Psyllid ID: psy10865

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------
Protein Sequence
MVRPVAAATFLDLEDEKDTSELNTTVHYPSVDWTLENDFPENAPVDSIPWRPWGAGRHLGLTVVLDANIEEYFCSSEASYGFKSIVLTTPSLVLKPYRDLLPPAILNCANVCLTRSALCAFIVTIRRGIVYWNVRRTLRLDWTLENDFPENAPVDSIPWRPWGAGRHLGLTVVLDANIEEYFCSSEASYGFKLLLQNPVETPKLAAFGELISPGRESLIVIKPIINKSNPSIATSDPELRQCLFNKERALRFYRHYTQRNCILECEANFTLSFCQCVMYFMPKDRFTRICGKKDTDCADKAKLAMEMRLSQNLSNISKIFNDTTQKPNCGCLPGCFSLGYSKTQSSSTLAENPRIKKRYLAGKSLEYFRMASTSIVTESTPAVANHDEPDIVLNSNQKQNYKPKESAFNQQKLPAWQPILTAGTVMPAFFTFGLFFIPIGVGLVYFADNVKELSLDYTHCLSVEQPDKTCAQIINNSRQMNCTCELQFALSEEIEGNVYIYYGLTNFYQNHRRYVKSRDDLQLTATHSFNLLQPCTLAMYLSVAPCGAIANSLFSDSFKIFNDKNKEVPVLRTGIAWPSDKAVKFHNPPGPDLKEAFKNFAKPTDWKKNIWELDPENPDNNGFQNEDFIVWMRTAALPNFRKLYRRVNHEVEGYKSGLPAVKIKKKE
Secondary Structure (PSIPRED)
cccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccccHHHHcccccccHHHHHHHHccccccccccccccccccccccccEEcccccHHHcccccccEEccccccccccccccccccccccccccccccccccccccEEEEEEcccccccccccccccEEEEEEcccccccccccEEEEccccEEEEEEEEEEEEccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHccccccccccccccccccccccccccEEEEEcEEcccccccccHHHHHccccccHHHEEEEccccccccccccccccccccccccccccccccccHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEccccccccccccccEEEcccccccccEEEEEEEEcccccccEEEEEEEccccccHHHHHHcccHHHHccccccccccccccccccEEEEcccccccccccEEEEccccccEEEEEcccccccccccccccccccccHHHHccccccccccccccccccccccccccccccccEEEEcccccccHHHHHHHHcccccccccccEEEEEEEcc
Secondary Structure Prediction (SSPRO)
ccccEEEEEEEcccccccccccccEEccccccccccccccccccccccccccccccccccEEEEEEccHHHHEcccccccccEEEEEcccccEcccHHccccHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEEHHHEEEcccccccccccccccccccccccccccccEEEEEEccHHHHccccHHHHHHHHHHccccccHHHHHHHHHccccccEEEEEEEEEcccccccccccHHHHHHHccHHHHHHHHHHHHHHHHHHEHHHcEEEEHcHEEEEEccccccEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccEEccccccccccHccccccHHHHEccccHHHHHHHHHHHHHcccccHHcccccccccccccccccccccccHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEcccccccccccccHHHHEccccccccEEEEEEEEcccccccEEEEEEcccHHHcccHEEEEccHHHHcccccccccccccccccccEcccHHHHHHcccccEEEEccccccEEEccccEEcccccccEccccccccHHHHHccccccccccccccccccccccccccccHHHHHHHHHHccHHHHHHHHHHHccccccccccccEEccccc
Coil and Loop (DISEMBL)
mvrpvaaatfldledekdtselnttvhypsvdwtlendfpenapvdsipwrpwgagrhlGLTVVLDANIEEYfcsseasygfksivlttpslvlkpyrdllppailncANVCLTRSALCAFIVTIRRGIVYWNVRRTLRLdwtlendfpenapvdsipwrpwgagrhlGLTVVLDANIEEYFCSSEASYGFKLLlqnpvetpklaafgelispgreslivikpiinksnpsiatsdpeLRQCLFNKERALRFYRHYTQRNCILECEANFTLSFCQCvmyfmpkdrftricgkkdtdCADKAKLAMEMRLSQNLSNISKIFndttqkpncgclpgcfslgysktqssstlaenprikkRYLAGKSLEYFRMAStsivtestpavanhdepdivlnsnqkqnykpkesafnqqklpawqpiltagtvmpafftfglffiPIGVGLVYFADNVKELSLDYThclsveqpdktCAQIINnsrqmnctCELQFALSEEIEGNVYIYYGLTNFyqnhrryvksrddlqltathsfnllqpctlamylsvapcgaianslfsdsfkifndknkevpvlrtgiawpsdkavkfhnppgpdlKEAFKnfakptdwkkniweldpenpdnngfqneDFIVWMRTAALPNFRKLYRRVNHevegyksglpavkikkke
Flexible Loop (DISEMBL)
mvrpvaaatfldledekdtselnttvhypsvdwTLENDFPENAPVDSIPWRPWGAGRHLGLTVVLDANIEEYFCSSEASYGFKSIVLTTPSLVLKPYRDLLPPAILNCANVCLTRSALCAFIVTIRRGIVYWNVRRTLRLDWtlendfpenapvdsipwrpWGAGRHLGLTVVLDANIEEYFCSSEASYGFKLLLQNPVETPKLAAFGELISPGRESLIVIKPIINKsnpsiatsdpeLRQCLFNKERALRFYRHYTQRNCILECEANFTLSFCQCVMYFMPKDRFTRICGKKDTDCADKAKLAMEMRLSQNLSNISKIFNDTTQKPNCGCLPGCFSLGYSKTqssstlaenprikKRYLAGKSLEYFRMASTSIVTESTPAVANHDEPDIVLNSNQKQNYKPKESAFNQQKLPAWQPILTAGTVMPAFFTFGLFFIPIGVGLVYFADNVKELSLDYTHCLSVEQPDKTCAQIINNSRQMNCTCELQFALSEEIEGNVYIYYGLTNFYQNHRRYVKSRDDLQLTATHSFNLLQPCTLAMYLSVAPCGAIANSLFSDSFKIFNDKNKEVPVLRTgiawpsdkaVKFHNPPGPDLKEAFKNFAKPTDWKKNIWELDPENPDNNGFQNEDFIVWMRTAALPNFRKLYRRVNhevegyksglpavkikkke
Low Complexity Region (SEG)
MVRPVAAATFLDLEDEKDTSELNTTVHYPSVDWTLENDFPENAPVDSIPWRPWGAGRHLGLTVVLDANIEEYFCSSEASYGFKSIVLTTPSLVLKPYRDLLPPAILNCANVCLTRSALCAFIVTIRRGIVYWNVRRTLRLDWTLENDFPENAPVDSIPWRPWGAGRHLGLTVVLDANIEEYFCSSEASYGFKLLLQNPVETPKLAAFGELISPGRESLIVIKPIINKSNPSIATSDPELRQCLFNKERALRFYRHYTQRNCILECEANFTLSFCQCVMYFMPKDRFTRICGKKDTDCADKAKLAMEMRLSQNLSNISKIFNDTTQKPNCGCLPGCFSLGYSKTQSSSTLAENPRIKKRYLAGKSLEYFRMASTSIVTESTPAVANHDEPDIVLNSNQKQNYKPKESAFNQQKLPAWQPILTAGTVMPAFFTFGLFFIPIGVGLVYFADNVKELSLDYTHCLSVEQPDKTCAQIINNSRQMNCTCELQFALSEEIEGNVYIYYGLTNFYQNHRRYVKSRDDLQLTATHSFNLLQPCTLAMYLSVAPCGAIANSLFSDSFKIFNDKNKEVPVLRTGIAWPSDKAVKFHNPPGPDLKEAFKNFAKPTDWKKNIWELDPENPDNNGFQNEDFIVWMRTAALPNFRKLYRRVNHEVEGYKSGLPAVKIKKKE
Disordered region (IsUnstruct)
*********************LNTTVHYPSVDWTLENDFPENAPVDSIPWRPWGAGRHLGLTVVLDANIEEYFCSSEASYGFKSIVLTTPSLVLKPYRDLLPPAILNCANVCLTRSALCAFIVTIRRGIVYWNVRRTLRLDWTLENDFPENAPVDSIPWRPWGAGRHLGLTVVLDANIEEYFCSSEASYGFKLLLQNPVETPKLAAFGELISPGRESLIVIKPIINKSN**IA***PELRQCLFNKERALRFYRHYTQRNCILECEANFTLSFCQCVMYFMPKDRFTRICGKKDTDCADKAKLAMEMRLSQNLSNISKIFNDTTQKPNCGCLPGCFSLGYS***************KRYLAGKSLEYFRMASTSIV***********************************KLPAWQPILTAGTVMPAFFTFGLFFIPIGVGLVYFADNVKELSLDYTHCLSVEQPDKTCAQIINNSRQMNCTCELQFALSEEIEGNVYIYYGLTNFYQNHRRYVKSRDDLQLTATHSFNLLQPCTLAMYLSVAPCGAIANSLFSDSFKIFNDKNKEVPVLRTGIAWPSDKAVKFH*********AFKNFAKPTDWKKNIWELD******NGFQNEDFIVWMRTAALPNFRKLYRRVNHEVEGYK************
Disordered Region (DISOPRED)
*****AAATFLDLEDEKDTSELNTTVHYPSVDWTLENDFPENAPVDSIPWRPWGAGRHLGLTVVLDANIEEYFCSSEASYGFKSIVLTTPSLVLKPYRDLLPPAILNCANVCLTRSALCAFIVTIRRGIVYWNVRRTLRLDWTLENDFPENAPVDSIPWRPWGAGRHLGLTVVLDANIEEYFCSSEASYGFKLLLQNPVETPKLAAFGELISPGRESLIVIKPIINKSNPSIATSDPELRQCLFNKERALRFYRHYTQRNCILECEANFTLSFCQCVMYFMPKDRFTRICGKKDTDCADKAKLAMEMRLSQNLSNISKIFNDTTQKPNCGCLPGCFSLGYSKTQSSSTLAENPRIKKRYLAGKSLEYFRMASTSI*************************YKPKESAFNQQKLPAWQPILTAGTVMPAFFTFGLFFIPIGVGLVYFADNVKELSLDYTHCLSVEQPDKTCAQIINNSRQMNCTCELQFALSEEIEGNVYIYYGLTNFYQNHRRYVKSRDDLQLTATHSFNLLQPCTLAMYLSVAPCGAIANSLFSDSFKIFNDKNKEVPVLRTGIAWPSDKAVKFHNPPGPDLKEAFKNFAKPTDWKKNIWELDPENPDNNGFQNEDFIVWMRTAALPNFRKLYRRVNHEVEGYKSGLPAVKIKKK*
Disordered Region (DISEMBL)
MVRPVAAATFLDLEDEKDTSELNTTVHYPSVDWTLENDFPENAPVDSIPWRPWGAGRHLGLTVVLDANIEEYFCSSEASYGFKSIVLTTPSLVLKPYRDLLPPAILNCANVCLTRSALCAFIVTIRRGIVYWNVRRTLRLDWTLENDFPENAPVDSIPWRPWGAGRHLGLTVVLDANIEEYFCSSEASYGFKLLLQNPVETPKLAAFGELISPGRESLIVIKPIINKSNPSIATSDPELRQCLFNKERALRFYRHYTQRNCILECEANFTLSFCQCVMYFMPKDRFTRICGKKDTDCADKAKLAMEMRLSQNLSNISKIFNDTTQKPNCGCLPGCFSLGYSK*********NPRIKKRYLAGKSLEYFRMASTSIVTESTPAVANHDEPDIVLNSNQKQNYKPKESAFNQQKLPAWQPILTAGTVMPAFFTFGLFFIPIGVGLVYFADNVKELSLDYTHCLSVEQPDKTCAQIINNSRQMNCTCELQFALSEEIEGNVYIYYGLTNFYQNHRRYVKSRDDLQLTATHSFNLLQPCTLAMYLSVAPCGAIANSLFSDSFKIFNDKNKEVPVLRTGIAWPSDKAVKFHNPPGPDLKEAFKNFAKPTDWKKNIWELDPENPDNNGFQNEDFIVWMRTAALPNFRKLYRRVNHEVEGYKSGLPAVKIKKKE
Disordered Region (DISPRO)
*VRPVAAATFLDLEDEKDTSELNTTVHYPSVDWTLENDFPENAPVDSIPWRPWGAGRHLGLTVVLDANIEEYFCSSEASYGFKSIVLTTPSLVLKPYRDLLPPAILNCANVCLTRSALCAFIVTIRRGIVYWNVRRTLRLDWTLENDFPENAPVDSIPWRPWGAGRHLGLTVVLDANIEEYFCSSEASYGFKLLLQNPVETPKLAAFGELISPGRESLIVIKPIINKSNPSIATSDPELRQCLFNKERALRFYRHYTQRNCILECEANFTLSFCQCVMYFMPKDRFTRICGKKDTDCADKAKLAMEMRLSQNLSNISKIFNDTTQKPNCGCLPGCFSLGYSKTQSSSTLAENPRIKKRYLAGKSLEYFRMASTSIVTE************************PKESAFNQQKLPAWQPILTAGTVMPAFFTFGLFFIPIGVGLVYFADNVKELSLDYTHCLSVEQPDKTCAQIINNSRQMNCTCELQFALSEEIEGNVYIYYGLTNFYQNHRRYVKSRDDLQLTATHSFNLLQPCTLAMYLSVAPCGAIANSLFSDSFKIFNDKNKEVPVLRTGIAWPSDKAVKFHNPPGPDLKEAFKNFAKPTDWKKNIWELDPENPDNNGFQNEDFIVWMRTAALPNFRKLYRRVNHEVEGYKSGLPAVKI****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MVRPVAAATFLDLEDEKDTSELNTTVHYPSVDWTLENDFPENAPVDSIPWRPWGAGRHLGLTVVLDANIEEYFCSSEASYGFKSIVLTTPSLVLKPYRDLLPPAILNCANVCLTRSALCAFIVTIRRGIVYWNVRRTLRLDWTLENDFPENAPVDSIPWRPWGAGRHLGLTVVLDANIEEYFCSSEASYGFKLLLQNPVETPKLAAFGELISPGRESLIVIKPIINKSNPSIATSDPELRQCLFNKERALRFYRHYTQRNCILECEANFTLSFCQCVMYFMPKDRFTRICGKKDTDCADKAKLAMEMRLSQNLSNISKIFNDTTQKPNCGCLPGCFSLGYSKTQSSSTLAENPRIKKRYLAGKSLEYFRMASTSIVTESTPAVANHDEPDIVLNSNQKQNYKPKESAFNQQKLPAWQPILTAGTVMPAFFTFGLFFIPIGVGLVYFADNVKELSLDYTHCLSVEQPDKTCAQIINNSRQMNCTCELQFALSEEIEGNVYIYYGLTNFYQNHRRYVKSRDDLQLTATHSFNLLQPCTLAMYLSVAPCGAIANSLFSDSFKIFNDKNKEVPVLRTGIAWPSDKAVKFHNPPGPDLKEAFKNFAKPTDWKKNIWELDPENPDNNGFQNEDFIVWMRTAALPNFRKLYRRVNHEVEGYKSGLPAVKIKKKE
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	667	2.2.26 [Sep-21-2011]
Q8VEK0	364	Cell cycle control protei	yes	N/A	0.361	0.662	0.507	4e-60
Q3MIR4	351	Cell cycle control protei	yes	N/A	0.398	0.757	0.446	8e-60
Q8BHG3	353	Cell cycle control protei	no	N/A	0.398	0.753	0.443	3e-59
Q5F362	372	Cell cycle control protei	yes	N/A	0.359	0.645	0.519	5e-58
Q5R6C0	361	Cell cycle control protei	no	N/A	0.380	0.703	0.501	1e-57
Q9NV96	361	Cell cycle control protei	no	N/A	0.380	0.703	0.498	7e-57
Q2T9P5	343	Cell cycle control protei	no	N/A	0.374	0.728	0.429	1e-54
Q6AY41	328	Cell cycle control protei	no	N/A	0.325	0.661	0.479	3e-51
Q9D4D7	342	Cell cycle control protei	no	N/A	0.376	0.733	0.415	1e-50
Q95JK4	344	Cell cycle control protei	N/A	N/A	0.373	0.723	0.404	5e-50

>sp|Q8VEK0|CC50A_MOUSE Cell cycle control protein 50A OS=Mus musculus GN=Tmem30a PE=1 SV=1

 Score =  233 bits (594), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 131/258 (50%), Positives = 174/258 (67%), Gaps = 17/258 (6%)

Query: 402 KPKESAFNQQKLPAWQPILTAGTVMPAFFTFGLFFIPIGVGLVYFADNVKELSLDYTHCL 461
           +P  +AF QQ+LPAWQPILTAGTV+P FF  GL FIPIG+G+   ++N++E+ +DYT   
Sbjct: 27  RPDNTAFKQQRLPAWQPILTAGTVLPTFFIIGLIFIPIGIGIFVTSNNIREIEIDYTGT- 85

Query: 462 SVEQPDKTCAQIINNSRQMNCTCELQFALSEEIEGNVYIYYGLTNFYQNHRRYVKSRDDL 521
              +P   C + ++     +C C + F L +  EGNV++YYGL+NFYQNHRRYVKSRDD 
Sbjct: 86  ---EPSSPCNKCLS-PNVTSCACTINFTLKQSFEGNVFMYYGLSNFYQNHRRYVKSRDDS 141

Query: 522 QLTATHSFNL-----LQPCTLAMYLSVAPCGAIANSLFSDSFKIFNDKNKE------VPV 570
           QL    S  L      +P        +APCGAIANS+F+D+ +++   N+       +P+
Sbjct: 142 QLNGDPSALLNPSKECEPYRRNEDRPIAPCGAIANSMFNDTLELYLVANESDPKPIPIPL 201

Query: 571 LRTGIAWPSDKAVKFHNPPGPD-LKEAFKNFAKPTDWKKNIWELDPENPDNNGFQNEDFI 629
            + GIAW +DK VKF NPPG + L+E FK+  KP +W K ++ELDPE+  NNGF NEDFI
Sbjct: 202 KKKGIAWWTDKNVKFRNPPGKESLEEKFKDTIKPVNWHKAVYELDPEDESNNGFINEDFI 261

Query: 630 VWMRTAALPNFRKLYRRV 647
           VWMRTAALP FRKLYR +
Sbjct: 262 VWMRTAALPTFRKLYRLI 279

Mus musculus (taxid: 10090)

>sp|Q3MIR4|CC50B_HUMAN Cell cycle control protein 50B OS=Homo sapiens GN=TMEM30B PE=2 SV=1

 Score =  232 bits (591), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 126/282 (44%), Positives = 170/282 (60%), Gaps = 16/282 (5%)

Query: 391 IVLNSNQKQNYKPKESAFNQQKLPAWQPILTAGTVMPAFFTFGLFFIPIGVGLVYFADNV 450
           +  ++  +  ++P  +AF QQ+LPAWQP+L+A   +P FF  GL FI +G+GL Y ++ +
Sbjct: 1   MTWSATARGAHQPDNTAFTQQRLPAWQPLLSASIALPLFFCAGLAFIGLGLGLYYSSNGI 60

Query: 451 KELSLDYTHCLSVEQPDKTCAQIINNSRQMNCTCELQFALSEEIEGNVYIYYGLTNFYQN 510
           KEL  DYT            A     +    C+C   F+L E  +G VY+YY LTNFYQN
Sbjct: 61  KELEYDYTGDPGTGNCSVCAAAGQGRALPPPCSCAWYFSLPELFQGPVYLYYELTNFYQN 120

Query: 511 HRRYVKSRDDLQLTAT-----HSFNLLQPCTL-AMYLSVAPCGAIANSLFSDSFKIFNDK 564
           +RRY  SRDD QL+       H  N   P    A  L +APCGAIANSLF+DSF +++ +
Sbjct: 121 NRRYGVSRDDAQLSGLPSALRHPVNECAPYQRSAAGLPIAPCGAIANSLFNDSFSLWHQR 180

Query: 565 NK-----EVPVLRTGIAWPSDKAVKFHNPP--GPDLKEAFKNFAKPTDWKKNIWELDPEN 617
                  EVP+ R+GIAW +D  VKF NPP     L  AF+  A P +W++ ++EL P+ 
Sbjct: 181 QPGGPYVEVPLDRSGIAWWTDYHVKFRNPPLVNGSLALAFQGTAPPPNWRRPVYELSPD- 239

