Psyllid ID: psy10923

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520
MEHPPLTLKNILDTGLLSCAWVLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGVNVVRVLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGVKFDLRVWYVITNIDKFKIWVYHEGYVRFCSKPYSNILLDEARHLTNVRIQKQYRNVRDPPQLPAELMWDFKQLRDYFTKNMNLPRKWDMIMRAMEESIVTIMRCAQMWYVITNIDKFKIWVYHEGYVRFCSKPYSNILLDEARHLTNVRIQKQYRNVRDPPQLPADLGDYNFLNYISEMTDYVRRKRRMLDIGYTMDMSRRNILNMKVKEAVEKNMIFAILGYYPAVRHKLVNMGWVEKIDSKRTYTDFTLRKEFMLTNLDSAPYIIKNEKPEQVTSQYYEQKYMSDALAERKPDLLFALRKNYITWSALEPDTVVSYFPKCNFCSKLGLNICLESTPVFKNDSDSLKYPRGFNMSNEISMRRFVQNFRETSCFSLMRYVKHCFEKHKPVF
cccccHHHHHcccccccccEEEEccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHcccccEEEEccccccccccEEEEccHHHHHHHHccccccccccEEEEEcccccccccccccEEEEEEEEccccccEEEEEccccEEccccccccccccccEEccHHHHHHccccccccccccccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEcccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHcEEEEccccHHHHHHHHHccccccccccccccccccHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHccccccEEEcccccccccccccccEEccccccccccHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc
ccccccccHHHHHHHHccccHHccccHHHcccHHHHHHHHHHHHHHcccccccccccEEEccHHHHHHHHccccccEEEcccccccccEEEEEccHHHHHHHcccccccccccEEEEEEEcccEEEcccEEEEEEEEEEEccccEEEEEEcccEEEEEEEEccccccccEEEEEccHHcccccccccccccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHccccccccEEEEEEcccccccccHHHHHccccccHHcHHHHHHcccccccccccHHHHHHHcccccccHHHHHHHHHHHHHHHHHccEEEEEcccHHHHHHHHHcccEEEcccccccccccccccccccccccccccccccHHHHHHHHccHHHHHHHHHHcccccEEEEcccccEccccccccHHHHHHccccccccccEEHccccccccccccHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc
mehppltlknildTGLLSCAWVlkpvancsghgirIYRQLEDIKRAIGtlknltcprcvvqkyiekpllihgvNVVRVLKPvancsghgirIYRQLEDIKRAIGtlknltcprcvvqkyiekpllihgvkFDLRVWYVITNIDKFKIWVYHEGyvrfcskpysnillDEARHLTNVRIQKqyrnvrdppqlpaeLMWDFKQLRDYFTknmnlprkWDMIMRAMEESIVTIMRCAQMWYVITNIDKFKIWVYHEGyvrfcskpysnillDEARHLTNVRIQKqyrnvrdppqlpadlgdynfLNYISEMTDYVRRKRRMLdigytmdmsRRNILNMKVKEAVEKNMIFAILGYYPAVRHKLVNMgwvekidskrtytdfTLRKEFmltnldsapyiiknekpeqvtSQYYEQKYMSDALAERKPDLLFALRKNYItwsalepdtvvsyfpkcnfcsklglniclestpvfkndsdslkyprgfnmsNEISMRRFVQNFRETSCFSLMRYVKHCfekhkpvf
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
MEHPPLTLKNILDTGLLSCAWVLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGVNVVRVLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGVKFDLRVWYVITNIDKFKIWVYHEGYVRFCSKPYSNILLDEARHLTNVRIQKQYRNVRDPPQLPAELMWDFKQLRDYFTKNMNLPRKWDMIMRAMEESIVTIMRCAQMWYVITNIDKFKIWVYHEGYVRFCSKPYSNILLDEARHLTNVRIQKQYRNVRDPPQLPADLGDYNFLNYISEMTDYVRRKRRMLDIGYTMDMSRRNILNMKVKEAVEKNMIFAILGYYPAVRHKLVNMGWVEKIDSKRTYTDFTLRKEFMLTNLDSAPYIIKNEKPEQVTSQYYEQKYMSDALAERKPDLLFALRKNYITWSALEPDTVVSYFPKCNFCSKLGLNICLESTPVFKNDSDSLKYPRGFNMSNEISMRRFVQNFRETSCFSLMRYVKHCFEKHKPVF
******TLKNILDTGLLSCAWVLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGVNVVRVLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGVKFDLRVWYVITNIDKFKIWVYHEGYVRFCSKPYSNILLDEARHLTNVRIQKQYRNVRDPPQLPAELMWDFKQLRDYFTKNMNLPRKWDMIMRAMEESIVTIMRCAQMWYVITNIDKFKIWVYHEGYVRFCSKPYSNILLDEARHLTNVRIQKQYRNVRDPPQLPADLGDYNFLNYISEMTDYVRRKRRMLDIGYTMDMSRRNILNMKVKEAVEKNMIFAILGYYPAVRHKLVNMGWVEKIDSKRTYTDFTLRKEFMLTNLDSAPYIIKNEK**QVTSQYYEQKYMSDALAERKPDLLFALRKNYITWSALEPDTVVSYFPKCNFCSKLGLNICLESTPVFKNDSDSLKYPRGFNMSNEISMRRFVQNFRETSCFSLMRYVKHCFE******
***PPLTLKNILDTGLLSCAWVLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGVNVVRVLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGVKFDLRVWYVITNIDKFKIWVYHEGYVRFCSKPYSNILLDEARHLTNVRIQKQY********LPAELMWDFKQLRDYFTKNMNLPRKWDMIMRAMEESIVTIMRCAQMWYVITNIDKFKIWVYHEGYVRFCSKPYSNILLDEARHLTNVRIQKQYRNVRDPPQLPADLGDYNFLNYISEMTDYVRRKRRMLDIGYTMDMSRRNILNMKVKEAVEKNMIFAILGYYPAVRHKLVNMGWVEKIDS***********************IIKN*KPEQVTSQYYEQKYMSDALAERKPDLLFALRKNYITWSALEPDTVVSYFPKCNFCSKLGLNICLESTPVFKNDSDSLKYPRGFNMSNEISMRRFVQNFRETSCFSLMRYVKHCF*******
MEHPPLTLKNILDTGLLSCAWVLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGVNVVRVLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGVKFDLRVWYVITNIDKFKIWVYHEGYVRFCSKPYSNILLDEARHLTNVRIQKQYRNVRDPPQLPAELMWDFKQLRDYFTKNMNLPRKWDMIMRAMEESIVTIMRCAQMWYVITNIDKFKIWVYHEGYVRFCSKPYSNILLDEARHLTNVRIQKQYRNVRDPPQLPADLGDYNFLNYISEMTDYVRRKRRMLDIGYTMDMSRRNILNMKVKEAVEKNMIFAILGYYPAVRHKLVNMGWVEKIDSKRTYTDFTLRKEFMLTNLDSAPYIIKNEKPEQVTSQYYEQKYMSDALAERKPDLLFALRKNYITWSALEPDTVVSYFPKCNFCSKLGLNICLESTPVFKNDSDSLKYPRGFNMSNEISMRRFVQNFRETSCFSLMRYVKHCFEKHKPVF
***PPLTLKNILDTGLLSCAWVLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGVNVVRVLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGVKFDLRVWYVITNIDKFKIWVYHEGYVRFCSKPYSNILLDEARHLTNVRIQKQYRNVRDPPQLPAELMWDFKQLRDYFTKNMNLPRKWDMIMRAMEESIVTIMRCAQMWYVITNIDKFKIWVYHEGYVRFCSKPYSNILLDEARHLTNVRIQKQYRNVRDPPQLPADLGDYNFLNYISEMTDYVRRKRRMLDIGYTMDMSRRNILNMKVKEAVEKNMIFAILGYYPAVRHKLVNMGWVEKIDSKRTYTDFTLR******************KPEQVTSQYYEQKYMSDALAERKPDLLFALRKNYITWSALEPDTVVSYFPKCNFCSKLGLNICLESTPVFKNDSDSLKYPRGFNMSNEISMRRFVQNFRETSCFSLMRYVKHCFEK*****
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MEHPPLTLKNILDTGLLSCAWVLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGVNVVRVLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGVKFDLRVWYVITNIDKFKIWVYHEGYVRFCSKPYSNILLDEARHLTNVRIQKQYRNVRDPPQLPAELMWDFKQLRDYFTKNMNLPRKWDMIMRAMEESIVTIMRCAQMWYVITNIDKFKIWVYHEGYVRFCSKPYSNILLDEARHLTNVRIQKQYRNVRDPPQLPADLGDYNFLNYISEMTDYVRRKRRMLDIGYTMDMSRRNILNMKVKEAVEKNMIFAILGYYPAVRHKLVNMGWVEKIDSKRTYTDFTLRKEFMLTNLDSAPYIIKNEKPEQVTSQYYEQKYMSDALAERKPDLLFALRKNYITWSALEPDTVVSYFPKCNFCSKLGLNICLESTPVFKNDSDSLKYPRGFNMSNEISMRRFVQNFRETSCFSLMRYVKHCFEKHKPVF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query520 2.2.26 [Sep-21-2011]
Q1ECV4771 Tubulin monoglycylase TTL yes N/A 0.309 0.208 0.349 2e-24
Q9VM91 992 Tubulin glycylase 3A OS=D yes N/A 0.303 0.159 0.375 5e-22
Q9Y4R7772 Tubulin monoglycylase TTL no N/A 0.317 0.213 0.331 5e-21
A4Q9F1832 Protein monoglycylase TTL yes N/A 0.319 0.199 0.333 4e-20
A4Q9E5927 Tubulin monoglycylase TTL no N/A 0.309 0.173 0.305 3e-19
A6PVC2850 Protein monoglycylase TTL no N/A 0.319 0.195 0.345 1e-18
Q9VM92756 Tubulin glycylase 3B OS=D no N/A 0.292 0.201 0.354 4e-17
A6NNM8 815 Tubulin polyglutamylase T no N/A 0.194 0.123 0.417 8e-14
A4Q9E8 822 Tubulin polyglutamylase T no N/A 0.196 0.124 0.382 1e-13
Q8N841 843 Tubulin polyglutamylase T no N/A 0.196 0.120 0.382 2e-13
>sp|Q1ECV4|TTLL3_DANRE Tubulin monoglycylase TTLL3 OS=Danio rerio GN=ttll3 PE=2 SV=1 Back     alignment and function desciption
 Score =  114 bits (284), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 94/169 (55%), Gaps = 8/169 (4%)

