Psyllid ID: psy10879

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-----
Protein Sequence
DNISANQTGLSKFKNLKHSYFIVILILTSSKNYIRRKNIRDTWIKNIEKYQVKYLFSIGNKENVVDVKLKEEIRRYDDILLLNQVPDEYSSLSQKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGFFDGRARVRRAGKWKEKNWFLCDRYLPYALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRYHDVRFDTEFQSRGCNNSYLIVHKQNMHQL
Secondary Structure (PSIPRED)
cccccccccccccccccccEEEEEEEEcccccHHHHHHHHHHHHcccccccEEEEEEEEccccHHHHHHHHHHHHcccEEcccccccccccHHHHHHHHHHHHHHcccEEEEEEccccEEEEHHHHHHHHHcccccccEEEEEEEEccccccccccEEEccccccccccccccccEEEEcHHHHHHHHHHccccccccccHHHHHHHHHHcccccccccccccccccccccccEEEEcccccccc
Secondary Structure Prediction (SSPRO)
cccccccHHccccccccccEEEEEEEEcccccHHHHHHHHHHHHHHcccccEEEEEEEEcccHHHHHHHHHHHHHHccEEEcHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccEEEcHHHHHHHHHHcccccccEEEEEEccccccccccEEEEccccccccccccccccEEEEcHHHHHHHHHHccHcccccHHHHHHHHHHHHcccccccccccccccccccccccEEEEEccccccc
Coil and Loop (DISEMBL)
dnisanqtglskfknlkHSYFIVILILTSSKNYIRRKNIRDTWIKNIEKYQVKYLFSIgnkenvvdvKLKEEIRRYDDILllnqvpdeysSLSQKVLHSFKYIYEHFDFqyllkcdddtfvrvpnIIHELENKFHYEKKLYWGFFDGRARVRRAGkwkeknwflcdrylpyalgggYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSalditryhdvrfdtefqsrgcnnSYLIVHKQNMHQL
Flexible Loop (DISEMBL)
dnisanqtglskfknlkhsYFIVILIltssknyirrKNIRDTWIKNIEKYQVKYlfsignkenvvdVKLKEEIRRYDDILLLNQVPDEYSSLSQKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGFFDGRARVRRagkwkeknwfLCDRYLPYALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRYHDVRFDTefqsrgcnNSYLIVHKQNMHQL
Low Complexity Region (SEG)
DNISANQTGLSKFKNLKHSYFIVILILTSSKNYIRRKNIRDTWIKNIEKYQVKYLFSIGNKENVVDVKLKEEIRRYDDILLLNQVPDEYSSLSQKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGFFDGRARVRRAGKWKEKNWFLCDRYLPYALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRYHDVRFDTEFQSRGCNNSYLIVHKQNMHQL
Disordered region (IsUnstruct)
***********KFKNLKHSYFIVILILTSSKNYIRRKNIRDTWIKNIEKYQVKYLFSIGNKENVVDVKLKEEIRRYDDILLLNQVPDEYSSLSQKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGFFDGRARVRRAGKWKEKNWFLCDRYLPYALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRYHDVRFDTEFQSRGCNNSYLIVH*******
Disordered Region (DISOPRED)
********************FIVILILTSSKNYIRRKNIRDTWIKNIEKYQVKYLFSIGNKENV***KLKEEIRRYDDILLLNQVPDEYSSLSQKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGFFDGRARVRRAGKWKEKNWFLCDRYLPYALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRYHDVRFDTEFQSRGCNNSYLIVHKQ*****
Disordered Region (DISEMBL)
********GLSKFKNLKHSYFIVILILTSSKNYIRRKNIRDTWIKNIEKYQVKYLFSIGNKENVVDVKLKEEIRRYDDILLLNQVPDEYSSLSQKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGFFDGRARVRRAGKWKEKNWFLCDRYLPYALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRYHDVRFDTEFQSRGCNNSYLIVHKQNMHQL
Disordered Region (DISPRO)
*****NQTGLSKFKNLKHSYFIVILILTSSKNYIRRKNIRDTWIKNIEKYQVKYLFSIGNKENVVDVKLKEEIRRYDDILLLNQVPDEYSSLSQKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGFFDGRARVRRAGKWKEKNWFLCDRYLPYALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRYHDVRFDTEFQSRGCNNSYLIVHKQNM***
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
DNISANQTGLSKFKNLKHSYFIVILILTSSKNYIRRKNIRDTWIKNIEKYQVKYLFSIGNKENVVDVKLKEEIRRYDDILLLNQVPDEYSSLSQKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGFFDGRARVRRAGKWKEKNWFLCDRYLPYALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRYHDVRFDTEFQSRGCNNSYLIVHKQNMHQL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	245	2.2.26 [Sep-21-2011]
Q91Z92	325	Beta-1,3-galactosyltransf	yes	N/A	0.959	0.723	0.394	1e-49
Q9N491	330	Beta-1,3-galactosyltransf	yes	N/A	0.975	0.724	0.430	3e-49
Q96L58	329	Beta-1,3-galactosyltransf	yes	N/A	0.889	0.662	0.423	2e-48
Q5M900	488	UDP-GalNAc:beta-1,3-N-ace	no	N/A	0.616	0.309	0.359	2e-23
Q6NRQ1	486	UDP-GalNAc:beta-1,3-N-ace	N/A	N/A	0.640	0.323	0.352	4e-23
Q502B3	491	UDP-GalNAc:beta-1,3-N-ace	no	N/A	0.616	0.307	0.346	6e-21
Q8RX55	672	Probable beta-1,3-galacto	yes	N/A	0.893	0.325	0.320	3e-20
A7XDQ9	684	Probable beta-1,3-galacto	no	N/A	0.938	0.336	0.303	5e-20
Q8GXG6	673	Probable beta-1,3-galacto	no	N/A	0.902	0.328	0.307	1e-19
Q9LV16	681	Probable beta-1,3-galacto	no	N/A	0.897	0.323	0.291	6e-18

>sp|Q91Z92|B3GT6_MOUSE Beta-1,3-galactosyltransferase 6 OS=Mus musculus GN=B3galt6 PE=2 SV=1

 Score =  196 bits (498), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 95/241 (39%), Positives = 143/241 (59%), Gaps = 6/241 (2%)

Query: 11  SKFKNLKHSYFIVILILTSSKNYIRRKNIRDTWIK-----NIEKYQVKYLFSIGNKENVV 65
           S     +   F+ +L+ ++ +   RR  +R TW+        E    ++    G   +  
Sbjct: 42  SGAARPRAKAFLAVLVASAPRAVERRTAVRSTWLAPERRGGPEDVWARFAVGTGGLGSEE 101

Query: 66  DVKLKEEIRRYDDILLLNQVPDEYSSLSQKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPN 125
              L+ E  ++ D+LLL  + D Y +L+ KVL    ++ E  DF+++LK DDD+F R+  
Sbjct: 102 RRALELEQAQHGDLLLLPALRDAYENLTAKVLAMLTWLDERVDFEFVLKADDDSFARLDA 161

Query: 126 IIHELENKFHYEKK-LYWGFFDGRARVRRAGKWKEKNWFLCDRYLPYALGGGYVLSHLLV 184
           I+ +L  +    ++ LYWGFF GR RV+  G+W+E  W LCD YLPYALGGGYVLS  LV
Sbjct: 162 ILVDLRAREPARRRRLYWGFFSGRGRVKPGGRWREAAWQLCDYYLPYALGGGYVLSADLV 221

Query: 185 KFISENSHMLSSYISEDVSVGVWLSALDITRYHDVRFDTEFQSRGCNNSYLIVHKQNMHQ 244
            ++  +   L ++ SEDVS+G WL+ +D+ R HD RFDTE++SRGCNN YL+ HKQ+   
Sbjct: 222 HYLRLSREYLRAWHSEDVSLGTWLAPVDVQREHDPRFDTEYKSRGCNNQYLVTHKQSPED 281

Query: 245 L 245
           +
Sbjct: 282 M 282

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal beta-linked galactose residue. Has a preference for galactose-beta-1,4-xylose that is found in the linker region of glycosaminoglycans, such as heparan sulfate and chondroitin sulfate. Has no activity towards substrates with terminal glucosamine or galactosamine residues.
Mus musculus (taxid: 10090)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 3EC: 4

>sp|Q9N491|SQV2_CAEEL Beta-1,3-galactosyltransferase sqv-2 OS=Caenorhabditis elegans GN=sqv-2 PE=2 SV=1

 Score =  194 bits (494), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 106/246 (43%), Positives = 151/246 (61%), Gaps = 7/246 (2%)

Query: 4   SANQTGLSKFKNLKHSYFIVILILTSSKNYIRRKNIRDTWIKNIEKYQVKYL--FSIGNK 61
            +N   +S   NL  + F+ I ILTS     RR+N+RDTW +   K    ++  F++G  
Sbjct: 43  GSNAPLISSPTNLPET-FLYISILTSPNETERRQNVRDTWFRLSTKGPSVFIAKFAVGTM 101

Query: 62  ENVVDVK--LKEEIRRYDDILLLNQVPDEYSSLSQKVLHSFKYIYEHFDFQYLLKCDDDT 119
               + +  L EE  ++ D+ LL++  + Y  L++K L  F + + +F F++ LK D D+
Sbjct: 102 GLAAEDRRLLAEENEKFGDLALLDRHEESYERLAKKTLACFVHAFANFKFKFFLKTDIDS 161

Query: 120 FVRVPNIIHELENKFHYEKKLYWGFFDGRARVRRAGKWKEKNWFLCDRYLPYALGGGYVL 179
           FVR+  +I  L  K   +  LYWGF DGRA+  R GKWKE  W LCDRYLPY LGGGYVL
Sbjct: 162 FVRITPLIINL--KQIQDPMLYWGFLDGRAKPFRKGKWKEPEWNLCDRYLPYQLGGGYVL 219

Query: 180 SHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRYHDVRFDTEFQSRGCNNSYLIVHK 239
           S+ L++F++ N+ +   Y +EDVSVG W+  LD+   HD RFDTE++SRGCNN YLI HK
Sbjct: 220 SYELIRFLAINAQLFRHYRNEDVSVGAWIGGLDVKYVHDPRFDTEWRSRGCNNEYLITHK 279

Query: 240 QNMHQL 245
               ++
Sbjct: 280 HTEQEM 285

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal beta-linked galactose residue. Required for vulval morphogenesis and zygotic cytokinesis, suggesting that glycosaminoglycans play a central role in vulval morphogenesis.

Caenorhabditis elegans (taxid: 6239)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 3

EC: 4

>sp|Q96L58|B3GT6_HUMAN Beta-1,3-galactosyltransferase 6 OS=Homo sapiens GN=B3GALT6 PE=2 SV=2

 Score =  192 bits (487), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 94/222 (42%), Positives = 140/222 (63%), Gaps = 4/222 (1%)

Query: 28  TSSKNYIRRKNIRDTWI-KNIEKYQVKYLFSIGNKENVVDVK--LKEEIRRYDDILLLNQ 84
           ++ +   RR  IR TW+ +      V   F++G      + +  L+ E  R+ D+LLL  
Sbjct: 65  SAPRAAERRSVIRSTWLARRGAPGDVWARFAVGTAGLGAEERRALEREQARHGDLLLLPA 124

Query: 85  VPDEYSSLSQKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHYEKK-LYWG 143
           + D Y +L+ KVL    ++ EH  F+++LK DDD+F R+  ++ EL  +    ++ LYWG
Sbjct: 125 LRDAYENLTAKVLAMLAWLDEHVAFEFVLKADDDSFARLDALLAELRAREPARRRRLYWG 184

Query: 144 FFDGRARVRRAGKWKEKNWFLCDRYLPYALGGGYVLSHLLVKFISENSHMLSSYISEDVS 203
           FF GR RV+  G+W+E  W LCD YLPYALGGGYVLS  LV ++  +   L ++ SEDVS
Sbjct: 185 FFSGRGRVKPGGRWREAAWQLCDYYLPYALGGGYVLSADLVHYLRLSRDYLRAWHSEDVS 244

Query: 204 VGVWLSALDITRYHDVRFDTEFQSRGCNNSYLIVHKQNMHQL 245
           +G WL+ +D+ R HD RFDTE++SRGC+N YL+ HKQ++  +
Sbjct: 245 LGAWLAPVDVQREHDPRFDTEYRSRGCSNQYLVTHKQSLEDM 286

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal beta-linked galactose residue. Has a preference for galactose-beta-1,4-xylose that is found in the linker region of glycosaminoglycans, such as heparan sulfate and chondroitin sulfate. Has no activity towards substrates with terminal glucosamine or galactosamine residues.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 3

EC: 4

>sp|Q5M900|B3GL2_XENTR UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2 OS=Xenopus tropicalis GN=b3galnt2 PE=2 SV=1

 Score =  109 bits (272), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 55/153 (35%), Positives = 94/153 (61%), Gaps = 2/153 (1%)

Query: 66  DVKLKEEIRRYDDILLLNQVPDEYSSLSQKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPN 125
           D  L+EE   + DI+ ++ V D Y ++  K+L+ +++  E   F++LLK DDD F+ + N
Sbjct: 295 DALLQEESTTFQDIVFVHVV-DTYRNVPSKLLNFYQWTAEFTSFEFLLKTDDDCFIDIEN 353

Query: 126 IIHELENKFHYEKKLYWGFFDGRARVRRAGKWKEKNWFLCDRYLPYALGGGYVLSHLLVK 185
           ++ ++ +K   ++  +WG F     V R GKW+E   +L   Y  +A G GYV+S  +V+
Sbjct: 354 VLEKIAHKQLQKENTWWGNFRLNWAVDRTGKWQELE-YLSPAYPAFACGSGYVISQDIVQ 412

Query: 186 FISENSHMLSSYISEDVSVGVWLSALDITRYHD 218
           +++ NS  L +Y  EDVS+G+W+SA+  +RY D
Sbjct: 413 WLASNSQRLKTYQGEDVSMGIWMSAIGPSRYQD 445

Beta-1,3-N-acetylgalactosaminyltransferase active in synthesizing a unique carbohydrate structure, GalNAc-beta-1-3GlcNAc, on N- and O-glycans.

Xenopus tropicalis (taxid: 8364)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q6NRQ1|B3GL2_XENLA UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2 OS=Xenopus laevis GN=b3galnt2 PE=2 SV=1

 Score =  108 bits (270), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 56/159 (35%), Positives = 96/159 (60%), Gaps = 2/159 (1%)

Query: 66  DVKLKEEIRRYDDILLLNQVPDEYSSLSQKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPN 125
           D  L+EE   + DI+ +N V D Y ++  K+L+ +++  +   F++LLK DDD F+ + N
Sbjct: 293 DALLQEESTTFQDIVFVNVV-DTYRNVPSKLLNFYRWTVQLTRFEFLLKTDDDCFIDIDN 351

Query: 126 IIHELENKFHYEKKLYWGFFDGRARVRRAGKWKEKNWFLCDRYLPYALGGGYVLSHLLVK 185
           ++  +  K   ++  +WG F     V R GKW+E   +L   Y  +A G GY++S+ +V+
Sbjct: 352 VLKMVAQKELQKENAWWGNFRLNWAVDRTGKWQELE-YLSPAYPAFACGSGYIISNDIVQ 410

Query: 186 FISENSHMLSSYISEDVSVGVWLSALDITRYHDVRFDTE 224
           +++ NS  L +Y  EDVS+G+W+SA+  +RY D R+  E
Sbjct: 411 WLAVNSQRLKTYQGEDVSMGIWMSAIGPSRYQDSRWLCE 449

Beta-1,3-N-acetylgalactosaminyltransferase active in synthesizing a unique carbohydrate structure, GalNAc-beta-1-3GlcNAc, on N- and O-glycans.

Xenopus laevis (taxid: 8355)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q502B3|B3GL2_DANRE UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2 OS=Danio rerio GN=b3galnt2 PE=2 SV=1

 Score =  101 bits (251), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 53/153 (34%), Positives = 89/153 (58%), Gaps = 2/153 (1%)

Query: 66  DVKLKEEIRRYDDILLLNQVPDEYSSLSQKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPN 125
           D  L+EE  R+ D++ ++ V   Y ++  K+L  +K+  E+ DF  LLK DDD F+ V  
Sbjct: 300 DEALQEESLRHGDMVFVDVV-GTYRNVPSKLLQFYKWSVENADFSLLLKTDDDCFIDVDA 358

Query: 126 IIHELENKFHYEKKLYWGFFDGRARVRRAGKWKEKNWFLCDRYLPYALGGGYVLSHLLVK 185
           ++ +++ +      L+WG F     V R GKW+E   +    Y  +A G GYV+S  LV+
Sbjct: 359 VLMKMQRRRLTHTSLWWGNFRQNWAVDRVGKWQELE-YASPAYPAFACGSGYVVSRDLVQ 417

Query: 186 FISENSHMLSSYISEDVSVGVWLSALDITRYHD 218
           +++ N+  L +Y  EDVS+G+W++A+   +Y D
Sbjct: 418 WLASNAQHLKAYQGEDVSMGIWMAAVGPRKYQD 450

Beta-1,3-N-acetylgalactosaminyltransferase active in synthesizing a unique carbohydrate structure, GalNAc-beta-1-3GlcNAc, on N- and O-glycans.

Danio rerio (taxid: 7955)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q8RX55|B3GTI_ARATH Probable beta-1,3-galactosyltransferase 18 OS=Arabidopsis thaliana GN=B3GALT18 PE=2 SV=1

 Score = 99.0 bits (245), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 123/234 (52%), Gaps = 15/234 (6%)

Query: 22  IVILILTSSKNYIRRKNIRDTWIKNI----EKYQVKYLFSI-GNKENVVDVKLKEEIRRY 76
           I I IL++  ++  R  +R +W++++     K   ++  ++ G KE  V+V+LK+E   +
Sbjct: 425 IFIGILSAGNHFSERMAVRKSWMQHVLITSAKVVARFFVALHGRKE--VNVELKKEAEYF 482

Query: 77  DDILLLNQVPDEYSSLSQKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHY 136
            DI+L+  + D Y  +  K +   ++    F  +Y++KCDDDTFV++  +I+E++ K   
Sbjct: 483 GDIVLVPYM-DSYDLVVLKTVAICEHGALAFSAKYIMKCDDDTFVKLGAVINEVK-KVPE 540

Query: 137 EKKLYWGFFDGRARVRRAGKWKE--KNWFLCDRYLPYALGGGYVLSHLLVKFISE--NSH 192
            + LY G  +   +  R GKW    + W   D Y PYA G GYVLS  + +FI +    H
Sbjct: 541 GRSLYIGNMNYYHKPLRGGKWAVTYEEWPEED-YPPYANGPGYVLSSDIARFIVDKFERH 599

Query: 193 MLSSYISEDVSVGVWLSAL-DITRYHDVRFDTEFQSRGCNNSYLIVHKQNMHQL 245
            L  +  EDVSVG+W+    + T   D R    F   GC  +Y   H Q+  Q+
Sbjct: 600 KLRLFKMEDVSVGMWVEHFKNTTNPVDYRHSLRFCQFGCVENYYTAHYQSPRQM 653

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|A7XDQ9|B3GTK_ARATH Probable beta-1,3-galactosyltransferase 20 OS=Arabidopsis thaliana GN=B3GALT20 PE=2 SV=1

 Score = 98.2 bits (243), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 127/244 (52%), Gaps = 14/244 (5%)

Query: 12  KFKNLKHSYFIVIL-ILTSSKNYIRRKNIRDTWIK--NIEKYQVKYLFSIG-NKENVVDV 67
           K   L  + F + + +L+++ ++  R  +R TW++  +I+   V   F +  N    V+ 
Sbjct: 427 KAPPLPGTPFRLFMGVLSATNHFSERMAVRKTWMQHPSIKSSDVVARFFVALNPRKEVNA 486

Query: 68  KLKEEIRRYDDILLLNQVPDEYSSLSQKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPNII 127
            LK+E   + DI++L  + D Y  +  K +   ++  ++    Y++KCDDDTF+RV +I+
Sbjct: 487 MLKKEAEYFGDIVILPFM-DRYELVVLKTIAICEFGVQNVTAPYIMKCDDDTFIRVESIL 545

Query: 128 HELENKFHYEKKLYWGFFDGRARVRRAGKWKE--KNWFLCDRYLPYALGGGYVLSHLLVK 185
            +++     EK LY G  + R R  R GKW    + W     Y PYA G GY++S  + K
Sbjct: 546 KQIDG-VSPEKSLYMGNLNLRHRPLRTGKWTVTWEEWPEA-VYPPYANGPGYIISSNIAK 603

Query: 186 FI-SENS-HMLSSYISEDVSVGVWLSALDITRYHDVRFDT--EFQSRGCNNSYLIVHKQN 241
           +I S+NS H L  +  EDVS+G+W+   + +    V +    +F   GC  +Y   H Q+
Sbjct: 604 YIVSQNSRHKLRLFKMEDVSMGLWVEQFNAS-MQPVEYSHSWKFCQYGCTLNYYTAHYQS 662

Query: 242 MHQL 245
             Q+
Sbjct: 663 PSQM 666

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q8GXG6|B3GTH_ARATH Probable beta-1,3-galactosyltransferase 17 OS=Arabidopsis thaliana GN=B3GALT17 PE=2 SV=2

 Score = 96.7 bits (239), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 116/231 (50%), Gaps = 10/231 (4%)

Query: 22  IVILILTSSKNYIRRKNIRDTWIKN--IEKYQVKYLFSIG-NKENVVDVKLKEEIRRYDD 78
           + I IL++  ++  R  +R +W++   +   +V   F +  +    V+V LK+E   + D
Sbjct: 427 LFIGILSAGNHFAERMAVRKSWMQQKLVRSSKVVARFFVALHARKEVNVDLKKEAEYFGD 486

Query: 79  ILLLNQVPDEYSSLSQKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHYEK 138
           I+++  + D Y  +  K +   +Y       +Y++KCDDDTFVRV  +I E E K    +
Sbjct: 487 IVIVPYM-DHYDLVVLKTVAICEYGVNTVAAKYVMKCDDDTFVRVDAVIQEAE-KVKGRE 544

Query: 139 KLYWGFFDGRARVRRAGKWKE--KNWFLCDRYLPYALGGGYVLSHLLVKFISEN--SHML 194
            LY G  +   +  R GKW    + W   + Y PYA G GY+LS+ + KFI ++     L
Sbjct: 545 SLYIGNINFNHKPLRTGKWAVTFEEWPE-EYYPPYANGPGYILSYDVAKFIVDDFEQKRL 603

Query: 195 SSYISEDVSVGVWLSALDITRYHDVRFDTEFQSRGCNNSYLIVHKQNMHQL 245
             +  EDVS+G+W+   + TR   V    +F   GC   Y   H Q+  Q+
Sbjct: 604 RLFKMEDVSMGMWVEKFNETRPVAVVHSLKFCQFGCIEDYFTAHYQSPRQM 654

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q9LV16|B3GTJ_ARATH Probable beta-1,3-galactosyltransferase 19 OS=Arabidopsis thaliana GN=B3GALT19 PE=2 SV=2

 Score = 91.3 bits (225), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 122/233 (52%), Gaps = 13/233 (5%)

Query: 22  IVILILTSSKNYIRRKNIRDTWIKN----IEKYQVKYLFSIGNKENVVDVKLKEEIRRYD 77
           + I IL++  ++  R  +R +W+++      K   ++  ++ +++ V +V+LK+E   + 
Sbjct: 434 MFIGILSAGNHFAERMAVRRSWMQHKLVKSSKVVARFFVALHSRKEV-NVELKKEAEFFG 492

Query: 78  DILLLNQVPDEYSSLSQKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHYE 137
           DI+++  + D Y  +  K +   +Y       ++++KCDDDTFV+V  ++ E + K   +
Sbjct: 493 DIVIVPYM-DSYDLVVLKTVAICEYGAHQLAAKFIMKCDDDTFVQVDAVLSEAK-KTPTD 550

Query: 138 KKLYWGFFDGRARVRRAGKWKE--KNWFLCDRYLPYALGGGYVLSHLLVKFISE--NSHM 193
           + LY G  +   +  R GKW    + W   D Y PYA G GY+LS+ + +FI +    H 
Sbjct: 551 RSLYIGNINYYHKPLRQGKWSVTYEEWPEED-YPPYANGPGYILSNDISRFIVKEFEKHK 609

Query: 194 LSSYISEDVSVGVWLSAL-DITRYHDVRFDTEFQSRGCNNSYLIVHKQNMHQL 245
           L  +  EDVSVG+W+    + T+  D      F   GC  +YL  H Q+  Q+
Sbjct: 610 LRMFKMEDVSVGMWVEQFNNGTKPVDYIHSLRFCQFGCIENYLTAHYQSPRQM 662

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	245
322796353	335	hypothetical protein SINV_00253 [Solenop	0.934	0.683	0.523	1e-63
380017367	337	PREDICTED: beta-1,3-galactosyltransferas	0.902	0.655	0.510	5e-61
340729693	337	PREDICTED: beta-1,3-galactosyltransferas	0.926	0.673	0.485	1e-60
332028945	319	Beta-1,3-galactosyltransferase 6 [Acromy	0.951	0.730	0.510	3e-60
383859246	319	PREDICTED: beta-1,3-galactosyltransferas	0.922	0.708	0.495	4e-60
321453651	286	hypothetical protein DAPPUDRAFT_65862 [D	0.918	0.786	0.495	6e-59
307201513	320	Beta-1,3-galactosyltransferase 6 [Harpeg	0.926	0.709	0.502	2e-58
307171076	329	Beta-1,3-galactosyltransferase 6 [Campon	0.930	0.693	0.487	4e-58
350411373	337	PREDICTED: beta-1,3-galactosyltransferas	0.926	0.673	0.476	4e-58
345493480	315	PREDICTED: beta-1,3-galactosyltransferas	0.918	0.714	0.489	7e-58

>gi|322796353|gb|EFZ18894.1| hypothetical protein SINV_00253 [Solenopsis invicta]

 Score =  248 bits (633), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 123/235 (52%), Positives = 171/235 (72%), Gaps = 6/235 (2%)

Query: 17  KHSYFIVILILTSSKNYIRRKNIRDTWIKNIE-KYQVKYLFSIGNKENVVDVK--LKEEI 73
           KH Y ++ILIL++  N  RR  IR TW+ + E    VKYLF IG ++ + + +  L+ E 
Sbjct: 57  KHHYRLIILILSNPDNLERRNTIRKTWLASREHDIMVKYLFVIGTQDILPEQRNTLQSEK 116

Query: 74  RRYDDILLLNQVPDEYSSLSQKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELE-- 131
            ++DD+LLL ++ D Y +L++KVLH+ K ++EH+DF YLLKCDDDT+V V  I+ EL+  
Sbjct: 117 NKFDDLLLLPRLQDSYGTLTKKVLHALKAVHEHYDFDYLLKCDDDTYVLVHKILKELDRW 176

Query: 132 NKFHYEKKLYWGFFDGRARVRRAGKWKEKNWFLCDRYLPYALGGGYVLSHLLVKFISENS 191
                 ++LYWGFF+GRA+V+R+G WKE +W LCD YLPYALGGGYVLS+ LVKF++ N 
Sbjct: 177 QSKGTRRELYWGFFNGRAQVKRSGPWKETDWILCDYYLPYALGGGYVLSYNLVKFVANNV 236

Query: 192 HMLSSYISEDVSVGVWLSAL-DITRYHDVRFDTEFQSRGCNNSYLIVHKQNMHQL 245
            +L  + SEDVSVG+WL+ L +I R HDVRFDTE++SRGC+N Y+I HKQ +  +
Sbjct: 237 DILKLHNSEDVSVGLWLAPLANIERKHDVRFDTEYRSRGCSNQYIITHKQTIQNM 291

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380017367|ref|XP_003692629.1| PREDICTED: beta-1,3-galactosyltransferase 6-like [Apis florea]

 Score =  240 bits (612), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 117/229 (51%), Positives = 171/229 (74%), Gaps = 8/229 (3%)

Query: 23  VILILTSSKNYIRRKNIRDTWIKNIEKYQVKYLFSIGNKENVVDVK--LKEEIRRYDDIL 80
           +ILIL+S  N  RR  IR TW+   ++  VK+ F IG  + + + +  L  E ++++D+L
Sbjct: 68  IILILSSPDNLERRATIRKTWLAQ-KQASVKHFFVIGTLDILPEQRETLHSEKQKFNDLL 126

Query: 81  LLNQVPDEYSSLSQKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHEL---ENKFHYE 137
           LL+++PD Y +L++KVL++FK  YE+++F +L+KCDDDTFV +  I+ EL   ENK   +
Sbjct: 127 LLSRLPDSYGTLTKKVLYAFKETYEYYEFDFLMKCDDDTFVLIHKILRELDKWENK-GTK 185

Query: 138 KKLYWGFFDGRARVRRAGKWKEKNWFLCDRYLPYALGGGYVLSHLLVKFISENSHMLSSY 197
           K+LYWGFF+G+A+V+R+G WKE +W LCD YLPYALGGGYVLS+ LVKFI+ N+ +   Y
Sbjct: 186 KELYWGFFNGKAQVKRSGPWKEIDWILCDYYLPYALGGGYVLSYNLVKFIATNADIFKLY 245

Query: 198 ISEDVSVGVWLSAL-DITRYHDVRFDTEFQSRGCNNSYLIVHKQNMHQL 245
            +EDVSVGVW++ L +I R HDVRFDTE++SRGC+N Y+++HKQ +  +
Sbjct: 246 KAEDVSVGVWIAPLANIERKHDVRFDTEYRSRGCSNQYIVMHKQTIENM 294

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340729693|ref|XP_003403131.1| PREDICTED: beta-1,3-galactosyltransferase 6-like [Bombus terrestris]

 Score =  238 bits (607), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 116/239 (48%), Positives = 174/239 (72%), Gaps = 12/239 (5%)

Query: 17  KHSYFIVILILTSSKNYIRRKNIRDTWIKNIEKYQVKYLFSIGNKENVVDVK--LKEEIR 74
           K  + +++LIL+S  N  RR  IR TW+   ++  VK+ F IG  + + + +  L  E +
Sbjct: 62  KTKFRLIVLILSSPDNLERRATIRKTWLAQ-KQATVKHFFVIGTLDILPEQRETLHSEQQ 120

Query: 75  RYDDILLLNQVPDEYSSLSQKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELE--N 132
           ++DD+LLL+++PD Y +L++KVL++FK IYE+++F +++KCDDDTF  V  I+ EL+  +
Sbjct: 121 KFDDLLLLSRLPDSYGTLTKKVLYAFKEIYEYYEFDFVMKCDDDTFALVHKILKELDKWD 180

Query: 133 KFHYEKKLYWGFFDGRARVRRAGKWKEKNWFLCDRYLPYALGGGYVLSHLLVKFISENSH 192
               +K+LYWGFF+G+A V+R+G WKE +W LCD YLPYALGGGY+LS+ LVKFI+ N+ 
Sbjct: 181 SKGTKKELYWGFFNGKAHVKRSGPWKEADWILCDYYLPYALGGGYILSYNLVKFIAINAD 240

Query: 193 MLSSYISEDVSVGVWLSAL-DITRYHDVRFDTEFQSRGCNNSYLIVHKQ------NMHQ 244
           +L  Y +EDVSVGVW++ L +I R HD+RF+TE++SRGC+N Y++ HKQ      NMH+
Sbjct: 241 ILKLYKAEDVSVGVWIAPLANIERKHDIRFNTEYRSRGCSNQYIVTHKQTIENMKNMHE 299

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332028945|gb|EGI68963.1| Beta-1,3-galactosyltransferase 6 [Acromyrmex echinatior]

 Score =  237 bits (605), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 126/247 (51%), Positives = 177/247 (71%), Gaps = 14/247 (5%)

Query: 4   SANQTGLSKFKNLKHSYFIVILILTSSKNYIRRKNIRDTWIKNIEKYQVKYLFSIGNKEN 63
           S  QT  SK   LKH   ++ LIL+S  N  RR  IR TW+   +   VK+ F IG ++ 
Sbjct: 35  SNRQTPGSK---LKHR--LIALILSSPDNLERRNTIRKTWLAEHDA-TVKHFFVIGTQDI 88

Query: 64  VVDVK--LKEEIRRYDDILLLNQVPDEYSSLSQKVLHSFKYIYEHFDFQYLLKCDDDTFV 121
           + + +  L+ E +++DD+LLL ++ D YS L++KVLH+ K ++EH+DF YLLKCDDD++V
Sbjct: 89  LPEQRNTLQSEKQKFDDLLLLPRLQDSYSMLTKKVLHTLKAVHEHYDFDYLLKCDDDSYV 148

Query: 122 RVPNIIHELE--NKFHYEKKLYWGFFDGRARVRRAGKWKEKNWFLCDRYLPYALGGGYVL 179
            V  I+ EL+       +++LYWGFF+GRA+V+R+G WKE +W LCD YLPYA+GGGYVL
Sbjct: 149 LVHKILKELDKWQSKGTKRELYWGFFNGRAQVKRSGPWKETDWILCDYYLPYAVGGGYVL 208

Query: 180 SHLLVKFISENSHMLSSYISEDVSVGVWLSAL-DITRYHDVRFDTEFQSRGCNNSYLIVH 238
           S+ LV+FI++N+ +L  + SEDVSVG+WL+ L +I R HDVRFDTE++SRGC+N Y+I H
Sbjct: 209 SYNLVEFIAKNADILKLHNSEDVSVGLWLAPLANIERKHDVRFDTEYRSRGCSNQYIITH 268

Query: 239 K---QNM 242
           K   QNM
Sbjct: 269 KLTVQNM 275

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383859246|ref|XP_003705106.1| PREDICTED: beta-1,3-galactosyltransferase 6-like [Megachile rotundata]

 Score =  237 bits (604), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 119/240 (49%), Positives = 174/240 (72%), Gaps = 14/240 (5%)

Query: 17  KHSYFIVILILTSSKNYIRRKNIRDTWIKNIEKYQVKYLFSIGNKENVVDVK--LKEEIR 74
           K  + ++ILIL+S  N  +R  IR TW+   ++  VK+ F IG  + + + +  L+ E +
Sbjct: 44  KGKFRLMILILSSPDNLEQRATIRKTWLAQ-KQATVKHFFVIGTLDLLSEQRETLQSEKQ 102

Query: 75  RYDDILLLNQVPDEYSSLSQKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHEL---E 131
           +++D+LLL+++PD Y +L++KVL++ K +Y+++DF +L KCDDDTFV V  ++ EL   E
Sbjct: 103 KFNDLLLLSRIPDSYGTLTKKVLYALKEVYKYYDFNFLFKCDDDTFVLVHKLLKELDKWE 162

Query: 132 NKFHYEKKLYWGFFDGRARVRRAGKWKEKNWFLCDRYLPYALGGGYVLSHLLVKFISENS 191
           NK   +K+LYWGFF+G+A+V+R+G WKE +W LCD YLPYALGGGY LS+ LVKFI+ N 
Sbjct: 163 NK-GTKKELYWGFFNGKAQVKRSGPWKETDWILCDYYLPYALGGGYALSYNLVKFIASNV 221

Query: 192 HMLSSYISEDVSVGVWLSAL-DITRYHDVRFDTEFQSRGCNNSYLIVHKQ------NMHQ 244
            +L  Y +EDVSVG+WL+ L +I R HDVRFDTE++SRGC+N Y++ HKQ      NMH+
Sbjct: 222 DILKLYKAEDVSVGLWLAPLANIERRHDVRFDTEYRSRGCSNQYIVTHKQTIENMKNMHE 281

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321453651|gb|EFX64867.1| hypothetical protein DAPPUDRAFT_65862 [Daphnia pulex]

 Score =  233 bits (593), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 115/232 (49%), Positives = 166/232 (71%), Gaps = 7/232 (3%)

Query: 17  KHSYFIVILILTSSKNYIRRKNIRDTWIKNIEKYQVKYLFSIGNK---ENVVDVKLKEEI 73
           + S+++++LI++       RK IR+TW+ ++   +VK+LF IG+K   E+V++  +KE  
Sbjct: 15  QKSFYLIVLIMSDPTKSATRKAIRETWL-SVSHQKVKHLFVIGSKGLAEDVLNDVIKENT 73

Query: 74  RRYDDILLLNQVPDEYSSLSQKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENK 133
             +D +L+L+ V + YSSL+ KVL  F++++ ++ F +LLKCDDD+FVR   ++ EL+ K
Sbjct: 74  THHD-MLILDSVSESYSSLTVKVLAGFQWLHLNYQFNFLLKCDDDSFVRTVPLLEELQKK 132

Query: 134 FHYEKKLYWGFFDGRARVRRAGKWKEKNWFLCDRYLPYALGGGYVLSHLLVKFISENSHM 193
              +  LYWGFF G + V + GKWKE  WFLCD YLPYALGGGY+LS  LV+FI+++  +
Sbjct: 133 --PQSHLYWGFFKGGSSVFQKGKWKESEWFLCDTYLPYALGGGYILSSDLVEFIAKSGPL 190

Query: 194 LSSYISEDVSVGVWLSALDITRYHDVRFDTEFQSRGCNNSYLIVHKQNMHQL 245
           L  Y SEDVSVGVWLS L I R HDVRFDTEF+SRGC N YLI HK++ +++
Sbjct: 191 LQQYKSEDVSVGVWLSPLKIRRVHDVRFDTEFKSRGCYNDYLITHKKSANEM 242

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307201513|gb|EFN81276.1| Beta-1,3-galactosyltransferase 6 [Harpegnathos saltator]

 Score =  231 bits (588), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 118/235 (50%), Positives = 167/235 (71%), Gaps = 8/235 (3%)

Query: 17  KHSYFIVILILTSSKNYIRRKNIRDTWIKNIEKYQVKYLFSIGNKENVVDVK--LKEEIR 74
           K  Y +++LIL+S  N  RR  IR TW+ +     V++LF IG  + + + +  L  E  
Sbjct: 45  KTKYRLIVLILSSPDNLERRDTIRKTWLVDYHA-TVRHLFVIGTLDILPEQRNTLLSEKD 103

Query: 75  RYDDILLLNQVPDEYSSLSQKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHEL---E 131
           +++D+LLL ++ D YS L++K+LH+ K  +E +DF +LLKCDDDT+V V  I+ EL   E
Sbjct: 104 KFNDLLLLPRLQDSYSMLTKKMLHALKATHERYDFDFLLKCDDDTYVLVHKILKELDRWE 163

Query: 132 NKFHYEKKLYWGFFDGRARVRRAGKWKEKNWFLCDRYLPYALGGGYVLSHLLVKFISENS 191
           N+    ++LYWGFF+GRA+V+R+G WKE +W LCD YLPYALGGGYVLS+ LVKFI+ N 
Sbjct: 164 NR-GTRRELYWGFFNGRAQVKRSGPWKETDWILCDYYLPYALGGGYVLSYNLVKFIASNV 222

Query: 192 HMLSSYISEDVSVGVWLSAL-DITRYHDVRFDTEFQSRGCNNSYLIVHKQNMHQL 245
            +L  + SEDVS+G+WL+ L +I R HDVRFDTE++SRGC+N Y+I HKQ +  +
Sbjct: 223 DILKLHNSEDVSIGLWLAPLANIERKHDVRFDTEYRSRGCSNQYIITHKQTIQNM 277

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307171076|gb|EFN63119.1| Beta-1,3-galactosyltransferase 6 [Camponotus floridanus]

 Score =  230 bits (587), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 115/236 (48%), Positives = 168/236 (71%), Gaps = 8/236 (3%)

Query: 17  KHSYFIVILILTSSKNYIRRKNIRDTWIKNI-EKYQVKYLFSIGNKENVVDVK--LKEEI 73
           K  Y ++ILIL+S  N  RR  IR TW+ +      +++ F +G ++ + + +  L+ E 
Sbjct: 52  KPKYRLIILILSSPDNLERRDTIRKTWLADRGHDAMMRHFFVVGTQDILPEQRNTLQSEK 111

Query: 74  RRYDDILLLNQVPDEYSSLSQKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHEL--- 130
            ++DD+LLL ++ D Y  L++KVL++ K IYE ++F +LLKCDDD+++ V  I+ EL   
Sbjct: 112 EKFDDLLLLPRLQDSYGILTKKVLYALKGIYERYNFDFLLKCDDDSYILVHKILKELDRW 171

Query: 131 ENKFHYEKKLYWGFFDGRARVRRAGKWKEKNWFLCDRYLPYALGGGYVLSHLLVKFISEN 190
           +NK    ++LYWGFF+GRA+V+R+G WKE +W LCD YLPYALGGGYVLS+ LVKFI+ N
Sbjct: 172 QNK-GTRRELYWGFFNGRAQVKRSGPWKETDWILCDYYLPYALGGGYVLSYNLVKFIASN 230

Query: 191 SHMLSSYISEDVSVGVWLSAL-DITRYHDVRFDTEFQSRGCNNSYLIVHKQNMHQL 245
           + +L    SED+SVG+WL+ L +I R HDVRFDTE++SRGC+N Y+I HKQ +  +
Sbjct: 231 ADILKLQNSEDISVGLWLAPLANIERKHDVRFDTEYRSRGCSNQYIITHKQTIQNM 286

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350411373|ref|XP_003489325.1| PREDICTED: beta-1,3-galactosyltransferase 6-like [Bombus impatiens]

 Score =  230 bits (586), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 114/239 (47%), Positives = 169/239 (70%), Gaps = 12/239 (5%)

