Psyllid ID: psy10896

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300--
MKPQESLSELSRALCPKSLLYLQINIVWSDWFTAEALHIAHLMASHGYLFPIEEHVLTVKNDNTFYRFQTPYFWPSNCWEPENTDYAVYLCKRTMQNKTRLELADYEAENLALLQKMFSRKWEFIFMQAEAQSKVDKKRDKLERKVLDSQERAFWDVHRPMPGCINTTEVDMKKVDTKKNKTSSTIKTMKSDLSSTCVSHLEAIKKEITSLKIYINYYEQYCEYDPFFTPTELANPWLTDNPEFWDEEKQAKEISARRIKRWAFSLQELLKDPLGRDHFTKFLDKEFSGENLKFWEAVQEYT
ccccccccccccccccccHHHHHHHHccccccHHHHHHHHHHHHHccEEEEcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHcccccHHHHHHHHHHHHHHHccHHcHHHHHHHHHHHHccHHHHHHHHHHHcc
cccHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEccccEEEEcccccEEEEccccccccccccHccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHEHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccccccccccccccccccccccHEEcccccccccHHHHHHccccHHHHHccHHHHHHHHHHHHHccccHHHHHHHHHHHcc
MKPQESLSELSRALCPKSLLYLQINIVWSDWFTAEALHIAHLMAshgylfpieehvltvkndntfyrfqtpyfwpsncwepentDYAVYLCKRTMQNKTRLELADYEAENLALLQKMFSRKWEFIFMQAEAQSKVDKKRDKLERKVLDSQERafwdvhrpmpgcinttevdmkkvdtkknktsSTIKTMKSDLSSTCVSHLEAIKKEITSLKIYINYYEQyceydpfftptelanpwltdnpefwDEEKQAKEISARRIKRWAFSLQELlkdplgrdhftkfldkefsgenLKFWEAVQEYT
MKPQESLSELSRALCPKSLLYLQINIVWSDWFTAEALHIAHLMASHGYLFPIEEHVLTVKNDNTFYRFQTPyfwpsncwepENTDYAVYLCKRTMQNKTRLELADYEAENLALLQKMFSRKWEFIFMQAeaqskvdkkrdkLERKVLdsqerafwdvhrpmpgcinttevdmkkvdtkknktsstiktmksdlsstcVSHLEAIKKEITSLKIYINYYEQYCEYDPFFTPTELANPWLTDNPEFWDEEKQAKEISARRIKRWAFSLQEllkdplgrDHFTKFldkefsgenlkFWEAVQEYT
MKPQESLSELSRALCPKSLLYLQINIVWSDWFTAEALHIAHLMASHGYLFPIEEHVLTVKNDNTFYRFQTPYFWPSNCWEPENTDYAVYLCKRTMQNKTRLELADYEAENLALLQKMFSRKWEFIFMQAEAQSKVDKKRDKLERKVLDSQERAFWDVHRPMPGCINTTEVDMKKVDtkknktsstiktmksDLSSTCVSHLEAIKKEITSLKIYINYYEQYCEYDPFFTPTELANPWLTDNPEFWDEEKQAKEISARRIKRWAFSLQELLKDPLGRDHFTKFLDKEFSGENLKFWEAVQEYT
************ALCPKSLLYLQINIVWSDWFTAEALHIAHLMASHGYLFPIEEHVLTVKNDNTFYRFQTPYFWPSNCWEPENTDYAVYLCKRTMQNKTRLELADYEAENLALLQKMFSRKWEFIFMQA**********************RAFWDVHRPMPGCINT****************************TCVSHLEAIKKEITSLKIYINYYEQYCEYDPFFTPTELANPWLTDNPEFWDEEKQAKEISARRIKRWAFSLQELLKDPLGRDHFTKFLDKEFSGENLKFWEAV****
*****SL*ELSRALCPKSLLYLQINIVWSDWFTAEALHIAHLMASHGYLFPIEEHVLTVKNDNTFYRFQTPYFWPSNCWEPENTDYAVYLCKRT********LADYEAENLALLQKMFSRKWEFIFMQAEA***************LDSQERAFWDVHRPMPGCI*************************************AIKKEITSLKIYINYYEQYCEYDPFFT**EL***WLTDNPEFWDEEKQAKEISARRIKRWAFSLQELLKDPLGRDHFTKFLDKEFSGENLKFWEAVQEYT
**********SRALCPKSLLYLQINIVWSDWFTAEALHIAHLMASHGYLFPIEEHVLTVKNDNTFYRFQTPYFWPSNCWEPENTDYAVYLCKRTMQNKTRLELADYEAENLALLQKMFSRKWEFIFMQAE***********LERKVLDSQERAFWDVHRPMPGCINTTEVDMKK***********************VSHLEAIKKEITSLKIYINYYEQYCEYDPFFTPTELANPWLTDNPEFWDEEKQAKEISARRIKRWAFSLQELLKDPLGRDHFTKFLDKEFSGENLKFWEAVQEYT
******LSELSRALCPKSLLYLQINIVWSDWFTAEALHIAHLMASHGYLFPIEEHVLTVKNDNTFYRFQTPYFWPSNCWEPENTDYAVYLCKRTMQNKTRLELADYEAENLALLQKMFSRKWEFIFMQAEAQSKVDKKRDKLERKVLDSQERAFWDVHRPMPGCINTTEVDMKKVDTKK*KTSSTIKTMKSDLSSTCVSHLEAIKKEITSLKIYINYYEQYCEYDPFFTPTELANPWLTDNPEFWDEEKQAKEISARRIKRWAFSLQELLKDPLGRDHFTKFLDKEFSGENLKFWEAVQEYT
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MKPQESLSELSRALCPKSLLYLQINIVWSDWFTAEALHIAHLMASHGYLFPIEEHVLTVKNDNTFYRFQTPYFWPSNCWEPENTDYAVYLCKRTMQNKTRLELADYEAENLALLQKMFSRKWEFIFMQAEAQSKVDKKRDKLERKVLDSQERAFWDVHRPMPGCINTTEVDMKKVDTKKNKTSSTIKTMKSDLSSTCVSHLEAIKKEITSLKIYINYYEQYCEYDPFFTPTELANPWLTDNPEFWDEEKQAKEISARRIKRWAFSLQELLKDPLGRDHFTKFLDKEFSGENLKFWEAVQEYT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query302 2.2.26 [Sep-21-2011]
O46470469 Regulator of G-protein si yes N/A 0.880 0.567 0.588 2e-99
O54829469 Regulator of G-protein si yes N/A 0.870 0.560 0.585 3e-99
P49803 477 Regulator of G-protein si yes N/A 0.880 0.557 0.588 7e-99
P49802 495 Regulator of G-protein si yes N/A 0.880 0.537 0.588 7e-99
Q9Z2H2472 Regulator of G-protein si no N/A 0.880 0.563 0.571 1e-97
P49758472 Regulator of G-protein si no N/A 0.880 0.563 0.571 2e-97
P49809 555 Regulator of G-protein si yes N/A 0.443 0.241 0.823 9e-71
O46469 484 Regulator of G-protein si no N/A 0.887 0.553 0.384 2e-55
Q80ZD1 484 Regulator of G-protein si N/A N/A 0.903 0.564 0.388 3e-55
O54828 675 Regulator of G-protein si no N/A 0.874 0.391 0.391 4e-55
>sp|O46470|RGS7_BOVIN Regulator of G-protein signaling 7 OS=Bos taurus GN=RGS7 PE=1 SV=1 Back     alignment and function desciption
 Score =  362 bits (928), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 173/294 (58%), Positives = 218/294 (74%), Gaps = 28/294 (9%)

Query: 34  AEALHIAHLMASHGYLFPIEEHVLTVKNDNTFYRFQTPYFWPSNCWEPENTDYAVYLCKR 93
            EALH+  LMA+HGY FPI +HVLT+K+D TFYRFQTPYFWPSNCWEPENTDYAVYLCKR
Sbjct: 76  VEALHLGTLMAAHGYFFPISDHVLTLKDDGTFYRFQTPYFWPSNCWEPENTDYAVYLCKR 135

Query: 94  TMQNKTRLELADYEAENLALLQKMFSRKWEFIFMQAEAQSKVDKKRDKLERKVLDSQERA 153
           TMQNK RLELADYEAE+LA LQ+ F+RKWEFIFMQAEAQ+KVDKKRDK+ERK+LDSQERA
Sbjct: 136 TMQNKARLELADYEAESLARLQRAFARKWEFIFMQAEAQAKVDKKRDKIERKILDSQERA 195

Query: 154 FWDVHRPMPGCINTTEVDMKKVDTKKN--KTSSTIKTMKSDLSSTCVSHL---------- 201
           FWDVHRP+PGC+NTTEVD+KK    +N  KT  ++  +++D+ S   +H           
Sbjct: 196 FWDVHRPVPGCVNTTEVDIKKSSRMRNPHKTRKSVYGLQNDIRSHSPTHTPTPETKPPTE 255