Query: 72  GVNVVRVLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTC----PRCVVQKYIEKPLLIH 127
           G+  + ++KP A   G GI    +L+D+   +G +    C     + VVQKYIE+PLL+H
Sbjct: 331 GICNIWIIKPGAKSRGRGIMCMNKLDDM---LGLVDGDHCIMKDSKWVVQKYIERPLLVH 387

Query: 128 GVKFDLRVWYVITNIDKFKIWVYHEGYVRFCSKPYSNILLDEARHLTNVRIQKQYRNVRD 187
             KFD+R W+++T+ +   +W Y E Y+RF ++PYS   LD + HL N  IQK Y+   D
Sbjct: 388 DTKFDVRQWFLVTDWNPLTVWFYRECYLRFSTQPYSTHTLDSSVHLCNNSIQKHYQPSPD 447

Query: 188 -PPQLPAELMWDFKQLRDYFTKNMNLPRKWDMIMRAMEESIVTIMRCAQ 235
             P LPAE MW   Q R +   +        +++  M+++++  +  AQ
Sbjct: 448 RSPSLPAECMWSCSQFRSWLAASGRAALWKAVVVPGMQKAVIQTLLTAQ 496
Monoglycylase which modifies alpha- and beta-tubulin, generating side chains of glycine on the gamma-carboxyl groups of specific glutamate residues within the C-terminal tail of alpha-and beta-tubulin. Involved in the side-chain initiation step of the glycylation reaction by adding a single glycine chain to generate monoglycine side chains. Not involved in elongation step of the polyglycylation reaction.
Danio rerio (taxid: 7955)
EC: 6EC: .EC: 3EC: .EC: 2EC: .EC: -
>sp|Q9VM91|TTL3A_DROME Tubulin glycylase 3A OS=Drosophila melanogaster GN=TTLL3A PE=1 SV=1 Back     alignment and function description
>sp|Q9Y4R7|TTLL3_HUMAN Tubulin monoglycylase TTLL3 OS=Homo sapiens GN=TTLL3 PE=1 SV=2 Back     alignment and function description
>sp|A4Q9F1|TTLL8_MOUSE Protein monoglycylase TTLL8 OS=Mus musculus GN=Ttll8 PE=1 SV=1 Back     alignment and function description
>sp|A4Q9E5|TTLL3_MOUSE Tubulin monoglycylase TTLL3 OS=Mus musculus GN=Ttll3 PE=1 SV=1 Back     alignment and function description
>sp|A6PVC2|TTLL8_HUMAN Protein monoglycylase TTLL8 OS=Homo sapiens GN=TTLL8 PE=2 SV=4 Back     alignment and function description
>sp|Q9VM92|TTL3B_DROME Tubulin glycylase 3B OS=Drosophila melanogaster GN=TTLL3B PE=1 SV=2 Back     alignment and function description
>sp|A6NNM8|TTL13_HUMAN Tubulin polyglutamylase TTLL13 OS=Homo sapiens GN=TTLL13 PE=2 SV=2 Back     alignment and function description
>sp|A4Q9E8|TTLL6_MOUSE Tubulin polyglutamylase TTLL6 OS=Mus musculus GN=Ttll6 PE=2 SV=1 Back     alignment and function description
>sp|Q8N841|TTLL6_HUMAN Tubulin polyglutamylase TTLL6 OS=Homo sapiens GN=TTLL6 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query520
328715316459 PREDICTED: tubulin glycylase 3A-like [Ac 0.311 0.352 0.433 2e-33
328710058 757 PREDICTED: tubulin glycylase 3A-like iso 0.305 0.210 0.426 2e-32
328710060 641 PREDICTED: tubulin glycylase 3A-like iso 0.305 0.248 0.426 2e-32
328704501 679 PREDICTED: tubulin glycylase 3A-like iso 0.311 0.238 0.409 5e-31
328724069 690 PREDICTED: tubulin glycylase 3A-like [Ac 0.334 0.252 0.381 3e-24
260814151568 hypothetical protein BRAFLDRAFT_279174 [ 0.351 0.322 0.336 5e-24
348507651580 PREDICTED: tubulin monoglycylase TTLL3-l 0.315 0.282 0.355 7e-24
410919445 675 PREDICTED: LOW QUALITY PROTEIN: tubulin 0.321 0.247 0.374 7e-24
156393597575 predicted protein [Nematostella vectensi 0.315 0.285 0.390 3e-23
345489608 973 PREDICTED: tubulin glycylase 3A-like [Na 0.321 0.171 0.364 3e-23
>gi|328715316|ref|XP_003245593.1| PREDICTED: tubulin glycylase 3A-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 72/166 (43%), Positives = 111/166 (66%), Gaps = 4/166 (2%)

Query: 70  IHGVNVVRVLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGV 129
           I G+    ++KP +NCSGHGI + R L  IKR I T+ ++    C++QKYIE+PLLI+  
Sbjct: 138 IDGITNTWIIKPTSNCSGHGIMLSRDLHTIKRKI-TVADVFRKSCILQKYIERPLLIYTC 196

Query: 130 KFDLRVWYVITNIDKFKIWVYHEGYVRFCSKPYSNILLDEARHLTNVRIQKQYRNVRDPP 189
           K DLR W+++TN+    +W+Y EGYVRFC+  +S   +DE+ HL+NVR+Q +YR +R+ P
Sbjct: 197 KIDLRQWFLVTNMSPVVVWMYKEGYVRFCANSFSMKKMDESIHLSNVRLQTKYRKIRN-P 255

Query: 190 QLPAELMWDFKQLRDYFTKNMNLPRKWD-MIMRAMEESIVTIMRCA 234
           Q+P E MW++ +L+D+  K +     WD +I   M ES+  +++ A
Sbjct: 256 QVPEECMWNYSELQDHLRK-IGQEYVWDELIFPGMCESVYVVLQAA 300

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|328710058|ref|XP_003244150.1| PREDICTED: tubulin glycylase 3A-like isoform 1 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|328710060|ref|XP_003244151.1| PREDICTED: tubulin glycylase 3A-like isoform 2 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|328704501|ref|XP_003242510.1| PREDICTED: tubulin glycylase 3A-like isoform 1 [Acyrthosiphon pisum] gi|328704503|ref|XP_003242511.1| PREDICTED: tubulin glycylase 3A-like isoform 2 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|328724069|ref|XP_003248022.1| PREDICTED: tubulin glycylase 3A-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|260814151|ref|XP_002601779.1| hypothetical protein BRAFLDRAFT_279174 [Branchiostoma floridae] gi|229287081|gb|EEN57791.1| hypothetical protein BRAFLDRAFT_279174 [Branchiostoma floridae] Back     alignment and taxonomy information
>gi|348507651|ref|XP_003441369.1| PREDICTED: tubulin monoglycylase TTLL3-like [Oreochromis niloticus] Back     alignment and taxonomy information
>gi|410919445|ref|XP_003973195.1| PREDICTED: LOW QUALITY PROTEIN: tubulin monoglycylase TTLL3-like [Takifugu rubripes] Back     alignment and taxonomy information
>gi|156393597|ref|XP_001636414.1| predicted protein [Nematostella vectensis] gi|156223517|gb|EDO44351.1| predicted protein [Nematostella vectensis] Back     alignment and taxonomy information
>gi|345489608|ref|XP_001603622.2| PREDICTED: tubulin glycylase 3A-like [Nasonia vitripennis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query520
UNIPROTKB|C9JSD3326 TTLL3 "Tubulin monoglycylase T 0.317 0.506 0.331 3.8e-22
ZFIN|ZDB-GENE-060616-182789 ttll3 "tubulin tyrosine ligase 0.315 0.207 0.349 2.1e-21
FB|FBgn0031854 992 TTLL3A "Tubulin tyrosine ligas 0.309 0.162 0.364 6.8e-21
UNIPROTKB|F1MZ48261 TTLL3 "Uncharacterized protein 0.317 0.632 0.319 1.3e-20
UNIPROTKB|F1LT96260 F1LT96 "Uncharacterized protei 0.317 0.634 0.301 4.5e-20
UNIPROTKB|H3BLT7520 TTLL3 "Tubulin monoglycylase T 0.317 0.317 0.331 6.1e-20
UNIPROTKB|H0Y5E3619 TTLL3 "Tubulin monoglycylase T 0.317 0.266 0.331 9.9e-20
UNIPROTKB|Q9Y4R7772 TTLL3 "Tubulin monoglycylase T 0.317 0.213 0.331 1.6e-19
UNIPROTKB|J3KQB2915 TTLL3 "Tubulin monoglycylase T 0.317 0.180 0.331 2.1e-19
UNIPROTKB|E2QXM3752 E2QXM3 "Uncharacterized protei 0.317 0.219 0.331 5.1e-19
UNIPROTKB|C9JSD3 TTLL3 "Tubulin monoglycylase TTLL3" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
 Score = 264 (98.0 bits), Expect = 3.8e-22, P = 3.8e-22
 Identities = 56/169 (33%), Positives = 95/169 (56%)

Query:    70 IHGVNVVRVLKPVANCSGHGIRIYRQLEDIKRAI-GTLKNLTCPRCVVQKYIEKPLLIHG 128
             + G   + ++KP A   G GI     LE++ + + G    +   + VVQKYIE+PLLI G
Sbjct:    61 MEGDRNIWIVKPGAKSRGRGIMCMDHLEEMLKLVNGNPVVMKDGKWVVQKYIERPLLIFG 120