Query: 17  KHSYFIVILILTSSKNYIRRKNIRDTWIKNIEKYQVKYLFSIGNKENVVDVK--LKEEIR 74
           K  + +++LIL++  N  RR  IR TW+   ++  VK+ F IG  +     +  L  E +
Sbjct: 62  KTKFRLMVLILSNPDNLERRATIRKTWLAQ-KQATVKHFFVIGTLDIFSGQRKTLHSEQQ 120

Query: 75  RYDDILLLNQVPDEYSSLSQKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELE--N 132
           ++DD+LLL ++ D Y++L++KVLH+FK IYE+++F +++KCDDDTF  V  I+ EL+  +
Sbjct: 121 KFDDLLLLPRLSDSYATLTKKVLHAFKEIYEYYEFDFVMKCDDDTFALVHKILKELDKWD 180

Query: 133 KFHYEKKLYWGFFDGRARVRRAGKWKEKNWFLCDRYLPYALGGGYVLSHLLVKFISENSH 192
               +K+LYWGFF+G+A V+R G WKE +W LCD YLPYALGGGY+LS+ LVKFI+ N+ 
Sbjct: 181 SKGTKKELYWGFFNGKAHVKRIGPWKETDWILCDYYLPYALGGGYILSYNLVKFIAINAD 240

Query: 193 MLSSYISEDVSVGVWLSAL-DITRYHDVRFDTEFQSRGCNNSYLIVHKQ------NMHQ 244
           +   Y +EDVSVGVW++ L +I R HD+RF+TE++SRGC+N Y++ HKQ      NMH+
Sbjct: 241 IFKLYKAEDVSVGVWIAPLANIERKHDIRFNTEYRSRGCSNQYIVTHKQTIENMKNMHE 299

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345493480|ref|XP_003427083.1| PREDICTED: beta-1,3-galactosyltransferase 6-like [Nasonia vitripennis]

 Score =  229 bits (584), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 116/237 (48%), Positives = 171/237 (72%), Gaps = 12/237 (5%)

Query: 17  KHSYFIVILILTSSKNYIRRKNIRDTWIKNIEKYQVKYLFSIGN----KENVVDVKLKEE 72
           K  + ++IL+L++ +N  RR  IR TW+ ++ + +VK  F+IG      E +  V+   E
Sbjct: 40  KQKFRLLILVLSAPENIERRDTIRKTWL-SLRQDEVKSFFAIGTLNFRPEQLQTVE--SE 96

Query: 73  IRRYDDILLLNQVPDEYSSLSQKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHEL-- 130
            ++++DILLL ++ D Y ++++KVL SF ++YE++DF ++LKCDDD+F  V  I+ EL  
Sbjct: 97  NQKHNDILLLPKLLDSYGTVTKKVLQSFVHMYENYDFDFVLKCDDDSFAVVDQILKELNR 156

Query: 131 -ENKFHYEKKLYWGFFDGRARVRRAGKWKEKNWFLCDRYLPYALGGGYVLSHLLVKFISE 189
            +NK    K+LYWG+F+GRARV+R+G WKE +WFLCD YLPYALGGGY+LS+ LVKFI+E
Sbjct: 157 WQNK-GLRKELYWGYFNGRARVKRSGPWKETDWFLCDYYLPYALGGGYILSYNLVKFIAE 215

Query: 190 NSHMLSSYISEDVSVGVWLSAL-DITRYHDVRFDTEFQSRGCNNSYLIVHKQNMHQL 245
           N  +L    SEDVSVG+W++ + +I R HD RFDTE++SRGC+N YL+ HKQ+   +
Sbjct: 216 NEDILKLQNSEDVSVGLWVAPVANIERKHDPRFDTEYRSRGCSNQYLVTHKQSSQDM 272

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	245
ZFIN|ZDB-GENE-101104-13	335	b3galt6 "UDP-Gal:betaGal beta	0.918	0.671	0.484	1.9e-53
UNIPROTKB|E1BYQ2	344	B3GALT6 "Uncharacterized prote	0.918	0.654	0.440	4e-51
WB|WBGene00005020	330	sqv-2 [Caenorhabditis elegans	0.971	0.721	0.432	3.6e-50
UNIPROTKB|F1MVH6	329	B3GALT6 "Uncharacterized prote	0.914	0.680	0.419	6.9e-47
UNIPROTKB|Q96L58	329	B3GALT6 "Beta-1,3-galactosyltr	0.918	0.683	0.419	1.4e-46
RGD|1309558	325	B3galt6 "UDP-Gal:betaGal beta	0.902	0.68	0.422	1.4e-46
UNIPROTKB|I3LU42	323	B3GALT6 "Uncharacterized prote	0.918	0.696	0.413	3e-46
MGI|MGI:2152819	325	B3galt6 "UDP-Gal:betaGal beta	0.902	0.68	0.414	2.1e-45
FB|FBgn0033315	382	beta3GalTII "Galactosyltransfe	0.775	0.497	0.414	5.3e-45
UNIPROTKB|E2R9G8	244	B3GALT6 "Uncharacterized prote	0.575	0.577	0.507	4.3e-38

ZFIN|ZDB-GENE-101104-13 b3galt6 "UDP-Gal:betaGal beta 1,3-galactosyltransferase polypeptide 6" [Danio rerio (taxid:7955)]

 Score = 553 (199.7 bits), Expect = 1.9e-53, P = 1.9e-53
 Identities = 111/229 (48%), Positives = 154/229 (67%)

Query:    19 SYFIVILILTSSKNYIRRKNIRDTWIKNIEKYQVKYLFSIGNKE-NVVDVK-LKEEIRRY 76
             S F+VILI T  K   RR  IR TW+   +  +V Y F IG +     D++ L  E  R+
Sbjct:    66 SAFLVILITTGPKYTERRSIIRSTWLTKHDP-EVLYWFVIGTEGLPAEDLQNLATEQIRH 124

Query:    77 DDILLLNQVPDEYSSLSQKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHY 136
              D+LLL  + D Y +L+QK+LH + ++ ++ +F+++LK DDDTF R+  +  EL+ K   
Sbjct:   125 HDLLLLPDLRDSYENLTQKLLHMYSWLDQNVEFKFVLKADDDTFARLDLLKEELKVK-EP 183

Query:   137 EKKLYWGFFDGRARVRRAGKWKEKNWFLCDRYLPYALGGGYVLSHLLVKFISENSHMLSS 196
             +++LYWGFF GR RV+ AGKWKE  W LCD YLPYALGGGYVLS  LV++I  N   L  
Sbjct:   184 KERLYWGFFSGRGRVKTAGKWKESAWELCDYYLPYALGGGYVLSADLVRYIRLNVGFLKI 243

Query:   197 YISEDVSVGVWLSALDITRYHDVRFDTEFQSRGCNNSYLIVHKQNMHQL 245
             + SEDVS+G WL+ +D+ R HD RFDTE++SRGC+N YL+ HKQ++  +
Sbjct:   244 WQSEDVSLGAWLAPVDVKRLHDPRFDTEYKSRGCSNKYLVTHKQSLEDM 292

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0006486 "protein glycosylation" evidence=IEA

GO:0047220 "galactosylxylosylprotein 3-beta-galactosyltransferase activity" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

UNIPROTKB|E1BYQ2 B3GALT6 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
 Identities = 104/236 (44%), Positives = 152/236 (64%)

Query:    17 KHSYFIVILILTSSKNYIRRKNIRDTWIKNI-----EKYQVKYLFSIGN--KENVVDVKL 69
             + S F+ +LI +  K   RR  IR TW+        +    +++   G    E +  ++L
Sbjct:    70 QESAFLAVLITSGPKYTERRSIIRSTWLAAAGRPPHDNIWSRFVIGTGGLGAEELRSLEL 129

Query:    70 KEEIRRYDDILLLNQVPDEYSSLSQKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHE 129
             ++   R+ D+LLL ++ D Y +L+ KVL ++ ++  H DFQ+ LK DDDTFVR+  ++ +
Sbjct:   130 EQS--RHRDLLLLPELRDSYENLTAKVLATYVWLDLHLDFQFALKADDDTFVRLDVLVED 187

Query:   130 LENKFHYEKKLYWGFFDGRARVRRAGKWKEKNWFLCDRYLPYALGGGYVLSHLLVKFISE 189
             L+ K    ++LYWGFF GR RV+  GKWKE  W LCD YLPYALGGGYVLS  LV ++  
Sbjct:   188 LKAK--EPRRLYWGFFSGRGRVKSGGKWKESAWVLCDYYLPYALGGGYVLSADLVHYLRL 245

Query:   190 NSHMLSSYISEDVSVGVWLSALDITRYHDVRFDTEFQSRGCNNSYLIVHKQNMHQL 245
             N   L+ + SEDVS+GVWL+ +D+ R HD RFDTE++SRGCNN Y++ HKQ++  +
Sbjct:   246 NKDYLNMWQSEDVSLGVWLAPIDVKRVHDPRFDTEYKSRGCNNKYIVTHKQSIEDM 301

GO:0006486 "protein glycosylation" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005797 "Golgi medial cisterna" evidence=IEA

GO:0006024 "glycosaminoglycan biosynthetic process" evidence=IEA

GO:0008499 "UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity" evidence=IEA

WB|WBGene00005020 sqv-2 [Caenorhabditis elegans (taxid:6239)]

 Score = 522 (188.8 bits), Expect = 3.6e-50, P = 3.6e-50
 Identities = 106/245 (43%), Positives = 151/245 (61%)

Query:     5 ANQTGLSKFKNLKHSYFIVILILTSSKNYIRRKNIRDTWIKNIEKYQVKYL--FSIGNKE 62
             +N   +S   NL  + F+ I ILTS     RR+N+RDTW +   K    ++  F++G   
Sbjct:    44 SNAPLISSPTNLPET-FLYISILTSPNETERRQNVRDTWFRLSTKGPSVFIAKFAVGTMG 102

Query:    63 NVVDVK--LKEEIRRYDDILLLNQVPDEYSSLSQKVLHSFKYIYEHFDFQYLLKCDDDTF 120
                + +  L EE  ++ D+ LL++  + Y  L++K L  F + + +F F++ LK D D+F
Sbjct:   103 LAAEDRRLLAEENEKFGDLALLDRHEESYERLAKKTLACFVHAFANFKFKFFLKTDIDSF 162

Query:   121 VRVPNIIHELENKFHYEKKLYWGFFDGRARVRRAGKWKEKNWFLCDRYLPYALGGGYVLS 180
             VR+  +I  L  K   +  LYWGF DGRA+  R GKWKE  W LCDRYLPY LGGGYVLS
Sbjct:   163 VRITPLIINL--KQIQDPMLYWGFLDGRAKPFRKGKWKEPEWNLCDRYLPYQLGGGYVLS 220

Query:   181 HLLVKFISENSHMLSSYISEDVSVGVWLSALDITRYHDVRFDTEFQSRGCNNSYLIVHKQ 240
             + L++F++ N+ +   Y +EDVSVG W+  LD+   HD RFDTE++SRGCNN YLI HK 
Sbjct:   221 YELIRFLAINAQLFRHYRNEDVSVGAWIGGLDVKYVHDPRFDTEWRSRGCNNEYLITHKH 280

Query:   241 NMHQL 245
                ++
Sbjct:   281 TEQEM 285

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0000910 "cytokinesis" evidence=IMP

GO:0051301 "cell division" evidence=IMP

GO:0040018 "positive regulation of multicellular organism growth" evidence=IMP

GO:0018991 "oviposition" evidence=IMP

GO:0040011 "locomotion" evidence=IMP

GO:0002009 "morphogenesis of an epithelium" evidence=IMP

GO:0040025 "vulval development" evidence=IMP

GO:0000003 "reproduction" evidence=IMP

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0047220 "galactosylxylosylprotein 3-beta-galactosyltransferase activity" evidence=IDA

GO:0006024 "glycosaminoglycan biosynthetic process" evidence=IDA

UNIPROTKB|F1MVH6 B3GALT6 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
 Identities = 97/231 (41%), Positives = 147/231 (63%)

Query:    21 FIVILILTSSKNYIRRKNIRDTWI--KNIEKYQVKYLFSIGNKENVVDVK---LKEEIRR 75
             F+ +L+ ++ +   RR  +R TW+  +      V   F++G    + D +   L+ E  +
Sbjct:    57 FLAVLVASAPRAAERRSVVRSTWLAARRGGPGDVWARFAVGTS-GLGDEERRALEREQAQ 115

Query:    76 YDDILLLNQVPDEYSSLSQKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFH 135
             + D+LLL  + D Y +L+ KVL    ++ EH  F+++LK DDD+F R+  ++ EL  +  
Sbjct:   116 HGDLLLLPGLRDAYENLTAKVLAMLAWLDEHVAFEFVLKADDDSFARLDAVLAELRARDP 175

Query:   136 YEKK-LYWGFFDGRARVRRAGKWKEKNWFLCDRYLPYALGGGYVLSHLLVKFISENSHML 194
               ++ LYWGFF GR RVR  G+W+E  W LCD YLPYALGGGYVLS  LV+++  +   L
Sbjct:   176 ARRRRLYWGFFSGRGRVRPGGRWREAAWQLCDYYLPYALGGGYVLSADLVRYLRLSREYL 235

Query:   195 SSYISEDVSVGVWLSALDITRYHDVRFDTEFQSRGCNNSYLIVHKQNMHQL 245
              ++ SEDVS+G WL+ +D+ R HD RFDTE++SRGCNN YL+ HKQ++  +
Sbjct:   236 RAWHSEDVSLGAWLAPVDVQREHDPRFDTEYKSRGCNNQYLVTHKQSLEDM 286

GO:0008499 "UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity" evidence=IEA

GO:0006024 "glycosaminoglycan biosynthetic process" evidence=IEA

GO:0005797 "Golgi medial cisterna" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0006486 "protein glycosylation" evidence=IEA

UNIPROTKB|Q96L58 B3GALT6 "Beta-1,3-galactosyltransferase 6" [Homo sapiens (taxid:9606)]

 Score = 488 (176.8 bits), Expect = 1.4e-46, P = 1.4e-46
 Identities = 96/229 (41%), Positives = 145/229 (63%)

Query:    21 FIVILILTSSKNYIRRKNIRDTWI-KNIEKYQVKYLFSIGNKENVVDVK--LKEEIRRYD 77
             F+ +L+ ++ +   RR  IR TW+ +      V   F++G      + +  L+ E  R+ 
Sbjct:    58 FLAVLVASAPRAAERRSVIRSTWLARRGAPGDVWARFAVGTAGLGAEERRALEREQARHG 117

Query:    78 DILLLNQVPDEYSSLSQKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHYE 137
             D+LLL  + D Y +L+ KVL    ++ EH  F+++LK DDD+F R+  ++ EL  +    
Sbjct:   118 DLLLLPALRDAYENLTAKVLAMLAWLDEHVAFEFVLKADDDSFARLDALLAELRAREPAR 177

Query:   138 KK-LYWGFFDGRARVRRAGKWKEKNWFLCDRYLPYALGGGYVLSHLLVKFISENSHMLSS 196
             ++ LYWGFF GR RV+  G+W+E  W LCD YLPYALGGGYVLS  LV ++  +   L +
Sbjct:   178 RRRLYWGFFSGRGRVKPGGRWREAAWQLCDYYLPYALGGGYVLSADLVHYLRLSRDYLRA 237

Query:   197 YISEDVSVGVWLSALDITRYHDVRFDTEFQSRGCNNSYLIVHKQNMHQL 245
             + SEDVS+G WL+ +D+ R HD RFDTE++SRGC+N YL+ HKQ++  +
Sbjct:   238 WHSEDVSLGAWLAPVDVQREHDPRFDTEYRSRGCSNQYLVTHKQSLEDM 286

GO:0006486 "protein glycosylation" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0047220 "galactosylxylosylprotein 3-beta-galactosyltransferase activity" evidence=IEA

GO:0008499 "UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity" evidence=IEA

GO:0032580 "Golgi cisterna membrane" evidence=IEA

GO:0015012 "heparan sulfate proteoglycan biosynthetic process" evidence=IEA

GO:0030206 "chondroitin sulfate biosynthetic process" evidence=IEA

GO:0006024 "glycosaminoglycan biosynthetic process" evidence=IMP

GO:0035250 "UDP-galactosyltransferase activity" evidence=IDA

GO:0005797 "Golgi medial cisterna" evidence=IDA

GO:0000139 "Golgi membrane" evidence=TAS

GO:0005975 "carbohydrate metabolic process" evidence=TAS

GO:0030203 "glycosaminoglycan metabolic process" evidence=TAS

GO:0030204 "chondroitin sulfate metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

RGD|1309558 B3galt6 "UDP-Gal:betaGal beta 1,3-galactosyltransferase, polypeptide 6" [Rattus norvegicus (taxid:10116)]

 Score = 488 (176.8 bits), Expect = 1.4e-46, P = 1.4e-46
 Identities = 96/227 (42%), Positives = 145/227 (63%)

Query:    21 FIVILILTSSKNYIRRKNIRDTWIKNIEKYQVKYL---FSIGNKENVVDVK--LKEEIRR 75
             F+ +L+ ++ +   RR  +R TW+    +   K +   F++G      + +  L+ E  +
Sbjct:    52 FLAVLVASAPRAVERRTAVRSTWLAQERRGGPKDVWARFAVGTSGLGAEERRTLELEQAQ 111

Query:    76 YDDILLLNQVPDEYSSLSQKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFH 135
             + D+LLL  + D Y +L+ KVL    ++ EH DF+++LK DDD+F R+  I+ EL  +  
Sbjct:   112 HGDLLLLPALRDAYENLTAKVLAMLTWLDEHVDFEFVLKADDDSFARLDAILVELRAREP 171

Query:   136 YEKK-LYWGFFDGRARVRRAGKWKEKNWFLCDRYLPYALGGGYVLSHLLVKFISENSHML 194
               ++ LYWGFF GR RV+  G+W+E  W LCD YLPYALGGGYVLS  LV ++  +   L
Sbjct:   172 ARRRRLYWGFFSGRGRVKPGGRWREAAWQLCDYYLPYALGGGYVLSADLVHYLRLSREYL 231

Query:   195 SSYISEDVSVGVWLSALDITRYHDVRFDTEFQSRGCNNSYLIVHKQN 241
              ++ SEDVS+G WL+ +D+ R HD RFDTE++SRGC+N YL+ HKQ+
Sbjct:   232 RAWHSEDVSLGTWLAPVDVQREHDPRFDTEYKSRGCSNQYLVTHKQS 278

GO:0005797 "Golgi medial cisterna" evidence=IEA;ISO

GO:0006024 "glycosaminoglycan biosynthetic process" evidence=IEA;ISO

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008499 "UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity" evidence=IEA;ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0035250 "UDP-galactosyltransferase activity" evidence=ISO

UNIPROTKB|I3LU42 B3GALT6 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
 Identities = 95/230 (41%), Positives = 145/230 (63%)

Query:    21 FIVILILTSSKNYIRRKNIRDTWI--KNIEKYQVKYLFSIGNKENVVDVK--LKEEIRRY 76
             F+ +L+ ++ +   RR  +R TW+  +      V   F++G      + +  L+ E  R+
Sbjct:    51 FLAVLVASAPRAAERRSVVRSTWLAARRGGPGDVWARFAVGTDGLGAEERRALEREQARH 110

Query:    77 DDILLLNQVPDEYSSLSQKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHY 136
              D+LLL  + D Y +L+ KVL    ++ EH  F+++LK DDD+F R+  ++ +L  +   
Sbjct:   111 GDLLLLPTLRDAYENLTAKVLAMLAWLDEHVAFEFVLKADDDSFARLDALLADLRARDPA 170

Query:   137 EKK-LYWGFFDGRARVRRAGKWKEKNWFLCDRYLPYALGGGYVLSHLLVKFISENSHMLS 195
              ++ LYWGFF GR RVR  G+W+E  W LCD YLPYALGGGYVLS  LV ++  +   L 
Sbjct:   171 RRRRLYWGFFSGRGRVRPGGRWREAAWQLCDYYLPYALGGGYVLSADLVHYLRFSREYLR 230

Query:   196 SYISEDVSVGVWLSALDITRYHDVRFDTEFQSRGCNNSYLIVHKQNMHQL 245
             ++ SEDVS+G WL+ +D+ R HD RFDTE++SRGC+N YL+ HKQ++  +
Sbjct:   231 AWHSEDVSMGAWLAPVDVQREHDPRFDTEYKSRGCSNQYLVTHKQSLEDM 280

GO:0008499 "UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity" evidence=IEA

GO:0006024 "glycosaminoglycan biosynthetic process" evidence=IEA

GO:0005797 "Golgi medial cisterna" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0006486 "protein glycosylation" evidence=IEA

MGI|MGI:2152819 B3galt6 "UDP-Gal:betaGal beta 1,3-galactosyltransferase, polypeptide 6" [Mus musculus (taxid:10090)]

 Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
 Identities = 94/227 (41%), Positives = 140/227 (61%)

Query:    21 FIVILILTSSKNYIRRKNIRDTWIK-----NIEKYQVKYLFSIGNKENVVDVKLKEEIRR 75
             F+ +L+ ++ +   RR  +R TW+        E    ++    G   +     L+ E  +
Sbjct:    52 FLAVLVASAPRAVERRTAVRSTWLAPERRGGPEDVWARFAVGTGGLGSEERRALELEQAQ 111

Query:    76 YDDILLLNQVPDEYSSLSQKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFH 135
             + D+LLL  + D Y +L+ KVL    ++ E  DF+++LK DDD+F R+  I+ +L  +  
Sbjct:   112 HGDLLLLPALRDAYENLTAKVLAMLTWLDERVDFEFVLKADDDSFARLDAILVDLRAREP 171

Query:   136 YEKK-LYWGFFDGRARVRRAGKWKEKNWFLCDRYLPYALGGGYVLSHLLVKFISENSHML 194
               ++ LYWGFF GR RV+  G+W+E  W LCD YLPYALGGGYVLS  LV ++  +   L
Sbjct:   172 ARRRRLYWGFFSGRGRVKPGGRWREAAWQLCDYYLPYALGGGYVLSADLVHYLRLSREYL 231

Query:   195 SSYISEDVSVGVWLSALDITRYHDVRFDTEFQSRGCNNSYLIVHKQN 241
              ++ SEDVS+G WL+ +D+ R HD RFDTE++SRGCNN YL+ HKQ+
Sbjct:   232 RAWHSEDVSLGTWLAPVDVQREHDPRFDTEYKSRGCNNQYLVTHKQS 278

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005797 "Golgi medial cisterna" evidence=ISO;IDA

GO:0006024 "glycosaminoglycan biosynthetic process" evidence=ISO;IDA

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0008499 "UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity" evidence=IDA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

GO:0035250 "UDP-galactosyltransferase activity" evidence=ISO

GO:0047220 "galactosylxylosylprotein 3-beta-galactosyltransferase activity" evidence=IEA

FB|FBgn0033315 beta3GalTII "Galactosyltransferase II" [Drosophila melanogaster (taxid:7227)]

 Score = 435 (158.2 bits), Expect = 5.3e-45, Sum P(2) = 5.3e-45
 Identities = 85/205 (41%), Positives = 134/205 (65%)

Query:    52 VKYLFSIGNKE--NVVDVKLKEEIRRYDDILLLNQVPDEYSSLSQKVLHSFKYIYEHFDF 109
             VK++FSIG  +  +    +L++E  + +D+LLLN+  D Y +L+ K++ S   +  H++F
Sbjct:   137 VKHVFSIGTLDLSSSALAELEKEQNQNNDLLLLNRHHDTYKNLTAKLMQSLYILRRHYEF 196

Query:   110 QYLLKCDDDTFVRVPNIIHEL------------ENKFHYEKKLYWGFFDGRARVRRAGKW 157
              Y+LK DDDT+V++ ++++ L            E + H   +LYWG+F+GR+ ++  G+W
Sbjct:   197 SYMLKVDDDTYVKLDSLVNTLVSYDRKLLRKRSEYRDHVLPQLYWGYFNGRSTIKTKGQW 256

Query:   158 KEKNWFLCDRYLPYALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSAL-DITRY 216
             KE +++L   YLPYALGGGYVLS  L  +I  NS +LS Y SEDVSVG WL+ L  + R+
Sbjct:   257 KESSYYLSKNYLPYALGGGYVLSRSLCDYIVNNSQLLSHYGSEDVSVGTWLAPLRHVYRW 316

Query:   217 HDVRFDTEFQSRGCNNSYLIVHKQN 241
             HD RFDT +  R C + ++++HK+N
Sbjct:   317 HDPRFDTSYAPRKCRSYHMVLHKRN 341

GO:0008378 "galactosyltransferase activity" evidence=ISS;IDA;NAS

GO:0015012 "heparan sulfate proteoglycan biosynthetic process" evidence=IGI;IMP;NAS

GO:0030206 "chondroitin sulfate biosynthetic process" evidence=NAS

GO:0016020 "membrane" evidence=IEA

GO:0006486 "protein glycosylation" evidence=IEA

GO:0006024 "glycosaminoglycan biosynthetic process" evidence=IGI

UNIPROTKB|E2R9G8 B3GALT6 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 408 (148.7 bits), Expect = 4.3e-38, P = 4.3e-38
 Identities = 72/142 (50%), Positives = 101/142 (71%)

Query:   105 EHFDFQYLLKCDDDTFVRVPNIIHELENKFHYEKK-LYWGFFDGRARVRRAGKWKEKNWF 163
             EH  F+++LK DDD+F R+  ++ EL  +    ++ LYWGFF GR RV+  G+W+E  W 
Sbjct:    60 EHVAFEFVLKADDDSFARLDALLAELRAREPARRRRLYWGFFSGRGRVKPGGRWREAAWQ 119

Query:   164 LCDRYLPYALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRYHDVRFDT 223
             LCD YLPYALGGGYVLS  LV ++  +   L ++ SEDVS+G WL+ +D+ R HD RFDT
Sbjct:   120 LCDYYLPYALGGGYVLSADLVHYLRLSREYLRAWHSEDVSLGAWLAPVDVQREHDPRFDT 179

Query:   224 EFQSRGCNNSYLIVHKQNMHQL 245
             E++SRGC+N YL+ HKQ++  +
Sbjct:   180 EYKSRGCSNQYLVTHKQSLEDM 201

GO:0008499 "UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity" evidence=IEA

GO:0006024 "glycosaminoglycan biosynthetic process" evidence=IEA

GO:0005797 "Golgi medial cisterna" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0006486 "protein glycosylation" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q91Z92	B3GT6_MOUSE	2, ., 4, ., 1, ., 1, 3, 4	0.3941	0.9591	0.7230	yes	N/A
Q96L58	B3GT6_HUMAN	2, ., 4, ., 1, ., 1, 3, 4	0.4234	0.8897	0.6626	yes	N/A
Q9N491	SQV2_CAEEL	2, ., 4, ., 1, ., 1, 3, 4	0.4308	0.9755	0.7242	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.4.1	0.766
4th Layer	2.4.1.79	LOW CONFIDENCE prediction!
3rd Layer	2.4.1.134	0.824

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	245
pfam01762	196	pfam01762, Galactosyl_T, Galactosyltransferase	8e-27
PLN03133	636	PLN03133, PLN03133, beta-1,3-galactosyltransferase	1e-16
PLN03193	408	PLN03193, PLN03193, beta-1,3-galactosyltransferase	2e-15

>gnl|CDD|216686 pfam01762, Galactosyl_T, Galactosyltransferase

 Score =  102 bits (255), Expect = 8e-27
 Identities = 56/200 (28%), Positives = 84/200 (42%), Gaps = 22/200 (11%)

Query: 35  RRKNIRDTW--IKNIEKYQVKYLFSIGNKENVVDVKLK----EEIRRYDDILLLNQVPDE 88
           RR  IR TW    N E  ++K LF +G   +  D K+K    EE + Y DI++++   D 
Sbjct: 2   RRNAIRKTWMNKGNSEGGRIKSLFLVGLSADT-DGKVKDLVMEEAKLYGDIVVVDFE-DT 59

Query: 89  YSSLSQKVLHSFKYIYEHFD-FQYLLKCDDDTFVRVPNIIHELENKF--HYEKKLYWGFF 145
           Y +L+ K L    Y        +Y+ K DDD +     ++  L+       E   Y    
Sbjct: 60  YENLTFKTLTGLLYAVSKAPSAKYIGKIDDDVYFFPDKLLSLLDRGNINPSESSFYGYVM 119

Query: 146 DGRARVRRAGKWKEKNWFL------CDRYLPYALGGGYVLSHLLVKFISENSHMLSSYIS 199
                +R     K+  W++      C RY PYA G  Y+LS    + + + S        
Sbjct: 120 KEGPVIRN----KKSKWYVPPSDYPCSRYPPYASGPFYLLSRDAAELLLKASKHRRFLQI 175

Query: 200 EDVSV-GVWLSALDITRYHD 218
           EDV V G+    L I+R   
Sbjct: 176 EDVYVTGILADDLGISRVDL 195

This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta- galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. Length = 196

>gnl|CDD|215596 PLN03133, PLN03133, beta-1,3-galactosyltransferase; Provisional

 Score = 78.3 bits (193), Expect = 1e-16
 Identities = 65/241 (26%), Positives = 116/241 (48%), Gaps = 25/241 (10%)

Query: 16  LKHSYFIVILILTSSKNYIRRKNIRDTWIK--NIEKYQVKYLFSIG-NKENVVDVKLKEE 72
            K    + I + +++ N+ RR  +R TW++   +    V   F +G +K  +V+ +L  E
Sbjct: 381 PKKPLDLFIGVFSTANNFKRRMAVRRTWMQYDAVRSGAVAVRFFVGLHKNQMVNEELWNE 440

Query: 73  IRRYDDILLLNQVPDEYSSLSQKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELEN 132
            R Y DI L+  V D YS ++ K L    +  E    +Y++K DDD FVRV  ++  L  
Sbjct: 441 ARTYGDIQLMPFV-DYYSLITWKTLAICIFGTEVVSAKYVMKTDDDAFVRVDEVLASL-K 498

Query: 133 KFHYEKKLYWGFFDGRARVRRAGKWKEKNWFLC------DRYLPYALGGGYVLSHLLVKF 186
           + +    L +G  +  ++  R     +  W++       + Y P+A G GYV+S  + K 
Sbjct: 499 RTNVSHGLLYGLINSDSQPHRN---PDSKWYISPEEWPEETYPPWAHGPGYVVSRDIAKE 555

Query: 187 ISENSHM--LSSYISEDVSVGVWLS-----ALDITRYHDVRFDTEFQSRGCNNSYLIVHK 239
           + +      L  +  EDV++G+W++      L++   +D R   E    GC + Y++ H 
Sbjct: 556 VYKRHKEGRLKMFKLEDVAMGIWIAEMKKEGLEVKYENDGRIYNE----GCKDGYVVAHY 611

Query: 240 Q 240
           Q
Sbjct: 612 Q 612

Length = 636

>gnl|CDD|178735 PLN03193, PLN03193, beta-1,3-galactosyltransferase; Provisional

 Score = 74.2 bits (182), Expect = 2e-15
 Identities = 65/237 (27%), Positives = 110/237 (46%), Gaps = 25/237 (10%)

Query: 17  KHSYFIVILILTSSKNYIRRKNIRDTWIKNIEKYQ-------VKYLFSIGNKEN---VVD 66
           K  Y +V+ I T+  +  RR ++R TW+   EK +       +   F IG+      ++D
Sbjct: 136 KRRYLMVVGINTAFSSRKRRDSVRATWMPQGEKRKKLEEEKGIIIRFVIGHSATSGGILD 195

Query: 67  VKLKEEIRRYDDILLLNQVPDEYSSLSQKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPNI 126
             ++ E R++ D L L+ V + Y  LS K    F      +D  + +K DDD  V +  +
Sbjct: 196 RAIEAEDRKHGDFLRLDHV-EGYLELSAKTKTYFATAVAMWDADFYVKVDDDVHVNIATL 254

Query: 127 IHELENKFHYEK-KLYWGFF-DGRARVRRAGKWKEKNWF----LCDRYLPYALGGGYVLS 180
              L    H +K ++Y G    G    ++  ++ E  ++      ++Y  +A G  Y +S
Sbjct: 255 GETLVR--HRKKPRVYIGCMKSGPVLSQKGVRYHEPEYWKFGENGNKYFRHATGQLYAIS 312

Query: 181 HLLVKFISENSHMLSSYISEDVSVGVWLSALDITRYHDVRF------DTEFQSRGCN 231
             L  +IS N H+L  Y +EDVS+G W   LD+    D R       D E++++  N
Sbjct: 313 KDLASYISINQHVLHKYANEDVSLGSWFIGLDVEHIDDRRLCCGTPPDCEWKAQAGN 369

Length = 408

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	245
KOG2287|consensus	349		100.0
PLN03133	636	beta-1,3-galactosyltransferase; Provisional	100.0
PLN03193	408	beta-1,3-galactosyltransferase; Provisional	100.0
PF01762	195	Galactosyl_T: Galactosyltransferase; InterPro: IPR	100.0
KOG2288|consensus	274		100.0
PTZ00210	382	UDP-GlcNAc-dependent glycosyltransferase; Provisio	100.0
PF02434	252	Fringe: Fringe-like; InterPro: IPR003378 The Notch	99.93
KOG2246|consensus	364		99.88
PLN03153	537	hypothetical protein; Provisional	99.71
KOG3708|consensus	681		99.08
PF13641	228	Glyco_tranf_2_3: Glycosyltransferase like family 2	97.62
TIGR03472	373	HpnI hopanoid biosynthesis associated glycosyl tra	97.29
PF04646	255	DUF604: Protein of unknown function, DUF604; Inter	97.18
cd02520	196	Glucosylceramide_synthase Glucosylceramide synthas	97.06
PF01755	200	Glyco_transf_25: Glycosyltransferase family 25 (LP	96.88
cd04186	166	GT_2_like_c Subfamily of Glycosyltransferase Famil	96.76
cd06439	251	CESA_like_1 CESA_like_1 is a member of the cellulo	96.66
TIGR03469	384	HonB hopene-associated glycosyltransferase HpnB. T	96.56
PF13506	175	Glyco_transf_21: Glycosyl transferase family 21	96.47
cd04192	229	GT_2_like_e Subfamily of Glycosyltransferase Famil	96.36
cd02525	249	Succinoglycan_BP_ExoA ExoA is involved in the bios	96.22
cd06421	234	CESA_CelA_like CESA_CelA_like are involved in the	96.13
cd04184	202	GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot	96.1
cd02510	299	pp-GalNAc-T pp-GalNAc-T initiates the formation of	95.95
cd04196	214	GT_2_like_d Subfamily of Glycosyltransferase Famil	95.77
cd06427	241	CESA_like_2 CESA_like_2 is a member of the cellulo	95.77
PRK11204	420	N-glycosyltransferase; Provisional	95.69
cd06532	128	Glyco_transf_25 Glycosyltransferase family 25 [lip	95.4
cd06420	182	GT2_Chondriotin_Pol_N N-terminal domain of Chondro	95.3
PLN02726	243	dolichyl-phosphate beta-D-mannosyltransferase	95.18
cd04185	202	GT_2_like_b Subfamily of Glycosyltransferase Famil	95.07
TIGR03111	439	glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0	94.9
PF00535	169	Glycos_transf_2: Glycosyl transferase family 2; In	94.88
PRK14583	444	hmsR N-glycosyltransferase; Provisional	94.83
cd06434	235	GT2_HAS Hyaluronan synthases catalyze polymerizati	94.38
cd06433	202	GT_2_WfgS_like WfgS and WfeV are involved in O-ant	93.89
COG1215	439	Glycosyltransferases, probably involved in cell wa	93.83
cd04191	254	Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elon	93.11
PF13632	193	Glyco_trans_2_3: Glycosyl transferase family group	93.08
PF10111	281	Glyco_tranf_2_2: Glycosyltransferase like family 2	93.01
cd02526	237	GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr	92.92
COG1216	305	Predicted glycosyltransferases [General function p	92.69
cd04195	201	GT2_AmsE_like GT2_AmsE_like is involved in exopoly	92.56
cd06423	180	CESA_like CESA_like is the cellulose synthase supe	92.35
cd06442	224	DPM1_like DPM1_like represents putative enzymes si	92.22
cd06435	236	CESA_NdvC_like NdvC_like proteins in this family a	92.21
PRK14716	504	bacteriophage N4 adsorption protein B; Provisional	91.97
cd04187	181	DPM1_like_bac Bacterial DPM1_like enzymes are rela	89.35
TIGR01556	281	rhamnosyltran L-rhamnosyltransferase. Rhamnolipids	88.63
cd02522	221	GT_2_like_a GT_2_like_a represents a glycosyltrans	86.46
TIGR03030	713	CelA cellulose synthase catalytic subunit (UDP-for	86.09
PRK11234	727	nfrB bacteriophage N4 adsorption protein B; Provis	85.81
cd04179	185	DPM_DPG-synthase_like DPM_DPG-synthase_like is a m	85.21
cd00761	156	Glyco_tranf_GTA_type Glycosyltransferase family A	84.65
PRK05454	691	glucosyltransferase MdoH; Provisional	84.16
cd04188	211	DPG_synthase DPG_synthase is involved in protein N	83.44
PF02485	244	Branch: Core-2/I-Branching enzyme; InterPro: IPR00	82.44
cd06437	232	CESA_CaSu_A2 Cellulose synthase catalytic subunit	82.3

>KOG2287|consensus

Probab=100.00  E-value=1.2e-54  Score=383.79  Aligned_cols=241  Identities=27%  Similarity=0.364  Sum_probs=216.9

Q ss_pred             cccccCCCCCCCCCCCC--eeEEEEEeCCCCCHHHHHHHHHHHcCCcC--CCcEEEEEEeecCch--HHHHHHHHHhhhC
Q psy10879          3 ISANQTGLSKFKNLKHS--YFIVILILTSSKNYIRRKNIRDTWIKNIE--KYQVKYLFSIGNKEN--VVDVKLKEEIRRY   76 (245)
Q Consensus         3 ~~~~~~~l~~~~~c~~~--~~lli~V~S~~~~~~~R~~IR~TW~~~~~--~~~~~~~Fv~g~~~~--~~~~~l~~E~~~~   76 (245)
                      ++.....+..|+.|.+.  ++|+++|.|+++++++|++||+|||+...  +.+++.+|++|.+++  ..+..|.+|++.|
T Consensus        76 ~~~~~~~l~~p~~~~~~~~~~lLl~V~S~~~~farR~aiR~TW~~~~~v~~~~v~~~FLvG~~~~~~~~~~~l~~Ea~~y  155 (349)
T KOG2287|consen   76 FQKFFYLLYLPEICDPDRPPELLLLVKSAPDNFARRNAIRKTWGNENNVRGGRVRVLFLVGLPSNEDKLNKLLADEARLY  155 (349)
T ss_pred             hccChhhhcCChhhcCCCCceEEEEEecCCCCHHHHHHHHHHhcCccccCCCcEEEEEEecCCCcHHHHHHHHHHHHHHh
Confidence            44555667778777544  79999999999999999999999999985  788999999999983  4588999999999


Q ss_pred             CCEEEcCCccccCCchhHHHHHHHHHHHhcc-ceeEEEEecCceeeehHHHHHHHhhc-CcCCcccEEEEecCCCeeecC
Q psy10879         77 DDILLLNQVPDEYSSLSQKVLHSFKYIYEHF-DFQYLLKCDDDTFVRVPNIIHELENK-FHYEKKLYWGFFDGRARVRRA  154 (245)
Q Consensus        77 ~Dii~~~d~~d~y~~l~~K~~~~l~w~~~~~-~~~~~~k~DDD~~v~~~~L~~~L~~~-~~~~~~~y~G~~~~~~~~~r~  154 (245)
                      ||||+ .||.|+|.|+|+|+++++.|..++| +++|++|+|||+||++++|.++|... .+. +.+|+|++..+..|.|+
T Consensus       156 gDIi~-~df~Dty~nltlKtl~~l~w~~~~cp~akfi~K~DDDvfv~~~~L~~~L~~~~~~~-~~~~~G~v~~~~~p~R~  233 (349)
T KOG2287|consen  156 GDIIQ-VDFEDTYFNLTLKTLAILLWGVSKCPDAKFILKIDDDVFVNPDNLLEYLDKLNDPS-SDLYYGRVIQNAPPIRD  233 (349)
T ss_pred             CCEEE-EecccchhchHHHHHHHHHHHHhcCCcceEEEeccCceEEcHHHHHHHHhccCCCC-cceEEEeecccCCCCCC
Confidence            99995 5899999999999999999999999 99999999999999999999999999 776 89999999988888885


Q ss_pred             --CCCcccC-cccCCCCCCccCCCeeeecHHHHHHHHHhcccCCCCCCChhHHHHHHHhC-CCeEeecCCccccc-CCCC
Q psy10879        155 --GKWKEKN-WFLCDRYLPYALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSAL-DITRYHDVRFDTEF-QSRG  229 (245)
Q Consensus       155 --~k~~~~~-~~~~~~yp~y~~G~gyvlS~~~~~~l~~~~~~~~~~~~eDv~iG~~l~~~-~v~~~~~~~f~~~~-~~~~  229 (245)
                        +|||+++ .|+++.|||||+|+||++|+++|+.|++++.+.+.+.+|||++|+|+++. ||.++++++|.... ...+
T Consensus       234 ~~~KwyVp~~~y~~~~YP~Y~sG~gYvis~~~a~~l~~~s~~~~~~~iEDV~~g~~l~~~~gi~~~~~~~~~~~~~~~~~  313 (349)
T KOG2287|consen  234 KTSKWYVPESEYPCSVYPPYASGPGYVISGDAARRLLKASKHLKFFPIEDVFVGGCLAEDLGIKPVNHPGFFEIPLSFDP  313 (349)
T ss_pred             CCCCCccCHHHCCCCCCCCcCCCceeEecHHHHHHHHHHhcCCCccchHHHHHHHHHHHhcCCCcccCcccccccccCCC
Confidence              8999995 89999999999999999999999999999999999999999999999998 99999999855322 2367


