Psyllid ID: psy10916

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------
Protein Sequence
MGSIVAILGHLMRMRVYLKASIPTFQFGRGVKKELRSATATTAEMMGKINLRVMHGGQATLHSIRVLQPKQVRVDSQDDHDSTREFLWKRSSHIAHLVTEKLTSAARSLLQPIPSNTPHIPLPPPPSRYPVYEEDNE
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHHcccEEEEccHHHHHHHHHHcHHHHHcEEEEEEEEEccccEEEEEEEEcccEEEEcccccccHHHHHHHHcccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHEHcccccEEcccccHHEEEEccccHHHHccEEEEEEEccccEEEEEEEEEcccEEEEEccccccccHHHHEcccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccEEccccc
Coil and Loop (DISEMBL)
MGSIVAILGHLMRMRVYLKasiptfqfgrGVKKELRSATATTAEMMGKINLRVMHGGQATLHSIrvlqpkqvrvdsqddhdstrEFLWKRSSHIAHLVTEKLTSAARSllqpipsntphiplppppsrypvyeedne
Flexible Loop (DISEMBL)
MGSIVAILGHLMRMRVYLKAsiptfqfgrgvKKELRSATATTAEMMGKINLRVMHGGQATLHSirvlqpkqvrvdsqddHDSTREFLWKRSSHIAHLVTEKLTSAARSLLQPipsntphiplppppsrypvyeeDNE
Low Complexity Region (SEG)
MGSIVAILGHLMRMRVYLKASIPTFQFGRGVKKELRSATATTAEMMGKINLRVMHGGQATLHSIRVLQPKQVRVDSQDDHDSTREFLWKRSSHIAHLVTEKLTSAARSLLQpipsntphiplppppsrypVYEEDNE
Disordered region (IsUnstruct)
***IVAILGHLMRMRVYLKASIPTFQFGRGVKKELRSATATTAEMMGKINLRVMHGGQATLHSIRVLQ****************EFLWKRSSHIAHLVTEK************************************
Disordered Region (DISOPRED)
**SIVAILGHLMRMRVYLKASIPTFQFGRG*************EMMGKINLRVMHGGQATLHSIRVLQP*************TREFLWKRSSHIAHLVTEKL***************PHIPLPPPPSR*********
Disordered Region (DISEMBL)
MGSIVAILGHLMRMRVYLKASIPTFQFGRGVKKELRSATATTAEMMGKINLRVMHGGQATLHSIRVLQPKQ***********TREFLWKRSSHIAHLVTEKLTSAARSLLQPIPSNTPHIPLPPPPSRYPVYEEDNE
Disordered Region (DISPRO)
*GSIVAILGHLMRMRVYLKASIPTFQFGRGVKKELRSATATTAEMMGKINLRVMHGGQATLHSIRVLQPKQVRVDSQDDHDSTREFLWKRSSHIAHLVTEKLTSAARSLLQPIPSNTPHIPLPPPPSRYPVY*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGSIVAILGHLMRMRVYLKASIPTFQFGRGVKKELRSATATTAEMMGKINLRVMHGGQATLHSIRVLQPKQVRVDSQDDHDSTREFLWKRSSHIAHLVTEKLTSAARSLLQPIPSNTPHIPLPPPPSRYPVYEEDNE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	137
332030223	584	Replicase polyprotein 1a [Acromyrmex ech	0.649	0.152	0.797	4e-36
307184433	489	hypothetical protein EAG_02515 [Camponot	0.656	0.184	0.788	6e-36
328793269	567	PREDICTED: hypothetical protein LOC72717	0.649	0.156	0.786	1e-35
340721511	557	PREDICTED: hypothetical protein LOC10064	0.649	0.159	0.786	4e-35
380029041	117	PREDICTED: uncharacterized protein LOC10	0.649	0.760	0.786	2e-34
383855858	566	PREDICTED: uncharacterized protein LOC10	0.656	0.159	0.755	7e-34
345493305	627	PREDICTED: hypothetical protein LOC10012	0.649	0.141	0.730	7e-33
307197880	876	Methylglutaconyl-CoA hydratase, mitochon	0.627	0.098	0.767	1e-32
242017339	559	conserved hypothetical protein [Pediculu	0.620	0.152	0.717	2e-31
91088917	552	PREDICTED: similar to ectodermal CG6611-	0.656	0.163	0.666	3e-30

>gi|332030223|gb|EGI70006.1| Replicase polyprotein 1a [Acromyrmex echinatior]

 Score =  155 bits (393), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 71/89 (79%), Positives = 82/89 (92%)

Query: 26  QFGRGVKKELRSATATTAEMMGKINLRVMHGGQATLHSIRVLQPKQVRVDSQDDHDSTRE 85
           +FGR  KKELRSATATTAEM GK++LRV+HGG ATLHSIRVLQPKQVRV+SQDDHD TRE
Sbjct: 491 EFGRAAKKELRSATATTAEMSGKLSLRVLHGGAATLHSIRVLQPKQVRVESQDDHDRTRE 550