Query:   129 VKFDLRVWYVITNIDKFKIWVYHEGYVRFCSKPYSNILLDEARHLTNVRIQKQYRN-VRD 187
              KFDLR W+++T+ +   +W Y + Y+RF ++P+S   LD + HL N  IQK   N    
Sbjct:   121 TKFDLRQWFLVTDWNPLTVWFYRDSYIRFSTQPFSLKNLDNSVHLCNNSIQKHLENSCHR 180

Query:   188 PPQLPAELMWDFKQLRDYFTKNMNLPRKWD-MIMRAMEESIVTIMRCAQ 235
              P LP + MW  ++ + +  + M  P  W  +I+  M+++++  ++ +Q
Sbjct:   181 HPLLPPDNMWSSQRFQAHL-QEMGAPNAWSTIIVPGMKDAVIHALQTSQ 228
GO:0004835 "tubulin-tyrosine ligase activity" evidence=IEA
GO:0006464 "cellular protein modification process" evidence=IEA
ZFIN|ZDB-GENE-060616-182 ttll3 "tubulin tyrosine ligase-like family, member 3" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
FB|FBgn0031854 TTLL3A "Tubulin tyrosine ligase-like 3A" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|F1MZ48 TTLL3 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1LT96 F1LT96 "Uncharacterized protein" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|H3BLT7 TTLL3 "Tubulin monoglycylase TTLL3" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|H0Y5E3 TTLL3 "Tubulin monoglycylase TTLL3" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q9Y4R7 TTLL3 "Tubulin monoglycylase TTLL3" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|J3KQB2 TTLL3 "Tubulin monoglycylase TTLL3" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E2QXM3 E2QXM3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query520
pfam03133291 pfam03133, TTL, Tubulin-tyrosine ligase family 3e-32
pfam03133291 pfam03133, TTL, Tubulin-tyrosine ligase family 4e-09
>gnl|CDD|217380 pfam03133, TTL, Tubulin-tyrosine ligase family Back     alignment and domain information 
 Score =  124 bits (314), Expect = 3e-32
 Identities = 52/153 (33%), Positives = 79/153 (51%), Gaps = 10/153 (6%)

Query: 79  LKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGVKFDLRVWYV 138
           +KP A+  G GIRI   L  I + I +         VVQKYIE+PLLI G KFD+R++ +
Sbjct: 71  VKPSASARGRGIRITNDLSQILKQIQS------RPLVVQKYIERPLLIDGRKFDIRLYVL 124

Query: 139 ITNIDKFKIWVYHEGYVRFCSKPYSNI---LLDEARHLTNVRIQKQYRNVRDPPQLPAEL 195
           +T+++  +++VY EG +RF S  YS     L D   HLTN  IQK+  ++ +    P   
Sbjct: 125 VTSVNPLRVYVYREGLLRFASVKYSPSVSDLDDVEMHLTNYSIQKKSSSLNEDYNEPNGH 184

Query: 196 MWDFKQLRDYFTKNMNLPRKWDMIMRAMEESIV 228
            W       Y  +  +    W  I   + ++I+
Sbjct: 185 KWSLFNFWKY-LEEKDKEEIWLEIESIIIKTIL 216

Tubulins and microtubules are subjected to several post-translational modifications of which the reversible detyrosination/tyrosination of the carboxy-terminal end of most alpha-tubulins has been extensively analysed. This modification cycle involves a specific carboxypeptidase and the activity of the tubulin-tyrosine ligase (TTL). The true physiological function of TTL has so far not been established. Tubulin-tyrosine ligase (TTL) catalyzes the ATP-dependent post-translational addition of a tyrosine to the carboxy terminal end of detyrosinated alpha-tubulin. In normally cycling cells, the tyrosinated form of tubulin predominates. However, in breast cancer cells, the detyrosinated form frequently predominates, with a correlation to tumour aggressiveness. On the other hand, 3-nitrotyrosine has been shown to be incorporated, by TTL, into the carboxy terminal end of detyrosinated alpha-tubulin. This reaction is not reversible by the carboxypeptidase enzyme. Cells cultured in 3-nitrotyrosine rich medium showed evidence of altered microtubule structure and function, including altered cell morphology, epithelial barrier dysfunction, and apoptosis. Bacterial homologs of TTL are predicted to form peptide tags. Some of these are fused to a 2-oxoglutarate Fe(II)-dependent dioxygenase domain. Length = 291
>gnl|CDD|217380 pfam03133, TTL, Tubulin-tyrosine ligase family Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 520
KOG2156|consensus662 100.0
PF03133292 TTL: Tubulin-tyrosine ligase family; InterPro: IPR 100.0
KOG2157|consensus497 100.0
KOG2158|consensus565 100.0
KOG2155|consensus631 99.91
PF14398262 ATPgrasp_YheCD: YheC/D like ATP-grasp 99.68
PF08443190 RimK: RimK-like ATP-grasp domain; InterPro: IPR013 98.37
PRK10446300 ribosomal protein S6 modification protein; Provisi 98.1
TIGR00768277 rimK_fam alpha-L-glutamate ligases, RimK family. T 98.08
PF13535184 ATP-grasp_4: ATP-grasp domain; PDB: 3VMM_A 3LN6_A 98.04
COG0189318 RimK Glutathione synthase/Ribosomal protein S6 mod 98.03
PLN02941328 inositol-tetrakisphosphate 1-kinase 97.97
TIGR02144280 LysX_arch Lysine biosynthesis enzyme LysX. The fam 97.88
PF07478203 Dala_Dala_lig_C: D-ala D-ala ligase C-terminus; In 97.88
PRK01372304 ddl D-alanine--D-alanine ligase; Reviewed 97.87
TIGR02291317 rimK_rel_E_lig alpha-L-glutamate ligase-related pr 97.85
PRK14568343 vanB D-alanine--D-lactate ligase; Provisional 97.83
PF14397285 ATPgrasp_ST: Sugar-transfer associated ATP-grasp 97.82
PRK14569296 D-alanyl-alanine synthetase A; Provisional 97.78
PRK01966333 ddl D-alanyl-alanine synthetase A; Reviewed 97.74
PRK14571299 D-alanyl-alanine synthetase A; Provisional 97.73
TIGR01205315 D_ala_D_alaTIGR D-alanine--D-alanine ligase. but a 97.58
PRK14570364 D-alanyl-alanine synthetase A; Provisional 97.4
TIGR01161352 purK phosphoribosylaminoimidazole carboxylase, Pur 97.28
PF02655161 ATP-grasp_3: ATP-grasp domain; InterPro: IPR003806 97.24
TIGR03103547 trio_acet_GNAT GNAT-family acetyltransferase TIGR0 97.14
PRK13278358 purP 5-formaminoimidazole-4-carboxamide-1-(beta)-D 97.13
PRK14572347 D-alanyl-alanine synthetase A; Provisional 97.11
COG1181317 DdlA D-alanine-D-alanine ligase and related ATP-gr 97.09
PRK06019372 phosphoribosylaminoimidazole carboxylase ATPase su 96.91
KOG2157|consensus497 96.9
TIGR01142380 purT phosphoribosylglycinamide formyltransferase 2 96.74
PRK07206416 hypothetical protein; Provisional 96.71
PLN02257434 phosphoribosylamine--glycine ligase 96.66
PF02955173 GSH-S_ATP: Prokaryotic glutathione synthetase, ATP 96.62
TIGR00877423 purD phosphoribosylamine--glycine ligase. This enz 96.56
PRK06524493 biotin carboxylase-like protein; Validated 96.55
PRK13789426 phosphoribosylamine--glycine ligase; Provisional 96.52
PRK09288395 purT phosphoribosylglycinamide formyltransferase 2 96.46
PRK00885420 phosphoribosylamine--glycine ligase; Provisional 96.44
PRK08462445 biotin carboxylase; Validated 96.43
TIGR01235 1143 pyruv_carbox pyruvate carboxylase. This enzyme pla 96.42
PRK05246316 glutathione synthetase; Provisional 96.39
PRK13790379 phosphoribosylamine--glycine ligase; Provisional 96.34
PRK14016727 cyanophycin synthetase; Provisional 96.29
PRK13277366 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribo 96.28
TIGR00514449 accC acetyl-CoA carboxylase, biotin carboxylase su 96.25
PRK02186 887 argininosuccinate lyase; Provisional 96.17
TIGR01435737 glu_cys_lig_rel glutamate--cysteine ligase/gamma-g 96.16
PRK08463478 acetyl-CoA carboxylase subunit A; Validated 96.02
PRK052941066 carB carbamoyl phosphate synthase large subunit; R 95.98
PRK06111450 acetyl-CoA carboxylase biotin carboxylase subunit; 95.97
PRK12833467 acetyl-CoA carboxylase biotin carboxylase subunit; 95.74
PRK02471752 bifunctional glutamate--cysteine ligase/glutathion 95.6
PRK12999 1146 pyruvate carboxylase; Reviewed 95.55
TIGR02068 864 cya_phycin_syn cyanophycin synthetase. Cyanophycin 95.51
TIGR01380312 glut_syn glutathione synthetase, prokaryotic. This 95.5
PRK08591451 acetyl-CoA carboxylase biotin carboxylase subunit; 95.44
PRK05586447 biotin carboxylase; Validated 95.42
PRK12458338 glutathione synthetase; Provisional 95.42
PRK06849389 hypothetical protein; Provisional 95.41
PRK07178472 pyruvate carboxylase subunit A; Validated 95.3
PLN02948577 phosphoribosylaminoimidazole carboxylase 95.28
PRK14573809 bifunctional D-alanyl-alanine synthetase A/UDP-N-a 95.22
TIGR013691050 CPSaseII_lrg carbamoyl-phosphate synthase, large s 95.03
PRK06395435 phosphoribosylamine--glycine ligase; Provisional 95.01
TIGR01369 1050 CPSaseII_lrg carbamoyl-phosphate synthase, large s 94.34
PLN027351102 carbamoyl-phosphate synthase 94.03
PRK05294 1066 carB carbamoyl phosphate synthase large subunit; R 93.75
PRK12767326 carbamoyl phosphate synthase-like protein; Provisi 93.68
), forming GARS-AIRS-GART. This entry represents the A-domain of the enzyme, and is related to the ATP-grasp domain of biotin carboxylase/carbamoyl phosphate synthetase.; PDB: 1GSO_A 3LP8_A 2IP4_A 1VKZ_A 2QK4_A 2XD4_A 2XCL_A 3MJF_A 2YRW_A 2YS6_A ...." target="_blank" href="http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PF01071">PF01071194 GARS_A: Phosphoribosylglycinamide synthetase, ATP- 93.56
PLN02735 1102 carbamoyl-phosphate synthase 93.24
PF14403445 CP_ATPgrasp_2: Circularly permuted ATP-grasp type 93.05
PRK05784486 phosphoribosylamine--glycine ligase; Provisional 92.71
KOG2155|consensus 631 92.59
COG4770645 Acetyl/propionyl-CoA carboxylase, alpha subunit [L 91.61
COG1821307 Predicted ATP-utilizing enzyme (ATP-grasp superfam 91.43
TIGR02712 1201 urea_carbox urea carboxylase. Members of this fami 91.24
PF03133 292 TTL: Tubulin-tyrosine ligase family; InterPro: IPR 90.8
KOG0369|consensus 1176 90.53
PRK08654499 pyruvate carboxylase subunit A; Validated 89.82
COG0151428 PurD Phosphoribosylamine-glycine ligase [Nucleotid 89.61
PRK12815 1068 carB carbamoyl phosphate synthase large subunit; R 89.39
COG0439449 AccC Biotin carboxylase [Lipid metabolism] 89.28
PRK128151068 carB carbamoyl phosphate synthase large subunit; R 86.95
PF05770307 Ins134_P3_kin: Inositol 1, 3, 4-trisphosphate 5/6- 83.25
PF02786211 CPSase_L_D2: Carbamoyl-phosphate synthase L chain, 83.07
COG1038 1149 PycA Pyruvate carboxylase [Energy production and c 82.23
KOG0238|consensus670 81.1
COG2308488 Uncharacterized conserved protein [Function unknow 80.65
>KOG2156|consensus Back     alignment and domain information 
Probab=100.00  E-value=7.5e-51  Score=422.61  Aligned_cols=262  Identities=26%  Similarity=0.390  Sum_probs=222.6