Q ss_pred             cc-CCeEEEeccCCCCC
Q psy10879        230 CN-NSYLIVHKQNMHQL  245 (245)
Q Consensus       230 c~-~~~~~~h~~~p~~m  245 (245)
                      |+ .+.+++|.++|.+|
T Consensus       314 ~~~~~~~~~H~~~p~e~  330 (349)
T KOG2287|consen  314 CCYRDLLAVHRLSPNEM  330 (349)
T ss_pred             CcccceEEEecCCHHHH
Confidence            77 59999999998875

>PLN03133 beta-1,3-galactosyltransferase; Provisional

Probab=100.00  E-value=5.2e-52  Score=383.46  Aligned_cols=222  Identities=27%  Similarity=0.488  Sum_probs=197.0

Q ss_pred             CCCeeEEEEEeCCCCCHHHHHHHHHHHcCCcC--CCcEEEEEEeecCc-hHHHHHHHHHhhhCCCEEEcCCccccCCchh
Q psy10879         17 KHSYFIVILILTSSKNYIRRKNIRDTWIKNIE--KYQVKYLFSIGNKE-NVVDVKLKEEIRRYDDILLLNQVPDEYSSLS   93 (245)
Q Consensus        17 ~~~~~lli~V~S~~~~~~~R~~IR~TW~~~~~--~~~~~~~Fv~g~~~-~~~~~~l~~E~~~~~Dii~~~d~~d~y~~l~   93 (245)
                      ..+++|+|+|+|+++|+++|++||+|||+...  +..++.+|++|.+. +..+..|..|+++|||||+. ||.|+|.|+|
T Consensus       382 ~~~~~LlI~V~Sap~nf~rR~AIR~TWg~~~~~~~~~v~~rFvVG~s~n~~l~~~L~~Ea~~ygDIIq~-dF~DsY~NLT  460 (636)
T PLN03133        382 KKPLDLFIGVFSTANNFKRRMAVRRTWMQYDAVRSGAVAVRFFVGLHKNQMVNEELWNEARTYGDIQLM-PFVDYYSLIT  460 (636)
T ss_pred             CCceEEEEEEeCCcccHHHHHHHHHhhccccccCCCceEEEEEEecCCcHHHHHHHHHHHHHcCCeEEE-eeechhhhhH
Confidence            35689999999999999999999999999653  45689999999987 77889999999999999965 7999999999


Q ss_pred             HHHHHHHHHHHhcc-ceeEEEEecCceeeehHHHHHHHhhcCcCCcccEEEEecCCCeeecC--CCCccc-CcccCCCCC
Q psy10879         94 QKVLHSFKYIYEHF-DFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGFFDGRARVRRA--GKWKEK-NWFLCDRYL  169 (245)
Q Consensus        94 ~K~~~~l~w~~~~~-~~~~~~k~DDD~~v~~~~L~~~L~~~~~~~~~~y~G~~~~~~~~~r~--~k~~~~-~~~~~~~yp  169 (245)
                      +|+++++.|+. +| +++|+||+|||+|||+++|+++|...... +.+|+|++..+..|.|+  +|||++ +.|+.+.||
T Consensus       461 lKtl~~~~wa~-~c~~akFilK~DDDvFVnv~~Ll~~L~~~~~~-~~Ly~G~v~~~~~PiRd~~sKWYVs~~eyp~~~YP  538 (636)
T PLN03133        461 WKTLAICIFGT-EVVSAKYVMKTDDDAFVRVDEVLASLKRTNVS-HGLLYGLINSDSQPHRNPDSKWYISPEEWPEETYP  538 (636)
T ss_pred             HHHHHHHHHHH-hCCCceEEEEcCCceEEcHHHHHHHHHhcCCC-CceEEEEeccCCCcccCCCCCCCCCHHHCCCCCCC
Confidence            99999999985 56 99999999999999999999999877665 78999999988889986  899998 589999999


Q ss_pred             CccCCCeeeecHHHHHHHHHhc--ccCCCCCCChhHHHHHHHh---CCCeEeec--CCcccccCCCCccCCeEEEeccCC
Q psy10879        170 PYALGGGYVLSHLLVKFISENS--HMLSSYISEDVSVGVWLSA---LDITRYHD--VRFDTEFQSRGCNNSYLIVHKQNM  242 (245)
Q Consensus       170 ~y~~G~gyvlS~~~~~~l~~~~--~~~~~~~~eDv~iG~~l~~---~~v~~~~~--~~f~~~~~~~~c~~~~~~~h~~~p  242 (245)
                      |||+|+||+||+++|+.|+.++  ..++.+.+|||++|+|+..   +|+.+.+.  .+|+    .++|..++|++|+++|
T Consensus       539 pYasG~gYVlS~Dla~~L~~~s~s~~l~~f~lEDVyvGi~l~~l~k~gl~v~~~~~~r~~----~~~C~~~~i~~H~~sP  614 (636)
T PLN03133        539 PWAHGPGYVVSRDIAKEVYKRHKEGRLKMFKLEDVAMGIWIAEMKKEGLEVKYENDGRIY----NEGCKDGYVVAHYQSP  614 (636)
T ss_pred             CCCCcCEEEEcHHHHHHHHHhhhhcccCcCChhhHhHHHHHHHhcccCCCceeeCCCccc----CCcCCCCeEEEecCCH
Confidence            9999999999999999999875  4688999999999999874   46665443  3444    5789999999999999


Q ss_pred             CCC
Q psy10879        243 HQL  245 (245)
Q Consensus       243 ~~m  245 (245)
                      ++|
T Consensus       615 ~eM  617 (636)
T PLN03133        615 REM  617 (636)
T ss_pred             HHH
Confidence            987

>PLN03193 beta-1,3-galactosyltransferase; Provisional

Probab=100.00  E-value=7.9e-50  Score=350.37  Aligned_cols=225  Identities=26%  Similarity=0.421  Sum_probs=192.8

Q ss_pred             CCCCCCCeeEEEEEeCCCCCHHHHHHHHHHHcCCcC-------CCcEEEEEEeecCc---hHHHHHHHHHhhhCCCEEEc
Q psy10879         13 FKNLKHSYFIVILILTSSKNYIRRKNIRDTWIKNIE-------KYQVKYLFSIGNKE---NVVDVKLKEEIRRYDDILLL   82 (245)
Q Consensus        13 ~~~c~~~~~lli~V~S~~~~~~~R~~IR~TW~~~~~-------~~~~~~~Fv~g~~~---~~~~~~l~~E~~~~~Dii~~   82 (245)
                      +.+-+++++++|+|.|++++++||++||+||++..+       ..+++++|++|.+.   ...+..|++|+++|||||++
T Consensus       132 ~~~~~~~~~LvIgI~Sap~~~~RR~AIR~TWg~~~~~~~kle~~~gv~vrFVIG~s~~~~~~ldr~Le~Ea~~ygDIL~l  211 (408)
T PLN03193        132 QSSGKRRYLMVVGINTAFSSRKRRDSVRATWMPQGEKRKKLEEEKGIIIRFVIGHSATSGGILDRAIEAEDRKHGDFLRL  211 (408)
T ss_pred             CCCCcceEEEEEEEeCCCCCHHHHHHHHHHHcCCcccccccccCCcEEEEEEeecCCCcchHHHHHHHHHHHHhCCEEEE
Confidence            344567799999999999999999999999998642       36799999999986   46888999999999999976


Q ss_pred             CCccccCCchhHHHHHHHHHHHhccceeEEEEecCceeeehHHHHHHHhhcCcCCcccEEEEecCCCeeecC---CCCcc
Q psy10879         83 NQVPDEYSSLSQKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGFFDGRARVRRA---GKWKE  159 (245)
Q Consensus        83 ~d~~d~y~~l~~K~~~~l~w~~~~~~~~~~~k~DDD~~v~~~~L~~~L~~~~~~~~~~y~G~~~~~~~~~r~---~k~~~  159 (245)
                       |+.|+|.|++.||+++++|+.++|+++|+||+|||+|||+++|..+|...... .++|+|++..+  |.|+   .||+.
T Consensus       212 -DfvDsY~NLT~KTl~~f~wA~~~~dAkF~mK~DDDvfVnv~~L~~~L~~~~~~-~rlYiG~m~~g--Pvr~~~~~ky~e  287 (408)
T PLN03193        212 -DHVEGYLELSAKTKTYFATAVAMWDADFYVKVDDDVHVNIATLGETLVRHRKK-PRVYIGCMKSG--PVLSQKGVRYHE  287 (408)
T ss_pred             -ecccccccchHHHHHHHHHHHHcCCCeEEEEcCCCceEcHHHHHHHHHhcCCC-CCEEEEecccC--ccccCCCCcCcC
Confidence             79999999999999999999998899999999999999999999999877654 67999999764  4453   45677


Q ss_pred             cCcc----cCCCCCCccCCCeeeecHHHHHHHHHhcccCCCCCCChhHHHHHHHhCCCeEeecCCcccccCCCCcc----
Q psy10879        160 KNWF----LCDRYLPYALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRYHDVRFDTEFQSRGCN----  231 (245)
Q Consensus       160 ~~~~----~~~~yp~y~~G~gyvlS~~~~~~l~~~~~~~~~~~~eDv~iG~~l~~~~v~~~~~~~f~~~~~~~~c~----  231 (245)
                      +++|    +.+.|||||+|+||+||+++++.|+.+...++.+.+|||++|.|+.+++|+.+|+++|++. ....|.    
T Consensus       288 pe~w~~~~~~~~YPpyAsG~gYVlS~DLa~~I~~n~~~L~~y~~EDV~vG~Wl~~L~V~~vdd~~fcc~-~~~~C~~~~~  366 (408)
T PLN03193        288 PEYWKFGENGNKYFRHATGQLYAISKDLASYISINQHVLHKYANEDVSLGSWFIGLDVEHIDDRRLCCG-TPPDCEWKAQ  366 (408)
T ss_pred             cccccccCccccCCCCCCcceEEehHHHHHHHHhChhhhcccCcchhhhhhHhccCCceeeecccccCC-CCcccccccc
Confidence            7655    5689999999999999999999999999889999999999999999999999999999874 223443    


Q ss_pred             --CCeEEEeccCC
Q psy10879        232 --NSYLIVHKQNM  242 (245)
Q Consensus       232 --~~~~~~h~~~p  242 (245)
                        .-.++++.+++
T Consensus       367 ~~~~c~~~~~~~c  379 (408)
T PLN03193        367 AGNICVASFDWSC  379 (408)
T ss_pred             CCCeeEEEecccC
Confidence              12356665554

>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=100.00  E-value=4.2e-48  Score=317.37  Aligned_cols=184  Identities=33%  Similarity=0.481  Sum_probs=168.7

Q ss_pred             HHHHHHHHHHcCCcC--CCcEEEEEEeecCc---hHHHHHHHHHhhhCCCEEEcCCccccCCchhHHHHHHHHHHHhcc-
Q psy10879         34 IRRKNIRDTWIKNIE--KYQVKYLFSIGNKE---NVVDVKLKEEIRRYDDILLLNQVPDEYSSLSQKVLHSFKYIYEHF-  107 (245)
Q Consensus        34 ~~R~~IR~TW~~~~~--~~~~~~~Fv~g~~~---~~~~~~l~~E~~~~~Dii~~~d~~d~y~~l~~K~~~~l~w~~~~~-  107 (245)
                      +||++||+||++...  ..+++++|++|.++   ...+..|.+|+++|||||+. |+.|+|.|+++|++++++|+.++| 
T Consensus         1 ~rR~~IR~TW~~~~~~~~~~~~~~FvvG~~~~~~~~~~~~l~~E~~~y~Dil~~-d~~D~y~nlt~K~~~~~~w~~~~c~   79 (195)
T PF01762_consen    1 ERRQAIRETWGNQRNFKGVRVKVVFVVGESPNSDSDLQEALQEEAEKYGDILQG-DFVDSYRNLTLKTLAGLKWASKHCP   79 (195)
T ss_pred             ChHHHHHHHHhcccccCCCcEEEEEEEecCCCCcHHHHHHhhhhhhhcCceEee-ecccccchhhHHHHHHHHHHHhhCC
Confidence            489999999999874  68899999999998   45678899999999999965 899999999999999999999999 


Q ss_pred             ceeEEEEecCceeeehHHHHHHHhhc--CcCCcccEEEEecCCCeeecC--CCCccc-CcccCCCCCCccCCCeeeecHH
Q psy10879        108 DFQYLLKCDDDTFVRVPNIIHELENK--FHYEKKLYWGFFDGRARVRRA--GKWKEK-NWFLCDRYLPYALGGGYVLSHL  182 (245)
Q Consensus       108 ~~~~~~k~DDD~~v~~~~L~~~L~~~--~~~~~~~y~G~~~~~~~~~r~--~k~~~~-~~~~~~~yp~y~~G~gyvlS~~  182 (245)
                      +++|++|+|||+|||+++|.++|...  .+. ...+.|.+..+.+|.|+  +||+++ +.|+.+.|||||+|+||+||++
T Consensus        80 ~~~~v~k~DDD~~vn~~~l~~~L~~~~~~~~-~~~~~g~~~~~~~~~r~~~~kw~v~~~~y~~~~yP~y~~G~~yvls~~  158 (195)
T PF01762_consen   80 NAKYVLKVDDDVFVNPDRLVSFLKSLKQDPS-KNSIYGGCIKNGPPIRDPSSKWYVSEEEYPDDYYPPYCSGGGYVLSSD  158 (195)
T ss_pred             chhheeecCcEEEEehHHhhhhhhhcccCcc-ccccccccccCCccccccccCceeeeeecccccCCCcCCCCeEEecHH
Confidence            79999999999999999999999988  444 67888888777777775  889998 4799999999999999999999


Q ss_pred             HHHHHHHhcccCCCCCCChhHHHHHHHhCCCeEeecC
Q psy10879        183 LVKFISENSHMLSSYISEDVSVGVWLSALDITRYHDV  219 (245)
Q Consensus       183 ~~~~l~~~~~~~~~~~~eDv~iG~~l~~~~v~~~~~~  219 (245)
                      +++.|+.++..++.++.|||++|+|+.++||+++|+|
T Consensus       159 ~v~~i~~~~~~~~~~~~eDv~iGi~~~~~~i~~~~~~  195 (195)
T PF01762_consen  159 VVKRIYKASSHTPFFPLEDVFIGILAEKLGIKPIHDP  195 (195)
T ss_pred             HHHHHHHHhhcCCCCCchHHHHHHHHHHCCCCccCCC
Confidence            9999999999999999999999999999999999875

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 31 (GH31 from CAZY) comprises enzymes with a number of known activities; N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase (2.4.1.149 from EC); beta-1,3-galactosyltransferase (2.4.1 from EC); fucose-specific beta-1,3-N-acetylglucosaminyltransferase (2.4.1 from EC); globotriosylceramide beta-1,3-GalNAc transferase (2.4.1.79 from EC) [, ].; GO: 0008378 galactosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane

>KOG2288|consensus

Probab=100.00  E-value=1.6e-40  Score=271.92  Aligned_cols=207  Identities=34%  Similarity=0.562  Sum_probs=192.2

Q ss_pred             CCCeeEEEEEeCCCCCHHHHHHHHHHHcCCc------C-CCcEEEEEEeecCc--hHHHHHHHHHhhhCCCEEEcCCccc
Q psy10879         17 KHSYFIVILILTSSKNYIRRKNIRDTWIKNI------E-KYQVKYLFSIGNKE--NVVDVKLKEEIRRYDDILLLNQVPD   87 (245)
Q Consensus        17 ~~~~~lli~V~S~~~~~~~R~~IR~TW~~~~------~-~~~~~~~Fv~g~~~--~~~~~~l~~E~~~~~Dii~~~d~~d   87 (245)
                      +++++++|+|.|++....||+++|+||+...      + ..++..+|++|...  .+...+|++|.++|+|.+.+.+.+|
T Consensus         8 ~~k~l~vigI~T~f~s~~RR~~vR~TWmp~~~~l~rle~e~gv~~RFvIG~~~~g~~~~r~ie~E~~~~~DfllLd~h~E   87 (274)
T KOG2288|consen    8 RRKVLLVIGINTAFSSRKRRDSVRQTWMPSGEGLKRLEEEKGVIIRFVIGTATLGASLDRALEEENAQHGDFLLLDRHEE   87 (274)
T ss_pred             ccceEEEEEeecccchhhhHHHHHHhhcCCccchhhhccccceEEEEEeccCCccHHHHHHHHHHHHhcCCeEeechhHH
Confidence            7789999999999999999999999999993      2 67899999999955  7889999999999999999876999


Q ss_pred             cCCchhHHHHHHHHHHHhccceeEEEEecCceeeehHHHHHHHhhcCcCCcccEEEEecCCCeeec-CCCCcccCcccCC
Q psy10879         88 EYSSLSQKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGFFDGRARVRR-AGKWKEKNWFLCD  166 (245)
Q Consensus        88 ~y~~l~~K~~~~l~w~~~~~~~~~~~k~DDD~~v~~~~L~~~L~~~~~~~~~~y~G~~~~~~~~~r-~~k~~~~~~~~~~  166 (245)
                      .|.+|+.||+.++.++..+++++|++|+|||+||++..|...|...... ..+|+|.+.++..+.+ .+||+.|+|..++
T Consensus        88 ~Y~~Ls~Kt~~~f~~A~~~~daeFyvKvDDDv~v~l~~L~~~la~~r~~-pr~YiGcmksg~v~~~~~~kw~EpeWkfg~  166 (274)
T KOG2288|consen   88 AYEELSAKTKAFFSAAVAHWDAEFYVKVDDDVYVRLARLGTLLARERSH-PRLYIGCMKSGPVLTQPGGKWYEPEWKFGD  166 (274)
T ss_pred             HHHHHHHHHHHHHHHHHHhccceEEEEccccceecHHHHHHHHHhhccC-CceEEEEecCCccccCCCCcccChhhhcCc
Confidence            9999999999999999999999999999999999999999999887765 7899999998877766 6999999987766


Q ss_pred             C--CCCccCCCeeeecHHHHHHHHHhcccCCCCCCChhHHHHHHHhCCCeEeecCCcccc
Q psy10879        167 R--YLPYALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRYHDVRFDTE  224 (245)
Q Consensus       167 ~--yp~y~~G~gyvlS~~~~~~l~~~~~~~~~~~~eDv~iG~~l~~~~v~~~~~~~f~~~  224 (245)
                      .  |.+|..|++|+||++++.-|.-+.+.+..+..|||.+|.|+..++|+.+|++++++.
T Consensus       167 ~g~YfrhA~G~~YvlS~dLa~yi~in~~lL~~y~nEDVSlGaW~~gldV~h~dd~rlC~~  226 (274)
T KOG2288|consen  167 NGNYFRHATGGGYVLSKDLATYISINRQLLHKYANEDVSLGAWMIGLDVEHVDDPRLCCS  226 (274)
T ss_pred             ccccchhccCceEEeeHHHHHHHHHhHHHHHhhccCCcccceeeeeeeeeEecCCccccc
Confidence            5  999999999999999999999999999999999999999999999999999999863

>PTZ00210 UDP-GlcNAc-dependent glycosyltransferase; Provisional

Probab=100.00  E-value=2.2e-35  Score=255.76  Aligned_cols=212  Identities=25%  Similarity=0.336  Sum_probs=172.1

Q ss_pred             CCCeeEEEEEeCCCCC--HHHHHHHHHHHcCCcC--------CCcEEEEEEeecCc-h--HHHHHHHHHhhhCCCEEEcC
Q psy10879         17 KHSYFIVILILTSSKN--YIRRKNIRDTWIKNIE--------KYQVKYLFSIGNKE-N--VVDVKLKEEIRRYDDILLLN   83 (245)
Q Consensus        17 ~~~~~lli~V~S~~~~--~~~R~~IR~TW~~~~~--------~~~~~~~Fv~g~~~-~--~~~~~l~~E~~~~~Dii~~~   83 (245)
                      .++..++++|+|...+  +.||+++|+||.+-..        ...+-++|++|..+ .  +.++++.+|++.|||||.+ 
T Consensus        77 ~~~~lv~~Gi~S~d~~~r~~rR~lqr~t~w~y~~va~~~n~ftg~~lv~y~l~~H~~~~~~~~~~L~eEA~~~~DIVil-  155 (382)
T PTZ00210         77 AQRFLAVLGIPSVDNSERSRRRDLQRQTCWKYSGVATRSNNFSGSLLPLYLLAPHQSNSYLISHSLKEEAARTHDIITL-  155 (382)
T ss_pred             cCCceEEEeccCCCchHHHHHHHHHHhhhhcchhhhhhccCCchhhhhhhhhccCCccchhhhHHHHHHHHHhCCEEEE-
Confidence            3567899999999988  8889999999988752        46788899999998 4  8899999999999999976 


Q ss_pred             Cc------------------cccCCchhHHHHHHHHHHHhcc-ceeEEEEecCceeeehHHHHHHHhhcCcCCcccEEEE
Q psy10879         84 QV------------------PDEYSSLSQKVLHSFKYIYEHF-DFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGF  144 (245)
Q Consensus        84 d~------------------~d~y~~l~~K~~~~l~w~~~~~-~~~~~~k~DDD~~v~~~~L~~~L~~~~~~~~~~y~G~  144 (245)
                      +|                  .|++.++++||+++++|+.+.| +++|++|+|||+||++++++++|+....  ..+|+|+
T Consensus       156 pf~d~~~tTnKkiG~~g~WG~e~e~~mT~KT~l~~~wA~~~cP~a~YImKgDDDvFVrVp~lL~~Lr~~pr--r~LY~G~  233 (382)
T PTZ00210        156 PTNDVSPSTRKKIGENGNWGIEAEVAMSRKTYLWLRFALHMFPNVSYIVKGDDDIFIRVPKYLADLRVMPR--HGLYMGR  233 (382)
T ss_pred             ecccCccccccccccCCcccchhhcchhHHHHHHHHHHHHhCCCCCeEEEcCCCeEeeHHHHHHHHhhCCC--CceEEEe
Confidence            58                  6777889999999999999999 9999999999999999999999966654  6799999


Q ss_pred             ecCCCeeecCCCCcccCcccCCCCCCccCCCeeeecHHHHHHHHHhccc--C---------------CCCCCChhHHHHH
Q psy10879        145 FDGRARVRRAGKWKEKNWFLCDRYLPYALGGGYVLSHLLVKFISENSHM--L---------------SSYISEDVSVGVW  207 (245)
Q Consensus       145 ~~~~~~~~r~~k~~~~~~~~~~~yp~y~~G~gyvlS~~~~~~l~~~~~~--~---------------~~~~~eDv~iG~~  207 (245)
                      +.....|.|++            +||||+|+||+||+++|+.|++....  +               -.+..||+++|.+
T Consensus       234 v~~~~~p~Rd~------------~PpY~~G~gYvLSrDVA~~Lvs~~pl~rL~~~pys~~~~~~y~~~~~~~EDiMvG~v  301 (382)
T PTZ00210        234 YNYYNRIWRRN------------QLTYVNGYCITLSRDTAQAIISYKPLERLVNMPFSMWDYFDFLDLGMFYEDVMVGMI  301 (382)
T ss_pred             eCCCCccccCC------------CCCccccceeeccHHHHHHHHhhChHhHhhcCCCchHHHHHHHHhhcCchHHHHHHH
Confidence            98776666642            59999999999999999999998532  1               1246899999999


Q ss_pred             HHh-CC---CeEeec--CCcccccCCCCc----cCCeEEEeccCCCC
Q psy10879        208 LSA-LD---ITRYHD--VRFDTEFQSRGC----NNSYLIVHKQNMHQ  244 (245)
Q Consensus       208 l~~-~~---v~~~~~--~~f~~~~~~~~c----~~~~~~~h~~~p~~  244 (245)
                      |+. ++   +--+..  .+||... ...|    ..+.|++|++.++|
T Consensus       302 Lr~~~k~~~l~~V~~~~c~Fhd~~-~~~~~~~v~~~sVvvHhike~d  347 (382)
T PTZ00210        302 LREKVVYRNLISVEMGRCHFHNAG-KFGVRKSVRNMSVVIHHIQEAD  347 (382)
T ss_pred             HHHhcCcCceeeeccccccceecC-CCCCccccccceEEEEecCHHH
Confidence            964 43   223333  3555422 2233    36899999998764

>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms []

Probab=99.93  E-value=5.5e-26  Score=192.94  Aligned_cols=208  Identities=20%  Similarity=0.220  Sum_probs=111.3

Q ss_pred             eeEEEEEeCCCCCHHHHH-HHHHHHcCCcCCCcEEEEE-EeecCchHHHHHHHHHhhhCCCEEEcCCccccCCchhHHHH
Q psy10879         20 YFIVILILTSSKNYIRRK-NIRDTWIKNIEKYQVKYLF-SIGNKENVVDVKLKEEIRRYDDILLLNQVPDEYSSLSQKVL   97 (245)
Q Consensus        20 ~~lli~V~S~~~~~~~R~-~IR~TW~~~~~~~~~~~~F-v~g~~~~~~~~~l~~E~~~~~Dii~~~d~~d~y~~l~~K~~   97 (245)
                      -+|+|+|+|++++++.|. +|++||+++++    +..| +.....+    .+..+  ...+++ .+++...+...+++.+
T Consensus         6 ~dI~i~V~T~~k~h~tR~~~I~~TW~~~~~----~~~~ifsd~~d~----~l~~~--~~~~l~-~~~~~~~~~~~~~~~~   74 (252)
T PF02434_consen    6 DDIFIAVKTTKKFHKTRAPAIKQTWAKRCN----KQTFIFSDAEDP----SLPTV--TGVHLV-NPNCDAGHCRKTLSCK   74 (252)
T ss_dssp             GGEEEEEE--GGGTTTTHHHHHHTGGGGSG----GGEEEEESS--H----HHHHH--HGGGEE-E-------------HH
T ss_pred             ccEEEEEEeCHHHHHHHHHHHHHHHHhhcC----CceEEecCcccc----ccccc--cccccc-cCCCcchhhHHHHHHH
Confidence            379999999999999999 99999999994    2345 3433222    22222  233455 4555544444344444


Q ss_pred             HHHHHHHhcc-ceeEEEEecCceeeehHHHHHHHhhcCcCCcccEEEEecCCCeeecCCCCcccCcccCCCCCCc-cCCC
Q psy10879         98 HSFKYIYEHF-DFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGFFDGRARVRRAGKWKEKNWFLCDRYLPY-ALGG  175 (245)
Q Consensus        98 ~~l~w~~~~~-~~~~~~k~DDD~~v~~~~L~~~L~~~~~~~~~~y~G~~~~~~~~~r~~k~~~~~~~~~~~yp~y-~~G~  175 (245)
                      +.+.+-...- +++||+++||||||++++|.++|...+++ +++|+|+...........+.... ......| .| .||+
T Consensus        75 ~~~~y~~~~~~~~~Wf~~~DDDtyv~~~~L~~~L~~~~~~-~~~yiG~~~~~~~~~~~~~~~~~-~~~~~~~-~f~~GGa  151 (252)
T PF02434_consen   75 MAYEYDHFLNSDKDWFCFADDDTYVNVENLRRLLSKYDPS-EPIYIGRPSGDRPIEIIHRFNPN-KSKDSGF-WFATGGA  151 (252)
T ss_dssp             HHHHHHHHHHHT-SEEEEEETTEEE-HHHHHHHHTTS-TT-S--EEE-EE------------------------EE-GGG
T ss_pred             HHHHHHhhhcCCceEEEEEeCCceecHHHHHHHHhhCCCc-cCEEeeeeccCccceeecccccc-ccCcCce-EeeCCCe
Confidence            4444432223 78999999999999999999999999998 99999998654321110000000 0001112 25 5789


Q ss_pred             eeeecHHHHHHHHHhcccCC---C----CCCChhHHHHHHHh-CCCeEeecCCcccccCC-------CCccCCeEEEecc
Q psy10879        176 GYVLSHLLVKFISENSHMLS---S----YISEDVSVGVWLSA-LDITRYHDVRFDTEFQS-------RGCNNSYLIVHKQ  240 (245)
Q Consensus       176 gyvlS~~~~~~l~~~~~~~~---~----~~~eDv~iG~~l~~-~~v~~~~~~~f~~~~~~-------~~c~~~~~~~h~~  240 (245)
                      ||+|||.++++|......+.   .    -..||+.||.|+.. +||+++|.+.||...+.       .-+.+-.|++|..
T Consensus       152 G~vlSr~~~~k~~~~~~~~~~~~~~~~~~~~dD~~lG~ci~~~lgv~lt~s~~fhs~~~~l~~~~~~~l~~q~~~s~~~~  231 (252)
T PF02434_consen  152 GYVLSRALLKKMSPWASGCKCPSTDEKIRLPDDMTLGYCIENLLGVPLTHSPLFHSHLENLQDYNPETLHRQVPISYHKF  231 (252)
T ss_dssp             -EEEEHHHHHHHHHHHTT-TTS--TTTTTS-HHHHHHHHHHHTT---EEE-TT---SSS-GGG--TTTGGG-SEEE-EEE
T ss_pred             eHHHhHHHHHHHhhhcccccccCCcCCCCCcccChhhhhHHhcCCcceeechhhcccCcccccCCHHHhccCCCeecCCC
Confidence            99999999999966543222   1    24899999999999 99999999999976543       2345678888877


Q ss_pred             C
Q psy10879        241 N  241 (245)
Q Consensus       241 ~  241 (245)
                      .
T Consensus       232 ~  232 (252)
T PF02434_consen  232 E  232 (252)
T ss_dssp             T
T ss_pred             c
Confidence            3

It becomes activated when its extracellular region binds to ligands located on adjacent cells. Much of this extracellular region is composed of EGF-like repeats, many of which can be O-fucosylated. A number of these O-fucosylated repeats can in turn be further modified by the action of a beta-1,3-N-acetylglucosaminyltransferase enzyme known as Fringe []. Fringe potentiates the activation of Notch by Delta ligands, while inhibiting activation by Serrate/Jagged ligands. This regulation of Notch signalling by Fringe is important in many processes []. Four distinct Fringe proteins have so far been studied in detail; Drosophila Fringe (Dfng) and its three mammalian homologues Lunatic Fringe (Lfng), Radical Fringe (Rfng) and Manic Fringe (Mfng). Dfng, Lfng and Rfng have all been shown to play important roles in developmental processes within their host, though the phenotype of mutants can vary between species e.g. Rfng mutants are retarded in wing development in chickens, but have no obvious phenotype in mice [, , ]. Mfng mutants have not, so far, been charcterised. Biochemical studies indicate that the Fringe proteins are fucose-specific transferases requiring manganese for activity and utilising UDP-N-acetylglucosamine as a donor substrate []. The three mammalian proteins show distinct variations in their catalytic efficiencies with different substrates. Dfng is a glucosaminyltransferase that controls the response of the Notch receptor to specific ligands which is localised to the Golgi apparatus [] (not secreted as previously thought). Modification of Notch occurs through glycosylation by Dfng. This entry consists of Fringe proteins and related glycosyltransferase enzymes including: Beta-1,3-glucosyltransferase, which glucosylates O-linked fucosylglycan on thrombospondin type 1 repeat domains []. Core 1 beta1,3-galactosyltransferase 1, generates the core T antigen, which is a precursor for many extended O-glycans in glycoproteins and plays a central role in many processes, such as angiogenesis, thrombopoiesis and kidney homeostasis development []. ; GO: 0016757 transferase activity, transferring glycosyl groups, 0016020 membrane; PDB: 2J0B_A 2J0A_A.

>KOG2246|consensus

Probab=99.88  E-value=2.3e-22  Score=177.84  Aligned_cols=168  Identities=28%  Similarity=0.502  Sum_probs=135.4

Q ss_pred             CCCeeEEEEEeCCCCCHHHHH-HHHHHHcCCcCCCcEEEEEEe---ecCchHHHHHHHHHhhhCCCEEEcCCccccCCch
Q psy10879         17 KHSYFIVILILTSSKNYIRRK-NIRDTWIKNIEKYQVKYLFSI---GNKENVVDVKLKEEIRRYDDILLLNQVPDEYSSL   92 (245)
Q Consensus        17 ~~~~~lli~V~S~~~~~~~R~-~IR~TW~~~~~~~~~~~~Fv~---g~~~~~~~~~l~~E~~~~~Dii~~~d~~d~y~~l   92 (245)
                      ..+.+|+++|+|++.+...|. .+-+||+++|+    +..|+.   .+..           ..+.-|. . +..|+|+++
T Consensus        88 ~r~~~v~cwv~t~~~~~~~~~~~v~~TW~~rc~----~~~f~s~~~s~~~-----------~~f~~v~-~-~~~~g~~~~  150 (364)
T KOG2246|consen   88 SRSGRVLCWVLTSPMRHVTRADAVKETWLKRCD----KGIFFSPTLSKDD-----------SRFPTVY-Y-NLPDGYRSL  150 (364)
T ss_pred             CCCceEEEEEEecCcCceeehhhhhcccccccC----cceecCccCCCCC-----------CcCceee-c-cCCcchHHH
Confidence            567899999999999999999 99999999995    455655   3322           2222232 4 579999999


Q ss_pred             hHHHHHHHHHHHhcc--ceeEEEEecCceeeehHHHHHHHhhcCcCCcccEEEEecCCCeeecCCCCcccCcccCCCCCC
Q psy10879         93 SQKVLHSFKYIYEHF--DFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGFFDGRARVRRAGKWKEKNWFLCDRYLP  170 (245)
Q Consensus        93 ~~K~~~~l~w~~~~~--~~~~~~k~DDD~~v~~~~L~~~L~~~~~~~~~~y~G~~~~~~~~~r~~k~~~~~~~~~~~yp~  170 (245)
                      ++|+..+++++.++.  +++||+|+|||||+.++||..+|..++|+ +++|+|+......              ...|  
T Consensus       151 ~~ktr~~~~yv~~~~~~~~dWf~~aDDDTy~i~eNLr~~L~~yDp~-~p~YiG~~~~~~~--------------~~~y--  213 (364)
T KOG2246|consen  151 WRKTRIAFKYVYDHILKDYDWFLKADDDTYFIMENLRYVLSKYDPE-KPVYLGYRSKSYF--------------QNGY--  213 (364)
T ss_pred             HHHHHHHHHHHHHhccCCCCeEEeccCCeEEeHHHHHHHHhhcCCC-CcEEecccccccc--------------cccc--
Confidence            999999999999776  89999999999999999999999999999 9999998654211              1111  


Q ss_pred             ccCCCeeeecHHHHHHHHHhc----ccCCC-C--CCChhHHHHHHHhCCCeEeec
Q psy10879        171 YALGGGYVLSHLLVKFISENS----HMLSS-Y--ISEDVSVGVWLSALDITRYHD  218 (245)
Q Consensus       171 y~~G~gyvlS~~~~~~l~~~~----~~~~~-~--~~eDv~iG~~l~~~~v~~~~~  218 (245)
                      -.+|+||++|+++++.+++..    ..|+. .  ..||..||+|+..+||.+.+.
T Consensus       214 ~~g~ag~~ls~aa~~~la~~l~~~~~~C~~~~~~~~eD~~i~~Cl~~~GV~~~d~  268 (364)
T KOG2246|consen  214 SSGGAGYVLSFAALRRLAERLLNNEDKCPQRYPSYGEDRRIGRCLAEVGVPATDE  268 (364)
T ss_pred             ccCCCCcceeHHHHHHHHHHHhcchhhcccccCCchhHHHHHHHHHHhCCCccCc
Confidence            357999999999998877654    23443 2  389999999999999998876

>PLN03153 hypothetical protein; Provisional

Probab=99.71  E-value=1.1e-16  Score=144.42  Aligned_cols=180  Identities=18%  Similarity=0.177  Sum_probs=120.3

Q ss_pred             eeEEEEEeCCCCCHHHHH-HHHHHHcCCcCCCcEE-EEEEeecCchHHHHHHHHHhhhCCCEEEcCCcccc----CC---
Q psy10879         20 YFIVILILTSSKNYIRRK-NIRDTWIKNIEKYQVK-YLFSIGNKENVVDVKLKEEIRRYDDILLLNQVPDE----YS---   90 (245)
Q Consensus        20 ~~lli~V~S~~~~~~~R~-~IR~TW~~~~~~~~~~-~~Fv~g~~~~~~~~~l~~E~~~~~Dii~~~d~~d~----y~---   90 (245)
                      -.|+++|.++.+....|. .|+.+|....    ++ .+|+.....+.      .+...-.-|. +.  .|+    |.   
T Consensus       122 ~hIvF~I~~s~~~w~~R~~yik~wW~p~~----~rg~v~ld~~~~~~------~~~~~~P~i~-is--~d~s~f~y~~~~  188 (537)
T PLN03153        122 NHIMFGIAGSSQLWKRRKELVRLWWRPNQ----MRGHVWLEEQVSPE------EGDDSLPPIM-VS--EDTSRFRYTNPT  188 (537)
T ss_pred             ccEEEEEEEchhhhhhhhhhhhhhcCccc----ceeEEEecccCCCC------CCcCCCCCEE-eC--CCcccccccCCC
Confidence            389999999999887776 8999998754    22 45554433210      0001111122 21  121    22   


Q ss_pred             ch--hHHHHHHHHHHHhc-c-ceeEEEEecCceeeehHHHHHHHhhcCcCCcccEEEEecCCCeeecCCCCcccCcccCC
Q psy10879         91 SL--SQKVLHSFKYIYEH-F-DFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGFFDGRARVRRAGKWKEKNWFLCD  166 (245)
Q Consensus        91 ~l--~~K~~~~l~w~~~~-~-~~~~~~k~DDD~~v~~~~L~~~L~~~~~~~~~~y~G~~~~~~~~~r~~k~~~~~~~~~~  166 (245)
                      +.  +..+..+....... . +++||+++|||||++++||+.+|..++++ ++.|+|..........  .+         
T Consensus       189 Gh~sa~rI~rmv~et~~~~~pd~kWfVf~DDDTyf~~~NLv~~Ls~YDpt-kp~YIGs~Se~~~qn~--~f---------  256 (537)
T PLN03153        189 GHPSGLRISRIVLESFRLGLPDVRWFVLGDDDTIFNADNLVAVLSKYDPS-EMVYVGGPSESHSANS--YF---------  256 (537)
T ss_pred             CcHHHHHHHHHHHHHHHhhCCCCCEEEEecCCccccHHHHHHHHhhcCCC-CCEEeccccccccccc--cc---------
Confidence            22  22222234444444 4 89999999999999999999999999998 9999998764321100  00         


Q ss_pred             CCCCccCCCeeeecHHHHHHHHHhcccCC----CCCCChhHHHHHHHhCCCeEeecCCcccc
Q psy10879        167 RYLPYALGGGYVLSHLLVKFISENSHMLS----SYISEDVSVGVWLSALDITRYHDVRFDTE  224 (245)
Q Consensus       167 ~yp~y~~G~gyvlS~~~~~~l~~~~~~~~----~~~~eDv~iG~~l~~~~v~~~~~~~f~~~  224 (245)
                      .|--..||+||+||+.+++.|.+....|.    ....+|..||.|+..+||.+++.++||..
T Consensus       257 ~~~fA~GGAG~~LSrPLae~L~~~~d~C~~rY~~~~~gD~rL~~CL~elGV~LT~~~gfhQ~  318 (537)
T PLN03153        257 SHNMAFGGGGIAISYPLAEALSRILDDCLDRYPKLYGSDDRLHACITELGVPLSREPGFHQW  318 (537)
T ss_pred             ccccccCCceEEEcHHHHHHHHHHhhhhhhhcccCCCcHHHHHHHHHHcCCCceecCCcccc
Confidence            01013589999999999999888754332    23568999999999999999999999953

>KOG3708|consensus

Probab=99.08  E-value=1.7e-10  Score=103.43  Aligned_cols=158  Identities=13%  Similarity=0.132  Sum_probs=114.4

Q ss_pred             eeEEEEEeCCCCCHHHHHHHHHHHcCCcCCCcEEEEEEeecCchHHHHHHHHHhhhCCCEEEcCCccccCCchhHHHHHH
Q psy10879         20 YFIVILILTSSKNYIRRKNIRDTWIKNIEKYQVKYLFSIGNKENVVDVKLKEEIRRYDDILLLNQVPDEYSSLSQKVLHS   99 (245)
Q Consensus        20 ~~lli~V~S~~~~~~~R~~IR~TW~~~~~~~~~~~~Fv~g~~~~~~~~~l~~E~~~~~Dii~~~d~~d~y~~l~~K~~~~   99 (245)
                      -+|+++|+|.   ..---+|.+|-+...+    ++.||.+...-..+-+..       .++   .+.|....  ....+.
T Consensus        26 Erl~~aVmte---~tlA~a~NrT~ahhvp----rv~~F~~~~~i~~~~a~~-------~~v---s~~d~r~~--~~~s~v   86 (681)
T KOG3708|consen   26 ERLMAAVMTE---STLALAINRTLAHHVP----RVHLFADSSRIDNDLAQL-------TNV---SPYDLRGQ--KTHSMV   86 (681)
T ss_pred             HHHHHHHHHH---HHHHHHHHHHHHhhcc----eeEEeeccccccccHhhc-------ccc---CccccCcc--ccHHHH
Confidence            3778888882   2444599999999984    788888886511110000       122   23333322  445677


