_cols=67  Identities=9%  Similarity=0.058  Sum_probs=48.3

Q ss_pred             CCCcEEcCCeEEEEEecCC--CcEE-EEeCCCcEEEeCEEEEeCChhhhhcCcccccCCCcHHHHHHHhcCCCcceeEEE
Q psy10795         88 LSNKILYKKEVNKIDWEYQ--NGAA-VSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNAIEGLNFGTVDKIF  164 (412)
Q Consensus        88 ~~~~I~ln~~V~~I~~~~~--~~V~-V~~~~G~~~~ad~VIvTvP~~~L~~~~i~f~P~Lp~~k~~ai~~l~~g~~~KV~  164 (412)
                      .|+.|+|+++|++|.. ++  ++++ |.+.+|+++.||+||+.  +..+        |.   ..   ..++.++.+.+++
T Consensus       391 ~Gg~i~l~~~V~~I~~-~~~~g~v~gV~~~~Ge~i~A~~VVs~--~~~l--------p~---~~---~~~~~~~~v~R~i  453 (650)
T 1vg0_A          391 FGGIYCLRHSVQCLVV-DKESRKCKAVIDQFGQRIISKHFIIE--DSYL--------SE---NT---CSRVQYRQISRAV  453 (650)
T ss_dssp             TTCEEESSCCEEEEEE-ETTTCCEEEEEETTSCEEECSEEEEE--GGGB--------CT---TT---TTTCCCEEEEEEE
T ss_pred             cCCEEEeCCEeeEEEE-eCCCCeEEEEEeCCCCEEEcCEEEEC--hhhc--------CH---hH---hccccccceEEEE
Confidence            3889999999999988 55  5564 44578999999999983  2222        21   11   1234578899999


Q ss_pred             EEcCCCc
Q psy10795        165 IRFPAKW  171 (412)
Q Consensus       165 l~f~~~f  171 (412)
                      +.++++.
T Consensus       454 ~i~~~pi  460 (650)
T 1vg0_A          454 LITDGSV  460 (650)
T ss_dssp             EEESSCS
T ss_pred             EEecCCC
Confidence            9999875

>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*

Probab=89.70  E-value=0.36  Score=46.75  Aligned_cols=42  Identities=7%  Similarity=0.065  Sum_probs=37.6

Q ss_pred             CcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChhh
Q psy10795         90 NKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGV  132 (412)
Q Consensus        90 ~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~~  132 (412)
                      .+|+++++|++|+. ++++|+|++.+|++++||.||.|.-...
T Consensus       141 ~~i~~~~~v~~i~~-~~~~v~v~~~~g~~~~ad~vV~AdG~~S  182 (398)
T 2xdo_A          141 DTVIWDRKLVMLEP-GKKKWTLTFENKPSETADLVILANGGMS  182 (398)
T ss_dssp             TSEEESCCEEEEEE-CSSSEEEEETTSCCEEESEEEECSCTTC
T ss_pred             CEEEECCEEEEEEE-CCCEEEEEECCCcEEecCEEEECCCcch
Confidence            47999999999998 7788999999998999999999987654

>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*

Probab=89.28  E-value=0.39  Score=46.34  Aligned_cols=41  Identities=17%  Similarity=0.227  Sum_probs=35.4

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLG  131 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~  131 (412)
                      +.+|+++++|++|.. ++++|.|++.+| ++.||+||+|.-..
T Consensus       167 Gv~i~~~~~V~~i~~-~~~~v~v~t~~g-~i~a~~VV~A~G~~  207 (397)
T 2oln_A          167 GATLRAGETVTELVP-DADGVSVTTDRG-TYRAGKVVLACGPY  207 (397)
T ss_dssp             TCEEEESCCEEEEEE-ETTEEEEEESSC-EEEEEEEEECCGGG
T ss_pred             CCEEECCCEEEEEEE-cCCeEEEEECCC-EEEcCEEEEcCCcC
Confidence            678999999999998 777899988776 89999999998643

>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}

Probab=89.24  E-value=0.44  Score=45.60  Aligned_cols=41  Identities=17%  Similarity=0.108  Sum_probs=36.1

Q ss_pred             CCcEEcCCeEEEEEecCCCcEE-EEeCCCcEEEeCEEEEeCChh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAA-VSCSDGSVYTAYKIIITVPLG  131 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~-V~~~~G~~~~ad~VIvTvP~~  131 (412)
                      +.+|+.+++|++|.. ++++|. |++.+| ++.||+||+|+-..
T Consensus       163 Gv~i~~~~~v~~i~~-~~~~v~gv~~~~g-~i~a~~VV~A~G~~  204 (382)
T 1y56_B          163 GAKLLEYTEVKGFLI-ENNEIKGVKTNKG-IIKTGIVVNATNAW  204 (382)
T ss_dssp             TCEEECSCCEEEEEE-SSSBEEEEEETTE-EEECSEEEECCGGG
T ss_pred             CCEEECCceEEEEEE-ECCEEEEEEECCc-EEECCEEEECcchh
Confidence            678999999999998 778887 888888 89999999998664

>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*

Probab=89.13  E-value=0.41  Score=40.55  Aligned_cols=39  Identities=13%  Similarity=0.096  Sum_probs=34.1

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCCh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPL  130 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~  130 (412)
                      +.+|+++ +|++|+. +++++.|++.+| ++.+|.||+|+-.
T Consensus        70 gv~v~~~-~v~~i~~-~~~~~~v~~~~g-~i~ad~vI~A~G~  108 (180)
T 2ywl_A           70 GAEVRPG-VVKGVRD-MGGVFEVETEEG-VEKAERLLLCTHK  108 (180)
T ss_dssp             TCEEEEC-CCCEEEE-CSSSEEEECSSC-EEEEEEEEECCTT
T ss_pred             CCEEEeC-EEEEEEE-cCCEEEEEECCC-EEEECEEEECCCC
Confidence            4579999 9999998 777899999888 8999999999764

>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}

Probab=89.02  E-value=0.12  Score=48.72  Aligned_cols=40  Identities=20%  Similarity=0.288  Sum_probs=30.6

Q ss_pred             CCCceEEEecccccCcC----cc-cchhhhhccHHHHHHHHHHHH
Q psy10795        339 EGRPVLLFAGEATSPHH----YG-TVNGAVESGARETANAIVYLR  378 (412)
Q Consensus       339 ~~~~~l~fAGe~t~~~~----~g-~~eGA~~SG~raA~~i~~~l~  378 (412)
                      ++.|+||.|||+....+    .| +.-|++.||++||+.|++.|.
T Consensus       281 t~vpGv~aaGDaa~~v~g~~rmGp~~g~mi~SG~~AAe~I~~~la  325 (326)
T 3fpz_A          281 AGVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFA  325 (326)
T ss_dssp             TTSBTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred             ECCCCEEEEchHhccccCCCcCchHHHHHHHHHHHHHHHHHHHhc
Confidence            44578999999875321    13 556678999999999999986

>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}

Probab=89.02  E-value=0.39  Score=46.42  Aligned_cols=43  Identities=14%  Similarity=0.262  Sum_probs=37.6

Q ss_pred             CCcEEcCCeEEEEEecCCCcE--EEEeCCCcEEEeCEEEEeCChhh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGA--AVSCSDGSVYTAYKIIITVPLGV  132 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V--~V~~~~G~~~~ad~VIvTvP~~~  132 (412)
                      +.+|+++++|++|.. ++++|  .|++.+|++++||.||.|.-...
T Consensus       122 gv~i~~~~~v~~i~~-~~~~v~g~v~~~~g~~~~ad~vV~AdG~~s  166 (399)
T 2x3n_A          122 TVEMLFETRIEAVQR-DERHAIDQVRLNDGRVLRPRVVVGADGIAS  166 (399)
T ss_dssp             TEEEECSCCEEEEEE-CTTSCEEEEEETTSCEEEEEEEEECCCTTC
T ss_pred             CcEEEcCCEEEEEEE-cCCceEEEEEECCCCEEECCEEEECCCCCh
Confidence            457999999999998 77888  89999998999999999987643

>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}

Probab=89.01  E-value=0.58  Score=46.72  Aligned_cols=41  Identities=17%  Similarity=0.297  Sum_probs=37.2

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCCh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPL  130 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~  130 (412)
                      +.+|+++++|++|+. +++++.|++.+|+++.||.||+|+..
T Consensus       246 Gv~i~~~~~V~~i~~-~~~~v~v~~~~g~~i~aD~Vi~A~G~  286 (484)
T 3o0h_A          246 GISIIYEATVSQVQS-TENCYNVVLTNGQTICADRVMLATGR  286 (484)
T ss_dssp             TCEEESSCCEEEEEE-CSSSEEEEETTSCEEEESEEEECCCE
T ss_pred             CCEEEeCCEEEEEEe-eCCEEEEEECCCcEEEcCEEEEeeCC
Confidence            568999999999998 77889999999999999999999875

>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1

Probab=88.75  E-value=0.62  Score=46.74  Aligned_cols=41  Identities=12%  Similarity=0.238  Sum_probs=36.5

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCCh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPL  130 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~  130 (412)
                      +.+|+++++|++|.. ++++|.|++.+|+++.+|.||+|+..
T Consensus       237 GV~i~~~~~V~~i~~-~~~~v~v~~~~g~~i~aD~Vv~a~G~  277 (499)
T 1xdi_A          237 GVRLFKNARAASVTR-TGAGVLVTMTDGRTVEGSHALMTIGS  277 (499)
T ss_dssp             TCEEETTCCEEEEEE-CSSSEEEEETTSCEEEESEEEECCCE
T ss_pred             CCEEEeCCEEEEEEE-eCCEEEEEECCCcEEEcCEEEECCCC
Confidence            668999999999998 67779898888989999999999865

>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*

Probab=88.71  E-value=0.47  Score=45.39  Aligned_cols=41  Identities=24%  Similarity=0.404  Sum_probs=36.1

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLG  131 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~  131 (412)
                      +.+|+++++|++|.. ++++|.|++.+| ++.||.||+|+-..
T Consensus       164 Gv~i~~~~~v~~i~~-~~~~~~v~~~~g-~~~a~~vV~A~G~~  204 (389)
T 2gf3_A          164 GAKVLTHTRVEDFDI-SPDSVKIETANG-SYTADKLIVSMGAW  204 (389)
T ss_dssp             TCEEECSCCEEEEEE-CSSCEEEEETTE-EEEEEEEEECCGGG
T ss_pred             CCEEEcCcEEEEEEe-cCCeEEEEeCCC-EEEeCEEEEecCcc
Confidence            668999999999998 777899988777 79999999998765

>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*

Probab=88.54  E-value=0.38  Score=45.95  Aligned_cols=41  Identities=10%  Similarity=0.112  Sum_probs=36.5

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLG  131 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~  131 (412)
                      +.+|+++++|++|.. .+++|.|++.+| ++.||+||+|+...
T Consensus       178 g~~i~~~~~v~~i~~-~~~~~~v~~~~g-~~~a~~vV~A~G~~  218 (382)
T 1ryi_A          178 GAEIFEHTPVLHVER-DGEALFIKTPSG-DVWANHVVVASGVW  218 (382)
T ss_dssp             TCEEETTCCCCEEEC-SSSSEEEEETTE-EEEEEEEEECCGGG
T ss_pred             CCEEEcCCcEEEEEE-ECCEEEEEcCCc-eEEcCEEEECCChh
Confidence            668999999999998 778898888888 89999999999874

>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*

Probab=88.52  E-value=0.6  Score=45.01  Aligned_cols=41  Identities=17%  Similarity=0.182  Sum_probs=36.4

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCCh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPL  130 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~  130 (412)
                      +.+|+++++|++|.. +++++.|++.+|+++.||.||+|+..
T Consensus       201 gv~i~~~~~v~~i~~-~~~~~~v~~~~g~~i~~d~vv~a~G~  241 (384)
T 2v3a_A          201 GVRFHLGPVLASLKK-AGEGLEAHLSDGEVIPCDLVVSAVGL  241 (384)
T ss_dssp             TCEEEESCCEEEEEE-ETTEEEEEETTSCEEEESEEEECSCE
T ss_pred             CCEEEeCCEEEEEEe-cCCEEEEEECCCCEEECCEEEECcCC
Confidence            568999999999998 67788899999999999999999764

>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}

Probab=87.72  E-value=0.71  Score=45.86  Aligned_cols=41  Identities=12%  Similarity=0.096  Sum_probs=36.7

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCCh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPL  130 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~  130 (412)
                      +.+|+++++|++|.. .++++.|++.+|+++.||.||+|+..
T Consensus       216 GV~i~~~~~v~~i~~-~~~~v~v~~~~g~~i~aD~Vv~a~G~  256 (472)
T 3iwa_A          216 DVVVHTGEKVVRLEG-ENGKVARVITDKRTLDADLVILAAGV  256 (472)
T ss_dssp             TCEEECSCCEEEEEE-SSSBEEEEEESSCEEECSEEEECSCE
T ss_pred             CCEEEeCCEEEEEEc-cCCeEEEEEeCCCEEEcCEEEECCCC
Confidence            568999999999998 77888888889999999999999875

>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}

Probab=87.37  E-value=0.85  Score=44.40  Aligned_cols=41  Identities=20%  Similarity=0.209  Sum_probs=35.8

Q ss_pred             CCcEEcCCeEEEEEecCCCcE-EEEeCCCcEEEeCEEEEeCCh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGA-AVSCSDGSVYTAYKIIITVPL  130 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V-~V~~~~G~~~~ad~VIvTvP~  130 (412)
                      +.+|++++.|++|.. +++++ .|++.+|+++.||.||+++..
T Consensus       208 GV~i~~~~~v~~i~~-~~~~v~~v~l~dG~~i~aD~Vv~a~G~  249 (415)
T 3lxd_A          208 GVDLRTGAAMDCIEG-DGTKVTGVRMQDGSVIPADIVIVGIGI  249 (415)
T ss_dssp             TCEEEETCCEEEEEE-SSSBEEEEEESSSCEEECSEEEECSCC
T ss_pred             CCEEEECCEEEEEEe-cCCcEEEEEeCCCCEEEcCEEEECCCC
Confidence            668999999999998 66676 688899999999999999864

>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1

Probab=87.25  E-value=0.6  Score=46.15  Aligned_cols=41  Identities=24%  Similarity=0.284  Sum_probs=35.2

Q ss_pred             CCcEEcCCeEEEEEecCCCc-EEEEeCCCcEEEeCEEEEeCCh
Q psy10795         89 SNKILYKKEVNKIDWEYQNG-AAVSCSDGSVYTAYKIIITVPL  130 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~-V~V~~~~G~~~~ad~VIvTvP~  130 (412)
                      +.+|+++++|++|.. ++++ +.|++.+|+++.||.||+|+-.
T Consensus       148 GV~i~~~~~V~~i~~-~~~~v~~V~~~~G~~i~Ad~VVlAtGg  189 (447)
T 2i0z_A          148 GVKIRTNTPVETIEY-ENGQTKAVILQTGEVLETNHVVIAVGG  189 (447)
T ss_dssp             TCEEECSCCEEEEEE-ETTEEEEEEETTCCEEECSCEEECCCC
T ss_pred             CCEEEeCcEEEEEEe-cCCcEEEEEECCCCEEECCEEEECCCC
Confidence            668999999999997 6666 6788888978999999999854