Q ss_pred             CCcccCCccchHHhhHHHHHHHHhhhcccCCCchhhh--hhhh--hhhhhcCCcceEEEcCCCCCCCCceEEeCChHHHH
Q psy10923         25 PVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQ--KYIE--KPLLIHGVNVVRVLKPVANCSGHGIRIYRQLEDIK  100 (520)
Q Consensus        25 P~~~~~Grk~~L~~~l~~~~~~~~~~~~~~~P~~~~~--~~~~--~~~~~~~~~~~WI~KP~~~srG~GI~l~~~~~~I~  100 (520)
                      |++.-+|||++||++|.+++..++..++.|+|++++.  +..+  +-+. +.....|||||.+++||.||.++++++++.
T Consensus       253 PGsF~IGRKD~lW~~~~~~~~rf~~kef~fmPrtyilP~d~e~lrk~w~-~nasr~wIVkppasaRg~gIrv~~kw~q~p  331 (662)
T KOG2156|consen  253 PGSFRIGRKDRLWRNILRNQVRFGKKEFGFMPRTYILPADREELRKYWE-KNASRLWIVKPPASARGIGIRVINKWSQFP  331 (662)
T ss_pred             CCccccccchHHHHHHHHHHHHhcccccCccceeeeccccHHHHHHHHh-hCccccEEecCcccccCcceEeccchhhCC
Confidence            8999999999999999999999999999999999853  2222  2222 233445999999999999999999998876


Q ss_pred             HHHhhcccCCCCcceeeeccccccccccceeeeeEEEEEeeecCceEEEEecceEEeecCCCCCCc---cccccccchhh
Q psy10923        101 RAIGTLKNLTCPRCVVQKYIEKPLLIHGVKFDLRVWYVITNIDKFKIWVYHEGYVRFCSKPYSNIL---LDEARHLTNVR  177 (520)
Q Consensus       101 ~~~~~~~~~~~~~~VvQkYI~~PlLi~GrKFDlRvyVLvts~~PL~vY~y~~g~vRfat~~Y~~~n---ld~~~HLTN~s  177 (520)
                      +         .++.|||+||++|+||+|.|||+|+||+|||++||+||+|.+||+|||+++|+..+   .|.|||||||+
T Consensus       332 k---------~rpLvvQ~yieRP~ling~KFDlrlYv~vts~nPLRIy~y~dgL~RFasvkYsp~~a~~~dKymhltnYs  402 (662)
T KOG2156|consen  332 K---------DRPLVVQKYIERPLLINGSKFDLRLYVVVTSVNPLRIYIYNDGLVRFASVKYSPFDANNVDKYMHLTNYS  402 (662)
T ss_pred             C---------cccHHHHHHhhcceeecCcceeEEEEEEEeecCceEEEEeccceeeeccccCCcccccccceeEEecccc
Confidence            4         78999999999999999999999999999999999999999999999999999753   36899999999


Q ss_pred             hhhhcccCCC--CCCCCCCCccCHHhHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhHhhhhhccCccceeeecccCC
Q psy10923        178 IQKQYRNVRD--PPQLPAELMWDFKQLRDYFTKNMNLPRKWDMIMRAMEESIVTIMRCAQMWYVITNIDKFKIWVYHEGY  255 (520)
Q Consensus       178 iqk~~~~~~~--~~~~~~~~~ws~~~l~~~L~~~~g~~~~w~~I~~~Ik~ii~~t~~aa~~~~~~~~~~~Fe~~~~~~g~  255 (520)
                      ++|.+. |..  +-+.-.|++|++..++.|+.+ .|++.  ++||++|+++|+++|.|.+..+.-. ...+.    +..|
T Consensus       403 ~nke~~-ys~~k~~n~~~g~kwtl~~lw~~l~~-qGvdt--~kIW~qir~iV~kti~s~E~~i~~~-lr~~~----~~~~  473 (662)
T KOG2156|consen  403 PNKESN-YSLNKYFNACQGSKWTLKSLWLYLDN-QGVDT--DKIWEQIRNIVIKTIISGEKGINSM-LRNYV----ENPY  473 (662)
T ss_pred             ccccch-hhhhhHHhhcCCchhhHHHHHHHHHh-cCCCH--HHHHHHHHHHHHHHhhccChhHHHH-HHHHh----cCCc
Confidence            999765 331  112346999999999999998 89764  5999999999999999999887521 12221    1133


Q ss_pred             ccccccccc-ceeeccccccccccccceEEEEecCCCCCCCcC-cchh-hhhhhhhhHHHHH
Q psy10923        256 VRFCSKPYS-NILLDEARHLTNVRIQKQYRNVRDPPQLPADLG-DYNF-LNYISEMTDYVRR  314 (520)
Q Consensus       256 ~~~cfel~G-D~llD~~~kp~~~~~~~wLLEVN~sPsl~~~~~-d~~i-~~~i~~~~d~v~~  314 (520)
                        .|||++| ||+||++++|       ||||||.+||++..++ |-.+ .+||++++++++-
T Consensus       474 --~CfELfgFDiilDedLkp-------wLlEVNISPSLhS~tpld~~vk~~li~~vlNlagi  526 (662)
T KOG2156|consen  474 --SCFELFGFDIILDEDLKP-------WLLEVNISPSLHSETPLDCSVKAPLIQDVLNLAGI  526 (662)
T ss_pred             --hhhhhhcceEEecCccce-------eeEEEecccccccCCCccchhhhHHHHHHHHhcce
Confidence              6999999 9999999999       9999999999999988 8776 5999999998864