Q ss_pred             HHHHHhcc--ceeEEEEecCceeeehHHHHHHHhhcCcCCcccEEEEecCCCeeecCCCCcccCcccCCCCCCcc-CCCe
Q psy10879        100 FKYIYEHF--DFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGFFDGRARVRRAGKWKEKNWFLCDRYLPYA-LGGG  176 (245)
Q Consensus       100 l~w~~~~~--~~~~~~k~DDD~~v~~~~L~~~L~~~~~~~~~~y~G~~~~~~~~~r~~k~~~~~~~~~~~yp~y~-~G~g  176 (245)
                      ++++.+++  +++||+.+-|+||||...|.+++.+++.+ +++|+|.-...+               ++    =| .|.|
T Consensus        87 l~~l~~~~~~~YDwFll~~D~tYv~a~~L~~l~~hmsin-~dlymGEe~~~g---------------s~----rC~l~~G  146 (681)
T KOG3708|consen   87 LGLLFNMVHNNYDWFLLAKDSTYVNAFVLLRLIDHMSIN-EDLYMGEEAEDG---------------SG----RCRLDTG  146 (681)
T ss_pred             HHHHHHhhccccceEEEecCcceecHHHHHHHHhhcccc-cccccchhhhCc---------------cC----ccccccc
Confidence            88888888  89999999999999999999999999998 999999422211               11    16 4899


Q ss_pred             eeecHHHHHHHHHhcccCCCC---CCChhHHHHHHHhC-CCeEe
Q psy10879        177 YVLSHLLVKFISENSHMLSSY---ISEDVSVGVWLSAL-DITRY  216 (245)
Q Consensus       177 yvlS~~~~~~l~~~~~~~~~~---~~eDv~iG~~l~~~-~v~~~  216 (245)
                      |+||+.++.+|..+-..|.-+   .-+|+.+|+|+..+ ||..+
T Consensus       147 ~LLS~s~l~~lrnnle~C~~~~lsad~d~~lgrCi~~At~v~C~  190 (681)
T KOG3708|consen  147 MLLSQSLLHALRNNLEGCRNDILSADPDEWLGRCIQDATGVGCK  190 (681)
T ss_pred             eeecHHHHHHHHhhHHHhhcccccCCcHHHHHHHHHHhhcCCcc
Confidence            999999999999998766533   45789999999975 77644

>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A

Probab=97.62  E-value=0.0019  Score=53.21  Aligned_cols=189  Identities=11%  Similarity=0.052  Sum_probs=92.0

Q ss_pred             eeEEEEEeCCCCCHHHHHHHHHHHcCCcCCCcEEEEEEeecCchHHHHHHHHHhhhCCCE--EEcCCccccCCch--hHH
Q psy10879         20 YFIVILILTSSKNYIRRKNIRDTWIKNIEKYQVKYLFSIGNKENVVDVKLKEEIRRYDDI--LLLNQVPDEYSSL--SQK   95 (245)
Q Consensus        20 ~~lli~V~S~~~~~~~R~~IR~TW~~~~~~~~~~~~Fv~g~~~~~~~~~l~~E~~~~~Di--i~~~d~~d~y~~l--~~K   95 (245)
                      |.|.|+|++.-+...-++.++.--...-  .+++++++...++++..+.+.+-.+.++..  -.+..   + .+.  ..|
T Consensus         1 P~v~Vvip~~~~~~~l~~~l~sl~~~~~--~~~~v~vvd~~~~~~~~~~~~~~~~~~~~~~v~vi~~---~-~~~g~~~k   74 (228)
T PF13641_consen    1 PRVSVVIPAYNEDDVLRRCLESLLAQDY--PRLEVVVVDDGSDDETAEILRALAARYPRVRVRVIRR---P-RNPGPGGK   74 (228)
T ss_dssp             --EEEE--BSS-HHHHHHHHHHHTTSHH--HTEEEEEEEE-SSS-GCTTHHHHHHTTGG-GEEEEE--------HHHHHH
T ss_pred             CEEEEEEEecCCHHHHHHHHHHHHcCCC--CCeEEEEEECCCChHHHHHHHHHHHHcCCCceEEeec---C-CCCCcchH
Confidence            3466777776554455555555443322  235666666444433334455445556553  22211   1 221  123


Q ss_pred             HHHHHHHHHhccceeEEEEecCceeeehHHHHHHHhhc-CcCCcccEEEEecCCCe---eecCCCCc--cc--Cccc-CC
Q psy10879         96 VLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENK-FHYEKKLYWGFFDGRAR---VRRAGKWK--EK--NWFL-CD  166 (245)
Q Consensus        96 ~~~~l~w~~~~~~~~~~~k~DDD~~v~~~~L~~~L~~~-~~~~~~~y~G~~~~~~~---~~r~~k~~--~~--~~~~-~~  166 (245)
                       -.++.+..+..+.+|++.+|||+.+..+-|.+++... .+. -....|.+.....   ..+-..+.  ..  .... ..
T Consensus        75 -~~a~n~~~~~~~~d~i~~lD~D~~~~p~~l~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (228)
T PF13641_consen   75 -ARALNEALAAARGDYILFLDDDTVLDPDWLERLLAAFADPG-VGAVGGPVFPDNDRNWLTRLQDLFFARWHLRFRSGRR  152 (228)
T ss_dssp             -HHHHHHHHHH---SEEEEE-SSEEE-CHHHHHHHHHHHBSS---EEEEEEEETTCCCEEEE-TT--S-EETTTS-TT-B
T ss_pred             -HHHHHHHHHhcCCCEEEEECCCcEECHHHHHHHHHHHHhCC-CCeEeeeEeecCCCCHHHHHHHHHHhhhhhhhhhhhc
Confidence             3455666677789999999999999999888888877 443 4444455432210   01101110  00  0011 11


Q ss_pred             CCC-CccCCCeeeecHHHHHHHHHhcccCCCCCCChhHHHHHHHhCCCeEeecC
Q psy10879        167 RYL-PYALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRYHDV  219 (245)
Q Consensus       167 ~yp-~y~~G~gyvlS~~~~~~l~~~~~~~~~~~~eDv~iG~~l~~~~v~~~~~~  219 (245)
                      .+. .++.|++.++++++++.+-....   ....||..++.-+.+.|.+....+
T Consensus       153 ~~~~~~~~G~~~~~rr~~~~~~g~fd~---~~~~eD~~l~~r~~~~G~~~~~~~  203 (228)
T PF13641_consen  153 ALGVAFLSGSGMLFRRSALEEVGGFDP---FILGEDFDLCLRLRAAGWRIVYAP  203 (228)
T ss_dssp             ----S-B--TEEEEEHHHHHHH-S--S---SSSSHHHHHHHHHHHTT--EEEEE
T ss_pred             ccceeeccCcEEEEEHHHHHHhCCCCC---CCcccHHHHHHHHHHCCCcEEEEC
Confidence            111 34679999999999999864332   445699999999999988776544

>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI

Probab=97.29  E-value=0.0077  Score=54.11  Aligned_cols=192  Identities=15%  Similarity=0.159  Sum_probs=106.6

Q ss_pred             CCeeEEEEEeCCCCCHHHHHHHHHHHcCCcCCCcEEEEEEeecCchHHHHHHHHHhhhCCC--EEEcCCccccCCchhHH
Q psy10879         18 HSYFIVILILTSSKNYIRRKNIRDTWIKNIEKYQVKYLFSIGNKENVVDVKLKEEIRRYDD--ILLLNQVPDEYSSLSQK   95 (245)
Q Consensus        18 ~~~~lli~V~S~~~~~~~R~~IR~TW~~~~~~~~~~~~Fv~g~~~~~~~~~l~~E~~~~~D--ii~~~d~~d~y~~l~~K   95 (245)
                      ..+.+-|+|++.-+...-.+.++ +..++. ....+++++.+.+.+...+.+++-.+.|.+  +..+.+-..  .....|
T Consensus        39 ~~p~VSViiP~~nee~~l~~~L~-Sl~~q~-Yp~~EIivvdd~s~D~t~~iv~~~~~~~p~~~i~~v~~~~~--~G~~~K  114 (373)
T TIGR03472        39 AWPPVSVLKPLHGDEPELYENLA-SFCRQD-YPGFQMLFGVQDPDDPALAVVRRLRADFPDADIDLVIDARR--HGPNRK  114 (373)
T ss_pred             CCCCeEEEEECCCCChhHHHHHH-HHHhcC-CCCeEEEEEeCCCCCcHHHHHHHHHHhCCCCceEEEECCCC--CCCChH
Confidence            34556677776655544455554 444443 223678877665553222333333456665  432211111  122246


Q ss_pred             HHHHHHHHHhccceeEEEEecCceeeehHHHHHHHhhcCcCCcccEEEEecCCCeeecCCCCc------cc-Cccc----
Q psy10879         96 VLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGFFDGRARVRRAGKWK------EK-NWFL----  164 (245)
Q Consensus        96 ~~~~l~w~~~~~~~~~~~k~DDD~~v~~~~L~~~L~~~~~~~~~~y~G~~~~~~~~~r~~k~~------~~-~~~~----  164 (245)
                      .-...+ +.+..+.+|++..|+|+.+..+-|...+.....++-.+..|.....  +.. +-|.      .. .+++    
T Consensus       115 ~~~l~~-~~~~a~ge~i~~~DaD~~~~p~~L~~lv~~~~~~~v~~V~~~~~~~--~~~-~~~~~l~~~~~~~~~~~~~~~  190 (373)
T TIGR03472       115 VSNLIN-MLPHARHDILVIADSDISVGPDYLRQVVAPLADPDVGLVTCLYRGR--PVP-GFWSRLGAMGINHNFLPSVMV  190 (373)
T ss_pred             HHHHHH-HHHhccCCEEEEECCCCCcChhHHHHHHHHhcCCCcceEeccccCC--CCC-CHHHHHHHHHhhhhhhHHHHH
Confidence            655544 4466799999999999999999988888776432122333321111  111 1010      00 0111    


Q ss_pred             --CCCCCCccCCCeeeecHHHHHHHHHhcccCCCCCCChhHHHHHHHhCCCeEeec
Q psy10879        165 --CDRYLPYALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRYHD  218 (245)
Q Consensus       165 --~~~yp~y~~G~gyvlS~~~~~~l~~~~~~~~~~~~eDv~iG~~l~~~~v~~~~~  218 (245)
                        ...-+.+|.|+++++.|++++.+--... ......||..+|.-+.+.|.+..-.
T Consensus       191 ~~~~~~~~~~~G~~~a~RR~~l~~iGGf~~-~~~~~~ED~~l~~~i~~~G~~v~~~  245 (373)
T TIGR03472       191 ARALGRARFCFGATMALRRATLEAIGGLAA-LAHHLADDYWLGELVRALGLRVVLA  245 (373)
T ss_pred             HHhccCCccccChhhheeHHHHHHcCChHH-hcccchHHHHHHHHHHHcCCeEEec
Confidence              0011245889999999999998754432 1222359999999999988776543

This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano

>PF04646 DUF604: Protein of unknown function, DUF604; InterPro: IPR006740 This family includes a conserved region found in several uncharacterised plant proteins

Probab=97.18  E-value=0.00063  Score=57.12  Aligned_cols=52  Identities=17%  Similarity=0.265  Sum_probs=44.5

Q ss_pred             cCCCeeeecHHHHHHHHHhcccC----CCCCCChhHHHHHHHhCCCeEeecCCccc
Q psy10879        172 ALGGGYVLSHLLVKFISENSHML----SSYISEDVSVGVWLSALDITRYHDVRFDT  223 (245)
Q Consensus       172 ~~G~gyvlS~~~~~~l~~~~~~~----~~~~~eDv~iG~~l~~~~v~~~~~~~f~~  223 (245)
                      .||+|+.||..+++.|.+....|    +.+.-.|-.|..|+..+||.++..++||.
T Consensus        11 fGGgG~~iS~pLa~~L~~~~d~C~~r~~~~~g~D~~i~~C~~~lgv~LT~e~g~hQ   66 (255)
T PF04646_consen   11 FGGGGFAISYPLAKALAKMQDDCIERYPHLYGGDQRIQACIAELGVPLTKEPGFHQ   66 (255)
T ss_pred             ccCceeEEcHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHhCCCceecCCcee
Confidence            48999999999999999875432    44556899999999999999999999995

>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis

Probab=97.06  E-value=0.06  Score=43.40  Aligned_cols=139  Identities=18%  Similarity=0.191  Sum_probs=84.6

Q ss_pred             EEEEEEeecCchHHHHHHHHHhhhCC--CEEEcCCccccCCchhHHHHHHHHHHHhccceeEEEEecCceeeehHHHHHH
Q psy10879         52 VKYLFSIGNKENVVDVKLKEEIRRYD--DILLLNQVPDEYSSLSQKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHE  129 (245)
Q Consensus        52 ~~~~Fv~g~~~~~~~~~l~~E~~~~~--Dii~~~d~~d~y~~l~~K~~~~l~w~~~~~~~~~~~k~DDD~~v~~~~L~~~  129 (245)
                      +++++|...+.+...+.+++-.+.+.  ++..+..-...  ....|.- .+....+..+.+|++..|+|+.+..+-|...
T Consensus        31 ~eiivVdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~-~~n~g~~~a~~d~i~~~D~D~~~~~~~l~~l  107 (196)
T cd02520          31 YEILFCVQDEDDPAIPVVRKLIAKYPNVDARLLIGGEKV--GINPKVN-NLIKGYEEARYDILVISDSDISVPPDYLRRM  107 (196)
T ss_pred             eEEEEEeCCCcchHHHHHHHHHHHCCCCcEEEEecCCcC--CCCHhHH-HHHHHHHhCCCCEEEEECCCceEChhHHHHH
Confidence            67777776666333444444455554  33212111111  1223432 2344455668999999999999988888877


Q ss_pred             HhhcCcCCcccEEEEecCCCeeecCCCCcccCcccCCCCCCccCCCeeeecHHHHHHHHHhcccCCCCCCChhHHHHHHH
Q psy10879        130 LENKFHYEKKLYWGFFDGRARVRRAGKWKEKNWFLCDRYLPYALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLS  209 (245)
Q Consensus       130 L~~~~~~~~~~y~G~~~~~~~~~r~~k~~~~~~~~~~~yp~y~~G~gyvlS~~~~~~l~~~~~~~~~~~~eDv~iG~~l~  209 (245)
                      +.......-.+..|.                          ++.|++.++.+++++++-.... ......||..++.-+.
T Consensus       108 ~~~~~~~~~~~v~~~--------------------------~~~g~~~~~r~~~~~~~ggf~~-~~~~~~eD~~l~~rl~  160 (196)
T cd02520         108 VAPLMDPGVGLVTCL--------------------------CAFGKSMALRREVLDAIGGFEA-FADYLAEDYFLGKLIW  160 (196)
T ss_pred             HHHhhCCCCCeEEee--------------------------cccCceeeeEHHHHHhccChHH-HhHHHHHHHHHHHHHH
Confidence            766432202222221                          5678999999999998743321 2223469999999999


Q ss_pred             hCCCeEeecCC
Q psy10879        210 ALDITRYHDVR  220 (245)
Q Consensus       210 ~~~v~~~~~~~  220 (245)
                      ..|.+....+.
T Consensus       161 ~~G~~i~~~~~  171 (196)
T cd02520         161 RLGYRVVLSPY  171 (196)
T ss_pred             HcCCeEEEcch
Confidence            88877765544

UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.

>PF01755 Glyco_transf_25: Glycosyltransferase family 25 (LPS biosynthesis protein); InterPro: IPR002654 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=96.88  E-value=0.026  Score=45.89  Aligned_cols=160  Identities=17%  Similarity=0.192  Sum_probs=80.1

Q ss_pred             EEEeCCCCCHHHHHHHHHHHcCCcCCCcEEEEEEeecCc---hH--HHHHHHHHhhh--CCCEEEcCCccccCCchhHHH
Q psy10879         24 ILILTSSKNYIRRKNIRDTWIKNIEKYQVKYLFSIGNKE---NV--VDVKLKEEIRR--YDDILLLNQVPDEYSSLSQKV   96 (245)
Q Consensus        24 i~V~S~~~~~~~R~~IR~TW~~~~~~~~~~~~Fv~g~~~---~~--~~~~l~~E~~~--~~Dii~~~d~~d~y~~l~~K~   96 (245)
                      |.|.|-+...+||+.+.+......    +.+-|+-|-..   ..  .......+...  ++-.+     .-+.-.-++-.
T Consensus         4 i~vInL~~~~~Rr~~~~~~~~~~~----~~~e~~~Avdg~~l~~~~~~~~~~~~~~~~~~~~~l-----t~gEiGC~lSH   74 (200)
T PF01755_consen    4 IYVINLDRSTERRERIQQQLAKLG----INFEFFDAVDGRDLSEDELFRRYDPELFKKRYGRPL-----TPGEIGCALSH   74 (200)
T ss_pred             EEEEECCCCHHHHHHHHHHHHHcC----CceEEEEeecccccchHHHHHHhhhhhhhccccccC-----CcceEeehhhH
Confidence            557778888999998888777653    34555544433   11  11111111111  11111     11222234556


Q ss_pred             HHHHHHHHhccceeEEEEecCceeeehHHHHHHHhhc----CcCCcccEEEEecCCC--e----e-------ecCCCCcc
Q psy10879         97 LHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENK----FHYEKKLYWGFFDGRA--R----V-------RRAGKWKE  159 (245)
Q Consensus        97 ~~~l~w~~~~~~~~~~~k~DDD~~v~~~~L~~~L~~~----~~~~~~~y~G~~~~~~--~----~-------~r~~k~~~  159 (245)
                      +..|+-+.+. +.++.+...||+.+..+ +...|...    ... .-+..|......  .    .       .+..++..
T Consensus        75 ~~~w~~~v~~-~~~~~lIlEDDv~~~~~-f~~~l~~~~~~~~~~-~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (200)
T PF01755_consen   75 IKAWQRIVDS-GLEYALILEDDVIFDPD-FKEFLEEILSHIPDW-DFLRLGGWKDNSYSPGDIFLSRLSTFLSRSKRYKR  151 (200)
T ss_pred             HHHHHHHHHc-CCCeEEEEecccccccc-HHHHHHHHHhhcccc-cchhhccccccccccccccceeeeehhhhhhhccc
Confidence            6677666533 57899999999999864 44444332    221 233333221100  0    0       00000000


Q ss_pred             cCc--c-cCC--CCCC-ccCCCeeeecHHHHHHHHHhcccCC
Q psy10879        160 KNW--F-LCD--RYLP-YALGGGYVLSHLLVKFISENSHMLS  195 (245)
Q Consensus       160 ~~~--~-~~~--~yp~-y~~G~gyvlS~~~~~~l~~~~~~~~  195 (245)
                      ...  + ...  .... .++.+||++|+..|++|++......
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~t~aY~Is~~gA~kLL~~~~~~~  193 (200)
T PF01755_consen  152 KPIPPFGSRKLIRPAKYPYGTCAYLISRKGARKLLEASKPIR  193 (200)
T ss_pred             CcccccCCceEEeecCCCCcceeeeeCHHHHHHHHHhCcCCC
Confidence            000  0 000  1112 3567899999999999999985433

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 25 GT25 from CAZY comprises enzymes with only one known activity; as a lipopolysaccharide biosynthesis protein. These enzymes catalyse the transfer of various sugars onto the growing lipopolysaccharide chain during its biosynthesis [].; GO: 0009103 lipopolysaccharide biosynthetic process

>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=96.76  E-value=0.11  Score=39.67  Aligned_cols=90  Identities=12%  Similarity=-0.006  Sum_probs=61.7

Q ss_pred             hccceeEEEEecCceeeehHHHHHHHhhcCcCCcccEEEEecCCCeeecCCCCcccCcccCCCCCCccCCCeeeecHHHH
Q psy10879        105 EHFDFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGFFDGRARVRRAGKWKEKNWFLCDRYLPYALGGGYVLSHLLV  184 (245)
Q Consensus       105 ~~~~~~~~~k~DDD~~v~~~~L~~~L~~~~~~~~~~y~G~~~~~~~~~r~~k~~~~~~~~~~~yp~y~~G~gyvlS~~~~  184 (245)
                      +..+.+|++..|||..+..+.+..++...........+|..                          +.|++.+++++++
T Consensus        71 ~~~~~~~i~~~D~D~~~~~~~l~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~  124 (166)
T cd04186          71 REAKGDYVLLLNPDTVVEPGALLELLDAAEQDPDVGIVGPK--------------------------VSGAFLLVRREVF  124 (166)
T ss_pred             hhCCCCEEEEECCCcEECccHHHHHHHHHHhCCCceEEEcc--------------------------CceeeEeeeHHHH
Confidence            33489999999999999988888888754332022222211                          5788999999999


Q ss_pred             HHHHHhcccCCCCCCChhHHHHHHHhCCCeEeecCCc
Q psy10879        185 KFISENSHMLSSYISEDVSVGVWLSALDITRYHDVRF  221 (245)
Q Consensus       185 ~~l~~~~~~~~~~~~eDv~iG~~l~~~~v~~~~~~~f  221 (245)
                      +.+-........ ..||..+..-+...|.+....+..
T Consensus       125 ~~~~~~~~~~~~-~~eD~~~~~~~~~~g~~i~~~~~~  160 (166)
T cd04186         125 EEVGGFDEDFFL-YYEDVDLCLRARLAGYRVLYVPQA  160 (166)
T ss_pred             HHcCCCChhhhc-cccHHHHHHHHHHcCCeEEEccce
Confidence            876433322222 679999988777778877666543

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily

Probab=96.66  E-value=0.053  Score=45.23  Aligned_cols=190  Identities=9%  Similarity=0.015  Sum_probs=98.5

Q ss_pred             CCCCeeEEEEEeCCCCCHHHHHHHHHHHcCCcCCCcEEEEEEeecCchHHHHHHHHHhhhCCCEEEcCCccccCCchhHH
Q psy10879         16 LKHSYFIVILILTSSKNYIRRKNIRDTWIKNIEKYQVKYLFSIGNKENVVDVKLKEEIRRYDDILLLNQVPDEYSSLSQK   95 (245)
Q Consensus        16 c~~~~~lli~V~S~~~~~~~R~~IR~TW~~~~~~~~~~~~Fv~g~~~~~~~~~l~~E~~~~~Dii~~~d~~d~y~~l~~K   95 (245)
                      ....+.+-|+|++.-+...-...|+.-..+.......+++++...+.+...+.+.+..+.  .+..+.. .   .|. .|
T Consensus        25 ~~~~~~isVvip~~n~~~~l~~~l~si~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~--~v~~i~~-~---~~~-g~   97 (251)
T cd06439          25 PAYLPTVTIIIPAYNEEAVIEAKLENLLALDYPRDRLEIIVVSDGSTDGTAEIAREYADK--GVKLLRF-P---ERR-GK   97 (251)
T ss_pred             CCCCCEEEEEEecCCcHHHHHHHHHHHHhCcCCCCcEEEEEEECCCCccHHHHHHHHhhC--cEEEEEc-C---CCC-Ch
Confidence            344556777777765544445566655554432223566666544443323333322222  2332321 1   111 22


Q ss_pred             HHHHHHHHHhccceeEEEEecCceeeehHHHHHHHhhcCcCCcccEEEEecCCCee--ecCC--CCcccC----cccCCC
Q psy10879         96 VLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGFFDGRARV--RRAG--KWKEKN----WFLCDR  167 (245)
Q Consensus        96 ~~~~l~w~~~~~~~~~~~k~DDD~~v~~~~L~~~L~~~~~~~~~~y~G~~~~~~~~--~r~~--k~~~~~----~~~~~~  167 (245)
                      . ..+....+..+.+|++.+|+|+.+..+-|.+++.........+..|........  .+..  .|....    ......
T Consensus        98 ~-~a~n~gi~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (251)
T cd06439          98 A-AALNRALALATGEIVVFTDANALLDPDALRLLVRHFADPSVGAVSGELVIVDGGGSGSGEGLYWKYENWLKRAESRLG  176 (251)
T ss_pred             H-HHHHHHHHHcCCCEEEEEccccCcCHHHHHHHHHHhcCCCccEEEeEEEecCCcccchhHHHHHHHHHHHHHHHHhcC
Confidence            2 344455555667999999999999987788877776533134555554321110  0100  011000    000011


Q ss_pred             CCCccCCCeeeecHHHHHHHHHhcccCCCCCCChhHHHHHHHhCCCeEeecC
Q psy10879        168 YLPYALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRYHDV  219 (245)
Q Consensus       168 yp~y~~G~gyvlS~~~~~~l~~~~~~~~~~~~eDv~iG~~l~~~~v~~~~~~  219 (245)
                      ....+.|+++.+.+++++      ........||..++.-+...|......+
T Consensus       177 ~~~~~~g~~~~~rr~~~~------~~~~~~~~eD~~l~~~~~~~G~~~~~~~  222 (251)
T cd06439         177 STVGANGAIYAIRRELFR------PLPADTINDDFVLPLRIARQGYRVVYEP  222 (251)
T ss_pred             CeeeecchHHHhHHHHhc------CCCcccchhHHHHHHHHHHcCCeEEecc
Confidence            122356777777777766      1122335799999988888887665544

This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.

>TIGR03469 HonB hopene-associated glycosyltransferase HpnB

Probab=96.56  E-value=0.39  Score=43.32  Aligned_cols=190  Identities=11%  Similarity=0.046  Sum_probs=96.7

Q ss_pred             CeeEEEEEeCCCCCHHHHHHHHHHHcCCcCCCcEEEEEEeecCchHHHHHHHHHhhhCC---CEEEcCCccccCCchhHH
Q psy10879         19 SYFIVILILTSSKNYIRRKNIRDTWIKNIEKYQVKYLFSIGNKENVVDVKLKEEIRRYD---DILLLNQVPDEYSSLSQK   95 (245)
Q Consensus        19 ~~~lli~V~S~~~~~~~R~~IR~TW~~~~~~~~~~~~Fv~g~~~~~~~~~l~~E~~~~~---Dii~~~d~~d~y~~l~~K   95 (245)
                      .+.+-|+|++.-+...-.+.++.--.+.- ....+++++-+.+.+...+.+++-.+++.   .+..+. ..+.-.+-..|
T Consensus        39 ~p~VSVIIpa~Ne~~~L~~~L~sL~~q~y-p~~~eIIVVDd~StD~T~~i~~~~~~~~~~~~~i~vi~-~~~~~~g~~Gk  116 (384)
T TIGR03469        39 WPAVVAVVPARNEADVIGECVTSLLEQDY-PGKLHVILVDDHSTDGTADIARAAARAYGRGDRLTVVS-GQPLPPGWSGK  116 (384)
T ss_pred             CCCEEEEEecCCcHhHHHHHHHHHHhCCC-CCceEEEEEeCCCCCcHHHHHHHHHHhcCCCCcEEEec-CCCCCCCCcch
Confidence            44566666665444333444443333222 22356666655554332233332233343   344332 12211222234


Q ss_pred             H---HHHHHHHHhcc-ceeEEEEecCceeeehHHHHHHHhhcCcCCcccEEEEecCCCeeecCCCCc---cc-------C
Q psy10879         96 V---LHSFKYIYEHF-DFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGFFDGRARVRRAGKWK---EK-------N  161 (245)
Q Consensus        96 ~---~~~l~w~~~~~-~~~~~~k~DDD~~v~~~~L~~~L~~~~~~~~~~y~G~~~~~~~~~r~~k~~---~~-------~  161 (245)
                      .   -.+++.+.+.. +.+|++..|+|+.+..+.|.+.+.........+..|.....    ..+.|.   .+       .
T Consensus       117 ~~A~n~g~~~A~~~~~~gd~llflDaD~~~~p~~l~~lv~~~~~~~~~~vs~~~~~~----~~~~~~~~~~~~~~~~~~~  192 (384)
T TIGR03469       117 LWAVSQGIAAARTLAPPADYLLLTDADIAHGPDNLARLVARARAEGLDLVSLMVRLR----CESFWEKLLIPAFVFFFQK  192 (384)
T ss_pred             HHHHHHHHHHHhccCCCCCEEEEECCCCCCChhHHHHHHHHHHhCCCCEEEeccccc----CCCHHHHHHHHHHHHHHHH
Confidence            3   33444444344 48999999999999998888888765433123333322110    001010   00       0


Q ss_pred             ccc------CCCCCCccCCCeeeecHHHHHHHHHhcccCCCCCCChhHHHHHHHhCCCeE
Q psy10879        162 WFL------CDRYLPYALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITR  215 (245)
Q Consensus       162 ~~~------~~~yp~y~~G~gyvlS~~~~~~l~~~~~~~~~~~~eDv~iG~~l~~~~v~~  215 (245)
                      .++      ......++.|++.++++++.+++--.... .....||+.++.-+++.|-+.
T Consensus       193 ~~~~~~~~~~~~~~~~~~G~~~lirr~~~~~vGGf~~~-~~~~~ED~~L~~r~~~~G~~v  251 (384)
T TIGR03469       193 LYPFRWVNDPRRRTAAAAGGCILIRREALERIGGIAAI-RGALIDDCTLAAAVKRSGGRI  251 (384)
T ss_pred             hcchhhhcCCCccceeecceEEEEEHHHHHHcCCHHHH-hhCcccHHHHHHHHHHcCCcE
Confidence            000      00111245699999999999987333221 122579999999999887443

This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.

>PF13506 Glyco_transf_21: Glycosyl transferase family 21

Probab=96.47  E-value=0.007  Score=48.59  Aligned_cols=123  Identities=19%  Similarity=0.175  Sum_probs=80.1

Q ss_pred             HHHHHHHHHHHhccceeEEEEecCceeeehHHHHHHHhhcCcCCcccEEEEecCCCeeecCCCCc------c---cCccc
Q psy10879         94 QKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGFFDGRARVRRAGKWK------E---KNWFL  164 (245)
Q Consensus        94 ~K~~~~l~w~~~~~~~~~~~k~DDD~~v~~~~L~~~L~~~~~~~~~~y~G~~~~~~~~~r~~k~~------~---~~~~~  164 (245)
                      .|.-.+...+....++++++..|+|+.|..+-|.+.+.....+.-.+..|... .. +.+ +-|.      .   +..+.
T Consensus        17 ~Kv~nL~~~~~~~a~~d~~~~~DsDi~v~p~~L~~lv~~l~~p~vglVt~~~~-~~-~~~-~~~~~l~~~~~~~~~~~~~   93 (175)
T PF13506_consen   17 PKVNNLAQGLEAGAKYDYLVISDSDIRVPPDYLRELVAPLADPGVGLVTGLPR-GV-PAR-GFWSRLEAAFFNFLPGVLQ   93 (175)
T ss_pred             hHHHHHHHHHHhhCCCCEEEEECCCeeECHHHHHHHHHHHhCCCCcEEEeccc-cc-CCc-CHHHHHHHHHHhHHHHHHH
Confidence            67777777765435999999999999999999999988765421333333221 11 111 1111      0   01110


Q ss_pred             CCCCCCccCCCeeeecHHHHHHHHHhcccCCCCCCChhHHHHHHHhCCCeEeecCC
Q psy10879        165 CDRYLPYALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRYHDVR  220 (245)
Q Consensus       165 ~~~yp~y~~G~gyvlS~~~~~~l~~~~~~~~~~~~eDv~iG~~l~~~~v~~~~~~~  220 (245)
                      .-.-.++|.|+++++.+++++.+- ........-.||..+|..+.+.|.+..-.+.
T Consensus        94 a~~~~~~~~G~~m~~rr~~L~~~G-G~~~l~~~ladD~~l~~~~~~~G~~v~~~~~  148 (175)
T PF13506_consen   94 ALGGAPFAWGGSMAFRREALEEIG-GFEALADYLADDYALGRRLRARGYRVVLSPY  148 (175)
T ss_pred             HhcCCCceecceeeeEHHHHHHcc-cHHHHhhhhhHHHHHHHHHHHCCCeEEEcch
Confidence            112356889999999999998762 1122334568999999999999988776653

>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=96.36  E-value=0.15  Score=41.50  Aligned_cols=156  Identities=10%  Similarity=-0.068  Sum_probs=80.9

Q ss_pred             EEEEEEeecCchHHHHHHH-HHhhhCCCEEEcCCccccCCchhHHHHHHHHHHHhccceeEEEEecCceeeehHHHHHHH
Q psy10879         52 VKYLFSIGNKENVVDVKLK-EEIRRYDDILLLNQVPDEYSSLSQKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHEL  130 (245)
Q Consensus        52 ~~~~Fv~g~~~~~~~~~l~-~E~~~~~Dii~~~d~~d~y~~l~~K~~~~l~w~~~~~~~~~~~k~DDD~~v~~~~L~~~L  130 (245)
                      ++++.+-+.+.+...+.+. .....+..+..+. ... ..+. .|. .++.+..+++..+|++.+|+|..+..+-|.+++
T Consensus        29 ~eiivvdd~s~d~t~~~~~~~~~~~~~~v~~~~-~~~-~~~~-g~~-~a~n~g~~~~~~d~i~~~D~D~~~~~~~l~~l~  104 (229)
T cd04192          29 FEVILVDDHSTDGTVQILEFAAAKPNFQLKILN-NSR-VSIS-GKK-NALTTAIKAAKGDWIVTTDADCVVPSNWLLTFV  104 (229)
T ss_pred             eEEEEEcCCCCcChHHHHHHHHhCCCcceEEee-ccC-cccc-hhH-HHHHHHHHHhcCCEEEEECCCcccCHHHHHHHH
Confidence            5666665554433333333 2222233444442 222 1221 222 445666667789999999999999988888877


Q ss_pred             hhcCcCCcccEEEEecCCCeeecC-CCCcc-----c----CcccCCCCCCccCCCeeeecHHHHHHHHHhcccCCCCCCC
Q psy10879        131 ENKFHYEKKLYWGFFDGRARVRRA-GKWKE-----K----NWFLCDRYLPYALGGGYVLSHLLVKFISENSHMLSSYISE  200 (245)
Q Consensus       131 ~~~~~~~~~~y~G~~~~~~~~~r~-~k~~~-----~----~~~~~~~yp~y~~G~gyvlS~~~~~~l~~~~~~~~~~~~e  200 (245)
                      ..........+.|..... .+... ..+..     .    ........+..+.|+++++++++++++--.... .....|
T Consensus       105 ~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~~ggf~~~-~~~~~e  182 (229)
T cd04192         105 AFIQKEQIGLVAGPVIYF-KGKSLLAKFQRLDWLSLLGLIAGSFGLGKPFMCNGANMAYRKEAFFEVGGFEGN-DHIASG  182 (229)
T ss_pred             HHhhcCCCcEEeeeeeec-CCccHHHHHHHHHHHHHHHHHhhHHHhcCccccccceEEEEHHHHHHhcCCccc-cccccC
Confidence            754433144566654322 11000 00000     0    001112344456799999999999987543322 234456


Q ss_pred             hhHHHHHHHhCCC
Q psy10879        201 DVSVGVWLSALDI  213 (245)
Q Consensus       201 Dv~iG~~l~~~~v  213 (245)
                      |..++.-+...|.
T Consensus       183 D~~~~~~~~~~g~  195 (229)
T cd04192         183 DDELLLAKVASKY  195 (229)
T ss_pred             CHHHHHHHHHhCC
Confidence            6666544444444

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan

Probab=96.22  E-value=0.55  Score=38.66  Aligned_cols=162  Identities=8%  Similarity=-0.029  Sum_probs=86.1

Q ss_pred             CcEEEEEEeecCchHHHHHHHHHhhhCCCEEEcCCccccCCchhHHHHHHHHHHHhccceeEEEEecCceeeehHHHHHH
Q psy10879         50 YQVKYLFSIGNKENVVDVKLKEEIRRYDDILLLNQVPDEYSSLSQKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHE  129 (245)
Q Consensus        50 ~~~~~~Fv~g~~~~~~~~~l~~E~~~~~Dii~~~d~~d~y~~l~~K~~~~l~w~~~~~~~~~~~k~DDD~~v~~~~L~~~  129 (245)
                      ...+++.+-+.+.++....+++..+++..+.++.+ ..  .+.    -.++....+..+.+|++.+|+|..+...-|.+.
T Consensus        30 ~~~evivvd~~s~d~~~~~~~~~~~~~~~v~~i~~-~~--~~~----~~a~N~g~~~a~~d~v~~lD~D~~~~~~~l~~~  102 (249)
T cd02525          30 DLIEIIVVDGGSTDGTREIVQEYAAKDPRIRLIDN-PK--RIQ----SAGLNIGIRNSRGDIIIRVDAHAVYPKDYILEL  102 (249)
T ss_pred             CccEEEEEeCCCCccHHHHHHHHHhcCCeEEEEeC-CC--CCc----hHHHHHHHHHhCCCEEEEECCCccCCHHHHHHH
Confidence            34566666555544444444444445444554322 11  111    134555555558999999999999988878887


Q ss_pred             HhhcCcCCcccEEEEecCC-Ceeec-------CCCCccc-CcccCCCC--CCccCCCeeeecHHHHHHHHHhcccCCCCC
Q psy10879        130 LENKFHYEKKLYWGFFDGR-ARVRR-------AGKWKEK-NWFLCDRY--LPYALGGGYVLSHLLVKFISENSHMLSSYI  198 (245)
Q Consensus       130 L~~~~~~~~~~y~G~~~~~-~~~~r-------~~k~~~~-~~~~~~~y--p~y~~G~gyvlS~~~~~~l~~~~~~~~~~~  198 (245)
                      +.........+..|..... ..+..       ...+... ..+.....  -.++.|++.++++++++++--...  ....
T Consensus       103 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~  180 (249)
T cd02525         103 VEALKRTGADNVGGPMETIGESKFQKAIAVAQSSPLGSGGSAYRGGAVKIGYVDTVHHGAYRREVFEKVGGFDE--SLVR  180 (249)
T ss_pred             HHHHhcCCCCEEecceecCCCChHHHHHHHHhhchhccCCccccccccccccccccccceEEHHHHHHhCCCCc--ccCc
Confidence            7654432133444543211 11100       0000000 00000000  114568888999999887643222  2234


Q ss_pred             CChhHHHHHHHhCCCeEeecCC
Q psy10879        199 SEDVSVGVWLSALDITRYHDVR  220 (245)
Q Consensus       199 ~eDv~iG~~l~~~~v~~~~~~~  220 (245)
                      .||..++.-+.+.|.+....+.
T Consensus       181 ~eD~~l~~r~~~~G~~~~~~~~  202 (249)
T cd02525         181 NEDAELNYRLRKAGYKIWLSPD  202 (249)
T ss_pred             cchhHHHHHHHHcCcEEEEcCC
Confidence            6999998777877877665543

Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.

>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose

Probab=96.13  E-value=0.18  Score=41.29  Aligned_cols=115  Identities=13%  Similarity=0.005  Sum_probs=66.8

Q ss_pred             HHHHhccceeEEEEecCceeeehHHHHHHHhhcCcCCcc-cEEEEecC-CCeee-cCCC-Cccc-Ccc-----cC--CCC
Q psy10879        101 KYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHYEKK-LYWGFFDG-RARVR-RAGK-WKEK-NWF-----LC--DRY  168 (245)
Q Consensus       101 ~w~~~~~~~~~~~k~DDD~~v~~~~L~~~L~~~~~~~~~-~y~G~~~~-~~~~~-r~~k-~~~~-~~~-----~~--~~y  168 (245)
                      ....+..+.+|++.+|+|+++..+.|..++.......+. ...|.... ..... .-.. +... ..+     ..  ...
T Consensus        77 n~~~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (234)
T cd06421          77 NNALAHTTGDFVAILDADHVPTPDFLRRTLGYFLDDPKVALVQTPQFFYNPDPFDWLADGAPNEQELFYGVIQPGRDRWG  156 (234)
T ss_pred             HHHHHhCCCCEEEEEccccCcCccHHHHHHHHHhcCCCeEEEecceEEecCCcchhHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            344445589999999999999998888888776542022 22232111 10000 0000 0000 000     00  011


Q ss_pred             CCccCCCeeeecHHHHHHHHHhcccCCCCCCChhHHHHHHHhCCCeEeec
Q psy10879        169 LPYALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRYHD  218 (245)
Q Consensus       169 p~y~~G~gyvlS~~~~~~l~~~~~~~~~~~~eDv~iG~~l~~~~v~~~~~  218 (245)
                      ..++.|++.++++++++++-.-.   .....||..++.-+...|.+....
T Consensus       157 ~~~~~g~~~~~r~~~~~~ig~~~---~~~~~eD~~l~~r~~~~g~~i~~~  203 (234)
T cd06421         157 AAFCCGSGAVVRREALDEIGGFP---TDSVTEDLATSLRLHAKGWRSVYV  203 (234)
T ss_pred             CceecCceeeEeHHHHHHhCCCC---ccceeccHHHHHHHHHcCceEEEe
Confidence            34577999999999998874322   234579999998888888766543

Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.