Query: 618 PDNNGFQNEDFIVWMRTAALPNFRKLYRRVNHEVEGYKSGLP 659
           P+N GF N+DF+VWMRTAALP FRKLY R+      Y +GLP
Sbjct: 240 PNNTGFINQDFVVWMRTAALPTFRKLYARIRQ--GNYSAGLP 279

Homo sapiens (taxid: 9606)

>sp|Q8BHG3|CC50B_MOUSE Cell cycle control protein 50B OS=Mus musculus GN=Tmem30b PE=2 SV=1

 Score =  230 bits (586), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 125/282 (44%), Positives = 167/282 (59%), Gaps = 16/282 (5%)

Query: 391 IVLNSNQKQNYKPKESAFNQQKLPAWQPILTAGTVMPAFFTFGLFFIPIGVGLVYFADNV 450
           +  ++  +  ++P  +AF QQ+LPAWQP+L+AG  +P FF  GL FI +G+GL Y ++ +
Sbjct: 1   MTWSATARGAHQPDNTAFTQQRLPAWQPLLSAGIALPLFFCAGLAFIGLGLGLFYSSNGI 60

Query: 451 KELSLDYTHCLSVEQPDKTCAQIINNSRQMNCTCELQFALSEEIEGNVYIYYGLTNFYQN 510
           KEL  DYT            A+    +    C C   F L E   G VY+YY L+NFYQN
Sbjct: 61  KELEYDYTGNPGTGDCSVCAAKGQGRAPPPGCACSWSFTLPELFPGPVYLYYELSNFYQN 120

Query: 511 HRRYVKSRDDLQLTAT-----HSFNLLQPCTL-AMYLSVAPCGAIANSLFSDSFKIFNDK 564
           +RRY  SRDD QL+       H  N   P    +  L +APCGAIANSLF+DSF +++ +
Sbjct: 121 NRRYGVSRDDAQLSGLASALRHPANECAPYQFRSDGLPIAPCGAIANSLFNDSFSLWHQR 180

Query: 565 NK-----EVPVLRTGIAWPSDKAVKFHNPP--GPDLKEAFKNFAKPTDWKKNIWELDPEN 617
                  EVP+ RT IAW +D  VKF NPP     L  AF+  A P +W + ++EL P+ 
Sbjct: 181 QPSDPFVEVPLDRTAIAWWTDYHVKFRNPPLVNGSLALAFRGTAPPPNWHRPVYELSPD- 239

Query: 618 PDNNGFQNEDFIVWMRTAALPNFRKLYRRVNHEVEGYKSGLP 659
           P+N GF N+DF+VWMRTAALP FRKLY R+      Y +GLP
Sbjct: 240 PNNTGFINQDFVVWMRTAALPTFRKLYARIRQ--GNYSAGLP 279

Mus musculus (taxid: 10090)

>sp|Q5F362|CC50A_CHICK Cell cycle control protein 50A OS=Gallus gallus GN=TMEM30A PE=2 SV=1

 Score =  226 bits (576), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 134/258 (51%), Positives = 172/258 (66%), Gaps = 18/258 (6%)

Query: 402 KPKESAFNQQKLPAWQPILTAGTVMPAFFTFGLFFIPIGVGLVYFADNVKELSLDYTHCL 461
           KP  +AF QQ+LPAWQPILTAGTV+PAFF  GL FIPIG+G+   ++N++E  +DYT   
Sbjct: 36  KPDNTAFKQQRLPAWQPILTAGTVLPAFFIIGLIFIPIGIGIFVTSNNIREYEIDYTGV- 94

Query: 462 SVEQPDKTCAQIINNSRQMN--CTCELQFALSEEIEGNVYIYYGLTNFYQNHRRYVKSRD 519
              +P   C + +N S      CTC + F L    E NV++YYGL+NFYQNHRRYVKSRD
Sbjct: 95  ---EPSSPCNKCLNVSWDSTPPCTCTINFTLEHSFESNVFMYYGLSNFYQNHRRYVKSRD 151

Query: 520 DLQLTATHSFNLLQPCT-LAMYLS-----VAPCGAIANSLFSDSFKIF---NDKNKEVPV 570
           D QL   +S +LL P      Y +     +APCGAIANS+F+D+ +++   ND    + +
Sbjct: 152 DSQLNGDNS-SLLNPSKECEPYRTNEDKPIAPCGAIANSMFNDTLELYHIENDTRTAITL 210

Query: 571 LRTGIAWPSDKAVKFHNPPGP-DLKEAFKNFAKPTDWKKNIWELDPENPDNNGFQNEDFI 629
           ++ GIAW +DK VKF NP G  +L   F+   KP +W K ++ LD E PDNNGF NEDFI
Sbjct: 211 IKKGIAWWTDKNVKFRNPKGDGNLTALFQGTTKPVNWPKPVYMLDSE-PDNNGFINEDFI 269

Query: 630 VWMRTAALPNFRKLYRRV 647
           VWMRTAALP FRKLYR +
Sbjct: 270 VWMRTAALPTFRKLYRLI 287

Gallus gallus (taxid: 9031)

>sp|Q5R6C0|CC50A_PONAB Cell cycle control protein 50A OS=Pongo abelii GN=TMEM30A PE=2 SV=1

 Score =  224 bits (572), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 136/271 (50%), Positives = 177/271 (65%), Gaps = 17/271 (6%)

Query: 402 KPKESAFNQQKLPAWQPILTAGTVMPAFFTFGLFFIPIGVGLVYFADNVKELSLDYTHCL 461
           +P  +AF QQ+LPAWQPILTAGTV+P FF  GL FIPIG+G+   ++N++E+ +DYT   
Sbjct: 27  RPDNTAFKQQRLPAWQPILTAGTVLPIFFIIGLIFIPIGIGIFVTSNNIREIEIDYTGT- 85

Query: 462 SVEQPDKTCAQIINNSRQMNCTCELQFALSEEIEGNVYIYYGLTNFYQNHRRYVKSRDDL 521
              +P   C + + +     C C + F L +  EGNV++YYGL+NFYQNHRRYVKSRDD 
Sbjct: 86  ---EPSSPCNKCL-SPDVTPCICTINFTLEKSFEGNVFMYYGLSNFYQNHRRYVKSRDDS 141

Query: 522 QLTATHSFNL-----LQPCTLAMYLSVAPCGAIANSLFSDSFKIFNDKNKEVPV----LR 572
           QL    S  L      +P        +APCGAIANS+F+D+ ++F   N   P+     +
Sbjct: 142 QLNGDSSALLNPSKECEPYRRNEDKPIAPCGAIANSMFNDTLELFLIGNDSYPIPIALKK 201

Query: 573 TGIAWPSDKAVKFHNPPGPD-LKEAFKNFAKPTDWKKNIWELDPENPDNNGFQNEDFIVW 631
            GIAW +DK VKF NPPG D LKE FK   KP +W K ++ LD  +PDNNGF NEDFIVW
Sbjct: 202 KGIAWWTDKNVKFRNPPGGDNLKERFKGTTKPVNWLKPVYMLD-SDPDNNGFINEDFIVW 260

Query: 632 MRTAALPNFRKLYRRVNHEVEGYKSGLPAVK 662
           MRTAALP FRKLYR +  + + + + LPA +
Sbjct: 261 MRTAALPTFRKLYRLIERKSDLHPT-LPAGR 290

Pongo abelii (taxid: 9601)

>sp|Q9NV96|CC50A_HUMAN Cell cycle control protein 50A OS=Homo sapiens GN=TMEM30A PE=1 SV=1

 Score =  222 bits (566), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 135/271 (49%), Positives = 177/271 (65%), Gaps = 17/271 (6%)

Query: 402 KPKESAFNQQKLPAWQPILTAGTVMPAFFTFGLFFIPIGVGLVYFADNVKELSLDYTHCL 461
           +P  +AF QQ+LPAWQPILTAGTV+P FF  GL FIPIG+G+   ++N++E+ +DYT   
Sbjct: 27  RPDNTAFKQQRLPAWQPILTAGTVLPIFFIIGLIFIPIGIGIFVTSNNIREIEIDYTGT- 85

Query: 462 SVEQPDKTCAQIINNSRQMNCTCELQFALSEEIEGNVYIYYGLTNFYQNHRRYVKSRDDL 521
              +P   C + + +     C C + F L +  EGNV++YYGL+NFYQNHRRYVKSRDD 
Sbjct: 86  ---EPSSPCNKCL-SPDVTPCFCTINFTLEKSFEGNVFMYYGLSNFYQNHRRYVKSRDDS 141

Query: 522 QLTATHSFNL-----LQPCTLAMYLSVAPCGAIANSLFSDSFKIFNDKNKEVPV----LR 572
           QL    S  L      +P        +APCGAIANS+F+D+ ++F   N   P+     +
Sbjct: 142 QLNGDSSALLNPSKECEPYRRNEDKPIAPCGAIANSMFNDTLELFLIGNDSYPIPIALKK 201

Query: 573 TGIAWPSDKAVKFHNPPGPD-LKEAFKNFAKPTDWKKNIWELDPENPDNNGFQNEDFIVW 631
            GIAW +DK VKF NPPG D L+E FK   KP +W K ++ LD  +PDNNGF NEDFIVW
Sbjct: 202 KGIAWWTDKNVKFRNPPGGDNLEERFKGTTKPVNWLKPVYMLD-SDPDNNGFINEDFIVW 260

Query: 632 MRTAALPNFRKLYRRVNHEVEGYKSGLPAVK 662
           MRTAALP FRKLYR +  + + + + LPA +
Sbjct: 261 MRTAALPTFRKLYRLIERKSDLHPT-LPAGR 290

Homo sapiens (taxid: 9606)

>sp|Q2T9P5|CC50C_BOVIN Cell cycle control protein 50C OS=Bos taurus GN=TMEM30C PE=2 SV=1

 Score =  214 bits (546), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 115/268 (42%), Positives = 166/268 (61%), Gaps = 18/268 (6%)

Query: 403 PKESAFNQQKLPAWQPILTAGTVMPAFFTFGLFFIPIGVGLVYFADNVKELSLDYTHCLS 462
           P  +A  QQ+LPA++  LTA  ++  FF  GLF + +G+ L+  A ++KE+ ++YT    
Sbjct: 13  PDNTAVKQQQLPAFRLQLTASEILSGFFAIGLFCLGMGIILLLSAKSIKEVEINYT---- 68

Query: 463 VEQPDKTCAQIINNSRQMN--CTCELQFALSEEIEGNVYIYYGLTNFYQNHRRYVKSRDD 520
             +   TCA++   +   +  C C + F L +++EGNVY+YY L  FYQN  RY+ SR +
Sbjct: 69  --EKCATCAKLREEATNFDKECNCSISFYLPQKMEGNVYLYYKLYGFYQNLYRYILSRSN 126

Query: 521 LQLTATHSFNLLQPC----TLAMYLSVAPCGAIANSLFSDSFKIFNDKNK----EVPVLR 572
           +QL      ++ + C    T    L +APCGAIANS+F+D+  ++ + N      VP++R
Sbjct: 127 IQLVGADVKDV-RNCAPFRTSDNGLPIAPCGAIANSMFNDTIVLWYNFNSSTHIRVPMVR 185

Query: 573 TGIAWPSDKAVKFHNPPGPDLKEAFKNFAKPTDWKKNIWELDPENPDNNGFQNEDFIVWM 632
           T  AW +DK VKF NP   +L  AF   AKP +W K ++ELD  +P NNGF N+DFIVWM
Sbjct: 186 TETAWWTDKYVKFQNPAFQNLSSAFAGTAKPPNWPKPVYELDENDPGNNGFINDDFIVWM 245

Query: 633 RTAALPNFRKLYRRVNHEVEGYKSGLPA 660
           RTAA PNF+KLYRR+ H +  +  GLPA
Sbjct: 246 RTAAFPNFKKLYRRL-HRIGNFTEGLPA 272

Bos taurus (taxid: 9913)

>sp|Q6AY41|CC50A_RAT Cell cycle control protein 50A OS=Rattus norvegicus GN=Tmem30a PE=2 SV=1

 Score =  203 bits (517), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 130/271 (47%), Positives = 162/271 (59%), Gaps = 54/271 (19%)

Query: 402 KPKESAFNQQKLPAWQPILTAGTVMPAFFTFGLFFIPIGVGLVYFADNVKELSLDYTHCL 461
           +P  +AF QQ+LPAWQPILTAGTV+P FF  GL FIPIG+G+   ++N++E         
Sbjct: 27  RPDNTAFKQQRLPAWQPILTAGTVLPTFFIIGLIFIPIGIGIFVTSNNIRE--------- 77

Query: 462 SVEQPDKTCAQIINNSRQMNCTCELQFALSEEIEGNVYIYYGLTNFYQNHRRYVKSRDDL 521
                                           IEGNV++YYGL+NFYQNHRRYVKSRDD 
Sbjct: 78  --------------------------------IEGNVFMYYGLSNFYQNHRRYVKSRDDS 105

Query: 522 QLTATHSFNL-----LQPCTLAMYLSVAPCGAIANSLFSDSFKIFNDKN----KEVPVL- 571
           QL    S  L      +P        +APCGAIANS+F+D+ ++F   N    K VP+L 
Sbjct: 106 QLNGDPSALLNPSKECEPYRRNEDKPIAPCGAIANSMFNDTLELFLVANESDPKPVPILL 165

Query: 572 -RTGIAWPSDKAVKFHNPPGPD-LKEAFKNFAKPTDWKKNIWELDPENPDNNGFQNEDFI 629
            + GIAW +DK VKF NPPG D L+E FK+  KP +W K ++ELDP++  NNGF NEDFI
Sbjct: 166 KKKGIAWWTDKNVKFRNPPGKDSLQEKFKDTTKPVNWHKPVYELDPDDESNNGFINEDFI 225

Query: 630 VWMRTAALPNFRKLYRRVNHEVEGYKSGLPA 660
           VWMRTAALP FRKLYR +    +     LPA
Sbjct: 226 VWMRTAALPTFRKLYRLI-ERTDDLHPTLPA 255

Rattus norvegicus (taxid: 10116)

>sp|Q9D4D7|CC50C_MOUSE Cell cycle control protein 50C OS=Mus musculus GN=Tmem30c PE=2 SV=2

 Score =  201 bits (512), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 111/267 (41%), Positives = 157/267 (58%), Gaps = 16/267 (5%)

Query: 403 PKESAFNQQKLPAWQPILTAGTVMPAFFTFGLFFIPIGVGLVYFADNVKELSLDYTHCLS 462
           P+ +A  QQ LP  Q  L+A  V+  FF  G F + IG+ L+  A + K++ ++YT   +
Sbjct: 13  PENTALKQQTLPTQQLNLSASVVLSIFFITGGFCLSIGIILLLSAKSTKKIEINYTKTCA 72

Query: 463 VEQPDKTCAQIINNSRQMN--CTCELQFALSEEIEGNVYIYYGLTNFYQNHRRYVKSRDD 520
                  CAQ+  NS   +  C C L F L E++EG+VY+YY L  FYQN  +Y+ SR +
Sbjct: 73  ------NCAQLRENSSNFDKACNCSLPFYLPEKMEGDVYMYYKLYGFYQNLYQYILSRSN 126

Query: 521 LQLTATHSFNLLQ--PCTLAMYLS-VAPCGAIANSLFSDSFKIFNDKNK----EVPVLRT 573
            QL     ++     P  ++   + + PCGAIANS+F+D+  +  + N     EVP+L++
Sbjct: 127 SQLVGKDIWDTTNCDPFQVSHNDTPIIPCGAIANSIFNDTITLSYNLNSSTQIEVPMLKS 186

Query: 574 GIAWPSDKAVKFHNPPGPDLKEAFKNFAKPTDWKKNIWELDPENPDNNGFQNEDFIVWMR 633
           G+ W +DK VKF NP   +    F   +KP  W K I+ELD ++P NNGF NEDFIVWMR
Sbjct: 187 GLTWWTDKYVKFRNPRSSNFTSTFAGSSKPLHWAKPIYELDLDDPGNNGFLNEDFIVWMR 246

Query: 634 TAALPNFRKLYRRVNHEVEGYKSGLPA 660
           TAA P F+KLYRR+   V  +  GLPA
Sbjct: 247 TAAFPTFKKLYRRL-KRVHAFAEGLPA 272

Mus musculus (taxid: 10090)

>sp|Q95JK4|CC50C_MACFA Cell cycle control protein 50C OS=Macaca fascicularis GN=TMEM30C PE=2 SV=1

 Score =  199 bits (507), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 108/267 (40%), Positives = 159/267 (59%), Gaps = 18/267 (6%)

Query: 403 PKESAFNQQKLPAWQPILTAGTVMPAFFTFGLFFIPIGVGLVYFADNVKELSLDYTHCLS 462
           P  SA  QQ+LPA +   TA  V+  FFT G+F + +G+ L+  A + +E+ ++YT   +
Sbjct: 13  PDNSALKQQELPAHRLYFTARRVLFVFFTTGIFCLCMGIILILSARSTQEIEINYTRICA 72

Query: 463 VEQPDKTCAQIINNSRQMN--CTCELQFALSEEIEGNVYIYYGLTNFYQNHRRYVKSRDD 520
                  CA++  N+   +  CTC + F LS ++ GNVY+YY L  FYQN  RYV+SR +
Sbjct: 73  ------NCAKLRENASNFDKECTCSIPFYLSGKMMGNVYMYYKLYGFYQNLYRYVRSRSN 126

Query: 521 LQLTATHSFNLLQPCTLAMY---LSVAPCGAIANSLFSDSFKIFNDKNK----EVPVLRT 573
            QL       +       M      + PCGAIANS+F+D+  + ++ N     +VP+L++
Sbjct: 127 RQLVGKDVKAVEDCAPFKMSDNKTPIVPCGAIANSMFNDTIILSHNINSSVQIKVPMLKS 186

Query: 574 GIAWPSDKAVKFHNPPGPDLKEAFKNFAKPTDWKKNIWELDPENPDNNGFQNEDFIVWMR 633
           G+ W +DK VKF NP   +L + F+   KP +W K I++LD ++P NNGF N+DFIVWMR
Sbjct: 187 GLTWWTDKYVKFQNPSSKNLADEFRGTTKPPNWPKPIYDLDKKDPRNNGFLNDDFIVWMR 246

Query: 634 TAALPNFRKLYRRVN---HEVEGYKSG 657
            AA P F+KLY R+N   H +EG  +G
Sbjct: 247 AAAFPTFKKLYGRLNRTHHFIEGLPAG 273

Macaca fascicularis (taxid: 9541)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	667
332025611	365	Cell cycle control protein 50A [Acromyrm	0.398	0.728	0.580	1e-87
170069453	357	conserved hypothetical protein [Culex qu	0.404	0.756	0.541	2e-86
307207738	349	Cell cycle control protein 50A [Harpegna	0.385	0.736	0.595	7e-86
321463437	362	hypothetical protein DAPPUDRAFT_215020 [	0.380	0.701	0.575	3e-85
157167459	357	hypothetical protein AaeL_AAEL002163 [Ae	0.403	0.753	0.532	5e-85
380027741	361	PREDICTED: cell cycle control protein 50	0.385	0.711	0.594	6e-85
350404550	361	PREDICTED: cell cycle control protein 50	0.385	0.711	0.598	6e-85
340716513	361	PREDICTED: cell cycle control protein 50	0.385	0.711	0.594	7e-85
91090770	364	PREDICTED: similar to conserved hypothet	0.383	0.703	0.577	7e-85
66544564	361	PREDICTED: cell cycle control protein 50	0.385	0.711	0.602	2e-84

>gi|332025611|gb|EGI65773.1| Cell cycle control protein 50A [Acromyrmex echinatior]

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 165/284 (58%), Positives = 203/284 (71%), Gaps = 18/284 (6%)

Query: 388 EPDIVLNSNQKQNYKPKESAFNQQKLPAWQPILTAGTVMPAFFTFGLFFIPIGVGLVYFA 447
           E D V N ++K    P +SAF QQ+LPAWQPILTAGTV+P FF  G+ FIP+G+GL+YF+
Sbjct: 6   EVDAVPNKSKK----PSDSAFKQQRLPAWQPILTAGTVLPTFFVIGVAFIPVGIGLLYFS 61

Query: 448 DNVKELSLDYTHCLS--VEQPD---KTCAQIINNSRQMNCTCELQFALSEEIEGNVYIYY 502
           D VKE  +DYT+C S  + + D   K CA +I      +CTCE+ F L+ E  G VY+YY
Sbjct: 62  DEVKEHIIDYTNCNSTNITRDDGLPKKCADVIAECNNCSCTCEINFELTSEFAGKVYMYY 121