>PF03133 TTL: Tubulin-tyrosine ligase family; InterPro: IPR004344 Tubulins and microtubules are subjected to several post-translational modifications of which the reversible detyrosination/tyrosination of the carboxy-terminal end of most alpha-tubulins has been extensively analysed Back     alignment and domain information
>KOG2157|consensus Back     alignment and domain information
>KOG2158|consensus Back     alignment and domain information
>KOG2155|consensus Back     alignment and domain information
>PF14398 ATPgrasp_YheCD: YheC/D like ATP-grasp Back     alignment and domain information
>PF08443 RimK: RimK-like ATP-grasp domain; InterPro: IPR013651 This ATP-grasp domain is found in the ribosomal S6 modification enzyme RimK [] Back     alignment and domain information
>PRK10446 ribosomal protein S6 modification protein; Provisional Back     alignment and domain information
>TIGR00768 rimK_fam alpha-L-glutamate ligases, RimK family Back     alignment and domain information
>PF13535 ATP-grasp_4: ATP-grasp domain; PDB: 3VMM_A 3LN6_A 3LN7_B 2PN1_A 4DIM_A Back     alignment and domain information
>COG0189 RimK Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) [Coenzyme metabolism / Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PLN02941 inositol-tetrakisphosphate 1-kinase Back     alignment and domain information
>TIGR02144 LysX_arch Lysine biosynthesis enzyme LysX Back     alignment and domain information
>PF07478 Dala_Dala_lig_C: D-ala D-ala ligase C-terminus; InterPro: IPR011095 This entry represents the C-terminal, catalytic domain of the D-alanine--D-alanine ligase enzyme 6 Back     alignment and domain information
>PRK01372 ddl D-alanine--D-alanine ligase; Reviewed Back     alignment and domain information
>TIGR02291 rimK_rel_E_lig alpha-L-glutamate ligase-related protein Back     alignment and domain information
>PRK14568 vanB D-alanine--D-lactate ligase; Provisional Back     alignment and domain information
>PF14397 ATPgrasp_ST: Sugar-transfer associated ATP-grasp Back     alignment and domain information
>PRK14569 D-alanyl-alanine synthetase A; Provisional Back     alignment and domain information
>PRK01966 ddl D-alanyl-alanine synthetase A; Reviewed Back     alignment and domain information
>PRK14571 D-alanyl-alanine synthetase A; Provisional Back     alignment and domain information
>TIGR01205 D_ala_D_alaTIGR D-alanine--D-alanine ligase Back     alignment and domain information
>PRK14570 D-alanyl-alanine synthetase A; Provisional Back     alignment and domain information
>TIGR01161 purK phosphoribosylaminoimidazole carboxylase, PurK protein Back     alignment and domain information
>PF02655 ATP-grasp_3: ATP-grasp domain; InterPro: IPR003806 The ATP-grasp fold is one of several distinct ATP-binding folds, and is found in enzymes that catalyze the formation of amide bonds, catalyzing the ATP-dependent ligation of a carboxylate-containing molecule to an amino or thiol group-containing molecule [] Back     alignment and domain information
>TIGR03103 trio_acet_GNAT GNAT-family acetyltransferase TIGR03103 Back     alignment and domain information
>PRK13278 purP 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase; Provisional Back     alignment and domain information
>PRK14572 D-alanyl-alanine synthetase A; Provisional Back     alignment and domain information
>COG1181 DdlA D-alanine-D-alanine ligase and related ATP-grasp enzymes [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed Back     alignment and domain information
>KOG2157|consensus Back     alignment and domain information
>TIGR01142 purT phosphoribosylglycinamide formyltransferase 2 Back     alignment and domain information
>PRK07206 hypothetical protein; Provisional Back     alignment and domain information
>PLN02257 phosphoribosylamine--glycine ligase Back     alignment and domain information
>PF02955 GSH-S_ATP: Prokaryotic glutathione synthetase, ATP-grasp domain; InterPro: IPR004218 Prokaryotic glutathione synthetase 6 Back     alignment and domain information
>TIGR00877 purD phosphoribosylamine--glycine ligase Back     alignment and domain information
>PRK06524 biotin carboxylase-like protein; Validated Back     alignment and domain information
>PRK13789 phosphoribosylamine--glycine ligase; Provisional Back     alignment and domain information
>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated Back     alignment and domain information
>PRK00885 phosphoribosylamine--glycine ligase; Provisional Back     alignment and domain information
>PRK08462 biotin carboxylase; Validated Back     alignment and domain information
>TIGR01235 pyruv_carbox pyruvate carboxylase Back     alignment and domain information
>PRK05246 glutathione synthetase; Provisional Back     alignment and domain information
>PRK13790 phosphoribosylamine--glycine ligase; Provisional Back     alignment and domain information
>PRK14016 cyanophycin synthetase; Provisional Back     alignment and domain information
>PRK13277 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase-like protein; Provisional Back     alignment and domain information
>TIGR00514 accC acetyl-CoA carboxylase, biotin carboxylase subunit Back     alignment and domain information
>PRK02186 argininosuccinate lyase; Provisional Back     alignment and domain information
>TIGR01435 glu_cys_lig_rel glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type Back     alignment and domain information
>PRK08463 acetyl-CoA carboxylase subunit A; Validated Back     alignment and domain information
>PRK05294 carB carbamoyl phosphate synthase large subunit; Reviewed Back     alignment and domain information
>PRK06111 acetyl-CoA carboxylase biotin carboxylase subunit; Validated Back     alignment and domain information
>PRK12833 acetyl-CoA carboxylase biotin carboxylase subunit; Provisional Back     alignment and domain information
>PRK02471 bifunctional glutamate--cysteine ligase/glutathione synthetase; Provisional Back     alignment and domain information
>PRK12999 pyruvate carboxylase; Reviewed Back     alignment and domain information
>TIGR02068 cya_phycin_syn cyanophycin synthetase Back     alignment and domain information
>TIGR01380 glut_syn glutathione synthetase, prokaryotic Back     alignment and domain information
>PRK08591 acetyl-CoA carboxylase biotin carboxylase subunit; Validated Back     alignment and domain information
>PRK05586 biotin carboxylase; Validated Back     alignment and domain information
>PRK12458 glutathione synthetase; Provisional Back     alignment and domain information
>PRK06849 hypothetical protein; Provisional Back     alignment and domain information
>PRK07178 pyruvate carboxylase subunit A; Validated Back     alignment and domain information
>PLN02948 phosphoribosylaminoimidazole carboxylase Back     alignment and domain information
>PRK14573 bifunctional D-alanyl-alanine synthetase A/UDP-N-acetylmuramate--L-alanine ligase; Provisional Back     alignment and domain information
>TIGR01369 CPSaseII_lrg carbamoyl-phosphate synthase, large subunit Back     alignment and domain information
>PRK06395 phosphoribosylamine--glycine ligase; Provisional Back     alignment and domain information
>TIGR01369 CPSaseII_lrg carbamoyl-phosphate synthase, large subunit Back     alignment and domain information
>PLN02735 carbamoyl-phosphate synthase Back     alignment and domain information
>PRK05294 carB carbamoyl phosphate synthase large subunit; Reviewed Back     alignment and domain information
>PRK12767 carbamoyl phosphate synthase-like protein; Provisional Back     alignment and domain information
>PF01071 GARS_A: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; InterPro: IPR020561 Phosphoribosylglycinamide synthetase (6 Back     alignment and domain information
>PLN02735 carbamoyl-phosphate synthase Back     alignment and domain information
>PF14403 CP_ATPgrasp_2: Circularly permuted ATP-grasp type 2 Back     alignment and domain information
>PRK05784 phosphoribosylamine--glycine ligase; Provisional Back     alignment and domain information
>KOG2155|consensus Back     alignment and domain information
>COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid metabolism] Back     alignment and domain information
>COG1821 Predicted ATP-utilizing enzyme (ATP-grasp superfamily) [General function prediction only] Back     alignment and domain information
>TIGR02712 urea_carbox urea carboxylase Back     alignment and domain information
>PF03133 TTL: Tubulin-tyrosine ligase family; InterPro: IPR004344 Tubulins and microtubules are subjected to several post-translational modifications of which the reversible detyrosination/tyrosination of the carboxy-terminal end of most alpha-tubulins has been extensively analysed Back     alignment and domain information
>KOG0369|consensus Back     alignment and domain information
>PRK08654 pyruvate carboxylase subunit A; Validated Back     alignment and domain information
>COG0151 PurD Phosphoribosylamine-glycine ligase [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK12815 carB carbamoyl phosphate synthase large subunit; Reviewed Back     alignment and domain information
>COG0439 AccC Biotin carboxylase [Lipid metabolism] Back     alignment and domain information
>PRK12815 carB carbamoyl phosphate synthase large subunit; Reviewed Back     alignment and domain information
>PF05770 Ins134_P3_kin: Inositol 1, 3, 4-trisphosphate 5/6-kinase; InterPro: IPR008656 This entry represents inositol-tetrakisphosphate 1-kinase which is also called inositol 1,3,4-trisphosphate 5/6-kinase Back     alignment and domain information
>PF02786 CPSase_L_D2: Carbamoyl-phosphate synthase L chain, ATP binding domain; InterPro: IPR005479 Carbamoyl phosphate synthase (CPSase) is a heterodimeric enzyme composed of a small and a large subunit (with the exception of CPSase III, see below) Back     alignment and domain information
>COG1038 PycA Pyruvate carboxylase [Energy production and conversion] Back     alignment and domain information
>KOG0238|consensus Back     alignment and domain information
>COG2308 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query520
3tig_A380 Tubulin Tyrosine Ligase Length = 380 2e-09
4i4t_F384 Crystal Structure Of Tubulin-rb3-ttl-zampanolide Co 3e-09
>pdb|3TIG|A Chain A, Tubulin Tyrosine Ligase Length = 380 Back     alignment and structure 
Iteration: 1

 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 80/163 (49%), Gaps = 12/163 (7%)
Query: 76  VRVLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGV--KFDL 133
           V + K  +   G GI I     ++   I     +     V+QKY+E PLL+     KFD+
Sbjct: 149 VWIAKSSSGAKGEGILISSDATELLDFIDNQGQVH----VIQKYLESPLLLEPGHRKFDI 204
Query: 134 RVWYVITNIDKFKIWVYHEGYVRFCSKPYSNI-LLDEARHLTNVRIQKQYRNVRDPPQLP 192
           R W ++ N  ++ I++Y EG +R  S+PYS+    D   HLTN  IQK++       +  
Sbjct: 205 RSWVLVDN--QYNIYLYREGVLRTSSEPYSDTNFQDMTSHLTNHCIQKEHSKNYGRYEEG 262
Query: 193 AELMWDFKQLRDYFTKNMNLPRKWDMIMRAMEESIVTIMRCAQ 235
            E+   F++   Y   ++N+  + + I+  ++E I   + C +
Sbjct: 263 NEMF--FEEFNQYLVTSLNINLE-NSILCQIKEIIRVCLSCLE 302
>pdb|4I4T|F Chain F, Crystal Structure Of Tubulin-rb3-ttl-zampanolide Complex Length = 384 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query520
3tig_A380 TTL protein; ATP-grAsp, ligase, tubulin; 2.50A {Si 2e-30
3tig_A380 TTL protein; ATP-grAsp, ligase, tubulin; 2.50A {Si 2e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-05
>3tig_A TTL protein; ATP-grAsp, ligase, tubulin; 2.50A {Silurana} PDB: 3tii_A* 3tin_A* Length = 380 Back     alignment and structure
 Score =  121 bits (305), Expect = 2e-30
 Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 12/160 (7%)

Query: 79  LKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIH--GVKFDLRVW 136
            K  +   G GI I     ++   I           V+QKY+E PLL+     KFD+R W
Sbjct: 152 AKSSSGAKGEGILISSDATELLDFIDNQGQ----VHVIQKYLESPLLLEPGHRKFDIRSW 207

Query: 137 YVITNIDKFKIWVYHEGYVRFCSKPYSNI-LLDEARHLTNVRIQKQYRNVRDPPQLPAEL 195
            ++ N  ++ I++Y EG +R  S+PYS+    D   HLTN  IQK++    +  +     
Sbjct: 208 VLVDN--QYNIYLYREGVLRTSSEPYSDTNFQDMTSHLTNHCIQKEHSK--NYGRYEEGN 263