>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis

Probab=96.10  E-value=0.47  Score=37.85  Aligned_cols=120  Identities=15%  Similarity=0.076  Sum_probs=67.2

Q ss_pred             HHHHHHHhccceeEEEEecCceeeehHHHHHHHhhc-CcCCcccEEEEecCCC-eeecCCCCcccCcccCCCCCCc-cCC
Q psy10879         98 HSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENK-FHYEKKLYWGFFDGRA-RVRRAGKWKEKNWFLCDRYLPY-ALG  174 (245)
Q Consensus        98 ~~l~w~~~~~~~~~~~k~DDD~~v~~~~L~~~L~~~-~~~~~~~y~G~~~~~~-~~~r~~k~~~~~~~~~~~yp~y-~~G  174 (245)
                      .++....+..+.+|++..|+|..+..+.|...+... ..+...+.+|...... .......+..+.+ ....+... +.|
T Consensus        73 ~a~n~g~~~a~~d~i~~ld~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  151 (202)
T cd04184          73 AATNSALELATGEFVALLDHDDELAPHALYEVVKALNEHPDADLIYSDEDKIDEGGKRSEPFFKPDW-SPDLLLSQNYIG  151 (202)
T ss_pred             HHHHHHHHhhcCCEEEEECCCCcCChHHHHHHHHHHHhCCCCCEEEccHHhccCCCCEeccccCCCC-CHHHhhhcCCcc
Confidence            344455555578999999999999998888888775 2221334444322100 0000000111111 00111111 335


Q ss_pred             CeeeecHHHHHHHHHhcccCCCCCCChhHHHHHHHhCCCeEeecCC
Q psy10879        175 GGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRYHDVR  220 (245)
Q Consensus       175 ~gyvlS~~~~~~l~~~~~~~~~~~~eDv~iG~~l~~~~v~~~~~~~  220 (245)
                      ++-++++++++++-.-..  .....||..++.-+.+.|.+..+.+.
T Consensus       152 ~~~~~~r~~~~~iggf~~--~~~~~eD~~l~~rl~~~g~~~~~~~~  195 (202)
T cd04184         152 HLLVYRRSLVRQVGGFRE--GFEGAQDYDLVLRVSEHTDRIAHIPR  195 (202)
T ss_pred             ceEeEEHHHHHHhCCCCc--CcccchhHHHHHHHHhccceEEEccH
Confidence            666789988887643222  12357999998888888888777664

The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.

>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans

Probab=95.95  E-value=0.46  Score=41.03  Aligned_cols=120  Identities=12%  Similarity=0.006  Sum_probs=69.7

Q ss_pred             HHHHHHHhccceeEEEEecCceeeehHHHHHHHhhcCcCCcccEEEEecCC---Ce---e----ecC-CCCccc-Ccc--
Q psy10879         98 HSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGFFDGR---AR---V----RRA-GKWKEK-NWF--  163 (245)
Q Consensus        98 ~~l~w~~~~~~~~~~~k~DDD~~v~~~~L~~~L~~~~~~~~~~y~G~~~~~---~~---~----~r~-~k~~~~-~~~--  163 (245)
                      .+.....+....+|++..|+|+.+...-|..++.........+..|.+...   ..   .    .+. ..|... .+.  
T Consensus        73 ~a~N~g~~~A~gd~i~fLD~D~~~~~~wL~~ll~~l~~~~~~~v~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (299)
T cd02510          73 RARIAGARAATGDVLVFLDSHCEVNVGWLEPLLARIAENRKTVVCPIIDVIDADTFEYRGSSGDARGGFDWSLHFKWLPL  152 (299)
T ss_pred             HHHHHHHHHccCCEEEEEeCCcccCccHHHHHHHHHHhCCCeEEEeeeccccCCCeeEecCCCceeEEecccceeccccC
Confidence            344555555679999999999999888887777765433123333332110   00   0    000 011110 000  


Q ss_pred             ---------c-CCCCCCccCCCeeeecHHHHHHHHHhcccCCCCCCChhHHHHHHHhCCCeEee
Q psy10879        164 ---------L-CDRYLPYALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRYH  217 (245)
Q Consensus       164 ---------~-~~~yp~y~~G~gyvlS~~~~~~l~~~~~~~~~~~~eDv~iG~~l~~~~v~~~~  217 (245)
                               + ....-+++.|+++++++++.+.+-.-.........||+-+..=+...|-+.+.
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~vGgfDe~~~~~~~ED~Dl~~R~~~~G~~i~~  216 (299)
T cd02510         153 PEEERRRESPTAPIRSPTMAGGLFAIDREWFLELGGYDEGMDIWGGENLELSFKVWQCGGSIEI  216 (299)
T ss_pred             CHHHhhhcCCCCCccCccccceeeEEEHHHHHHhCCCCCcccccCchhHHHHHHHHHcCCeEEE
Confidence                     0 11122456799999999999988544444444457999988777777765543

UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.

>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=95.77  E-value=0.61  Score=37.37  Aligned_cols=155  Identities=14%  Similarity=0.105  Sum_probs=79.8

Q ss_pred             cEEEEEEeecCchHHHHHHHHHhhhCCCEEEcCCccccCCchhHHHHHHHHHHHhccceeEEEEecCceeeehHHHHHHH
Q psy10879         51 QVKYLFSIGNKENVVDVKLKEEIRRYDDILLLNQVPDEYSSLSQKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHEL  130 (245)
Q Consensus        51 ~~~~~Fv~g~~~~~~~~~l~~E~~~~~Dii~~~d~~d~y~~l~~K~~~~l~w~~~~~~~~~~~k~DDD~~v~~~~L~~~L  130 (245)
                      .++++++-..+++...+.+++-+.+++..+.+-. .+.-.+.    ...+......++.+|++..|+|..+.++.|..++
T Consensus        27 ~~eiiVvddgS~d~t~~~~~~~~~~~~~~~~~~~-~~~~~G~----~~~~n~g~~~~~g~~v~~ld~Dd~~~~~~l~~~~  101 (214)
T cd04196          27 NDELIISDDGSTDGTVEIIKEYIDKDPFIIILIR-NGKNLGV----ARNFESLLQAADGDYVFFCDQDDIWLPDKLERLL  101 (214)
T ss_pred             CeEEEEEeCCCCCCcHHHHHHHHhcCCceEEEEe-CCCCccH----HHHHHHHHHhCCCCEEEEECCCcccChhHHHHHH
Confidence            4566666554443333344444555543332211 1111121    2233333456689999999999999888888888


Q ss_pred             hh-cCcCCcccEEEEec---CCCeeecCCCCcccCc-----ccCCCCCCccCCCeeeecHHHHHHHHHhcccCCCCCCCh
Q psy10879        131 EN-KFHYEKKLYWGFFD---GRARVRRAGKWKEKNW-----FLCDRYLPYALGGGYVLSHLLVKFISENSHMLSSYISED  201 (245)
Q Consensus       131 ~~-~~~~~~~~y~G~~~---~~~~~~r~~k~~~~~~-----~~~~~yp~y~~G~gyvlS~~~~~~l~~~~~~~~~~~~eD  201 (245)
                      .. .......++.|...   ..........+.....     +.......++.|+++++.+++++++.......  ...||
T Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~--~~~~D  179 (214)
T cd04196         102 KAFLKDDKPLLVYSDLELVDENGNPIGESFFEYQKIKPGTSFNNLLFQNVVTGCTMAFNRELLELALPFPDAD--VIMHD  179 (214)
T ss_pred             HHHhcCCCceEEecCcEEECCCCCCcccccccccccCCccCHHHHHHhCccCCceeeEEHHHHHhhccccccc--cccch
Confidence            76 23221334444322   1111111111100000     00011123567889999999999876543322  46788


Q ss_pred             hHHHHHHHhCC
Q psy10879        202 VSVGVWLSALD  212 (245)
Q Consensus       202 v~iG~~l~~~~  212 (245)
                      .++...+...|
T Consensus       180 ~~~~~~~~~~~  190 (214)
T cd04196         180 WWLALLASAFG  190 (214)
T ss_pred             HHHHHHHHHcC
Confidence            88877666643

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily

Probab=95.77  E-value=0.43  Score=39.68  Aligned_cols=120  Identities=8%  Similarity=0.002  Sum_probs=71.1

Q ss_pred             HHHHHHHhccceeEEEEecCceeeehHHHHHHHhhcCcCCcc-cEEE-EecCCCeeec-CCCCcccC---c----cc---
Q psy10879         98 HSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHYEKK-LYWG-FFDGRARVRR-AGKWKEKN---W----FL---  164 (245)
Q Consensus        98 ~~l~w~~~~~~~~~~~k~DDD~~v~~~~L~~~L~~~~~~~~~-~y~G-~~~~~~~~~r-~~k~~~~~---~----~~---  164 (245)
                      .++....++.+.+|++.+|+|+.+..+.|.+.+......... .++| .+........ -.+....+   .    .+   
T Consensus        74 ~a~n~g~~~a~gd~i~~~DaD~~~~~~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (241)
T cd06427          74 KACNYALAFARGEYVVIYDAEDAPDPDQLKKAVAAFARLDDKLACVQAPLNYYNARENWLTRMFALEYAAWFDYLLPGLA  153 (241)
T ss_pred             HHHHHHHHhcCCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEeCceEeeCCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence            455666666788999999999999999999888776431022 2332 2211100000 00000000   0    00   


Q ss_pred             CCCCCCccCCCeeeecHHHHHHHHHhcccCCCCCCChhHHHHHHHhCCCeEeecCC
Q psy10879        165 CDRYLPYALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRYHDVR  220 (245)
Q Consensus       165 ~~~yp~y~~G~gyvlS~~~~~~l~~~~~~~~~~~~eDv~iG~~l~~~~v~~~~~~~  220 (245)
                      ....+..++|++.++++++++.+-....   ....||..++.-+...|.+....+.
T Consensus       154 ~~~~~~~~~g~~~~~rr~~~~~vgg~~~---~~~~eD~~l~~rl~~~G~r~~~~~~  206 (241)
T cd06427         154 RLGLPIPLGGTSNHFRTDVLRELGGWDP---FNVTEDADLGLRLARAGYRTGVLNS  206 (241)
T ss_pred             hcCCeeecCCchHHhhHHHHHHcCCCCc---ccchhhHHHHHHHHHCCceEEEecc
Confidence            0122234678889999999998754322   2357999999888888877766543

The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot

>PRK11204 N-glycosyltransferase; Provisional

Probab=95.69  E-value=0.61  Score=42.33  Aligned_cols=188  Identities=13%  Similarity=0.066  Sum_probs=102.0

Q ss_pred             CCCCeeEEEEEeCCCCCHHHHHHHHHHHcCCcCCCcEEEEEEeecCc-hHHHHHHHHHhhhCCCEEEcCCccccCCchhH
Q psy10879         16 LKHSYFIVILILTSSKNYIRRKNIRDTWIKNIEKYQVKYLFSIGNKE-NVVDVKLKEEIRRYDDILLLNQVPDEYSSLSQ   94 (245)
Q Consensus        16 c~~~~~lli~V~S~~~~~~~R~~IR~TW~~~~~~~~~~~~Fv~g~~~-~~~~~~l~~E~~~~~Dii~~~d~~d~y~~l~~   94 (245)
                      ..+.+.+-|+|++--+...-++.++.-=....  ...+++ ++..++ ++..+.+++..+++..+..+. ..   .|. .
T Consensus        50 ~~~~p~vsViIp~yne~~~i~~~l~sl~~q~y--p~~eii-VvdD~s~d~t~~~l~~~~~~~~~v~~i~-~~---~n~-G  121 (420)
T PRK11204         50 LKEYPGVSILVPCYNEGENVEETISHLLALRY--PNYEVI-AINDGSSDNTGEILDRLAAQIPRLRVIH-LA---ENQ-G  121 (420)
T ss_pred             cCCCCCEEEEEecCCCHHHHHHHHHHHHhCCC--CCeEEE-EEECCCCccHHHHHHHHHHhCCcEEEEE-cC---CCC-C
Confidence            34456777878776544333444433222221  234444 444443 444555555566666665432 11   221 2


Q ss_pred             HHHHHHHHHHhccceeEEEEecCceeeehHHHHHHHhhcCcC-CcccEEEEecCCCeeecCCCCccc---Cccc------
Q psy10879         95 KVLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHY-EKKLYWGFFDGRARVRRAGKWKEK---NWFL------  164 (245)
Q Consensus        95 K~~~~l~w~~~~~~~~~~~k~DDD~~v~~~~L~~~L~~~~~~-~~~~y~G~~~~~~~~~r~~k~~~~---~~~~------  164 (245)
                      | -.++....+.++.+|++..|+|+.+..+.|.+.++....+ +-....|..    .......+...   ..|.      
T Consensus       122 k-a~aln~g~~~a~~d~i~~lDaD~~~~~d~L~~l~~~~~~~~~v~~v~g~~----~~~~~~~~~~~~~~~~~~~~~~~~  196 (420)
T PRK11204        122 K-ANALNTGAAAARSEYLVCIDGDALLDPDAAAYMVEHFLHNPRVGAVTGNP----RIRNRSTLLGRIQVGEFSSIIGLI  196 (420)
T ss_pred             H-HHHHHHHHHHcCCCEEEEECCCCCCChhHHHHHHHHHHhCCCeEEEECCc----eeccchhHHHHHHHHHHHHhhhHH
Confidence            3 3445566666789999999999999999888888776322 022222321    11110000000   0000      


Q ss_pred             ---CCCC--CCccCCCeeeecHHHHHHHHHhcccCCCCCCChhHHHHHHHhCCCeEeecC
Q psy10879        165 ---CDRY--LPYALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRYHDV  219 (245)
Q Consensus       165 ---~~~y--p~y~~G~gyvlS~~~~~~l~~~~~~~~~~~~eDv~iG~~l~~~~v~~~~~~  219 (245)
                         ...+  ....+|++.++++++++++-...   +....||+.++.-+.+.|.+....+
T Consensus       197 ~~~~~~~~~~~~~~G~~~~~rr~~l~~vgg~~---~~~~~ED~~l~~rl~~~G~~i~~~p  253 (420)
T PRK11204        197 KRAQRVYGRVFTVSGVITAFRKSALHEVGYWS---TDMITEDIDISWKLQLRGWDIRYEP  253 (420)
T ss_pred             HHHHHHhCCceEecceeeeeeHHHHHHhCCCC---CCcccchHHHHHHHHHcCCeEEecc
Confidence               0011  11346888999999998763222   2234699999998888887766544

>cd06532 Glyco_transf_25 Glycosyltransferase family 25 [lipooligosaccharide (LOS) biosynthesis protein] is a family of glycosyltransferases involved in LOS biosynthesis

Probab=95.40  E-value=0.22  Score=37.71  Aligned_cols=112  Identities=15%  Similarity=0.162  Sum_probs=67.9

Q ss_pred             EEEeCCCCCHHHHHHHHHHHcCCcCCCcEEEEEEeecCchHH-HHHHHHHh-----hhCCCEEEcCCccccCCchhHHHH
Q psy10879         24 ILILTSSKNYIRRKNIRDTWIKNIEKYQVKYLFSIGNKENVV-DVKLKEEI-----RRYDDILLLNQVPDEYSSLSQKVL   97 (245)
Q Consensus        24 i~V~S~~~~~~~R~~IR~TW~~~~~~~~~~~~Fv~g~~~~~~-~~~l~~E~-----~~~~Dii~~~d~~d~y~~l~~K~~   97 (245)
                      +.|.+-+...+||+.+++......    +.+-|+-|-...+. ...+....     ..++--     +..+.-.-.+..+
T Consensus         2 i~vInL~~~~~Rr~~~~~~~~~~~----~~~~~~~Avd~~~~~~~~~~~~~~~~~~~~~~~~-----l~~gEiGC~lSH~   72 (128)
T cd06532           2 IFVINLDRSTDRRERMEAQLAALG----LDFEFFDAVDGKDLSEEELAALYDALFLPRYGRP-----LTPGEIGCFLSHY   72 (128)
T ss_pred             EEEEECCCCHHHHHHHHHHHHHcC----CCeEEEeccccccCCHHHHHHHhHHHhhhhcCCC-----CChhhHHHHHHHH
Confidence            456777888899999888655543    34556655443111 11111111     112222     2222233345556


Q ss_pred             HHHHHHHhccceeEEEEecCceeeehHHHHHHHhhcCcCCcccEEEEecCCCeeecCCCCcccCcccCCCCCCccCCCee
Q psy10879         98 HSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGFFDGRARVRRAGKWKEKNWFLCDRYLPYALGGGY  177 (245)
Q Consensus        98 ~~l~w~~~~~~~~~~~k~DDD~~v~~~~L~~~L~~~~~~~~~~y~G~~~~~~~~~r~~k~~~~~~~~~~~yp~y~~G~gy  177 (245)
                      ..|+-+.+. +.++.+..+||+.+..+                                                +..||
T Consensus        73 ~~w~~~~~~-~~~~alIlEDDv~~~~~------------------------------------------------~~~~Y  103 (128)
T cd06532          73 KLWQKIVES-NLEYALILEDDAILDPD------------------------------------------------GTAGY  103 (128)
T ss_pred             HHHHHHHHc-CCCeEEEEccCcEECCC------------------------------------------------CceEE
Confidence            666655432 56789999999999887                                                34689


Q ss_pred             eecHHHHHHHHHhccc
Q psy10879        178 VLSHLLVKFISENSHM  193 (245)
Q Consensus       178 vlS~~~~~~l~~~~~~  193 (245)
                      ++|+.++++|+.....
T Consensus       104 ~vs~~~A~~ll~~~~~  119 (128)
T cd06532         104 LVSRKGAKKLLAALEP  119 (128)
T ss_pred             EeCHHHHHHHHHhCCC
Confidence            9999999999998754

The members include the beta(1,4) galactosyltransferases: Lgt2 of Moraxella catarrhalis, LgtB and LgtE of Neisseria gonorrhoeae and Lic2A of Haemophilus influenzae. M. catarrhalis Lgt2 catalyzes the addition of galactose (Gal) to the growing chain of LOS on the cell surface. N. gonorrhoeae LgtB and LgtE link Gal-beta(1,4) to GlcNAc (N-acetylglucosamine) and Glc (glucose), respectively. The genes encoding LgtB and LgtE are two genes of a five gene locus involved in the synthesis of gonococcal LOS. LgtE is believed to perform the first step in LOS biosynthesis.

>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase

Probab=95.30  E-value=1.1  Score=35.10  Aligned_cols=100  Identities=12%  Similarity=-0.080  Sum_probs=62.6

Q ss_pred             HHHHHHhccceeEEEEecCceeeehHHHHHHHhhcCcCCcccEEEEecCCCeeecCCCCcccCcccCCCCCCccCCCeee
Q psy10879         99 SFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGFFDGRARVRRAGKWKEKNWFLCDRYLPYALGGGYV  178 (245)
Q Consensus        99 ~l~w~~~~~~~~~~~k~DDD~~v~~~~L~~~L~~~~~~~~~~y~G~~~~~~~~~r~~k~~~~~~~~~~~yp~y~~G~gyv  178 (245)
                      .+....+.++.+|++..|+|..+..+-|...++...+  .....|..........               .....|+++.
T Consensus        70 ~~n~g~~~a~g~~i~~lD~D~~~~~~~l~~~~~~~~~--~~~v~g~~~~~~~~~~---------------~~~~~~~~~~  132 (182)
T cd06420          70 IRNKAIAAAKGDYLIFIDGDCIPHPDFIADHIELAEP--GVFLSGSRVLLNEKLT---------------ERGIRGCNMS  132 (182)
T ss_pred             HHHHHHHHhcCCEEEEEcCCcccCHHHHHHHHHHhCC--CcEEecceeecccccc---------------eeEeccceEE
Confidence            3444445568899999999999988888887777643  3333343221110000               0234677788


Q ss_pred             ecHHHHHHHHHhcccCCCCCCChhHHHHHHHhCCCeE
Q psy10879        179 LSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITR  215 (245)
Q Consensus       179 lS~~~~~~l~~~~~~~~~~~~eDv~iG~~l~~~~v~~  215 (245)
                      +.+..+..+-...........||..++.=+.+.|+..
T Consensus       133 ~~r~~~~~~ggf~~~~~~~~~eD~~l~~r~~~~g~~~  169 (182)
T cd06420         133 FWKKDLLAVNGFDEEFTGWGGEDSELVARLLNSGIKF  169 (182)
T ss_pred             EEHHHHHHhCCCCcccccCCcchHHHHHHHHHcCCcE
Confidence            8888877544333333334589999998888888443

Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm

>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase

Probab=95.18  E-value=1.4  Score=36.74  Aligned_cols=160  Identities=9%  Similarity=-0.050  Sum_probs=84.5

Q ss_pred             cEEEEEEeecCchHHHHHHHHHhhhCCC--EEEcCCccccCCchhHHHHHHHHHHHhccceeEEEEecCceeeehHHHHH
Q psy10879         51 QVKYLFSIGNKENVVDVKLKEEIRRYDD--ILLLNQVPDEYSSLSQKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIH  128 (245)
Q Consensus        51 ~~~~~Fv~g~~~~~~~~~l~~E~~~~~D--ii~~~d~~d~y~~l~~K~~~~l~w~~~~~~~~~~~k~DDD~~v~~~~L~~  128 (245)
                      .++++++-+.+.+...+.+.+-.++|++  +..+.  ..  .|.- + -.++.......+.+|++.+|.|..+.++.|..
T Consensus        40 ~~eiivvDdgS~D~t~~i~~~~~~~~~~~~v~~~~--~~--~n~G-~-~~a~n~g~~~a~g~~i~~lD~D~~~~~~~l~~  113 (243)
T PLN02726         40 DFEIIVVDDGSPDGTQDVVKQLQKVYGEDRILLRP--RP--GKLG-L-GTAYIHGLKHASGDFVVIMDADLSHHPKYLPS  113 (243)
T ss_pred             CeEEEEEeCCCCCCHHHHHHHHHHhcCCCcEEEEe--cC--CCCC-H-HHHHHHHHHHcCCCEEEEEcCCCCCCHHHHHH
Confidence            4566666555543333334443445543  33221  11  1111 1 23444444555789999999999999988888


Q ss_pred             HHhhcCcCCcccEEEEecCCCeeecCCCCc---cc-------CcccCCCCCCccCCCeeeecHHHHHHHHHhcccCCCCC
Q psy10879        129 ELENKFHYEKKLYWGFFDGRARVRRAGKWK---EK-------NWFLCDRYLPYALGGGYVLSHLLVKFISENSHMLSSYI  198 (245)
Q Consensus       129 ~L~~~~~~~~~~y~G~~~~~~~~~r~~k~~---~~-------~~~~~~~yp~y~~G~gyvlS~~~~~~l~~~~~~~~~~~  198 (245)
                      ++.........+..|.......-.....|.   .+       ........ +.+.|++.++++++++.+.......  ..
T Consensus       114 l~~~~~~~~~~~v~g~r~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~-~d~~g~~~~~rr~~~~~i~~~~~~~--~~  190 (243)
T PLN02726        114 FIKKQRETGADIVTGTRYVKGGGVHGWDLRRKLTSRGANVLAQTLLWPGV-SDLTGSFRLYKRSALEDLVSSVVSK--GY  190 (243)
T ss_pred             HHHHHHhcCCcEEEEccccCCCCcCCccHHHHHHHHHHHHHHHHHhCCCC-CcCCCcccceeHHHHHHHHhhccCC--Cc
Confidence            887653321567777643211000000010   00       00001111 2356788899999999997543322  23


Q ss_pred             CChhHHHHHHHhCCCeEeecC
Q psy10879        199 SEDVSVGVWLSALDITRYHDV  219 (245)
Q Consensus       199 ~eDv~iG~~l~~~~v~~~~~~  219 (245)
                      ..|.-+..-+...|.+.++.|
T Consensus       191 ~~~~el~~~~~~~g~~i~~vp  211 (243)
T PLN02726        191 VFQMEIIVRASRKGYRIEEVP  211 (243)
T ss_pred             EEehHHHHHHHHcCCcEEEeC
Confidence            346667666667777666554

>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=95.07  E-value=1.4  Score=35.22  Aligned_cols=96  Identities=13%  Similarity=0.076  Sum_probs=60.9

Q ss_pred             HHHHHHHHHhccceeEEEEecCceeeehHHHHHHHhhcCcCCcccEEEEecCCCeeecCCCCcccCcccCCCCCCccCCC
Q psy10879         96 VLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGFFDGRARVRRAGKWKEKNWFLCDRYLPYALGG  175 (245)
Q Consensus        96 ~~~~l~w~~~~~~~~~~~k~DDD~~v~~~~L~~~L~~~~~~~~~~y~G~~~~~~~~~r~~k~~~~~~~~~~~yp~y~~G~  175 (245)
                      .-.+++++. ..+.+|++..|+|..+..+.|..++.....+.-.++.|.....     ++                 .++
T Consensus        68 ~n~~~~~a~-~~~~d~v~~ld~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~-----~~-----------------~~~  124 (202)
T cd04185          68 FYEGVRRAY-ELGYDWIWLMDDDAIPDPDALEKLLAYADKDNPQFLAPLVLDP-----DG-----------------SFV  124 (202)
T ss_pred             HHHHHHHHh-ccCCCEEEEeCCCCCcChHHHHHHHHHHhcCCceEecceeEcC-----CC-----------------ceE
Confidence            344556654 3488999999999999988777777665422133333332211     00                 345


Q ss_pred             eeeecHHHHHHHHHhcccCCCCCCChhHHHHHHHhCCCeE
Q psy10879        176 GYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITR  215 (245)
Q Consensus       176 gyvlS~~~~~~l~~~~~~~~~~~~eDv~iG~~l~~~~v~~  215 (245)
                      |.++++++++.+--.... -....||+.++.-+...|...
T Consensus       125 ~~~~~~~~~~~~g~~~~~-~~~~~eD~~~~~r~~~~G~~i  163 (202)
T cd04185         125 GVLISRRVVEKIGLPDKE-FFIWGDDTEYTLRASKAGPGI  163 (202)
T ss_pred             EEEEeHHHHHHhCCCChh-hhccchHHHHHHHHHHcCCcE
Confidence            688999999877322111 123569999998888888665

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111

Probab=94.90  E-value=0.46  Score=43.71  Aligned_cols=190  Identities=9%  Similarity=0.010  Sum_probs=95.3

Q ss_pred             CCCCeeEEEEEeCCCCCHHHHHHHHHHHcCCcCCCcEEEEEEeecCchHHHHHHHHHhhhCCCEEEcCCccccCCchhHH
Q psy10879         16 LKHSYFIVILILTSSKNYIRRKNIRDTWIKNIEKYQVKYLFSIGNKENVVDVKLKEEIRRYDDILLLNQVPDEYSSLSQK   95 (245)
Q Consensus        16 c~~~~~lli~V~S~~~~~~~R~~IR~TW~~~~~~~~~~~~Fv~g~~~~~~~~~l~~E~~~~~Dii~~~d~~d~y~~l~~K   95 (245)
                      ....+.+-|+|++--+...-++.|+.--.+.-+...++++.+-+.+.++..+.+++-.+++..+....  .+.-.   .|
T Consensus        45 ~~~~P~vsVIIP~yNe~~~l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T~~il~~~~~~~~~v~v~~--~~~~~---Gk  119 (439)
T TIGR03111        45 IGKLPDITIIIPVYNSEDTLFNCIESIYNQTYPIELIDIILANNQSTDDSFQVFCRAQNEFPGLSLRY--MNSDQ---GK  119 (439)
T ss_pred             cCCCCCEEEEEEeCCChHHHHHHHHHHHhcCCCCCCeEEEEEECCCChhHHHHHHHHHHhCCCeEEEE--eCCCC---CH
Confidence            34445666666665444444555555433332222344444433333333333343345555543211  11111   23


Q ss_pred             HHHHHHHHHhccceeEEEEecCceeeehHHHHHHHhhcCcC-CcccEEEEecCCCee-ecCCCC---cccC--c--cc--
Q psy10879         96 VLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHY-EKKLYWGFFDGRARV-RRAGKW---KEKN--W--FL--  164 (245)
Q Consensus        96 ~~~~l~w~~~~~~~~~~~k~DDD~~v~~~~L~~~L~~~~~~-~~~~y~G~~~~~~~~-~r~~k~---~~~~--~--~~--  164 (245)
                       -.++.+..++++.+|++.+|.|..+..+.|.+.+.....+ .-....|.+...... .....+   ...+  .  |.  
T Consensus       120 -a~AlN~gl~~s~g~~v~~~DaD~~~~~d~L~~l~~~f~~~~~v~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~  198 (439)
T TIGR03111       120 -AKALNAAIYNSIGKYIIHIDSDGKLHKDAIKNMVTRFENNPDIHAMTGVILTDKELIEKTKGRFLKLIRRCEYFEYAQA  198 (439)
T ss_pred             -HHHHHHHHHHccCCEEEEECCCCCcChHHHHHHHHHHHhCCCeEEEEeEEecCchhhhhhcchhhhHhHHhHHHHHHHH
Confidence             3455566666788999999999999999998888776432 023334554321110 000000   0000  0  00  


Q ss_pred             --------C-CCCCCccCCCeeeecHHHHHHHHHhcccCCCCCCChhHHHHHHH-hCCCe
Q psy10879        165 --------C-DRYLPYALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLS-ALDIT  214 (245)
Q Consensus       165 --------~-~~yp~y~~G~gyvlS~~~~~~l~~~~~~~~~~~~eDv~iG~~l~-~~~v~  214 (245)
                              . ..-+..++|++.++.+++++++--..   +....||..++.=+. ..|-+
T Consensus       199 ~l~~r~~~s~~~~~~~~sGa~~~~Rr~~l~~vggf~---~~~i~ED~~l~~rl~~~~g~k  255 (439)
T TIGR03111       199 FLAGRNFESQVNSLFTLSGAFSAFRRETILKTQLYN---SETVGEDTDMTFQIRELLDGK  255 (439)
T ss_pred             HHhhhHHHHhcCCeEEEccHHHhhhHHHHHHhCCCC---CCCcCccHHHHHHHHHhcCCe
Confidence                    0 01112367888889999887753222   222479999986554 33443

Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).

>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=94.88  E-value=1.2  Score=33.60  Aligned_cols=155  Identities=14%  Similarity=0.106  Sum_probs=77.5

Q ss_pred             EEEEEeCCCCCHHHHH-HHHHHHcCCcCCCcEEEEEEeecCchHHHHHHHHHhhhCCCEEEcCCccccCCchhHHHHHHH
Q psy10879         22 IVILILTSSKNYIRRK-NIRDTWIKNIEKYQVKYLFSIGNKENVVDVKLKEEIRRYDDILLLNQVPDEYSSLSQKVLHSF  100 (245)
Q Consensus        22 lli~V~S~~~~~~~R~-~IR~TW~~~~~~~~~~~~Fv~g~~~~~~~~~l~~E~~~~~Dii~~~d~~d~y~~l~~K~~~~l  100 (245)
                      |+|.+.-.++...+-- .+++.  .   ....+++++-..+.++....+++-.+....+..+. ..   .|.  -.-.++
T Consensus         2 vvip~~n~~~~l~~~l~sl~~q--~---~~~~eiivvdd~s~d~~~~~~~~~~~~~~~i~~i~-~~---~n~--g~~~~~   70 (169)
T PF00535_consen    2 VVIPTYNEAEYLERTLESLLKQ--T---DPDFEIIVVDDGSTDETEEILEEYAESDPNIRYIR-NP---ENL--GFSAAR   70 (169)
T ss_dssp             EEEEESS-TTTHHHHHHHHHHH--S---GCEEEEEEEECS-SSSHHHHHHHHHCCSTTEEEEE-HC---CCS--HHHHHH
T ss_pred             EEEEeeCCHHHHHHHHHHHhhc--c---CCCEEEEEecccccccccccccccccccccccccc-cc---ccc--cccccc
Confidence            3444444545555443 56666  1   22345655555443444444444443244444331 12   232  234445


Q ss_pred             HHHHhccceeEEEEecCceeeehHHHHHHHhhcCcCCcccEEEEecC---CCe-eecCCC---Cccc-C---cccCCCCC
Q psy10879        101 KYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGFFDG---RAR-VRRAGK---WKEK-N---WFLCDRYL  169 (245)
Q Consensus       101 ~w~~~~~~~~~~~k~DDD~~v~~~~L~~~L~~~~~~~~~~y~G~~~~---~~~-~~r~~k---~~~~-~---~~~~~~yp  169 (245)
                      ....++.+.+|++.+|||.++..+.|..+++..........+|....   ... ..+...   +... .   ......--
T Consensus        71 n~~~~~a~~~~i~~ld~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (169)
T PF00535_consen   71 NRGIKHAKGEYILFLDDDDIISPDWLEELVEALEKNPPDVVIGSVIYIDDDNRYPDRRLRFSFWNRFERKIFNNIRFWKI  150 (169)
T ss_dssp             HHHHHH--SSEEEEEETTEEE-TTHHHHHHHHHHHCTTEEEEEEEEEEECTTETEECCCTSEEEECCHCHHHHTTHSTTS
T ss_pred             cccccccceeEEEEeCCCceEcHHHHHHHHHHHHhCCCcEEEEEEEEecCCccccccccchhhhhhhhhHHHHhhhcCCc
Confidence            55556666779999999999999877777766554214566665432   111 111110   1110 0   01111222


Q ss_pred             CccCCCeeeecHHHHHHH
Q psy10879        170 PYALGGGYVLSHLLVKFI  187 (245)
Q Consensus       170 ~y~~G~gyvlS~~~~~~l  187 (245)
                      +++.|++.++++++++++
T Consensus       151 ~~~~~~~~~~rr~~~~~~  168 (169)
T PF00535_consen  151 SFFIGSCALFRRSVFEEI  168 (169)
T ss_dssp             SEESSSCEEEEEHHHHHC
T ss_pred             ccccccEEEEEHHHHHhh
Confidence            467889999999998875

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....

>PRK14583 hmsR N-glycosyltransferase; Provisional

Probab=94.83  E-value=0.87  Score=41.92  Aligned_cols=188  Identities=11%  Similarity=0.070  Sum_probs=102.1

Q ss_pred             CCeeEEEEEeCCCCCHHHHHHHHHHHcCCcCCCcEEEEEEeecCchHHHHHHHHHhhhCCCEEEcCCccccCCchhHHHH
Q psy10879         18 HSYFIVILILTSSKNYIRRKNIRDTWIKNIEKYQVKYLFSIGNKENVVDVKLKEEIRRYDDILLLNQVPDEYSSLSQKVL   97 (245)
Q Consensus        18 ~~~~lli~V~S~~~~~~~R~~IR~TW~~~~~~~~~~~~Fv~g~~~~~~~~~l~~E~~~~~Dii~~~d~~d~y~~l~~K~~   97 (245)
                      ..+.+-|+|++.-+...-++.|+.- .++. ..+.+++++...+.++..+.+.+..+++..+..+. ..   .|. .| -
T Consensus        73 ~~p~vsViIP~yNE~~~i~~~l~sl-l~q~-yp~~eIivVdDgs~D~t~~~~~~~~~~~~~v~vv~-~~---~n~-Gk-a  144 (444)
T PRK14583         73 GHPLVSILVPCFNEGLNARETIHAA-LAQT-YTNIEVIAINDGSSDDTAQVLDALLAEDPRLRVIH-LA---HNQ-GK-A  144 (444)
T ss_pred             CCCcEEEEEEeCCCHHHHHHHHHHH-HcCC-CCCeEEEEEECCCCccHHHHHHHHHHhCCCEEEEE-eC---CCC-CH-H
Confidence            3456777777775554444444432 2222 22456555544444444444555556666554332 11   121 13 2


Q ss_pred             HHHHHHHhccceeEEEEecCceeeehHHHHHHHhhcCcC-CcccEEEEecCCCeeecC---CCCcccCccc--------C
Q psy10879         98 HSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHY-EKKLYWGFFDGRARVRRA---GKWKEKNWFL--------C  165 (245)
Q Consensus        98 ~~l~w~~~~~~~~~~~k~DDD~~v~~~~L~~~L~~~~~~-~~~~y~G~~~~~~~~~r~---~k~~~~~~~~--------~  165 (245)
                      .+++.....++.+|++..|.|+.+..+.|...+.....+ +.....|.....   .++   ++....++..        .
T Consensus       145 ~AlN~gl~~a~~d~iv~lDAD~~~~~d~L~~lv~~~~~~~~~g~v~g~~~~~---~~~~~~~~~~~~e~~~~~~~~~~~~  221 (444)
T PRK14583        145 IALRMGAAAARSEYLVCIDGDALLDKNAVPYLVAPLIANPRTGAVTGNPRIR---TRSTLIGRVQVGEFSSIIGLIKRTQ  221 (444)
T ss_pred             HHHHHHHHhCCCCEEEEECCCCCcCHHHHHHHHHHHHhCCCeEEEEccceec---CCCcchhhHHHHHHHHHHHHHHHHH
Confidence            455555566689999999999999999888888765322 022222321110   011   1100000000        0


Q ss_pred             CCC-CC-ccCCCeeeecHHHHHHHHHhcccCCCCCCChhHHHHHHHhCCCeEeecC
Q psy10879        166 DRY-LP-YALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRYHDV  219 (245)
Q Consensus       166 ~~y-p~-y~~G~gyvlS~~~~~~l~~~~~~~~~~~~eDv~iG~~l~~~~v~~~~~~  219 (245)
                      ..+ +. .++|++..+.+++++++--..   +....||..+|.-+...|.+....+
T Consensus       222 ~~~g~~~~~sG~~~~~rr~al~~vGg~~---~~~i~ED~dl~~rl~~~G~~i~~~p  274 (444)
T PRK14583        222 RVYGQVFTVSGVVAAFRRRALADVGYWS---PDMITEDIDISWKLQLKHWSVFFEP  274 (444)
T ss_pred             HHhCCceEecCceeEEEHHHHHHcCCCC---CCcccccHHHHHHHHHcCCeEEEee
Confidence            111 12 356888999999998874322   2234699999999998887765544

>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan

Probab=94.38  E-value=1.4  Score=36.07  Aligned_cols=157  Identities=10%  Similarity=-0.026  Sum_probs=82.5

Q ss_pred             EEEEEEeecCchHHHHHHHHHhhhCCCEEEcCCccccCCchhHHHHHHHHHHHhccceeEEEEecCceeeehHHHHHHHh
Q psy10879         52 VKYLFSIGNKENVVDVKLKEEIRRYDDILLLNQVPDEYSSLSQKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELE  131 (245)
Q Consensus        52 ~~~~Fv~g~~~~~~~~~l~~E~~~~~Dii~~~d~~d~y~~l~~K~~~~l~w~~~~~~~~~~~k~DDD~~v~~~~L~~~L~  131 (245)
                      .+++++...+.+...+.+ ++...+..+.++.  .+. .   .|.- ++....+..+.+|++.+|+|+.+..+.|...+.
T Consensus        29 ~eiivvdd~s~d~~~~~l-~~~~~~~~~~v~~--~~~-~---g~~~-a~n~g~~~a~~d~v~~lD~D~~~~~~~l~~l~~  100 (235)
T cd06434          29 LEIIVVTDGDDEPYLSIL-SQTVKYGGIFVIT--VPH-P---GKRR-ALAEGIRHVTTDIVVLLDSDTVWPPNALPEMLK  100 (235)
T ss_pred             CEEEEEeCCCChHHHHHH-HhhccCCcEEEEe--cCC-C---ChHH-HHHHHHHHhCCCEEEEECCCceeChhHHHHHHH
Confidence            466666555543333333 3455666666432  111 2   2322 233333444899999999999999999988888


Q ss_pred             hcCcCCcccEEEEecCCCeeecCCCCcc------c---C-ccc-CCCC-C-CccCCCeeeecHHHHHHHHHhcc------
Q psy10879        132 NKFHYEKKLYWGFFDGRARVRRAGKWKE------K---N-WFL-CDRY-L-PYALGGGYVLSHLLVKFISENSH------  192 (245)
Q Consensus       132 ~~~~~~~~~y~G~~~~~~~~~r~~k~~~------~---~-~~~-~~~y-p-~y~~G~gyvlS~~~~~~l~~~~~------  192 (245)
                      ....+.-....|....... . .+.|..      .   . .+. ...+ . +.+.|++.++.+++++.+.-...      
T Consensus       101 ~~~~~~v~~v~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~~~~~~~~~~~~~~  178 (235)
T cd06434         101 PFEDPKVGGVGTNQRILRP-R-DSKWSFLAAEYLERRNEEIRAAMSYDGGVPCLSGRTAAYRTEILKDFLFLEEFTNETF  178 (235)
T ss_pred             hccCCCEeEEcCceEeecC-c-ccHHHHHHHHHHHHHHHHHHHHHhhCCCEEEccCcHHHHHHHHHhhhhhHHHhhhhhh
Confidence            8753212222232211100 0 011100      0   0 000 0011 1 23567888888888876543221      


Q ss_pred             -cCCCCCCChhHHHHHHHhCCCeEeec
Q psy10879        193 -MLSSYISEDVSVGVWLSALDITRYHD  218 (245)
Q Consensus       193 -~~~~~~~eDv~iG~~l~~~~v~~~~~  218 (245)
                       ..+....||..++.-+.+.|....-.
T Consensus       179 ~~~~~~~~eD~~l~~~~~~~g~~~~~~  205 (235)
T cd06434         179 MGRRLNAGDDRFLTRYVLSHGYKTVYQ  205 (235)
T ss_pred             cCCCCCcCchHHHHHHHHHCCCeEEEe
Confidence             12345679999988888888765543

Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.