Query: 202 EAIKKEITSLKIYIN---------------YYEQYCEYDPFFTPTELANPWLTDNPEFWD 246
           + ++++I   +I ++               Y EQY EYDPF  P + +NPWL+D+  FW+
Sbjct: 256 DELQQQIKYWQIQLDRHRLKMSKVADSLLSYTEQYVEYDPFLAPPDPSNPWLSDDTTFWE 315

Query: 247 EEKQAKEISARRIKRWAFSLQELLKDPLGRDHFTKFLDKEFSGENLKFWEAVQE 300
            E  +KE S +R+KRW F + E LKDP+GR+ F KFL+ EFS ENL+FW AV++
Sbjct: 316 LEA-SKEPSQQRVKRWGFGMDEALKDPVGREQFLKFLESEFSSENLRFWLAVED 368
Inhibits signal transduction by increasing the GTPase activity of G protein alpha subunits thereby driving them into their inactive GDP-bound form. Activity on G(o)-alpha is specifically enhanced by the RGS6/Gbeta5 dimer.
Bos taurus (taxid: 9913)
>sp|O54829|RGS7_MOUSE Regulator of G-protein signaling 7 OS=Mus musculus GN=Rgs7 PE=1 SV=2 Back     alignment and function description
>sp|P49803|RGS7_RAT Regulator of G-protein signaling 7 OS=Rattus norvegicus GN=Rgs7 PE=2 SV=2 Back     alignment and function description
>sp|P49802|RGS7_HUMAN Regulator of G-protein signaling 7 OS=Homo sapiens GN=RGS7 PE=1 SV=3 Back     alignment and function description
>sp|Q9Z2H2|RGS6_MOUSE Regulator of G-protein signaling 6 OS=Mus musculus GN=Rgs6 PE=1 SV=2 Back     alignment and function description
>sp|P49758|RGS6_HUMAN Regulator of G-protein signaling 6 OS=Homo sapiens GN=RGS6 PE=1 SV=5 Back     alignment and function description
>sp|P49809|EGL10_CAEEL Regulator of G-protein signaling egl-10 OS=Caenorhabditis elegans GN=egl-10 PE=2 SV=1 Back     alignment and function description
>sp|O46469|RGS9_BOVIN Regulator of G-protein signaling 9 OS=Bos taurus GN=RGS9 PE=1 SV=1 Back     alignment and function description
>sp|Q80ZD1|RGS9_TAMST Regulator of G-protein signaling 9 OS=Tamias striatus PE=1 SV=1 Back     alignment and function description
>sp|O54828|RGS9_MOUSE Regulator of G-protein signaling 9 OS=Mus musculus GN=Rgs9 PE=1 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query302
242019109 471 Regulator of G-protein signaling, putati 0.930 0.596 0.713 1e-118
91075938 492 PREDICTED: similar to regulator of g pro 0.877 0.538 0.716 1e-118
307197651 519 Regulator of G-protein signaling 7 [Harp 0.880 0.512 0.698 1e-116
307186263 747 Regulator of G-protein signaling 7 [Camp 0.910 0.368 0.679 1e-116
383861962 520 PREDICTED: regulator of G-protein signal 0.880 0.511 0.693 1e-115
332030007 592 Regulator of G-protein signaling 6 [Acro 0.880 0.449 0.693 1e-114
328789178 519 PREDICTED: regulator of G-protein signal 0.880 0.512 0.696 1e-114
380018838 510 PREDICTED: regulator of G-protein signal 0.880 0.521 0.696 1e-114
170059214 515 regulator of G-protein signaling 7 [Cule 0.870 0.510 0.691 1e-113
340726932 517 PREDICTED: regulator of G-protein signal 0.867 0.506 0.695 1e-113
>gi|242019109|ref|XP_002430008.1| Regulator of G-protein signaling, putative [Pediculus humanus corporis] gi|212515066|gb|EEB17270.1| Regulator of G-protein signaling, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
 Score =  429 bits (1104), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 204/286 (71%), Positives = 233/286 (81%), Gaps = 5/286 (1%)

Query: 19  LLYLQINIVWSDWFTAEALHIAHLMASHGYLFPIEEHVLTVKNDNTFYRFQTPYFWPSNC 78
           +L++  N+   D    EALH+AHLMASHGY FPI++H LTVKNDN+FYRFQTPYFWPSNC
Sbjct: 82  ILWMTKNLDVDD--QVEALHVAHLMASHGYFFPIDDHALTVKNDNSFYRFQTPYFWPSNC 139

Query: 79  WEPENTDYAVYLCKRTMQNKTRLELADYEAENLALLQKMFSRKWEFIFMQAEAQSKVDKK 138
           WEPENTDYAVYLCKRTMQNKTRLELADYEAENLA LQKMFSRKWEFIFMQAEAQSKVDKK
Sbjct: 140 WEPENTDYAVYLCKRTMQNKTRLELADYEAENLARLQKMFSRKWEFIFMQAEAQSKVDKK 199

Query: 139 RDKLERKVLDSQERAFWDVHRPMPGCINTTEVDMKKVDTKKNKTSSTIKTMKSDLSSTCV 198
           RDKLERKVLDSQERAFWDVHRPMPGC+NTTE D+KKV  K  K  S    + S  +    
Sbjct: 200 RDKLERKVLDSQERAFWDVHRPMPGCVNTTESDIKKVCRKITKVESNQSGIDSLKNQILF 259

Query: 199 SHLEAIKKEITSLKI---YINYYEQYCEYDPFFTPTELANPWLTDNPEFWDEEKQAKEIS 255
                 ++ I   K+   +INY+EQY EYDPFF P EL+NPW++D P+ W++EK  KE+S
Sbjct: 260 LKSRLDRRNIKVSKVAEAHINYHEQYAEYDPFFMPPELSNPWISDCPDLWEQEKNIKELS 319

Query: 256 ARRIKRWAFSLQELLKDPLGRDHFTKFLDKEFSGENLKFWEAVQEY 301
           ARR+KRWAFSL+ELL+DP GRDHF  FL+KEFSGENLKFWEAVQE+
Sbjct: 320 ARRVKRWAFSLKELLQDPAGRDHFLSFLEKEFSGENLKFWEAVQEF 365

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|91075938|ref|XP_967637.1| PREDICTED: similar to regulator of g protein signaling [Tribolium castaneum] gi|270014646|gb|EFA11094.1| hypothetical protein TcasGA2_TC004691 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|307197651|gb|EFN78830.1| Regulator of G-protein signaling 7 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|307186263|gb|EFN71926.1| Regulator of G-protein signaling 7 [Camponotus floridanus] Back     alignment and taxonomy information
>gi|383861962|ref|XP_003706453.1| PREDICTED: regulator of G-protein signaling 7-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|332030007|gb|EGI69832.1| Regulator of G-protein signaling 6 [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|328789178|ref|XP_393403.3| PREDICTED: regulator of G-protein signaling 7-like [Apis mellifera] Back     alignment and taxonomy information
>gi|380018838|ref|XP_003693328.1| PREDICTED: regulator of G-protein signaling 7-like [Apis florea] Back     alignment and taxonomy information
>gi|170059214|ref|XP_001865265.1| regulator of G-protein signaling 7 [Culex quinquefasciatus] gi|167878093|gb|EDS41476.1| regulator of G-protein signaling 7 [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|340726932|ref|XP_003401805.1| PREDICTED: regulator of G-protein signaling 7-like [Bombus terrestris] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query302
FB|FBgn0024941647 RSG7 "Regulator of G-protein s 0.877 0.409 0.679 1.8e-101
UNIPROTKB|O46470 469 RGS7 "Regulator of G-protein s 0.463 0.298 0.842 2.3e-93
UNIPROTKB|F1P8J9 461 RGS7 "Uncharacterized protein" 0.463 0.303 0.842 2.3e-93
UNIPROTKB|F1P8K5 482 RGS7 "Uncharacterized protein" 0.463 0.290 0.842 2.3e-93
MGI|MGI:1346089 469 Rgs7 "regulator of G protein s 0.463 0.298 0.842 2.3e-93
RGD|3570 477 Rgs7 "regulator of G-protein s 0.463 0.293 0.842 2.3e-93
UNIPROTKB|P49803 477 Rgs7 "Regulator of G-protein s 0.463 0.293 0.842 2.3e-93
UNIPROTKB|B7Z257 451 RGS7 "cDNA FLJ61685, highly si 0.463 0.310 0.842 3e-93
UNIPROTKB|P49802 495 RGS7 "Regulator of G-protein s 0.463 0.282 0.842 3e-93
UNIPROTKB|F1P0L1 420 RGS7 "Uncharacterized protein" 0.463 0.333 0.842 2.1e-92
FB|FBgn0024941 RSG7 "Regulator of G-protein signalling 7" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 1006 (359.2 bits), Expect = 1.8e-101, P = 1.8e-101
 Identities = 189/278 (67%), Positives = 215/278 (77%)

Query:    35 EALHIAHLMASHGYLFPIEEHVLTVKNDNTFYRFQTPYFWPSNCWEPENTDYAVYLCKRT 94
             EALH AHL++SHGY+FPI++H LTVKND TFYRFQTPYFWPSNCWEPENTDYAVYLCKRT
Sbjct:   270 EALHFAHLLSSHGYIFPIDDHALTVKNDGTFYRFQTPYFWPSNCWEPENTDYAVYLCKRT 329