>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}

Probab=87.12  E-value=0.59  Score=43.78  Aligned_cols=41  Identities=12%  Similarity=0.122  Sum_probs=36.2

Q ss_pred             CCcEEcCCeEEEEEecCCCcEE-EEeCCCcEEEeCEEEEeCChh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAA-VSCSDGSVYTAYKIIITVPLG  131 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~-V~~~~G~~~~ad~VIvTvP~~  131 (412)
                      +.++++++.|++|.. .++.+. |++.+| ++.+|+||+|+-..
T Consensus        90 ~~~~~~~~~v~~i~~-~~~~~~~v~~~~g-~~~~d~vV~AtG~~  131 (357)
T 4a9w_A           90 ALPVLRPIRVQRVSH-FGERLRVVARDGR-QWLARAVISATGTW  131 (357)
T ss_dssp             TCCEECSCCEEEEEE-ETTEEEEEETTSC-EEEEEEEEECCCSG
T ss_pred             CCEEEcCCEEEEEEE-CCCcEEEEEeCCC-EEEeCEEEECCCCC
Confidence            456999999999998 788898 999888 89999999998763

>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1

Probab=87.00  E-value=0.79  Score=44.72  Aligned_cols=40  Identities=15%  Similarity=0.266  Sum_probs=34.4

Q ss_pred             CCcEEcCCeEEEEEecC----CCcEEEEeCCCcEEEeCEEEEeCCh
Q psy10795         89 SNKILYKKEVNKIDWEY----QNGAAVSCSDGSVYTAYKIIITVPL  130 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~----~~~V~V~~~~G~~~~ad~VIvTvP~  130 (412)
                      +.+|+++++|++|.. +    +++|.|++.+| +++||+||+|+-.
T Consensus       123 Gv~i~~~~~v~~i~~-~~~g~~~~~~v~~~~g-~i~ad~VVlAtG~  166 (401)
T 2gqf_A          123 GAKILLRSEVSQVER-IQNDEKVRFVLQVNST-QWQCKNLIVATGG  166 (401)
T ss_dssp             TCEEECSCCEEEEEE-CCSCSSCCEEEEETTE-EEEESEEEECCCC
T ss_pred             CCEEEeCCEEEEEEc-ccCcCCCeEEEEECCC-EEECCEEEECCCC
Confidence            568999999999997 5    56799988877 8999999999843

>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}

Probab=86.85  E-value=0.74  Score=47.01  Aligned_cols=43  Identities=14%  Similarity=0.290  Sum_probs=37.1

Q ss_pred             CCcEEcCCeEEEEEecCCCcEE-EEeCCCcEEEeCEEEEeCChhh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAA-VSCSDGSVYTAYKIIITVPLGV  132 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~-V~~~~G~~~~ad~VIvTvP~~~  132 (412)
                      +.+|+++++|++|.. +++++. |++.+|+++.||.||+|+-...
T Consensus       234 Gv~I~~~t~V~~I~~-~~~~v~gV~l~~G~~i~Ad~VVlA~G~~s  277 (549)
T 3nlc_A          234 GGEIRFSTRVDDLHM-EDGQITGVTLSNGEEIKSRHVVLAVGHSA  277 (549)
T ss_dssp             TCEEESSCCEEEEEE-SSSBEEEEEETTSCEEECSCEEECCCTTC
T ss_pred             CCEEEeCCEEEEEEE-eCCEEEEEEECCCCEEECCEEEECCCCCh
Confidence            678999999999998 666664 8889999999999999987654

>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*

Probab=86.39  E-value=0.86  Score=45.02  Aligned_cols=41  Identities=22%  Similarity=0.197  Sum_probs=36.2

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCCh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPL  130 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~  130 (412)
                      +.+|+++++|++|+. +++++.|++.+|+++.+|.||+|+..
T Consensus       222 Gv~i~~~~~V~~i~~-~~~~v~v~~~~g~~i~~D~vv~A~G~  262 (455)
T 2yqu_A          222 GLTIRTGVRVTAVVP-EAKGARVELEGGEVLEADRVLVAVGR  262 (455)
T ss_dssp             TCEEECSCCEEEEEE-ETTEEEEEETTSCEEEESEEEECSCE
T ss_pred             CCEEEECCEEEEEEE-eCCEEEEEECCCeEEEcCEEEECcCC
Confidence            568999999999998 67778888888889999999999865

>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*

Probab=86.17  E-value=0.56  Score=46.29  Aligned_cols=42  Identities=17%  Similarity=-0.028  Sum_probs=35.0

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCC---Cc---EEEeCEEEEeCChh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSD---GS---VYTAYKIIITVPLG  131 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~---G~---~~~ad~VIvTvP~~  131 (412)
                      +..|++++.|++|+. .+++|+|++.+   |+   ++.+|+||+|+-..
T Consensus       129 ~~~i~~~t~V~~v~~-~~~~~~V~~~~~~~G~~~~~~~~d~VVvAtG~~  176 (447)
T 2gv8_A          129 LPFIKLATDVLDIEK-KDGSWVVTYKGTKAGSPISKDIFDAVSICNGHY  176 (447)
T ss_dssp             GGGEECSEEEEEEEE-ETTEEEEEEEESSTTCCEEEEEESEEEECCCSS
T ss_pred             hCeEEeCCEEEEEEe-CCCeEEEEEeecCCCCeeEEEEeCEEEECCCCC
Confidence            346999999999998 77778888765   76   78999999998763

>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*

Probab=86.01  E-value=0.76  Score=46.89  Aligned_cols=40  Identities=13%  Similarity=0.133  Sum_probs=34.9

Q ss_pred             CcEEcCCeEEEEEecCCC--cEEEEeCCCcEEEeCEEEEeCCh
Q psy10795         90 NKILYKKEVNKIDWEYQN--GAAVSCSDGSVYTAYKIIITVPL  130 (412)
Q Consensus        90 ~~I~ln~~V~~I~~~~~~--~V~V~~~~G~~~~ad~VIvTvP~  130 (412)
                      ..|++++.|++|++ +++  .|+|++.+|+++.||+||+|+-.
T Consensus       116 ~~i~~~~~V~~i~~-~~~~~~w~V~~~~G~~i~ad~lV~AtG~  157 (549)
T 4ap3_A          116 RDIRFDTRVTSAVL-DEEGLRWTVRTDRGDEVSARFLVVAAGP  157 (549)
T ss_dssp             GGEECSCCEEEEEE-ETTTTEEEEEETTCCEEEEEEEEECCCS
T ss_pred             ccEEECCEEEEEEE-cCCCCEEEEEECCCCEEEeCEEEECcCC
Confidence            37999999999998 443  68999999999999999999874

>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}

Probab=85.83  E-value=0.88  Score=42.48  Aligned_cols=42  Identities=21%  Similarity=0.290  Sum_probs=36.1

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLG  131 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~  131 (412)
                      +.++++++.|++|+. .++.++|++.+|+++.+|+||+|+-..
T Consensus        79 ~~~~~~~~~v~~i~~-~~~~~~v~~~~g~~~~~~~lv~AtG~~  120 (335)
T 2zbw_A           79 NPVYSLGERAETLER-EGDLFKVTTSQGNAYTAKAVIIAAGVG  120 (335)
T ss_dssp             CCEEEESCCEEEEEE-ETTEEEEEETTSCEEEEEEEEECCTTS
T ss_pred             CCEEEeCCEEEEEEE-CCCEEEEEECCCCEEEeCEEEECCCCC
Confidence            447899999999998 666888999888899999999998763

>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*

Probab=85.78  E-value=1  Score=45.15  Aligned_cols=41  Identities=17%  Similarity=0.189  Sum_probs=36.1

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCCh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPL  130 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~  130 (412)
                      +-+|++++.|++|.. +++.+.|++.+|+++.||.||+++..
T Consensus       240 GV~v~~~~~V~~i~~-~~~~~~v~l~dG~~i~aD~Vv~a~G~  280 (493)
T 1m6i_A          240 GVKVMPNAIVQSVGV-SSGKLLIKLKDGRKVETDHIVAAVGL  280 (493)
T ss_dssp             TCEEECSCCEEEEEE-ETTEEEEEETTSCEEEESEEEECCCE
T ss_pred             CCEEEeCCEEEEEEe-cCCeEEEEECCCCEEECCEEEECCCC
Confidence            568999999999987 66678888999999999999999875

>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}

Probab=85.78  E-value=1  Score=43.77  Aligned_cols=41  Identities=17%  Similarity=0.238  Sum_probs=35.3

Q ss_pred             CCcEEcCCeEEEEEecCCCcE-EEEeCCCcEEEeCEEEEeCCh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGA-AVSCSDGSVYTAYKIIITVPL  130 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V-~V~~~~G~~~~ad~VIvTvP~  130 (412)
                      +.+|++++.|++|.. +++++ .|++.+|+++.||.||+++..
T Consensus       198 GV~i~~~~~v~~i~~-~~~~v~~V~~~dG~~i~aD~Vv~a~G~  239 (404)
T 3fg2_P          198 GIRMHYGVRATEIAA-EGDRVTGVVLSDGNTLPCDLVVVGVGV  239 (404)
T ss_dssp             TCEEECSCCEEEEEE-ETTEEEEEEETTSCEEECSEEEECCCE
T ss_pred             CcEEEECCEEEEEEe-cCCcEEEEEeCCCCEEEcCEEEECcCC
Confidence            568999999999997 66665 588899999999999999865

>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*

Probab=85.51  E-value=0.79  Score=46.63  Aligned_cols=39  Identities=23%  Similarity=0.315  Sum_probs=34.6

Q ss_pred             cEEcCCeEEEEEecCCC--cEEEEeCCCcEEEeCEEEEeCCh
Q psy10795         91 KILYKKEVNKIDWEYQN--GAAVSCSDGSVYTAYKIIITVPL  130 (412)
Q Consensus        91 ~I~ln~~V~~I~~~~~~--~V~V~~~~G~~~~ad~VIvTvP~  130 (412)
                      .|+++++|++|++ +++  .|+|++.+|+++.||+||+|+-.
T Consensus       105 ~i~~~~~V~~i~~-~~~~~~~~V~~~~G~~i~ad~lV~AtG~  145 (540)
T 3gwf_A          105 HFKFGTEVTSALY-LDDENLWEVTTDHGEVYRAKYVVNAVGL  145 (540)
T ss_dssp             GEEESCCEEEEEE-ETTTTEEEEEETTSCEEEEEEEEECCCS
T ss_pred             eeEeccEEEEEEE-eCCCCEEEEEEcCCCEEEeCEEEECCcc
Confidence            7999999999998 544  78999999999999999999875

>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*

Probab=85.01  E-value=0.43  Score=50.32  Aligned_cols=30  Identities=17%  Similarity=0.286  Sum_probs=27.7

Q ss_pred             hhHHHHhhcCCccccceEEEEc-----CCCCccCC
Q psy10795          4 IALGTLLQGLNFGTVDKIFIRF-----PAKWWKDG   33 (412)
Q Consensus         4 ~~~~~ai~~lgfgt~~Kifl~f-----~~~~w~~~   33 (412)
                      ..|.+||+++.++...|||++|     ++|||..+
T Consensus       462 ~~~~~Ai~~l~~~~s~Kv~l~~~~~~~~~~fW~~~  496 (721)
T 3ayj_A          462 ARIVTAIGQLHMARSSKVFATVKTAALDQPWVPQW  496 (721)
T ss_dssp             HHHHHHHHTCCEECEEEEEEEEEGGGGGSTTSCEE
T ss_pred             HHHHHHHHhcCcccceEEEEEEccccCCCCccccc
Confidence            4689999999999999999999     99999765

>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}

Probab=84.85  E-value=1.2  Score=43.94  Aligned_cols=40  Identities=18%  Similarity=0.175  Sum_probs=35.0

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCCh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPL  130 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~  130 (412)
                      +-+|+++++|++|.. .++++.|++.+| ++.||.||+|+..
T Consensus       203 GV~i~~~~~v~~i~~-~~~~v~v~~~~g-~i~aD~Vv~A~G~  242 (452)
T 3oc4_A          203 AVIFHFEETVLGIEE-TANGIVLETSEQ-EISCDSGIFALNL  242 (452)
T ss_dssp             TEEEEETCCEEEEEE-CSSCEEEEESSC-EEEESEEEECSCC
T ss_pred             CCEEEeCCEEEEEEc-cCCeEEEEECCC-EEEeCEEEECcCC
Confidence            557999999999997 777888888777 8999999999875

>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}

Probab=84.78  E-value=1  Score=42.59  Aligned_cols=41  Identities=15%  Similarity=0.056  Sum_probs=35.3

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLG  131 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~  131 (412)
                      +.+|+++++|++|.. .++++.|++.+| ++.+|+||+|+-..
T Consensus       102 gv~i~~~~~v~~i~~-~~~~~~v~~~~g-~~~~d~vVlAtG~~  142 (369)
T 3d1c_A          102 ELNIFENTVVTNISA-DDAYYTIATTTE-TYHADYIFVATGDY  142 (369)
T ss_dssp             TCEEECSCCEEEEEE-CSSSEEEEESSC-CEEEEEEEECCCST
T ss_pred             CCeEEeCCEEEEEEE-CCCeEEEEeCCC-EEEeCEEEECCCCC
Confidence            457999999999998 677899998887 68999999998764

>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*

Probab=84.60  E-value=1.2  Score=43.35  Aligned_cols=41  Identities=20%  Similarity=0.115  Sum_probs=35.3

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCCh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPL  130 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~  130 (412)
                      +-+|++++.|++|.. ++....|++.+|+++.||.||+++..
T Consensus       199 GV~i~~~~~v~~i~~-~~~~~~v~~~dg~~i~aD~Vv~a~G~  239 (410)
T 3ef6_A          199 GVQVELGTGVVGFSG-EGQLEQVMASDGRSFVADSALICVGA  239 (410)
T ss_dssp             TCEEECSCCEEEEEC-SSSCCEEEETTSCEEECSEEEECSCE
T ss_pred             CCEEEeCCEEEEEec-cCcEEEEEECCCCEEEcCEEEEeeCC
Confidence            568999999999987 55545788999999999999999875

>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}

Probab=84.55  E-value=1.1  Score=45.02  Aligned_cols=43  Identities=9%  Similarity=-0.034  Sum_probs=36.8

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCc---EEEeCEEEEeCChhh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGS---VYTAYKIIITVPLGV  132 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~---~~~ad~VIvTvP~~~  132 (412)
                      +.+|+++++|++|+. ++++|+|++.+|+   +++||+||.|-=...
T Consensus       121 gv~v~~~~~v~~i~~-~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S  166 (499)
T 2qa2_A          121 GAELLRGHTVRALTD-EGDHVVVEVEGPDGPRSLTTRYVVGCDGGRS  166 (499)
T ss_dssp             TCEEEESCEEEEEEE-CSSCEEEEEECSSCEEEEEEEEEEECCCTTC
T ss_pred             CCEEEcCCEEEEEEE-eCCEEEEEEEcCCCcEEEEeCEEEEccCccc
Confidence            568999999999998 8889999988775   789999999876643

>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*

Probab=84.26  E-value=1.4  Score=43.75  Aligned_cols=41  Identities=15%  Similarity=0.157  Sum_probs=35.9