>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis

Probab=93.89  E-value=2.5  Score=33.15  Aligned_cols=120  Identities=8%  Similarity=-0.129  Sum_probs=69.9

Q ss_pred             HHHHHHHHhccceeEEEEecCceeeehHHHHHHHhhc--CcCCcccEEEEecCCC-eeecCCCCcccCccc-CCCCCCcc
Q psy10879         97 LHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENK--FHYEKKLYWGFFDGRA-RVRRAGKWKEKNWFL-CDRYLPYA  172 (245)
Q Consensus        97 ~~~l~w~~~~~~~~~~~k~DDD~~v~~~~L~~~L~~~--~~~~~~~y~G~~~~~~-~~~r~~k~~~~~~~~-~~~yp~y~  172 (245)
                      -.++..+.+.++.+|++..|+|..+..+.+...+...  .+. ..+..|...... .......+....... .-....+.
T Consensus        64 ~~a~n~~~~~a~~~~v~~ld~D~~~~~~~~~~~~~~~~~~~~-~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (202)
T cd06433          64 YDAMNKGIALATGDIIGFLNSDDTLLPGALLAVVAAFAEHPE-VDVVYGDVLLVDENGRVIGRRRPPPFLDKFLLYGMPI  142 (202)
T ss_pred             HHHHHHHHHHcCCCEEEEeCCCcccCchHHHHHHHHHHhCCC-ccEEEeeeEEEcCCCCcccCCCCcchhhhHHhhcCcc
Confidence            3445566667788999999999999999999887443  222 456666543210 000011110000011 11122356


Q ss_pred             CCCeeeecHHHHHHHHHhcccCCCCCCChhHHHHHHHhCCCeEeecC
Q psy10879        173 LGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRYHDV  219 (245)
Q Consensus       173 ~G~gyvlS~~~~~~l~~~~~~~~~~~~eDv~iG~~l~~~~v~~~~~~  219 (245)
                      .|++.++++++++.+-.....  ....+|..+..-+...|......+
T Consensus       143 ~~~~~~~~~~~~~~~~~f~~~--~~~~~D~~~~~r~~~~g~~~~~~~  187 (202)
T cd06433         143 CHQATFFRRSLFEKYGGFDES--YRIAADYDLLLRLLLAGKIFKYLP  187 (202)
T ss_pred             cCcceEEEHHHHHHhCCCchh--hCchhhHHHHHHHHHcCCceEecc
Confidence            778889999999887532211  224578888777777776665444

Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]

Probab=93.83  E-value=3  Score=37.75  Aligned_cols=191  Identities=9%  Similarity=0.006  Sum_probs=116.2

Q ss_pred             eeEEEEEeCCCCCH-HHHHHHHHHHcCCcCCCcEEEEEEeecCchHHHHHHHHHhhhCC-CEEEcCCccccCCchhHHHH
Q psy10879         20 YFIVILILTSSKNY-IRRKNIRDTWIKNIEKYQVKYLFSIGNKENVVDVKLKEEIRRYD-DILLLNQVPDEYSSLSQKVL   97 (245)
Q Consensus        20 ~~lli~V~S~~~~~-~~R~~IR~TW~~~~~~~~~~~~Fv~g~~~~~~~~~l~~E~~~~~-Dii~~~d~~d~y~~l~~K~~   97 (245)
                      +.+-++|++--+.. -..+.++..=...-  .+.+++.+.+.+.++..+.+.+-.++++ ++...  ..   ......-.
T Consensus        54 p~vsviiP~ynE~~~~~~~~l~s~~~~dy--p~~evivv~d~~~d~~~~~~~~~~~~~~~~~~~~--~~---~~~~~gK~  126 (439)
T COG1215          54 PKVSVIIPAYNEEPEVLEETLESLLSQDY--PRYEVIVVDDGSTDETYEILEELGAEYGPNFRVI--YP---EKKNGGKA  126 (439)
T ss_pred             CceEEEEecCCCchhhHHHHHHHHHhCCC--CCceEEEECCCCChhHHHHHHHHHhhcCcceEEE--ec---cccCccch
Confidence            77778888876666 33334444444432  2256666666555555555666666775 44422  11   11112335


Q ss_pred             HHHHHHHhccceeEEEEecCceeeehHHHHHHHhhcCcCCccc-EEEEecCCCeee-cC--CCC----cccC-----ccc
Q psy10879         98 HSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHYEKKL-YWGFFDGRARVR-RA--GKW----KEKN-----WFL  164 (245)
Q Consensus        98 ~~l~w~~~~~~~~~~~k~DDD~~v~~~~L~~~L~~~~~~~~~~-y~G~~~~~~~~~-r~--~k~----~~~~-----~~~  164 (245)
                      .++.+.....+.++++..|-|+.+..+.|.+.+.....+ ... +.|.......+. .+  ++.    +...     ...
T Consensus       127 ~al~~~l~~~~~d~V~~~DaD~~~~~d~l~~~~~~f~~~-~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  205 (439)
T COG1215         127 GALNNGLKRAKGDVVVILDADTVPEPDALRELVSPFEDP-PVGAVVGTPRIRNRPDPSNLLGRIQAIEYLSAFYFRLRAA  205 (439)
T ss_pred             HHHHHHHhhcCCCEEEEEcCCCCCChhHHHHHHhhhcCC-CeeEEeCCceeeecCChhhhcchhcchhhhhhHHHhhhhh
Confidence            666777767789999999999999999999999887654 233 444332111110 00  000    0000     001


Q ss_pred             -CCCCCCccCCCeeeecHHHHHHHHHhcccCCCCCCChhHHHHHHHhCCCeEeecCCc
Q psy10879        165 -CDRYLPYALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRYHDVRF  221 (245)
Q Consensus       165 -~~~yp~y~~G~gyvlS~~~~~~l~~~~~~~~~~~~eDv~iG~~l~~~~v~~~~~~~f  221 (245)
                       ......+|.|++.++.+++++.+-   ...+..--||..++..+...|.+....+.-
T Consensus       206 ~~~g~~~~~~G~~~~~rr~aL~~~g---~~~~~~i~ED~~lt~~l~~~G~~~~~~~~~  260 (439)
T COG1215         206 SKGGLISFLSGSSSAFRRSALEEVG---GWLEDTITEDADLTLRLHLRGYRVVYVPEA  260 (439)
T ss_pred             hhcCCeEEEcceeeeEEHHHHHHhC---CCCCCceeccHHHHHHHHHCCCeEEEeecc
Confidence             122466799999999999999887   223444579999999999888877765544

>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan

Probab=93.11  E-value=2.4  Score=36.06  Aligned_cols=189  Identities=9%  Similarity=0.058  Sum_probs=101.7

Q ss_pred             EEEeCCCCCHH-HHHHHHHHHcC---CcCCCcEEEEEEeecCc-hHHHHH-------HHHHhhhCCCEEEcCCccccCCc
Q psy10879         24 ILILTSSKNYI-RRKNIRDTWIK---NIEKYQVKYLFSIGNKE-NVVDVK-------LKEEIRRYDDILLLNQVPDEYSS   91 (245)
Q Consensus        24 i~V~S~~~~~~-~R~~IR~TW~~---~~~~~~~~~~Fv~g~~~-~~~~~~-------l~~E~~~~~Dii~~~d~~d~y~~   91 (245)
                      |+|++.-...+ -.+.++..+..   +....++++ |++..+. ++....       +.+|....-.+....  ...-.+
T Consensus         3 IliP~~ne~~~~l~~~l~~~~~~~~~~~~~~~~eI-~vldD~~d~~~~~~~~~~~~~l~~~~~~~~~v~~~~--r~~~~g   79 (254)
T cd04191           3 IVMPVYNEDPARVFAGLRAMYESLAKTGLADHFDF-FILSDTRDPDIWLAEEAAWLDLCEELGAQGRIYYRR--RRENTG   79 (254)
T ss_pred             EEEeCCCCCHHHHHHHHHHHHHHHHhcCCcCceEE-EEECCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEE--cCCCCC
Confidence            66777777766 56677776642   111123555 8887766 432211       222222223344221  222222


Q ss_pred             hhHHHHHHHHHHHhc-cceeEEEEecCceeeehHHHHHHHhhcCcCCcccEEEEecCCCeee-cCCCCcc----c-Ccc-
Q psy10879         92 LSQKVLHSFKYIYEH-FDFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGFFDGRARVR-RAGKWKE----K-NWF-  163 (245)
Q Consensus        92 l~~K~~~~l~w~~~~-~~~~~~~k~DDD~~v~~~~L~~~L~~~~~~~~~~y~G~~~~~~~~~-r~~k~~~----~-~~~-  163 (245)
                        +|.-..-..+... .+++|++..|.|+.+..+-|.+.+.....+ ..  +|-+....... +++.+..    . ..+ 
T Consensus        80 --~Kag~l~~~~~~~~~~~~~i~~~DaD~~~~p~~l~~~v~~~~~~-~~--vg~vq~~~~~~n~~~~~~~~~~~~~~~~~  154 (254)
T cd04191          80 --RKAGNIADFCRRWGSRYDYMVVLDADSLMSGDTIVRLVRRMEAN-PR--AGIIQTAPKLIGAETLFARLQQFANRLYG  154 (254)
T ss_pred             --ccHHHHHHHHHHhCCCCCEEEEEeCCCCCCHHHHHHHHHHHHhC-CC--EEEEeCCceeECCCCHHHHHHHHHHHHHH
Confidence              4555444444333 378999999999999999999999876422 11  22222111110 1111100    0 000 


Q ss_pred             c----C-C---CCCCccCCCeeeecHHHHHHHHHhc-----ccC-CCCCCChhHHHHHHHhCCCeEeecCC
Q psy10879        164 L----C-D---RYLPYALGGGYVLSHLLVKFISENS-----HML-SSYISEDVSVGVWLSALDITRYHDVR  220 (245)
Q Consensus       164 ~----~-~---~yp~y~~G~gyvlS~~~~~~l~~~~-----~~~-~~~~~eDv~iG~~l~~~~v~~~~~~~  220 (245)
                      +    . .   .--.+|.|...++.+++++.+....     ... ...-.||..+|..+...|-+.+-.+.
T Consensus       155 ~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~~~~~~~i~g~g~~~~~~l~eD~~l~~~~~~~G~ri~~~~~  225 (254)
T cd04191         155 PVFGRGLAAWQGGEGNYWGHNAIIRVAAFMEHCALPVLPGRPPFGGHILSHDFVEAALMRRAGWEVRLAPD  225 (254)
T ss_pred             HHHHHHHHHhcCCccCccceEEEEEHHHHHHhcCCccccCCCCCCCCeecHHHHHHHHHHHcCCEEEEccC
Confidence            0    0 0   0012566999999999988753221     111 22457999999999999988776654

Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.

>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2

Probab=93.08  E-value=0.4  Score=38.30  Aligned_cols=107  Identities=14%  Similarity=-0.003  Sum_probs=64.8

Q ss_pred             EEEEecCceeeehHHHHHHHhhcCcCCcccEEEEecCCCeeecCCCCcccC-------cc---cCCCCCCccCCCeeeec
Q psy10879        111 YLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGFFDGRARVRRAGKWKEKN-------WF---LCDRYLPYALGGGYVLS  180 (245)
Q Consensus       111 ~~~k~DDD~~v~~~~L~~~L~~~~~~~~~~y~G~~~~~~~~~r~~k~~~~~-------~~---~~~~yp~y~~G~gyvlS  180 (245)
                      |++.+|+|+.+..+-|.+.+.....++-...-|.+........-.++...+       ..   ..-..+.++.|++.+++
T Consensus         1 ~v~~~DaDt~~~~d~l~~~~~~~~~~~~~~vq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~r   80 (193)
T PF13632_consen    1 YVLFLDADTRLPPDFLERLVAALEDPKVDAVQGPIIFRNRGSLLTRLQDFEYAISHGLSRLSQSSLGRPLFLSGSGMLFR   80 (193)
T ss_pred             CEEEEcCCCCCChHHHHHHHHHHhCCCceEEEccEEecCCCChhheeehhhhhhhhhhhHHHHHhcCCCccccCcceeee
Confidence            689999999999998888887766211333334332110000000111100       00   01233556889999999


Q ss_pred             HHHHHHHHHhcccCCCCCCChhHHHHHHHhCCCeEeecC
Q psy10879        181 HLLVKFISENSHMLSSYISEDVSVGVWLSALDITRYHDV  219 (245)
Q Consensus       181 ~~~~~~l~~~~~~~~~~~~eDv~iG~~l~~~~v~~~~~~  219 (245)
                      +++++++-...  -.....||..++.-+.+.|.+....+
T Consensus        81 ~~~l~~vg~~~--~~~~~~ED~~l~~~l~~~G~~~~~~~  117 (193)
T PF13632_consen   81 REALREVGGFD--DPFSIGEDMDLGFRLRRAGYRIVYVP  117 (193)
T ss_pred             HHHHHHhCccc--ccccccchHHHHHHHHHCCCEEEEec
Confidence            99999875333  23455699999988888887665443

>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ]

Probab=93.01  E-value=5.3  Score=34.26  Aligned_cols=163  Identities=11%  Similarity=-0.029  Sum_probs=94.9

Q ss_pred             CcEEEEEEeecCchHHHHHHHHHhhhCCCEEEcCCc-cccCCchhHHHHHHHHHHHhccceeEEEEecCceeeehHHHHH
Q psy10879         50 YQVKYLFSIGNKENVVDVKLKEEIRRYDDILLLNQV-PDEYSSLSQKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIH  128 (245)
Q Consensus        50 ~~~~~~Fv~g~~~~~~~~~l~~E~~~~~Dii~~~d~-~d~y~~l~~K~~~~l~w~~~~~~~~~~~k~DDD~~v~~~~L~~  128 (245)
                      ..++++++=+.++.+..+.|.+..+.++-+..+... ....-+.    -.+..-..+.++.+|++..|.|+.+..+.+..
T Consensus        33 ~~~eiIvvd~~s~~~~~~~l~~~~~~~~~~~~i~~~~~~~~f~~----a~arN~g~~~A~~d~l~flD~D~i~~~~~i~~  108 (281)
T PF10111_consen   33 PDFEIIVVDDGSSDEFDEELKKLCEKNGFIRYIRHEDNGEPFSR----AKARNIGAKYARGDYLIFLDADCIPSPDFIEK  108 (281)
T ss_pred             CCEEEEEEECCCchhHHHHHHHHHhccCceEEEEcCCCCCCcCH----HHHHHHHHHHcCCCEEEEEcCCeeeCHHHHHH
Confidence            456777766655555556677777777766212211 1111121    23344445566899999999999999999999


Q ss_pred             HHh---hcCcCCcccEEEEecCCCeeec----C-C--CCcc--cC-ccc--CCCCC-CccCCCeeeecHHHHHHHHHhcc
Q psy10879        129 ELE---NKFHYEKKLYWGFFDGRARVRR----A-G--KWKE--KN-WFL--CDRYL-PYALGGGYVLSHLLVKFISENSH  192 (245)
Q Consensus       129 ~L~---~~~~~~~~~y~G~~~~~~~~~r----~-~--k~~~--~~-~~~--~~~yp-~y~~G~gyvlS~~~~~~l~~~~~  192 (245)
                      .+.   ........+.++-+.....+..    . .  .|..  .+ ...  .+.+. ....|++.+++++.-.++--...
T Consensus       109 ~~~~~~~l~~~~~~~~~~p~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~i~r~~f~~iGGfDE  188 (281)
T PF10111_consen  109 LLNHVKKLDKNPNAFLVYPCLYLSEEGSEKFYSQFKNLWDHEFLESFISGKNSLWEFIAFASSCFLINREDFLEIGGFDE  188 (281)
T ss_pred             HHHHHHHHhcCCCceEEEeeeeccchhhHHHhhcchhcchHHHHHHHhhccccccccccccceEEEEEHHHHHHhCCCCc
Confidence            888   4432213444443322111110    0 0  0110  00 000  11221 12346999999999998877776


Q ss_pred             cCCCCCCChhHHHHHHHhCCCeEe
Q psy10879        193 MLSSYISEDVSVGVWLSALDITRY  216 (245)
Q Consensus       193 ~~~~~~~eDv~iG~~l~~~~v~~~  216 (245)
                      .......||.-++.=|.+.|....
T Consensus       189 ~f~G~G~ED~D~~~RL~~~~~~~~  212 (281)
T PF10111_consen  189 RFRGWGYEDIDFGYRLKKAGYKFK  212 (281)
T ss_pred             cccCCCcchHHHHHHHHHcCCcEe
Confidence            677778999999877887776553

>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase

Probab=92.92  E-value=4.4  Score=33.07  Aligned_cols=111  Identities=11%  Similarity=-0.062  Sum_probs=60.4

Q ss_pred             ceeEEEEecCceeeehHHHHHHH---hhcCcCCcccEEEEe-cCCCeeecCCCCcccC------cccCCCC--CCccCCC
Q psy10879        108 DFQYLLKCDDDTFVRVPNIIHEL---ENKFHYEKKLYWGFF-DGRARVRRAGKWKEKN------WFLCDRY--LPYALGG  175 (245)
Q Consensus       108 ~~~~~~k~DDD~~v~~~~L~~~L---~~~~~~~~~~y~G~~-~~~~~~~r~~k~~~~~------~~~~~~y--p~y~~G~  175 (245)
                      +++|++..|+|+.+..+.|..++   ........-..+|.. ...........+....      .......  ..++.|+
T Consensus        75 ~~d~v~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (237)
T cd02526          75 GADYVLLFDQDSVPPPDMVEKLLAYKILSDKNSNIGAVGPRIIDRRTGENSPGVRKSGYKLRIQKEGEEGLKEVDFLITS  154 (237)
T ss_pred             CCCEEEEECCCCCcCHhHHHHHHHHHHhhccCCCeEEEeeeEEcCCCCeeccceeccCccceecccccCCceEeeeeecc
Confidence            57999999999999988888875   222221022233322 1111110000000000      0000111  1245678


Q ss_pred             eeeecHHHHHHHHHhcccCCCCCCChhHHHHHHHhCCCeEeecC
Q psy10879        176 GYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRYHDV  219 (245)
Q Consensus       176 gyvlS~~~~~~l~~~~~~~~~~~~eDv~iG~~l~~~~v~~~~~~  219 (245)
                      |.++++++++.+-...... ....||..++.-+...|.+....+
T Consensus       155 ~~~~rr~~~~~~ggfd~~~-~~~~eD~d~~~r~~~~G~~~~~~~  197 (237)
T cd02526         155 GSLISLEALEKVGGFDEDL-FIDYVDTEWCLRARSKGYKIYVVP  197 (237)
T ss_pred             ceEEcHHHHHHhCCCCHHH-cCccchHHHHHHHHHcCCcEEEEc
Confidence            8899999998874332211 234689999888888887665544

Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.

>COG1216 Predicted glycosyltransferases [General function prediction only]

Probab=92.69  E-value=6.2  Score=34.22  Aligned_cols=190  Identities=14%  Similarity=0.079  Sum_probs=101.0

Q ss_pred             eEEEEEeCCCCCHHHHHHHHHHHcCCcCCCcEEEEEEeecCc-hHHHHHHHHHhhhCCCEEEcCCccccCCchhHHHHHH
Q psy10879         21 FIVILILTSSKNYIRRKNIRDTWIKNIEKYQVKYLFSIGNKE-NVVDVKLKEEIRRYDDILLLNQVPDEYSSLSQKVLHS   99 (245)
Q Consensus        21 ~lli~V~S~~~~~~~R~~IR~TW~~~~~~~~~~~~Fv~g~~~-~~~~~~l~~E~~~~~Dii~~~d~~d~y~~l~~K~~~~   99 (245)
                      .+-++|.|--.-....+.++..=.....   ...+.++..++ +...+.+....  +.++..+. ..++.- ...=.-.+
T Consensus         4 ~i~~iiv~yn~~~~l~~~l~~l~~~~~~---~~~iv~vDn~s~d~~~~~~~~~~--~~~v~~i~-~~~NlG-~agg~n~g   76 (305)
T COG1216           4 KISIIIVTYNRGEDLVECLASLAAQTYP---DDVIVVVDNGSTDGSLEALKARF--FPNVRLIE-NGENLG-FAGGFNRG   76 (305)
T ss_pred             ceEEEEEecCCHHHHHHHHHHHhcCCCC---CcEEEEccCCCCCCCHHHHHhhc--CCcEEEEE-cCCCcc-chhhhhHH
Confidence            4455555554344444455554444431   12233555444 33233333222  67777553 222211 11112245


Q ss_pred             HHHHHhccceeEEEEecCceeeehHHHHHHHhhcCcCCcccEEEEecCCC----eeec-C-------CCCcccC------
Q psy10879        100 FKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGFFDGRA----RVRR-A-------GKWKEKN------  161 (245)
Q Consensus       100 l~w~~~~~~~~~~~k~DDD~~v~~~~L~~~L~~~~~~~~~~y~G~~~~~~----~~~r-~-------~k~~~~~------  161 (245)
                      ++.+...... |++..++|+.+..+-|.++++...........|......    .+.+ .       ..|....      
T Consensus        77 ~~~a~~~~~~-~~l~LN~D~~~~~~~l~~ll~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (305)
T COG1216          77 IKYALAKGDD-YVLLLNPDTVVEPDLLEELLKAAEEDPAAGVVGPLIRNYDESLYIDRRGGESDGLTGGWRASPLLEIAP  155 (305)
T ss_pred             HHHHhcCCCc-EEEEEcCCeeeChhHHHHHHHHHHhCCCCeEeeeeEecCCCCcchheeccccccccccceecccccccc
Confidence            5555444322 999999999999999999998876542344455433210    0110 0       1111111      


Q ss_pred             -cccCCCCCCccCCCeeeecHHHHHHHHHhcccCCCCCCChhHHHHHHHhCCCeEeecC
Q psy10879        162 -WFLCDRYLPYALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRYHDV  219 (245)
Q Consensus       162 -~~~~~~yp~y~~G~gyvlS~~~~~~l~~~~~~~~~~~~eDv~iG~~l~~~~v~~~~~~  219 (245)
                       .........++.|++.++++++++++-- ...-=....||+-++.=++++|.+..-.+
T Consensus       156 ~~~~~~~~~~~~~G~~~li~~~~~~~vG~-~de~~F~y~eD~D~~~R~~~~G~~i~~~p  213 (305)
T COG1216         156 DLSSYLEVVASLSGACLLIRREAFEKVGG-FDERFFIYYEDVDLCLRARKAGYKIYYVP  213 (305)
T ss_pred             cccchhhhhhhcceeeeEEcHHHHHHhCC-CCcccceeehHHHHHHHHHHcCCeEEEee
Confidence             0001112225789999999999999876 22222347999999999999997655433

>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis

Probab=92.56  E-value=3.1  Score=33.05  Aligned_cols=116  Identities=10%  Similarity=-0.010  Sum_probs=64.2

Q ss_pred             HHHHHHhccceeEEEEecCceeeehHHHHHHHhhcCcC-CcccEEEEecC---CCeeecCCCCccc---Cccc-CCCCCC
Q psy10879         99 SFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHY-EKKLYWGFFDG---RARVRRAGKWKEK---NWFL-CDRYLP  170 (245)
Q Consensus        99 ~l~w~~~~~~~~~~~k~DDD~~v~~~~L~~~L~~~~~~-~~~~y~G~~~~---~~~~~r~~k~~~~---~~~~-~~~yp~  170 (245)
                      ++......++.+|++..|+|..+..+.|...+...... ...++.|....   ...... .+....   ..+. ....-+
T Consensus        71 a~N~g~~~a~gd~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  149 (201)
T cd04195          71 ALNEGLKHCTYDWVARMDTDDISLPDRFEKQLDFIEKNPEIDIVGGGVLEFDSDGNDIG-KRRLPTSHDDILKFARRRSP  149 (201)
T ss_pred             HHHHHHHhcCCCEEEEeCCccccCcHHHHHHHHHHHhCCCeEEEcccEEEECCCCCeec-cccCCCCHHHHHHHhccCCC
Confidence            34455555689999999999999998888888775322 13455554321   111110 010000   0000 000011


Q ss_pred             ccCCCeeeecHHHHHHHHHhcccCCCCCCChhHHHHHHHhCCCeEeecC
Q psy10879        171 YALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRYHDV  219 (245)
Q Consensus       171 y~~G~gyvlS~~~~~~l~~~~~~~~~~~~eDv~iG~~l~~~~v~~~~~~  219 (245)
                       ..|++.++.+.+++++-...   +....||..+..-+...|......+
T Consensus       150 -~~~~~~~~rr~~~~~~g~~~---~~~~~eD~~~~~r~~~~g~~~~~~~  194 (201)
T cd04195         150 -FNHPTVMFRKSKVLAVGGYQ---DLPLVEDYALWARMLANGARFANLP  194 (201)
T ss_pred             -CCChHHhhhHHHHHHcCCcC---CCCCchHHHHHHHHHHcCCceeccc
Confidence             23566777777776653322   2267899999888877776655443

AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.

>cd06423 CESA_like CESA_like is the cellulose synthase superfamily

Probab=92.35  E-value=1.4  Score=33.27  Aligned_cols=93  Identities=9%  Similarity=-0.088  Sum_probs=51.0

Q ss_pred             HHHHHHHHhccceeEEEEecCceeeehHHHHHHHhhcCcC-CcccEEEEecCCCe---eecC---CCCccc-C----ccc
Q psy10879         97 LHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHY-EKKLYWGFFDGRAR---VRRA---GKWKEK-N----WFL  164 (245)
Q Consensus        97 ~~~l~w~~~~~~~~~~~k~DDD~~v~~~~L~~~L~~~~~~-~~~~y~G~~~~~~~---~~r~---~k~~~~-~----~~~  164 (245)
                      -..+.+..+.++.+|++.+|+|..+..+.|..++...... .-.+..|.......   ....   ..+... .    ...
T Consensus        67 ~~~~n~~~~~~~~~~i~~~D~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (180)
T cd06423          67 AGALNAGLRHAKGDIVVVLDADTILEPDALKRLVVPFFADPKVGAVQGRVRVRNGSENLLTRLQAIEYLSIFRLGRRAQS  146 (180)
T ss_pred             hHHHHHHHHhcCCCEEEEECCCCCcChHHHHHHHHHhccCCCeeeEeeeEEEecCcCcceeccchheecceeeeeeehhh
Confidence            3455555666689999999999999877777774554332 12344444321111   0100   000000 0    000


Q ss_pred             CCCCCCccCCCeeeecHHHHHHHHH
Q psy10879        165 CDRYLPYALGGGYVLSHLLVKFISE  189 (245)
Q Consensus       165 ~~~yp~y~~G~gyvlS~~~~~~l~~  189 (245)
                      .......+.|+++++++++++++-.
T Consensus       147 ~~~~~~~~~g~~~~~~~~~~~~~gg  171 (180)
T cd06423         147 ALGGVLVLSGAFGAFRREALREVGG  171 (180)
T ss_pred             eecceeecCchHHHHHHHHHHHhCC
Confidence            1223346789999999999887643

The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the

>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1

Probab=92.22  E-value=5.2  Score=32.25  Aligned_cols=113  Identities=12%  Similarity=-0.056  Sum_probs=61.5

Q ss_pred             HHHhccceeEEEEecCceeeehHHHHHHHhh-cCcCCcccEEEEecCCCeeecCCCCcc--------cCccc---CCCCC
Q psy10879        102 YIYEHFDFQYLLKCDDDTFVRVPNIIHELEN-KFHYEKKLYWGFFDGRARVRRAGKWKE--------KNWFL---CDRYL  169 (245)
Q Consensus       102 w~~~~~~~~~~~k~DDD~~v~~~~L~~~L~~-~~~~~~~~y~G~~~~~~~~~r~~k~~~--------~~~~~---~~~yp  169 (245)
                      ...+....+|++.+|+|..+..+.|..++.. ..+. ..+..|.........  ..|..        ...+.   ...-.
T Consensus        72 ~g~~~a~gd~i~~lD~D~~~~~~~l~~l~~~~~~~~-~~~v~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (224)
T cd06442          72 EGFKAARGDVIVVMDADLSHPPEYIPELLEAQLEGG-ADLVIGSRYVEGGGV--EGWGLKRKLISRGANLLARLLLGRKV  148 (224)
T ss_pred             HHHHHcCCCEEEEEECCCCCCHHHHHHHHHHHhcCC-CCEEEEeeeecCCcc--CCCcHHHHHHHHHHHHHHHHHcCCCC
Confidence            3334455699999999999998888888876 3333 556666543211111  11110        00000   01112


Q ss_pred             CccCCCeeeecHHHHHHHHHhcccCCCCCCChhHHHHHHHhCCCeEeecC
Q psy10879        170 PYALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRYHDV  219 (245)
Q Consensus       170 ~y~~G~gyvlS~~~~~~l~~~~~~~~~~~~eDv~iG~~l~~~~v~~~~~~  219 (245)
                      +.+.|++.++++++++++....  ......+|.-+..-+.+.|......+
T Consensus       149 ~~~~~~~~~~~r~~~~~ig~~~--~~~~~~~~~~l~~~~~~~g~~i~~~p  196 (224)
T cd06442         149 SDPTSGFRAYRREVLEKLIDSL--VSKGYKFQLELLVRARRLGYRIVEVP  196 (224)
T ss_pred             CCCCCccchhhHHHHHHHhhhc--cCCCcEEeHHHHHHHHHcCCeEEEeC
Confidence            3467888899999999987221  11112223334444556666655544

Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,

>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase

Probab=92.21  E-value=2.7  Score=34.38  Aligned_cols=120  Identities=13%  Similarity=0.015  Sum_probs=69.6

Q ss_pred             HHHHHHHhcc--ceeEEEEecCceeeehHHHHHHHhhcCcCCcccEEEEecC-CC--eee-cCCCCcccCccc----C-C
Q psy10879         98 HSFKYIYEHF--DFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGFFDG-RA--RVR-RAGKWKEKNWFL----C-D  166 (245)
Q Consensus        98 ~~l~w~~~~~--~~~~~~k~DDD~~v~~~~L~~~L~~~~~~~~~~y~G~~~~-~~--~~~-r~~k~~~~~~~~----~-~  166 (245)
                      .++.+..+.+  +++|++..|+|+.+..+.|.+++.......-.+..|.... ..  .+. +...|.....+.    . .
T Consensus        72 ~a~n~g~~~a~~~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (236)
T cd06435          72 GALNYALERTAPDAEIIAVIDADYQVEPDWLKRLVPIFDDPRVGFVQAPQDYRDGEESLFKRMCYAEYKGFFDIGMVSRN  151 (236)
T ss_pred             HHHHHHHHhcCCCCCEEEEEcCCCCcCHHHHHHHHHHhcCCCeeEEecCccccCCCccHHHHHHhHHHHHHHHHHhcccc
Confidence            3566666666  4799999999999999999988877643212222221110 00  000 000010000000    0 0


Q ss_pred             CC-CCccCCCeeeecHHHHHHHHHhcccCCCCCCChhHHHHHHHhCCCeEeecCC
Q psy10879        167 RY-LPYALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRYHDVR  220 (245)
Q Consensus       167 ~y-p~y~~G~gyvlS~~~~~~l~~~~~~~~~~~~eDv~iG~~l~~~~v~~~~~~~  220 (245)
                      .. -.++.|++.++++++++.+-....   .+..||..++.=+.+.|.+....+.
T Consensus       152 ~~~~~~~~g~~~~~rr~~~~~iGgf~~---~~~~eD~dl~~r~~~~G~~~~~~~~  203 (236)
T cd06435         152 ERNAIIQHGTMCLIRRSALDDVGGWDE---WCITEDSELGLRMHEAGYIGVYVAQ  203 (236)
T ss_pred             ccCceEEecceEEEEHHHHHHhCCCCC---ccccchHHHHHHHHHCCcEEEEcch
Confidence            00 124678889999999998743222   2357999999888888887765543

NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.

>PRK14716 bacteriophage N4 adsorption protein B; Provisional

Probab=91.97  E-value=11  Score=35.47  Aligned_cols=193  Identities=13%  Similarity=0.114  Sum_probs=96.2

Q ss_pred             CCeeEEEEEeCCCCCHHHHHHHHHHHcCCcCCCcEEEEEEeecCchHHHHHHHHHhhhCCCEEEcCCccccCCchhHHHH
Q psy10879         18 HSYFIVILILTSSKNYIRRKNIRDTWIKNIEKYQVKYLFSIGNKENVVDVKLKEEIRRYDDILLLNQVPDEYSSLSQKVL   97 (245)
Q Consensus        18 ~~~~lli~V~S~~~~~~~R~~IR~TW~~~~~~~~~~~~Fv~g~~~~~~~~~l~~E~~~~~Dii~~~d~~d~y~~l~~K~~   97 (245)
                      +.+.+-|+|+.--+..--.+.|+..=.+.. ..+.+++++.....++..+.+++=+.+|..+..+- ...  .+-+-|.-
T Consensus        64 ~~p~vaIlIPA~NE~~vI~~~l~s~L~~ld-Y~~~eIiVv~d~ndd~T~~~v~~l~~~~p~v~~vv-~~~--~gp~~Ka~  139 (504)
T PRK14716         64 PEKRIAIFVPAWREADVIGRMLEHNLATLD-YENYRIFVGTYPNDPATLREVDRLAARYPRVHLVI-VPH--DGPTSKAD  139 (504)
T ss_pred             CCCceEEEEeccCchhHHHHHHHHHHHcCC-CCCeEEEEEECCCChhHHHHHHHHHHHCCCeEEEE-eCC--CCCCCHHH
Confidence            355666666665443323334443311111 12344444443222333344443356677653221 111  11123433


Q ss_pred             HHHHHHH------hcc---ceeEEEEecCceeeehHHHHHHHhhcCcCCcccEEEEecCCCeeecCCCC----cccCccc
Q psy10879         98 HSFKYIY------EHF---DFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGFFDGRARVRRAGKW----KEKNWFL  164 (245)
Q Consensus        98 ~~l~w~~------~~~---~~~~~~k~DDD~~v~~~~L~~~L~~~~~~~~~~y~G~~~~~~~~~r~~k~----~~~~~~~  164 (245)
                       .+.|+.      +.+   ++++++..|-|..+.++.|..+- ...+. ..+.-..+.....  ..+.|    +..++..
T Consensus       140 -aLN~~l~~~~~~e~~~G~~~d~vvi~DAD~~v~Pd~Lr~~~-~~~~~-~~~VQ~pv~~~~~--~~~~~~ag~y~~ef~~  214 (504)
T PRK14716        140 -CLNWIYQAIFAFERERGIRFAIIVLHDAEDVIHPLELRLYN-YLLPR-HDFVQLPVFSLPR--DWGEWVAGTYMDEFAE  214 (504)
T ss_pred             -HHHHHHHHHHHhhhhcCCCcCEEEEEcCCCCcCccHHHHHH-hhcCC-CCEEecceeccCC--chhHHHHHHHHHHHHH
Confidence             333332      222   46999999999999998887643 33332 2221111111100  01111    1111100


Q ss_pred             --------CCC--CCCccCCCeeeecHHHHHHHHHhcc---cCCCCCCChhHHHHHHHhCCCeEeecC
Q psy10879        165 --------CDR--YLPYALGGGYVLSHLLVKFISENSH---MLSSYISEDVSVGVWLSALDITRYHDV  219 (245)
Q Consensus       165 --------~~~--yp~y~~G~gyvlS~~~~~~l~~~~~---~~~~~~~eDv~iG~~l~~~~v~~~~~~  219 (245)
                              -+.  -+-.+.|.|+++++++++++.....   ..+..--||..+|.-+...|.+..-.+
T Consensus       215 ~~~~~l~~r~~LG~~~~~~Gtg~afRR~aLe~l~~~~GG~~fd~~sLTED~dLglRL~~~G~rv~y~p  282 (504)
T PRK14716        215 SHLKDLPVREALGGLIPSAGVGTAFSRRALERLAAERGGQPFDSDSLTEDYDIGLRLKRAGFRQIFVR  282 (504)
T ss_pred             HHHHHHHHHHhcCCccccCCeeEEeEHHHHHHHHhhcCCCCCCCCCcchHHHHHHHHHHCCCEEEEec
Confidence                    011  1224679999999999999865332   223456899999999999998876543

>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1

Probab=89.35  E-value=4.5  Score=31.59  Aligned_cols=132  Identities=11%  Similarity=0.032  Sum_probs=71.7

Q ss_pred             cEEEEEEeecCchHHHHHHHHHhhhCCCEEEcCCccccCCchhHHHHHHHHHHHhccceeEEEEecCceeeehHHHHHHH
Q psy10879         51 QVKYLFSIGNKENVVDVKLKEEIRRYDDILLLNQVPDEYSSLSQKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHEL  130 (245)
Q Consensus        51 ~~~~~Fv~g~~~~~~~~~l~~E~~~~~Dii~~~d~~d~y~~l~~K~~~~l~w~~~~~~~~~~~k~DDD~~v~~~~L~~~L  130 (245)
                      ..+++.+-+.+.+...+.+....+++..+..+. ..   .|. .+ -.++....+....+|++.+|+|.....+-|..++
T Consensus        29 ~~eiivvdd~s~d~t~~~~~~~~~~~~~i~~i~-~~---~n~-G~-~~a~n~g~~~a~~d~i~~~D~D~~~~~~~l~~l~  102 (181)
T cd04187          29 DYEIIFVDDGSTDRTLEILRELAARDPRVKVIR-LS---RNF-GQ-QAALLAGLDHARGDAVITMDADLQDPPELIPEML  102 (181)
T ss_pred             CeEEEEEeCCCCccHHHHHHHHHhhCCCEEEEE-ec---CCC-Cc-HHHHHHHHHhcCCCEEEEEeCCCCCCHHHHHHHH
Confidence            356566555444333333444444555554332 12   221 11 2344444455667999999999999888788888


Q ss_pred             hhcCcCCcccEEEEecCCCeeecCCCCcc------cCcccCCCCCCccCCCeeeecHHHHHHHHHhc
Q psy10879        131 ENKFHYEKKLYWGFFDGRARVRRAGKWKE------KNWFLCDRYLPYALGGGYVLSHLLVKFISENS  191 (245)
Q Consensus       131 ~~~~~~~~~~y~G~~~~~~~~~r~~k~~~------~~~~~~~~yp~y~~G~gyvlS~~~~~~l~~~~  191 (245)
                      +..... ..+.+|.......+. ..++..      .... ....-+...|++.++++.+++.+....
T Consensus       103 ~~~~~~-~~~v~g~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~r~~~~~i~~~d  166 (181)
T cd04187         103 AKWEEG-YDVVYGVRKNRKESW-LKRLTSKLFYRLINKL-SGVDIPDNGGDFRLMDRKVVDALLLLP  166 (181)
T ss_pred             HHHhCC-CcEEEEEecCCcchH-HHHHHHHHHHHHHHHH-cCCCCCCCCCCEEEEcHHHHHHHHhcC
Confidence            775554 567777654321100 001100      0000 111123466888999999999887544

A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.

>TIGR01556 rhamnosyltran L-rhamnosyltransferase

Probab=88.63  E-value=13  Score=31.54  Aligned_cols=117  Identities=12%  Similarity=0.052  Sum_probs=61.1

Q ss_pred             HHHHHHHhccceeEEEEecCceeeehHHHHHHHhhcCcCC-cccEEEE-ecCCCeee-----cCCCCcccCcccC---CC
Q psy10879         98 HSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHYE-KKLYWGF-FDGRARVR-----RAGKWKEKNWFLC---DR  167 (245)
Q Consensus        98 ~~l~w~~~~~~~~~~~k~DDD~~v~~~~L~~~L~~~~~~~-~~~y~G~-~~~~~~~~-----r~~k~~~~~~~~~---~~  167 (245)
                      .+++++.+ .+++|++..|||+.+..+.|..++....... ...++|- +.......     +...+........   ..
T Consensus        64 ~Gi~~a~~-~~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (281)
T TIGR01556        64 QGLDASFR-RGVQGVLLLDQDSRPGNAFLAAQWKLLSAENGQACALGPRFFDRGTSRRLPAIHLDGLLLRQISLDGLTTP  142 (281)
T ss_pred             HHHHHHHH-CCCCEEEEECCCCCCCHHHHHHHHHHHHhcCCceEEECCeEEcCCCcccCCceeecccceeeecccccCCc
Confidence            35555532 2789999999999999887777776554320 1223332 11111000     0000000000000   00


Q ss_pred             C-CCccCCCeeeecHHHHHHHHHhcccCCCCCCChhHHHHHHHhCCCeEe
Q psy10879        168 Y-LPYALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRY  216 (245)
Q Consensus       168 y-p~y~~G~gyvlS~~~~~~l~~~~~~~~~~~~eDv~iG~~l~~~~v~~~  216 (245)
                      . ..++.++|.++++++++++-.-.... .+..||+-+..=+.+.|.+..
T Consensus       143 ~~~~~~~~sg~li~~~~~~~iG~fde~~-fi~~~D~e~~~R~~~~G~~i~  191 (281)
T TIGR01556       143 QKTSFLISSGCLITREVYQRLGMMDEEL-FIDHVDTEWSLRAQNYGIPLY  191 (281)
T ss_pred             eeccEEEcCcceeeHHHHHHhCCccHhh-cccchHHHHHHHHHHCCCEEE
Confidence            1 12445667789999998874321111 235689988766677776544

Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.