Query:    95 MQNKTRLELADYEAENLALLQKMFSRKWEFIFMQAEAQSKVDKKRDKLERKVLDSQERAF 154
             MQNKTRLELADYEAENLA LQKMFSRKWEFIFMQAE+QSKV KKRDKLERKVLDSQERAF
Sbjct:   330 MQNKTRLELADYEAENLAKLQKMFSRKWEFIFMQAESQSKVAKKRDKLERKVLDSQERAF 389

Query:   155 WDVHRPMPGCINTTEVDMKKVDXXXXXXXXXXXXXXXDLSSTCVSHLEAI------KKEI 208
             WDVHRPMPGC+NTTE+D+KK                  L+   V  L  I      K E 
Sbjct:   390 WDVHRPMPGCVNTTEIDIKKA-YRRGGSSHGTGSAGASLAKNPVEQLTRIIALRKQKLER 448

Query:   209 TSLKI------YINYYEQYCEYDPFFTPTELANPWLTDNPEFWDEEKQAKEISARRIKRW 262
              ++K+       + YY+QY E+D F T  EL NPW TD+ E WD EK +KE+  RR+KRW
Sbjct:   449 RTIKVSKAAEALVAYYDQYNEFDYFITSPELPNPWQTDSTEMWDTEKNSKEVPVRRVKRW 508

Query:   263 AFSLQELLKDPLGRDHFTKFLDKEFSGENLKFWEAVQE 300
             AFSL+ELL D +GR+ FTKFL+KE+SGENLKFWE+VQE
Sbjct:   509 AFSLRELLNDAIGREQFTKFLEKEYSGENLKFWESVQE 546
GO:0008277 "regulation of G-protein coupled receptor protein signaling pathway" evidence=ISS
GO:0004871 "signal transducer activity" evidence=IEA
GO:0005834 "heterotrimeric G-protein complex" evidence=IEA
GO:0035556 "intracellular signal transduction" evidence=IEA
GO:0038032 "termination of G-protein coupled receptor signaling pathway" evidence=IEA
GO:0005886 "plasma membrane" evidence=IBA
GO:0005096 "GTPase activator activity" evidence=IBA
GO:0005737 "cytoplasm" evidence=IBA
UNIPROTKB|O46470 RGS7 "Regulator of G-protein signaling 7" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1P8J9 RGS7 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1P8K5 RGS7 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
MGI|MGI:1346089 Rgs7 "regulator of G protein signaling 7" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|3570 Rgs7 "regulator of G-protein signaling 7" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|P49803 Rgs7 "Regulator of G-protein signaling 7" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|B7Z257 RGS7 "cDNA FLJ61685, highly similar to Regulator of G-protein signaling 7" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|P49802 RGS7 "Regulator of G-protein signaling 7" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1P0L1 RGS7 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O46470RGS7_BOVINNo assigned EC number0.58840.88070.5671yesN/A
O54829RGS7_MOUSENo assigned EC number0.58580.87080.5607yesN/A
P49809EGL10_CAEELNo assigned EC number0.82390.44370.2414yesN/A
P49803RGS7_RATNo assigned EC number0.58840.88070.5576yesN/A
P49802RGS7_HUMANNo assigned EC number0.58840.88070.5373yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query302
cd08705121 cd08705, RGS_R7-like, Regulator of G protein signa 7e-22
cd0445088 cd04450, DEP_RGS7-like, DEP (Dishevelled, Egl-10, 6e-15
cd08740126 cd08740, RGS_RGS11, Regulator of G protein signali 4e-14
cd08737125 cd08737, RGS_RGS6, Regulator of G protein signalin 5e-14
cd08738121 cd08738, RGS_RGS7, Regulator of G protein signalin 8e-13
cd08739121 cd08739, RGS_RGS9, Regulator of G protein signalin 3e-12
smart00315118 smart00315, RGS, Regulator of G protein signalling 7e-10
pfam00615117 pfam00615, RGS, Regulator of G protein signaling d 2e-09
cd08743129 cd08743, RGS_RGS14, Regulator of G protein signali 9e-09
cd08706113 cd08706, RGS_R12-like, Regulator of G protein sign 8e-07
smart0004977 smart00049, DEP, Domain found in Dishevelled, Egl- 2e-06
smart0022463 smart00224, GGL, G protein gamma subunit-like moti 2e-06
cd07440113 cd07440, RGS, Regulator of G protein signaling (RG 5e-06
cd08718118 cd08718, RGS_RZ-like, Regulator of G protein signa 2e-05
cd08745118 cd08745, RGS_RGS19, Regulator of G protein signali 5e-05
cd08741113 cd08741, RGS_RGS10, Regulator of G protein signali 6e-05
cd08746167 cd08746, RGS_RGS20, Regulator of G protein signali 1e-04
cd08742115 cd08742, RGS_RGS12, Regulator of G protein signali 1e-04
pfam0061074 pfam00610, DEP, Domain found in Dishevelled, Egl-1 3e-04
cd08717114 cd08717, RGS_RGS5, Regulator of G protein signalin 0.001
cd08708 148 cd08708, RGS_FLBA, Regulator of G protein signalin 0.002
cd08744118 cd08744, RGS_RGS17, Regulator of G protein signali 0.003
cd08711125 cd08711, RGS_RGS8, Regulator of G protein signalin 0.003
cd0006857 cd00068, GGL, G protein gamma subunit-like motifs, 0.004
cd08712114 cd08712, RGS_RGS18, Regulator of G protein signali 0.004
>gnl|CDD|188660 cd08705, RGS_R7-like, Regulator of G protein signaling (RGS) domain found in the R7 subfamily of proteins Back     alignment and domain information 
 Score = 88.1 bits (219), Expect = 7e-22
 Identities = 31/43 (72%), Positives = 37/43 (86%)

Query: 258 RIKRWAFSLQELLKDPLGRDHFTKFLDKEFSGENLKFWEAVQE 300
           R+KRW FS  ELLKDP+GR+ F KFL+KEFSGENL+FWEA Q+
Sbjct: 1   RVKRWGFSFSELLKDPVGREQFLKFLEKEFSGENLRFWEACQD 43