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCc-EEEeCEEEEeCCh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGS-VYTAYKIIITVPL  130 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~-~~~ad~VIvTvP~  130 (412)
                      +-+|+++++|++|.. +++++.|++.+|+ ++.+|.||+|+..
T Consensus       221 gv~i~~~~~v~~i~~-~~~~~~v~~~~G~~~i~~D~vv~a~G~  262 (463)
T 2r9z_A          221 GIETHLEFAVAALER-DAQGTTLVAQDGTRLEGFDSVIWAVGR  262 (463)
T ss_dssp             TCEEESSCCEEEEEE-ETTEEEEEETTCCEEEEESEEEECSCE
T ss_pred             CCEEEeCCEEEEEEE-eCCeEEEEEeCCcEEEEcCEEEECCCC
Confidence            568999999999997 6666889999998 8999999999865

>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*

Probab=84.09  E-value=1  Score=45.63  Aligned_cols=41  Identities=17%  Similarity=0.220  Sum_probs=34.7

Q ss_pred             CcEEcCCeEEEEEecCC-CcEEEEeCCCcEEEeCEEEEeCCh
Q psy10795         90 NKILYKKEVNKIDWEYQ-NGAAVSCSDGSVYTAYKIIITVPL  130 (412)
Q Consensus        90 ~~I~ln~~V~~I~~~~~-~~V~V~~~~G~~~~ad~VIvTvP~  130 (412)
                      ..|+++++|+++++.++ +.|+|++.+|++++||+||+|+-.
T Consensus       111 ~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~  152 (542)
T 1w4x_A          111 SGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQ  152 (542)
T ss_dssp             GGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCS
T ss_pred             ceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCC
Confidence            46999999999998322 468999999989999999999864

>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*

Probab=84.00  E-value=0.28  Score=52.35  Aligned_cols=30  Identities=23%  Similarity=0.556  Sum_probs=27.0

Q ss_pred             hhHHHHhhcCCccccceEEEEcCCCCccCC
Q psy10795          4 IALGTLLQGLNFGTVDKIFIRFPAKWWKDG   33 (412)
Q Consensus         4 ~~~~~ai~~lgfgt~~Kifl~f~~~~w~~~   33 (412)
                      ..|..+|+++++|+++|++|.|+++||..+
T Consensus       599 ~~~~~ai~~l~~g~~~KV~l~f~~~FW~~~  628 (776)
T 4gut_A          599 EKKMKAINSLGAGIIEKIALQFPYRFWDSK  628 (776)
T ss_dssp             HHHHHHHHHEEEECCEEEEEECSSCTTHHH
T ss_pred             HHHHHHHHhCCCeeEEEEEEecCccccccc
Confidence            357899999999999999999999999653

>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*

Probab=83.87  E-value=1.1  Score=45.23  Aligned_cols=41  Identities=15%  Similarity=0.191  Sum_probs=35.0

Q ss_pred             CCcEEcCCeEEEEEecCCCc----EEEEeCCCc-EEEeCEEEEeCCh
Q psy10795         89 SNKILYKKEVNKIDWEYQNG----AAVSCSDGS-VYTAYKIIITVPL  130 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~----V~V~~~~G~-~~~ad~VIvTvP~  130 (412)
                      +.+|+++++|++|.. .+++    +.|++.+|+ ++.||.||+|+..
T Consensus       269 GV~i~~~~~V~~i~~-~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~  314 (523)
T 1mo9_A          269 GMEIISGSNVTRIEE-DANGRVQAVVAMTPNGEMRIETDFVFLGLGE  314 (523)
T ss_dssp             TCEEESSCEEEEEEE-CTTSBEEEEEEEETTEEEEEECSCEEECCCC
T ss_pred             CcEEEECCEEEEEEE-cCCCceEEEEEEECCCcEEEEcCEEEECcCC
Confidence            668999999999997 5555    788888887 8999999999754

>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*

Probab=83.71  E-value=1.6  Score=43.00  Aligned_cols=41  Identities=12%  Similarity=0.082  Sum_probs=35.1

Q ss_pred             CCcEEcCCeEEEEEecCCCc-EEEEeCCCcEEEeCEEEEeCCh
Q psy10795         89 SNKILYKKEVNKIDWEYQNG-AAVSCSDGSVYTAYKIIITVPL  130 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~-V~V~~~~G~~~~ad~VIvTvP~  130 (412)
                      +-+|+++++|++|.. ++++ +.|++.+|+++.+|.||+|+..
T Consensus       222 Gv~i~~~~~v~~i~~-~~~~~~~v~~~~g~~i~~D~vv~a~G~  263 (450)
T 1ges_A          222 GPQLHTNAIPKAVVK-NTDGSLTLELEDGRSETVDCLIWAIGR  263 (450)
T ss_dssp             SCEEECSCCEEEEEE-CTTSCEEEEETTSCEEEESEEEECSCE
T ss_pred             CCEEEeCCEEEEEEE-eCCcEEEEEECCCcEEEcCEEEECCCC
Confidence            568999999999997 5544 8888999989999999999865

>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}

Probab=83.44  E-value=1.1  Score=42.47  Aligned_cols=43  Identities=16%  Similarity=0.188  Sum_probs=33.7

Q ss_pred             ceEEEecccccCcCcc---cchhhhhccHHHHHHHHHHHHhcchhh
Q psy10795        342 PVLLFAGEATSPHHYG---TVNGAVESGARETANAIVYLRREGFFE  384 (412)
Q Consensus       342 ~~l~fAGe~t~~~~~g---~~eGA~~SG~raA~~i~~~l~~~~~~~  384 (412)
                      ++++++||+.+...+-   -|.-|+++|..+|+.|.+.+....+.+
T Consensus       277 ~~v~lvGDAA~~~~P~~G~Gi~~A~~~g~~~A~~i~~~l~~~~~~~  322 (397)
T 3oz2_A          277 PGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVTKEAIESNDYSP  322 (397)
T ss_dssp             TTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTCCSH
T ss_pred             eeEEEcccccccCCCCcchhHHHHHHHHHHHHHHHHHHHHcCCccH
Confidence            3899999998765443   356699999999999999888765543

>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}

Probab=83.43  E-value=1.6  Score=41.26  Aligned_cols=42  Identities=19%  Similarity=0.375  Sum_probs=35.9

Q ss_pred             CCcEEcCCeEEEEEecCCC-cEEEEeCCCcEEEeCEEEEeCChh
Q psy10795         89 SNKILYKKEVNKIDWEYQN-GAAVSCSDGSVYTAYKIIITVPLG  131 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~-~V~V~~~~G~~~~ad~VIvTvP~~  131 (412)
                      +.++++++.|++|.. .++ .+.|++.+|+++.+|+||+|+-..
T Consensus        88 ~~~~~~~~~v~~i~~-~~~~~~~v~~~~g~~~~~~~li~AtG~~  130 (360)
T 3ab1_A           88 NPDVVLNETVTKYTK-LDDGTFETRTNTGNVYRSRAVLIAAGLG  130 (360)
T ss_dssp             CCEEECSCCEEEEEE-CTTSCEEEEETTSCEEEEEEEEECCTTC
T ss_pred             CCEEEcCCEEEEEEE-CCCceEEEEECCCcEEEeeEEEEccCCC
Confidence            457899999999998 544 789999999899999999998764

>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}

Probab=83.13  E-value=1.1  Score=44.96  Aligned_cols=42  Identities=14%  Similarity=-0.029  Sum_probs=36.2

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCc---EEEeCEEEEeCChh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGS---VYTAYKIIITVPLG  131 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~---~~~ad~VIvTvP~~  131 (412)
                      +.+|+++++|++|+. ++++|+|++.+|+   +++||+||.|-=..
T Consensus       120 gv~v~~~~~v~~i~~-~~~~v~v~~~~~~g~~~~~a~~vVgADG~~  164 (500)
T 2qa1_A          120 GADIRRGHEVLSLTD-DGAGVTVEVRGPEGKHTLRAAYLVGCDGGR  164 (500)
T ss_dssp             TCEEEETCEEEEEEE-ETTEEEEEEEETTEEEEEEESEEEECCCTT
T ss_pred             CCEEECCcEEEEEEE-cCCeEEEEEEcCCCCEEEEeCEEEECCCcc
Confidence            568999999999998 7888999887775   78999999987664

>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*

Probab=82.71  E-value=2  Score=43.06  Aligned_cols=41  Identities=10%  Similarity=0.211  Sum_probs=35.1

Q ss_pred             CCcEEcCCeEEEEEecCCC-cEEEEeCCCcEEEeCEEEEeCCh
Q psy10795         89 SNKILYKKEVNKIDWEYQN-GAAVSCSDGSVYTAYKIIITVPL  130 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~-~V~V~~~~G~~~~ad~VIvTvP~  130 (412)
                      +-+|++++.|++|.. +++ .+.|++.+|+++.+|.||+++..
T Consensus       249 GV~i~~~~~v~~i~~-~~~~~~~v~~~~G~~i~~D~vv~a~G~  290 (495)
T 2wpf_A          249 GIEIMTNENPAKVSL-NTDGSKHVTFESGKTLDVDVVMMAIGR  290 (495)
T ss_dssp             TCEEEESCCEEEEEE-CTTSCEEEEETTSCEEEESEEEECSCE
T ss_pred             CCEEEeCCEEEEEEE-cCCceEEEEECCCcEEEcCEEEECCCC
Confidence            568999999999997 543 47888889989999999999864

>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*

Probab=82.58  E-value=1.7  Score=43.39  Aligned_cols=41  Identities=7%  Similarity=0.054  Sum_probs=35.1

Q ss_pred             CCcEEcCCeEEEEEecCCC-cEEEEeCCCcEEEeCEEEEeCCh
Q psy10795         89 SNKILYKKEVNKIDWEYQN-GAAVSCSDGSVYTAYKIIITVPL  130 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~-~V~V~~~~G~~~~ad~VIvTvP~  130 (412)
                      +-+|+++++|++|.. +++ .+.|++.+|+++.+|.||+|+..
T Consensus       245 GV~i~~~~~v~~i~~-~~~~~~~v~~~~G~~i~~D~vv~a~G~  286 (490)
T 1fec_A          245 GINVRTHENPAKVTK-NADGTRHVVFESGAEADYDVVMLAIGR  286 (490)
T ss_dssp             TEEEEETCCEEEEEE-CTTSCEEEEETTSCEEEESEEEECSCE
T ss_pred             CCEEEeCCEEEEEEE-cCCCEEEEEECCCcEEEcCEEEEccCC
Confidence            557999999999997 554 48888889989999999999865

>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}

Probab=82.10  E-value=1.8  Score=43.00  Aligned_cols=41  Identities=12%  Similarity=0.118  Sum_probs=34.4

Q ss_pred             CCcEEcCCeEEEEEecCCCc--EEEEeCCC-cEEEeCEEEEeCCh
Q psy10795         89 SNKILYKKEVNKIDWEYQNG--AAVSCSDG-SVYTAYKIIITVPL  130 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~--V~V~~~~G-~~~~ad~VIvTvP~  130 (412)
                      +-+|+++++|++|.. ++++  +.|++.+| +++.+|.||+|+..
T Consensus       240 Gv~i~~~~~v~~i~~-~~~~~~~~v~~~~G~~~i~~D~vv~a~G~  283 (479)
T 2hqm_A          240 GINVHKLSKIVKVEK-NVETDKLKIHMNDSKSIDDVDELIWTIGR  283 (479)
T ss_dssp             TCEEECSCCEEEEEE-CC-CCCEEEEETTSCEEEEESEEEECSCE
T ss_pred             CeEEEeCCEEEEEEE-cCCCcEEEEEECCCcEEEEcCEEEECCCC
Confidence            568999999999987 5554  78888899 78999999999864

>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*

Probab=82.09  E-value=1.1  Score=45.71  Aligned_cols=41  Identities=12%  Similarity=0.062  Sum_probs=34.8

Q ss_pred             CcEEcCCeEEEEEecC-CCcEEEEeCCCcEEEeCEEEEeCCh
Q psy10795         90 NKILYKKEVNKIDWEY-QNGAAVSCSDGSVYTAYKIIITVPL  130 (412)
Q Consensus        90 ~~I~ln~~V~~I~~~~-~~~V~V~~~~G~~~~ad~VIvTvP~  130 (412)
                      ..|++++.|+++++.+ .+.|+|++.+|++++||+||+|+-.
T Consensus       104 ~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~  145 (545)
T 3uox_A          104 KHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGP  145 (545)
T ss_dssp             GGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCS
T ss_pred             CcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCC
Confidence            3699999999999832 2468999999999999999999874

>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*

Probab=81.87  E-value=1.6  Score=41.91  Aligned_cols=41  Identities=17%  Similarity=0.062  Sum_probs=34.6

Q ss_pred             CCcEEcCCeEEEEEecCCCc-EEEEeCCCcEEEeCEEEEeCChh
Q psy10795         89 SNKILYKKEVNKIDWEYQNG-AAVSCSDGSVYTAYKIIITVPLG  131 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~-V~V~~~~G~~~~ad~VIvTvP~~  131 (412)
                      +.+|+++++|++|.. ++++ +.|++.+| ++.||+||+|+-..
T Consensus       188 g~~i~~~~~v~~i~~-~~~~~~~v~~~~g-~~~a~~vV~a~G~~  229 (405)
T 2gag_B          188 GVDIIQNCEVTGFIK-DGEKVTGVKTTRG-TIHAGKVALAGAGH  229 (405)
T ss_dssp             TCEEECSCCEEEEEE-SSSBEEEEEETTC-CEEEEEEEECCGGG
T ss_pred             CCEEEcCCeEEEEEE-eCCEEEEEEeCCc-eEECCEEEECCchh
Confidence            678999999999998 6665 46888888 79999999998764

>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*

Probab=81.25  E-value=1.6  Score=40.28  Aligned_cols=41  Identities=15%  Similarity=0.187  Sum_probs=35.0

Q ss_pred             CCcEEcCCeEEEEEecCCC-cEEEEeCCCcEEEeCEEEEeCChh
Q psy10795         89 SNKILYKKEVNKIDWEYQN-GAAVSCSDGSVYTAYKIIITVPLG  131 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~-~V~V~~~~G~~~~ad~VIvTvP~~  131 (412)
                      +.++++++.|++|.. .++ .+.|++.+|+ +.+|+||+|+-..
T Consensus        81 ~~~~~~~~~v~~i~~-~~~~~~~v~~~~g~-~~~d~vVlAtG~~  122 (332)
T 3lzw_A           81 DQTICLEQAVESVEK-QADGVFKLVTNEET-HYSKTVIITAGNG  122 (332)
T ss_dssp             CCEEECSCCEEEEEE-CTTSCEEEEESSEE-EEEEEEEECCTTS
T ss_pred             CCcEEccCEEEEEEE-CCCCcEEEEECCCE-EEeCEEEECCCCC
Confidence            557999999999998 554 7899999885 9999999998763

>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*

Probab=81.13  E-value=0.76  Score=44.48  Aligned_cols=39  Identities=8%  Similarity=0.078  Sum_probs=33.0

Q ss_pred             ceEEEecccccCcCcccchhhhhccHHHHHHHHHHHHhcc
Q psy10795        342 PVLLFAGEATSPHHYGTVNGAVESGARETANAIVYLRREG  381 (412)
Q Consensus       342 ~~l~fAGe~t~~~~~g~~eGA~~SG~raA~~i~~~l~~~~  381 (412)
                      ++|+|||.+....+ +.|+.++.||+++|++|+..+...+
T Consensus       336 ~~~~~~Gr~~~~~~-~~~~d~i~sa~~~a~~~~~~~~~~~  374 (384)
T 2bi7_A          336 TNITFVGRLGTYRY-LDMDVTIAEALKTAEVYLNSLTENQ  374 (384)
T ss_dssp             SSEEECHHHHTTCC-CCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CCEEEccccEEEEe-CCHHHHHHHHHHHHHHHhhhhhccC
Confidence            48999999877644 6799999999999999998776554

>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...