Query: 503 GLTNFYQNHRRYVKSRDDLQLTATHSFNLLQPCTLAMY-------LSVAPCGAIANSLFS 555
           GLTNFYQNHRRYVKSRDD QL       +   C    Y        ++APCGAIANSLFS
Sbjct: 122 GLTNFYQNHRRYVKSRDDNQLLGQLHEIVSSDCEPFAYDKINDKDTAIAPCGAIANSLFS 181

Query: 556 DSFKIFNDKNK-EVPVLRTGIAWPSDKAVKFHNPPGPDLKEAFKNFAKPTDWKKNIWELD 614
           D   +++ K+  +VP+LRTGIAWPSDK +KF NP G +LKE FKNFAKP +W K+IW+LD
Sbjct: 182 DELTLYSAKHGGQVPLLRTGIAWPSDKNIKFRNPEG-NLKEVFKNFAKPKNWTKHIWDLD 240

Query: 615 PENPDNNGFQNEDFIVWMRTAALPNFRKLYRRVNHEVEGYKSGL 658
           P N +NNGFQNED IVWMRTAALP FRKLYRR++H  +G+KSGL
Sbjct: 241 PINEENNGFQNEDLIVWMRTAALPTFRKLYRRIDHSQDGFKSGL 284

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170069453|ref|XP_001869231.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167865385|gb|EDS28768.1| conserved hypothetical protein [Culex quinquefasciatus]

 Score =  326 bits (836), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 150/277 (54%), Positives = 199/277 (71%), Gaps = 7/277 (2%)

Query: 389 PDIVLNSNQKQNYKPKESAFNQQKLPAWQPILTAGTVMPAFFTFGLFFIPIGVGLVYFAD 448
           P+ V   +  ++ +P +SAF QQ+LPAWQP+LTAGTV+PAFF  G+ FIP+GV L+YF++
Sbjct: 2   PETVDGGDIPKSKRPSDSAFKQQRLPAWQPVLTAGTVLPAFFVIGIAFIPVGVALLYFSN 61

Query: 449 NVKELSLDYTHCLSVEQPDKTCAQIINNSRQMNCTCELQFALSEEIEGNVYIYYGLTNFY 508
            + E   DYT CL V   + TCA++++      CTC + F L ++  G VY+YYGLTN+Y
Sbjct: 62  AITEFVYDYTKCLQVGSQNLTCAEVLSAKEAEECTCIVNFTLEKDFVGKVYMYYGLTNYY 121

Query: 509 QNHRRYVKSRDDLQLTATHSFNLLQPCTLAMYLS------VAPCGAIANSLFSDSFKIFN 562
           QNHRRYVKSRDD QL    S      C    Y        +APCGAIANSLFSD+F++ +
Sbjct: 122 QNHRRYVKSRDDDQLLGRLSRTPSSDCAPFAYADENQLHPIAPCGAIANSLFSDTFELTS 181

Query: 563 DKNKEVPVLRTGIAWPSDKAVKFHNPPGPDLKEAFKNFAKPTDWKKNIWELDPENPDNNG 622
            +   VP+LRT IAWPSD+ +KF NP G DL+EA K+F++P DW+K +WELD +N DNNG
Sbjct: 182 HERGTVPLLRTEIAWPSDRKIKFRNPEG-DLREALKDFSRPRDWRKELWELDLDNKDNNG 240

Query: 623 FQNEDFIVWMRTAALPNFRKLYRRVNHEVEGYKSGLP 659
           FQNED IVWMRTAALP+FRKL+RR++HE + +++GLP
Sbjct: 241 FQNEDLIVWMRTAALPSFRKLHRRIDHEHQKFETGLP 277

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307207738|gb|EFN85356.1| Cell cycle control protein 50A [Harpegnathos saltator]

 Score =  325 bits (832), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 162/272 (59%), Positives = 191/272 (70%), Gaps = 15/272 (5%)

Query: 402 KPKESAFNQQKLPAWQPILTAGTVMPAFFTFGLFFIPIGVGLVYFADNVKELSLDYTHCL 461
           KP +SAF QQ+LPAWQPILTAGTV+P FF  G+ FIP+G+GL+YF+D VKE  +DYT+C 
Sbjct: 15  KPSDSAFKQQRLPAWQPILTAGTVLPTFFVIGVAFIPVGIGLLYFSDEVKEHIIDYTNCN 74

Query: 462 SVE------QPDKTCAQIINNSRQMNCTCELQFALSEEIEGNVYIYYGLTNFYQNHRRYV 515
           S+       QP K CA +I      +C CE  F L  +  G VY+YYGLTNFYQNHRRYV
Sbjct: 75  SINLTTSDGQPRK-CADVIAEDPSKDCFCEKNFTLPVDFRGKVYMYYGLTNFYQNHRRYV 133

Query: 516 KSRDDLQLTATHSFNLLQPCTLAMY-----LSVAPCGAIANSLFSDSFKIFNDK--NKEV 568
           KSRDD QL    +  +   C    Y       +APCGAIANSLFSD   + + +  NK V
Sbjct: 134 KSRDDNQLLGDLTLIVSSDCEPFAYEETNRTPIAPCGAIANSLFSDKLTLLSARHDNKNV 193

Query: 569 PVLRTGIAWPSDKAVKFHNPPGPDLKEAFKNFAKPTDWKKNIWELDPENPDNNGFQNEDF 628
           P+L TGIAWPSDK +KF NP G DLK AFK+FAKP +W K+IWELDP+N DNNGFQNED 
Sbjct: 194 PLLNTGIAWPSDKNIKFRNPKG-DLKIAFKDFAKPKNWSKHIWELDPDNNDNNGFQNEDL 252

Query: 629 IVWMRTAALPNFRKLYRRVNHEVEGYKSGLPA 660
           IVWMRTAALP FRKLYRRV+H   G+  GL A
Sbjct: 253 IVWMRTAALPTFRKLYRRVDHTQNGFTEGLVA 284

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321463437|gb|EFX74453.1| hypothetical protein DAPPUDRAFT_215020 [Daphnia pulex]

 Score =  322 bits (826), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 157/273 (57%), Positives = 187/273 (68%), Gaps = 19/273 (6%)

Query: 402 KPKESAFNQQKLPAWQPILTAGTVMPAFFTFGLFFIPIGVGLVYFADNVKELSLDYTHCL 461
           KP  SAF QQ+LPAWQPILTAGTV+P FF  G+ FIPIG+GL++F++NVKE   DYT C+
Sbjct: 16  KPSNSAFKQQRLPAWQPILTAGTVLPTFFIIGVAFIPIGIGLLHFSNNVKEFVYDYTDCI 75

Query: 462 SVEQPDKTCAQIINNSRQMNCTCELQFALSEEIEGNVYIYYGLTNFYQNHRRYVKSRDDL 521
           S E P  +CA I+  +    CTC L   L++  EG+VYIYYGL+NFYQNHRRYVKSRDD 
Sbjct: 76  SQEDPSLSCANILEMNITKACTCVLPVNLTDIFEGDVYIYYGLSNFYQNHRRYVKSRDDH 135

Query: 522 QLTATHSFNLLQPCT-----LAMY---------LSVAPCGAIANSLFSDSFKIFNDKNKE 567
           QL  T     L P +      A Y           V PCGAIANS+F+D+  +  +    
Sbjct: 136 QLLGT-----LGPVSNECDPFARYPDPNNPSNTKQVVPCGAIANSIFNDTLTLKREDGNP 190

Query: 568 VPVLRTGIAWPSDKAVKFHNPPGPDLKEAFKNFAKPTDWKKNIWELDPENPDNNGFQNED 627
           VPVL TGIAWPSDK +KF NPP       +K++ KP +W+KNIWELDP NP+NNG QNED
Sbjct: 191 VPVLNTGIAWPSDKQMKFRNPPNSQTNLIYKDYVKPQNWRKNIWELDPTNPENNGLQNED 250

Query: 628 FIVWMRTAALPNFRKLYRRVNHEVEGYKSGLPA 660
            IVWMRTAALP FRKLYRR+N   EGY SGL A
Sbjct: 251 LIVWMRTAALPTFRKLYRRLNRTAEGYNSGLKA 283

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157167459|ref|XP_001654806.1| hypothetical protein AaeL_AAEL002163 [Aedes aegypti] gi|108882431|gb|EAT46656.1| AAEL002163-PA [Aedes aegypti]

 Score =  322 bits (824), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 147/276 (53%), Positives = 198/276 (71%), Gaps = 7/276 (2%)

Query: 389 PDIVLNSNQKQNYKPKESAFNQQKLPAWQPILTAGTVMPAFFTFGLFFIPIGVGLVYFAD 448
           PD V   +  ++ +P +SAF QQ+LPAWQP+LTAGTV+PAFF  G+ FIP+GV L+YF++
Sbjct: 2   PDTVDGGDIPKSKRPSDSAFKQQRLPAWQPVLTAGTVLPAFFVIGIAFIPVGVALLYFSN 61

Query: 449 NVKELSLDYTHCLSVEQPDKTCAQIINNSRQMNCTCELQFALSEEIEGNVYIYYGLTNFY 508
            + E   DYT C+     ++TC+++++      C C + F L ++  G VY+YYGLTN+Y
Sbjct: 62  AITEFVYDYTKCVQYGSLNRTCSEVLSAKEADECECVVNFTLEKDFLGKVYMYYGLTNYY 121

Query: 509 QNHRRYVKSRDDLQLTATHSFNLLQPCTLAMYLS------VAPCGAIANSLFSDSFKIFN 562
           QNHRRYVKSRDD QL    S      C    Y+       VAPCGAIANSLFSD+F++ +
Sbjct: 122 QNHRRYVKSRDDDQLLGRLSMTPSSDCAPFAYVDDDPSRPVAPCGAIANSLFSDTFELTS 181

Query: 563 DKNKEVPVLRTGIAWPSDKAVKFHNPPGPDLKEAFKNFAKPTDWKKNIWELDPENPDNNG 622
           +K   VP+LRT IAWPSD+ +KF NP G DL+EA K F++P DW+ ++W LDP+NPDNNG
Sbjct: 182 EKYGPVPLLRTEIAWPSDRKIKFRNPEG-DLQEALKGFSRPRDWRTDLWNLDPQNPDNNG 240

Query: 623 FQNEDFIVWMRTAALPNFRKLYRRVNHEVEGYKSGL 658
           FQNED IVWMRTAALP+FRKL+RR++H  + +++GL
Sbjct: 241 FQNEDLIVWMRTAALPSFRKLHRRIDHNKKYFENGL 276

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380027741|ref|XP_003697577.1| PREDICTED: cell cycle control protein 50A-like [Apis florea]

 Score =  322 bits (824), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 160/269 (59%), Positives = 190/269 (70%), Gaps = 12/269 (4%)

Query: 402 KPKESAFNQQKLPAWQPILTAGTVMPAFFTFGLFFIPIGVGLVYFADNVKELSLDYTHCL 461
           KP +SAF QQ+LPAWQPILTAGT++P FF  G+ FIP+GVGL+YF+D VKE  LDYT C 
Sbjct: 15  KPSDSAFKQQRLPAWQPILTAGTILPTFFVIGIAFIPVGVGLLYFSDQVKEYILDYTDCY 74

Query: 462 SVEQ------PDKTCAQIINNSRQMNCTCELQFALSEEIEGNVYIYYGLTNFYQNHRRYV 515
           S         P K CA +I  +R   C CEL F L ++  G +Y+YYGLTNFYQNHRRYV
Sbjct: 75  SANINHTKGIPVK-CADVIAENRSNFCRCELNFTLPDDFNGKIYMYYGLTNFYQNHRRYV 133

Query: 516 KSRDDLQLTATHSFNLLQPCTLAMY---LSVAPCGAIANSLFSDSFKIFN-DKNKEVPVL 571
           KSRDD QL    S  +   C    Y    ++ PCGAIANSLFSD  ++++   N  VP+L
Sbjct: 134 KSRDDNQLLGKLSEVVSGDCEPFAYDEGKAIVPCGAIANSLFSDELELYSVSHNTNVPLL 193

Query: 572 RTGIAWPSDKAVKFHNPPGPDLKEAFKNFAKPTDWKKNIWELDPENPDNNGFQNEDFIVW 631
            TGIAWPSDK +KF NP G DLK+AF+ FAKP +W K+I+ELD +N DNNGFQNED IVW
Sbjct: 194 ETGIAWPSDKNIKFKNPEG-DLKKAFEKFAKPKNWSKHIFELDKKNEDNNGFQNEDLIVW 252

Query: 632 MRTAALPNFRKLYRRVNHEVEGYKSGLPA 660
           MRTAALP FRKLYRRVNH   G+  GL A
Sbjct: 253 MRTAALPTFRKLYRRVNHTESGFAGGLAA 281

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350404550|ref|XP_003487141.1| PREDICTED: cell cycle control protein 50A-like [Bombus impatiens]

 Score =  322 bits (824), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 161/269 (59%), Positives = 190/269 (70%), Gaps = 12/269 (4%)

Query: 402 KPKESAFNQQKLPAWQPILTAGTVMPAFFTFGLFFIPIGVGLVYFADNVKELSLDYTHCL 461
           KP +SAF QQ+LPAWQPILTAGTV+P FF  G+ FIP+GVGL+YF+D VKE  LDYT C 
Sbjct: 15  KPSDSAFKQQRLPAWQPILTAGTVLPTFFVIGIAFIPVGVGLLYFSDQVKEYILDYTDCN 74

Query: 462 SVE------QPDKTCAQIINNSRQMNCTCELQFALSEEIEGNVYIYYGLTNFYQNHRRYV 515
           S         P K CA II       C C++ F+L  +  G +Y+YYGLTNFYQNHRRYV
Sbjct: 75  STNIFRAKGMPVK-CADIIAEGHSQPCYCKINFSLPSDFNGKIYMYYGLTNFYQNHRRYV 133

Query: 516 KSRDDLQLTATHSFNLLQPCTLAMYLS---VAPCGAIANSLFSDSFKIFNDKNKE-VPVL 571
           KSRDD QL    S ++   C    Y+    + PCGAIANSLFSD   +F+ K+K  VP+L
Sbjct: 134 KSRDDNQLLGKLSPDVSGDCEPFAYVGETPIVPCGAIANSLFSDDLTLFSLKHKAPVPLL 193

Query: 572 RTGIAWPSDKAVKFHNPPGPDLKEAFKNFAKPTDWKKNIWELDPENPDNNGFQNEDFIVW 631
           +TGIAWPSDK +KF NP G +L+E FKNF KP +W K I+ELD EN  NNGFQNED IVW
Sbjct: 194 KTGIAWPSDKNIKFRNPEG-NLREVFKNFTKPKNWDKYIYELDNENESNNGFQNEDLIVW 252

Query: 632 MRTAALPNFRKLYRRVNHEVEGYKSGLPA 660
           MRTAALP FRKLYRRVNH V+G+  GL A
Sbjct: 253 MRTAALPTFRKLYRRVNHTVDGFTEGLVA 281

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340716513|ref|XP_003396742.1| PREDICTED: cell cycle control protein 50A-like [Bombus terrestris]

 Score =  321 bits (823), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 160/269 (59%), Positives = 189/269 (70%), Gaps = 12/269 (4%)

Query: 402 KPKESAFNQQKLPAWQPILTAGTVMPAFFTFGLFFIPIGVGLVYFADNVKELSLDYTHCL 461
           KP +SAF QQ+LPAWQPILTAGTV+P FF  G+ FIP+GVGL+YF+D VKE  LDYT C 
Sbjct: 15  KPSDSAFKQQRLPAWQPILTAGTVLPTFFVIGIAFIPVGVGLLYFSDQVKEYILDYTDCN 74

Query: 462 SVE------QPDKTCAQIINNSRQMNCTCELQFALSEEIEGNVYIYYGLTNFYQNHRRYV 515
           S         P K CA I+       C C++ F L  +  G +Y+YYGLTNFYQNHRRYV
Sbjct: 75  STNIFRAKGMPAK-CADILAEGHSQPCYCKINFTLPSDFNGKIYMYYGLTNFYQNHRRYV 133

Query: 516 KSRDDLQLTATHSFNLLQPCTLAMYLS---VAPCGAIANSLFSDSFKIFNDKNKE-VPVL 571
           KSRDD QL    S ++   C    Y+    + PCGAIANSLFSD   +F+ K+K  VP+L
Sbjct: 134 KSRDDNQLLGKLSPDVSGDCEPFAYIGETPIVPCGAIANSLFSDDLTLFSLKHKAPVPLL 193

Query: 572 RTGIAWPSDKAVKFHNPPGPDLKEAFKNFAKPTDWKKNIWELDPENPDNNGFQNEDFIVW 631
           +TGIAWPSDK +KF NP G +L+E FKNF KP +W K I+ELD EN  NNGFQNED IVW
Sbjct: 194 KTGIAWPSDKNIKFRNPEG-NLREVFKNFTKPKNWDKYIYELDNENESNNGFQNEDLIVW 252

Query: 632 MRTAALPNFRKLYRRVNHEVEGYKSGLPA 660
           MRTAALP FRKLYRRVNH V+G+  GL A
Sbjct: 253 MRTAALPTFRKLYRRVNHTVDGFTEGLVA 281

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91090770|ref|XP_969427.1| PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum] gi|270013968|gb|EFA10416.1| hypothetical protein TcasGA2_TC012656 [Tribolium castaneum]

 Score =  321 bits (823), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 157/272 (57%), Positives = 193/272 (70%), Gaps = 16/272 (5%)

Query: 402 KPKESAFNQQKLPAWQPILTAGTVMPAFFTFGLFFIPIGVGLVYFADNVKELSLDYTHCL 461
           KP +SAF QQ+LPAWQPILTAGTV+P FF  G+ FIP+G+GL+YF+D VKEL +DYT+C 
Sbjct: 13  KPSDSAFKQQRLPAWQPILTAGTVLPTFFVIGIAFIPVGIGLLYFSDEVKELVIDYTNCN 72

Query: 462 SVEQPD---------KTCAQIINNSRQMNCTCELQFALSEEIEGNVYIYYGLTNFYQNHR 512
              +           K C+ +I++    NCTC + F L  + +G VY+YYGL+NFYQNHR
Sbjct: 73  QTLESSPNGNFTDTGKRCSDVISDDANANCTCIIPFTLDSDFKGKVYMYYGLSNFYQNHR 132

Query: 513 RYVKSRDDLQLTATHSFNLLQPCTLAMYLS---VAPCGAIANSLFSDSF---KIFNDKNK 566
           RYVKSRDD QL           C+    +    +APCGAIANSLFSD     K+  +  K
Sbjct: 133 RYVKSRDDNQLLGRLDPVPSSDCSPFDKIKDTPIAPCGAIANSLFSDVLTLKKLEGNTWK 192

Query: 567 EVPVLRTGIAWPSDKAVKFHNPPGPDLKEAFKNFAKPTDWKKNIWELDPENPDNNGFQNE 626
           +V ++R GIAW SDK +KF NPPG DLKEAFKNFAKP  WKKN+WELD E+P+NNGFQNE
Sbjct: 193 DVDLIRKGIAWDSDKNIKFRNPPG-DLKEAFKNFAKPKAWKKNVWELDLEDPENNGFQNE 251

Query: 627 DFIVWMRTAALPNFRKLYRRVNHEVEGYKSGL 658
           D IVWMRTAALP FRKLYR+++H  +GYK GL
Sbjct: 252 DLIVWMRTAALPTFRKLYRKIDHSQDGYKDGL 283

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|66544564|ref|XP_395044.2| PREDICTED: cell cycle control protein 50A-like isoform 1 [Apis mellifera]

 Score =  319 bits (818), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 162/269 (60%), Positives = 189/269 (70%), Gaps = 12/269 (4%)

Query: 402 KPKESAFNQQKLPAWQPILTAGTVMPAFFTFGLFFIPIGVGLVYFADNVKELSLDYTHCL 461
           KP +SAF QQ+LPAWQPILTAGTV+P FF  G+ FIP+GVGL+YF+D VKE  LDYT C 
Sbjct: 15  KPSDSAFKQQRLPAWQPILTAGTVLPTFFVIGIAFIPVGVGLLYFSDQVKEYILDYTDCN 74