The RGS (Regulator of G-protein Signaling) domain is an essential part of the R7 (Neuronal RGS) protein subfamily of the RGS protein family, a diverse group of multifunctional proteins that regulate cellular signaling events downstream of G-protein coupled receptors (GPCRs). As a major G-protein regulator, RGS domain containing proteins are involved in many crucial cellular processes such as regulation of intracellular trafficking, glial differentiation, embryonic axis formation, skeletal and muscle development, and cell migration during early embryogenesis. The R7 subfamily includes RGS6, RGS7, RGS9, and RGS11, all of which, in humans, are expressed predominantly in the nervous system, form an obligatory complex with G-beta-5, and play important roles in the regulation of crucial neuronal processes. In addition, R7 proteins were found to bind many other proteins outside of the G protein signaling pathways including: m-opioid receptor, beta-arrestin, alpha-actinin-2, NMDAR, polycystin, spinophilin, guanylyl cyclase, among others. Length = 121
>gnl|CDD|239897 cd04450, DEP_RGS7-like, DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in RGS (regulator of G-protein signaling) proteins of the subfamily R7 Back     alignment and domain information
>gnl|CDD|188694 cd08740, RGS_RGS11, Regulator of G protein signaling (RGS) domain found in the RGS11 protein Back     alignment and domain information
>gnl|CDD|188691 cd08737, RGS_RGS6, Regulator of G protein signaling (RGS) domain found in the RGS6 protein Back     alignment and domain information
>gnl|CDD|188692 cd08738, RGS_RGS7, Regulator of G protein signaling (RGS) domain found in the RGS7 protein Back     alignment and domain information
>gnl|CDD|188693 cd08739, RGS_RGS9, Regulator of G protein signaling (RGS) domain found in the RGS9 protein Back     alignment and domain information
>gnl|CDD|214613 smart00315, RGS, Regulator of G protein signalling domain Back     alignment and domain information
>gnl|CDD|216023 pfam00615, RGS, Regulator of G protein signaling domain Back     alignment and domain information
>gnl|CDD|188697 cd08743, RGS_RGS14, Regulator of G protein signaling (RGS) domain found in the RGS14 protein Back     alignment and domain information
>gnl|CDD|188661 cd08706, RGS_R12-like, Regulator of G protein signaling (RGS) domain found in the R12 subfamily of proteins Back     alignment and domain information
>gnl|CDD|214489 smart00049, DEP, Domain found in Dishevelled, Egl-10, and Pleckstrin Back     alignment and domain information
>gnl|CDD|128520 smart00224, GGL, G protein gamma subunit-like motifs Back     alignment and domain information
>gnl|CDD|188659 cd07440, RGS, Regulator of G protein signaling (RGS) domain superfamily Back     alignment and domain information
>gnl|CDD|188673 cd08718, RGS_RZ-like, Regulator of G protein signaling (RGS) domain found in the RZ protein Back     alignment and domain information
>gnl|CDD|188699 cd08745, RGS_RGS19, Regulator of G protein signaling (RGS) domain found in the RGS19 protein Back     alignment and domain information
>gnl|CDD|188695 cd08741, RGS_RGS10, Regulator of G protein signaling (RGS) domain found in the RGS10 protein Back     alignment and domain information
>gnl|CDD|188700 cd08746, RGS_RGS20, Regulator of G protein signaling (RGS) domain found in the RGS20 protein Back     alignment and domain information
>gnl|CDD|188696 cd08742, RGS_RGS12, Regulator of G protein signaling (RGS) domain found in the RGS12 protein Back     alignment and domain information
>gnl|CDD|216020 pfam00610, DEP, Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) Back     alignment and domain information
>gnl|CDD|188672 cd08717, RGS_RGS5, Regulator of G protein signaling (RGS) domain found in the RGS5 protein Back     alignment and domain information
>gnl|CDD|188663 cd08708, RGS_FLBA, Regulator of G protein signaling (RGS) domain found in the FLBA (Fluffy Low BrlA) protein Back     alignment and domain information
>gnl|CDD|188698 cd08744, RGS_RGS17, Regulator of G protein signaling (RGS) domain found in the RGS17 protein Back     alignment and domain information
>gnl|CDD|188666 cd08711, RGS_RGS8, Regulator of G protein signaling (RGS) domain found in the RGS8 protein Back     alignment and domain information
>gnl|CDD|238024 cd00068, GGL, G protein gamma subunit-like motifs, the alpha-helical G-gamma chain dimerizes with the G-beta propeller subunit as part of the heterotrimeric G-protein complex; involved in signal transduction via G-protein-coupled receptors Back     alignment and domain information
>gnl|CDD|188667 cd08712, RGS_RGS18, Regulator of G protein signaling (RGS) domain found in the RGS18 protein Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 302
KOG3589|consensus 221 99.72
cd0445088 DEP_RGS7-like DEP (Dishevelled, Egl-10, and Plecks 99.62
smart0022463 GGL G protein gamma subunit-like motifs. 99.24
cd0443981 DEP_1_P-Rex DEP (Dishevelled, Egl-10, and Pleckstr 99.2
smart0004977 DEP Domain found in Dishevelled, Egl-10, and Pleck 99.08
cd0006857 GGL G protein gamma subunit-like motifs, the alpha 99.02
cd0444599 DEP_PLEK1 DEP (Dishevelled, Egl-10, and Pleckstrin 98.99
PF0061074 DEP: Domain found in Dishevelled, Egl-10, and Plec 98.97
cd0444383 DEP_GPR155 DEP (Dishevelled, Egl-10, and Pleckstri 98.83
cd0443884 DEP_dishevelled DEP (Dishevelled, Egl-10, and Plec 98.72
cd0444881 DEP_PIKfyve DEP (Dishevelled, Egl-10, and Pleckstr 98.59
PF0063168 G-gamma: GGL domain; InterPro: IPR015898 This entr 98.46
cd0444983 DEP_DEPDC5-like DEP (Dishevelled, Egl-10, and Plec 98.44
cd0437181 DEP DEP domain, named after Dishevelled, Egl-10, a 98.37
cd0444282 DEP_1_DEP6 DEP (Dishevelled, Egl-10, and Pleckstri 98.1
cd0444185 DEP_2_DEP6 DEP (Dishevelled, Egl-10, and Pleckstri 97.97
cd04437125 DEP_Epac DEP (Dishevelled, Egl-10, and Pleckstrin) 97.67
cd0444093 DEP_2_P-Rex DEP (Dishevelled, Egl-10, and Pleckstr 97.62
cd04444109 DEP_PLEK2 DEP (Dishevelled, Egl-10, and Pleckstrin 97.32
cd0444695 DEP_DEPDC4 DEP (Dishevelled, Egl-10, and Pleckstri 96.49
cd0444792 DEP_BRCC3 DEP (Dishevelled, Egl-10, and Pleckstrin 96.33
KOG4119|consensus71 96.08
cd0443684 DEP_fRgd2 DEP (Dishevelled, Egl-10, and Pleckstrin 94.17
KOG3571|consensus626 81.56
>KOG3589|consensus Back     alignment and domain information 
Probab=99.72  E-value=8.9e-18  Score=151.46  Aligned_cols=89  Identities=27%  Similarity=0.393  Sum_probs=82.4

Q ss_pred             HHHHHHhhhhccCCCCCCCCCCCCCCCCCCccccccccccCCCCHHHHhHHHHHHHHHhCCcccHHHHHHhhhhcCCchh
Q psy10896        212 KIYINYYEQYCEYDPFFTPTELANPWLTDNPEFWDEEKQAKEISARRIKRWAFSLQELLKDPLGRDHFTKFLDKEFSGEN  291 (302)
Q Consensus       212 ~~li~y~eqy~~~Dp~Ls~~~psNPWisDd~~~W~~n~~~~~pt~~~v~rWa~Sfe~LL~dp~G~~~F~~FLkkEfSeEN  291 (302)
                      ...+.+..++..+|++.+.+  .|||+.+....|....+++.|+.++|.+|+.||++||+|+.|+..|..||++|||+||
T Consensus        29 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~e~~~~w~~sf~~L~~~~~G~~~F~~fLk~e~Seen  106 (221)
T KOG3589|consen   29 ITRESTLTRLARNDRRISNP--GAPSTLKSLASGKGLEPLELPSREEVESWAKSFEKLLADEAGRAVFAEFLKSEFSEEN  106 (221)
T ss_pred             HHhHHHhhccccccccccCC--CCCCCCCchhhhcccccccCCCHHHHHHHHHhHHHHhhChhhHHHHHHHHHHHhhHhH
Confidence            33788888999999998877  9999999999997776677999999999999999999999999999999999999999


Q ss_pred             hHHHHhhcccC
Q psy10896        292 LKFWEAVQEYT  302 (302)
Q Consensus       292 L~FWlAcE~~K  302 (302)
                      |+||+|||+||
T Consensus       107 i~FW~ace~~k  117 (221)
T KOG3589|consen  107 LEFWLACEEFK  117 (221)
T ss_pred             HHHHHHHHHHH
Confidence            99999999986

>cd04450 DEP_RGS7-like DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in RGS (regulator of G-protein signaling) proteins of the subfamily R7 Back     alignment and domain information
>smart00224 GGL G protein gamma subunit-like motifs Back     alignment and domain information
>cd04439 DEP_1_P-Rex DEP (Dishevelled, Egl-10, and Pleckstrin) domain 1 found in P-Rex-like proteins Back     alignment and domain information
>smart00049 DEP Domain found in Dishevelled, Egl-10, and Pleckstrin Back     alignment and domain information
>cd00068 GGL G protein gamma subunit-like motifs, the alpha-helical G-gamma chain dimerizes with the G-beta propeller subunit as part of the heterotrimeric G-protein complex; involved in signal transduction via G-protein-coupled receptors Back     alignment and domain information
>cd04445 DEP_PLEK1 DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in pleckstrin 1-like proteins Back     alignment and domain information
>PF00610 DEP: Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP); InterPro: IPR000591 This entry represents the DEP (Dishevelled, Egl-10 and Pleckstrin) domain, a globular domain of about 80 residues that is found in over 50 proteins involved in G-protein signalling pathways Back     alignment and domain information
>cd04443 DEP_GPR155 DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in GPR155-like proteins Back     alignment and domain information
>cd04438 DEP_dishevelled DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in dishevelled-like proteins Back     alignment and domain information
>cd04448 DEP_PIKfyve DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in fungal RhoGEF (GDP/GTP exchange factor) PIKfyve-like proteins Back     alignment and domain information
>PF00631 G-gamma: GGL domain; InterPro: IPR015898 This entry represents the G protein gamma subunit and the GGL (G protein gamma-like) domain, which are related in sequence and are comprised of an extended alpha-helical polypeptide Back     alignment and domain information
>cd04449 DEP_DEPDC5-like DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in DEPDC5-like proteins Back     alignment and domain information
>cd04371 DEP DEP domain, named after Dishevelled, Egl-10, and Pleckstrin, where this domain was first discovered Back     alignment and domain information
>cd04442 DEP_1_DEP6 DEP (Dishevelled, Egl-10, and Pleckstrin) domain 1 found in DEP6-like proteins Back     alignment and domain information
>cd04441 DEP_2_DEP6 DEP (Dishevelled, Egl-10, and Pleckstrin) domain 2 found in DEP6-like proteins Back     alignment and domain information
>cd04437 DEP_Epac DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in Epac-like proteins Back     alignment and domain information
>cd04440 DEP_2_P-Rex DEP (Dishevelled, Egl-10, and Pleckstrin) domain 2 found in P-Rex-like proteins Back     alignment and domain information
>cd04444 DEP_PLEK2 DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in pleckstrin 2-like proteins Back     alignment and domain information
>cd04446 DEP_DEPDC4 DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in DEPDC4-like proteins Back     alignment and domain information
>cd04447 DEP_BRCC3 DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in BBRC3-like proteins Back     alignment and domain information
>KOG4119|consensus Back     alignment and domain information
>cd04436 DEP_fRgd2 DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in fungal RhoGAP (GTPase-activator protein) Rgd2-like proteins Back     alignment and domain information
>KOG3571|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query302
2pbi_A424 The Multifunctional Nature Of Gbeta5RGS9 REVEALED F 2e-54
2a72_A146 Structure Of The Regulator Of G-Protein Signaling D 6e-12
2es0_A148 Structure Of The Regulator Of G-Protein Signaling D 2e-11
1fqj_B147 Crystal Structure Of The Heterotrimeric Complex Of 3e-11
1fqi_A147 Rgs9 Rgs Domain Length = 147 4e-11
2d9j_A139 Solution Structure Of The Rgs Domain Of Regulator O 8e-11
2jnu_A 154 Solution Structure Of The Rgs Domain Of Human Rgs14 9e-08
2ebz_A155 Solution Structure Of The Rgs Domain From Human Reg 3e-07
2bv1_A145 Regulator Of G-Protein Signalling 1 (Human) Length 2e-05
2i59_A138 Solution Structure Of Rgs10 Length = 138 2e-05
2ihb_B153 Crystal Structure Of The Heterodimeric Complex Of H 4e-05
2dlr_A149 Solution Structure Of The Rgs Domain Of Human Regul 5e-05
1agr_E 205 Complex Of Alf4-Activated Gi-Alpha-1 With Rgs4 Leng 2e-04
1ezt_A 166 High-Resolution Solution Structure Of Free Rgs4 By 2e-04
>pdb|2PBI|A Chain A, The Multifunctional Nature Of Gbeta5RGS9 REVEALED FROM ITS CRYSTAL Structure Length = 424 Back     alignment and structure 
Iteration: 1