Query: 196 MWDFKQLRDYFTKNMNLPRKWDMIMRAMEESIVTIMRCAQ 235
              F++   Y   ++N     + I+  ++E I   + C +
Sbjct: 264 EMFFEEFNQYLVTSLN-INLENSILCQIKEIIRVCLSCLE 302
>3tig_A TTL protein; ATP-grAsp, ligase, tubulin; 2.50A {Silurana} PDB: 3tii_A* 3tin_A* Length = 380 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query520
3tig_A380 TTL protein; ATP-grAsp, ligase, tubulin; 2.50A {Si 100.0
1i7n_A309 Synapsin II; synapse, phosphorylation, neuropeptid 98.21
2p0a_A344 Synapsin-3, synapsin III; neurotransmitter release 98.14
1pk8_A422 RAT synapsin I; ATP binding, ATP grAsp, calcium (I 98.09
3se7_A346 VANA; alpha-beta structure, D-alanine-D-lactate li 97.93
1iow_A306 DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen pho 97.92
2r85_A334 PURP protein PF1517; ATP-grAsp superfamily, unknow 97.91
1e4e_A343 Vancomycin/teicoplanin A-type resistance protein; 97.86
2i87_A364 D-alanine-D-alanine ligase; APO; 2.00A {Staphyloco 97.82
4eg0_A317 D-alanine--D-alanine ligase; structural genomics, 97.78
2q7d_A346 Inositol-tetrakisphosphate 1-kinase; inositol kina 97.77
4fu0_A357 D-alanine--D-alanine ligase 7; vancomycin resistan 97.69
3tig_A 380 TTL protein; ATP-grAsp, ligase, tubulin; 2.50A {Si 97.68
3tqt_A372 D-alanine--D-alanine ligase; cell envelope; 1.88A 97.65
3e5n_A386 D-alanine-D-alanine ligase A; bacterial blight; 2. 97.64
2fb9_A322 D-alanine:D-alanine ligase; 1.90A {Thermus caldoph 97.61
3r5x_A307 D-alanine--D-alanine ligase; alpha-beta structure, 97.56
4dim_A403 Phosphoribosylglycinamide synthetase; structural g 97.49
3k3p_A383 D-alanine--D-alanine ligase; D-alanyl-alanine synt 97.44
3i12_A364 D-alanine-D-alanine ligase A; D-alanyl-alanine syn 97.41
1z2n_X324 Inositol 1,3,4-trisphosphate 5/6-kinase; inositol 97.39
3q2o_A389 Phosphoribosylaminoimidazole carboxylase, ATPase; 97.39
3k5i_A403 Phosphoribosyl-aminoimidazole carboxylase; purine 97.34
1uc8_A280 LYSX, lysine biosynthesis enzyme; alpha-aminoadipa 97.33
2pvp_A367 D-alanine-D-alanine ligase; 2.40A {Helicobacter py 97.32
1ehi_A377 LMDDL2, D-alanine:D-lactate ligase; ATP-binding. g 97.3
4e4t_A419 Phosphoribosylaminoimidazole carboxylase, ATPase; 97.3
1kjq_A391 GART 2, phosphoribosylglycinamide formyltransferas 97.15
2ip4_A417 PURD, phosphoribosylamine--glycine ligase; GAR syn 97.12
2vpq_A451 Acetyl-COA carboxylase; bacteria, ATP-grAsp domain 97.11
3ax6_A380 Phosphoribosylaminoimidazole carboxylase, ATPase; 97.1
3aw8_A369 PURK, phosphoribosylaminoimidazole carboxylase, AT 97.09
3lwb_A373 D-alanine--D-alanine ligase; DDL, D-alanyl--D-alan 97.09
3ouz_A446 Biotin carboxylase; structural genomics, center fo 97.07
3vot_A425 L-amino acid ligase, BL00235; ATP-grAsp motif, ATP 97.05
3lp8_A442 Phosphoribosylamine-glycine ligase; ssgcid, NIH, n 96.98
3orq_A377 N5-carboxyaminoimidazole ribonucleotide synthetas; 96.97
1ulz_A451 Pyruvate carboxylase N-terminal domain; biotin car 96.96
2dwc_A433 PH0318, 433AA long hypothetical phosphoribosylglyc 96.93
1vkz_A412 Phosphoribosylamine--glycine ligase; TM1250, struc 96.91
2z04_A365 Phosphoribosylaminoimidazole carboxylase ATPase su 96.87
3ln6_A750 Glutathione biosynthesis bifunctional protein GSH; 96.85
2yw2_A424 Phosphoribosylamine--glycine ligase; glycinamide r 96.83
2xcl_A422 Phosphoribosylamine--glycine ligase; GAR-SYN, ATP- 96.73
3jrx_A587 Acetyl-COA carboxylase 2; BC domain, soraphen A, a 96.7
2qk4_A452 Trifunctional purine biosynthetic protein adenosi; 96.69
3glk_A540 Acetyl-COA carboxylase 2; ATP binding, alternative 96.64
1w96_A554 ACC, acetyl-coenzyme A carboxylase; ligase, obesit 96.53
3mjf_A431 Phosphoribosylamine--glycine ligase; structural ge 96.52
2w70_A449 Biotin carboxylase; ligase, ATP-binding, fatty aci 96.52
2yrx_A451 Phosphoribosylglycinamide synthetase; glycinamide 96.48
3n6x_A474 Putative glutathionylspermidine synthase; domain o 96.45
3vmm_A474 Alanine-anticapsin ligase BACD; ATP-grAsp domain, 96.4
2dzd_A461 Pyruvate carboxylase; biotin carboxylase, ligase; 96.34
1gsa_A316 Glutathione synthetase; ligase; HET: ADP GSH; 2.00 96.14
3df7_A305 Putative ATP-grAsp superfamily protein; putative p 96.09
3ln7_A757 Glutathione biosynthesis bifunctional protein GSH; 95.9
3u9t_A675 MCC alpha, methylcrotonyl-COA carboxylase, alpha-s 95.88
3n6r_A681 Propionyl-COA carboxylase, alpha subunit; protein 95.36
1a9x_A1073 Carbamoyl phosphate synthetase (large chain); amid 95.03
2r7k_A361 5-formaminoimidazole-4-carboxamide-1-(beta)-D- rib 95.01
2cqy_A108 Propionyl-COA carboxylase alpha chain, mitochondri 95.0
3hbl_A 1150 Pyruvate carboxylase; TIM barrel, ligase; HET: BTI 94.9
1a9x_A 1073 Carbamoyl phosphate synthetase (large chain); amid 94.69
2qf7_A 1165 Pyruvate carboxylase protein; multi-domain, multi- 94.62
3eth_A355 Phosphoribosylaminoimidazole carboxylase ATPase su 94.11
3t7a_A330 Inositol pyrophosphate kinase; ATP-grAsp fold, tra 94.02
2pn1_A331 Carbamoylphosphate synthase large subunit; ZP_0053 91.88
3va7_A 1236 KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A 91.0
2vob_A652 Trypanothione synthetase; ligase; 2.3A {Leishmania 80.97
2io8_A619 Bifunctional glutathionylspermidine synthetase/ami 80.27
>3tig_A TTL protein; ATP-grAsp, ligase, tubulin; 2.50A {Silurana} PDB: 3tii_A* 3tin_A* Back     alignment and structure
Probab=100.00  E-value=1.5e-50  Score=421.65  Aligned_cols=252  Identities=21%  Similarity=0.306  Sum_probs=174.7

Q ss_pred             CCcccCCccchHHhhHHHHHHHHhhhcccCCCchhhh---hhh--------------------h---h-----hhhhcCC
Q psy10923         25 PVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQ---KYI--------------------E---K-----PLLIHGV   73 (520)
Q Consensus        25 P~~~~~Grk~~L~~~l~~~~~~~~~~~~~~~P~~~~~---~~~--------------------~---~-----~~~~~~~   73 (520)
                      |....++||+.|+++|.+++  .+.....|+|++++.   ++.                    +   .     ....+|.
T Consensus        69 Pg~~~l~rKd~L~~nl~~~~--~~~~~~~f~P~ty~L~P~~~~~p~~~~~~~~~~~~~~~~~~E~~~F~~~~~~~~~~~~  146 (380)
T 3tig_A           69 RGADKLCRKASLVKLIKTSP--ELTETCTWFPESYVIYPTNEKTPAMRARNGLPDLANAPRTDEREEFRSSFNKKKENEE  146 (380)
T ss_dssp             TTTHHHHSHHHHHHHHHHCH--HHHTTCTTSCCEEECCC------------------------CCHHHHHHHHHHHHTTC
T ss_pred             CCcccccccHHHHHHHHHhh--hcccccCcCCcceeeCccccccccccccccccccccccchhHHHHHHHHHHHhhhcCC
Confidence            34456889999999999854  344567788887642   110                    1   0     1123578


Q ss_pred             cceEEEcCCCCCCCCceEEeCChHHHHHHHhhcccCCCCcceeeecccccccc--ccceeeeeEEEEEeeecCceEEEEe
Q psy10923         74 NVVRVLKPVANCSGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLI--HGVKFDLRVWYVITNIDKFKIWVYH  151 (520)
Q Consensus        74 ~~~WI~KP~~~srG~GI~l~~~~~~I~~~~~~~~~~~~~~~VvQkYI~~PlLi--~GrKFDlRvyVLvts~~PL~vY~y~  151 (520)
                      +++||+||++++||+||.+++++++|.++++..    .+.+|||+||++|+||  +|+|||||+||||||  ||+||+|+
T Consensus       147 ~~~wI~KP~~~srG~GI~l~~~~~~i~~~~~~~----~~~~VvQkYI~~PlLi~~~grKFDlR~Yvlvts--~l~vy~y~  220 (380)
T 3tig_A          147 GNVWIAKSSSGAKGEGILISSDATELLDFIDNQ----GQVHVIQKYLESPLLLEPGHRKFDIRSWVLVDN--QYNIYLYR  220 (380)
T ss_dssp             CCCEEEEESCC----CCBCCSCSHHHHHHHHHH----TSCEEEEECCSSBCCBTTTTBCEEEEEEEEECT--TCCEEECS
T ss_pred             CCeEEEeCCccCCCCCEEEeCCHHHHHHHHhcc----CCcEEEEecccCceeecCCCceeEEEEEEEEcC--CCEEEEEc
Confidence            899999999999999999999999998876532    4689999999999999  999999999999998  99999999