Query: 462 SVE------QPDKTCAQIINNSRQMNCTCELQFALSEEIEGNVYIYYGLTNFYQNHRRYV 515
           S         P K CA +I  +R   C CEL F L  +  G  Y+YYGLTNFYQNHRRYV
Sbjct: 75  STNINHTKGMPVK-CADVIAENRSNICNCELNFTLPSDFNGKTYMYYGLTNFYQNHRRYV 133

Query: 516 KSRDDLQLTATHSFNLLQPCTLAMY---LSVAPCGAIANSLFSDSFKIFNDKNK-EVPVL 571
           KSRDD QL    S  +   C    Y    ++ PCGAIANSLFSD  K+++  +K  VP+L
Sbjct: 134 KSRDDNQLLGKLSEVVSGDCEPFAYDEGKAIVPCGAIANSLFSDELKLYSVLHKTNVPLL 193

Query: 572 RTGIAWPSDKAVKFHNPPGPDLKEAFKNFAKPTDWKKNIWELDPENPDNNGFQNEDFIVW 631
            TGIAWPSDK +KF NP G DLK+AF+ FAKP +W K+I+ELD +N DNNGFQNED IVW
Sbjct: 194 ETGIAWPSDKNIKFKNPEG-DLKKAFEKFAKPKNWSKHIFELDKKNEDNNGFQNEDLIVW 252

Query: 632 MRTAALPNFRKLYRRVNHEVEGYKSGLPA 660
           MRTAALP FRKLYRRVNH   G+  GL A
Sbjct: 253 MRTAALPTFRKLYRRVNHTEGGFAGGLIA 281

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	667
FB|FBgn0030752	357	CG9947 [Drosophila melanogaste	0.380	0.711	0.534	8.6e-72
ZFIN|ZDB-GENE-040704-26	372	tmem30aa "transmembrane protei	0.382	0.685	0.520	2.1e-68
MGI|MGI:106402	364	Tmem30a "transmembrane protein	0.377	0.692	0.5	4e-67
ZFIN|ZDB-GENE-030131-5884	369	tmem30ab "transmembrane protei	0.361	0.653	0.527	8.2e-67
UNIPROTKB|F1NX30	372	TMEM30A "Cell cycle control pr	0.364	0.653	0.521	4.5e-66
UNIPROTKB|Q5F362	372	TMEM30A "Cell cycle control pr	0.364	0.653	0.521	4.5e-66
UNIPROTKB|E2R2Z8	361	TMEM30A "Uncharacterized prote	0.380	0.703	0.501	1.5e-65
UNIPROTKB|F1PKF1	454	TMEM30A "Uncharacterized prote	0.380	0.559	0.501	1.5e-65
UNIPROTKB|Q9NV96	361	TMEM30A "Cell cycle control pr	0.376	0.695	0.507	2.5e-65
UNIPROTKB|Q17QL5	361	TMEM30A "Uncharacterized prote	0.376	0.695	0.503	4.1e-65

FB|FBgn0030752 CG9947 [Drosophila melanogaster (taxid:7227)]

 Score = 726 (260.6 bits), Expect = 8.6e-72, P = 8.6e-72
 Identities = 140/262 (53%), Positives = 177/262 (67%)

Query:   402 KPKESAFNQQKLPAWQPILTAGTVMPAFFTFGLFFIPIGVGLVYFADNVKELSLDYTHCL 461
             +P +SAF QQ+LPAWQP+LTA TV+P FF  G+ FIPIGV L++ ++   EL +DYT C 
Sbjct:    18 RPSDSAFKQQRLPAWQPVLTARTVLPTFFVIGVLFIPIGVVLLHLSNTANELIIDYTKCR 77

Query:   462 SVEQPDKTCAQIINNSRQMNCTCELQFALSEEIEGNVYIYYGLTNFYQNHRRYVKSRDDL 521
                  + TCA+ +  +  + C CE+ F L  +  G VY+YYGLTN+YQNHRRYVKSRDD 
Sbjct:    78 R-SGGNTTCAEYLEANPGVTCPCEVPFVLPSDFNGVVYMYYGLTNYYQNHRRYVKSRDDE 136

Query:   522 QLTATHSFNLLQPCTLAMY-----LSVAPCGAIANSLFSDSFKIFNDKNKEVPVLRTGIA 576
             QL    S      C    Y       +APCGAIANSLF+D+  +      E+ +L+TGIA
Sbjct:   137 QLLGHLSQTPSTDCAPFAYDPDTGKPIAPCGAIANSLFNDTLTLLQG-GSEIKLLKTGIA 195

Query:   577 WPSDKAVKFHNPPGPDLKEAFKNFAKPTDWKKNIWELDPENPDNNGFQNEDFIVWMRTAA 636
             WPSDK VKF NP G +L  + + F+KP  W+K + +LDPENPDNNGFQNED IVWMRTAA
Sbjct:   196 WPSDKRVKFRNPEG-NLNVSLEGFSKPIFWQKGLADLDPENPDNNGFQNEDLIVWMRTAA 254

Query:   637 LPNFRKLYRRVNHEVEGYKSGL 658
             LP+FRKLYRR+N     Y +GL
Sbjct:   255 LPSFRKLYRRLNQTNTNYANGL 276

GO:0016020 "membrane" evidence=IEA

ZFIN|ZDB-GENE-040704-26 tmem30aa "transmembrane protein 30Aa" [Danio rerio (taxid:7955)]

 Score = 694 (249.4 bits), Expect = 2.1e-68, P = 2.1e-68
 Identities = 141/271 (52%), Positives = 183/271 (67%)

Query:   402 KPKESAFNQQKLPAWQPILTAGTVMPAFFTFGLFFIPIGVGLVYFADNVKELSLDYTHCL 461
             KP  +AF QQ+LPAWQPILTAGTV+PAFF  GL FIPIG+GL   ++N+KE  +DYT  +
Sbjct:    31 KPDNTAFKQQRLPAWQPILTAGTVLPAFFMIGLIFIPIGIGLFVTSNNIKEFEIDYTG-V 89

Query:   462 SVEQPDKTCAQIIN-NSRQMNCTCELQFALSEEIEGNVYIYYGLTNFYQNHRRYVKSRDD 520
              +  P   CAQ  + NS  + CTC + F L +  E NV++YYGL+NFYQNHRRYVKSRDD
Sbjct:    90 DMSSPCYNCAQNYSWNSTSV-CTCTVPFTLDQPFESNVFMYYGLSNFYQNHRRYVKSRDD 148

Query:   521 LQLTATHSFNLLQPCT-LAMYLS-----VAPCGAIANSLFSDSFKIF----NDKNKEVPV 570
              QL    S +LL P      Y +     +APCGAIANSLF+D+ ++F    N     + +
Sbjct:   149 SQLNGDKS-SLLNPSKECEPYRTSDRKPIAPCGAIANSLFNDTLELFYIHPNGSKIGIHL 207

Query:   571 LRTGIAWPSDKAVKFHNPPGPD--LKEAFKNFAKPTDWKKNIWELDPENPDNNGFQNEDF 628
             ++TGIAW +DK VKF NP G +  L   F++ +KP +W+K ++ELDP +P+NNGF NED 
Sbjct:   208 VKTGIAWWTDKHVKFRNPGGSNNNLSVVFQDTSKPVNWRKAVYELDPADPENNGFVNEDL 267

Query:   629 IVWMRTAALPNFRKLYRRVNHEVEGYKSGLP 659
             IVWMRTAALP FRKLYR +  + +     LP
Sbjct:   268 IVWMRTAALPTFRKLYRIIQKKKDTMTPTLP 298

GO:0016020 "membrane" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

MGI|MGI:106402 Tmem30a "transmembrane protein 30A" [Mus musculus (taxid:10090)]

 Score = 682 (245.1 bits), Expect = 4.0e-67, P = 4.0e-67
 Identities = 136/272 (50%), Positives = 184/272 (67%)

Query:   402 KPKESAFNQQKLPAWQPILTAGTVMPAFFTFGLFFIPIGVGLVYFADNVKELSLDYTHCL 461
             +P  +AF QQ+LPAWQPILTAGTV+P FF  GL FIPIG+G+   ++N++E+ +DYT   
Sbjct:    27 RPDNTAFKQQRLPAWQPILTAGTVLPTFFIIGLIFIPIGIGIFVTSNNIREIEIDYTGT- 85

Query:   462 SVEQPDKTCAQIINNSRQMNCTCELQFALSEEIEGNVYIYYGLTNFYQNHRRYVKSRDDL 521
                +P   C + ++ +   +C C + F L +  EGNV++YYGL+NFYQNHRRYVKSRDD 
Sbjct:    86 ---EPSSPCNKCLSPN-VTSCACTINFTLKQSFEGNVFMYYGLSNFYQNHRRYVKSRDDS 141

Query:   522 QLTATHSFNLLQPCT-LAMYLS-----VAPCGAIANSLFSDSFKIF---NDKNKE---VP 569
             QL    S  LL P      Y       +APCGAIANS+F+D+ +++   N+ + +   +P
Sbjct:   142 QLNGDPSA-LLNPSKECEPYRRNEDRPIAPCGAIANSMFNDTLELYLVANESDPKPIPIP 200

Query:   570 VLRTGIAWPSDKAVKFHNPPGPD-LKEAFKNFAKPTDWKKNIWELDPENPDNNGFQNEDF 628
             + + GIAW +DK VKF NPPG + L+E FK+  KP +W K ++ELDPE+  NNGF NEDF
Sbjct:   201 LKKKGIAWWTDKNVKFRNPPGKESLEEKFKDTIKPVNWHKAVYELDPEDESNNGFINEDF 260

Query:   629 IVWMRTAALPNFRKLYRRVNHEVEGYKSGLPA 660
             IVWMRTAALP FRKLYR +    + + + LPA
Sbjct:   261 IVWMRTAALPTFRKLYRLIERRDDLHPT-LPA 291

GO:0003674 "molecular_function" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0031175 "neuron projection development" evidence=ISO

GO:0036010 "protein localization to endosome" evidence=ISO

GO:0070863 "positive regulation of protein exit from endoplasmic reticulum" evidence=ISO

ZFIN|ZDB-GENE-030131-5884 tmem30ab "transmembrane protein 30Ab" [Danio rerio (taxid:7955)]

 Score = 679 (244.1 bits), Expect = 8.2e-67, P = 8.2e-67
 Identities = 135/256 (52%), Positives = 174/256 (67%)

Query:   402 KPKESAFNQQKLPAWQPILTAGTVMPAFFTFGLFFIPIGVGLVYFADNVKELSLDYTHCL 461
             KP  +AF QQ+LPAWQPILTAGTV+PAFF  GL FIPIG+GL   ++N+KE  +DYT   
Sbjct:    30 KPDNTAFKQQRLPAWQPILTAGTVLPAFFVIGLIFIPIGIGLYVTSNNIKEFEIDYTGT- 88

Query:   462 SVEQPDKTCAQIINNSRQMNCTCELQFALSEEIEGNVYIYYGLTNFYQNHRRYVKSRDDL 521
              +  P   C+Q  + +    C C L F+L +  E NV++YYGL+NFYQNHRRYVKSRDD 
Sbjct:    89 DMSSPCFNCSQSFSWNSTTPCKCTLSFSLDQPFESNVFMYYGLSNFYQNHRRYVKSRDDS 148

Query:   522 QLTATHSFNLLQP---CT---LAMYLSVAPCGAIANSLFSDSFKIF----NDKNKEVPVL 571
             QL      +L +P   C    +     +APCGAIANS+F+D+  +F    N    ++P++
Sbjct:   149 QLNGDER-SLKEPSKECEPYRINDNKRIAPCGAIANSMFNDTLDLFYIDPNGTKTQIPMI 207

Query:   572 RTGIAWPSDKAVKFHNPPG--PDLKEAFKNFAKPTDWKKNIWELDPENPDNNGFQNEDFI 629
             + GIAW +DK VKF NP G  P+L   F + AKP +W+K ++ELD + P+NNGF NEDFI
Sbjct:   208 KKGIAWWTDKHVKFRNPGGNNPNLTAVFIDTAKPINWRKPVYELDTD-PENNGFINEDFI 266

Query:   630 VWMRTAALPNFRKLYR 645
             VWMRTAALP FRKLYR
Sbjct:   267 VWMRTAALPTFRKLYR 282

GO:0016020 "membrane" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|F1NX30 TMEM30A "Cell cycle control protein 50A" [Gallus gallus (taxid:9031)]

 Score = 672 (241.6 bits), Expect = 4.5e-66, P = 4.5e-66
 Identities = 136/261 (52%), Positives = 174/261 (66%)

Query:   402 KPKESAFNQQKLPAWQPILTAGTVMPAFFTFGLFFIPIGVGLVYFADNVKELSLDYTHCL 461
             KP  +AF QQ+LPAWQPILTAGTV+PAFF  GL FIPIG+G+   ++N++E  +DYT   
Sbjct:    36 KPDNTAFKQQRLPAWQPILTAGTVLPAFFIIGLIFIPIGIGIFVTSNNIREYEIDYT--- 92

Query:   462 SVEQPDKTCAQIINNSRQMN--CTCELQFALSEEIEGNVYIYYGLTNFYQNHRRYVKSRD 519
              VE P   C + +N S      CTC + F L    E NV++YYGL+NFYQNHRRYVKSRD
Sbjct:    93 GVE-PSSPCNKCLNVSWDSTPPCTCTINFTLEHSFESNVFMYYGLSNFYQNHRRYVKSRD 151

Query:   520 DLQLTATHSFNLLQPCT-LAMYLS-----VAPCGAIANSLFSDSFKIF---NDKNKEVPV 570
             D QL   +S +LL P      Y +     +APCGAIANS+F+D+ +++   ND    + +
Sbjct:   152 DSQLNGDNS-SLLNPSKECEPYRTNEDKPIAPCGAIANSMFNDTLELYHIENDTRTAITL 210

Query:   571 LRTGIAWPSDKAVKFHNPPGP-DLKEAFKNFAKPTDWKKNIWELDPENPDNNGFQNEDFI 629
             ++ GIAW +DK VKF NP G  +L   F+   KP +W K ++ LD E PDNNGF NEDFI
Sbjct:   211 IKKGIAWWTDKNVKFRNPKGDGNLTALFQGTTKPVNWPKPVYMLDSE-PDNNGFINEDFI 269

Query:   630 VWMRTAALPNFRKLYRRVNHE 650
             VWMRTAALP FRKLYR +  +
Sbjct:   270 VWMRTAALPTFRKLYRLIERK 290

GO:0016020 "membrane" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0036010 "protein localization to endosome" evidence=IEA

GO:0070863 "positive regulation of protein exit from endoplasmic reticulum" evidence=IEA

UNIPROTKB|Q5F362 TMEM30A "Cell cycle control protein 50A" [Gallus gallus (taxid:9031)]

 Score = 672 (241.6 bits), Expect = 4.5e-66, P = 4.5e-66
 Identities = 136/261 (52%), Positives = 174/261 (66%)

Query:   402 KPKESAFNQQKLPAWQPILTAGTVMPAFFTFGLFFIPIGVGLVYFADNVKELSLDYTHCL 461
             KP  +AF QQ+LPAWQPILTAGTV+PAFF  GL FIPIG+G+   ++N++E  +DYT   
Sbjct:    36 KPDNTAFKQQRLPAWQPILTAGTVLPAFFIIGLIFIPIGIGIFVTSNNIREYEIDYT--- 92

Query:   462 SVEQPDKTCAQIINNSRQMN--CTCELQFALSEEIEGNVYIYYGLTNFYQNHRRYVKSRD 519
              VE P   C + +N S      CTC + F L    E NV++YYGL+NFYQNHRRYVKSRD
Sbjct:    93 GVE-PSSPCNKCLNVSWDSTPPCTCTINFTLEHSFESNVFMYYGLSNFYQNHRRYVKSRD 151

Query:   520 DLQLTATHSFNLLQPCT-LAMYLS-----VAPCGAIANSLFSDSFKIF---NDKNKEVPV 570
             D QL   +S +LL P      Y +     +APCGAIANS+F+D+ +++   ND    + +
Sbjct:   152 DSQLNGDNS-SLLNPSKECEPYRTNEDKPIAPCGAIANSMFNDTLELYHIENDTRTAITL 210

Query:   571 LRTGIAWPSDKAVKFHNPPGP-DLKEAFKNFAKPTDWKKNIWELDPENPDNNGFQNEDFI 629
             ++ GIAW +DK VKF NP G  +L   F+   KP +W K ++ LD E PDNNGF NEDFI
Sbjct:   211 IKKGIAWWTDKNVKFRNPKGDGNLTALFQGTTKPVNWPKPVYMLDSE-PDNNGFINEDFI 269

Query:   630 VWMRTAALPNFRKLYRRVNHE 650
             VWMRTAALP FRKLYR +  +
Sbjct:   270 VWMRTAALPTFRKLYRLIERK 290

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|E2R2Z8 TMEM30A "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 667 (239.9 bits), Expect = 1.5e-65, P = 1.5e-65
 Identities = 137/273 (50%), Positives = 179/273 (65%)

Query:   399 QNYKPKESAFNQQKLPAWQPILTAGTVMPAFFTFGLFFIPIGVGLVYFADNVKELSLDYT 458
             +N +P  +AF QQ+LPAWQPILTAGTV+P FF  GL FIPIG+G+   ++N++E+ +DYT
Sbjct:    24 KNRRPDNTAFKQQRLPAWQPILTAGTVLPTFFIIGLIFIPIGIGIFVTSNNIREIEIDYT 83

Query:   459 HCLSVEQPDKTCAQIINNSRQMNCTCELQFALSEEIEGNVYIYYGLTNFYQNHRRYVKSR 518
                    P   C + ++ +    C C + F L +  EGNV++YYGL+NFYQNHRRYVKSR
Sbjct:    84 GT----DPSSPCNKCLSPN-VTPCICTINFTLEQSFEGNVFMYYGLSNFYQNHRRYVKSR 138

Query:   519 DDLQLTATHSFNLLQPCT-LAMYLS-----VAPCGAIANSLFSDSFKIFNDKNKE----V 568
             DD QL    S  LL P      Y       +APCGAIANS+F+D+ ++F   N+     +
Sbjct:   139 DDSQLNGD-SGALLNPSKECEPYRRNEDKPIAPCGAIANSMFNDTLELFLVGNESYPTPI 197

Query:   569 PVLRTGIAWPSDKAVKFHNPPGPD-LKEAFKNFAKPTDWKKNIWELDPENPDNNGFQNED 627
             P+ + GIAW +DK VKF NPPG   L+E FK    P +W K ++ LD E PDNNGF NED
Sbjct:   198 PLKKKGIAWWTDKNVKFRNPPGDQSLEERFKGTTNPVNWVKPVYMLDSE-PDNNGFINED 256

Query:   628 FIVWMRTAALPNFRKLYRRVNHEVEGYKSGLPA 660
             FIVWMRTAALP FRKLYR +  + + + + LPA
Sbjct:   257 FIVWMRTAALPTFRKLYRLIERKSDLHPT-LPA 288

GO:0070863 "positive regulation of protein exit from endoplasmic reticulum" evidence=IEA

GO:0036010 "protein localization to endosome" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|F1PKF1 TMEM30A "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 667 (239.9 bits), Expect = 1.5e-65, P = 1.5e-65
 Identities = 137/273 (50%), Positives = 179/273 (65%)

Query:   399 QNYKPKESAFNQQKLPAWQPILTAGTVMPAFFTFGLFFIPIGVGLVYFADNVKELSLDYT 458
             +N +P  +AF QQ+LPAWQPILTAGTV+P FF  GL FIPIG+G+   ++N++E+ +DYT
Sbjct:   117 KNRRPDNTAFKQQRLPAWQPILTAGTVLPTFFIIGLIFIPIGIGIFVTSNNIREIEIDYT 176

Query:   459 HCLSVEQPDKTCAQIINNSRQMNCTCELQFALSEEIEGNVYIYYGLTNFYQNHRRYVKSR 518
                    P   C + ++ +    C C + F L +  EGNV++YYGL+NFYQNHRRYVKSR
Sbjct:   177 GT----DPSSPCNKCLSPN-VTPCICTINFTLEQSFEGNVFMYYGLSNFYQNHRRYVKSR 231

Query:   519 DDLQLTATHSFNLLQPCT-LAMYLS-----VAPCGAIANSLFSDSFKIFNDKNKE----V 568
             DD QL    S  LL P      Y       +APCGAIANS+F+D+ ++F   N+     +
Sbjct:   232 DDSQLNGD-SGALLNPSKECEPYRRNEDKPIAPCGAIANSMFNDTLELFLVGNESYPTPI 290