Probab=81.13  E-value=1.7  Score=41.71  Aligned_cols=44  Identities=11%  Similarity=-0.002  Sum_probs=35.4

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEe-CCCc--EEEeCEEEEeCChhh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSC-SDGS--VYTAYKIIITVPLGV  132 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~-~~G~--~~~ad~VIvTvP~~~  132 (412)
                      +.+|+++++|++|...++++|.|++ .+|+  +++||.||.|.-...
T Consensus       117 g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~AdG~~S  163 (394)
T 1k0i_A          117 GATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGCDGFHG  163 (394)
T ss_dssp             TCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEECCCTTC
T ss_pred             CCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEECCCCCc
Confidence            5689999999999972245688887 7886  689999999987643

>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*

Probab=80.81  E-value=0.25  Score=48.00  Aligned_cols=61  Identities=13%  Similarity=0.085  Sum_probs=45.9

Q ss_pred             ceeeecCCcCCCCCCcEEcCCeEE-EEEecCCCcEEEEeCCCcEEEeCEEEEeCChhhhhcCcccccCCCcHHHHHHHhc
Q psy10795         76 LTLLVSGQTPVDLSNKILYKKEVN-KIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNAIEG  154 (412)
Q Consensus        76 ~vl~~~~~~~~~~~~~I~ln~~V~-~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~~L~~~~i~f~P~Lp~~k~~ai~~  154 (412)
                      ..++.++++..  +.+|++|++|+ +|..                .||+||+|+|+..+.+.              .+.+
T Consensus       199 ~~l~~~l~~~~--g~~I~l~~~V~~~i~~----------------~~d~VI~a~p~~~~~~~--------------~lg~  246 (384)
T 2bi7_A          199 TQMIKSILNHE--NIKVDLQREFIVEERT----------------HYDHVFYSGPLDAFYGY--------------QYGR  246 (384)
T ss_dssp             HHHHHHHHCST--TEEEEESCCCCGGGGG----------------GSSEEEECSCHHHHTTT--------------TTCC
T ss_pred             HHHHHHHHhcC--CCEEEECCeeehhhhc----------------cCCEEEEcCCHHHHHHh--------------hcCC
Confidence            34555555432  56899999999 8864                18999999999998872              1346


Q ss_pred             CCCcceeEEEEEcC
Q psy10795        155 LNFGTVDKIFIRFP  168 (412)
Q Consensus       155 l~~g~~~KV~l~f~  168 (412)
                      +.|.+..-+.+.++
T Consensus       247 l~y~s~~~v~~~~d  260 (384)
T 2bi7_A          247 LGYRTLDFKKFTYQ  260 (384)
T ss_dssp             CCEEEEEEEEEEEE
T ss_pred             CCcceEEEEEEEeC
Confidence            88999888888887

>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}

Probab=80.79  E-value=2.1  Score=42.25  Aligned_cols=40  Identities=13%  Similarity=0.263  Sum_probs=34.4

Q ss_pred             CCcEEcCCeEEEEEecCCCc-EEEE-eCCCcEEEeCEEEEeCCh
Q psy10795         89 SNKILYKKEVNKIDWEYQNG-AAVS-CSDGSVYTAYKIIITVPL  130 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~-V~V~-~~~G~~~~ad~VIvTvP~  130 (412)
                      +.+|+++++|++|.. ++++ +.|+ +.+|+ +.+|.||+|+..
T Consensus       225 Gv~i~~~~~v~~i~~-~~~~~~~v~~~~~g~-i~aD~Vv~a~G~  266 (463)
T 4dna_A          225 GIRILCEDIIQSVSA-DADGRRVATTMKHGE-IVADQVMLALGR  266 (463)
T ss_dssp             TCEEECSCCEEEEEE-CTTSCEEEEESSSCE-EEESEEEECSCE
T ss_pred             CCEEECCCEEEEEEE-cCCCEEEEEEcCCCe-EEeCEEEEeeCc
Confidence            668999999999998 6555 7888 88997 999999999875

>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7

Probab=80.66  E-value=0.16  Score=48.98  Aligned_cols=67  Identities=13%  Similarity=0.010  Sum_probs=49.4

Q ss_pred             ceeeecCCcCCCCCCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChhhhhcCcccccCCCcHHHHHHHhcC
Q psy10795         76 LTLLVSGQTPVDLSNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNAIEGL  155 (412)
Q Consensus        76 ~vl~~~~~~~~~~~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~~L~~~~i~f~P~Lp~~k~~ai~~l  155 (412)
                      ..++.++++    +.+|++|++|++|.. .   |        ...||+||+|+|+..+.+.              .+.++
T Consensus       195 ~~l~~~l~~----g~~i~l~~~V~~i~~-~---v--------~~~~D~VV~a~p~~~~~~~--------------~l~~l  244 (367)
T 1i8t_A          195 TKLIEKMLE----GVDVKLGIDFLKDKD-S---L--------ASKAHRIIYTGPIDQYFDY--------------RFGAL  244 (367)
T ss_dssp             HHHHHHHHT----TSEEECSCCGGGSHH-H---H--------HTTEEEEEECSCHHHHTTT--------------TTCCC
T ss_pred             HHHHHHHhc----CCEEEeCCceeeech-h---h--------hccCCEEEEeccHHHHHHH--------------hhCCC
Confidence            345555555    357999999998864 2   2        1359999999999987751              24568


Q ss_pred             CCcceeEEEEEcCCCcc
Q psy10795        156 NFGTVDKIFIRFPAKWW  172 (412)
Q Consensus       156 ~~g~~~KV~l~f~~~fW  172 (412)
                      .|.+..-|.+.++++..
T Consensus       245 ~y~s~~~v~~~~d~~~~  261 (367)
T 1i8t_A          245 EYRSLKFETERHEFPNF  261 (367)
T ss_dssp             CEEEEEEEEEEESSSCS
T ss_pred             CCceEEEEEEEeccccC
Confidence            89999999999987643

>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*

Probab=80.61  E-value=1.1  Score=41.53  Aligned_cols=40  Identities=23%  Similarity=0.309  Sum_probs=33.7

Q ss_pred             CCceEEEecccccCcCcccchhhhhccHHHHHHHHHHHHhc
Q psy10795        340 GRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVYLRRE  380 (412)
Q Consensus       340 ~~~~l~fAGe~t~~~~~g~~eGA~~SG~raA~~i~~~l~~~  380 (412)
                      ..++||.|||.+.. .+..+..|+.+|..||..|.+.|.++
T Consensus       298 ~~~~vya~GD~~~~-~~~~~~~A~~~g~~aa~~i~~~l~~~  337 (338)
T 3itj_A          298 SVPGFFAAGDVQDS-KYRQAITSAGSGCMAALDAEKYLTSL  337 (338)
T ss_dssp             SSTTEEECGGGGCS-SCCCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CCCCEEEeeccCCC-CccceeeehhhhHHHHHHHHHHHhcC
Confidence            34689999999975 34678999999999999999998754

>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*

Probab=80.38  E-value=1.2  Score=44.13  Aligned_cols=28  Identities=25%  Similarity=0.616  Sum_probs=26.0

Q ss_pred             hHHHHhhcCCccccceEEEEcCCCCccC
Q psy10795          5 ALGTLLQGLNFGTVDKIFIRFPAKWWKD   32 (412)
Q Consensus         5 ~~~~ai~~lgfgt~~Kifl~f~~~~w~~   32 (412)
                      .|.++|+++.+|++.||+|.|++|||..
T Consensus       285 ~~~~ai~~~~~~~~~kv~l~~~~~~w~~  312 (472)
T 1b37_A          285 WKVRAIYQFDMAVYTKIFLKFPRKFWPE  312 (472)
T ss_dssp             HHHHHHHHSEEECEEEEEEECSSCCSCC
T ss_pred             HHHHHHHhcCCcceeEEEEECCCcCCCC
Confidence            5789999999999999999999999965

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	412
d1b5qa2	112	d.16.1.5 (A:294-405) Polyamine oxidase {Maize (Zea	3e-21
d1b5qa2	112	d.16.1.5 (A:294-405) Polyamine oxidase {Maize (Zea	8e-05
d2dw4a3	109	d.16.1.5 (A:655-763) Lysine-specific histone demet	3e-18
d2dw4a3	109	d.16.1.5 (A:655-763) Lysine-specific histone demet	1e-04
d2v5za2	112	d.16.1.5 (A:290-401) Monoamine oxidase B {Human (H	2e-17
d2iida2	113	d.16.1.5 (A:320-432) L-aminoacid oxidase {Malayan	3e-13
d2dw4a2	449	c.3.1.2 (A:274-654,A:764-831) Lysine-specific hist	4e-11
d1b5qa1	347	c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Mai	4e-07
d2v5za1	383	c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {H	3e-06
d2iida1	370	c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {M	5e-04

>d1b5qa2 d.16.1.5 (A:294-405) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} Length = 112

class: Alpha and beta proteins (a+b)
fold: FAD-linked reductases, C-terminal domain
superfamily: FAD-linked reductases, C-terminal domain
family: L-aminoacid/polyamine oxidase
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

 Score = 86.0 bits (212), Expect = 3e-21
 Identities = 25/126 (19%), Positives = 49/126 (38%), Gaps = 14/126 (11%)

Query: 156 NFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAE 215
           +     KIF++FP K+W +G     F +    +              +      F     
Sbjct: 1   DMAVYTKIFLKFPRKFWPEGKGREFFLYASSRR-------------GYYGVWQEFEKQYP 47

Query: 216 DPLTLLGWIAGPTARYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVRSAWSINPHF 275
           D   LL  +    +R +E       +A+IM++ R    G   +P+   I+   W  +  +
Sbjct: 48  DANVLLVTVTDEESRRIEQQSDEQTKAEIMQVLRKMFPG-KDVPDATDILVPRWWSDRFY 106

Query: 276 RGSYSH 281
           +G++S+
Sbjct: 107 KGTFSN 112

>d1b5qa2 d.16.1.5 (A:294-405) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} Length = 112

class: Alpha and beta proteins (a+b)
fold: FAD-linked reductases, C-terminal domain
superfamily: FAD-linked reductases, C-terminal domain
family: L-aminoacid/polyamine oxidase
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

 Score = 39.4 bits (91), Expect = 8e-05
 Identities = 10/61 (16%), Positives = 23/61 (37%), Gaps = 1/61 (1%)

Query: 14 NFGTVDKIFIRFPAKWWKDGCQGFNLYWTQQDKTDLFKDMVHVDGKPWVWGILGFYMDAE 73
          +     KIF++FP K+W +G       +    +   +      + +     +L   +  E
Sbjct: 1  DMAVYTKIFLKFPRKFWPEGKGREFFLYASSRR-GYYGVWQEFEKQYPDANVLLVTVTDE 59

Query: 74 D 74
          +
Sbjct: 60 E 60

>d2dw4a3 d.16.1.5 (A:655-763) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} Length = 109

class: Alpha and beta proteins (a+b)
fold: FAD-linked reductases, C-terminal domain
superfamily: FAD-linked reductases, C-terminal domain
family: L-aminoacid/polyamine oxidase
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.5 bits (190), Expect = 3e-18
 Identities = 28/125 (22%), Positives = 49/125 (39%), Gaps = 17/125 (13%)

Query: 157 FGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAED 216
           FG ++K+ + F   +W      F    +                      +  F+   + 
Sbjct: 2   FGNLNKVVLCFDRVFWDPSVNLFGHVGSTT---------------ASRGELFLFWNLYKA 46

Query: 217 PLTLLGWIAGPTARYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVRSAWSINPHFR 276
           P+ LL  +AG  A  ME +   V+    + + +   G + + P+P   V S W  +P  R
Sbjct: 47  PI-LLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAV-PQPKETVVSRWRADPWAR 104

Query: 277 GSYSH 281
           GSYS+
Sbjct: 105 GSYSY 109

>d2dw4a3 d.16.1.5 (A:655-763) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} Length = 109

class: Alpha and beta proteins (a+b)
fold: FAD-linked reductases, C-terminal domain
superfamily: FAD-linked reductases, C-terminal domain
family: L-aminoacid/polyamine oxidase
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.0 bits (90), Expect = 1e-04
 Identities = 9/64 (14%), Positives = 18/64 (28%), Gaps = 1/64 (1%)

Query: 15 FGTVDKIFIRFPAKWWKDGCQGFNLYWTQQDKTDLFKDMVHVDGKPWVWGILGFYMDAED 74
          FG ++K+ + F   +W      F    +          +     K  +   L     A  
Sbjct: 2  FGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGEL-FLFWNLYKAPILLALVAGEAAGI 60

Query: 75 PLTL 78
             +
Sbjct: 61 MENI 64

>d2v5za2 d.16.1.5 (A:290-401) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]} Length = 112

class: Alpha and beta proteins (a+b)
fold: FAD-linked reductases, C-terminal domain
superfamily: FAD-linked reductases, C-terminal domain
family: L-aminoacid/polyamine oxidase
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.6 bits (185), Expect = 2e-17
 Identities = 22/123 (17%), Positives = 38/123 (30%), Gaps = 15/123 (12%)

Query: 158 GTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDP 217
           G+V K  + +   +W               K D    M+    +  V   L       + 
Sbjct: 3   GSVIKCIVYYKEPFW--------------RKKDYCGTMIIDGEEAPVAYTLDDTKPEGNY 48

Query: 218 LTLLGWIAGPTARYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVRSAWSINPHFRG 277
             ++G+I    AR +  L        +  L+   LG      EP+      W    +  G
Sbjct: 49  AAIMGFILAHKARKLARLTKEERLKKLCELYAKVLGSLEA-LEPVHYEEKNWCEEQYSGG 107

Query: 278 SYS 280
            Y+
Sbjct: 108 CYT 110

>d2iida2 d.16.1.5 (A:320-432) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} Length = 113

class: Alpha and beta proteins (a+b)
fold: FAD-linked reductases, C-terminal domain
superfamily: FAD-linked reductases, C-terminal domain
family: L-aminoacid/polyamine oxidase
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

 Score = 63.7 bits (154), Expect = 3e-13
 Identities = 16/126 (12%), Positives = 34/126 (26%), Gaps = 17/126 (13%)

Query: 157 FGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAED 216
           + +  KIF+    K+W+D         T      ++    +      V            
Sbjct: 2   YRSGTKIFLTCTTKFWEDDGIHGGKSTTDLPSRFIYYPNHNFTNGVGV------------ 49