>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function

Probab=86.46  E-value=6.1  Score=31.78  Aligned_cols=105  Identities=15%  Similarity=-0.066  Sum_probs=59.2

Q ss_pred             HHhccceeEEEEecCceeeehHHHHHHHhhcCcCCcccEEEEecC----CCeeec--CCCCcccCcccCCCCCCccCCCe
Q psy10879        103 IYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGFFDG----RARVRR--AGKWKEKNWFLCDRYLPYALGGG  176 (245)
Q Consensus       103 ~~~~~~~~~~~k~DDD~~v~~~~L~~~L~~~~~~~~~~y~G~~~~----~~~~~r--~~k~~~~~~~~~~~yp~y~~G~g  176 (245)
                      ..+.++.+|++.+|+|..+..+.+..++......  ...+|....    .....+  ..++....   .....+ .++.+
T Consensus        67 g~~~a~~~~i~~~D~D~~~~~~~l~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~  140 (221)
T cd02522          67 GAAAARGDWLLFLHADTRLPPDWDAAIIETLRAD--GAVAGAFRLRFDDPGPRLRLLELGANLRS---RLFGLP-YGDQG  140 (221)
T ss_pred             HHHhccCCEEEEEcCCCCCChhHHHHHHHHhhcC--CcEEEEEEeeecCCccchhhhhhccccee---cccCCC-cCCce
Confidence            3344578999999999999887777766655443  333343211    110101  00000000   000111 24568


Q ss_pred             eeecHHHHHHHHHhcccCCCCCCChhHHHHHHHhCCCeEe
Q psy10879        177 YVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRY  216 (245)
Q Consensus       177 yvlS~~~~~~l~~~~~~~~~~~~eDv~iG~~l~~~~v~~~  216 (245)
                      .++++++.+.+-.....   +..||.-++.-+.+.|....
T Consensus       141 ~~~r~~~~~~~G~fd~~---~~~ED~d~~~r~~~~G~~~~  177 (221)
T cd02522         141 LFIRRELFEELGGFPEL---PLMEDVELVRRLRRRGRPAL  177 (221)
T ss_pred             EEEEHHHHHHhCCCCcc---ccccHHHHHHHHHhCCCEEE
Confidence            89999988877543322   27899988877777775543

Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming)

Probab=86.09  E-value=37  Score=33.45  Aligned_cols=116  Identities=14%  Similarity=0.091  Sum_probs=67.5

Q ss_pred             HHHHHHhccceeEEEEecCceeeehHHHHHHHhhcCcCCcc-cEEEEec--CCCee-ecC-CCCc-cc-C---ccc----
Q psy10879         99 SFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHYEKK-LYWGFFD--GRARV-RRA-GKWK-EK-N---WFL----  164 (245)
Q Consensus        99 ~l~w~~~~~~~~~~~k~DDD~~v~~~~L~~~L~~~~~~~~~-~y~G~~~--~~~~~-~r~-~k~~-~~-~---~~~----  164 (245)
                      .+....++.+.+|++..|.|+.+..+-|.+.+.....+ .. ..++...  .+..+ .++ +... .+ +   +|.    
T Consensus       219 nLN~al~~a~gd~Il~lDAD~v~~pd~L~~~v~~f~~d-p~v~~Vqtp~~f~~p~~~~~nl~~~~~~~~e~~~f~~~i~~  297 (713)
T TIGR03030       219 NINNALKHTDGELILIFDADHVPTRDFLQRTVGWFVED-PKLFLVQTPHFFVSPDPIERNLGTFRRMPNENELFYGLIQD  297 (713)
T ss_pred             HHHHHHHhcCCCEEEEECCCCCcChhHHHHHHHHHHhC-CCEEEEeCCeeccCCCHHhhhhHHHHHhhhHHHHHHHHHHH
Confidence            34555666788999999999999999888888765322 22 2222111  11111 111 0000 00 0   010    


Q ss_pred             -CCCC-CCccCCCeeeecHHHHHHHHHhcccCCCCCCChhHHHHHHHhCCCeEeec
Q psy10879        165 -CDRY-LPYALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRYHD  218 (245)
Q Consensus       165 -~~~y-p~y~~G~gyvlS~~~~~~l~~~~~~~~~~~~eDv~iG~~l~~~~v~~~~~  218 (245)
                       .+.+ ..++.|++.++.|++++.+--..   .....||..+|.-+...|.+....
T Consensus       298 g~~~~~~~~~~Gs~~~iRR~al~~iGGf~---~~~vtED~~l~~rL~~~G~~~~y~  350 (713)
T TIGR03030       298 GNDFWNAAFFCGSAAVLRREALDEIGGIA---GETVTEDAETALKLHRRGWNSAYL  350 (713)
T ss_pred             HHhhhCCeeecCceeEEEHHHHHHcCCCC---CCCcCcHHHHHHHHHHcCCeEEEe
Confidence             0111 23566889999999998763222   122479999999999888875543

Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.

>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional

Probab=85.81  E-value=38  Score=33.50  Aligned_cols=190  Identities=9%  Similarity=0.070  Sum_probs=100.0

Q ss_pred             CCeeEEEEEeCCCCCHHHHHHHHHHHcCCcCCCcEEEEEEeecCchHHHHHHHHHhhhCCCEEEcCCccccCCchhHHHH
Q psy10879         18 HSYFIVILILTSSKNYIRRKNIRDTWIKNIEKYQVKYLFSIGNKENVVDVKLKEEIRRYDDILLLNQVPDEYSSLSQKVL   97 (245)
Q Consensus        18 ~~~~lli~V~S~~~~~~~R~~IR~TW~~~~~~~~~~~~Fv~g~~~~~~~~~l~~E~~~~~Dii~~~d~~d~y~~l~~K~~   97 (245)
                      +.+.+-|+|+.--+..--.+.|...=. ..+..+.+++++.....+...+.+++-.++|+++..+..-... +  +.|. 
T Consensus        61 ~~~~vsIlVPa~nE~~vi~~~i~~ll~-~ldYP~~eI~vi~~~nD~~T~~~~~~l~~~~p~~~~v~~~~~g-~--~gKa-  135 (727)
T PRK11234         61 DEKPLAIMVPAWNETGVIGNMAELAAT-TLDYENYHIFVGTYPNDPATQADVDAVCARFPNVHKVVCARPG-P--TSKA-  135 (727)
T ss_pred             CCCCEEEEEecCcchhhHHHHHHHHHH-hCCCCCeEEEEEecCCChhHHHHHHHHHHHCCCcEEEEeCCCC-C--CCHH-
Confidence            446677777764444333333333211 2222235556655422244445556556778875322111111 1  2343 


Q ss_pred             HHHHHHHhcc---------ceeEEEEecCceeeehHHHHHHHhhcCcCCcccEEEEecCCCeeecC-CCC----cccCcc
Q psy10879         98 HSFKYIYEHF---------DFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGFFDGRARVRRA-GKW----KEKNWF  163 (245)
Q Consensus        98 ~~l~w~~~~~---------~~~~~~k~DDD~~v~~~~L~~~L~~~~~~~~~~y~G~~~~~~~~~r~-~k~----~~~~~~  163 (245)
                      .++.|+...+         +++.++..|-|+.|.++.|. .+...... ....-+-..   +..++ +.|    +..++.
T Consensus       136 ~aLN~~l~~~~~~e~~~~~~~~vvvi~DAD~~v~pd~L~-~~~~l~~~-~~~VQ~p~~---p~~~~~~~~~~~~~~~EFa  210 (727)
T PRK11234        136 DCLNNVLDAITQFERSANFAFAGFILHDAEDVISPMELR-LFNYLVER-KDLIQIPVY---PFEREWTHFTSGTYIDEFA  210 (727)
T ss_pred             HHHHHHHHHHHhhhcccCCcccEEEEEcCCCCCChhHHH-HHHhhcCC-CCeEeeccc---CCCccHHHHHHHHHHHHHH
Confidence            3344444432         34567889999999999997 44444432 222222111   11111 111    111111


Q ss_pred             ----c----CCC--CCCccCCCeeeecHHHHHHHHHhc---ccCCCCCCChhHHHHHHHhCCCeEee
Q psy10879        164 ----L----CDR--YLPYALGGGYVLSHLLVKFISENS---HMLSSYISEDVSVGVWLSALDITRYH  217 (245)
Q Consensus       164 ----~----~~~--yp~y~~G~gyvlS~~~~~~l~~~~---~~~~~~~~eDv~iG~~l~~~~v~~~~  217 (245)
                          .    ...  -+-.++|.|+.+||.+++.+....   ......--||.-+|.-+...|.+..-
T Consensus       211 ~~~~~~~~~~~~lgg~~~l~G~~~af~Rr~l~al~~~ggg~~~~~~~lTED~dlg~rL~~~G~~v~f  277 (727)
T PRK11234        211 ELHGKDVPVREALAGQVPSAGVGTCFSRRAVTALLEDGDGIAFDVQSLTEDYDIGFRLKEKGMREIF  277 (727)
T ss_pred             HHhhhhhHHHHHcCCCcccCCceEEEecccHHHHHHhcCCCCcCCCcchHHHHHHHHHHHCCCEEEE
Confidence                0    011  233578999999999877776655   33445568999999999999987653

>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily

Probab=85.21  E-value=7.6  Score=30.14  Aligned_cols=130  Identities=8%  Similarity=-0.060  Sum_probs=67.6

Q ss_pred             EEEEEEeecCchHHHHHHHHHhhhCCCEEEcCCccccCCchhHHHHHHHHHHHhccceeEEEEecCceeeehHHHHHHHh
Q psy10879         52 VKYLFSIGNKENVVDVKLKEEIRRYDDILLLNQVPDEYSSLSQKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELE  131 (245)
Q Consensus        52 ~~~~Fv~g~~~~~~~~~l~~E~~~~~Dii~~~d~~d~y~~l~~K~~~~l~w~~~~~~~~~~~k~DDD~~v~~~~L~~~L~  131 (245)
                      .+++.+-..+.+.....+.+..+++..+..+. ..... +    .-.++....+....+|++..|+|..+..+.|..++.
T Consensus        29 ~eiivvd~~s~d~~~~~~~~~~~~~~~~~~~~-~~~n~-G----~~~a~n~g~~~a~gd~i~~lD~D~~~~~~~l~~l~~  102 (185)
T cd04179          29 YEIIVVDDGSTDGTAEIARELAARVPRVRVIR-LSRNF-G----KGAAVRAGFKAARGDIVVTMDADLQHPPEDIPKLLE  102 (185)
T ss_pred             EEEEEEcCCCCCChHHHHHHHHHhCCCeEEEE-ccCCC-C----ccHHHHHHHHHhcCCEEEEEeCCCCCCHHHHHHHHH
Confidence            44454444443333444444455555543221 12221 1    123334444455569999999999999888888888


Q ss_pred             h-cCcCCcccEEEEecCCCeee-cC--CCCc---ccCc-ccCCCCC-CccCCCeeeecHHHHHHHH
Q psy10879        132 N-KFHYEKKLYWGFFDGRARVR-RA--GKWK---EKNW-FLCDRYL-PYALGGGYVLSHLLVKFIS  188 (245)
Q Consensus       132 ~-~~~~~~~~y~G~~~~~~~~~-r~--~k~~---~~~~-~~~~~yp-~y~~G~gyvlS~~~~~~l~  188 (245)
                      . .... ..+.+|......... ..  .++.   .... ......+ ....|+.+++++++++.+-
T Consensus       103 ~~~~~~-~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~i~  167 (185)
T cd04179         103 KLLEGG-ADVVIGSRFVRGGGAGMPLLRRLGSRLFNFLIRLLLGVRISDTQSGFRLFRREVLEALL  167 (185)
T ss_pred             HHhccC-CcEEEEEeecCCCcccchHHHHHHHHHHHHHHHHHcCCCCcCCCCceeeeHHHHHHHHH
Confidence            6 3333 567777644221100 00  0010   0000 0001122 2356778899999999986

DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex

>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

Probab=84.65  E-value=13  Score=26.97  Aligned_cols=85  Identities=15%  Similarity=-0.002  Sum_probs=50.3

Q ss_pred             HHHHHHHhccceeEEEEecCceeeehHHHHHHHhhcCcCCcccEEEEecCCCeeecCCCCcccCcccCCCCCCccCCCee
Q psy10879         98 HSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGFFDGRARVRRAGKWKEKNWFLCDRYLPYALGGGY  177 (245)
Q Consensus        98 ~~l~w~~~~~~~~~~~k~DDD~~v~~~~L~~~L~~~~~~~~~~y~G~~~~~~~~~r~~k~~~~~~~~~~~yp~y~~G~gy  177 (245)
                      .++..+.+.++.+|++.+|+|..+..+.+...+...........++.                             .+++
T Consensus        67 ~~~~~~~~~~~~d~v~~~d~D~~~~~~~~~~~~~~~~~~~~~~~v~~-----------------------------~~~~  117 (156)
T cd00761          67 AARNAGLKAARGEYILFLDADDLLLPDWLERLVAELLADPEADAVGG-----------------------------PGNL  117 (156)
T ss_pred             HHHHHHHHHhcCCEEEEECCCCccCccHHHHHHHHHhcCCCceEEec-----------------------------cchh
Confidence            33344444448999999999999988888876444332201111111                             0678


Q ss_pred             eecHHHHHHHHHhcccCCCCCCChhHHHHHHHhCC
Q psy10879        178 VLSHLLVKFISENSHMLSSYISEDVSVGVWLSALD  212 (245)
Q Consensus       178 vlS~~~~~~l~~~~~~~~~~~~eDv~iG~~l~~~~  212 (245)
                      ++++++++.+......... ..||..++.-+...|
T Consensus       118 ~~~~~~~~~~~~~~~~~~~-~~ed~~~~~~~~~~g  151 (156)
T cd00761         118 LFRRELLEEIGGFDEALLS-GEEDDDFLLRLLRGG  151 (156)
T ss_pred             eeeHHHHHHhCCcchHhcC-CcchHHHHHHHHhhc
Confidence            8888888876544332221 267777765555443

Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als

>PRK05454 glucosyltransferase MdoH; Provisional

Probab=84.16  E-value=24  Score=34.67  Aligned_cols=198  Identities=9%  Similarity=0.036  Sum_probs=106.8

Q ss_pred             CCCCCeeEEEEEeCCCCCHHH-HHHHHHHHcCCc---CCCcEEEEEEeecCc-hHHH----HHHHHHhhhC---CCEEEc
Q psy10879         15 NLKHSYFIVILILTSSKNYIR-RKNIRDTWIKNI---EKYQVKYLFSIGNKE-NVVD----VKLKEEIRRY---DDILLL   82 (245)
Q Consensus        15 ~c~~~~~lli~V~S~~~~~~~-R~~IR~TW~~~~---~~~~~~~~Fv~g~~~-~~~~----~~l~~E~~~~---~Dii~~   82 (245)
                      ..+..+++.|+|++.-+..++ ++.|+.+..+-.   ...+.++ |++..+. ++..    ..+.+-.+++   +.+...
T Consensus       119 ~~~~~~~VaVliP~yNEd~~~v~~~L~a~~~Sl~~~~~~~~~e~-~vLdD~~d~~~~~~e~~~~~~L~~~~~~~~~i~yr  197 (691)
T PRK05454        119 PPPPEARTAILMPIYNEDPARVFAGLRAMYESLAATGHGAHFDF-FILSDTRDPDIAAAEEAAWLELRAELGGEGRIFYR  197 (691)
T ss_pred             CCCCCCceEEEEeCCCCChHHHHHHHHHHHHHHHhcCCCCCEEE-EEEECCCChhHHHHHHHHHHHHHHhcCCCCcEEEE
Confidence            455667888888888766543 346666664321   1223454 7777766 3321    1122223344   345532


Q ss_pred             CCccccCCchhHHHHHHHHHHHhcc-ceeEEEEecCceeeehHHHHHHHhhcCcCCcccEEEEecCCCeeec-CCCCccc
Q psy10879         83 NQVPDEYSSLSQKVLHSFKYIYEHF-DFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGFFDGRARVRR-AGKWKEK  160 (245)
Q Consensus        83 ~d~~d~y~~l~~K~~~~l~w~~~~~-~~~~~~k~DDD~~v~~~~L~~~L~~~~~~~~~~y~G~~~~~~~~~r-~~k~~~~  160 (245)
                      .    -..|.-+|.-..-.++.... +++|++-.|-|+.+..+.|.+.+..+..+ ..  +|-+.....+.. ++-+..-
T Consensus       198 ~----R~~n~~~KaGNl~~~~~~~~~~~eyivvLDADs~m~~d~L~~lv~~m~~d-P~--vGlVQt~~~~~n~~slfaR~  270 (691)
T PRK05454        198 R----RRRNVGRKAGNIADFCRRWGGAYDYMVVLDADSLMSGDTLVRLVRLMEAN-PR--AGLIQTLPVAVGADTLFARL  270 (691)
T ss_pred             E----CCcCCCccHHHHHHHHHhcCCCcCEEEEEcCCCCCCHHHHHHHHHHHhhC-cC--EEEEeCCccCcCCCCHHHHH
Confidence            1    11333357666666664333 78999999999999999999999876432 22  344332211111 1101000


Q ss_pred             CcccCCCCC--------------CccCCCeeeecHHHHHHHHH-----hccc-CCCCCCChhHHHHHHHhCCCeEeecCC
Q psy10879        161 NWFLCDRYL--------------PYALGGGYVLSHLLVKFISE-----NSHM-LSSYISEDVSVGVWLSALDITRYHDVR  220 (245)
Q Consensus       161 ~~~~~~~yp--------------~y~~G~gyvlS~~~~~~l~~-----~~~~-~~~~~~eDv~iG~~l~~~~v~~~~~~~  220 (245)
                      ..+....|-              -.+.|...++.+++....-.     .... -...-.||...|..+...|-+.+..+.
T Consensus       271 qqf~~~~y~~~~~~G~~~w~~~~g~f~G~naIiR~~af~~~~glp~L~g~~p~~~~~LseD~~~a~~l~~~GyrV~~~pd  350 (691)
T PRK05454        271 QQFATRVYGPLFAAGLAWWQGGEGNYWGHNAIIRVKAFAEHCGLPPLPGRGPFGGHILSHDFVEAALMRRAGWGVWLAPD  350 (691)
T ss_pred             HHHHHHHHHHHHHhhhhhhccCccccccceEEEEHHHHHHhcCCccccccCCCCCCcccHHHHHHHHHHHCCCEEEEcCc
Confidence            000000000              01235556788887765421     1111 122357899999999999988776555

>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation

Probab=83.44  E-value=21  Score=28.54  Aligned_cols=161  Identities=12%  Similarity=-0.009  Sum_probs=86.7

Q ss_pred             cEEEEEEeecCchHHHHHHHHHhhhCCCEEEcCCccccCCchhHHHHHHHHHHHhccceeEEEEecCceeeehHHHHHHH
Q psy10879         51 QVKYLFSIGNKENVVDVKLKEEIRRYDDILLLNQVPDEYSSLSQKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHEL  130 (245)
Q Consensus        51 ~~~~~Fv~g~~~~~~~~~l~~E~~~~~Dii~~~d~~d~y~~l~~K~~~~l~w~~~~~~~~~~~k~DDD~~v~~~~L~~~L  130 (245)
                      ..+++.+-+.+.+...+.+++..++++..+++-....+ .+   + -.++....+.+..+|++.+|.|....++.+..++
T Consensus        30 ~~eiivvdd~S~D~t~~~~~~~~~~~~~~i~~i~~~~n-~G---~-~~a~~~g~~~a~gd~i~~ld~D~~~~~~~l~~l~  104 (211)
T cd04188          30 SYEIIVVDDGSKDGTAEVARKLARKNPALIRVLTLPKN-RG---K-GGAVRAGMLAARGDYILFADADLATPFEELEKLE  104 (211)
T ss_pred             CEEEEEEeCCCCCchHHHHHHHHHhCCCcEEEEEcccC-CC---c-HHHHHHHHHHhcCCEEEEEeCCCCCCHHHHHHHH
Confidence            35666665555444444455555666654211011111 11   1 2333344455567999999999999999998888


Q ss_pred             hh-cCcCCcccEEEEecCCCeee-cCCCCc---ccC----cccCCCCCCc--cCCCeeeecHHHHHHHHHhcccCCCCCC
Q psy10879        131 EN-KFHYEKKLYWGFFDGRARVR-RAGKWK---EKN----WFLCDRYLPY--ALGGGYVLSHLLVKFISENSHMLSSYIS  199 (245)
Q Consensus       131 ~~-~~~~~~~~y~G~~~~~~~~~-r~~k~~---~~~----~~~~~~yp~y--~~G~gyvlS~~~~~~l~~~~~~~~~~~~  199 (245)
                      .. .... ..+.+|......... ....|.   .+.    +...-.-+++  +..+..++++.+++.+..... .. ...
T Consensus       105 ~~~~~~~-~~~v~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~g~~~~~r~~~~~~~~~~~-~~-~~~  181 (211)
T cd04188         105 EALKTSG-YDIAIGSRAHLASAAVVKRSWLRNLLGRGFNFLVRLLLGLGIKDTQCGFKLFTRDAARRLFPRLH-LE-RWA  181 (211)
T ss_pred             HHHhccC-CcEEEEEeeccCCcccccccHHHHHHHHHHHHHHHHHcCCCCcccccCceeEcHHHHHHHHhhhh-cc-ceE
Confidence            87 3333 567778654221100 000111   000    0000001112  234668999999999874432 22 234


Q ss_pred             ChhHHHHHHHhCCCeEeecC
Q psy10879        200 EDVSVGVWLSALDITRYHDV  219 (245)
Q Consensus       200 eDv~iG~~l~~~~v~~~~~~  219 (245)
                      +|..+-.-+.+.|....+.|
T Consensus       182 ~d~el~~r~~~~g~~~~~vp  201 (211)
T cd04188         182 FDVELLVLARRLGYPIEEVP  201 (211)
T ss_pred             eeHHHHHHHHHcCCeEEEcC
Confidence            58877777777888777666

UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.

>PF02485 Branch: Core-2/I-Branching enzyme; InterPro: IPR003406 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=82.44  E-value=16  Score=30.45  Aligned_cols=213  Identities=15%  Similarity=0.203  Sum_probs=96.7

Q ss_pred             EEEeCCCCCHHH-HHHHHHHHcCCcCCCcEEEEEEeecCc-hHHHHHHHHHhhhCCCEEEcCCccc---cCCchhHHHHH
Q psy10879         24 ILILTSSKNYIR-RKNIRDTWIKNIEKYQVKYLFSIGNKE-NVVDVKLKEEIRRYDDILLLNQVPD---EYSSLSQKVLH   98 (245)
Q Consensus        24 i~V~S~~~~~~~-R~~IR~TW~~~~~~~~~~~~Fv~g~~~-~~~~~~l~~E~~~~~Dii~~~d~~d---~y~~l~~K~~~   98 (245)
                      .+|+....+.+. +..++.....+.     .+.+.+.... ....+.+..-...++.+..+++-.+   +-.++..=++.
T Consensus         3 ylil~h~~~~~~~~~l~~~l~~~~~-----~f~iHiD~k~~~~~~~~~~~~~~~~~nv~~v~~r~~v~WG~~S~v~A~l~   77 (244)
T PF02485_consen    3 YLILAHKNDPEQLERLLRLLYHPDN-----DFYIHIDKKSPDYFYEEIKKLISCFPNVHFVPKRVDVRWGGFSLVEATLN   77 (244)
T ss_dssp             EEEEESS--HHHHHHHHHHH--TTS-----EEEEEE-TTS-HHHHHHHHHHHCT-TTEEE-SS-----TTSHHHHHHHHH
T ss_pred             EEEEecCCCHHHHHHHHHHhcCCCC-----EEEEEEcCCCChHHHHHHHHhcccCCceeecccccccccCCccHHHHHHH
Confidence            344443333333 346666664444     4555566653 3344445554677788765652222   23456677888


Q ss_pred             HHHHHHhc-cceeEEEEecCceeee--hHHHHHHHhhcCcCCcccEEEEecCCCeeecCCCCcccCcccC----CCCCCc
Q psy10879         99 SFKYIYEH-FDFQYLLKCDDDTFVR--VPNIIHELENKFHYEKKLYWGFFDGRARVRRAGKWKEKNWFLC----DRYLPY  171 (245)
Q Consensus        99 ~l~w~~~~-~~~~~~~k~DDD~~v~--~~~L~~~L~~~~~~~~~~y~G~~~~~~~~~r~~k~~~~~~~~~----~~yp~y  171 (245)
                      .++.+.+. .+.+|++.+-.+-|.-  .+.+.++|+..... ...+-+....... .+ .+|........    ..-..|
T Consensus        78 ll~~al~~~~~~~y~~llSg~D~Pl~s~~~i~~~l~~~~~~-~~f~~~~~~~~~~-~~-~r~~~~~~~~~~~~~~~~~~~  154 (244)
T PF02485_consen   78 LLREALKRDGDWDYFILLSGQDYPLKSNEEIHEFLESNNGD-NNFIESFSDEDPR-ES-GRYNPRIYDPFRPFFRKRTLY  154 (244)
T ss_dssp             HHHHHHHH-S---EEEEEETTEEESS-HHHHHHHHHHTTT---B---BEE--GGG-G--HHHHEEEETTEEEEEEEE--E
T ss_pred             HHHHHHhcCCCCcEEEEcccccccccchHHHHHHHHhcCCC-Ccceecccccccc-hh-hcceeeeeeeccccccccccc
Confidence            89999885 4899988888777764  47788888777432 2222222111110 00 11111100000    000225


Q ss_pred             cCCCeeeecHHHHHHHHHhcc-------cC-CCCCCChhHHHHHHHhCCCe-E---eecCCcccccCCCCccCCeEEEec
Q psy10879        172 ALGGGYVLSHLLVKFISENSH-------ML-SSYISEDVSVGVWLSALDIT-R---YHDVRFDTEFQSRGCNNSYLIVHK  239 (245)
Q Consensus       172 ~~G~gyvlS~~~~~~l~~~~~-------~~-~~~~~eDv~iG~~l~~~~v~-~---~~~~~f~~~~~~~~c~~~~~~~h~  239 (245)
                      -|..-+.||+++++-|+....       .+ .....|..++.-++...+-. .   .+.-++..+.+..+|..+.+....
T Consensus       155 ~GSqW~~Ltr~~v~~il~~~~~~~~~~~~~~~~~~pDE~ffqTll~n~~~~~~~~~~~~~r~i~W~~~~~~~p~~~~~~~  234 (244)
T PF02485_consen  155 KGSQWFSLTRDFVEYILDDPNYRPKLKKYFRFSLCPDESFFQTLLNNSGHFKDTIVNRNLRYIDWSRRGGCHPKTLTICD  234 (244)
T ss_dssp             EE-S--EEEHHHHHHHHH-HHHHHHHHHHT-TSSSGGGTHHHHH--SSGGG-B-TTTSSSEEE-BTGT-SS---SSEEEE
T ss_pred             ccceeeEeeHHHHHHhhhhHHHHHHHHHhhcCccCcchhhHHHhhcccchhcccccCCCEEEEECCCCCCCCCCeeeeee
Confidence            566669999999999885432       12 23467888887665543211 1   112344443335666666666776


Q ss_pred             cCCCC
Q psy10879        240 QNMHQ  244 (245)
Q Consensus       240 ~~p~~  244 (245)
                      +++.+
T Consensus       235 ~~~~d  239 (244)
T PF02485_consen  235 LGPED  239 (244)
T ss_dssp             --GGG
T ss_pred             eCHHH
Confidence            66654

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This is the glycosyltransferase family 14 GT14 from CAZY, a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme (2.4.1.150 from EC) and core-2 branching enzyme (2.4.1.102 from EC). I-branching enzyme, an integral membrane protein, converts linear into branched poly-N-acetyllactosaminoglycans in the glycosylation pathway, and is responsible for the production of the blood group I-antigen during embryonic development []. Core-2 branching enzyme, also an integral membrane protein, forms crucial side-chain branches in O-glycans in the glycosylation pathway [].; GO: 0008375 acetylglucosaminyltransferase activity, 0016020 membrane; PDB: 3OTK_D 2GAM_A 2GAK_B.

>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex

Probab=82.30  E-value=25  Score=28.57  Aligned_cols=114  Identities=7%  Similarity=-0.128  Sum_probs=62.8

Q ss_pred             HHHHHHhccceeEEEEecCceeeehHHHHHHHhhcCcCCcccEEEEecCCCeeecCCCCcc-----c-C-cc--------
Q psy10879         99 SFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGFFDGRARVRRAGKWKE-----K-N-WF--------  163 (245)
Q Consensus        99 ~l~w~~~~~~~~~~~k~DDD~~v~~~~L~~~L~~~~~~~~~~y~G~~~~~~~~~r~~k~~~-----~-~-~~--------  163 (245)
                      ++....+..+.+|++.+|.|+.+..+.|...+.....+.-....|.+...   .....|..     . . .+        
T Consensus        78 a~n~g~~~a~~~~i~~~DaD~~~~~~~l~~~~~~~~~~~v~~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (232)
T cd06437          78 ALAEGMKVAKGEYVAIFDADFVPPPDFLQKTPPYFADPKLGFVQTRWGHI---NANYSLLTRVQAMSLDYHFTIEQVARS  154 (232)
T ss_pred             HHHHHHHhCCCCEEEEEcCCCCCChHHHHHhhhhhcCCCeEEEecceeeE---cCCCchhhHhhhhhHHhhhhHhHhhHh
Confidence            34555566689999999999999998888855444332112233322110   01111110     0 0 00        


Q ss_pred             cCCCCCCccCCCeeeecHHHHHHHHHhcccCCCCCCChhHHHHHHHhCCCeEeecC
Q psy10879        164 LCDRYLPYALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRYHDV  219 (245)
Q Consensus       164 ~~~~yp~y~~G~gyvlS~~~~~~l~~~~~~~~~~~~eDv~iG~~l~~~~v~~~~~~  219 (245)
                      ....+ ..+.|++-++.+++++.+--..   .....||+.++.-+...|.+....+
T Consensus       155 ~~~~~-~~~~g~~~~~rr~~~~~vgg~~---~~~~~ED~~l~~rl~~~G~~~~~~~  206 (232)
T cd06437         155 STGLF-FNFNGTAGVWRKECIEDAGGWN---HDTLTEDLDLSYRAQLKGWKFVYLD  206 (232)
T ss_pred             hcCCe-EEeccchhhhhHHHHHHhCCCC---CCcchhhHHHHHHHHHCCCeEEEec
Confidence            01111 1134556678888887763222   1235799999988888887665544

Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	245
2j0a_A	280	Beta-1,3-N-acetylglucosaminyltransferase manic FR;	2e-14

>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A* Length = 280

 Score = 70.2 bits (171), Expect = 2e-14
 Identities = 34/198 (17%), Positives = 72/198 (36%), Gaps = 19/198 (9%)

Query: 22  IVILILTSSKNYIRRKN-IRDTWIKNIEKYQVKYLFSIGNKENVVDVKLKEEIRRYDDIL 80
           I I + T+   +  R + + DTW+  I +    ++F+    E + +      +       
Sbjct: 15  IFIAVKTTWAFHRSRLDLLLDTWVSRIRQQT--FIFTDSPDERLQERLGPHLVVTQCS-- 70

Query: 81  LLNQVPDEYSSLSQKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHYEKKL 140
                   + +LS K+   F         ++    DDD +V    ++  L+  F  ++ +
Sbjct: 71  ----AEHSHPALSCKMAAEFDAFLVS-GLRWFCHVDDDNYVNPKALLQLLK-TFPQDRDV 124

Query: 141 YWGFFDGRARVRRAGKWKEKNWFLCDRYLPYALGGGYVLSHLLVKFISE---NSHMLSS- 196
           Y G      R   A + + K      R+     G G+ ++  L   +      SH + + 
Sbjct: 125 YVG-KPSLNRPIHASELQSKQRTKLVRFWFATGGAGFCINRQLALKMVPWASGSHFVDTS 183

Query: 197 ---YISEDVSVGVWLSAL 211
               + +D +VG  +   
Sbjct: 184 ALIRLPDDCTVGYIIECK 201

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	245
2j0a_A	280	Beta-1,3-N-acetylglucosaminyltransferase manic FR;	99.96
1xhb_A	472	Polypeptide N-acetylgalactosaminyltransferase 1; g	96.47
1qg8_A	255	Protein (spore coat polysaccharide biosynthesis P	96.11
2d7i_A	570	Polypeptide N-acetylgalactosaminyltransferase 10;	95.81
4fix_A	657	UDP-galactofuranosyl transferase GLFT2; CAZY GT-2	95.65
2ffu_A	501	Ppgalnact-2, polypeptide N-acetylgalactosaminyltra	95.52
3bcv_A	240	Putative glycosyltransferase protein; protein stru	94.98
2z86_A	625	Chondroitin synthase; GT-A, glycosyltransferase A,	94.55
4hg6_A	802	Cellulose synthase subunit A; membrane translocati	94.22
2z86_A	625	Chondroitin synthase; GT-A, glycosyltransferase A,	92.62
2c0n_A	203	A197; thermophil protein, thermophilic virus, STIV	88.34

>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*

Probab=99.96  E-value=2.1e-29  Score=216.06  Aligned_cols=205  Identities=16%  Similarity=0.174  Sum_probs=137.2

Q ss_pred             CeeEEEEEeCCCCCHH-HHHHHHHHHcCCcCCCcEEEEEEeecCchHHHHHHHHHhhhCCCEEEcCCcc--ccCCchhHH
Q psy10879         19 SYFIVILILTSSKNYI-RRKNIRDTWIKNIEKYQVKYLFSIGNKENVVDVKLKEEIRRYDDILLLNQVP--DEYSSLSQK   95 (245)
Q Consensus        19 ~~~lli~V~S~~~~~~-~R~~IR~TW~~~~~~~~~~~~Fv~g~~~~~~~~~l~~E~~~~~Dii~~~d~~--d~y~~l~~K   95 (245)
                      .-+|+|+|+|+++++. |+.+||+||++.++.   ..+|+++...+...    ..  ..++++ ..++.  .++.+++.|
T Consensus        12 ~~~I~~~V~T~~~~~~~R~~~I~~TW~~~~~~---~~fifsd~~d~~l~----~~--~~~~~~-~~~~~~~~~~~~l~~K   81 (280)
T 2j0a_A           12 LGDIFIAVKTTWAFHRSRLDLLLDTWVSRIRQ---QTFIFTDSPDERLQ----ER--LGPHLV-VTQCSAEHSHPALSCK   81 (280)
T ss_dssp             GGGEEEEEECCGGGTTTTHHHHHHTGGGGSGG---GEEEEESSCCHHHH----HH--HGGGEE-ECCC-------CCCHH
T ss_pred             cccEEEEEECcHHHHHHHHHHHHHHHhccCCC---ceEEEcCCCccccc----cc--ccccce-eccccccccccchHHH
Confidence            4689999999998665 556999999998731   22334433322222    11  245676 34443  467888999


Q ss_pred             HHHHHHHHHhcc-ceeEEEEecCceeeehHHHHHHHhhcCcCCcccEEEEecCCCeeecCCCCcccC-cccCCCCCCccC
Q psy10879         96 VLHSFKYIYEHF-DFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGFFDGRARVRRAGKWKEKN-WFLCDRYLPYAL  173 (245)
Q Consensus        96 ~~~~l~w~~~~~-~~~~~~k~DDD~~v~~~~L~~~L~~~~~~~~~~y~G~~~~~~~~~r~~k~~~~~-~~~~~~yp~y~~  173 (245)
                      +...+.+..  . +++||+|+||||||++++|.++|...+++ +++|+|++... .|.|. +++.+. .+....|+.++|
T Consensus        82 ~~~~~~~~l--~~~~~Wf~~~DDDtyv~~~nL~~~L~~~d~~-~~~YiG~~~~~-~~~~~-~~~~~~~~~~~~~~~y~~G  156 (280)
T 2j0a_A           82 MAAEFDAFL--VSGLRWFCHVDDDNYVNPKALLQLLKTFPQD-RDVYVGKPSLN-RPIHA-SELQSKQRTKLVRFWFATG  156 (280)
T ss_dssp             HHHHHHHHH--HHTCSEEEEEETTEEECHHHHHHHHTTSCTT-SCCEEECEEC---------------------CCEECG
T ss_pred             HHHHHHHHh--CCCCcEEEEeCCCcEEcHHHHHHHHHhCCCC-CCEEEEEeccC-ccccc-cccCccccccccccCcccC
Confidence            998887542  3 89999999999999999999999999998 99999998744 34332 122221 111223433347


Q ss_pred             CCeeeecHHHHHHHHHhcccCC-------CCCCChhHHHHHHH-hCCCeEeecCCcccccCC----CCcc---CCeEEEe
Q psy10879        174 GGGYVLSHLLVKFISENSHMLS-------SYISEDVSVGVWLS-ALDITRYHDVRFDTEFQS----RGCN---NSYLIVH  238 (245)
Q Consensus       174 G~gyvlS~~~~~~l~~~~~~~~-------~~~~eDv~iG~~l~-~~~v~~~~~~~f~~~~~~----~~c~---~~~~~~h  238 (245)
                      |+||+||++++++|+.....++       ....||+++|+|+. ++||.+++.++||.+.+.    .++.   .-.+.+|
T Consensus       157 GaG~vlSr~~l~~l~~~~~~~~~~~~~~~~~~~dD~~lG~Cl~~~lGV~~~~~~~Fh~~~~~~~~~~~~~l~~~~~~s~~  236 (280)
T 2j0a_A          157 GAGFCINRQLALKMVPWASGSHFVDTSALIRLPDDCTVGYIIECKLGGRLQPSPLFHSHLETLQLLGAAQLPEQVTLSYG  236 (280)
T ss_dssp             GGCEEEEHHHHHHHHHHHTTCTTSCCTTTTTSCHHHHHHHHHHHTTCCCEEECTTCCCSSSCGGGCCTTTGGGCSEEECE
T ss_pred             CCEEEECHHHHHHHHHhhcccccccccccCCCCccHHHHHHHHhcCCCCceecccccCCCchhccCCHHHhccCcceecc
Confidence            8999999999999998765442       23468999999999 999999999999976652    3444   3456666

>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17

Probab=96.47  E-value=0.11  Score=46.45  Aligned_cols=192  Identities=9%  Similarity=0.068  Sum_probs=102.9

Q ss_pred             CeeEEEEEeCCCCC-HHHHHHHHHHHcCCcCCCcEEEEEEeecCc-hHHHHHHHHHhhhCC-CEEEcCCccccCCchhHH
Q psy10879         19 SYFIVILILTSSKN-YIRRKNIRDTWIKNIEKYQVKYLFSIGNKE-NVVDVKLKEEIRRYD-DILLLNQVPDEYSSLSQK   95 (245)
Q Consensus        19 ~~~lli~V~S~~~~-~~~R~~IR~TW~~~~~~~~~~~~Fv~g~~~-~~~~~~l~~E~~~~~-Dii~~~d~~d~y~~l~~K   95 (245)
                      .+.+-|+|++--+. ...+..|+.--.+.......+++.|-..+. +...+.+++-++.+. .+.++. ..+. .+    
T Consensus        28 ~p~vSVIIp~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~~~~~~v~vi~-~~~n-~G----  101 (472)
T 1xhb_A           28 LPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKKLKVPVHVIR-MEQR-SG----  101 (472)
T ss_dssp             CCCEEEEEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSSSSCEEEEE-CSSC-CC----
T ss_pred             CCCeEEEEEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHHHHCCCcEEEEE-CCCC-CC----
Confidence            35677777776554 333344433333222111235555544443 334555555556666 454432 1211 12    


Q ss_pred             HHHHHHHHHhccceeEEEEecCceeeehHHHHHHHhhcCcCCcccEEEEec---CCCe-------eecC-CCCccc-Ccc
Q psy10879         96 VLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGFFD---GRAR-------VRRA-GKWKEK-NWF  163 (245)
Q Consensus        96 ~~~~l~w~~~~~~~~~~~k~DDD~~v~~~~L~~~L~~~~~~~~~~y~G~~~---~~~~-------~~r~-~k~~~~-~~~  163 (245)
                      .-.+.....+....+|+++.|+|+.+..+-|..++.........+..|.+.   ....       ..+. -.|... .+.
T Consensus       102 ~~~a~N~g~~~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (472)
T 1xhb_A          102 LIRARLKGAAVSRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWY  181 (472)
T ss_dssp             HHHHHHHHHHHCCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEEE
T ss_pred             hHHHHHHHHHhccCCeEEEECCCeEeCccHHHHHHHHHHhCCCEEEEeeeeeEcCCCceeccCCCcccceeeccceeecc
Confidence            233444455566789999999999999988888887654331334444431   1100       0000 011100 000


Q ss_pred             c--------------CCCCCCccCCCeeeecHHHHHHHHHhcccCCCCCCChhHHHHHHHhCCCeEe
Q psy10879        164 L--------------CDRYLPYALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRY  216 (245)
Q Consensus       164 ~--------------~~~yp~y~~G~gyvlS~~~~~~l~~~~~~~~~~~~eDv~iG~~l~~~~v~~~  216 (245)
                      .              ....-+++.|+++++++++++.+-........+..||+-++.-+...|.+..
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~~~~~g~ED~dl~~R~~~~G~~i~  248 (472)
T 1xhb_A          182 PVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLE  248 (472)
T ss_dssp             ECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHHHHHTTSCCTTSCTTCCCCSHHHHHHHHTTCEEE
T ss_pred             cCCHHHHhcccCCCCCcccCccccceeEEEEHHHHHHcCCCCCcccccCchhHHHHHHHHhcCCeEE
Confidence            0              0112246789999999999998754333344445899999887887776544

>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*

Probab=96.11  E-value=0.25  Score=39.82  Aligned_cols=155  Identities=5%  Similarity=-0.075  Sum_probs=83.9