Query:   569 PVLRTGIAWPSDKAVKFHNPPGPD-LKEAFKNFAKPTDWKKNIWELDPENPDNNGFQNED 627
             P+ + GIAW +DK VKF NPPG   L+E FK    P +W K ++ LD E PDNNGF NED
Sbjct:   291 PLKKKGIAWWTDKNVKFRNPPGDQSLEERFKGTTNPVNWVKPVYMLDSE-PDNNGFINED 349

Query:   628 FIVWMRTAALPNFRKLYRRVNHEVEGYKSGLPA 660
             FIVWMRTAALP FRKLYR +  + + + + LPA
Sbjct:   350 FIVWMRTAALPTFRKLYRLIERKSDLHPT-LPA 381

GO:0070863 "positive regulation of protein exit from endoplasmic reticulum" evidence=IEA

GO:0036010 "protein localization to endosome" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|Q9NV96 TMEM30A "Cell cycle control protein 50A" [Homo sapiens (taxid:9606)]

 Score = 665 (239.2 bits), Expect = 2.5e-65, P = 2.5e-65
 Identities = 137/270 (50%), Positives = 177/270 (65%)

Query:   402 KPKESAFNQQKLPAWQPILTAGTVMPAFFTFGLFFIPIGVGLVYFADNVKELSLDYTHCL 461
             +P  +AF QQ+LPAWQPILTAGTV+P FF  GL FIPIG+G+   ++N++E+ +DYT   
Sbjct:    27 RPDNTAFKQQRLPAWQPILTAGTVLPIFFIIGLIFIPIGIGIFVTSNNIREIEIDYTGT- 85

Query:   462 SVEQPDKTCAQIINNSRQMNCTCELQFALSEEIEGNVYIYYGLTNFYQNHRRYVKSRDDL 521
                +P   C + ++      C C + F L +  EGNV++YYGL+NFYQNHRRYVKSRDD 
Sbjct:    86 ---EPSSPCNKCLSPD-VTPCFCTINFTLEKSFEGNVFMYYGLSNFYQNHRRYVKSRDDS 141

Query:   522 QLTATHSFNLLQPCT-LAMYLS-----VAPCGAIANSLFSDSFKIFNDKNKEVPV----L 571
             QL    S  LL P      Y       +APCGAIANS+F+D+ ++F   N   P+     
Sbjct:   142 QLNGDSSA-LLNPSKECEPYRRNEDKPIAPCGAIANSMFNDTLELFLIGNDSYPIPIALK 200

Query:   572 RTGIAWPSDKAVKFHNPPGPD-LKEAFKNFAKPTDWKKNIWELDPENPDNNGFQNEDFIV 630
             + GIAW +DK VKF NPPG D L+E FK   KP +W K ++ LD + PDNNGF NEDFIV
Sbjct:   201 KKGIAWWTDKNVKFRNPPGGDNLEERFKGTTKPVNWLKPVYMLDSD-PDNNGFINEDFIV 259

Query:   631 WMRTAALPNFRKLYRRVNHEVEGYKSGLPA 660
             WMRTAALP FRKLYR +  + + + + LPA
Sbjct:   260 WMRTAALPTFRKLYRLIERKSDLHPT-LPA 288

GO:0016021 "integral to membrane" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0070863 "positive regulation of protein exit from endoplasmic reticulum" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0036010 "protein localization to endosome" evidence=IMP

UNIPROTKB|Q17QL5 TMEM30A "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 663 (238.4 bits), Expect = 4.1e-65, P = 4.1e-65
 Identities = 136/270 (50%), Positives = 177/270 (65%)

Query:   402 KPKESAFNQQKLPAWQPILTAGTVMPAFFTFGLFFIPIGVGLVYFADNVKELSLDYTHCL 461
             +P  +AF QQ+LPAWQPILTAGTV+P FF  GL FIPIG+G+   ++N++E+ +DYT   
Sbjct:    27 RPDNTAFKQQRLPAWQPILTAGTVLPTFFIIGLIFIPIGIGIFVTSNNIREIEIDYTGT- 85

Query:   462 SVEQPDKTCAQIINNSRQMNCTCELQFALSEEIEGNVYIYYGLTNFYQNHRRYVKSRDDL 521
                 P   C + ++ +    C C + F L +  EGNV++YYGL+NFYQNHRRYVKSRDD 
Sbjct:    86 ---DPSSPCNKCLSPN-VTPCVCTINFTLEQSFEGNVFMYYGLSNFYQNHRRYVKSRDDG 141

Query:   522 QLTATHSFNLLQPCT-LAMYLS-----VAPCGAIANSLFSDSFKIFNDKNKE----VPVL 571
             QL    S  LL P      Y       +APCGAIANS+F+D+ ++F   N      +P+ 
Sbjct:   142 QLNGDPSA-LLNPSKECEPYRRNEDKPIAPCGAIANSMFNDTLELFQVGNASDLTPIPLK 200

Query:   572 RTGIAWPSDKAVKFHNPPGPD-LKEAFKNFAKPTDWKKNIWELDPENPDNNGFQNEDFIV 630
             + GIAW +DK VKF NPPG D L+E FK   KP +W K ++ LD +  DNNGF NEDFIV
Sbjct:   201 KKGIAWWTDKNVKFRNPPGTDPLEERFKGTTKPVNWVKPVYMLDSDE-DNNGFINEDFIV 259

Query:   631 WMRTAALPNFRKLYRRVNHEVEGYKSGLPA 660
             WMRTAALP FRKLYR +  + + + + LPA
Sbjct:   260 WMRTAALPTFRKLYRLIERKNDLHPT-LPA 288

GO:0070863 "positive regulation of protein exit from endoplasmic reticulum" evidence=IEA

GO:0036010 "protein localization to endosome" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q5F362	CC50A_CHICK	No assigned EC number	0.5193	0.3598	0.6451	yes	N/A
Q8VEK0	CC50A_MOUSE	No assigned EC number	0.5077	0.3613	0.6620	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	667
pfam03381	275	pfam03381, CDC50, LEM3 (ligand-effect modulator 3)	1e-67
COG5035	372	COG5035, CDC50, Cell cycle control protein [Cell d	2e-51
pfam00858	442	pfam00858, ASC, Amiloride-sensitive sodium channel	2e-42
TIGR00859	595	TIGR00859, ENaC, sodium channel transporter	4e-04
pfam00858	442	pfam00858, ASC, Amiloride-sensitive sodium channel	0.001

>gnl|CDD|217523 pfam03381, CDC50, LEM3 (ligand-effect modulator 3) family / CDC50 family

 Score =  222 bits (567), Expect = 1e-67
 Identities = 90/215 (41%), Positives = 118/215 (54%), Gaps = 21/215 (9%)

Query: 443 LVYFADNVKELSLDYTHCLSVEQPDKTCAQIINNSRQMNCTCELQFALSEEIEGNVYIYY 502
           L+  ++NV+E+ + Y  C           +I  +  ++  TC + F + E+++G VY YY
Sbjct: 1   LLVASNNVQEIEIRYDDC------CTAAPEIGESFAEIPSTCTITFTIPEDMKGPVYFYY 54

Query: 503 GLTNFYQNHRRYVKSRDDLQL---TATHSFNLLQPCTLAMYLS--VAPCGAIANSLFSDS 557
            LTNFYQNHRRYVKSR D QL     +   N  +P     Y    +APCG IANS+F+D+
Sbjct: 55  QLTNFYQNHRRYVKSRSDDQLRGKAVSGDDNNCEPLRSNDYNGKPIAPCGLIANSMFNDT 114

Query: 558 FKIFNDKN--KEVPVLRTGIAWPSDKAVKFHNPPGPDLKEAFKNFAKPTDWKKNIWELDP 615
           F +    N    V + + GIAW SDK  KF N               P +WK N +E D 
Sbjct: 115 FSLPLANNGTTNVTLDKKGIAWSSDKEKKFKNTKYNP-----SGTVPPPNWKPN-YEDDH 168

Query: 616 ENPDNNGFQNEDFIVWMRTAALPNFRKLYRRVNHE 650
             PDN    NEDFIVWMRTAALP FRKLYRR++  
Sbjct: 169 TIPDNQT--NEDFIVWMRTAALPTFRKLYRRIDAT 201

Members of this family have been predicted to contain transmembrane helices. The family member LEM3 is a ligand-effect modulator, mutation of which increases glucocorticoid receptor activity in response to dexamethasone and also confers increased activity on other intracellular receptors including the progesterone, oestrogen and mineralocorticoid receptors. LEM3 is thought to affect a downstream step in the glucocorticoid receptor pathway. Factors that modulate ligand responsiveness are likely to contribute to the context-specific actions of the glucocorticoid receptor in mammalian cells. The products of genes YNR048w, YNL323w and YCR094w (CDC50) show redundancy of function and are involved in regulation of transcription via CDC39. CDC39 (also known as NOT1) is normally a negative regulator of transcription either by affecting the general RNA polymerase II machinery or by altering chromatin structure. One function of CDC39 is to block activation of the mating response pathway in the absence of pheromone, and mutation causes arrest in G1 by activation of the pathway. It may be that the cold-sensitive arrest in G1 noticed in CDC50 mutants may be due to inactivation of CDC39. The effects of LEM3 on glucocorticoid receptor activity may also be due to effects on transcription via CDC39. Length = 275

>gnl|CDD|227368 COG5035, CDC50, Cell cycle control protein [Cell division and chromosome partitioning / Transcription / Signal transduction mechanisms]

 Score =  182 bits (463), Expect = 2e-51
 Identities = 101/291 (34%), Positives = 145/291 (49%), Gaps = 37/291 (12%)

Query: 385 NHDEPDIVLNSNQKQNYKPKESAFNQQKLPAWQPILTAGTVMPAFFTFGLFFIPIGVGLV 444
             D+  IV   +  ++ +P  +AF QQ+L AWQPIL+  TV+P  F  G+ F P+G GL+
Sbjct: 5   RKDKKAIVSKPSLLKSRRPPNTAFRQQRLKAWQPILSPRTVLPLLFLIGIVFAPLGGGLL 64

Query: 445 YFADNVKELSLDYTHCLSV----------EQPDKTCAQIINNSRQM---------NCTCE 485
             + +V+EL++DYT C+++          E       + +N   Q             C+
Sbjct: 65  VASSSVQELTIDYTDCMTLASDEFSDIPSEYIQFHFKKKVNVLPQWRFSTDEEDDFQKCQ 124

Query: 486 LQFALSEEIEGNVYIYYGLTNFYQNHRRYVKSRDDLQL--TATHSFNLLQPCTLAMYLS- 542
           ++F +  +++  V+IYY LTNFYQNHRRYVKS D+ QL   A  S +L   C    Y   
Sbjct: 125 IRFTVPSDMKKPVFIYYRLTNFYQNHRRYVKSFDEDQLRGEALKSDDLKSNCKPLSYNED 184

Query: 543 --VAPCGAIANSLFSDSFKIF--NDKNKEVPVLRT-GIAWPSDKAVKFHNPPGPDLKEAF 597
             + PCG IANS+F+D+F       ++     L T GIAW SD+    +       K   
Sbjct: 185 KIIYPCGLIANSMFNDTFSSLLTGIEDTSNYNLTTKGIAWESDR--HRYKKT----KYNA 238

Query: 598 KNFAKPTDWKKNI--WELDPENPDNNGFQNEDFIVWMRTAALPNFRKLYRR 646
            +   P +W K       D   PD +    E+F  WMRTAA P F KL  R
Sbjct: 239 SDIVPPPNWAKMYPDGYTDDNIPDLS--TWEEFQNWMRTAAFPKFSKLAMR 287

Length = 372

>gnl|CDD|216157 pfam00858, ASC, Amiloride-sensitive sodium channel

 Score =  159 bits (403), Expect = 2e-42
 Identities = 64/199 (32%), Positives = 95/199 (47%), Gaps = 17/199 (8%)

Query: 151 NAPVDSIPWRPWGAGRHLGLTVVLDANIEEYF-CSSEASYGFKLLLQNPVETPKLAAFGE 209
               +S P R    G   GL++VLD   +EY      +S GFK+L+ +P E P + + G 
Sbjct: 182 GQTGNSYPLRSSRPGPGNGLSLVLDIQQDEYLYSPGTSSAGFKVLIHSPNEYPFVDSLGF 241

Query: 210 LISPGRESLIVIKPIINKSNPSIATSDPELRQCLFNKERALRFYRHYTQRNCILECEANF 269
            + PG E+ I ++P    ++P +    P  R C F+ ER L +++ Y+Q NC+LEC AN+
Sbjct: 242 TVPPGTETFISVRPQETSTSPELRRLPPPYRNCTFSDERNLYYFKIYSQSNCLLECRANY 301

Query: 270 TLSFCQCVMYFMPKDRFTRICGKKDT-DCADKAKLAMEMRLSQNLSNISKIFNDTTQKPN 328
            L  C CV YFMP++    +C  +D  +C D A                  F+       
Sbjct: 302 LLKLCGCVPYFMPRNNNAPVCTPRDLRECLDDAL---------------DEFSTEEDSLG 346

Query: 329 CGCLPGCFSLGYSKTQSSS 347
           C CLP C    Y    SS+
Sbjct: 347 CDCLPPCNETEYDVELSSA 365

Length = 442

>gnl|CDD|233154 TIGR00859, ENaC, sodium channel transporter

 Score = 43.2 bits (102), Expect = 4e-04
 Identities = 30/122 (24%), Positives = 53/122 (43%), Gaps = 19/122 (15%)

Query: 169 GLTVVLDANIEEY--FCSSEASYGFKLLLQNPVETPKLAAFGELISPGRESLIVIK--PI 224
           GL +VLD   +EY    S+EA  G ++++ +  E P +   G  + PG E+ I ++   +
Sbjct: 274 GLKLVLDIEQDEYLPLLSTEA--GARVMVHSQDEPPFIDDLGFGVRPGTETSISMQEDEL 331

Query: 225 INKSNP----SIATSDPELRQCLFNKERALRFYRHYTQRNCILECEANFTLSFCQCVMYF 280
                P    +   SD  + + L+N          Y+ + C+  C   + +  C C  Y 
Sbjct: 332 QRLGGPYGDCTENGSDVPV-ENLYNSS--------YSIQACLRSCFQRYMVENCGCAYYH 382

Query: 281 MP 282
            P
Sbjct: 383 YP 384

The Epithelial Na+ Channel (ENaC) Family (TC 1.A.06)The ENaC family consists of sodium channels from animals and has no recognizable homologues in other eukaryotes or bacteria. The vertebrate ENaC proteins from epithelial cells cluster tightly together on the phylogenetic tree: voltage-insensitive ENaC homologues are also found in the brain. Eleven sequenced C. elegans proteins, including the degenerins, are distantly related to the vertebrate proteins as well as to each other. At least some ofthese proteins form part of a mechano-transducing complex for touch sensitivity. Other members of the ENaC family, the acid-sensing ion channels, ASIC1-3,are homo- or hetero-oligomeric neuronal H+-gated channels that mediate pain sensation in response to tissue acidosis. The homologous Helix aspersa(FMRF-amide)-activated Na+ channel is the first peptide neurotransmitter-gated ionotropic receptor to be sequenced.Mammalian ENaC is important for the maintenance of Na+ balance and the regulation of blood pressure. Three homologous ENaC subunits, a, b and g, havebeen shown to assemble to form the highly Na+-selective channel.This model is designed from the vertebrate members of the ENaC family [Transport and binding proteins, Cations and iron carrying compounds]. Length = 595

>gnl|CDD|216157 pfam00858, ASC, Amiloride-sensitive sodium channel

 Score = 41.6 bits (98), Expect = 0.001
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)

Query: 42  NAPVDSIPWRPWGAGRHLGLTVVLDANIEEYF-CSSEASYGFKSIV 86
               +S P R    G   GL++VLD   +EY      +S GFK ++
Sbjct: 182 GQTGNSYPLRSSRPGPGNGLSLVLDIQQDEYLYSPGTSSAGFKVLI 227

Length = 442

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	667
KOG2952|consensus	351		100.0
COG5035	372	CDC50 Cell cycle control protein [Cell division an	100.0
PF03381	278	CDC50: LEM3 (ligand-effect modulator 3) family / C	100.0
TIGR00859	595	ENaC sodium channel transporter. This model is des	100.0
TIGR00867	601	deg-1 degenerin. This model is designed from the i	100.0
PF00858	439	ASC: Amiloride-sensitive sodium channel; InterPro:	99.97
KOG4294|consensus	520		99.95
TIGR00867	601	deg-1 degenerin. This model is designed from the i	97.32
TIGR00859	595	ENaC sodium channel transporter. This model is des	97.21
PF00858	439	ASC: Amiloride-sensitive sodium channel; InterPro:	96.07
KOG4294|consensus	520		81.79

>KOG2952|consensus

Probab=100.00  E-value=1.8e-81  Score=641.71  Aligned_cols=259  Identities=44%  Similarity=0.798  Sum_probs=226.8

Q ss_pred             ccccccCCCcCCccccccCcceeeeccCccchhHHHHHHHHHHHHHHhhhheeCceEEEEeecccccCCCCCCcchhhhh
Q psy10865        395 SNQKQNYKPKESAFNQQKLPAWQPILTAGTVMPAFFTFGLFFIPIGVGLVYFADNVKELSLDYTHCLSVEQPDKTCAQII  474 (667)
Q Consensus       395 ~~~~~~~~p~~t~f~QQ~L~aw~PilTp~~v~~~~~~ig~ifi~iGi~~~~~s~~v~E~~i~Y~~~~~~~~~~~~~~~~~  474 (667)
                      ..+.+++||++++|+|||||||||+|||++||++||++|++|||||++++++|++|+|++++|++|...+. +..+++++
T Consensus        15 ~~~~~s~rP~~t~f~QQrLpA~qPilt~~~vlp~f~i~g~vFipiGv~l~~as~~v~Ei~i~YTdc~~~~~-~~~~~~~~   93 (351)
T KOG2952|consen   15 GNRKKSRRPKNTAFKQQRLPAWQPILTPRTVLPLFFIIGVVFLPIGVGLLFASSKVIEITIRYTDCIPTGF-RTNPSEYI   93 (351)
T ss_pred             chhhhccCCccccchhccccccccccCcchHHHHHHHHHHHHHhhhhheeEeecceEEEEEecccCccccc-cccchhhh
Confidence            45778999999999999999999999999999999999999999999999999999999999999987653 55666666


Q ss_pred             ccCCCCCceeEEEEEeccccccceEEEEEecchhhhhhhhhcCCCcccccCCCCC-CCCCCCCcccc----ccccccchh
Q psy10865        475 NNSRQMNCTCELQFALSEEIEGNVYIYYGLTNFYQNHRRYVKSRDDLQLTATHSF-NLLQPCTLAMY----LSVAPCGAI  549 (667)
Q Consensus       475 ~~~~~~~~~C~~~f~i~~~m~~pvy~YY~L~nFyQNhrryv~S~s~~QL~G~~~~-~~~~~C~P~~~----~~i~PCGli  549 (667)
                      +....+.+.|+++|+||++|++|||+||+|+||||||||||+|||++||+|+... ...+.|+|+.+    ++|+|||||
T Consensus        94 ~~~~~~~~~C~~~f~vp~~~k~pVy~YY~L~nfyQNhRRYvkSr~d~QL~G~~~~~~~~~~C~Pl~~~~~~kpi~PCGlI  173 (351)
T KOG2952|consen   94 QGHFDQTKSCTITFTVPKDMKGPVYLYYELTNFYQNHRRYVKSRDDKQLRGEPSKELNVKSCAPLEYNEGGKPIYPCGLI  173 (351)
T ss_pred             hcccCcccceEEEEEccccCCCCEEEEEehhHHHHHHHHHHhcccHHHhcCCCccccCccCCCcceecCCCceeeecchh
Confidence            6544455889999999999999999999999999999999999999999998764 34456999987    899999999