Query: 217 PLTLLGWIAGPTARYMETLPMAVLQADIMRLFRHFLG--GAYIIPEPIRIVRSAWSINPH 274
              ++ +  G  A + + L        +              I       V   WS++ +
Sbjct: 50  ---IIAYGIGDDANFFQALDFKDCADIVFNDLSLIHQLPKKDIQSFCYPSVIQKWSLDKY 106

Query: 275 FRGSYS 280
             G  +
Sbjct: 107 AMGGIT 112

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} Length = 449

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.3 bits (149), Expect = 4e-11
 Identities = 32/273 (11%), Positives = 64/273 (23%), Gaps = 51/273 (18%)

Query: 114 SDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNAIEGLNFGTVDKIFIRFPAKWWK 173
            D +        +    G L+ KL     + P+    +             + F      
Sbjct: 212 RDLTALCKEYDELAETQGKLEEKLQELEANPPSDVYLSSRDRQILDWHFANLEFANATPL 271

Query: 174 DGCQGFNF-----------YWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLG 222
                 ++           + T ++        +       +   +           ++ 
Sbjct: 272 STLSLKHWDQDDDFEFTGSHLTVRNGYSCVPVALAEGLDIKLNTAVRQVRYTASGCEVIA 331

Query: 223 WIAGPTARYMETLPMAVLQADIMRLFRHFLGGAYIIPEPIRIVRSAWSINPHFRGSYSHH 282
                T++       AVL    + + +                   W  +   R   +  
Sbjct: 332 VNTRSTSQTFIYKCDAVLCTLPLGVLKQQPP-----AVQFVPPLPEWKTSAVQRMVAAGS 386

Query: 283 GPTQHQCRRLGRSSYQQRRPPRAPLCRRSYQPTSLRNGSDRLNTSAADLAAPVINREGRP 342
               +                                  D +        +     +  P
Sbjct: 387 SGNDY----------------------------------DLMAQPITPGPSIPGAPQPIP 412

Query: 343 VLLFAGEATSPHHYGTVNGAVESGARETANAIV 375
            L FAGE T  ++  TV+GA+ SG RE A  I 
Sbjct: 413 RLFFAGEHTIRNYPATVHGALLSGLRE-AGRIA 444

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} Length = 347

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

 Score = 49.2 bits (115), Expect = 4e-07
 Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 2/77 (2%)

Query: 99  NKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNAIEGLNFG 158
            +       G  V   D SVY+A  ++++  LGVL+S LI F P LP  K+ AI      
Sbjct: 233 VREIKYSPGGVTVKTEDNSVYSADYVMVSASLGVLQSDLIQFKPKLPTWKVRAIYQFWPV 292

Query: 159 TVDKIFIRFPAKWWKDG 175
            V++    +       G
Sbjct: 293 GVNR--YEYDQLRAPVG 307

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]} Length = 383

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.0 bits (110), Expect = 3e-06
 Identities = 18/164 (10%), Positives = 42/164 (25%), Gaps = 5/164 (3%)

Query: 9   LLQGLNFGTVDKIFIRFPAKWWKDGCQGFNLYWTQQDKTDLFKDMVHVDGKPWVWGILGF 68
           + + L+     +   +    +            +        K                 
Sbjct: 143 MKELLDKLCWTESAKQLATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQE 202

Query: 69  YMDAEDPLTLLVSGQTPVDLSNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITV 128
                    +         L +++  ++ V  ID   +    V   +  +Y A  +I  +
Sbjct: 203 RKFVGGSGQVSERIMD--LLGDRVKLERPVIYIDQT-RENVLVETLNHEMYEAKYVISAI 259

Query: 129 PLGVLKSKLITFVPSLPAQKLNAIEGLNFGTVDKIFIRFPAKWW 172
           P  +     I F P LP  +   I  +    +   + R   +  
Sbjct: 260 PPTLGMK--IHFNPPLPMMRNQMITRVFPPGILTQYGRVLRQPV 301

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} Length = 370

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

 Score = 39.7 bits (91), Expect = 5e-04
 Identities = 12/63 (19%), Positives = 21/63 (33%), Gaps = 5/63 (7%)

Query: 111 VSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNAIEGLNFGTVDKIFIRFPAK 170
               +    TA  +I+      ++  LI F P L  +K +A+  +        F  F   
Sbjct: 274 TLSKETPSVTADYVIVCTTSRAVR--LIKFNPPLLPKKAHALRSVFTP---YQFQHFSDP 328

Query: 171 WWK 173
              
Sbjct: 329 LTA 331

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	412
d2v5za2	112	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	99.73
d1b5qa2	112	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	99.72
d2dw4a3	109	Lysine-specific histone demethylase 1, LSD1 {Human	99.72
d2iida2	113	L-aminoacid oxidase {Malayan pit viper (Calloselas	99.6
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	99.27
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	99.16
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	99.12
d2ivda2	108	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	98.62
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	98.6
d1seza2	112	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	98.36
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	97.57
d2dw4a3	109	Lysine-specific histone demethylase 1, LSD1 {Human	97.27
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	96.6
d1b5qa2	112	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	96.51
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	96.28
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	96.24
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	95.95
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	95.89
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	95.74
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	95.44
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	95.23
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	95.15
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	95.1
d2v5za2	112	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	94.8
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	94.47
d2iida2	113	L-aminoacid oxidase {Malayan pit viper (Calloselas	94.3
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	93.83
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	93.58
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	93.58
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	93.22
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	92.92
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	92.88
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	92.11
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	91.59
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	91.02
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	90.98
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	90.94
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	90.2
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	90.15
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	89.12
d1m6ia1	213	Apoptosis-inducing factor (AIF) {Human (Homo sapie	88.86
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	87.11
d2gjca1	311	Thiazole biosynthetic enzyme Thi4 {Baker's yeast (	86.77
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	84.59
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	83.59

>d2v5za2 d.16.1.5 (A:290-401) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: FAD-linked reductases, C-terminal domain
superfamily: FAD-linked reductases, C-terminal domain
family: L-aminoacid/polyamine oxidase
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=5.1e-18  Score=136.48  Aligned_cols=112  Identities=17%  Similarity=0.258  Sum_probs=86.7

Q ss_pred             CCcceeEEEEEcCCCccCCCCCceeEeecCCCccccccccccCCCCCccccccceeecCCCCcEEEEEecccchHHHhcC
Q psy10795        156 NFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWIAGPTARYMETL  235 (412)
Q Consensus       156 ~~g~~~KV~l~f~~~fW~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~w~~~~~~~~~~~~~~~vL~~~~~g~~a~~~~~l  235 (412)
                      +||+++||+|.|+++||+++.. .+.+..+.+             ..+....++.+...+++++|++|++|+.|..++.+
T Consensus         1 pmG~~~Kv~l~f~~~FW~~~~~-~g~~~~~~~-------------~~~~~~~~~~~~~~~~~~vL~~~~~G~~a~~~~~l   66 (112)
T d2v5za2           1 PLGSVIKCIVYYKEPFWRKKDY-CGTMIIDGE-------------EAPVAYTLDDTKPEGNYAAIMGFILAHKARKLARL   66 (112)
T ss_dssp             CBCCEEEEEEECSSCGGGGGTE-EEEEEECST-------------TCSCSEEEECCCTTSCSCEEEEEEETHHHHHHTTS
T ss_pred             CchheEEEEEEcCCCCCCCCCc-eeeEEecCC-------------CCcEEEEccCcCccCCCcEEEEEeCcHHHHHHHhC
Confidence            5899999999999999987521 222223322             12222223333334456799999999999999999


Q ss_pred             CHHHHHHHHHHHHHHHhCCCCCCCCCcEEEeecCCCCCCCccccCCC
Q psy10795        236 PMAVLQADIMRLFRHFLGGAYIIPEPIRIVRSAWSINPHFRGSYSHH  282 (412)
Q Consensus       236 sdeel~~~~l~~L~~~~g~~~~~~~~~~~~~~~W~~dp~~~G~ys~~  282 (412)
                      +++|+++.+++.|+++||. ..++.|..+.+++|.+|||++|+||.+
T Consensus        67 s~~e~~~~~l~~L~~~~g~-~~~~~~~~~~~~~W~~dp~~~GsYs~~  112 (112)
T d2v5za2          67 TKEERLKKLCELYAKVLGS-LEALEPVHYEEKNWCEEQYSGGCYTTY  112 (112)
T ss_dssp             CHHHHHHHHHHHHHHHHTC-GGGGCCSEEEEEEGGGCTTTCSSSCBC
T ss_pred             CHHHHHHHHHHHHHHHhCc-cccCCccEEEEcccCCCCccCcccccc
Confidence            9999999999999999985 346789999999999999999999874

>d1b5qa2 d.16.1.5 (A:294-405) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: FAD-linked reductases, C-terminal domain
superfamily: FAD-linked reductases, C-terminal domain
family: L-aminoacid/polyamine oxidase
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=99.72  E-value=1.2e-17  Score=134.28  Aligned_cols=111  Identities=23%  Similarity=0.442  Sum_probs=86.3

Q ss_pred             CcceeEEEEEcCCCccCCCCCceeEeecCCCccccccccccCCCCCccccccceeecCCCCcEEEEEecccchHHHhcCC
Q psy10795        157 FGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWIAGPTARYMETLP  236 (412)
Q Consensus       157 ~g~~~KV~l~f~~~fW~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~w~~~~~~~~~~~~~~~vL~~~~~g~~a~~~~~ls  236 (412)
                      ||.+.||+|.|+++||+++...+.+++..++.             .+.....+......++++|++|++|+.|++++.++
T Consensus         2 MG~~~Ki~l~F~~~FW~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~vL~~~~~G~~a~~~~~l~   68 (112)
T d1b5qa2           2 MAVYTKIFLKFPRKFWPEGKGREFFLYASSRR-------------GYYGVWQEFEKQYPDANVLLVTVTDEESRRIEQQS   68 (112)
T ss_dssp             EECEEEEEEECSSCCSCCSTTCSEEEEECSST-------------TSSCEEEECTTTSTTCCEEEEEEEHHHHHHHHTSC
T ss_pred             cccEEEEEEEECCCCCCCCCCEEEEEeecCCC-------------CeeEEEEEcccCCCCCCEEEEEeCcHHHHHHHhCC
Confidence            79999999999999998865555444333221             11111122222234567999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCCCCCCcEEEeecCCCCCCCccccCC
Q psy10795        237 MAVLQADIMRLFRHFLGGAYIIPEPIRIVRSAWSINPHFRGSYSH  281 (412)
Q Consensus       237 deel~~~~l~~L~~~~g~~~~~~~~~~~~~~~W~~dp~~~G~ys~  281 (412)
                      ++++++.+++.|+++||. ...+.|..+.+++|.+|||++|+||.
T Consensus        69 ~~~~~~~~l~~L~~~~~~-~~~~~~~~~~~t~W~~dp~~~GsYS~  112 (112)
T d1b5qa2          69 DEQTKAEIMQVLRKMFPG-KDVPDATDILVPRWWSDRFYKGTFSN  112 (112)
T ss_dssp             HHHHHHHHHHHHHHHCTT-SCCCCCSEEECCCTTTCTTTSSSEEE
T ss_pred             HHHHHHHHHHHHHHHhCc-ccccCCCEEEeccCCCCCCccccCCC
Confidence            999999999999999984 45678999999999999999999973

>d2dw4a3 d.16.1.5 (A:655-763) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: FAD-linked reductases, C-terminal domain
superfamily: FAD-linked reductases, C-terminal domain
family: L-aminoacid/polyamine oxidase
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=1.6e-17  Score=132.62  Aligned_cols=109  Identities=25%  Similarity=0.472  Sum_probs=85.0

Q ss_pred             CCcceeEEEEEcCCCccCCCCCceeEeecCCCccccccccccCCCCCccccccceeecCCCCcEEEEEecccchHHHhcC
Q psy10795        156 NFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWIAGPTARYMETL  235 (412)
Q Consensus       156 ~~g~~~KV~l~f~~~fW~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~w~~~~~~~~~~~~~~~vL~~~~~g~~a~~~~~l  235 (412)
                      +||.+.||+|.|+++||+++...++.+..+.+             ..+.  ..+..+ ..+.++|++|+.|+.|..++.+
T Consensus         1 G~G~~~Kv~l~f~~~FW~~~~~~~~~~~~~~~-------------~~~~--~~~~~~-~~~~~vL~~~~~G~~a~~~~~l   64 (109)
T d2dw4a3           1 GFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTA-------------SRGE--LFLFWN-LYKAPILLALVAGEAAGIMENI   64 (109)
T ss_dssp             EECCCEEEEEECSSCCSCTTCSEEEECCSSST-------------TTTT--TCEEEC-C--CCEEEEEECHHHHHHHTTS
T ss_pred             CCChhEEEEEEECCCCCCCCCCEeEEEecCCC-------------CceE--EeeccC-CCCCCEEEEEECcHHHHHHHhc
Confidence            48999999999999999987555554422211             1111  122222 2345699999999999999999


Q ss_pred             CHHHHHHHHHHHHHHHhCCCCCCCCCcEEEeecCCCCCCCccccCC
Q psy10795        236 PMAVLQADIMRLFRHFLGGAYIIPEPIRIVRSAWSINPHFRGSYSH  281 (412)
Q Consensus       236 sdeel~~~~l~~L~~~~g~~~~~~~~~~~~~~~W~~dp~~~G~ys~  281 (412)
                      +++++++.++++|+++||. ...+.|..+.+++|.+|||++|+|||
T Consensus        65 ~~~~~~~~~l~~L~~~~~~-~~~~~~~~~~~~~W~~dp~~~GsYSy  109 (109)
T d2dw4a3          65 SDDVIVGRCLAILKGIFGS-SAVPQPKETVVSRWRADPWARGSYSY  109 (109)
T ss_dssp             CHHHHHHHHHHHHHHHHCT-TTCCCCSEEEECCTTTCTTTSSSCEE
T ss_pred             CHHHHHHHHHHHHHHHhCc-cccCcccEEEEeccCCCCccCEecCC
Confidence            9999999999999999995 34678999999999999999999986

>d2iida2 d.16.1.5 (A:320-432) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a+b)
fold: FAD-linked reductases, C-terminal domain
superfamily: FAD-linked reductases, C-terminal domain
family: L-aminoacid/polyamine oxidase
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=99.60  E-value=4.6e-16  Score=125.04  Aligned_cols=111  Identities=13%  Similarity=0.075  Sum_probs=81.0

Q ss_pred             CCcceeEEEEEcCCCccCCCCCceeEeecCCCccccccccccCCCCCccccccceeecCCCCcEEEEEecccchHHHhcC
Q psy10795        156 NFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWIAGPTARYMETL  235 (412)
Q Consensus       156 ~~g~~~KV~l~f~~~fW~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~w~~~~~~~~~~~~~~~vL~~~~~g~~a~~~~~l  235 (412)
                      ||+++.||+|.|++|||+++....+..+++...           ...|..    ....+.+.++|++|+.|+.|.++..+
T Consensus         1 hy~~~~Kv~l~f~~~FW~~~g~~~~~~~td~~~-----------~~~~~~----~~~~~~~~~vL~~~~~g~~a~~~~~l   65 (113)
T d2iida2           1 HYRSGTKIFLTCTTKFWEDDGIHGGKSTTDLPS-----------RFIYYP----NHNFTNGVGVIIAYGIGDDANFFQAL   65 (113)
T ss_dssp             CEECEEEEEEEESSCGGGGGTCCSSEEEESSTT-----------CEEECC----SSCCTTSCEEEEEEEEHHHHHTTTTS
T ss_pred             CCccEEEEEEEcCCCCCCCcCCEeeEEEeCCCc-----------eEEEeC----CCCCCCCceEEEEEeCCchhHHHHcC
Confidence            689999999999999998753222233333321           111211    11223345799999999999999999