Q ss_pred             cceEEeecCCCCCCccc-cccccchhhhhhhc-ccCCCCCCCCCCCccCHHhHHHHHHHhcCCchhHH-HHHHHHHHHHH
Q psy10923        152 EGYVRFCSKPYSNILLD-EARHLTNVRIQKQY-RNVRDPPQLPAELMWDFKQLRDYFTKNMNLPRKWD-MIMRAMEESIV  228 (520)
Q Consensus       152 ~g~vRfat~~Y~~~nld-~~~HLTN~siqk~~-~~~~~~~~~~~~~~ws~~~l~~~L~~~~g~~~~w~-~I~~~Ik~ii~  228 (520)
                      +|++|||+++|+.++++ .++||||+||||++ ++|..   .+.|++|++++|++||++..|.  .|. .|+++|+++|+
T Consensus       221 ~g~~Rfa~~~y~~~~~~~~~~HLTN~~iqk~~~~~y~~---~~~g~~~~~~~f~~yL~~~~~~--~~~~~i~~~I~~ii~  295 (380)
T 3tig_A          221 EGVLRTSSEPYSDTNFQDMTSHLTNHCIQKEHSKNYGR---YEEGNEMFFEEFNQYLVTSLNI--NLENSILCQIKEIIR  295 (380)
T ss_dssp             CCEEEECC-------------------------------------CCBCHHHHHHHHSTTSSC--CHHHHTHHHHHHHHH
T ss_pred             CCEEEecCCCcCccchhhhhhhcccccccccccccccc---ccCCCcCcHHHHHHHHHHhcCc--cHHHHHHHHHHHHHH
Confidence            99999999999999884 69999999999974 56652   3468999999999999885553  465 89999999999


Q ss_pred             HHHHHhHhhhhhccCccceeeecccCCccccccccc-ceeeccccccccccccceEEEEecCCCCCCCcCcchhhhhhhh
Q psy10923        229 TIMRCAQMWYVITNIDKFKIWVYHEGYVRFCSKPYS-NILLDEARHLTNVRIQKQYRNVRDPPQLPADLGDYNFLNYISE  307 (520)
Q Consensus       229 ~t~~aa~~~~~~~~~~~Fe~~~~~~g~~~~cfel~G-D~llD~~~kp~~~~~~~wLLEVN~sPsl~~~~~d~~i~~~i~~  307 (520)
                      +++.|+++.+...            +....|||+|| |||||++++|       ||||||.+|++++.    -+.+|+.+
T Consensus       296 ~~l~a~~~~i~~~------------~~~~~~FEl~G~D~lid~~l~~-------wllEVN~~P~~~q~----~i~~l~~~  352 (380)
T 3tig_A          296 VCLSCLEPAISTK------------YLPYHSFQLFGFDFMVDKNLKV-------WLIEVNGAPACAQK----LYAELCKG  352 (380)
T ss_dssp             HHHHHHHHHHCCT------------TSSSEECEEEEEEEEEBTTCCE-------EEEEEESSCCCCTT----THHHHHHH
T ss_pred             HHHHHHHHHhhhc------------ccCCceEEEEeEEEEEcCCCcE-------EEEEEeCCCCccHH----hHHHHHHH
Confidence            9999999887521            11236999999 9999999999       99999999999863    22456666


Q ss_pred             hhHHH
Q psy10923        308 MTDYV  312 (520)
Q Consensus       308 ~~d~v  312 (520)
                      ++++.
T Consensus       353 ~~~ia  357 (380)
T 3tig_A          353 IVDLA  357 (380)
T ss_dssp             HHHHT
T ss_pred             HHHHh
Confidence            65543
>1i7n_A Synapsin II; synapse, phosphorylation, neuropeptide; 1.90A {Rattus norvegicus} SCOP: c.30.1.5 d.142.1.3 PDB: 1i7l_A 1auv_A 1aux_A* Back     alignment and structure
>2p0a_A Synapsin-3, synapsin III; neurotransmitter release, schizophrenia, vesicle T structural genomics, structural genomics consortium, SGC, neuropeptide; HET: ANP; 1.90A {Homo sapiens} Back     alignment and structure
>1pk8_A RAT synapsin I; ATP binding, ATP grAsp, calcium (II) ION, membrane protein; HET: ATP; 2.10A {Rattus norvegicus} SCOP: c.30.1.5 d.142.1.3 PDB: 1px2_A* Back     alignment and structure
>3se7_A VANA; alpha-beta structure, D-alanine-D-lactate ligase, ligase; HET: ATP; 3.07A {} Back     alignment and structure
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A* Back     alignment and structure
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A* Back     alignment and structure
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B* Back     alignment and structure
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A* Back     alignment and structure
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A Back     alignment and structure
>2q7d_A Inositol-tetrakisphosphate 1-kinase; inositol kinase, ITPK1, inositol 1,3,4-5/6 phosphate, inositol phosphate, inositolphosphate; HET: ANP; 1.60A {Homo sapiens} PDB: 2qb5_A* 2odt_X Back     alignment and structure
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis} Back     alignment and structure
>3tig_A TTL protein; ATP-grAsp, ligase, tubulin; 2.50A {Silurana} PDB: 3tii_A* 3tin_A* Back     alignment and structure
>3tqt_A D-alanine--D-alanine ligase; cell envelope; 1.88A {Coxiella burnetii} Back     alignment and structure
>3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} PDB: 3r5f_A* 3rfc_A* Back     alignment and structure
>2fb9_A D-alanine:D-alanine ligase; 1.90A {Thermus caldophilus} PDB: 2zdh_A* 2yzg_A 2yzn_A* 2yzm_A* 2zdg_A* 2zdq_A* Back     alignment and structure
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A* Back     alignment and structure
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii} Back     alignment and structure
>3k3p_A D-alanine--D-alanine ligase; D-alanyl-alanine synthetase, ATP-binding, cell shape, cell W biogenesis/degradation, magnesium, manganese; 2.23A {Streptococcus mutans} Back     alignment and structure
>3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, A binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium} PDB: 3q1k_A* Back     alignment and structure
>1z2n_X Inositol 1,3,4-trisphosphate 5/6-kinase; inositol phosphate kinase, ATP-grAsp, transferase; HET: ADP; 1.20A {Entamoeba histolytica} PDB: 1z2o_X* 1z2p_X* Back     alignment and structure
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A* Back     alignment and structure
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A* Back     alignment and structure
>1uc8_A LYSX, lysine biosynthesis enzyme; alpha-aminoadipate pathway, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.00A {Thermus thermophilus} SCOP: c.30.1.6 d.142.1.7 PDB: 1uc9_A* Back     alignment and structure
>2pvp_A D-alanine-D-alanine ligase; 2.40A {Helicobacter pylori} Back     alignment and structure
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1 Back     alignment and structure
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A Back     alignment and structure
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A* Back     alignment and structure
>2ip4_A PURD, phosphoribosylamine--glycine ligase; GAR synthetase, purine nucleotid structural genomics, NPPSFA; 2.80A {Thermus thermophilus} Back     alignment and structure
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus} Back     alignment and structure
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima} Back     alignment and structure
>3aw8_A PURK, phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp; HET: AMP; 2.60A {Thermus thermophilus} Back     alignment and structure
>3lwb_A D-alanine--D-alanine ligase; DDL, D-alanyl--D-alanine ligase RV2981C, structural genomics, TB structural GENO consortium, TBSGC; 2.10A {Mycobacterium tuberculosis} Back     alignment and structure
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A* Back     alignment and structure
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis} Back     alignment and structure
>3lp8_A Phosphoribosylamine-glycine ligase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.15A {Ehrlichia chaffeensis} Back     alignment and structure
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A Back     alignment and structure
>1ulz_A Pyruvate carboxylase N-terminal domain; biotin carboxylase; 2.20A {Aquifex aeolicus} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 Back     alignment and structure
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A* Back     alignment and structure
>1vkz_A Phosphoribosylamine--glycine ligase; TM1250, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 Back     alignment and structure
>3ln6_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamyl cysteine ligase domain, ATP-grAsp domain, HYB enzyme; 2.95A {Streptococcus agalactiae serogroup V} Back     alignment and structure
>2yw2_A Phosphoribosylamine--glycine ligase; glycinamide ribonucleotide synthetase, GAR synthetase, ATP B purine nucleotide biosynthetic pathway; HET: ATP; 1.80A {Aquifex aeolicus} PDB: 2yya_A Back     alignment and structure
>2xcl_A Phosphoribosylamine--glycine ligase; GAR-SYN, ATP-grAsp, metal binding; HET: ANP; 2.10A {Bacillus subtilis} PDB: 2xd4_A* Back     alignment and structure
>3jrx_A Acetyl-COA carboxylase 2; BC domain, soraphen A, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase, lipid synthesis; HET: S1A; 2.50A {Homo sapiens} PDB: 3jrw_A* Back     alignment and structure
>2qk4_A Trifunctional purine biosynthetic protein adenosi; purine synthesis, enzyme, protein-ATP complex, structural GE structural genomics consortium, SGC; HET: ATP; 2.45A {Homo sapiens} Back     alignment and structure
>3glk_A Acetyl-COA carboxylase 2; ATP binding, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase, lipid synthesis, manganese; 2.10A {Homo sapiens} PDB: 3gid_A 2hjw_A 2yl2_A Back     alignment and structure
>1w96_A ACC, acetyl-coenzyme A carboxylase; ligase, obesity, diabetes, fatty acid metabolism, structure-based drug design; HET: S1A; 1.8A {Saccharomyces cerevisiae} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1w93_A Back     alignment and structure
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A Back     alignment and structure
>2w70_A Biotin carboxylase; ligase, ATP-binding, fatty acid biosynthesis, nucleotide-BIN lipid synthesis, ATP-grAsp domain, fragment screening; HET: L22; 1.77A {Escherichia coli} PDB: 1bnc_A 2j9g_A* 2v58_A* 2v59_A* 2v5a_A* 2vr1_A* 2w6m_A* 1dv1_A* 2w6o_A* 2w6n_A* 2w6q_A* 2w6z_A* 2w6p_A* 2w71_A* 3jzf_A* 3jzi_A* 3rv3_A* 3rup_A* 1dv2_A* 3rv4_A* ... Back     alignment and structure
>2yrx_A Phosphoribosylglycinamide synthetase; glycinamide ribonucleotide synthetase, GAR synthetase; HET: AMP; 1.90A {Geobacillus kaustophilus} PDB: 2yrw_A* 2ys6_A* 2ys7_A Back     alignment and structure
>3n6x_A Putative glutathionylspermidine synthase; domain of unknown function (DUF404), structural genomics; 2.35A {Methylobacillus flagellatus} Back     alignment and structure
>3vmm_A Alanine-anticapsin ligase BACD; ATP-grAsp domain, amino acid ligase, ATP binding; HET: ADP P0D; 2.50A {Bacillus subtilis} Back     alignment and structure
>2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans} Back     alignment and structure
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A Back     alignment and structure
>3df7_A Putative ATP-grAsp superfamily protein; putative protein, PSI-II, nysgrc., structural genomics, protein structure initiative; 1.87A {Archaeoglobus fulgidus} Back     alignment and structure
>3ln7_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamylcysteine ligase domain, ATP-grAsp domain, HYBR enzyme, ATP-binding; 3.20A {Pasteurella multocida} Back     alignment and structure
>3n6r_A Propionyl-COA carboxylase, alpha subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Ruegeria pomeroyi} Back     alignment and structure
>1a9x_A Carbamoyl phosphate synthetase (large chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: a.92.1.1 c.24.1.1 c.30.1.1 c.30.1.1 d.142.1.2 d.142.1.2 PDB: 1ce8_A* 1m6v_A* 1c30_A* 1bxr_A* 1c3o_A* 1cs0_A* 1jdb_B* 1kee_A* 1t36_A* Back     alignment and structure
>2r7k_A 5-formaminoimidazole-4-carboxamide-1-(beta)-D- ribofuranosyl 5'-monophosphate synthetase...; ATP-grAsp superfamily, ATP-binding; HET: ACP AMZ; 2.10A {Methanocaldococcus jannaschii} SCOP: c.30.1.8 d.142.1.9 PDB: 2r7l_A* 2r7m_A* 2r7n_A* Back     alignment and structure
>2cqy_A Propionyl-COA carboxylase alpha chain, mitochondrial; PCCA, B domain, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A* Back     alignment and structure
>1a9x_A Carbamoyl phosphate synthetase (large chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: a.92.1.1 c.24.1.1 c.30.1.1 c.30.1.1 d.142.1.2 d.142.1.2 PDB: 1ce8_A* 1m6v_A* 1c30_A* 1bxr_A* 1c3o_A* 1cs0_A* 1jdb_B* 1kee_A* 1t36_A* Back     alignment and structure
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A* Back     alignment and structure
>3eth_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; ATP-grAsp, purine biosynthesis, antimicrobial, ATP-binding, decarboxylase, lyase; HET: ATP; 1.60A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1b6r_A* 3etj_A* 1b6s_A* Back     alignment and structure
>3t7a_A Inositol pyrophosphate kinase; ATP-grAsp fold, transferase; HET: ADP; 1.70A {Homo sapiens} PDB: 3t9a_A* 3t9b_A* 3t9c_A* 3t9d_A* 3t9e_A* 3t9f_A* 4gb4_A* 4hn2_A* 3t54_A* 3t99_A* Back     alignment and structure
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum} Back     alignment and structure
>3va7_A KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A {Kluyveromyces lactis} Back     alignment and structure
>2vob_A Trypanothione synthetase; ligase; 2.3A {Leishmania major} PDB: 2vps_A 2vpm_A Back     alignment and structure
>2io8_A Bifunctional glutathionylspermidine synthetase/amidase; ligase, hydrolase; HET: ADP; 2.10A {Escherichia coli} SCOP: c.30.1.7 d.3.1.15 d.142.1.8 PDB: 2io7_A* 2io9_A* 2ioa_A* 2iob_A 3o98_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query520
d1i7na2206 Synapsin II {Rat (Rattus norvegicus) [TaxId: 10116 98.59
d1iowa2210 D-ala-D-ala ligase, C-domain {Escherichia coli, ge 98.16
d1e4ea2211 D-alanine:D-lactate ligase VanA, C-domain {Enteroc 97.89
d1ehia2228 D-alanine:D-lactate ligase VanA, C-domain {Leucono 97.89
d1ulza3214 Biotin carboxylase (BC), domain 2 {Aquifex aeolicu 97.4
d2r85a2235 5-formaminoimidazole-4-carboxamide ribonucleotide 97.37
d2r7ka2238 5-formaminoimidazole-4-carboxamide ribonucleotide 97.32
d1uc8a2192 Lysine biosynthesis enzyme LysX ATP-binding domain 97.1
d1vkza3220 Glycinamide ribonucleotide synthetase (GAR-syn), d 97.02
d1w96a3267 Acetyl-CoA carboxylase, BC-M subdomain {Baker's ye 96.99
d1gsoa3224 Glycinamide ribonucleotide synthetase (GAR-syn), d 96.95
d1gsaa2192 Prokaryotic glutathione synthetase, C-domain {Esch 95.84
d1kjqa3206 Glycinamide ribonucleotide transformylase PurT, do 94.25
d1a9xa6259 Carbamoyl phosphate synthetase (CPS), large subuni 85.05
d1a9xa5275 Carbamoyl phosphate synthetase (CPS), large subuni 84.56
>d1i7na2 d.142.1.3 (A:215-420) Synapsin II {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: ATP-grasp
superfamily: Glutathione synthetase ATP-binding domain-like
family: Synapsin C-terminal domain
domain: Synapsin II
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.59  E-value=7.9e-08  Score=89.32  Aligned_cols=98  Identities=16%  Similarity=0.120  Sum_probs=63.5