Q ss_pred             cEEEEEEeecCchHHHHHHHHHhhhCCCEEEcCCccccC-----CchhHHHHHHHHHHHhccceeEEEEecCceeeehHH
Q psy10879         51 QVKYLFSIGNKENVVDVKLKEEIRRYDDILLLNQVPDEY-----SSLSQKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPN  125 (245)
Q Consensus        51 ~~~~~Fv~g~~~~~~~~~l~~E~~~~~Dii~~~d~~d~y-----~~l~~K~~~~l~w~~~~~~~~~~~k~DDD~~v~~~~  125 (245)
                      .++++.+-..+.+... .+.++......|..+.. ...-     .|.  -.-.++....+.++.+|++..|+|.++..+.
T Consensus        30 ~~eiivvDd~S~d~t~-~~~~~~~~~~~i~~i~~-~~~~~~~~~~n~--G~~~a~N~gi~~a~g~~i~~lD~Dd~~~~~~  105 (255)
T 1qg8_A           30 DFELFIMDDNSNEETL-NVIRPFLNDNRVRFYQS-DISGVKERTEKT--RYAALINQAIEMAEGEYITYATDDNIYMPDR  105 (255)
T ss_dssp             CEEEEEEECSCCHHHH-HHHGGGGGSTTEEEEEC-CCCSHHHHHSSC--HHHHHHHHHHHHCCCSEEEEEETTEEECTTH
T ss_pred             ceEEEEEECCCCchHH-HHHHHHhhcCCEEEEec-cccccccccccc--CHHHHHHHHHHHcCCCEEEEeCCCCccChHH
Confidence            4566666555443333 33344433556654321 1000     121  2345566666777899999999999999888


Q ss_pred             HHHHHhhcC--cCCcccEEEEecC-----CCeeecCCCCcccCcccCCCCCCccCCCeeeecHHHHHHHH-Hhcc----c
Q psy10879        126 IIHELENKF--HYEKKLYWGFFDG-----RARVRRAGKWKEKNWFLCDRYLPYALGGGYVLSHLLVKFIS-ENSH----M  193 (245)
Q Consensus       126 L~~~L~~~~--~~~~~~y~G~~~~-----~~~~~r~~k~~~~~~~~~~~yp~y~~G~gyvlS~~~~~~l~-~~~~----~  193 (245)
                      |..++....  +. -.+..|....     ...+..  .+..+..........+..|++.++.+++++++- ....    .
T Consensus       106 l~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~  182 (255)
T 1qg8_A          106 LLKMVRELDTHPE-KAVIYSASKTYHLNENRDIVK--ETVRPAAQVTWNAPCAIDHCSVMHRYSVLEKVKEKFGSYWDES  182 (255)
T ss_dssp             HHHHHHHHHHCTT-CCEEEEEEEEEEEC---CEEE--EEEECCCSCBSCCTTTSCGGGEEEETHHHHHHHHHHSSSSCCC
T ss_pred             HHHHHHHHHhCCC-ceEEEeceEEEEeCCCCcchh--hccCchHHHHHhhcCCCccceEEEEHHHHHhhcccccccccCC
Confidence            888776653  22 4455555421     111110  000110000112233567899999999999876 3311    1


Q ss_pred             CCCCCCChhHHHHHHHhCC
Q psy10879        194 LSSYISEDVSVGVWLSALD  212 (245)
Q Consensus       194 ~~~~~~eDv~iG~~l~~~~  212 (245)
                      ......||..+..-+...|
T Consensus       183 ~~~~~~eD~~~~~r~~~~g  201 (255)
T 1qg8_A          183 PAFYRIGDARFFWRVNHFY  201 (255)
T ss_dssp             GGGSTTHHHHHHHHHTTTC
T ss_pred             cccchHHHHHHHHHHHHhC
Confidence            1234679998876665554

>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*

Probab=95.81  E-value=0.18  Score=46.60  Aligned_cols=191  Identities=9%  Similarity=-0.005  Sum_probs=100.1

Q ss_pred             eeEEEEEeCCCCC-HHHHHHHHHHHcCCcCCCcEEEEEEeecCc-hHHHHHHHHHhhhCCCEEEcCCccccCCchhHHHH
Q psy10879         20 YFIVILILTSSKN-YIRRKNIRDTWIKNIEKYQVKYLFSIGNKE-NVVDVKLKEEIRRYDDILLLNQVPDEYSSLSQKVL   97 (245)
Q Consensus        20 ~~lli~V~S~~~~-~~~R~~IR~TW~~~~~~~~~~~~Fv~g~~~-~~~~~~l~~E~~~~~Dii~~~d~~d~y~~l~~K~~   97 (245)
                      +.+-|+|++--.. ...+..|..--.+.......+++.|-..+. +++.+.+++.++.+..|.++.. ... .++    -
T Consensus       112 P~vSVIIp~yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~~~~v~vi~~-~~n-~G~----~  185 (570)
T 2d7i_A          112 PNTSIIIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMALFPSVRILRT-KKR-EGL----I  185 (570)
T ss_dssp             CCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHHTTSTTEEEEEC-SSC-CCH----H
T ss_pred             CCeEEEEEECCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHHHhCCeEEEEEC-CCC-CCH----H
Confidence            5677777776554 222333322221111111235555544444 3335556665666766654421 111 222    3


Q ss_pred             HHHHHHHhccceeEEEEecCceeeehHHHHHHHhhcCcCCcccEEE-Eec---CCCe---e-----ecC-CCCccc-C--
Q psy10879         98 HSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWG-FFD---GRAR---V-----RRA-GKWKEK-N--  161 (245)
Q Consensus        98 ~~l~w~~~~~~~~~~~k~DDD~~v~~~~L~~~L~~~~~~~~~~y~G-~~~---~~~~---~-----~r~-~k~~~~-~--  161 (245)
                      .+.....+..+.+|+++.|+|+.+..+-|..++...... ....+| .+.   ....   .     .+. -.|... .  
T Consensus       186 ~A~N~G~~~A~gd~i~fLD~D~~~~p~~L~~ll~~l~~~-~~~vv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (570)
T 2d7i_A          186 RTRMLGASVATGDVITFLDSHCEANVNWLPPLLDRIARN-RKTIVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMYYKRI  264 (570)
T ss_dssp             HHHHHHHHHCCSSEEEECCSSEEECTTCSHHHHHHHHHC-TTEEEEEEEEEECTTTCCEECCTTSSCEEEECTTCCEEEE
T ss_pred             HHHHHHHHhcCCCEEEEEcCCccccccHHHHHHHHHHhC-CCEEEeeeeeccCCCchhhccccCCccccccccccccccc
Confidence            334444455678999999999999888777777665443 333333 221   1100   0     000 011100 0  


Q ss_pred             ------ccc--C-CCCCCccCCCeeeecHHHHHHHHHhcccCCCCCCChhHHHHHHHhCCCeEee
Q psy10879        162 ------WFL--C-DRYLPYALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRYH  217 (245)
Q Consensus       162 ------~~~--~-~~yp~y~~G~gyvlS~~~~~~l~~~~~~~~~~~~eDv~iG~~l~~~~v~~~~  217 (245)
                            ...  . ..--+++.|+++++++++++.+-...........||+-++.-+...|.+...
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~  329 (570)
T 2d7i_A          265 PIPPELQKADPSDPFESPVMAGGLFAVDRKWFWELGGYDPGLEIWGGEQYEISFKVWMCGGRMED  329 (570)
T ss_dssp             CCCTTTCCSSTTSCEECSSCCSSSEEEEHHHHHHTTSSCTTCCSSSSHHHHHHHHHHHTTCEEEE
T ss_pred             ccchhhhccCCCcceecccccceEEEEEHHHHHhcCCCCCcccccCcchHHHHHHHHhCCCeEEE
Confidence                  000  0 0112457799999999999988544333444447999998888888866543

>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*

Probab=95.65  E-value=0.2  Score=47.20  Aligned_cols=194  Identities=10%  Similarity=-0.011  Sum_probs=99.1

Q ss_pred             CCCeeEEEEEeCCCCCHHHHHHHHHHHcCCcC-CCcEEEEEEeecCc--hHHHHHHHHHhh-hCCCEEEcCCccccCCch
Q psy10879         17 KHSYFIVILILTSSKNYIRRKNIRDTWIKNIE-KYQVKYLFSIGNKE--NVVDVKLKEEIR-RYDDILLLNQVPDEYSSL   92 (245)
Q Consensus        17 ~~~~~lli~V~S~~~~~~~R~~IR~TW~~~~~-~~~~~~~Fv~g~~~--~~~~~~l~~E~~-~~~Dii~~~d~~d~y~~l   92 (245)
                      +.++.|-|+|+|--....-++.|.. -.++.. .....-++|+...+  ++....+.+..+ ....|..+.  .++ ...
T Consensus       177 ~~~pkVSVVIptYN~~~~L~~~L~S-L~~qt~~~~~~~EIIVVDNgStD~s~~~~~~e~~~~~~~~I~vI~--~~N-~G~  252 (657)
T 4fix_A          177 PGTANIAVGIPTFNRPADCVNALRE-LTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAAARLGSRLSIHD--QPN-LGG  252 (657)
T ss_dssp             CSCCCEEEECCBSSCHHHHHHHHHH-HTTSHHHHTTEEEEEEEECSSSCGGGSTTHHHHHHHHGGGEEEEE--CCC-CHH
T ss_pred             CCCCeEEEEEEecCCHHHHHHHHHH-HHcCccccCCCCEEEEEECcCCCccchHHHHHHHHhcCCCEEEEE--CCC-CCH
Confidence            3456777777776433333444433 222210 01233466666554  222222222222 223454432  111 222


Q ss_pred             hHHHHHHHHHHHhccceeEEEEecCceeeehHHHHHHHhhcCcCCcccEEE-EecCCCee----------ecCCC-Cc-c
Q psy10879         93 SQKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWG-FFDGRARV----------RRAGK-WK-E  159 (245)
Q Consensus        93 ~~K~~~~l~w~~~~~~~~~~~k~DDD~~v~~~~L~~~L~~~~~~~~~~y~G-~~~~~~~~----------~r~~k-~~-~  159 (245)
                      +.-.=.+++.+....+++|++++|||+.+..+.|..++...........+| .+.....+          ...+. |. .
T Consensus       253 a~a~N~Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~il~~~~~~~~~~~g~~~~~~~~~~~~~  332 (657)
T 4fix_A          253 SGGYSRVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFMWTAA  332 (657)
T ss_dssp             HHHHHHHHHHHHHHCCCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEEEEETTSTTEECCSCEEEETTTTEEEEC
T ss_pred             HHHHHHHHHHHHhcCCCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeEEecCCCCceeeecccEecccccccccc
Confidence            222234555554444689999999999999988888876653321334444 44311110          00000 00 0


Q ss_pred             c--------------------CcccCCCCCCccCCCeeeecHHHHHHHHHhcccCCCCCCChhHHHHHHHhCCCeEe
Q psy10879        160 K--------------------NWFLCDRYLPYALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRY  216 (245)
Q Consensus       160 ~--------------------~~~~~~~yp~y~~G~gyvlS~~~~~~l~~~~~~~~~~~~eDv~iG~~l~~~~v~~~  216 (245)
                      +                    ..+.......|++|++.++.+++++.+---.  --....||+-++.=+...|.+.+
T Consensus       333 ~~~~~~~~f~~~~l~~~~~~~~~~~~~~~v~~~~g~~~lirr~v~~~vGgfd--~~F~~~ED~Dl~lR~~~~G~ki~  407 (657)
T 4fix_A          333 PHAEYDHDFAEYPLNDNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEELGQPL--PLFIKWDDADYGLRAAEHGYPTV  407 (657)
T ss_dssp             TTCCSCEETTTSCSSCSSHHHHGGGBCCCCSBCCTTEEEEEHHHHHHHCSCC--SCSSSSHHHHHHHHHHHTTCCEE
T ss_pred             ccccccccccccccccccccccccccceeccccchhHhHhhHHHHHHhCCCh--hHhccCcHHHHHHHHHHcCCeEE
Confidence            0                    0011112234788999999999999863222  12345799999988888886543

>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*

Probab=95.52  E-value=0.28  Score=44.27  Aligned_cols=189  Identities=10%  Similarity=0.043  Sum_probs=98.2

Q ss_pred             CeeEEEEEeCCCCCH-HHHHHHHHHHcCCcCCCcEEEEEEeecCc-hHHHHHHHHHhhhCCCEEEcCCccccCCchhHHH
Q psy10879         19 SYFIVILILTSSKNY-IRRKNIRDTWIKNIEKYQVKYLFSIGNKE-NVVDVKLKEEIRRYDDILLLNQVPDEYSSLSQKV   96 (245)
Q Consensus        19 ~~~lli~V~S~~~~~-~~R~~IR~TW~~~~~~~~~~~~Fv~g~~~-~~~~~~l~~E~~~~~Dii~~~d~~d~y~~l~~K~   96 (245)
                      .+.+-|+|++--... ..+..|..--.+.......++++|-..+. ++..    ...+.+..+.++. ..   .|.  -.
T Consensus        65 ~p~vSVIIp~yN~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~----~~~~~~~~v~vi~-~~---~n~--G~  134 (501)
T 2ffu_A           65 LPATSVVITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDG----ALLGKIEKVRVLR-ND---RRE--GL  134 (501)
T ss_dssp             CCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHH----HGGGGBTTEEEEE-CS---SCC--HH
T ss_pred             CCCEEEEEEeCcCcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHHH----HHHhcCCCEEEEE-CC---CCc--CH
Confidence            346666677655443 23333322221111111245565554444 3322    2234455665432 11   221  12


Q ss_pred             HHHHHHHHhccceeEEEEecCceeeehHHHHHHHhhcCcCCcccEEEEec---CCCee-------ecCC-CCccc-Cc--
Q psy10879         97 LHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGFFD---GRARV-------RRAG-KWKEK-NW--  162 (245)
Q Consensus        97 ~~~l~w~~~~~~~~~~~k~DDD~~v~~~~L~~~L~~~~~~~~~~y~G~~~---~~~~~-------~r~~-k~~~~-~~--  162 (245)
                      -.+.....+..+.+|++++|+|..+.++-|..++.........+..+.+.   .....       .+.+ .|... .+  
T Consensus       135 ~~A~N~G~~~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (501)
T 2ffu_A          135 MRSRVRGADAAQAKVLTFLDSHCECNEHWLEPLLERVAEDRTRVVSPIIDVINMDNFQYVGASADLKGGFDWNLVFKWDY  214 (501)
T ss_dssp             HHHHHHHHHHCCSSEEEECCSSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECTTTCCEECBCSSEEEEECTTCCEEEEE
T ss_pred             HHHHHHHHHhcCCCEEEEECCCcccCccHHHHHHHHHHhCCCeEEEeeeccCcCCCceeecCCcccceEeeecCCCcccc
Confidence            44555555666899999999999999988888887654431234433321   00000       0000 01100 00  


Q ss_pred             -----------cc-CCCCCCccCCCeeeecHHHHHHHHHhcccCCCCCCChhHHHHHHHhCCCeEee
Q psy10879        163 -----------FL-CDRYLPYALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRYH  217 (245)
Q Consensus       163 -----------~~-~~~yp~y~~G~gyvlS~~~~~~l~~~~~~~~~~~~eDv~iG~~l~~~~v~~~~  217 (245)
                                 .+ ....-+++.|+++++++++++.+-...........||+-+..-+...|.+...
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~  281 (501)
T 2ffu_A          215 MTPEQRRSRQGNPVAPIKTPMIAGGLFVMDKFYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEI  281 (501)
T ss_dssp             CCHHHHHHTSSCTTSCEECSSCCSSSEEEEHHHHHHTTCCCTTCCSSSSHHHHHHHHHHHTTCEEEE
T ss_pred             CCHHHHhhccCCCCCcccCccccceEEEEEHHHHHHhCCCCccccccCcchHHHHHHHHhcCCeEEE
Confidence                       00 01112467899999999999988644333444458999998777777765443

>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}

Probab=94.98  E-value=0.31  Score=38.75  Aligned_cols=189  Identities=8%  Similarity=0.002  Sum_probs=92.3

Q ss_pred             eEEEEEeCCCCCHHHHHHHHHHHcCCcCCCcEEEEEEeecCchHHHHHHHHHhhhCCCEEEcCCccccCCchhHHHHHHH
Q psy10879         21 FIVILILTSSKNYIRRKNIRDTWIKNIEKYQVKYLFSIGNKENVVDVKLKEEIRRYDDILLLNQVPDEYSSLSQKVLHSF  100 (245)
Q Consensus        21 ~lli~V~S~~~~~~~R~~IR~TW~~~~~~~~~~~~Fv~g~~~~~~~~~l~~E~~~~~Dii~~~d~~d~y~~l~~K~~~~l  100 (245)
                      .+-|+|++--....-++.|+.--.+..  ..++++.+-..+.+...+.+++-++++..+..+.  .+   |.  -.-.+.
T Consensus         6 ~vsViIp~yn~~~~l~~~l~Sl~~q~~--~~~eiIvvDd~S~d~t~~~~~~~~~~~~~i~~i~--~~---n~--G~~~a~   76 (240)
T 3bcv_A            6 KVSVIVPIYNVEKYLDQCVQALLAQTL--SDIEIILIDDESPDNCPKICDDYAAQYPNIKVIH--KK---NA--GLGMAC   76 (240)
T ss_dssp             SEEEEEEESSCTTTHHHHHHHHHTCSS--SSEEEEEEECCCSSSHHHHHHHHHHHCSSEEEEE--CC---CC--CHHHHH
T ss_pred             cEEEEEecCCCHHHHHHHHHHHHhCcC--CCeEEEEEECCCCcCHHHHHHHHHhhCCCEEEEE--CC---CC--ChHHHH
Confidence            455555554322223334433333222  2456666654444333444444455666766442  11   21  123445


Q ss_pred             HHHHhccceeEEEEecCceeeehHHHHHHHhhcCcCCcccEEEEec---CCCeee-cCC------CCccc----Cccc--
Q psy10879        101 KYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGFFD---GRARVR-RAG------KWKEK----NWFL--  164 (245)
Q Consensus       101 ~w~~~~~~~~~~~k~DDD~~v~~~~L~~~L~~~~~~~~~~y~G~~~---~~~~~~-r~~------k~~~~----~~~~--  164 (245)
                      ....+.++.+|++++|+|.++..+.|..++.........+.+|...   ....+. .-.      .++..    +...  
T Consensus        77 N~g~~~a~g~~i~~lD~Dd~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (240)
T 3bcv_A           77 NSGLDVATGEYVAFCDSDDYVDSDMYMTMYNVAQKYTCDAVFTGLKRITMAGIPTGTVTHQKEFKLYKNKNEIHTLLKDL  156 (240)
T ss_dssp             HHHHHHCCSSEEEECCTTCCCCTTHHHHHHHHHHHHTCSEEEC--------------------CEEECSHHHHHHHHGGG
T ss_pred             HHHHHHcCCCEEEEECCCCcCCHHHHHHHHHHHHhcCCCEEEEeeEEEccCCccccccccccccccccCHHHHHHHHHHH
Confidence            5555667889999999999999888887776654311344444321   111100 000      00000    0000  


Q ss_pred             CCCCC------Cc-cCCCeeeecHHHHHHHHHhcccCCCCCCChhHHHHHHHhCCCeEeec
Q psy10879        165 CDRYL------PY-ALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRYHD  218 (245)
Q Consensus       165 ~~~yp------~y-~~G~gyvlS~~~~~~l~~~~~~~~~~~~eDv~iG~~l~~~~v~~~~~  218 (245)
                      ...-|      .+ ..|++.++.+++++++--..........||..++.-+...|.+....
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~eD~~~~~r~~~~g~~i~~~  217 (240)
T 3bcv_A          157 IASDPYAREERAIQVSAKVVLYRRNLIEKKHLRFVSERILPSEDLIFNVDVLANSNIVCVL  217 (240)
T ss_dssp             TSSCHHHHHHHHHHHTCSCEEEEHHHHHHTTCCCCCTTTCTTHHHHHHHHHHTTCSCEEEC
T ss_pred             hhcchhhccccccccchhheeeeHHHHHHcCCccCCCCCccCCCHHHHHHHHHhCCEEEEE
Confidence            00000      01 34788999999998852111111123469999987777666554443

>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*

Probab=94.55  E-value=0.56  Score=43.41  Aligned_cols=193  Identities=10%  Similarity=0.041  Sum_probs=97.3

Q ss_pred             eeEEEEEeCCCCCHHHHHHHHHHHcCCcCCCcEEEEEEeecCchHHHHHHHHHhhhCCCEEEcCCccccCCchhHHHHHH
Q psy10879         20 YFIVILILTSSKNYIRRKNIRDTWIKNIEKYQVKYLFSIGNKENVVDVKLKEEIRRYDDILLLNQVPDEYSSLSQKVLHS   99 (245)
Q Consensus        20 ~~lli~V~S~~~~~~~R~~IR~TW~~~~~~~~~~~~Fv~g~~~~~~~~~l~~E~~~~~Dii~~~d~~d~y~~l~~K~~~~   99 (245)
                      +.|-|+|++--.....+..++.--.+.. ....+++.+-..+.+...+ +.++......+..+. ..+  .+  .-.-.+
T Consensus        93 p~vsviIp~~n~~~~l~~~l~sl~~q~~-~~~~eiivvDd~s~d~t~~-~~~~~~~~~~i~~i~-~~~--~~--~g~~~a  165 (625)
T 2z86_A           93 DGLSIVIPTYNRAKILAITLACLCNQKT-IYDYEVIVADDGSKENIEE-IVREFESLLNIKYVR-QKD--YG--YQLCAV  165 (625)
T ss_dssp             CCEEEEEEESSCHHHHHHHHHHHHTCCC-SSCEEEEEEEESCSSCHHH-HHHTTTTTSCEEEEE-ECC--CS--CCHHHH
T ss_pred             CcEEEEEecCCcHHHHHHHHHHHHhhcc-CCCeEEEEEeCCCchhHHH-HHHHhhhcCCeEEEE-eCC--CC--cchhHH
Confidence            4566777765432222334433322222 2245666665444432222 222322223444332 111  11  012234


Q ss_pred             HHHHHhccceeEEEEecCceeeehHHHHHHHhhcCcCCcccEEEEec--CCCee--e-----------------------
Q psy10879        100 FKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGFFD--GRARV--R-----------------------  152 (245)
Q Consensus       100 l~w~~~~~~~~~~~k~DDD~~v~~~~L~~~L~~~~~~~~~~y~G~~~--~~~~~--~-----------------------  152 (245)
                      +....+..+.+|++..|+|..+..+.|..++...........+|...  .....  .                       
T Consensus       166 ~N~g~~~a~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (625)
T 2z86_A          166 RNLGLRAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNNQVAG  245 (625)
T ss_dssp             HHHHHHHCCSSEEEEECTTEEECTTHHHHHHHHHHHCTTEEEECCEEEECCTTCCHHHHHHSTTGGGTSCC---------
T ss_pred             HHHHHHhCCcCEEEEECCCCCCCHHHHHHHHHHHhcCCceEEEEeeeeccCcccchhhcccchHHhhhcchhccCCchhh
Confidence            44455566889999999999999888888877654321334444321  00000  0                       


Q ss_pred             -----cCCCCcccCc-----ccC-CCCCCccCCCeeeecHHHHHHHHHhcccCCCCCCChhHHHHHHHhCCCeEeecC
Q psy10879        153 -----RAGKWKEKNW-----FLC-DRYLPYALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRYHDV  219 (245)
Q Consensus       153 -----r~~k~~~~~~-----~~~-~~yp~y~~G~gyvlS~~~~~~l~~~~~~~~~~~~eDv~iG~~l~~~~v~~~~~~  219 (245)
                           ....|.....     ... ..-..++.|++.++++++++.+--.......+..||..++.=+...|......+
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~l~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~~p  323 (625)
T 2z86_A          246 KVEQNKSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREGCYFRSVE  323 (625)
T ss_dssp             ------CCCTHHHHHHHTTTTTTCSCGGGGCCTTEEEEETHHHHHHCCCCTTCSSCCCHHHHHHHHHHHTTCEEEECG
T ss_pred             hhccCCccccchhhhcccccccccCCceeEEeeceeeeEHHHHHHhCCCccccccCCcchhhhhhhHHhCCceEEEcc
Confidence                 0000110000     000 011124789999999999998743222333334799999988888887655443

>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}

Probab=94.22  E-value=2.3  Score=40.88  Aligned_cols=191  Identities=9%  Similarity=-0.053  Sum_probs=99.5

Q ss_pred             CCeeEEEEEeCCCCCHHH-HHHHHHHHcCCcCCCcEEEEEEeecCc-hHH--------------HHHHHHHhhhCCCEEE
Q psy10879         18 HSYFIVILILTSSKNYIR-RKNIRDTWIKNIEKYQVKYLFSIGNKE-NVV--------------DVKLKEEIRRYDDILL   81 (245)
Q Consensus        18 ~~~~lli~V~S~~~~~~~-R~~IR~TW~~~~~~~~~~~~Fv~g~~~-~~~--------------~~~l~~E~~~~~Dii~   81 (245)
                      +.+.+-|+|++--+...- ++.|+.--...-++.+.+++.+-..+. ++.              ...+++-.+.++-.+ 
T Consensus       138 ~~P~VSViIPtyNe~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~~~~~v~~-  216 (802)
T 4hg6_A          138 ELPTVDILVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLCRELGVVY-  216 (802)
T ss_dssp             TCCCEEEEEECTTCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHTCEE-
T ss_pred             CCCcEEEEEEECCCCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHHHhcCcEE-
Confidence            346788888887655444 444444333222122244444433332 221              122332234444333 


Q ss_pred             cCCccccCCchhHHHHHHHHHHHhccceeEEEEecCceeeehHHHHHHHhhcC--cCCcccEEEEecC-CCee-ecC-CC
Q psy10879         82 LNQVPDEYSSLSQKVLHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKF--HYEKKLYWGFFDG-RARV-RRA-GK  156 (245)
Q Consensus        82 ~~d~~d~y~~l~~K~~~~l~w~~~~~~~~~~~k~DDD~~v~~~~L~~~L~~~~--~~~~~~y~G~~~~-~~~~-~r~-~k  156 (245)
                      +. -.+   |...|. ..+....+.++.+|++.+|+|+.+..+.|.+.+....  +. -....|.... +..+ .++ +.
T Consensus       217 i~-~~~---~~~GKa-~alN~gl~~a~gd~Il~lDaD~~~~pd~L~~lv~~~~~dp~-v~~V~~~~~~~~~~~~~~~~~~  290 (802)
T 4hg6_A          217 ST-RER---NEHAKA-GNMSAALERLKGELVVVFDADHVPSRDFLARTVGYFVEDPD-LFLVQTPHFFINPDPIQRNLAL  290 (802)
T ss_dssp             EE-CSS---CCSHHH-HHHHHHHHHCCCSEEEECCTTEEECTTHHHHHHHHHHHSSS-CCEEECCCCBSSCCHHHHHHTC
T ss_pred             EE-ecC---CCCcch-HHHHHHHHhcCCCEEEEECCCCCcChHHHHHHHHHHhcCCC-eEEEeccEEEeCCchHhhhhhH
Confidence            21 111   212333 3456666677899999999999999998888887763  32 2333333221 1111 010 11


Q ss_pred             Cc---cc-C-ccc-----CC-CCCCccCCCeeeecHHHHHHHHHhcccCCCCCCChhHHHHHHHhCCCeEeec
Q psy10879        157 WK---EK-N-WFL-----CD-RYLPYALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRYHD  218 (245)
Q Consensus       157 ~~---~~-~-~~~-----~~-~yp~y~~G~gyvlS~~~~~~l~~~~~~~~~~~~eDv~iG~~l~~~~v~~~~~  218 (245)
                      +.   .. + ++.     .+ .-.+++.|++.++.+++++.+-...   .....||..++.-+.+.|.+....
T Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~vGgf~---~~~~~ED~~l~~rl~~~G~ri~~~  360 (802)
T 4hg6_A          291 GDRCPPENEMFYGKIHRGLDRWGGAFFCGSAAVLRRRALDEAGGFA---GETITEDAETALEIHSRGWKSLYI  360 (802)
T ss_dssp             CTTSCCTTHHHHHTHHHHHHHTTCCCCCSSSEEEEHHHHHHHTTCC---CSSSSHHHHHHHHHHTTTCCEEEC
T ss_pred             HhhhhHHHHHHHHHHHhhHhhcCCceecccchhhhHHHHHHcCCcC---CCCcchHHHHHHHHHHcCCeEEEe
Confidence            10   00 0 010     00 0113467899999999999873222   222359999998888888765543

>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*

Probab=92.62  E-value=1.1  Score=41.27  Aligned_cols=184  Identities=9%  Similarity=-0.019  Sum_probs=92.7

Q ss_pred             eeEEEEEeCCCCCHHHHHHHHHHHcCCcCCCcEEEEEEeecCchHHHHHHHHHhhhCCCEEEcCCccccCCchhHHHHHH
Q psy10879         20 YFIVILILTSSKNYIRRKNIRDTWIKNIEKYQVKYLFSIGNKENVVDVKLKEEIRRYDDILLLNQVPDEYSSLSQKVLHS   99 (245)
Q Consensus        20 ~~lli~V~S~~~~~~~R~~IR~TW~~~~~~~~~~~~Fv~g~~~~~~~~~l~~E~~~~~Dii~~~d~~d~y~~l~~K~~~~   99 (245)
                      +.+-|+|.+--....-++.|..--.+..  ..++++.+-..+.+...+.+.+-.+.+..+..+.  .   .|.  -.-.+
T Consensus       375 ~~vsiii~~yn~~~~l~~~l~s~~~q~~--~~~eiivvdd~S~d~t~~~~~~~~~~~~~i~~~~--~---~n~--G~~~a  445 (625)
T 2z86_A          375 PLVSIYIPAYNCSKYIVRCVESALNQTI--TDLEVCICDDGSTDDTLRILQEHYANHPRVRFIS--Q---KNK--GIGSA  445 (625)
T ss_dssp             CSEEEEEEESSCTTTHHHHHHHHHSSSC--CSEEEEEEEESCSSSHHHHHHHHHTTCTTEEEEE--E---CCC--CHHHH
T ss_pred             CeEEEEEeCCCCHHHHHHHHHHHHhCcC--CCeEEEEEECcCChhHHHHHHHHHhhCCcEEEEe--C---CCC--CHHHH
Confidence            4555656554322223333333322221  2356666655444333344444445566665442  1   121  12344


Q ss_pred             HHHHHhccceeEEEEecCceeeehHHHHHHHhhcC--cCCcccEEEEec---CCCeeecCC-CCcccCcccCCCCCCccC
Q psy10879        100 FKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKF--HYEKKLYWGFFD---GRARVRRAG-KWKEKNWFLCDRYLPYAL  173 (245)
Q Consensus       100 l~w~~~~~~~~~~~k~DDD~~v~~~~L~~~L~~~~--~~~~~~y~G~~~---~~~~~~r~~-k~~~~~~~~~~~yp~y~~  173 (245)
                      +....+.++.+|++..|+|.++..+.|..++....  +. -.+..|...   ........+ .|.  .+........++.
T Consensus       446 ~n~g~~~a~g~~i~~ld~D~~~~~~~l~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~  522 (625)
T 2z86_A          446 SNTAVRLCRGFYIGQLDSDDFLEPDAVELCLDEFRKDLS-LACVYTTNRNIDREGNLISNGYNWP--IYSREKLTSAMIC  522 (625)
T ss_dssp             HHHHHHHCCSSEEEECCTTCEECTTHHHHHHHHHHHCTT-CSEEEEEEEEECTTSCEEEECCCCS--SCCHHHHTTSCCC
T ss_pred             HHHHHHhcCCCEEEEECCCcccChhHHHHHHHHHHhCCC-eeEEEeeeEEECCCCCEeccCcccc--cCCHHHHhhcccC
Confidence            55555666889999999999999988888876542  32 233334221   111111111 111  0000001112456


Q ss_pred             CCeeeecHHHHHHHHHhcccCCCCCCChhHHHHHHHhCCCeEeec
Q psy10879        174 GGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRYHD  218 (245)
Q Consensus       174 G~gyvlS~~~~~~l~~~~~~~~~~~~eDv~iG~~l~~~~v~~~~~  218 (245)
                      |++.++.+++++.+-....  .....||.-+..-+...| .....
T Consensus       523 ~~~~~~~r~~~~~~ggfd~--~~~~~eD~dl~~r~~~~g-~~~~~  564 (625)
T 2z86_A          523 HHFRMFTARAWNLTEGFNE--SISNAVDYDMYLKLSEVG-PFKHI  564 (625)
T ss_dssp             CSCEEEEHHHHTTTTCCCS--SCSSCHHHHHHHHHTTTS-CEEEE
T ss_pred             CceEEEEHHHHHHhCCCCC--ccCChHHHHHHHHHHHhC-CEEEe
Confidence            7788999988765432221  123569998876666667 44433

>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}

Probab=88.34  E-value=3.7  Score=32.47  Aligned_cols=105  Identities=15%  Similarity=0.042  Sum_probs=64.5

Q ss_pred             hccceeEEEEecCc---eeeehHHHHHHHhhcCcCCcccEEEEecCCCe--eecCCCCcccCcccCCCCCCccCCCeeee
Q psy10879        105 EHFDFQYLLKCDDD---TFVRVPNIIHELENKFHYEKKLYWGFFDGRAR--VRRAGKWKEKNWFLCDRYLPYALGGGYVL  179 (245)
Q Consensus       105 ~~~~~~~~~k~DDD---~~v~~~~L~~~L~~~~~~~~~~y~G~~~~~~~--~~r~~k~~~~~~~~~~~yp~y~~G~gyvl  179 (245)
                      ..-++++++.+|-|   .-.+++.+.++|..   . .++.+|.......  +......+.......  =-.+|++|..++
T Consensus        50 ~~~~~dhllfIDAD~~~I~FdPe~V~rLl~~---g-~DVV~GsYp~K~~~~~s~~a~~y~~~i~~~--~V~d~~tGF~lI  123 (203)
T 2c0n_A           50 EMKDYDTLAFLDEDVVPIEIDFQKVEAKFNE---G-YDVVCGYYYLKTLRGYSVYRKDWEKEIFDG--EVNGCGLGFTFI  123 (203)
T ss_dssp             HCTTCCEEEEECTTEEEEECCHHHHHHHHHH---T-CSEEEEECBCTTSSSBSEESSSBCSSCCCE--ECSEECSSEEEE
T ss_pred             hcCCCCEEEEEeCCCCccccCHHHHHHHHhC---C-CCEEEEEeeccCCCccchHHHHHHHhccCc--eeeeccccEEEE
Confidence            34478999999999   99999999999944   2 6788887543211  100011111110000  013789999999


Q ss_pred             cHHHHHHHHHhcc------cCCCCCCChhHHHHHHHhCCCeE
Q psy10879        180 SHLLVKFISENSH------MLSSYISEDVSVGVWLSALDITR  215 (245)
Q Consensus       180 S~~~~~~l~~~~~------~~~~~~~eDv~iG~~l~~~~v~~  215 (245)
                      +|.++++|....-      ..+..--||+++=..++..+-.+
T Consensus       124 kR~V~e~L~~p~fl~~~~~e~~~~~gEdv~F~~~~k~~~~~~  165 (203)
T 2c0n_A          124 KREFLEKIKRPAFLAFKPIESPHWIGEDVYFFSTHKPRTYAL  165 (203)
T ss_dssp             EHHHHTTSCSSCCCC---------CCHHHHHHHHHCCCEEEE
T ss_pred             hHHHHHHHhhhhhhcCChhhhccccCCceEEEeccccccccc
Confidence            9999999855432      12223358998877777655444

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	245
d1xhba2	328	Polypeptide N-acetylgalactosaminyltransferase 1, N	96.23
d1qg8a_	255	Spore coat polysaccharide biosynthesis protein Sps	92.69
d1omza_	265	Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-Ga	87.17

>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.23  E-value=0.024  Score=46.05  Aligned_cols=122  Identities=10%  Similarity=-0.043  Sum_probs=71.5

Q ss_pred             HHHHHHHhccceeEEEEecCceeeehHHHHHHHhhcCcCCcccEEEEec---CCC-------eeec---CC----CCc-c
Q psy10879         98 HSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHYEKKLYWGFFD---GRA-------RVRR---AG----KWK-E  159 (245)
Q Consensus        98 ~~l~w~~~~~~~~~~~k~DDD~~v~~~~L~~~L~~~~~~~~~~y~G~~~---~~~-------~~~r---~~----k~~-~  159 (245)
                      .+.....+.++.+|++++|+|+.+..+-|..++.........+..|.+.   ...       ...+   ..    .|. .
T Consensus        97 ~a~N~Gi~~a~gd~i~flD~D~~~~p~~l~~l~~~~~~~~~~~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (328)
T d1xhba2          97 RARLKGAAVSRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPV  176 (328)
T ss_dssp             HHHHHHHHHCCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEEEEC
T ss_pred             HHHHHHHHhhhcceeeecCcccccChhHHHHHHHHHhcCCCeEEecceeeeccCceeeccCCcccccccccccccccccc
Confidence            3455556667899999999999999888877776544331233333321   100       0000   00    000 0


Q ss_pred             c----Cccc----CCCCCCccCCCeeeecHHHHHHHHHhcccCCCCCCChhHHHHHHHhCCCeEeecC
Q psy10879        160 K----NWFL----CDRYLPYALGGGYVLSHLLVKFISENSHMLSSYISEDVSVGVWLSALDITRYHDV  219 (245)
Q Consensus       160 ~----~~~~----~~~yp~y~~G~gyvlS~~~~~~l~~~~~~~~~~~~eDv~iG~~l~~~~v~~~~~~  219 (245)
                      +    ....    ....-+++.|+++++++++.+++-.-.........||.-++.-+.+.|......|
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~f~~vGgfDe~~~~~g~ED~Dl~~R~~~~G~~i~~~p  244 (328)
T d1xhba2         177 PQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVT  244 (328)
T ss_dssp             CHHHHHHTTTCTTSCEECSBCCSSSEEEEHHHHHHTTSCCTTSCTTCCCCSHHHHHHHHTTCEEEEEE
T ss_pred             chhhhhccccccccccccceecceeeeeeHHHHHHhCCCCCCCcCcCchHHHHHHHHHHhCCeEEEeC
Confidence            0    0000    1111246779999999999998754444344456799999888888887655443

>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Spore coat polysaccharide biosynthesis protein SpsA
domain: Spore coat polysaccharide biosynthesis protein SpsA
species: Bacillus subtilis [TaxId: 1423]

Probab=92.69  E-value=1.4  Score=33.32  Aligned_cols=107  Identities=7%  Similarity=-0.076  Sum_probs=59.2

Q ss_pred             HHHHHHHHhccceeEEEEecCceeeehHHHHHHHhhc--CcCCcccEEEEecC-----CCeeecCCCCcccCcccCCCCC
Q psy10879         97 LHSFKYIYEHFDFQYLLKCDDDTFVRVPNIIHELENK--FHYEKKLYWGFFDG-----RARVRRAGKWKEKNWFLCDRYL  169 (245)
Q Consensus        97 ~~~l~w~~~~~~~~~~~k~DDD~~v~~~~L~~~L~~~--~~~~~~~y~G~~~~-----~~~~~r~~k~~~~~~~~~~~yp  169 (245)
                      -.++....+.++.+|++.+|+|.++..+.|...+...  .++ ..++.|....     +......  ...+........+
T Consensus        77 ~~a~N~gi~~a~g~~i~~lD~Dd~~~p~~l~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~  153 (255)
T d1qg8a_          77 AALINQAIEMAEGEYITYATDDNIYMPDRLLKMVRELDTHPE-KAVIYSASKTYHLNENRDIVKE--TVRPAAQVTWNAP  153 (255)
T ss_dssp             HHHHHHHHHHCCCSEEEEEETTEEECTTHHHHHHHHHHHCTT-CCEEEEEEEEEEEC---CEEEE--EEECCCSCBSCCT
T ss_pred             cccccccccccccccccccccccccccchHHHHHHHHHhCCC-CCeEeecceeeeeCCCCcEeee--ecccchhhhhhhc
Confidence            3456666677789999999999999988777666553  233 4455443211     1000000  0000000011122


Q ss_pred             CccCCCeeeecHHHHHHHHHhccc-----CCCCCCChhHHHH
Q psy10879        170 PYALGGGYVLSHLLVKFISENSHM-----LSSYISEDVSVGV  206 (245)
Q Consensus       170 ~y~~G~gyvlS~~~~~~l~~~~~~-----~~~~~~eDv~iG~  206 (245)
                      ....+++.++++++++++......     ......||..+..
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~dl~l  195 (255)
T d1qg8a_         154 CAIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFW  195 (255)
T ss_dssp             TTSCGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHH
T ss_pred             ccccchhHHHHHHHHHHHHHhhCCCccccchhcchhhHHHHH
Confidence            235677789999999998765421     1223467876654

>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Exostosin
domain: Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=87.17  E-value=2  Score=31.26  Aligned_cols=35  Identities=14%  Similarity=0.372  Sum_probs=28.7

Q ss_pred             HHHhccceeEEEEecCceeeehHHHHHHHhhcCcC
Q psy10879        102 YIYEHFDFQYLLKCDDDTFVRVPNIIHELENKFHY  136 (245)
Q Consensus       102 w~~~~~~~~~~~k~DDD~~v~~~~L~~~L~~~~~~  136 (245)
                      ...+.++.+|++.+|||..+..+.|...++.....
T Consensus        75 ~~~~~a~ge~i~~lD~D~~~~~~~l~~l~~~~~~~  109 (265)
T d1omza_          75 QVFPEVETNAVLMVDDDTLISAQDLVFAFSIWQQF  109 (265)
T ss_dssp             SCCTTCCSSEEEEECTTEEECHHHHHHHHHHHTTS
T ss_pred             hhHHhCCcCEEEEeCcccCCCHHHHHHHHHHHHhC
Confidence            44455588999999999999999999888877654