Q ss_pred             CHHHHHHHHHHHHHHHhCCCCC--CCCCcEEEeecCCCCCCCccccCC
Q psy10795        236 PMAVLQADIMRLFRHFLGGAYI--IPEPIRIVRSAWSINPHFRGSYSH  281 (412)
Q Consensus       236 sdeel~~~~l~~L~~~~g~~~~--~~~~~~~~~~~W~~dp~~~G~ys~  281 (412)
                      +++++++.++++|+++||....  .+.+....+++|.+|||++|+||.
T Consensus        66 ~~e~~~~~~l~~L~~~~~~~~~~~~~~~~~~~~~~W~~dp~~~GaYSs  113 (113)
T d2iida2          66 DFKDCADIVFNDLSLIHQLPKKDIQSFCYPSVIQKWSLDKYAMGGITT  113 (113)
T ss_dssp             CHHHHHHHHHHHHHHHHTCCHHHHHHHEEEEEEEEGGGCTTTCSSEEC
T ss_pred             CHHHHHHHHHHHHHHHcCCcccccccccCeEEEeecCCCCCccccCCC
Confidence            9999999999999999984110  112567889999999999999973

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=99.27  E-value=1.1e-11  Score=111.26  Aligned_cols=65  Identities=37%  Similarity=0.599  Sum_probs=59.9

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChhhhhcCcccccCCCcHHHHHHHhc
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNAIEG  154 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~~L~~~~i~f~P~Lp~~k~~ai~~  154 (412)
                      +..|+++++|..|.. .++.|.|++.+|+.+++|++|+|+|+.+|+...+.|.|+||..+..++.+
T Consensus       224 ~~~i~~~~~v~~i~~-~~~~v~v~~~~g~~~~~d~~~~~~~~~~l~~~~~~~~p~l~~~~~~ai~~  288 (347)
T d1b5qa1         224 DPRLQLNKVVREIKY-SPGGVTVKTEDNSVYSADYVMVSASLGVLQSDLIQFKPKLPTWKVRAIYQ  288 (347)
T ss_dssp             CTTEESSCCEEEEEE-CSSCEEEEETTSCEEEESEEEECSCHHHHHTTSSEEESCCCHHHHHHHHH
T ss_pred             ccccccccccccccc-cCccEEEEECCCCEEEcCEEEeecCHHHHhhcccccCCCCCHHHHHHHHh
Confidence            568999999999999 88999999999999999999999999999998889999999988888753

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=99.16  E-value=3.1e-11  Score=112.79  Aligned_cols=63  Identities=22%  Similarity=0.322  Sum_probs=53.9

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEe----CCCcEEEeCEEEEeCChhhhhcCcccccCCCcHHHHHHHhc
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSC----SDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNAIEG  154 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~----~~G~~~~ad~VIvTvP~~~L~~~~i~f~P~Lp~~k~~ai~~  154 (412)
                      +.+|++|++|++|.. ++++|+|+.    .++++++||+||+|+|+++|+.  |.|+|+||+.+.++|+.
T Consensus       249 g~~i~~~~~V~~I~~-~~~~v~v~~~~~~~~~~~~~aD~VI~A~p~~~l~~--i~~~p~l~~~~~~ai~~  315 (370)
T d2iida1         249 QDKVHFNAQVIKIQQ-NDQKVTVVYETLSKETPSVTADYVIVCTTSRAVRL--IKFNPPLLPKKAHALRS  315 (370)
T ss_dssp             GGGEESSCEEEEEEE-CSSCEEEEEECSSSCCCEEEESEEEECSCHHHHTT--SEEESCCCHHHHHHHHH
T ss_pred             CCccccCceEEEEEE-eCCeEEEEEEecCCCeEEEEeeEEEecCCHHHHhh--CccCCCCCHHHHHHHHh
Confidence            668999999999999 888888764    2346899999999999999998  78999999888777643

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.12  E-value=8.3e-11  Score=110.71  Aligned_cols=61  Identities=23%  Similarity=0.345  Sum_probs=55.8

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChhhhhcCcccccCCCcHHHHHHH
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNAI  152 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~~L~~~~i~f~P~Lp~~k~~ai  152 (412)
                      +.+|++|++|++|.. ++++|.|++.+|++++||+||+|+|+.++++  +.|.|+||..+.+++
T Consensus       221 g~~i~~~~~v~~I~~-~~~~v~v~~~~g~~~~ad~vI~a~p~~~~~~--~~~~p~l~~~~~~~~  281 (383)
T d2v5za1         221 GDRVKLERPVIYIDQ-TRENVLVETLNHEMYEAKYVISAIPPTLGMK--IHFNPPLPMMRNQMI  281 (383)
T ss_dssp             GGGEEESCCEEEEEC-SSSSEEEEETTSCEEEESEEEECSCGGGGGG--SEEESCCCHHHHHHT
T ss_pred             CCeEEecCcceEEEe-cCCeEEEEECCCCEEECCEEEECCCHHHHhh--CccCCCCCHHHHHHH
Confidence            678999999999999 8999999999999999999999999999998  689999998776544

>d2ivda2 d.16.1.5 (A:307-414) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a+b)
fold: FAD-linked reductases, C-terminal domain
superfamily: FAD-linked reductases, C-terminal domain
family: L-aminoacid/polyamine oxidase
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=98.62  E-value=8.3e-08  Score=75.18  Aligned_cols=104  Identities=13%  Similarity=0.175  Sum_probs=81.6

Q ss_pred             CCcceeEEEEEcCCCccCCCCCceeEeecCCCccccccccccCCCCCccccccceeecCCCCcEEEEEecccchHHHhcC
Q psy10795        156 NFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWIAGPTARYMETL  235 (412)
Q Consensus       156 ~~g~~~KV~l~f~~~fW~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~w~~~~~~~~~~~~~~~vL~~~~~g~~a~~~~~l  235 (412)
                      .|.++..|.|.|++.-.+. ..|||++.+..+...+.       +..|.+.+|.... +++..+|++|++|....++..+
T Consensus         1 ~Ya~vavV~l~~~~~~~~~-~~GfG~LVP~~e~~~~l-------g~~f~S~~fp~r~-p~~~~llrv~~Gg~~~~~~~~~   71 (108)
T d2ivda2           1 AYAPIAVVHLGFDAGTLPA-PDGFGFLVPAEEQRRML-------GAIHASTTFPFRA-EGGRVLYSCMVGGARQPGLVEQ   71 (108)
T ss_dssp             CBCCEEEEEEEECTTSSCC-CCSSEEECCGGGCCSCC-------EEEEHHHHCGGGB-STTCEEEEEEEECTTCGGGGGS
T ss_pred             CCCCEEEEEEEEcHHHCCC-CCceEEEccCCCCCeEE-------EEEEEcccccccc-CCCCEEEEEEeCCCCCcccccC
Confidence            4789999999999876654 47899886554422222       4578887776543 4455678899999888888999


Q ss_pred             CHHHHHHHHHHHHHHHhCCCCCCCCCcEEEeecCCC
Q psy10795        236 PMAVLQADIMRLFRHFLGGAYIIPEPIRIVRSAWSI  271 (412)
Q Consensus       236 sdeel~~~~l~~L~~~~g~~~~~~~~~~~~~~~W~~  271 (412)
                      +|+++++.++++|++++|.   ...|....+++|.+
T Consensus        72 ~d~~l~~~a~~dL~~~lgi---~~~P~~~~v~rw~~  104 (108)
T d2ivda2          72 DEDALAALAREELKALAGV---TARPSFTRVFRWPL  104 (108)
T ss_dssp             CHHHHHHHHHHHHHHHHCC---CSCCSEEEEEEESS
T ss_pred             CHHHHHHHHHHHHHHHhCC---CCCCcEEEeeECCC
Confidence            9999999999999999995   35799999999975

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.60  E-value=7.5e-09  Score=95.69  Aligned_cols=46  Identities=35%  Similarity=0.391  Sum_probs=36.1

Q ss_pred             chHHhccccccCCCCceEEEecccccCcCcccchhhhhccHHHHHHHHHHHH
Q psy10795        327 SAADLAAPVINREGRPVLLFAGEATSPHHYGTVNGAVESGARETANAIVYLR  378 (412)
Q Consensus       327 ~~~~l~~p~~~~~~~~~l~fAGe~t~~~~~g~~eGA~~SG~raA~~i~~~l~  378 (412)
                      .++.+.+|++      +||||||||+..++||||||++||+|||++|++.+.
T Consensus       403 ~~~~~~~~~~------~l~fAGe~t~~~~~g~~~GA~~SG~~aA~~Il~~~~  448 (449)
T d2dw4a2         403 SIPGAPQPIP------RLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFL  448 (449)
T ss_dssp             -------CCC------CEEECSGGGCTTSCSSHHHHHHHHHHHHHHHHHHHT
T ss_pred             cchhhcCCCC------CEEEEcCCcCCCCceehHHHHHHHHHHHHHHHHHhc
Confidence            3455667774      899999999999999999999999999999998764

>d1seza2 d.16.1.5 (A:330-441) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a+b)
fold: FAD-linked reductases, C-terminal domain
superfamily: FAD-linked reductases, C-terminal domain
family: L-aminoacid/polyamine oxidase
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=98.36  E-value=3.3e-07  Score=72.16  Aligned_cols=108  Identities=13%  Similarity=0.205  Sum_probs=81.3

Q ss_pred             CCcceeEEEEEcCCCccCCCCCceeEeecCCCccccccccccCCCCCccccccceeecCCCCcEEEEEecccchHHHhcC
Q psy10795        156 NFGTVDKIFIRFPAKWWKDGCQGFNFYWTQQDKMDLFKDMVHVDGKPWVWGILGFYMDAEDPLTLLGWIAGPTARYMETL  235 (412)
Q Consensus       156 ~~g~~~KV~l~f~~~fW~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~w~~~~~~~~~~~~~~~vL~~~~~g~~a~~~~~l  235 (412)
                      .|.++..|.|.|+++-.+....|||++.+..+...  |  ....+..|.+.++.... +.+..+|++|++|....++..+
T Consensus         1 ~Ya~va~V~l~~~~~~~~~~~~GfG~LVP~~e~~~--g--~~~lg~~f~S~~fp~r~-p~~~~ll~~~~Gg~~~~~~~~~   75 (112)
T d1seza2           1 DYVPLSVVITTFKRENVKYPLEGFGVLVPSKEQQH--G--LKTLGTLFSSMMFPDRA-PNNVYLYTTFVGGSRNRELAKA   75 (112)
T ss_dssp             CEEEEEEEEEEEEGGGBSSCCCSSEEECCGGGGGG--T--CCSSEEEEHHHHCGGGS-CTTEEEEEEEEESTTCGGGTTC
T ss_pred             CCCcEEEEEEEEchHHcCCCCCceEEEeCCcccCC--C--ceEEEEEEecccCCCcC-CCCcEEEEEEECCCCCcccccC
Confidence            37789999999999877666679998865543110  0  01124577777776543 4455678899999888888899


Q ss_pred             CHHHHHHHHHHHHHHHhCCCCCCCCCcEEEeecCCC
Q psy10795        236 PMAVLQADIMRLFRHFLGGAYIIPEPIRIVRSAWSI  271 (412)
Q Consensus       236 sdeel~~~~l~~L~~~~g~~~~~~~~~~~~~~~W~~  271 (412)
                      +|+++++.++++|++++|.   ..+|....+++|.+
T Consensus        76 ~d~~l~~~a~~dl~~~lgi---~~~P~~~~v~rw~~  108 (112)
T d1seza2          76 SRTELKEIVTSDLKQLLGA---EGEPTYVNHLYWSK  108 (112)
T ss_dssp             CHHHHHHHHHHHHHHHHCB---CSCCSSEEEEEEEE
T ss_pred             CHHHHHHHHHHHHHHHhCC---CCCccEEEEEECCc
Confidence            9999999999999999995   35788899999964

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=97.57  E-value=3.5e-05  Score=68.99  Aligned_cols=64  Identities=9%  Similarity=0.156  Sum_probs=46.6

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCC-C--cEEEeCEEEEeCChhhhhcCcccccCCCcHHHHHHHhcCCC
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSD-G--SVYTAYKIIITVPLGVLKSKLITFVPSLPAQKLNAIEGLNF  157 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~-G--~~~~ad~VIvTvP~~~L~~~~i~f~P~Lp~~k~~ai~~l~~  157 (412)
                      +.+|++|++|++|+. ++++++|++.+ |  .+++||+||+|+|+.++.++   + +++++...+.+..+..
T Consensus       233 g~~i~~~~~V~~I~~-~~~~~~v~~~~~~~~~~~~ad~VV~a~p~~~~~~L---l-~~~~~~~~~~~~~~~~  299 (347)
T d2ivda1         233 GDAAHVGARVEGLAR-EDGGWRLIIEEHGRRAELSVAQVVLAAPAHATAKL---L-RPLDDALAALVAGIYN  299 (347)
T ss_dssp             GGGEESSEEEEEEEC-C--CCEEEEEETTEEEEEECSEEEECSCHHHHHHH---H-TTTCHHHHHHHHTCCB
T ss_pred             hcccccCCEEEEEEE-eCCeEEEEEEcCCeEEEEECCEEEECCCHHHHHHh---c-cCCCHHHHHHhhccee
Confidence            568999999999999 88888776643 3  46899999999999999882   3 3455555556665433

>d2dw4a3 d.16.1.5 (A:655-763) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: FAD-linked reductases, C-terminal domain
superfamily: FAD-linked reductases, C-terminal domain
family: L-aminoacid/polyamine oxidase
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.27  E-value=7.1e-05  Score=57.39  Aligned_cols=32  Identities=19%  Similarity=0.474  Sum_probs=27.2

Q ss_pred             CccccceEEEEcCCCCccCCCcceEeeeccCC
Q psy10795         14 NFGTVDKIFIRFPAKWWKDGCQGFNLYWTQQD   45 (412)
Q Consensus        14 gfgt~~Kifl~f~~~~w~~~~~~~~~~W~~~d   45 (412)
                      |||+++||||+|++|||+.+...+..+|...+
T Consensus         1 G~G~~~Kv~l~f~~~FW~~~~~~~~~~~~~~~   32 (109)
T d2dw4a3           1 GFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTA   32 (109)
T ss_dssp             EECCCEEEEEECSSCCSCTTCSEEEECCSSST
T ss_pred             CCChhEEEEEEECCCCCCCCCCEeEEEecCCC
Confidence            79999999999999999888777777766543

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=96.60  E-value=0.0019  Score=50.05  Aligned_cols=40  Identities=15%  Similarity=0.268  Sum_probs=35.3