 Score =  209 bits (531), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 104/268 (38%), Positives = 157/268 (58%), Gaps = 4/268 (1%)
Query: 35  EALHIAHLMASHGYLFPIEE-HVLTVKNDNTFYRFQTPYFWPSNCWEPENTDYAVYLCKR 93
           EA ++ + +  +GY++P+++   L +K D++ YRFQTPYFWP+  W  E+TDYA+YL KR
Sbjct: 71  EAQNLGNFIVKYGYIYPLQDPKNLILKPDSSLYRFQTPYFWPTQQWPAEDTDYAIYLAKR 130
Query: 94  TMQNKTRLELADYEAENLALLQKMFSRKWEFIFMQAEAQSKVDKKRDKLERKVLDSQERA 153
            ++ K  LE  +YE EN   L K  + KW+F+ MQA+ Q +  K+R+K +R  LD QE+A
Sbjct: 131 NIKKKGILE--EYEKENYDFLNKKINYKWDFVIMQAKEQYRTGKERNKADRYALDCQEKA 188
Query: 154 FWDVHRPMPGCINTTEVDMKKVDXXXXXXXXXXXXXXXDLSSTCVSHLEAIKKEITSLKI 213
           +W VHR  PG  N  +  + +V                ++     + + +  K   SL  
Sbjct: 189 YWLVHRSPPGMNNVLDYGLDRVTNPNEVKKQTVTAVRKEIMYYQQALMRSTVKSSVSLGG 248
Query: 214 YINYYEQYCEYDPFFTPTELANPWLTDNPEFWDEEKQAKEISAR-RIKRWAFSLQELLKD 272
            + Y EQ+   D   +    +NPW+TD+ +FWD   +  EI  + R++RWAF+  EL++D
Sbjct: 249 IVKYSEQFSSNDAIMSGCLPSNPWITDDTQFWDLNAKLVEIPTKMRVERWAFNFSELIRD 308
Query: 273 PLGRDHFTKFLDKEFSGENLKFWEAVQE 300
           P GR  F  FL KEFSGENL FWEA ++
Sbjct: 309 PKGRQSFQYFLKKEFSGENLGFWEACED 336
>pdb|2A72|A Chain A, Structure Of The Regulator Of G-Protein Signaling Domain Of Rgs7 Length = 146 Back     alignment and structure
>pdb|2ES0|A Chain A, Structure Of The Regulator Of G-Protein Signaling Domain Of Rgs6 Length = 148 Back     alignment and structure
>pdb|1FQJ|B Chain B, Crystal Structure Of The Heterotrimeric Complex Of The Rgs Domain Of Rgs9, The Gamma Subunit Of Phosphodiesterase And The GtI1 CHIMERA ALPHA SUBUNIT [(RGS9)-(Pdegamma)- (GtI1ALPHA)-(Gdp)-(Alf4-)-(Mg2+)] Length = 147 Back     alignment and structure
>pdb|1FQI|A Chain A, Rgs9 Rgs Domain Length = 147 Back     alignment and structure
>pdb|2D9J|A Chain A, Solution Structure Of The Rgs Domain Of Regulator Of G- Protein Signaling 7 Length = 139 Back     alignment and structure
>pdb|2JNU|A Chain A, Solution Structure Of The Rgs Domain Of Human Rgs14 Length = 154 Back     alignment and structure
>pdb|2EBZ|A Chain A, Solution Structure Of The Rgs Domain From Human Regulator Of G-Protein Signaling 12 (Rgs12) Length = 155 Back     alignment and structure
>pdb|2BV1|A Chain A, Regulator Of G-Protein Signalling 1 (Human) Length = 145 Back     alignment and structure
>pdb|2I59|A Chain A, Solution Structure Of Rgs10 Length = 138 Back     alignment and structure
>pdb|2IHB|B Chain B, Crystal Structure Of The Heterodimeric Complex Of Human Rgs10 And Activated Gi Alpha 3 Length = 153 Back     alignment and structure
>pdb|2DLR|A Chain A, Solution Structure Of The Rgs Domain Of Human Regulator Of G-Protein Signaling 10 Length = 149 Back     alignment and structure
>pdb|1AGR|E Chain E, Complex Of Alf4-Activated Gi-Alpha-1 With Rgs4 Length = 205 Back     alignment and structure
>pdb|1EZT|A Chain A, High-Resolution Solution Structure Of Free Rgs4 By Nmr Length = 166 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query302
2pbi_A424 Regulator of G-protein signaling 9; helix WRAP, RG 1e-103
2ihd_A155 RGS8, regulator of G-protein signaling 8; signalin 1e-16
1fqi_A147 RGS9, regulator of G-protein signaling 9; phototra 3e-16
2bv1_A145 Regulator of G-protein signalling 1; RGS1, RGS, st 9e-16
2a72_A146 Regulator of G-protein signalling 7; human RGS7, r 4e-15
2crp_A150 RGS5, regulator of G-protein signaling 5; RGS doma 7e-15
2dlr_A149 RGS10, regulator of G-protein signaling 10; RGS do 2e-14
2jnu_A 154 RGS14, regulator of G-protein signaling 14; regula 3e-14
2ebz_A155 RGS12, regulator of G-protein signaling 12; RGS do 3e-14
2af0_A146 Regulator of G-protein signaling 2; helix, structu 5e-14
1zv4_X158 RGS17, regulator of G-protein signaling 17; human 6e-14
2oj4_A127 RGS3, regulator of G-protein signaling 3, RGP3; RG 8e-14
1cmz_A152 Protein (GAIP (G-alpha interacting) protein); RGS, 9e-14
2dlv_A140 RGS18, regulator of G-protein signaling 18; RGS do 1e-13
2jm5_A151 RGS18, regulator of G-protein signaling 18; signal 1e-13
2ihb_B153 Regulator of G-protein signalling 10, guanine nucl 2e-13
1dk8_A147 Axin; alpha-helix, PI-helix, signaling protein; HE 4e-13
3c7l_A137 Regulator of G-protein signaling 16; RGS, RGS16, G 1e-12
1agr_E 205 RGS4; GI-alpha-1, hydrolase, signal transduction, 5e-11
2cso_A127 Pleckstrin; DEP domain, platelet P47 protein, stru 4e-05
1uhw_A109 Pleckstrin; three-helix bundle, beta-ARM, riken st 7e-05
>2pbi_A Regulator of G-protein signaling 9; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} Length = 424 Back     alignment and structure
 Score =  306 bits (785), Expect = e-103
 Identities = 105/270 (38%), Positives = 161/270 (59%), Gaps = 4/270 (1%)

Query: 34  AEALHIAHLMASHGYLFPIEE-HVLTVKNDNTFYRFQTPYFWPSNCWEPENTDYAVYLCK 92
            EA ++ + +  +GY++P+++   L +K D++ YRFQTPYFWP+  W  E+TDYA+YL K
Sbjct: 70  LEAQNLGNFIVKYGYIYPLQDPKNLILKPDSSLYRFQTPYFWPTQQWPAEDTDYAIYLAK 129

Query: 93  RTMQNKTRLELADYEAENLALLQKMFSRKWEFIFMQAEAQSKVDKKRDKLERKVLDSQER 152
           R ++ K  LE  +YE EN   L K  + KW+F+ MQA+ Q +  K+R+K +R  LD QE+
Sbjct: 130 RNIKKKGILE--EYEKENYDFLNKKINYKWDFVIMQAKEQYRTGKERNKADRYALDCQEK 187