Q ss_pred             hhcccccceeecc-C-CCceeccccccCCCcccccccCCCCCCCChhhhccCCCCCcccccccccCCCCCCCCCCCCchh
Q psy10865        550 ANSLFSDSFKIFN-D-KNKEVPVLRTGIAWPSDKAVKFHNPPGPDLKEAFKNFAKPTDWKKNIWELDPENPDNNGFQNED  627 (667)
Q Consensus       550 A~S~FNDtf~l~~-~-~~~~~~~~~~gIaw~sD~~~kf~~p~~~~~~~~~~~~~~p~~w~~~~~~~~~~~~~~~g~~ne~  627 (667)
                      |||||||||++.+ + +...++++++||||++|+ +||+||..     +.+++++||+|+++.++.+..++.-.+++||+
T Consensus       174 AnSlFNDTf~~~~~~~~~~~~~l~~kgIaW~sDk-~kf~~p~~-----n~~~~~pPpnW~k~~~~gg~~d~n~pl~~ned  247 (351)
T KOG2952|consen  174 ANSLFNDTFELSLTNDGDSDYPLTTKGIAWESDK-HKFRKPIY-----NASGIVPPPNWQKGYPEGGYTDDNIPLSENED  247 (351)
T ss_pred             cchhcccccchhcccCCCccceeccCCccchhhh-hhhcCCCC-----ccccccCCccccccCCcCCcCCCCCCchhhHH
Confidence            9999999999976 2 222789999999999999 79999862     33789999999999877641122112699999


Q ss_pred             HHHHHhhCCCCchhheeeeeeccccCcCCCCCCeeEEec
Q psy10865        628 FIVWMRTAALPNFRKLYRRVNHEVEGYKSGLPAVKIKKK  666 (667)
Q Consensus       628 fivWMr~aalp~FrKLyg~i~~~~~~~~~~L~~G~Y~i~  666 (667)
                      ||||||+||||+||||||||+.      ++|++|+|+++
T Consensus       248 fivWMRtAAlPtFrKLy~~i~~------~gL~~G~y~l~  280 (351)
T KOG2952|consen  248 FIVWMRTAALPTFRKLYRIIES------NGLPKGTYQLN  280 (351)
T ss_pred             HHHHHHhcccchHHHHHhhhcc------CCCCCceEEEE
Confidence            9999999999999999999995      68999999885

>COG5035 CDC50 Cell cycle control protein [Cell division and chromosome partitioning / Transcription / Signal transduction mechanisms]

Probab=100.00  E-value=3.6e-72  Score=558.66  Aligned_cols=268  Identities=35%  Similarity=0.618  Sum_probs=223.9

Q ss_pred             CCCcccccccccccCCCcCCccccccCcceeeeccCccchhHHHHHHHHHHHHHHhhhheeCceEEEEeecccccCCCC-
Q psy10865        387 DEPDIVLNSNQKQNYKPKESAFNQQKLPAWQPILTAGTVMPAFFTFGLFFIPIGVGLVYFADNVKELSLDYTHCLSVEQ-  465 (667)
Q Consensus       387 d~~~~~~~~~~~~~~~p~~t~f~QQ~L~aw~PilTp~~v~~~~~~ig~ifi~iGi~~~~~s~~v~E~~i~Y~~~~~~~~-  465 (667)
                      +....+.+....++|||.+++|+|||||||||+|||++|+++||+||++|.|||+.+++++.+|+|++|+|++|...+. 
T Consensus         7 ~~~~~~sk~~~~k~r~p~nt~F~QQrL~awqpilsp~~vLpL~flig~vf~plG~gl~~~~s~VqeltI~Ytdc~t~as~   86 (372)
T COG5035           7 DKKAIVSKPSLLKSRRPPNTAFRQQRLKAWQPILSPRTVLPLLFLIGIVFAPLGGGLLVASSSVQELTIDYTDCMTLASD   86 (372)
T ss_pred             cccccccCcccccccCCchhhHHHhhccccccccCchHHHHHHHHHHHHHhhccceEEEEeeeeeeeeecccccccccch
Confidence            3344444556778999999999999999999999999999999999999999999999999999999999999987652 


Q ss_pred             -----CCcch---------hhhhcc----CCCCCceeEEEEEeccccccceEEEEEecchhhhhhhhhcCCCcccccCCC
Q psy10865        466 -----PDKTC---------AQIINN----SRQMNCTCELQFALSEEIEGNVYIYYGLTNFYQNHRRYVKSRDDLQLTATH  527 (667)
Q Consensus       466 -----~~~~~---------~~~~~~----~~~~~~~C~~~f~i~~~m~~pvy~YY~L~nFyQNhrryv~S~s~~QL~G~~  527 (667)
                           |.++.         ....|.    ...+..+|++.|++|++||.|||+||+|+|||||||||++|.|.+||+|+.
T Consensus        87 ~f~~iPs~~~~~~f~~~~~~~pqW~~~~~~~~d~~~C~irf~vp~~~k~~vfiyyrl~nFyQNhrRY~~S~d~dQl~Ge~  166 (372)
T COG5035          87 EFSDIPSEYIQFHFKKKVNVLPQWRFSTDEEDDFQKCQIRFTVPSDMKKPVFIYYRLTNFYQNHRRYVKSFDEDQLRGEA  166 (372)
T ss_pred             hhhhCchhheeeeeecccccccceeecccccCCcceeEEEEEchhhcccceeeeehhHHHHHhhHHHHhccCHHHhcCcc
Confidence                 11111         112231    122346899999999999999999999999999999999999999999998


Q ss_pred             CC--CCCCCCCcccc---ccccccchhhhcccccceeecc---CCCceeccccccCCCcccccccCCCCCCCChhhhccC
Q psy10865        528 SF--NLLQPCTLAMY---LSVAPCGAIANSLFSDSFKIFN---DKNKEVPVLRTGIAWPSDKAVKFHNPPGPDLKEAFKN  599 (667)
Q Consensus       528 ~~--~~~~~C~P~~~---~~i~PCGliA~S~FNDtf~l~~---~~~~~~~~~~~gIaw~sD~~~kf~~p~~~~~~~~~~~  599 (667)
                      ..  +..+.|+|+.+   |+||||||||||||||||+...   ++..++.|+.+||||.+|++ +||++.     ++.++
T Consensus       167 ~~~~~l~~nC~PL~~nedK~~YPcGLIaNSmfNDtf~~~l~~i~Dts~Y~lttkgIaW~sDr~-rykktk-----Yn~sd  240 (372)
T COG5035         167 LKSDDLKSNCKPLSYNEDKIIYPCGLIANSMFNDTFSSLLTGIEDTSNYNLTTKGIAWESDRH-RYKKTK-----YNASD  240 (372)
T ss_pred             cccccccccCCcccccCCCeeecccccccccccccchhhccccccccccccccCCccchhhcc-cccCCC-----CChhh
Confidence            76  33468999988   9999999999999999998865   25567999999999999998 799764     45678


Q ss_pred             CCCCcccccccccCCCCCCCCCCCCchhHHHHHhhCCCCchhheeeeeeccccCcCCCCCCeeEEec
Q psy10865        600 FAKPTDWKKNIWELDPENPDNNGFQNEDFIVWMRTAALPNFRKLYRRVNHEVEGYKSGLPAVKIKKK  666 (667)
Q Consensus       600 ~~~p~~w~~~~~~~~~~~~~~~g~~ne~fivWMr~aalp~FrKLyg~i~~~~~~~~~~L~~G~Y~i~  666 (667)
                      +|+||+|.+++-.--.++-.|+...||.|+||||+||||+|+||++|..      +++|++|+|+++
T Consensus       241 IvpPPnW~k~ypdGYtd~NiPDls~wE~Fq~WMrtAafP~F~KLa~~N~------~d~l~~G~Y~ln  301 (372)
T COG5035         241 IVPPPNWAKMYPDGYTDDNIPDLSTWEEFQNWMRTAAFPKFSKLAMRNV------NDVLPPGTYQLN  301 (372)
T ss_pred             cCCCCchHhhCCCCCCccCCCcchhHHHHHHHhhcccCchHHHHhcccc------cccCCCceEEEE
Confidence            9999999876411001122467889999999999999999999999966      379999999986

>PF03381 CDC50: LEM3 (ligand-effect modulator 3) family / CDC50 family; InterPro: IPR005045 Members of this family have no known function

Probab=100.00  E-value=1.4e-55  Score=458.26  Aligned_cols=204  Identities=43%  Similarity=0.785  Sum_probs=166.5

Q ss_pred             hhheeCceEEEEeecccccCCCCCCcchhhhhccCCCCCceeEEEEEeccccccceEEEEEecchhhhhhhhhcCCCccc
Q psy10865        443 LVYFADNVKELSLDYTHCLSVEQPDKTCAQIINNSRQMNCTCELQFALSEEIEGNVYIYYGLTNFYQNHRRYVKSRDDLQ  522 (667)
Q Consensus       443 ~~~~s~~v~E~~i~Y~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~f~i~~~m~~pvy~YY~L~nFyQNhrryv~S~s~~Q  522 (667)
                      |++++++|+|++++||++..... +     .........++|.++|+||++|++||||||+|+|||||||||++|||++|
T Consensus         1 ll~~s~~v~E~~~~Yd~~~~~~~-~-----~~~~~~~~~~~c~v~f~i~~~~~~pVyvYY~L~nFYQNhr~y~~S~~~~Q   74 (278)
T PF03381_consen    1 LLVASNSVVEIEIRYDDCCDCQN-C-----YINEFSPIPCTCSVTFNIPEDMKGPVYVYYELTNFYQNHRRYVKSRSDSQ   74 (278)
T ss_pred             CEEEeCCEEEEEEECCCCCCCCC-c-----cccccCCCCceEEEEEEcCccCCCCEEEEEEEehhhHHhHHHHhcCCHHH
Confidence            57899999999999999864322 1     11111223369999999999999999999999999999999999999999


Q ss_pred             ccCCCCC-CCCCCCCcccc------ccccccchhhhcccccceeecc---CCCceeccccccCCCcccccccCCCCCCCC
Q psy10865        523 LTATHSF-NLLQPCTLAMY------LSVAPCGAIANSLFSDSFKIFN---DKNKEVPVLRTGIAWPSDKAVKFHNPPGPD  592 (667)
Q Consensus       523 L~G~~~~-~~~~~C~P~~~------~~i~PCGliA~S~FNDtf~l~~---~~~~~~~~~~~gIaw~sD~~~kf~~p~~~~  592 (667)
                      |.|+..+ ...++|+|+.+      ++++||||||||||||||+|.+   .....++|+++||||++|++.+||+|..  
T Consensus        75 L~G~~~~~~~~~~C~p~~~~~~~~~~~~~PCGliA~S~FNDtF~l~~~~~~~~~~~~~~~~gIaw~~d~~~~fk~~~~--  152 (278)
T PF03381_consen   75 LKGKIVSKSDLSDCDPLRTNNENNGKIIYPCGLIANSMFNDTFSLYRRNSGNNENIPLDETGIAWSSDRESKFKNPHY--  152 (278)
T ss_pred             hCCCccccCCCCCCCCceeccCCCCCEeecccHhHhhhccceEEeeecccCCCceeeeecccccCchHHHHhcCCCCC--
Confidence            9999854 33579999976      7899999999999999999974   1456789999999999999889998752  


Q ss_pred             hhhhccCCCCCcccccccccCCCCCCCCCCCCchhHHHHHhhCCCCchhheeeeeeccccCcCCCCCCeeEEec
Q psy10865        593 LKEAFKNFAKPTDWKKNIWELDPENPDNNGFQNEDFIVWMRTAALPNFRKLYRRVNHEVEGYKSGLPAVKIKKK  666 (667)
Q Consensus       593 ~~~~~~~~~~p~~w~~~~~~~~~~~~~~~g~~ne~fivWMr~aalp~FrKLyg~i~~~~~~~~~~L~~G~Y~i~  666 (667)
                         ..++.++|++|.. .++.+  ...|+..+|||||||||+||||+||||||||+.      ++|++|+|+|+
T Consensus       153 ---~~~~~~~~~~W~~-~~~~~--~~~p~~~~ne~fivWMr~a~lp~FrKLYg~i~~------~~L~~G~y~i~  214 (278)
T PF03381_consen  153 ---NNSNTVPPPNWRP-GYEND--TPWPDNSENEHFIVWMRPAALPTFRKLYGRIDN------DDLPAGNYTID  214 (278)
T ss_pred             ---ccccccCCCceee-eccCC--CCCCcccccHHHHHHhccccCCCeeEeEeeecc------CCCCCceEEEE
Confidence               2335789999953 22222  223455589999999999999999999999942      39999999985

They have predicted transmembrane helices.; GO: 0016020 membrane

>TIGR00859 ENaC sodium channel transporter

Probab=100.00  E-value=8e-34  Score=323.91  Aligned_cols=297  Identities=14%  Similarity=0.150  Sum_probs=212.3

Q ss_pred             eeCCccccccccccCCccccCCcCeee--cCCceeeeeeeeecceeeecccccccccCCCCCCCCCCCCCCCCCcccCCC
Q psy10865         87 LTTPSLVLKPYRDLLPPAILNCANVCL--TRSALCAFIVTIRRGIVYWNVRRTLRLDWTLENDFPENAPVDSIPWRPWGA  164 (667)
Q Consensus        87 lh~p~~~p~~~~q~l~~a~~~C~~i~~--T~~G~Cc~FN~~~~~~~~~~~~~~~~~~W~~~~gY~~n~~~~~~P~r~~~~  164 (667)
                      +|..+.+-++..+++..+.+.|++|..  +++|.-|.       .  .++.  .......|+||+||.+...-.|++.++
T Consensus       201 ~~~~~~~~~~~~~~~~~~g~~~~dmi~~C~f~g~~C~-------~--~nFt--~~~T~~yG~CyTFN~~~~~~~~~~~~~  269 (595)
T TIGR00859       201 FHYINIFAQVPAEDKDRMGYQLEDFILTCRFDGESCD-------A--RNFT--HFHHPMYGNCYTFNSGENSNLLTSSMP  269 (595)
T ss_pred             cchhhhhhhcCHHHHHHhcCCHHHheeeeeECCeECC-------c--ccCe--EEEcCCCccEEeccCCCCCCcceecCC
Confidence            344344555677788899999999943  33443222       0  0110  111235899999999875556788899


Q ss_pred             CCCCceEEEEeccccccccCCCcCcceEEEeeCCCCCCccccCceeeCCCCeEEEEEEEEEeecCCcccccCCCCCcccC
Q psy10865        165 GRHLGLTVVLDANIEEYFCSSEASYGFKLLLQNPVETPKLAAFGELISPGRESLIVIKPIINKSNPSIATSDPELRQCLF  244 (667)
Q Consensus       165 G~~~GL~lvL~~~~~dy~~~~~~~~GfkV~IH~p~e~P~~~~~g~~v~pG~~t~i~V~p~~~~~~~~lr~l~p~~R~C~f  244 (667)
                      |..+||+|+|+++++||.+.....+||||+||+|+|+|++++.|+.|+||++++|+|++..+      +.++++||+|.+
T Consensus       270 G~~~GL~LvL~i~q~ey~p~~~~~aGfkV~IH~p~e~P~~~~~G~~V~PG~~T~I~i~~~~~------~~L~~p~~~C~~  343 (595)
T TIGR00859       270 GAENGLKLVLDIEQDEYLPLLSTEAGARVMVHSQDEPPFIDDLGFGVRPGTETSISMQEDEL------QRLGGPYGDCTE  343 (595)
T ss_pred             CccCceEEEEecchhhccccccCCCceEEEEeCCCCCCcccccceecCCCcEEEEEEEhhhh------hhcCCCCCCCcC
Confidence            99999999999999999876555899999999999999999999999999999999999875      447899999999


Q ss_pred             Cccc---cccccccccHHHHHHHHHHHHHhhcCCCccccCCCCCCCcCCCCCCcc-cHHHHHHHHHHHhhcccccccccc
Q psy10865        245 NKER---ALRFYRHYTQRNCILECEANFTLSFCQCVMYFMPKDRFTRICGKKDTD-CADKAKLAMEMRLSQNLSNISKIF  320 (667)
Q Consensus       245 ~~E~---~L~~f~~YS~~nC~~eC~~~~~~~~CgCvp~~~P~~~~~~~C~~~~l~-Cl~~~~~~~~~~~~~~~~ni~~~~  320 (667)
                      .++.   .+.|+..||++||+.||+++++++.|||++++||+..+.++|++.++. |+........ ..           
T Consensus       344 ~~~~l~~~~~y~~~YS~~nC~~eC~~~~~~~~CgC~~~~mP~~~~~~~C~~~~~~~c~~c~~~~~~-~~-----------  411 (595)
T TIGR00859       344 NGSDVPVENLYNSSYSIQACLRSCFQRYMVENCGCAYYHYPLPGGAEYCNYEQHPDWAYCYYKLYA-EF-----------  411 (595)
T ss_pred             CCCCCccccccCcccCHHHHHHHHHHHHHHhcCCCCCcCCCCCCCCCcCCccccccHHHHHHHHHH-Hh-----------
Confidence            7642   234566999999999999999999999999999988889999998864 3332222111 00           


Q ss_pred             cCCCCCCCCCCCCCCCceEEEeEEEeeecCCChhhhhcccc---ccC----HHHHhhcccccccCCCCCCCCCCCCcccc
Q psy10865        321 NDTTQKPNCGCLPGCFSLGYSKTQSSSTLAENPRIKKRYLA---GKS----LEYFRMASTSIVTESTPAVANHDEPDIVL  393 (667)
Q Consensus       321 ~~~~~~~~C~Clp~C~~~~Y~~~~S~s~lps~~~~~~~~~~---~~s----~~y~~~n~~~~~~~~~~~~~~~d~~~~~~  393 (667)
                      ........|.|+|+|+++.|.+++|++.||+...  .+|+.   +.+    .+|+|+|.+.+                  
T Consensus       412 ~~~~~~c~C~C~~~C~~~~Y~~~iS~a~~ps~~~--~~~l~~~~~~~~~~~~~~~r~n~~~l------------------  471 (595)
T TIGR00859       412 DQEELGCFSVCREPCNFTEYKLTLSMARWPSAAS--EDWLLHVLSRQNEYNITLIRNGIAKL------------------  471 (595)
T ss_pred             hhhcccccCCCCCCcCceeeeeEEEeccCcchhh--HHHHHHhhccchhhhhhhcccceEEE------------------
Confidence            0001123589999999999999999999998732  34442   222    24444443331                  


Q ss_pred             cccccccCCCcCCccccccCcceeeecc-CccchhHHHHHHHH
Q psy10865        394 NSNQKQNYKPKESAFNQQKLPAWQPILT-AGTVMPAFFTFGLF  435 (667)
Q Consensus       394 ~~~~~~~~~p~~t~f~QQ~L~aw~PilT-p~~v~~~~~~ig~i  435 (667)
                         ....+......++|.+.-.|--+|. -+..+.+|+-+++|
T Consensus       472 ---~Iyf~el~y~~i~q~~~y~~~~LLsdiGG~lGLfmG~SvL  511 (595)
T TIGR00859       472 ---NIFFEELNYRTIEESPAYNVVTLLSNLGGQMGLWMGASVL  511 (595)
T ss_pred             ---EEEeecceeEEEEEecccCHHHHHHHHHhHHHHHHhhHHH
Confidence               2334445566677777777765555 45555555544443

This model is designed from the vertebrate members of the ENaC family.