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeC
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITV  128 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTv  128 (412)
                      |-+|++|+.|++|+.+.++.+.|++++|++++||.||+|+
T Consensus        78 GV~v~~~~~v~~ie~~~~~~~~v~~~~G~~i~~D~Vi~AI  117 (117)
T d1aoga2          78 GIQILTKENPAKVELNADGSKSVTFESGKKMDFDLVMMAI  117 (117)
T ss_dssp             TCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECS
T ss_pred             CcEEEcCCEEEEEEEcCCCeEEEEECCCcEEEeCEEEEeC
Confidence            5689999999999873556789999999999999999986

>d1b5qa2 d.16.1.5 (A:294-405) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: FAD-linked reductases, C-terminal domain
superfamily: FAD-linked reductases, C-terminal domain
family: L-aminoacid/polyamine oxidase
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=96.51  E-value=0.00066  Score=51.99  Aligned_cols=31  Identities=26%  Similarity=0.639  Sum_probs=25.8

Q ss_pred             ccccceEEEEcCCCCccCCCcceEeeeccCC
Q psy10795         15 FGTVDKIFIRFPAKWWKDGCQGFNLYWTQQD   45 (412)
Q Consensus        15 fgt~~Kifl~f~~~~w~~~~~~~~~~W~~~d   45 (412)
                      .|+++||||+|++|||+.+...+.+.|...+
T Consensus         2 MG~~~Ki~l~F~~~FW~~~~~~~~~~~~~~~   32 (112)
T d1b5qa2           2 MAVYTKIFLKFPRKFWPEGKGREFFLYASSR   32 (112)
T ss_dssp             EECEEEEEEECSSCCSCCSTTCSEEEEECSS
T ss_pred             cccEEEEEEEECCCCCCCCCCEEEEEeecCC
Confidence            6999999999999999887777777776543

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.28  E-value=0.00059  Score=58.65  Aligned_cols=39  Identities=5%  Similarity=0.075  Sum_probs=31.7

Q ss_pred             CCcEEcCCeEEEEEecC-CCcEEEEeCCCcEEEeCEEEEe
Q psy10795         89 SNKILYKKEVNKIDWEY-QNGAAVSCSDGSVYTAYKIIIT  127 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~-~~~V~V~~~~G~~~~ad~VIvT  127 (412)
                      |++|++|++|++|..+. ++.|.+.+.+|+++.||+||++
T Consensus       250 G~~i~~~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VI~~  289 (297)
T d2bcgg1         250 GGTYMLDTPIDEVLYKKDTGKFEGVKTKLGTFKAPLVIAD  289 (297)
T ss_dssp             TCEEECSCCCCEEEEETTTTEEEEEEETTEEEECSCEEEC
T ss_pred             CCEEEeCCEeeEEEEECCCCEEEEEEcCCEEEECCEEEEC
Confidence            78999999999998732 3446655678889999999997

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.24  E-value=0.0032  Score=50.22  Aligned_cols=39  Identities=15%  Similarity=0.178  Sum_probs=36.4

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeC
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITV  128 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTv  128 (412)
                      |-++++|+.|++|+. +++++.|++.+|+++.||.||+|+
T Consensus        97 GV~~~~~~~V~~i~~-~~~~~~v~l~~G~~i~aD~Vi~A~  135 (137)
T d1m6ia2          97 GVKVMPNAIVQSVGV-SSGKLLIKLKDGRKVETDHIVAAV  135 (137)
T ss_dssp             TCEEECSCCEEEEEE-ETTEEEEEETTSCEEEESEEEECC
T ss_pred             CcEEEeCCEEEEEEe-cCCEEEEEECCCCEEECCEEEEee
Confidence            568999999999998 788999999999999999999997

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=95.95  E-value=0.0069  Score=46.68  Aligned_cols=40  Identities=10%  Similarity=0.060  Sum_probs=34.9

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeC
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITV  128 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTv  128 (412)
                      +-++++|+.|++|..++++.++|++++|+++.+|.||+|+
T Consensus        76 GV~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~D~vi~a~  115 (116)
T d1gesa2          76 GPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAI  115 (116)
T ss_dssp             SCEEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECS
T ss_pred             CCEEEeCCEEEEEEEcCCcEEEEEECCCCEEEcCEEEEec
Confidence            5689999999999983455689999999999999999986

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=95.89  E-value=0.0016  Score=57.66  Aligned_cols=36  Identities=31%  Similarity=0.440  Sum_probs=31.8

Q ss_pred             ceEEEecccccCcCcccchhhhhccHHHHHHHHHHHHhc
Q psy10795        342 PVLLFAGEATSPHHYGTVNGAVESGARETANAIVYLRRE  380 (412)
Q Consensus       342 ~~l~fAGe~t~~~~~g~~eGA~~SG~raA~~i~~~l~~~  380 (412)
                      |+||||||++.+   .++++|+.||.+||+.|+++|+..
T Consensus       337 pglf~aGd~~~g---~~~~~A~~~G~~aA~~i~~~L~~~  372 (373)
T d1seza1         337 PGLFYAGNHRGG---LSVGKALSSGCNAADLVISYLESV  372 (373)
T ss_dssp             TTEEECCSSSSC---SSHHHHHHHHHHHHHHHHHHHSSC
T ss_pred             CCEEEEecCCCc---hhHHHHHHHHHHHHHHHHHHHhcC
Confidence            479999999865   469999999999999999999753

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=95.74  E-value=0.008  Score=46.25  Aligned_cols=40  Identities=8%  Similarity=0.082  Sum_probs=33.8

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeC
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITV  128 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTv  128 (412)
                      +-+|++|+.|++|..+.++...|++++|+++.||.||+|+
T Consensus        76 GI~v~~~~~v~~i~~~~~g~~~v~~~~g~~i~~D~Vi~a~  115 (117)
T d1feca2          76 GINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAI  115 (117)
T ss_dssp             TEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECS
T ss_pred             cEEEEcCCEEEEEEECCCCEEEEEECCCCEEEcCEEEEec
Confidence            5579999999999983344557899999999999999986

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=95.44  E-value=0.015  Score=44.75  Aligned_cols=40  Identities=23%  Similarity=0.282  Sum_probs=34.1

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEE-eCEEEEeC
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYT-AYKIIITV  128 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~-ad~VIvTv  128 (412)
                      +-++++|+.|++|+...++.++|++.+|++.+ +|.||+|+
T Consensus        77 gV~i~~~~~v~~i~~~~~~~~~v~~~~G~~~~~~D~Vi~AI  117 (117)
T d1onfa2          77 NINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCV  117 (117)
T ss_dssp             TCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECC
T ss_pred             CCEEEECCEEEEEEEcCCCeEEEEECCCCEEEeCCEEEEeC
Confidence            55899999999999745567899999998874 79999986

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=95.23  E-value=0.0093  Score=52.75  Aligned_cols=41  Identities=24%  Similarity=0.404  Sum_probs=37.0

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLG  131 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~  131 (412)
                      +.+|++|++|++|.. .+++|.|+|++| ++.||+||+|+-..
T Consensus       164 Gv~i~~~~~V~~i~~-~~~~v~V~t~~g-~i~a~~VViAaG~~  204 (281)
T d2gf3a1         164 GAKVLTHTRVEDFDI-SPDSVKIETANG-SYTADKLIVSMGAW  204 (281)
T ss_dssp             TCEEECSCCEEEEEE-CSSCEEEEETTE-EEEEEEEEECCGGG
T ss_pred             cccccCCcEEEEEEE-ECCEEEEEECCc-EEEcCEEEECCCCc
Confidence            678999999999999 889999999998 79999999997543

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=95.15  E-value=0.014  Score=45.07  Aligned_cols=39  Identities=23%  Similarity=0.222  Sum_probs=33.4

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCC---cEEEeCEEEEeC
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDG---SVYTAYKIIITV  128 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G---~~~~ad~VIvTv  128 (412)
                      +-+|++|+.|++|+. .+++++|++.++   +++.||+||+|+
T Consensus        77 Gv~i~~~~~v~~i~~-~~~~v~v~~~~~~~~~~~~~D~vlvAv  118 (119)
T d3lada2          77 GLKILLGARVTGTEV-KNKQVTVKFVDAEGEKSQAFDKLIVAV  118 (119)
T ss_dssp             TEEEEETCEEEEEEE-CSSCEEEEEESSSEEEEEEESEEEECS
T ss_pred             CceeecCcEEEEEEE-eCCEEEEEEEECCCCEEEECCEEEEee
Confidence            457999999999999 888888887654   578999999986

>d2v5za2 d.16.1.5 (A:290-401) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: FAD-linked reductases, C-terminal domain
superfamily: FAD-linked reductases, C-terminal domain
family: L-aminoacid/polyamine oxidase
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.80  E-value=0.0075  Score=45.72  Aligned_cols=19  Identities=21%  Similarity=0.665  Sum_probs=17.2

Q ss_pred             ccccceEEEEcCCCCccCC
Q psy10795         15 FGTVDKIFIRFPAKWWKDG   33 (412)
Q Consensus        15 fgt~~Kifl~f~~~~w~~~   33 (412)
                      .|+++||||+|++|||..+
T Consensus         2 mG~~~Kv~l~f~~~FW~~~   20 (112)
T d2v5za2           2 LGSVIKCIVYYKEPFWRKK   20 (112)
T ss_dssp             BCCEEEEEEECSSCGGGGG
T ss_pred             chheEEEEEEcCCCCCCCC
Confidence            5899999999999999754

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=94.47  E-value=0.015  Score=51.09  Aligned_cols=41  Identities=10%  Similarity=0.112  Sum_probs=36.7

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLG  131 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~  131 (412)
                      |.+|+.+++|++|+. +++.+.|+|.+| ++.||+||+|+=..
T Consensus       165 Gv~i~~~~~V~~i~~-~~~~~~V~t~~g-~i~a~~vV~AaG~~  205 (276)
T d1ryia1         165 GAEIFEHTPVLHVER-DGEALFIKTPSG-DVWANHVVVASGVW  205 (276)
T ss_dssp             TCEEETTCCCCEEEC-SSSSEEEEETTE-EEEEEEEEECCGGG
T ss_pred             CCEEecceEEEeEEe-ecceEEEecCCe-EEEcCEEEECCCcc
Confidence            778999999999998 888899999988 79999999997653

>d2iida2 d.16.1.5 (A:320-432) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a+b)
fold: FAD-linked reductases, C-terminal domain
superfamily: FAD-linked reductases, C-terminal domain
family: L-aminoacid/polyamine oxidase
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=94.30  E-value=0.0078  Score=45.73  Aligned_cols=19  Identities=32%  Similarity=0.807  Sum_probs=17.2

Q ss_pred             ccccceEEEEcCCCCccCC
Q psy10795         15 FGTVDKIFIRFPAKWWKDG   33 (412)
Q Consensus        15 fgt~~Kifl~f~~~~w~~~   33 (412)
                      ||++.||||+|++|||..+
T Consensus         2 y~~~~Kv~l~f~~~FW~~~   20 (113)
T d2iida2           2 YRSGTKIFLTCTTKFWEDD   20 (113)
T ss_dssp             EECEEEEEEEESSCGGGGG
T ss_pred             CccEEEEEEEcCCCCCCCc
Confidence            7899999999999999654

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=93.83  E-value=0.031  Score=48.23  Aligned_cols=41  Identities=24%  Similarity=0.292  Sum_probs=35.2

Q ss_pred             CCcEEcCCeEEEEEecCCCcE-EEEeCCCcEEEeCEEEEeCCh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGA-AVSCSDGSVYTAYKIIITVPL  130 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V-~V~~~~G~~~~ad~VIvTvP~  130 (412)
                      +.+|+++++|++|.. +++.+ .|.+++|++++||+||+|+=-
T Consensus       124 gv~i~~~~~v~~i~~-~~~~~~~v~~~~g~~i~a~~vI~AtGg  165 (251)
T d2i0za1         124 GVKIRTNTPVETIEY-ENGQTKAVILQTGEVLETNHVVIAVGG  165 (251)
T ss_dssp             TCEEECSCCEEEEEE-ETTEEEEEEETTCCEEECSCEEECCCC
T ss_pred             CCcccCCcEEEEEEE-ECCEEEEEEeCCCCeEecCeEEEccCC
Confidence            668999999999998 66766 488899999999999999653

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=93.58  E-value=0.022  Score=49.76  Aligned_cols=54  Identities=13%  Similarity=0.100  Sum_probs=38.0

Q ss_pred             cCCcCCCCCCcEEcCCeEEEEEecCCCc--------EEEEe---CCCcEEEeCEEEEeCChhhhhcC
Q psy10795         81 SGQTPVDLSNKILYKKEVNKIDWEYQNG--------AAVSC---SDGSVYTAYKIIITVPLGVLKSK  136 (412)
Q Consensus        81 ~~~~~~~~~~~I~ln~~V~~I~~~~~~~--------V~V~~---~~G~~~~ad~VIvTvP~~~L~~~  136 (412)
                      ++.+.+. +.+|++|++|++|.. +.++        |.+.+   .+++++.||+||+|+|+..++..
T Consensus       236 ~l~~~l~-~~~i~~~~~V~~i~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~D~Vi~a~p~~~l~~l  300 (373)
T d1seza1         236 AICKDLR-EDELRLNSRVLELSC-SCTEDSAIDSWSIISASPHKRQSEEESFDAVIMTAPLCDVKSM  300 (373)
T ss_dssp             HHHTTSC-TTTEETTCCEEEEEE-ECSSSSSSCEEEEEEBCSSSSCBCCCEESEEEECSCHHHHHTS
T ss_pred             HHHHHhc-cceEecCCEEEEEEE-eCCcccccccceEEecccCCCCceEEECCEEEECCchHHhhhc
Confidence            3344442 668999999999998 4332        22222   23457899999999999999874

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=93.58  E-value=0.062  Score=42.06  Aligned_cols=40  Identities=25%  Similarity=0.296  Sum_probs=32.6

Q ss_pred             CCcEEcCCeEEEEEecC-CCcE-EEEeCCCcEEEeCEEEEeC
Q psy10795         89 SNKILYKKEVNKIDWEY-QNGA-AVSCSDGSVYTAYKIIITV  128 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~-~~~V-~V~~~~G~~~~ad~VIvTv  128 (412)
                      +-++++|+.|++|+... +..+ .|.+++|+++.||.||+|+
T Consensus        91 GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~vi~a~  132 (133)
T d1q1ra2          91 GVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGI  132 (133)
T ss_dssp             TCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECC
T ss_pred             ccEEEeCCeEEEEEEeCCCceEEEEECCCCCEEECCEEEEee
Confidence            56899999999998732 2344 4788999999999999986

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=93.22  E-value=0.041  Score=48.93  Aligned_cols=41  Identities=17%  Similarity=0.097  Sum_probs=35.4

Q ss_pred             CCcEEcCCeEEEEEecCCCcEE-EEeCCCcEEEeCEEEEeCChh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAA-VSCSDGSVYTAYKIIITVPLG  131 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~-V~~~~G~~~~ad~VIvTvP~~  131 (412)
                      +.+|+.+++|++|.. ++++|+ |.|.+| +++||+||+|.=..
T Consensus       162 gv~i~~~~~V~~i~~-~~~~v~~V~T~~g-~i~a~~VV~aaG~~  203 (305)
T d1pj5a2         162 GVTYRGSTTVTGIEQ-SGGRVTGVQTADG-VIPADIVVSCAGFW  203 (305)
T ss_dssp             TCEEECSCCEEEEEE-ETTEEEEEEETTE-EEECSEEEECCGGG
T ss_pred             cccccCCceEEEEEE-eCCEEEEEeccce-eEECCEEEEecchh
Confidence            778999999999999 777764 888888 79999999998553