Query: 86  FLWKRSSHIAHLVTEKLTSAARSLLQPIP 114
           F+WKRSSHIAHLV++KL+SA RS+L+P P
Sbjct: 551 FVWKRSSHIAHLVSQKLSSATRSMLRPPP 579

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307184433|gb|EFN70842.1| hypothetical protein EAG_02515 [Camponotus floridanus]

 Score =  155 bits (391), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 71/90 (78%), Positives = 83/90 (92%)

Query: 26  QFGRGVKKELRSATATTAEMMGKINLRVMHGGQATLHSIRVLQPKQVRVDSQDDHDSTRE 85
           +FGR  KKELRSATATTAEM GK++LRV+HGG ATLHSIRVLQPKQVRV+SQDDHD TRE
Sbjct: 399 EFGRAAKKELRSATATTAEMSGKLSLRVLHGGAATLHSIRVLQPKQVRVESQDDHDRTRE 458

Query: 86  FLWKRSSHIAHLVTEKLTSAARSLLQPIPS 115
           F+WKRSSHIAHLV++KL+SA RS+L+P P+
Sbjct: 459 FVWKRSSHIAHLVSQKLSSATRSMLRPPPA 488

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328793269|ref|XP_003251856.1| PREDICTED: hypothetical protein LOC727170 [Apis mellifera]

 Score =  154 bits (389), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 70/89 (78%), Positives = 81/89 (91%)

Query: 26  QFGRGVKKELRSATATTAEMMGKINLRVMHGGQATLHSIRVLQPKQVRVDSQDDHDSTRE 85
           +FGR  KKELRSATATTAEM GK++LR++HGG ATL+SIRVLQPKQVRV+S DDHD TRE
Sbjct: 474 EFGRAAKKELRSATATTAEMSGKLSLRILHGGAATLNSIRVLQPKQVRVESADDHDRTRE 533

Query: 86  FLWKRSSHIAHLVTEKLTSAARSLLQPIP 114
           F+WKRSSHIAHLV+EKL+SA RS+LQP P
Sbjct: 534 FVWKRSSHIAHLVSEKLSSATRSMLQPPP 562

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340721511|ref|XP_003399163.1| PREDICTED: hypothetical protein LOC100645646 [Bombus terrestris]

 Score =  152 bits (385), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 70/89 (78%), Positives = 81/89 (91%)

Query: 26  QFGRGVKKELRSATATTAEMMGKINLRVMHGGQATLHSIRVLQPKQVRVDSQDDHDSTRE 85
           +FGR  KKELRSATATTAEM GK++LRV+HGG ATL+SIRVLQPKQVRV+S DDHD TRE
Sbjct: 463 EFGRAAKKELRSATATTAEMSGKLSLRVLHGGAATLNSIRVLQPKQVRVESADDHDRTRE 522

Query: 86  FLWKRSSHIAHLVTEKLTSAARSLLQPIP 114
           F+WKRSSHIAHLV+EKL+SA RS+L+P P
Sbjct: 523 FVWKRSSHIAHLVSEKLSSATRSMLRPPP 551

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380029041|ref|XP_003698191.1| PREDICTED: uncharacterized protein LOC100868183 [Apis florea]

 Score =  150 bits (379), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 70/89 (78%), Positives = 81/89 (91%)

Query: 26  QFGRGVKKELRSATATTAEMMGKINLRVMHGGQATLHSIRVLQPKQVRVDSQDDHDSTRE 85
           +FGR  KKELRSATATTAEM GK++LR++HGG ATL+SIRVLQPKQVRV+S DDHD TRE
Sbjct: 24  EFGRAAKKELRSATATTAEMSGKLSLRILHGGAATLNSIRVLQPKQVRVESADDHDRTRE 83

Query: 86  FLWKRSSHIAHLVTEKLTSAARSLLQPIP 114
           F+WKRSSHIAHLV+EKL+SA RS+LQP P
Sbjct: 84  FVWKRSSHIAHLVSEKLSSATRSMLQPPP 112

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383855858|ref|XP_003703427.1| PREDICTED: uncharacterized protein LOC100877435 [Megachile rotundata]

 Score =  148 bits (373), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 68/90 (75%), Positives = 82/90 (91%)

Query: 26  QFGRGVKKELRSATATTAEMMGKINLRVMHGGQATLHSIRVLQPKQVRVDSQDDHDSTRE 85
           +FGR  KKELRSATATTAEM GK++LRV+HGG ATL+SIRVLQPKQVRV+S+DDHD TRE
Sbjct: 472 EFGRTAKKELRSATATTAEMSGKLSLRVLHGGVATLNSIRVLQPKQVRVESKDDHDRTRE 531

Query: 86  FLWKRSSHIAHLVTEKLTSAARSLLQPIPS 115
           F+WKRSSHIAHLV+EKL+ A +S+L+P P+
Sbjct: 532 FVWKRSSHIAHLVSEKLSLATKSMLRPPPA 561

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345493305|ref|XP_003427042.1| PREDICTED: hypothetical protein LOC100121893 [Nasonia vitripennis]

 Score =  145 bits (365), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 65/89 (73%), Positives = 80/89 (89%)