>TIGR00867 deg-1 degenerin

Probab=100.00  E-value=5.3e-33  Score=315.33  Aligned_cols=273  Identities=18%  Similarity=0.221  Sum_probs=204.2

Q ss_pred             ccccCCcCeee--cCCceeeeeeeeecceeeecccccccccCCCCCCCCCCCCCCCCCcccCCCCCCCceEEEEeccccc
Q psy10865        103 PAILNCANVCL--TRSALCAFIVTIRRGIVYWNVRRTLRLDWTLENDFPENAPVDSIPWRPWGAGRHLGLTVVLDANIEE  180 (667)
Q Consensus       103 ~a~~~C~~i~~--T~~G~Cc~FN~~~~~~~~~~~~~~~~~~W~~~~gY~~n~~~~~~P~r~~~~G~~~GL~lvL~~~~~d  180 (667)
                      .+.+.|++|..  +++|.-|.-.        .++.  ...+.++|+|||||.+.. ..+++.++|+.+||+|+|+++++|
T Consensus       301 ~lg~~~~Dmi~~C~f~G~~C~c~--------~nFt--~~~~~~yGnCyTFN~~~~-~~l~~~~~G~~~GL~LvLni~q~E  369 (601)
T TIGR00867       301 ALSYTKSELILKCSFNGKPCDID--------RDFT--LHIDPTFGNCYTFNYNRS-VNLTSSRAGPMYGLRLLLFVNQSD  369 (601)
T ss_pred             HhCCCHHHhhhcceECCeECCCc--------ccCc--EEecCCCCCeEEECCCCC-CcceeccCccCCceEEEEecchhh
Confidence            57888998843  5566644300        0110  012345899999998753 345667889999999999999999


Q ss_pred             cccCCCcCcceEEEeeCCCCCCccccCceeeCCCCeEEEEEEEEEeecCCcccccCCCCCcccCCcccccccc--ccccH
Q psy10865        181 YFCSSEASYGFKLLLQNPVETPKLAAFGELISPGRESLIVIKPIINKSNPSIATSDPELRQCLFNKERALRFY--RHYTQ  258 (667)
Q Consensus       181 y~~~~~~~~GfkV~IH~p~e~P~~~~~g~~v~pG~~t~i~V~p~~~~~~~~lr~l~p~~R~C~f~~E~~L~~f--~~YS~  258 (667)
                      |++.. ..+||||+||+|+|+|+++..|+.|+||++++|+|++..+.+      +++++|+|.+.+|..+.||  ..||+
T Consensus       370 Y~p~~-~~aGfKVlIH~p~E~P~pd~~G~~v~pG~~T~I~I~~~~~~~------Lp~pyg~C~~~~e~~~~~y~~~~YS~  442 (601)
T TIGR00867       370 YLPTT-EAAGVRLTVHDKDEFPFPDTFGYSAPTGFISSFGIKLKQMVR------LPAPYGDCVDTGKTSDYIYKGYAYSP  442 (601)
T ss_pred             ccCCC-CCCcEEEEEeCCCCCccccccceecCCCcEEEEEEeeeeeee------cCCCCCCcCCCCccccccCCCCcCCH
Confidence            99754 579999999999999999999999999999999999988876      6889999999988877777  69999


Q ss_pred             HHHHHHHHHHHHhhcCCCccccCCCCCCCcCCCCC---CcccHHHHHHHHHHHhhcccccccccccCCCCCCCCCCCCCC
Q psy10865        259 RNCILECEANFTLSFCQCVMYFMPKDRFTRICGKK---DTDCADKAKLAMEMRLSQNLSNISKIFNDTTQKPNCGCLPGC  335 (667)
Q Consensus       259 ~nC~~eC~~~~~~~~CgCvp~~~P~~~~~~~C~~~---~l~Cl~~~~~~~~~~~~~~~~ni~~~~~~~~~~~~C~Clp~C  335 (667)
                      +||++||+++++++.|||+++.||...+.++|++.   ++.|+.++...+...              ......|+|+|+|
T Consensus       443 ~nC~~EC~~~~vlk~CGC~~~~~P~~~~~~~C~~~~~~~~~Cl~~~~~~~~~~--------------~~~~~~C~C~~pC  508 (601)
T TIGR00867       443 EGCHRSCFQKLIIAKCGCGDPRFPVPEGSRHCQAFNKTDRECLENLTGDLGEL--------------HHKIFKCRCKQPC  508 (601)
T ss_pred             HHHHHHHHHHHHHhcCCCCCcCCcCCCCCCcCCCCccchhhHHHHHHHHhhhh--------------hccCCCCCCCCCc
Confidence            99999999999999999999999998888999964   579998776544210              0112579999999


Q ss_pred             CceEEEeEEEeeecCCChhhhhcccc-------ccCHHHHhhcccccccCCCCCCCCCCCCcccccccccccCCCcCCcc
Q psy10865        336 FSLGYSKTQSSSTLAENPRIKKRYLA-------GKSLEYFRMASTSIVTESTPAVANHDEPDIVLNSNQKQNYKPKESAF  408 (667)
Q Consensus       336 ~~~~Y~~~~S~s~lps~~~~~~~~~~-------~~s~~y~~~n~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~p~~t~f  408 (667)
                      +++.|.+++|++.||+....  ..+.       +...+|+|+|.+.+                     ....+......+
T Consensus       509 ~~~~Y~~~iS~a~~ps~s~~--~~l~~~~~~~~~~~~~~~r~N~~~l---------------------~Vyyeel~y~~i  565 (601)
T TIGR00867       509 QESIYTVTYSAAKWPSGSLY--IDLGSCDLNTASECNEYYRENAAMI---------------------EVFYEQLNYELL  565 (601)
T ss_pred             cccEEeeEeecccCcchhhh--hhhhcccccccchhhhhhccceEEE---------------------EEEeccceeEEE
Confidence            99999999999999976322  1111       12244555444331                     234555566777


Q ss_pred             ccccCcceeeecc-CccchhHHH
Q psy10865        409 NQQKLPAWQPILT-AGTVMPAFF  430 (667)
Q Consensus       409 ~QQ~L~aw~PilT-p~~v~~~~~  430 (667)
                      +|.+.-.|--+|. -+..+.+|+
T Consensus       566 ~q~~~y~~~~LLSdiGG~lGLfl  588 (601)
T TIGR00867       566 TESEAYGLVNLLADFGGQLGLWL  588 (601)
T ss_pred             EeecccCHHHHHHHhhhHHHHHH
Confidence            7777766654444 344444444

This model is designed from the invertebrate members of the ENaC family.

>PF00858 ASC: Amiloride-sensitive sodium channel; InterPro: IPR001873 The apical membrane of many tight epithelia contains sodium channels that are primarily characterised by their high affinity to the diuretic blocker amiloride [, , , ]

Probab=99.97  E-value=2.4e-31  Score=294.39  Aligned_cols=226  Identities=28%  Similarity=0.517  Sum_probs=155.1

Q ss_pred             Ccccc-CCcCe---eecCCceeeeeeeeecceeeecccccccccCCCCCCCCCCCCCCCCCcccCCCCCCCceEEEEecc
Q psy10865        102 PPAIL-NCANV---CLTRSALCAFIVTIRRGIVYWNVRRTLRLDWTLENDFPENAPVDSIPWRPWGAGRHLGLTVVLDAN  177 (667)
Q Consensus       102 ~~a~~-~C~~i---~~T~~G~Cc~FN~~~~~~~~~~~~~~~~~~W~~~~gY~~n~~~~~~P~r~~~~G~~~GL~lvL~~~  177 (667)
                      +.... .|..+   ..|+.|+||+||....                         +...+|+++..+|..+||+|+|+.+
T Consensus       153 ~~~~~~~c~~~~~~~~t~~G~C~tfn~~~~-------------------------~~~~~~~~~~~~g~~~gL~l~l~~~  207 (439)
T PF00858_consen  153 NGKPCDCCEDFFRFVHTEYGNCYTFNSLNS-------------------------DNNSYPLRQSRSGPGNGLSLVLNVN  207 (439)
T ss_dssp             TTEE---GGGEEEE-EETTEEEEEET-SS---------------------------SSSS--EE-SSSGGGSEEEEEE--
T ss_pred             cCCccccHHHhhhcccccCceeeeccCccc-------------------------ccccceeeeeccCcccccceeeccc
Confidence            34445 37776   3789999999987532                         2346788999999999999999999


Q ss_pred             cccccc--CCCcCcceEEEeeCCCCCCccccCceeeCCCCeEEEEEEEEEeecCCcccccCCCCCcccCCcccccccc-c
Q psy10865        178 IEEYFC--SSEASYGFKLLLQNPVETPKLAAFGELISPGRESLIVIKPIINKSNPSIATSDPELRQCLFNKERALRFY-R  254 (667)
Q Consensus       178 ~~dy~~--~~~~~~GfkV~IH~p~e~P~~~~~g~~v~pG~~t~i~V~p~~~~~~~~lr~l~p~~R~C~f~~E~~L~~f-~  254 (667)
                      ++||..  .....+||+|+||+|+++|.+++.|+.|+||.++.|+|++..+..      +++++|+|++++|..+.|+ .
T Consensus       208 ~~~~~~~~~~~~~~G~~v~ih~~~~~p~~~~~~~~v~~g~~~~i~v~~~~~~~------l~~~~r~C~~~~e~~l~~~~~  281 (439)
T PF00858_consen  208 QDDYLYDPGTTSSAGFKVYIHDPGEYPFIESNGISVPPGSETSISVKPTRISR------LPPPYRQCYFDDENNLYYFNS  281 (439)
T ss_dssp             GGGS----S--TSBSEEEEEE-TTS---HHHH-EEE-TTEEEEEEEEEEEEE---------TTTSSEB-SSSSBSSSS--
T ss_pred             ceeeecccccccchhheeecCCcccccchhccccccccceEEEEEeeccchhc------cCCCCCCCcCCcccccccccc
Confidence            999983  332236999999999999999999999999999999999998873      7899999999999988876 8


Q ss_pred             cccHHHHHHHHHHHHHhhcCCCccccCCCCCCCcCCCCCCc-ccHHHHHHHHHHHhhcccccccccccCCCCCCCCCCCC
Q psy10865        255 HYTQRNCILECEANFTLSFCQCVMYFMPKDRFTRICGKKDT-DCADKAKLAMEMRLSQNLSNISKIFNDTTQKPNCGCLP  333 (667)
Q Consensus       255 ~YS~~nC~~eC~~~~~~~~CgCvp~~~P~~~~~~~C~~~~l-~Cl~~~~~~~~~~~~~~~~ni~~~~~~~~~~~~C~Clp  333 (667)
                      .||+++|+.+|+++++++.|||++++| ...+.++|++.++ .|+.++...+..             ........|+|+|
T Consensus       282 ~Ys~~~C~~~C~~~~~~~~C~C~~~~~-~~~~~~~C~~~~~~~Cl~~~~~~~~~-------------~~~~~~~~C~C~~  347 (439)
T PF00858_consen  282 IYSYSNCLLECRQKYILKKCGCVPPFY-PNNNVPYCTLSDLLECLQKNYDKFNS-------------SWEEDGNSCDCLP  347 (439)
T ss_dssp             S--HHHHHHHHHHHHHHHHHSSB-TTS---SSS-B--HHHHHHTHHHHHHHHH----------------HT-SSSS---E
T ss_pred             ccChHHHHHHHHHHHHHHhCCCCCccc-cccCCCcCCchhhhhHHHHHHHHhhh-------------cccccccCCCCCC
Confidence            999999999999999999999999999 5556899999998 999988877631             0113457899999


Q ss_pred             CCCceEEEeEEEeeecCCChhhhhccc---cccCHHHHhhcccc
Q psy10865        334 GCFSLGYSKTQSSSTLAENPRIKKRYL---AGKSLEYFRMASTS  374 (667)
Q Consensus       334 ~C~~~~Y~~~~S~s~lps~~~~~~~~~---~~~s~~y~~~n~~~  374 (667)
                      +|+++.|.+++|++.||+....  .++   .+.+.++++++.+.
T Consensus       348 ~C~~~~Y~~~~s~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  389 (439)
T PF00858_consen  348 PCNETSYSVSVSYSSLPSKSFQ--KWLSNSFNKSEDYIRDNLAV  389 (439)
T ss_dssp             BSEEEEEEEEEEEEESS-CCCH--HHHHHHTT--HHHHHHHEEE
T ss_pred             chhhhcccccccccccccccch--hhhhccccccccccccchhh
Confidence            9999999999999999987322  222   15667777777765

These channels mediate the first step of active sodium reabsorption essential for the maintenance of body salt and water homeostasis []. In vertebrates, the channels control reabsorption of sodium in kidney, colon, lung and sweat glands; they also play a role in taste perception. Members of the epithelial Na+ channel (ENaC) family fall into four subfamilies, termed alpha, beta, gamma and delta []. The proteins exhibit the same apparent topology, each with two transmembrane (TM) spanning segments, separated by a large extracellular loop. In most ENaC proteins studied to date, the extracellular domains are highly conserved and contain numerous cysteine residues, with flanking C-terminal amphipathic TM regions, postulated to contribute to the formation of the hydrophilic pores of the oligomeric channel protein complexes. It is thought that the well-conserved extracellular domains serve as receptors to control the activities of the channels. Vertebrate ENaC proteins are similar to degenerins of Caenorhabditis elegans []: deg-1, del-1, mec-4, mec-10 and unc-8. These proteins can be mutated to cause neuronal degradation, and are also thought to form sodium channels. Structurally, the proteins that belong to this family consist of about 510 to 920 amino acid residues. They are made of an intracellular N terminus region followed by a transmembrane domain, a large extracellular loop, a second transmembrane segment and a C-terminal intracellular tail [].; GO: 0005272 sodium channel activity, 0006814 sodium ion transport, 0016020 membrane; PDB: 2QTS_B 3S3W_C 3IJ4_A 3S3X_A 3HGC_A 2K2B_A.

>KOG4294|consensus

Probab=99.95  E-value=3e-27  Score=268.44  Aligned_cols=284  Identities=23%  Similarity=0.345  Sum_probs=206.9

Q ss_pred             ccCCccccCCcCeee--cCCceeeeeeeeecceeeecccccccccCCCCCCCCCCCCCCCCCcccCCCCCCCceEEEEec
Q psy10865         99 DLLPPAILNCANVCL--TRSALCAFIVTIRRGIVYWNVRRTLRLDWTLENDFPENAPVDSIPWRPWGAGRHLGLTVVLDA  176 (667)
Q Consensus        99 q~l~~a~~~C~~i~~--T~~G~Cc~FN~~~~~~~~~~~~~~~~~~W~~~~gY~~n~~~~~~P~r~~~~G~~~GL~lvL~~  176 (667)
                      +++-.+.++|.++..  .++|..|. +-.....          ..-.+|+||++|...+...+....+|..+||+++|++
T Consensus       172 ~~~~~~~~~~~~~~~~C~f~g~~~~-~~~~~~~----------~~t~~G~C~tfN~~~~~~~~~~~~~g~~~GL~~~l~~  240 (520)
T KOG4294|consen  172 EFLMSLSYSCDDLILSCSFNGKPCD-CCKFFTP----------IFTEYGNCYTFNSSNKEGKYTSSRAGTGYGLRVMLDV  240 (520)
T ss_pred             HHHHHhCCCHHHHHHhCCcCCeeCC-chhccee----------ccCCCcceeEecCcCccccccccCCcccCceEEEEEc
Confidence            344466777777722  45555333 2111111          1234677888875444445556677889999999999


Q ss_pred             cccccccC-CCc-CcceEEEeeCCCCCCccccCceeeCCCCeEEEEEEEEEeecCCcccccCCC-CCcccCCcccc--cc
Q psy10865        177 NIEEYFCS-SEA-SYGFKLLLQNPVETPKLAAFGELISPGRESLIVIKPIINKSNPSIATSDPE-LRQCLFNKERA--LR  251 (667)
Q Consensus       177 ~~~dy~~~-~~~-~~GfkV~IH~p~e~P~~~~~g~~v~pG~~t~i~V~p~~~~~~~~lr~l~p~-~R~C~f~~E~~--L~  251 (667)
                      +++||.+. ... .+||+|+||.|.+.|++++.|+.+++|.++.++|++..+..      ++.+ ||+|.+.+|..  +.
T Consensus       241 ~~~~~~p~~~~~~~~g~~v~ih~~~~~p~~~~~~~~~~~~~~s~~~i~~~~~~~------l~~~~~g~C~~~~~~~~~~~  314 (520)
T KOG4294|consen  241 NQEEYLPGWTESDEAGVRVFIHSPDELPFIDSTGYSVPPGSESSVAVSPTKLTR------LPPPKWGNCLFSGEEVPELY  314 (520)
T ss_pred             cccccCCCccccccCceEEEeeCCCCCCCCCCcceecCCCceEEEEEeeeeeee------cCCCCCccccCCCCCCcccc
Confidence            99999994 432 38999999999999999999999999999999999999987      4555 99999998876  67


Q ss_pred             ccccccHHHHHHHHHHHHHhhcCCCccccCCCCCCCcCCCCCCcccHHHHHHHHHHHhhcccccccccccCCCCCCCCCC
Q psy10865        252 FYRHYTQRNCILECEANFTLSFCQCVMYFMPKDRFTRICGKKDTDCADKAKLAMEMRLSQNLSNISKIFNDTTQKPNCGC  331 (667)
Q Consensus       252 ~f~~YS~~nC~~eC~~~~~~~~CgCvp~~~P~~~~~~~C~~~~l~Cl~~~~~~~~~~~~~~~~ni~~~~~~~~~~~~C~C  331 (667)
                      ++..||.++|+.+|+++++++.|||+++.+|...+.++|++.++.|+.++.....               .......|.|
T Consensus       315 ~~~~Ys~~~C~~~C~~~~~~~~C~C~~~~~~~~~~~~~C~~~~~~C~~~~~~~~~---------------~~~~~~~c~C  379 (520)
T KOG4294|consen  315 YGRIYSLENCLLECRQKYLVKKCGCVPPLYPLPGNVPYCTLEDLLCLDLFLDSVG---------------SKSLNISCVC  379 (520)
T ss_pred             cCCCcCHHHHHHHHHHHHHHhcCCCCCccccCCCCCCcCCcchhhhhhhHHHhhc---------------CcCCCCCCCC
Confidence            7889999999999999999999999999999888999999999999998877531               1112223999


Q ss_pred             CCCCCceEEEeEEEeeecCCChhhhhcccc---ccCHHHHhhcccccccCCCCCCCCCCCCcccccccccccCCCcCCcc
Q psy10865        332 LPGCFSLGYSKTQSSSTLAENPRIKKRYLA---GKSLEYFRMASTSIVTESTPAVANHDEPDIVLNSNQKQNYKPKESAF  408 (667)
Q Consensus       332 lp~C~~~~Y~~~~S~s~lps~~~~~~~~~~---~~s~~y~~~n~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~p~~t~f  408 (667)
                      +++|++..|.+++|++.||+.......+..   +....|+++|.+.+.                     ...+......+
T Consensus       380 ~~~C~~~~y~~~~s~~~~ps~~~~~~~~~~~~~~~~~~~~~~n~~~v~---------------------i~~~~l~y~~~  438 (520)
T KOG4294|consen  380 PPPCNSTRYSVTLSMAKWPSFSSAVWLGLKPDKNSCEKYIRENRAMVN---------------------IFYEELNYESY  438 (520)
T ss_pred             CCCcccceeeeEeecccccccchhhhhhccCChHHHHHHHHhCceEEE---------------------EEhhhcCceee
Confidence            999999999999999999987544222222   223556655554422                     22333345556


Q ss_pred             ccccCcceeeecc-CccchhHHHHHHHH
Q psy10865        409 NQQKLPAWQPILT-AGTVMPAFFTFGLF  435 (667)
Q Consensus       409 ~QQ~L~aw~PilT-p~~v~~~~~~ig~i  435 (667)
                      +|...-.|.-+|+ -+..+.+|+.++++
T Consensus       439 ~~~~~~~~~~Lls~~GG~~GLf~G~Sv~  466 (520)
T KOG4294|consen  439 EQSKAYGFSDLLSDIGGQLGLFLGASVL  466 (520)
T ss_pred             ehhhhccHHHHHHHhcchhhhhhhhHHH
Confidence            7777767766666 55555555544443

>TIGR00867 deg-1 degenerin

Probab=97.32  E-value=0.00017  Score=83.42  Aligned_cols=51  Identities=22%  Similarity=0.232  Sum_probs=43.8

Q ss_pred             cCCCcCccccceEEEeccccceeccCCccccCceEEEeeCCccccccccccCC
Q psy10865         50 WRPWGAGRHLGLTVVLDANIEEYFCSSEASYGFKSIVLTTPSLVLKPYRDLLP  102 (667)
Q Consensus        50 ~r~~~~G~~~gl~~~l~~~~~dy~c~~~~~~Gfk~v~lh~p~~~p~~~~q~l~  102 (667)
                      .+..++|...||.|+|+++.+||+|++.. +||| |+||.|+|+|.+..+.+.
T Consensus       348 l~~~~~G~~~GL~LvLni~q~EY~p~~~~-aGfK-VlIH~p~E~P~pd~~G~~  398 (601)
T TIGR00867       348 LTSSRAGPMYGLRLLLFVNQSDYLPTTEA-AGVR-LTVHDKDEFPFPDTFGYS  398 (601)
T ss_pred             ceeccCccCCceEEEEecchhhccCCCCC-CcEE-EEEeCCCCCcccccccee
Confidence            44457899999999999999999998764 9999 999999999998776544

This model is designed from the invertebrate members of the ENaC family.