Q ss_pred             CCccchHHhhHHHHHHHHhhhcccCCCchhhhhhhhhhhhhcCCcceEEEcCCCCCCCCceEEeCChHHHHHHHhhcccC
Q psy10923         30 SGHGIRIYRQLEDIKRAIGTLKNLTCPRCVVQKYIEKPLLIHGVNVVRVLKPVANCSGHGIRIYRQLEDIKRAIGTLKNL  109 (520)
Q Consensus        30 ~Grk~~L~~~l~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~WI~KP~~~srG~GI~l~~~~~~I~~~~~~~~~~  109 (520)
                      +..|-..|..+..+.+.++.......+.+......   ......+...|+||..|+.|+||.++++.+++......... 
T Consensus         9 ~~dK~~v~~~l~~~~~~l~~~~~p~~~~~~~~~~~---~~~~~~~~PvVvKP~~g~~g~Gv~~v~~~~~l~~~~~~~~~-   84 (206)
T d1i7na2           9 FCDKPWVFAQMVAIFKTLGGEKFPLIEQTYYPNHR---EMLTLPTFPVVVKIGHAHSGMGKVKVENHYDFQDIASVVAL-   84 (206)
T ss_dssp             TSSHHHHHHHHHHHHHHHCTTTSCBCCCEEESSGG---GGSSCCCSSEEEEESSCSTTTTEEEECSHHHHHHHHHHHHH-
T ss_pred             hcCcHHHHHHHHHHhcccCCCccceeecccccchh---HHhhhcCCceEEecCCCCCCCCeEEEeecchhhhHHHHHhh-
Confidence            44555567766666666655433333332222111   11223455789999999999999999999888766553211 


Q ss_pred             CCCcceeeeccccccccccceeeeeEEEE
Q psy10923        110 TCPRCVVQKYIEKPLLIHGVKFDLRVWYV  138 (520)
Q Consensus       110 ~~~~~VvQkYI~~PlLi~GrKFDlRvyVL  138 (520)
                      ....++||+||..       ++|+|+.|+
T Consensus        85 ~~~~~~vqe~I~~-------~~dirv~vi  106 (206)
T d1i7na2          85 TQTYATAEPFIDA-------KYDIRVQKI  106 (206)
T ss_dssp             HTCCEEEEECCCE-------EEEEEEEEE
T ss_pred             ccCeEEEEEeecc-------cceEEEEEE
Confidence            1467999999953       479999887
>d1iowa2 d.142.1.1 (A:97-306) D-ala-D-ala ligase, C-domain {Escherichia coli, gene ddlB [TaxId: 562]} Back     information, alignment and structure
>d1e4ea2 d.142.1.1 (A:132-342) D-alanine:D-lactate ligase VanA, C-domain {Enterococcus faecium [TaxId: 1352]} Back     information, alignment and structure
>d1ehia2 d.142.1.1 (A:135-362) D-alanine:D-lactate ligase VanA, C-domain {Leuconostoc mesenteroides, Ddl2 [TaxId: 1245]} Back     information, alignment and structure
>d1ulza3 d.142.1.2 (A:115-328) Biotin carboxylase (BC), domain 2 {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d2r85a2 d.142.1.9 (A:100-334) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d2r7ka2 d.142.1.9 (A:124-361) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Methanocaldococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1uc8a2 d.142.1.7 (A:89-280) Lysine biosynthesis enzyme LysX ATP-binding domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1vkza3 d.142.1.2 (A:94-313) Glycinamide ribonucleotide synthetase (GAR-syn), domain 2 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1w96a3 d.142.1.2 (A:184-450) Acetyl-CoA carboxylase, BC-M subdomain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1gsoa3 d.142.1.2 (A:104-327) Glycinamide ribonucleotide synthetase (GAR-syn), domain 2 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1gsaa2 d.142.1.1 (A:123-314) Prokaryotic glutathione synthetase, C-domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1kjqa3 d.142.1.2 (A:113-318) Glycinamide ribonucleotide transformylase PurT, domain 2 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1a9xa6 d.142.1.2 (A:677-935) Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1a9xa5 d.142.1.2 (A:128-402) Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains {Escherichia coli [TaxId: 562]} Back     information, alignment and structure