Query: 26  QFGRGVKKELRSATATTAEMMGKINLRVMHGGQATLHSIRVLQPKQVRVDSQDDHDSTRE 85
           +FGR  +KE+RSATATTAEM G+++LRV HGG ATLHSIRVLQPKQ+R++S DDHD TRE
Sbjct: 530 EFGRSTRKEVRSATATTAEMSGRLSLRVYHGGAATLHSIRVLQPKQMRIESADDHDRTRE 589

Query: 86  FLWKRSSHIAHLVTEKLTSAARSLLQPIP 114
           F+WKRSSHIAHLV++KL+SA RS+L+P P
Sbjct: 590 FVWKRSSHIAHLVSQKLSSATRSMLRPPP 618

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307197880|gb|EFN78979.1| Methylglutaconyl-CoA hydratase, mitochondrial [Harpegnathos saltator]

 Score =  144 bits (362), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 66/86 (76%), Positives = 77/86 (89%)

Query: 26  QFGRGVKKELRSATATTAEMMGKINLRVMHGGQATLHSIRVLQPKQVRVDSQDDHDSTRE 85
           +FGR  KKELRSATATTAEM GK++LRV+HGG ATLHSIRVLQPKQVRV+S DDHD TRE
Sbjct: 477 EFGRAAKKELRSATATTAEMSGKLSLRVLHGGAATLHSIRVLQPKQVRVESADDHDRTRE 536

Query: 86  FLWKRSSHIAHLVTEKLTSAARSLLQ 111
           F+W+RSSHIAHLV++KL+SA R + Q
Sbjct: 537 FVWRRSSHIAHLVSQKLSSATRKIHQ 562

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242017339|ref|XP_002429147.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212514020|gb|EEB16409.1| conserved hypothetical protein [Pediculus humanus corporis]

 Score =  140 bits (352), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 61/85 (71%), Positives = 76/85 (89%)

Query: 26  QFGRGVKKELRSATATTAEMMGKINLRVMHGGQATLHSIRVLQPKQVRVDSQDDHDSTRE 85
           +FGRGVKKE+RSATATT EM+GK+NLR+ HGG+A LHSIRV+QP  +R+D+ D+HD TRE
Sbjct: 455 EFGRGVKKEIRSATATTTEMVGKLNLRIQHGGEAKLHSIRVMQPNLLRIDAPDNHDKTRE 514

Query: 86  FLWKRSSHIAHLVTEKLTSAARSLL 110
           F+WKRSSHIA +V++KLT AARSLL
Sbjct: 515 FMWKRSSHIAQIVSQKLTKAARSLL 539

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91088917|ref|XP_973166.1| PREDICTED: similar to ectodermal CG6611-PA [Tribolium castaneum]

 Score =  136 bits (342), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 60/90 (66%), Positives = 79/90 (87%)

Query: 26  QFGRGVKKELRSATATTAEMMGKINLRVMHGGQATLHSIRVLQPKQVRVDSQDDHDSTRE 85
           +  +G K+E++SATATTAEM G++NLR++HGG ATLHSIRVLQPKQVRV+S DDHD T+E
Sbjct: 462 EMAKGAKREVKSATATTAEMHGRLNLRIVHGGAATLHSIRVLQPKQVRVESLDDHDKTKE 521

Query: 86  FLWKRSSHIAHLVTEKLTSAARSLLQPIPS 115
           F+W++S HIA LV++KL SAARS+L+P P+
Sbjct: 522 FMWRKSPHIASLVSQKLVSAARSMLKPPPA 551

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	137
FB|FBgn0000451	581	ect "ectodermal" [Drosophila m	0.598	0.141	0.554	1.1e-16

FB|FBgn0000451 ect "ectodermal" [Drosophila melanogaster (taxid:7227)]

 Score = 215 (80.7 bits), Expect = 1.1e-16, P = 1.1e-16
 Identities = 46/83 (55%), Positives = 60/83 (72%)

Query:    27 FGRGVKKELRSATATTAEMMGKINLRVMHGGQATLHSIRVLQPKQVRVDSQDDHDSTREF 86
             F +G  + ++SATA T EMMG+I   V+   +ATL SI+V QPKQV V+S+D+HD TREF
Sbjct:   489 FKKGSVRSVKSATARTNEMMGRIKFSVLDD-RATLMSIKVQQPKQVEVESKDNHDRTREF 547

Query:    87 LWKRSSHIAHLVTEKLTSAARSL 109
             +W+R+  IA LV EKL  AA SL
Sbjct:   548 VWRRTPKIAKLVNEKLKLAAESL 570


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.131   0.365    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      137       118   0.00091  102 3  11 22  0.44    30
                                                     29  0.47    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  531 (57 KB)
  Total size of DFA:  109 KB (2074 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.83u 0.15s 11.98t   Elapsed:  00:00:00
  Total cpu time:  11.83u 0.15s 11.98t   Elapsed:  00:00:00
  Start:  Thu Aug 15 14:04:33 2013   End:  Thu Aug 15 14:04:33 2013

GO:0005634 "nucleus" evidence=IDA

GO:0035295 "tube development" evidence=IEP

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00