Query: 153 AFWDVHRPMPGCINTTEVDMKKVDTKKNKTSSTIKTMKSDLSSTCVSHLEAIKKEITSLK 212
           A+W VHR  PG  N  +  + +V         T+  ++ ++     + + +  K   SL 
Sbjct: 188 AYWLVHRSPPGMNNVLDYGLDRVTNPNEVKKQTVTAVRKEIMYYQQALMRSTVKSSVSLG 247

Query: 213 IYINYYEQYCEYDPFFTPTELANPWLTDNPEFWDEEKQAKEI-SARRIKRWAFSLQELLK 271
             + Y EQ+   D   +    +NPW+TD+ +FWD   +  EI +  R++RWAF+  EL++
Sbjct: 248 GIVKYSEQFSSNDAIMSGCLPSNPWITDDTQFWDLNAKLVEIPTKMRVERWAFNFSELIR 307

Query: 272 DPLGRDHFTKFLDKEFSGENLKFWEAVQEY 301
           DP GR  F  FL KEFSGENL FWEA ++ 
Sbjct: 308 DPKGRQSFQYFLKKEFSGENLGFWEACEDL 337
>2ihd_A RGS8, regulator of G-protein signaling 8; signaling protein, structural genomics, structura genomics consortium, SGC, signaling protein; 1.70A {Homo sapiens} PDB: 2ode_B* 2bt2_A Length = 155 Back     alignment and structure
>1fqi_A RGS9, regulator of G-protein signaling 9; phototransduction, ROD, GAP, signaling protein; 1.94A {Bos taurus} SCOP: a.91.1.1 PDB: 1fqj_B* 1fqk_B* Length = 147 Back     alignment and structure
>2bv1_A Regulator of G-protein signalling 1; RGS1, RGS, structural genomics, struct genomics consortium, B-cell activation, phosphorylation; 2.0A {Homo sapiens} PDB: 2gtp_C* Length = 145 Back     alignment and structure
>2a72_A Regulator of G-protein signalling 7; human RGS7, regulator of G-protein signaling 7, GTPase-activ proteins (GAP), structural genomics; 2.00A {Homo sapiens} PDB: 2d9j_A 2es0_A Length = 146 Back     alignment and structure
>2crp_A RGS5, regulator of G-protein signaling 5; RGS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 150 Back     alignment and structure
>2dlr_A RGS10, regulator of G-protein signaling 10; RGS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 149 Back     alignment and structure
>2jnu_A RGS14, regulator of G-protein signaling 14; regulator of G-protein signalling domain, structural genomics, structural genomics consortium, SGC; NMR {Homo sapiens} Length = 154 Back     alignment and structure
>2ebz_A RGS12, regulator of G-protein signaling 12; RGS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 155 Back     alignment and structure
>2af0_A Regulator of G-protein signaling 2; helix, structural genomics, structural genomics consortium, SGC, signaling protein; 2.30A {Homo sapiens} PDB: 2v4z_B* Length = 146 Back     alignment and structure
>1zv4_X RGS17, regulator of G-protein signaling 17; human RGSZ2, human RGS17(Z2), regulator of G-protein signali opioid receptor interacting protein; 2.40A {Homo sapiens} Length = 158 Back     alignment and structure
>2oj4_A RGS3, regulator of G-protein signaling 3, RGP3; RGS domain, signaling protein inhibitor; 2.30A {Homo sapiens} Length = 127 Back     alignment and structure
>1cmz_A Protein (GAIP (G-alpha interacting) protein); RGS, regulator of G protein, signaling protein regulation; NMR {Homo sapiens} SCOP: a.91.1.1 Length = 152 Back     alignment and structure
>2dlv_A RGS18, regulator of G-protein signaling 18; RGS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 140 Back     alignment and structure
>2jm5_A RGS18, regulator of G-protein signaling 18; signaling protein, structural genomics, structural genomics consortium, SGC; NMR {Homo sapiens} SCOP: a.91.1.1 PDB: 2owi_A Length = 151 Back     alignment and structure
>2ihb_B Regulator of G-protein signalling 10, guanine nucleotide-binding protein G(K) subunit A; RGS, heterotrimeric G protein, signall complex; HET: GDP; 2.71A {Homo sapiens} PDB: 2i59_A Length = 153 Back     alignment and structure
>1dk8_A Axin; alpha-helix, PI-helix, signaling protein; HET: SO4; 1.57A {Homo sapiens} SCOP: a.91.1.1 PDB: 1emu_A Length = 147 Back     alignment and structure
>3c7l_A Regulator of G-protein signaling 16; RGS, RGS16, GAP, GTPase activating protein, heterotrimeric G-protein, lipoprotein, palmitate, phosphoprotein; 1.89A {Mus musculus} PDB: 3c7k_B* 2ik8_B* Length = 137 Back     alignment and structure
>1agr_E RGS4; GI-alpha-1, hydrolase, signal transduction, complex (signal transduction/regulator), GTP-binding, GTPase activating protein; HET: GDP CIT; 2.80A {Rattus norvegicus} SCOP: a.91.1.1 PDB: 1ezt_A 1ezy_A Length = 205 Back     alignment and structure
>2cso_A Pleckstrin; DEP domain, platelet P47 protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.4.5.31 Length = 127 Back     alignment and structure
>1uhw_A Pleckstrin; three-helix bundle, beta-ARM, riken structural genomics/proteomics initiative, RSGI, structural genomics, signaling protein; NMR {Mus musculus} SCOP: a.4.5.31 PDB: 1w4m_A Length = 109 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query302
2pbi_A424 Regulator of G-protein signaling 9; helix WRAP, RG 100.0
1fqi_A147 RGS9, regulator of G-protein signaling 9; phototra 99.6
2a72_A146 Regulator of G-protein signalling 7; human RGS7, r 99.4
2cso_A127 Pleckstrin; DEP domain, platelet P47 protein, stru 99.4
2af0_A146 Regulator of G-protein signaling 2; helix, structu 99.39
2dlv_A140 RGS18, regulator of G-protein signaling 18; RGS do 99.39
2ihd_A155 RGS8, regulator of G-protein signaling 8; signalin 99.38
1cmz_A152 Protein (GAIP (G-alpha interacting) protein); RGS, 99.37
1zv4_X158 RGS17, regulator of G-protein signaling 17; human 99.37
2crp_A150 RGS5, regulator of G-protein signaling 5; RGS doma 99.35
1dk8_A147 Axin; alpha-helix, PI-helix, signaling protein; HE 99.35
2jm5_A151 RGS18, regulator of G-protein signaling 18; signal 99.35
3c7l_A137 Regulator of G-protein signaling 16; RGS, RGS16, G 99.34
2dlr_A149 RGS10, regulator of G-protein signaling 10; RGS do 99.33
2oj4_A127 RGS3, regulator of G-protein signaling 3, RGP3; RG 99.33
2bv1_A145 Regulator of G-protein signalling 1; RGS1, RGS, st 99.33
2ihb_B153 Regulator of G-protein signalling 10, guanine nucl 99.33
2ebz_A155 RGS12, regulator of G-protein signaling 12; RGS do 99.32
1uhw_A109 Pleckstrin; three-helix bundle, beta-ARM, riken st 99.26
1agr_E 205 RGS4; GI-alpha-1, hydrolase, signal transduction, 99.25
1v3f_A120 Pleckstrin 2; three-helix bundle, structural genom 99.09
1fsh_A105 Dishevelled-1; three-helix bundle, beta-ARM, signa 98.88
2ysr_A105 DEP domain-containing protein 1; structural genomi 98.45
1got_G73 GT-gamma; complex (GTP-binding/transducer), G prot 98.43
3ml6_A385 Chimeric complex between protein dishevlled2 HOMO 98.1
3v5w_G77 G gamma-I, guanine nucleotide-binding protein G(I) 96.72
>2pbi_A Regulator of G-protein signaling 9; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} Back     alignment and structure
Probab=100.00  E-value=1.5e-103  Score=769.32  Aligned_cols=269  Identities=39%  Similarity=0.772  Sum_probs=256.8