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=92.92  E-value=0.036  Score=50.39  Aligned_cols=42  Identities=14%  Similarity=-0.089  Sum_probs=33.8

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCC---c---EEEeCEEEEeCChh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDG---S---VYTAYKIIITVPLG  131 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G---~---~~~ad~VIvTvP~~  131 (412)
                      +..|++|+.|++|+. .+++|+|++.++   +   +..||+||+|+-..
T Consensus       127 ~~~I~~~t~V~~v~~-~~~~w~Vt~~~~~~~~~~~~~~~d~VI~AtG~~  174 (335)
T d2gv8a1         127 LPFIKLATDVLDIEK-KDGSWVVTYKGTKAGSPISKDIFDAVSICNGHY  174 (335)
T ss_dssp             GGGEECSEEEEEEEE-ETTEEEEEEEESSTTCCEEEEEESEEEECCCSS
T ss_pred             hhcccCceEEEEEEe-cCCEEEEEEEecCCCCeEEEEEeeEEEEccccc
Confidence            567999999999999 888988887543   1   45799999998653

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=92.88  E-value=0.051  Score=41.39  Aligned_cols=38  Identities=13%  Similarity=0.253  Sum_probs=31.1

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeC-CC--cEEEeCEEEEe
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCS-DG--SVYTAYKIIIT  127 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~-~G--~~~~ad~VIvT  127 (412)
                      |-+|++|+.|++|+. .++++.|++. +|  ++++||.||++
T Consensus        77 GI~i~~~~~v~~i~~-~~~~~~v~~~~~g~~~~i~~D~Vlvs  117 (117)
T d1ebda2          77 GVEVVTNALAKGAEE-REDGVTVTYEANGETKTIDADYVLVT  117 (117)
T ss_dssp             TCEEEESEEEEEEEE-ETTEEEEEEEETTEEEEEEESEEEEC
T ss_pred             CCEEEcCCEEEEEEE-cCCEEEEEEEeCCCEEEEEeEEEEEC
Confidence            568999999999998 7778877764 44  46899999985

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=92.11  E-value=0.065  Score=41.30  Aligned_cols=38  Identities=16%  Similarity=0.200  Sum_probs=30.6

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeC
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITV  128 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTv  128 (412)
                      +-++++|+.|++|+. + +.+.+...+|+++.||.||+|+
T Consensus        86 gv~~~~~~~v~~i~~-~-~~~~~v~~dg~~i~~D~vi~aI  123 (123)
T d1nhpa2          86 NITIATGETVERYEG-D-GRVQKVVTDKNAYDADLVVVAV  123 (123)
T ss_dssp             TEEEEESCCEEEEEC-S-SBCCEEEESSCEEECSEEEECS
T ss_pred             CeEEEeCceEEEEEc-C-CCEEEEEeCCCEEECCEEEEEC
Confidence            558999999999986 4 4554446688899999999986

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=91.59  E-value=0.098  Score=46.85  Aligned_cols=41  Identities=17%  Similarity=0.237  Sum_probs=34.6

Q ss_pred             CCcEEcCCeEEEEEec-CCCcEEEEeCCCcEEEeCEEEEeCC
Q psy10795         89 SNKILYKKEVNKIDWE-YQNGAAVSCSDGSVYTAYKIIITVP  129 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~-~~~~V~V~~~~G~~~~ad~VIvTvP  129 (412)
                      ...|++|++|+++.++ ..+.|+|++.++.++++|+||+|+=
T Consensus       101 ~~~I~f~t~V~~~~~de~~~~W~V~~~~~~~~~~~~~i~atG  142 (298)
T d1w4xa1         101 RSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASG  142 (298)
T ss_dssp             GGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCC
T ss_pred             cccccCCcEEEEEEEecCCCceeeccccccccccceEEEeec
Confidence            3469999999999973 3356999999999999999999964

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.02  E-value=0.14  Score=39.31  Aligned_cols=38  Identities=8%  Similarity=0.080  Sum_probs=28.8

Q ss_pred             CCcEEcCCeEEEEEecCCCc--EEEEeCCC-----cEEEeCEEEEe
Q psy10795         89 SNKILYKKEVNKIDWEYQNG--AAVSCSDG-----SVYTAYKIIIT  127 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~--V~V~~~~G-----~~~~ad~VIvT  127 (412)
                      |-+|++|+.|++|+. .+++  +.++..++     ++++||.||+|
T Consensus        78 GV~i~~~~~v~~v~~-~~~~~~v~~~~~~~~~~~~~~ie~D~vlvA  122 (122)
T d1v59a2          78 GLDFKLSTKVISAKR-NDDKNVVEIVVEDTKTNKQENLEAEVLLVA  122 (122)
T ss_dssp             TCEEECSEEEEEEEE-ETTTTEEEEEEEETTTTEEEEEEESEEEEC
T ss_pred             cceEEeCCEEEEEEE-eCCCcEEEEEEEeCCCCCeEEEEeCEEEEC
Confidence            568999999999998 5544  44555443     47899999986

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=90.98  E-value=0.14  Score=39.19  Aligned_cols=39  Identities=21%  Similarity=0.337  Sum_probs=30.4

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEe--C-CC--cEEEeCEEEEeC
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSC--S-DG--SVYTAYKIIITV  128 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~--~-~G--~~~~ad~VIvTv  128 (412)
                      |-+|++|+.|++|+. .+++++|+.  . +|  ++++||+|++|.
T Consensus        80 GI~i~~~~~v~~i~~-~~~~~~v~~~~~~~g~~~~i~~D~vLvAA  123 (123)
T d1dxla2          80 GMKFKLKTKVVGVDT-SGDGVKLTVEPSAGGEQTIIEADVVLVSA  123 (123)
T ss_dssp             SCCEECSEEEEEEEC-SSSSEEEEEEESSSCCCEEEEESEEECCC
T ss_pred             cceEEcCCceEEEEE-ccCeEEEEEEECCCCeEEEEEcCEEEEcC
Confidence            558999999999998 777776553  3 33  358999999873

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=90.94  E-value=0.08  Score=40.98  Aligned_cols=39  Identities=8%  Similarity=0.158  Sum_probs=31.7

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCC--C--cEEEeCEEEEeC
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSD--G--SVYTAYKIIITV  128 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~--G--~~~~ad~VIvTv  128 (412)
                      +-++++|+.|++|+. .++++.|++.+  |  ++++||+||+|+
T Consensus        81 gv~~~~~~~v~~v~~-~~~g~~v~~~~~~g~~~~i~~D~vl~A~  123 (125)
T d1ojta2          81 FDNIMVNTKTVAVEP-KEDGVYVTFEGANAPKEPQRYDAVLVAA  123 (125)
T ss_dssp             EEEEECSCEEEEEEE-ETTEEEEEEESSSCCSSCEEESCEEECC
T ss_pred             CcccccCcEEEEEEE-cCCcEEEEEEeCCCCeEEEEcCEEEEec
Confidence            457999999999998 77777776543  3  479999999986

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=90.20  E-value=0.21  Score=42.64  Aligned_cols=42  Identities=14%  Similarity=0.002  Sum_probs=37.9

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCChh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPLG  131 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~~  131 (412)
                      ...+++++.|+.|.. .+++|+|+++||+++++|.+|.|-...
T Consensus       110 ~~~~~~~~~v~~~~~-~~~~v~v~~~dG~~~~~d~~v~adG~~  151 (265)
T d2voua1         110 PERYHTSKCLVGLSQ-DSETVQMRFSDGTKAEANWVIGADGGA  151 (265)
T ss_dssp             STTEETTCCEEEEEE-CSSCEEEEETTSCEEEESEEEECCCTT
T ss_pred             cceeecCcEEEEEEe-eCCceEEEECCCCEEEEEEEecccccc
Confidence            567999999999999 889999999999999999999997653

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=90.15  E-value=0.21  Score=38.15  Aligned_cols=35  Identities=14%  Similarity=0.215  Sum_probs=29.5

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeC
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITV  128 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTv  128 (412)
                      |-+|++|+.|+++..   +  .|++.||+++.||.||+|+
T Consensus        86 GV~i~~~~~v~~~~~---~--~v~l~dg~~i~~D~vi~a~  120 (121)
T d1d7ya2          86 GVDLRFERSVTGSVD---G--VVLLDDGTRIAADMVVVGI  120 (121)
T ss_dssp             TCEEEESCCEEEEET---T--EEEETTSCEEECSEEEECS
T ss_pred             CcEEEeCCEEEEEeC---C--EEEECCCCEEECCEEEEee
Confidence            557999999999875   2  3677899999999999986

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=89.12  E-value=0.19  Score=38.04  Aligned_cols=39  Identities=15%  Similarity=0.176  Sum_probs=28.8

Q ss_pred             CCcEEcCCeEEEEEecCCCc-EE-E---EeCCCcEEEeCEEEEeC
Q psy10795         89 SNKILYKKEVNKIDWEYQNG-AA-V---SCSDGSVYTAYKIIITV  128 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~-V~-V---~~~~G~~~~ad~VIvTv  128 (412)
                      +-++++|+.|++|+. ++++ +. +   ...++++++||+||+|+
T Consensus        77 gI~v~~~~~v~~i~~-~~~~~~~~~~~~~~~~~~~i~~D~Vi~a~  120 (121)
T d1mo9a2          77 GMEIISGSNVTRIEE-DANGRVQAVVAMTPNGEMRIETDFVFLGL  120 (121)
T ss_dssp             TCEEESSCEEEEEEE-CTTSBEEEEEEEETTEEEEEECSCEEECC
T ss_pred             ccEEEcCCEEEEEEe-cCCceEEEEEEEeCCCCEEEEcCEEEEEE
Confidence            457999999999998 5543 32 1   12345679999999986

>d1m6ia1 c.3.1.5 (A:128-263,A:401-477) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.86  E-value=0.19  Score=42.27  Aligned_cols=39  Identities=31%  Similarity=0.270  Sum_probs=32.7

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCCCcEEEeCEEEEeCCh
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSDGSVYTAYKIIITVPL  130 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~G~~~~ad~VIvTvP~  130 (412)
                      +-++++++.|++|+. .++  +|++.+|+++.+|.||+|+-.
T Consensus        97 gI~~~~g~~V~~id~-~~~--~V~l~dG~~i~~d~lViAtG~  135 (213)
T d1m6ia1          97 GVAVLTGKKVVQLDV-RDN--MVKLNDGSQITYEKCLIATGG  135 (213)
T ss_dssp             EEEEEETCCEEEEEG-GGT--EEEETTSCEEEEEEEEECCCE
T ss_pred             CeEEEeCCEEEEeec-cCc--eeeeccceeeccceEEEeeee
Confidence            457999999999987 444  567889999999999999774

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=87.11  E-value=0.26  Score=42.33  Aligned_cols=40  Identities=23%  Similarity=0.369  Sum_probs=30.4

Q ss_pred             CCcEEcCCeEEEEEecCCCc--E-EEEeCCCcEEEeCEEEEeCC
Q psy10795         89 SNKILYKKEVNKIDWEYQNG--A-AVSCSDGSVYTAYKIIITVP  129 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~--V-~V~~~~G~~~~ad~VIvTvP  129 (412)
                      +.+|+++++|++|.+ .+++  + .+...++.+++||+||+|+=
T Consensus       123 gV~i~~~~~V~~i~~-~~~~~~v~~~~~~~~~~~~a~~VIiAtG  165 (253)
T d2gqfa1         123 GAKILLRSEVSQVER-IQNDEKVRFVLQVNSTQWQCKNLIVATG  165 (253)
T ss_dssp             TCEEECSCCEEEEEE-CCSCSSCCEEEEETTEEEEESEEEECCC
T ss_pred             CCCeecCceEEEEEe-ecCCceeEEEEecCCEEEEeCEEEEcCC
Confidence            568999999999998 4443  2 12344667999999999975

>d2gjca1 c.3.1.6 (A:16-326) Thiazole biosynthetic enzyme Thi4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=86.77  E-value=0.097  Score=46.86  Aligned_cols=38  Identities=16%  Similarity=0.176  Sum_probs=29.7

Q ss_pred             CceEEEecccccCc----Cc-ccchhhhhccHHHHHHHHHHHH
Q psy10795        341 RPVLLFAGEATSPH----HY-GTVNGAVESGARETANAIVYLR  378 (412)
Q Consensus       341 ~~~l~fAGe~t~~~----~~-g~~eGA~~SG~raA~~i~~~l~  378 (412)
                      .|+||++|++....    -. .++-+++.||++||+.|++.|.
T Consensus       268 ~pgl~~~Gdaa~~v~g~~r~G~t~g~m~~sG~~aA~~i~~~l~  310 (311)
T d2gjca1         268 VDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFA  310 (311)
T ss_dssp             STTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCEEEEeeecCcccCcCCccHHHHHHHHHHHHHHHHHHHHhc
Confidence            46899999976421    11 2677789999999999999886

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.59  E-value=0.6  Score=35.52  Aligned_cols=39  Identities=15%  Similarity=0.195  Sum_probs=30.2

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEe---CCCc------EEEeCEEEEeC
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSC---SDGS------VYTAYKIIITV  128 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~---~~G~------~~~ad~VIvTv  128 (412)
                      +-+|++|+.|++|.. .++++.++.   .+|+      ...+|+||+|+
T Consensus        77 Gv~i~~~~~v~~i~~-~~~g~~v~~~~~~~g~~~~~~~~~~~D~vl~a~  124 (125)
T d3grsa2          77 GVEVLKFSQVKEVKK-TLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAI  124 (125)
T ss_dssp             TCEEETTEEEEEEEE-ETTEEEEEEEECCTTSCCEEEEEEEESEEEECS
T ss_pred             CCEEEeCCEEEEEEE-cCCeEEEEEEEccCCcCcCccccccCCEEEEEe
Confidence            568999999999998 777776553   3342      46899999986

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=83.59  E-value=0.26  Score=37.08  Aligned_cols=37  Identities=8%  Similarity=0.040  Sum_probs=26.8

Q ss_pred             CCcEEcCCeEEEEEecCCCcEEEEeCC--CcEEEeCEEEEeC
Q psy10795         89 SNKILYKKEVNKIDWEYQNGAAVSCSD--GSVYTAYKIIITV  128 (412)
Q Consensus        89 ~~~I~ln~~V~~I~~~~~~~V~V~~~~--G~~~~ad~VIvTv  128 (412)
                      +-++++++.|++|+.   +...+...+  ++++.||.||+|+
T Consensus        76 gV~i~~~~~V~~i~~---~~~~~~~~~~~~~~i~~D~vi~A~  114 (115)
T d1lvla2          76 GIALHLGHSVEGYEN---GCLLANDGKGGQLRLEADRVLVAV  114 (115)
T ss_dssp             TCEEETTCEEEEEET---TEEEEECSSSCCCEECCSCEEECC
T ss_pred             cceEEcCcEEEEEcC---CeEEEEEcCCCeEEEEcCEEEEec
Confidence            568999999999964   333333333  3579999999986