>TIGR00859 ENaC sodium channel transporter

Probab=97.21  E-value=0.00029  Score=81.68  Aligned_cols=67  Identities=18%  Similarity=0.111  Sum_probs=51.6

Q ss_pred             CCCCCC--CCCCCCCCCCccCCCcCccccceEEEeccccceec--cCCccccCceEEEeeCCccccccccccCC
Q psy10865         33 WTLEND--FPENAPVDSIPWRPWGAGRHLGLTVVLDANIEEYF--CSSEASYGFKSIVLTTPSLVLKPYRDLLP  102 (667)
Q Consensus        33 W~~e~G--Y~~~~~~~~yP~r~~~~G~~~gl~~~l~~~~~dy~--c~~~~~~Gfk~v~lh~p~~~p~~~~q~l~  102 (667)
                      ||++.|  |.-+.+...-.+++.++|..+||.|+|+.+.+||.  |++  ..||| |+||.|+|+|.+..+.+.
T Consensus       245 ~T~~yG~CyTFN~~~~~~~~~~~~~G~~~GL~LvL~i~q~ey~p~~~~--~aGfk-V~IH~p~e~P~~~~~G~~  315 (595)
T TIGR00859       245 HHPMYGNCYTFNSGENSNLLTSSMPGAENGLKLVLDIEQDEYLPLLST--EAGAR-VMVHSQDEPPFIDDLGFG  315 (595)
T ss_pred             EcCCCccEEeccCCCCCCcceecCCCccCceEEEEecchhhccccccC--CCceE-EEEeCCCCCCccccccee
Confidence            444544  44444443334678899999999999999999776  655  39999 999999999999887765

This model is designed from the vertebrate members of the ENaC family.

>PF00858 ASC: Amiloride-sensitive sodium channel; InterPro: IPR001873 The apical membrane of many tight epithelia contains sodium channels that are primarily characterised by their high affinity to the diuretic blocker amiloride [, , , ]

Probab=96.07  E-value=0.0037  Score=69.32  Aligned_cols=55  Identities=27%  Similarity=0.409  Sum_probs=36.2

Q ss_pred             CCCCCccCCCcCccccceEEEeccccceec--cCCccccCceEEEeeCCccccccccc
Q psy10865         44 PVDSIPWRPWGAGRHLGLTVVLDANIEEYF--CSSEASYGFKSIVLTTPSLVLKPYRD   99 (667)
Q Consensus        44 ~~~~yP~r~~~~G~~~gl~~~l~~~~~dy~--c~~~~~~Gfk~v~lh~p~~~p~~~~q   99 (667)
                      +...+|++..++|...||.|+|+.+..||.  +......||| |++|.|.++|.+..+
T Consensus       183 ~~~~~~~~~~~~g~~~gL~l~l~~~~~~~~~~~~~~~~~G~~-v~ih~~~~~p~~~~~  239 (439)
T PF00858_consen  183 DNNSYPLRQSRSGPGNGLSLVLNVNQDDYLYDPGTTSSAGFK-VYIHDPGEYPFIESN  239 (439)
T ss_dssp             -SSSS--EE-SSSGGGSEEEEEE--GGGS----S--TSBSEE-EEEE-TTS---HHHH
T ss_pred             ccccceeeeeccCcccccceeecccceeeecccccccchhhe-eecCCcccccchhcc
Confidence            457899999999999999999999999888  7665425999 999999999998775

These channels mediate the first step of active sodium reabsorption essential for the maintenance of body salt and water homeostasis []. In vertebrates, the channels control reabsorption of sodium in kidney, colon, lung and sweat glands; they also play a role in taste perception. Members of the epithelial Na+ channel (ENaC) family fall into four subfamilies, termed alpha, beta, gamma and delta []. The proteins exhibit the same apparent topology, each with two transmembrane (TM) spanning segments, separated by a large extracellular loop. In most ENaC proteins studied to date, the extracellular domains are highly conserved and contain numerous cysteine residues, with flanking C-terminal amphipathic TM regions, postulated to contribute to the formation of the hydrophilic pores of the oligomeric channel protein complexes. It is thought that the well-conserved extracellular domains serve as receptors to control the activities of the channels. Vertebrate ENaC proteins are similar to degenerins of Caenorhabditis elegans []: deg-1, del-1, mec-4, mec-10 and unc-8. These proteins can be mutated to cause neuronal degradation, and are also thought to form sodium channels. Structurally, the proteins that belong to this family consist of about 510 to 920 amino acid residues. They are made of an intracellular N terminus region followed by a transmembrane domain, a large extracellular loop, a second transmembrane segment and a C-terminal intracellular tail [].; GO: 0005272 sodium channel activity, 0006814 sodium ion transport, 0016020 membrane; PDB: 2QTS_B 3S3W_C 3IJ4_A 3S3X_A 3HGC_A 2K2B_A.

>KOG4294|consensus

Probab=81.79  E-value=1.6  Score=49.93  Aligned_cols=52  Identities=27%  Similarity=0.319  Sum_probs=41.0

Q ss_pred             CCCCCccCCCcCccccceEEEeccccceeccCCccc--cCceEEEeeCCcccccccc
Q psy10865         44 PVDSIPWRPWGAGRHLGLTVVLDANIEEYFCSSEAS--YGFKSIVLTTPSLVLKPYR   98 (667)
Q Consensus        44 ~~~~yP~r~~~~G~~~gl~~~l~~~~~dy~c~~~~~--~Gfk~v~lh~p~~~p~~~~   98 (667)
                      ....|+.+  .+|...||.++|+...+||.-..+.+  .||| |++|.|+++|.+..
T Consensus       219 ~~~~~~~~--~~g~~~GL~~~l~~~~~~~~p~~~~~~~~g~~-v~ih~~~~~p~~~~  272 (520)
T KOG4294|consen  219 KEGKYTSS--RAGTGYGLRVMLDVNQEEYLPGWTESDEAGVR-VFIHSPDELPFIDS  272 (520)
T ss_pred             cccccccc--CCcccCceEEEEEccccccCCCccccccCceE-EEeeCCCCCCCCCC
Confidence            34556666  55558999999999999999843323  7999 99999999999764

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	667
2qts_A	438	Acid-sensing ION channel; trimer, membrane protein	2e-18
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-05

>2qts_A Acid-sensing ION channel; trimer, membrane protein; HET: MAL NAG; 1.90A {Gallus gallus} PDB: 3hgc_A 3ij4_A Length = 438

 Score = 87.5 bits (215), Expect = 2e-18
 Identities = 34/198 (17%), Positives = 56/198 (28%), Gaps = 30/198 (15%)

Query: 158 PWRPWGAGRHLGLTVVLDANIEEYFC------SSEASYGFKLLLQNPVETPKLAAFGELI 211
                  G   GL ++LD   +EY         +    G K+ + +  E P +   G  +
Sbjct: 182 RLITMKGGTGNGLEIMLDIQQDEYLPVWGETDETSFEAGIKVQIHSQDEPPLIDQLGFGV 241

Query: 212 SPGRESLIVIKPIINKSNPSIATSDPELRQCLFNKERALRFYRHYTQRNCILECEANFTL 271
           +PG ++ +  +       P                     FY  Y+   C ++CE  + +
Sbjct: 242 APGFQTFVSCQEQRLIYLPPP-------WGDCKATTGDSEFYDTYSITACRIDCETRYLV 294

Query: 272 SFCQCVMYFMPKDRFTRICGKKDTDCADKAKLAMEMRLSQNLSNISKIFNDTTQKPNCGC 331
             C C M  MP D       +            +E                      C C
Sbjct: 295 ENCNCRMVHMPGDAPYCTPEQYKECADPALDFLVEK-----------------DNEYCVC 337

Query: 332 LPGCFSLGYSKTQSSSTL 349
              C    Y K  S   +
Sbjct: 338 EMPCNVTRYGKELSMVKI 355

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 51.0 bits (121), Expect = 1e-06
 Identities = 87/617 (14%), Positives = 170/617 (27%), Gaps = 189/617 (30%)

Query: 97  YRDLLP---PAI---LNCANVC-LTRSAL----CAFIVTIRRGIVYWNVRRTLRLDWTLE 145
           Y+D+L     A     +C +V  + +S L       I+  +       V  TLRL WTL 
Sbjct: 18  YKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKD-----AVSGTLRLFWTLL 72

Query: 146 NDFPENAPVDSIPWRPWGAGRHLGLTVVLDANIEEYFCSS-EASYGFKLLLQNPVET--- 201
               E                           ++++       +Y F   L +P++T   
Sbjct: 73  -SKQEEM-------------------------VQKFVEEVLRINYKF---LMSPIKTEQR 103

Query: 202 -PKLAAFGELISPGRESLIVIKPIINKSNPSIATSDPELRQCLFNKERALRFYRH----- 255
            P +     +    R+ L     +  K N S      +LRQ L     A           
Sbjct: 104 QPSMMT--RMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGS 161

Query: 256 -------YTQRNCILECEANF-----TLSFCQCVMYFMPKDRFTRICGKKDTDCADKAKL 303
                      +  ++C+ +F      L  C      +  +   ++  + D +   ++  
Sbjct: 162 GKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVL--EMLQKLLYQIDPNWTSRSDH 219

Query: 304 AMEMRLSQNL--SNISKIFNDTTQKPNCGCL----------------PGCFSLGYSKTQS 345
           +  ++L  +   + + ++      KP   CL                  C  L  ++ + 
Sbjct: 220 SSNIKLRIHSIQAELRRLL---KSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQ 276

Query: 346 SSTLAENPRIKKRYL--------AGKSLEYFRMASTSIVTESTPAVAN------------ 385
            +            L          +              +  P                
Sbjct: 277 VTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKY-LDCRPQDLPREVLTTNPRRLSIIAE 335

Query: 386 --HDEPDIVLNSNQKQNYKPK---ESAFNQQKLPAWQPILTAGTVMPAFFTFGLF----F 436
              D      N       K     ES+ N          L        F    +F     
Sbjct: 336 SIRDGLATWDNWKHVNCDKLTTIIESSLNV---------LEPAEYRKMFDRLSVFPPSAH 386

Query: 437 IPIGVGLVYFADNVKE-----LSLDYTHCLSVEQPDKTCAQIINNSRQMNCTCELQFALS 491
           IP  +  + + D +K      ++  + + L  +QP ++   I +          +   L 
Sbjct: 387 IPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPS----------IYLELK 436

Query: 492 EEIEGNVYIYYGLTNFYQNHRRYVKSRDDLQLTAT----HSFNLLQPCTLAMYLSVAPCG 547
            ++E    ++  + + Y   + +    DDL         +S        +  +L      
Sbjct: 437 VKLENEYALHRSIVDHYNIPKTF--DSDDLIPPYLDQYFYSH-------IGHHLK----- 482

Query: 548 AIANSLFSDSF-KIFND----KNKEVPVLRTGIAWPSDKAVKFHNPPGP--DLKEAFKNF 600
            I +      F  +F D    + K   +     AW         N  G   +  +  K +
Sbjct: 483 NIEHPERMTLFRMVFLDFRFLEQK---IRHDSTAW---------NASGSILNTLQQLKFY 530

Query: 601 AKPTDWKKNIWELDPEN 617
                 K  I + DP+ 
Sbjct: 531 ------KPYICDNDPKY 541

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 46.4 bits (109), Expect = 3e-05
 Identities = 72/519 (13%), Positives = 132/519 (25%), Gaps = 167/519 (32%)

Query: 54  GAGRH-LGLTVVLDANIEEYFCSSEASYGFKSIVLT-----TPSLVLKP----YRDLLPP 103
           G+G+  + L V L   ++           FK   L      +P  VL+        + P 
Sbjct: 160 GSGKTWVALDVCLSYKVQCKM-------DFKIFWLNLKNCNSPETVLEMLQKLLYQIDPN 212

Query: 104 AILNCANVCLTRSALCAFIVTIRRGIVYWNVRRTLR-LD--WTLENDFPENAPVDSIPWR 160
                 +    +  + +    +RR +        L  L                ++  W 
Sbjct: 213 WTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQ------------NAKAWN 260

Query: 161 PWGAG-------RHLGLTVVLDANIEEYFCSSEASYGF------KLLLQN--------PV 199
            +          R   +T  L A    +      S          LLL+         P 
Sbjct: 261 AFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPR 320

Query: 200 ETPK-----LAAFGELISPGRESL-----IVIKPIINKSNPSIATSDP-ELRQC-----L 243
           E        L+   E I  G  +      +    +      S+   +P E R+      +
Sbjct: 321 EVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSV 380

Query: 244 FNK-----ERALRFYRHYTQRNCILECEANFT---LSFCQCVMYFM-PKDRFTRICGKKD 294
           F          L           ++  +   +   +   +   Y +  K           
Sbjct: 381 FPPSAHIPTILL----------SLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPS 430

Query: 295 TDCADKAKLAMEMRLSQNLSNISKIFNDTTQKPNCGCLPGC-----FS-LGY--SKTQSS 346
                K KL  E  L +++  +   +N      +   +P       +S +G+     +  
Sbjct: 431 IYLELKVKLENEYALHRSI--VDH-YNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHP 487

Query: 347 STLAENPRIKKRYLAGKSLEYFRMASTSIVTESTPAVANHDEPDIVLNSNQKQNYKPKES 406
             +     +   +L       FR     I  +ST   A+    + +    Q + YKP   
Sbjct: 488 ERMTLFRMV---FLD------FRFLEQKIRHDSTAWNASGSILNTL---QQLKFYKP--- 532

Query: 407 AFNQQKLPAWQPILTAGTVMPAFFTFGLFFIPIGVGLVYFADN---VKELSLDYTHCLSV 463
                                                 Y  DN    + L       L  
Sbjct: 533 --------------------------------------YICDNDPKYERLVNAILDFL-- 552

Query: 464 EQPDKTCAQIINNSRQMNCTCELQFALSEEIEGNVYIYY 502
                   + +  S+    T  L+ AL  E E    I+ 
Sbjct: 553 ----PKIEENLICSK---YTDLLRIALMAEDEA---IFE 581

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	667
2qts_A	438	Acid-sensing ION channel; trimer, membrane protein	100.0
2qts_A	438	Acid-sensing ION channel; trimer, membrane protein	97.27

>2qts_A Acid-sensing ION channel; trimer, membrane protein; HET: MAL NAG; 1.90A {Gallus gallus} PDB: 3hgc_A 3ij4_A

Probab=100.00  E-value=2.2e-34  Score=318.51  Aligned_cols=191  Identities=23%  Similarity=0.399  Sum_probs=163.6

Q ss_pred             CCcccCCCCCCCceEEEEeccccccccCCCc------CcceEEEeeCCCCCCccccCceeeCCCCeEEEEEEEEEeecCC
Q psy10865        157 IPWRPWGAGRHLGLTVVLDANIEEYFCSSEA------SYGFKLLLQNPVETPKLAAFGELISPGRESLIVIKPIINKSNP  230 (667)
Q Consensus       157 ~P~r~~~~G~~~GL~lvL~~~~~dy~~~~~~------~~GfkV~IH~p~e~P~~~~~g~~v~pG~~t~i~V~p~~~~~~~  230 (667)
                      .|+++..+|..+||+|+|+++++||.+....      .+||+|+||+|.|+|+++..|+.|+||.+++|+|++..+.   
T Consensus       181 ~~~~~~~~G~~~GL~l~L~~~~~~y~~~~~~~~~~~~~~G~~v~iH~~~e~P~~~~~g~~v~~g~~t~v~v~~~~~~---  257 (438)
T 2qts_A          181 PRLITMKGGTGNGLEIMLDIQQDEYLPVWGETDETSFEAGIKVQIHSQDEPPLIDQLGFGVAPGFQTFVSCQEQRLI---  257 (438)
T ss_dssp             SCCEECSSSGGGSEEEEEECCGGGCCCCCSCCTTCCSCBSEEEEEECTTSCCCHHHHCEEECTTEEEEEEEEEEEEE---
T ss_pred             ccceecCCccCCCceEEEEcccccccccccccccccccCceEEEECCCCCCCcccccceecCCCCEEEEEEEEEEee---
Confidence            3577888999999999999999999975332      3999999999999999999999999999999999987654   


Q ss_pred             cccccCCCCCcccCCccccccccccccHHHHHHHHHHHHHhhcCCCccccCCCCCCCcCCCCCCc-ccHHHHHHHHHHHh
Q psy10865        231 SIATSDPELRQCLFNKERALRFYRHYTQRNCILECEANFTLSFCQCVMYFMPKDRFTRICGKKDT-DCADKAKLAMEMRL  309 (667)
Q Consensus       231 ~lr~l~p~~R~C~f~~E~~L~~f~~YS~~nC~~eC~~~~~~~~CgCvp~~~P~~~~~~~C~~~~l-~Cl~~~~~~~~~~~  309 (667)
                         .+++++|+|+|++| .++||+.||+++|+.||+++++++.|||++++||+  +.++|++.++ .|+.++...+..  
T Consensus       258 ---~l~~~~r~C~~~~~-~l~~~~~Ys~~~C~~eC~~~~~~~~CgC~~~~~P~--~~~~C~~~~~~~C~~~~~~~~~~--  329 (438)
T 2qts_A          258 ---YLPPPWGDCKATTG-DSEFYDTYSITACRIDCETRYLVENCNCRMVHMPG--DAPYCTPEQYKECADPALDFLVE--  329 (438)
T ss_dssp             ---CCCTTTCCCBCCCS-CCSSCSSCCHHHHHHHHHHHHHHHHHSSBCTTCCS--SSCBCCHHHHHHTHHHHHHHHHH--
T ss_pred             ---ccCCCcCCCcCCCC-CCcccCCCCHHHHHHHHHHHHHHhcCCCEeeCCCC--CCCCCChHHHHHHHHHHHHHHhc--
Confidence               48899999999876 58899999999999999999999999999999997  5799999985 699988765521  


Q ss_pred             hcccccccccccCCCCCCCCCCCCCCCceEEEeEEEeeecCCChhhhhcccc---ccCHHHHhhcccc
Q psy10865        310 SQNLSNISKIFNDTTQKPNCGCLPGCFSLGYSKTQSSSTLAENPRIKKRYLA---GKSLEYFRMASTS  374 (667)
Q Consensus       310 ~~~~~ni~~~~~~~~~~~~C~Clp~C~~~~Y~~~~S~s~lps~~~~~~~~~~---~~s~~y~~~n~~~  374 (667)
                                    .....|+|+|+|+++.|.+++|+++||+...  .+++.   +.+.+|+++|.+.
T Consensus       330 --------------~~~~~C~C~~~C~~~~Y~~~~s~~~~~~~~~--~~~~~~~~~~~~~~~~~n~~~  381 (438)
T 2qts_A          330 --------------KDNEYCVCEMPCNVTRYGKELSMVKIPSKAS--AKYLAKKYNKSEQYIGENILV  381 (438)
T ss_dssp             --------------TCSSSSCCCCBSEEEEEEEEEEEEESSCTTT--HHHHHHHHTCCHHHHHHHEEE
T ss_pred             --------------CCCCCCCCCCcccceeeeeEEEEeeCCchHH--HHHHHHhcCcchhhHhhcEEE
Confidence                          2346799999999999999999999998632  34432   5788888877654

>2qts_A Acid-sensing ION channel; trimer, membrane protein; HET: MAL NAG; 1.90A {Gallus gallus} PDB: 3hgc_A 3ij4_A

Probab=97.27  E-value=0.00011  Score=80.59  Aligned_cols=54  Identities=17%  Similarity=0.129  Sum_probs=46.1

Q ss_pred             CCccCCCcCccccceEEEeccccceeccCCccc------cCceEEEeeCCccccccccccC
Q psy10865         47 SIPWRPWGAGRHLGLTVVLDANIEEYFCSSEAS------YGFKSIVLTTPSLVLKPYRDLL  101 (667)
Q Consensus        47 ~yP~r~~~~G~~~gl~~~l~~~~~dy~c~~~~~------~Gfk~v~lh~p~~~p~~~~q~l  101 (667)
                      ..|+|+.++|...||.|+|+.+.+||+|....+      +||| |+||+|+|+|.+..+.+
T Consensus       180 ~~~~~~~~~G~~~GL~l~L~~~~~~y~~~~~~~~~~~~~~G~~-v~iH~~~e~P~~~~~g~  239 (438)
T 2qts_A          180 KPRLITMKGGTGNGLEIMLDIQQDEYLPVWGETDETSFEAGIK-VQIHSQDEPPLIDQLGF  239 (438)
T ss_dssp             SSCCEECSSSGGGSEEEEEECCGGGCCCCCSCCTTCCSCBSEE-EEEECTTSCCCHHHHCE
T ss_pred             CccceecCCccCCCceEEEEcccccccccccccccccccCceE-EEECCCCCCCcccccce
Confidence            456889999999999999999999999864322      9999 99999999999877553

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00