Q ss_pred             hcCchHHHHhhhccccCCchhhHhHHHHHHHHccceeeccCC-cccccCCCcccccccCcccCCCCCCCCCchHHHHHHH
Q psy10896         14 LCPKSLLYLQINIVWSDWFTAEALHIAHLMASHGYLFPIEEH-VLTVKNDNTFYRFQTPYFWPSNCWEPENTDYAVYLCK   92 (302)
Q Consensus        14 ~~~~iv~WL~~~l~~~~~~~~EAlHl~~ll~~~GYifPi~d~-~l~lk~D~t~YRFQtPYfWpS~~w~p~~~DYAIYL~K   92 (302)
                      .|.|+|+|||+|+++++   +||+|||++|++|||||||.|| .|++|||+|||||||||||||++|+|+|+||||||||
T Consensus        53 ~Gsd~V~WL~~~~~~~~---~EA~~lg~~L~~~Gyi~~v~d~~~~~fk~d~~~Yrfq~py~wps~~w~~~~~dyaiyl~k  129 (424)
T 2pbi_A           53 TGGDVLQWITQRLWISN---LEAQNLGNFIVKYGYIYPLQDPKNLILKPDSSLYRFQTPYFWPTQQWPAEDTDYAIYLAK  129 (424)
T ss_dssp             EHHHHHHHHHHHHTCCH---HHHHHHHHHHHHTTSEEESSSTTCCSCCSSSCEEEECCGGGSCCSSCCCCHHHHHHHHHH
T ss_pred             ccHHHHHHHHHcCCCCh---HHHHHHHHHHHHCCCEEeCCccccccccCCCeeEEeCCcccCcccCCCcchhHHHHHHHH
Confidence            47899999999999977   8999999999999999999997 8999999999999999999999999999999999999


Q ss_pred             hhhhhhcchhhhhHHHHHHHHHHHHhccchHHHHHHHHHHhhhhhhcChhhhhhhhhhchhhheecCCCCCCCCccccch
Q psy10896         93 RTMQNKTRLELADYEAENLALLQKMFSRKWEFIFMQAEAQSKVDKKRDKLERKVLDSQERAFWDVHRPMPGCINTTEVDM  172 (302)
Q Consensus        93 R~~rnk~rl~L~dyE~E~l~~L~k~~~~kWdfI~mQAeeQ~r~~K~R~K~dR~v~dsQErAfW~VhRPppg~~n~~e~~~  172 (302)
                      |+|||||  .|+|||+|+|++|+|.++|+|+||+|||++|+|++|+|||+||+|+||||||||+||||||||+|+||+|+
T Consensus       130 r~~~~~~--~l~~~e~e~~~~l~~~~~~~w~~i~~qa~~q~~~~k~r~k~~r~v~~~qe~a~w~vhrp~pg~~~~~e~~~  207 (424)
T 2pbi_A          130 RNIKKKG--ILEEYEKENYDFLNKKINYKWDFVIMQAKEQYRTGKERNKADRYALDCQEKAYWLVHRSPPGMNNVLDYGL  207 (424)
T ss_dssp             HHHTSSS--CCCHHHHHHHHHHHHHTGGGHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHSCCTTSCCTTCCCS
T ss_pred             hhhhhcC--CcchhHHHHHhhhhhhhcCchHHHHHHHHHHHhhhhccchhhhhhhhhhhhhhhhhhCCCCCCcccccccc
Confidence            9999999  57899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhccCCCccccccccCCCcccccccHHHHHHHHHHHHH---------------HHHHhhhhccCCCCCCCCCCCCCC
Q psy10896        173 KKVDTKKNKTSSTIKTMKSDLSSTCVSHLEAIKKEITSLKI---------------YINYYEQYCEYDPFFTPTELANPW  237 (302)
Q Consensus       173 ~k~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ei~~~~~---------------li~y~eqy~~~Dp~Ls~~~psNPW  237 (302)
                      .|..+.               ...+++|.+.++++|+.|+.               |++||+||.+|||||+||.++|||
T Consensus       208 ~~~~~~---------------~~~~~~~~~~~r~~veqLk~~l~~~rikvS~~~e~l~~y~e~~~~~DPll~g~~~sNPw  272 (424)
T 2pbi_A          208 DRVTNP---------------NEVKKQTVTAVRKEIMYYQQALMRSTVKSSVSLGGIVKYSEQFSSNDAIMSGCLPSNPW  272 (424)
T ss_dssp             CBSSCT---------------TCCCCCCHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHGGGCHHHHCCSSCCHH
T ss_pred             ccccCc---------------cccccccHHHHHHHHHHHHHHhcccceeHHHHHHHHHHHHHhhccCCCccccCCCCCCC
Confidence            885531               23457799999999999996               999999999999999999999999


Q ss_pred             CCCCccccccccc-cCCCCHHHHhHHHHHHHHHhCCcccHHHHHHhhhhcCCchhhHHHHhhcccC
Q psy10896        238 LTDNPEFWDEEKQ-AKEISARRIKRWAFSLQELLKDPLGRDHFTKFLDKEFSGENLKFWEAVQEYT  302 (302)
Q Consensus       238 isDd~~~W~~n~~-~~~pt~~~v~rWa~Sfe~LL~dp~G~~~F~~FLkkEfSeENL~FWlAcE~~K  302 (302)
                      ++||+++|+++++ +..||..+|.+|+.||+.||.||.|+..|++||++|||+|||.||+|||+||
T Consensus       273 ~~~d~~~w~~~~~~~~~pt~~~v~~w~~sle~LL~dp~g~~~F~~FL~~e~s~EnL~Fwlave~fk  338 (424)
T 2pbi_A          273 ITDDTQFWDLNAKLVEIPTKMRVERWAFNFSELIRDPKGRQSFQYFLKKEFSGENLGFWEACEDLK  338 (424)
T ss_dssp             HHCCTHHHHHTCTTCSSCBHHHHHHTTTCHHHHHHSHHHHHHHHHHHHHTTCTTHHHHHHHHHHHH
T ss_pred             CCCCccceeccCCCCCCCCHHHHhhhhcCHHHHHCCHHHHHHHHHHHHHhCChHHHHHHHHHHHHh
Confidence            9999999999987 8899999999999999999999999999999999999999999999999985
>1fqi_A RGS9, regulator of G-protein signaling 9; phototransduction, ROD, GAP, signaling protein; 1.94A {Bos taurus} SCOP: a.91.1.1 PDB: 1fqj_B* 1fqk_B* Back     alignment and structure
>2a72_A Regulator of G-protein signalling 7; human RGS7, regulator of G-protein signaling 7, GTPase-activ proteins (GAP), structural genomics; 2.00A {Homo sapiens} PDB: 2d9j_A 2es0_A Back     alignment and structure
>2cso_A Pleckstrin; DEP domain, platelet P47 protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.4.5.31 Back     alignment and structure
>2af0_A Regulator of G-protein signaling 2; helix, structural genomics, structural genomics consortium, SGC, signaling protein; 2.30A {Homo sapiens} PDB: 2v4z_B* Back     alignment and structure
>2dlv_A RGS18, regulator of G-protein signaling 18; RGS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>2ihd_A RGS8, regulator of G-protein signaling 8; signaling protein, structural genomics, structura genomics consortium, SGC, signaling protein; 1.70A {Homo sapiens} PDB: 2ode_B* 2bt2_A Back     alignment and structure
>1cmz_A Protein (GAIP (G-alpha interacting) protein); RGS, regulator of G protein, signaling protein regulation; NMR {Homo sapiens} SCOP: a.91.1.1 Back     alignment and structure
>1zv4_X RGS17, regulator of G-protein signaling 17; human RGSZ2, human RGS17(Z2), regulator of G-protein signali opioid receptor interacting protein; 2.40A {Homo sapiens} Back     alignment and structure
>2crp_A RGS5, regulator of G-protein signaling 5; RGS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>1dk8_A Axin; alpha-helix, PI-helix, signaling protein; HET: SO4; 1.57A {Homo sapiens} SCOP: a.91.1.1 PDB: 1emu_A Back     alignment and structure
>2jm5_A RGS18, regulator of G-protein signaling 18; signaling protein, structural genomics, structural genomics consortium, SGC; NMR {Homo sapiens} SCOP: a.91.1.1 PDB: 2owi_A Back     alignment and structure
>3c7l_A Regulator of G-protein signaling 16; RGS, RGS16, GAP, GTPase activating protein, heterotrimeric G-protein, lipoprotein, palmitate, phosphoprotein; 1.89A {Mus musculus} PDB: 3c7k_B* 2ik8_B* Back     alignment and structure
>2dlr_A RGS10, regulator of G-protein signaling 10; RGS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>2oj4_A RGS3, regulator of G-protein signaling 3, RGP3; RGS domain, signaling protein inhibitor; 2.30A {Homo sapiens} Back     alignment and structure
>2bv1_A Regulator of G-protein signalling 1; RGS1, RGS, structural genomics, struct genomics consortium, B-cell activation, phosphorylation; 2.0A {Homo sapiens} PDB: 2gtp_C* Back     alignment and structure
>2ihb_B Regulator of G-protein signalling 10, guanine nucleotide-binding protein G(K) subunit A; RGS, heterotrimeric G protein, signall complex; HET: GDP; 2.71A {Homo sapiens} PDB: 2i59_A Back     alignment and structure
>2ebz_A RGS12, regulator of G-protein signaling 12; RGS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>1uhw_A Pleckstrin; three-helix bundle, beta-ARM, riken structural genomics/proteomics initiative, RSGI, structural genomics, signaling protein; NMR {Mus musculus} SCOP: a.4.5.31 PDB: 1w4m_A Back     alignment and structure
>1agr_E RGS4; GI-alpha-1, hydrolase, signal transduction, complex (signal transduction/regulator), GTP-binding, GTPase activating protein; HET: GDP CIT; 2.80A {Rattus norvegicus} SCOP: a.91.1.1 PDB: 1ezt_A 1ezy_A Back     alignment and structure
>1v3f_A Pleckstrin 2; three-helix bundle, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: a.4.5.31 Back     alignment and structure
>1fsh_A Dishevelled-1; three-helix bundle, beta-ARM, signaling protein; NMR {Mus musculus} SCOP: a.4.5.31 Back     alignment and structure
>2ysr_A DEP domain-containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>1got_G GT-gamma; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: a.137.3.1 PDB: 1tbg_E 2trc_G 1b9y_B 1b9x_B 1a0r_G* Back     alignment and structure
>3ml6_A Chimeric complex between protein dishevlled2 HOMO and clathrin adaptor AP-2 complex...; dishevelled, frizzled internalization; 3.50A {Mus musculus} Back     alignment and structure
>3v5w_G G gamma-I, guanine nucleotide-binding protein G(I)/G(S)/G(O) gamma-2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Bos taurus} PDB: 1xhm_B 3pvu_G* 3cik_G 3krw_G* 3krx_G* 3psc_G 1omw_G* 3pvw_G* 3uzs_G 1gp2_G* 1gg2_G* 2bcj_G* 3ah8_G* 2qns_B 3kj5_B 3sn6_G* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 302
d1agre_128 a.91.1.1 (E:) Regulator of G-protein signaling 4, 4e-14
d1fqia_138 a.91.1.1 (A:) RGS9, RGS domain {Cow (Bos taurus) [ 1e-13
d2jm5a1132 a.91.1.1 (A:3-134) Regulator of G-protein signalin 2e-13
d1dk8a_147 a.91.1.1 (A:) Axin RGS-homologous domain {Human (H 2e-12
d1cmza_128 a.91.1.1 (A:) Galpha interacting protein, GaIP {Hu 4e-12
d2ik8b1116 a.91.1.1 (B:65-180) Regulator of G-protein signali 9e-09
d1htjf_ 182 a.91.1.1 (F:) Pdz-RhoGEF RGS-like domain {Human (H 4e-08
d1omwa1157 a.91.1.1 (A:29-185) G-protein coupled receptor kin 3e-07
d2csoa1115 a.4.5.31 (A:8-122) Pleckstrin {Human (Homo sapiens 3e-06
d1gg2g_54 a.137.3.1 (G:) Transducin (heterotrimeric G protei 3e-04
d1v3fa_120 a.4.5.31 (A:) Pleckstrin 2 {Mouse (Mus musculus) [ 8e-04
d1o7fa1142 a.4.5.31 (A:180-321) Regulatory domain of epac2, d 0.003
>d1agre_ a.91.1.1 (E:) Regulator of G-protein signaling 4, RGS4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 128 Back     information, alignment and structure

class: All alpha proteins
fold: Regulator of G-protein signaling, RGS
superfamily: Regulator of G-protein signaling, RGS
family: Regulator of G-protein signaling, RGS
domain: Regulator of G-protein signaling 4, RGS4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 65.8 bits (160), Expect = 4e-14
 Identities = 19/48 (39%), Positives = 28/48 (58%)

Query: 254 ISARRIKRWAFSLQELLKDPLGRDHFTKFLDKEFSGENLKFWEAVQEY 301
           +S   +K+WA SL+ L+    G   F  FL  E+S EN+ FW + +EY
Sbjct: 1   VSQEEVKKWAESLENLINHECGLAAFKAFLKSEYSEENIDFWISCEEY 48
>d1fqia_ a.91.1.1 (A:) RGS9, RGS domain {Cow (Bos taurus) [TaxId: 9913]} Length = 138 Back     information, alignment and structure
>d2jm5a1 a.91.1.1 (A:3-134) Regulator of G-protein signaling 18, RGS18 {Human (Homo sapiens) [TaxId: 9606]} Length = 132 Back     information, alignment and structure
>d1dk8a_ a.91.1.1 (A:) Axin RGS-homologous domain {Human (Homo sapiens) [TaxId: 9606]} Length = 147 Back     information, alignment and structure
>d1cmza_ a.91.1.1 (A:) Galpha interacting protein, GaIP {Human (Homo sapiens) [TaxId: 9606]} Length = 128 Back     information, alignment and structure
>d2ik8b1 a.91.1.1 (B:65-180) Regulator of G-protein signaling 16, RGS16 {Human (Homo sapiens) [TaxId: 9606]} Length = 116 Back     information, alignment and structure
>d1htjf_ a.91.1.1 (F:) Pdz-RhoGEF RGS-like domain {Human (Homo sapiens) [TaxId: 9606]} Length = 182 Back     information, alignment and structure
>d1omwa1 a.91.1.1 (A:29-185) G-protein coupled receptor kinase 2, N-terminal domain {Cow (Bos taurus) [TaxId: 9913]} Length = 157 Back     information, alignment and structure
>d2csoa1 a.4.5.31 (A:8-122) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} Length = 115 Back     information, alignment and structure
>d1gg2g_ a.137.3.1 (G:) Transducin (heterotrimeric G protein), gamma chain {Cow (Bos taurus) [TaxId: 9913]} Length = 54 Back     information, alignment and structure
>d1v3fa_ a.4.5.31 (A:) Pleckstrin 2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 120 Back     information, alignment and structure
>d1o7fa1 a.4.5.31 (A:180-321) Regulatory domain of epac2, domain 2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 142 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query302
d1fqia_138 RGS9, RGS domain {Cow (Bos taurus) [TaxId: 9913]} 99.41
d1cmza_128 Galpha interacting protein, GaIP {Human (Homo sapi 99.33
d1agre_128 Regulator of G-protein signaling 4, RGS4 {Rat (Rat 99.27
d1dk8a_147 Axin RGS-homologous domain {Human (Homo sapiens) [ 99.22
d2jm5a1132 Regulator of G-protein signaling 18, RGS18 {Human 99.15
d2csoa1115 Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} 99.15
d1omwa1157 G-protein coupled receptor kinase 2, N-terminal do 99.05
d1gg2g_54 Transducin (heterotrimeric G protein), gamma chain 98.85
d1v3fa_120 Pleckstrin 2 {Mouse (Mus musculus) [TaxId: 10090]} 98.74
d1fsha_94 Segment polarity protein Dishevelled-1 {Mouse (Mus 98.64
d1o7fa1142 Regulatory domain of epac2, domain 2 {Mouse (Mus m 98.48
d1tbge_68 Transducin (heterotrimeric G protein), gamma chain 96.71
>d1fqia_ a.91.1.1 (A:) RGS9, RGS domain {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
class: All alpha proteins
fold: Regulator of G-protein signaling, RGS
superfamily: Regulator of G-protein signaling, RGS
family: Regulator of G-protein signaling, RGS
domain: RGS9, RGS domain
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.41  E-value=2.1e-14  Score=116.65  Aligned_cols=52  Identities=50%  Similarity=0.982  Sum_probs=50.1

Q ss_pred             cCCCCHHHHhHHHHHHHHHhCCcccHHHHHHhhhhcCCchhhHHHHhhcccC
Q psy10896        251 AKEISARRIKRWAFSLQELLKDPLGRDHFTKFLDKEFSGENLKFWEAVQEYT  302 (302)
Q Consensus       251 ~~~pt~~~v~rWa~Sfe~LL~dp~G~~~F~~FLkkEfSeENL~FWlAcE~~K  302 (302)
                      +..||..||.+|+.||+++|.||.|+..|++||++++++|||.||++||+||
T Consensus         3 ~~~p~~~r~~~w~~sl~~IL~d~~~~~~F~~FL~~~~~~e~l~Fw~~ve~~k   54 (138)
T d1fqia_           3 VDIPTKMRVERWAFNFSELIRDPKGRQSFQHFLRKEFSGENLGFWEACEDLK   54 (138)
T ss_dssp             CCCCCHHHHHHTTTCHHHHHTSHHHHHHHHHHHHHTTCTHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHhCHHHHHcChHHHHHHHHHHhHcCCHHHHHHHHHHHHHH
Confidence            5689999999999999999999999999999999999999999999999875
>d1cmza_ a.91.1.1 (A:) Galpha interacting protein, GaIP {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1agre_ a.91.1.1 (E:) Regulator of G-protein signaling 4, RGS4 {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1dk8a_ a.91.1.1 (A:) Axin RGS-homologous domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2jm5a1 a.91.1.1 (A:3-134) Regulator of G-protein signaling 18, RGS18 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2csoa1 a.4.5.31 (A:8-122) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1omwa1 a.91.1.1 (A:29-185) G-protein coupled receptor kinase 2, N-terminal domain {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1gg2g_ a.137.3.1 (G:) Transducin (heterotrimeric G protein), gamma chain {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1v3fa_ a.4.5.31 (A:) Pleckstrin 2 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1fsha_ a.4.5.31 (A:) Segment polarity protein Dishevelled-1 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1o7fa1 a.4.5.31 (A:180-321) Regulatory domain of epac2, domain 2 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1tbge_ a.137.3.1 (E:) Transducin (heterotrimeric G protein), gamma chain {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure